Query 040732
Match_columns 541
No_of_seqs 429 out of 3003
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 18:08:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040732.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040732hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rp8_A Flavoprotein monooxygen 100.0 2.3E-41 7.7E-46 352.3 33.4 357 63-457 20-386 (407)
2 2qa1_A PGAE, polyketide oxygen 100.0 8.2E-41 2.8E-45 356.0 33.1 355 62-459 7-366 (500)
3 2qa2_A CABE, polyketide oxygen 100.0 1.1E-40 3.7E-45 355.0 32.7 353 64-459 10-367 (499)
4 3fmw_A Oxygenase; mithramycin, 100.0 6.4E-40 2.2E-44 353.7 26.2 375 65-479 48-431 (570)
5 2x3n_A Probable FAD-dependent 100.0 3.7E-40 1.3E-44 342.2 23.2 359 66-461 6-378 (399)
6 1pn0_A Phenol 2-monooxygenase; 100.0 6E-39 2.1E-43 352.2 27.9 349 65-443 7-426 (665)
7 1k0i_A P-hydroxybenzoate hydro 100.0 1.2E-38 4.1E-43 330.2 23.8 376 66-476 2-388 (394)
8 2dkh_A 3-hydroxybenzoate hydro 100.0 9.3E-38 3.2E-42 342.2 27.7 350 64-443 30-417 (639)
9 2r0c_A REBC; flavin adenine di 100.0 1.8E-37 6.2E-42 334.4 28.9 358 65-461 25-410 (549)
10 4hb9_A Similarities with proba 100.0 1.6E-38 5.6E-43 330.4 19.2 344 67-438 2-382 (412)
11 3c96_A Flavin-containing monoo 100.0 2.4E-37 8.2E-42 322.2 26.4 366 63-462 1-398 (410)
12 3ihg_A RDME; flavoenzyme, anth 100.0 1.8E-37 6.3E-42 334.0 24.8 371 65-470 4-402 (535)
13 2vou_A 2,6-dihydroxypyridine h 100.0 3.5E-36 1.2E-40 312.1 29.9 329 65-443 4-371 (397)
14 3e1t_A Halogenase; flavoprotei 100.0 6.1E-36 2.1E-40 320.1 30.2 357 65-447 6-376 (512)
15 3oz2_A Digeranylgeranylglycero 100.0 4.9E-36 1.7E-40 309.8 28.5 341 65-441 3-351 (397)
16 3alj_A 2-methyl-3-hydroxypyrid 100.0 1.5E-35 5E-40 305.4 28.4 323 65-433 10-343 (379)
17 3atr_A Conserved archaeal prot 100.0 2E-35 6.7E-40 311.7 29.8 404 64-508 4-434 (453)
18 2xdo_A TETX2 protein; tetracyc 100.0 2.7E-35 9.3E-40 305.4 29.9 338 64-443 24-389 (398)
19 3i3l_A Alkylhalidase CMLS; fla 100.0 8.4E-36 2.9E-40 322.1 25.6 360 63-448 20-391 (591)
20 3nix_A Flavoprotein/dehydrogen 100.0 8.3E-34 2.8E-38 296.4 29.9 339 65-432 4-351 (421)
21 3cgv_A Geranylgeranyl reductas 100.0 1.1E-33 3.8E-38 292.8 29.6 356 65-460 3-366 (397)
22 2pyx_A Tryptophan halogenase; 100.0 5.7E-31 1.9E-35 282.6 34.3 341 65-447 6-422 (526)
23 3c4a_A Probable tryptophan hyd 100.0 2.6E-32 8.9E-37 281.3 16.1 319 67-442 1-333 (381)
24 2gmh_A Electron transfer flavo 100.0 2.9E-30 9.9E-35 279.5 29.4 362 65-460 34-445 (584)
25 2weu_A Tryptophan 5-halogenase 100.0 6.2E-29 2.1E-33 266.1 31.4 340 66-452 2-419 (511)
26 2e4g_A Tryptophan halogenase; 100.0 1.1E-28 3.8E-33 266.0 29.8 338 65-448 24-438 (550)
27 2aqj_A Tryptophan halogenase, 100.0 5.5E-29 1.9E-33 267.9 27.2 335 65-448 4-407 (538)
28 3ihm_A Styrene monooxygenase A 99.9 1.2E-25 3.9E-30 235.2 22.0 326 65-436 21-374 (430)
29 2bry_A NEDD9 interacting prote 99.9 6.5E-23 2.2E-27 217.9 13.2 309 64-428 90-450 (497)
30 1yvv_A Amine oxidase, flavin-c 99.7 2.9E-17 9.8E-22 165.5 17.0 306 66-403 2-327 (336)
31 1ryi_A Glycine oxidase; flavop 99.6 4.3E-15 1.5E-19 152.3 14.3 194 181-401 159-361 (382)
32 2gag_B Heterotetrameric sarcos 99.6 3.5E-14 1.2E-18 146.6 20.1 197 182-401 170-374 (405)
33 1y56_B Sarcosine oxidase; dehy 99.6 4.2E-14 1.4E-18 144.9 20.2 197 182-401 145-354 (382)
34 3dme_A Conserved exported prot 99.6 2.2E-14 7.7E-19 145.9 16.2 185 64-256 2-220 (369)
35 2qcu_A Aerobic glycerol-3-phos 99.6 5.7E-14 1.9E-18 149.4 19.6 317 65-401 2-371 (501)
36 3ps9_A TRNA 5-methylaminomethy 99.5 4.9E-14 1.7E-18 155.4 16.9 178 64-253 270-480 (676)
37 3nyc_A D-arginine dehydrogenas 99.5 9.7E-14 3.3E-18 141.9 17.9 180 64-256 7-219 (381)
38 3da1_A Glycerol-3-phosphate de 99.5 2E-13 6.8E-18 146.9 20.8 74 182-256 166-242 (561)
39 3pvc_A TRNA 5-methylaminomethy 99.5 8.2E-14 2.8E-18 153.8 14.8 175 64-248 262-470 (689)
40 2gf3_A MSOX, monomeric sarcosi 99.5 7.7E-13 2.6E-17 135.7 20.9 67 181-254 145-213 (389)
41 3jsk_A Cypbp37 protein; octame 99.5 6.7E-13 2.3E-17 132.1 16.5 148 65-253 78-257 (344)
42 2oln_A NIKD protein; flavoprot 99.5 2.5E-12 8.4E-17 132.5 20.6 68 182-256 149-218 (397)
43 1qo8_A Flavocytochrome C3 fuma 99.5 2.6E-13 8.9E-18 146.4 12.6 69 184-253 248-318 (566)
44 1rp0_A ARA6, thiazole biosynth 99.4 1.2E-12 4E-17 128.7 14.9 148 65-253 38-197 (284)
45 1y0p_A Fumarate reductase flav 99.4 5.5E-13 1.9E-17 144.1 13.0 67 185-252 254-322 (571)
46 2rgh_A Alpha-glycerophosphate 99.4 1.6E-11 5.6E-16 132.2 23.8 72 183-255 185-259 (571)
47 3dje_A Fructosyl amine: oxygen 99.4 7.3E-12 2.5E-16 130.7 20.3 63 181-248 156-222 (438)
48 2cul_A Glucose-inhibited divis 99.4 8.1E-12 2.8E-16 118.8 15.6 132 65-255 2-133 (232)
49 2gjc_A Thiazole biosynthetic e 99.4 7.1E-12 2.4E-16 124.0 15.5 149 65-254 64-246 (326)
50 4at0_A 3-ketosteroid-delta4-5a 99.4 1.3E-12 4.6E-17 139.1 10.7 64 187-252 203-269 (510)
51 3v76_A Flavoprotein; structura 99.4 1E-12 3.6E-17 135.9 9.4 158 63-247 24-187 (417)
52 3axb_A Putative oxidoreductase 99.4 5.9E-11 2E-15 124.3 22.9 70 181-256 176-264 (448)
53 3kkj_A Amine oxidase, flavin-c 99.3 2.7E-11 9.2E-16 116.8 17.9 36 66-101 2-37 (336)
54 4dgk_A Phytoene dehydrogenase; 99.3 5.1E-11 1.8E-15 126.5 20.3 63 187-254 222-285 (501)
55 1c0p_A D-amino acid oxidase; a 99.3 6.6E-11 2.3E-15 120.2 19.4 37 63-99 3-39 (363)
56 2i0z_A NAD(FAD)-utilizing dehy 99.3 6.1E-12 2.1E-16 131.8 11.5 166 65-256 25-211 (447)
57 2zxi_A TRNA uridine 5-carboxym 99.3 3.1E-11 1.1E-15 129.0 16.2 157 65-252 26-185 (637)
58 3ces_A MNMG, tRNA uridine 5-ca 99.3 2.8E-11 9.7E-16 129.8 15.9 160 65-254 27-188 (651)
59 1kf6_A Fumarate reductase flav 99.3 3.6E-11 1.2E-15 130.1 16.2 69 186-254 134-204 (602)
60 3cp8_A TRNA uridine 5-carboxym 99.3 2.6E-11 8.9E-16 130.0 14.3 156 64-251 19-178 (641)
61 1d4d_A Flavocytochrome C fumar 99.2 2E-11 6.8E-16 131.7 11.8 68 185-253 254-323 (572)
62 3nlc_A Uncharacterized protein 99.2 6E-11 2.1E-15 126.2 14.8 61 183-248 217-278 (549)
63 3g3e_A D-amino-acid oxidase; F 99.2 1.1E-10 3.7E-15 118.1 15.5 164 67-248 1-187 (351)
64 1chu_A Protein (L-aspartate ox 99.2 5.2E-11 1.8E-15 127.4 12.4 64 187-250 139-211 (540)
65 3c4n_A Uncharacterized protein 99.2 8.5E-11 2.9E-15 121.4 13.4 106 181-298 167-284 (405)
66 3i6d_A Protoporphyrinogen oxid 99.2 2.8E-10 9.4E-15 119.6 17.5 77 66-145 5-87 (470)
67 3ka7_A Oxidoreductase; structu 99.2 8.2E-10 2.8E-14 114.5 20.5 59 186-250 196-255 (425)
68 2h88_A Succinate dehydrogenase 99.2 1.4E-10 4.7E-15 125.6 15.0 62 187-249 156-219 (621)
69 2gqf_A Hypothetical protein HI 99.2 5.9E-11 2E-15 122.2 11.5 155 64-247 2-168 (401)
70 2wdq_A Succinate dehydrogenase 99.2 1.2E-10 4E-15 125.8 13.7 63 186-249 143-208 (588)
71 2ywl_A Thioredoxin reductase r 99.2 1.3E-10 4.4E-15 105.7 11.9 117 67-255 2-118 (180)
72 3nrn_A Uncharacterized protein 99.1 6.3E-10 2.1E-14 115.4 16.8 59 187-254 190-249 (421)
73 2uzz_A N-methyl-L-tryptophan o 99.1 1.8E-10 6.2E-15 117.2 12.1 60 182-248 145-205 (372)
74 2bs2_A Quinol-fumarate reducta 99.1 3.4E-10 1.2E-14 123.3 14.6 62 187-249 159-222 (660)
75 3qj4_A Renalase; FAD/NAD(P)-bi 99.1 4.5E-10 1.5E-14 113.1 14.4 34 67-100 2-38 (342)
76 1pj5_A N,N-dimethylglycine oxi 99.1 5.2E-10 1.8E-14 126.1 14.6 70 181-256 146-217 (830)
77 4fk1_A Putative thioredoxin re 99.1 5.1E-10 1.7E-14 110.8 12.6 114 63-246 3-116 (304)
78 3ab1_A Ferredoxin--NADP reduct 99.1 4.1E-10 1.4E-14 114.2 11.4 126 63-253 11-137 (360)
79 4a9w_A Monooxygenase; baeyer-v 99.1 5.9E-10 2E-14 112.3 12.3 129 66-248 3-133 (357)
80 2e5v_A L-aspartate oxidase; ar 99.1 5.7E-10 1.9E-14 117.4 12.5 62 186-252 119-181 (472)
81 3gyx_A Adenylylsulfate reducta 99.1 5E-10 1.7E-14 122.0 12.5 66 184-249 164-235 (662)
82 2zbw_A Thioredoxin reductase; 99.1 5.9E-10 2E-14 111.7 12.0 124 65-254 4-128 (335)
83 3lov_A Protoporphyrinogen oxid 99.1 4.8E-09 1.7E-13 110.5 19.3 36 65-100 3-40 (475)
84 1jnr_A Adenylylsulfate reducta 99.1 9E-10 3.1E-14 120.2 14.0 64 186-249 151-220 (643)
85 3fbs_A Oxidoreductase; structu 99.0 1.3E-09 4.6E-14 106.8 12.7 113 66-249 2-114 (297)
86 3itj_A Thioredoxin reductase 1 99.0 8.3E-10 2.8E-14 110.5 10.2 122 63-248 19-143 (338)
87 2q0l_A TRXR, thioredoxin reduc 99.0 2.3E-09 7.7E-14 106.2 12.9 115 67-250 2-117 (311)
88 2gv8_A Monooxygenase; FMO, FAD 99.0 2E-09 7E-14 112.5 11.9 66 182-249 111-179 (447)
89 3cty_A Thioredoxin reductase; 99.0 3E-09 1E-13 105.9 12.4 116 62-248 12-127 (319)
90 2q7v_A Thioredoxin reductase; 99.0 1.9E-09 6.6E-14 107.5 10.7 117 64-248 6-124 (325)
91 3f8d_A Thioredoxin reductase ( 98.9 4.7E-09 1.6E-13 104.1 12.8 113 65-248 14-126 (323)
92 2bcg_G Secretory pathway GDP d 98.9 5E-07 1.7E-11 94.4 28.2 56 187-248 243-301 (453)
93 2ivd_A PPO, PPOX, protoporphyr 98.9 1.9E-08 6.7E-13 105.9 17.3 38 64-101 14-51 (478)
94 1vdc_A NTR, NADPH dependent th 98.9 1.1E-09 3.7E-14 109.6 7.1 120 65-249 7-126 (333)
95 4a5l_A Thioredoxin reductase; 98.9 5E-09 1.7E-13 103.8 10.3 120 63-246 1-120 (314)
96 3lzw_A Ferredoxin--NADP reduct 98.9 4.9E-09 1.7E-13 104.5 10.1 117 66-248 7-124 (332)
97 2a87_A TRXR, TR, thioredoxin r 98.9 5.1E-09 1.7E-13 105.0 9.7 116 63-248 11-127 (335)
98 1trb_A Thioredoxin reductase; 98.9 4.2E-09 1.4E-13 104.7 8.8 114 65-248 4-117 (320)
99 1w4x_A Phenylacetone monooxyge 98.8 1.2E-08 4.2E-13 109.2 12.5 141 64-250 14-157 (542)
100 3gwf_A Cyclohexanone monooxyge 98.8 7.6E-09 2.6E-13 110.5 10.7 137 65-250 7-150 (540)
101 1fl2_A Alkyl hydroperoxide red 98.8 1.2E-08 4E-13 100.9 9.9 113 66-248 1-116 (310)
102 3d1c_A Flavin-containing putat 98.8 2.1E-08 7.1E-13 101.7 11.9 138 66-248 4-144 (369)
103 3s5w_A L-ornithine 5-monooxyge 98.8 2.9E-08 9.9E-13 104.1 12.7 65 183-248 124-193 (463)
104 4ap3_A Steroid monooxygenase; 98.8 1.3E-08 4.3E-13 109.0 10.0 140 64-249 19-161 (549)
105 2xve_A Flavin-containing monoo 98.8 5.6E-08 1.9E-12 102.0 13.9 67 183-250 98-169 (464)
106 3k7m_X 6-hydroxy-L-nicotine ox 98.7 2.1E-07 7.3E-12 96.4 17.7 34 67-100 2-35 (431)
107 3g5s_A Methylenetetrahydrofola 98.7 4.5E-08 1.5E-12 97.9 11.5 118 67-213 2-125 (443)
108 3p1w_A Rabgdi protein; GDI RAB 98.7 3.7E-08 1.3E-12 102.6 11.2 56 186-246 256-313 (475)
109 1v59_A Dihydrolipoamide dehydr 98.7 1.1E-08 3.6E-13 108.0 7.1 36 64-99 3-38 (478)
110 1hyu_A AHPF, alkyl hydroperoxi 98.7 3.2E-08 1.1E-12 105.4 10.4 115 64-248 210-327 (521)
111 3uox_A Otemo; baeyer-villiger 98.7 2.2E-08 7.6E-13 107.0 9.0 139 65-249 8-149 (545)
112 4gcm_A TRXR, thioredoxin reduc 98.7 4.8E-08 1.6E-12 96.7 10.9 34 65-98 5-38 (312)
113 3l8k_A Dihydrolipoyl dehydroge 98.7 2E-08 7E-13 105.4 8.5 36 64-99 2-37 (466)
114 2a8x_A Dihydrolipoyl dehydroge 98.7 1.9E-08 6.5E-13 105.6 8.2 143 66-250 3-149 (464)
115 1dxl_A Dihydrolipoamide dehydr 98.7 2.4E-08 8E-13 105.1 8.9 37 64-100 4-40 (470)
116 3nks_A Protoporphyrinogen oxid 98.7 8E-08 2.7E-12 101.1 12.1 35 67-101 3-39 (477)
117 3urh_A Dihydrolipoyl dehydroge 98.7 7.1E-08 2.4E-12 102.0 11.3 36 64-99 23-58 (491)
118 1ojt_A Surface protein; redox- 98.7 1.7E-08 5.8E-13 106.5 6.3 37 63-99 3-39 (482)
119 3r9u_A Thioredoxin reductase; 98.7 9.5E-08 3.3E-12 94.3 11.1 112 65-246 3-117 (315)
120 2vvm_A Monoamine oxidase N; FA 98.6 2.6E-07 8.8E-12 97.7 14.8 57 187-248 256-313 (495)
121 1s3e_A Amine oxidase [flavin-c 98.6 3.1E-07 1E-11 97.8 15.3 38 64-101 2-39 (520)
122 3pl8_A Pyranose 2-oxidase; sub 98.6 1.1E-07 3.7E-12 103.2 11.8 52 200-251 273-328 (623)
123 3qfa_A Thioredoxin reductase 1 98.6 5.5E-08 1.9E-12 103.5 9.0 38 62-99 28-65 (519)
124 3lxd_A FAD-dependent pyridine 98.6 3.3E-07 1.1E-11 94.6 14.3 58 187-249 195-253 (415)
125 1ebd_A E3BD, dihydrolipoamide 98.6 6.6E-08 2.3E-12 101.2 8.5 33 66-98 3-35 (455)
126 1zk7_A HGII, reductase, mercur 98.6 1.6E-07 5.3E-12 98.7 11.2 36 63-98 1-36 (467)
127 3o0h_A Glutathione reductase; 98.6 1.2E-07 4.2E-12 99.9 10.4 57 187-249 233-290 (484)
128 1zmd_A Dihydrolipoyl dehydroge 98.6 1.1E-07 3.9E-12 99.9 10.1 35 65-99 5-39 (474)
129 1d5t_A Guanine nucleotide diss 98.6 8E-07 2.7E-11 92.3 15.8 56 187-248 235-291 (433)
130 3dgz_A Thioredoxin reductase 2 98.5 8.6E-08 2.9E-12 101.3 7.7 36 64-99 4-39 (488)
131 3fg2_P Putative rubredoxin red 98.5 1.3E-06 4.5E-11 89.8 16.1 57 187-248 185-242 (404)
132 3lad_A Dihydrolipoamide dehydr 98.5 1.4E-07 4.9E-12 99.3 8.5 35 65-99 2-36 (476)
133 1q1r_A Putidaredoxin reductase 98.5 1.4E-07 4.7E-12 98.0 8.0 36 65-100 3-40 (431)
134 3h8l_A NADH oxidase; membrane 98.5 1.6E-07 5.5E-12 96.8 8.1 33 67-99 2-37 (409)
135 3qvp_A Glucose oxidase; oxidor 98.5 6.9E-07 2.4E-11 95.7 12.3 52 197-248 237-294 (583)
136 2qae_A Lipoamide, dihydrolipoy 98.5 2.8E-07 9.7E-12 96.8 8.7 34 66-99 2-35 (468)
137 3iwa_A FAD-dependent pyridine 98.5 3.9E-07 1.3E-11 95.8 9.7 35 66-100 3-39 (472)
138 3dgh_A TRXR-1, thioredoxin red 98.4 2.9E-07 1E-11 97.1 8.7 35 64-98 7-41 (483)
139 3sx6_A Sulfide-quinone reducta 98.4 2.4E-07 8.3E-12 96.4 7.7 34 66-99 4-40 (437)
140 3cgb_A Pyridine nucleotide-dis 98.4 2.1E-07 7.1E-12 98.1 6.9 35 66-100 36-72 (480)
141 3q9t_A Choline dehydrogenase a 98.4 9.8E-07 3.3E-11 94.6 12.1 52 197-248 216-271 (577)
142 1xdi_A RV3303C-LPDA; reductase 98.4 4E-07 1.4E-11 96.4 9.0 34 66-99 2-38 (499)
143 2hqm_A GR, grase, glutathione 98.4 6.4E-07 2.2E-11 94.3 9.9 36 64-99 9-44 (479)
144 1nhp_A NADH peroxidase; oxidor 98.4 2.5E-07 8.5E-12 96.6 6.7 33 67-99 1-35 (447)
145 2yqu_A 2-oxoglutarate dehydrog 98.3 8.7E-07 3E-11 92.6 9.3 34 66-99 1-34 (455)
146 3ics_A Coenzyme A-disulfide re 98.3 1.5E-06 5E-11 94.1 11.2 37 64-100 34-72 (588)
147 2cdu_A NADPH oxidase; flavoenz 98.3 4.9E-07 1.7E-11 94.4 7.2 34 67-100 1-36 (452)
148 3fpz_A Thiazole biosynthetic e 98.3 3.9E-07 1.3E-11 90.8 6.0 37 65-101 64-102 (326)
149 3dk9_A Grase, GR, glutathione 98.3 8.2E-07 2.8E-11 93.5 8.6 35 64-98 18-52 (478)
150 4b63_A L-ornithine N5 monooxyg 98.3 2.9E-06 1E-10 89.7 12.5 63 182-245 141-212 (501)
151 3klj_A NAD(FAD)-dependent dehy 98.3 8.7E-07 3E-11 90.5 8.1 36 65-100 8-43 (385)
152 3oc4_A Oxidoreductase, pyridin 98.3 1.1E-06 3.7E-11 91.8 9.1 34 67-100 3-38 (452)
153 1mo9_A ORF3; nucleotide bindin 98.3 9.8E-07 3.3E-11 94.0 8.6 38 62-99 39-76 (523)
154 2bc0_A NADH oxidase; flavoprot 98.3 4.8E-07 1.7E-11 95.5 6.0 35 65-99 34-71 (490)
155 3kd9_A Coenzyme A disulfide re 98.3 1.8E-06 6.2E-11 90.0 9.4 35 66-100 3-39 (449)
156 3h28_A Sulfide-quinone reducta 98.3 5.3E-07 1.8E-11 93.6 5.1 33 67-99 3-37 (430)
157 4dna_A Probable glutathione re 98.3 1.5E-06 5.2E-11 91.0 8.6 34 65-98 4-37 (463)
158 2eq6_A Pyruvate dehydrogenase 98.3 4.6E-06 1.6E-10 87.4 12.2 102 66-249 169-273 (464)
159 2eq6_A Pyruvate dehydrogenase 98.2 1.5E-06 5E-11 91.1 7.7 34 66-99 6-39 (464)
160 4b1b_A TRXR, thioredoxin reduc 98.2 3.2E-06 1.1E-10 89.9 10.4 35 65-99 41-75 (542)
161 1gpe_A Protein (glucose oxidas 98.2 6.5E-06 2.2E-10 88.7 12.7 54 196-249 240-299 (587)
162 3fim_B ARYL-alcohol oxidase; A 98.2 1.7E-06 5.7E-11 92.5 7.8 57 191-247 212-276 (566)
163 3t37_A Probable dehydrogenase; 98.2 3.2E-06 1.1E-10 90.0 10.0 60 188-248 212-272 (526)
164 3hyw_A Sulfide-quinone reducta 98.2 8.1E-07 2.8E-11 92.2 5.2 32 68-99 4-37 (430)
165 2v3a_A Rubredoxin reductase; a 98.2 9.2E-06 3.2E-10 82.8 13.1 100 66-249 145-245 (384)
166 1fec_A Trypanothione reductase 98.2 5.6E-06 1.9E-10 87.3 11.7 33 65-97 2-35 (490)
167 2x8g_A Thioredoxin glutathione 98.2 9E-06 3.1E-10 88.0 13.6 35 64-98 105-139 (598)
168 2yqu_A 2-oxoglutarate dehydrog 98.2 5.7E-06 2E-10 86.4 11.6 99 66-249 167-266 (455)
169 2jbv_A Choline oxidase; alcoho 98.2 7.5E-06 2.6E-10 87.4 12.5 57 190-246 212-272 (546)
170 2wpf_A Trypanothione reductase 98.2 1.5E-06 5E-11 91.9 6.8 35 63-97 4-39 (495)
171 1xhc_A NADH oxidase /nitrite r 98.2 2.5E-06 8.4E-11 86.5 7.2 35 65-100 7-41 (367)
172 4gut_A Lysine-specific histone 98.1 2.2E-06 7.7E-11 94.9 7.3 38 64-101 334-371 (776)
173 4gde_A UDP-galactopyranose mut 98.1 8.7E-07 3E-11 93.9 3.9 38 65-102 9-47 (513)
174 3ntd_A FAD-dependent pyridine 98.1 5E-06 1.7E-10 89.4 9.7 34 67-100 2-37 (565)
175 2e1m_A L-glutamate oxidase; L- 98.1 3.6E-06 1.2E-10 85.1 7.8 37 64-100 42-79 (376)
176 3ef6_A Toluene 1,2-dioxygenase 98.1 1.9E-06 6.3E-11 88.8 5.8 34 67-100 3-38 (410)
177 2gqw_A Ferredoxin reductase; f 98.1 6.4E-06 2.2E-10 84.7 9.8 36 65-100 6-43 (408)
178 1y56_A Hypothetical protein PH 98.1 3.5E-06 1.2E-10 88.9 7.8 35 65-100 107-141 (493)
179 1lvl_A Dihydrolipoamide dehydr 98.1 5.4E-06 1.8E-10 86.7 8.9 34 65-98 4-37 (458)
180 1nhp_A NADH peroxidase; oxidor 98.1 1.9E-05 6.5E-10 82.2 12.4 100 65-249 148-248 (447)
181 1trb_A Thioredoxin reductase; 98.1 4E-05 1.4E-09 75.6 14.0 100 66-247 145-247 (320)
182 1sez_A Protoporphyrinogen oxid 98.1 5E-06 1.7E-10 87.9 7.6 39 63-101 10-48 (504)
183 2r9z_A Glutathione amide reduc 98.0 2.4E-05 8.1E-10 81.9 12.4 100 66-249 166-266 (463)
184 3vrd_B FCCB subunit, flavocyto 98.0 1.2E-05 4.3E-10 82.2 10.0 33 67-99 3-37 (401)
185 4g6h_A Rotenone-insensitive NA 98.0 6.1E-06 2.1E-10 87.2 7.5 36 64-99 40-75 (502)
186 2gag_A Heterotetrameric sarcos 98.0 2.1E-05 7.1E-10 89.7 12.2 35 65-99 127-161 (965)
187 1ges_A Glutathione reductase; 98.0 1.9E-05 6.7E-10 82.2 10.5 100 66-249 167-267 (450)
188 1ebd_A E3BD, dihydrolipoamide 98.0 3.7E-05 1.3E-09 80.2 12.6 102 66-249 170-272 (455)
189 1v0j_A UDP-galactopyranose mut 98.0 4.4E-06 1.5E-10 85.7 5.2 39 63-101 4-43 (399)
190 1fl2_A Alkyl hydroperoxide red 98.0 6.3E-05 2.2E-09 73.8 13.4 96 66-246 144-241 (310)
191 3ab1_A Ferredoxin--NADP reduct 98.0 5E-05 1.7E-09 76.4 12.6 100 66-247 163-263 (360)
192 2jae_A L-amino acid oxidase; o 98.0 6.5E-06 2.2E-10 86.7 6.0 38 64-101 9-46 (489)
193 2q0l_A TRXR, thioredoxin reduc 97.9 0.00011 3.7E-09 72.1 14.4 96 66-246 143-240 (311)
194 2b9w_A Putative aminooxidase; 97.9 7.4E-06 2.5E-10 84.6 6.1 37 65-101 5-42 (424)
195 3hdq_A UDP-galactopyranose mut 97.9 7E-06 2.4E-10 83.7 5.4 38 64-101 27-64 (397)
196 1mo9_A ORF3; nucleotide bindin 97.9 5.7E-05 2E-09 80.2 12.6 102 67-249 215-318 (523)
197 2qae_A Lipoamide, dihydrolipoy 97.9 6E-05 2.1E-09 78.9 12.3 103 66-249 174-278 (468)
198 4eqs_A Coenzyme A disulfide re 97.9 3E-05 1E-09 80.4 9.9 32 68-99 2-35 (437)
199 1v59_A Dihydrolipoamide dehydr 97.9 5.6E-05 1.9E-09 79.3 12.0 105 66-250 183-290 (478)
200 1lvl_A Dihydrolipoamide dehydr 97.9 2.3E-05 7.7E-10 81.9 8.9 99 66-249 171-270 (458)
201 3r9u_A Thioredoxin reductase; 97.9 9.6E-05 3.3E-09 72.5 12.7 96 66-246 147-243 (315)
202 1rsg_A FMS1 protein; FAD bindi 97.9 5.8E-06 2E-10 87.8 4.1 37 65-101 7-44 (516)
203 3itj_A Thioredoxin reductase 1 97.9 0.00011 3.6E-09 72.9 12.9 96 66-246 173-270 (338)
204 3ic9_A Dihydrolipoamide dehydr 97.8 0.00014 4.7E-09 76.6 13.7 101 66-248 174-275 (492)
205 2hqm_A GR, grase, glutathione 97.8 6.3E-05 2.1E-09 79.0 11.0 101 66-249 185-287 (479)
206 1q1r_A Putidaredoxin reductase 97.8 8.9E-05 3.1E-09 76.7 12.0 100 66-248 149-251 (431)
207 2yg5_A Putrescine oxidase; oxi 97.8 8.1E-06 2.8E-10 85.0 4.0 37 65-101 4-40 (453)
208 2a8x_A Dihydrolipoyl dehydroge 97.8 8.1E-05 2.8E-09 77.8 11.7 101 66-248 171-272 (464)
209 3urh_A Dihydrolipoyl dehydroge 97.8 0.00014 4.7E-09 76.6 13.4 103 66-249 198-302 (491)
210 3s5w_A L-ornithine 5-monooxyge 97.8 8.9E-05 3E-09 77.4 11.8 147 66-247 227-377 (463)
211 3ic9_A Dihydrolipoamide dehydr 97.8 7.7E-06 2.6E-10 86.3 3.6 34 66-99 8-41 (492)
212 1onf_A GR, grase, glutathione 97.8 0.0001 3.5E-09 77.8 12.3 101 66-249 176-277 (500)
213 3cty_A Thioredoxin reductase; 97.8 0.00012 4.2E-09 72.1 12.2 96 66-247 155-252 (319)
214 2r9z_A Glutathione amide reduc 97.8 1.1E-05 3.9E-10 84.3 4.9 35 64-98 2-36 (463)
215 2zbw_A Thioredoxin reductase; 97.8 0.00022 7.6E-09 70.7 13.6 99 66-247 152-252 (335)
216 1zmd_A Dihydrolipoyl dehydroge 97.8 0.00011 3.9E-09 76.9 12.0 103 66-249 178-284 (474)
217 1i8t_A UDP-galactopyranose mut 97.8 1.3E-05 4.6E-10 81.1 4.6 35 67-101 2-36 (367)
218 1ges_A Glutathione reductase; 97.8 1.1E-05 3.9E-10 84.0 4.2 35 64-98 2-36 (450)
219 1xdi_A RV3303C-LPDA; reductase 97.8 9.7E-05 3.3E-09 78.0 11.4 99 66-249 182-281 (499)
220 1ojt_A Surface protein; redox- 97.8 6.9E-05 2.3E-09 78.8 10.0 101 66-249 185-288 (482)
221 2q7v_A Thioredoxin reductase; 97.8 0.00029 9.9E-09 69.6 14.1 95 66-246 152-248 (325)
222 1dxl_A Dihydrolipoamide dehydr 97.8 3.8E-05 1.3E-09 80.4 8.0 103 66-249 177-281 (470)
223 2cdu_A NADPH oxidase; flavoenz 97.8 0.00017 5.9E-09 75.0 12.9 100 66-249 149-249 (452)
224 2bi7_A UDP-galactopyranose mut 97.8 2.1E-05 7.1E-10 80.2 5.5 36 66-101 3-38 (384)
225 3lad_A Dihydrolipoamide dehydr 97.7 0.00027 9.1E-09 74.1 14.2 101 66-248 180-281 (476)
226 2gqw_A Ferredoxin reductase; f 97.7 0.00021 7.2E-09 73.3 12.6 95 66-248 145-240 (408)
227 3ef6_A Toluene 1,2-dioxygenase 97.7 8.4E-05 2.9E-09 76.4 9.6 99 66-248 143-242 (410)
228 2vdc_G Glutamate synthase [NAD 97.7 2.7E-05 9.1E-10 81.2 5.8 37 64-100 120-156 (456)
229 2iid_A L-amino-acid oxidase; f 97.7 2.1E-05 7.1E-10 83.0 5.0 38 64-101 31-68 (498)
230 1vdc_A NTR, NADPH dependent th 97.7 0.00038 1.3E-08 68.9 14.0 97 65-246 158-258 (333)
231 1fec_A Trypanothione reductase 97.7 0.00014 4.9E-09 76.5 11.3 100 66-249 187-290 (490)
232 3oc4_A Oxidoreductase, pyridin 97.7 0.00025 8.6E-09 73.7 13.0 99 66-249 147-246 (452)
233 2wpf_A Trypanothione reductase 97.7 0.00015 5E-09 76.5 11.1 100 66-249 191-294 (495)
234 2bc0_A NADH oxidase; flavoprot 97.7 0.00027 9.2E-09 74.4 13.1 99 65-248 193-292 (490)
235 3ntd_A FAD-dependent pyridine 97.7 0.00026 8.7E-09 75.9 13.2 34 66-99 151-184 (565)
236 4dsg_A UDP-galactopyranose mut 97.7 3.3E-05 1.1E-09 81.2 5.9 37 65-101 8-45 (484)
237 1onf_A GR, grase, glutathione 97.7 2.9E-05 9.8E-10 82.1 5.2 34 66-99 2-35 (500)
238 3k30_A Histamine dehydrogenase 97.7 3.1E-05 1.1E-09 85.2 5.6 37 63-99 388-424 (690)
239 1kdg_A CDH, cellobiose dehydro 97.7 2.6E-05 8.9E-10 83.4 4.7 59 190-248 199-262 (546)
240 3dgz_A Thioredoxin reductase 2 97.6 0.00051 1.7E-08 72.2 14.3 102 66-248 185-288 (488)
241 3iwa_A FAD-dependent pyridine 97.6 0.0003 1E-08 73.6 12.2 99 66-248 159-259 (472)
242 2v3a_A Rubredoxin reductase; a 97.6 4E-05 1.4E-09 78.0 5.2 36 64-99 2-39 (384)
243 1hyu_A AHPF, alkyl hydroperoxi 97.6 0.00031 1.1E-08 74.5 12.3 96 66-246 355-452 (521)
244 3cgb_A Pyridine nucleotide-dis 97.6 0.00034 1.1E-08 73.4 12.2 98 65-248 185-283 (480)
245 1m6i_A Programmed cell death p 97.6 0.00032 1.1E-08 73.8 11.6 99 66-248 180-283 (493)
246 3dgh_A TRXR-1, thioredoxin red 97.6 0.00051 1.7E-08 72.1 12.9 102 66-248 187-290 (483)
247 4b1b_A TRXR, thioredoxin reduc 97.6 0.0007 2.4E-08 71.8 13.9 99 65-249 222-321 (542)
248 3dk9_A Grase, GR, glutathione 97.5 0.00059 2E-08 71.5 13.1 34 66-99 187-220 (478)
249 1xhc_A NADH oxidase /nitrite r 97.5 0.00027 9.2E-09 71.4 9.8 33 67-99 144-176 (367)
250 4dna_A Probable glutathione re 97.5 0.00042 1.4E-08 72.3 11.4 98 66-248 170-269 (463)
251 1o94_A Tmadh, trimethylamine d 97.5 7.2E-05 2.5E-09 82.7 5.7 37 64-100 387-423 (729)
252 3f8d_A Thioredoxin reductase ( 97.5 0.00075 2.6E-08 66.2 12.4 97 65-247 153-251 (323)
253 3qfa_A Thioredoxin reductase 1 97.5 0.0011 3.8E-08 70.2 14.3 33 66-98 210-242 (519)
254 1ju2_A HydroxynitrIle lyase; f 97.5 3.5E-05 1.2E-09 82.0 2.7 49 199-247 206-261 (536)
255 1b37_A Protein (polyamine oxid 97.5 7.6E-05 2.6E-09 78.2 5.1 37 65-101 3-40 (472)
256 1zk7_A HGII, reductase, mercur 97.5 0.00049 1.7E-08 71.9 11.3 97 66-249 176-273 (467)
257 2x8g_A Thioredoxin glutathione 97.5 0.0012 4.1E-08 71.2 14.7 33 66-98 286-318 (598)
258 1ps9_A 2,4-dienoyl-COA reducta 97.5 0.0001 3.4E-09 80.8 6.0 36 64-99 371-406 (671)
259 1m6i_A Programmed cell death p 97.4 6.5E-05 2.2E-09 79.2 4.1 39 63-101 8-48 (493)
260 2z3y_A Lysine-specific histone 97.4 0.00011 3.9E-09 80.2 5.9 39 63-101 104-142 (662)
261 3ics_A Coenzyme A-disulfide re 97.4 0.00091 3.1E-08 72.0 12.4 96 66-248 187-283 (588)
262 2xag_A Lysine-specific histone 97.4 0.00015 5.2E-09 80.9 6.2 38 64-101 276-313 (852)
263 3l8k_A Dihydrolipoyl dehydroge 97.4 0.001 3.5E-08 69.4 12.3 34 66-99 172-205 (466)
264 2a87_A TRXR, TR, thioredoxin r 97.4 0.00075 2.6E-08 66.9 10.5 34 66-99 155-188 (335)
265 1lqt_A FPRA; NADP+ derivative, 97.3 9.2E-05 3.2E-09 77.1 3.8 36 65-100 2-44 (456)
266 3d1c_A Flavin-containing putat 97.3 0.0014 4.7E-08 65.8 12.1 104 67-247 167-272 (369)
267 4eqs_A Coenzyme A disulfide re 97.2 0.001 3.6E-08 68.7 10.2 34 66-99 147-180 (437)
268 1cjc_A Protein (adrenodoxin re 97.2 0.00018 6.3E-09 74.9 4.5 36 65-100 5-42 (460)
269 4a5l_A Thioredoxin reductase; 97.2 0.0033 1.1E-07 61.3 13.4 34 66-99 152-185 (314)
270 3lzw_A Ferredoxin--NADP reduct 97.2 0.0015 5.1E-08 64.3 10.8 34 66-99 154-187 (332)
271 1n4w_A CHOD, cholesterol oxida 97.2 0.00021 7.2E-09 75.4 4.8 57 192-248 227-289 (504)
272 1gte_A Dihydropyrimidine dehyd 97.2 0.00025 8.5E-09 81.4 5.4 36 65-100 186-222 (1025)
273 1cjc_A Protein (adrenodoxin re 97.2 0.0022 7.5E-08 66.7 12.2 34 66-99 145-199 (460)
274 1coy_A Cholesterol oxidase; ox 97.2 0.00025 8.7E-09 74.9 5.1 59 190-248 230-294 (507)
275 3gwf_A Cyclohexanone monooxyge 97.1 0.003 1E-07 67.1 12.7 36 65-100 177-212 (540)
276 4g6h_A Rotenone-insensitive NA 97.1 0.0019 6.6E-08 67.9 10.6 55 188-246 274-331 (502)
277 3kd9_A Coenzyme A disulfide re 97.0 0.0029 9.8E-08 65.6 11.5 33 67-99 149-181 (449)
278 1vg0_A RAB proteins geranylger 97.0 0.00055 1.9E-08 73.5 5.8 40 63-102 5-44 (650)
279 3ayj_A Pro-enzyme of L-phenyla 96.9 0.00029 1E-08 76.6 2.7 36 66-101 56-100 (721)
280 1lqt_A FPRA; NADP+ derivative, 96.8 0.0028 9.5E-08 65.9 8.9 34 66-99 147-201 (456)
281 2gag_A Heterotetrameric sarcos 96.8 0.0029 9.9E-08 72.0 9.7 33 67-99 285-317 (965)
282 3fbs_A Oxidoreductase; structu 96.8 0.0047 1.6E-07 59.6 9.8 33 66-99 141-173 (297)
283 4gcm_A TRXR, thioredoxin reduc 96.8 0.018 6.2E-07 56.1 14.0 33 67-99 146-178 (312)
284 3uox_A Otemo; baeyer-villiger 96.8 0.0015 5E-08 69.6 6.4 36 65-100 184-219 (545)
285 1gte_A Dihydropyrimidine dehyd 96.6 0.0064 2.2E-07 69.7 11.0 33 67-99 333-366 (1025)
286 3k30_A Histamine dehydrogenase 96.6 0.01 3.4E-07 65.1 11.8 34 66-99 523-558 (690)
287 4ap3_A Steroid monooxygenase; 96.5 0.0059 2E-07 65.0 8.9 36 65-100 190-225 (549)
288 2vdc_G Glutamate synthase [NAD 96.5 0.0038 1.3E-07 64.8 7.0 35 65-99 263-298 (456)
289 3fwz_A Inner membrane protein 96.3 0.0043 1.5E-07 53.0 5.5 35 65-99 6-40 (140)
290 1ps9_A 2,4-dienoyl-COA reducta 96.3 0.015 5.2E-07 63.4 10.8 30 65-94 493-522 (671)
291 2xve_A Flavin-containing monoo 96.2 0.014 4.8E-07 60.7 9.8 35 65-99 196-230 (464)
292 2g1u_A Hypothetical protein TM 96.1 0.0059 2E-07 53.1 5.1 36 65-100 18-53 (155)
293 3klj_A NAD(FAD)-dependent dehy 96.0 0.005 1.7E-07 62.4 5.1 36 66-101 146-181 (385)
294 2gv8_A Monooxygenase; FMO, FAD 95.8 0.022 7.4E-07 58.8 8.9 35 65-99 211-246 (447)
295 1lss_A TRK system potassium up 95.8 0.0095 3.2E-07 50.4 4.9 33 67-99 5-37 (140)
296 1id1_A Putative potassium chan 95.7 0.013 4.3E-07 50.8 5.7 34 66-99 3-36 (153)
297 3llv_A Exopolyphosphatase-rela 95.5 0.016 5.6E-07 49.2 5.3 33 67-99 7-39 (141)
298 1o94_A Tmadh, trimethylamine d 95.3 0.038 1.3E-06 60.8 9.1 34 66-99 528-563 (729)
299 3h28_A Sulfide-quinone reducta 95.1 0.079 2.7E-06 54.2 10.1 52 190-247 204-256 (430)
300 3ic5_A Putative saccharopine d 95.0 0.02 6.9E-07 46.6 4.4 33 67-99 6-39 (118)
301 1f0y_A HCDH, L-3-hydroxyacyl-C 95.0 0.024 8.1E-07 55.2 5.4 33 67-99 16-48 (302)
302 3sx6_A Sulfide-quinone reducta 94.9 0.089 3.1E-06 54.0 10.0 53 190-246 212-268 (437)
303 3c85_A Putative glutathione-re 94.8 0.029 1E-06 50.0 5.1 34 66-99 39-73 (183)
304 2hmt_A YUAA protein; RCK, KTN, 94.6 0.029 9.8E-07 47.5 4.4 33 67-99 7-39 (144)
305 3l4b_C TRKA K+ channel protien 94.5 0.024 8.1E-07 52.3 3.9 32 68-99 2-33 (218)
306 3lxd_A FAD-dependent pyridine 94.5 0.041 1.4E-06 56.1 5.9 36 66-101 152-187 (415)
307 3fg2_P Putative rubredoxin red 94.4 0.041 1.4E-06 55.9 5.7 36 66-101 142-177 (404)
308 4fk1_A Putative thioredoxin re 94.3 0.088 3E-06 51.0 7.7 33 67-99 147-180 (304)
309 4e12_A Diketoreductase; oxidor 94.2 0.045 1.5E-06 52.7 5.2 33 67-99 5-37 (283)
310 3ado_A Lambda-crystallin; L-gu 94.2 0.031 1.1E-06 54.7 4.1 33 67-99 7-39 (319)
311 3h8l_A NADH oxidase; membrane 94.1 0.19 6.4E-06 51.0 10.0 49 188-246 220-269 (409)
312 2ewd_A Lactate dehydrogenase,; 93.8 0.052 1.8E-06 53.3 4.8 36 64-99 2-38 (317)
313 4g65_A TRK system potassium up 93.6 0.029 1E-06 58.1 2.9 35 66-100 3-37 (461)
314 3i83_A 2-dehydropantoate 2-red 93.4 0.065 2.2E-06 52.6 4.8 33 67-99 3-35 (320)
315 4dio_A NAD(P) transhydrogenase 93.3 0.08 2.7E-06 53.4 5.3 35 65-99 189-223 (405)
316 3dfz_A SIRC, precorrin-2 dehyd 93.3 0.085 2.9E-06 48.7 5.1 34 65-98 30-63 (223)
317 1bg6_A N-(1-D-carboxylethyl)-L 93.3 0.07 2.4E-06 53.1 4.9 34 66-99 4-37 (359)
318 1lld_A L-lactate dehydrogenase 93.2 0.073 2.5E-06 52.1 4.9 34 66-99 7-42 (319)
319 2x5o_A UDP-N-acetylmuramoylala 93.1 0.066 2.3E-06 55.1 4.6 35 67-101 6-40 (439)
320 1ks9_A KPA reductase;, 2-dehyd 93.1 0.085 2.9E-06 50.6 5.0 32 68-99 2-33 (291)
321 2raf_A Putative dinucleotide-b 93.1 0.093 3.2E-06 48.0 5.0 36 65-100 18-53 (209)
322 3ghy_A Ketopantoate reductase 93.0 0.09 3.1E-06 51.9 5.2 32 67-98 4-35 (335)
323 3l9w_A Glutathione-regulated p 93.0 0.077 2.6E-06 54.0 4.8 35 66-100 4-38 (413)
324 3hn2_A 2-dehydropantoate 2-red 93.0 0.074 2.5E-06 51.9 4.5 33 67-99 3-35 (312)
325 1kyq_A Met8P, siroheme biosynt 92.9 0.06 2.1E-06 51.3 3.6 35 65-99 12-46 (274)
326 3k6j_A Protein F01G10.3, confi 92.9 0.15 5E-06 52.5 6.7 33 67-99 55-87 (460)
327 3qha_A Putative oxidoreductase 92.9 0.086 2.9E-06 51.1 4.8 38 63-100 12-49 (296)
328 1jw9_B Molybdopterin biosynthe 92.7 0.074 2.5E-06 50.2 3.9 34 66-99 31-65 (249)
329 1t2d_A LDH-P, L-lactate dehydr 92.7 0.11 3.9E-06 50.9 5.4 34 66-99 4-38 (322)
330 1pzg_A LDH, lactate dehydrogen 92.6 0.11 3.9E-06 51.1 5.3 34 66-99 9-43 (331)
331 3lk7_A UDP-N-acetylmuramoylala 92.5 0.099 3.4E-06 54.0 4.9 34 66-99 9-42 (451)
332 3p2y_A Alanine dehydrogenase/p 92.4 0.089 3E-06 52.6 4.1 35 65-99 183-217 (381)
333 2dpo_A L-gulonate 3-dehydrogen 92.4 0.11 3.8E-06 50.8 4.8 33 67-99 7-39 (319)
334 3doj_A AT3G25530, dehydrogenas 92.3 0.12 4.2E-06 50.3 5.0 34 66-99 21-54 (310)
335 3oj0_A Glutr, glutamyl-tRNA re 92.3 0.072 2.5E-06 45.4 3.0 34 66-99 21-54 (144)
336 4e21_A 6-phosphogluconate dehy 92.2 0.12 4.2E-06 51.5 4.9 37 63-99 19-55 (358)
337 2ew2_A 2-dehydropantoate 2-red 92.1 0.12 4.1E-06 50.2 4.7 33 67-99 4-36 (316)
338 3g17_A Similar to 2-dehydropan 92.1 0.098 3.3E-06 50.6 4.1 33 67-99 3-35 (294)
339 2hjr_A Malate dehydrogenase; m 92.1 0.15 5.1E-06 50.2 5.3 33 67-99 15-48 (328)
340 2y0c_A BCEC, UDP-glucose dehyd 92.0 0.12 4.2E-06 53.6 4.9 35 65-99 7-41 (478)
341 3eag_A UDP-N-acetylmuramate:L- 91.8 0.17 6E-06 49.6 5.5 33 67-99 5-38 (326)
342 3k96_A Glycerol-3-phosphate de 91.7 0.17 5.8E-06 50.4 5.3 34 66-99 29-62 (356)
343 1zej_A HBD-9, 3-hydroxyacyl-CO 91.6 0.16 5.3E-06 49.1 4.7 35 64-99 10-44 (293)
344 1l7d_A Nicotinamide nucleotide 91.6 0.17 5.9E-06 50.9 5.3 35 65-99 171-205 (384)
345 1x13_A NAD(P) transhydrogenase 91.5 0.15 5.2E-06 51.6 4.8 34 66-99 172-205 (401)
346 1pjc_A Protein (L-alanine dehy 91.5 0.15 5.2E-06 50.8 4.7 33 67-99 168-200 (361)
347 3phh_A Shikimate dehydrogenase 91.5 0.2 6.7E-06 47.7 5.2 35 66-100 118-152 (269)
348 1evy_A Glycerol-3-phosphate de 91.4 0.11 3.7E-06 52.0 3.5 32 68-99 17-48 (366)
349 3g79_A NDP-N-acetyl-D-galactos 91.4 0.14 4.7E-06 53.1 4.4 35 66-100 18-54 (478)
350 3rui_A Ubiquitin-like modifier 91.4 0.17 5.9E-06 49.6 4.9 35 65-99 33-68 (340)
351 4b63_A L-ornithine N5 monooxyg 91.3 0.49 1.7E-05 49.4 8.5 35 66-100 246-282 (501)
352 2uyy_A N-PAC protein; long-cha 91.2 0.22 7.7E-06 48.5 5.6 34 66-99 30-63 (316)
353 3tl2_A Malate dehydrogenase; c 91.2 0.21 7.1E-06 48.8 5.1 33 66-98 8-41 (315)
354 2aef_A Calcium-gated potassium 91.1 0.098 3.3E-06 48.6 2.7 34 65-99 8-41 (234)
355 1zcj_A Peroxisomal bifunctiona 91.1 0.2 7E-06 51.8 5.4 33 67-99 38-70 (463)
356 3h8v_A Ubiquitin-like modifier 91.1 0.14 4.6E-06 49.4 3.7 35 65-99 35-70 (292)
357 2vns_A Metalloreductase steap3 91.0 0.24 8.1E-06 45.4 5.2 34 66-99 28-61 (215)
358 3gg2_A Sugar dehydrogenase, UD 91.0 0.18 6E-06 52.0 4.7 33 67-99 3-35 (450)
359 3ego_A Probable 2-dehydropanto 91.0 0.19 6.4E-06 48.9 4.7 32 67-99 3-34 (307)
360 3pef_A 6-phosphogluconate dehy 91.0 0.19 6.5E-06 48.3 4.7 33 67-99 2-34 (287)
361 1nyt_A Shikimate 5-dehydrogena 91.0 0.21 7.3E-06 47.6 5.0 34 66-99 119-152 (271)
362 3dtt_A NADP oxidoreductase; st 91.0 0.22 7.6E-06 46.6 5.0 35 65-99 18-52 (245)
363 1z82_A Glycerol-3-phosphate de 90.9 0.2 6.8E-06 49.4 4.9 35 65-99 13-47 (335)
364 2v6b_A L-LDH, L-lactate dehydr 90.9 0.2 6.7E-06 48.8 4.7 32 68-99 2-35 (304)
365 4a7p_A UDP-glucose dehydrogena 90.8 0.21 7.3E-06 51.2 5.1 36 65-100 7-42 (446)
366 3hwr_A 2-dehydropantoate 2-red 90.8 0.2 6.8E-06 49.0 4.7 34 65-99 18-51 (318)
367 2a9f_A Putative malic enzyme ( 90.8 0.19 6.4E-06 50.2 4.4 34 65-98 187-221 (398)
368 2izz_A Pyrroline-5-carboxylate 90.7 0.22 7.4E-06 48.8 4.9 37 63-99 19-59 (322)
369 3g0o_A 3-hydroxyisobutyrate de 90.7 0.22 7.4E-06 48.3 4.9 34 66-99 7-40 (303)
370 1zud_1 Adenylyltransferase THI 90.7 0.19 6.6E-06 47.3 4.4 35 65-99 27-62 (251)
371 3l6d_A Putative oxidoreductase 90.6 0.3 1E-05 47.4 5.8 34 66-99 9-42 (306)
372 3cky_A 2-hydroxymethyl glutara 90.6 0.2 6.8E-06 48.4 4.5 35 65-99 3-37 (301)
373 3gvi_A Malate dehydrogenase; N 90.5 0.26 9E-06 48.2 5.2 35 65-99 6-41 (324)
374 2eez_A Alanine dehydrogenase; 90.5 0.25 8.5E-06 49.4 5.2 34 66-99 166-199 (369)
375 1guz_A Malate dehydrogenase; o 90.3 0.25 8.6E-06 48.1 4.9 32 68-99 2-35 (310)
376 3pid_A UDP-glucose 6-dehydroge 90.1 0.25 8.4E-06 50.4 4.8 34 65-99 35-68 (432)
377 1mv8_A GMD, GDP-mannose 6-dehy 90.1 0.2 7E-06 51.3 4.2 32 68-99 2-33 (436)
378 4dll_A 2-hydroxy-3-oxopropiona 90.0 0.25 8.5E-06 48.4 4.6 34 66-99 31-64 (320)
379 2egg_A AROE, shikimate 5-dehyd 90.0 0.28 9.5E-06 47.5 4.9 34 66-99 141-175 (297)
380 1vl6_A Malate oxidoreductase; 90.0 0.24 8.3E-06 49.3 4.4 34 65-98 191-225 (388)
381 1txg_A Glycerol-3-phosphate de 89.9 0.2 6.9E-06 49.2 3.9 30 68-97 2-31 (335)
382 3mog_A Probable 3-hydroxybutyr 89.8 0.31 1.1E-05 50.6 5.3 33 67-99 6-38 (483)
383 2vhw_A Alanine dehydrogenase; 89.7 0.31 1.1E-05 48.9 5.2 35 65-99 167-201 (377)
384 3p7m_A Malate dehydrogenase; p 89.7 0.35 1.2E-05 47.3 5.4 34 66-99 5-39 (321)
385 4huj_A Uncharacterized protein 89.7 0.18 6E-06 46.5 3.1 34 66-99 23-57 (220)
386 1p77_A Shikimate 5-dehydrogena 89.6 0.25 8.4E-06 47.2 4.1 34 66-99 119-152 (272)
387 1y6j_A L-lactate dehydrogenase 89.6 0.33 1.1E-05 47.4 5.1 34 66-99 7-42 (318)
388 1jay_A Coenzyme F420H2:NADP+ o 89.6 0.33 1.1E-05 44.1 4.8 32 68-99 2-34 (212)
389 3u62_A Shikimate dehydrogenase 89.5 0.38 1.3E-05 45.3 5.3 32 68-99 110-142 (253)
390 2zyd_A 6-phosphogluconate dehy 89.5 0.29 9.9E-06 50.8 4.9 36 64-99 13-48 (480)
391 3h5n_A MCCB protein; ubiquitin 89.5 0.26 8.9E-06 49.0 4.3 34 66-99 118-152 (353)
392 4ffl_A PYLC; amino acid, biosy 89.4 0.37 1.2E-05 48.0 5.4 35 68-102 3-37 (363)
393 3pdu_A 3-hydroxyisobutyrate de 89.2 0.23 7.9E-06 47.7 3.7 32 68-99 3-34 (287)
394 3pqe_A L-LDH, L-lactate dehydr 89.2 0.3 1E-05 47.8 4.5 34 66-99 5-40 (326)
395 2qyt_A 2-dehydropantoate 2-red 89.2 0.22 7.5E-06 48.4 3.5 31 67-97 9-45 (317)
396 2rcy_A Pyrroline carboxylate r 89.2 0.32 1.1E-05 45.8 4.6 33 67-99 5-41 (262)
397 4gsl_A Ubiquitin-like modifier 89.1 0.33 1.1E-05 51.3 4.9 35 65-99 325-360 (615)
398 3don_A Shikimate dehydrogenase 89.0 0.28 9.7E-06 46.8 4.0 35 66-100 117-152 (277)
399 3tnl_A Shikimate dehydrogenase 89.0 0.39 1.3E-05 46.7 5.1 35 65-99 153-188 (315)
400 3jyo_A Quinate/shikimate dehyd 88.9 0.39 1.3E-05 46.0 5.0 35 65-99 126-161 (283)
401 3vh1_A Ubiquitin-like modifier 88.9 0.33 1.1E-05 51.2 4.8 34 66-99 327-361 (598)
402 4ezb_A Uncharacterized conserv 88.9 0.35 1.2E-05 47.3 4.7 33 67-99 25-58 (317)
403 2f1k_A Prephenate dehydrogenas 88.8 0.37 1.2E-05 45.9 4.7 32 68-99 2-33 (279)
404 2q3e_A UDP-glucose 6-dehydroge 88.8 0.27 9.3E-06 50.9 4.0 33 67-99 6-40 (467)
405 4gx0_A TRKA domain protein; me 88.7 0.39 1.3E-05 51.0 5.3 37 67-103 349-385 (565)
406 2pv7_A T-protein [includes: ch 88.6 0.4 1.4E-05 46.3 4.9 33 67-99 22-55 (298)
407 1dlj_A UDP-glucose dehydrogena 88.6 0.33 1.1E-05 49.2 4.4 31 68-99 2-32 (402)
408 2p4q_A 6-phosphogluconate dehy 88.6 0.44 1.5E-05 49.7 5.4 35 65-99 9-43 (497)
409 4gwg_A 6-phosphogluconate dehy 88.6 0.41 1.4E-05 49.5 5.2 34 66-99 4-37 (484)
410 1n4w_A CHOD, cholesterol oxida 88.6 0.44 1.5E-05 49.8 5.5 36 65-100 4-39 (504)
411 1ur5_A Malate dehydrogenase; o 88.5 0.42 1.4E-05 46.5 4.9 33 67-99 3-36 (309)
412 3ond_A Adenosylhomocysteinase; 88.5 0.43 1.5E-05 49.1 5.2 35 65-99 264-298 (488)
413 3gpi_A NAD-dependent epimerase 88.5 0.53 1.8E-05 44.8 5.7 34 67-100 4-37 (286)
414 2h78_A Hibadh, 3-hydroxyisobut 88.5 0.34 1.2E-05 46.8 4.3 33 67-99 4-36 (302)
415 1a5z_A L-lactate dehydrogenase 88.5 0.31 1.1E-05 47.6 4.0 32 68-99 2-35 (319)
416 3orq_A N5-carboxyaminoimidazol 88.4 0.72 2.5E-05 46.2 6.8 37 65-101 11-47 (377)
417 3tri_A Pyrroline-5-carboxylate 88.4 0.5 1.7E-05 45.2 5.4 34 66-99 3-39 (280)
418 3ldh_A Lactate dehydrogenase; 88.4 0.49 1.7E-05 46.3 5.3 35 65-99 20-56 (330)
419 3dfu_A Uncharacterized protein 88.4 0.14 4.7E-06 47.5 1.3 32 66-97 6-37 (232)
420 2gf2_A Hibadh, 3-hydroxyisobut 88.3 0.4 1.4E-05 46.1 4.7 32 68-99 2-33 (296)
421 3o0h_A Glutathione reductase; 88.3 0.37 1.3E-05 50.1 4.7 35 66-100 191-225 (484)
422 1x0v_A GPD-C, GPDH-C, glycerol 88.3 0.21 7.2E-06 49.5 2.7 33 67-99 9-48 (354)
423 1nvt_A Shikimate 5'-dehydrogen 88.2 0.39 1.3E-05 46.1 4.5 33 66-99 128-160 (287)
424 3o38_A Short chain dehydrogena 88.2 0.58 2E-05 44.1 5.7 35 65-99 21-57 (266)
425 3o8q_A Shikimate 5-dehydrogena 88.2 0.49 1.7E-05 45.3 5.1 35 65-99 125-160 (281)
426 1oju_A MDH, malate dehydrogena 88.2 0.34 1.2E-05 46.7 4.0 32 68-99 2-35 (294)
427 3fbt_A Chorismate mutase and s 88.2 0.43 1.5E-05 45.7 4.6 35 65-99 121-156 (282)
428 3e8x_A Putative NAD-dependent 88.1 0.47 1.6E-05 43.8 4.9 35 65-99 20-55 (236)
429 3pwz_A Shikimate dehydrogenase 88.0 0.48 1.7E-05 45.1 5.0 35 65-99 119-154 (272)
430 3ggo_A Prephenate dehydrogenas 88.0 0.47 1.6E-05 46.2 5.0 33 67-99 34-68 (314)
431 2pgd_A 6-phosphogluconate dehy 88.0 0.45 1.5E-05 49.5 5.1 33 67-99 3-35 (482)
432 1tt5_B Ubiquitin-activating en 88.0 0.48 1.6E-05 48.3 5.2 35 65-99 39-74 (434)
433 3d4o_A Dipicolinate synthase s 87.9 0.52 1.8E-05 45.4 5.2 34 66-99 155-188 (293)
434 3t4e_A Quinate/shikimate dehyd 87.9 0.52 1.8E-05 45.8 5.2 35 65-99 147-182 (312)
435 1yqg_A Pyrroline-5-carboxylate 87.9 0.37 1.3E-05 45.4 4.1 32 68-99 2-34 (263)
436 2rir_A Dipicolinate synthase, 87.9 0.51 1.7E-05 45.6 5.1 35 65-99 156-190 (300)
437 3vtf_A UDP-glucose 6-dehydroge 87.8 0.45 1.6E-05 48.5 4.8 35 65-99 20-54 (444)
438 2cvz_A Dehydrogenase, 3-hydrox 87.7 0.43 1.5E-05 45.6 4.4 31 68-99 3-33 (289)
439 1vpd_A Tartronate semialdehyde 87.6 0.41 1.4E-05 46.1 4.2 33 67-99 6-38 (299)
440 1pjq_A CYSG, siroheme synthase 87.6 0.44 1.5E-05 49.1 4.7 34 66-99 12-45 (457)
441 3ew7_A LMO0794 protein; Q8Y8U8 87.6 0.56 1.9E-05 42.5 5.0 32 68-99 2-34 (221)
442 1ez4_A Lactate dehydrogenase; 87.6 0.43 1.5E-05 46.6 4.4 37 63-99 2-40 (318)
443 3ktd_A Prephenate dehydrogenas 87.5 0.58 2E-05 46.1 5.3 33 67-99 9-41 (341)
444 4aj2_A L-lactate dehydrogenase 87.5 0.58 2E-05 45.9 5.3 36 64-99 17-54 (331)
445 2hk9_A Shikimate dehydrogenase 87.4 0.39 1.3E-05 45.9 3.9 34 66-99 129-162 (275)
446 3qsg_A NAD-binding phosphogluc 87.4 0.4 1.4E-05 46.7 4.0 33 66-98 24-57 (312)
447 3q2o_A Phosphoribosylaminoimid 87.3 0.79 2.7E-05 46.0 6.3 36 65-100 13-48 (389)
448 1hyh_A L-hicdh, L-2-hydroxyiso 87.3 0.4 1.4E-05 46.6 4.0 32 68-99 3-36 (309)
449 4a9w_A Monooxygenase; baeyer-v 87.2 0.45 1.6E-05 46.5 4.4 34 65-99 162-195 (357)
450 1yj8_A Glycerol-3-phosphate de 87.2 0.36 1.2E-05 48.3 3.7 32 68-99 23-61 (375)
451 2wtb_A MFP2, fatty acid multif 87.2 0.47 1.6E-05 51.9 4.8 33 67-99 313-345 (725)
452 1pgj_A 6PGDH, 6-PGDH, 6-phosph 87.2 0.52 1.8E-05 48.9 4.9 32 68-99 3-34 (478)
453 1hdo_A Biliverdin IX beta redu 87.1 0.64 2.2E-05 41.5 5.1 34 67-100 4-38 (206)
454 2iz1_A 6-phosphogluconate dehy 87.1 0.56 1.9E-05 48.6 5.1 34 66-99 5-38 (474)
455 3nep_X Malate dehydrogenase; h 87.1 0.45 1.5E-05 46.3 4.2 32 68-99 2-35 (314)
456 2g5c_A Prephenate dehydrogenas 87.0 0.54 1.8E-05 44.8 4.7 32 68-99 3-36 (281)
457 1y8q_A Ubiquitin-like 1 activa 87.0 0.44 1.5E-05 47.1 4.2 35 65-99 35-70 (346)
458 3vku_A L-LDH, L-lactate dehydr 87.0 0.5 1.7E-05 46.2 4.4 35 65-99 8-44 (326)
459 2d5c_A AROE, shikimate 5-dehyd 87.0 0.64 2.2E-05 43.9 5.1 32 68-99 118-149 (263)
460 3d0o_A L-LDH 1, L-lactate dehy 87.0 0.49 1.7E-05 46.2 4.4 35 65-99 5-41 (317)
461 3gvp_A Adenosylhomocysteinase 86.9 0.53 1.8E-05 47.6 4.6 36 64-99 218-253 (435)
462 3c24_A Putative oxidoreductase 86.9 0.54 1.9E-05 45.0 4.6 33 67-99 12-45 (286)
463 3dhn_A NAD-dependent epimerase 86.8 0.48 1.6E-05 43.3 4.1 34 67-100 5-39 (227)
464 3ius_A Uncharacterized conserv 86.7 0.57 1.9E-05 44.5 4.7 33 67-99 6-38 (286)
465 3h2s_A Putative NADH-flavin re 86.7 0.65 2.2E-05 42.2 4.9 32 68-99 2-34 (224)
466 3ce6_A Adenosylhomocysteinase; 86.6 0.53 1.8E-05 48.8 4.6 35 65-99 273-307 (494)
467 1ldn_A L-lactate dehydrogenase 86.5 0.61 2.1E-05 45.5 4.8 34 66-99 6-41 (316)
468 1npy_A Hypothetical shikimate 86.5 0.63 2.2E-05 44.3 4.7 34 66-99 119-153 (271)
469 1np3_A Ketol-acid reductoisome 86.4 0.72 2.5E-05 45.4 5.3 33 67-99 17-49 (338)
470 3k5i_A Phosphoribosyl-aminoimi 86.4 0.66 2.3E-05 46.9 5.1 37 62-99 20-56 (403)
471 1coy_A Cholesterol oxidase; ox 86.3 1.2 4.3E-05 46.4 7.4 37 64-100 9-45 (507)
472 3c7a_A Octopine dehydrogenase; 86.2 0.44 1.5E-05 48.2 3.8 31 67-97 3-34 (404)
473 3gt0_A Pyrroline-5-carboxylate 86.1 0.8 2.8E-05 42.7 5.3 33 67-99 3-39 (247)
474 1lu9_A Methylene tetrahydromet 86.1 0.75 2.6E-05 44.1 5.2 34 66-99 119-153 (287)
475 1edz_A 5,10-methylenetetrahydr 86.1 0.62 2.1E-05 45.3 4.5 36 64-99 175-211 (320)
476 2we8_A Xanthine dehydrogenase; 86.0 0.86 2.9E-05 45.7 5.7 37 65-101 203-239 (386)
477 2i6t_A Ubiquitin-conjugating e 86.0 0.56 1.9E-05 45.4 4.2 33 67-99 15-49 (303)
478 2ahr_A Putative pyrroline carb 85.8 0.69 2.4E-05 43.4 4.7 33 67-99 4-36 (259)
479 2o3j_A UDP-glucose 6-dehydroge 85.6 0.6 2E-05 48.5 4.4 33 67-99 10-44 (481)
480 3d1l_A Putative NADP oxidoredu 85.6 0.64 2.2E-05 43.9 4.3 33 67-99 11-44 (266)
481 1o5i_A 3-oxoacyl-(acyl carrier 85.4 0.93 3.2E-05 42.3 5.3 35 65-99 18-53 (249)
482 2pzm_A Putative nucleotide sug 85.3 1 3.4E-05 43.9 5.8 35 65-99 19-54 (330)
483 2qrj_A Saccharopine dehydrogen 85.3 0.72 2.4E-05 46.1 4.6 35 65-99 213-251 (394)
484 4id9_A Short-chain dehydrogena 85.2 0.88 3E-05 44.5 5.3 37 64-100 17-54 (347)
485 1wdk_A Fatty oxidation complex 85.2 0.72 2.5E-05 50.4 5.0 33 67-99 315-347 (715)
486 2dvm_A Malic enzyme, 439AA lon 84.8 0.86 2.9E-05 46.4 5.0 31 66-96 186-219 (439)
487 1gpj_A Glutamyl-tRNA reductase 84.8 0.68 2.3E-05 46.8 4.3 35 65-99 166-201 (404)
488 1i36_A Conserved hypothetical 84.6 0.67 2.3E-05 43.6 4.0 30 68-97 2-31 (264)
489 1lnq_A MTHK channels, potassiu 84.6 0.44 1.5E-05 46.8 2.8 33 66-99 115-147 (336)
490 3two_A Mannitol dehydrogenase; 84.2 0.88 3E-05 44.8 4.8 34 66-99 177-210 (348)
491 1leh_A Leucine dehydrogenase; 84.2 1.1 3.7E-05 44.5 5.4 34 65-98 172-205 (364)
492 3zwc_A Peroxisomal bifunctiona 84.1 0.75 2.6E-05 50.2 4.5 33 67-99 317-349 (742)
493 1y8q_B Anthracycline-, ubiquit 84.0 0.69 2.3E-05 49.4 4.0 34 66-99 17-51 (640)
494 3ojo_A CAP5O; rossmann fold, c 83.8 0.75 2.6E-05 46.9 4.1 35 65-99 10-44 (431)
495 1kdg_A CDH, cellobiose dehydro 83.7 1.1 3.8E-05 47.2 5.6 37 64-100 5-41 (546)
496 1yb4_A Tartronic semialdehyde 83.6 0.62 2.1E-05 44.7 3.3 32 67-99 4-35 (295)
497 4e4t_A Phosphoribosylaminoimid 83.6 1.1 3.8E-05 45.5 5.3 36 65-100 34-69 (419)
498 4b4o_A Epimerase family protei 83.6 1.2 4.2E-05 42.5 5.4 34 67-100 1-35 (298)
499 3h9u_A Adenosylhomocysteinase; 83.5 0.95 3.3E-05 45.8 4.6 35 65-99 210-244 (436)
500 4gx0_A TRKA domain protein; me 83.5 1 3.5E-05 47.7 5.2 36 65-100 126-161 (565)
No 1
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=2.3e-41 Score=352.30 Aligned_cols=357 Identities=18% Similarity=0.165 Sum_probs=258.2
Q ss_pred CCCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCch
Q 040732 63 SVAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLD 142 (541)
Q Consensus 63 ~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~ 142 (541)
.+.++||+||||||+|+++|+.|+++|++|+|+||.+.... ...+..+.+++.+.|+++|++
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~------------------~~~~~~l~~~~~~~l~~lg~~ 81 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKP------------------VGAAISVWPNGVKCMAHLGMG 81 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----------------------CEEEECHHHHHHHHHTTCH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCC------------------cCeeEEECHHHHHHHHHCCCH
Confidence 35679999999999999999999999999999999975544 566778999999999999999
Q ss_pred hhHhhccceeeeeeEEEECC-eeeeecCCCCCC--CCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCe
Q 040732 143 DCVEEIDAHPVVGYALFKDG-KITKTPYPLGNF--QANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGI 218 (541)
Q Consensus 143 ~~~~~~~~~~~~g~~~~~~g-~~~~~~~~~~~~--~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~ 218 (541)
+.+.... .+..++.++... ......++.... .....++.++|..|.+.|++.+.+ +++++++ |+++..+++
T Consensus 82 ~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~~~~- 156 (407)
T 3rp8_A 82 DIMETFG-GPLRRMAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR---DSVQFGKRVTRCEEDAD- 156 (407)
T ss_dssp HHHHHHS-CCCCEEEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG---GGEEESCCEEEEEEETT-
T ss_pred HHHHhhc-CCCcceEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc---CEEEECCEEEEEEecCC-
Confidence 8887643 344555555543 222222221110 012346789999999999999865 6777887 999998877
Q ss_pred EEEEEEEcCCCcEEEEEcCEEEEecCCCCcccccc-cCCCcccccceEEEEEe---ecCCCCCCeeEEEEcCCCcEEEEE
Q 040732 219 VKGVHYKTKDGQEHKSYAPLTIVCDGGFSNLRRSL-CNPKVDIPSCFVGMALE---NCQLPVPNHGHVVLTDPSPILFYP 294 (541)
Q Consensus 219 v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~vR~~l-~~~~~~~~~~~~g~~~~---~~~~p~~~~~~~~~~~~~~~~~~p 294 (541)
+|++++++|++ ++||+||+|||.+|.+|+.+ +.........+..+... ....+.......+++++++++++|
T Consensus 157 --~v~v~~~~g~~--~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 232 (407)
T 3rp8_A 157 --GVTVWFTDGSS--ASGDLLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMP 232 (407)
T ss_dssp --EEEEEETTSCE--EEESEEEECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEEETTEEEEEEE
T ss_pred --cEEEEEcCCCE--EeeCEEEECCCcChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEECCCcEEEEEE
Confidence 46677788875 55999999999999999998 54322222222222211 122333455666778899999999
Q ss_pred ccCCceEEEEEecCCCCCCCCCchhHHHHHHHhcCCCCChhhHHHHHhhhhcCC--eeeccCccccCCCCCCCcEEEecc
Q 040732 295 ISSSEVRCLVDVPAGQKLPSIANGEMAKYLKTKVAPQIPDELRDAFISKVEKGS--IRTATNRSMPAAPKTTPGALLLGD 372 (541)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vvliGD 372 (541)
++++...+.+.++. ......+.++..+.+.+.+. .+.+.+.+.+........ ...++... ..+|..+|++|+||
T Consensus 233 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~rv~LvGD 308 (407)
T 3rp8_A 233 VSAGRFYFFFDVPL-PAGLAEDRDTLRADLSRYFA-GWAPPVQKLIAALDPQTTNRIEIHDIEP--FSRLVRGRVALLGD 308 (407)
T ss_dssp ETTTEEEEEEEEEC-CTTCSCCTTTHHHHHHHHTT-TCCHHHHHHHHHSCGGGCEEEEEEECCC--CSCCEETTEEECGG
T ss_pred cCCCeEEEEEEeCC-CcCCCCCchhHHHHHHHHhc-CCChHHHHHHHcCCccceeEEeeEecCC--CCceecCCEEEEEc
Confidence 99998888887762 22333445566677776554 345555544322222122 33333332 26888899999999
Q ss_pred cCCCCCCCCCcchhHHHhhHHHHHHhccccCCCCChHHHHHHHHHHHHHhcChhHHHHHHHHHHHhhhcCCChHHHHHHH
Q 040732 373 AFNMRHPLTGGGMTVALSDVVVLRNLIKPLQDFHDAASLNQYLESFYTLRKPVASTINTLANSAYQVFSASSDEAREVMR 452 (541)
Q Consensus 373 Aah~~~P~~GqG~~~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~~~~~~i~~ls~~l~~~~~~~~~~~~~~lr 452 (541)
|||.++|++|||+|+||+||..|+++|.... ....+|+.|+++|++++..++..++.+..++... ++....+|
T Consensus 309 AAh~~~P~~GqG~~~al~da~~La~~L~~~~------~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~-~~~~~~~R 381 (407)
T 3rp8_A 309 AGHSTTPDIGQGGCAAMEDAVVLGAVFRQTR------DIAAALREYEAQRCDRVRDLVLKARKRCDITHGK-DMQLTEAW 381 (407)
T ss_dssp GTCCCCGGGSCHHHHHHHHHHHHHHHHHSCC------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-THHHHHHH
T ss_pred ccccCCcchhhhHHHHHHHHHHHHHHHhcCC------CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcC-CHHHHHHH
Confidence 9999999999999999999999999998631 4578999999999999999999999999999866 56678888
Q ss_pred HHHHH
Q 040732 453 QASVD 457 (541)
Q Consensus 453 ~~~~~ 457 (541)
+..+.
T Consensus 382 ~~~l~ 386 (407)
T 3rp8_A 382 YQELR 386 (407)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88875
No 2
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=100.00 E-value=8.2e-41 Score=356.05 Aligned_cols=355 Identities=18% Similarity=0.184 Sum_probs=253.1
Q ss_pred CCCCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCc
Q 040732 62 ESVAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGL 141 (541)
Q Consensus 62 ~~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl 141 (541)
+++.++||+||||||+|+++|+.|+++|++|+||||.+.... ...+..+++++++.|+++|+
T Consensus 7 ~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~------------------~~r~~~l~~~~~~~l~~lGl 68 (500)
T 2qa1_A 7 HHRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTG------------------ESRGLGFTARTMEVFDQRGI 68 (500)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CC------------------CCCSEEECHHHHHHHHTTTC
T ss_pred CccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC------------------CCCcceECHHHHHHHHHCCC
Confidence 346779999999999999999999999999999999876544 45567799999999999999
Q ss_pred hhhHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEE
Q 040732 142 DDCVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVK 220 (541)
Q Consensus 142 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~ 220 (541)
++.+... ...... ...+. ...+... ......++.++|..+++.|.+.+.+. ++++++++ |+++.++++.+.
T Consensus 69 ~~~~~~~--~~~~~~--~~~~~--~~~~~~~-~~~~~~~~~i~~~~l~~~L~~~~~~~-gv~v~~~~~v~~i~~~~~~v~ 140 (500)
T 2qa1_A 69 LPRFGEV--ETSTQG--HFGGL--PIDFGVL-EGAWQAAKTVPQSVTETHLEQWATGL-GADIRRGHEVLSLTDDGAGVT 140 (500)
T ss_dssp GGGGCSC--CBCCEE--EETTE--EEEGGGS-TTGGGCEEEEEHHHHHHHHHHHHHHT-TCEEEETCEEEEEEEETTEEE
T ss_pred HHHHHhc--cccccc--cccce--ecccccC-CCCCCceeecCHHHHHHHHHHHHHHC-CCEEECCcEEEEEEEcCCeEE
Confidence 9877653 111111 11221 1111100 01122357899999999999999887 79999987 999988877543
Q ss_pred EEEEEcCCCcEEEEEcCEEEEecCCCCcccccccCCCcccccceEEEEEeecCCC-CCCeeEEEEcCCCcEEEEEccCCc
Q 040732 221 GVHYKTKDGQEHKSYAPLTIVCDGGFSNLRRSLCNPKVDIPSCFVGMALENCQLP-VPNHGHVVLTDPSPILFYPISSSE 299 (541)
Q Consensus 221 gV~v~~~~g~~~~v~a~lvV~AdG~~S~vR~~l~~~~~~~~~~~~g~~~~~~~~p-~~~~~~~~~~~~~~~~~~p~~~~~ 299 (541)
|++.+.+| +.+++||+||+|||.+|.+|++++.+.+.....+.++... ...+ .+....+++.++++++++|.+++.
T Consensus 141 -v~~~~~~g-~~~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~p~~~g~ 217 (500)
T 2qa1_A 141 -VEVRGPEG-KHTLRAAYLVGCDGGRSSVRKAAGFDFPGTAATMEMYLAD-IKGVELQPRMIGETLPGGMVMVGPLPGGI 217 (500)
T ss_dssp -EEEEETTE-EEEEEESEEEECCCTTCHHHHHTTCCCCEECCCCEEEEEE-EESCCCCCEEEEEEETTEEEEEEEETTTE
T ss_pred -EEEEcCCC-CEEEEeCEEEECCCcchHHHHHcCCCcCCCccceEEEEEE-EEeCCCCCceEEEECCCcEEEEEEcCCCE
Confidence 55544444 3467899999999999999999988766555555555443 2121 123345567788899999999988
Q ss_pred eEEEEEecCCCC---CCCCCchhHHHHHHHhcCCCCChhhHHHHHhhhhcCCeeeccCccccCCCCCCCcEEEecccCCC
Q 040732 300 VRCLVDVPAGQK---LPSIANGEMAKYLKTKVAPQIPDELRDAFISKVEKGSIRTATNRSMPAAPKTTPGALLLGDAFNM 376 (541)
Q Consensus 300 ~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvliGDAah~ 376 (541)
+++++..+.... ....+.+++.+.+++.+...+.. .+......++.....+.+|..+||+|+|||||.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---------~~~~~~~~~~~~~~~a~~~~~grv~L~GDAAH~ 288 (500)
T 2qa1_A 218 TRIIVCERGTPPQRRETPPSWHEVADAWKRLTGDDIAH---------AEPVWVSAFGNATRQVTEYRRGRVILAGDSAHI 288 (500)
T ss_dssp EEEEEEETTCCC-----CCCHHHHHHHHHHHHSCCCTT---------SEEEEEEEEECCEEECSCSEETTEEECGGGTEE
T ss_pred EEEEEEcCCCCCccccCCCCHHHHHHHHHHhcCCCCCc---------cceeEEEEeccCcEEccccccCCEEEEEccccC
Confidence 777766542211 12234556666666554322210 011122356666667889999999999999999
Q ss_pred CCCCCCcchhHHHhhHHHHHHhccccCCCCChHHHHHHHHHHHHHhcChhHHHHHHHHHHHhhhcCCChHHHHHHHHHHH
Q 040732 377 RHPLTGGGMTVALSDVVVLRNLIKPLQDFHDAASLNQYLESFYTLRKPVASTINTLANSAYQVFSASSDEAREVMRQASV 456 (541)
Q Consensus 377 ~~P~~GqG~~~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~~~~~~i~~ls~~l~~~~~~~~~~~~~~lr~~~~ 456 (541)
++|++|||||+||+||.+|+|+|+.... ....+.+|++|+++|++++..++..++.+..++.. ++....+|+...
T Consensus 289 ~~P~~GqG~n~gi~DA~~La~~La~~~~---g~~~~~~L~~Y~~eR~~~~~~~~~~s~~~~~l~~~--~~~~~~~R~~~~ 363 (500)
T 2qa1_A 289 HLPAGGQGMNTSIQDAVNLGWKLGAVVN---GTATEELLDSYHSERHAVGKRLLMNTQAQGLLFLS--GPEVQPLRDVLT 363 (500)
T ss_dssp CCCCSSCHHHHHHHHHHHHHHHHHHHHT---TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--CGGGHHHHHHHH
T ss_pred CCCccccchhhhHHHHHHHHHHHHHHHc---CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CchHHHHHHHHH
Confidence 9999999999999999999999987532 11236799999999999999999999999998874 344456777665
Q ss_pred HHh
Q 040732 457 DYL 459 (541)
Q Consensus 457 ~~~ 459 (541)
+.+
T Consensus 364 ~~~ 366 (500)
T 2qa1_A 364 ELI 366 (500)
T ss_dssp HHH
T ss_pred Hhh
Confidence 544
No 3
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=100.00 E-value=1.1e-40 Score=355.00 Aligned_cols=353 Identities=17% Similarity=0.157 Sum_probs=253.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchh
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDD 143 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~ 143 (541)
+.++||+||||||+|+++|+.|+++|++|+||||.+.... ...+..+++++++.|+++|+++
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~------------------~~r~~~l~~~~~~~l~~lGl~~ 71 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTG------------------ESRGLGFTARTMEVFDQRGILP 71 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCC------------------CCCSEEECHHHHHHHHHTTCGG
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCC------------------CCceeEECHHHHHHHHHCCCHH
Confidence 4678999999999999999999999999999999876544 4556789999999999999998
Q ss_pred hHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEE
Q 040732 144 CVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGV 222 (541)
Q Consensus 144 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV 222 (541)
.+... .+.... ...+. ...+... ......++.++|..+++.|.+.+.+. ++++++++ |+++.++++.+. |
T Consensus 72 ~~~~~--~~~~~~--~~~~~--~~~~~~~-~~~~~~~~~i~~~~l~~~L~~~~~~~-gv~v~~~~~v~~i~~~~~~v~-v 142 (499)
T 2qa2_A 72 AFGPV--ETSTQG--HFGGR--PVDFGVL-EGAHYGVKAVPQSTTESVLEEWALGR-GAELLRGHTVRALTDEGDHVV-V 142 (499)
T ss_dssp GGCSC--CEESEE--EETTE--EEEGGGS-TTCCCEEEEEEHHHHHHHHHHHHHHT-TCEEEESCEEEEEEECSSCEE-E
T ss_pred HHHhc--cccccc--eecce--ecccccC-CCCCCceEecCHHHHHHHHHHHHHhC-CCEEEcCCEEEEEEEeCCEEE-E
Confidence 87653 122111 11222 1111100 01122457899999999999999887 79999987 999988776543 5
Q ss_pred EEEcCCCcEEEEEcCEEEEecCCCCcccccccCCCcccccceEEEEEeecCCC-CCCeeEEEEcCCCcEEEEEccCCceE
Q 040732 223 HYKTKDGQEHKSYAPLTIVCDGGFSNLRRSLCNPKVDIPSCFVGMALENCQLP-VPNHGHVVLTDPSPILFYPISSSEVR 301 (541)
Q Consensus 223 ~v~~~~g~~~~v~a~lvV~AdG~~S~vR~~l~~~~~~~~~~~~g~~~~~~~~p-~~~~~~~~~~~~~~~~~~p~~~~~~~ 301 (541)
++.+.+| +.+++||+||+|||.+|.+|++++.+.+.....+.++... ...+ .+....+++.++++++++|.+++.++
T Consensus 143 ~~~~~~g-~~~~~a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~g~~~~~P~~~g~~~ 220 (499)
T 2qa2_A 143 EVEGPDG-PRSLTTRYVVGCDGGRSTVRKAAGFDFPGTSASREMFLAD-IRGCEITPRPIGETVPLGMVMSAPLGDGVDR 220 (499)
T ss_dssp EEECSSC-EEEEEEEEEEECCCTTCHHHHHTTCCCCEECCCCCEEEEE-EESCCCCCEEEEEEETTEEEEEEECSSSCEE
T ss_pred EEEcCCC-cEEEEeCEEEEccCcccHHHHHcCCCCCCCCCccEEEEEE-EEECCCCcceEEEECCCeEEEEEEcCCCEEE
Confidence 5544444 3567899999999999999999988665555444444432 1121 12334556778889999999998887
Q ss_pred EEEEecCCCC---CCCCCchhHHHHHHHhcCCCCChhhHHHHHhhhhcCCeeeccCccccCCCCCCCcEEEecccCCCCC
Q 040732 302 CLVDVPAGQK---LPSIANGEMAKYLKTKVAPQIPDELRDAFISKVEKGSIRTATNRSMPAAPKTTPGALLLGDAFNMRH 378 (541)
Q Consensus 302 ~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvliGDAah~~~ 378 (541)
+++..+.... ....+.+++.+.+++.+...+.. .+......++.....+.+|..+||+|+|||||.++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---------~~~~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~ 291 (499)
T 2qa2_A 221 IIVCERGAPARRRTGPPPYQEVAAAWQRLTGQDISH---------GEPVWVSAFGDPARQVSAYRRGRVLLAGDSAHVHL 291 (499)
T ss_dssp EEEEETTCCCCCCSSSCCHHHHHHHHHHHHSCCCTT---------CEEEEEEEECCCEEECSCSEETTEEECGGGTEEEC
T ss_pred EEEEecCCCCccccCCCCHHHHHHHHHHHhCCCCCc---------cceeEEEEEeCCcEEcccccCCCEEEEecccccCC
Confidence 7776542211 12344566666666554322210 01112335666667788999999999999999999
Q ss_pred CCCCcchhHHHhhHHHHHHhccccCCCCChHHHHHHHHHHHHHhcChhHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHH
Q 040732 379 PLTGGGMTVALSDVVVLRNLIKPLQDFHDAASLNQYLESFYTLRKPVASTINTLANSAYQVFSASSDEAREVMRQASVDY 458 (541)
Q Consensus 379 P~~GqG~~~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~~~~~~i~~ls~~l~~~~~~~~~~~~~~lr~~~~~~ 458 (541)
|++|||||+||+||.+|+|+|+..... ...+.+|++|+++|++++..++..++.+..++.. ++....+|+...+.
T Consensus 292 P~~GqG~n~gi~DA~~La~~La~~l~g---~~~~~~L~~Ye~eR~~~~~~~~~~s~~~~~l~~~--~~~~~~~R~~~~~~ 366 (499)
T 2qa2_A 292 PAGGQGMNVSVQDSVNLGWKLAAVVSG---RAPAGLLDTYHEERHPVGRRLLMNTQAQGMLFLS--GDEMQPLRDVLSEL 366 (499)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHHHHHTT---SSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CGGGHHHHHHHHHH
T ss_pred CccccchhhhHHHHHHHHHHHHHHHcC---CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CchHHHHHHHHHHh
Confidence 999999999999999999999875321 1235689999999999999999999999998874 34456778776655
Q ss_pred h
Q 040732 459 L 459 (541)
Q Consensus 459 ~ 459 (541)
+
T Consensus 367 ~ 367 (499)
T 2qa2_A 367 I 367 (499)
T ss_dssp H
T ss_pred h
Confidence 5
No 4
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=100.00 E-value=6.4e-40 Score=353.73 Aligned_cols=375 Identities=18% Similarity=0.151 Sum_probs=260.3
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhh
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDC 144 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~ 144 (541)
.++||+||||||+|+++|+.|+++|++|+||||.+.... ...+..+++++.+.|+++|+++.
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~------------------~~r~~~l~~~s~~~l~~lGl~~~ 109 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVG------------------HDRAGALHIRTVETLDLRGLLDR 109 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCC------------------SSSCCCBCHHHHHHHHTTTCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCC------------------CceEEEECHHHHHHHHHcCChHH
Confidence 568999999999999999999999999999999876544 55667899999999999999998
Q ss_pred HhhccceeeeeeEEEECCeeeeecCCCCCC-CCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEE
Q 040732 145 VEEIDAHPVVGYALFKDGKITKTPYPLGNF-QANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGV 222 (541)
Q Consensus 145 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV 222 (541)
+........ +.. ..+. ....++.... .....++.+++..+.+.|.+.+.+. ++++++++ |+++..+++.+. |
T Consensus 110 l~~~~~~~~-~~~--~~~~-~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-gv~i~~~~~v~~l~~~~~~v~-v 183 (570)
T 3fmw_A 110 FLEGTQVAK-GLP--FAGI-FTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREA-GAEIPRGHEVTRLRQDAEAVE-V 183 (570)
T ss_dssp HTTSCCBCS-BCC--BTTB-CTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHH-TEECCBSCEEEECCBCSSCEE-E
T ss_pred HHhcCcccC-Cce--eCCc-ccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEcCCeEE-E
Confidence 876433221 100 1111 0001111111 1122456799999999999999886 89999997 999988776543 5
Q ss_pred EEEcCCCcEEEEEcCEEEEecCCCCcccccccCCCcccccceEEEEEeecCCCCCC-eeEEEEcCCCcEEE-EEccCCce
Q 040732 223 HYKTKDGQEHKSYAPLTIVCDGGFSNLRRSLCNPKVDIPSCFVGMALENCQLPVPN-HGHVVLTDPSPILF-YPISSSEV 300 (541)
Q Consensus 223 ~v~~~~g~~~~v~a~lvV~AdG~~S~vR~~l~~~~~~~~~~~~g~~~~~~~~p~~~-~~~~~~~~~~~~~~-~p~~~~~~ 300 (541)
++...+|+ .+++||+||+|||.+|.+|+.++.+.+...+...+++.. ...+.+. ...+.+.+.+++++ +|++++..
T Consensus 184 ~~~~~~G~-~~~~a~~vV~ADG~~S~vR~~lGi~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~G~~~~~~P~~~g~~ 261 (570)
T 3fmw_A 184 TVAGPSGP-YPVRARYGVGCDGGRSTVRRLAADRFPGTEATVRALIGY-VTTPEREVPRRWERTPDGILVLAFPPEGGLG 261 (570)
T ss_dssp EEEETTEE-EEEEESEEEECSCSSCHHHHHTTCCCCCCCCCEEEEEEE-CCCCSCSSCCCCCCCCSSCEEECCCC-----
T ss_pred EEEeCCCc-EEEEeCEEEEcCCCCchHHHHcCCCCccceeeeEEEEEE-EEecCCCcceEEEecCCEEEEEEeecCCCeE
Confidence 55446773 346799999999999999999998777666666666553 2222222 11113456677777 89999877
Q ss_pred -EEEEEecCCCC---CCCCCchhHHHHHHHhcCCCCChhhHHHHHhhhhcC-CeeeccCccccCCCCCCCcEEEecccCC
Q 040732 301 -RCLVDVPAGQK---LPSIANGEMAKYLKTKVAPQIPDELRDAFISKVEKG-SIRTATNRSMPAAPKTTPGALLLGDAFN 375 (541)
Q Consensus 301 -~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~vvliGDAah 375 (541)
++++..+.... ....+.+++.+.+++.+...+. ..+.. ....++.....+.+|..+||+|+|||||
T Consensus 262 ~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---------~~~~~~~~~~~~~~~~~a~~~~~grv~LvGDAAH 332 (570)
T 3fmw_A 262 PGWSSSSTGHSPAADEGPVTLEDLGAAVARVRGTPLT---------LTEPVSWLSRFGDASRQAKRYRSGRVLLAGDAAH 332 (570)
T ss_dssp -CEEEEEESCC-----CCCCHHHHHHHTTSSSSCCCC---------CCSCCEEEEEECCCCEECSCSEETTEEECGGGTE
T ss_pred EEEEEEeCCCCccccccCCCHHHHHHHHHHHhhcccc---------cceeeeeeEEeecccccccccccCCEEEEEecce
Confidence 77776652221 1223444454444433221111 11222 4557788888888999999999999999
Q ss_pred CCCCCCCcchhHHHhhHHHHHHhccccCCCCChHHHHHHHHHHHHHhcChhHHHHHHHHHHHhhhcCCChHHHHHHHHHH
Q 040732 376 MRHPLTGGGMTVALSDVVVLRNLIKPLQDFHDAASLNQYLESFYTLRKPVASTINTLANSAYQVFSASSDEAREVMRQAS 455 (541)
Q Consensus 376 ~~~P~~GqG~~~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~~~~~~i~~ls~~l~~~~~~~~~~~~~~lr~~~ 455 (541)
.++|++|||+|+||+||.+|+++|+..... ...+.+|++|+++|++++..++..++.+..+|...+ +....+|+..
T Consensus 333 ~~~P~~GqG~n~gl~DA~~La~~La~~~~g---~~~~~lL~~Ye~eR~~~~~~~~~~s~~~~~l~~~~~-~~~~~lR~~~ 408 (570)
T 3fmw_A 333 VHFPIGGQGLNTGLQDAVNLGWKLAARVRG---WGSEELLDTYHDERHPVAERVLLNTRAQLALMRPDE-QHTTPLRGFV 408 (570)
T ss_dssp ECCCCSSCHHHHHHHHHHHHHHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCT-TTHHHHHHHH
T ss_pred ecCCCcCcCHhHHHHHHHHHHHHHHHHHcC---CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-hHHHHHHHHH
Confidence 999999999999999999999999875211 123579999999999999999999999999998653 3268899999
Q ss_pred HHHhhcCCCChHhHHHhhccCCCC
Q 040732 456 VDYLGLGGIYTSGAMALLSGLNPS 479 (541)
Q Consensus 456 ~~~~~~~~~~~~~~~~ll~g~~~~ 479 (541)
+..+ ..+......+..++|+..+
T Consensus 409 ~~l~-~~~~~~~~~~~~~~g~~~~ 431 (570)
T 3fmw_A 409 EELL-GTDEVNRYFTGMITGTDVR 431 (570)
T ss_dssp HHHT-TSHHHHHHHHHHHHSTTCC
T ss_pred HHHh-cCHHHHHHHHHHHhCCCcc
Confidence 8877 3444555556666666443
No 5
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3.7e-40 Score=342.20 Aligned_cols=359 Identities=21% Similarity=0.236 Sum_probs=250.5
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
++||+||||||+|+++|+.|+++|++|+|+||.+.... ...+..+.+++.+.|+++|+++.+
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~------------------~~~~~~l~~~~~~~l~~~g~~~~~ 67 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERA------------------INGADLLKPAGIRVVEAAGLLAEV 67 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---------------------CCCCEECHHHHHHHHHTTCHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCc------------------cCceeeECchHHHHHHHcCcHHHH
Confidence 48999999999999999999999999999999875433 566778999999999999999887
Q ss_pred hhccceeeeeeEEEEC-CeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEE
Q 040732 146 EEIDAHPVVGYALFKD-GKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVH 223 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~ 223 (541)
... ..+..++.++.. +.. ...++.........++.++|.+|.+.|.+.+.+.++++++.++ |+++..+++.+.+ .
T Consensus 68 ~~~-~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g-~ 144 (399)
T 2x3n_A 68 TRR-GGRVRHELEVYHDGEL-LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAID-Q 144 (399)
T ss_dssp HHT-TCEEECEEEEEETTEE-EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEE-E
T ss_pred HHh-CCCcceeEEEeCCCCE-EEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEE-E
Confidence 653 334455555543 422 1222222222233467899999999999999887789999987 9999887764320 4
Q ss_pred EEcCCCcEEEEEcCEEEEecCCCCcccccccCCCccc--ccce--EEEEEe-ecCCCCCCeeEEEEcC-CCcEEEEEccC
Q 040732 224 YKTKDGQEHKSYAPLTIVCDGGFSNLRRSLCNPKVDI--PSCF--VGMALE-NCQLPVPNHGHVVLTD-PSPILFYPISS 297 (541)
Q Consensus 224 v~~~~g~~~~v~a~lvV~AdG~~S~vR~~l~~~~~~~--~~~~--~g~~~~-~~~~p~~~~~~~~~~~-~~~~~~~p~~~ 297 (541)
+++++|++ ++||+||+|||.+|.+|+.++.+.... .... .++... ....|. .. .++.+ +++++++|+++
T Consensus 145 v~~~~g~~--~~ad~vV~AdG~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~p~~~ 219 (399)
T 2x3n_A 145 VRLNDGRV--LRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCVAER--NR-LYVDSQGGLAYFYPIGF 219 (399)
T ss_dssp EEETTSCE--EEEEEEEECCCTTCHHHHHTSCCCCCCCCCSSCEEEEEEECCHHHHHC--EE-EEECTTSCEEEEEEETT
T ss_pred EEECCCCE--EECCEEEECCCCChHHHHHhCCCccccCCCCCCceEEEEEEecCCCCC--cc-EEEcCCCcEEEEEEcCC
Confidence 55677874 569999999999999999998654333 2333 444332 111222 23 67778 89999999998
Q ss_pred CceEEEEEecCCCCCC----CCCchhHHHHHHHhcCCCCChhhH-HHHHhhhhcCCeeeccCcc-ccCCCCCCCcEEEec
Q 040732 298 SEVRCLVDVPAGQKLP----SIANGEMAKYLKTKVAPQIPDELR-DAFISKVEKGSIRTATNRS-MPAAPKTTPGALLLG 371 (541)
Q Consensus 298 ~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~vvliG 371 (541)
+.+.|.+.++ .+... ..+.+++.+.+.. +++.+. ..+ +.........+|... .+..+|..+|++|+|
T Consensus 220 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvG 292 (399)
T 2x3n_A 220 DRARLVVSFP-REEARELMADTRGESLRRRLQR-----FVGDESAEAI-AAVTGTSRFKGIPIGYLNLDRYWADNVAMLG 292 (399)
T ss_dssp TEEEEEEECC-HHHHHHHHHSTTSHHHHHHHHT-----TCCGGGHHHH-HTCCCSTTCEECCCCCEECSCSEETTEEECG
T ss_pred CEEEEEEEeC-ccccccccccCCHHHHHHHHhh-----cCCcchhhHH-hcCCccceEEechhhcccccccccCcEEEEe
Confidence 7666665444 11100 1234455555542 333442 222 222212445667666 567788899999999
Q ss_pred ccCCCCCCCCCcchhHHHhhHHHHHHhccccCCCCChHHHHHHHHHHHHHhcChhHHHHHHHHHHHhhhcCCChHHHHHH
Q 040732 372 DAFNMRHPLTGGGMTVALSDVVVLRNLIKPLQDFHDAASLNQYLESFYTLRKPVASTINTLANSAYQVFSASSDEAREVM 451 (541)
Q Consensus 372 DAah~~~P~~GqG~~~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~~~~~~i~~ls~~l~~~~~~~~~~~~~~l 451 (541)
||||.++|++|||+|+||+||..|+++|...... +.++..+|+.|+++|++++..++..++.+.++|... ++....+
T Consensus 293 DAAh~~~P~~GqG~~~al~da~~La~~L~~~~~~--~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~-~~~~~~~ 369 (399)
T 2x3n_A 293 DAIHNVHPITGQGMNLAIEDASALADALDLALRD--ACALEDALAGYQAERFPVNQAIVSYGHALATSLEDR-QRFAGVF 369 (399)
T ss_dssp GGTEECCGGGCCHHHHHHHHHHHHHHHHHHHHTT--SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-HHHHHHH
T ss_pred chhccCCCcccccHHHHHHHHHHHHHHHHhhhcc--cchHHHHHHHHHHHhccHHHHHHHHHHHhhhhhccc-CchHHHH
Confidence 9999999999999999999999999999875321 123578999999999999999999999999998765 4555666
Q ss_pred HHHHHHHhhc
Q 040732 452 RQASVDYLGL 461 (541)
Q Consensus 452 r~~~~~~~~~ 461 (541)
+..+..+..
T Consensus 370 -~~~~~~~~~ 378 (399)
T 2x3n_A 370 -DTALQGSSR 378 (399)
T ss_dssp -HC-------
T ss_pred -HHHHhhhcC
Confidence 777665543
No 6
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=100.00 E-value=6e-39 Score=352.19 Aligned_cols=349 Identities=19% Similarity=0.233 Sum_probs=244.9
Q ss_pred CCCcEEEECCChHHHHHHHHHhh-----CCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGT-----DGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVEL 139 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~-----~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~l 139 (541)
.++||+||||||+||++|+.|++ +|++|+||||.+.... .+.+..+++++++.|+++
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~------------------~gra~~l~~~tle~l~~l 68 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVY------------------NGQADGLQCRTLESLKNL 68 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCC------------------SCSCCEECHHHHHHHHTT
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCC------------------CCceeEEChHHHHHHHHC
Confidence 35899999999999999999999 9999999999875444 455667999999999999
Q ss_pred CchhhHhhccceeeeeeEEEECC---eeee-ecCCCCC-CCCCccceeecchHHHHHHHHHHHcCC--CeEEEeCe-EEE
Q 040732 140 GLDDCVEEIDAHPVVGYALFKDG---KITK-TPYPLGN-FQANVAGRSFHNGRFIQRMREKAASLP--NVRMEEGT-VTS 211 (541)
Q Consensus 140 gl~~~~~~~~~~~~~g~~~~~~g---~~~~-~~~~~~~-~~~~~~~~~~~r~~l~~~L~~~~~~~~--~v~v~~~~-v~~ 211 (541)
|+++.+... ..+...+.++..+ .... ..++... .........++|..+++.|.+.+.+.+ ++++.+++ +++
T Consensus 69 Gl~~~l~~~-~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~ 147 (665)
T 1pn0_A 69 GLADKILSE-ANDMSTIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEK 147 (665)
T ss_dssp TCHHHHHTT-CBCCCEEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEE
T ss_pred CCHHHHHHh-ccccceEEEEeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEE
Confidence 999988753 3455566666532 1111 1111111 111223467999999999999998874 48999997 888
Q ss_pred eeeeC-------CeEEEEEEEc----------------------------------------CCCcEEEEEcCEEEEecC
Q 040732 212 LFEEN-------GIVKGVHYKT----------------------------------------KDGQEHKSYAPLTIVCDG 244 (541)
Q Consensus 212 l~~~~-------~~v~gV~v~~----------------------------------------~~g~~~~v~a~lvV~AdG 244 (541)
+..++ +..+.|++.. .+|+..+++||+||+|||
T Consensus 148 ~~~d~~~~~~~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG 227 (665)
T 1pn0_A 148 MEIDSSKAEDPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDG 227 (665)
T ss_dssp EEECGGGTTCTTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCC
T ss_pred EEecCcccccCCCCCEEEEEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccC
Confidence 87654 1223355543 356656788999999999
Q ss_pred CCCcccccccCCCcccccceEEEEEe---ecCCCCCCeeEEEE-cCCCcEEEEEccCCceEEEEEecCCC------CCCC
Q 040732 245 GFSNLRRSLCNPKVDIPSCFVGMALE---NCQLPVPNHGHVVL-TDPSPILFYPISSSEVRCLVDVPAGQ------KLPS 314 (541)
Q Consensus 245 ~~S~vR~~l~~~~~~~~~~~~g~~~~---~~~~p~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~------~~~~ 314 (541)
++|.+|++++.+.........+.++. ....|+......+. .++++++++|.+++.+++++..+... ....
T Consensus 228 ~~S~VR~~lg~~~~g~~~~~~~~v~d~~~~~~~p~~~~~~~~~~~~~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~~~ 307 (665)
T 1pn0_A 228 GHSWVRRTLGFEMIGEQTDYIWGVLDAVPASNFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQARAEKGGRVDRTK 307 (665)
T ss_dssp TTCHHHHHHTCCCEEEEEEEEEEEEEEEEECCCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEECC----------CC
T ss_pred CCCHHHHhcCCCCCCCCccEEEEEEEEEECCCCCCcceEEEEEeCCCceEEEEEcCCCEEEEEEEeCCccccccccCcCC
Confidence 99999999988655444333322222 22344332222333 35788999999999888888766322 1122
Q ss_pred CCchhHHHHHHHhcCCCCChhhHHHHHhhhhcCCeeeccCccccCCCCC-CCcEEEecccCCCCCCCCCcchhHHHhhHH
Q 040732 315 IANGEMAKYLKTKVAPQIPDELRDAFISKVEKGSIRTATNRSMPAAPKT-TPGALLLGDAFNMRHPLTGGGMTVALSDVV 393 (541)
Q Consensus 315 ~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vvliGDAah~~~P~~GqG~~~al~Da~ 393 (541)
.+.+++.+.+++.+.+... ++ .....+..++...+.+.+|. .+||+|+|||||.++|++|||||+||+||.
T Consensus 308 ~t~e~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~ 379 (665)
T 1pn0_A 308 FTPEVVIANAKKIFHPYTF-DV-------QQLDWFTAYHIGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTY 379 (665)
T ss_dssp CCHHHHHHHHHHHHTTSCC-EE-------EEEEEEEEEEEEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcccC-ce-------eeEEEEEeeeccceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHH
Confidence 3445555555554433211 00 01112344555566778898 799999999999999999999999999999
Q ss_pred HHHHhccccCCCCChHHHHHHHHHHHHHhcChhHHHHHHHHHHHhhhcCC
Q 040732 394 VLRNLIKPLQDFHDAASLNQYLESFYTLRKPVASTINTLANSAYQVFSAS 443 (541)
Q Consensus 394 ~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~~~~~~i~~ls~~l~~~~~~~ 443 (541)
+|+|+|+.+... ...+.+|++|+++|++++..++..++.+.++|+..
T Consensus 380 nLawkLa~vl~g---~a~~~lL~tYe~eR~p~a~~~i~~s~~~~~l~~~~ 426 (665)
T 1pn0_A 380 NLGWKLGLVLTG---RAKRDILKTYEEERQPFAQALIDFDHQFSRLFSGR 426 (665)
T ss_dssp HHHHHHHHHHTT---CBCGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHcC---CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999875321 12356899999999999999999999999999765
No 7
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=100.00 E-value=1.2e-38 Score=330.23 Aligned_cols=376 Identities=18% Similarity=0.186 Sum_probs=255.4
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCC--CCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchh
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQ--PDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDD 143 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~ 143 (541)
++||+||||||+|+++|+.|+++|++|+|+||.+.. .. ...+..+.+++.+.|+++|+++
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~------------------~~~~g~l~~~~~~~l~~lg~~~ 63 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLG------------------RIRAGVLEQGMVDLLREAGVDR 63 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHT------------------CCCCCEECHHHHHHHHHTTCCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccC------------------CCceEeECHHHHHHHHHcCCcH
Confidence 479999999999999999999999999999998631 01 1223358899999999999998
Q ss_pred hHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEE
Q 040732 144 CVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGV 222 (541)
Q Consensus 144 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV 222 (541)
.+... ..+..++.++..+......++. ......++.+++..+.+.|.+.+.+. +++++.++ |+++..+++..+.|
T Consensus 64 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~-g~~i~~~~~v~~i~~~~~~~~~v 139 (394)
T 1k0i_A 64 RMARD-GLVHEGVEIAFAGQRRRIDLKR--LSGGKTVTVYGQTEVTRDLMEAREAC-GATTVYQAAEVRLHDLQGERPYV 139 (394)
T ss_dssp HHHHH-CEEESCEEEEETTEEEEECHHH--HHTSCCEEECCHHHHHHHHHHHHHHT-TCEEESSCEEEEEECTTSSSCEE
T ss_pred HHHhc-CCccceEEEEECCceEEecccc--ccCCCceEEechHHHHHHHHHHHHhc-CCeEEeceeEEEEEEecCCceEE
Confidence 88753 3445566666655443332211 01122456778889999999998876 89999987 99988754322234
Q ss_pred EEEcCCCcEEEEEcCEEEEecCCCCcccccccCCCcccccce--EEEEEeecCCCCC-CeeEEEEcCCCcEEEEEccCCc
Q 040732 223 HYKTKDGQEHKSYAPLTIVCDGGFSNLRRSLCNPKVDIPSCF--VGMALENCQLPVP-NHGHVVLTDPSPILFYPISSSE 299 (541)
Q Consensus 223 ~v~~~~g~~~~v~a~lvV~AdG~~S~vR~~l~~~~~~~~~~~--~g~~~~~~~~p~~-~~~~~~~~~~~~~~~~p~~~~~ 299 (541)
++. .+|++.+++||+||+|||.+|.+|+.++.+........ .++.......+.. ........+++.+++.|.+++.
T Consensus 140 ~~~-~~g~~~~~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 218 (394)
T 1k0i_A 140 TFE-RDGERLRLDCDYIAGCDGFHGISRQSIPAERLKVFERVYPFGWLGLLADTPPVSHELIYANHPRGFALCSQRSATR 218 (394)
T ss_dssp EEE-ETTEEEEEECSEEEECCCTTCSTGGGSCGGGCEEEEEEEEEEEEEEEESSCCSCSSCEEECCTTCCEEEEEEETTE
T ss_pred EEe-cCCcEEEEEeCEEEECCCCCcHHHHhcCccccccccccccceeEEEecCCCCCccceEEEEcCCceEEEEecCCCc
Confidence 442 47775567899999999999999999865321110011 1111111122221 2222223345566666667777
Q ss_pred eEEEEEecCCCCCCCCCchhHHHHHHHhcCCCCChhhHHHHHhhhhcC---CeeeccCccccCCCCCCCcEEEecccCCC
Q 040732 300 VRCLVDVPAGQKLPSIANGEMAKYLKTKVAPQIPDELRDAFISKVEKG---SIRTATNRSMPAAPKTTPGALLLGDAFNM 376 (541)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~vvliGDAah~ 376 (541)
.++++..+.......++.++..+.+.+.+ ..... ..+... ....+|.......+|..+|++|+|||||.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAh~ 290 (394)
T 1k0i_A 219 SQYYVQVPLSEKVEDWSDERFWTELKARL----PSEVA----EKLVTGPSLEKSIAPLRSFVVEPMQHGRLFLAGDAAHI 290 (394)
T ss_dssp EEEEEEECTTCCGGGCCHHHHHHHHHHTS----CHHHH----HHCCCCCEEEEEEEEEEEEEEECSEETTEEECGGGTEE
T ss_pred EEEEEEeCCCCCccccCHHHHHHHHHHhh----Ccccc----cccccCcceeeEEEEhhhhhccccccCCEEEEechhhc
Confidence 77777765332223344444445555432 22111 111111 11234554455667888999999999999
Q ss_pred CCCCCCcchhHHHhhHHHHHHhccccCCCCChHHHHHHHHHHHHHhcChhHHHHHHHHHHHhhhcCC--ChHHHHHHHHH
Q 040732 377 RHPLTGGGMTVALSDVVVLRNLIKPLQDFHDAASLNQYLESFYTLRKPVASTINTLANSAYQVFSAS--SDEAREVMRQA 454 (541)
Q Consensus 377 ~~P~~GqG~~~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~~~~~~i~~ls~~l~~~~~~~--~~~~~~~lr~~ 454 (541)
++|++|||+|+||+||..|+++|....... ...+|+.|+++|++++..++..++.+..++... ..+....+|+.
T Consensus 291 ~~P~~GqG~~~ai~da~~La~~L~~~~~~~----~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~r~~ 366 (394)
T 1k0i_A 291 VPPTGAKGLNLAASDVSTLYRLLLKAYREG----RGELLERYSAICLRRIWKAERFSWWMTSVLHRFPDTDAFSQRIQQT 366 (394)
T ss_dssp CCGGGTCHHHHHHHHHHHHHHHHHHHHHHC----CGGGGGGHHHHHHHHHHHHHHHHHHHHHHHSCCTTCCHHHHHHHHH
T ss_pred CCCcccchHHHHHHHHHHHHHHHHHHhccC----chHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHH
Confidence 999999999999999999999997642111 245899999999999999999998877776533 24778899999
Q ss_pred HHHHhhcCCCChHhHHHhhccC
Q 040732 455 SVDYLGLGGIYTSGAMALLSGL 476 (541)
Q Consensus 455 ~~~~~~~~~~~~~~~~~ll~g~ 476 (541)
++..+...+......+..++|+
T Consensus 367 ~l~~~~~~~~~~~~~~~~~~g~ 388 (394)
T 1k0i_A 367 ELEYYLGSEAGLATIAENYVGL 388 (394)
T ss_dssp HHHHHHHCHHHHHHHHHHHSCC
T ss_pred HHHhhcCCHHHHHHHHHHhcCC
Confidence 9999988887888888888887
No 8
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=100.00 E-value=9.3e-38 Score=342.20 Aligned_cols=350 Identities=17% Similarity=0.191 Sum_probs=235.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHhh-CCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCch
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGT-DGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLD 142 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~-~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~ 142 (541)
+..+||+||||||+|+++|+.|++ +|++|+||||.+.... ...+..+++++++.|+++|+.
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~------------------~g~a~~l~~~t~e~l~~lGl~ 91 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPME------------------LGQADGIACRTMEMFEAFEFA 91 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCS------------------SCSCCEECHHHHHHHHHTTCH
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCC------------------CCceeeeCHHHHHHHHHcCcH
Confidence 356899999999999999999999 9999999999875544 455667999999999999999
Q ss_pred hhHhhccceeeeeeEEEEC-----Ceeeee-cCCCCC-CCCCccceeecchHHHHHHHHHHHcCC-CeEEEeCe-EEEee
Q 040732 143 DCVEEIDAHPVVGYALFKD-----GKITKT-PYPLGN-FQANVAGRSFHNGRFIQRMREKAASLP-NVRMEEGT-VTSLF 213 (541)
Q Consensus 143 ~~~~~~~~~~~~g~~~~~~-----g~~~~~-~~~~~~-~~~~~~~~~~~r~~l~~~L~~~~~~~~-~v~v~~~~-v~~l~ 213 (541)
+.+... ..+...+.++.. +..... .++... .......+.+++..+++.|.+.+.+.+ ++++++++ |+++.
T Consensus 92 ~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~ 170 (639)
T 2dkh_A 92 DSILKE-ACWINDVTFWKPDPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVK 170 (639)
T ss_dssp HHHHHH-SEEECEEEEEEECTTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEE
T ss_pred HHHHHh-cccccceEEECCCCCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEE
Confidence 887653 334445555542 221110 111100 111223467899999999999999986 56899987 99998
Q ss_pred eeCC---eEEEEEEEc----CCCcEEEEEcCEEEEecCCCCcccccccCCCcccccceEEEEEe---ecCCCCCCeeEEE
Q 040732 214 EENG---IVKGVHYKT----KDGQEHKSYAPLTIVCDGGFSNLRRSLCNPKVDIPSCFVGMALE---NCQLPVPNHGHVV 283 (541)
Q Consensus 214 ~~~~---~v~gV~v~~----~~g~~~~v~a~lvV~AdG~~S~vR~~l~~~~~~~~~~~~g~~~~---~~~~p~~~~~~~~ 283 (541)
.+++ ..+.|++.+ .+|+..+++||+||+|||.+|.+|++++.+...........+.. ...+|.......+
T Consensus 171 ~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~ 250 (639)
T 2dkh_A 171 VDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAWGVMDVLAVTDFPDVRYKVAI 250 (639)
T ss_dssp ECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCEEEEEEEEEECCTTTTSEEEE
T ss_pred ECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceEEEEEEEEccCCCccceeEEE
Confidence 7652 223455554 36766678899999999999999999987654333222212221 2344432222223
Q ss_pred EcCCCcEEEEEccCC-ceEEEEEecCC-CC----CCCCCchhHHHHHHHhcCCCCChhhHHHHHhhhhcCCeeeccCccc
Q 040732 284 LTDPSPILFYPISSS-EVRCLVDVPAG-QK----LPSIANGEMAKYLKTKVAPQIPDELRDAFISKVEKGSIRTATNRSM 357 (541)
Q Consensus 284 ~~~~~~~~~~p~~~~-~~~~~~~~~~~-~~----~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 357 (541)
..++++++++|.+++ .+++++..+.. .. ....+.+++.+.+++.+.+... ++ .....+..++....
T Consensus 251 ~~~~g~~~~~P~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~ 322 (639)
T 2dkh_A 251 QSEQGNVLIIPREGGHLVRFYVEMDKLDADERVASRNITVEQLIATAQRVLHPYKL-EV-------KNVPWWSVYEIGQR 322 (639)
T ss_dssp EETTEEEEEEECTTSSCEEEEEECC-----------CCCHHHHHHHHHHHHTTSCE-EE-------EEEEEEEEECCCCE
T ss_pred EcCCceEEEEEcCCCcEEEEEEECCCcCcccccccCCCCHHHHHHHHHHHhCcccC-cc-------eeeeEEEecccccc
Confidence 336788999999988 67777766521 11 1223444555555444332110 00 00112234444445
Q ss_pred cCCCCC------------CCcEEEecccCCCCCCCCCcchhHHHhhHHHHHHhccccCCCCChHHHHHHHHHHHHHhcCh
Q 040732 358 PAAPKT------------TPGALLLGDAFNMRHPLTGGGMTVALSDVVVLRNLIKPLQDFHDAASLNQYLESFYTLRKPV 425 (541)
Q Consensus 358 ~~~~~~------------~~~vvliGDAah~~~P~~GqG~~~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~~~ 425 (541)
.+.+|. .+||+|+|||||.++|++|||||+||+||.+|+|+|+.+... ...+.+|++|+++|+++
T Consensus 323 ~a~~~~~~~~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g---~a~~~lL~~Ye~eR~~~ 399 (639)
T 2dkh_A 323 ICAKYDDVVDAVATPDSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRK---QCAPELLHTYSSERQVV 399 (639)
T ss_dssp ECSCSBSCCCSSCCTTSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTT---SBCGGGGHHHHHHHHHH
T ss_pred hhhhhhccccccccccCccCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcC---CCcHHHHHHHHHHHHHH
Confidence 566666 899999999999999999999999999999999999875321 12246899999999999
Q ss_pred hHHHHHHHHHHHhhhcCC
Q 040732 426 ASTINTLANSAYQVFSAS 443 (541)
Q Consensus 426 ~~~i~~ls~~l~~~~~~~ 443 (541)
++.++..++.+.++|+..
T Consensus 400 a~~~~~~s~~~~~~~~~~ 417 (639)
T 2dkh_A 400 AQQLIDFDREWAKMFSDP 417 (639)
T ss_dssp HHHHHHHHHHSCC-----
T ss_pred HHHHHHHHHHHHHHhcCC
Confidence 999999999988888654
No 9
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=100.00 E-value=1.8e-37 Score=334.35 Aligned_cols=358 Identities=16% Similarity=0.095 Sum_probs=240.9
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhh
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDC 144 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~ 144 (541)
..+||+||||||+|+++|+.|+++|++|+||||.+.... ...+..+++++++.|+++|+.+.
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~------------------~~~~~~l~~~~~~~l~~lGl~~~ 86 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTIT------------------HPRVGTIGPRSMELFRRWGVAKQ 86 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCS------------------SCCCCEECHHHHHHHHHTTCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC------------------CCceeeeCHHHHHHHHHcCChHH
Confidence 458999999999999999999999999999999975544 45566789999999999999988
Q ss_pred Hhhccceee--eeeEEEE--CCee-eeecCCCCC-----CCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEee
Q 040732 145 VEEIDAHPV--VGYALFK--DGKI-TKTPYPLGN-----FQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLF 213 (541)
Q Consensus 145 ~~~~~~~~~--~g~~~~~--~g~~-~~~~~~~~~-----~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~ 213 (541)
+........ .+..++. .|.. ....++... ......++.++|..+++.|.+.+.+. +++++ |+++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~----v~~~~~v~~~~ 162 (549)
T 2r0c_A 87 IRTAGWPGDHPLDAAWVTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER----LRTRSRLDSFE 162 (549)
T ss_dssp HHTSSCCTTSBCCEEEESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG----EECSEEEEEEE
T ss_pred HHhhcCCcccccceEEeccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh----cccCcEEEEEE
Confidence 875432111 1112221 1322 122222110 01222457789999999999999765 77787 99998
Q ss_pred eeCCeEEEEEEEc-CCCcEEEEEcCEEEEecCCCCcccccccCCCcccccceEEEEEe-ecC-CC-----CCCeeEEEEc
Q 040732 214 EENGIVKGVHYKT-KDGQEHKSYAPLTIVCDGGFSNLRRSLCNPKVDIPSCFVGMALE-NCQ-LP-----VPNHGHVVLT 285 (541)
Q Consensus 214 ~~~~~v~gV~v~~-~~g~~~~v~a~lvV~AdG~~S~vR~~l~~~~~~~~~~~~g~~~~-~~~-~p-----~~~~~~~~~~ 285 (541)
.+++.+. |++.+ .+|+..+++||+||+|||.+|.+|+.++.+..........+... ... ++ .+...++++.
T Consensus 163 ~~~~~v~-v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (549)
T 2r0c_A 163 QRDDHVR-ATITDLRTGATRAVHARYLVACDGASSPTRKALGIDAPPRHRTQVFRNILFRAPELRSLLGERAALFFFLML 241 (549)
T ss_dssp ECSSCEE-EEEEETTTCCEEEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEEEEEECTTHHHHHGGGCCSEEEEEE
T ss_pred EeCCEEE-EEEEECCCCCEEEEEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEEEEEECCchHHhcCCCCceEEEEEC
Confidence 8776543 55544 34765668899999999999999999987655444333322221 111 10 1223344455
Q ss_pred CC-CcEEEEEccCCceEEEEEecCCCCCCCCCchhHHHHHHHhcCCCCChhhHHHHHhhhhcCCeeeccCccccCCCCCC
Q 040732 286 DP-SPILFYPISSSEVRCLVDVPAGQKLPSIANGEMAKYLKTKVAPQIPDELRDAFISKVEKGSIRTATNRSMPAAPKTT 364 (541)
Q Consensus 286 ~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (541)
++ ++++++|++++. +|.+.++. .... .+.++..+.+++.+.+.++. +......|+.....+.+|..
T Consensus 242 p~~~~~~~~p~~~~~-~~~~~~~~-~~~~-~~~~~~~~~l~~~~~~~~~~----------~~~~~~~~~~~~~~a~~~~~ 308 (549)
T 2r0c_A 242 SSSLRFPLRALDGRG-LYRLTVGV-DDAS-KSTMDSFELVRRAVAFDTEI----------EVLSDSEWHLTHRVADSFSA 308 (549)
T ss_dssp ETTEEEEEEESSSSS-EEEEEEEC-STTC-CSCCCHHHHHHHHBCSCCCC----------EEEEEEEEEECCEECSCSEE
T ss_pred CCCcEEEEEEECCCc-EEEEEecC-CCCC-CCHHHHHHHHHHHhCCCCce----------eEEEEecchhHhhhHHhhcC
Confidence 65 688999997643 23333342 2122 56677778887766542220 11123455666667888999
Q ss_pred CcEEEecccCCCCCCCCCcchhHHHhhHHHHHHhccccCCCCChHHHHHHHHHHHHHhcChhHHHHHHHHHHHhhhcCC-
Q 040732 365 PGALLLGDAFNMRHPLTGGGMTVALSDVVVLRNLIKPLQDFHDAASLNQYLESFYTLRKPVASTINTLANSAYQVFSAS- 443 (541)
Q Consensus 365 ~~vvliGDAah~~~P~~GqG~~~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~~~~~~i~~ls~~l~~~~~~~- 443 (541)
+||+|+|||||.++|++|||||+||+||.+|+|+|+..... ...+.+|++|+++|++++..++..+..+..++...
T Consensus 309 grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g---~a~~~lL~~Y~~eR~~~a~~~~~~s~~~~~~~~~~~ 385 (549)
T 2r0c_A 309 GRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAATLRG---WAGPGLLATYEEERRPVAITSLEEANVNLRRTMDRE 385 (549)
T ss_dssp TTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHHHHHT---CSCTTTTHHHHHHHHHHHHHHHHC----------CC
T ss_pred CcEEEEccccccCCCccCCccccccHHHHHHHHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 99999999999999999999999999999999999875211 11245899999999999999999999998887642
Q ss_pred -------ChHHHHHHHHHHHHHhhc
Q 040732 444 -------SDEAREVMRQASVDYLGL 461 (541)
Q Consensus 444 -------~~~~~~~lr~~~~~~~~~ 461 (541)
+++....+|+.+.+++..
T Consensus 386 ~~~~~~~~~~~~~~~R~~~~~~~~~ 410 (549)
T 2r0c_A 386 LPPGLHDDGPRGERIRAAVAEKLER 410 (549)
T ss_dssp CCTTTTCCSHHHHHHHHHHHHHHHH
T ss_pred ccccccccCcchHHHHHHHHHHHHh
Confidence 245667888988888764
No 10
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=100.00 E-value=1.6e-38 Score=330.41 Aligned_cols=344 Identities=15% Similarity=0.178 Sum_probs=211.7
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhHh
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCVE 146 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~~ 146 (541)
++|+||||||+||++|+.|+++|++|+|+||++.+.... .+.+..+++++++.|+++|+.+.+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~----------------~G~~i~l~~~~~~~L~~lg~~~~~~ 65 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSIL----------------PGYGIHINSFGKQALQECLPAENWL 65 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSC----------------CCCEEEECHHHHHHHHHHSCHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCC----------------CceEEeeCHHHHHHHHHcCChHHHH
Confidence 579999999999999999999999999999987654411 3445678999999999999987665
Q ss_pred hccc--eee-eeeEEEECC-eeeeecCCCC---CCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCe
Q 040732 147 EIDA--HPV-VGYALFKDG-KITKTPYPLG---NFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGI 218 (541)
Q Consensus 147 ~~~~--~~~-~g~~~~~~g-~~~~~~~~~~---~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~ 218 (541)
.+.. ... ....++... .......... ........+.++|..|.+.|.+.+ +.++++++ ++++.+.++.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~----~~~v~~~~~v~~~~~~~~~ 141 (412)
T 4hb9_A 66 AFEEASRYIGGQSRFYNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGL----ANTIQWNKTFVRYEHIENG 141 (412)
T ss_dssp HHHHHCEEECCCCEEECTTSCEEEC--------------CEEEEEHHHHHHHHHTTC----TTTEECSCCEEEEEECTTS
T ss_pred HhhhhhcccCcceeEecCCcceecccCCccccccccccccceEeeHHHHHHHHHhhc----cceEEEEEEEEeeeEcCCC
Confidence 4321 111 111222221 1111110000 011122235689999998887754 23467776 9998875443
Q ss_pred EEEEEEEcCCCcEEEEEcCEEEEecCCCCcccccccCCCcccccceEEEEEeecC-------CCC---CCeeEEEEcC-C
Q 040732 219 VKGVHYKTKDGQEHKSYAPLTIVCDGGFSNLRRSLCNPKVDIPSCFVGMALENCQ-------LPV---PNHGHVVLTD-P 287 (541)
Q Consensus 219 v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~vR~~l~~~~~~~~~~~~g~~~~~~~-------~p~---~~~~~~~~~~-~ 287 (541)
+|+++++||++. +||+||+|||.+|.+|+.++............+...... .+. ......++.. +
T Consensus 142 --~v~v~~~dG~~~--~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (412)
T 4hb9_A 142 --GIKIFFADGSHE--NVDVLVGADGSNSKVRKQYLPFIERFDVGVSMIIGRARLTPALTALLPQNFRDGTPNSIVPKSP 217 (412)
T ss_dssp --CEEEEETTSCEE--EESEEEECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECCHHHHHHSCGGGTSSCCEEECCSSS
T ss_pred --eEEEEECCCCEE--EeeEEEECCCCCcchHHHhCCCccccccceeEEEEEEecchhhhcchhhhhccCCcceEeecCC
Confidence 356778899864 599999999999999999977554444333333221100 000 0001111111 1
Q ss_pred CcE----E--------EEEccCCc--eEEEEEecC---CCCCCCCCchhHHHHHHHhcCCCCChhhHHHHHhhhhcCCee
Q 040732 288 SPI----L--------FYPISSSE--VRCLVDVPA---GQKLPSIANGEMAKYLKTKVAPQIPDELRDAFISKVEKGSIR 350 (541)
Q Consensus 288 ~~~----~--------~~p~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 350 (541)
... + .++..+.. ..+...... .+.......+...+.+++.+. .+.+.+.+.+.. .+...+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~li~~-~~~~~~~ 295 (412)
T 4hb9_A 218 DWLFISMWRAPVNIHVEASLAEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMI-SWDPSLHTLVQQ-SDMENIS 295 (412)
T ss_dssp EEEEEEEEEEESCTTSCGGGCCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTT-TSCHHHHHHHHT-SCTTCCE
T ss_pred CcceeeeeecCCceeEEEeccCCCceEEEEEecccccccccccccchHHHHHHHHHHhc-cCChHHHHHHHh-cccceec
Confidence 111 1 11111111 111111110 111223344556666666554 455566554432 2223333
Q ss_pred eccCccc-cCCCCCCCcEEEecccCCCCCCCCCcchhHHHhhHHHHHHhccccCCCCChHHHHHHHHHHHHHhcChhHHH
Q 040732 351 TATNRSM-PAAPKTTPGALLLGDAFNMRHPLTGGGMTVALSDVVVLRNLIKPLQDFHDAASLNQYLESFYTLRKPVASTI 429 (541)
Q Consensus 351 ~~~~~~~-~~~~~~~~~vvliGDAah~~~P~~GqG~~~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~~~~~~i 429 (541)
.+..... +..+|..|||+|+|||||.++|++|||+|+||+||.+|+++|+.... ..+++.++|+.|+++|++++..+
T Consensus 296 ~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~--~~~~~~~aL~~Ye~~R~~~~~~~ 373 (412)
T 4hb9_A 296 PLHLRSMPHLLPWKSSTVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVAS--GHEELVKAISDYEQQMRAYANEI 373 (412)
T ss_dssp EEEEEECCCCCCCCCCSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHT--TSSCHHHHHHHHHHHHHHHHHHH
T ss_pred cchhccccccccccccCEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHH
Confidence 3333332 34578999999999999999999999999999999999999987532 22346789999999999999999
Q ss_pred HHHHHHHHh
Q 040732 430 NTLANSAYQ 438 (541)
Q Consensus 430 ~~ls~~l~~ 438 (541)
+..|.....
T Consensus 374 ~~~s~~~~~ 382 (412)
T 4hb9_A 374 VGISLRSAQ 382 (412)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 998876654
No 11
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=100.00 E-value=2.4e-37 Score=322.19 Aligned_cols=366 Identities=20% Similarity=0.223 Sum_probs=222.7
Q ss_pred CCCCCcEEEECCChHHHHHHHHHhhCCCc-EEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCc
Q 040732 63 SVAGPDVIVVGAGVAGAALAHTLGTDGRR-VHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGL 141 (541)
Q Consensus 63 ~~~~~dVvIVGaG~aGl~~A~~La~~G~~-V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl 141 (541)
|+.++||+||||||+|+++|+.|+++|++ |+|+||.+.... ...+..+.+++.+.|+++|+
T Consensus 1 M~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~------------------~g~g~~l~~~~~~~l~~lg~ 62 (410)
T 3c96_A 1 MSEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRP------------------LGVGINIQPAAVEALAELGL 62 (410)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCC------------------CSCEEEECHHHHHHHHHTTC
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCccc------------------ceeEEEEChHHHHHHHHCCC
Confidence 34568999999999999999999999999 999999875544 45567789999999999999
Q ss_pred hhhHhhccceeeeeeEEEEC-CeeeeecCCCC-CCCCCccceeecchHHHHHHHHHHHc-CCCeEEEeCe-EEEeeeeCC
Q 040732 142 DDCVEEIDAHPVVGYALFKD-GKITKTPYPLG-NFQANVAGRSFHNGRFIQRMREKAAS-LPNVRMEEGT-VTSLFEENG 217 (541)
Q Consensus 142 ~~~~~~~~~~~~~g~~~~~~-g~~~~~~~~~~-~~~~~~~~~~~~r~~l~~~L~~~~~~-~~~v~v~~~~-v~~l~~~~~ 217 (541)
++.+.... .+...+.++.. |... ...+.. ........+.++|..|.+.|.+.+.+ .+.++++.++ |+++.. ++
T Consensus 63 ~~~l~~~~-~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~ 139 (410)
T 3c96_A 63 GPALAATA-IPTHELRYIDQSGATV-WSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RD 139 (410)
T ss_dssp HHHHHHHS-EEECEEEEECTTSCEE-EEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ET
T ss_pred hHHHHhhC-CCcceEEEEcCCCCEE-eeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CC
Confidence 98887642 34444544432 3221 111100 00111234679999999999999876 3456788887 999887 44
Q ss_pred eEEEEEEEc-CCCcEEEEEcCEEEEecCCCCcccccccCCCcccccceEEEEEe----ecCCCCCCeeEEEEcC--CCcE
Q 040732 218 IVKGVHYKT-KDGQEHKSYAPLTIVCDGGFSNLRRSLCNPKVDIPSCFVGMALE----NCQLPVPNHGHVVLTD--PSPI 290 (541)
Q Consensus 218 ~v~gV~v~~-~~g~~~~v~a~lvV~AdG~~S~vR~~l~~~~~~~~~~~~g~~~~----~~~~p~~~~~~~~~~~--~~~~ 290 (541)
.+. |++.+ .+|+..+++||+||+|||.+|.+|+.++.... ...+.+.... ......+....++++. ++++
T Consensus 140 ~v~-v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (410)
T 3c96_A 140 GRV-LIGARDGHGKPQALGADVLVGADGIHSAVRAHLHPDQR--PLSHGGITMWRGVTEFDRFLDGKTMIVANDEHWSRL 216 (410)
T ss_dssp TEE-EEEEEETTSCEEEEEESEEEECCCTTCHHHHHHCTTCC--CCEEEEEEEEEEEEEESCCTTSSEEEEEECTTCCEE
T ss_pred ccE-EEEecCCCCCceEEecCEEEECCCccchhHHHhcCCCC--CCCcCCeeEEEeecccccccCCCeEEEecCCCCcEE
Confidence 332 44432 23755567899999999999999999865332 1223332221 1111112333445553 5789
Q ss_pred EEEEccC-----Cc--eEEEEEecCC-----CCCCCCCc-hhHHHHHHHhcCCCCCh--hhHHHHHhhhhcCCeeeccCc
Q 040732 291 LFYPISS-----SE--VRCLVDVPAG-----QKLPSIAN-GEMAKYLKTKVAPQIPD--ELRDAFISKVEKGSIRTATNR 355 (541)
Q Consensus 291 ~~~p~~~-----~~--~~~~~~~~~~-----~~~~~~~~-~~~~~~l~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~ 355 (541)
++||+++ +. +.|.+..+.. .....+.. ....+++. .+....++ .+.+.+.. ...+..+|..
T Consensus 217 ~~~p~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~i~~---~~~~~~~~~~ 292 (410)
T 3c96_A 217 VAYPISARHAAEGKSLVNWVCMVPSAAVGQLDNEADWNRDGRLEDVLP-FFADWDLGWFDIRDLLTR---NQLILQYPMV 292 (410)
T ss_dssp EEEECCHHHHTTTCEEEEEEEEEEHHHHCCCCSSCCTTCBCCHHHHHH-HHTTCCBTTBCHHHHHHT---CSEEEEEEEE
T ss_pred EEEecCCcccCCCCcEEEEEEEecCcccccCCCccccCCCCCHHHHHH-HhcCCCCchhHHHHHHhc---Ccccceeecc
Confidence 9999963 33 3344433211 01111111 12222222 22221111 12222211 1234455544
Q ss_pred cc-cCCCCCCCcEEEecccCCCCCCCCCcchhHHHhhHHHHHHhccccCCCCChHHHHHHHHHHHHHhcChhHHHHHHHH
Q 040732 356 SM-PAAPKTTPGALLLGDAFNMRHPLTGGGMTVALSDVVVLRNLIKPLQDFHDAASLNQYLESFYTLRKPVASTINTLAN 434 (541)
Q Consensus 356 ~~-~~~~~~~~~vvliGDAah~~~P~~GqG~~~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~~~~~~i~~ls~ 434 (541)
.. +..+|..+||+|+|||||.++|++|||+|+||+||.+|+++|... .+...+|+.|+++|++++..++..++
T Consensus 293 ~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~------~~~~~~L~~Ye~~r~~~~~~~~~~s~ 366 (410)
T 3c96_A 293 DRDPLPHWGRGRITLLGDAAHLMYPMGANGASQAILDGIELAAALARN------ADVAAALREYEEARRPTANKIILANR 366 (410)
T ss_dssp ECCCCSCCCBTTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHHC------SSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCccccccCCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhcc------CCHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 33 456888999999999999999999999999999999999999763 13578999999999999999888777
Q ss_pred -HHHhh--hcCCC-hHHHHHHHHHHHHHhhcC
Q 040732 435 -SAYQV--FSASS-DEAREVMRQASVDYLGLG 462 (541)
Q Consensus 435 -~l~~~--~~~~~-~~~~~~lr~~~~~~~~~~ 462 (541)
.++.+ +.... +...+++++.+.+|.+..
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (410)
T 3c96_A 367 EREKEEWAAASRPKTEKSAALEAITGSYRNQV 398 (410)
T ss_dssp HHHHHHHHHHHCC-------------------
T ss_pred HHHHhhhhhhhccCCCCHHHHHHHHHHhhhhc
Confidence 45555 32222 234577888888776643
No 12
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=100.00 E-value=1.8e-37 Score=334.03 Aligned_cols=371 Identities=19% Similarity=0.122 Sum_probs=249.4
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhh
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDC 144 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~ 144 (541)
.++||+||||||+|+++|+.|+++|++|+||||.+.... ...+..+++++.+.|+++|+++.
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~------------------~~~~~~l~~~~~~~l~~lGl~~~ 65 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSP------------------YPRAAGQNPRTMELLRIGGVADE 65 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCC------------------CCCSCCBCHHHHHHHHHTTCHHH
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC------------------CCccceECHHHHHHHHHcCCHHH
Confidence 468999999999999999999999999999999986554 55667899999999999999998
Q ss_pred Hhhccceeee--eeE--EEE--CCeeee-e--cCCC----CCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EE
Q 040732 145 VEEIDAHPVV--GYA--LFK--DGKITK-T--PYPL----GNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VT 210 (541)
Q Consensus 145 ~~~~~~~~~~--g~~--~~~--~g~~~~-~--~~~~----~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~ 210 (541)
+......... .+. ... .+.... . .++. .........+.+++..|++.|++.+.+. ++++++++ |+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-gv~i~~~~~v~ 144 (535)
T 3ihg_A 66 VVRADDIRGTQGDFVIRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKH-GGAIRFGTRLL 144 (535)
T ss_dssp HHHSCCSSCTTSCCEEEEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHT-TCEEESSCEEE
T ss_pred HHhhCCCcccccceeeeEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhC-CCEEEeCCEEE
Confidence 8764432111 111 111 122111 0 1110 0000122356789999999999999988 89999997 99
Q ss_pred EeeeeCC----eEEEEEEEcCCCcEEEEEcCEEEEecCCCCcccccccCCCcccccce--EEEEEeecCCCC----CC-e
Q 040732 211 SLFEENG----IVKGVHYKTKDGQEHKSYAPLTIVCDGGFSNLRRSLCNPKVDIPSCF--VGMALENCQLPV----PN-H 279 (541)
Q Consensus 211 ~l~~~~~----~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~vR~~l~~~~~~~~~~~--~g~~~~~~~~p~----~~-~ 279 (541)
++..+++ .+. |++.+.+| ..+++||+||+|||.+|.+|++++.+........ ..+.. ...++. .. .
T Consensus 145 ~i~~~~~~~~~~v~-v~~~~~~~-~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 221 (535)
T 3ihg_A 145 SFRQHDDDAGAGVT-ARLAGPDG-EYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIF-DADLSGIMEPGTTG 221 (535)
T ss_dssp EEEEECGGGCSEEE-EEEEETTE-EEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEE-ECCGGGTSCTTCCE
T ss_pred EEEECCCCccccEE-EEEEcCCC-eEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEE-eccChhhccCCceE
Confidence 9988765 433 45444444 4567899999999999999999987654433222 22222 222221 11 2
Q ss_pred eEEEEcCCCcEEEEEccC-CceEEEEEecCCC--CCCCCCchhHHHHHHHhcCCCCChhhHHHHHhhhhcCCeeeccCcc
Q 040732 280 GHVVLTDPSPILFYPISS-SEVRCLVDVPAGQ--KLPSIANGEMAKYLKTKVAPQIPDELRDAFISKVEKGSIRTATNRS 356 (541)
Q Consensus 280 ~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 356 (541)
...+..+.++.+++|+++ +.+.+.+..+... ..+..+.++..+.+++.+.....+ .+......|+...
T Consensus 222 ~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~~~---------~~~~~~~~~~~~~ 292 (535)
T 3ihg_A 222 WYYLHHPEFKGTFGPTDRPDRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDAPEVK---------PELVDIQGWEMAA 292 (535)
T ss_dssp EEEEECSSCEEEEEECSSTTEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCSSCC---------CEEEEEEEEEEEE
T ss_pred EEEEECCCceEEEEEecCCCEEEEEEeeCccccCccccCCHHHHHHHHHHHhCCCCCc---------eeEEEeeEeeeeE
Confidence 233445667888999987 4455555544221 123345556666666554321110 0112345567777
Q ss_pred ccCCCCCCCcEEEecccCCCCCCCCCcchhHHHhhHHHHHHhccccCCCCChHHHHHHHHHHHHHhcChhHHHHHHHHHH
Q 040732 357 MPAAPKTTPGALLLGDAFNMRHPLTGGGMTVALSDVVVLRNLIKPLQDFHDAASLNQYLESFYTLRKPVASTINTLANSA 436 (541)
Q Consensus 357 ~~~~~~~~~~vvliGDAah~~~P~~GqG~~~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~~~~~~i~~ls~~l 436 (541)
..+.+|..+||+|+|||||.++|++|||+|+||+||.+|+++|+.+... .....+|++|+++|++++..++..|...
T Consensus 293 ~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g---~~~~~lL~~Ye~eR~p~a~~~~~~s~~~ 369 (535)
T 3ihg_A 293 RIAERWREGRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQG---QAGAGLLDTYEDERKVAAELVVAEALAI 369 (535)
T ss_dssp EEESCSEETTEEECTTTTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTT---SSCTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECccccCCEEEEecccccCCCccCCccccccccHHHHHHHHHHHhcC---CCcHHHHHhhHHHHHHHHHHHHHHHHHh
Confidence 7788999999999999999999999999999999999999999875321 1124689999999999999999999998
Q ss_pred HhhhcCCChHHHHHHHHHHHHHhhcCCCChHhHH
Q 040732 437 YQVFSASSDEAREVMRQASVDYLGLGGIYTSGAM 470 (541)
Q Consensus 437 ~~~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~ 470 (541)
++.+.... ......+..+...+.++..+.++++
T Consensus 370 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~y~~~~~ 402 (535)
T 3ihg_A 370 YAQRMAPH-MAEVWDKSVGYPETLLGFRYRSSAV 402 (535)
T ss_dssp HHHHTCGG-GTTTSCCCCCHHHHHTSBCCCSTTC
T ss_pred hHhhcccc-cCcccccccccceeeeCcccCCCce
Confidence 87764321 1101112233344566666665544
No 13
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=100.00 E-value=3.5e-36 Score=312.06 Aligned_cols=329 Identities=18% Similarity=0.175 Sum_probs=225.8
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhh
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDC 144 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~ 144 (541)
.++||+||||||+|+++|+.|+++|++|+|+||.+..... ...|..+.+++.+.|+++|+.+
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~-----------------~~~g~~l~~~~~~~l~~~g~~~- 65 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSG-----------------FGTGIVVQPELVHYLLEQGVEL- 65 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCC-----------------CSCEEECCHHHHHHHHHTTCCG-
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCc-----------------cccccccChhHHHHHHHcCCcc-
Confidence 4689999999999999999999999999999998753110 4556678999999999999987
Q ss_pred HhhccceeeeeeEEEEC--CeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEE
Q 040732 145 VEEIDAHPVVGYALFKD--GKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKG 221 (541)
Q Consensus 145 ~~~~~~~~~~g~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~g 221 (541)
.. ...+..++.++.. +... ...+.. ...+++..+.+.|++.+ ++++++.++ |+++..+++.
T Consensus 66 -~~-~~~~~~~~~~~~~~~g~~~-~~~~~~-------~~~~~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~--- 129 (397)
T 2vou_A 66 -DS-ISVPSSSMEYVDALTGERV-GSVPAD-------WRFTSYDSIYGGLYELF---GPERYHTSKCLVGLSQDSET--- 129 (397)
T ss_dssp -GG-TCBCCCEEEEEETTTCCEE-EEEECC-------CCEEEHHHHHHHHHHHH---CSTTEETTCCEEEEEECSSC---
T ss_pred -cc-ccccccceEEEecCCCCcc-ccccCc-------ccccCHHHHHHHHHHhC---CCcEEEcCCEEEEEEecCCE---
Confidence 22 2334445555543 3221 111110 12367788989988876 478899887 9999877664
Q ss_pred EEEEcCCCcEEEEEcCEEEEecCCCCcccccccCCCcccccceEEEEEe-----ecCCCCC------CeeEEEEcCCCcE
Q 040732 222 VHYKTKDGQEHKSYAPLTIVCDGGFSNLRRSLCNPKVDIPSCFVGMALE-----NCQLPVP------NHGHVVLTDPSPI 290 (541)
Q Consensus 222 V~v~~~~g~~~~v~a~lvV~AdG~~S~vR~~l~~~~~~~~~~~~g~~~~-----~~~~p~~------~~~~~~~~~~~~~ 290 (541)
|++++.+|++ ++||+||+|||.+|.+|+.++ +. ...+.++... ...++.. ....+++++++++
T Consensus 130 v~v~~~~g~~--~~ad~vV~AdG~~S~vr~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (397)
T 2vou_A 130 VQMRFSDGTK--AEANWVIGADGGASVVRKRLL-GI---EPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLLDDGHL 203 (397)
T ss_dssp EEEEETTSCE--EEESEEEECCCTTCHHHHHHH-CC---CCEEEEEEEEEEEECTTSSCHHHHHHHTTEEEEEEETTEEE
T ss_pred EEEEECCCCE--EECCEEEECCCcchhHHHHhc-cC---CCCccceEEEEEEeeccccChhhhhhhcCceeEEecCCCEE
Confidence 5566778875 569999999999999999998 43 2233333222 1122211 2334556777788
Q ss_pred EEEEccCC------ceEEEEEecCCCCC--CCC-----------------CchhHHHHHHHhcCCCCChhhHHHHHhhhh
Q 040732 291 LFYPISSS------EVRCLVDVPAGQKL--PSI-----------------ANGEMAKYLKTKVAPQIPDELRDAFISKVE 345 (541)
Q Consensus 291 ~~~p~~~~------~~~~~~~~~~~~~~--~~~-----------------~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~ 345 (541)
.+||++++ ...+++..+..... ... ...+..+.+.+.+.+.+++ +.+.+...
T Consensus 204 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-- 280 (397)
T 2vou_A 204 IAYPIPGRENAESPRLNFQWYWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHNLRQFHSKGESLFKP-FRDLVLNA-- 280 (397)
T ss_dssp EEEEECCSSTTSCCEEEEEEEEECCTTHHHHHHTBCTTSCBCSSEECGGGCCHHHHHHHHHHHTTSCHH-HHHHHHHC--
T ss_pred EEEECCCCCCccceeEEEEEEecCCCccchhhhccCCCCcccccccCcccCCHHHHHHHHHHHHhhChH-HHHHHhcc--
Confidence 89998764 34455554422100 000 0122233333333334554 44333221
Q ss_pred cCCeeeccCccccCCCCCCCcEEEecccCCCCCCCCCcchhHHHhhHHHHHHhccccCCCCChHHHHHHHHHHHHHhcCh
Q 040732 346 KGSIRTATNRSMPAAPKTTPGALLLGDAFNMRHPLTGGGMTVALSDVVVLRNLIKPLQDFHDAASLNQYLESFYTLRKPV 425 (541)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~vvliGDAah~~~P~~GqG~~~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~~~ 425 (541)
.....++....++.+|..+||+|+|||||.++|++|||+|+||+||..|+++|... .++..+|+.|+++|+++
T Consensus 281 -~~~~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~------~~~~~~L~~Ye~~R~~~ 353 (397)
T 2vou_A 281 -SSPFVTVVADATVDRMVHGRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTKN------HDLRGSLQSWETRQLQQ 353 (397)
T ss_dssp -SSCEEEEEEEBCCSCSEETTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHHC------SCHHHHHHHHHHHHHHH
T ss_pred -CCcceeeeeeecCCceecCcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHH
Confidence 22234555555677899999999999999999999999999999999999999741 13468999999999999
Q ss_pred hHHHHHHHHHHHhhhcCC
Q 040732 426 ASTINTLANSAYQVFSAS 443 (541)
Q Consensus 426 ~~~i~~ls~~l~~~~~~~ 443 (541)
+..++..++.+..++...
T Consensus 354 ~~~~~~~s~~~~~~~~~~ 371 (397)
T 2vou_A 354 GHAYLNKVKKMASRLQHG 371 (397)
T ss_dssp HHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 999999999999888753
No 14
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=100.00 E-value=6.1e-36 Score=320.15 Aligned_cols=357 Identities=17% Similarity=0.158 Sum_probs=244.0
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhH-HHHHCCchh
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYL-KLVELGLDD 143 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~-~l~~lgl~~ 143 (541)
.++||+|||||++|+++|+.|+++|++|+||||.+.. . ...|+.+.+.... .++.+|+++
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~-~------------------~~~g~~~~~~~~~~~l~~lgl~~ 66 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFP-R------------------HQIGESLLPATVHGICAMLGLTD 66 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSS-C------------------CCSCCBCCHHHHTTHHHHTTCHH
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCC-C------------------CCCCcccCcchHHHHHHHhCcHH
Confidence 4589999999999999999999999999999998632 2 3445667777664 889999998
Q ss_pred hHhhccceeeeeeEEEECCee--eeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEE
Q 040732 144 CVEEIDAHPVVGYALFKDGKI--TKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVK 220 (541)
Q Consensus 144 ~~~~~~~~~~~g~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~ 220 (541)
.+............+...... ....+..........++.++|..|.+.|++.+.+. |++++.++ |+++..+++.+.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~-Gv~i~~~~~V~~v~~~~~~v~ 145 (512)
T 3e1t_A 67 EMKRAGFPIKRGGTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERK-GVDVRERHEVIDVLFEGERAV 145 (512)
T ss_dssp HHHTTTCCEECEEEEECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHT-TCEEESSCEEEEEEEETTEEE
T ss_pred HHHHcCCccccCceEEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhC-CCEEEcCCEEEEEEEECCEEE
Confidence 877654333333222222211 12223222223344578899999999999999885 89999996 999999989888
Q ss_pred EEEEEcCCCcEEEEEcCEEEEecCCCCcccccccCCCcccccceEEEEEe---ecCCCC--CCeeEEEEcCCCcEEEEEc
Q 040732 221 GVHYKTKDGQEHKSYAPLTIVCDGGFSNLRRSLCNPKVDIPSCFVGMALE---NCQLPV--PNHGHVVLTDPSPILFYPI 295 (541)
Q Consensus 221 gV~v~~~~g~~~~v~a~lvV~AdG~~S~vR~~l~~~~~~~~~~~~g~~~~---~~~~p~--~~~~~~~~~~~~~~~~~p~ 295 (541)
+|++.+.+|+..+++||+||+|||.+|.+|+.++.+.........++... ....+. .......+.+++++|++|+
T Consensus 146 gv~~~~~dG~~~~i~ad~VI~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Pl 225 (512)
T 3e1t_A 146 GVRYRNTEGVELMAHARFIVDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILSAAFQDGWFWYIPL 225 (512)
T ss_dssp EEEEECSSSCEEEEEEEEEEECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCSTTCTTSEEEEEETTEEEEEEEC
T ss_pred EEEEEeCCCCEEEEEcCEEEECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCCCCCcCceEEEEeCCceEEEEEe
Confidence 89998888986678899999999999999999965332222223333221 122332 2334455667889999999
Q ss_pred cCCceEEEEEecCCCCCCCCCchhHHHHHHHhcCCCCChhhHHHHHhhhhc-----CCeeeccCccccCCCCCCCcEEEe
Q 040732 296 SSSEVRCLVDVPAGQKLPSIANGEMAKYLKTKVAPQIPDELRDAFISKVEK-----GSIRTATNRSMPAAPKTTPGALLL 370 (541)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~vvli 370 (541)
+++...+.+.++. ....... ....+.+++... ..+.+.+.+...... +.+...+....+..+|..+|+++|
T Consensus 226 ~~~~~~vg~~~~~-~~~~~~~-~~~~~~~~~~l~--~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlv 301 (512)
T 3e1t_A 226 SDTLTSVGAVVSR-EAAEAIK-DGHEAALLRYID--RCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALV 301 (512)
T ss_dssp SSSEEEEEEEEEH-HHHTTTS-SCHHHHHHHHHH--TSHHHHHHHTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEEC
T ss_pred CCCeEEEEEEecH-HHhhhhc-CCHHHHHHHHHH--hCchHHHHHhcCccccccccccceeeccccccccccccCCEEEE
Confidence 9998777776652 1111111 112222222221 223344333222111 112222222224567778999999
Q ss_pred cccCCCCCCCCCcchhHHHhhHHHHHHhccccCCCCChHHHHHHHHHHHHHhcChhHHHHHHHHHHHhhhcCCChHH
Q 040732 371 GDAFNMRHPLTGGGMTVALSDVVVLRNLIKPLQDFHDAASLNQYLESFYTLRKPVASTINTLANSAYQVFSASSDEA 447 (541)
Q Consensus 371 GDAah~~~P~~GqG~~~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~~~~~~i~~ls~~l~~~~~~~~~~~ 447 (541)
|||||.++|++|||+|+|++||..|+++|..... ...+...+|+.|+++|+++...+..+...+|.+....+.+.
T Consensus 302 GDAAh~~~P~~GqG~~~Al~dA~~La~~L~~~l~--~~~~~~~aL~~Ye~~~~~~~~~~~~~~~~~y~~~~r~ds~f 376 (512)
T 3e1t_A 302 GDAACFVDPVFSSGVHLATYSALLVARAINTCLA--GEMSEQRCFEEFERRYRREYGNFYQFLVAFYDMNQDTDSYF 376 (512)
T ss_dssp GGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTCHH
T ss_pred echhhcCCCccccCHHHHHHHHHHHHHHHHHHHc--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHH
Confidence 9999999999999999999999999999987532 12345679999999999999999999999998876544343
No 15
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=4.9e-36 Score=309.78 Aligned_cols=341 Identities=19% Similarity=0.186 Sum_probs=220.6
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhh
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDC 144 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~ 144 (541)
++|||+||||||||+++|+.|+++|++|+|+||.+..+.. ..+|+.+.++ .++++|+...
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~-----------------~~~g~~l~~~---~l~~l~~~~~ 62 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSP-----------------VRCGEGLSKG---ILNEADIKAD 62 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCS-----------------CCSCCEEETH---HHHHTTCCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCC-----------------CceecccCHH---HHHHcCCCch
Confidence 4699999999999999999999999999999998754330 3345666654 4667776543
Q ss_pred HhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEE
Q 040732 145 VEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVH 223 (541)
Q Consensus 145 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~ 223 (541)
...+ ...+.+..++............ .......++.++|..|.+.|.+.+.+. |++++.++ |+++..+++.+.++.
T Consensus 63 ~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~R~~~~~~L~~~a~~~-G~~~~~~~~v~~~~~~~~~~~~v~ 139 (397)
T 3oz2_A 63 RSFI-ANEVKGARIYGPSEKRPIILQS-EKAGNEVGYVLERDKFDKHLAALAAKA-GADVWVKSPALGVIKENGKVAGAK 139 (397)
T ss_dssp TTTE-EEEESEEEEECTTCSSCEEEEC-SSSSCCCEEEECHHHHHHHHHHHHHHH-TCEEESSCCEEEEEEETTEEEEEE
T ss_pred hhhh-hcccceEEEEeCCCceEeeccc-cccCCceeEEEEHHHHHHHHHHHHHhc-CcEEeeeeeeeeeeeccceeeeee
Confidence 3222 2345555555433222111111 112334578899999999999999887 89999887 999999998887776
Q ss_pred EEcCCCcEEEEEcCEEEEecCCCCcccccccCCCcccccceEEE--EEeecCC-CCCCeeEEEEc---CCCcEEEEEccC
Q 040732 224 YKTKDGQEHKSYAPLTIVCDGGFSNLRRSLCNPKVDIPSCFVGM--ALENCQL-PVPNHGHVVLT---DPSPILFYPISS 297 (541)
Q Consensus 224 v~~~~g~~~~v~a~lvV~AdG~~S~vR~~l~~~~~~~~~~~~g~--~~~~~~~-p~~~~~~~~~~---~~~~~~~~p~~~ 297 (541)
... +|+..+++||+||+|||.+|.+|+.++............. ....... ..++...++++ ++++.|++|.++
T Consensus 140 ~~~-~~~~~~~~a~~vIgAdG~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 218 (397)
T 3oz2_A 140 IRH-NNEIVDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWVFPKGE 218 (397)
T ss_dssp EEE-TTEEEEEEEEEEEECCCTTCHHHHHHTCGGGCCCGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEEEEEET
T ss_pred ecc-cccceEEEEeEEEeCCccccHHHHHcCCCcccccceeeeeeEEEEeeccccCcccceeeeeccCCCceEEEeeccc
Confidence 643 4555678899999999999999999987543333222221 1111122 23445555554 457799999999
Q ss_pred CceEEEEEecCCCCCCCCCchhHHHHHHHhcCCCCChhhHHHHHhhhhcCCe-eeccCccccCCCCCCCcEEEecccCCC
Q 040732 298 SEVRCLVDVPAGQKLPSIANGEMAKYLKTKVAPQIPDELRDAFISKVEKGSI-RTATNRSMPAAPKTTPGALLLGDAFNM 376 (541)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~vvliGDAah~ 376 (541)
+..++.+...... .....+..+++.+.... . +. +......... ...|.. ....++..+|++++|||||.
T Consensus 219 ~~~~vg~~~~~~~---~~~~~~~~~~l~~~~~~-~-~~----l~~~~~~~~~~~~~~~~-~~~~~~~~~~v~lvGDAA~~ 288 (397)
T 3oz2_A 219 GMANVGIGSSINW---IHNRFELKNYLDRFIEN-H-PG----LKKGQDIQLVTGGVSVS-KVKMPITMPGLMLVGDAARL 288 (397)
T ss_dssp TEEEEEEEEETTT---SCSHHHHHHHHHHHHHT-C-HH----HHTSEEEEEEEEEEECC-CCCSCCEETTEEECGGGGTC
T ss_pred ceeEEEEeeccch---hhhhhhHHHHHHHHHHh-C-cc----ccccceeeeeecccccc-CcccceeeeeEEEccccccc
Confidence 9888777655221 11233444444443211 1 11 1111110111 112222 23346677999999999999
Q ss_pred CCCCCCcchhHHHhhHHHHHHhccccCCCCChHHHHHHHHHHHHHhcChhHHHHHHHHHHHhhhc
Q 040732 377 RHPLTGGGMTVALSDVVVLRNLIKPLQDFHDAASLNQYLESFYTLRKPVASTINTLANSAYQVFS 441 (541)
Q Consensus 377 ~~P~~GqG~~~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~~~~~~i~~ls~~l~~~~~ 441 (541)
++|++|||+|+||+|+..||+.|.+....++. .+++|+.|++.++++............+.+.
T Consensus 289 ~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~~~~--~~~~L~~Ye~~~~~~~~~~~~~~~~~~~~~~ 351 (397)
T 3oz2_A 289 IDPITGGGIANAIVSGMYAAQVTKEAIESNDY--SPQMMQKYEKLIKERFERKHLRNWVAKEKLA 351 (397)
T ss_dssp SCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCC--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHcCCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999875322222 2578999999888766544333333333333
No 16
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=100.00 E-value=1.5e-35 Score=305.43 Aligned_cols=323 Identities=20% Similarity=0.162 Sum_probs=221.7
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhh
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDC 144 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~ 144 (541)
..+||+||||||+|+++|+.|+++|++|+|+||.+.... ...+..+.+++.+.|+++|+.+.
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~------------------~~~~~~l~~~~~~~l~~~g~~~~ 71 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRA------------------FGAGIYLWHNGLRVLEGLGALDD 71 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCC------------------CSSEEEEEHHHHHHHHHTTCHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCC------------------CCceEEeCccHHHHHHHcCCHHH
Confidence 468999999999999999999999999999999875544 45567789999999999999988
Q ss_pred HhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEE
Q 040732 145 VEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVH 223 (541)
Q Consensus 145 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~ 223 (541)
+... ..+..++.++..|.. ...++.. ....+.++|.++.+.|.+.+.+. +++++.++ |+++.. ++ .
T Consensus 72 ~~~~-~~~~~~~~~~~~g~~-~~~~~~~----~~~~~~~~r~~l~~~L~~~~~~~-gv~i~~~~~v~~i~~-~~-----~ 138 (379)
T 3alj_A 72 VLQG-SHTPPTYETWMHNKS-VSKETFN----GLPWRIMTRSHLHDALVNRARAL-GVDISVNSEAVAADP-VG-----R 138 (379)
T ss_dssp HHTT-CBCCSCEEEEETTEE-EEEECGG----GCCEEEEEHHHHHHHHHHHHHHT-TCEEESSCCEEEEET-TT-----E
T ss_pred HHhh-CCCccceEEEeCCce-eeeccCC----CCceEEECHHHHHHHHHHHHHhc-CCEEEeCCEEEEEEe-CC-----E
Confidence 7754 334455555555332 1122211 12357899999999999999886 89999997 998877 43 2
Q ss_pred EEcCCCcEEEEEcCEEEEecCCCCcccccccCCCcccccceEEEEEe-ec-----CCCCCC-eeEE--EEcCCCcEEEEE
Q 040732 224 YKTKDGQEHKSYAPLTIVCDGGFSNLRRSLCNPKVDIPSCFVGMALE-NC-----QLPVPN-HGHV--VLTDPSPILFYP 294 (541)
Q Consensus 224 v~~~~g~~~~v~a~lvV~AdG~~S~vR~~l~~~~~~~~~~~~g~~~~-~~-----~~p~~~-~~~~--~~~~~~~~~~~p 294 (541)
+++++|++ ++||+||+|||.+|.+|+.++.........+..+... .. ....+. .... +++++++++++|
T Consensus 139 v~~~~g~~--~~ad~vV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 216 (379)
T 3alj_A 139 LTLQTGEV--LEADLIVGADGVGSKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSP 216 (379)
T ss_dssp EEETTSCE--EECSEEEECCCTTCHHHHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECCSSSCCEEEEEE
T ss_pred EEECCCCE--EEcCEEEECCCccHHHHHHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceEECCCCEEEEEE
Confidence 34567764 5699999999999999999876322111112222111 11 122122 2222 567788999999
Q ss_pred ccCCceEEEEEecCCCCCCCCCchhHHHHHHHhcCCCCChhhHHHHHhhhhcCCeeeccCcc-ccCCCCCCCcEEEeccc
Q 040732 295 ISSSEVRCLVDVPAGQKLPSIANGEMAKYLKTKVAPQIPDELRDAFISKVEKGSIRTATNRS-MPAAPKTTPGALLLGDA 373 (541)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~vvliGDA 373 (541)
++++..++++..+. .. +. .+++.+.+..+.. .++ .+.+.+.. .+...+..++... .+..+|..+|++|+|||
T Consensus 217 ~~~~~~~~~~~~~~-~~-~~--~~~l~~~~~~~~~-~~~-~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDA 289 (379)
T 3alj_A 217 CNENELYLGLMAPA-AD-PR--GSSVPIDLEVWVE-MFP-FLEPCLIE-AAKLKTARYDKYETTKLDSWTRGKVALVGDA 289 (379)
T ss_dssp CSSSEEEEEEEECT-TC-TT--TTCSSCCHHHHHH-HCG-GGHHHHHH-HHTCTTCCEEEEEEEEESCSEETTEEECTHH
T ss_pred CCCCcEEEEEEecC-CC-CC--HHHHHHHHhcCCc-hhc-cHHHHHhh-CCccceEEecccccCCCCCcccCcEEEEEcc
Confidence 99998888777652 11 11 1222222222110 011 11122221 1122333344333 23568888999999999
Q ss_pred CCCCCCCCCcchhHHHhhHHHHHHhccccCCCCChHHHHHHHHHHHHHhcChhHHHHHHH
Q 040732 374 FNMRHPLTGGGMTVALSDVVVLRNLIKPLQDFHDAASLNQYLESFYTLRKPVASTINTLA 433 (541)
Q Consensus 374 ah~~~P~~GqG~~~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~~~~~~i~~ls 433 (541)
||.++|++|||+|+||+||..|+++|... .++..+|+.|+++|++++..++..+
T Consensus 290 Ah~~~P~~GqG~~~ai~da~~La~~L~~~------~~~~~~l~~Y~~~r~~~~~~~~~~s 343 (379)
T 3alj_A 290 AHAMCPALAQGAGCAMVNAFSLSQDLEEG------SSVEDALVAWETRIRPITDRCQALS 343 (379)
T ss_dssp HHCCCGGGSCHHHHHHHHHHHHHHHTTSS------SCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcchhhhHHHHHHHHHHHHHHhccc------cCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999763 1346799999999999999988776
No 17
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=100.00 E-value=2e-35 Score=311.67 Aligned_cols=404 Identities=17% Similarity=0.163 Sum_probs=254.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchh
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDD 143 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~ 143 (541)
+.++||+||||||+|+++|+.|+++|++|+|+||.+....+ . ..+|..+ +.+.++++|+.+
T Consensus 4 ~~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g--~--------------~~~g~~l---~~~~l~~lg~~~ 64 (453)
T 3atr_A 4 ELKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIG--D--------------KPCGDAV---SKAHFDKLGMPY 64 (453)
T ss_dssp EEECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTT--C--------------SCCCCEE---EHHHHHHTTCCC
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCC--c--------------ccccccc---cHHHHHHhcCCC
Confidence 34689999999999999999999999999999998642110 0 2233333 567788888765
Q ss_pred hHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEE
Q 040732 144 CVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGV 222 (541)
Q Consensus 144 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV 222 (541)
...........++.++.........+ ...++.++|..|.+.|.+.+.+. +++++.++ |+++..+++.+.+|
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~i~r~~l~~~L~~~a~~~-gv~i~~~~~v~~i~~~~~~v~gv 136 (453)
T 3atr_A 65 PKGEELENKINGIKLYSPDMQTVWTV-------NGEGFELNAPLYNQRVLKEAQDR-GVEIWDLTTAMKPIFEDGYVKGA 136 (453)
T ss_dssp CCGGGEEEEEEEEEEECTTSSCEEEE-------EEEEEEECHHHHHHHHHHHHHHT-TCEEESSEEEEEEEEETTEEEEE
T ss_pred CchHHHHhhhcceEEECCCCceEEeE-------CCCcEEEcHHHHHHHHHHHHHHc-CCEEEeCcEEEEEEEECCEEEEE
Confidence 43221122344544443222111111 12367899999999999999885 89999997 99999888888888
Q ss_pred EEEcC-CCcEEEEEcCEEEEecCCCCcccccccCCCcc----cc-cceEEEEE--e-ecCCCCCCeeEEEEc----CCCc
Q 040732 223 HYKTK-DGQEHKSYAPLTIVCDGGFSNLRRSLCNPKVD----IP-SCFVGMAL--E-NCQLPVPNHGHVVLT----DPSP 289 (541)
Q Consensus 223 ~v~~~-~g~~~~v~a~lvV~AdG~~S~vR~~l~~~~~~----~~-~~~~g~~~--~-~~~~p~~~~~~~~~~----~~~~ 289 (541)
++.+. +|+..+++||+||+|||.+|.+|+.++.+.+. .+ ....++.. . .....++....++++ ++++
T Consensus 137 ~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 216 (453)
T 3atr_A 137 VLFNRRTNEELTVYSKVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGY 216 (453)
T ss_dssp EEEETTTTEEEEEECSEEEECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTSTTSC
T ss_pred EEEEcCCCceEEEEcCEEEECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCCCCcE
Confidence 88765 77766688999999999999999998764321 11 11222221 1 112223344455654 5688
Q ss_pred EEEEEccCCceEEEEEecCCCCCCCCCchhHHHHHHHhcCCCCChhhHHHHHhhhhcCCeeeccCccccCCCCCCCcEEE
Q 040732 290 ILFYPISSSEVRCLVDVPAGQKLPSIANGEMAKYLKTKVAPQIPDELRDAFISKVEKGSIRTATNRSMPAAPKTTPGALL 369 (541)
Q Consensus 290 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvl 369 (541)
+|++|.+++.+++.+.++... .+....+...+++.+. .+.+... +.+.. .-...|. ..+..+|..+|+++
T Consensus 217 ~~~~P~~~~~~~vg~~~~~~~-~~~~~~~~~~~~l~~~-~~~~~~~------~~~~~-~~~~~p~-~~~~~~~~~~~v~l 286 (453)
T 3atr_A 217 WWYFPKGKNKVNVGLGIQGGM-GYPSIHEYYKKYLDKY-APDVDKS------KLLVK-GGALVPT-RRPLYTMAWNGIIV 286 (453)
T ss_dssp EEEEEEETTEEEEEEEEESSS-CCCCHHHHHHHHHHHH-CTTEEEE------EEEEE-EEEEEEC-SSCCSCSEETTEEE
T ss_pred EEEEECCCCeEEEEEEecCCC-CCCCHHHHHHHHHHhh-hhhcCCC------eEEec-cceeccC-CCCCCceecCCEEE
Confidence 999999999888877766221 1111122333333321 1211110 00100 0012232 34556788899999
Q ss_pred ecccCCCCCCCCCcchhHHHhhHHHHHHhccccCCCCChHHHHHHHHHHHHHhcChhHHHHHHHHHHHhhhcCCChHHHH
Q 040732 370 LGDAFNMRHPLTGGGMTVALSDVVVLRNLIKPLQDFHDAASLNQYLESFYTLRKPVASTINTLANSAYQVFSASSDEARE 449 (541)
Q Consensus 370 iGDAah~~~P~~GqG~~~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~~~~~~i~~ls~~l~~~~~~~~~~~~~ 449 (541)
+|||||.++|++|||+|+|++||..|+++|......++. ..++|+.|+++|+++....+..++.+.+++..-.++...
T Consensus 287 vGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~~~~~--~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (453)
T 3atr_A 287 IGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETGDF--SASGLWDMNICYVNEYGAKQASLDIFRRFLQKLSNDDIN 364 (453)
T ss_dssp CGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCC--STTTTTHHHHHHHHHTHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred EeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHHcCCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHH
Confidence 999999999999999999999999999999764211111 145899999999999999998888888776543344322
Q ss_pred -HHH------HHHHHHhhcCCCChHhH----HHhhcc-CCCCchhHHHHHHHHHHHHHHHhccCCC-ChHHH
Q 040732 450 -VMR------QASVDYLGLGGIYTSGA----MALLSG-LNPSPSSLIFHFLAMAIFGVGRLLLPFP-SPKRL 508 (541)
Q Consensus 450 -~lr------~~~~~~~~~~~~~~~~~----~~ll~g-~~~~p~~l~~~~~~~~~~~~~~~~~~~~-~~~~~ 508 (541)
.++ ..+.+++..+ .+.... ..++.. .+|+...-+...+.. .+.+..+...+| +|..+
T Consensus 365 ~~~~~~~l~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~-~~~~~~~~~~~p~~~~~~ 434 (453)
T 3atr_A 365 YGMKKKIIKEEDLLEASEKG-DLHLSVADKAMRVISGLGRPSLLFKLKAVAES-MKKIKELYLNYPRSPSSL 434 (453)
T ss_dssp HHHHTTSSCHHHHHHHHHHC-CCCHHHHHHHHHHHTTCCSCCGGGGHHHHHHH-HHHHHHHHHTCCSSGGGH
T ss_pred HHHHHcCCChHHHHHHhhcC-CccccHHHHHHHHHHhcCChHHHHHHHHHHHH-HHHHHHHHHHCCCChHHH
Confidence 222 1122222443 332222 223332 356655555555555 567777666777 55533
No 18
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=100.00 E-value=2.7e-35 Score=305.44 Aligned_cols=338 Identities=15% Similarity=0.206 Sum_probs=221.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccC-chhhHHHHHCCch
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQ-PGGYLKLVELGLD 142 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~-~~~~~~l~~lgl~ 142 (541)
+.++||+||||||+|+++|+.|+++|++|+|+||.+.......|. +..+. ..+.+.|+++|++
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~----------------~~~~~~~~~~~~l~~~gl~ 87 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGG----------------TLDLHKGSGQEAMKKAGLL 87 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSC----------------CEECCTTTHHHHHHHTTCH
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCC----------------eeeeCCccHHHHHHhcChH
Confidence 456899999999999999999999999999999987543311111 11233 3568899999999
Q ss_pred hhHhhccceeeeeeEEEEC-CeeeeecC--CCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCe
Q 040732 143 DCVEEIDAHPVVGYALFKD-GKITKTPY--PLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGI 218 (541)
Q Consensus 143 ~~~~~~~~~~~~g~~~~~~-g~~~~~~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~ 218 (541)
+.+..... +... .++.. |... ... +.. .......++|..|.+.|.+.+. +++++.++ |+++..+++.
T Consensus 88 ~~~~~~~~-~~~~-~~~~~~g~~~-~~~~~~~~---~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~i~~~~~~ 158 (398)
T 2xdo_A 88 QTYYDLAL-PMGV-NIADEKGNIL-STKNVKPE---NRFDNPEINRNDLRAILLNSLE---NDTVIWDRKLVMLEPGKKK 158 (398)
T ss_dssp HHHHHHCB-CCCE-EEECSSSEEE-EECCCGGG---TTSSCCEECHHHHHHHHHHTSC---TTSEEESCCEEEEEECSSS
T ss_pred HHHHHhhc-ccce-EEECCCCCch-hhcccccc---CCCCCceECHHHHHHHHHhhcC---CCEEEECCEEEEEEECCCE
Confidence 88875432 2222 33332 3221 111 110 0112235899999999988764 35667776 9999877653
Q ss_pred EEEEEEEcCCCcEEEEEcCEEEEecCCCCcccccccCCCcccccceEEEEEeecCCC-----C-------CCeeEEEEcC
Q 040732 219 VKGVHYKTKDGQEHKSYAPLTIVCDGGFSNLRRSLCNPKVDIPSCFVGMALENCQLP-----V-------PNHGHVVLTD 286 (541)
Q Consensus 219 v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~vR~~l~~~~~~~~~~~~g~~~~~~~~p-----~-------~~~~~~~~~~ 286 (541)
|++++++|++ ++||+||+|||.+|.+|+.++...+ .+.+.......++ . +.....++++
T Consensus 159 ---v~v~~~~g~~--~~ad~vV~AdG~~S~vR~~l~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 229 (398)
T 2xdo_A 159 ---WTLTFENKPS--ETADLVILANGGMSKVRKFVTDTEV----EETGTFNIQADIHQPEINCPGFFQLCNGNRLMASHQ 229 (398)
T ss_dssp ---EEEEETTSCC--EEESEEEECSCTTCSCCTTTCCCCC----EEEEEEEEEEEESSHHHHSHHHHHHHTTSEEEEEET
T ss_pred ---EEEEECCCcE--EecCEEEECCCcchhHHhhccCCCc----eEcceEEEEEEeCchhccCchhHhhcCCceEEEecC
Confidence 5566678875 5599999999999999999864222 2222222111111 0 1122344566
Q ss_pred CCcEEEEEccCCceEEEEEecCCCCC------CCCCchhHHHHHHHhcCCCCChhhHHHHHhhhhcCCeeeccCccccC-
Q 040732 287 PSPILFYPISSSEVRCLVDVPAGQKL------PSIANGEMAKYLKTKVAPQIPDELRDAFISKVEKGSIRTATNRSMPA- 359 (541)
Q Consensus 287 ~~~~~~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~- 359 (541)
+..++++|.+++.+++++.+...+.. ...+.++..+.+.+.+. .+.+.+.+.+.. ...+..++....+.
T Consensus 230 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 305 (398)
T 2xdo_A 230 GNLLFANPNNNGALHFGISFKTPDEWKNQTQVDFQNRNSVVDFLLKEFS-DWDERYKELIHT---TLSFVGLATRIFPLE 305 (398)
T ss_dssp TEEEEEEEEETTEEEEEEEEECCTTC---CCSCTTCHHHHHHHHHHHTT-TSCHHHHHHHHH---CSCCEEEEEEECCCC
T ss_pred CCeEEEEeCCCCcEEEEEEEecCcccccccccCcCCHHHHHHHHHHHHc-CCChHHHHHHhC---cccceeeeeEeccCC
Confidence 66778889999888877765422211 11233455566665443 355556555433 12333333333332
Q ss_pred CCCCC-C--cEEEecccCCCCCCCCCcchhHHHhhHHHHHHhccccCCCCChHHHHHHHHHHHHHhcChhHHHHHHHHHH
Q 040732 360 APKTT-P--GALLLGDAFNMRHPLTGGGMTVALSDVVVLRNLIKPLQDFHDAASLNQYLESFYTLRKPVASTINTLANSA 436 (541)
Q Consensus 360 ~~~~~-~--~vvliGDAah~~~P~~GqG~~~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~~~~~~i~~ls~~l 436 (541)
.+|.. + ||+|+|||||.++|++|||+|+||+||.+|+++|.... .+ ....+|+.|+++|++++..++..+...
T Consensus 306 ~~~~~~~~~rv~LiGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~~--~~--~~~~~L~~Y~~~r~~~~~~~~~~s~~~ 381 (398)
T 2xdo_A 306 KPWKSKRPLPITMIGDAAHLMPPFAGQGVNSGLVDALILSDNLADGK--FN--SIEEAVKNYEQQMFIYGKEAQEESTQN 381 (398)
T ss_dssp SCCCSCCSSCEEECTHHHHCCCCTTSCSHHHHHHHHHHHHHHHHSCC--SS--SHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccCCCccEEEEeehhccCCCccCccHHHHHHHHHHHHHHHHhcc--Cc--hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36654 5 89999999999999999999999999999999997641 11 157899999999999999998888776
Q ss_pred Hh-hhcCC
Q 040732 437 YQ-VFSAS 443 (541)
Q Consensus 437 ~~-~~~~~ 443 (541)
.. +|..+
T Consensus 382 ~~~~~~~~ 389 (398)
T 2xdo_A 382 EIEMFKPD 389 (398)
T ss_dssp HHHHHSTT
T ss_pred HHHHhCCC
Confidence 64 45433
No 19
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=100.00 E-value=8.4e-36 Score=322.12 Aligned_cols=360 Identities=16% Similarity=0.142 Sum_probs=243.5
Q ss_pred CCCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCch
Q 040732 63 SVAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLD 142 (541)
Q Consensus 63 ~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~ 142 (541)
++..+||+|||||++|+++|+.|+++|++|+|||+.+.+ . ..+|+.+.+.+...++.+|++
T Consensus 20 ~M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~-~------------------~~~G~~l~p~~~~~l~~lGl~ 80 (591)
T 3i3l_A 20 HMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFP-R------------------YRVGESLLPGTMSILNRLGLQ 80 (591)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS-C------------------CCCCCBCCHHHHHHHHHTTCH
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCC-C------------------CceeeeECHHHHHHHHHcCCc
Confidence 456799999999999999999999999999999998633 2 345778999999999999999
Q ss_pred hhHhhccceeeeeeEEEECCee--eeecCCCCCC--CCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCC
Q 040732 143 DCVEEIDAHPVVGYALFKDGKI--TKTPYPLGNF--QANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENG 217 (541)
Q Consensus 143 ~~~~~~~~~~~~g~~~~~~g~~--~~~~~~~~~~--~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~ 217 (541)
+.+.........+......... ....+..... .....++.+++..|.+.|.+.+.+. |+++++++ |+++..+++
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~-Gv~i~~g~~V~~v~~~~g 159 (591)
T 3i3l_A 81 EKIDAQNYVKKPSATFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSR-GITVHEETPVTDVDLSDP 159 (591)
T ss_dssp HHHHHHCCEEECEEEEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHT-TCEEETTCCEEEEECCST
T ss_pred HHHHhcCCcccCCcEEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEcCC
Confidence 8887655444444433332111 1122221111 0223467899999999999999885 89999996 999987666
Q ss_pred eEEEEEEEcCCCcEEEEEcCEEEEecCCCCcccccccCCCcccccceEEEEE--e-ecCC--CCCCeeEEEEcCCCcEEE
Q 040732 218 IVKGVHYKTKDGQEHKSYAPLTIVCDGGFSNLRRSLCNPKVDIPSCFVGMAL--E-NCQL--PVPNHGHVVLTDPSPILF 292 (541)
Q Consensus 218 ~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~vR~~l~~~~~~~~~~~~g~~~--~-~~~~--p~~~~~~~~~~~~~~~~~ 292 (541)
.+.+|++.. +|+..+++||+||+|||.+|.+|+.++.+.........++.. . .... +........+.+++++|+
T Consensus 160 ~~~~V~~~~-~G~~~~i~AdlVV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~~~~~G~~w~ 238 (591)
T 3i3l_A 160 DRVVLTVRR-GGESVTVESDFVIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGTTYSITFEDGWVWM 238 (591)
T ss_dssp TCEEEEEEE-TTEEEEEEESEEEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTTCEEEEEETTEEEEE
T ss_pred CEEEEEEec-CCceEEEEcCEEEECCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCCceEEEEcCCcEEEE
Confidence 555666543 675556889999999999999999987643322222222221 1 1122 223344556668899999
Q ss_pred EEccCCceEEEEEecCCCCCCCCCchhHHHHHHHhcCCCCChhhHHHHHhhhhcCCeeeccCccccCCCCCCCcEEEecc
Q 040732 293 YPISSSEVRCLVDVPAGQKLPSIANGEMAKYLKTKVAPQIPDELRDAFISKVEKGSIRTATNRSMPAAPKTTPGALLLGD 372 (541)
Q Consensus 293 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvliGD 372 (541)
+|.+++.+++.+..+ .+...........+++.+... . .+.+.+.+...........++.......+|..+|+++|||
T Consensus 239 iPl~~~~~sv~~~~~-~~~~~~l~~~~~~~~~~~l~~-~-~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvvLIGD 315 (591)
T 3i3l_A 239 IPIKDDLYSVGLVVD-RSKSAEVREQGADAFYSSTLA-K-CAKAMDILGGAEQVDEVRIVQDWSYDTEVFSADRFFLCGD 315 (591)
T ss_dssp EECSSSEEEEEEEEE-GGGHHHHHHHCHHHHHHHHHT-T-CHHHHHHHTTCEECSCCEEEEEEEEEESCSEETTEEECGG
T ss_pred EECCCCeEEEEEEcC-HHHHhhhccCCHHHHHHHHHH-h-CHHHHHHHhcCccccCceEecccccchhhcccCCEEEEcc
Confidence 999998877777665 221111111112233333221 1 2333333322211122333333333456788899999999
Q ss_pred cCCCCCCCCCcchhHHHhhHHHHHHhccccCCCCChHHHHHHHHHHHHHhcChhHHHHHHHHHHH--hhhcCCChHHH
Q 040732 373 AFNMRHPLTGGGMTVALSDVVVLRNLIKPLQDFHDAASLNQYLESFYTLRKPVASTINTLANSAY--QVFSASSDEAR 448 (541)
Q Consensus 373 Aah~~~P~~GqG~~~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~~~~~~i~~ls~~l~--~~~~~~~~~~~ 448 (541)
|||.++|+.|||+|+|++||..|+++|..... ..+....+++.|++.|++....+..+...+| ......+.+++
T Consensus 316 AAh~~~Pl~GqGinlAl~dA~~LA~~L~~~l~--~~~~~~~al~~Y~~~~~~~~~~i~~~~~~~Y~~~~~~r~ds~FW 391 (591)
T 3i3l_A 316 AACFTDPLFSQGVHLASQSAVSAAAAIDRITR--HGDEKDAVHAWYNRTYREAYEQYHQFLASFYTFASFTEPDSEFW 391 (591)
T ss_dssp GTCBCCGGGCCHHHHHHHHHHHHHHHHHHHHH--CGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHHH
T ss_pred ccccCCCcccccHHHHHHHHHHHHHHHHHHHh--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCChHHH
Confidence 99999999999999999999999999976421 2334567999999999999999999999999 55554444543
No 20
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=100.00 E-value=8.3e-34 Score=296.35 Aligned_cols=339 Identities=17% Similarity=0.135 Sum_probs=233.8
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhh
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDC 144 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~ 144 (541)
.++||+|||||++|+++|+.|+++|++|+|+||.+.+ . ..+|+.+.+.....++++|+++.
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~-~------------------~~~g~~~~~~~~~~l~~~g~~~~ 64 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFP-R------------------FVIGESLLPRCMEHLDEAGFLDA 64 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSS-C------------------CCSCCBCCGGGHHHHHHTTCHHH
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC-C------------------CcccCcccHhHHHHHHHcCChHH
Confidence 3589999999999999999999999999999998633 2 35577899999999999999998
Q ss_pred HhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEE
Q 040732 145 VEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVH 223 (541)
Q Consensus 145 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~ 223 (541)
+.........+..+...+......+..........++.++|..|.+.|.+.+.+. |+++++++ |+++..+++.+. +.
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~-gv~i~~~~~v~~i~~~~~~~~-v~ 142 (421)
T 3nix_A 65 VKAQGFQQKFGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQ-GVDVEYEVGVTDIKFFGTDSV-TT 142 (421)
T ss_dssp HHHTTCEEECEEEEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHH-TCEEECSEEEEEEEEETTEEE-EE
T ss_pred HHHcCCcccCCcEEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhC-CCEEEcCCEEEEEEEeCCEEE-EE
Confidence 8876655666666655555444554433333344567899999999999999887 89999996 999988766543 66
Q ss_pred EEcCCCcEEEEEcCEEEEecCCCCcccccccCCCcccccceEEEEEe-ecCCCC----CCeeEEEEc---CCCcEEEEEc
Q 040732 224 YKTKDGQEHKSYAPLTIVCDGGFSNLRRSLCNPKVDIPSCFVGMALE-NCQLPV----PNHGHVVLT---DPSPILFYPI 295 (541)
Q Consensus 224 v~~~~g~~~~v~a~lvV~AdG~~S~vR~~l~~~~~~~~~~~~g~~~~-~~~~p~----~~~~~~~~~---~~~~~~~~p~ 295 (541)
+.+.+|+..+++||+||+|||.+|.+|+.++.+.+........+... ....+. ++...+++. +.+++|++|.
T Consensus 143 v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~ 222 (421)
T 3nix_A 143 IEDINGNKREIEARFIIDASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRITAVVHKPKVWIWVIPF 222 (421)
T ss_dssp EEETTSCEEEEEEEEEEECCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC----CCSEEEEEEEETTEEEEEEEC
T ss_pred EEcCCCCEEEEEcCEEEECCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCccCCCCeEEEEEeCCCCEEEEEEEE
Confidence 77788987678899999999999999999887544333333333222 111111 122233332 5678999999
Q ss_pred cCCceEEEEEecCCCCCCCCCchhHHHHHHHhcCCCCChhhHHHHHhhhhcCCeeeccCccccCCCCCCCcEEEecccCC
Q 040732 296 SSSEVRCLVDVPAGQKLPSIANGEMAKYLKTKVAPQIPDELRDAFISKVEKGSIRTATNRSMPAAPKTTPGALLLGDAFN 375 (541)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvliGDAah 375 (541)
+++...+.+..+ .+..... .....+.+.+... .. +.+.+.+........+..++.......++..+|++++|||||
T Consensus 223 ~~~~~~vg~~~~-~~~~~~~-~~~~~~~l~~~~~-~~-p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAa~ 298 (421)
T 3nix_A 223 SNGNTSVGFVGE-PSYFDEY-TGTPEERMRAMIA-NE-GHIAERFKSEEFLFEPRTIEGYAISASKLYGDGFVLTGNATE 298 (421)
T ss_dssp TTSEEEEEEEEC-HHHHTTS-CSCHHHHHHHHHH-TC-TTTHHHHTTCCBSSCCEEEECCCBEESCSEETTEEECGGGTC
T ss_pred CCCCEEEEEEec-HHHhhhc-CCCHHHHHHHHHH-hC-cHHHHHHhcCccccCceeecccceeeeeeccCCEEEeccccc
Confidence 999888877665 2111111 1122233333221 11 233333332222234455555555566788899999999999
Q ss_pred CCCCCCCcchhHHHhhHHHHHHhccccCCCCChHHHHHHHHHHHHHhcChhHHHHHH
Q 040732 376 MRHPLTGGGMTVALSDVVVLRNLIKPLQDFHDAASLNQYLESFYTLRKPVASTINTL 432 (541)
Q Consensus 376 ~~~P~~GqG~~~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~~~~~~i~~l 432 (541)
.++|++|||++.|++||..|++.|.......+. ..++.|.+.++.........
T Consensus 299 ~~~P~~G~G~~~A~~~a~~la~~l~~~~~~~~~----~~~~~y~~~~~~~~~~~~~~ 351 (421)
T 3nix_A 299 FLDPIFSSGATFAMESGSKGGKLAVQFLKGEEV----NWEKDFVEHMMQGIDTFRSF 351 (421)
T ss_dssp BCCSTTCCHHHHHHHHHHHHHHHHHHHHTTCCC----CHHHHTHHHHHHHHHHHHHH
T ss_pred ccCCcccccHHHHHHHHHHHHHHHHHHhcCCch----hHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999774322221 25667777776655544433
No 21
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=100.00 E-value=1.1e-33 Score=292.83 Aligned_cols=356 Identities=19% Similarity=0.191 Sum_probs=233.4
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhh
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDC 144 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~ 144 (541)
.++||+|||||++|+++|+.|+++|++|+|+||.+..... ..++..+. .+.++++|+++.
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~-----------------~~~~~~~~---~~~~~~lg~~~~ 62 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSP-----------------VRCGEGLS---KGILNEADIKAD 62 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCS-----------------CCSCCEEE---THHHHHTTCCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC-----------------cccccccC---HHHHHHcCCCCC
Confidence 3589999999999999999999999999999998743220 12222232 356788888654
Q ss_pred HhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEE
Q 040732 145 VEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVH 223 (541)
Q Consensus 145 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~ 223 (541)
... ......++.++.........++.... ....++.++|..|.+.|.+.+.+. |++++.++ |+++..+++.+.+|+
T Consensus 63 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~-gv~i~~~~~v~~i~~~~~~v~gv~ 139 (397)
T 3cgv_A 63 RSF-IANEVKGARIYGPSEKRPIILQSEKA-GNEVGYVLERDKFDKHLAALAAKA-GADVWVKSPALGVIKENGKVAGAK 139 (397)
T ss_dssp TTT-EEEEESEEEEECTTCSSCEEEC------CCCEEEECHHHHHHHHHHHHHHH-TCEEESSCCEEEEEEETTEEEEEE
T ss_pred hHH-hhhhcceEEEEcCCCCEEEEEecccc-CCceeEEEeHHHHHHHHHHHHHhC-CCEEEECCEEEEEEEeCCEEEEEE
Confidence 222 23344556555433221122221111 133578899999999999999886 89999986 999998888887788
Q ss_pred EEcCCCcEEEEEcCEEEEecCCCCcccccccCCC-cccccc-eEEEEE--eecCCCCCCeeEEEE---cCCCcEEEEEcc
Q 040732 224 YKTKDGQEHKSYAPLTIVCDGGFSNLRRSLCNPK-VDIPSC-FVGMAL--ENCQLPVPNHGHVVL---TDPSPILFYPIS 296 (541)
Q Consensus 224 v~~~~g~~~~v~a~lvV~AdG~~S~vR~~l~~~~-~~~~~~-~~g~~~--~~~~~p~~~~~~~~~---~~~~~~~~~p~~ 296 (541)
+... ++..+++||+||+|||.+|.+|+.++.+. ...... ..++.. .....+ ++...+++ .+.+++|++|.+
T Consensus 140 ~~~~-~~~~~~~a~~vV~A~G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~P~~ 217 (397)
T 3cgv_A 140 IRHN-NEIVDVRAKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVD-PDYTDFYLGSIAPAGYIWVFPKG 217 (397)
T ss_dssp EEET-TEEEEEEEEEEEECCCTTCHHHHHHTCCTTCCCGGGEEEEEEEEEESCCCC-TTEEEEECSTTSTTEEEEEEEEE
T ss_pred EEEC-CeEEEEEcCEEEECCCcchHhHHhcCCCccCCChhheeEEEEEEeccCCCC-CCcEEEEeCCcCCCceEEEEECC
Confidence 7543 33345779999999999999999998755 322222 222222 222332 44555555 356889999999
Q ss_pred CCceEEEEEecCCCCCCCCCchhHHHHHHHhcCCCCChhhHHHHHhhhhcCCeeeccCccccCCCCCCCcEEEecccCCC
Q 040732 297 SSEVRCLVDVPAGQKLPSIANGEMAKYLKTKVAPQIPDELRDAFISKVEKGSIRTATNRSMPAAPKTTPGALLLGDAFNM 376 (541)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvliGDAah~ 376 (541)
++..++.+...... . ....+..+.+.++.... +.+. ...+.......+|.. .+..+|..+|++++|||||.
T Consensus 218 ~~~~~vg~~~~~~~-~--~~~~~~~~~l~~~~~~~--~~~~---~~~~~~~~~~~~p~~-~~~~~~~~~~v~liGDAa~~ 288 (397)
T 3cgv_A 218 EGMANVGIGSSINW-I--HNRFELKNYLDRFIENH--PGLK---KGQDIQLVTGGVSVS-KVKMPITMPGLMLVGDAARL 288 (397)
T ss_dssp TTEEEEEEEEETTT-C--SCHHHHHHHHHHHHHTC--HHHH---TSEEEEEEEEEEECC-CCCSCCEETTEEECGGGGTC
T ss_pred CCeEEEEEEecccc-c--cCCCCHHHHHHHHHHhC--cCCC---CCeEEeeeeeeeecC-CCccceeeCCEEEEEccccC
Confidence 99888877766222 1 12234444444432211 1111 000111122344443 23567788999999999999
Q ss_pred CCCCCCcchhHHHhhHHHHHHhccccCCCCChHHHHHHHHHHHHHhcChhHHHHHHHHHHHhhhcCCChHHHHHHHHHHH
Q 040732 377 RHPLTGGGMTVALSDVVVLRNLIKPLQDFHDAASLNQYLESFYTLRKPVASTINTLANSAYQVFSASSDEAREVMRQASV 456 (541)
Q Consensus 377 ~~P~~GqG~~~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~~~~~~i~~ls~~l~~~~~~~~~~~~~~lr~~~~ 456 (541)
++|++|||+|+|++|+..|++.|.+....++ ....+|+.|+++|+++.......+..+.+++...++.. .+.++
T Consensus 289 ~~P~~G~G~~~a~~~a~~la~~l~~~~~~~~--~~~~~l~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 362 (397)
T 3cgv_A 289 IDPITGGGIANAIVSGMYAAQVTKEAIESND--YSPQMMQKYEKLIKERFERKHLRNWVAKEKLAMLSDDT----LDKLV 362 (397)
T ss_dssp SCTTTCCCHHHHHHHHHHHHHHHHHHHHHTC--CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHH----HHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHcCC--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH----HHHHH
Confidence 9999999999999999999999976421111 12568999999999988888888888888776544332 34445
Q ss_pred HHhh
Q 040732 457 DYLG 460 (541)
Q Consensus 457 ~~~~ 460 (541)
+++.
T Consensus 363 ~~~~ 366 (397)
T 3cgv_A 363 DIVS 366 (397)
T ss_dssp HHHT
T ss_pred HhcC
Confidence 4443
No 22
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=100.00 E-value=5.7e-31 Score=282.56 Aligned_cols=341 Identities=18% Similarity=0.162 Sum_probs=223.4
Q ss_pred CCCcEEEECCChHHHHHHHHHhh------------CCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchh
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGT------------DGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGG 132 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~------------~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~ 132 (541)
..+||||||||++|+++|+.|++ .|++|+|||+... +. ..+|+.+.|++
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~-~~------------------~g~g~~~~p~~ 66 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV-AT------------------IGVGEGTWPSM 66 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC-CC------------------CCSCEECCTHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC-CC------------------cceeeechHhH
Confidence 45899999999999999999999 9999999999753 33 34588899999
Q ss_pred hHHHHHCCchhh--HhhccceeeeeeEEEE--C------CeeeeecCC---------C----------------------
Q 040732 133 YLKLVELGLDDC--VEEIDAHPVVGYALFK--D------GKITKTPYP---------L---------------------- 171 (541)
Q Consensus 133 ~~~l~~lgl~~~--~~~~~~~~~~g~~~~~--~------g~~~~~~~~---------~---------------------- 171 (541)
...|+.+|+.+. +.........++.+.. . +.....++. .
T Consensus 67 ~~~l~~lGi~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~ 146 (526)
T 2pyx_A 67 RSTLSKIGIDENDFIRQCDASFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQV 146 (526)
T ss_dssp HHHHHHHTCCHHHHHHHTTCEEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHH
T ss_pred HHHHHHcCCCHHHHHHHcCCEEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccc
Confidence 999999999886 5554333333433321 0 000000000 0
Q ss_pred -------------CCC-CCCccceeecchHHHHHHHHHHHcCCCeEEEeCeEEEeeeeC-CeEEEEEEEcCCCcEEEEEc
Q 040732 172 -------------GNF-QANVAGRSFHNGRFIQRMREKAASLPNVRMEEGTVTSLFEEN-GIVKGVHYKTKDGQEHKSYA 236 (541)
Q Consensus 172 -------------~~~-~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~v~~l~~~~-~~v~gV~v~~~~g~~~~v~a 236 (541)
..+ .....++.++|..|.+.|++.+.+..|++++.++|+++..++ +.+.+| .+++|++ ++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~~v~~i~~~~~g~~~~v--~~~~g~~--i~a 222 (526)
T 2pyx_A 147 LTQLGLAPKSIVTAQYHFQNNYGYHLNAAKFSQLLTEHCTQKLGVTHIRDHVSQIINNQHGDIEKL--ITKQNGE--ISG 222 (526)
T ss_dssp HHHTTBCSSCTTSCTTCCSSCCEEEECHHHHHHHHHHHHHHTSCCEEEECCEEEEEECTTSCEEEE--EESSSCE--EEC
T ss_pred hhhhccchhhhhccccCCCCCeeEEEcHHHHHHHHHHHHHhcCCCEEEEeEEEEEEecCCCcEEEE--EECCCCE--EEc
Confidence 000 112245789999999999999988338999999999998754 333334 4566664 669
Q ss_pred CEEEEecCCCCcc-cccccCCCcccc---cceEEEEEe-ecC---CCCCCeeEEEEcCCCcEEEEEccCCceEEEEEecC
Q 040732 237 PLTIVCDGGFSNL-RRSLCNPKVDIP---SCFVGMALE-NCQ---LPVPNHGHVVLTDPSPILFYPISSSEVRCLVDVPA 308 (541)
Q Consensus 237 ~lvV~AdG~~S~v-R~~l~~~~~~~~---~~~~g~~~~-~~~---~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 308 (541)
|+||+|||.+|.+ |+.++.+..... ....++... ... .+..........+.+++|++|.+++....++ +.
T Consensus 223 d~vV~AdG~~S~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~pl~~~~~~~~v-~~- 300 (526)
T 2pyx_A 223 QLFIDCTGAKSLLLGEHLQVPFLSQKSVLFNDRALAIQVPYSDANSPIASCTHSTAQPNGWIWDIGLPTRKGVGYV-YS- 300 (526)
T ss_dssp SEEEECSGGGCCCCCCCTCCCEEECHHHHCCCEEEEEEEECSSTTCCCCSSEEEEEETTEEEEEEECSSEEEEEEE-EC-
T ss_pred CEEEECCCcchHHHHHHhCCCcccccccccCccEEEEEeeccCCCCCCCCceeEEecCCCeEEEeeCCCceEEEEE-ec-
Confidence 9999999999999 667765432211 112233222 111 1112222334456788999999875333222 22
Q ss_pred CCCCCCCCchhHHHHHHHhcCCCCChhhHHHHHhhhhcCCeeeccCccccCCCCCCCcEEEecccCCCCCCCCCcchhHH
Q 040732 309 GQKLPSIANGEMAKYLKTKVAPQIPDELRDAFISKVEKGSIRTATNRSMPAAPKTTPGALLLGDAFNMRHPLTGGGMTVA 388 (541)
Q Consensus 309 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvliGDAah~~~P~~GqG~~~a 388 (541)
.. ..+.++..+.+++.+... .+ .+. ......++.......+|..+|++|+|||||.++|+.|||+|+|
T Consensus 301 ~~---~~~~~~~~~~l~~~l~~~-~~----~l~----~~~~~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~GqGi~~a 368 (526)
T 2pyx_A 301 SS---HTNDIDAQKTLFNYLGVD-GA----AAD----KLEPRQLAINPGYRAKCWQNNCIAIGMAAGFIEPLEASALALI 368 (526)
T ss_dssp TT---TCCHHHHHHHHHHHHTCC-HH----HHH----HCCCEEEECCCEEESCSEETTEEECGGGTEECCCTTCHHHHHH
T ss_pred CC---CCChHHHHHHHHHHHHhc-Cc----ccc----cCCceEEecccCccccccCCCEEEEEhhhcccCccccccHHHH
Confidence 11 122344555555544322 11 111 1223334444334567778999999999999999999999999
Q ss_pred HhhHHHHHHhccccCCCCChHHHHHHHHHHHHHhcChhHHHHHHHHHHHhhhcCCChHH
Q 040732 389 LSDVVVLRNLIKPLQDFHDAASLNQYLESFYTLRKPVASTINTLANSAYQVFSASSDEA 447 (541)
Q Consensus 389 l~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~~~~~~i~~ls~~l~~~~~~~~~~~ 447 (541)
++||..|+++|... ....+.+++.|+++|+++...+.......|.+-...+.+.
T Consensus 369 i~da~~La~~L~~~-----~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~~~r~~~~f 422 (526)
T 2pyx_A 369 EWTASTLAQQLPPN-----RMVMDTISARVNERYQQHWQQIIDFLKLHYVISQRQEDRY 422 (526)
T ss_dssp HHHHHHHHHTCCSC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSSHH
T ss_pred HHHHHHHHHHhhhc-----CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHH
Confidence 99999999999641 3455789999999999999999888877776643333333
No 23
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.98 E-value=2.6e-32 Score=281.32 Aligned_cols=319 Identities=15% Similarity=0.126 Sum_probs=196.1
Q ss_pred CcEEEECCChHHHHHHHHHhhC--CCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCch-h
Q 040732 67 PDVIVVGAGVAGAALAHTLGTD--GRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLD-D 143 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~--G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~-~ 143 (541)
.||+||||||+|+++|+.|+++ |++|+|+||.+.... .+.+..+.+++.+.+...++. +
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~------------------~g~~~~~~~~~~~~~~~~~~~~~ 62 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEV------------------LGWGVVLPGRPGQHPANPLSYLD 62 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCC------------------CCSEEEEESCTTTCTTCGGGGSS
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCc------------------ceeEEEeCcHHHHhhcCcchhhh
Confidence 4899999999999999999999 999999999875533 233334445444411122233 2
Q ss_pred h-HhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEE
Q 040732 144 C-VEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKG 221 (541)
Q Consensus 144 ~-~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~g 221 (541)
. +.. ...+...+.++..|.... .. .....+.++|.+|.+.|.+.+.+. +++++.++ |+++...
T Consensus 63 ~~~~~-~~~~~~~~~~~~~g~~~~--~~-----~~~~~~~~~r~~l~~~L~~~~~~~-gv~i~~~~~v~~i~~~------ 127 (381)
T 3c4a_A 63 APERL-NPQFLEDFKLVHHNEPSL--MS-----TGVLLCGVERRGLVHALRDKCRSQ-GIAIRFESPLLEHGEL------ 127 (381)
T ss_dssp CGGGG-CCEEECCEEEEESSSEEE--CC-----CCSCEEEEEHHHHHHHHHHHHHHT-TCEEETTCCCCSGGGC------
T ss_pred hhHHH-hhccccceEEEeCCeeEE--ec-----CCCceeeecHHHHHHHHHHHHHHC-CCEEEeCCEeccchhc------
Confidence 2 222 122333445555443221 10 012245799999999999999887 89999986 7766431
Q ss_pred EEEEcCCCcEEEEEcCEEEEecCCCCcccccccCCCcccccceEEEEEeecCCCCCCeeEEE--EcCCCcEE--EEEccC
Q 040732 222 VHYKTKDGQEHKSYAPLTIVCDGGFSNLRRSLCNPKVDIPSCFVGMALENCQLPVPNHGHVV--LTDPSPIL--FYPISS 297 (541)
Q Consensus 222 V~v~~~~g~~~~v~a~lvV~AdG~~S~vR~~l~~~~~~~~~~~~g~~~~~~~~p~~~~~~~~--~~~~~~~~--~~p~~~ 297 (541)
+ +++||+||+|||.+|. |+.+..........+.+........+.......+ ..+.++++ +||+++
T Consensus 128 --------~--~~~ad~vV~AdG~~S~-R~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~ 196 (381)
T 3c4a_A 128 --------P--LADYDLVVLANGVNHK-TAHFTEALVPQVDYGRNKYIWYGTSQLFDQMNLVFRTHGKDIFIAHAYKYSD 196 (381)
T ss_dssp --------C--GGGCSEEEECCGGGGG-TCCSSGGGCCCCEEEEEEEEEEEESSCCSSEEEEEEEETTEEEEEEEEECSS
T ss_pred --------c--cccCCEEEECCCCCch-HHhhhhhcCCCcccCCccEEEEecCCCCCcceeeEeeCCCcEEEEEEEEecC
Confidence 0 1359999999999999 9987321000001111121111111111112222 23455543 699998
Q ss_pred CceEEEEEecCC----CCCCCCCchhHHHHHHHhcCCCCChhhHHHHHhhhhcCCeeeccCc-cccCCCCCCCcEEEecc
Q 040732 298 SEVRCLVDVPAG----QKLPSIANGEMAKYLKTKVAPQIPDELRDAFISKVEKGSIRTATNR-SMPAAPKTTPGALLLGD 372 (541)
Q Consensus 298 ~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vvliGD 372 (541)
+...+.+..+.. ...+..+.++..+.+.+.+....+. . +.+.... ..++.. ..+..+|..+|++|+||
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~-----~l~~~~~-~~~~~~~~~~~~~~~~grv~LvGD 269 (381)
T 3c4a_A 197 TMSTFIVECSEETYARARLGEMSEEASAEYVAKVFQAELGG-H-----GLVSQPG-LGWRNFMTLSHDRCHDGKLVLLGD 269 (381)
T ss_dssp SCEEEEEEECHHHHHHTTSSSSCHHHHHHHHHHHTHHHHTT-C-----CCBCCTT-TCSEEEEECCCSCSEETTEEECGG
T ss_pred CeEEEEEECCccccccCCcccCChHHHHHHHHHHhcccCCC-c-----hhhcCCC-cceeeeccccCCCcccCCEEEEEc
Confidence 876544443210 1122233444444444432211000 0 0111111 123322 23467888899999999
Q ss_pred cCCCCCCCCCcchhHHHhhHHHHHHhccccCCCCChHHHHHHHHHHHHHhcChhHHHHHHHHHHHhhhcC
Q 040732 373 AFNMRHPLTGGGMTVALSDVVVLRNLIKPLQDFHDAASLNQYLESFYTLRKPVASTINTLANSAYQVFSA 442 (541)
Q Consensus 373 Aah~~~P~~GqG~~~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~~~~~~i~~ls~~l~~~~~~ 442 (541)
|||.++|++|||+|+||+||..|+++|... .++..+|+.|+++|++++..++..++.+..++..
T Consensus 270 AAh~~~P~~GqG~~~al~Da~~La~~L~~~------~~~~~aL~~Y~~~r~~~~~~~~~~s~~~~~~~~~ 333 (381)
T 3c4a_A 270 ALQSGHFSIGHGTTMAVVVAQLLVKALCTE------DGVPAALKRFEERALPLVQLFRGHADNSRVWFET 333 (381)
T ss_dssp GTCCCCGGGCCHHHHHHHHHHHHHHHHHHS------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccCCCccccHHHHHHHHHHHHHHHhcc------ccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Confidence 999999999999999999999999999763 1357899999999999999999999988865543
No 24
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.97 E-value=2.9e-30 Score=279.55 Aligned_cols=362 Identities=16% Similarity=0.134 Sum_probs=216.5
Q ss_pred CCCcEEEECCChHHHHHHHHHhhC------CCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHH
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTD------GRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVE 138 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~------G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~ 138 (541)
.++|||||||||+|+++|+.|+++ |++|+||||.+..... ...|..+.+++++.|
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~-----------------~~~g~~l~~~~l~~l-- 94 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAH-----------------TLSGACLDPRAFEEL-- 94 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTT-----------------CCCCCEECTHHHHHH--
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCc-----------------cccccccCHHHHHHH--
Confidence 458999999999999999999999 9999999998754331 123445677766654
Q ss_pred CCchhhHhhccceee--eeeEEEECCeeeeecCCC-CC-CCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEee
Q 040732 139 LGLDDCVEEIDAHPV--VGYALFKDGKITKTPYPL-GN-FQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLF 213 (541)
Q Consensus 139 lgl~~~~~~~~~~~~--~g~~~~~~g~~~~~~~~~-~~-~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~ 213 (541)
++-+........... .++.+...... ..++. .. .......+.++|..|.+.|.+.+.+. +++++.++ |+++.
T Consensus 95 l~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~-Gv~i~~g~~v~~l~ 171 (584)
T 2gmh_A 95 FPDWKEKGAPLNTPVTEDRFGILTEKYR--IPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEAL-GVEVYPGYAAAEIL 171 (584)
T ss_dssp CTTHHHHTCCCCEECCEEEEEEECSSCE--EECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHT-TCEEETTCCEEEEE
T ss_pred HHHHHhcCCceeeeechhheeeeccCCC--ccccccCccccccCCCEEEeHHHHHHHHHHHHHHc-CCEEEcCCEEEEEE
Confidence 222211100000011 12222222211 12221 00 01122367899999999999999887 89999997 99998
Q ss_pred eeC-CeEEEEEEEc----CCCcE-------EEEEcCEEEEecCCCCcccccc----cCCCcccccceE--EEE-EeecC-
Q 040732 214 EEN-GIVKGVHYKT----KDGQE-------HKSYAPLTIVCDGGFSNLRRSL----CNPKVDIPSCFV--GMA-LENCQ- 273 (541)
Q Consensus 214 ~~~-~~v~gV~v~~----~~g~~-------~~v~a~lvV~AdG~~S~vR~~l----~~~~~~~~~~~~--g~~-~~~~~- 273 (541)
.++ +.+.+|.+.+ .+|+. .+++||+||+|||.+|.+|+.+ +..... ..... ++. ++...
T Consensus 172 ~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~-~p~~~g~g~~~~~~v~~ 250 (584)
T 2gmh_A 172 FHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANC-EPQTYGIGLKELWVIDE 250 (584)
T ss_dssp ECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTS-CCCCEEEEEEEEEECCG
T ss_pred EcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCC-CchhHHhhhhhheecCc
Confidence 765 5677777642 35542 3577999999999999999887 433211 11122 221 11111
Q ss_pred -CCCCCeeEEEEc------CCCcEEEEEcc--CCceEEEEEecCCCCCCCCCchhHHHHHHHhcCCCCChhhHHHHHhhh
Q 040732 274 -LPVPNHGHVVLT------DPSPILFYPIS--SSEVRCLVDVPAGQKLPSIANGEMAKYLKTKVAPQIPDELRDAFISKV 344 (541)
Q Consensus 274 -~p~~~~~~~~~~------~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~ 344 (541)
...++....+++ ..+..++||.. ++.+++.+........+..+ ..+.++++.. .+.+.+.+.
T Consensus 251 ~~~~~~~~~~~~g~~~~~~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~~~~~---~~~~l~~~~~---~p~i~~~l~--- 321 (584)
T 2gmh_A 251 KKWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNPYLS---PFREFQRWKH---HPSIKPTLE--- 321 (584)
T ss_dssp GGCCTTEEEEEEETTSCTTSCEEEEEEECCSSSCEEEEEEEEETTCCCTTCC---HHHHHHHHTT---STTTHHHHT---
T ss_pred ccccCCeEEEEEeccccCCcCCceEEEEecCCCCeEEEEEEEecCcccccCC---hHHHHHHHHh---ChHHHHHhC---
Confidence 112333333332 12346788988 78888777765322222112 2233343322 123333322
Q ss_pred hcCCee------eccCccccCCCCCCCcEEEecccCCCCCCCCCcchhHHHhhHHHHHHhccccCCCCChHHHHHH---H
Q 040732 345 EKGSIR------TATNRSMPAAPKTTPGALLLGDAFNMRHPLTGGGMTVALSDVVVLRNLIKPLQDFHDAASLNQY---L 415 (541)
Q Consensus 345 ~~~~~~------~~~~~~~~~~~~~~~~vvliGDAah~~~P~~GqG~~~al~Da~~La~~L~~~~~~~~~~~~~~~---l 415 (541)
.++.. .++......++|..+|++|+|||||.++|+.|||+|+||+||.+|+++|......++. ...++ |
T Consensus 322 -~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~~-~~~~a~~~L 399 (584)
T 2gmh_A 322 -GGKRIAYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENL-QSKTIGLHV 399 (584)
T ss_dssp -TCEEEEEEEEEEECCGGGGCCCCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCC-CCSSSSCCC
T ss_pred -CCeEEEecceEccCCCcccCCccccCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCCc-chhhhhhhH
Confidence 12211 1222333456788899999999999999999999999999999999999875321210 01233 8
Q ss_pred HHHHHHhcCh-hHHHHHHHHHHHhhhcCCChHHHHHHHHHHHHHhh
Q 040732 416 ESFYTLRKPV-ASTINTLANSAYQVFSASSDEAREVMRQASVDYLG 460 (541)
Q Consensus 416 ~~Y~~~R~~~-~~~i~~ls~~l~~~~~~~~~~~~~~lr~~~~~~~~ 460 (541)
+.|+++|+++ +......++.+..+|..--......+...+..++.
T Consensus 400 ~~Ye~~r~~~~v~~~l~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~ 445 (584)
T 2gmh_A 400 TEYEDNLKNSWVWKELYSVRNIRPSCHGILGVYGGMIYTGIFYWIF 445 (584)
T ss_dssp THHHHHHHTSHHHHHHHHTTTTTGGGGSTTTHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHhHHHHHHHHHhChhHHHHHhhccHHHHHHHHHHHHHc
Confidence 9999999987 56666677766666643212333344444444444
No 25
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.97 E-value=6.2e-29 Score=266.09 Aligned_cols=340 Identities=16% Similarity=0.082 Sum_probs=215.0
Q ss_pred CCcEEEECCChHHHHHHHHHhh---CCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCch
Q 040732 66 GPDVIVVGAGVAGAALAHTLGT---DGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLD 142 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~---~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~ 142 (541)
.+||||||||++|+++|+.|++ .|++|+|||+... +. ..+|+.+.+.....++.+|+.
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~-~~------------------~~~g~~~~~~~~~~l~~lgi~ 62 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV-RR------------------IGVGEATFSTVRHFFDYLGLD 62 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--------------------------CCEECCTTHHHHHHHHTCC
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC-Cc------------------eeeccccCcchHHHHHHcCCC
Confidence 3699999999999999999999 9999999999752 22 345677888888899999988
Q ss_pred hh--HhhccceeeeeeEEE-----------ECCe-------ee----------eec-------------CC-------CC
Q 040732 143 DC--VEEIDAHPVVGYALF-----------KDGK-------IT----------KTP-------------YP-------LG 172 (541)
Q Consensus 143 ~~--~~~~~~~~~~g~~~~-----------~~g~-------~~----------~~~-------------~~-------~~ 172 (541)
+. +.........+..+. ..+. .. ... +. ..
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (511)
T 2weu_A 63 EREWLPRCAGGYKLGIRFENWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGS 142 (511)
T ss_dssp HHHHHHHTTCEEECEEEEESSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSC
T ss_pred HHHHHHHcCCeEeccceecCCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcC
Confidence 75 444322222222111 1110 00 000 00 00
Q ss_pred CC----C-----------C--CccceeecchHHHHHHHHHHHcCCCeEEEeCeEEEeeeeC-CeEEEEEEEcCCCcEEEE
Q 040732 173 NF----Q-----------A--NVAGRSFHNGRFIQRMREKAASLPNVRMEEGTVTSLFEEN-GIVKGVHYKTKDGQEHKS 234 (541)
Q Consensus 173 ~~----~-----------~--~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~v~~l~~~~-~~v~gV~v~~~~g~~~~v 234 (541)
.+ + . ...++.++|..|.+.|.+.+.+. |++++.++|+++..++ +.+.+| .+++|++ +
T Consensus 143 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~a~~~-gv~~~~~~v~~i~~~~~~~~~~v--~~~~g~~--~ 217 (511)
T 2weu_A 143 LFASQVDESLGRSTLAEQRAQFPYAYHFDADEVARYLSEYAIAR-GVRHVVDDVQHVGQDERGWISGV--HTKQHGE--I 217 (511)
T ss_dssp BCC------CCSCCGGGCCSCCSCEEEECHHHHHHHHHHHHHHT-TCEEEECCEEEEEECTTSCEEEE--EESSSCE--E
T ss_pred CccccccccccccccccCcCCCCeeEEEcHHHHHHHHHHHHHHC-CCEEEECeEeEEEEcCCCCEEEE--EECCCCE--E
Confidence 01 1 1 23467899999999999999886 8999988999998743 444444 4567764 5
Q ss_pred EcCEEEEecCCCCcccc-cccCCCcc---cccceEEEEEe-ecCCC--CCCeeEEEEcCCCcEEEEEccCCceEEEEEec
Q 040732 235 YAPLTIVCDGGFSNLRR-SLCNPKVD---IPSCFVGMALE-NCQLP--VPNHGHVVLTDPSPILFYPISSSEVRCLVDVP 307 (541)
Q Consensus 235 ~a~lvV~AdG~~S~vR~-~l~~~~~~---~~~~~~g~~~~-~~~~p--~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 307 (541)
+||+||+|||.+|.+|+ .++.+... ......++... ....+ ..........+.+++|++|.++ ...+.+...
T Consensus 218 ~ad~vV~A~G~~S~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~-~~~~g~~~~ 296 (511)
T 2weu_A 218 SGDLFVDCTGFRGLLINQTLGGRFQSFSDVLPNNRAVALRVPRENDEDMRPYTTATAMSAGWMWTIPLFK-RDGNGYVYS 296 (511)
T ss_dssp ECSEEEECCGGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECSSGGGCCSSEEEEEETTEEEEEEECSS-EEEEEEEEC
T ss_pred EcCEEEECCCcchHHHHHHhCCCCccccccCcccceEEEEeccCCCCCCCcceeceecCCCcEEEEECCC-ceEEEEEEC
Confidence 69999999999999954 55554221 11122222221 11111 1222334456678999999987 344433332
Q ss_pred CCCCCCCCCchhHHHHHHHhcCCCCChhhHHHHHhhhhcCCeeeccCccccCCCCCCCcEEEecccCCCCCCCCCcchhH
Q 040732 308 AGQKLPSIANGEMAKYLKTKVAPQIPDELRDAFISKVEKGSIRTATNRSMPAAPKTTPGALLLGDAFNMRHPLTGGGMTV 387 (541)
Q Consensus 308 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvliGDAah~~~P~~GqG~~~ 387 (541)
.. ..+.++..+.+.+.+.. .+ .+ .....++........+..+|+++||||||.++|+.|||+|+
T Consensus 297 -~~---~~~~~~~~~~l~~~~~~-~~-~~----------~~~~~~~~~~~~~~~~~~~rv~liGDAAh~~~P~~g~G~~~ 360 (511)
T 2weu_A 297 -DE---FISPEEAERELRSTVAP-GR-DD----------LEANHIQMRIGRNERTWINNCVAVGLSAAFVEPLESTGIFF 360 (511)
T ss_dssp -TT---TSCHHHHHHHHHHHHCT-TC-TT----------SCCEEEECCCEEESCSEETTEEECGGGTEECCGGGCCHHHH
T ss_pred -CC---CCCHHHHHHHHHHHhCc-cc-cc----------ccceeEEeeccccccccCCCEEEEechhhccCccccccHHH
Confidence 11 12334555555544321 11 11 11122232222344566799999999999999999999999
Q ss_pred HHhhHHHHHHhccccCCCCChHHHHHHHHHHHHHhcChhHHHHHHHHHHHhhhcCCChHHHHHHH
Q 040732 388 ALSDVVVLRNLIKPLQDFHDAASLNQYLESFYTLRKPVASTINTLANSAYQVFSASSDEAREVMR 452 (541)
Q Consensus 388 al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~~~~~~i~~ls~~l~~~~~~~~~~~~~~lr 452 (541)
|++||..|+++|... ...+.+++.|+++|+++...+..+....|.+......+.+...+
T Consensus 361 a~~da~~La~~l~~~------~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~~~r~~~~fw~~~~ 419 (511)
T 2weu_A 361 IQHAIEQLVKHFPGE------RWDPVLISAYNERMAHMVDGVKEFLVLHYKGAQREDTPYWKAAK 419 (511)
T ss_dssp HHHHHHHHHHTCCCT------TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSHHHHHHH
T ss_pred HHHHHHHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHhcc
Confidence 999999999999741 12356899999999999999998888888876544445544443
No 26
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.97 E-value=1.1e-28 Score=266.01 Aligned_cols=338 Identities=14% Similarity=0.118 Sum_probs=215.9
Q ss_pred CCCcEEEECCChHHHHHHHHHhh---CCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhH-HHHHCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGT---DGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYL-KLVELG 140 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~---~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~-~l~~lg 140 (541)
..+||||||||++|+++|+.|++ .|++|+|||+.+. +. ..+|+.+.|.+.. .++.+|
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~-~~------------------~~~g~~~~p~~~~~~l~~lG 84 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI-PT------------------LGVGEATIPNLQTAFFDFLG 84 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC-CC------------------CCCCEECCTHHHHHTHHHHT
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC-Cc------------------cceeeeechhHHHHHHHHhC
Confidence 46899999999999999999999 9999999999753 22 3456788899888 999999
Q ss_pred chhh--HhhccceeeeeeEEE--ECC-------------e-eeeecCC-----------------------C-C------
Q 040732 141 LDDC--VEEIDAHPVVGYALF--KDG-------------K-ITKTPYP-----------------------L-G------ 172 (541)
Q Consensus 141 l~~~--~~~~~~~~~~g~~~~--~~g-------------~-~~~~~~~-----------------------~-~------ 172 (541)
+.+. +.........++.+. ... . .....+. . .
T Consensus 85 i~~~~~~~~~~~~~~~g~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ 164 (550)
T 2e4g_A 85 IPEDEWMRECNASYKVAIKFINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACY 164 (550)
T ss_dssp CCHHHHHHHTTCEEECEEEEESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHC
T ss_pred CChHHHHHhcCCeEEEeeeEeecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhccccccccccccccc
Confidence 9865 543222211222211 000 0 0000000 0 0
Q ss_pred ------CC-------C---CCccceeecchHHHHHHHHHHHcCCCeEEEeCeEEEeeeeC-CeEEEEEEEcCCCcEEEEE
Q 040732 173 ------NF-------Q---ANVAGRSFHNGRFIQRMREKAASLPNVRMEEGTVTSLFEEN-GIVKGVHYKTKDGQEHKSY 235 (541)
Q Consensus 173 ------~~-------~---~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~v~~l~~~~-~~v~gV~v~~~~g~~~~v~ 235 (541)
.. . ....++.+++..+.+.|++.+.+.+|++++.++|+++..++ +.+.+|+ +++|++ +.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~~V~~i~~~~~g~~~~v~--~~~G~~--i~ 240 (550)
T 2e4g_A 165 KEPVILDANRSPRRLDGSKVTNYAWHFDAHLVADFLRRFATEKLGVRHVEDRVEHVQRDANGNIESVR--TATGRV--FD 240 (550)
T ss_dssp SHHHHHHTTBCSBCTTSCBCSCCEEEECHHHHHHHHHHHHHHHSCCEEEECCEEEEEECTTSCEEEEE--ETTSCE--EE
T ss_pred chhhHHHhhhhhHhhcCCCCCCcceEEcHHHHHHHHHHHHHhcCCcEEEECeEeEEEEcCCCCEEEEE--ECCCCE--EE
Confidence 00 0 12335679999999999999988668999988999998653 4444444 567764 56
Q ss_pred cCEEEEecCCCCcc-cccccCCCcccc---cceEEEEEe-ecCCC---CCCeeEEEEcCCCcEEEEEccCCceEEEEEec
Q 040732 236 APLTIVCDGGFSNL-RRSLCNPKVDIP---SCFVGMALE-NCQLP---VPNHGHVVLTDPSPILFYPISSSEVRCLVDVP 307 (541)
Q Consensus 236 a~lvV~AdG~~S~v-R~~l~~~~~~~~---~~~~g~~~~-~~~~p---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 307 (541)
||+||+|||.+|.+ ++.++.+..... .....+... ....+ ..........+.+++|++|..+. ..+.+...
T Consensus 241 ad~vI~A~G~~S~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ipl~~~-~~~g~v~~ 319 (550)
T 2e4g_A 241 ADLFVDCSGFRGLLINKAMEEPFLDMSDHLLNDSAVATQVPHDDDANGVEPFTSAIAMKSGWTWKIPMLGR-FGTGYVYS 319 (550)
T ss_dssp CSEEEECCGGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEECSSE-EEEEEEEC
T ss_pred CCEEEECCCCchhhHHHHhCCCcccccccccccceEEEeecccCCcccCCCceeeeecCCceEEEccCCCc-cceEEEEe
Confidence 99999999999999 556665422111 111222221 11111 11222333446788999999773 33333322
Q ss_pred CCCCCCCCCchhHHHHHHHhcCCCCChhhHHHHHhhhhcCCeeeccCccccCCCCCCCcEEEecccCCCCCCCCCcchhH
Q 040732 308 AGQKLPSIANGEMAKYLKTKVAPQIPDELRDAFISKVEKGSIRTATNRSMPAAPKTTPGALLLGDAFNMRHPLTGGGMTV 387 (541)
Q Consensus 308 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvliGDAah~~~P~~GqG~~~ 387 (541)
.. ..+.++..+.+.+.+... + .+ .....++.......++..+|+++||||||.++|++|||+|+
T Consensus 320 -~~---~~~~~~~~~~l~~~~~~~-p-~l----------~~~~~i~~~~~~~~~~~~~rvvliGDAAh~~~P~~GqGi~~ 383 (550)
T 2e4g_A 320 -SR---FATEDEAVREFCEMWHLD-P-ET----------QPLNRIRFRVGRNRRAWVGNCVSIGTSSCFVEPLESTGIYF 383 (550)
T ss_dssp -TT---TSCHHHHHHHHHHHTTCC-T-TT----------SCCEEEECCCEEESCSEETTEEECSTTTEECCGGGSCHHHH
T ss_pred -cC---CCChHHHHHHHHHhhCcC-c-cc----------CCCceEEecCCCccccccCCEEEEehhhcccCccchhhHHH
Confidence 11 123445555555544321 1 11 11122223222344566799999999999999999999999
Q ss_pred HHhhHHHHHHhccccCCCCChHHHHHHHHHHHHHhcChhHHHHHHHHHHHhhhcCCChHHH
Q 040732 388 ALSDVVVLRNLIKPLQDFHDAASLNQYLESFYTLRKPVASTINTLANSAYQVFSASSDEAR 448 (541)
Q Consensus 388 al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~~~~~~i~~ls~~l~~~~~~~~~~~~ 448 (541)
|++||..|+++|... ...+.+++.|+++|+++...+..+....|.+-...+.+.+
T Consensus 384 a~~da~~La~~L~~~------~~~~~~l~~Y~~~~~~~~~~i~~~~~~~y~~~~r~~~~fw 438 (550)
T 2e4g_A 384 VYAALYQLVKHFPDK------SLNPVLTARFNREIETMFDDTRDFIQAHFYFSPRTDTPFW 438 (550)
T ss_dssp HHHHHHHHHHTCCCT------TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSSHHH
T ss_pred HHHHHHHHHHhcccc------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHH
Confidence 999999999999641 1235799999999999999999888888876544333443
No 27
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.97 E-value=5.5e-29 Score=267.94 Aligned_cols=335 Identities=16% Similarity=0.128 Sum_probs=212.1
Q ss_pred CCCcEEEECCChHHHHHHHHHhh---CCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhH-HHHHCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGT---DGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYL-KLVELG 140 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~---~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~-~l~~lg 140 (541)
..+||||||||++|+++|+.|++ .|++|+|||+... +. ...|+.+.+.... .++.+|
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~-~~------------------~~~g~~~~~~~~~~~l~~lG 64 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAI-PR------------------IGVGEATIPSLQKVFFDFLG 64 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSS-CC------------------CCSCEECCTHHHHHTHHHHT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCC-CC------------------cCCCcccchhHHHHHHHHhC
Confidence 35899999999999999999999 9999999999653 33 3346778888888 899999
Q ss_pred chhh--HhhccceeeeeeEE----------------EECCeee-------------------eecC-------------C
Q 040732 141 LDDC--VEEIDAHPVVGYAL----------------FKDGKIT-------------------KTPY-------------P 170 (541)
Q Consensus 141 l~~~--~~~~~~~~~~g~~~----------------~~~g~~~-------------------~~~~-------------~ 170 (541)
+.+. +.........++.+ ...|... ...+ .
T Consensus 65 ~~~~~~~~~~~~~~~~g~~~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (538)
T 2aqj_A 65 IPEREWMPQVNGAFKAAIKFVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGK 144 (538)
T ss_dssp CCHHHHGGGGTCEEECEEEEESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTT
T ss_pred CCHHHHHHhcCchhhCCccccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhc
Confidence 8764 43322211112111 1111000 0000 0
Q ss_pred C------CCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCeEEEeeeeC-CeEEEEEEEcCCCcEEEEEcCEEEEec
Q 040732 171 L------GNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGTVTSLFEEN-GIVKGVHYKTKDGQEHKSYAPLTIVCD 243 (541)
Q Consensus 171 ~------~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~v~~l~~~~-~~v~gV~v~~~~g~~~~v~a~lvV~Ad 243 (541)
. ..+ ....++.+++..+.+.|.+.+.+. |++++.++|+++..++ +.+.+| .+++|++ ++||+||+||
T Consensus 145 ~~p~~~~~~~-~~~~~~~i~~~~l~~~L~~~a~~~-gv~~~~~~v~~i~~~~~g~~~~v--~~~~g~~--i~ad~vV~A~ 218 (538)
T 2aqj_A 145 LAPCLSDGTR-QMSHAWHFDAHLVADFLKRWAVER-GVNRVVDEVVDVRLNNRGYISNL--LTKEGRT--LEADLFIDCS 218 (538)
T ss_dssp BCSBCTTCCB-CSCCEEEECHHHHHHHHHHHHHHT-TCEEEECCEEEEEECTTSCEEEE--EETTSCE--ECCSEEEECC
T ss_pred cchHhhcCCc-CCCccEEEeHHHHHHHHHHHHHHC-CCEEEEeeEeEEEEcCCCcEEEE--EECCCcE--EEeCEEEECC
Confidence 0 000 123457899999999999999886 8999988999998754 334444 4567764 6699999999
Q ss_pred CCCCcccc-cccCCCcccc---cceEEEEEe-ecCCC---CCCeeEEEEcCCCcEEEEEccCCceEEEEEecCCCCCCCC
Q 040732 244 GGFSNLRR-SLCNPKVDIP---SCFVGMALE-NCQLP---VPNHGHVVLTDPSPILFYPISSSEVRCLVDVPAGQKLPSI 315 (541)
Q Consensus 244 G~~S~vR~-~l~~~~~~~~---~~~~g~~~~-~~~~p---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 315 (541)
|.+|.+|+ .++.+..... ....++... ....+ ..........+.+++|++|.+++ ..+.+.+. .. ..
T Consensus 219 G~~s~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~-~~~g~v~~-~~---~~ 293 (538)
T 2aqj_A 219 GMRGLLINQALKEPFIDMSDYLLCDSAVASAVPNDDARDGVEPYTSSIAMNSGWTWKIPMLGR-FGSGYVFS-SH---FT 293 (538)
T ss_dssp GGGCCCCCCCTCCCEEECTTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEEETTE-EEEEEEEC-TT---TS
T ss_pred CCchhhHHHHhCCCccccccccccceEEEEecccCCcccCCCCceeeeecCCceEEEecCCCc-eEEEEEEc-CC---CC
Confidence 99999965 4454322111 112233222 11101 11122334556788999999874 33333332 11 12
Q ss_pred CchhHHHHHHHhcCCCCChhhHHHHHhhhhcCCeeeccCccccCCCCCCCcEEEecccCCCCCCCCCcchhHHHhhHHHH
Q 040732 316 ANGEMAKYLKTKVAPQIPDELRDAFISKVEKGSIRTATNRSMPAAPKTTPGALLLGDAFNMRHPLTGGGMTVALSDVVVL 395 (541)
Q Consensus 316 ~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvliGDAah~~~P~~GqG~~~al~Da~~L 395 (541)
+.++..+.+.+.+.. ++ + .....++.......++..+|++++|||||.++|+.|||+|+|++||..|
T Consensus 294 ~~~~~~~~l~~~~~~--~~-~----------~~~~~~~~~~~~~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~L 360 (538)
T 2aqj_A 294 SRDQATADFLKLWGL--SD-N----------QPLNQIKFRVGRNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQL 360 (538)
T ss_dssp CHHHHHHHHHHHHTC--CT-T----------CCCEEEECCCEEESCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhcC--CC-C----------CCceEEeeccccccccccCCEEEEcccccccCcchhccHHHHHHHHHHH
Confidence 334455555544321 11 1 1122333333334567789999999999999999999999999999999
Q ss_pred HHhccccCCCCChHHHHHHHHHHHHHhcChhHHHHHHHHHHHhhhcCCChHHH
Q 040732 396 RNLIKPLQDFHDAASLNQYLESFYTLRKPVASTINTLANSAYQVFSASSDEAR 448 (541)
Q Consensus 396 a~~L~~~~~~~~~~~~~~~l~~Y~~~R~~~~~~i~~ls~~l~~~~~~~~~~~~ 448 (541)
+++|... ...+.+++.|+++|+++...+.......|..-.....+.+
T Consensus 361 a~~L~~~------~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~~~r~~~~fw 407 (538)
T 2aqj_A 361 VKHFPDT------SFDPRLSDAFNAEIVHMFDDCRDFVQAHYFTTSRDDTPFW 407 (538)
T ss_dssp HHTCCBT------TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSSHHH
T ss_pred HHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHH
Confidence 9999641 1235689999999999998888777777765433333443
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.94 E-value=1.2e-25 Score=235.21 Aligned_cols=326 Identities=14% Similarity=0.089 Sum_probs=183.7
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhh
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDC 144 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~ 144 (541)
..+||+||||||+|+++|+.|+++|++|+||||.+.... ..++. ..+..+.......++.+|+...
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~-~~g~~-------------~~~~~~~~~~~~~~~~lg~~~~ 86 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEY-SGLRL-------------LNTVAHNAVTVQREVALDVNEW 86 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGS-TTSCC-------------CCCCCBCHHHHHHHHHTTCCCS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhh-ccccc-------------ccchhccchhhhhhhhcChhhh
Confidence 347999999999999999999999999999999862211 11111 1112344556666777765321
Q ss_pred HhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCeE--EEeeeeCCeEEEE
Q 040732 145 VEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGTV--TSLFEENGIVKGV 222 (541)
Q Consensus 145 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~v--~~l~~~~~~v~gV 222 (541)
... .....++.+...+.. ...+.. .....++.+++..+...|.+.+.+. +++++..++ .++.
T Consensus 87 ~~~--~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~v~~~~l~~~L~~~~~~~-Gv~v~~~~v~~~~l~--------- 150 (430)
T 3ihm_A 87 PSE--EFGYFGHYYYVGGPQ-PMRFYG---DLKAPSRAVDYRLYQPMLMRALEAR-GGKFCYDAVSAEDLE--------- 150 (430)
T ss_dssp CHH--HHCEEEEEEEECSSS-CEEEEE---EEEEEEBEECHHHHHHHHHHHHHHT-TCEEEECCCCGGGHH---------
T ss_pred hhh--cccccceeEEECCCC-ccccch---hcCCcceeecHHHHHHHHHHHHHHc-CCEEEEEecchhhhh---------
Confidence 111 123344444433221 111100 0012356788889999999999887 777766432 1110
Q ss_pred EEEcCCCcEEEEEcCEEEEecCCCCcccccccCC---CcccccceEEEEEe-ecCCCCCCe-eEEEEcCCCcEEEEEccC
Q 040732 223 HYKTKDGQEHKSYAPLTIVCDGGFSNLRRSLCNP---KVDIPSCFVGMALE-NCQLPVPNH-GHVVLTDPSPILFYPISS 297 (541)
Q Consensus 223 ~v~~~~g~~~~v~a~lvV~AdG~~S~vR~~l~~~---~~~~~~~~~g~~~~-~~~~p~~~~-~~~~~~~~~~~~~~p~~~ 297 (541)
.....+|+||+|||.+|.+|...... ....+......... ....+.+.. ...++...++++++|...
T Consensus 151 --------~~~~~ad~VV~AdG~~S~~~~~~~~~~~~~~~~p~r~~~~~~~~g~~~~~~~~~~~~~~~~~G~~~~~p~~~ 222 (430)
T 3ihm_A 151 --------GLSEQYDLLVVCTGKYALGKVFEKQSENSPFEKPQRALCVGLFKGIKEAPIRAVTMSFSPGHGELIEIPTLS 222 (430)
T ss_dssp --------HHHTTSSEEEECCCCTTGGGGSCBCGGGCCCSSCSSEEEEEEEESBCCCSSCCEEEEEETTTEEEEEEEEEE
T ss_pred --------hhcccCCEEEECCCCcchHHhccCCCCCCcccCCCeeEEEEEEccCCCCCcCeeeeeecCCCcceEEecccC
Confidence 00113899999999999887543221 11112222222222 222233222 233445557888888633
Q ss_pred --CceEEEE--EecCCCCCCCC-------CchhHHHHHHHhcCCCCChhhHHHHHhhh--h---cCCe---eeccCcccc
Q 040732 298 --SEVRCLV--DVPAGQKLPSI-------ANGEMAKYLKTKVAPQIPDELRDAFISKV--E---KGSI---RTATNRSMP 358 (541)
Q Consensus 298 --~~~~~~~--~~~~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~l~~~~~~~~--~---~~~~---~~~~~~~~~ 358 (541)
+...+++ ..+ +.....+ +.++..+.+.+.+.... +.+.+.+.... . ...+ ..+|....+
T Consensus 223 ~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 300 (430)
T 3ihm_A 223 FNGMSTALVLENHI-GSDLEVLAHTKYDDDPRAFLDLMLEKLGKHH-PSVAERIDPAEFDLANSSLDILQGGVVPAFRDG 300 (430)
T ss_dssp TTEEEEEEEEEECT-TSSSGGGGTSCTTTCHHHHHHHHHHHHHHHC-HHHHTTBCTTTCEESSSTTSEEEECCCCEEBCS
T ss_pred CCcceEEEEEEecC-CCcHHHhccccCCCCHHHHHHHHHHHHHHhC-ccHHHHHhhchhccccCccceeecceeeccccc
Confidence 3333333 222 2111111 23333334443322111 12221111110 0 1111 234444455
Q ss_pred CCCCCCCcEEE-ecccCCCCCCCCCcchhHHHhhHHHHHHhccccCCCCChHHHHHHHHHHHHHhc-ChhHHHHHHHHHH
Q 040732 359 AAPKTTPGALL-LGDAFNMRHPLTGGGMTVALSDVVVLRNLIKPLQDFHDAASLNQYLESFYTLRK-PVASTINTLANSA 436 (541)
Q Consensus 359 ~~~~~~~~vvl-iGDAah~~~P~~GqG~~~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~-~~~~~i~~ls~~l 436 (541)
..+|..+|++| +|||||.++|++|||+|+||+||.+|+++|.... + .++++..|+.+|+ .++..+...++.+
T Consensus 301 ~~~~~~~~~~ll~GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~~---~---~~~~~~~~~~~r~~~~~~~~~~~~~~~ 374 (430)
T 3ihm_A 301 HATLNNGKTIIGLGDIQATVDPVLGQGANMASYAAWILGEEILAHS---V---YDLRFSEHLERRRQDRVLCATRWTNFT 374 (430)
T ss_dssp EEECTTSCEEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHCS---C---CSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCEEEEecCccccCCCchhhhHHHHHHHHHHHHHHHHhcC---C---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66788899888 9999999999999999999999999999998752 1 4579999999998 6666665555544
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.88 E-value=6.5e-23 Score=217.91 Aligned_cols=309 Identities=15% Similarity=0.073 Sum_probs=174.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchh
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDD 143 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~ 143 (541)
...+||+|||||++|+++|+.|+++|++|+|||+.+.... .....+.+...+.++.+|+.+
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~-------------------~~~~~~~~~~~~~l~~~g~~~ 150 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR-------------------HNVLHLWPFTIHDLRALGAKK 150 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC-------------------CCEEECCHHHHHHHHTTTHHH
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC-------------------CCcccCChhHHHHHHHcCCcc
Confidence 4578999999999999999999999999999999864322 111235677788888888764
Q ss_pred hHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeee--CCeEE
Q 040732 144 CVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEE--NGIVK 220 (541)
Q Consensus 144 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~--~~~v~ 220 (541)
.... +... ....+++.++.+.|.+.+.+. +++++.++ |+++..+ ++...
T Consensus 151 ~~~~---------------------~~~~------~~~~~~~~~l~~~L~~~~~~~-gv~v~~~~~v~~i~~~~~~~~~~ 202 (497)
T 2bry_A 151 FYGR---------------------FCTG------TLDHISIRQLQLLLLKVALLL-GVEIHWGVKFTGLQPPPRKGSGW 202 (497)
T ss_dssp HCTT---------------------TTCT------TCCEEEHHHHHHHHHHHHHHT-TCEEEESCEEEEEECCCSTTCCB
T ss_pred cccc---------------------cccc------ccccCCHHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEecCCCCEE
Confidence 3211 0000 012467788999999999885 89999987 9998764 23334
Q ss_pred EEEEEcC-CCcEEEEEcCEEEEecCCCCcccccccCCCcccc-cceEEEEEee-----cCCCCCCeeEEEEcC-------
Q 040732 221 GVHYKTK-DGQEHKSYAPLTIVCDGGFSNLRRSLCNPKVDIP-SCFVGMALEN-----CQLPVPNHGHVVLTD------- 286 (541)
Q Consensus 221 gV~v~~~-~g~~~~v~a~lvV~AdG~~S~vR~~l~~~~~~~~-~~~~g~~~~~-----~~~p~~~~~~~~~~~------- 286 (541)
+|++... +|+..+++||+||+|||.+|.+|+..+.+..... .......+.. ..++ +..+..+...
T Consensus 203 ~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~-~~~G~~~~~~~~~f~~~ 281 (497)
T 2bry_A 203 RAQLQPNPPAQLASYEFDVLISAAGGKFVPEGFTIREMRGKLAIGITANFVNGRTVEETQVP-EISGVARIYNQKFFQSL 281 (497)
T ss_dssp EEEEESCCCHHHHTCCBSEEEECCCTTCCCTTCEEEEEECSCCEEEEEEEECCCCHHHHTSC-CBCC----CCSSHHHHH
T ss_pred EEEEEECCCCCEEEEEcCEEEECCCCCcccccccchhhcCceeEeeeeeeeeeccccccchh-hcCceEEecChhhhHhH
Confidence 5665544 6632336699999999999999987654332222 1111111110 0011 1111111100
Q ss_pred ---CC-cEE-EEEccCCceEEEEEecCC-----CCC----C----------CCCchhHHHHH---HHhcCCCCChhhH--
Q 040732 287 ---PS-PIL-FYPISSSEVRCLVDVPAG-----QKL----P----------SIANGEMAKYL---KTKVAPQIPDELR-- 337 (541)
Q Consensus 287 ---~~-~~~-~~p~~~~~~~~~~~~~~~-----~~~----~----------~~~~~~~~~~l---~~~~~~~~~~~l~-- 337 (541)
.+ +.. ++|.+++...+.+... . ... . ..+..++..+- .++......+.+.
T Consensus 282 ~~~~Gi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (497)
T 2bry_A 282 LKATGIDLENIVYYKDETHYFVMTAK-KQCLLRLGVLRQDLSETDQLLGKANVVPEALQRFARAAADFATHGKLGKLEFA 360 (497)
T ss_dssp HHHHCCCEEEEEEEESSEEEEEEEEC-HHHHHHTTSBSSCCSSHHHHTSTTTBCHHHHHHHHHHHHHHHTTTTTCSCCBC
T ss_pred HhhcCCCcccccccCCCeEEEEeccc-cccccccceeeccccchHhhhhhccCCHHHHHHhhccccccchhhccccchhh
Confidence 01 121 4455555433333211 0 000 0 00111111110 0010000000000
Q ss_pred -HHHHh---hh-hcCCeeeccCccccCCCCCCCc-EEEecccCCCCCCCCCcchhHHHhhHHHHHHhccccCCCCChHHH
Q 040732 338 -DAFIS---KV-EKGSIRTATNRSMPAAPKTTPG-ALLLGDAFNMRHPLTGGGMTVALSDVVVLRNLIKPLQDFHDAASL 411 (541)
Q Consensus 338 -~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~-vvliGDAah~~~P~~GqG~~~al~Da~~La~~L~~~~~~~~~~~~ 411 (541)
+.+.. .+ +......|+...+.+.+|..|| ++++|||+|..+|..|||+|.+++||..|+|+|+........
T Consensus 361 ~~~~g~~~~~~~~~~~~~~~~~~~r~a~~~~~gRr~~l~Gda~~~~~~p~g~G~n~g~~~a~~l~~~l~~~~~g~~~--- 437 (497)
T 2bry_A 361 QDARGRPDVAAFDFTSMMRAESSARVQEKHGARLLLGLVGDCLVEPFWPLGTGVARGFLAAFDAAWMVKRWAEGAGP--- 437 (497)
T ss_dssp BCTTSSBCEEEEECSEEEEESCSEEEEEETTEEEEEEECGGGTBCCCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCH---
T ss_pred hhccCCCCCceeeeEEEEecchhhHHHHhcCCcccceEeccccccCcCccccchhhHHHHHHHHHHHHHHHhCCCCc---
Confidence 00000 00 1122345666677778889998 999999999444339999999999999999999876321112
Q ss_pred HHHHHHHHHHhcChhHH
Q 040732 412 NQYLESFYTLRKPVAST 428 (541)
Q Consensus 412 ~~~l~~Y~~~R~~~~~~ 428 (541)
...| .+|++.+..
T Consensus 438 ~~~l----~~r~~~~~~ 450 (497)
T 2bry_A 438 LEVL----AERESLYQL 450 (497)
T ss_dssp HHHH----HHHHHHHTT
T ss_pred cchh----hhHHHHhhh
Confidence 2344 667665543
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.74 E-value=2.9e-17 Score=165.47 Aligned_cols=306 Identities=11% Similarity=0.084 Sum_probs=141.9
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
.+||+|||||++|+++|+.|+++|++|+|+||.+............... + ......+........+.+..+...
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~ 75 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGA---L---DMGAQYFTARDRRFATAVKQWQAQ 75 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEE---E---ECSCCCBCCCSHHHHHHHHHHHHH
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCe---E---ecCCCeEecCCHHHHHHHHHHHhC
Confidence 4699999999999999999999999999999986432211111100000 0 001111222111111111111110
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
.. .....+......... +.... .... ....+..+.. |.+.+.+ +++++.++ |+++..+++ ++++
T Consensus 76 ~~--~~~~~~~~~~~~~~~----~~~~~--~~~~-~~~~~~~~~~-l~~~l~~--g~~i~~~~~v~~i~~~~~---~~~v 140 (336)
T 1yvv_A 76 GH--VAEWTPLLYNFHAGR----LSPSP--DEQV-RWVGKPGMSA-ITRAMRG--DMPVSFSCRITEVFRGEE---HWNL 140 (336)
T ss_dssp TS--EEEECCCEEEESSSB----CCCCC--TTSC-EEEESSCTHH-HHHHHHT--TCCEECSCCEEEEEECSS---CEEE
T ss_pred CC--eeeccccceeccCcc----cccCC--CCCc-cEEcCccHHH-HHHHHHc--cCcEEecCEEEEEEEeCC---EEEE
Confidence 00 011111111111111 00000 0111 1122222322 3333332 67888887 999987766 3556
Q ss_pred EcCCCcEEEEEcCEEEEecCCCCcccccccCC-------CcccccceEEEEEeecCCCCCCeeEEEEcCCCcEEEE----
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGFSNLRRSLCNP-------KVDIPSCFVGMALENCQLPVPNHGHVVLTDPSPILFY---- 293 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~S~vR~~l~~~-------~~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~---- 293 (541)
++++|+.. ..+|+||+|+|.+|.+|..-..+ ...........+........+. ..++...+++.++
T Consensus 141 ~~~~g~~~-~~a~~vV~a~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~ 217 (336)
T 1yvv_A 141 LDAEGQNH-GPFSHVIIATPAPQASTLLAAAPKLASVVAGVKMDPTWAVALAFETPLQTPM--QGCFVQDSPLDWLARNR 217 (336)
T ss_dssp EETTSCEE-EEESEEEECSCHHHHGGGGTTCHHHHHHHTTCCEEEEEEEEEEESSCCSCCC--CEEEECSSSEEEEEEGG
T ss_pred EeCCCcCc-cccCEEEEcCCHHHHHHhhccCHHHHHHHhhcCccceeEEEEEecCCCCCCC--CeEEeCCCceeEEEecC
Confidence 67788743 35899999999999988653221 1111111111111122222121 2223334554444
Q ss_pred --EccCCc-eEEEEEecCC--CCCCCCCchhHHHHHHHhcCCCCChhhHHHHHhhhhcCCe-eeccCccccCCCC--CCC
Q 040732 294 --PISSSE-VRCLVDVPAG--QKLPSIANGEMAKYLKTKVAPQIPDELRDAFISKVEKGSI-RTATNRSMPAAPK--TTP 365 (541)
Q Consensus 294 --p~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~ 365 (541)
|...+. ..+++..... ......+.++..+.+.+.+...+.....+. .......+ ..+|......... ..+
T Consensus 218 ~~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~~~~p--~~~~~~rw~~a~~~~~~~~~~~~~~~~ 295 (336)
T 1yvv_A 218 SKPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCTMPAP--VFSLAHRWLYARPAGAHEWGALSDADL 295 (336)
T ss_dssp GSTTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSCCCCC--SEEEEEEEEEEEESSCCCCSCEEETTT
T ss_pred cCCCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCCCC--cEEEccccCccCCCCCCCCCeeecCCC
Confidence 333333 3444443200 112223344444444332222221110000 00000011 1223322222222 348
Q ss_pred cEEEecccCCCCCCCCCcchhHHHhhHHHHHHhccccC
Q 040732 366 GALLLGDAFNMRHPLTGGGMTVALSDVVVLRNLIKPLQ 403 (541)
Q Consensus 366 ~vvliGDAah~~~P~~GqG~~~al~Da~~La~~L~~~~ 403 (541)
|++|+|||+| |.|++.|+.|+..||+.|.+..
T Consensus 296 rl~laGDa~~------g~gv~~a~~sg~~lA~~l~~~~ 327 (336)
T 1yvv_A 296 GIYVCGDWCL------SGRVEGAWLSGQEAARRLLEHL 327 (336)
T ss_dssp TEEECCGGGT------TSSHHHHHHHHHHHHHHHHHHT
T ss_pred CEEEEecCCC------CCCHHHHHHHHHHHHHHHHHHh
Confidence 9999999996 4599999999999999987653
No 31
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.61 E-value=4.3e-15 Score=152.27 Aligned_cols=194 Identities=16% Similarity=0.128 Sum_probs=108.1
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcCCCcEEEEEcCEEEEecCCCCc-ccccccCCCc
Q 040732 181 RSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFSN-LRRSLCNPKV 258 (541)
Q Consensus 181 ~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~-vR~~l~~~~~ 258 (541)
..++..++.+.|.+.+++. +++++.++ |+++..+++.+ +| .+++| +++||.||+|+|.+|. +.+.++...+
T Consensus 159 ~~~~~~~~~~~l~~~~~~~-g~~i~~~~~v~~i~~~~~~~-~v--~~~~g---~~~a~~vV~A~G~~s~~l~~~~~~~~~ 231 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKML-GAEIFEHTPVLHVERDGEAL-FI--KTPSG---DVWANHVVVASGVWSGMFFKQLGLNNA 231 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHT-TCEEETTCCCCEEECSSSSE-EE--EETTE---EEEEEEEEECCGGGTHHHHHHTTCCCC
T ss_pred eEEcHHHHHHHHHHHHHHC-CCEEEcCCcEEEEEEECCEE-EE--EcCCc---eEEcCEEEECCChhHHHHHHhcCCCCc
Confidence 3466778999999999887 89999886 99998776654 34 45555 3669999999999986 7666654322
Q ss_pred ccccceEEEEEe-ecCCCCCCeeEEEEcCCCcEEEEEccCCceEEEEEecCCCCCCCCCchhHHHHHHHhcCCCCChhhH
Q 040732 259 DIPSCFVGMALE-NCQLPVPNHGHVVLTDPSPILFYPISSSEVRCLVDVPAGQKLPSIANGEMAKYLKTKVAPQIPDELR 337 (541)
Q Consensus 259 ~~~~~~~g~~~~-~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 337 (541)
..+ ..+..+. ....+.. ...++.+ ..+++|..++.+.+............. ..+..+.+.+.+...+| .+.
T Consensus 232 ~~~--~~g~~~~~~~~~~~~--~~~~~~~--~~~~~p~~~g~~~vG~~~~~~~~~~~~-~~~~~~~l~~~~~~~~p-~l~ 303 (382)
T 1ryi_A 232 FLP--VKGECLSVWNDDIPL--TKTLYHD--HCYIVPRKSGRLVVGATMKPGDWSETP-DLGGLESVMKKAKTMLP-AIQ 303 (382)
T ss_dssp CEE--EEEEEEEEECCSSCC--CSEEEET--TEEEEECTTSEEEEECCCEETCCCCSC-CHHHHHHHHHHHHHHCG-GGG
T ss_pred eec--cceEEEEECCCCCCc--cceEEcC--CEEEEEcCCCeEEEeecccccCCCCCC-CHHHHHHHHHHHHHhCC-CcC
Confidence 222 2233322 1111111 1233333 578889877754333221101111111 22222222222111121 111
Q ss_pred HHHHhhhhcCCe-eeccCccccCCCCCCCcEEEecccC-----CCCCCCCCcchhHHHhhHHHHHHhccc
Q 040732 338 DAFISKVEKGSI-RTATNRSMPAAPKTTPGALLLGDAF-----NMRHPLTGGGMTVALSDVVVLRNLIKP 401 (541)
Q Consensus 338 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~vvliGDAa-----h~~~P~~GqG~~~al~Da~~La~~L~~ 401 (541)
...+ ..|... .++..++..++|++. ....++.|.|+..|...+..+++.+..
T Consensus 304 --------~~~~~~~w~g~----~~~t~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 304 --------NMKVDRFWAGL----RPGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIMN 361 (382)
T ss_dssp --------GSEEEEEEEEE----EEECSSSCCEEEEETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHTT
T ss_pred --------CCceeeEEEEe----cccCCCCCcEeccCCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHhC
Confidence 1111 111110 112345566778763 345789999999999999999999865
No 32
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.60 E-value=3.5e-14 Score=146.63 Aligned_cols=197 Identities=15% Similarity=0.098 Sum_probs=106.8
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcCCCcEEEEEcCEEEEecCCCC-cccccccCCCcc
Q 040732 182 SFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFS-NLRRSLCNPKVD 259 (541)
Q Consensus 182 ~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S-~vR~~l~~~~~~ 259 (541)
.++...+.+.|.+.+++. +++++.++ |+++..+++.+.+|+ +++| ++.||.||+|+|.+| .+++.++...+.
T Consensus 170 ~~~~~~~~~~l~~~~~~~-g~~i~~~~~v~~i~~~~~~~~~v~--~~~g---~~~a~~vV~a~G~~s~~l~~~~g~~~~~ 243 (405)
T 2gag_B 170 IAKHDHVAWAFARKANEM-GVDIIQNCEVTGFIKDGEKVTGVK--TTRG---TIHAGKVALAGAGHSSVLAEMAGFELPI 243 (405)
T ss_dssp BCCHHHHHHHHHHHHHHT-TCEEECSCCEEEEEESSSBEEEEE--ETTC---CEEEEEEEECCGGGHHHHHHHHTCCCCE
T ss_pred cCCHHHHHHHHHHHHHHC-CCEEEcCCeEEEEEEeCCEEEEEE--eCCc---eEECCEEEECCchhHHHHHHHcCCCCCc
Confidence 355567899999999887 89999986 999988777665554 4566 356999999999998 677777664433
Q ss_pred cccceEEEEEeecCCCCCCeeEEEEcCCCcEEEEEccCCceEEEEEecCCCC-CCCCCchhHHHHHHHhcCCCCChhhHH
Q 040732 260 IPSCFVGMALENCQLPVPNHGHVVLTDPSPILFYPISSSEVRCLVDVPAGQK-LPSIANGEMAKYLKTKVAPQIPDELRD 338 (541)
Q Consensus 260 ~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~l~~ 338 (541)
.+.......... .+.. ...+++.....+++.|..++.+.+......... ....+. +..+.+.+.....+| .+
T Consensus 244 ~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~y~~p~~~g~~~ig~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~p-~l-- 316 (405)
T 2gag_B 244 QSHPLQALVSEL--FEPV-HPTVVMSNHIHVYVSQAHKGELVMGAGIDSYNGYGQRGAF-HVIQEQMAAAVELFP-IF-- 316 (405)
T ss_dssp EEEEEEEEEEEE--BCSC-CCSEEEETTTTEEEEECTTSEEEEEEEECSSCCCSSCCCT-HHHHHHHHHHHHHCG-GG--
T ss_pred cccceeEEEecC--Cccc-cCceEEeCCCcEEEEEcCCCcEEEEeccCCCCccccCCCH-HHHHHHHHHHHHhCC-cc--
Confidence 322222222211 1111 112334444678888987776665544321111 111222 222222221111111 11
Q ss_pred HHHhhhhcCCe-eeccCccccCCCCCCCcEEEecccC--C--CCCCCCCcchhHHHhhHHHHHHhccc
Q 040732 339 AFISKVEKGSI-RTATNRSMPAAPKTTPGALLLGDAF--N--MRHPLTGGGMTVALSDVVVLRNLIKP 401 (541)
Q Consensus 339 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~vvliGDAa--h--~~~P~~GqG~~~al~Da~~La~~L~~ 401 (541)
....+ ..|... .+...++..++|++. + ...-+.|.|+..|..-+..|++.+..
T Consensus 317 ------~~~~~~~~w~g~----~~~t~d~~p~ig~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~g 374 (405)
T 2gag_B 317 ------ARAHVLRTWGGI----VDTTMDASPIISKTPIQNLYVNCGWGTGGFKGTPGAGFTLAHTIAN 374 (405)
T ss_dssp ------GGCEECEEEEEE----EEEETTSCCEEEECSSBTEEEEECCGGGCSTTHHHHHHHHHHHHHH
T ss_pred ------ccCCcceEEeec----cccCCCCCCEecccCCCCEEEEecCCCchhhHHHHHHHHHHHHHhC
Confidence 11111 111110 112346677888864 2 22334566777777777777776653
No 33
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.59 E-value=4.2e-14 Score=144.92 Aligned_cols=197 Identities=16% Similarity=0.068 Sum_probs=105.8
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcCCCcEEEEEcCEEEEecCCCC-cccccccCC--C
Q 040732 182 SFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFS-NLRRSLCNP--K 257 (541)
Q Consensus 182 ~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S-~vR~~l~~~--~ 257 (541)
.++..++.+.|.+.+++. +++++.++ |+++..+++.+.+|+ +.+| +++||.||.|+|.+| .+.+.++.. .
T Consensus 145 ~~~~~~l~~~l~~~~~~~-Gv~i~~~~~v~~i~~~~~~v~gv~--~~~g---~i~a~~VV~A~G~~s~~l~~~~g~~~~~ 218 (382)
T 1y56_B 145 KADPFEATTAFAVKAKEY-GAKLLEYTEVKGFLIENNEIKGVK--TNKG---IIKTGIVVNATNAWANLINAMAGIKTKI 218 (382)
T ss_dssp EECHHHHHHHHHHHHHHT-TCEEECSCCEEEEEESSSBEEEEE--ETTE---EEECSEEEECCGGGHHHHHHHHTCCSCC
T ss_pred eECHHHHHHHHHHHHHHC-CCEEECCceEEEEEEECCEEEEEE--ECCc---EEECCEEEECcchhHHHHHHHcCCCcCc
Confidence 466778999999999887 89999986 999988777665554 4556 366999999999998 466666544 3
Q ss_pred cccccceEEEEEeecCCCCCCeeEEEEcCC-CcEEEEEccCCceEEEEE-ecCCCC-CCCCCchhHHHHHHHhcCCCCCh
Q 040732 258 VDIPSCFVGMALENCQLPVPNHGHVVLTDP-SPILFYPISSSEVRCLVD-VPAGQK-LPSIANGEMAKYLKTKVAPQIPD 334 (541)
Q Consensus 258 ~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~ 334 (541)
+..+. .+........+.......++... ..+++.|..++ +.+... ...... ....+. +..+.+.+.....+|
T Consensus 219 ~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~y~~p~~~g-~~iG~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~p- 293 (382)
T 1y56_B 219 PIEPY--KHQAVITQPIKRGTINPMVISFKYGHAYLTQTFHG-GIIGGIGYEIGPTYDLTPTY-EFLREVSYYFTKIIP- 293 (382)
T ss_dssp CCEEE--EEEEEEECCCSTTSSCSEEEESTTTTEEEECCSSS-CCEEECSCCBSSCCCCCCCH-HHHHHHHHHHHHHCG-
T ss_pred CCCee--EeEEEEEccCCcccCCCeEEecCCCeEEEEEeCCe-EEEecCCCCCCCCCCCCCCH-HHHHHHHHHHHHhCC-
Confidence 22222 22222211111111113334333 56788888776 433321 110111 111222 222222221111111
Q ss_pred hhHHHHHhhhhcCCe-eeccCccccCCCCCCCcEEEecccC-----CCCCCCCCcchhHHHhhHHHHHHhccc
Q 040732 335 ELRDAFISKVEKGSI-RTATNRSMPAAPKTTPGALLLGDAF-----NMRHPLTGGGMTVALSDVVVLRNLIKP 401 (541)
Q Consensus 335 ~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~vvliGDAa-----h~~~P~~GqG~~~al~Da~~La~~L~~ 401 (541)
.+ ...++ ..|... + +...++..+||... ....-+.|.|+..|..-+..+++.+..
T Consensus 294 ~l--------~~~~~~~~~~g~-r---~~t~d~~p~ig~~~~~~~~~~~~G~~g~G~~~a~~~g~~la~~i~~ 354 (382)
T 1y56_B 294 AL--------KNLLILRTWAGY-Y---AKTPDSNPAIGRIEELNDYYIAAGFSGHGFMMAPAVGEMVAELITK 354 (382)
T ss_dssp GG--------GGSEEEEEEEEE-E---EECTTSCCEEEEESSSBTEEEEECCTTCHHHHHHHHHHHHHHHHHH
T ss_pred Cc--------CCCCceEEEEec-c---ccCCCCCcEeccCCCCCCEEEEEecCcchHhhhHHHHHHHHHHHhC
Confidence 11 11111 111100 0 11124445566543 223457899999999999999998864
No 34
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.58 E-value=2.2e-14 Score=145.85 Aligned_cols=185 Identities=18% Similarity=0.142 Sum_probs=102.0
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchh
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDD 143 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~ 143 (541)
+.++||+|||||++|+++|+.|+++|++|+|+||.+......++.+...++.....+.......+...+.+.+.++. +
T Consensus 2 ~~~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 79 (369)
T 3dme_A 2 STDIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYC--A 79 (369)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSCSTTSSSCCEECCCCSSCTTCHHHHHHHHHHHHHHHHH--H
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCccCcCCccccccCccCCCCCHhHHHHHHHHHHHHHHH--H
Confidence 45689999999999999999999999999999998644444444444333221110000000001111111111110 0
Q ss_pred hHhhccceeeee----------------------------eEEEECCeeeeecCCCCCCC---CCccceeecchHHHHHH
Q 040732 144 CVEEIDAHPVVG----------------------------YALFKDGKITKTPYPLGNFQ---ANVAGRSFHNGRFIQRM 192 (541)
Q Consensus 144 ~~~~~~~~~~~g----------------------------~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~r~~l~~~L 192 (541)
.. .+.. ...+ ..+...... ...++..... .......++...+.+.|
T Consensus 80 ~~-~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 156 (369)
T 3dme_A 80 AR-GVPH-QRLGKLIVATSDAEASQLDSIARRAGANGVDDLQHIDGAAA-RRLEPALHCTAALVSPSTGIVDSHALMLAY 156 (369)
T ss_dssp HH-TCCE-ECCCEEEEECSHHHHTTHHHHHHHHHHTTCCCCEEEEHHHH-HHHCTTCCCSEEEEETTCEEECHHHHHHHH
T ss_pred Hc-CCCc-ccCCEEEEecCHHHHHHHHHHHHHHHHcCCCceeecCHHHH-HHhCCCceeeeeeECCCCEEECHHHHHHHH
Confidence 00 0000 0011 111110000 0001110000 00112346677899999
Q ss_pred HHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcCCCcEEEEEcCEEEEecCCCC-cccccc-cCC
Q 040732 193 REKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFS-NLRRSL-CNP 256 (541)
Q Consensus 193 ~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S-~vR~~l-~~~ 256 (541)
.+.+++. |+++++++ |+++..+++.. +.+.+++|+..+++||.||+|+|.+| .+.+.+ +.+
T Consensus 157 ~~~~~~~-Gv~i~~~~~v~~i~~~~~~~--~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~ 220 (369)
T 3dme_A 157 QGDAESD-GAQLVFHTPLIAGRVRPEGG--FELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIP 220 (369)
T ss_dssp HHHHHHT-TCEEECSCCEEEEEECTTSS--EEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETSC
T ss_pred HHHHHHC-CCEEECCCEEEEEEEcCCce--EEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCCC
Confidence 9999887 89999886 99998876542 33456677655678999999999998 456666 553
No 35
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.57 E-value=5.7e-14 Score=149.39 Aligned_cols=317 Identities=14% Similarity=0.064 Sum_probs=155.8
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhh----HHHHHCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGY----LKLVELG 140 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~----~~l~~lg 140 (541)
..+||+|||||++|+++|+.|+++|++|+|+||.. ...+.++++...++...- .+..... +.+++.
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~-~~~gtS~~s~gli~~g~~--------~~~~~~~~l~~~~~~~~- 71 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQD-LACATSSASSKLIHGGLR--------YLEHYEFRLVSEALAER- 71 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS-TTCSGGGSSCCEECCCGG--------GGGGTCHHHHHHHHHHH-
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCC-CCCCccccccccccccch--------hhhhchHHHHHHHHHHH-
Confidence 45899999999999999999999999999999975 444555565555442110 0000000 111110
Q ss_pred chhhHhhcc--ceeeeeeEEEEC--------------------------CeeeeecC--CCCC--CCC--Cccceeecch
Q 040732 141 LDDCVEEID--AHPVVGYALFKD--------------------------GKITKTPY--PLGN--FQA--NVAGRSFHNG 186 (541)
Q Consensus 141 l~~~~~~~~--~~~~~g~~~~~~--------------------------g~~~~~~~--~~~~--~~~--~~~~~~~~r~ 186 (541)
..+.... .....++.+-.. ........ |.-. ... ......++..
T Consensus 72 --~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~P~l~~~~~~~~~~~~g~v~~~ 149 (501)
T 2qcu_A 72 --EVLLKMAPHIAFPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDA 149 (501)
T ss_dssp --HHHHHHCTTTEEEEEEEEECCTTTSCHHHHHHHHHHHHSSSCCSSSCCCEEEECCTTSSBCTTCCEEEEEEEEEECHH
T ss_pred --HHHHHhCCccccccCeEeccCcccchHHHHHHHHHHHHhcCCcEEECHHHHHHhhcCCCcchhceEEEEeeCCEEcHH
Confidence 0000000 000001100000 00000011 1000 000 0012236788
Q ss_pred HHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEc-CCCcEEEEEcCEEEEecCCCCc-cccc-ccCC--Cccc
Q 040732 187 RFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKT-KDGQEHKSYAPLTIVCDGGFSN-LRRS-LCNP--KVDI 260 (541)
Q Consensus 187 ~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~-~~g~~~~v~a~lvV~AdG~~S~-vR~~-l~~~--~~~~ 260 (541)
++...|.+.+.+. |++++.++ |+++..++ ++.+|++.+ .+|+..+++||.||+|+|.+|. +++. ++.. .+-.
T Consensus 150 ~l~~~l~~~a~~~-Gv~i~~~~~V~~l~~~~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~~~~i~ 227 (501)
T 2qcu_A 150 RLVLANAQMVVRK-GGEVLTRTRATSARREN-GLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSPYGIR 227 (501)
T ss_dssp HHHHHHHHHHHHT-TCEEECSEEEEEEEEET-TEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCCCSSCBC
T ss_pred HHHHHHHHHHHHc-CCEEEcCcEEEEEEEeC-CEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCCcccccc
Confidence 8999999999887 89999886 99998776 456677654 4677666889999999999985 4543 4432 1222
Q ss_pred ccceEEEEEeecCCCCCCeeEEEEc-CCCcEEEEEccCCceEEEEEec--CCC-CCCCCCchhHHHHHHHhcCCCCChhh
Q 040732 261 PSCFVGMALENCQLPVPNHGHVVLT-DPSPILFYPISSSEVRCLVDVP--AGQ-KLPSIANGEMAKYLKTKVAPQIPDEL 336 (541)
Q Consensus 261 ~~~~~g~~~~~~~~p~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~l~~~~~~~~~~~l 336 (541)
+..-.-+++ ....+. ....++-. ++..++++|..++.+.+..+.. ..+ ..+..+.++. +++.+.....+|..+
T Consensus 228 p~rG~~~~~-~~~~~~-~~~~~~~~~dg~~~~~~P~~~g~~~iG~t~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~p~~l 304 (501)
T 2qcu_A 228 LIKGSHIVV-PRVHTQ-KQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEI-NYLLNVYNTHFKKQL 304 (501)
T ss_dssp CEEEEEEEE-ECSSSC-SCEEEEECTTSCEEEEEEETTTEEEEECCCEECCSCGGGCCCCHHHH-HHHHHHHHHHBSSCC
T ss_pred cceeEEEEE-CCCCCC-ceEEEeecCCCCEEEEEEcCCCcEEEcCCCCCCCCCcCCCCCCHHHH-HHHHHHHHHhcCCCC
Confidence 222222222 222222 22222222 4456889998876433221110 001 1122233332 232222111111011
Q ss_pred HHHHHhhhhcCCeeeccCcc--cc-CCCCCCCcEEE--ecccCCCCCCCCCcchhHHHhhHHHHHHhccc
Q 040732 337 RDAFISKVEKGSIRTATNRS--MP-AAPKTTPGALL--LGDAFNMRHPLTGGGMTVALSDVVVLRNLIKP 401 (541)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~vvl--iGDAah~~~P~~GqG~~~al~Da~~La~~L~~ 401 (541)
.. ..+........|... .+ ......+.++. .+|..|.+...+|.|++.+-.=|..+++.+..
T Consensus 305 ~~---~~v~~~~aG~Rp~~~d~~p~~~~~~~~~~i~~~~~~~~~gl~~i~Gg~~t~~~~~Ae~~~~~~~~ 371 (501)
T 2qcu_A 305 SR---DDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTP 371 (501)
T ss_dssp CG---GGCCEEEEEEECCBCCCCSSGGGSCCCCEEEEEEETTEEEEEEEECCCGGGHHHHHHHHHHHHGG
T ss_pred Cc---ccEEEEEEEEeeecCCCCCccccCcCceEEEecccCCCCCeEEEeCccccchHHHHHHHHHHHHH
Confidence 00 000001111122211 11 11122344665 57777777888898988877666666665544
No 36
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.55 E-value=4.9e-14 Score=155.40 Aligned_cols=178 Identities=11% Similarity=0.093 Sum_probs=100.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeecccccccccccccc---CchhhHHHHHCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELL---QPGGYLKLVELG 140 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l---~~~~~~~l~~lg 140 (541)
...+||||||||++|+++|+.|+++|.+|+||||+.....+.+++....++.............. ...+.+.+++++
T Consensus 270 ~~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 349 (676)
T 3ps9_A 270 SSKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLP 349 (676)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHHHHCC
Confidence 34599999999999999999999999999999997655443444444333221100000000000 001222333332
Q ss_pred chhhHhhccceeeeeeEEEECC-------------------------eeeeecCCCCCCC---CCccceeecchHHHHHH
Q 040732 141 LDDCVEEIDAHPVVGYALFKDG-------------------------KITKTPYPLGNFQ---ANVAGRSFHNGRFIQRM 192 (541)
Q Consensus 141 l~~~~~~~~~~~~~g~~~~~~g-------------------------~~~~~~~~~~~~~---~~~~~~~~~r~~l~~~L 192 (541)
... .....|....... .......+..... ....+..++...+.+.|
T Consensus 350 ~~~------~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL 423 (676)
T 3ps9_A 350 VKF------DHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNV 423 (676)
T ss_dssp SCC------CEECCCEEEECCSHHHHHHHHHHHTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHH
T ss_pred CCc------CcCcCCeeeecCCHHHHHHHHHHHhcCCcHHHhhhCCHHHHHHhhCCCccCCcEEecCCeeeCHHHHHHHH
Confidence 110 0001111111000 0000000000000 00123456677899999
Q ss_pred HHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcCCCcEEEEEcCEEEEecCCCCc-ccccc
Q 040732 193 REKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFSN-LRRSL 253 (541)
Q Consensus 193 ~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~-vR~~l 253 (541)
.+.+++. |+++++++ |+++..+++. |.+.+.+|.+ +.||.||+|+|.+|. +....
T Consensus 424 ~~~a~~~-Gv~i~~~t~V~~l~~~~~~---v~V~t~~G~~--i~Ad~VVlAtG~~s~~l~~~~ 480 (676)
T 3ps9_A 424 LELAQQQ-GLQIYYQYQLQNFSRKDDC---WLLNFAGDQQ--ATHSVVVLANGHQISRFSQTS 480 (676)
T ss_dssp HHHHHHT-TCEEEESCCEEEEEEETTE---EEEEETTSCE--EEESEEEECCGGGGGCSTTTT
T ss_pred HHHHHhC-CCEEEeCCeeeEEEEeCCe---EEEEECCCCE--EECCEEEECCCcchhcccccc
Confidence 9999887 89999987 9999988875 4566677765 569999999999986 33333
No 37
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.55 E-value=9.7e-14 Score=141.91 Aligned_cols=180 Identities=14% Similarity=0.056 Sum_probs=100.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchh
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDD 143 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~ 143 (541)
+..+||+|||||++|+++|+.|+ +|.+|+|+|+.+....+.++++...++...-. .....+...+.+.++++. +
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~g~~as~~~~g~~~~~~~~---~~~~~l~~~~~~~~~~~~--~ 80 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQPGYHSTGRSAAHYTVAYGT---PQVRALTAASRAFFDNPP--A 80 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSSTTSSGGGSCCCEECSSSSC---HHHHHHHHHHHHHHHSCC--T
T ss_pred CCcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCccccccccccceeecccCC---HHHHHHHHHHHHHHHHhh--h
Confidence 35689999999999999999999 59999999998655444444444333221000 000001111222222221 0
Q ss_pred hHhhccceeeeeeEEEECCee-------------------------eeecCCCCCCC------CCccceeecchHHHHHH
Q 040732 144 CVEEIDAHPVVGYALFKDGKI-------------------------TKTPYPLGNFQ------ANVAGRSFHNGRFIQRM 192 (541)
Q Consensus 144 ~~~~~~~~~~~g~~~~~~g~~-------------------------~~~~~~~~~~~------~~~~~~~~~r~~l~~~L 192 (541)
.+.........|......... ....+|.-... ....+..++..++.+.|
T Consensus 81 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~l 160 (381)
T 3nyc_A 81 GFCEHPLLSPRPEMVVDFSDDPEELRRQYESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDALHQGY 160 (381)
T ss_dssp TSCSSCSEEECCEEEECSSCCHHHHHHHHHHHHHHCTTCEEECHHHHHHHSTTBCGGGCCCEEEETTCEEECHHHHHHHH
T ss_pred hhCCcccccccceEEEechHHHHHHHHHHHHHHHcCCCcEEeCHHHHHHhCCCcccccceEEEEcCCCceECHHHHHHHH
Confidence 000000011112111111100 00001100000 01112446778899999
Q ss_pred HHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcCCCcEEEEEcCEEEEecCCCC-cccccccCC
Q 040732 193 REKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFS-NLRRSLCNP 256 (541)
Q Consensus 193 ~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S-~vR~~l~~~ 256 (541)
.+.+++. |+++++++ |+++..+++. +.+++++| +++||.||.|+|.+| .+.+.++..
T Consensus 161 ~~~a~~~-Gv~i~~~~~V~~i~~~~~~---~~V~t~~g---~i~a~~VV~A~G~~s~~l~~~~g~~ 219 (381)
T 3nyc_A 161 LRGIRRN-QGQVLCNHEALEIRRVDGA---WEVRCDAG---SYRAAVLVNAAGAWCDAIAGLAGVR 219 (381)
T ss_dssp HHHHHHT-TCEEESSCCCCEEEEETTE---EEEECSSE---EEEESEEEECCGGGHHHHHHHHTCC
T ss_pred HHHHHHC-CCEEEcCCEEEEEEEeCCe---EEEEeCCC---EEEcCEEEECCChhHHHHHHHhCCC
Confidence 9999887 89999886 9999888774 45556666 366999999999998 455666543
No 38
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.54 E-value=2e-13 Score=146.86 Aligned_cols=74 Identities=20% Similarity=0.218 Sum_probs=61.7
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEc-CCCcEEEEEcCEEEEecCCCC-cccccccCC
Q 040732 182 SFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKT-KDGQEHKSYAPLTIVCDGGFS-NLRRSLCNP 256 (541)
Q Consensus 182 ~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~-~~g~~~~v~a~lvV~AdG~~S-~vR~~l~~~ 256 (541)
.++..++...|.+.+.+. |+++..++ |+++..+++++.+|++.+ .+|+..+++||.||+|+|.+| .+++.++..
T Consensus 166 ~vd~~~l~~~L~~~a~~~-G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~~ 242 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVAR-GAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSK 242 (561)
T ss_dssp ECCHHHHHHHHHHHHHHT-TCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTCC
T ss_pred eEcHHHHHHHHHHHHHHc-CCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCCC
Confidence 567788999999999887 89999887 999999888888898875 356666788999999999998 677777654
No 39
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.51 E-value=8.2e-14 Score=153.84 Aligned_cols=175 Identities=15% Similarity=0.110 Sum_probs=95.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeecccccccccccccc---CchhhHHHHHCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELL---QPGGYLKLVELG 140 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l---~~~~~~~l~~lg 140 (541)
...+||||||||++|+++|+.|+++|++|+||||+.....+.+++....++.............. ...+.+.++++-
T Consensus 262 ~~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~ 341 (689)
T 3pvc_A 262 TRCDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQPAQGASGNRQGALYPLLNGKNDALETFFTSAFTFARRQYDQLL 341 (689)
T ss_dssp SCCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSSTTCSGGGCSCEEECCCCCSSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCccccccccccCCEEecCCCCCChHHHHHHHHHHHHHHHHHHHhh
Confidence 35689999999999999999999999999999998655444444444333221100000000000 000111122110
Q ss_pred chhhHhhcc-ceeeeeeEEEECC-ee-------eeecC-----------------CCCCCC---CCccceeecchHHHHH
Q 040732 141 LDDCVEEID-AHPVVGYALFKDG-KI-------TKTPY-----------------PLGNFQ---ANVAGRSFHNGRFIQR 191 (541)
Q Consensus 141 l~~~~~~~~-~~~~~g~~~~~~g-~~-------~~~~~-----------------~~~~~~---~~~~~~~~~r~~l~~~ 191 (541)
. ..+. .....|....... .. ....+ +..... ....+..++..++.+.
T Consensus 342 --~--~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~a 417 (689)
T 3pvc_A 342 --E--QGIAFDHQWCGVSQLAFDDKSRGKIEKMLHTQWPVEFAEAMSREQLSELAGLDCAHDGIHYPAGGWLCPSDLTHA 417 (689)
T ss_dssp --H--TTCCCCEECCCEEEECCSHHHHHHHHHHTTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHH
T ss_pred --h--hccccccccCceEEeccCHHHHHHHHHHHhcCCChHHhhccCHHHHHHhcCCCcccceEEecCCeEECHHHHHHH
Confidence 0 0000 0001111111100 00 00000 000000 0012334667789999
Q ss_pred HHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcCCCc-EEEEEcCEEEEecCCCCc
Q 040732 192 MREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTKDGQ-EHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 192 L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~~g~-~~~v~a~lvV~AdG~~S~ 248 (541)
|.+.+.+. |+++++++ |+++..+++. |.+.+++|+ . +.||.||+|+|.+|.
T Consensus 418 L~~~a~~~-Gv~i~~~t~V~~l~~~~~~---v~V~t~~G~~~--i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 418 LMMLAQQN-GMTCHYQHELQRLKRIDSQ---WQLTFGQSQAA--KHHATVILATGHRLP 470 (689)
T ss_dssp HHHHHHHT-TCEEEESCCEEEEEECSSS---EEEEEC-CCCC--EEESEEEECCGGGTT
T ss_pred HHHHHHhC-CCEEEeCCeEeEEEEeCCe---EEEEeCCCcEE--EECCEEEECCCcchh
Confidence 99999887 89999987 9999887764 445566665 4 559999999999985
No 40
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.51 E-value=7.7e-13 Score=135.72 Aligned_cols=67 Identities=22% Similarity=0.210 Sum_probs=50.4
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcCCCcEEEEEcCEEEEecCCCCc-cccccc
Q 040732 181 RSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFSN-LRRSLC 254 (541)
Q Consensus 181 ~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~-vR~~l~ 254 (541)
..++..++.+.|.+.+++. |++++.++ |+++..+++. +.+++++| +++||.||+|+|.+|. +...++
T Consensus 145 ~~~~~~~~~~~l~~~~~~~-Gv~i~~~~~v~~i~~~~~~---~~v~~~~g---~~~a~~vV~A~G~~~~~l~~~~g 213 (389)
T 2gf3_A 145 GVLFSENCIRAYRELAEAR-GAKVLTHTRVEDFDISPDS---VKIETANG---SYTADKLIVSMGAWNSKLLSKLN 213 (389)
T ss_dssp EEEEHHHHHHHHHHHHHHT-TCEEECSCCEEEEEECSSC---EEEEETTE---EEEEEEEEECCGGGHHHHGGGGT
T ss_pred cEEeHHHHHHHHHHHHHHC-CCEEEcCcEEEEEEecCCe---EEEEeCCC---EEEeCEEEEecCccHHHHhhhhc
Confidence 3456678999999999887 89999986 9999876653 34555555 3669999999999875 444444
No 41
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.47 E-value=6.7e-13 Score=132.06 Aligned_cols=148 Identities=21% Similarity=0.222 Sum_probs=99.8
Q ss_pred CCCcEEEECCChHHHHHHHHHhhC--CCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCch
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTD--GRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLD 142 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~--G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~ 142 (541)
..+||+|||||++|+++|+.|+++ |.+|+|+|+.+........... ......+.+...+.|+++|+.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~-----------~~~~~~~~~~~~~~L~~~Gv~ 146 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQ-----------LFSAMVMRKPADVFLDEVGVP 146 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBT-----------TCCCEEEETTTHHHHHHHTCC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCc-----------cchhhhcchHHHHHHHHcCCc
Confidence 468999999999999999999997 9999999998744321100000 011112335556667766653
Q ss_pred hhHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeC-----
Q 040732 143 DCVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEEN----- 216 (541)
Q Consensus 143 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~----- 216 (541)
-. ..+.. ....+..++.+.|.+.+.+.++++++.++ ++++..++
T Consensus 147 ~~---------------~~G~~---------------~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~ 196 (344)
T 3jsk_A 147 YE---------------DEGDY---------------VVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAES 196 (344)
T ss_dssp CE---------------ECSSE---------------EEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----
T ss_pred cc---------------ccCCe---------------EEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccc
Confidence 10 00110 01123456889999999887799999997 89988655
Q ss_pred ------------C--eEEEEEEEc----CCC------cEEEEEcCEEEEecCCCCcccccc
Q 040732 217 ------------G--IVKGVHYKT----KDG------QEHKSYAPLTIVCDGGFSNLRRSL 253 (541)
Q Consensus 217 ------------~--~v~gV~v~~----~~g------~~~~v~a~lvV~AdG~~S~vR~~l 253 (541)
+ ++.||.+.. .+| +..+++|++||+|||..|.+++.+
T Consensus 197 ~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 197 SSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp ------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCHH
T ss_pred cccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHHH
Confidence 3 778887642 233 335688999999999999976654
No 42
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.46 E-value=2.5e-12 Score=132.51 Aligned_cols=68 Identities=18% Similarity=0.206 Sum_probs=52.1
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcCCCcEEEEEcCEEEEecCCCC-cccccccCC
Q 040732 182 SFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFS-NLRRSLCNP 256 (541)
Q Consensus 182 ~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S-~vR~~l~~~ 256 (541)
.++...+.+.|.+.+.+. ++++++++ |+++..+++. |.+.+.+| +++||.||+|+|.+| .+++.++..
T Consensus 149 ~~~~~~~~~~l~~~a~~~-Gv~i~~~~~V~~i~~~~~~---v~v~t~~g---~i~a~~VV~A~G~~s~~l~~~~g~~ 218 (397)
T 2oln_A 149 TIDVRGTLAALFTLAQAA-GATLRAGETVTELVPDADG---VSVTTDRG---TYRAGKVVLACGPYTNDLLEPLGAR 218 (397)
T ss_dssp EEEHHHHHHHHHHHHHHT-TCEEEESCCEEEEEEETTE---EEEEESSC---EEEEEEEEECCGGGHHHHHGGGTCC
T ss_pred EEcHHHHHHHHHHHHHHc-CCEEECCCEEEEEEEcCCe---EEEEECCC---EEEcCEEEEcCCcChHHHhhhcCCC
Confidence 456677889999988887 89999987 9999887764 44555555 366999999999994 577777643
No 43
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.45 E-value=2.6e-13 Score=146.43 Aligned_cols=69 Identities=16% Similarity=0.188 Sum_probs=58.8
Q ss_pred cchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeC-CeEEEEEEEcCCCcEEEEEcCEEEEecCCCCcccccc
Q 040732 184 HNGRFIQRMREKAASLPNVRMEEGT-VTSLFEEN-GIVKGVHYKTKDGQEHKSYAPLTIVCDGGFSNLRRSL 253 (541)
Q Consensus 184 ~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~-~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~vR~~l 253 (541)
....+.+.|.+.+++. +++++.++ |++++.++ +++.||.+.+.+|+..+++||.||+|+|++|..|+++
T Consensus 248 ~~~~l~~~L~~~~~~~-gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 248 SGPEIIDTLRKAAKEQ-GIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMNKEMI 318 (566)
T ss_dssp HHHHHHHHHHHHHHHT-TCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTCHHHH
T ss_pred CHHHHHHHHHHHHHhc-CCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccCHHHH
Confidence 4567889999999887 89999997 99998887 8899999877778766788999999999999886654
No 44
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.43 E-value=1.2e-12 Score=128.66 Aligned_cols=148 Identities=20% Similarity=0.191 Sum_probs=97.6
Q ss_pred CCCcEEEECCChHHHHHHHHHhhC-CCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchh
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTD-GRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDD 143 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~-G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~ 143 (541)
..+||+|||||++|+++|+.|+++ |.+|+|+||.+......... ... .....+.+...+.++++|+.-
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~-~~~----------~~~~~~~~~~~~~l~~~G~~~ 106 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLG-GQL----------FSAMIVRKPAHLFLDEIGVAY 106 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCC-STT----------CCCEEEETTTHHHHHHHTCCC
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecC-Ccc----------hHHHHcCcHHHHHHHHcCCCc
Confidence 458999999999999999999997 99999999987443210000 000 000112223344455444320
Q ss_pred hHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEE
Q 040732 144 CVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGV 222 (541)
Q Consensus 144 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV 222 (541)
...+. .....++..+...|.+.+.+..+++++.++ |+++..+++++.+|
T Consensus 107 ---------------~~~~~---------------~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv 156 (284)
T 1rp0_A 107 ---------------DEQDT---------------YVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGV 156 (284)
T ss_dssp ---------------EECSS---------------EEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEE
T ss_pred ---------------ccCCC---------------EEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEE
Confidence 00000 001125567888888888775699999997 99999888888888
Q ss_pred EEEc-----C--C---CcEEEEEcCEEEEecCCCCcccccc
Q 040732 223 HYKT-----K--D---GQEHKSYAPLTIVCDGGFSNLRRSL 253 (541)
Q Consensus 223 ~v~~-----~--~---g~~~~v~a~lvV~AdG~~S~vR~~l 253 (541)
.+.. . + |+..+++||.||+|+|.+|.++...
T Consensus 157 ~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 157 VTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp EEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHH
T ss_pred EEeccccccccCccccCceEEEECCEEEECCCCchHHHHHH
Confidence 7752 1 2 3445678999999999999887654
No 45
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.42 E-value=5.5e-13 Score=144.08 Aligned_cols=67 Identities=21% Similarity=0.286 Sum_probs=56.5
Q ss_pred chHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeC-CeEEEEEEEcCCCcEEEEEcCEEEEecCCCCccccc
Q 040732 185 NGRFIQRMREKAASLPNVRMEEGT-VTSLFEEN-GIVKGVHYKTKDGQEHKSYAPLTIVCDGGFSNLRRS 252 (541)
Q Consensus 185 r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~-~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~vR~~ 252 (541)
...+.+.|.+.+++. +++++.++ |++++.++ +++.||.+...+|+..++.||.||+|+|.+|..+++
T Consensus 254 g~~l~~~L~~~~~~~-gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n~~~ 322 (571)
T 1y0p_A 254 GAHVVQVLYDNAVKR-NIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAKNNER 322 (571)
T ss_dssp HHHHHHHHHHHHHHT-TCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHH
T ss_pred HHHHHHHHHHHHHhc-CCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcccCHHH
Confidence 356889999999887 89999997 99998876 889899987767876678899999999999986543
No 46
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.42 E-value=1.6e-11 Score=132.20 Aligned_cols=72 Identities=17% Similarity=0.160 Sum_probs=57.1
Q ss_pred ecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcC-CCcEEEEEcCEEEEecCCCC-cccccccC
Q 040732 183 FHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTK-DGQEHKSYAPLTIVCDGGFS-NLRRSLCN 255 (541)
Q Consensus 183 ~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~-~g~~~~v~a~lvV~AdG~~S-~vR~~l~~ 255 (541)
++..++...|.+.+.+. |+++..++ |+++..+++++.+|++.+. +|+..+++||.||+|+|.+| .+++..+.
T Consensus 185 v~~~~l~~~l~~~a~~~-Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~g~ 259 (571)
T 2rgh_A 185 NNDARLVIDNIKKAAED-GAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNFT 259 (571)
T ss_dssp CCHHHHHHHHHHHHHHT-TCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTCCS
T ss_pred EchHHHHHHHHHHHHHc-CCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhhcc
Confidence 56677888888888887 89999886 9999988888888888653 46555678999999999998 45555543
No 47
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.41 E-value=7.3e-12 Score=130.74 Aligned_cols=63 Identities=29% Similarity=0.344 Sum_probs=50.8
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEeC----eEEEeeeeCCeEEEEEEEcCCCcEEEEEcCEEEEecCCCCc
Q 040732 181 RSFHNGRFIQRMREKAASLPNVRMEEG----TVTSLFEENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 181 ~~~~r~~l~~~L~~~~~~~~~v~v~~~----~v~~l~~~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
..++...+.+.|.+.+++. |++++++ +|+++..+++++.||+ +.+|++ ++||.||+|+|.+|.
T Consensus 156 g~~~~~~~~~~L~~~a~~~-Gv~i~~~t~~~~V~~i~~~~~~v~gV~--t~~G~~--i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRM-GVKFVTGTPQGRVVTLIFENNDVKGAV--TADGKI--WRAERTFLCAGASAG 222 (438)
T ss_dssp EEECHHHHHHHHHHHHHHT-TCEEEESTTTTCEEEEEEETTEEEEEE--ETTTEE--EECSEEEECCGGGGG
T ss_pred EEecHHHHHHHHHHHHHhc-CCEEEeCCcCceEEEEEecCCeEEEEE--ECCCCE--EECCEEEECCCCChh
Confidence 3456668999999999887 8999987 5999998888766665 567754 569999999999985
No 48
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.37 E-value=8.1e-12 Score=118.77 Aligned_cols=132 Identities=26% Similarity=0.294 Sum_probs=90.0
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhh
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDC 144 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~ 144 (541)
.++||+|||||++|+.+|+.|++.|.+|+|+|+.... -|.... ...+. +... ..++
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~----~G~~~~----------~~~~~-~~~~--~~~~------- 57 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDA----VMMPFL----------PPKPP-FPPG--SLLE------- 57 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGG----TTCCSS----------CCCSC-CCTT--CHHH-------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCc----CCcccC----------ccccc-cchh--hHHh-------
Confidence 4689999999999999999999999999999997421 010000 00000 0000 0011
Q ss_pred HhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCeEEEeeeeCCeEEEEEE
Q 040732 145 VEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGTVTSLFEENGIVKGVHY 224 (541)
Q Consensus 145 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~v~~l~~~~~~v~gV~v 224 (541)
.++ + . . +. ++..+.+.|.+.+.+.++++++.++|+++..+++++.+|.
T Consensus 58 --~~~-----------d--------~-----~---g~--~~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~- 105 (232)
T 2cul_A 58 --RAY-----------D--------P-----K---DE--RVWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVR- 105 (232)
T ss_dssp --HHC-----------C--------T-----T---CC--CHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEE-
T ss_pred --hhc-----------c--------C-----C---CC--CHHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEE-
Confidence 100 0 0 0 00 5667889999999887789999767999988887765554
Q ss_pred EcCCCcEEEEEcCEEEEecCCCCcccccccC
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGFSNLRRSLCN 255 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~S~vR~~l~~ 255 (541)
+++|++ ++||.||.|+|.+|..+..++.
T Consensus 106 -~~~g~~--i~a~~VV~A~G~~s~~~~~~G~ 133 (232)
T 2cul_A 106 -TWEGPP--ARGEKVVLAVGSFLGARLFLGG 133 (232)
T ss_dssp -ETTSCC--EECSEEEECCTTCSSCEEEETT
T ss_pred -ECCCCE--EECCEEEECCCCChhhceecCC
Confidence 467764 5699999999999998876654
No 49
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.37 E-value=7.1e-12 Score=123.99 Aligned_cols=149 Identities=23% Similarity=0.231 Sum_probs=96.1
Q ss_pred CCCcEEEECCChHHHHHHHHHhhC--CCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCch
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTD--GRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLD 142 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~--G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~ 142 (541)
..+||+|||||++|+++|+.|+++ |.+|+|+|+.+........... ......+.+.....|+++|+.
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~-----------~~~~~~~~~~~~~~L~~~Gv~ 132 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQ-----------LFSAMVMRKPAHLFLQELEIP 132 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGG-----------GCCCEEEETTTHHHHHHTTCC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCc-----------ccchhhhhhHHHHHHHhhCcc
Confidence 457999999999999999999998 9999999998754321110000 001112334445666666643
Q ss_pred hhHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeee---C-C
Q 040732 143 DCVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEE---N-G 217 (541)
Q Consensus 143 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~---~-~ 217 (541)
-. ..+.. ....+...+...|++.+.+.++++++.++ |+++..+ + +
T Consensus 133 ~~---------------~~g~~---------------~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g 182 (326)
T 2gjc_A 133 YE---------------DEGDY---------------VVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKG 182 (326)
T ss_dssp CE---------------ECSSE---------------EEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC---
T ss_pred cc---------------cCCCe---------------EEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCC
Confidence 10 00110 01123456888999999888899999887 9999876 3 4
Q ss_pred --eEEEEEEEc----CCC------cEEEEEc---------------CEEEEecCCCCccccccc
Q 040732 218 --IVKGVHYKT----KDG------QEHKSYA---------------PLTIVCDGGFSNLRRSLC 254 (541)
Q Consensus 218 --~v~gV~v~~----~~g------~~~~v~a---------------~lvV~AdG~~S~vR~~l~ 254 (541)
++.||.+.. .+| ...++.| ++||+|||..|++.+.+.
T Consensus 183 ~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~ 246 (326)
T 2gjc_A 183 EVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCA 246 (326)
T ss_dssp --CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHHH
T ss_pred CcEEEEEEecceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHHHH
Confidence 788888742 233 3345678 999999999988877653
No 50
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.36 E-value=1.3e-12 Score=139.08 Aligned_cols=64 Identities=27% Similarity=0.351 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHcCCCeEEEeCe-EEEeeee-CCeEEEEEEEcCCCcEEEEEcC-EEEEecCCCCccccc
Q 040732 187 RFIQRMREKAASLPNVRMEEGT-VTSLFEE-NGIVKGVHYKTKDGQEHKSYAP-LTIVCDGGFSNLRRS 252 (541)
Q Consensus 187 ~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~-~~~v~gV~v~~~~g~~~~v~a~-lvV~AdG~~S~vR~~ 252 (541)
.+.+.|.+.+++. ++++++++ |++++.+ +++++||.+.. +|+..+++|+ .||.|+|.+|..+++
T Consensus 203 ~l~~~L~~~~~~~-Gv~i~~~t~v~~L~~~~~g~v~GV~~~~-~g~~~~i~A~k~VVlAtGG~~~n~~m 269 (510)
T 4at0_A 203 MLMKPLVETAEKL-GVRAEYDMRVQTLVTDDTGRVVGIVAKQ-YGKEVAVRARRGVVLATGSFAYNDKM 269 (510)
T ss_dssp HHHHHHHHHHHHT-TCEEECSEEEEEEEECTTCCEEEEEEEE-TTEEEEEEEEEEEEECCCCCTTCHHH
T ss_pred HHHHHHHHHHHHc-CCEEEecCEeEEEEECCCCcEEEEEEEE-CCcEEEEEeCCeEEEeCCChhhCHHH
Confidence 7889999999887 89999997 9999987 68899998865 4555678895 999999999964443
No 51
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.36 E-value=1e-12 Score=135.89 Aligned_cols=158 Identities=21% Similarity=0.280 Sum_probs=90.2
Q ss_pred CCCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCC---cCCcceeeeeccccccccccccccCchhhHHHHHC
Q 040732 63 SVAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDR---IDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVEL 139 (541)
Q Consensus 63 ~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~l 139 (541)
++.++||+|||||++|+++|+.|+++|.+|+|+|+.+..... +.+......+.. ..+...... ...-....+..+
T Consensus 24 ~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~-~~~~~~~~~-~~~~~~~~l~~~ 101 (417)
T 3v76_A 24 VAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIH-ASPRNFLSG-NPHFCKSALARY 101 (417)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETT-CSGGGEEES-STTTTHHHHHHS
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCC-CCHHHHhhc-CHHHHHHHHHhc
Confidence 346799999999999999999999999999999998754321 111111111100 000000000 001111233334
Q ss_pred CchhhHhhccceeeeeeEEEEC--CeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeC
Q 040732 140 GLDDCVEEIDAHPVVGYALFKD--GKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEEN 216 (541)
Q Consensus 140 gl~~~~~~~~~~~~~g~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~ 216 (541)
...+.+.-. ...|+..... +.. | .......+.+.|.+.+.+. +++++.++ |+++..++
T Consensus 102 ~~~~~~~~~---~~~Gi~~~~~~~g~~----~-----------~~~~~~~l~~~L~~~l~~~-Gv~i~~~~~V~~i~~~~ 162 (417)
T 3v76_A 102 RPQDFVALV---ERHGIGWHEKTLGQL----F-----------CDHSAKDIIRMLMAEMKEA-GVQLRLETSIGEVERTA 162 (417)
T ss_dssp CHHHHHHHH---HHTTCCEEECSTTEE----E-----------ESSCHHHHHHHHHHHHHHH-TCEEECSCCEEEEEEET
T ss_pred CHHHHHHHH---HHcCCCcEEeeCCEE----e-----------eCCCHHHHHHHHHHHHHHC-CCEEEECCEEEEEEEeC
Confidence 333222111 0011111111 110 0 1134457888899988877 89999987 99998877
Q ss_pred CeEEEEEEEcCCCcEEEEEcCEEEEecCCCC
Q 040732 217 GIVKGVHYKTKDGQEHKSYAPLTIVCDGGFS 247 (541)
Q Consensus 217 ~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S 247 (541)
+. +.+.+++| +++||.||+|+|.+|
T Consensus 163 ~~---~~V~~~~g---~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 163 SG---FRVTTSAG---TVDAASLVVASGGKS 187 (417)
T ss_dssp TE---EEEEETTE---EEEESEEEECCCCSS
T ss_pred CE---EEEEECCc---EEEeeEEEECCCCcc
Confidence 63 55666666 366999999999999
No 52
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.36 E-value=5.9e-11 Score=124.26 Aligned_cols=70 Identities=17% Similarity=0.175 Sum_probs=52.7
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeee---------------eCCeEEEEEEEcCCCcEEEE--EcCEEEEe
Q 040732 181 RSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFE---------------ENGIVKGVHYKTKDGQEHKS--YAPLTIVC 242 (541)
Q Consensus 181 ~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~---------------~~~~v~gV~v~~~~g~~~~v--~a~lvV~A 242 (541)
..++..++.+.|.+.+.+. |+++++++ |+++.. +++++.+|+ +++|+ + +||.||.|
T Consensus 176 ~~~~~~~l~~~L~~~~~~~-Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~--t~~g~---i~~~Ad~VV~A 249 (448)
T 3axb_A 176 GFLDAEKVVDYYYRRASGA-GVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAV--LSDGT---RVEVGEKLVVA 249 (448)
T ss_dssp EECCHHHHHHHHHHHHHHT-TCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEE--ETTSC---EEEEEEEEEEC
T ss_pred eEEcHHHHHHHHHHHHHhC-CCEEEcCCeEEEEEecccccccccccccccCCCceEEEE--eCCCE---EeecCCEEEEC
Confidence 3456678999999999887 89999976 999987 455444444 56663 5 69999999
Q ss_pred cCCCCc-ccccccCC
Q 040732 243 DGGFSN-LRRSLCNP 256 (541)
Q Consensus 243 dG~~S~-vR~~l~~~ 256 (541)
+|.+|. +.+.++..
T Consensus 250 tG~~s~~l~~~~g~~ 264 (448)
T 3axb_A 250 AGVWSNRLLNPLGID 264 (448)
T ss_dssp CGGGHHHHHGGGTCC
T ss_pred CCcCHHHHHHHcCCC
Confidence 999986 66666543
No 53
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.34 E-value=2.7e-11 Score=116.80 Aligned_cols=36 Identities=25% Similarity=0.566 Sum_probs=33.6
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQ 101 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~ 101 (541)
.+||+|||||||||++|+.|+++|++|+||||.+.+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 479999999999999999999999999999998744
No 54
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.33 E-value=5.1e-11 Score=126.51 Aligned_cols=63 Identities=16% Similarity=0.176 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcCCCcEEEEEcCEEEEecCCCCccccccc
Q 040732 187 RFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFSNLRRSLC 254 (541)
Q Consensus 187 ~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~vR~~l~ 254 (541)
.+.+.|.+.+++. |++|+.++ |+++..+++++++|+ ++||+++ .||.||.+.+.....++.+.
T Consensus 222 ~l~~aL~~~~~~~-Gg~I~~~~~V~~I~~~~~~~~gV~--~~~g~~~--~ad~VV~~a~~~~~~~~Ll~ 285 (501)
T 4dgk_A 222 ALVQGMIKLFQDL-GGEVVLNARVSHMETTGNKIEAVH--LEDGRRF--LTQAVASNADVVHTYRDLLS 285 (501)
T ss_dssp HHHHHHHHHHHHT-TCEEECSCCEEEEEEETTEEEEEE--ETTSCEE--ECSCEEECCC----------
T ss_pred chHHHHHHHHHHh-CCceeeecceeEEEeeCCeEEEEE--ecCCcEE--EcCEEEECCCHHHHHHHhcc
Confidence 4677788888887 88999998 999999999888776 5788865 49999998888877777664
No 55
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.31 E-value=6.6e-11 Score=120.23 Aligned_cols=37 Identities=35% Similarity=0.592 Sum_probs=34.3
Q ss_pred CCCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 63 SVAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 63 ~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
|+.++||+|||||++|+++|+.|+++|.+|+|+||..
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 3457899999999999999999999999999999976
No 56
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.31 E-value=6.1e-12 Score=131.75 Aligned_cols=166 Identities=20% Similarity=0.267 Sum_probs=93.7
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCC---cCCcceeeeeccccccc-cccccccCchh-hHHHHHC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDR---IDGRRVHVIERDLMEPN-RIVGELLQPGG-YLKLVEL 139 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~---~~~~~~~~~~~~~~~~~-~~~g~~l~~~~-~~~l~~l 139 (541)
.++||+|||||++|+++|+.|+++|.+|+|+||.+..... +.+......+....+.. ...+ ..+.. ...+...
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 102 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIP--GNGRFLYSAFSIF 102 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCT--BTGGGGHHHHHHS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhc--cChHHHHHHHHhc
Confidence 4589999999999999999999999999999998643210 00111111000000000 0000 00000 0111111
Q ss_pred CchhhHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceee----cchHHHHHHHHHHHcCCCeEEEeCe-EEEeee
Q 040732 140 GLDDCVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSF----HNGRFIQRMREKAASLPNVRMEEGT-VTSLFE 214 (541)
Q Consensus 140 gl~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~ 214 (541)
...+.+.- ....|+.+... ..+..+ ....+.+.|.+.+++. +++++.++ |+++..
T Consensus 103 ~~~~~~~~---~~~~G~~~~~~----------------~~g~~~p~~~~~~~l~~~L~~~~~~~-GV~i~~~~~V~~i~~ 162 (447)
T 2i0z_A 103 NNEDIITF---FENLGVKLKEE----------------DHGRMFPVSNKAQSVVDALLTRLKDL-GVKIRTNTPVETIEY 162 (447)
T ss_dssp CHHHHHHH---HHHTTCCEEEC----------------GGGEEEETTCCHHHHHHHHHHHHHHT-TCEEECSCCEEEEEE
T ss_pred CHHHHHHH---HHhcCCceEEe----------------eCCEEECCCCCHHHHHHHHHHHHHHC-CCEEEeCcEEEEEEe
Confidence 11111100 00011111100 011112 2356888999988886 89999987 999988
Q ss_pred eCCeEEEEEEEcCCCcEEEEEcCEEEEecCCCC-----------cccccccCC
Q 040732 215 ENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFS-----------NLRRSLCNP 256 (541)
Q Consensus 215 ~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S-----------~vR~~l~~~ 256 (541)
+++.+.+|+ .++|+. ++||.||+|||.+| .+++.++.+
T Consensus 163 ~~~~v~~V~--~~~G~~--i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~ 211 (447)
T 2i0z_A 163 ENGQTKAVI--LQTGEV--LETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHT 211 (447)
T ss_dssp ETTEEEEEE--ETTCCE--EECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCC
T ss_pred cCCcEEEEE--ECCCCE--EECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCC
Confidence 777766665 456753 66999999999999 677777654
No 57
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.29 E-value=3.1e-11 Score=129.03 Aligned_cols=157 Identities=18% Similarity=0.156 Sum_probs=97.2
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC-CCCCcCCcceeeeeccccccccccccccC-chhhHHHHHCC-c
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT-QPDRIDGRRVHVIERDLMEPNRIVGELLQ-PGGYLKLVELG-L 141 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~l~-~~~~~~l~~lg-l 141 (541)
..+||||||||+||+.+|+.|++.|.+|+|+|+... .... +.. ...| .+. ....+.++.+| .
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~--~Cn------------ps~G-Gia~g~lv~eldalgg~ 90 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQM--SCN------------PAIG-GIAKGIVVREIDALGGE 90 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCC--CSC------------SEEE-CTTHHHHHHHHHHHTCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCc--Ccc------------cccc-ccchHHHHHHHHHhhhH
Confidence 469999999999999999999999999999999741 2110 000 0000 011 11223334443 2
Q ss_pred hhhHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCeEEEeeeeCCeEEE
Q 040732 142 DDCVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGTVTSLFEENGIVKG 221 (541)
Q Consensus 142 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~v~~l~~~~~~v~g 221 (541)
+..... ..++.+..... . ...........+++..+.+.|.+.+.+.++++++.+.|+++..+++++.+
T Consensus 91 ~~~~~d-----~~gi~f~~l~~------~-kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~G 158 (637)
T 2zxi_A 91 MGKAID-----QTGIQFKMLNT------R-KGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVG 158 (637)
T ss_dssp HHHHHH-----HHEEEEEEEST------T-SCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEE
T ss_pred HHHHhh-----hcccceeeccc------c-cCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEE
Confidence 222111 01121111000 0 00000111235677889999999998867999987789999888887777
Q ss_pred EEEEcCCCcEEEEEcCEEEEecCCCCccccc
Q 040732 222 VHYKTKDGQEHKSYAPLTIVCDGGFSNLRRS 252 (541)
Q Consensus 222 V~v~~~~g~~~~v~a~lvV~AdG~~S~vR~~ 252 (541)
|. +.+|.. +.||.||+|||.++..+..
T Consensus 159 V~--t~dG~~--i~AdaVVLATG~~s~~~~~ 185 (637)
T 2zxi_A 159 VR--TNLGVE--YKTKAVVVTTGTFLNGVIY 185 (637)
T ss_dssp EE--ETTSCE--EECSEEEECCTTCBTCEEE
T ss_pred EE--ECCCcE--EEeCEEEEccCCCccCcee
Confidence 76 456764 5699999999999876654
No 58
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.29 E-value=2.8e-11 Score=129.79 Aligned_cols=160 Identities=18% Similarity=0.166 Sum_probs=97.9
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC-CCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCc-h
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT-QPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGL-D 142 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl-~ 142 (541)
..+||||||||+||+++|+.|++.|.+|+|||+.+. .... +.. ...+..-.....+.++.+|- .
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~--~Cn------------ps~ggia~~~lv~ei~algg~~ 92 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQM--SCN------------PAIGGIGKGHLVKEVDALGGLM 92 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCC--SSS------------SEEESTTHHHHHHHHHHTTCSH
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccc--ccc------------ccccchhhHHHHHHHHHhccHH
Confidence 469999999999999999999999999999999742 2110 000 00010001122233444432 1
Q ss_pred hhHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCeEEEeeeeCCeEEEE
Q 040732 143 DCVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGTVTSLFEENGIVKGV 222 (541)
Q Consensus 143 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~v~~l~~~~~~v~gV 222 (541)
..... ..++.+..-.. . ...........+++..+.+.|.+.+.+.+|++++.+.|+++..+++.+.+|
T Consensus 93 ~~~~d-----~~gi~f~~l~~------~-kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV 160 (651)
T 3ces_A 93 AKAID-----QAGIQFRILNA------S-KGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGA 160 (651)
T ss_dssp HHHHH-----HHEEEEEEEST------T-SCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEE
T ss_pred HHHhh-----hcccchhhhhc------c-cCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEE
Confidence 11111 01121111000 0 000001112357778899999999988669999877799998877877777
Q ss_pred EEEcCCCcEEEEEcCEEEEecCCCCccccccc
Q 040732 223 HYKTKDGQEHKSYAPLTIVCDGGFSNLRRSLC 254 (541)
Q Consensus 223 ~v~~~~g~~~~v~a~lvV~AdG~~S~vR~~l~ 254 (541)
. +.+|. ++.||.||+|||.+|..+...+
T Consensus 161 ~--t~dG~--~I~Ad~VVLATGt~s~~~~i~G 188 (651)
T 3ces_A 161 V--TQMGL--KFRAKAVVLTVGTFLDGKIHIG 188 (651)
T ss_dssp E--ETTSE--EEEEEEEEECCSTTTCCEEECC
T ss_pred E--ECCCC--EEECCEEEEcCCCCccCccccC
Confidence 6 45674 3669999999999998776543
No 59
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.28 E-value=3.6e-11 Score=130.10 Aligned_cols=69 Identities=14% Similarity=0.266 Sum_probs=57.7
Q ss_pred hHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEc-CCCcEEEEEcCEEEEecCCCCccccccc
Q 040732 186 GRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKT-KDGQEHKSYAPLTIVCDGGFSNLRRSLC 254 (541)
Q Consensus 186 ~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~-~~g~~~~v~a~lvV~AdG~~S~vR~~l~ 254 (541)
..+...|.+.+.+.++++++.++ |+++..+++++.||.+.+ .+|+..++.|+.||.|||++|.++....
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~~ 204 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNT 204 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSBS
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCcC
Confidence 36888999999888569999997 999998888888987764 6787667889999999999999876543
No 60
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.27 E-value=2.6e-11 Score=130.04 Aligned_cols=156 Identities=22% Similarity=0.217 Sum_probs=95.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC-CCCCcCCcceeeeeccccccccccccccCchhhHHHHHCC-c
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT-QPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELG-L 141 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lg-l 141 (541)
+..|||||||||+||+++|+.|++.|.+|+|+|+.+. .....-..+. .+.+ .....+.+..++ +
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~-----------gGia---~~~lv~el~al~g~ 84 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAI-----------GGVA---KGQITREIDALGGE 84 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEE-----------ECHH---HHHHHHHHHHHTCS
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccch-----------hhhh---HHHHHHHHHhcccH
Confidence 4569999999999999999999999999999999742 1110000000 0000 011112222222 1
Q ss_pred hhhHhhccceeeeeeEEE--ECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCeEEEeeeeCCeE
Q 040732 142 DDCVEEIDAHPVVGYALF--KDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGTVTSLFEENGIV 219 (541)
Q Consensus 142 ~~~~~~~~~~~~~g~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~v~~l~~~~~~v 219 (541)
...... ..++.+. ..... + ........+++..+...|.+.+.+.++++++.+.|+++..+++.+
T Consensus 85 ~~~~~d-----~~gi~f~~l~~~kg-----p----av~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V 150 (641)
T 3cp8_A 85 MGKAID-----ATGIQFRMLNRSKG-----P----AMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKF 150 (641)
T ss_dssp HHHHHH-----HHEEEEEEECSSSC-----T----TTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEE
T ss_pred HHHHHH-----hcCCchhhcccccC-----c----cccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEE
Confidence 111110 0122211 11110 0 001122457888899999999988789999888899998888877
Q ss_pred EEEEEEcCCCcEEEEEcCEEEEecCCCCcccc
Q 040732 220 KGVHYKTKDGQEHKSYAPLTIVCDGGFSNLRR 251 (541)
Q Consensus 220 ~gV~v~~~~g~~~~v~a~lvV~AdG~~S~vR~ 251 (541)
.||. +.+|+. +.||.||+|||.++..+.
T Consensus 151 ~GV~--t~~G~~--i~Ad~VVLATG~~s~~~i 178 (641)
T 3cp8_A 151 SSVT--VRSGRA--IQAKAAILACGTFLNGLI 178 (641)
T ss_dssp EEEE--ETTSCE--EEEEEEEECCTTCBTCEE
T ss_pred EEEE--ECCCcE--EEeCEEEECcCCCCCccc
Confidence 7766 456764 569999999999976543
No 61
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.25 E-value=2e-11 Score=131.71 Aligned_cols=68 Identities=19% Similarity=0.266 Sum_probs=56.3
Q ss_pred chHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeC-CeEEEEEEEcCCCcEEEEEcCEEEEecCCCCcccccc
Q 040732 185 NGRFIQRMREKAASLPNVRMEEGT-VTSLFEEN-GIVKGVHYKTKDGQEHKSYAPLTIVCDGGFSNLRRSL 253 (541)
Q Consensus 185 r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~-~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~vR~~l 253 (541)
...+.+.|.+.+++. +++++.++ |++++.++ +++.||.+.+.+|+..++.||.||.|+|.+|..++++
T Consensus 254 g~~l~~~L~~~~~~~-gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~ 323 (572)
T 1d4d_A 254 GAHVAQVLWDNAVKR-GTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKNNERV 323 (572)
T ss_dssp HHHHHHHHHHHHHHT-TCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHH
T ss_pred HHHHHHHHHHHHHHc-CCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccCHHHH
Confidence 456888999999887 89999997 99998776 8888999877678766788999999999999865543
No 62
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.24 E-value=6e-11 Score=126.19 Aligned_cols=61 Identities=25% Similarity=0.357 Sum_probs=49.4
Q ss_pred ecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcCCCcEEEEEcCEEEEecCCCCc
Q 040732 183 FHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 183 ~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
.....+.+.|++.+.+. ++++++++ |+++..+++++.+|+ +.+|++ +.||+||+|+|.+|.
T Consensus 217 ~~~~~l~~~L~~~l~~~-Gv~I~~~t~V~~I~~~~~~v~gV~--l~~G~~--i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 217 FKLVTMIEKMRATIIEL-GGEIRFSTRVDDLHMEDGQITGVT--LSNGEE--IKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHHHHHHHHT-TCEEESSCCEEEEEESSSBEEEEE--ETTSCE--EECSCEEECCCTTCH
T ss_pred chHHHHHHHHHHHHHhc-CCEEEeCCEEEEEEEeCCEEEEEE--ECCCCE--EECCEEEECCCCChh
Confidence 34567888899998887 89999997 999988877766665 467775 559999999999994
No 63
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.23 E-value=1.1e-10 Score=118.08 Aligned_cols=164 Identities=18% Similarity=0.229 Sum_probs=84.0
Q ss_pred CcEEEECCChHHHHHHHHHhhCC------CcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDG------RRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELG 140 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G------~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lg 140 (541)
+||+|||||++|+++|+.|+++| .+|+|+|+... ....++++...+...........-..+...+.+.++++.
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~-~~~aS~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT-PLTTTDVAAGLWQPYLSDPNNPQEADWSQQTFDYLLSHV 79 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG-GGSGGGTCCCBCCCCSSCCSCTHHHHHHHHHHHHHHTTT
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC-CCCccccCcceeecccCCCchHHHHHHHHHHHHHHHHHh
Confidence 48999999999999999999998 99999999862 222333333222110000000000001111222222221
Q ss_pred chhhHhhccceeeeeeEEEECCeee----------e------e-cCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeE
Q 040732 141 LDDCVEEIDAHPVVGYALFKDGKIT----------K------T-PYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVR 203 (541)
Q Consensus 141 l~~~~~~~~~~~~~g~~~~~~g~~~----------~------~-~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~ 203 (541)
-...-.........++.+..+.... . . .+|.........+..++..++.+.|.+.+++. |++
T Consensus 80 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~p~~~~~~~~~~~~v~p~~~~~~l~~~~~~~-Gv~ 158 (351)
T 3g3e_A 80 HSPNAENLGLFLISGYNLFHEAIPDPSWKDTVLGFRKLTPRELDMFPDYGYGWFHTSLILEGKNYLQWLTERLTER-GVK 158 (351)
T ss_dssp TSTTHHHHTEEEEEEEEEESSCCCCCGGGGTSEEEEECCHHHHTTCTTCCEEEEEEEEEECHHHHHHHHHHHHHHT-TCE
T ss_pred hccCCCCccEEEEEEEEEecCCccccCHHHhCCCceECCHHHhccCCCCceEEEecceEEcHHHHHHHHHHHHHHC-CCE
Confidence 1100001111122333332221100 0 0 01100000001135678888999999999887 788
Q ss_pred EEeCeEEEeeeeCCeEEEEEEEcCCCcEEEEEcCEEEEecCCCCc
Q 040732 204 MEEGTVTSLFEENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 204 v~~~~v~~l~~~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
+++.+|+++...+ . ++||.||+|+|.+|.
T Consensus 159 i~~~~V~~i~~~~-------------~---~~a~~VV~A~G~~s~ 187 (351)
T 3g3e_A 159 FFQRKVESFEEVA-------------R---EGADVIVNCTGVWAG 187 (351)
T ss_dssp EEECCCCCHHHHH-------------H---TTCSEEEECCGGGGG
T ss_pred EEEEEeCCHHHhh-------------c---CCCCEEEECCCcChH
Confidence 8774476654321 1 359999999999984
No 64
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.21 E-value=5.2e-11 Score=127.37 Aligned_cols=64 Identities=22% Similarity=0.240 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHcCCCeEEEeCe-EEEeee-eCC------eEEEEEEEc-CCCcEEEEEcCEEEEecCCCCccc
Q 040732 187 RFIQRMREKAASLPNVRMEEGT-VTSLFE-ENG------IVKGVHYKT-KDGQEHKSYAPLTIVCDGGFSNLR 250 (541)
Q Consensus 187 ~l~~~L~~~~~~~~~v~v~~~~-v~~l~~-~~~------~v~gV~v~~-~~g~~~~v~a~lvV~AdG~~S~vR 250 (541)
.+.+.|.+.+++.+++++++++ |++++. +++ ++.||.+.+ .+|+..++.|+.||.|+|.+|.+-
T Consensus 139 ~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~ 211 (540)
T 1chu_A 139 EVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVY 211 (540)
T ss_dssp ---CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGGS
T ss_pred HHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCccccc
Confidence 4677788888775699999998 999987 445 788998875 467766788999999999999763
No 65
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.20 E-value=8.5e-11 Score=121.39 Aligned_cols=106 Identities=14% Similarity=0.034 Sum_probs=63.0
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEeCe-EE---------EeeeeCCeEEEEEEEcCCCcEEEEEcCEEEEecCCCC-cc
Q 040732 181 RSFHNGRFIQRMREKAASLPNVRMEEGT-VT---------SLFEENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFS-NL 249 (541)
Q Consensus 181 ~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~---------~l~~~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S-~v 249 (541)
..++..++.+.|.+.+++. ++++++++ |+ ++..+++.+ .+.+.+| +++||.||+|+|.+| .+
T Consensus 167 g~v~~~~l~~~L~~~~~~~-Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v---~v~~~~g---~i~a~~VV~A~G~~s~~l 239 (405)
T 3c4n_A 167 LTYRPGSLALLAAQQAIGQ-GAGLLLNTRAELVPGGVRLHRLTVTNTHQ---IVVHETR---QIRAGVIIVAAGAAGPAL 239 (405)
T ss_dssp EEECHHHHHHHHHHHHHTT-TCEEECSCEEEEETTEEEEECBCC----------CBCCE---EEEEEEEEECCGGGHHHH
T ss_pred EEEcHHHHHHHHHHHHHHC-CCEEEcCCEEEeccccccccceEeeCCeE---EEEECCc---EEECCEEEECCCccHHHH
Confidence 3467788999999999887 89999886 88 777666543 3445555 367999999999998 67
Q ss_pred cc-cccCCCcccccceEEEEEeecCCCCCCeeEEEEcCCCcEEEEEccCC
Q 040732 250 RR-SLCNPKVDIPSCFVGMALENCQLPVPNHGHVVLTDPSPILFYPISSS 298 (541)
Q Consensus 250 R~-~l~~~~~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~ 298 (541)
++ .++...+..+ ..+..+. ...+......++. ...+++.|..++
T Consensus 240 ~~~~~g~~~~~~~--~~g~~~~-~~~~~~~~~~~~~--~~~~y~~p~~~g 284 (405)
T 3c4n_A 240 VEQGLGLHTRHGR--AYRQFPR-LDLLSGAQTPVLR--ASGLTLRPQNGG 284 (405)
T ss_dssp HHHHHCCCCCCEE--EEEECCE-ECSCCCTTCCEEE--ETTEEEEEETTE
T ss_pred HHHhcCCCCCccc--ceeEEEE-ECCCCccCCCeEE--CCcEEEEEcCCC
Confidence 77 7765433221 1122111 1112111112222 246788898776
No 66
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.20 E-value=2.8e-10 Score=119.62 Aligned_cols=77 Identities=16% Similarity=0.212 Sum_probs=48.2
Q ss_pred CCcEEEECCChHHHHHHHHHhhCC------CcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDG------RRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVEL 139 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G------~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~l 139 (541)
.+||+|||||++||++|+.|+++| ++|+|+|+.+.......+... ....++.....-....+...+.++++
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~---~g~~~d~G~~~~~~~~~~~~~l~~~l 81 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKK---DGYIIERGPDSFLERKKSAPQLVKDL 81 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECC---TTCCEESSCCCEETTCTHHHHHHHHT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEecc---CCEEeccChhhhhhCCHHHHHHHHHc
Confidence 479999999999999999999999 999999998644321111000 00000000000011245667888899
Q ss_pred CchhhH
Q 040732 140 GLDDCV 145 (541)
Q Consensus 140 gl~~~~ 145 (541)
|+.+.+
T Consensus 82 gl~~~~ 87 (470)
T 3i6d_A 82 GLEHLL 87 (470)
T ss_dssp TCCTTE
T ss_pred CCccee
Confidence 887544
No 67
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.19 E-value=8.2e-10 Score=114.54 Aligned_cols=59 Identities=20% Similarity=0.233 Sum_probs=46.1
Q ss_pred hHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcCCCcEEEEEcCEEEEecCCCCccc
Q 040732 186 GRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFSNLR 250 (541)
Q Consensus 186 ~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~vR 250 (541)
..+.+.|.+.+.+. |++++.++ |+++..+++++.+|+. +|++ ++||.||.|.|.+...+
T Consensus 196 ~~l~~~l~~~~~~~-G~~i~~~~~V~~i~~~~~~~~gv~~---~g~~--~~ad~VV~a~~~~~~~~ 255 (425)
T 3ka7_A 196 KGIIDALETVISAN-GGKIHTGQEVSKILIENGKAAGIIA---DDRI--HDADLVISNLGHAATAV 255 (425)
T ss_dssp HHHHHHHHHHHHHT-TCEEECSCCEEEEEEETTEEEEEEE---TTEE--EECSEEEECSCHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCEEEECCceeEEEEECCEEEEEEE---CCEE--EECCEEEECCCHHHHHH
Confidence 34777788888877 89999997 9999988888777764 3554 56999999999876543
No 68
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.19 E-value=1.4e-10 Score=125.60 Aligned_cols=62 Identities=21% Similarity=0.332 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEc-CCCcEEEEEcCEEEEecCCCCcc
Q 040732 187 RFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKT-KDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 187 ~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~-~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
.+...|.+.+.+. +++++.++ |++++.+++++.||.+.+ .+|+...+.|+.||.|+|+++.+
T Consensus 156 ~l~~~L~~~~~~~-gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 156 SLLHTLYGRSLRY-DTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHHHHTTS-CCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHhC-CCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 6888899988875 89999998 999998888999998865 67877778899999999999975
No 69
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.19 E-value=5.9e-11 Score=122.21 Aligned_cols=155 Identities=16% Similarity=0.211 Sum_probs=86.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCC---cCCcceeeeeccccccccccccccCchh-hHHHHHC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDR---IDGRRVHVIERDLMEPNRIVGELLQPGG-YLKLVEL 139 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~l~~~~-~~~l~~l 139 (541)
+.++||+|||||++|+++|+.|+++|.+|+|+||.+..... +.+....+.+... .+..... -.+.. ...+...
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~-~~~~~~~--~~~~~~~~~l~~~ 78 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEV-TPAHYLS--QNPHFVKSALARY 78 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSC-CGGGEEC--SCTTSTHHHHHHS
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCcc-CHHHhcc--CCHHHHHHHHHhC
Confidence 45689999999999999999999999999999998743220 1111111111000 0000000 00110 0112222
Q ss_pred CchhhHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceee---cchHHHHHHHHHHHcCCCeEEEeCe-EEEeeee
Q 040732 140 GLDDCVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSF---HNGRFIQRMREKAASLPNVRMEEGT-VTSLFEE 215 (541)
Q Consensus 140 gl~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~ 215 (541)
...+.+... ...|+.+.... .+..+ +...+.+.|.+.+++. +++++.++ |+++..+
T Consensus 79 ~~~~~~~~~---~~~Gi~~~~~~----------------~g~~~p~~~~~~l~~~L~~~~~~~-Gv~i~~~~~v~~i~~~ 138 (401)
T 2gqf_A 79 TNWDFISLV---AEQGITYHEKE----------------LGQLFCDEGAEQIVEMLKSECDKY-GAKILLRSEVSQVERI 138 (401)
T ss_dssp CHHHHHHHH---HHTTCCEEECS----------------TTEEEETTCTHHHHHHHHHHHHHH-TCEEECSCCEEEEEEC
T ss_pred CHHHHHHHH---HhCCCceEECc----------------CCEEccCCCHHHHHHHHHHHHHHC-CCEEEeCCEEEEEEcc
Confidence 221111100 00111111100 01111 4566888888888876 89999987 9998865
Q ss_pred ----CCeEEEEEEEcCCCcEEEEEcCEEEEecCCCC
Q 040732 216 ----NGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFS 247 (541)
Q Consensus 216 ----~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S 247 (541)
++. +.+.+++| +++||.||+|+|.+|
T Consensus 139 ~~g~~~~---~~v~~~~g---~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 139 QNDEKVR---FVLQVNST---QWQCKNLIVATGGLS 168 (401)
T ss_dssp CSCSSCC---EEEEETTE---EEEESEEEECCCCSS
T ss_pred cCcCCCe---EEEEECCC---EEECCEEEECCCCcc
Confidence 443 44555555 366999999999999
No 70
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.18 E-value=1.2e-10 Score=125.82 Aligned_cols=63 Identities=14% Similarity=0.198 Sum_probs=53.2
Q ss_pred hHHHHHHHHHHHcCCCeEEEeCe-EEEeeee-CCeEEEEEEEc-CCCcEEEEEcCEEEEecCCCCcc
Q 040732 186 GRFIQRMREKAASLPNVRMEEGT-VTSLFEE-NGIVKGVHYKT-KDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 186 ~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~-~~~v~gV~v~~-~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
..+.+.|.+.+.+. ++++++++ |+++..+ ++++.||.+.+ .+|+..++.|+.||.|+|++|..
T Consensus 143 ~~l~~~L~~~~~~~-gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 143 HALLHTLYQQNLKN-HTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRI 208 (588)
T ss_dssp HHHHHHHHHHHHHT-TCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhC-CCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccc
Confidence 46888899988887 89999998 9999876 67888998875 57876678899999999999864
No 71
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.18 E-value=1.3e-10 Score=105.66 Aligned_cols=117 Identities=22% Similarity=0.331 Sum_probs=83.5
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhHh
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCVE 146 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~~ 146 (541)
+||+|||||++|+.+|..|++.|.+|+|+|+.+.... +. ..+ .
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~------------------~~--~~~-----------------~ 44 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVK------------------GV--SRV-----------------P 44 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTT------------------TC--SCC-----------------C
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCccc------------------Cc--hhh-----------------h
Confidence 6899999999999999999999999999999862111 00 000 0
Q ss_pred hccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCeEEEeeeeCCeEEEEEEEc
Q 040732 147 EIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGTVTSLFEENGIVKGVHYKT 226 (541)
Q Consensus 147 ~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~v~~l~~~~~~v~gV~v~~ 226 (541)
.++. .+ ..+...++.+.+.+.+++. +++++.++|+++..+++. +.+.+
T Consensus 45 ---------------------~~~~--~~-----~~~~~~~~~~~l~~~~~~~-gv~v~~~~v~~i~~~~~~---~~v~~ 92 (180)
T 2ywl_A 45 ---------------------NYPG--LL-----DEPSGEELLRRLEAHARRY-GAEVRPGVVKGVRDMGGV---FEVET 92 (180)
T ss_dssp ---------------------CSTT--CT-----TCCCHHHHHHHHHHHHHHT-TCEEEECCCCEEEECSSS---EEEEC
T ss_pred ---------------------ccCC--Cc-----CCCCHHHHHHHHHHHHHHc-CCEEEeCEEEEEEEcCCE---EEEEE
Confidence 0000 00 0133456888888888887 799998888888776553 45556
Q ss_pred CCCcEEEEEcCEEEEecCCCCcccccccC
Q 040732 227 KDGQEHKSYAPLTIVCDGGFSNLRRSLCN 255 (541)
Q Consensus 227 ~~g~~~~v~a~lvV~AdG~~S~vR~~l~~ 255 (541)
++| ++.+|.||.|+|..+.+++.++.
T Consensus 93 ~~g---~i~ad~vI~A~G~~~~~~~~~g~ 118 (180)
T 2ywl_A 93 EEG---VEKAERLLLCTHKDPTLPSLLGL 118 (180)
T ss_dssp SSC---EEEEEEEEECCTTCCHHHHHHTC
T ss_pred CCC---EEEECEEEECCCCCCCccccCCC
Confidence 677 36699999999999988776654
No 72
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.15 E-value=6.3e-10 Score=115.41 Aligned_cols=59 Identities=17% Similarity=0.157 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcCCCcEEEEEcCEEEEecCCCCccccccc
Q 040732 187 RFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFSNLRRSLC 254 (541)
Q Consensus 187 ~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~vR~~l~ 254 (541)
.+.+.|.+.+.+. |++++.++ |+++..+++++ + ..+|++ +.||.||.|.|.+... +.++
T Consensus 190 ~l~~~l~~~~~~~-G~~i~~~~~V~~i~~~~~~v----V-~~~g~~--~~ad~Vv~a~~~~~~~-~ll~ 249 (421)
T 3nrn_A 190 AVIDELERIIMEN-KGKILTRKEVVEINIEEKKV----Y-TRDNEE--YSFDVAISNVGVRETV-KLIG 249 (421)
T ss_dssp HHHHHHHHHHHTT-TCEEESSCCEEEEETTTTEE----E-ETTCCE--EECSEEEECSCHHHHH-HHHC
T ss_pred HHHHHHHHHHHHC-CCEEEcCCeEEEEEEECCEE----E-EeCCcE--EEeCEEEECCCHHHHH-HhcC
Confidence 5667777888777 89999997 99998877754 3 345664 5599999999987654 3443
No 73
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.14 E-value=1.8e-10 Score=117.23 Aligned_cols=60 Identities=22% Similarity=0.226 Sum_probs=47.3
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcCCCcEEEEEcCEEEEecCCCCc
Q 040732 182 SFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 182 ~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
.++..++.+.|.+.+.+. +++++.++ |+++..+++. +.+++++|+ ++||.||.|+|.+|.
T Consensus 145 ~~~~~~l~~~l~~~~~~~-G~~i~~~~~V~~i~~~~~~---~~v~~~~g~---~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 145 FLRSELAIKTWIQLAKEA-GCAQLFNCPVTAIRHDDDG---VTIETADGE---YQAKKAIVCAGTWVK 205 (372)
T ss_dssp EEEHHHHHHHHHHHHHHT-TCEEECSCCEEEEEECSSS---EEEEESSCE---EEEEEEEECCGGGGG
T ss_pred EEcHHHHHHHHHHHHHHC-CCEEEcCCEEEEEEEcCCE---EEEEECCCe---EEcCEEEEcCCccHH
Confidence 456678999999999887 89999886 9999876654 445566663 569999999999874
No 74
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.13 E-value=3.4e-10 Score=123.33 Aligned_cols=62 Identities=16% Similarity=0.331 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEc-CCCcEEEEEcCEEEEecCCCCcc
Q 040732 187 RFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKT-KDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 187 ~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~-~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
.+...|.+.+.+. +++++.++ |++++.+++++.||.+.+ .+|+...+.|+.||.|+|+++.+
T Consensus 159 ~l~~~L~~~a~~~-gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 159 TMLFAVANECLKL-GVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHHHHHHHH-TCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHhC-CCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchhh
Confidence 5788888888776 89999998 999988888899998764 67877778899999999999865
No 75
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.13 E-value=4.5e-10 Score=113.11 Aligned_cols=34 Identities=26% Similarity=0.384 Sum_probs=31.9
Q ss_pred CcEEEECCChHHHHHHHHHhh---CCCcEEEEecCCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGT---DGRRVHVIERDMT 100 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~---~G~~V~viEr~~~ 100 (541)
+||+|||||++|+++|+.|++ +|++|+|+||...
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~ 38 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADD 38 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCC
Confidence 489999999999999999999 9999999999863
No 76
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.10 E-value=5.2e-10 Score=126.07 Aligned_cols=70 Identities=24% Similarity=0.298 Sum_probs=53.6
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcCCCcEEEEEcCEEEEecCCCCcc-cccccCC
Q 040732 181 RSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFSNL-RRSLCNP 256 (541)
Q Consensus 181 ~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~v-R~~l~~~ 256 (541)
..++..++.+.|.+.+++. |+++++++ |+++..+++.+.+|. +++| +++||.||+|+|.+|.. .+.++..
T Consensus 146 g~v~p~~l~~~L~~~a~~~-Gv~i~~~t~V~~i~~~~~~v~~V~--t~~G---~i~Ad~VV~AaG~~s~~l~~~~g~~ 217 (830)
T 1pj5_A 146 GLASAARAVQLLIKRTESA-GVTYRGSTTVTGIEQSGGRVTGVQ--TADG---VIPADIVVSCAGFWGAKIGAMIGMA 217 (830)
T ss_dssp EEECHHHHHHHHHHHHHHT-TCEEECSCCEEEEEEETTEEEEEE--ETTE---EEECSEEEECCGGGHHHHHHTTTCC
T ss_pred ceEcHHHHHHHHHHHHHHc-CCEEECCceEEEEEEeCCEEEEEE--ECCc---EEECCEEEECCccchHHHHHHhCCC
Confidence 3467778999999999887 89999887 999998877665554 4555 36799999999999853 3444443
No 77
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.09 E-value=5.1e-10 Score=110.78 Aligned_cols=114 Identities=18% Similarity=0.262 Sum_probs=75.0
Q ss_pred CCCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCch
Q 040732 63 SVAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLD 142 (541)
Q Consensus 63 ~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~ 142 (541)
.+++|||+||||||||+++|+.|+|.|++|+|+|+... . |. +.
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~--g---------------------g~-~~------------- 45 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTN--R---------------------NR-VT------------- 45 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC--G---------------------GG-GS-------------
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC--C---------------------Ce-ee-------------
Confidence 46779999999999999999999999999999998631 0 00 00
Q ss_pred hhHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCeEEEeeeeCCeEEEE
Q 040732 143 DCVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGTVTSLFEENGIVKGV 222 (541)
Q Consensus 143 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~v~~l~~~~~~v~gV 222 (541)
.. ..+ |+... .+...++.+..++.+.+.+++.+..++++.+...+... .
T Consensus 46 ---~~-----~~~-------------~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 94 (304)
T 4fk1_A 46 ---QN-----SHG-------------FITRD--------GIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGL--F 94 (304)
T ss_dssp ---SC-----BCC-------------STTCT--------TBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSC--E
T ss_pred ---ee-----cCC-------------ccCCC--------CCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCc--E
Confidence 00 000 00000 02233566666777777778888888877776554332 3
Q ss_pred EEEcCCCcEEEEEcCEEEEecCCC
Q 040732 223 HYKTKDGQEHKSYAPLTIVCDGGF 246 (541)
Q Consensus 223 ~v~~~~g~~~~v~a~lvV~AdG~~ 246 (541)
++.+.+|+++ .+|.||.|+|..
T Consensus 95 ~v~~~~g~~~--~a~~liiATGs~ 116 (304)
T 4fk1_A 95 EIVTKDHTKY--LAERVLLATGMQ 116 (304)
T ss_dssp EEEETTCCEE--EEEEEEECCCCE
T ss_pred EEEECCCCEE--EeCEEEEccCCc
Confidence 4556778764 499999999964
No 78
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.08 E-value=4.1e-10 Score=114.20 Aligned_cols=126 Identities=16% Similarity=0.159 Sum_probs=83.5
Q ss_pred CCCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCch
Q 040732 63 SVAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLD 142 (541)
Q Consensus 63 ~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~ 142 (541)
|+..+||+|||||++|+++|+.|++.|++|+|||+.+.... ... ..
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg-----------------------------~~~--~~--- 56 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGG-----------------------------QLA--AL--- 56 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCH-----------------------------HHH--HT---
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCC-----------------------------ccc--cc---
Confidence 45578999999999999999999999999999999752211 000 00
Q ss_pred hhHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEE
Q 040732 143 DCVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKG 221 (541)
Q Consensus 143 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~g 221 (541)
.. ... .+ .++ .. ..+++.++.+.|.+.+.+. +++++.++ |+++..+++. .
T Consensus 57 ---~~--~~~-----~~--------~~~--~~------~~~~~~~~~~~l~~~~~~~-~~~~~~~~~v~~i~~~~~~--~ 107 (360)
T 3ab1_A 57 ---YP--EKH-----IY--------DVA--GF------PEVPAIDLVESLWAQAERY-NPDVVLNETVTKYTKLDDG--T 107 (360)
T ss_dssp ---CT--TSE-----EC--------CST--TC------SSEEHHHHHHHHHHHHHTT-CCEEECSCCEEEEEECTTS--C
T ss_pred ---CC--Ccc-----cc--------cCC--CC------CCCCHHHHHHHHHHHHHHh-CCEEEcCCEEEEEEECCCc--e
Confidence 00 000 00 000 00 0145567888888888876 78888875 8888776442 2
Q ss_pred EEEEcCCCcEEEEEcCEEEEecCCCCcccccc
Q 040732 222 VHYKTKDGQEHKSYAPLTIVCDGGFSNLRRSL 253 (541)
Q Consensus 222 V~v~~~~g~~~~v~a~lvV~AdG~~S~vR~~l 253 (541)
+++.+.+|+. +.+|.||.|+|.+|..++.+
T Consensus 108 ~~v~~~~g~~--~~~~~li~AtG~~~~~~~~~ 137 (360)
T 3ab1_A 108 FETRTNTGNV--YRSRAVLIAAGLGAFEPRKL 137 (360)
T ss_dssp EEEEETTSCE--EEEEEEEECCTTCSCCBCCC
T ss_pred EEEEECCCcE--EEeeEEEEccCCCcCCCCCC
Confidence 3455677765 55999999999988665544
No 79
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.07 E-value=5.9e-10 Score=112.32 Aligned_cols=129 Identities=12% Similarity=0.123 Sum_probs=82.7
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
.+||+|||||++|+++|..|+++|++|+|+|+.+.....+ .. .++.+
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~----------------------~~-----------~~~~~ 49 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAW----------------------QH-----------AWHSL 49 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGG----------------------GG-----------SCTTC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcc----------------------cC-----------CCCCc
Confidence 4799999999999999999999999999999986332200 00 00000
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEE-
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVH- 223 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~- 223 (541)
.. ..... ...++....+ .......++..+.+.|.+.+++. +++++.++ |+++..+++. +.
T Consensus 50 ~~-----------~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~v~~i~~~~~~---~~~ 111 (357)
T 4a9w_A 50 HL-----------FSPAG--WSSIPGWPMP-ASQGPYPARAEVLAYLAQYEQKY-ALPVLRPIRVQRVSHFGER---LRV 111 (357)
T ss_dssp BC-----------SSCGG--GSCCSSSCCC-CCSSSSCBHHHHHHHHHHHHHHT-TCCEECSCCEEEEEEETTE---EEE
T ss_pred Ee-----------cCchh--hhhCCCCCCC-CCccCCCCHHHHHHHHHHHHHHc-CCEEEcCCEEEEEEECCCc---EEE
Confidence 00 00000 0000000000 01112245677888899888887 88898886 9999887774 44
Q ss_pred EEcCCCcEEEEEcCEEEEecCCCCc
Q 040732 224 YKTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 224 v~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
+.+++| ++.+|.||.|+|.+|.
T Consensus 112 v~~~~g---~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 112 VARDGR---QWLARAVISATGTWGE 133 (357)
T ss_dssp EETTSC---EEEEEEEEECCCSGGG
T ss_pred EEeCCC---EEEeCEEEECCCCCCC
Confidence 556666 3569999999998774
No 80
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.07 E-value=5.7e-10 Score=117.43 Aligned_cols=62 Identities=16% Similarity=0.195 Sum_probs=49.3
Q ss_pred hHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcCCCcEEEEEcCEEEEecCCCCccccc
Q 040732 186 GRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFSNLRRS 252 (541)
Q Consensus 186 ~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~vR~~ 252 (541)
..+.+.|.+.+++. +++++.++ | ++..+++++.||.+.+.+|+ +.||.||.|+|.+|.++..
T Consensus 119 ~~l~~~L~~~~~~~-gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~---~~a~~VVlAtGg~~~~~~~ 181 (472)
T 2e5v_A 119 REIFNFLLKLAREE-GIPIIEDRLV-EIRVKDGKVTGFVTEKRGLV---EDVDKLVLATGGYSYLYEY 181 (472)
T ss_dssp HHHHHHHHHHHHHT-TCCEECCCEE-EEEEETTEEEEEEETTTEEE---CCCSEEEECCCCCGGGSSS
T ss_pred HHHHHHHHHHHHhC-CCEEEECcEE-EEEEeCCEEEEEEEEeCCCe---EEeeeEEECCCCCcccCcc
Confidence 46778888888654 89999998 8 99888888888887554442 5599999999999987654
No 81
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.07 E-value=5e-10 Score=121.98 Aligned_cols=66 Identities=18% Similarity=0.191 Sum_probs=53.3
Q ss_pred cchHHHHHHHHHHHcC-CCeEEEeCe-EEEeeeeCC---eEEEEEEEc-CCCcEEEEEcCEEEEecCCCCcc
Q 040732 184 HNGRFIQRMREKAASL-PNVRMEEGT-VTSLFEENG---IVKGVHYKT-KDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 184 ~r~~l~~~L~~~~~~~-~~v~v~~~~-v~~l~~~~~---~v~gV~v~~-~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
+...+.+.|.+.+++. ++++++.++ |++++.+++ ++.||.+.+ .+|+...+.|+.||.|+|+++.+
T Consensus 164 ~G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~ 235 (662)
T 3gyx_A 164 NGESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVNV 235 (662)
T ss_dssp EETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccccc
Confidence 3445778888888775 489999987 999988766 899998765 57777778899999999999864
No 82
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.07 E-value=5.9e-10 Score=111.67 Aligned_cols=124 Identities=19% Similarity=0.230 Sum_probs=83.1
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhh
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDC 144 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~ 144 (541)
..+||+|||||++|+++|+.|++.|++|+|+|+.+.... .. . ..
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg-----------------------------~~-~-~~----- 47 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGG-----------------------------QL-T-AL----- 47 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCH-----------------------------HH-H-HT-----
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCC-----------------------------ee-e-cc-----
Confidence 458999999999999999999999999999999752211 00 0 00
Q ss_pred HhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEE
Q 040732 145 VEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVH 223 (541)
Q Consensus 145 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~ 223 (541)
..... ++ .++ ..+ .+.+.++.+.|.+.+.+. +++++.++ |+++..+++ .++
T Consensus 48 ---~~~~~-----~~--------~~~--~~~------~~~~~~~~~~l~~~~~~~-~~~~~~~~~v~~i~~~~~---~~~ 99 (335)
T 2zbw_A 48 ---YPEKY-----IY--------DVA--GFP------KVYAKDLVKGLVEQVAPF-NPVYSLGERAETLEREGD---LFK 99 (335)
T ss_dssp ---CTTSE-----EC--------CST--TCS------SEEHHHHHHHHHHHHGGG-CCEEEESCCEEEEEEETT---EEE
T ss_pred ---CCCce-----ee--------ccC--CCC------CCCHHHHHHHHHHHHHHc-CCEEEeCCEEEEEEECCC---EEE
Confidence 00000 00 000 000 144566888888888776 68887775 988887765 345
Q ss_pred EEcCCCcEEEEEcCEEEEecCCCCccccccc
Q 040732 224 YKTKDGQEHKSYAPLTIVCDGGFSNLRRSLC 254 (541)
Q Consensus 224 v~~~~g~~~~v~a~lvV~AdG~~S~vR~~l~ 254 (541)
+.+++|++ +.+|.||.|+|.+|...+...
T Consensus 100 v~~~~g~~--~~~~~lv~AtG~~~~~p~~~~ 128 (335)
T 2zbw_A 100 VTTSQGNA--YTAKAVIIAAGVGAFEPRRIG 128 (335)
T ss_dssp EEETTSCE--EEEEEEEECCTTSEEEECCCC
T ss_pred EEECCCCE--EEeCEEEECCCCCCCCCCCCC
Confidence 55667765 459999999999876555443
No 83
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.06 E-value=4.8e-09 Score=110.45 Aligned_cols=36 Identities=19% Similarity=0.307 Sum_probs=33.2
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCC--CcEEEEecCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDG--RRVHVIERDMT 100 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G--~~V~viEr~~~ 100 (541)
..+||+|||||++|+++|+.|+++| .+|+|+|+...
T Consensus 3 ~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~ 40 (475)
T 3lov_A 3 SSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGER 40 (475)
T ss_dssp CSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSS
T ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 3579999999999999999999999 99999999764
No 84
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.06 E-value=9e-10 Score=120.24 Aligned_cols=64 Identities=19% Similarity=0.171 Sum_probs=51.2
Q ss_pred hHHHHHHHHHHHcCCCe-EEEeCe-EEEeeeeCC---eEEEEEEEc-CCCcEEEEEcCEEEEecCCCCcc
Q 040732 186 GRFIQRMREKAASLPNV-RMEEGT-VTSLFEENG---IVKGVHYKT-KDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 186 ~~l~~~L~~~~~~~~~v-~v~~~~-v~~l~~~~~---~v~gV~v~~-~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
..+.+.|.+.+++.+++ +++.++ |++++.+++ ++.||.+.. .+|+...+.|+.||.|+|++|..
T Consensus 151 ~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~ 220 (643)
T 1jnr_A 151 ESYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLL 220 (643)
T ss_dssp TTHHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred HHHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccccc
Confidence 34677777777765478 899987 999988776 899998754 67776678899999999999864
No 85
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.03 E-value=1.3e-09 Score=106.85 Aligned_cols=113 Identities=21% Similarity=0.289 Sum_probs=81.4
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
.+||+|||||++|+++|..|+++|++|+|+|+.+.. . ... .
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~-~------------------~~~-----~--------------- 42 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERR-N------------------RFA-----S--------------- 42 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCG-G------------------GGC-----S---------------
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcc-c------------------ccc-----h---------------
Confidence 379999999999999999999999999999987411 0 000 0
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCeEEEeeeeCCeEEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGTVTSLFEENGIVKGVHYK 225 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~v~~l~~~~~~v~gV~v~ 225 (541)
. ...++.. ......++...+.+.+.+.+++++..++|+++..+++. +.+.
T Consensus 43 -----------------~--~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~---~~v~ 92 (297)
T 3fbs_A 43 -----------------H--SHGFLGQ--------DGKAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFGE---FIVE 92 (297)
T ss_dssp -----------------C--CCSSTTC--------TTCCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEETTE---EEEE
T ss_pred -----------------h--hcCCcCC--------CCCCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCCe---EEEE
Confidence 0 0001100 01334568888888888887899988889999887763 4556
Q ss_pred cCCCcEEEEEcCEEEEecCCCCcc
Q 040732 226 TKDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 226 ~~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
+++|++ +.+|.||.|+|..+..
T Consensus 93 ~~~g~~--~~~d~vviAtG~~~~~ 114 (297)
T 3fbs_A 93 IDGGRR--ETAGRLILAMGVTDEL 114 (297)
T ss_dssp ETTSCE--EEEEEEEECCCCEEEC
T ss_pred ECCCCE--EEcCEEEECCCCCCCC
Confidence 677775 4599999999987644
No 86
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.01 E-value=8.3e-10 Score=110.49 Aligned_cols=122 Identities=19% Similarity=0.234 Sum_probs=80.3
Q ss_pred CCCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCch
Q 040732 63 SVAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLD 142 (541)
Q Consensus 63 ~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~ 142 (541)
+...+||+|||||++|+++|+.|+++|++|+|+|+.+.... ...|. +...
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~------------------~~gg~-~~~~----------- 68 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGI------------------AAGGQ-LTTT----------- 68 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTB------------------CTTCG-GGGS-----------
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCC------------------CcCcc-cccc-----------
Confidence 34568999999999999999999999999999999752111 11110 0000
Q ss_pred hhHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCeEEEeeeeCCeEEEE
Q 040732 143 DCVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGTVTSLFEENGIVKGV 222 (541)
Q Consensus 143 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~v~~l~~~~~~v~gV 222 (541)
. . ...++. .+ ..+.+.++...|.+.+.+. +++++.++|+++..+++.+
T Consensus 69 ---~----------------~--~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~-gv~i~~~~v~~i~~~~~~~--- 116 (338)
T 3itj_A 69 ---T----------------E--IENFPG--FP-----DGLTGSELMDRMREQSTKF-GTEIITETVSKVDLSSKPF--- 116 (338)
T ss_dssp ---S----------------E--ECCSTT--CT-----TCEEHHHHHHHHHHHHHHT-TCEEECSCEEEEECSSSSE---
T ss_pred ---h----------------h--hcccCC--Cc-----ccCCHHHHHHHHHHHHHHc-CCEEEEeEEEEEEEcCCEE---
Confidence 0 0 000110 00 1245567888888888887 8999999988887766543
Q ss_pred EEEc---CCCcEEEEEcCEEEEecCCCCc
Q 040732 223 HYKT---KDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 223 ~v~~---~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
.+.. .++.. +.+|.||.|+|..+.
T Consensus 117 ~v~~~~~~~~~~--~~~d~vvlAtG~~~~ 143 (338)
T 3itj_A 117 KLWTEFNEDAEP--VTTDAIILATGASAK 143 (338)
T ss_dssp EEEETTCSSSCC--EEEEEEEECCCEEEC
T ss_pred EEEEEecCCCcE--EEeCEEEECcCCCcC
Confidence 3433 24444 459999999998654
No 87
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.00 E-value=2.3e-09 Score=106.19 Aligned_cols=115 Identities=19% Similarity=0.279 Sum_probs=79.7
Q ss_pred CcEEEECCChHHHHHHHHHhhCCC-cEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
+||+|||||++|+++|+.|++.|. +|+|+|+.. ... . ....
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-~gg------------------~----~~~~--------------- 43 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-PGG------------------Q----ITGS--------------- 43 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-TTC------------------G----GGGC---------------
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-CCc------------------c----cccc---------------
Confidence 699999999999999999999999 999999852 111 0 0000
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCeEEEeeeeCCeEEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGTVTSLFEENGIVKGVHYK 225 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~v~~l~~~~~~v~gV~v~ 225 (541)
... ..++. . ...+++..+.+.|.+.+.+. +++++.++|+++..+++. +++.
T Consensus 44 ----------------~~~--~~~~~--~-----~~~~~~~~~~~~l~~~~~~~-~v~~~~~~v~~i~~~~~~---~~v~ 94 (311)
T 2q0l_A 44 ----------------SEI--ENYPG--V-----KEVVSGLDFMQPWQEQCFRF-GLKHEMTAVQRVSKKDSH---FVIL 94 (311)
T ss_dssp ----------------SCB--CCSTT--C-----CSCBCHHHHHHHHHHHHHTT-SCEEECSCEEEEEEETTE---EEEE
T ss_pred ----------------ccc--ccCCC--C-----cccCCHHHHHHHHHHHHHHc-CCEEEEEEEEEEEEcCCE---EEEE
Confidence 000 00010 0 01255667888888888877 899888779998877663 4454
Q ss_pred cCCCcEEEEEcCEEEEecCCCCccc
Q 040732 226 TKDGQEHKSYAPLTIVCDGGFSNLR 250 (541)
Q Consensus 226 ~~~g~~~~v~a~lvV~AdG~~S~vR 250 (541)
..+|++ +.+|.||.|+|.++...
T Consensus 95 ~~~g~~--~~~~~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 95 AEDGKT--FEAKSVIIATGGSPKRT 117 (311)
T ss_dssp ETTSCE--EEEEEEEECCCEEECCC
T ss_pred EcCCCE--EECCEEEECCCCCCCCC
Confidence 567764 55999999999876543
No 88
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.97 E-value=2e-09 Score=112.51 Aligned_cols=66 Identities=23% Similarity=0.219 Sum_probs=47.2
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEc-CCCc-EEEEEcCEEEEecCCCCcc
Q 040732 182 SFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKT-KDGQ-EHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 182 ~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~-~~g~-~~~v~a~lvV~AdG~~S~v 249 (541)
..++..+.+.|.+.+.+. +..++.++ |+++..+++.+ .|++.+ .+|+ ..++.+|.||+|+|.+|.-
T Consensus 111 ~~~~~~l~~~l~~~~~~~-~~~i~~~t~V~~v~~~~~~~-~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p 179 (447)
T 2gv8_A 111 FPHRHTIQEYQRIYAQPL-LPFIKLATDVLDIEKKDGSW-VVTYKGTKAGSPISKDIFDAVSICNGHYEVP 179 (447)
T ss_dssp SCBHHHHHHHHHHHHGGG-GGGEECSEEEEEEEEETTEE-EEEEEESSTTCCEEEEEESEEEECCCSSSSB
T ss_pred CCCHHHHHHHHHHHHHHh-hCeEEeCCEEEEEEeCCCeE-EEEEeecCCCCeeEEEEeCEEEECCCCCCCC
Confidence 356778889998888776 66677776 99988776643 244433 2365 3456799999999998853
No 89
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.97 E-value=3e-09 Score=105.85 Aligned_cols=116 Identities=22% Similarity=0.254 Sum_probs=77.3
Q ss_pred CCCCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCc
Q 040732 62 ESVAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGL 141 (541)
Q Consensus 62 ~~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl 141 (541)
.|+..+||+|||||++|+++|+.|+++|++|+|+|+.. ... . .... .
T Consensus 12 ~m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg------------------~----~~~~---------~- 58 (319)
T 3cty_A 12 EKERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-AGG------------------L----TAEA---------P- 58 (319)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTG------------------G----GGGC---------S-
T ss_pred cccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-CCc------------------c----cccc---------c-
Confidence 35567899999999999999999999999999999852 111 0 0000 0
Q ss_pred hhhHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCeEEEeeeeCCeEEE
Q 040732 142 DDCVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGTVTSLFEENGIVKG 221 (541)
Q Consensus 142 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~v~~l~~~~~~v~g 221 (541)
.. ..++. + ..+++.++.+.+.+.+.+. +++++.++|+++..+++.
T Consensus 59 -----~~------------------~~~~~--~------~~~~~~~~~~~~~~~~~~~-~v~~~~~~v~~i~~~~~~--- 103 (319)
T 3cty_A 59 -----LV------------------ENYLG--F------KSIVGSELAKLFADHAANY-AKIREGVEVRSIKKTQGG--- 103 (319)
T ss_dssp -----CB------------------CCBTT--B------SSBCHHHHHHHHHHHHHTT-SEEEETCCEEEEEEETTE---
T ss_pred -----hh------------------hhcCC--C------cccCHHHHHHHHHHHHHHc-CCEEEEeeEEEEEEeCCE---
Confidence 00 00010 0 0134456778888888877 899988779998876663
Q ss_pred EEEEcCCCcEEEEEcCEEEEecCCCCc
Q 040732 222 VHYKTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 222 V~v~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
+++.+ ++.+ +.+|.||.|+|..+.
T Consensus 104 ~~v~~-~~~~--~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 104 FDIET-NDDT--YHAKYVIITTGTTHK 127 (319)
T ss_dssp EEEEE-SSSE--EEEEEEEECCCEEEC
T ss_pred EEEEE-CCCE--EEeCEEEECCCCCcc
Confidence 33434 4554 559999999997654
No 90
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.96 E-value=1.9e-09 Score=107.50 Aligned_cols=117 Identities=21% Similarity=0.287 Sum_probs=77.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchh
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDD 143 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~ 143 (541)
+..+||+|||||++|+++|..|+++|++|+|+|+.. ... .. ... +
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg------------------~~----~~~---------~--- 50 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM-PGG------------------QI----AWS---------E--- 50 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTG------------------GG----GGC---------S---
T ss_pred cccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC-CCc------------------cc----ccc---------c---
Confidence 456899999999999999999999999999999972 211 00 000 0
Q ss_pred hHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCeEEEeeee--CCeEEE
Q 040732 144 CVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGTVTSLFEE--NGIVKG 221 (541)
Q Consensus 144 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~v~~l~~~--~~~v~g 221 (541)
.. ..++ ..+ ..+++.++.+.+.+.+.+. +++++.++|+++..+ ++..
T Consensus 51 ---~~------------------~~~~--~~~-----~~~~~~~~~~~l~~~~~~~-gv~~~~~~v~~i~~~~~~~~~-- 99 (325)
T 2q7v_A 51 ---EV------------------ENFP--GFP-----EPIAGMELAQRMHQQAEKF-GAKVEMDEVQGVQHDATSHPY-- 99 (325)
T ss_dssp ---CB------------------CCST--TCS-----SCBCHHHHHHHHHHHHHHT-TCEEEECCEEEEEECTTSSSC--
T ss_pred ---cc------------------ccCC--CCC-----CCCCHHHHHHHHHHHHHHc-CCEEEeeeEEEEEeccCCCce--
Confidence 00 0000 000 0134566888888888877 888888778888765 3321
Q ss_pred EEEEcCCCcEEEEEcCEEEEecCCCCc
Q 040732 222 VHYKTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 222 V~v~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
+++...+|++ +.+|.||.|+|..+.
T Consensus 100 ~~v~~~~g~~--~~~~~vv~AtG~~~~ 124 (325)
T 2q7v_A 100 PFTVRGYNGE--YRAKAVILATGADPR 124 (325)
T ss_dssp CEEEEESSCE--EEEEEEEECCCEEEC
T ss_pred EEEEECCCCE--EEeCEEEECcCCCcC
Confidence 2233456664 559999999998653
No 91
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.94 E-value=4.7e-09 Score=104.14 Aligned_cols=113 Identities=19% Similarity=0.113 Sum_probs=77.6
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhh
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDC 144 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~ 144 (541)
..+||+|||||++|+++|+.|+++|++|+|+|+. ... .. ..
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg------------------~~-----~~-------------- 54 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGG------------------QL-----TE-------------- 54 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTG------------------GG-----GG--------------
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCC------------------ee-----cc--------------
Confidence 3589999999999999999999999999999997 211 00 00
Q ss_pred HhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCeEEEeeeeCCeEEEEEE
Q 040732 145 VEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGTVTSLFEENGIVKGVHY 224 (541)
Q Consensus 145 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~v~~l~~~~~~v~gV~v 224 (541)
.+. ...++. .. .....++.+.+.+.+.+. +++++..+|+++..+++. +.+
T Consensus 55 ----------------~~~--~~~~~~--~~------~~~~~~~~~~~~~~~~~~-~v~~~~~~v~~i~~~~~~---~~v 104 (323)
T 3f8d_A 55 ----------------AGI--VDDYLG--LI------EIQASDMIKVFNKHIEKY-EVPVLLDIVEKIENRGDE---FVV 104 (323)
T ss_dssp ----------------CCE--ECCSTT--ST------TEEHHHHHHHHHHHHHTT-TCCEEESCEEEEEEC--C---EEE
T ss_pred ----------------ccc--ccccCC--CC------CCCHHHHHHHHHHHHHHc-CCEEEEEEEEEEEecCCE---EEE
Confidence 000 000110 00 134456888888888877 888888779998876553 445
Q ss_pred EcCCCcEEEEEcCEEEEecCCCCc
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
.+++|+. +.+|.||.|+|....
T Consensus 105 ~~~~g~~--~~~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 105 KTKRKGE--FKADSVILGIGVKRR 126 (323)
T ss_dssp EESSSCE--EEEEEEEECCCCEEC
T ss_pred EECCCCE--EEcCEEEECcCCCCc
Confidence 5677765 459999999998743
No 92
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.93 E-value=5e-07 Score=94.43 Aligned_cols=56 Identities=20% Similarity=0.151 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHcCCCeEEEeCe-EEEeeee--CCeEEEEEEEcCCCcEEEEEcCEEEEecCCCCc
Q 040732 187 RFIQRMREKAASLPNVRMEEGT-VTSLFEE--NGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 187 ~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~--~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
.+.+.|.+.+++. |++++.++ |+++..+ ++++.+|+. +|++ +.||.||.|.|.++.
T Consensus 243 ~l~~al~~~~~~~-G~~i~~~~~V~~i~~~~~~~~~~~V~~---~g~~--~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 243 ELPQGFARLSAIY-GGTYMLDTPIDEVLYKKDTGKFEGVKT---KLGT--FKAPLVIADPTYFPE 301 (453)
T ss_dssp HHHHHHHHHHHHT-TCEEECSCCCCEEEEETTTTEEEEEEE---TTEE--EECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHc-CCEEECCCEEEEEEEECCCCeEEEEEE---CCeE--EECCEEEECCCccch
Confidence 5778888888777 78888887 9999887 777766653 4654 569999999999864
No 93
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.92 E-value=1.9e-08 Score=105.85 Aligned_cols=38 Identities=34% Similarity=0.583 Sum_probs=33.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQ 101 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~ 101 (541)
...+||+|||||++|+++|+.|+++|++|+|+|+....
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~ 51 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARL 51 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCC
Confidence 45689999999999999999999999999999998743
No 94
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.92 E-value=1.1e-09 Score=109.65 Aligned_cols=120 Identities=17% Similarity=0.186 Sum_probs=78.5
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhh
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDC 144 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~ 144 (541)
..+||+|||||++|+++|+.|++.|++|+|+|+...... ...|.....
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~------------------~~gg~~~~~-------------- 54 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDI------------------APGGQLTTT-------------- 54 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTB------------------CTTCGGGGC--------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCcccc------------------CCCceeeec--------------
Confidence 458999999999999999999999999999998321100 111100000
Q ss_pred HhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCeEEEeeeeCCeEEEEEE
Q 040732 145 VEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGTVTSLFEENGIVKGVHY 224 (541)
Q Consensus 145 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~v~~l~~~~~~v~gV~v 224 (541)
. . . ..++ .++ ..+++.++...|.+.+.+. +++++.++|+++..+++. +++
T Consensus 55 -----~-~-----~--------~~~~--~~~-----~~~~~~~~~~~l~~~~~~~-gv~~~~~~v~~i~~~~~~---~~v 104 (333)
T 1vdc_A 55 -----T-D-----V--------ENFP--GFP-----EGILGVELTDKFRKQSERF-GTTIFTETVTKVDFSSKP---FKL 104 (333)
T ss_dssp -----S-E-----E--------CCST--TCT-----TCEEHHHHHHHHHHHHHHT-TCEEECCCCCEEECSSSS---EEE
T ss_pred -----c-c-----c--------ccCC--CCc-----cCCCHHHHHHHHHHHHHHC-CCEEEEeEEEEEEEcCCE---EEE
Confidence 0 0 0 0011 000 1245567888888888776 899999888887765553 334
Q ss_pred EcCCCcEEEEEcCEEEEecCCCCcc
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
.+ +|.. +++|.||+|+|.++..
T Consensus 105 ~~-~~~~--~~~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 105 FT-DSKA--ILADAVILAIGAVAKR 126 (333)
T ss_dssp EC-SSEE--EEEEEEEECCCEEECC
T ss_pred EE-CCcE--EEcCEEEECCCCCcCC
Confidence 44 5544 5699999999987644
No 95
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.88 E-value=5e-09 Score=103.80 Aligned_cols=120 Identities=18% Similarity=0.269 Sum_probs=75.0
Q ss_pred CCCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCch
Q 040732 63 SVAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLD 142 (541)
Q Consensus 63 ~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~ 142 (541)
|.+.|||+||||||||+++|+.|++.|++|+|+|+...... . +++.
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~-----------------------~--~~G~--------- 46 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGV-----------------------A--AGGQ--------- 46 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGC-----------------------C--TTCG---------
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCc-----------------------c--cCCC---------
Confidence 44569999999999999999999999999999998742111 0 0000
Q ss_pred hhHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCeEEEeeeeCCeEEEE
Q 040732 143 DCVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGTVTSLFEENGIVKGV 222 (541)
Q Consensus 143 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~v~~l~~~~~~v~gV 222 (541)
+... .. + ..++ .++. .+...++...+.+.+.+. ++++...++.......+. .
T Consensus 47 --~~~~--~~-----i--------~~~~--g~~~-----~i~~~~l~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~---~ 98 (314)
T 4a5l_A 47 --LTTT--TI-----I--------ENFP--GFPN-----GIDGNELMMNMRTQSEKY-GTTIITETIDHVDFSTQP---F 98 (314)
T ss_dssp --GGGS--SE-----E--------CCST--TCTT-----CEEHHHHHHHHHHHHHHT-TCEEECCCEEEEECSSSS---E
T ss_pred --cCCh--HH-----h--------hhcc--CCcc-----cCCHHHHHHHHHHHHhhc-CcEEEEeEEEEeecCCCc---e
Confidence 0000 00 0 0011 0000 133356777778888777 788888777766655443 2
Q ss_pred EEEcCCCcEEEEEcCEEEEecCCC
Q 040732 223 HYKTKDGQEHKSYAPLTIVCDGGF 246 (541)
Q Consensus 223 ~v~~~~g~~~~v~a~lvV~AdG~~ 246 (541)
.+.+.++.+ +.+|.||.|+|..
T Consensus 99 ~~~~~~~~~--~~~~~liiATG~~ 120 (314)
T 4a5l_A 99 KLFTEEGKE--VLTKSVIIATGAT 120 (314)
T ss_dssp EEEETTCCE--EEEEEEEECCCEE
T ss_pred EEEECCCeE--EEEeEEEEccccc
Confidence 233456665 4599999999964
No 96
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.88 E-value=4.9e-09 Score=104.51 Aligned_cols=117 Identities=16% Similarity=0.176 Sum_probs=79.0
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
.+||+|||||++|+++|+.|+++|++|+|+|+.+.... . +...
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG----------------------~---------------~~~~ 49 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGG----------------------Q---------------LSAL 49 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCH----------------------H---------------HHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCc----------------------e---------------ehhc
Confidence 47999999999999999999999999999999863211 0 0000
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
.. ... . ..++ ..+ .+...++...|.+.+.+. +++++.++ |+++..+++. .+.+
T Consensus 50 ~~--~~~-----~--------~~~~--~~~------~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~i~~~~~~--~~~v 103 (332)
T 3lzw_A 50 YP--EKY-----I--------YDVA--GFP------KIRAQELINNLKEQMAKF-DQTICLEQAVESVEKQADG--VFKL 103 (332)
T ss_dssp CT--TSE-----E--------CCST--TCS------SEEHHHHHHHHHHHHTTS-CCEEECSCCEEEEEECTTS--CEEE
T ss_pred CC--Cce-----E--------eccC--CCC------CCCHHHHHHHHHHHHHHh-CCcEEccCEEEEEEECCCC--cEEE
Confidence 00 000 0 0011 000 134567888888888877 89998765 9998876542 2344
Q ss_pred EcCCCcEEEEEcCEEEEecCCCCc
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
.+.+|+ +.+|.||.|+|.++.
T Consensus 104 ~~~~g~---~~~d~vVlAtG~~~~ 124 (332)
T 3lzw_A 104 VTNEET---HYSKTVIITAGNGAF 124 (332)
T ss_dssp EESSEE---EEEEEEEECCTTSCC
T ss_pred EECCCE---EEeCEEEECCCCCcC
Confidence 556664 569999999999653
No 97
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.86 E-value=5.1e-09 Score=105.00 Aligned_cols=116 Identities=25% Similarity=0.307 Sum_probs=76.9
Q ss_pred CCCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCch
Q 040732 63 SVAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLD 142 (541)
Q Consensus 63 ~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~ 142 (541)
++..+||+|||||++|+++|..|++.|++|+|+|+.. ... ......
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg----------------------~~~~~~----------- 56 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-FGG----------------------ALMTTT----------- 56 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-CSC----------------------GGGSCS-----------
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCC----------------------ceeccc-----------
Confidence 4567899999999999999999999999999999652 111 000000
Q ss_pred hhHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCeEEEeeeeCCeEEEE
Q 040732 143 DCVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGTVTSLFEENGIVKGV 222 (541)
Q Consensus 143 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~v~~l~~~~~~v~gV 222 (541)
.. ..++. ++ ..+.+.++.+.|.+.+.+. +++++.++|+++.. ++. +
T Consensus 57 ----~~------------------~~~~~--~~-----~~~~~~~~~~~l~~~~~~~-~v~~~~~~v~~i~~-~~~---~ 102 (335)
T 2a87_A 57 ----DV------------------ENYPG--FR-----NGITGPELMDEMREQALRF-GADLRMEDVESVSL-HGP---L 102 (335)
T ss_dssp ----CB------------------CCSTT--CT-----TCBCHHHHHHHHHHHHHHT-TCEEECCCEEEEEC-SSS---S
T ss_pred ----hh------------------hhcCC--CC-----CCCCHHHHHHHHHHHHHHc-CCEEEEeeEEEEEe-CCc---E
Confidence 00 00010 00 1144556778888878776 89999988887766 332 2
Q ss_pred EE-EcCCCcEEEEEcCEEEEecCCCCc
Q 040732 223 HY-KTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 223 ~v-~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
++ .+++|++ +.+|.||.|+|..+.
T Consensus 103 ~v~~~~~g~~--~~~d~lviAtG~~~~ 127 (335)
T 2a87_A 103 KSVVTADGQT--HRARAVILAMGAAAR 127 (335)
T ss_dssp EEEEETTSCE--EEEEEEEECCCEEEC
T ss_pred EEEEeCCCCE--EEeCEEEECCCCCcc
Confidence 23 3566765 459999999998654
No 98
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.86 E-value=4.2e-09 Score=104.65 Aligned_cols=114 Identities=16% Similarity=0.206 Sum_probs=75.6
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhh
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDC 144 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~ 144 (541)
..+||+|||||++|+++|+.|++.|++|+|+|+.. ... .....
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg----------------------~~~~~-------------- 46 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGME-KGG----------------------QLTTT-------------- 46 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-TTG----------------------GGGGC--------------
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-CCc----------------------eEecc--------------
Confidence 45899999999999999999999999999999642 111 00000
Q ss_pred HhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCeEEEeeeeCCeEEEEEE
Q 040732 145 VEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGTVTSLFEENGIVKGVHY 224 (541)
Q Consensus 145 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~v~~l~~~~~~v~gV~v 224 (541)
. .. ..++ .++ ..+.+..+.+.+.+.+.+. +++++.++++++..+++.+ ++
T Consensus 47 --~----~~-------------~~~~--~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~i~~~~~~~---~v 96 (320)
T 1trb_A 47 --T----EV-------------ENWP--GDP-----NDLTGPLLMERMHEHATKF-ETEIIFDHINKVDLQNRPF---RL 96 (320)
T ss_dssp --S----BC-------------CCST--TCC-----SSCBHHHHHHHHHHHHHHT-TCEEECCCEEEEECSSSSE---EE
T ss_pred --h----hh-------------hhCC--CCC-----CCCCHHHHHHHHHHHHHHC-CCEEEEeeeeEEEecCCEE---EE
Confidence 0 00 0000 000 1134456777788777776 8999999888887655533 33
Q ss_pred EcCCCcEEEEEcCEEEEecCCCCc
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
..+|.. +.+|.||.|+|..+.
T Consensus 97 -~~~~~~--~~~~~lv~AtG~~~~ 117 (320)
T 1trb_A 97 -NGDNGE--YTCDALIIATGASAR 117 (320)
T ss_dssp -EESSCE--EEEEEEEECCCEEEC
T ss_pred -EeCCCE--EEcCEEEECCCCCcC
Confidence 345654 459999999998654
No 99
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.84 E-value=1.2e-08 Score=109.22 Aligned_cols=141 Identities=21% Similarity=0.144 Sum_probs=81.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchh
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDD 143 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~ 143 (541)
+.++||+|||||++|+++|+.|++.|++|+|+|+.+........+ ..-+..+..... +..+...+
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~-------------~~pg~~~d~~~~--~~~~~f~~ 78 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWN-------------RYPGARCDIESI--EYCYSFSE 78 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHC-------------CCTTCBCSSCTT--TSSCCSCH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccc-------------CCCceeeccccc--ccccccCh
Confidence 346899999999999999999999999999999986432200000 000000000000 00000000
Q ss_pred hHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCC-CeEEEeCe-EEEeeeeCC-eEE
Q 040732 144 CVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLP-NVRMEEGT-VTSLFEENG-IVK 220 (541)
Q Consensus 144 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~v~v~~~~-v~~l~~~~~-~v~ 220 (541)
... ..+. ......++.++.+.|...+.+.+ ++.++.++ |+++..+++ .
T Consensus 79 ~~~--------------------~~~~-------~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~-- 129 (542)
T 1w4x_A 79 EVL--------------------QEWN-------WTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATN-- 129 (542)
T ss_dssp HHH--------------------HHCC-------CCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTT--
T ss_pred hhh--------------------hccC-------cccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCC--
Confidence 000 0000 00112456678888887777663 35677776 888876543 2
Q ss_pred EEEEEcCCCcEEEEEcCEEEEecCCCCccc
Q 040732 221 GVHYKTKDGQEHKSYAPLTIVCDGGFSNLR 250 (541)
Q Consensus 221 gV~v~~~~g~~~~v~a~lvV~AdG~~S~vR 250 (541)
.+++.+++|++ ++||.||+|+|.+|.-+
T Consensus 130 ~w~V~~~~G~~--~~ad~vV~AtG~~s~p~ 157 (542)
T 1w4x_A 130 TWTVDTNHGDR--IRARYLIMASGQLSVPQ 157 (542)
T ss_dssp EEEEEETTCCE--EEEEEEEECCCSCCCCC
T ss_pred eEEEEECCCCE--EEeCEEEECcCCCCCCC
Confidence 24455677865 55999999999987543
No 100
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.84 E-value=7.6e-09 Score=110.51 Aligned_cols=137 Identities=15% Similarity=0.139 Sum_probs=83.3
Q ss_pred CCCcEEEECCChHHHHHHHHHh-hCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchh
Q 040732 65 AGPDVIVVGAGVAGAALAHTLG-TDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDD 143 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La-~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~ 143 (541)
.++||+|||||++|+++|+.|+ +.|++|+|+|+.+........+ +. -|+
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~-------------~y---------------pg~-- 56 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWN-------------RY---------------PGA-- 56 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHC-------------CC---------------TTC--
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCccccc-------------CC---------------CCc--
Confidence 4589999999999999999999 9999999999986332100000 00 000
Q ss_pred hHhhccceeeeeeEEEECCeeeeecCCCCC---CCCCccceeecchHHHHHHHHHHHcCCCe--EEEeCe-EEEeeeeCC
Q 040732 144 CVEEIDAHPVVGYALFKDGKITKTPYPLGN---FQANVAGRSFHNGRFIQRMREKAASLPNV--RMEEGT-VTSLFEENG 217 (541)
Q Consensus 144 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~r~~l~~~L~~~~~~~~~v--~v~~~~-v~~l~~~~~ 217 (541)
....... ...+.... ..........++.++.+.|.+.+.+. ++ .++.++ |+++..+++
T Consensus 57 -------------~~d~~s~--~~~~~~~~~~~~~~~~~~~~~~~~ei~~~l~~~~~~~-g~~~~i~~~~~V~~i~~~~~ 120 (540)
T 3gwf_A 57 -------------LSDTESH--LYRFSFDRDLLQESTWKTTYITQPEILEYLEDVVDRF-DLRRHFKFGTEVTSALYLDD 120 (540)
T ss_dssp -------------EEEEEGG--GSSCCSCHHHHHHCCCSBSEEEHHHHHHHHHHHHHHT-TCGGGEEESCCEEEEEEETT
T ss_pred -------------eecCCcc--eeeeccccccccCCCCcccCCCHHHHHHHHHHHHHHc-CCcceeEeccEEEEEEEeCC
Confidence 0000000 00000000 00001122356778888898888887 66 677776 888876654
Q ss_pred eEEEEEEEcCCCcEEEEEcCEEEEecCCCCccc
Q 040732 218 IVKGVHYKTKDGQEHKSYAPLTIVCDGGFSNLR 250 (541)
Q Consensus 218 ~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~vR 250 (541)
.. .+++.+++|++ +.||.||.|+|.+|.-+
T Consensus 121 ~~-~~~V~~~~G~~--i~ad~lV~AtG~~s~p~ 150 (540)
T 3gwf_A 121 EN-LWEVTTDHGEV--YRAKYVVNAVGLLSAIN 150 (540)
T ss_dssp TT-EEEEEETTSCE--EEEEEEEECCCSCCSBC
T ss_pred CC-EEEEEEcCCCE--EEeCEEEECCcccccCC
Confidence 10 24555678875 45999999999987543
No 101
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.80 E-value=1.2e-08 Score=100.94 Aligned_cols=113 Identities=20% Similarity=0.251 Sum_probs=75.1
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
++||+||||||+|+++|..|++.|.+|+|+|+.. .. .... ..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~--gG----------------------~~~~--------~~------ 42 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERF--GG----------------------QILD--------TV------ 42 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSST--TG----------------------GGGG--------CC------
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC--Cc----------------------eecc--------cc------
Confidence 4799999999999999999999999999998542 00 0000 00
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeC-eEEEeeeeC--CeEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEG-TVTSLFEEN--GIVKGV 222 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~-~v~~l~~~~--~~v~gV 222 (541)
++ . .+.. ....++..+.+.+.+.+.+. +++++.+ +|+.+..+. +. .+
T Consensus 43 ---------~~---~-------~~~~--------~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~v~~i~~~~~~~~--~~ 92 (310)
T 1fl2_A 43 ---------DI---E-------NYIS--------VPKTEGQKLAGALKVHVDEY-DVDVIDSQSASKLIPAAVEGG--LH 92 (310)
T ss_dssp ---------EE---C-------CBTT--------BSSEEHHHHHHHHHHHHHTS-CEEEECSCCEEEEECCSSTTC--CE
T ss_pred ---------cc---c-------cccC--------cCCCCHHHHHHHHHHHHHHc-CCeEEccCEEEEEEecccCCc--eE
Confidence 00 0 0000 00133456778888888776 8999999 588886542 11 23
Q ss_pred EEEcCCCcEEEEEcCEEEEecCCCCc
Q 040732 223 HYKTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 223 ~v~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
.+..++|++ +.+|.||.|+|..+.
T Consensus 93 ~v~~~~g~~--~~~~~lv~AtG~~~~ 116 (310)
T 1fl2_A 93 QIETASGAV--LKARSIIVATGAKWR 116 (310)
T ss_dssp EEEETTSCE--EEEEEEEECCCEEEC
T ss_pred EEEECCCCE--EEeCEEEECcCCCcC
Confidence 444667765 459999999998654
No 102
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.80 E-value=2.1e-08 Score=101.69 Aligned_cols=138 Identities=18% Similarity=0.224 Sum_probs=78.0
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhh
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDC 144 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~ 144 (541)
.+||+|||||++|+++|..|++.|. +|+|||+.+ ... ....+. .. ...+.+... ....|+.+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg-----~~~~~~-------~~-~~~~~~~~~--~~~~g~~~~ 67 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGH-----SFKHWP-------KS-TRTITPSFT--SNGFGMPDM 67 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTH-----HHHTSC-------TT-CBCSSCCCC--CGGGTCCCT
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCC-----ccccCc-------cc-ccccCcchh--cccCCchhh
Confidence 5899999999999999999999999 999999985 211 000000 00 000000000 000010000
Q ss_pred HhhccceeeeeeEEEECCeeeeecCCCCCCCC-CccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEE
Q 040732 145 VEEIDAHPVVGYALFKDGKITKTPYPLGNFQA-NVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGV 222 (541)
Q Consensus 145 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV 222 (541)
.. .. + ...+. ......+++..+...+.+.+++. +++++.++ |+++..+++. +
T Consensus 68 -----------------~~---~~-~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-gv~i~~~~~v~~i~~~~~~---~ 121 (369)
T 3d1c_A 68 -----------------NA---IS-M-DTSPAFTFNEEHISGETYAEYLQVVANHY-ELNIFENTVVTNISADDAY---Y 121 (369)
T ss_dssp -----------------TC---SS-T-TCCHHHHHCCSSCBHHHHHHHHHHHHHHT-TCEEECSCCEEEEEECSSS---E
T ss_pred -----------------hh---cc-c-cccccccccccCCCHHHHHHHHHHHHHHc-CCeEEeCCEEEEEEECCCe---E
Confidence 00 00 0 00000 00001244456777788777776 89999886 8888876543 3
Q ss_pred EEEcCCCcEEEEEcCEEEEecCCCCc
Q 040732 223 HYKTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 223 ~v~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
.+.+.+|+ +.+|.||.|+|.++.
T Consensus 122 ~v~~~~g~---~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 122 TIATTTET---YHADYIFVATGDYNF 144 (369)
T ss_dssp EEEESSCC---EEEEEEEECCCSTTS
T ss_pred EEEeCCCE---EEeCEEEECCCCCCc
Confidence 44455553 559999999999763
No 103
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.78 E-value=2.9e-08 Score=104.12 Aligned_cols=65 Identities=18% Similarity=0.205 Sum_probs=45.4
Q ss_pred ecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeee--CCeEEEEEEEcCC--CcEEEEEcCEEEEecCCCCc
Q 040732 183 FHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEE--NGIVKGVHYKTKD--GQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 183 ~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~--~~~v~gV~v~~~~--g~~~~v~a~lvV~AdG~~S~ 248 (541)
..+..+.+.|...+.+. ++.++.++ |+++..+ +++...+++.+.+ |+..++.+|.||.|+|....
T Consensus 124 ~~~~~~~~~l~~~~~~~-~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~p~ 193 (463)
T 3s5w_A 124 PCRMEFNDYLRWVASHF-QEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGTPR 193 (463)
T ss_dssp CBHHHHHHHHHHHHTTC-TTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCCEEC
T ss_pred CCHHHHHHHHHHHHHHc-CCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCCCCC
Confidence 35667888888888777 67888887 8888765 2444444554443 55556779999999997443
No 104
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.78 E-value=1.3e-08 Score=109.01 Aligned_cols=140 Identities=21% Similarity=0.233 Sum_probs=81.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchh
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDD 143 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~ 143 (541)
+..+||+|||||++|+++|+.|++.|++|+|||+.+.... +.... +.-|... .+..
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG-----tw~~~--------~ypg~~~-----------dv~s 74 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGG-----VWYWN--------RYPGARC-----------DVES 74 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT-----HHHHC--------CCTTCBC-----------SSCT
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCC-----ccccC--------CCCCcee-----------CCCc
Confidence 3468999999999999999999999999999999863321 00000 0000000 0000
Q ss_pred hHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCe--EEEeCe-EEEeeeeCCeEE
Q 040732 144 CVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNV--RMEEGT-VTSLFEENGIVK 220 (541)
Q Consensus 144 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v--~v~~~~-v~~l~~~~~~v~ 220 (541)
.... +. . .......+ .......++.++.+.|.+.+.+. ++ .++.++ |+++..+++..
T Consensus 75 ~~y~--------~~--f-~~~~~~~~-------~~~~~~~~~~ei~~yl~~~~~~~-g~~~~i~~~~~V~~i~~~~~~~- 134 (549)
T 4ap3_A 75 IDYS--------YS--F-SPELEQEW-------NWSEKYATQPEILAYLEHVADRF-DLRRDIRFDTRVTSAVLDEEGL- 134 (549)
T ss_dssp TTSS--------CC--S-CHHHHHHC-------CCSSSSCBHHHHHHHHHHHHHHT-TCGGGEECSCCEEEEEEETTTT-
T ss_pred hhcc--------cc--c-ccccccCC-------CCccCCCCHHHHHHHHHHHHHHc-CCCccEEECCEEEEEEEcCCCC-
Confidence 0000 00 0 00000000 00112345677888888888877 55 677775 99887655311
Q ss_pred EEEEEcCCCcEEEEEcCEEEEecCCCCcc
Q 040732 221 GVHYKTKDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 221 gV~v~~~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
.+++.+++|++ +.||.||.|+|..|.-
T Consensus 135 ~w~V~~~~G~~--i~ad~lV~AtG~~s~p 161 (549)
T 4ap3_A 135 RWTVRTDRGDE--VSARFLVVAAGPLSNA 161 (549)
T ss_dssp EEEEEETTCCE--EEEEEEEECCCSEEEC
T ss_pred EEEEEECCCCE--EEeCEEEECcCCCCCC
Confidence 24455678875 4599999999987643
No 105
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.76 E-value=5.6e-08 Score=101.99 Aligned_cols=67 Identities=13% Similarity=0.101 Sum_probs=46.9
Q ss_pred ecchHHHHHHHHHHHcCCCeE--EEeCe-EEEeeeeCC-eEEEEEEEc-CCCcEEEEEcCEEEEecCCCCccc
Q 040732 183 FHNGRFIQRMREKAASLPNVR--MEEGT-VTSLFEENG-IVKGVHYKT-KDGQEHKSYAPLTIVCDGGFSNLR 250 (541)
Q Consensus 183 ~~r~~l~~~L~~~~~~~~~v~--v~~~~-v~~l~~~~~-~v~gV~v~~-~~g~~~~v~a~lvV~AdG~~S~vR 250 (541)
.++..+.+.|.+.+++. ++. ++.++ |+++..+++ ....|++.. .+|+..++.+|.||+|+|.+|.-+
T Consensus 98 ~~~~~l~~~l~~~~~~~-gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 98 PPREVLWDYIKGRVEKA-GVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp CBHHHHHHHHHHHHHHH-TCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCCSSSSBC
T ss_pred CCHHHHHHHHHHHHHHc-CCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCCCCCCCc
Confidence 56778888888888776 666 77776 888887654 122355543 245445577999999999877554
No 106
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.74 E-value=2.1e-07 Score=96.40 Aligned_cols=34 Identities=35% Similarity=0.549 Sum_probs=32.2
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
+||||||||++|+++|+.|+++|.+|+|+|++..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~ 35 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGER 35 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCC
Confidence 6999999999999999999999999999999763
No 107
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.74 E-value=4.5e-08 Score=97.87 Aligned_cols=118 Identities=21% Similarity=0.200 Sum_probs=70.1
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCC--cCCcceeeeecccccccccccc-ccCchh--hHHHHHCCc
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDR--IDGRRVHVIERDLMEPNRIVGE-LLQPGG--YLKLVELGL 141 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~-~l~~~~--~~~l~~lgl 141 (541)
+||+|||||+||+.+|+.|+++|.+|+|+|+++..... ..++...+ .+++...|. .+..-| .+.++.+|-
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~h~~d~i~eL-----~CnpSigG~~~~~akGlL~~EIdaLGg 76 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAHGTDRFAEI-----VCSNSLGGEGETNAKGLLQAEMRRAGS 76 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSSCCSSCTTCC-----CSCCEEEECSTTCHHHHHHHHHHHHTC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCccccCCCcccc-----ccCcCCCccccccchhHHHHHHHHcCC
Confidence 69999999999999999999999999999998743221 11111110 000011111 111222 122333332
Q ss_pred h-hhHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCeEEEee
Q 040732 142 D-DCVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGTVTSLF 213 (541)
Q Consensus 142 ~-~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~v~~l~ 213 (541)
. -.... .. + + | ......++|..|.+.+.+.+.++|++++++++|+++.
T Consensus 77 ~m~~~aD--~~---~-----------i--p------Ag~al~vDR~~f~~~~~~~le~~pni~l~q~eV~~l~ 125 (443)
T 3g5s_A 77 LVMEAAD--LA---R-----------V--P------AGGALAVDREEFSGYITERLTGHPLLEVVREEVREIP 125 (443)
T ss_dssp HHHHHHH--HS---E-----------E--C------CTTEEEECHHHHHHHHHHHHHTCTTEEEECSCCCSCC
T ss_pred hHhhhhh--hc---C-----------C--C------CCccccCCcHHHHHHHHHHHHcCCCeEEEhhhhhhhc
Confidence 1 11100 00 0 0 1 0112359999999999999999999999998877764
No 108
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.73 E-value=3.7e-08 Score=102.56 Aligned_cols=56 Identities=16% Similarity=0.173 Sum_probs=43.0
Q ss_pred hHHHHHHHHHHHcCCCeEEEeCe-EEEeee-eCCeEEEEEEEcCCCcEEEEEcCEEEEecCCC
Q 040732 186 GRFIQRMREKAASLPNVRMEEGT-VTSLFE-ENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGF 246 (541)
Q Consensus 186 ~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~-~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~ 246 (541)
+++.+.|.+.+++. |++++.++ |+++.. +++++.+|+ +++|+. +.||.||.+.|..
T Consensus 256 ~~L~~aL~r~~~~~-Gg~i~l~t~V~~I~~d~~g~v~gV~--~~~G~~--i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAIN-GGTFMLNKNVVDFVFDDDNKVCGIK--SSDGEI--AYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC---CEESSCCEEEEEECTTSCEEEEE--ETTSCE--EEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHc-CCEEEeCCeEEEEEEecCCeEEEEE--ECCCcE--EECCEEEECCCcc
Confidence 35777888888887 88999887 999987 677777776 467775 4599999999987
No 109
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.73 E-value=1.1e-08 Score=107.99 Aligned_cols=36 Identities=25% Similarity=0.333 Sum_probs=33.4
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
+.++||+||||||+|+++|+.|++.|.+|+|+|+.+
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 38 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRG 38 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 446899999999999999999999999999999965
No 110
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.71 E-value=3.2e-08 Score=105.40 Aligned_cols=115 Identities=19% Similarity=0.265 Sum_probs=76.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchh
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDD 143 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~ 143 (541)
+..+||+||||||+|+++|+.|++.|++|+|+|+.. .. .... ..++.
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~--GG----------------------~~~~--------~~~~~- 256 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF--GG----------------------QVLD--------TVDIE- 256 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSST--TG----------------------GGTT--------CSCBC-
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCC--CC----------------------cccc--------ccccc-
Confidence 457899999999999999999999999999998642 10 0000 00000
Q ss_pred hHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeC--CeEE
Q 040732 144 CVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEEN--GIVK 220 (541)
Q Consensus 144 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~--~~v~ 220 (541)
.+.. . ......++...|.+.+.+. +++++.++ |+++..+. +.
T Consensus 257 ------------------------~~~~--~------~~~~~~~l~~~l~~~~~~~-gv~v~~~~~v~~i~~~~~~~~-- 301 (521)
T 1hyu_A 257 ------------------------NYIS--V------PKTEGQKLAGALKAHVSDY-DVDVIDSQSASKLVPAATEGG-- 301 (521)
T ss_dssp ------------------------CBTT--B------SSBCHHHHHHHHHHHHHTS-CEEEECSCCEEEEECCSSTTS--
T ss_pred ------------------------ccCC--C------CCCCHHHHHHHHHHHHHHc-CCEEEcCCEEEEEEeccCCCc--
Confidence 0000 0 0133456788888888877 89999994 88886431 21
Q ss_pred EEEEEcCCCcEEEEEcCEEEEecCCCCc
Q 040732 221 GVHYKTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 221 gV~v~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
.+++.+++|+. +.+|.||.|+|.++.
T Consensus 302 ~~~V~~~~g~~--~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 302 LHQIETASGAV--LKARSIIIATGAKWR 327 (521)
T ss_dssp CEEEEETTSCE--EEEEEEEECCCEEEC
T ss_pred eEEEEECCCCE--EEcCEEEECCCCCcC
Confidence 23444667765 459999999997653
No 111
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.71 E-value=2.2e-08 Score=106.98 Aligned_cols=139 Identities=17% Similarity=0.098 Sum_probs=80.0
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhh
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDC 144 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~ 144 (541)
..+||||||||++|+++|+.|++.|++|+|||+.+..... ... ++.-|... .....
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGt-----w~~--------~~yPg~~~-----------d~~~~ 63 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGT-----WYW--------NRYPGCRL-----------DTESY 63 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTH-----HHH--------CCCTTCBC-----------SSCHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCc-----ccc--------CCCCceee-----------cCchh
Confidence 4689999999999999999999999999999998633220 000 00000000 00000
Q ss_pred HhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCe--EEEeCe-EEEeeeeCCeEEE
Q 040732 145 VEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNV--RMEEGT-VTSLFEENGIVKG 221 (541)
Q Consensus 145 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v--~v~~~~-v~~l~~~~~~v~g 221 (541)
.... . .... ... ..........+.++...+.+.+.+. ++ .++.++ |+++..+++.. .
T Consensus 64 ~y~~--------~--f~~~------~~~--~~~~~~~~~~~~ei~~yl~~~~~~~-~l~~~i~~~~~V~~~~~~~~~~-~ 123 (545)
T 3uox_A 64 AYGY--------F--ALKG------IIP--EWEWSENFASQPEMLRYVNRAADAM-DVRKHYRFNTRVTAARYVENDR-L 123 (545)
T ss_dssp HHCH--------H--HHTT------SST--TCCCSBSSCBHHHHHHHHHHHHHHH-TCGGGEECSCCEEEEEEEGGGT-E
T ss_pred hccc--------c--cCcc------ccc--CCCccccCCCHHHHHHHHHHHHHHc-CCcCcEEECCEEEEEEEeCCCC-E
Confidence 0000 0 0000 000 0001112345667888888877766 44 566665 88887554210 2
Q ss_pred EEEEcCCCcEEEEEcCEEEEecCCCCcc
Q 040732 222 VHYKTKDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 222 V~v~~~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
+++.+++|++ +.||.||.|+|..|.-
T Consensus 124 w~V~~~~G~~--~~ad~lV~AtG~~s~p 149 (545)
T 3uox_A 124 WEVTLDNEEV--VTCRFLISATGPLSAS 149 (545)
T ss_dssp EEEEETTTEE--EEEEEEEECCCSCBC-
T ss_pred EEEEECCCCE--EEeCEEEECcCCCCCC
Confidence 4555677865 5599999999987743
No 112
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.71 E-value=4.8e-08 Score=96.71 Aligned_cols=34 Identities=29% Similarity=0.396 Sum_probs=32.4
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERD 98 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~ 98 (541)
.+|||+||||||||+++|+.|++.|++|+|+||.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~ 38 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG 38 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC
Confidence 3699999999999999999999999999999986
No 113
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.71 E-value=2e-08 Score=105.44 Aligned_cols=36 Identities=31% Similarity=0.280 Sum_probs=33.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
+.++||+|||||++|+++|..|++.|.+|+||||.+
T Consensus 2 ~~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~ 37 (466)
T 3l8k_A 2 SLKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKG 37 (466)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTS
T ss_pred CccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 346899999999999999999999999999999875
No 114
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.70 E-value=1.9e-08 Score=105.63 Aligned_cols=143 Identities=15% Similarity=0.091 Sum_probs=78.6
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCc---hhhHHHHHCCch
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQP---GGYLKLVELGLD 142 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~---~~~~~l~~lgl~ 142 (541)
++||+||||||+|+++|..|++.|.+|+|+|+.. ... ..++. .....+...++.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~-~gG----------------------~~~~~g~~psk~ll~~~~~~ 59 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY-WGG----------------------VCLNVGCIPSKALLRNAELV 59 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC-TTH----------------------HHHHHSHHHHHHHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC-CCC----------------------cccccCchhhHHHHHHHHHH
Confidence 4799999999999999999999999999999972 211 01111 112223333333
Q ss_pred hhHh-hccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCeEEEeeeeCCeEEE
Q 040732 143 DCVE-EIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGTVTSLFEENGIVKG 221 (541)
Q Consensus 143 ~~~~-~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~v~~l~~~~~~v~g 221 (541)
+.+. ... ..++. ... ...++ .... ..... ...+.+.+.+.+++. +++++.++.+.+ +++ .
T Consensus 60 ~~~~~~~~---~~g~~--~~~---~~~~~--~~~~-~~~~~--~~~l~~~l~~~~~~~-gv~~~~g~~~~i--d~~---~ 120 (464)
T 2a8x_A 60 HIFTKDAK---AFGIS--GEV---TFDYG--IAYD-RSRKV--AEGRVAGVHFLMKKN-KITEIHGYGTFA--DAN---T 120 (464)
T ss_dssp HHHHHHTT---TTTEE--ECC---EECHH--HHHH-HHHHH--HHHHHHHHHHHHHHT-TCEEECEEEEES--SSS---E
T ss_pred HHHHHHHH---hcCCC--CCC---ccCHH--HHHH-HHHHH--HHHHHHHHHHHHHhC-CCEEEEeEEEEe--cCC---e
Confidence 3332 110 11221 000 00000 0000 00000 023445566666664 899999885432 333 3
Q ss_pred EEEEcCCCcEEEEEcCEEEEecCCCCccc
Q 040732 222 VHYKTKDGQEHKSYAPLTIVCDGGFSNLR 250 (541)
Q Consensus 222 V~v~~~~g~~~~v~a~lvV~AdG~~S~vR 250 (541)
+++.+.+|+..++.+|.||+|||..+...
T Consensus 121 v~V~~~~G~~~~~~~d~lViAtG~~~~~~ 149 (464)
T 2a8x_A 121 LLVDLNDGGTESVTFDNAIIATGSSTRLV 149 (464)
T ss_dssp EEEEETTSCCEEEEEEEEEECCCEEECCC
T ss_pred EEEEeCCCceEEEEcCEEEECCCCCCCCC
Confidence 55656677433467999999999877543
No 115
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.70 E-value=2.4e-08 Score=105.09 Aligned_cols=37 Identities=24% Similarity=0.349 Sum_probs=34.0
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
+.++||+|||||++|+++|..|++.|.+|+|+|+.+.
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~ 40 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGA 40 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 3468999999999999999999999999999999863
No 116
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.68 E-value=8e-08 Score=101.07 Aligned_cols=35 Identities=26% Similarity=0.412 Sum_probs=32.6
Q ss_pred CcEEEECCChHHHHHHHHHhhCCC--cEEEEecCCCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGR--RVHVIERDMTQ 101 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~--~V~viEr~~~~ 101 (541)
+||+|||||++||++|+.|+++|. +|+|+|+++..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 699999999999999999999999 99999998643
No 117
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.67 E-value=7.1e-08 Score=101.99 Aligned_cols=36 Identities=31% Similarity=0.447 Sum_probs=32.0
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
+.++||+||||||+|+++|..|++.|.+|+||||.+
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 58 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRS 58 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 456999999999999999999999999999999875
No 118
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.66 E-value=1.7e-08 Score=106.54 Aligned_cols=37 Identities=32% Similarity=0.494 Sum_probs=34.1
Q ss_pred CCCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 63 SVAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 63 ~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
|+.++||+|||||++|+++|+.|++.|.+|+|||+.+
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~ 39 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYK 39 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 4456899999999999999999999999999999975
No 119
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.65 E-value=9.5e-08 Score=94.32 Aligned_cols=112 Identities=21% Similarity=0.313 Sum_probs=73.7
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEE-EecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchh
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHV-IERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDD 143 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~v-iEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~ 143 (541)
..+||+|||||++|+++|..|+++|++|+| +||.. ... ......
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~-~gG----------------------~~~~~~------------ 47 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGM-PGG----------------------QITSSS------------ 47 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSS-TTG----------------------GGGGCS------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCC-CCc----------------------eeeeec------------
Confidence 457999999999999999999999999999 99932 111 000000
Q ss_pred hHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCeEEEeeeeC--CeEEE
Q 040732 144 CVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGTVTSLFEEN--GIVKG 221 (541)
Q Consensus 144 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~v~~l~~~~--~~v~g 221 (541)
. ...++.. ...+...++...+.+.+.+. +++++.++|+++ .++ +.+.
T Consensus 48 -------------------~--~~~~~~~-------~~~~~~~~~~~~~~~~~~~~-~v~~~~~~v~~i-~~~~~~~~~- 96 (315)
T 3r9u_A 48 -------------------E--IENYPGV-------AQVMDGISFMAPWSEQCMRF-GLKHEMVGVEQI-LKNSDGSFT- 96 (315)
T ss_dssp -------------------C--BCCSTTC-------CSCBCHHHHHHHHHHHHTTT-CCEEECCCEEEE-EECTTSCEE-
T ss_pred -------------------e--eccCCCC-------CCCCCHHHHHHHHHHHHHHc-CcEEEEEEEEEE-ecCCCCcEE-
Confidence 0 0001100 00134456888888888877 899999999888 555 4321
Q ss_pred EEEEcCCCcEEEEEcCEEEEecCCC
Q 040732 222 VHYKTKDGQEHKSYAPLTIVCDGGF 246 (541)
Q Consensus 222 V~v~~~~g~~~~v~a~lvV~AdG~~ 246 (541)
|++.+ ++ ++.+|.||.|+|..
T Consensus 97 v~~~~-~~---~~~~d~lvlAtG~~ 117 (315)
T 3r9u_A 97 IKLEG-GK---TELAKAVIVCTGSA 117 (315)
T ss_dssp EEETT-SC---EEEEEEEEECCCEE
T ss_pred EEEec-CC---EEEeCEEEEeeCCC
Confidence 22322 23 46699999999973
No 120
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.64 E-value=2.6e-07 Score=97.74 Aligned_cols=57 Identities=23% Similarity=0.191 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcCCCcEEEEEcCEEEEecCCCCc
Q 040732 187 RFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 187 ~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
.+.+.|.+.+.+.++++++.++ |+++..+++. |.+.+.+|+. ++||.||.|.|....
T Consensus 256 ~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~---v~v~~~~g~~--~~ad~vI~a~~~~~l 313 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRLGYVFGCPVRSVVNERDA---ARVTARDGRE--FVAKRVVCTIPLNVL 313 (495)
T ss_dssp HHHHHHHHHHHTTTCEEEESSCCEEEEEECSSS---EEEEETTCCE--EEEEEEEECCCGGGG
T ss_pred HHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCE---EEEEECCCCE--EEcCEEEECCCHHHH
Confidence 4566677777776339999987 9999876653 4566677765 459999999997653
No 121
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.64 E-value=3.1e-07 Score=97.83 Aligned_cols=38 Identities=37% Similarity=0.462 Sum_probs=34.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQ 101 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~ 101 (541)
...+||||||||++|+++|..|+++|++|+|+|+++..
T Consensus 2 ~~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 39 (520)
T 1s3e_A 2 SNKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRV 39 (520)
T ss_dssp -CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 34679999999999999999999999999999998743
No 122
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.63 E-value=1.1e-07 Score=103.21 Aligned_cols=52 Identities=10% Similarity=0.193 Sum_probs=42.2
Q ss_pred CCeEEEeCe-EEEeeeeC--CeEEEEEEEc-CCCcEEEEEcCEEEEecCCCCcccc
Q 040732 200 PNVRMEEGT-VTSLFEEN--GIVKGVHYKT-KDGQEHKSYAPLTIVCDGGFSNLRR 251 (541)
Q Consensus 200 ~~v~v~~~~-v~~l~~~~--~~v~gV~v~~-~~g~~~~v~a~lvV~AdG~~S~vR~ 251 (541)
+|++++.++ |+++..++ +++.||++.+ .+|+..++.||.||.|.|.....+-
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~l 328 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQL 328 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHH
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHH
Confidence 478999997 99988764 3788999986 5788778899999999998766544
No 123
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.63 E-value=5.5e-08 Score=103.54 Aligned_cols=38 Identities=26% Similarity=0.401 Sum_probs=34.8
Q ss_pred CCCCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 62 ESVAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 62 ~~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
+++.+|||+||||||+|+++|+.|++.|.+|+|||+.+
T Consensus 28 ~~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 28 PKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp CSSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CcCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 34567999999999999999999999999999999965
No 124
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.61 E-value=3.3e-07 Score=94.63 Aligned_cols=58 Identities=19% Similarity=0.233 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcCCCcEEEEEcCEEEEecCCCCcc
Q 040732 187 RFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 187 ~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
.+.+.+.+.+++. |++++.++ |+++..+++++.+|+ +++|++ +.||.||.|.|.....
T Consensus 195 ~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~v~~v~--l~dG~~--i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 195 ALSEFYQAEHRAH-GVDLRTGAAMDCIEGDGTKVTGVR--MQDGSV--IPADIVIVGIGIVPCV 253 (415)
T ss_dssp HHHHHHHHHHHHT-TCEEEETCCEEEEEESSSBEEEEE--ESSSCE--EECSEEEECSCCEESC
T ss_pred HHHHHHHHHHHhC-CCEEEECCEEEEEEecCCcEEEEE--eCCCCE--EEcCEEEECCCCccCh
Confidence 4566667777776 89999987 999887777665555 567875 4599999999987653
No 125
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.60 E-value=6.6e-08 Score=101.19 Aligned_cols=33 Identities=30% Similarity=0.516 Sum_probs=31.8
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERD 98 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~ 98 (541)
++||+|||||++|+++|..|++.|.+|+|+|+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 489999999999999999999999999999997
No 126
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.59 E-value=1.6e-07 Score=98.72 Aligned_cols=36 Identities=33% Similarity=0.369 Sum_probs=33.5
Q ss_pred CCCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecC
Q 040732 63 SVAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERD 98 (541)
Q Consensus 63 ~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~ 98 (541)
|+.++||+|||||++|+++|..|++.|.+|+|||++
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 36 (467)
T 1zk7_A 1 MEPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG 36 (467)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 345789999999999999999999999999999987
No 127
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.59 E-value=1.2e-07 Score=99.94 Aligned_cols=57 Identities=12% Similarity=0.157 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcCCCcEEEEEcCEEEEecCCCCcc
Q 040732 187 RFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 187 ~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
.+.+.+.+.+++. +++++.++ |+++..+++. +.+..++|++ +.+|.||.|+|..+..
T Consensus 233 ~~~~~l~~~l~~~-Gv~i~~~~~V~~i~~~~~~---v~v~~~~g~~--i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 233 DLRQLLNDAMVAK-GISIIYEATVSQVQSTENC---YNVVLTNGQT--ICADRVMLATGRVPNT 290 (484)
T ss_dssp HHHHHHHHHHHHH-TCEEESSCCEEEEEECSSS---EEEEETTSCE--EEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHHC-CCEEEeCCEEEEEEeeCCE---EEEEECCCcE--EEcCEEEEeeCCCcCC
Confidence 4566677777666 89999986 9998876664 3455677865 5599999999976544
No 128
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.59 E-value=1.1e-07 Score=99.92 Aligned_cols=35 Identities=29% Similarity=0.383 Sum_probs=33.1
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.++||+|||||++|+++|..|++.|.+|+|||+.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 39 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNE 39 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 45899999999999999999999999999999985
No 129
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.57 E-value=8e-07 Score=92.28 Aligned_cols=56 Identities=20% Similarity=0.178 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcCCCcEEEEEcCEEEEecCCCCc
Q 040732 187 RFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 187 ~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
.+.+.|.+.+++. |++++.++ |+++..+++++.+|+ .+|++ +.||.||.|.|.++.
T Consensus 235 ~l~~~l~~~~~~~-G~~i~~~~~V~~I~~~~~~v~~v~---~~g~~--~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 235 ELPQGFARLSAIY-GGTYMLNKPVDDIIMENGKVVGVK---SEGEV--ARCKQLICDPSYVPD 291 (433)
T ss_dssp HHHHHHHHHHHHH-TCCCBCSCCCCEEEEETTEEEEEE---ETTEE--EECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHc-CCEEECCCEEEEEEEeCCEEEEEE---ECCeE--EECCEEEECCCCCcc
Confidence 5777788877776 77888887 999988888776655 25654 569999999999874
No 130
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.55 E-value=8.6e-08 Score=101.28 Aligned_cols=36 Identities=28% Similarity=0.386 Sum_probs=33.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..+|||+||||||+|+++|..|++.|.+|+||||.+
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 356999999999999999999999999999999854
No 131
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.53 E-value=1.3e-06 Score=89.76 Aligned_cols=57 Identities=25% Similarity=0.339 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcCCCcEEEEEcCEEEEecCCCCc
Q 040732 187 RFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 187 ~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
.+.+.+.+.+++. |++++.++ |+++..+++++.+|+ +++|++ +.||.||.|.|....
T Consensus 185 ~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~v~~V~--~~dG~~--i~aD~Vv~a~G~~p~ 242 (404)
T 3fg2_P 185 EISSYFHDRHSGA-GIRMHYGVRATEIAAEGDRVTGVV--LSDGNT--LPCDLVVVGVGVIPN 242 (404)
T ss_dssp HHHHHHHHHHHHT-TCEEECSCCEEEEEEETTEEEEEE--ETTSCE--EECSEEEECCCEEEC
T ss_pred HHHHHHHHHHHhC-CcEEEECCEEEEEEecCCcEEEEE--eCCCCE--EEcCEEEECcCCccC
Confidence 4566677777776 89999986 999988777766555 577875 459999999998654
No 132
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.52 E-value=1.4e-07 Score=99.25 Aligned_cols=35 Identities=34% Similarity=0.382 Sum_probs=33.3
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.+|||+|||||++|+++|+.|++.|.+|+|+|+.+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 36 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYK 36 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 46999999999999999999999999999999986
No 133
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.51 E-value=1.4e-07 Score=98.01 Aligned_cols=36 Identities=28% Similarity=0.566 Sum_probs=32.9
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCC--cEEEEecCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGR--RVHVIERDMT 100 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~--~V~viEr~~~ 100 (541)
..+||+|||||++|+++|..|++.|. +|+|+|+.+.
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~ 40 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATV 40 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCS
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCC
Confidence 46899999999999999999999998 7999998753
No 134
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.50 E-value=1.6e-07 Score=96.78 Aligned_cols=33 Identities=27% Similarity=0.356 Sum_probs=31.2
Q ss_pred CcEEEECCChHHHHHHHHHhh---CCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGT---DGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~---~G~~V~viEr~~ 99 (541)
.||+|||||++|+++|..|++ .|.+|+|||+++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCC
Confidence 379999999999999999999 899999999986
No 135
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.47 E-value=6.9e-07 Score=95.74 Aligned_cols=52 Identities=23% Similarity=0.395 Sum_probs=43.7
Q ss_pred HcCCCeEEEeCe-EEEeeee----CCeEEEEEEEcCCCcEEEEEcC-EEEEecCCCCc
Q 040732 197 ASLPNVRMEEGT-VTSLFEE----NGIVKGVHYKTKDGQEHKSYAP-LTIVCDGGFSN 248 (541)
Q Consensus 197 ~~~~~v~v~~~~-v~~l~~~----~~~v~gV~v~~~~g~~~~v~a~-lvV~AdG~~S~ 248 (541)
.+.+|+++..++ |++++.+ +++++||++...+|+..+++|+ -||.|.|+...
T Consensus 237 ~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~S 294 (583)
T 3qvp_A 237 YQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVS 294 (583)
T ss_dssp TTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTH
T ss_pred hcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCC
Confidence 345799999998 9999987 6789999998678888888886 79999998854
No 136
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.46 E-value=2.8e-07 Score=96.75 Aligned_cols=34 Identities=24% Similarity=0.348 Sum_probs=32.5
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
++||+|||||++|+++|+.|++.|.+|+|||+.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4799999999999999999999999999999985
No 137
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.45 E-value=3.9e-07 Score=95.80 Aligned_cols=35 Identities=23% Similarity=0.250 Sum_probs=30.9
Q ss_pred CCcEEEECCChHHHHHHHHHhhC--CCcEEEEecCCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTD--GRRVHVIERDMT 100 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~--G~~V~viEr~~~ 100 (541)
++||+|||||++|+++|..|++. |.+|+|||+++.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCc
Confidence 46999999999999999999998 999999999864
No 138
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.45 E-value=2.9e-07 Score=97.06 Aligned_cols=35 Identities=34% Similarity=0.422 Sum_probs=32.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERD 98 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~ 98 (541)
+.+|||+||||||+|+++|+.|++.|.+|+||||.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 45699999999999999999999999999999964
No 139
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.44 E-value=2.4e-07 Score=96.38 Aligned_cols=34 Identities=26% Similarity=0.502 Sum_probs=31.8
Q ss_pred CCcEEEECCChHHHHHHHHHhh---CCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGT---DGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~---~G~~V~viEr~~ 99 (541)
..||+|||||++|+++|..|++ .|.+|+|||+.+
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~ 40 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAND 40 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCC
Confidence 3699999999999999999999 899999999986
No 140
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.43 E-value=2.1e-07 Score=98.10 Aligned_cols=35 Identities=17% Similarity=0.331 Sum_probs=31.5
Q ss_pred CCcEEEECCChHHHHHHHHHhhC--CCcEEEEecCCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTD--GRRVHVIERDMT 100 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~--G~~V~viEr~~~ 100 (541)
.+||+|||||++|+++|..|++. |.+|+|||+.+.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~ 72 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEI 72 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 36999999999999999999986 899999999863
No 141
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.43 E-value=9.8e-07 Score=94.59 Aligned_cols=52 Identities=25% Similarity=0.355 Sum_probs=43.8
Q ss_pred HcCCCeEEEeCe-EEEeeee--CCeEEEEEEEcCCCcEEEEEc-CEEEEecCCCCc
Q 040732 197 ASLPNVRMEEGT-VTSLFEE--NGIVKGVHYKTKDGQEHKSYA-PLTIVCDGGFSN 248 (541)
Q Consensus 197 ~~~~~v~v~~~~-v~~l~~~--~~~v~gV~v~~~~g~~~~v~a-~lvV~AdG~~S~ 248 (541)
.+.+|+++..++ |++++.+ +++++||++...+|+..+++| +-||.|.|+...
T Consensus 216 ~~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~s 271 (577)
T 3q9t_A 216 KNKPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFET 271 (577)
T ss_dssp SSCTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHH
T ss_pred hcCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCC
Confidence 345799999998 9999988 788999999877788888888 679999998754
No 142
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.42 E-value=4e-07 Score=96.43 Aligned_cols=34 Identities=29% Similarity=0.396 Sum_probs=32.2
Q ss_pred CCcEEEECCChHHHHHHHHHhhC---CCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTD---GRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~---G~~V~viEr~~ 99 (541)
++||+|||||++|+++|..|++. |.+|+|||+.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 47999999999999999999999 99999999985
No 143
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.40 E-value=6.4e-07 Score=94.31 Aligned_cols=36 Identities=25% Similarity=0.404 Sum_probs=32.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
+.++||+|||||++|+++|..|++.|.+|+|||++.
T Consensus 9 ~~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 9 TKHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred cccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 346899999999999999999999999999999973
No 144
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.40 E-value=2.5e-07 Score=96.57 Aligned_cols=33 Identities=21% Similarity=0.217 Sum_probs=31.1
Q ss_pred CcEEEECCChHHHHHHHHHhhC--CCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTD--GRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~--G~~V~viEr~~ 99 (541)
+||+|||||++|+++|..|++. |.+|+|||+.+
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCC
Confidence 4899999999999999999997 99999999986
No 145
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.35 E-value=8.7e-07 Score=92.64 Aligned_cols=34 Identities=32% Similarity=0.450 Sum_probs=32.2
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
++||+|||||++|+++|..|++.|.+|+|+|+.+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 34 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEK 34 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCC
Confidence 3799999999999999999999999999999985
No 146
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.34 E-value=1.5e-06 Score=94.05 Aligned_cols=37 Identities=24% Similarity=0.333 Sum_probs=33.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhC--CCcEEEEecCCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTD--GRRVHVIERDMT 100 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~--G~~V~viEr~~~ 100 (541)
+...||+|||||++|+++|..|++. |.+|+|+|+.+.
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~ 72 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEY 72 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSC
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCC
Confidence 4567999999999999999999998 899999999863
No 147
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.34 E-value=4.9e-07 Score=94.44 Aligned_cols=34 Identities=29% Similarity=0.256 Sum_probs=31.7
Q ss_pred CcEEEECCChHHHHHHHHHhhC--CCcEEEEecCCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTD--GRRVHVIERDMT 100 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~--G~~V~viEr~~~ 100 (541)
+||+|||||++|+++|..|++. |.+|+|+|+.+.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDN 36 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 5899999999999999999998 999999999863
No 148
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.34 E-value=3.9e-07 Score=90.83 Aligned_cols=37 Identities=35% Similarity=0.521 Sum_probs=32.9
Q ss_pred CCCcEEEECCChHHHHHHHHHhh--CCCcEEEEecCCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGT--DGRRVHVIERDMTQ 101 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~--~G~~V~viEr~~~~ 101 (541)
.++||+||||||||+++|+.|++ .|++|+|+||.+.+
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~ 102 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCC
Confidence 46899999999999999999974 59999999998744
No 149
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.33 E-value=8.2e-07 Score=93.46 Aligned_cols=35 Identities=37% Similarity=0.508 Sum_probs=32.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERD 98 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~ 98 (541)
+..+||+|||||++|+++|+.|++.|.+|+|+|++
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~ 52 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESH 52 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 45699999999999999999999999999999976
No 150
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.32 E-value=2.9e-06 Score=89.71 Aligned_cols=63 Identities=16% Similarity=0.119 Sum_probs=45.8
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCC-------eEEEEEEEc-CCCcEEEEEcCEEEEecCC
Q 040732 182 SFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENG-------IVKGVHYKT-KDGQEHKSYAPLTIVCDGG 245 (541)
Q Consensus 182 ~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~-------~v~gV~v~~-~~g~~~~v~a~lvV~AdG~ 245 (541)
...|.++.+.|+..+.+. +..+++++ |+++...+. ....|+..+ ++|+..++.|+.||.|+|.
T Consensus 141 ~p~r~E~~~Yl~~~A~~~-~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 141 LPARLEFEDYMRWCAQQF-SDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp CCBHHHHHHHHHHHHHTT-GGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHc-CCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 356788999999999887 56677887 888875432 123455544 3566777889999999995
No 151
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.31 E-value=8.7e-07 Score=90.46 Aligned_cols=36 Identities=19% Similarity=0.326 Sum_probs=32.9
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
++.+|+|||||+||+++|..|++.+.+|+|+|+++.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~ 43 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKY 43 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSS
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCC
Confidence 457899999999999999999888999999999874
No 152
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.31 E-value=1.1e-06 Score=91.80 Aligned_cols=34 Identities=21% Similarity=0.414 Sum_probs=31.9
Q ss_pred CcEEEECCChHHHHHHHHHhhC--CCcEEEEecCCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTD--GRRVHVIERDMT 100 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~--G~~V~viEr~~~ 100 (541)
+||+|||||++|+++|..|++. |.+|+|||+.+.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 5999999999999999999998 899999999863
No 153
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.31 E-value=9.8e-07 Score=93.95 Aligned_cols=38 Identities=26% Similarity=0.304 Sum_probs=35.0
Q ss_pred CCCCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 62 ESVAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 62 ~~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.++..+||+|||||++|+++|..|++.|.+|+|||+++
T Consensus 39 ~~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 76 (523)
T 1mo9_A 39 NDPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWP 76 (523)
T ss_dssp TCCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 34567999999999999999999999999999999986
No 154
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.30 E-value=4.8e-07 Score=95.54 Aligned_cols=35 Identities=31% Similarity=0.452 Sum_probs=32.6
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCC---CcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDG---RRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G---~~V~viEr~~ 99 (541)
.++||+|||||++|+++|..|++.| .+|+|||+.+
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~ 71 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNS 71 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCC
Confidence 3589999999999999999999988 9999999986
No 155
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.27 E-value=1.8e-06 Score=90.03 Aligned_cols=35 Identities=26% Similarity=0.305 Sum_probs=32.3
Q ss_pred CCcEEEECCChHHHHHHHHHhhC--CCcEEEEecCCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTD--GRRVHVIERDMT 100 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~--G~~V~viEr~~~ 100 (541)
.+||+|||||++|+++|..|++. |.+|+|+|+.+.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~ 39 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEW 39 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCc
Confidence 47999999999999999999997 889999999863
No 156
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.26 E-value=5.3e-07 Score=93.56 Aligned_cols=33 Identities=30% Similarity=0.478 Sum_probs=31.4
Q ss_pred CcEEEECCChHHHHHHHHHhh--CCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGT--DGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~--~G~~V~viEr~~ 99 (541)
.||+|||||++|+++|..|++ .|.+|+|||+.+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCC
Confidence 589999999999999999999 899999999986
No 157
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.26 E-value=1.5e-06 Score=90.98 Aligned_cols=34 Identities=24% Similarity=0.374 Sum_probs=32.0
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERD 98 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~ 98 (541)
.++||+|||||++|+++|+.|+++|.+|+|+||.
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~ 37 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF 37 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 3589999999999999999999999999999993
No 158
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.26 E-value=4.6e-06 Score=87.37 Aligned_cols=102 Identities=16% Similarity=0.187 Sum_probs=74.4
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.... .
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------~----------------------- 207 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP------------------Q----------------------- 207 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------------------T-----------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc------------------c-----------------------
Confidence 46899999999999999999999999999999762111 0
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
...++.+.+.+.+++. +++++.++ |+++..+++.+ .|++
T Consensus 208 --------------------------------------~~~~~~~~l~~~l~~~-gV~i~~~~~v~~i~~~~~~~-~v~~ 247 (464)
T 2eq6_A 208 --------------------------------------GDPETAALLRRALEKE-GIRVRTKTKAVGYEKKKDGL-HVRL 247 (464)
T ss_dssp --------------------------------------SCHHHHHHHHHHHHHT-TCEEECSEEEEEEEEETTEE-EEEE
T ss_pred --------------------------------------cCHHHHHHHHHHHHhc-CCEEEcCCEEEEEEEeCCEE-EEEE
Confidence 0012445566666665 89999996 88888766543 2443
Q ss_pred EcCC--CcEEEEEcCEEEEecCCCCcc
Q 040732 225 KTKD--GQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 225 ~~~~--g~~~~v~a~lvV~AdG~~S~v 249 (541)
.. + |+..++.+|.||.|+|..+..
T Consensus 248 ~~-~~~g~~~~i~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 248 EP-AEGGEGEEVVVDKVLVAVGRKPRT 273 (464)
T ss_dssp EE-TTCCSCEEEEESEEEECSCEEESC
T ss_pred ee-cCCCceeEEEcCEEEECCCcccCC
Confidence 31 4 764457799999999987654
No 159
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.23 E-value=1.5e-06 Score=91.15 Aligned_cols=34 Identities=29% Similarity=0.353 Sum_probs=32.5
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
++||+|||||++|+++|..|++.|.+|+|+|+.+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 5899999999999999999999999999999975
No 160
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.23 E-value=3.2e-06 Score=89.86 Aligned_cols=35 Identities=29% Similarity=0.395 Sum_probs=32.9
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
-+||||||||||+|..+|..+++.|.+|+|||+..
T Consensus 41 ydYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~ 75 (542)
T 4b1b_A 41 YDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVK 75 (542)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccc
Confidence 35999999999999999999999999999999875
No 161
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.22 E-value=6.5e-06 Score=88.69 Aligned_cols=54 Identities=15% Similarity=0.220 Sum_probs=43.5
Q ss_pred HHcCCCeEEEeCe-EEEeeeeC----CeEEEEEEEcCCCcEEEEEc-CEEEEecCCCCcc
Q 040732 196 AASLPNVRMEEGT-VTSLFEEN----GIVKGVHYKTKDGQEHKSYA-PLTIVCDGGFSNL 249 (541)
Q Consensus 196 ~~~~~~v~v~~~~-v~~l~~~~----~~v~gV~v~~~~g~~~~v~a-~lvV~AdG~~S~v 249 (541)
+.+.+|+++..++ |++++.++ +++.||++...+|+..+++| +-||.|.|+...-
T Consensus 240 ~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp 299 (587)
T 1gpe_A 240 NYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISP 299 (587)
T ss_dssp TTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHH
T ss_pred hhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCH
Confidence 3345699999997 99998653 47899998766788778889 9999999997653
No 162
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.21 E-value=1.7e-06 Score=92.54 Aligned_cols=57 Identities=21% Similarity=0.295 Sum_probs=43.8
Q ss_pred HHHHHHHcCCCeEEEeCe-EEEeeee----C-CeEEEEEEEcCCC-cEEEEEc-CEEEEecCCCC
Q 040732 191 RMREKAASLPNVRMEEGT-VTSLFEE----N-GIVKGVHYKTKDG-QEHKSYA-PLTIVCDGGFS 247 (541)
Q Consensus 191 ~L~~~~~~~~~v~v~~~~-v~~l~~~----~-~~v~gV~v~~~~g-~~~~v~a-~lvV~AdG~~S 247 (541)
.....+.+.+|+++..++ |++++.+ + ++++||++...+| +..+++| +-||.|.|+..
T Consensus 212 ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~ 276 (566)
T 3fim_B 212 AYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVG 276 (566)
T ss_dssp HTHHHHTTCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHH
T ss_pred HHhhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcC
Confidence 333444456799999998 9999876 3 5788999987666 7677888 78999999764
No 163
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.21 E-value=3.2e-06 Score=90.01 Aligned_cols=60 Identities=17% Similarity=0.305 Sum_probs=46.4
Q ss_pred HHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcCCCcEEEEEcCEEEEecCCCCc
Q 040732 188 FIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 188 l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
....+...++..+|.++..+. |+++..++++++||.+...++. ..+.|+-||.|.|+..+
T Consensus 212 ~~~~~~~~~~~r~nl~v~~~~~v~~i~~~~~~a~gv~~~~~~~~-~~~~a~~VILsAGai~S 272 (526)
T 3t37_A 212 ADAWLTKAVRGRKNLTILTGSRVRRLKLEGNQVRSLEVVGRQGS-AEVFADQIVLCAGALES 272 (526)
T ss_dssp HHHHSCHHHHTCTTEEEECSCEEEEEEEETTEEEEEEEEETTEE-EEEEEEEEEECSHHHHH
T ss_pred ccccccccccCCCCeEEEeCCEEEEEEecCCeEEEEEEEecCce-EEEeecceEEcccccCC
Confidence 334444555666799999987 9999999999999999776554 56789999999998543
No 164
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.21 E-value=8.1e-07 Score=92.18 Aligned_cols=32 Identities=31% Similarity=0.427 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHHhhCC--CcEEEEecCC
Q 040732 68 DVIVVGAGVAGAALAHTLGTDG--RRVHVIERDM 99 (541)
Q Consensus 68 dVvIVGaG~aGl~~A~~La~~G--~~V~viEr~~ 99 (541)
+|||||||+||+++|..|++.+ .+|+|||+++
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCC
Confidence 6999999999999999999865 7999999875
No 165
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.21 E-value=9.2e-06 Score=82.78 Aligned_cols=100 Identities=19% Similarity=0.241 Sum_probs=75.6
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.... +
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------~----------------------- 183 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP------------------G----------------------- 183 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST------------------T-----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh------------------c-----------------------
Confidence 56899999999999999999999999999998752111 0
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
+....+.+.+.+.+++. +++++.++ |+++..+++. +.+
T Consensus 184 -------------------------------------~~~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~---~~v 222 (384)
T 2v3a_A 184 -------------------------------------LLHPAAAKAVQAGLEGL-GVRFHLGPVLASLKKAGEG---LEA 222 (384)
T ss_dssp -------------------------------------TSCHHHHHHHHHHHHTT-TCEEEESCCEEEEEEETTE---EEE
T ss_pred -------------------------------------ccCHHHHHHHHHHHHHc-CCEEEeCCEEEEEEecCCE---EEE
Confidence 00113556666667666 89999987 9998876653 445
Q ss_pred EcCCCcEEEEEcCEEEEecCCCCcc
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
..++|++ +.+|.||.|+|..+..
T Consensus 223 ~~~~g~~--i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 223 HLSDGEV--IPCDLVVSAVGLRPRT 245 (384)
T ss_dssp EETTSCE--EEESEEEECSCEEECC
T ss_pred EECCCCE--EECCEEEECcCCCcCH
Confidence 5677865 5599999999987764
No 166
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.21 E-value=5.6e-06 Score=87.30 Aligned_cols=33 Identities=30% Similarity=0.510 Sum_probs=31.0
Q ss_pred CCCcEEEECCChHHHHHHHHHhh-CCCcEEEEec
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGT-DGRRVHVIER 97 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~-~G~~V~viEr 97 (541)
.++||+|||||++|+++|+.|++ .|.+|+|||+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 35899999999999999999999 9999999994
No 167
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.21 E-value=9e-06 Score=87.99 Aligned_cols=35 Identities=26% Similarity=0.378 Sum_probs=32.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERD 98 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~ 98 (541)
...+||+||||||||+++|..|++.|.+|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 45689999999999999999999999999999984
No 168
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.21 E-value=5.7e-06 Score=86.39 Aligned_cols=99 Identities=20% Similarity=0.170 Sum_probs=73.4
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.... . +
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~------------------~-----~----------------- 206 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILP------------------T-----M----------------- 206 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT------------------T-----S-----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcccc------------------c-----c-----------------
Confidence 46899999999999999999999999999999862111 0 0
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
...+.+.|.+.+++. +++++.++ |+++..+++. +.+
T Consensus 207 ---------------------------------------~~~~~~~l~~~l~~~-Gv~i~~~~~V~~i~~~~~~---v~v 243 (455)
T 2yqu_A 207 ---------------------------------------DLEVSRAAERVFKKQ-GLTIRTGVRVTAVVPEAKG---ARV 243 (455)
T ss_dssp ---------------------------------------CHHHHHHHHHHHHHH-TCEEECSCCEEEEEEETTE---EEE
T ss_pred ---------------------------------------CHHHHHHHHHHHHHC-CCEEEECCEEEEEEEeCCE---EEE
Confidence 012444455555555 89999986 9998877653 445
Q ss_pred EcCCCcEEEEEcCEEEEecCCCCcc
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
.+++|++ +.+|.||.|+|..+..
T Consensus 244 ~~~~g~~--i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 244 ELEGGEV--LEADRVLVAVGRRPYT 266 (455)
T ss_dssp EETTSCE--EEESEEEECSCEEECC
T ss_pred EECCCeE--EEcCEEEECcCCCcCC
Confidence 5567765 5599999999987754
No 169
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.20 E-value=7.5e-06 Score=87.44 Aligned_cols=57 Identities=16% Similarity=0.196 Sum_probs=44.0
Q ss_pred HHHHHHHHcCCCeEEEeCe-EEEeeeeC-CeEEEEEEEcCC-CcEEEEEcC-EEEEecCCC
Q 040732 190 QRMREKAASLPNVRMEEGT-VTSLFEEN-GIVKGVHYKTKD-GQEHKSYAP-LTIVCDGGF 246 (541)
Q Consensus 190 ~~L~~~~~~~~~v~v~~~~-v~~l~~~~-~~v~gV~v~~~~-g~~~~v~a~-lvV~AdG~~ 246 (541)
..+.+.+.+.+|+++..++ |++++.++ +++.||++...+ |+..+++|+ .||.|.|+.
T Consensus 212 ~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~ 272 (546)
T 2jbv_A 212 VSYIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAI 272 (546)
T ss_dssp HHHTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHH
T ss_pred HHHHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCcc
Confidence 3344444445699999998 99999877 789999987532 777778898 999999985
No 170
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.19 E-value=1.5e-06 Score=91.91 Aligned_cols=35 Identities=31% Similarity=0.499 Sum_probs=32.4
Q ss_pred CCCCCcEEEECCChHHHHHHHHHhh-CCCcEEEEec
Q 040732 63 SVAGPDVIVVGAGVAGAALAHTLGT-DGRRVHVIER 97 (541)
Q Consensus 63 ~~~~~dVvIVGaG~aGl~~A~~La~-~G~~V~viEr 97 (541)
|..++||+|||||++|+++|+.|++ .|++|+|||+
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 4456899999999999999999999 9999999994
No 171
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.15 E-value=2.5e-06 Score=86.55 Aligned_cols=35 Identities=34% Similarity=0.568 Sum_probs=31.2
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
+..||+|||||+||+++|..|++.| +|+|+|+++.
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~ 41 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPV 41 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSS
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCC
Confidence 4579999999999999999999999 9999999863
No 172
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.15 E-value=2.2e-06 Score=94.86 Aligned_cols=38 Identities=37% Similarity=0.448 Sum_probs=34.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQ 101 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~ 101 (541)
...+||+|||||++|+++|+.|++.|.+|+|+|+....
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 371 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRI 371 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccce
Confidence 35689999999999999999999999999999997643
No 173
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.15 E-value=8.7e-07 Score=93.94 Aligned_cols=38 Identities=32% Similarity=0.504 Sum_probs=33.9
Q ss_pred CCCcEEEECCChHHHHHHHHHhh-CCCcEEEEecCCCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGT-DGRRVHVIERDMTQP 102 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~-~G~~V~viEr~~~~~ 102 (541)
.++||||||||++||++|+.|++ .|++|+|+|+++...
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~G 47 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPG 47 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCc
Confidence 46899999999999999999998 599999999997443
No 174
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.14 E-value=5e-06 Score=89.36 Aligned_cols=34 Identities=18% Similarity=0.266 Sum_probs=31.4
Q ss_pred CcEEEECCChHHHHHHHHHhhC--CCcEEEEecCCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTD--GRRVHVIERDMT 100 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~--G~~V~viEr~~~ 100 (541)
.||+|||||++|+++|..|++. |.+|+|+|+.+.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~ 37 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEY 37 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCC
Confidence 4899999999999999999998 889999999863
No 175
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.13 E-value=3.6e-06 Score=85.13 Aligned_cols=37 Identities=27% Similarity=0.478 Sum_probs=34.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecC-CC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERD-MT 100 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~-~~ 100 (541)
+..+||+|||||++|+++|+.|+++|++|+|+|+. ..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~ 79 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANR 79 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccc
Confidence 45689999999999999999999999999999998 53
No 176
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.13 E-value=1.9e-06 Score=88.85 Aligned_cols=34 Identities=26% Similarity=0.507 Sum_probs=31.6
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCc--EEEEecCCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRR--VHVIERDMT 100 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~--V~viEr~~~ 100 (541)
.+|+|||||++|+++|..|+++|.+ |+|+|+.+.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~ 38 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPH 38 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCC
Confidence 4899999999999999999999987 999999864
No 177
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.12 E-value=6.4e-06 Score=84.71 Aligned_cols=36 Identities=25% Similarity=0.436 Sum_probs=32.7
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCC--cEEEEecCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGR--RVHVIERDMT 100 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~--~V~viEr~~~ 100 (541)
.++||+|||||++|+++|..|++.|. +|+|+|+.+.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~ 43 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAE 43 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCC
Confidence 46899999999999999999999998 5999999863
No 178
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.12 E-value=3.5e-06 Score=88.95 Aligned_cols=35 Identities=31% Similarity=0.299 Sum_probs=32.1
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
..+||+|||||++|+++|..|+++ .+|+|+|+.+.
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~ 141 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGW 141 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSS
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCC
Confidence 347999999999999999999999 99999999863
No 179
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.11 E-value=5.4e-06 Score=86.67 Aligned_cols=34 Identities=21% Similarity=0.353 Sum_probs=32.0
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERD 98 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~ 98 (541)
.++||+|||||++|+++|..|++.|.+|+|+|+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 4589999999999999999999999999999994
No 180
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.08 E-value=1.9e-05 Score=82.18 Aligned_cols=100 Identities=25% Similarity=0.331 Sum_probs=72.8
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhh
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDC 144 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~ 144 (541)
...+|+|||||++|+.+|..|++.|.+|+|+|+.+.... +.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------~~--------------------- 188 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLG------------------VY--------------------- 188 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT------------------TT---------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccc------------------cc---------------------
Confidence 467999999999999999999999999999999862211 00
Q ss_pred HhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEE
Q 040732 145 VEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVH 223 (541)
Q Consensus 145 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~ 223 (541)
+ ..++.+.+.+.+++. +++++.++ |+++..+ +++..|.
T Consensus 189 --------------------------------------~-~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~-~~v~~v~ 227 (447)
T 1nhp_A 189 --------------------------------------L-DKEFTDVLTEEMEAN-NITIATGETVERYEGD-GRVQKVV 227 (447)
T ss_dssp --------------------------------------C-CHHHHHHHHHHHHTT-TEEEEESCCEEEEECS-SBCCEEE
T ss_pred --------------------------------------C-CHHHHHHHHHHHHhC-CCEEEcCCEEEEEEcc-CcEEEEE
Confidence 0 013556667777776 89999986 8888765 4433333
Q ss_pred EEcCCCcEEEEEcCEEEEecCCCCcc
Q 040732 224 YKTKDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 224 v~~~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
. +|++ +.+|.||.|+|.....
T Consensus 228 --~-~~~~--i~~d~vi~a~G~~p~~ 248 (447)
T 1nhp_A 228 --T-DKNA--YDADLVVVAVGVRPNT 248 (447)
T ss_dssp --E-SSCE--EECSEEEECSCEEESC
T ss_pred --E-CCCE--EECCEEEECcCCCCCh
Confidence 3 4443 5699999999976543
No 181
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.07 E-value=4e-05 Score=75.59 Aligned_cols=100 Identities=19% Similarity=0.200 Sum_probs=74.5
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||+|..|+-+|..|++.|.+|+++++.+.... .
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~--------------------------~--------------- 183 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA--------------------------E--------------- 183 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC--------------------------C---------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc--------------------------C---------------
Confidence 45899999999999999999999999999998752100 0
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
..+.+.+.+.+++. +++++.++ |+++..+++++.+|++
T Consensus 184 ----------------------------------------~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~v~~v~~ 222 (320)
T 1trb_A 184 ----------------------------------------KILIKRLMDKVENG-NIILHTNRTLEEVTGDQMGVTGVRL 222 (320)
T ss_dssp ----------------------------------------HHHHHHHHHHHHTS-SEEEECSCEEEEEEECSSSEEEEEE
T ss_pred ----------------------------------------HHHHHHHHHhcccC-CeEEEcCceeEEEEcCCCceEEEEE
Confidence 11334455556665 89999986 8888877667777887
Q ss_pred EcC-C-CcEEEEEcCEEEEecCCCC
Q 040732 225 KTK-D-GQEHKSYAPLTIVCDGGFS 247 (541)
Q Consensus 225 ~~~-~-g~~~~v~a~lvV~AdG~~S 247 (541)
.+. + |+..++.+|.||.|.|...
T Consensus 223 ~~~~~~g~~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 223 RDTQNSDNIESLDVAGLFVAIGHSP 247 (320)
T ss_dssp ECCTTCCCCEEEECSEEEECSCEEE
T ss_pred EeccCCCceEEEEcCEEEEEeCCCC
Confidence 652 2 5445578999999999543
No 182
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.06 E-value=5e-06 Score=87.93 Aligned_cols=39 Identities=36% Similarity=0.451 Sum_probs=34.0
Q ss_pred CCCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCC
Q 040732 63 SVAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQ 101 (541)
Q Consensus 63 ~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~ 101 (541)
|...+||+|||||++||++|+.|+++|++|+|+|+.+..
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 48 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKA 48 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSS
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCC
Confidence 455789999999999999999999999999999998744
No 183
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.05 E-value=2.4e-05 Score=81.87 Aligned_cols=100 Identities=19% Similarity=0.146 Sum_probs=73.0
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+.... .+.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~-----------------------~~~---------------- 206 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF-----------------------QFD---------------- 206 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----------------------TSC----------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc-----------------------ccC----------------
Confidence 35899999999999999999999999999998752111 000
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
..+.+.+.+.+++. +++++.++ |+++..+++. +.+
T Consensus 207 ----------------------------------------~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~---~~v 242 (463)
T 2r9z_A 207 ----------------------------------------PLLSATLAENMHAQ-GIETHLEFAVAALERDAQG---TTL 242 (463)
T ss_dssp ----------------------------------------HHHHHHHHHHHHHT-TCEEESSCCEEEEEEETTE---EEE
T ss_pred ----------------------------------------HHHHHHHHHHHHHC-CCEEEeCCEEEEEEEeCCe---EEE
Confidence 01223445555555 89999997 9998876553 445
Q ss_pred EcCCCcEEEEEcCEEEEecCCCCcc
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
.+++|+. ++.+|.||.|+|.....
T Consensus 243 ~~~~G~~-~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 243 VAQDGTR-LEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp EETTCCE-EEEESEEEECSCEEESC
T ss_pred EEeCCcE-EEEcCEEEECCCCCcCC
Confidence 5678873 46699999999987654
No 184
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.04 E-value=1.2e-05 Score=82.23 Aligned_cols=33 Identities=33% Similarity=0.472 Sum_probs=29.4
Q ss_pred CcEEEECCChHHHHHHHHHhhCC--CcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDG--RRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G--~~V~viEr~~ 99 (541)
.+|||||||+||+++|..|++.| .+|+|||+++
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNE 37 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCC
Confidence 36999999999999999998865 5899999875
No 185
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.03 E-value=6.1e-06 Score=87.16 Aligned_cols=36 Identities=19% Similarity=0.407 Sum_probs=32.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..+.+|||||||+||+.+|..|++.+.+|+|||+++
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCC
Confidence 345689999999999999999999999999999975
No 186
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.02 E-value=2.1e-05 Score=89.66 Aligned_cols=35 Identities=40% Similarity=0.583 Sum_probs=32.9
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..+||+||||||||+++|..|++.|++|+|||+.+
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~ 161 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERA 161 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 35899999999999999999999999999999986
No 187
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.00 E-value=1.9e-05 Score=82.21 Aligned_cols=100 Identities=16% Similarity=0.156 Sum_probs=72.0
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+.... .+.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----------------------~~~---------------- 207 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP-----------------------SFD---------------- 207 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----------------------TSC----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh-----------------------hhh----------------
Confidence 45899999999999999999999999999998752111 000
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
..+.+.+.+.+++. +++++.++ |+++..+++.. +.+
T Consensus 208 ----------------------------------------~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~--~~v 244 (450)
T 1ges_A 208 ----------------------------------------PMISETLVEVMNAE-GPQLHTNAIPKAVVKNTDGS--LTL 244 (450)
T ss_dssp ----------------------------------------HHHHHHHHHHHHHH-SCEEECSCCEEEEEECTTSC--EEE
T ss_pred ----------------------------------------HHHHHHHHHHHHHC-CCEEEeCCEEEEEEEeCCcE--EEE
Confidence 01334445555554 89999997 98887654332 344
Q ss_pred EcCCCcEEEEEcCEEEEecCCCCcc
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
..++|++ +.+|.||.|+|..+..
T Consensus 245 ~~~~g~~--i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 245 ELEDGRS--ETVDCLIWAIGREPAN 267 (450)
T ss_dssp EETTSCE--EEESEEEECSCEEESC
T ss_pred EECCCcE--EEcCEEEECCCCCcCC
Confidence 4667874 5699999999987654
No 188
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.99 E-value=3.7e-05 Score=80.17 Aligned_cols=102 Identities=20% Similarity=0.303 Sum_probs=72.4
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.... .
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------~-------------- 208 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS---------------------------G-------------- 208 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST---------------------------T--------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc---------------------------c--------------
Confidence 46899999999999999999999999999998752110 0
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
+ ..++.+.+.+.+++. +++++.++ |+++..+++.+ .+++
T Consensus 209 -------------------------------------~-~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~~-~v~~ 248 (455)
T 1ebd_A 209 -------------------------------------F-EKQMAAIIKKRLKKK-GVEVVTNALAKGAEEREDGV-TVTY 248 (455)
T ss_dssp -------------------------------------S-CHHHHHHHHHHHHHT-TCEEEESEEEEEEEEETTEE-EEEE
T ss_pred -------------------------------------c-CHHHHHHHHHHHHHC-CCEEEeCCEEEEEEEeCCeE-EEEE
Confidence 0 012445555666665 89999986 88887766543 2443
Q ss_pred EcCCCcEEEEEcCEEEEecCCCCcc
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
.. +|+..++.+|.||.|+|.....
T Consensus 249 ~~-~g~~~~~~~D~vv~a~G~~p~~ 272 (455)
T 1ebd_A 249 EA-NGETKTIDADYVLVTVGRRPNT 272 (455)
T ss_dssp EE-TTEEEEEEESEEEECSCEEESC
T ss_pred Ee-CCceeEEEcCEEEECcCCCccc
Confidence 32 3333456799999999976543
No 189
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.98 E-value=4.4e-06 Score=85.65 Aligned_cols=39 Identities=36% Similarity=0.499 Sum_probs=35.2
Q ss_pred CCCCCcEEEECCChHHHHHHHHHhhC-CCcEEEEecCCCC
Q 040732 63 SVAGPDVIVVGAGVAGAALAHTLGTD-GRRVHVIERDMTQ 101 (541)
Q Consensus 63 ~~~~~dVvIVGaG~aGl~~A~~La~~-G~~V~viEr~~~~ 101 (541)
|+.++||+|||||++|+++|+.|+++ |.+|+|+|+++..
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 44578999999999999999999999 9999999998643
No 190
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.98 E-value=6.3e-05 Score=73.81 Aligned_cols=96 Identities=25% Similarity=0.278 Sum_probs=72.0
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+.... .
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------------------------~---------------- 182 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA-------------------------D---------------- 182 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCCS-------------------------C----------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccCc-------------------------c----------------
Confidence 35899999999999999999999999999998752100 0
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
..+.+.+.+..+++++.++ ++++..+++++.+|++
T Consensus 183 --------------------------------------------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~ 218 (310)
T 1fl2_A 183 --------------------------------------------QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEY 218 (310)
T ss_dssp --------------------------------------------HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEE
T ss_pred --------------------------------------------HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEE
Confidence 0122333443489999986 8888876667777887
Q ss_pred Ec-CCCcEEEEEcCEEEEecCCC
Q 040732 225 KT-KDGQEHKSYAPLTIVCDGGF 246 (541)
Q Consensus 225 ~~-~~g~~~~v~a~lvV~AdG~~ 246 (541)
.+ .+|++.++.+|.||.|.|..
T Consensus 219 ~~~~~g~~~~i~~D~vi~a~G~~ 241 (310)
T 1fl2_A 219 RDRVSGDIHNIELAGIFVQIGLL 241 (310)
T ss_dssp EETTTCCEEEEECSEEEECSCEE
T ss_pred EECCCCcEEEEEcCEEEEeeCCc
Confidence 65 45776678899999999853
No 191
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.96 E-value=5e-05 Score=76.36 Aligned_cols=100 Identities=22% Similarity=0.279 Sum_probs=74.1
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||+|..|+-+|..|++.|.+|+++++.+.... . +
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~------------------~-------~--------------- 202 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG------------------H-------G--------------- 202 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS------------------C-------S---------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC------------------C-------H---------------
Confidence 45899999999999999999999999999998752111 0 0
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
.+.+.|.+..++. +++++.++ ++++..+++++.+|.+
T Consensus 203 -----------------------------------------~~~~~l~~~~~~~-gv~i~~~~~v~~i~~~~~~v~~v~~ 240 (360)
T 3ab1_A 203 -----------------------------------------KTAHEVERARANG-TIDVYLETEVASIEESNGVLTRVHL 240 (360)
T ss_dssp -----------------------------------------HHHHSSHHHHHHT-SEEEESSEEEEEEEEETTEEEEEEE
T ss_pred -----------------------------------------HHHHHHHHHhhcC-ceEEEcCcCHHHhccCCCceEEEEE
Confidence 0112223333344 89999996 9999887777777777
Q ss_pred EcCCCcEEEEEcCEEEEecCCCC
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGFS 247 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~S 247 (541)
...+|+..++.+|.||.|+|...
T Consensus 241 ~~~~g~~~~i~~D~vi~a~G~~p 263 (360)
T 3ab1_A 241 RSSDGSKWTVEADRLLILIGFKS 263 (360)
T ss_dssp EETTCCEEEEECSEEEECCCBCC
T ss_pred EecCCCeEEEeCCEEEECCCCCC
Confidence 65577656678999999999654
No 192
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.95 E-value=6.5e-06 Score=86.72 Aligned_cols=38 Identities=32% Similarity=0.456 Sum_probs=34.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQ 101 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~ 101 (541)
+..+||+|||||++||++|+.|+++|++|+|+|+.+..
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 46 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRP 46 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCC
Confidence 45689999999999999999999999999999998743
No 193
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.94 E-value=0.00011 Score=72.10 Aligned_cols=96 Identities=17% Similarity=0.109 Sum_probs=70.7
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
...|+|||+|..|+-+|..|++.|.+|+++++.+.... .
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------------------------~---------------- 181 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRC-------------------------A---------------- 181 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCCS-------------------------C----------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccCC-------------------------C----------------
Confidence 46899999999999999999999999999998752100 0
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
..+.+.+.+..+++++.++ ++++..+++++.+|.+
T Consensus 182 --------------------------------------------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~ 217 (311)
T 2q0l_A 182 --------------------------------------------PITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSI 217 (311)
T ss_dssp --------------------------------------------HHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEE
T ss_pred --------------------------------------------HHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEE
Confidence 0012223333489999986 8888877666666776
Q ss_pred Ec-CCCcEEEEEcCEEEEecCCC
Q 040732 225 KT-KDGQEHKSYAPLTIVCDGGF 246 (541)
Q Consensus 225 ~~-~~g~~~~v~a~lvV~AdG~~ 246 (541)
.. .+|++.++.+|.||.|.|..
T Consensus 218 ~~~~~g~~~~i~~D~vi~a~G~~ 240 (311)
T 2q0l_A 218 KNTATNEKRELVVPGFFIFVGYD 240 (311)
T ss_dssp EETTTCCEEEEECSEEEECSCEE
T ss_pred EecCCCceEEEecCEEEEEecCc
Confidence 54 36776667899999999954
No 194
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.94 E-value=7.4e-06 Score=84.55 Aligned_cols=37 Identities=27% Similarity=0.417 Sum_probs=34.1
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCC-CcEEEEecCCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDG-RRVHVIERDMTQ 101 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G-~~V~viEr~~~~ 101 (541)
.++||+|||||++|+++|+.|+++| .+|+|+|+.+..
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHV 42 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCC
Confidence 5689999999999999999999999 899999998744
No 195
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.92 E-value=7e-06 Score=83.65 Aligned_cols=38 Identities=39% Similarity=0.670 Sum_probs=34.8
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQ 101 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~ 101 (541)
...+||+|||||++|+++|+.|+++|.+|+|+|+.+..
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 45789999999999999999999999999999998643
No 196
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.92 E-value=5.7e-05 Score=80.22 Aligned_cols=102 Identities=19% Similarity=0.232 Sum_probs=76.2
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhHh
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCVE 146 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~~ 146 (541)
.+|+|||||..|+-+|..|++.|.+|+++|+.+.... . +
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~------------------~-----~------------------ 253 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKL------------------I-----K------------------ 253 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT------------------C-----C------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccc------------------c-----c------------------
Confidence 6899999999999999999999999999998862111 0 0
Q ss_pred hccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeee-CCeEEEEEE
Q 040732 147 EIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEE-NGIVKGVHY 224 (541)
Q Consensus 147 ~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~-~~~v~gV~v 224 (541)
..++.+.|.+.+++. |++++.++ |+++..+ ++++.++.+
T Consensus 254 --------------------------------------~~~~~~~l~~~l~~~-GV~i~~~~~V~~i~~~~~~~v~~~~v 294 (523)
T 1mo9_A 254 --------------------------------------DNETRAYVLDRMKEQ-GMEIISGSNVTRIEEDANGRVQAVVA 294 (523)
T ss_dssp --------------------------------------SHHHHHHHHHHHHHT-TCEEESSCEEEEEEECTTSBEEEEEE
T ss_pred --------------------------------------cHHHHHHHHHHHHhC-CcEEEECCEEEEEEEcCCCceEEEEE
Confidence 012445566666666 89999996 8888764 344544666
Q ss_pred EcCCCcEEEEEcCEEEEecCCCCcc
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
.+++|+ .++.||.||.|+|..+..
T Consensus 295 ~~~~G~-~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 295 MTPNGE-MRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp EETTEE-EEEECSCEEECCCCEECC
T ss_pred EECCCc-EEEEcCEEEECcCCccCC
Confidence 677775 246799999999988765
No 197
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.90 E-value=6e-05 Score=78.88 Aligned_cols=103 Identities=17% Similarity=0.205 Sum_probs=72.1
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
...|+|||||..|+-+|..|++.|.+|+|+|+.+.... . +
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------~-----~----------------- 213 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP------------------T-----L----------------- 213 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------------------T-----S-----------------
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc------------------c-----C-----------------
Confidence 46899999999999999999999999999998862211 0 0
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHH-HcCCCeEEEeCe-EEEeeeeCCeEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKA-ASLPNVRMEEGT-VTSLFEENGIVKGVH 223 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~v~v~~~~-v~~l~~~~~~v~gV~ 223 (541)
..++.+.+.+.+ ++. +++++.++ |+++..+++.+ .|+
T Consensus 214 ---------------------------------------d~~~~~~l~~~l~~~~-gv~i~~~~~v~~i~~~~~~~-~v~ 252 (468)
T 2qae_A 214 ---------------------------------------DEDVTNALVGALAKNE-KMKFMTSTKVVGGTNNGDSV-SLE 252 (468)
T ss_dssp ---------------------------------------CHHHHHHHHHHHHHHT-CCEEECSCEEEEEEECSSSE-EEE
T ss_pred ---------------------------------------CHHHHHHHHHHHhhcC-CcEEEeCCEEEEEEEcCCeE-EEE
Confidence 012445555666 555 89999986 88887665432 344
Q ss_pred EEcCCCcEEEEEcCEEEEecCCCCcc
Q 040732 224 YKTKDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 224 v~~~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
+...+|+..++.+|.||.|.|.....
T Consensus 253 ~~~~~g~~~~i~~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 253 VEGKNGKRETVTCEALLVSVGRRPFT 278 (468)
T ss_dssp EECC---EEEEEESEEEECSCEEECC
T ss_pred EEcCCCceEEEECCEEEECCCcccCC
Confidence 43336654457799999999987654
No 198
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.90 E-value=3e-05 Score=80.40 Aligned_cols=32 Identities=28% Similarity=0.434 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHHhhCC--CcEEEEecCC
Q 040732 68 DVIVVGAGVAGAALAHTLGTDG--RRVHVIERDM 99 (541)
Q Consensus 68 dVvIVGaG~aGl~~A~~La~~G--~~V~viEr~~ 99 (541)
+|||||||+||+++|..|++.| .+|+|||+++
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCC
Confidence 5999999999999999999988 5799999976
No 199
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.90 E-value=5.6e-05 Score=79.32 Aligned_cols=105 Identities=15% Similarity=0.205 Sum_probs=73.9
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+.... .+.
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----------------------~~~---------------- 223 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA-----------------------SMD---------------- 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS-----------------------SSC----------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc-----------------------ccC----------------
Confidence 46899999999999999999999999999999862211 000
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeee-CCeEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEE-NGIVKGVH 223 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~-~~~v~gV~ 223 (541)
.++.+.+.+.+++. +++++.++ |+++..+ ++....|+
T Consensus 224 ----------------------------------------~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~~~~~v~ 262 (478)
T 1v59_A 224 ----------------------------------------GEVAKATQKFLKKQ-GLDFKLSTKVISAKRNDDKNVVEIV 262 (478)
T ss_dssp ----------------------------------------HHHHHHHHHHHHHT-TCEEECSEEEEEEEEETTTTEEEEE
T ss_pred ----------------------------------------HHHHHHHHHHHHHC-CCEEEeCCEEEEEEEecCCCeEEEE
Confidence 12445566666666 89999996 8888762 33333455
Q ss_pred EEc-CCCcEEEEEcCEEEEecCCCCccc
Q 040732 224 YKT-KDGQEHKSYAPLTIVCDGGFSNLR 250 (541)
Q Consensus 224 v~~-~~g~~~~v~a~lvV~AdG~~S~vR 250 (541)
+.. .+|+..++.+|.||.|+|......
T Consensus 263 ~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 263 VEDTKTNKQENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp EEETTTTEEEEEEESEEEECSCEEECCT
T ss_pred EEEcCCCCceEEECCEEEECCCCCcCCC
Confidence 432 234334567999999999776543
No 200
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.90 E-value=2.3e-05 Score=81.90 Aligned_cols=99 Identities=19% Similarity=0.232 Sum_probs=70.0
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.... .+.
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----------------------~~~---------------- 211 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP-----------------------TYD---------------- 211 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST-----------------------TSC----------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc-----------------------ccC----------------
Confidence 45899999999999999999999999999999862211 000
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
..+.+.+.+.+++. +++++.++ |+++.. +. +.+
T Consensus 212 ----------------------------------------~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~--~~---v~v 245 (458)
T 1lvl_A 212 ----------------------------------------SELTAPVAESLKKL-GIALHLGHSVEGYEN--GC---LLA 245 (458)
T ss_dssp ----------------------------------------HHHHHHHHHHHHHH-TCEEETTCEEEEEET--TE---EEE
T ss_pred ----------------------------------------HHHHHHHHHHHHHC-CCEEEECCEEEEEEe--CC---EEE
Confidence 01334444555554 89999986 888765 33 344
Q ss_pred EcCCCcEEEEEcCEEEEecCCCCcc
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
...+|+..++.+|.||.|+|.....
T Consensus 246 ~~~~G~~~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 246 NDGKGGQLRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp ECSSSCCCEECCSCEEECCCEEECC
T ss_pred EECCCceEEEECCEEEECcCCCcCC
Confidence 4455643346799999999976544
No 201
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.88 E-value=9.6e-05 Score=72.45 Aligned_cols=96 Identities=19% Similarity=0.196 Sum_probs=73.3
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
...|+|||+|+.|+-+|..|++.|.+|+++++.+.... .
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~------------------~----------------------- 185 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA------------------A----------------------- 185 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS------------------C-----------------------
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC------------------C-----------------------
Confidence 45899999999999999999999999999998752100 0
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
..+.+ +..++ .+++++.++ ++++..+++++.+|++
T Consensus 186 ----------------------------------------~~~~~---~~~~~-~gv~~~~~~~v~~i~~~~~~~~~v~~ 221 (315)
T 3r9u_A 186 ----------------------------------------PSTVE---KVKKN-EKIELITSASVDEVYGDKMGVAGVKV 221 (315)
T ss_dssp ----------------------------------------HHHHH---HHHHC-TTEEEECSCEEEEEEEETTEEEEEEE
T ss_pred ----------------------------------------HHHHH---HHHhc-CCeEEEeCcEEEEEEcCCCcEEEEEE
Confidence 01111 11233 389999886 9999888878888888
Q ss_pred EcCCCcEEEEEcCEEEEecCCC
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGF 246 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~ 246 (541)
...+|+..++.+|.||.|.|..
T Consensus 222 ~~~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 222 KLKDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp ECTTSCEEEECCSCEEECSCEE
T ss_pred EcCCCCeEEeecCeEEEEEcCC
Confidence 7668886678899999999953
No 202
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.88 E-value=5.8e-06 Score=87.83 Aligned_cols=37 Identities=38% Similarity=0.535 Sum_probs=33.8
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCC-CcEEEEecCCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDG-RRVHVIERDMTQ 101 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G-~~V~viEr~~~~ 101 (541)
..+||+|||||++||++|+.|+++| .+|+|+|++...
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~ri 44 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRV 44 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCC
Confidence 4579999999999999999999999 999999998743
No 203
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.87 E-value=0.00011 Score=72.93 Aligned_cols=96 Identities=16% Similarity=0.172 Sum_probs=71.9
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
...|+|||+|..|+-+|..|++.|.+|+++++.+.. . +
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~----------------------~-----~--------------- 210 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHL----------------------R-----A--------------- 210 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC----------------------C-----S---------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc----------------------C-----C---------------
Confidence 467999999999999999999999999999987511 0 0
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
. ..+.+.+.+..+++++.++ ++++..+++++.+|++
T Consensus 211 ---------------------------------------~----~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~ 247 (338)
T 3itj_A 211 ---------------------------------------S----TIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRI 247 (338)
T ss_dssp ---------------------------------------C----HHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEE
T ss_pred ---------------------------------------C----HHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEE
Confidence 0 1122333333489999987 8888887777777887
Q ss_pred Ec-CCCcEEEEEcCEEEEecCCC
Q 040732 225 KT-KDGQEHKSYAPLTIVCDGGF 246 (541)
Q Consensus 225 ~~-~~g~~~~v~a~lvV~AdG~~ 246 (541)
.+ .+|+..++.+|.||.|.|..
T Consensus 248 ~~~~~g~~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 248 KNTKKNEETDLPVSGLFYAIGHT 270 (338)
T ss_dssp EETTTTEEEEEECSEEEECSCEE
T ss_pred EECCCCceEEEEeCEEEEEeCCC
Confidence 65 34555667899999999954
No 204
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.84 E-value=0.00014 Score=76.62 Aligned_cols=101 Identities=23% Similarity=0.268 Sum_probs=73.2
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||..|+-+|..|++.|.+|+++|+.+.... . +.
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~------------------~-----~d---------------- 214 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVAN------------------L-----QD---------------- 214 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTT------------------C-----CC----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc------------------c-----CC----------------
Confidence 46899999999999999999999999999999863211 0 00
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
.++.+.+.+.+++. ++++.++ |+++..+++.+. +++
T Consensus 215 ----------------------------------------~~~~~~l~~~l~~~--V~i~~~~~v~~i~~~~~~v~-v~~ 251 (492)
T 3ic9_A 215 ----------------------------------------EEMKRYAEKTFNEE--FYFDAKARVISTIEKEDAVE-VIY 251 (492)
T ss_dssp ----------------------------------------HHHHHHHHHHHHTT--SEEETTCEEEEEEECSSSEE-EEE
T ss_pred ----------------------------------------HHHHHHHHHHHhhC--cEEEECCEEEEEEEcCCEEE-EEE
Confidence 02445555555543 8999887 888877665443 444
Q ss_pred EcCCCcEEEEEcCEEEEecCCCCc
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
...+|++.++.+|.||.|.|....
T Consensus 252 ~~~~G~~~~i~~D~Vi~a~G~~p~ 275 (492)
T 3ic9_A 252 FDKSGQKTTESFQYVLAATGRKAN 275 (492)
T ss_dssp ECTTCCEEEEEESEEEECSCCEES
T ss_pred EeCCCceEEEECCEEEEeeCCccC
Confidence 434776556789999999997644
No 205
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.83 E-value=6.3e-05 Score=79.01 Aligned_cols=101 Identities=18% Similarity=0.182 Sum_probs=70.9
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||..|+-+|..|++.|.+|+++|+.+.... .+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-----------------------~~d---------------- 225 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR-----------------------KFD---------------- 225 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT-----------------------TSC----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc-----------------------ccC----------------
Confidence 45899999999999999999999999999998862111 000
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCe-EEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGI-VKGVH 223 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~-v~gV~ 223 (541)
.++.+.+.+.+++. |++++.++ |+++..+++. + +.
T Consensus 226 ----------------------------------------~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~~--~~ 262 (479)
T 2hqm_A 226 ----------------------------------------ECIQNTITDHYVKE-GINVHKLSKIVKVEKNVETDK--LK 262 (479)
T ss_dssp ----------------------------------------HHHHHHHHHHHHHH-TCEEECSCCEEEEEECC-CCC--EE
T ss_pred ----------------------------------------HHHHHHHHHHHHhC-CeEEEeCCEEEEEEEcCCCcE--EE
Confidence 01333444445444 89999997 8888765332 2 33
Q ss_pred EEcCCCcEEEEEcCEEEEecCCCCcc
Q 040732 224 YKTKDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 224 v~~~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
+..++|+ .++.+|.||.|.|.....
T Consensus 263 v~~~~G~-~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 263 IHMNDSK-SIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp EEETTSC-EEEEESEEEECSCEEECC
T ss_pred EEECCCc-EEEEcCEEEECCCCCCcc
Confidence 4456773 246799999999976654
No 206
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.83 E-value=8.9e-05 Score=76.69 Aligned_cols=100 Identities=21% Similarity=0.230 Sum_probs=72.1
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||..|+-+|..|++.|.+|+++|+.+.... +. +
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~------------------~~----~----------------- 189 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLE------------------RV----T----------------- 189 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT------------------TT----S-----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc------------------ch----h-----------------
Confidence 46899999999999999999999999999998752211 00 0
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeee--eCCeEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFE--ENGIVKGV 222 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~--~~~~v~gV 222 (541)
...+.+.+.+.+++. |++++.++ |+++.. +++++.+|
T Consensus 190 ---------------------------------------~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~~v~~v 229 (431)
T 1q1r_A 190 ---------------------------------------APPVSAFYEHLHREA-GVDIRTGTQVCGFEMSTDQQKVTAV 229 (431)
T ss_dssp ---------------------------------------CHHHHHHHHHHHHHH-TCEEECSCCEEEEEECTTTCCEEEE
T ss_pred ---------------------------------------hHHHHHHHHHHHHhC-CeEEEeCCEEEEEEeccCCCcEEEE
Confidence 012334445555555 89999996 888876 45555445
Q ss_pred EEEcCCCcEEEEEcCEEEEecCCCCc
Q 040732 223 HYKTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 223 ~v~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
+ .++|+. +.+|.||.|.|....
T Consensus 230 ~--~~~G~~--i~~D~Vv~a~G~~p~ 251 (431)
T 1q1r_A 230 L--CEDGTR--LPADLVIAGIGLIPN 251 (431)
T ss_dssp E--ETTSCE--EECSEEEECCCEEEC
T ss_pred E--eCCCCE--EEcCEEEECCCCCcC
Confidence 4 567765 559999999997654
No 207
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.83 E-value=8.1e-06 Score=85.03 Aligned_cols=37 Identities=41% Similarity=0.451 Sum_probs=33.9
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQ 101 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~ 101 (541)
.++||+|||||++|+++|+.|+++|++|+|+|+....
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 40 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRV 40 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 3579999999999999999999999999999998644
No 208
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.82 E-value=8.1e-05 Score=77.77 Aligned_cols=101 Identities=22% Similarity=0.233 Sum_probs=71.0
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+.... . +.
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------~-----~~---------------- 211 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP------------------N-----ED---------------- 211 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------------------T-----SC----------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc------------------c-----cC----------------
Confidence 46899999999999999999999999999999862111 0 00
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
.++.+.+.+.+++. +++++.++ |+++..+++.+ .+++
T Consensus 212 ----------------------------------------~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~~-~v~~ 249 (464)
T 2a8x_A 212 ----------------------------------------ADVSKEIEKQFKKL-GVTILTATKVESIADGGSQV-TVTV 249 (464)
T ss_dssp ----------------------------------------HHHHHHHHHHHHHH-TCEEECSCEEEEEEECSSCE-EEEE
T ss_pred ----------------------------------------HHHHHHHHHHHHHc-CCEEEeCcEEEEEEEcCCeE-EEEE
Confidence 01334444555554 89999986 88887655432 2333
Q ss_pred EcCCCcEEEEEcCEEEEecCCCCc
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
. .+|+..++.+|.||.|.|....
T Consensus 250 ~-~~g~~~~~~~D~vv~a~G~~p~ 272 (464)
T 2a8x_A 250 T-KDGVAQELKAEKVLQAIGFAPN 272 (464)
T ss_dssp E-SSSCEEEEEESEEEECSCEEEC
T ss_pred E-cCCceEEEEcCEEEECCCCCcc
Confidence 2 2565455779999999997654
No 209
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.82 E-value=0.00014 Score=76.62 Aligned_cols=103 Identities=20% Similarity=0.299 Sum_probs=74.3
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+.... . +.
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------~-----~d---------------- 238 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG------------------G-----MD---------------- 238 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS------------------S-----SC----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc------------------c-----CC----------------
Confidence 45899999999999999999999999999998762211 0 00
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
.++.+.+.+.+++. +++++.++ |+++..+++.+ .|.+
T Consensus 239 ----------------------------------------~~~~~~l~~~l~~~-gV~v~~~~~v~~i~~~~~~~-~v~~ 276 (491)
T 3urh_A 239 ----------------------------------------GEVAKQLQRMLTKQ-GIDFKLGAKVTGAVKSGDGA-KVTF 276 (491)
T ss_dssp ----------------------------------------HHHHHHHHHHHHHT-TCEEECSEEEEEEEEETTEE-EEEE
T ss_pred ----------------------------------------HHHHHHHHHHHHhC-CCEEEECCeEEEEEEeCCEE-EEEE
Confidence 12445555666665 89999997 88888776643 3555
Q ss_pred EcC-CCcEEEEEcCEEEEecCCCCcc
Q 040732 225 KTK-DGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 225 ~~~-~g~~~~v~a~lvV~AdG~~S~v 249 (541)
.+. +|+..++.+|.||.|+|.....
T Consensus 277 ~~~~~g~~~~i~~D~Vi~a~G~~p~~ 302 (491)
T 3urh_A 277 EPVKGGEATTLDAEVVLIATGRKPST 302 (491)
T ss_dssp EETTSCCCEEEEESEEEECCCCEECC
T ss_pred EecCCCceEEEEcCEEEEeeCCccCC
Confidence 443 2644557799999999976443
No 210
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.82 E-value=8.9e-05 Score=77.36 Aligned_cols=147 Identities=14% Similarity=0.105 Sum_probs=83.6
Q ss_pred CCcEEEECCChHHHHHHHHHhhC--CCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchh
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTD--GRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDD 143 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~--G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~ 143 (541)
..+|+|||||.+|+=+|..|++. |.+|++++|.+........ ....+...|.....+..+.-..
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~--------------~~~~~~~~p~~~~~~~~l~~~~ 292 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDS--------------PFVNEVFAPKFTDLIYSREHAE 292 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCC--------------HHHHGGGSHHHHHHHHHSCHHH
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCC--------------ccchhccChhHHHHHhcCCHHH
Confidence 46899999999999999999998 8999999998743221000 1222334444444444443221
Q ss_pred hHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEE
Q 040732 144 CVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGV 222 (541)
Q Consensus 144 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV 222 (541)
...-... . ....+.. .. .. +-..-....+.+.+....+++++.++ |+++..+++.+ .|
T Consensus 293 ~~~~~~~-----------~--~~~~~~~--~~----~~-~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~-~v 351 (463)
T 3s5w_A 293 RERLLRE-----------Y--HNTNYSV--VD----TD-LIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGI-EL 351 (463)
T ss_dssp HHHHHHH-----------T--GGGTSSC--BC----HH-HHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEE-EE
T ss_pred HHHHHHH-----------h--hccCCCc--CC----HH-HHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEE-EE
Confidence 1000000 0 0000000 00 00 00111223334445554689999998 88888776643 35
Q ss_pred EEEcC-CCcEEEEEcCEEEEecCCCC
Q 040732 223 HYKTK-DGQEHKSYAPLTIVCDGGFS 247 (541)
Q Consensus 223 ~v~~~-~g~~~~v~a~lvV~AdG~~S 247 (541)
++... +|+..++.+|.||.|+|...
T Consensus 352 ~~~~~~~g~~~~~~~D~Vv~AtG~~p 377 (463)
T 3s5w_A 352 ALRDAGSGELSVETYDAVILATGYER 377 (463)
T ss_dssp EEEETTTCCEEEEEESEEEECCCEEC
T ss_pred EEEEcCCCCeEEEECCEEEEeeCCCC
Confidence 55433 77776788999999999643
No 211
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.82 E-value=7.7e-06 Score=86.30 Aligned_cols=34 Identities=26% Similarity=0.405 Sum_probs=32.3
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
+|||+||||||+|+++|..|++.|.+|+|+|+++
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 5899999999999999999999999999999964
No 212
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.81 E-value=0.0001 Score=77.78 Aligned_cols=101 Identities=15% Similarity=0.164 Sum_probs=73.2
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+.... .+ .
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-----------------------~~-------------d--- 216 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR-----------------------KF-------------D--- 216 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT-----------------------TS-------------C---
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc-----------------------cc-------------c---
Confidence 45899999999999999999999999999998762111 00 0
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
.++.+.+.+.+++. +++++.++ |+++..+++.. +.+
T Consensus 217 ----------------------------------------~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~~--~~v 253 (500)
T 1onf_A 217 ----------------------------------------ESVINVLENDMKKN-NINIVTFADVVEIKKVSDKN--LSI 253 (500)
T ss_dssp ----------------------------------------HHHHHHHHHHHHHT-TCEEECSCCEEEEEESSTTC--EEE
T ss_pred ----------------------------------------hhhHHHHHHHHHhC-CCEEEECCEEEEEEEcCCce--EEE
Confidence 12334455556655 89999997 88887654321 344
Q ss_pred EcCCCcEEEEEcCEEEEecCCCCcc
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
..++|++ ++.+|.||.|.|.....
T Consensus 254 ~~~~g~~-~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 254 HLSDGRI-YEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp EETTSCE-EEEESEEEECCCBCCTT
T ss_pred EECCCcE-EEECCEEEECCCCCcCC
Confidence 4567875 35699999999987654
No 213
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.81 E-value=0.00012 Score=72.13 Aligned_cols=96 Identities=23% Similarity=0.296 Sum_probs=70.3
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||..|+-+|..|++.|.+|+++++.+....
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~------------------------------------------ 192 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC------------------------------------------ 192 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC------------------------------------------
Confidence 35799999999999999999999999999998641100
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
. ..+.+ .+.+. +++++.++ ++++..+++++.+|.+
T Consensus 193 ----------------~-----------------------~~l~~----~l~~~-gv~i~~~~~v~~i~~~~~~v~~v~~ 228 (319)
T 3cty_A 193 ----------------E-----------------------NAYVQ----EIKKR-NIPYIMNAQVTEIVGDGKKVTGVKY 228 (319)
T ss_dssp ----------------C-----------------------HHHHH----HHHHT-TCCEECSEEEEEEEESSSSEEEEEE
T ss_pred ----------------C-----------------------HHHHH----HHhcC-CcEEEcCCeEEEEecCCceEEEEEE
Confidence 0 01222 22233 89999887 8888876665667777
Q ss_pred Ec-CCCcEEEEEcCEEEEecCCCC
Q 040732 225 KT-KDGQEHKSYAPLTIVCDGGFS 247 (541)
Q Consensus 225 ~~-~~g~~~~v~a~lvV~AdG~~S 247 (541)
.. .+|+..++.+|.||.|+|...
T Consensus 229 ~~~~~g~~~~i~~D~vi~a~G~~p 252 (319)
T 3cty_A 229 KDRTTGEEKLIETDGVFIYVGLIP 252 (319)
T ss_dssp EETTTCCEEEECCSEEEECCCEEE
T ss_pred EEcCCCceEEEecCEEEEeeCCcc
Confidence 64 467766688999999998543
No 214
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.81 E-value=1.1e-05 Score=84.31 Aligned_cols=35 Identities=34% Similarity=0.531 Sum_probs=33.0
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERD 98 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~ 98 (541)
+.++||+|||||++|+++|..|++.|.+|+|||+.
T Consensus 2 ~~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (463)
T 2r9z_A 2 TQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK 36 (463)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC
Confidence 35689999999999999999999999999999997
No 215
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.78 E-value=0.00022 Score=70.67 Aligned_cols=99 Identities=14% Similarity=0.143 Sum_probs=72.1
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||+|..|+-+|..|++.|.+|+++++.+.... .
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~------------------~----------------------- 190 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA------------------H----------------------- 190 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS------------------C-----------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc------------------c-----------------------
Confidence 46899999999999999999999999999998752111 0
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
..+.+.|.+.+++. +++++.++ ++++.. ++++.+|++
T Consensus 191 ----------------------------------------~~~~~~l~~~l~~~-gv~v~~~~~v~~i~~-~~~~~~v~~ 228 (335)
T 2zbw_A 191 ----------------------------------------EASVKELMKAHEEG-RLEVLTPYELRRVEG-DERVRWAVV 228 (335)
T ss_dssp ----------------------------------------HHHHHHHHHHHHTT-SSEEETTEEEEEEEE-SSSEEEEEE
T ss_pred ----------------------------------------HHHHHHHHhccccC-CeEEecCCcceeEcc-CCCeeEEEE
Confidence 00122344555555 89999996 888876 455556776
Q ss_pred EcC-CCcEEEEEcCEEEEecCCCC
Q 040732 225 KTK-DGQEHKSYAPLTIVCDGGFS 247 (541)
Q Consensus 225 ~~~-~g~~~~v~a~lvV~AdG~~S 247 (541)
... +|+..++.+|.||.|.|...
T Consensus 229 ~~~~~g~~~~i~~D~vi~a~G~~p 252 (335)
T 2zbw_A 229 FHNQTQEELALEVDAVLILAGYIT 252 (335)
T ss_dssp EETTTCCEEEEECSEEEECCCEEE
T ss_pred EECCCCceEEEecCEEEEeecCCC
Confidence 543 67655678999999999654
No 216
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.78 E-value=0.00011 Score=76.86 Aligned_cols=103 Identities=17% Similarity=0.142 Sum_probs=72.2
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+.... +.
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------~~---------------------- 217 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG------------------VG---------------------- 217 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC------------------SS----------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC------------------cc----------------------
Confidence 45899999999999999999999999999999862211 00
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
+ ..++.+.+.+.+++. +++++.++ |+++..+++....+++
T Consensus 218 -------------------------------------~-~~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~~~v~~ 258 (474)
T 1zmd_A 218 -------------------------------------I-DMEISKNFQRILQKQ-GFKFKLNTKVTGATKKSDGKIDVSI 258 (474)
T ss_dssp -------------------------------------C-CHHHHHHHHHHHHHT-TCEEECSEEEEEEEECTTSCEEEEE
T ss_pred -------------------------------------c-CHHHHHHHHHHHHHC-CCEEEeCceEEEEEEcCCceEEEEE
Confidence 0 012445556666665 89999997 8888776543123443
Q ss_pred E---cCCCcEEEEEcCEEEEecCCCCcc
Q 040732 225 K---TKDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 225 ~---~~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
. +.+++ ++.+|.||.|+|.....
T Consensus 259 ~~~~~~~~~--~i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 259 EAASGGKAE--VITCDVLLVCIGRRPFT 284 (474)
T ss_dssp EETTSCCCE--EEEESEEEECSCEEECC
T ss_pred EecCCCCce--EEEcCEEEECcCCCcCC
Confidence 3 23343 46699999999976543
No 217
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.78 E-value=1.3e-05 Score=81.07 Aligned_cols=35 Identities=37% Similarity=0.488 Sum_probs=32.6
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQ 101 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~ 101 (541)
+||+|||||++|+++|+.|+++|.+|+|+|+++..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 69999999999999999999999999999998643
No 218
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.78 E-value=1.1e-05 Score=84.00 Aligned_cols=35 Identities=26% Similarity=0.388 Sum_probs=32.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERD 98 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~ 98 (541)
+.++||+|||||++|+++|..|++.|.+|+|||++
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (450)
T 1ges_A 2 TKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK 36 (450)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC
Confidence 34689999999999999999999999999999997
No 219
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.78 E-value=9.7e-05 Score=77.96 Aligned_cols=99 Identities=21% Similarity=0.223 Sum_probs=73.8
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
...|+|||||..|+-+|..|++.|.+|+++|+.+.... . +
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~------------------~-----~----------------- 221 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLP------------------Y-----E----------------- 221 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSC------------------C-----S-----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc------------------c-----c-----------------
Confidence 46899999999999999999999999999998862211 0 0
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
..++.+.+.+.+++. |++++.++ |+++..+++. +.+
T Consensus 222 ---------------------------------------d~~~~~~l~~~l~~~-GV~i~~~~~V~~i~~~~~~---v~v 258 (499)
T 1xdi_A 222 ---------------------------------------DADAALVLEESFAER-GVRLFKNARAASVTRTGAG---VLV 258 (499)
T ss_dssp ---------------------------------------SHHHHHHHHHHHHHT-TCEEETTCCEEEEEECSSS---EEE
T ss_pred ---------------------------------------CHHHHHHHHHHHHHC-CCEEEeCCEEEEEEEeCCE---EEE
Confidence 012445556666666 89999997 9998876553 445
Q ss_pred EcCCCcEEEEEcCEEEEecCCCCcc
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
.+.+|++ +.+|.||.|.|.....
T Consensus 259 ~~~~g~~--i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 259 TMTDGRT--VEGSHALMTIGSVPNT 281 (499)
T ss_dssp EETTSCE--EEESEEEECCCEEECC
T ss_pred EECCCcE--EEcCEEEECCCCCcCC
Confidence 5667765 4599999999987654
No 220
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.77 E-value=6.9e-05 Score=78.76 Aligned_cols=101 Identities=13% Similarity=0.147 Sum_probs=71.6
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+.... . +
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~------------------~-----~----------------- 224 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ------------------G-----A----------------- 224 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST------------------T-----S-----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc------------------c-----c-----------------
Confidence 46899999999999999999999999999999862211 0 0
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
..++.+.+.+.+++. +|+++.++ |+++..+++. ..|++
T Consensus 225 ---------------------------------------~~~~~~~l~~~l~~~-gV~i~~~~~v~~i~~~~~~-~~v~~ 263 (482)
T 1ojt_A 225 ---------------------------------------DRDLVKVWQKQNEYR-FDNIMVNTKTVAVEPKEDG-VYVTF 263 (482)
T ss_dssp ---------------------------------------CHHHHHHHHHHHGGG-EEEEECSCEEEEEEEETTE-EEEEE
T ss_pred ---------------------------------------CHHHHHHHHHHHHhc-CCEEEECCEEEEEEEcCCe-EEEEE
Confidence 012444555666665 89999996 8888776553 23444
Q ss_pred Ec-CC-CcEEEEEcCEEEEecCCCCcc
Q 040732 225 KT-KD-GQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 225 ~~-~~-g~~~~v~a~lvV~AdG~~S~v 249 (541)
.+ .+ |++ +.+|.||.|.|...+.
T Consensus 264 ~~~~~~g~~--~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 264 EGANAPKEP--QRYDAVLVAAGRAPNG 288 (482)
T ss_dssp ESSSCCSSC--EEESCEEECCCEEECG
T ss_pred eccCCCceE--EEcCEEEECcCCCcCC
Confidence 32 11 554 4599999999987654
No 221
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.77 E-value=0.00029 Score=69.58 Aligned_cols=95 Identities=23% Similarity=0.267 Sum_probs=69.4
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||+|..|+-+|..|++.|.+|+++++.+.... .
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------------------------~---------------- 190 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA-------------------------N---------------- 190 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS-------------------------C----------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc-------------------------c----------------
Confidence 35899999999999999999999999999998752100 0
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
..+.+.+.+..+++++.++ ++++..+ +++.+|.+
T Consensus 191 --------------------------------------------~~~~~~l~~~~gv~i~~~~~v~~i~~~-~~v~~v~~ 225 (325)
T 2q7v_A 191 --------------------------------------------KVAQARAFANPKMKFIWDTAVEEIQGA-DSVSGVKL 225 (325)
T ss_dssp --------------------------------------------HHHHHHHHTCTTEEEECSEEEEEEEES-SSEEEEEE
T ss_pred --------------------------------------------hHHHHHHHhcCCceEecCCceEEEccC-CcEEEEEE
Confidence 0112233333489999887 8888764 55666777
Q ss_pred Ec-CCCcEEEEEcCEEEEecCCC
Q 040732 225 KT-KDGQEHKSYAPLTIVCDGGF 246 (541)
Q Consensus 225 ~~-~~g~~~~v~a~lvV~AdG~~ 246 (541)
.. .+|+..++.+|.||.|.|..
T Consensus 226 ~~~~~g~~~~i~~D~vi~a~G~~ 248 (325)
T 2q7v_A 226 RNLKTGEVSELATDGVFIFIGHV 248 (325)
T ss_dssp EETTTCCEEEEECSEEEECSCEE
T ss_pred EECCCCcEEEEEcCEEEEccCCC
Confidence 54 46776667899999999854
No 222
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.77 E-value=3.8e-05 Score=80.40 Aligned_cols=103 Identities=17% Similarity=0.235 Sum_probs=73.1
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+.... . +
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~------------------~-----~----------------- 216 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP------------------T-----M----------------- 216 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST------------------T-----S-----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc------------------c-----c-----------------
Confidence 46899999999999999999999999999999862211 0 0
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
..++.+.+.+.+++. +++++.++ |+++..+++.+ .+++
T Consensus 217 ---------------------------------------~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~~-~v~~ 255 (470)
T 1dxl_A 217 ---------------------------------------DAEIRKQFQRSLEKQ-GMKFKLKTKVVGVDTSGDGV-KLTV 255 (470)
T ss_dssp ---------------------------------------CHHHHHHHHHHHHHS-SCCEECSEEEEEEECSSSSE-EEEE
T ss_pred ---------------------------------------cHHHHHHHHHHHHHc-CCEEEeCCEEEEEEEcCCeE-EEEE
Confidence 012445556666665 89999987 88887655432 3444
Q ss_pred EcC-CCcEEEEEcCEEEEecCCCCcc
Q 040732 225 KTK-DGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 225 ~~~-~g~~~~v~a~lvV~AdG~~S~v 249 (541)
... +|+..++.+|.||.|+|.....
T Consensus 256 ~~~~~g~~~~~~~D~vv~a~G~~p~~ 281 (470)
T 1dxl_A 256 EPSAGGEQTIIEADVVLVSAGRTPFT 281 (470)
T ss_dssp EESSSCCCEEEEESEEECCCCEEECC
T ss_pred EecCCCcceEEECCEEEECCCCCcCC
Confidence 322 4543456799999999976543
No 223
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.77 E-value=0.00017 Score=75.00 Aligned_cols=100 Identities=20% Similarity=0.315 Sum_probs=72.6
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||..|+-+|..|++.|.+|+++|+.+.... +. +.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------~~----~~---------------- 190 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLY------------------KY----FD---------------- 190 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTT------------------TT----SC----------------
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhh------------------hh----hh----------------
Confidence 45799999999999999999999999999998762211 00 00
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
.++.+.+.+.+++. +++++.++ |+++..+++++..+.
T Consensus 191 ----------------------------------------~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~v~~v~- 228 (452)
T 2cdu_A 191 ----------------------------------------KEFTDILAKDYEAH-GVNLVLGSKVAAFEEVDDEIITKT- 228 (452)
T ss_dssp ----------------------------------------HHHHHHHHHHHHHT-TCEEEESSCEEEEEEETTEEEEEE-
T ss_pred ----------------------------------------hhHHHHHHHHHHHC-CCEEEcCCeeEEEEcCCCeEEEEE-
Confidence 12445555666666 89999997 999886666554343
Q ss_pred EcCCCcEEEEEcCEEEEecCCCCcc
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
. +|++ +.+|.||.|+|.....
T Consensus 229 -~-~g~~--i~~D~vv~a~G~~p~~ 249 (452)
T 2cdu_A 229 -L-DGKE--IKSDIAILCIGFRPNT 249 (452)
T ss_dssp -T-TSCE--EEESEEEECCCEEECC
T ss_pred -e-CCCE--EECCEEEECcCCCCCH
Confidence 3 6664 5599999999976553
No 224
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.75 E-value=2.1e-05 Score=80.17 Aligned_cols=36 Identities=31% Similarity=0.661 Sum_probs=33.4
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQ 101 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~ 101 (541)
++||+|||||++|+++|..|+++|.+|+|+|+++..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHI 38 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCc
Confidence 479999999999999999999999999999998644
No 225
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.75 E-value=0.00027 Score=74.07 Aligned_cols=101 Identities=22% Similarity=0.215 Sum_probs=72.7
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||..|+-+|..|++.|.+|+++|+.+.... .+
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----------------------~~----------------- 219 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP-----------------------AV----------------- 219 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-----------------------TS-----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc-----------------------cc-----------------
Confidence 45899999999999999999999999999999752111 00
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
..++.+.+.+.+++. +++++.++ |+++..+++.+ .+.+
T Consensus 220 ---------------------------------------~~~~~~~l~~~l~~~-Gv~v~~~~~v~~i~~~~~~~-~v~~ 258 (476)
T 3lad_A 220 ---------------------------------------DEQVAKEAQKILTKQ-GLKILLGARVTGTEVKNKQV-TVKF 258 (476)
T ss_dssp ---------------------------------------CHHHHHHHHHHHHHT-TEEEEETCEEEEEEECSSCE-EEEE
T ss_pred ---------------------------------------CHHHHHHHHHHHHhC-CCEEEECCEEEEEEEcCCEE-EEEE
Confidence 012445555556555 89999986 88887766543 3555
Q ss_pred EcCCCcEEEEEcCEEEEecCCCCc
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
.+.+| ..++.+|.||.|.|....
T Consensus 259 ~~~~g-~~~~~~D~vi~a~G~~p~ 281 (476)
T 3lad_A 259 VDAEG-EKSQAFDKLIVAVGRRPV 281 (476)
T ss_dssp ESSSE-EEEEEESEEEECSCEEEC
T ss_pred EeCCC-cEEEECCEEEEeeCCccc
Confidence 44445 345779999999996543
No 226
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.72 E-value=0.00021 Score=73.28 Aligned_cols=95 Identities=26% Similarity=0.311 Sum_probs=69.5
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||..|+-+|..|++.|.+|+++|+.+.... +. +
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------~~----~----------------- 185 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMS------------------RA----A----------------- 185 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST------------------TT----S-----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc------------------cc----c-----------------
Confidence 46899999999999999999999999999999862211 00 0
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
..++.+.+.+.+++. +++++.++ |+++. ++ +|+
T Consensus 186 ---------------------------------------~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~--~~---~v~- 219 (408)
T 2gqw_A 186 ---------------------------------------PATLADFVARYHAAQ-GVDLRFERSVTGSV--DG---VVL- 219 (408)
T ss_dssp ---------------------------------------CHHHHHHHHHHHHHT-TCEEEESCCEEEEE--TT---EEE-
T ss_pred ---------------------------------------CHHHHHHHHHHHHHc-CcEEEeCCEEEEEE--CC---EEE-
Confidence 012444555556665 89999996 88887 33 333
Q ss_pred EcCCCcEEEEEcCEEEEecCCCCc
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
.++|++ +.+|.||.|.|....
T Consensus 220 -~~~g~~--i~~D~vi~a~G~~p~ 240 (408)
T 2gqw_A 220 -LDDGTR--IAADMVVVGIGVLAN 240 (408)
T ss_dssp -ETTSCE--EECSEEEECSCEEEC
T ss_pred -ECCCCE--EEcCEEEECcCCCcc
Confidence 467765 559999999997654
No 227
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.72 E-value=8.4e-05 Score=76.35 Aligned_cols=99 Identities=26% Similarity=0.373 Sum_probs=71.4
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||..|+-+|..|++.|.+|+++|+.+.... + .+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~------------------~----~~----------------- 183 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLV------------------R----VL----------------- 183 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSH------------------H----HH-----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccch------------------h----hc-----------------
Confidence 46899999999999999999999999999998862110 0 00
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
...+.+.+.+.+++. |++++.++ |+++..++ ++.+|
T Consensus 184 ---------------------------------------~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~-~~~~v-- 220 (410)
T 3ef6_A 184 ---------------------------------------GRRIGAWLRGLLTEL-GVQVELGTGVVGFSGEG-QLEQV-- 220 (410)
T ss_dssp ---------------------------------------CHHHHHHHHHHHHHH-TCEEECSCCEEEEECSS-SCCEE--
T ss_pred ---------------------------------------CHHHHHHHHHHHHHC-CCEEEeCCEEEEEeccC-cEEEE--
Confidence 012444555555555 89999887 88887644 33334
Q ss_pred EcCCCcEEEEEcCEEEEecCCCCc
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
.+++|++ +.||.||.|.|....
T Consensus 221 ~~~dg~~--i~aD~Vv~a~G~~p~ 242 (410)
T 3ef6_A 221 MASDGRS--FVADSALICVGAEPA 242 (410)
T ss_dssp EETTSCE--EECSEEEECSCEEEC
T ss_pred EECCCCE--EEcCEEEEeeCCeec
Confidence 4677875 459999999998765
No 228
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.72 E-value=2.7e-05 Score=81.19 Aligned_cols=37 Identities=43% Similarity=0.500 Sum_probs=34.1
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
...+||+||||||+|+++|..|++.|++|+|+|+.+.
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~ 156 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDR 156 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCC
Confidence 4568999999999999999999999999999999863
No 229
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.71 E-value=2.1e-05 Score=83.03 Aligned_cols=38 Identities=34% Similarity=0.503 Sum_probs=34.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQ 101 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~ 101 (541)
...+||+|||||++|+++|+.|+++|.+|+|+|+.+..
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~ 68 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERP 68 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCC
Confidence 45689999999999999999999999999999998643
No 230
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.71 E-value=0.00038 Score=68.87 Aligned_cols=97 Identities=19% Similarity=0.239 Sum_probs=70.0
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhh
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDC 144 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~ 144 (541)
...+|+|||+|..|+-+|..|++.|.+|+++++.+....
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~----------------------------------------- 196 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA----------------------------------------- 196 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS-----------------------------------------
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc-----------------------------------------
Confidence 346899999999999999999999999999998751100
Q ss_pred HhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCC--eEEE
Q 040732 145 VEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENG--IVKG 221 (541)
Q Consensus 145 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~--~v~g 221 (541)
. ..+.+.+.+..+++++.++ ++++..+++ ++.+
T Consensus 197 ----------------------------------------~----~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~ 232 (333)
T 1vdc_A 197 ----------------------------------------S----KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGG 232 (333)
T ss_dssp ----------------------------------------C----HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEE
T ss_pred ----------------------------------------c----HHHHHHHHhCCCeeEecCCceEEEeCCCCccceee
Confidence 0 0111222223489999886 888876654 6666
Q ss_pred EEEEc-CCCcEEEEEcCEEEEecCCC
Q 040732 222 VHYKT-KDGQEHKSYAPLTIVCDGGF 246 (541)
Q Consensus 222 V~v~~-~~g~~~~v~a~lvV~AdG~~ 246 (541)
|.+.+ .+|+..++.+|.||.|.|..
T Consensus 233 v~~~~~~~g~~~~i~~D~vi~a~G~~ 258 (333)
T 1vdc_A 233 LKVKNVVTGDVSDLKVSGLFFAIGHE 258 (333)
T ss_dssp EEEEETTTCCEEEEECSEEEECSCEE
T ss_pred EEEEecCCCceEEEecCEEEEEeCCc
Confidence 77764 36665667899999999954
No 231
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.71 E-value=0.00014 Score=76.49 Aligned_cols=100 Identities=12% Similarity=0.161 Sum_probs=73.1
Q ss_pred CCcEEEECCChHHHHHHHHHhhC---CCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCch
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTD---GRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLD 142 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~---G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~ 142 (541)
..+|+|||||..|+-+|..|++. |.+|+|+|+.+.... . +
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~------------------~-----~-------------- 229 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILR------------------G-----F-------------- 229 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSST------------------T-----S--------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccc------------------c-----c--------------
Confidence 45899999999999999999999 999999999862111 0 0
Q ss_pred hhHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEE
Q 040732 143 DCVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKG 221 (541)
Q Consensus 143 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~g 221 (541)
..++.+.+.+.+++. +++++.++ |+++..+++..
T Consensus 230 ------------------------------------------d~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~-- 264 (490)
T 1fec_A 230 ------------------------------------------DSELRKQLTEQLRAN-GINVRTHENPAKVTKNADGT-- 264 (490)
T ss_dssp ------------------------------------------CHHHHHHHHHHHHHT-TEEEEETCCEEEEEECTTSC--
T ss_pred ------------------------------------------CHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEcCCCE--
Confidence 012445556666665 89999997 99987665432
Q ss_pred EEEEcCCCcEEEEEcCEEEEecCCCCcc
Q 040732 222 VHYKTKDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 222 V~v~~~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
+.+..++|++ +.+|.||.|.|.....
T Consensus 265 ~~v~~~~G~~--i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 265 RHVVFESGAE--ADYDVVMLAIGRVPRS 290 (490)
T ss_dssp EEEEETTSCE--EEESEEEECSCEEESC
T ss_pred EEEEECCCcE--EEcCEEEEccCCCcCc
Confidence 3344567864 5699999999976543
No 232
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.70 E-value=0.00025 Score=73.74 Aligned_cols=99 Identities=18% Similarity=0.165 Sum_probs=72.8
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||..|+-+|..|++.|.+|+++|+.+.... +.
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------~~---------------------- 186 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLP------------------KY---------------------- 186 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST------------------TT----------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccc------------------cc----------------------
Confidence 45799999999999999999999999999999862211 00
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
+ ..++.+.+.+.+++. +++++.++ |+++..+++++ .+
T Consensus 187 -------------------------------------~-d~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~v---~v 224 (452)
T 3oc4_A 187 -------------------------------------F-DKEMVAEVQKSLEKQ-AVIFHFEETVLGIEETANGI---VL 224 (452)
T ss_dssp -------------------------------------C-CHHHHHHHHHHHHTT-TEEEEETCCEEEEEECSSCE---EE
T ss_pred -------------------------------------C-CHHHHHHHHHHHHHc-CCEEEeCCEEEEEEccCCeE---EE
Confidence 0 012555666666666 99999987 99988666654 33
Q ss_pred EcCCCcEEEEEcCEEEEecCCCCcc
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
.+++| ++.+|.||.|.|.....
T Consensus 225 ~~~~g---~i~aD~Vv~A~G~~p~~ 246 (452)
T 3oc4_A 225 ETSEQ---EISCDSGIFALNLHPQL 246 (452)
T ss_dssp EESSC---EEEESEEEECSCCBCCC
T ss_pred EECCC---EEEeCEEEECcCCCCCh
Confidence 34555 36699999999986543
No 233
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.69 E-value=0.00015 Score=76.49 Aligned_cols=100 Identities=12% Similarity=0.161 Sum_probs=72.3
Q ss_pred CCcEEEECCChHHHHHHHHHhhC---CCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCch
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTD---GRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLD 142 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~---G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~ 142 (541)
...|+|||||..|+-+|..|++. |.+|+|+|+.+.... . + .
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~------------------~-----~-------------d 234 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR------------------G-----F-------------D 234 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT------------------T-----S-------------C
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc------------------c-----c-------------C
Confidence 45899999999999999999999 999999998762111 0 0 0
Q ss_pred hhHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEE
Q 040732 143 DCVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKG 221 (541)
Q Consensus 143 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~g 221 (541)
.++.+.+.+.+++. +++++.++ |+++..+++..
T Consensus 235 -------------------------------------------~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~-- 268 (495)
T 2wpf_A 235 -------------------------------------------ETIREEVTKQLTAN-GIEIMTNENPAKVSLNTDGS-- 268 (495)
T ss_dssp -------------------------------------------HHHHHHHHHHHHHT-TCEEEESCCEEEEEECTTSC--
T ss_pred -------------------------------------------HHHHHHHHHHHHhC-CCEEEeCCEEEEEEEcCCce--
Confidence 12344555556565 89999997 98887664432
Q ss_pred EEEEcCCCcEEEEEcCEEEEecCCCCcc
Q 040732 222 VHYKTKDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 222 V~v~~~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
+.+..++|++ +.+|.||.|.|.....
T Consensus 269 ~~v~~~~G~~--i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 269 KHVTFESGKT--LDVDVVMMAIGRIPRT 294 (495)
T ss_dssp EEEEETTSCE--EEESEEEECSCEEECC
T ss_pred EEEEECCCcE--EEcCEEEECCCCcccc
Confidence 3344567874 5699999999976554
No 234
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.69 E-value=0.00027 Score=74.37 Aligned_cols=99 Identities=24% Similarity=0.269 Sum_probs=71.2
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhh
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDC 144 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~ 144 (541)
...+|+|||||..|+-+|..|++.|.+|+|+|+.+.... +. +
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~------------------~~----~---------------- 234 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLA------------------GY----Y---------------- 234 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT------------------TT----S----------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhh------------------hH----H----------------
Confidence 346899999999999999999999999999999862211 00 0
Q ss_pred HhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEE
Q 040732 145 VEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVH 223 (541)
Q Consensus 145 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~ 223 (541)
..++.+.+.+.+++. +++++.++ |+++.. ++++..|.
T Consensus 235 ----------------------------------------~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~-~~~v~~v~ 272 (490)
T 2bc0_A 235 ----------------------------------------DRDLTDLMAKNMEEH-GIQLAFGETVKEVAG-NGKVEKII 272 (490)
T ss_dssp ----------------------------------------CHHHHHHHHHHHHTT-TCEEEETCCEEEEEC-SSSCCEEE
T ss_pred ----------------------------------------HHHHHHHHHHHHHhC-CeEEEeCCEEEEEEc-CCcEEEEE
Confidence 012445566666666 89999987 888876 44333343
Q ss_pred EEcCCCcEEEEEcCEEEEecCCCCc
Q 040732 224 YKTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 224 v~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
. +|++ +.+|.||.|.|....
T Consensus 273 ~---~g~~--i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 273 T---DKNE--YDVDMVILAVGFRPN 292 (490)
T ss_dssp E---SSCE--EECSEEEECCCEEEC
T ss_pred E---CCcE--EECCEEEECCCCCcC
Confidence 2 5654 569999999997654
No 235
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.69 E-value=0.00026 Score=75.91 Aligned_cols=34 Identities=24% Similarity=0.324 Sum_probs=31.8
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..+|+|||||..|+-+|..|++.|.+|+++|+.+
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 184 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELAD 184 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCC
Confidence 3489999999999999999999999999999986
No 236
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.68 E-value=3.3e-05 Score=81.22 Aligned_cols=37 Identities=30% Similarity=0.481 Sum_probs=33.8
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCC-CcEEEEecCCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDG-RRVHVIERDMTQ 101 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G-~~V~viEr~~~~ 101 (541)
..+||+|||||++|+++|+.|+++| .+|+|+|+.+..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 4689999999999999999999999 799999998744
No 237
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.67 E-value=2.9e-05 Score=82.09 Aligned_cols=34 Identities=29% Similarity=0.475 Sum_probs=32.3
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
++||+|||||++|+++|..|++.|.+|+|+|+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4899999999999999999999999999999974
No 238
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.66 E-value=3.1e-05 Score=85.19 Aligned_cols=37 Identities=35% Similarity=0.485 Sum_probs=34.4
Q ss_pred CCCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 63 SVAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 63 ~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
...++||+|||||++|+++|+.|+++|++|+|+|+.+
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~ 424 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGR 424 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 4567899999999999999999999999999999986
No 239
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.66 E-value=2.6e-05 Score=83.36 Aligned_cols=59 Identities=17% Similarity=0.254 Sum_probs=44.6
Q ss_pred HHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcC-CCcE--EEE-EcCEEEEecCCCCc
Q 040732 190 QRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTK-DGQE--HKS-YAPLTIVCDGGFSN 248 (541)
Q Consensus 190 ~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~-~g~~--~~v-~a~lvV~AdG~~S~ 248 (541)
..+.+.+.+.+|+++..++ |+++..+++++.||++... +|+. .++ .++.||.|.|....
T Consensus 199 ~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~s 262 (546)
T 1kdg_A 199 ATYLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGT 262 (546)
T ss_dssp HTHHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcC
Confidence 4455666666799999997 9999988888999998653 4652 223 68999999999654
No 240
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.64 E-value=0.00051 Score=72.18 Aligned_cols=102 Identities=16% Similarity=0.154 Sum_probs=71.6
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||..|+-+|..|++.|.+|+++++....+. +
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~~------------------------~----------------- 223 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRG------------------------F----------------- 223 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT------------------------S-----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccccc------------------------C-----------------
Confidence 45799999999999999999999999999998531100 0
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
..++.+.+.+.+++. +++++.++ ++++...++....|++
T Consensus 224 ---------------------------------------d~~~~~~l~~~l~~~-gv~~~~~~~v~~i~~~~~~~~~v~~ 263 (488)
T 3dgz_A 224 ---------------------------------------DQQMSSLVTEHMESH-GTQFLKGCVPSHIKKLPTNQLQVTW 263 (488)
T ss_dssp ---------------------------------------CHHHHHHHHHHHHHT-TCEEEETEEEEEEEECTTSCEEEEE
T ss_pred ---------------------------------------CHHHHHHHHHHHHHC-CCEEEeCCEEEEEEEcCCCcEEEEE
Confidence 012444555555555 89999996 8888764433233555
Q ss_pred EcC-CCcEEEEEcCEEEEecCCCCc
Q 040732 225 KTK-DGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 225 ~~~-~g~~~~v~a~lvV~AdG~~S~ 248 (541)
... +|+..++.+|.||.|.|....
T Consensus 264 ~~~~~g~~~~~~~D~vi~a~G~~p~ 288 (488)
T 3dgz_A 264 EDHASGKEDTGTFDTVLWAIGRVPE 288 (488)
T ss_dssp EETTTTEEEEEEESEEEECSCEEES
T ss_pred EeCCCCeeEEEECCEEEEcccCCcc
Confidence 443 366556789999999996543
No 241
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.62 E-value=0.0003 Score=73.64 Aligned_cols=99 Identities=25% Similarity=0.271 Sum_probs=73.4
Q ss_pred CCcEEEECCChHHHHHHHHHhhC-CCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhh
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTD-GRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDC 144 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~-G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~ 144 (541)
..+|+|||||..|+-+|..|++. |.+|+++|+.+.... +.
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~------------------~~--------------------- 199 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMP------------------GF--------------------- 199 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSST------------------TT---------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccc------------------cc---------------------
Confidence 46899999999999999999999 999999998752111 00
Q ss_pred HhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEE
Q 040732 145 VEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVH 223 (541)
Q Consensus 145 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~ 223 (541)
+ ...+.+.|.+.+++. +++++.++ |+++..+++.+.
T Consensus 200 --------------------------------------~-~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~v~--- 236 (472)
T 3iwa_A 200 --------------------------------------T-SKSLSQMLRHDLEKN-DVVVHTGEKVVRLEGENGKVA--- 236 (472)
T ss_dssp --------------------------------------S-CHHHHHHHHHHHHHT-TCEEECSCCEEEEEESSSBEE---
T ss_pred --------------------------------------c-CHHHHHHHHHHHHhc-CCEEEeCCEEEEEEccCCeEE---
Confidence 0 012555666666665 89999996 999887666543
Q ss_pred EEcCCCcEEEEEcCEEEEecCCCCc
Q 040732 224 YKTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 224 v~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
+..++|++ +.+|.||.|+|....
T Consensus 237 v~~~~g~~--i~aD~Vv~a~G~~p~ 259 (472)
T 3iwa_A 237 RVITDKRT--LDADLVILAAGVSPN 259 (472)
T ss_dssp EEEESSCE--EECSEEEECSCEEEC
T ss_pred EEEeCCCE--EEcCEEEECCCCCcC
Confidence 44567764 559999999998654
No 242
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.62 E-value=4e-05 Score=78.00 Aligned_cols=36 Identities=22% Similarity=0.350 Sum_probs=31.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCC--CcEEEEecCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDG--RRVHVIERDM 99 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G--~~V~viEr~~ 99 (541)
+.++||+|||||++|+++|..|++.| .+|+|+|++.
T Consensus 2 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 2 SERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp --CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 34689999999999999999999999 5699999875
No 243
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.61 E-value=0.00031 Score=74.49 Aligned_cols=96 Identities=25% Similarity=0.281 Sum_probs=72.6
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||..|+-+|..|++.|.+|+++++.+....
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~------------------------------------------ 392 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA------------------------------------------ 392 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc------------------------------------------
Confidence 45899999999999999999999999999998751100
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
+ ..+.+.+.+.++++++.++ ++++..+++++.+|.+
T Consensus 393 ----------------~---------------------------~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~ 429 (521)
T 1hyu_A 393 ----------------D---------------------------QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEY 429 (521)
T ss_dssp ----------------C---------------------------HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEE
T ss_pred ----------------C---------------------------HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEE
Confidence 0 1123334444589999997 8888776677777887
Q ss_pred Ec-CCCcEEEEEcCEEEEecCCC
Q 040732 225 KT-KDGQEHKSYAPLTIVCDGGF 246 (541)
Q Consensus 225 ~~-~~g~~~~v~a~lvV~AdG~~ 246 (541)
.+ .+|++.++.+|.||.|.|..
T Consensus 430 ~~~~~g~~~~i~~D~vi~a~G~~ 452 (521)
T 1hyu_A 430 RDRVSGDIHSVALAGIFVQIGLL 452 (521)
T ss_dssp EETTTCCEEEEECSEEEECCCEE
T ss_pred EeCCCCceEEEEcCEEEECcCCC
Confidence 65 46776678899999999943
No 244
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.60 E-value=0.00034 Score=73.41 Aligned_cols=98 Identities=23% Similarity=0.326 Sum_probs=70.5
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhh
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDC 144 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~ 144 (541)
...+|+|||||++|+-+|..|++.|.+|+|+|+.+.... .+
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----------------------~~---------------- 225 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT-----------------------IY---------------- 225 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS-----------------------SS----------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh-----------------------cC----------------
Confidence 457899999999999999999999999999998752100 00
Q ss_pred HhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEE
Q 040732 145 VEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVH 223 (541)
Q Consensus 145 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~ 223 (541)
..++.+.+.+.+++. +++++.++ |+++..+ +++..+.
T Consensus 226 ----------------------------------------~~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~-~~v~~v~ 263 (480)
T 3cgb_A 226 ----------------------------------------DGDMAEYIYKEADKH-HIEILTNENVKAFKGN-ERVEAVE 263 (480)
T ss_dssp ----------------------------------------CHHHHHHHHHHHHHT-TCEEECSCCEEEEEES-SBEEEEE
T ss_pred ----------------------------------------CHHHHHHHHHHHHHc-CcEEEcCCEEEEEEcC-CcEEEEE
Confidence 012445566666666 89999886 8888754 4443343
Q ss_pred EEcCCCcEEEEEcCEEEEecCCCCc
Q 040732 224 YKTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 224 v~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
.+ +. ++.+|.||.|+|....
T Consensus 264 --~~-~~--~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 264 --TD-KG--TYKADLVLVSVGVKPN 283 (480)
T ss_dssp --ET-TE--EEECSEEEECSCEEES
T ss_pred --EC-CC--EEEcCEEEECcCCCcC
Confidence 33 33 3669999999997654
No 245
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.57 E-value=0.00032 Score=73.84 Aligned_cols=99 Identities=23% Similarity=0.260 Sum_probs=70.9
Q ss_pred CCcEEEECCChHHHHHHHHHhh----CCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCc
Q 040732 66 GPDVIVVGAGVAGAALAHTLGT----DGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGL 141 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~----~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl 141 (541)
..+|+|||||..|+-+|..|++ .|.+|+++++.+.... +. +.
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~------------------~~----l~------------ 225 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMG------------------KI----LP------------ 225 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTT------------------TT----SC------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccc------------------cc----CC------------
Confidence 4579999999999999999986 4788999987642111 00 00
Q ss_pred hhhHhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEE
Q 040732 142 DDCVEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVK 220 (541)
Q Consensus 142 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~ 220 (541)
..+.+.+.+.+++. +|+++.++ |+++..+++.
T Consensus 226 --------------------------------------------~~~~~~~~~~l~~~-GV~v~~~~~V~~i~~~~~~-- 258 (493)
T 1m6i_A 226 --------------------------------------------EYLSNWTMEKVRRE-GVKVMPNAIVQSVGVSSGK-- 258 (493)
T ss_dssp --------------------------------------------HHHHHHHHHHHHTT-TCEEECSCCEEEEEEETTE--
T ss_pred --------------------------------------------HHHHHHHHHHHHhc-CCEEEeCCEEEEEEecCCe--
Confidence 12444555666666 89999996 9888766654
Q ss_pred EEEEEcCCCcEEEEEcCEEEEecCCCCc
Q 040732 221 GVHYKTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 221 gV~v~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
+.+.+.+|++ +.||.||.|.|....
T Consensus 259 -~~v~l~dG~~--i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 259 -LLIKLKDGRK--VETDHIVAAVGLEPN 283 (493)
T ss_dssp -EEEEETTSCE--EEESEEEECCCEEEC
T ss_pred -EEEEECCCCE--EECCEEEECCCCCcc
Confidence 3455678875 559999999997654
No 246
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.56 E-value=0.00051 Score=72.09 Aligned_cols=102 Identities=19% Similarity=0.155 Sum_probs=71.7
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||..|+-+|..|++.|.+|+++++....+. +.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~------------------------~d---------------- 226 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLRG------------------------FD---------------- 226 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSSTT------------------------SC----------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCcc------------------------cC----------------
Confidence 45799999999999999999999999999997421100 00
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
.++.+.+.+.+++. +++++.++ |+++..+++....|++
T Consensus 227 ----------------------------------------~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~~~v~~ 265 (483)
T 3dgh_A 227 ----------------------------------------QQMAELVAASMEER-GIPFLRKTVPLSVEKQDDGKLLVKY 265 (483)
T ss_dssp ----------------------------------------HHHHHHHHHHHHHT-TCCEEETEEEEEEEECTTSCEEEEE
T ss_pred ----------------------------------------HHHHHHHHHHHHhC-CCEEEeCCEEEEEEEcCCCcEEEEE
Confidence 12444555556665 89999997 8888765443223555
Q ss_pred EcC-CCcEEEEEcCEEEEecCCCCc
Q 040732 225 KTK-DGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 225 ~~~-~g~~~~v~a~lvV~AdG~~S~ 248 (541)
.+. +|+..++.+|.||.|.|....
T Consensus 266 ~~~~~~~~~~~~~D~vi~a~G~~p~ 290 (483)
T 3dgh_A 266 KNVETGEESEDVYDTVLWAIGRKGL 290 (483)
T ss_dssp EETTTCCEEEEEESEEEECSCEEEC
T ss_pred ecCCCCceeEEEcCEEEECcccccC
Confidence 443 355556789999999997543
No 247
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.55 E-value=0.0007 Score=71.84 Aligned_cols=99 Identities=15% Similarity=0.154 Sum_probs=73.6
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhh
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDC 144 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~ 144 (541)
.+-.++|||||+.|+=+|..+++.|.+|+|+++....+.
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~----------------------------------------- 260 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRG----------------------------------------- 260 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTT-----------------------------------------
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEEecccccccc-----------------------------------------
Confidence 346899999999999999999999999999987531111
Q ss_pred HhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEE
Q 040732 145 VEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVH 223 (541)
Q Consensus 145 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~ 223 (541)
++ .++.+.+.+.+++. ++.++.+. +.++...++. +.
T Consensus 261 --------------------------------------~D-~ei~~~l~~~l~~~-gi~~~~~~~v~~~~~~~~~---~~ 297 (542)
T 4b1b_A 261 --------------------------------------FD-QQCAVKVKLYMEEQ-GVMFKNGILPKKLTKMDDK---IL 297 (542)
T ss_dssp --------------------------------------SC-HHHHHHHHHHHHHT-TCEEEETCCEEEEEEETTE---EE
T ss_pred --------------------------------------cc-hhHHHHHHHHHHhh-cceeecceEEEEEEecCCe---EE
Confidence 00 12445556666666 89999997 8888887774 45
Q ss_pred EEcCCCcEEEEEcCEEEEecCCCCcc
Q 040732 224 YKTKDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 224 v~~~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
+...+++... +|.|+.|.|..-++
T Consensus 298 v~~~~~~~~~--~D~vLvAvGR~Pnt 321 (542)
T 4b1b_A 298 VEFSDKTSEL--YDTVLYAIGRKGDI 321 (542)
T ss_dssp EEETTSCEEE--ESEEEECSCEEESC
T ss_pred EEEcCCCeEE--EEEEEEcccccCCc
Confidence 5566776544 89999999976554
No 248
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.54 E-value=0.00059 Score=71.49 Aligned_cols=34 Identities=24% Similarity=0.356 Sum_probs=31.8
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
...|+|||||..|+-+|..|++.|.+|+++++.+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 220 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD 220 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCC
Confidence 4589999999999999999999999999999875
No 249
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.52 E-value=0.00027 Score=71.40 Aligned_cols=33 Identities=33% Similarity=0.598 Sum_probs=31.4
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.+|+|||||++|+-+|..|++.|.+|+++|+.+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 176 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA 176 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 589999999999999999999999999999875
No 250
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.51 E-value=0.00042 Score=72.29 Aligned_cols=98 Identities=14% Similarity=0.195 Sum_probs=72.6
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||..|+-+|..|++.|.+|+++|+.+.... . +
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~------------------~-----~----------------- 209 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILS------------------R-----F----------------- 209 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------------------T-----S-----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc------------------c-----c-----------------
Confidence 56899999999999999999999999999998752111 0 0
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
..++.+.+.+.+++. +++++.++ |+++..+++.. +.+
T Consensus 210 ---------------------------------------~~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~--~~v 247 (463)
T 4dna_A 210 ---------------------------------------DQDMRRGLHAAMEEK-GIRILCEDIIQSVSADADGR--RVA 247 (463)
T ss_dssp ---------------------------------------CHHHHHHHHHHHHHT-TCEEECSCCEEEEEECTTSC--EEE
T ss_pred ---------------------------------------CHHHHHHHHHHHHHC-CCEEECCCEEEEEEEcCCCE--EEE
Confidence 012445556666665 89999986 99988765432 345
Q ss_pred E-cCCCcEEEEEcCEEEEecCCCCc
Q 040732 225 K-TKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 225 ~-~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
. +++|+ +.+|.||.|.|....
T Consensus 248 ~~~~~g~---i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 248 TTMKHGE---IVADQVMLALGRMPN 269 (463)
T ss_dssp EESSSCE---EEESEEEECSCEEES
T ss_pred EEcCCCe---EEeCEEEEeeCcccC
Confidence 5 67775 569999999997654
No 251
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.50 E-value=7.2e-05 Score=82.71 Aligned_cols=37 Identities=30% Similarity=0.453 Sum_probs=34.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
...+||+|||||+||+++|..|+++|++|+|+|+.+.
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~ 423 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEK 423 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 4568999999999999999999999999999999864
No 252
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.49 E-value=0.00075 Score=66.17 Aligned_cols=97 Identities=23% Similarity=0.196 Sum_probs=70.4
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhh
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDC 144 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~ 144 (541)
...+|+|||+|..|+-+|..|++.|.+|+++++.+.... .
T Consensus 153 ~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~-------------------------~--------------- 192 (323)
T 3f8d_A 153 KNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA-------------------------Q--------------- 192 (323)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS-------------------------C---------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc-------------------------C---------------
Confidence 346899999999999999999999999999998752110 0
Q ss_pred HhhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEE
Q 040732 145 VEEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVH 223 (541)
Q Consensus 145 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~ 223 (541)
..+ .+.+.+..+++++.++ ++++..+ +++.+|+
T Consensus 193 -----------------------------------------~~~----~~~~~~~~gv~~~~~~~v~~i~~~-~~~~~v~ 226 (323)
T 3f8d_A 193 -----------------------------------------PIY----VETVKKKPNVEFVLNSVVKEIKGD-KVVKQVV 226 (323)
T ss_dssp -----------------------------------------HHH----HHHHHTCTTEEEECSEEEEEEEES-SSEEEEE
T ss_pred -----------------------------------------HHH----HHHHHhCCCcEEEeCCEEEEEecc-CceeEEE
Confidence 001 1223333489999997 8888765 4555677
Q ss_pred EEc-CCCcEEEEEcCEEEEecCCCC
Q 040732 224 YKT-KDGQEHKSYAPLTIVCDGGFS 247 (541)
Q Consensus 224 v~~-~~g~~~~v~a~lvV~AdG~~S 247 (541)
+.+ .+|+..++.+|.||.|.|...
T Consensus 227 ~~~~~~g~~~~~~~D~vv~a~G~~p 251 (323)
T 3f8d_A 227 VENLKTGEIKELNVNGVFIEIGFDP 251 (323)
T ss_dssp EEETTTCCEEEEECSEEEECCCEEC
T ss_pred EEECCCCceEEEEcCEEEEEECCCC
Confidence 654 457766678999999999543
No 253
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.48 E-value=0.0011 Score=70.19 Aligned_cols=33 Identities=30% Similarity=0.283 Sum_probs=30.6
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERD 98 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~ 98 (541)
...|+|||||..|+-+|..|++.|.+|+|+++.
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 346999999999999999999999999999985
No 254
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.48 E-value=3.5e-05 Score=82.05 Aligned_cols=49 Identities=24% Similarity=0.379 Sum_probs=39.6
Q ss_pred CCCeEEEeCe-EEEeeeeCC---eEEEEEEEcCCCcEEEE---EcCEEEEecCCCC
Q 040732 199 LPNVRMEEGT-VTSLFEENG---IVKGVHYKTKDGQEHKS---YAPLTIVCDGGFS 247 (541)
Q Consensus 199 ~~~v~v~~~~-v~~l~~~~~---~v~gV~v~~~~g~~~~v---~a~lvV~AdG~~S 247 (541)
.+|+++..++ |+++..+++ +++||++...+|+..++ .++-||.|.|+..
T Consensus 206 ~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~ 261 (536)
T 1ju2_A 206 SNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIG 261 (536)
T ss_dssp TTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHH
T ss_pred CCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccC
Confidence 4599999997 999987653 79999998767876555 4789999999874
No 255
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.47 E-value=7.6e-05 Score=78.17 Aligned_cols=37 Identities=38% Similarity=0.600 Sum_probs=32.7
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDMTQ 101 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~~~ 101 (541)
..+||+|||||++|+++|+.|++.|. +|+|+|+.+..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~ 40 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHI 40 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCC
Confidence 45799999999999999999999999 89999998643
No 256
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.47 E-value=0.00049 Score=71.87 Aligned_cols=97 Identities=18% Similarity=0.182 Sum_probs=70.8
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||..|+-+|..|++.|.+|+++|+.+.. .. +.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~----------------------l~--~~---------------- 215 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLF----------------------FR--ED---------------- 215 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT----------------------TT--SC----------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCcc----------------------CC--CC----------------
Confidence 458999999999999999999999999999987521 00 00
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
.++.+.+.+.+++. |++++.++ |+++..+++. +.+
T Consensus 216 ----------------------------------------~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~---~~v 251 (467)
T 1zk7_A 216 ----------------------------------------PAIGEAVTAAFRAE-GIEVLEHTQASQVAHMDGE---FVL 251 (467)
T ss_dssp ----------------------------------------HHHHHHHHHHHHHT-TCEEETTCCEEEEEEETTE---EEE
T ss_pred ----------------------------------------HHHHHHHHHHHHhC-CCEEEcCCEEEEEEEeCCE---EEE
Confidence 12445556666666 89999986 9988876553 233
Q ss_pred EcCCCcEEEEEcCEEEEecCCCCcc
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGFSNL 249 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~S~v 249 (541)
.++ +. ++.+|.||.|.|.....
T Consensus 252 ~~~-~~--~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 252 TTT-HG--ELRADKLLVATGRTPNT 273 (467)
T ss_dssp EET-TE--EEEESEEEECSCEEESC
T ss_pred EEC-Cc--EEEcCEEEECCCCCcCC
Confidence 344 33 36699999999987654
No 257
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.47 E-value=0.0012 Score=71.20 Aligned_cols=33 Identities=27% Similarity=0.317 Sum_probs=30.8
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERD 98 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~ 98 (541)
.-+|+|||||..|+-+|..|++.|.+|+|+|+.
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 347999999999999999999999999999986
No 258
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.46 E-value=0.0001 Score=80.84 Aligned_cols=36 Identities=33% Similarity=0.496 Sum_probs=33.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
...+||+|||||+||+++|..|++.|++|+|+|+.+
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~ 406 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHS 406 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 456899999999999999999999999999999986
No 259
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.44 E-value=6.5e-05 Score=79.18 Aligned_cols=39 Identities=23% Similarity=0.394 Sum_probs=34.2
Q ss_pred CCCCCcEEEECCChHHHHHHHHHhhC--CCcEEEEecCCCC
Q 040732 63 SVAGPDVIVVGAGVAGAALAHTLGTD--GRRVHVIERDMTQ 101 (541)
Q Consensus 63 ~~~~~dVvIVGaG~aGl~~A~~La~~--G~~V~viEr~~~~ 101 (541)
++..+||||||||+||+++|..|+++ |.+|+|||+.+..
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPEL 48 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSC
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 45678999999999999999999876 8999999998643
No 260
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.42 E-value=0.00011 Score=80.21 Aligned_cols=39 Identities=31% Similarity=0.424 Sum_probs=35.1
Q ss_pred CCCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCC
Q 040732 63 SVAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQ 101 (541)
Q Consensus 63 ~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~ 101 (541)
....+||+|||||++|+++|+.|++.|++|+|+|+.+..
T Consensus 104 ~~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 104 TKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 142 (662)
T ss_dssp SSCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 346689999999999999999999999999999998643
No 261
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.38 E-value=0.00091 Score=72.00 Aligned_cols=96 Identities=19% Similarity=0.223 Sum_probs=70.3
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhH
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCV 145 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~ 145 (541)
..+|+|||||..|+-+|..|++.|.+|+++|+.+.... . +
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------~-----~----------------- 226 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMP------------------P-----I----------------- 226 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT------------------T-----S-----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccc------------------c-----C-----------------
Confidence 45899999999999999999999999999998752211 0 0
Q ss_pred hhccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 146 EEIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 146 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
..++.+.+.+.+++. +++++.++ |+++..+++ +|.
T Consensus 227 ---------------------------------------~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~---~v~- 262 (588)
T 3ics_A 227 ---------------------------------------DYEMAAYVHEHMKNH-DVELVFEDGVDALEENGA---VVR- 262 (588)
T ss_dssp ---------------------------------------CHHHHHHHHHHHHHT-TCEEECSCCEEEEEGGGT---EEE-
T ss_pred ---------------------------------------CHHHHHHHHHHHHHc-CCEEEECCeEEEEecCCC---EEE-
Confidence 012344555555555 89999987 888876544 233
Q ss_pred EcCCCcEEEEEcCEEEEecCCCCc
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~S~ 248 (541)
.++|++ +.+|.||.|.|....
T Consensus 263 -~~~g~~--i~~D~Vi~a~G~~p~ 283 (588)
T 3ics_A 263 -LKSGSV--IQTDMLILAIGVQPE 283 (588)
T ss_dssp -ETTSCE--EECSEEEECSCEEEC
T ss_pred -ECCCCE--EEcCEEEEccCCCCC
Confidence 467765 559999999998654
No 262
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.38 E-value=0.00015 Score=80.88 Aligned_cols=38 Identities=32% Similarity=0.422 Sum_probs=34.7
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQ 101 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~ 101 (541)
...+||+|||||++||++|+.|+++|++|+|+|+....
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~ 313 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 313 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcC
Confidence 45689999999999999999999999999999998643
No 263
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.38 E-value=0.001 Score=69.45 Aligned_cols=34 Identities=29% Similarity=0.473 Sum_probs=31.9
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
...|+|||||..|+-+|..|++.|.+|+++|+.+
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 205 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLD 205 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC
Confidence 4589999999999999999999999999999876
No 264
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.36 E-value=0.00075 Score=66.95 Aligned_cols=34 Identities=26% Similarity=0.346 Sum_probs=31.6
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..+|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~ 188 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRD 188 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCC
Confidence 4689999999999999999999999999999875
No 265
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.35 E-value=9.2e-05 Score=77.12 Aligned_cols=36 Identities=22% Similarity=0.146 Sum_probs=32.9
Q ss_pred CCCcEEEECCChHHHHHHHHHhh-C------CCcEEEEecCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGT-D------GRRVHVIERDMT 100 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~-~------G~~V~viEr~~~ 100 (541)
.++||+||||||+|+.+|..|++ . |.+|+|||+.+.
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~ 44 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 44 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCC
Confidence 35799999999999999999999 7 999999999863
No 266
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.32 E-value=0.0014 Score=65.81 Aligned_cols=104 Identities=18% Similarity=0.191 Sum_probs=67.7
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCCCcCCcceeeeeccccccccccccccCchhhHHHHHCCchhhHh
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPDRIDGRRVHVIERDLMEPNRIVGELLQPGGYLKLVELGLDDCVE 146 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~lgl~~~~~ 146 (541)
.+|+|||||.+|+-+|..|++.|.+|+++|+.+.... +. . +
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~--------------------------~~-------~------d 207 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLND--------------------------PD-------A------D 207 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC-------------------------------------------------
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCC--------------------------CC-------C------C
Confidence 4899999999999999999999999999998752111 00 0 0
Q ss_pred hccceeeeeeEEEECCeeeeecCCCCCCCCCccceeecchHHHHHHHHHHHcCCC-eEEEeCe-EEEeeeeCCeEEEEEE
Q 040732 147 EIDAHPVVGYALFKDGKITKTPYPLGNFQANVAGRSFHNGRFIQRMREKAASLPN-VRMEEGT-VTSLFEENGIVKGVHY 224 (541)
Q Consensus 147 ~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-v~v~~~~-v~~l~~~~~~v~gV~v 224 (541)
.. .. + ...+.+.+.+.+++. + ++++.++ |+++..+++. +.+
T Consensus 208 ---------------~~---~~--------------~-~~~~~~~l~~~l~~~-g~v~~~~~~~v~~i~~~~~~---~~v 250 (369)
T 3d1c_A 208 ---------------PS---VR--------------L-SPYTRQRLGNVIKQG-ARIEMNVHYTVKDIDFNNGQ---YHI 250 (369)
T ss_dssp ---------------CT---TS--------------C-CHHHHHHHHHHHHTT-CCEEEECSCCEEEEEEETTE---EEE
T ss_pred ---------------CC---cc--------------C-CHHHHHHHHHHHhhC-CcEEEecCcEEEEEEecCCc---eEE
Confidence 00 00 0 012445555555555 5 9999886 8888765553 344
Q ss_pred EcCCCcEEEEEcCEEEEecCCCC
Q 040732 225 KTKDGQEHKSYAPLTIVCDGGFS 247 (541)
Q Consensus 225 ~~~~g~~~~v~a~lvV~AdG~~S 247 (541)
.+.+|+.. ..+|.||.|+|...
T Consensus 251 ~~~~g~~~-~~~d~vi~a~G~~~ 272 (369)
T 3d1c_A 251 SFDSGQSV-HTPHEPILATGFDA 272 (369)
T ss_dssp EESSSCCE-EESSCCEECCCBCG
T ss_pred EecCCeEe-ccCCceEEeeccCC
Confidence 56778753 24699999999654
No 267
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.23 E-value=0.001 Score=68.73 Aligned_cols=34 Identities=29% Similarity=0.351 Sum_probs=31.8
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..+|+|||||..|+-+|..+++.|.+|+|+|+.+
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 180 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD 180 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeec
Confidence 4579999999999999999999999999999886
No 268
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.23 E-value=0.00018 Score=74.92 Aligned_cols=36 Identities=31% Similarity=0.463 Sum_probs=32.7
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCC--CcEEEEecCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDG--RRVHVIERDMT 100 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G--~~V~viEr~~~ 100 (541)
.++||+|||||++|+.+|..|++.| .+|+|||+.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~ 42 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLV 42 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCc
Confidence 4579999999999999999999998 99999999863
No 269
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.22 E-value=0.0033 Score=61.34 Aligned_cols=34 Identities=29% Similarity=0.360 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 4579999999999999999999999999999875
No 270
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.22 E-value=0.0015 Score=64.34 Aligned_cols=34 Identities=26% Similarity=0.389 Sum_probs=31.6
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..+|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~ 187 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRD 187 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecC
Confidence 4689999999999999999999999999999875
No 271
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.21 E-value=0.00021 Score=75.44 Aligned_cols=57 Identities=16% Similarity=0.193 Sum_probs=44.4
Q ss_pred HHHHHHcCCCeEEEeCe-EEEeeeeC-C-eEEEEEEEcCCC---cEEEEEcCEEEEecCCCCc
Q 040732 192 MREKAASLPNVRMEEGT-VTSLFEEN-G-IVKGVHYKTKDG---QEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 192 L~~~~~~~~~v~v~~~~-v~~l~~~~-~-~v~gV~v~~~~g---~~~~v~a~lvV~AdG~~S~ 248 (541)
+.+.+.+.+++++..++ |++++.++ + +++||++...+| +..+++|+.||.|.|+...
T Consensus 227 ~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s 289 (504)
T 1n4w_A 227 YLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGS 289 (504)
T ss_dssp HHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCC
Confidence 34445556789999997 99998774 3 789999876667 4567889999999999754
No 272
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.19 E-value=0.00025 Score=81.37 Aligned_cols=36 Identities=22% Similarity=0.328 Sum_probs=33.1
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDMT 100 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~~ 100 (541)
..+||+||||||||+++|..|++.|+ +|+|||+.+.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~ 222 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEY 222 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence 46899999999999999999999999 7999999753
No 273
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.18 E-value=0.0022 Score=66.72 Aligned_cols=34 Identities=18% Similarity=0.250 Sum_probs=30.6
Q ss_pred CCcEEEECCChHHHHHHHHHh--------------------hCCC-cEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLG--------------------TDGR-RVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La--------------------~~G~-~V~viEr~~ 99 (541)
...|+|||+|..|+=+|..|+ +.|. +|+|++|+.
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~ 199 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRG 199 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCC
Confidence 468999999999999999999 6788 799999986
No 274
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.18 E-value=0.00025 Score=74.88 Aligned_cols=59 Identities=12% Similarity=0.094 Sum_probs=44.9
Q ss_pred HHHHHHHHcCCCeEEEeCe-EEEeeeeC-C-eEEEEEEEcCCC---cEEEEEcCEEEEecCCCCc
Q 040732 190 QRMREKAASLPNVRMEEGT-VTSLFEEN-G-IVKGVHYKTKDG---QEHKSYAPLTIVCDGGFSN 248 (541)
Q Consensus 190 ~~L~~~~~~~~~v~v~~~~-v~~l~~~~-~-~v~gV~v~~~~g---~~~~v~a~lvV~AdG~~S~ 248 (541)
..+...+.+.+++++..++ |++++.++ + +++||++...+| +..+++|+.||.|.|+...
T Consensus 230 ~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~s 294 (507)
T 1coy_A 230 KTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGT 294 (507)
T ss_dssp TTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCC
Confidence 3344445556789999997 99998775 4 789999876566 3567889999999999744
No 275
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.12 E-value=0.003 Score=67.09 Aligned_cols=36 Identities=28% Similarity=0.430 Sum_probs=33.2
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
...+|+|||+|.+|+-+|..|++.|.+|+|++|.+.
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 346899999999999999999999999999999874
No 276
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.08 E-value=0.0019 Score=67.95 Aligned_cols=55 Identities=15% Similarity=0.100 Sum_probs=36.9
Q ss_pred HHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcCCCcE--EEEEcCEEEEecCCC
Q 040732 188 FIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTKDGQE--HKSYAPLTIVCDGGF 246 (541)
Q Consensus 188 l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~~g~~--~~v~a~lvV~AdG~~ 246 (541)
+.+.+.+.+++. ||+++.++ |+++..+ .+ .+....+||+. .++.+|+||.|.|..
T Consensus 274 ~~~~~~~~L~~~-GV~v~~~~~v~~v~~~--~~-~~~~~~~dg~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 274 LSSYAQSHLENT-SIKVHLRTAVAKVEEK--QL-LAKTKHEDGKITEETIPYGTLIWATGNK 331 (502)
T ss_dssp HHHHHHHHHHHT-TCEEETTEEEEEECSS--EE-EEEEECTTSCEEEEEEECSEEEECCCEE
T ss_pred HHHHHHHHHHhc-ceeeecCceEEEEeCC--ce-EEEEEecCcccceeeeccCEEEEccCCc
Confidence 445555666666 89999997 7777542 22 23444567653 457899999999953
No 277
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.05 E-value=0.0029 Score=65.59 Aligned_cols=33 Identities=27% Similarity=0.621 Sum_probs=31.5
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.+|+|||||..|+-+|..|++.|.+|+++|+.+
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 181 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGE 181 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC
Confidence 589999999999999999999999999999986
No 278
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.03 E-value=0.00055 Score=73.53 Aligned_cols=40 Identities=25% Similarity=0.357 Sum_probs=36.6
Q ss_pred CCCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCC
Q 040732 63 SVAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQP 102 (541)
Q Consensus 63 ~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~ 102 (541)
++.+|||+|||+|..|+.+|..|++.|.+|+++||++...
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~g 44 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYG 44 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCccc
Confidence 4567999999999999999999999999999999997654
No 279
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.93 E-value=0.00029 Score=76.61 Aligned_cols=36 Identities=28% Similarity=0.362 Sum_probs=32.9
Q ss_pred CCcEEEECCChHHHHHHHHHhhCC--------CcEEEEecCC-CC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDG--------RRVHVIERDM-TQ 101 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G--------~~V~viEr~~-~~ 101 (541)
..+|+|||||++||++|+.|++.| ++|+|+|+.+ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 468999999999999999999998 9999999986 44
No 280
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.81 E-value=0.0028 Score=65.85 Aligned_cols=34 Identities=32% Similarity=0.485 Sum_probs=29.8
Q ss_pred CCcEEEECCChHHHHHHHHHhhC--------------------CC-cEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTD--------------------GR-RVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~--------------------G~-~V~viEr~~ 99 (541)
...|+|||+|.+|+=+|..|++. |. +|+|++|+.
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~ 201 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRG 201 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCC
Confidence 45899999999999999999974 64 899999875
No 281
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.81 E-value=0.0029 Score=72.04 Aligned_cols=33 Identities=21% Similarity=0.263 Sum_probs=31.2
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..|+|||+|+.|+-+|..|++.|.+|+|+|+.+
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~ 317 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARS 317 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCS
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCC
Confidence 579999999999999999999999999999875
No 282
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.78 E-value=0.0047 Score=59.57 Aligned_cols=33 Identities=15% Similarity=0.088 Sum_probs=30.2
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..+|+|||+|+.|+-+|..|++.| +|+++++.+
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~ 173 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGI 173 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTT
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCC
Confidence 468999999999999999999999 999998764
No 283
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.76 E-value=0.018 Score=56.11 Aligned_cols=33 Identities=18% Similarity=0.290 Sum_probs=31.3
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
-+|+|||||..|+=+|..|++.|.+|+|+|+.+
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 178 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD 178 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeccc
Confidence 479999999999999999999999999999876
No 284
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.76 E-value=0.0015 Score=69.60 Aligned_cols=36 Identities=22% Similarity=0.411 Sum_probs=33.1
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
...+|+|||+|.+|+-+|..|++.+.+|+|++|.+.
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 346899999999999999999999999999999874
No 285
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.63 E-value=0.0064 Score=69.67 Aligned_cols=33 Identities=33% Similarity=0.322 Sum_probs=30.7
Q ss_pred CcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
-+|+|||||..|+=+|..+++.|. +|+|+++.+
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 389999999999999999999997 899999875
No 286
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.60 E-value=0.01 Score=65.10 Aligned_cols=34 Identities=24% Similarity=0.362 Sum_probs=31.3
Q ss_pred CCcEEEEC--CChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVG--AGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVG--aG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..+|+||| +|..|+-+|..|++.|.+|+++++.+
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~ 558 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGA 558 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccc
Confidence 34699999 99999999999999999999999875
No 287
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.50 E-value=0.0059 Score=64.96 Aligned_cols=36 Identities=22% Similarity=0.426 Sum_probs=33.1
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
...+|+|||+|.+|+-+|..|++.|.+|++++|.+.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 346899999999999999999999999999999874
No 288
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.47 E-value=0.0038 Score=64.81 Aligned_cols=35 Identities=29% Similarity=0.377 Sum_probs=31.5
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
...+|+|||||.+|+=+|..+.+.|. +|++++|++
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 34689999999999999999999998 599999876
No 289
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.34 E-value=0.0043 Score=53.03 Aligned_cols=35 Identities=26% Similarity=0.309 Sum_probs=32.4
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.+-.|+|||+|..|..+|..|.+.|++|+++|+++
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 44579999999999999999999999999999986
No 290
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.28 E-value=0.015 Score=63.41 Aligned_cols=30 Identities=27% Similarity=0.395 Sum_probs=26.5
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEE
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHV 94 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~v 94 (541)
...+|+|||||..|+-+|..|++.|.+|++
T Consensus 493 ~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv 522 (671)
T 1ps9_A 493 VGNKVAIIGCGGIGFDTAMYLSQPGESTSQ 522 (671)
T ss_dssp CCSEEEEECCHHHHHHHHHHHTCCSSCGGG
T ss_pred CCCeEEEECCChhHHHHHHHHHhcCCCccc
Confidence 346899999999999999999999987764
No 291
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.24 E-value=0.014 Score=60.70 Aligned_cols=35 Identities=11% Similarity=0.139 Sum_probs=32.2
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
...+|+|||||.+|+=+|..|++.|.+|+++++.+
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~ 230 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT 230 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC
Confidence 34689999999999999999999999999999875
No 292
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.09 E-value=0.0059 Score=53.15 Aligned_cols=36 Identities=19% Similarity=0.445 Sum_probs=32.6
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
....|+|+|+|..|..+|..|.+.|.+|+++|+++.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 345899999999999999999999999999999753
No 293
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.04 E-value=0.005 Score=62.41 Aligned_cols=36 Identities=17% Similarity=0.227 Sum_probs=32.9
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQ 101 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~ 101 (541)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+..
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYP 181 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 357999999999999999999999999999998744
No 294
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=95.83 E-value=0.022 Score=58.84 Aligned_cols=35 Identities=20% Similarity=0.238 Sum_probs=31.9
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCc-EEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRR-VHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~-V~viEr~~ 99 (541)
...+|+|||||.+|+=+|..|++.|.+ |+++++.+
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 346899999999999999999999999 99999874
No 295
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.75 E-value=0.0095 Score=50.35 Aligned_cols=33 Identities=30% Similarity=0.519 Sum_probs=30.9
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.+|+|+|+|..|..+|..|.+.|.+|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 296
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.74 E-value=0.013 Score=50.85 Aligned_cols=34 Identities=24% Similarity=0.263 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
+..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3479999999999999999999999999999974
No 297
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.46 E-value=0.016 Score=49.21 Aligned_cols=33 Identities=27% Similarity=0.552 Sum_probs=31.1
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..|+|+|+|..|..+|..|.++|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999875
No 298
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=95.34 E-value=0.038 Score=60.84 Aligned_cols=34 Identities=24% Similarity=0.402 Sum_probs=31.5
Q ss_pred CCcEEEEC--CChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVG--AGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVG--aG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..+|+||| ||..|+-+|..|++.|.+|+|+++.+
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 45899998 99999999999999999999999875
No 299
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=95.09 E-value=0.079 Score=54.24 Aligned_cols=52 Identities=17% Similarity=0.187 Sum_probs=34.9
Q ss_pred HHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcCCCcEEEEEcCEEEEecCCCC
Q 040732 190 QRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGFS 247 (541)
Q Consensus 190 ~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~S 247 (541)
+.+.+.+++. +|+++.++ |+++..+ ++++...+++..++.+|.||.|.|...
T Consensus 204 ~~l~~~l~~~-GV~i~~~~~v~~v~~~-----~v~~~~~~~~g~~i~~D~vv~a~G~~~ 256 (430)
T 3h28_A 204 RLVEDLFAER-NIDWIANVAVKAIEPD-----KVIYEDLNGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHHHT-TCEEECSCEEEEECSS-----EEEEECTTSCEEEEECSEEEEECEEEC
T ss_pred HHHHHHHHHC-CCEEEeCCEEEEEeCC-----eEEEEecCCCceEEeeeEEEECCCCcc
Confidence 4445555555 89999987 8877542 245544444445677999999998643
No 300
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.03 E-value=0.02 Score=46.62 Aligned_cols=33 Identities=36% Similarity=0.493 Sum_probs=30.7
Q ss_pred CcEEEECCChHHHHHHHHHhhCC-CcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDG-RRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G-~~V~viEr~~ 99 (541)
..|+|+|+|..|..++..|.+.| .+|++++|++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 47999999999999999999999 8999999875
No 301
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.96 E-value=0.024 Score=55.25 Aligned_cols=33 Identities=27% Similarity=0.558 Sum_probs=30.8
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..|.|||+|..|..+|..|++.|++|+++|+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 369999999999999999999999999999875
No 302
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=94.95 E-value=0.089 Score=54.00 Aligned_cols=53 Identities=9% Similarity=0.000 Sum_probs=32.7
Q ss_pred HHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcCCCc---EEEEEcCEEEEecCCC
Q 040732 190 QRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTKDGQ---EHKSYAPLTIVCDGGF 246 (541)
Q Consensus 190 ~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~~g~---~~~v~a~lvV~AdG~~ 246 (541)
..+.+.+++. +|+++.++ |+++.. +.+. ++..+.+|+ ..++.+|++|.|.|..
T Consensus 212 ~~~~~~l~~~-gI~~~~~~~v~~v~~--~~v~-~~~~~~~g~~~~~~~i~~D~vv~~~g~~ 268 (437)
T 3sx6_A 212 GILTKGLKEE-GIEAYTNCKVTKVED--NKMY-VTQVDEKGETIKEMVLPVKFGMMIPAFK 268 (437)
T ss_dssp HHHHHHHHHT-TCEEECSEEEEEEET--TEEE-EEEECTTSCEEEEEEEECSEEEEECCEE
T ss_pred HHHHHHHHHC-CCEEEcCCEEEEEEC--CeEE-EEecccCCccccceEEEEeEEEEcCCCc
Confidence 3344455555 89999987 777753 2221 222234554 3457899999998843
No 303
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.79 E-value=0.029 Score=50.02 Aligned_cols=34 Identities=24% Similarity=0.316 Sum_probs=31.5
Q ss_pred CCcEEEECCChHHHHHHHHHhhC-CCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTD-GRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~-G~~V~viEr~~ 99 (541)
...|+|+|+|..|..+|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 45799999999999999999999 99999999875
No 304
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.62 E-value=0.029 Score=47.48 Aligned_cols=33 Identities=21% Similarity=0.381 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..|+|+|+|..|..+|..|.+.|.+|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 369999999999999999999999999999864
No 305
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.52 E-value=0.024 Score=52.30 Aligned_cols=32 Identities=25% Similarity=0.380 Sum_probs=30.6
Q ss_pred cEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 68 DVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 68 dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.|+|||+|..|..+|..|.+.|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 69999999999999999999999999999875
No 306
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=94.46 E-value=0.041 Score=56.14 Aligned_cols=36 Identities=25% Similarity=0.329 Sum_probs=33.2
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQ 101 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~ 101 (541)
..+|+|||||..|+-+|..|++.|.+|+++|+.+..
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 187 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRV 187 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCch
Confidence 568999999999999999999999999999998744
No 307
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=94.39 E-value=0.041 Score=55.90 Aligned_cols=36 Identities=33% Similarity=0.456 Sum_probs=32.9
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQ 101 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~ 101 (541)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+..
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 177 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRV 177 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcc
Confidence 457999999999999999999999999999998744
No 308
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=94.29 E-value=0.088 Score=51.00 Aligned_cols=33 Identities=3% Similarity=0.023 Sum_probs=26.2
Q ss_pred CcEEEECCCh-HHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGV-AGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~-aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.+++|||||. +++-+|..+++.|.+|+++++..
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~ 180 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNWSTDLVIATNGN 180 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSC
T ss_pred CceeeecCCCchhhhHHHHHHhCCceEEEEeccc
Confidence 4678888775 56788888888899999998764
No 309
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.20 E-value=0.045 Score=52.74 Aligned_cols=33 Identities=27% Similarity=0.440 Sum_probs=31.1
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 479999999999999999999999999999875
No 310
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=94.18 E-value=0.031 Score=54.66 Aligned_cols=33 Identities=30% Similarity=0.567 Sum_probs=31.1
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..|.|||||..|...|..++++|++|+++|.++
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999875
No 311
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=94.11 E-value=0.19 Score=50.97 Aligned_cols=49 Identities=12% Similarity=0.115 Sum_probs=33.1
Q ss_pred HHHHHHHHHHcCCCeEEEeCe-EEEeeeeCCeEEEEEEEcCCCcEEEEEcCEEEEecCCC
Q 040732 188 FIQRMREKAASLPNVRMEEGT-VTSLFEENGIVKGVHYKTKDGQEHKSYAPLTIVCDGGF 246 (541)
Q Consensus 188 l~~~L~~~~~~~~~v~v~~~~-v~~l~~~~~~v~gV~v~~~~g~~~~v~a~lvV~AdG~~ 246 (541)
+.+.+.+.+++. ||+++.++ |+++..+ +| .+++|++ +.+|+||.|.|..
T Consensus 220 ~~~~~~~~l~~~-gV~~~~~~~v~~i~~~-----~v--~~~~g~~--~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 220 SRKAVASIYNQL-GIKLVHNFKIKEIREH-----EI--VDEKGNT--IPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHH-TCEEECSCCEEEECSS-----EE--EETTSCE--EECSEEEEECCEE
T ss_pred HHHHHHHHHHHC-CCEEEcCCceEEECCC-----eE--EECCCCE--EeeeEEEECCCCC
Confidence 334444555554 89999987 8887543 23 3567875 4599999999854
No 312
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.75 E-value=0.052 Score=53.26 Aligned_cols=36 Identities=22% Similarity=0.418 Sum_probs=32.3
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
+....|.|||+|-.|.++|..|++.|+ +|+++|+++
T Consensus 2 ~~~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 2 IERRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 344689999999999999999999998 999999875
No 313
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.63 E-value=0.029 Score=58.08 Aligned_cols=35 Identities=26% Similarity=0.554 Sum_probs=32.2
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
.+.|+|+|+|-.|..+|..|.+.|++|+|+|+++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 45799999999999999999999999999999853
No 314
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.40 E-value=0.065 Score=52.56 Aligned_cols=33 Identities=27% Similarity=0.515 Sum_probs=30.9
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.+|.|||+|..|.+.|..|++.|.+|++++|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 479999999999999999999999999999864
No 315
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.30 E-value=0.08 Score=53.35 Aligned_cols=35 Identities=29% Similarity=0.338 Sum_probs=32.3
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
....|+|+|+|++|+.+|..|...|.+|+++|+.+
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 34689999999999999999999999999999886
No 316
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.28 E-value=0.085 Score=48.67 Aligned_cols=34 Identities=24% Similarity=0.421 Sum_probs=31.5
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERD 98 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~ 98 (541)
....|+|||||..|...|..|.+.|.+|+|+++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4568999999999999999999999999999875
No 317
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=93.26 E-value=0.07 Score=53.09 Aligned_cols=34 Identities=29% Similarity=0.384 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..+|.|||+|..|...|..|++.|++|++++|++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 318
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.23 E-value=0.073 Score=52.10 Aligned_cols=34 Identities=24% Similarity=0.392 Sum_probs=31.2
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCC--cEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGR--RVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~--~V~viEr~~ 99 (541)
...|+|||+|-.|.++|..|++.|. +|+++|++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3579999999999999999999998 999999874
No 319
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.14 E-value=0.066 Score=55.09 Aligned_cols=35 Identities=23% Similarity=0.456 Sum_probs=32.0
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQ 101 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~ 101 (541)
..|.|||.|++|+++|..|+++|++|++.|.....
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 46999999999999999999999999999987644
No 320
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.07 E-value=0.085 Score=50.62 Aligned_cols=32 Identities=25% Similarity=0.325 Sum_probs=30.4
Q ss_pred cEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 68 DVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 68 dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
+|.|||+|..|.++|..|++.|++|++++|++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 58999999999999999999999999999875
No 321
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.05 E-value=0.093 Score=47.96 Aligned_cols=36 Identities=22% Similarity=0.433 Sum_probs=31.6
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
....|.|||+|-.|.++|..|++.|.+|.+++|++.
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 345799999999999999999999999999998753
No 322
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=93.02 E-value=0.09 Score=51.94 Aligned_cols=32 Identities=31% Similarity=0.595 Sum_probs=30.3
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERD 98 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~ 98 (541)
.+|.|||+|..|.++|..|++.|.+|++++|.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 57999999999999999999999999999985
No 323
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.99 E-value=0.077 Score=54.03 Aligned_cols=35 Identities=29% Similarity=0.434 Sum_probs=32.1
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
+..|||||.|..|..+|..|.+.|++|++||+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 34799999999999999999999999999999863
No 324
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=92.96 E-value=0.074 Score=51.95 Aligned_cols=33 Identities=30% Similarity=0.437 Sum_probs=30.3
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.+|.|||+|..|.+.|..|++.|.+|++++|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 479999999999999999999999999999863
No 325
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.94 E-value=0.06 Score=51.34 Aligned_cols=35 Identities=17% Similarity=0.410 Sum_probs=31.9
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
....|+|||||..|...|..|.+.|.+|+|+++..
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 34679999999999999999999999999999764
No 326
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=92.92 E-value=0.15 Score=52.46 Aligned_cols=33 Identities=27% Similarity=0.525 Sum_probs=31.4
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 479999999999999999999999999999986
No 327
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.89 E-value=0.086 Score=51.08 Aligned_cols=38 Identities=18% Similarity=0.196 Sum_probs=32.6
Q ss_pred CCCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 63 SVAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 63 ~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
|+...+|.|||.|..|..+|..|++.|++|+++++++.
T Consensus 12 M~~~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 12 TTEQLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp ---CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 33456899999999999999999999999999999864
No 328
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.71 E-value=0.074 Score=50.17 Aligned_cols=34 Identities=26% Similarity=0.485 Sum_probs=31.3
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
...|+|||+|..|..+|..|++.|. +++|+|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 3579999999999999999999998 899999875
No 329
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.68 E-value=0.11 Score=50.85 Aligned_cols=34 Identities=18% Similarity=0.345 Sum_probs=31.2
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
...|.|||||-.|..+|..|+..|+ +|.++|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 4579999999999999999999998 999999874
No 330
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.59 E-value=0.11 Score=51.08 Aligned_cols=34 Identities=15% Similarity=0.215 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
...|.|||||-.|.++|..|++.|+ +|+++|++.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 3589999999999999999999998 999999875
No 331
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.51 E-value=0.099 Score=53.99 Aligned_cols=34 Identities=29% Similarity=0.334 Sum_probs=31.6
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
...|.|||.|.+|+++|..|+++|++|++.|+..
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 4579999999999999999999999999999875
No 332
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.38 E-value=0.089 Score=52.57 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=32.1
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
....|+|+|+|.+|+.+|..|...|.+|+++|+++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999999885
No 333
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=92.35 E-value=0.11 Score=50.83 Aligned_cols=33 Identities=30% Similarity=0.567 Sum_probs=31.1
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..|.|||+|..|...|..|+++|++|+++|+++
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999875
No 334
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=92.33 E-value=0.12 Score=50.35 Aligned_cols=34 Identities=29% Similarity=0.440 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..+|.|||.|..|..+|..|++.|++|+++++++
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3579999999999999999999999999999875
No 335
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.32 E-value=0.072 Score=45.41 Aligned_cols=34 Identities=24% Similarity=0.475 Sum_probs=31.1
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
...|+|||+|..|..+|..|.+.|.+|++++|.+
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4579999999999999999999999999999875
No 336
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.19 E-value=0.12 Score=51.47 Aligned_cols=37 Identities=19% Similarity=0.337 Sum_probs=32.2
Q ss_pred CCCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 63 SVAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 63 ~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
|+...+|.|||.|..|..+|..|++.|++|+++++++
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 5566799999999999999999999999999999875
No 337
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.14 E-value=0.12 Score=50.22 Aligned_cols=33 Identities=27% Similarity=0.427 Sum_probs=30.7
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..|.|||+|..|.++|..|++.|++|++++|++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 479999999999999999999999999999864
No 338
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=92.14 E-value=0.098 Score=50.60 Aligned_cols=33 Identities=24% Similarity=0.398 Sum_probs=30.9
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.+|.|||+|..|.+.|..|++.|.+|++++|+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 479999999999999999999999999999974
No 339
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.06 E-value=0.15 Score=50.18 Aligned_cols=33 Identities=24% Similarity=0.385 Sum_probs=31.0
Q ss_pred CcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
..|.|||||-.|.++|..|++.|+ +|+++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 589999999999999999999999 999999875
No 340
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.02 E-value=0.12 Score=53.59 Aligned_cols=35 Identities=20% Similarity=0.411 Sum_probs=32.5
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..+.|.|||+|-.|+.+|..|++.|++|+++|+++
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 45789999999999999999999999999999875
No 341
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=91.78 E-value=0.17 Score=49.63 Aligned_cols=33 Identities=21% Similarity=0.234 Sum_probs=30.3
Q ss_pred CcEEEECCChHHHH-HHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAA-LAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~-~A~~La~~G~~V~viEr~~ 99 (541)
..|.|||.|.+|++ +|..|.++|++|.+.|+..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 46999999999996 8999999999999999875
No 342
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=91.73 E-value=0.17 Score=50.41 Aligned_cols=34 Identities=29% Similarity=0.478 Sum_probs=31.8
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..+|.|||+|..|.++|..|++.|++|.+++|++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999874
No 343
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=91.59 E-value=0.16 Score=49.09 Aligned_cols=35 Identities=23% Similarity=0.342 Sum_probs=31.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.++..|.|||+|..|...|..|+ +|++|+++|+++
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 35678999999999999999999 999999999875
No 344
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.58 E-value=0.17 Score=50.95 Aligned_cols=35 Identities=29% Similarity=0.299 Sum_probs=31.9
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
....|+|+|+|.+|+.+|..+...|.+|+++|+.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34589999999999999999999999999999875
No 345
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=91.55 E-value=0.15 Score=51.60 Aligned_cols=34 Identities=32% Similarity=0.425 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
...|+|+|+|.+|+.+|..|...|.+|+++|+++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4579999999999999999999999999999875
No 346
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.49 E-value=0.15 Score=50.84 Aligned_cols=33 Identities=24% Similarity=0.472 Sum_probs=31.1
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..|+|+|+|.+|.+++..|+..|.+|+++++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999999874
No 347
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=91.46 E-value=0.2 Score=47.69 Aligned_cols=35 Identities=31% Similarity=0.481 Sum_probs=32.2
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
...|+|+|+|.+|.++|..|++.|.+|+|+.|...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 56899999999999999999999999999999863
No 348
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=91.44 E-value=0.11 Score=52.03 Aligned_cols=32 Identities=34% Similarity=0.467 Sum_probs=30.3
Q ss_pred cEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 68 DVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 68 dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.|.|||+|..|.++|..|++.|++|++++|++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999874
No 349
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=91.42 E-value=0.14 Score=53.06 Aligned_cols=35 Identities=20% Similarity=0.201 Sum_probs=32.5
Q ss_pred CCcEEEECCChHHHHHHHHHhhC-CC-cEEEEecCCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTD-GR-RVHVIERDMT 100 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~-G~-~V~viEr~~~ 100 (541)
...|.|||+|-.|+.+|..|++. |+ +|+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 35799999999999999999999 99 9999999874
No 350
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=91.41 E-value=0.17 Score=49.65 Aligned_cols=35 Identities=20% Similarity=0.425 Sum_probs=31.9
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
....|+|||+|..|+.+|..|++.|+ +++|+|.+.
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 45689999999999999999999998 799999875
No 351
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=91.27 E-value=0.49 Score=49.45 Aligned_cols=35 Identities=29% Similarity=0.459 Sum_probs=30.2
Q ss_pred CCcEEEECCChHHHHHHHHHhhC--CCcEEEEecCCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTD--GRRVHVIERDMT 100 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~--G~~V~viEr~~~ 100 (541)
..+|+|||+|-+|.=+|..|+++ +.+|+++=|.+.
T Consensus 246 gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 246 PYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred CcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 34799999999999999999875 679999988764
No 352
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.23 E-value=0.22 Score=48.49 Aligned_cols=34 Identities=24% Similarity=0.377 Sum_probs=31.5
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
...|.|||+|..|...|..|++.|++|.++++++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4679999999999999999999999999999875
No 353
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=91.15 E-value=0.21 Score=48.79 Aligned_cols=33 Identities=30% Similarity=0.407 Sum_probs=31.0
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCC-cEEEEecC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERD 98 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~ 98 (541)
...|.|||+|..|.++|..|++.|+ +|+++|+.
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4579999999999999999999999 99999987
No 354
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=91.15 E-value=0.098 Score=48.62 Aligned_cols=34 Identities=12% Similarity=0.097 Sum_probs=30.2
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
....|+|+|+|..|..+|..|.+.|+ |+++|+++
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 34579999999999999999999999 99999886
No 355
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=91.12 E-value=0.2 Score=51.76 Aligned_cols=33 Identities=30% Similarity=0.415 Sum_probs=30.9
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..|.|||+|..|..+|..|+++|++|+++|+++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999875
No 356
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=91.05 E-value=0.14 Score=49.41 Aligned_cols=35 Identities=26% Similarity=0.339 Sum_probs=32.2
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
....|+|||+|..|..+|..|++.|+ +++|+|.+.
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 45789999999999999999999998 899999875
No 357
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=91.03 E-value=0.24 Score=45.42 Aligned_cols=34 Identities=32% Similarity=0.389 Sum_probs=30.9
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
...|.|||+|-.|...|..|++.|++|.+++|++
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999874
No 358
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=91.02 E-value=0.18 Score=52.01 Aligned_cols=33 Identities=33% Similarity=0.467 Sum_probs=31.2
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
++|.|||+|-.|+.+|..|++.|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 479999999999999999999999999999875
No 359
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=91.02 E-value=0.19 Score=48.94 Aligned_cols=32 Identities=25% Similarity=0.277 Sum_probs=29.8
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.+|.|||+|..|.+.|..|+ .|.+|++++|+.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 57999999999999999999 999999999874
No 360
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=90.97 E-value=0.19 Score=48.27 Aligned_cols=33 Identities=27% Similarity=0.432 Sum_probs=30.9
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..|.|||.|..|..+|..|++.|++|++++|++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 369999999999999999999999999999875
No 361
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.97 E-value=0.21 Score=47.57 Aligned_cols=34 Identities=24% Similarity=0.352 Sum_probs=31.1
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
...|+|+|+|.+|.++|..|++.|.+|+|++|..
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 3579999999999999999999999999998874
No 362
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=90.96 E-value=0.22 Score=46.63 Aligned_cols=35 Identities=31% Similarity=0.511 Sum_probs=31.9
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
....|.|||+|-.|.++|..|++.|++|++++|++
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 45689999999999999999999999999999875
No 363
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=90.94 E-value=0.2 Score=49.38 Aligned_cols=35 Identities=29% Similarity=0.398 Sum_probs=31.8
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.+..|.|||+|..|.++|..|++.|++|++++|.+
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 45689999999999999999999999999999864
No 364
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=90.93 E-value=0.2 Score=48.76 Aligned_cols=32 Identities=34% Similarity=0.531 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHHhhCCC--cEEEEecCC
Q 040732 68 DVIVVGAGVAGAALAHTLGTDGR--RVHVIERDM 99 (541)
Q Consensus 68 dVvIVGaG~aGl~~A~~La~~G~--~V~viEr~~ 99 (541)
.|.|||||-.|.++|..|+..|+ +|.++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 69999999999999999999998 999999874
No 365
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=90.80 E-value=0.21 Score=51.20 Aligned_cols=36 Identities=17% Similarity=0.375 Sum_probs=33.2
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
....+.|||.|-.|+.+|..|++.|++|+++|+++.
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 456899999999999999999999999999999864
No 366
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=90.77 E-value=0.2 Score=49.01 Aligned_cols=34 Identities=29% Similarity=0.455 Sum_probs=29.7
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
...+|.|||+|..|.++|..|++.|.+|+++ +++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 3457999999999999999999999999999 653
No 367
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=90.76 E-value=0.19 Score=50.20 Aligned_cols=34 Identities=26% Similarity=0.489 Sum_probs=31.5
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCC-cEEEEecC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERD 98 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~ 98 (541)
.+..|||+|||.||..+|..|...|. +|.++|+.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 45689999999999999999999999 99999987
No 368
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=90.74 E-value=0.22 Score=48.84 Aligned_cols=37 Identities=27% Similarity=0.339 Sum_probs=31.4
Q ss_pred CCCCCcEEEECCChHHHHHHHHHhhCC----CcEEEEecCC
Q 040732 63 SVAGPDVIVVGAGVAGAALAHTLGTDG----RRVHVIERDM 99 (541)
Q Consensus 63 ~~~~~dVvIVGaG~aGl~~A~~La~~G----~~V~viEr~~ 99 (541)
++....|.|||+|-.|.++|..|.+.| .+|++++|++
T Consensus 19 ~~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 19 YFQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp ---CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 345568999999999999999999999 7999999875
No 369
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=90.73 E-value=0.22 Score=48.34 Aligned_cols=34 Identities=21% Similarity=0.152 Sum_probs=31.5
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..+|.|||.|-.|..+|..|++.|++|+++++++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999875
No 370
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=90.72 E-value=0.19 Score=47.29 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=31.6
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
....|+|||+|..|..+|..|++.|+ +++|+|.+.
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 34689999999999999999999998 799999875
No 371
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=90.61 E-value=0.3 Score=47.39 Aligned_cols=34 Identities=35% Similarity=0.536 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..+|.|||.|..|..+|..|++.|++|++++|++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999999875
No 372
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=90.57 E-value=0.2 Score=48.38 Aligned_cols=35 Identities=20% Similarity=0.247 Sum_probs=31.3
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
....|.|||+|-.|...|..|++.|++|.++++++
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 34579999999999999999999999999999864
No 373
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=90.51 E-value=0.26 Score=48.22 Aligned_cols=35 Identities=26% Similarity=0.435 Sum_probs=31.9
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
....|.|||+|..|.++|..|+..|+ +|.++|..+
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 34689999999999999999999998 999999875
No 374
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.48 E-value=0.25 Score=49.44 Aligned_cols=34 Identities=21% Similarity=0.402 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
...|+|+|+|..|..+|..|+..|.+|+++|+++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3579999999999999999999999999999874
No 375
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=90.30 E-value=0.25 Score=48.10 Aligned_cols=32 Identities=28% Similarity=0.460 Sum_probs=29.4
Q ss_pred cEEEECCChHHHHHHHHHhhC--CCcEEEEecCC
Q 040732 68 DVIVVGAGVAGAALAHTLGTD--GRRVHVIERDM 99 (541)
Q Consensus 68 dVvIVGaG~aGl~~A~~La~~--G~~V~viEr~~ 99 (541)
.|.|||+|-.|.++|..|++. |.+|+++|+++
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 689999999999999999985 78999999975
No 376
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=90.13 E-value=0.25 Score=50.41 Aligned_cols=34 Identities=12% Similarity=0.163 Sum_probs=31.0
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
....|.|||+|-.|+.+|..|++ |++|+++|+++
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 34689999999999999999998 99999999875
No 377
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=90.10 E-value=0.2 Score=51.34 Aligned_cols=32 Identities=25% Similarity=0.381 Sum_probs=30.2
Q ss_pred cEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 68 DVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 68 dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.|.|||+|-.|+.+|..|++.|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999999875
No 378
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=90.03 E-value=0.25 Score=48.37 Aligned_cols=34 Identities=24% Similarity=0.408 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
...|.|||.|..|..+|..|++.|++|+++++++
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4589999999999999999999999999999875
No 379
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=90.03 E-value=0.28 Score=47.47 Aligned_cols=34 Identities=24% Similarity=0.496 Sum_probs=31.0
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
...|+|+|+|.+|.++|..|++.|. +|+|+.|..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4579999999999999999999998 899999874
No 380
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=89.95 E-value=0.24 Score=49.30 Aligned_cols=34 Identities=29% Similarity=0.383 Sum_probs=31.5
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCC-cEEEEecC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERD 98 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~ 98 (541)
.+..|+|+|||.+|..+|..|...|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45689999999999999999999998 79999987
No 381
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=89.95 E-value=0.2 Score=49.16 Aligned_cols=30 Identities=33% Similarity=0.506 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHhhCCCcEEEEec
Q 040732 68 DVIVVGAGVAGAALAHTLGTDGRRVHVIER 97 (541)
Q Consensus 68 dVvIVGaG~aGl~~A~~La~~G~~V~viEr 97 (541)
.|.|||+|..|.++|..|++.|++|++++|
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 589999999999999999999999999998
No 382
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=89.77 E-value=0.31 Score=50.60 Aligned_cols=33 Identities=27% Similarity=0.508 Sum_probs=31.1
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999875
No 383
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=89.74 E-value=0.31 Score=48.88 Aligned_cols=35 Identities=34% Similarity=0.524 Sum_probs=31.8
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
....|+|+|+|..|..+|..++..|.+|+++|+.+
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34679999999999999999999999999999874
No 384
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=89.74 E-value=0.35 Score=47.33 Aligned_cols=34 Identities=26% Similarity=0.315 Sum_probs=31.1
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
...|.|||+|..|.++|..|+..|+ +|.++|..+
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 4579999999999999999999988 999999875
No 385
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=89.66 E-value=0.18 Score=46.46 Aligned_cols=34 Identities=24% Similarity=0.298 Sum_probs=30.9
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEE-EecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHV-IERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~v-iEr~~ 99 (541)
...|.|||+|-.|.++|..|++.|++|++ ++|++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 35899999999999999999999999999 88764
No 386
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=89.61 E-value=0.25 Score=47.17 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=31.2
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
...|+|+|+|.+|.++|..|++.|.+|+|+.|..
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3579999999999999999999999999999874
No 387
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=89.58 E-value=0.33 Score=47.44 Aligned_cols=34 Identities=26% Similarity=0.388 Sum_probs=30.8
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCC--cEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGR--RVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~--~V~viEr~~ 99 (541)
+.+|.|||+|-.|.++|..|+..|. +|.++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999988 899999875
No 388
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=89.56 E-value=0.33 Score=44.09 Aligned_cols=32 Identities=34% Similarity=0.423 Sum_probs=29.9
Q ss_pred cEEEEC-CChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 68 DVIVVG-AGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 68 dVvIVG-aG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.|.||| +|-.|..+|..|++.|++|.+++|++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999 99999999999999999999999864
No 389
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=89.53 E-value=0.38 Score=45.33 Aligned_cols=32 Identities=38% Similarity=0.488 Sum_probs=30.4
Q ss_pred cEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 68 DVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 68 dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
.|+|+|+|.+|.+++..|.+.|. +|.|++|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 89999999999999999999998 899999975
No 390
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=89.50 E-value=0.29 Score=50.82 Aligned_cols=36 Identities=28% Similarity=0.436 Sum_probs=32.0
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
+.+.+|.|||+|..|.++|..|++.|++|.+++|.+
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 456689999999999999999999999999999875
No 391
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=89.50 E-value=0.26 Score=48.96 Aligned_cols=34 Identities=26% Similarity=0.525 Sum_probs=31.6
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
...|+|||+|..|..+|..|++.|+ +++|+|.+.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 5689999999999999999999998 799999875
No 392
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=89.38 E-value=0.37 Score=47.95 Aligned_cols=35 Identities=17% Similarity=0.287 Sum_probs=31.7
Q ss_pred cEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCC
Q 040732 68 DVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQP 102 (541)
Q Consensus 68 dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~ 102 (541)
.|+|+|||..|..+|.++++.|++|+++|.++..+
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~~ 37 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQAL 37 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCh
Confidence 59999999999999999999999999999876543
No 393
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=89.24 E-value=0.23 Score=47.69 Aligned_cols=32 Identities=28% Similarity=0.380 Sum_probs=30.5
Q ss_pred cEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 68 DVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 68 dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
+|.|||.|..|..+|..|++.|++|++++|++
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 69999999999999999999999999999875
No 394
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=89.21 E-value=0.3 Score=47.82 Aligned_cols=34 Identities=29% Similarity=0.447 Sum_probs=30.6
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCC--cEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGR--RVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~--~V~viEr~~ 99 (541)
...|.|||+|..|.++|..|+..|. ++.++|...
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 4579999999999999999999887 899999853
No 395
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=89.21 E-value=0.22 Score=48.42 Aligned_cols=31 Identities=29% Similarity=0.362 Sum_probs=29.3
Q ss_pred CcEEEECCChHHHHHHHHHhhC-----C-CcEEEEec
Q 040732 67 PDVIVVGAGVAGAALAHTLGTD-----G-RRVHVIER 97 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~-----G-~~V~viEr 97 (541)
.+|.|||+|..|.++|..|++. | .+|++++|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4799999999999999999999 9 99999987
No 396
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=89.18 E-value=0.32 Score=45.83 Aligned_cols=33 Identities=21% Similarity=0.305 Sum_probs=30.5
Q ss_pred CcEEEECCChHHHHHHHHHhhCC----CcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDG----RRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G----~~V~viEr~~ 99 (541)
..|.|||+|-.|.+.|..|++.| .+|.+++|++
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSK 41 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence 47999999999999999999999 6999999875
No 397
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=89.08 E-value=0.33 Score=51.31 Aligned_cols=35 Identities=20% Similarity=0.425 Sum_probs=32.0
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
....|+|||+|..|+.+|..|++.|+ +++|+|.+.
T Consensus 325 ~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 325 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 35689999999999999999999998 799999875
No 398
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=89.04 E-value=0.28 Score=46.84 Aligned_cols=35 Identities=29% Similarity=0.410 Sum_probs=31.8
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDMT 100 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~~ 100 (541)
...|+|+|+|.+|.++|..|++.|. +|+|+.|...
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 4579999999999999999999998 8999998753
No 399
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=89.00 E-value=0.39 Score=46.73 Aligned_cols=35 Identities=26% Similarity=0.448 Sum_probs=31.5
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
....|+|+|+|.+|.++|..|++.|. +|+|+.|..
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 34579999999999999999999998 899999874
No 400
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=88.93 E-value=0.39 Score=46.03 Aligned_cols=35 Identities=37% Similarity=0.460 Sum_probs=31.3
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
....|+|+|+|.+|.++|..|++.|. +|+|+.|..
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 34689999999999999999999998 699998874
No 401
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=88.93 E-value=0.33 Score=51.17 Aligned_cols=34 Identities=21% Similarity=0.441 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
...|+|||+|..|+.+|..|++.|+ +++|+|.+.
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~ 361 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 361 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 4689999999999999999999998 799999875
No 402
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=88.87 E-value=0.35 Score=47.27 Aligned_cols=33 Identities=21% Similarity=0.375 Sum_probs=31.3
Q ss_pred CcEEEECCChHHHHHHHHHhhCC-CcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDG-RRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G-~~V~viEr~~ 99 (541)
..|.|||.|-.|..+|..|++.| ++|+++++++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 57999999999999999999999 9999999986
No 403
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=88.80 E-value=0.37 Score=45.94 Aligned_cols=32 Identities=34% Similarity=0.481 Sum_probs=29.8
Q ss_pred cEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 68 DVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 68 dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.|.|||+|..|.++|..|.+.|++|.++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999998864
No 404
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=88.78 E-value=0.27 Score=50.90 Aligned_cols=33 Identities=21% Similarity=0.385 Sum_probs=30.7
Q ss_pred CcEEEECCChHHHHHHHHHhhC--CCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTD--GRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~--G~~V~viEr~~ 99 (541)
..|.|||+|-.|+.+|..|++. |++|+++|+++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5799999999999999999998 89999999875
No 405
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=88.70 E-value=0.39 Score=50.96 Aligned_cols=37 Identities=22% Similarity=0.266 Sum_probs=33.9
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCCCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQPD 103 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~~~ 103 (541)
..|+|||+|..|..+|..|.+.|++|+++|+++....
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~ 385 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVC 385 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHh
Confidence 7899999999999999999999999999999975433
No 406
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=88.62 E-value=0.4 Score=46.32 Aligned_cols=33 Identities=24% Similarity=0.537 Sum_probs=30.5
Q ss_pred CcEEEEC-CChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVG-AGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVG-aG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..|.||| +|-.|.++|..|++.|++|.++++++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 3699999 99999999999999999999999764
No 407
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=88.60 E-value=0.33 Score=49.19 Aligned_cols=31 Identities=23% Similarity=0.359 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 68 DVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 68 dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.|.|||+|-.|+.+|..|++ |++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 58999999999999999999 99999999875
No 408
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=88.59 E-value=0.44 Score=49.68 Aligned_cols=35 Identities=23% Similarity=0.294 Sum_probs=32.3
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
....|.|||+|..|..+|..|+++|++|++++|.+
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999999875
No 409
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=88.58 E-value=0.41 Score=49.54 Aligned_cols=34 Identities=24% Similarity=0.424 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..+|.|||.|..|..+|..|+++|++|+++++++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999986
No 410
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=88.57 E-value=0.44 Score=49.84 Aligned_cols=36 Identities=25% Similarity=0.340 Sum_probs=33.6
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
..+|+||||+|++|+.+|..|++.|.+|+|+|+...
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 39 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQL 39 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 468999999999999999999999999999999863
No 411
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=88.52 E-value=0.42 Score=46.52 Aligned_cols=33 Identities=21% Similarity=0.390 Sum_probs=30.3
Q ss_pred CcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
..|.|||||-.|..+|..|+..|+ +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 479999999999999999999997 999999874
No 412
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=88.52 E-value=0.43 Score=49.12 Aligned_cols=35 Identities=40% Similarity=0.464 Sum_probs=32.0
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
....|+|+|+|..|.++|..|+..|.+|+++|+++
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 45689999999999999999999999999999864
No 413
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=88.48 E-value=0.53 Score=44.78 Aligned_cols=34 Identities=26% Similarity=0.504 Sum_probs=31.5
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
..|+|.|+|-.|..++..|.++|++|+++.|...
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4799999999999999999999999999999753
No 414
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=88.47 E-value=0.34 Score=46.85 Aligned_cols=33 Identities=24% Similarity=0.363 Sum_probs=30.8
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..|.|||+|..|..+|..|++.|++|+++++++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 469999999999999999999999999999875
No 415
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=88.46 E-value=0.31 Score=47.63 Aligned_cols=32 Identities=28% Similarity=0.405 Sum_probs=29.8
Q ss_pred cEEEECCChHHHHHHHHHhhCCC--cEEEEecCC
Q 040732 68 DVIVVGAGVAGAALAHTLGTDGR--RVHVIERDM 99 (541)
Q Consensus 68 dVvIVGaG~aGl~~A~~La~~G~--~V~viEr~~ 99 (541)
.|.|||+|-.|.++|..|++.|+ +|+++|+++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 58999999999999999999998 999999874
No 416
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=88.44 E-value=0.72 Score=46.15 Aligned_cols=37 Identities=22% Similarity=0.377 Sum_probs=32.9
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQ 101 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~ 101 (541)
....|.|+|+|..|..+|.++.+.|++|++++..+..
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~ 47 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDC 47 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 4467999999999999999999999999999987643
No 417
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=88.39 E-value=0.5 Score=45.20 Aligned_cols=34 Identities=21% Similarity=0.420 Sum_probs=31.2
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCC---cEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGR---RVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~---~V~viEr~~ 99 (541)
...|.|||+|-.|.++|..|.+.|+ +|.+++|++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 3579999999999999999999998 999999875
No 418
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=88.37 E-value=0.49 Score=46.31 Aligned_cols=35 Identities=20% Similarity=0.175 Sum_probs=31.2
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCC--cEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGR--RVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~--~V~viEr~~ 99 (541)
....|.|||+|..|.++|..|+..|+ +|.++|...
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 44689999999999999999999997 899999853
No 419
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=88.35 E-value=0.14 Score=47.51 Aligned_cols=32 Identities=22% Similarity=0.279 Sum_probs=29.7
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEec
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIER 97 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr 97 (541)
..+|.|||+|..|.++|..|+++|++|+++++
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 35799999999999999999999999999886
No 420
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=88.32 E-value=0.4 Score=46.09 Aligned_cols=32 Identities=22% Similarity=0.253 Sum_probs=30.1
Q ss_pred cEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 68 DVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 68 dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.|.|||+|-.|...|..|++.|++|.++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 58999999999999999999999999999875
No 421
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=88.31 E-value=0.37 Score=50.08 Aligned_cols=35 Identities=20% Similarity=0.406 Sum_probs=32.5
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+.
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 225 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDL 225 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCc
Confidence 46899999999999999999999999999999864
No 422
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=88.31 E-value=0.21 Score=49.49 Aligned_cols=33 Identities=30% Similarity=0.454 Sum_probs=30.9
Q ss_pred CcEEEECCChHHHHHHHHHhhCC-------CcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDG-------RRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G-------~~V~viEr~~ 99 (541)
..|.|||+|..|.++|..|++.| .+|+++++++
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~ 48 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEE 48 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcCh
Confidence 47999999999999999999999 8999999875
No 423
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=88.25 E-value=0.39 Score=46.11 Aligned_cols=33 Identities=27% Similarity=0.519 Sum_probs=29.8
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
...|+|+|+|.+|.++|..|++.| +|+|++|..
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 357999999999999999999999 999998863
No 424
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=88.22 E-value=0.58 Score=44.10 Aligned_cols=35 Identities=26% Similarity=0.297 Sum_probs=30.9
Q ss_pred CCCcEEEECC-C-hHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGA-G-VAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGa-G-~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
....|+|.|| | -.|..+|..|+++|.+|++++|+.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 4457999999 7 699999999999999999999874
No 425
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=88.18 E-value=0.49 Score=45.27 Aligned_cols=35 Identities=23% Similarity=0.429 Sum_probs=31.4
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
....|+|+|+|.+|.++|..|++.|. +|.|+.|..
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 34679999999999999999999996 899999874
No 426
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=88.16 E-value=0.34 Score=46.71 Aligned_cols=32 Identities=22% Similarity=0.230 Sum_probs=29.7
Q ss_pred cEEEECCChHHHHHHHHHhhCCC--cEEEEecCC
Q 040732 68 DVIVVGAGVAGAALAHTLGTDGR--RVHVIERDM 99 (541)
Q Consensus 68 dVvIVGaG~aGl~~A~~La~~G~--~V~viEr~~ 99 (541)
.|.|||+|..|.++|..|++.|. +|.++|+.+
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 69999999999999999999998 899999875
No 427
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=88.16 E-value=0.43 Score=45.71 Aligned_cols=35 Identities=23% Similarity=0.287 Sum_probs=31.6
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
....|+|+|+|.+|.++|..|++.|. +|+|+.|..
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 34689999999999999999999998 899999874
No 428
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=88.11 E-value=0.47 Score=43.77 Aligned_cols=35 Identities=31% Similarity=0.422 Sum_probs=31.6
Q ss_pred CCCcEEEECC-ChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGA-GVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGa-G~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
....|+|.|| |-.|..+|..|.++|++|+++.|++
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 4567999999 9999999999999999999999975
No 429
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=88.05 E-value=0.48 Score=45.09 Aligned_cols=35 Identities=26% Similarity=0.340 Sum_probs=31.2
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
....|+|+|+|.+|.++|..|++.|. +|+|+.|..
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 34679999999999999999999996 899998864
No 430
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=88.03 E-value=0.47 Score=46.24 Aligned_cols=33 Identities=24% Similarity=0.491 Sum_probs=30.9
Q ss_pred CcEEEECCChHHHHHHHHHhhCCC--cEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGR--RVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~--~V~viEr~~ 99 (541)
..|.|||+|..|.++|..|++.|+ +|.++|+++
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 579999999999999999999999 999999875
No 431
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=87.98 E-value=0.45 Score=49.45 Aligned_cols=33 Identities=24% Similarity=0.447 Sum_probs=30.9
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.+|.|||+|..|..+|..|+++|++|.+++|.+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999875
No 432
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=87.97 E-value=0.48 Score=48.31 Aligned_cols=35 Identities=37% Similarity=0.582 Sum_probs=32.0
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
....|+|||+|..|+.+|..|++.|+ +++|+|.+.
T Consensus 39 ~~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~ 74 (434)
T 1tt5_B 39 DTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDT 74 (434)
T ss_dssp HTCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCB
T ss_pred cCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 45689999999999999999999998 899999875
No 433
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=87.93 E-value=0.52 Score=45.42 Aligned_cols=34 Identities=32% Similarity=0.546 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
...|.|||+|..|..+|..|...|.+|+++++.+
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4579999999999999999999999999999874
No 434
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=87.92 E-value=0.52 Score=45.80 Aligned_cols=35 Identities=23% Similarity=0.477 Sum_probs=31.5
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
....|+|+|+|.+|.++|..|++.|. +|+|+.|..
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~ 182 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKD 182 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 34589999999999999999999998 799999874
No 435
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=87.90 E-value=0.37 Score=45.41 Aligned_cols=32 Identities=31% Similarity=0.459 Sum_probs=29.8
Q ss_pred cEEEECCChHHHHHHHHHhhCC-CcEEEEecCC
Q 040732 68 DVIVVGAGVAGAALAHTLGTDG-RRVHVIERDM 99 (541)
Q Consensus 68 dVvIVGaG~aGl~~A~~La~~G-~~V~viEr~~ 99 (541)
.|.|||+|-.|.+.|..|++.| .+|.+++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 5899999999999999999999 9999999874
No 436
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=87.89 E-value=0.51 Score=45.63 Aligned_cols=35 Identities=34% Similarity=0.500 Sum_probs=31.9
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
....|.|||+|..|..+|..|...|.+|+++++.+
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 34579999999999999999999999999999874
No 437
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=87.83 E-value=0.45 Score=48.53 Aligned_cols=35 Identities=23% Similarity=0.229 Sum_probs=32.0
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
....|.|||.|-.|+.+|..|++.|++|+.+|-++
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 34589999999999999999999999999999875
No 438
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=87.67 E-value=0.43 Score=45.61 Aligned_cols=31 Identities=26% Similarity=0.346 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 68 DVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 68 dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.|.|||+|..|...|..|++ |++|.++++++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 59999999999999999999 99999999875
No 439
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=87.63 E-value=0.41 Score=46.10 Aligned_cols=33 Identities=24% Similarity=0.392 Sum_probs=30.7
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..|.|||+|..|...|..|++.|++|.++++++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999999874
No 440
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=87.61 E-value=0.44 Score=49.15 Aligned_cols=34 Identities=26% Similarity=0.345 Sum_probs=31.2
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
...|+|||||..|...|..|.+.|.+|+|+++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 4579999999999999999999999999999753
No 441
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=87.55 E-value=0.56 Score=42.47 Aligned_cols=32 Identities=28% Similarity=0.494 Sum_probs=29.9
Q ss_pred cEEEECC-ChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 68 DVIVVGA-GVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 68 dVvIVGa-G~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.|+|.|| |-.|..++..|.++|++|+++.|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 5999996 9999999999999999999999975
No 442
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=87.55 E-value=0.43 Score=46.60 Aligned_cols=37 Identities=19% Similarity=0.374 Sum_probs=31.8
Q ss_pred CCCCCcEEEECCChHHHHHHHHHhhCCC--cEEEEecCC
Q 040732 63 SVAGPDVIVVGAGVAGAALAHTLGTDGR--RVHVIERDM 99 (541)
Q Consensus 63 ~~~~~dVvIVGaG~aGl~~A~~La~~G~--~V~viEr~~ 99 (541)
|+++..|.|||||-.|.++|+.|+..+. ++.++|.+.
T Consensus 2 ~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 40 (318)
T 1ez4_A 2 MPNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVK 40 (318)
T ss_dssp BTTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 4455789999999999999999998876 799999853
No 443
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=87.55 E-value=0.58 Score=46.13 Aligned_cols=33 Identities=24% Similarity=0.381 Sum_probs=30.8
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..|.|||.|..|.++|..|++.|++|.++++++
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999875
No 444
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=87.52 E-value=0.58 Score=45.86 Aligned_cols=36 Identities=22% Similarity=0.289 Sum_probs=31.5
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCC--cEEEEecCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGR--RVHVIERDM 99 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~--~V~viEr~~ 99 (541)
.....|.|||+|-.|.++|+.|+..|. ++.++|...
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 345689999999999999999999987 899999753
No 445
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=87.44 E-value=0.39 Score=45.86 Aligned_cols=34 Identities=29% Similarity=0.454 Sum_probs=31.1
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
...|+|||+|.+|.++|..|.+.|.+|++++|..
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 3579999999999999999999999999999874
No 446
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=87.40 E-value=0.4 Score=46.71 Aligned_cols=33 Identities=21% Similarity=0.292 Sum_probs=30.5
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCC-cEEEEecC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERD 98 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~ 98 (541)
...|.|||.|..|..+|..|++.|+ +|++++++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 3579999999999999999999999 99999986
No 447
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=87.31 E-value=0.79 Score=46.02 Aligned_cols=36 Identities=19% Similarity=0.398 Sum_probs=32.4
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
....|+|+|+|..|..+|.++.+.|++|++++..+.
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 345899999999999999999999999999998754
No 448
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=87.28 E-value=0.4 Score=46.57 Aligned_cols=32 Identities=31% Similarity=0.480 Sum_probs=29.6
Q ss_pred cEEEECCChHHHHHHHHHhhCC--CcEEEEecCC
Q 040732 68 DVIVVGAGVAGAALAHTLGTDG--RRVHVIERDM 99 (541)
Q Consensus 68 dVvIVGaG~aGl~~A~~La~~G--~~V~viEr~~ 99 (541)
.|.|||+|-.|.++|..|++.| .+|+++|++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 6999999999999999999999 6899999874
No 449
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=87.24 E-value=0.45 Score=46.54 Aligned_cols=34 Identities=26% Similarity=0.401 Sum_probs=30.5
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
...+|+|||+|..|+-+|..|++.| +|+++++..
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 3468999999999999999999999 799999874
No 450
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=87.23 E-value=0.36 Score=48.31 Aligned_cols=32 Identities=25% Similarity=0.485 Sum_probs=30.3
Q ss_pred cEEEECCChHHHHHHHHHhhCC-------CcEEEEecCC
Q 040732 68 DVIVVGAGVAGAALAHTLGTDG-------RRVHVIERDM 99 (541)
Q Consensus 68 dVvIVGaG~aGl~~A~~La~~G-------~~V~viEr~~ 99 (541)
.|.|||+|..|.++|..|++.| .+|++++|++
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~ 61 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDE 61 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSC
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECCh
Confidence 6999999999999999999999 9999999875
No 451
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=87.21 E-value=0.47 Score=51.95 Aligned_cols=33 Identities=24% Similarity=0.368 Sum_probs=31.1
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..|.|||+|..|...|..|+++|++|+++|+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999875
No 452
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=87.15 E-value=0.52 Score=48.90 Aligned_cols=32 Identities=47% Similarity=0.636 Sum_probs=30.3
Q ss_pred cEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 68 DVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 68 dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
+|.|||+|..|..+|..|+++|++|.+++|++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999864
No 453
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=87.15 E-value=0.64 Score=41.46 Aligned_cols=34 Identities=26% Similarity=0.394 Sum_probs=31.2
Q ss_pred CcEEEECC-ChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 67 PDVIVVGA-GVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 67 ~dVvIVGa-G~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
..|+|.|| |-.|..++..|.++|.+|+++.|++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 46999999 99999999999999999999999753
No 454
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=87.08 E-value=0.56 Score=48.59 Aligned_cols=34 Identities=29% Similarity=0.400 Sum_probs=31.4
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..+|.|||+|..|..+|..|++.|++|.+++|.+
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 3579999999999999999999999999999874
No 455
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=87.08 E-value=0.45 Score=46.32 Aligned_cols=32 Identities=28% Similarity=0.443 Sum_probs=29.6
Q ss_pred cEEEECCChHHHHHHHHHhhCCC--cEEEEecCC
Q 040732 68 DVIVVGAGVAGAALAHTLGTDGR--RVHVIERDM 99 (541)
Q Consensus 68 dVvIVGaG~aGl~~A~~La~~G~--~V~viEr~~ 99 (541)
.|.|||+|..|.++|..|++.|+ ++.++|..+
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 68999999999999999999887 899999875
No 456
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=87.03 E-value=0.54 Score=44.82 Aligned_cols=32 Identities=25% Similarity=0.508 Sum_probs=29.6
Q ss_pred cEEEECCChHHHHHHHHHhhCCC--cEEEEecCC
Q 040732 68 DVIVVGAGVAGAALAHTLGTDGR--RVHVIERDM 99 (541)
Q Consensus 68 dVvIVGaG~aGl~~A~~La~~G~--~V~viEr~~ 99 (541)
.|.|||+|..|.++|..|++.|+ +|+++++++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 59999999999999999999998 899998864
No 457
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=87.02 E-value=0.44 Score=47.11 Aligned_cols=35 Identities=23% Similarity=0.372 Sum_probs=31.8
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
....|+|||+|..|+.+|..|++.|+ +++|+|.+.
T Consensus 35 ~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~ 70 (346)
T 1y8q_A 35 RASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQ 70 (346)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 35689999999999999999999998 899999875
No 458
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=87.01 E-value=0.5 Score=46.25 Aligned_cols=35 Identities=23% Similarity=0.381 Sum_probs=31.0
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCC--cEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGR--RVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~--~V~viEr~~ 99 (541)
....|.|||+|..|.++|..|+..|+ ++.++|...
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 44689999999999999999999887 899999853
No 459
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=87.00 E-value=0.64 Score=43.93 Aligned_cols=32 Identities=41% Similarity=0.522 Sum_probs=30.2
Q ss_pred cEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 68 DVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 68 dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.|+|||+|.+|.++|..|.+.|.+|++++|..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 89999999999999999999999999999874
No 460
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=86.98 E-value=0.49 Score=46.17 Aligned_cols=35 Identities=26% Similarity=0.524 Sum_probs=30.6
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCC--cEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGR--RVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~--~V~viEr~~ 99 (541)
....|+|||||-.|.++|..|+..|. .+.++|.+.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 45689999999999999999998885 799999753
No 461
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=86.91 E-value=0.53 Score=47.60 Aligned_cols=36 Identities=33% Similarity=0.409 Sum_probs=32.6
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
-....|+|||.|..|..+|..|...|.+|+++|+++
T Consensus 218 L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 218 FGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 345689999999999999999999999999999875
No 462
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=86.86 E-value=0.54 Score=44.97 Aligned_cols=33 Identities=24% Similarity=0.403 Sum_probs=30.7
Q ss_pred CcEEEECC-ChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGA-GVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGa-G~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..|.|||+ |-.|..+|..|++.|++|++++|++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 47999999 9999999999999999999999864
No 463
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=86.84 E-value=0.48 Score=43.28 Aligned_cols=34 Identities=26% Similarity=0.454 Sum_probs=31.1
Q ss_pred CcEEEECC-ChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 67 PDVIVVGA-GVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 67 ~dVvIVGa-G~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
..|+|.|| |-.|..++..|.++|++|+++.|.+.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 47999996 99999999999999999999999864
No 464
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=86.71 E-value=0.57 Score=44.53 Aligned_cols=33 Identities=21% Similarity=0.377 Sum_probs=30.9
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..|+|.|||-.|..++..|.++|++|+++.|.+
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 479999999999999999999999999999875
No 465
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=86.67 E-value=0.65 Score=42.23 Aligned_cols=32 Identities=34% Similarity=0.530 Sum_probs=30.0
Q ss_pred cEEEECC-ChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 68 DVIVVGA-GVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 68 dVvIVGa-G~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.|+|.|| |-.|..++..|.++|++|+++.|.+
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4999999 9999999999999999999999875
No 466
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=86.64 E-value=0.53 Score=48.77 Aligned_cols=35 Identities=34% Similarity=0.523 Sum_probs=32.0
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
....|+|||+|..|..+|..|+..|.+|+++|+++
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999999875
No 467
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=86.49 E-value=0.61 Score=45.48 Aligned_cols=34 Identities=32% Similarity=0.606 Sum_probs=30.2
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCC--cEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGR--RVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~--~V~viEr~~ 99 (541)
...|.|||+|-.|.++|+.|+..|. +|.++|.+.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 4589999999999999999998875 799999874
No 468
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=86.47 E-value=0.63 Score=44.26 Aligned_cols=34 Identities=24% Similarity=0.450 Sum_probs=30.8
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
...|+|+|+|.+|.++|..|++.|. +|+|+.|..
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~ 153 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNV 153 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3579999999999999999999997 799998874
No 469
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=86.44 E-value=0.72 Score=45.41 Aligned_cols=33 Identities=33% Similarity=0.355 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..|.|||+|-.|.+.|..|++.|++|+++++.+
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 469999999999999999999999999999874
No 470
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=86.36 E-value=0.66 Score=46.92 Aligned_cols=37 Identities=22% Similarity=0.247 Sum_probs=32.8
Q ss_pred CCCCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 62 ESVAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 62 ~~~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.|+....|+|+|||..|..++.++.+.|++|.+++ .+
T Consensus 20 ~mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~ 56 (403)
T 3k5i_A 20 HMWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-AD 56 (403)
T ss_dssp -CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-ST
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CC
Confidence 35556789999999999999999999999999999 54
No 471
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=86.29 E-value=1.2 Score=46.38 Aligned_cols=37 Identities=24% Similarity=0.355 Sum_probs=34.2
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
..++|+||||+|++|+.+|..|++.|.+|+|+|+...
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 4569999999999999999999999999999999863
No 472
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=86.24 E-value=0.44 Score=48.17 Aligned_cols=31 Identities=29% Similarity=0.404 Sum_probs=28.3
Q ss_pred CcEEEECCChHHHHHHHHHhh-CCCcEEEEec
Q 040732 67 PDVIVVGAGVAGAALAHTLGT-DGRRVHVIER 97 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~-~G~~V~viEr 97 (541)
++|.|||+|..|.++|..|++ .|.+|+++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~ 34 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTL 34 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeC
Confidence 369999999999999999998 5999999993
No 473
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=86.14 E-value=0.8 Score=42.71 Aligned_cols=33 Identities=12% Similarity=0.211 Sum_probs=30.6
Q ss_pred CcEEEECCChHHHHHHHHHhhCCC----cEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGR----RVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~----~V~viEr~~ 99 (541)
..|.|||+|-.|.+.|..|.+.|+ +|.+++|++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 469999999999999999999998 999999874
No 474
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=86.09 E-value=0.75 Score=44.05 Aligned_cols=34 Identities=26% Similarity=0.454 Sum_probs=30.8
Q ss_pred CCcEEEEC-CChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVG-AGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVG-aG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
...|+|+| +|.+|.++|..|++.|.+|+++.|..
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 35799999 89999999999999999999999863
No 475
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=86.05 E-value=0.62 Score=45.28 Aligned_cols=36 Identities=28% Similarity=0.465 Sum_probs=31.8
Q ss_pred CCCCcEEEECCC-hHHHHHHHHHhhCCCcEEEEecCC
Q 040732 64 VAGPDVIVVGAG-VAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 64 ~~~~dVvIVGaG-~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
-...+|+|||+| +.|..+|..|.+.|.+|+|.+|..
T Consensus 175 l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~ 211 (320)
T 1edz_A 175 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNN 211 (320)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE
T ss_pred CCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCch
Confidence 355789999999 679999999999999999998863
No 476
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=86.03 E-value=0.86 Score=45.66 Aligned_cols=37 Identities=30% Similarity=0.237 Sum_probs=33.8
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMTQ 101 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~~ 101 (541)
....++|+|||..|.++|..++..|++|+|+|.++..
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~ 239 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVF 239 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhh
Confidence 4568999999999999999999999999999988754
No 477
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=85.98 E-value=0.56 Score=45.42 Aligned_cols=33 Identities=24% Similarity=0.426 Sum_probs=29.9
Q ss_pred CcEEEECCChHHHHHHHHHhhCCC--cEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGR--RVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~--~V~viEr~~ 99 (541)
..|.|||||-.|...|..|+..|+ +|.++|.+.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 579999999999999999999998 999999875
No 478
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=85.84 E-value=0.69 Score=43.42 Aligned_cols=33 Identities=12% Similarity=0.252 Sum_probs=30.5
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..|.|||+|-.|...|..|.+.|.+|.++++++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 479999999999999999999999999999874
No 479
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=85.62 E-value=0.6 Score=48.46 Aligned_cols=33 Identities=24% Similarity=0.428 Sum_probs=30.5
Q ss_pred CcEEEECCChHHHHHHHHHhhC--CCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTD--GRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~--G~~V~viEr~~ 99 (541)
..|.|||+|-.|+.+|..|++. |++|+++|+++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999998 79999999875
No 480
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=85.59 E-value=0.64 Score=43.88 Aligned_cols=33 Identities=33% Similarity=0.503 Sum_probs=30.3
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCc-EEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRR-VHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~-V~viEr~~ 99 (541)
..|.|||+|-.|...|..|++.|++ |.++++++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 4799999999999999999999998 89999864
No 481
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=85.36 E-value=0.93 Score=42.27 Aligned_cols=35 Identities=29% Similarity=0.427 Sum_probs=30.3
Q ss_pred CCCcEEEECC-ChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGA-GVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGa-G~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
....|+|.|| |-.|..+|..|+++|.+|+++.|+.
T Consensus 18 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~ 53 (249)
T 1o5i_A 18 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE 53 (249)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4456889987 6889999999999999999999874
No 482
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=85.29 E-value=1 Score=43.90 Aligned_cols=35 Identities=20% Similarity=0.374 Sum_probs=31.4
Q ss_pred CCCcEEEECC-ChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGA-GVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGa-G~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
....|+|.|| |-.|..++..|.++|++|+++.|..
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3457999998 9999999999999999999999864
No 483
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=85.26 E-value=0.72 Score=46.12 Aligned_cols=35 Identities=23% Similarity=0.368 Sum_probs=32.2
Q ss_pred CCCcEEEECC-ChHHHHHHHHHhhCCC---cEEEEecCC
Q 040732 65 AGPDVIVVGA-GVAGAALAHTLGTDGR---RVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGa-G~aGl~~A~~La~~G~---~V~viEr~~ 99 (541)
....|+|+|| |.+|+.++..+...|. +|+++|++.
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~ 251 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKE 251 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccc
Confidence 4578999999 9999999999999998 999999875
No 484
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=85.21 E-value=0.88 Score=44.55 Aligned_cols=37 Identities=27% Similarity=0.408 Sum_probs=31.0
Q ss_pred CCCCcEEEECC-ChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 64 VAGPDVIVVGA-GVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 64 ~~~~dVvIVGa-G~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
.....|+|.|| |-.|..++..|.++|++|+++.|.+.
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 34567999999 99999999999999999999999863
No 485
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=85.15 E-value=0.72 Score=50.39 Aligned_cols=33 Identities=21% Similarity=0.410 Sum_probs=31.1
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999875
No 486
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=84.85 E-value=0.86 Score=46.37 Aligned_cols=31 Identities=35% Similarity=0.467 Sum_probs=28.9
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCC---cEEEEe
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGR---RVHVIE 96 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~---~V~viE 96 (541)
...|+|+|||-||.++|..|.+.|. +|.|++
T Consensus 186 ~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 186 EITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 3579999999999999999999998 799999
No 487
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=84.77 E-value=0.68 Score=46.84 Aligned_cols=35 Identities=37% Similarity=0.493 Sum_probs=31.2
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
....|+|||+|..|.++|..|...|. +|++++|..
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 34579999999999999999999998 899999864
No 488
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=84.64 E-value=0.67 Score=43.63 Aligned_cols=30 Identities=27% Similarity=0.271 Sum_probs=27.9
Q ss_pred cEEEECCChHHHHHHHHHhhCCCcEEEEec
Q 040732 68 DVIVVGAGVAGAALAHTLGTDGRRVHVIER 97 (541)
Q Consensus 68 dVvIVGaG~aGl~~A~~La~~G~~V~viEr 97 (541)
.|.|||+|-.|..+|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 589999999999999999999999999765
No 489
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=84.56 E-value=0.44 Score=46.81 Aligned_cols=33 Identities=12% Similarity=0.104 Sum_probs=30.2
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
...|+|+|+|..|..+|..|.++|+ |+++|+++
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~ 147 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 147 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGG
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCCh
Confidence 4579999999999999999999999 99999986
No 490
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=84.15 E-value=0.88 Score=44.84 Aligned_cols=34 Identities=29% Similarity=0.321 Sum_probs=30.5
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
.-.|+|+|+|+.|++++..++..|.+|+++++.+
T Consensus 177 g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~ 210 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNE 210 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4579999999999999999988999999998775
No 491
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=84.15 E-value=1.1 Score=44.52 Aligned_cols=34 Identities=32% Similarity=0.480 Sum_probs=30.8
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERD 98 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~ 98 (541)
....|+|+|+|-.|..+|..|.+.|.+|++.|++
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 3467999999999999999999999999999864
No 492
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=84.15 E-value=0.75 Score=50.25 Aligned_cols=33 Identities=30% Similarity=0.415 Sum_probs=31.3
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..|.|||||..|...|..+++.|++|+++|.++
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 579999999999999999999999999999875
No 493
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=84.04 E-value=0.69 Score=49.36 Aligned_cols=34 Identities=38% Similarity=0.564 Sum_probs=31.3
Q ss_pred CCcEEEECCChHHHHHHHHHhhCCC-cEEEEecCC
Q 040732 66 GPDVIVVGAGVAGAALAHTLGTDGR-RVHVIERDM 99 (541)
Q Consensus 66 ~~dVvIVGaG~aGl~~A~~La~~G~-~V~viEr~~ 99 (541)
...|+|||+|..|+.+|..|++.|+ +++|+|.+.
T Consensus 17 ~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~ 51 (640)
T 1y8q_B 17 GGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDT 51 (640)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCB
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCE
Confidence 4589999999999999999999998 899999875
No 494
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=83.84 E-value=0.75 Score=46.85 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=31.1
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
+....-|||.|-.|+.+|..|++.|++|+++|+++
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 34568899999999999999999999999999986
No 495
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=83.71 E-value=1.1 Score=47.19 Aligned_cols=37 Identities=35% Similarity=0.522 Sum_probs=33.9
Q ss_pred CCCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 64 VAGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 64 ~~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
+..||+||||||++|+++|..|++.|.+|+|+|+...
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3569999999999999999999999999999999864
No 496
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=83.61 E-value=0.62 Score=44.65 Aligned_cols=32 Identities=25% Similarity=0.422 Sum_probs=29.5
Q ss_pred CcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 67 PDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 67 ~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
..|.|||+|-.|...|..|++.|++|++++ ++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 369999999999999999999999999998 64
No 497
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=83.61 E-value=1.1 Score=45.49 Aligned_cols=36 Identities=28% Similarity=0.398 Sum_probs=32.1
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
....|+|+|+|..|..++.++.+.|++|.++|..+.
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 445899999999999999999999999999987643
No 498
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=83.59 E-value=1.2 Score=42.50 Aligned_cols=34 Identities=32% Similarity=0.519 Sum_probs=30.9
Q ss_pred CcEEEECC-ChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 67 PDVIVVGA-GVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 67 ~dVvIVGa-G~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
+.|+|.|| |-.|..++..|.++|++|+++-|++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 36999999 99999999999999999999998753
No 499
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=83.48 E-value=0.95 Score=45.83 Aligned_cols=35 Identities=40% Similarity=0.407 Sum_probs=32.2
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDM 99 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~ 99 (541)
....|+|||.|..|..+|..|...|.+|+++|+++
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p 244 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDP 244 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCh
Confidence 45689999999999999999999999999999865
No 500
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=83.46 E-value=1 Score=47.69 Aligned_cols=36 Identities=11% Similarity=0.215 Sum_probs=32.8
Q ss_pred CCCcEEEECCChHHHHHHHHHhhCCCcEEEEecCCC
Q 040732 65 AGPDVIVVGAGVAGAALAHTLGTDGRRVHVIERDMT 100 (541)
Q Consensus 65 ~~~dVvIVGaG~aGl~~A~~La~~G~~V~viEr~~~ 100 (541)
.+..|+|||+|..|..+|..|.+.|++|+++|+++.
T Consensus 126 ~~~hviI~G~g~~g~~la~~L~~~~~~vvvid~~~~ 161 (565)
T 4gx0_A 126 TRGHILIFGIDPITRTLIRKLESRNHLFVVVTDNYD 161 (565)
T ss_dssp CCSCEEEESCCHHHHHHHHHTTTTTCCEEEEESCHH
T ss_pred cCCeEEEECCChHHHHHHHHHHHCCCCEEEEECCHH
Confidence 445899999999999999999999999999998863
Done!