RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 040733
(643 letters)
>d1ybha2 c.36.1.5 (A:86-280) Acetohydroxyacid synthase catalytic
subunit {Thale cress (Arabidopsis thaliana), chloroplast
[TaxId: 3702]}
Length = 195
Score = 208 bits (531), Expect = 2e-64
Identities = 139/194 (71%), Positives = 174/194 (89%), Gaps = 1/194 (0%)
Query: 60 FSSRFAPDKPRKGADIIVEALERQGVTTVFAYPGGASIEIHQSLTRSN-IRSILPRHEQG 118
F SRFAPD+PRKGADI+VEALERQGV TVFAYPGGAS+EIHQ+LTRS+ IR++LPRHEQG
Sbjct: 2 FISRFAPDQPRKGADILVEALERQGVETVFAYPGGASMEIHQALTRSSSIRNVLPRHEQG 61
Query: 119 GIFAAEGYARSSGTPGVCLVSSGPGVTNIMTGLMDAYSDSIPILAITGQVSQKLLGTDAF 178
G+FAAEGYARSSG PG+C+ +SGPG TN+++GL DA DS+P++AITGQV ++++GTDAF
Sbjct: 62 GVFAAEGYARSSGKPGICIATSGPGATNLVSGLADALLDSVPLVAITGQVPRRMIGTDAF 121
Query: 179 QEIPVVEVTRYMTKHNYLVLDVDDIPRIIKEAFFIATSGRPGPVLIDIPVDVQLELAVPN 238
QE P+VEVTR +TKHNYLV+DV+DIPRII+EAFF+ATSGRPGPVL+D+P D+Q +LA+PN
Sbjct: 122 QETPIVEVTRSITKHNYLVMDVEDIPRIIEEAFFLATSGRPGPVLVDVPKDIQQQLAIPN 181
Query: 239 WNQPCKLPSCISSL 252
W Q +LP +S +
Sbjct: 182 WEQAMRLPGYMSRM 195
>d1ybha3 c.36.1.9 (A:460-667) Acetohydroxyacid synthase catalytic
subunit {Thale cress (Arabidopsis thaliana), chloroplast
[TaxId: 3702]}
Length = 208
Score = 178 bits (453), Expect = 6e-53
Identities = 147/209 (70%), Positives = 179/209 (85%), Gaps = 1/209 (0%)
Query: 432 EEIPPQYAIQILNELTDDEETIISTGVGQHQMWAIQFYMYKRARQLLTSSGFGSMGFGLP 491
E IPPQYAI++L+ELTD + IISTGVGQHQMWA QFY YK+ RQ L+S G G+MGFGLP
Sbjct: 1 EAIPPQYAIKVLDELTDGK-AIISTGVGQHQMWAAQFYNYKKPRQWLSSGGLGAMGFGLP 59
Query: 492 AAMGAAVANPGAIVVDIDGDGSFIMNLQELAAIKAENIPVKILLINNQYLGMNVEYEDRY 551
AA+GA+VANP AIVVDIDGDGSFIMN+QELA I+ EN+PVK+LL+NNQ+LGM +++EDR+
Sbjct: 60 AAIGASVANPDAIVVDIDGDGSFIMNVQELATIRVENLPVKVLLLNNQHLGMVMQWEDRF 119
Query: 552 FEANRANSFLGDPLRKSEIFPDMLKFAEACGIPAARVTKKKDVRAAIQLMLETPGPYLLD 611
++ANRA++FLGDP ++ EIFP+ML FA ACGIPAARVTKK D+R AIQ ML+TPGPYLLD
Sbjct: 120 YKANRAHTFLGDPAQEDEIFPNMLLFAAACGIPAARVTKKADLREAIQTMLDTPGPYLLD 179
Query: 612 VMVSYQEHVVPMIPYDKSFKDTILEDDGR 640
V+ +QEHV+PMIP +F D I E DGR
Sbjct: 180 VICPHQEHVLPMIPSGGTFNDVITEGDGR 208
Score = 30.2 bits (67), Expect = 0.63
Identities = 8/47 (17%), Positives = 14/47 (29%), Gaps = 5/47 (10%)
Query: 183 VVEVTRYMTKHNYLVLDVDDIPRIIKEAFFIATSGRPGPVLIDIPVD 229
++ V D+ I+ PGP L+D+
Sbjct: 142 MLLFAAACGIPAARVTKKADLREAIQTML-----DTPGPYLLDVICP 183
>d1t9ba2 c.36.1.5 (A:89-263) Acetohydroxyacid synthase catalytic
subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 175
Score = 168 bits (426), Expect = 1e-49
Identities = 85/163 (52%), Positives = 112/163 (68%), Gaps = 1/163 (0%)
Query: 72 GADIIVEALERQGVTTVFAYPGGASIEIHQSLTRSNI-RSILPRHEQGGIFAAEGYARSS 130
G I E + RQ V TVF YPGGA + ++ ++ S+ +LP+HEQG AEGYAR+S
Sbjct: 6 GGQIFNEMMSRQNVDTVFGYPGGAILPVYDAIHNSDKFNFVLPKHEQGAGHMAEGYARAS 65
Query: 131 GTPGVCLVSSGPGVTNIMTGLMDAYSDSIPILAITGQVSQKLLGTDAFQEIPVVEVTRYM 190
G PGV LV+SGPG TN++T + DA++D IP++ TGQV +GTDAFQE VV ++R
Sbjct: 66 GKPGVVLVTSGPGATNVVTPMADAFADGIPMVVFTGQVPTSAIGTDAFQEADVVGISRSC 125
Query: 191 TKHNYLVLDVDDIPRIIKEAFFIATSGRPGPVLIDIPVDVQLE 233
TK N +V V+++P I EAF IATSGRPGPVL+D+P DV
Sbjct: 126 TKWNVMVKSVEELPLRINEAFEIATSGRPGPVLVDLPKDVTAA 168
>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic
subunit {Thale cress (Arabidopsis thaliana), chloroplast
[TaxId: 3702]}
Length = 179
Score = 158 bits (401), Expect = 4e-46
Identities = 113/179 (63%), Positives = 133/179 (74%)
Query: 253 PKEPDELALRQTLKLIVESKNPVLCVGGGCLNSSEELRKFVGLTGIPVTCTTMGLGLFPC 312
PK P++ L Q ++LI ESK PVL VGGGCLNSS+EL +FV LTGIPV T MGLG +PC
Sbjct: 1 PKPPEDSHLEQIVRLISESKKPVLYVGGGCLNSSDELGRFVELTGIPVASTLMGLGSYPC 60
Query: 313 TDELCLRMVGMFGTVYANYAVNECDLLLAAGVRFNERMTSKLEDFATRAKIVHIDIDSNE 372
DEL L M+GM GTVYANYAV DLLLA GVRF++R+T KLE FA+RAKIVHIDIDS E
Sbjct: 61 DDELSLHMLGMHGTVYANYAVEHSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAE 120
Query: 373 IGKVKLPDVSICADAKLVFNRMNMILESKGVGFMFDFSAWREELHEQKKKYPFSYKTFG 431
IGK K P VS+C D KL MN +LE++ DF WR EL+ QK+K+P S+KTFG
Sbjct: 121 IGKNKTPHVSVCGDVKLALQGMNKVLENRAEELKLDFGVWRNELNVQKQKFPLSFKTFG 179
>d1t9ba3 c.36.1.9 (A:461-687) Acetohydroxyacid synthase catalytic
subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 227
Score = 133 bits (334), Expect = 4e-36
Identities = 81/216 (37%), Positives = 130/216 (60%), Gaps = 10/216 (4%)
Query: 425 FSYKTFGEEIPPQYAIQILNELTDD--EETIISTGVGQHQMWAIQFYMYKRARQLLTSSG 482
+ +T G +I PQ I+ L+++ +D I++TGVGQHQMWA Q + ++ +TS G
Sbjct: 2 YMEETPGSKIKPQTVIKKLSKVANDTGRHVIVTTGVGQHQMWAAQHWTWRNPHTFITSGG 61
Query: 483 FGSMGFGLPAAMGAAVANPGAIVVDIDGDGSFIMNLQELAAIKAENIPVKILLINNQYLG 542
G+MG+GLPAA+GA VA P ++V+DIDGD SF M L EL++ PVKIL++NN+ G
Sbjct: 62 LGTMGYGLPAAIGAQVAKPESLVIDIDGDASFNMTLTELSSAVQAGTPVKILILNNEEQG 121
Query: 543 MNVEYEDRYFEANRANSFLGDPLRKSEIFPDMLKFAEACGIPAARVTKKKDVRAAIQLML 602
M +++ ++E +++ ++ PD +K AEA G+ RV K++++ A ++ +
Sbjct: 122 MVTQWQSLFYEHRYSHTH--------QLNPDFIKLAEAMGLKGLRVKKQEELDAKLKEFV 173
Query: 603 ETPGPYLLDVMVSYQEHVVPMIPYDKSFKDTILEDD 638
T GP LL+V V + V+PM+ + I D
Sbjct: 174 STKGPVLLEVEVDKKVPVLPMVAGGSGLDEFINFDP 209
Score = 29.1 bits (64), Expect = 1.3
Identities = 10/46 (21%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Query: 184 VEVTRYMTKHNYLVLDVDDIPRIIKEAFFIATSGRPGPVLIDIPVD 229
+++ M V +++ +KE GPVL+++ VD
Sbjct: 146 IKLAEAMGLKGLRVKKQEELDAKLKEFV-----STKGPVLLEVEVD 186
>d1ytla1 c.31.1.6 (A:17-174) Acetyl-CoA decarbonylase/synthase
complex epsilon subunit 2, ACDE2 {Archaeoglobus fulgidus
[TaxId: 2234]}
Length = 158
Score = 124 bits (313), Expect = 6e-34
Identities = 26/151 (17%), Positives = 51/151 (33%), Gaps = 13/151 (8%)
Query: 260 ALRQTLKLIVESKNPVLCVGGGCLNSSEELRKFVGLTGIPVTCTT------MGLGLFPCT 313
+ +I ++K P+L VG + E K I V T + GL
Sbjct: 8 KGKPVANMIKKAKRPLLIVGPDMTDEMFERVKKFVEKDITVVATGSAITRFIDAGLGEKV 67
Query: 314 DELCLRMVGMFGTVYANYAV---NECDLLLAAGVRF--NERMTSKLEDFATRAKIVHIDI 368
+ L + F DL+L G + +M + +++FA + + ID
Sbjct: 68 NYAVLHELTQFLLDPDWKGFDGQGNYDLVLMLGSIYYHGSQMLAAIKNFAPHIRALAIDR 127
Query: 369 DSNEIGKVKLPDVSICADAKLVFNRMNMILE 399
+ + + + + ++ IL
Sbjct: 128 YYHPNADMSFGN--LWKKEEDYLKLLDEILA 156
>d1ozha2 c.36.1.5 (A:7-187) Catabolic acetolactate synthase
{Klebsiella pneumoniae [TaxId: 573]}
Length = 181
Score = 119 bits (298), Expect = 1e-31
Identities = 59/164 (35%), Positives = 85/164 (51%)
Query: 68 KPRKGADIIVEALERQGVTTVFAYPGGASIEIHQSLTRSNIRSILPRHEQGGIFAAEGYA 127
+ GAD++V LE QGV VF PG ++ SL S+IR I RHE F A
Sbjct: 3 QWAHGADLVVSQLEAQGVRQVFGIPGAKIDKVFDSLLDSSIRIIPVRHEANAAFMAAAVG 62
Query: 128 RSSGTPGVCLVSSGPGVTNIMTGLMDAYSDSIPILAITGQVSQKLLGTDAFQEIPVVEVT 187
R +G GV LV+SGPG +N++TG+ A S+ P++A+ G V + Q + V +
Sbjct: 63 RITGKAGVALVTSGPGCSNLITGMATANSEGDPVVALGGAVKRADKAKQVHQSMDTVAMF 122
Query: 188 RYMTKHNYLVLDVDDIPRIIKEAFFIATSGRPGPVLIDIPVDVQ 231
+TK+ V D + ++ AF A GRPG + +P DV
Sbjct: 123 SPVTKYAIEVTAPDALAEVVSNAFRAAEQGRPGSAFVSLPQDVV 166
>d1zpda3 c.36.1.9 (A:363-566) Pyruvate decarboxylase {Zymomonas
mobilis [TaxId: 542]}
Length = 204
Score = 116 bits (291), Expect = 2e-30
Identities = 39/206 (18%), Positives = 74/206 (35%), Gaps = 8/206 (3%)
Query: 434 IPPQYAIQILNELTDDEETIISTGVGQHQMWAIQFYMYKRARQLLTSSGFGSMGFGLPAA 493
+ + + L T + G A Q ++ +G +G+ +PAA
Sbjct: 3 LVNAEIARQVEALLTPN-TTVIAETGDSWFNA-QRMKLPNGARVEYEMQWGHIGWSVPAA 60
Query: 494 MGAAVANPGAIVVDIDGDGSFIMNLQELAAIKAENIPVKILLINNQYLGMNVEYEDRYFE 553
G AV P + + GDGSF + QE+A + +PV I LINN + V D +
Sbjct: 61 FGYAVGAPERRNILMVGDGSFQLTAQEVAQMVRLKLPVIIFLINNYGYTIEVMIHDGPYN 120
Query: 554 ANRANSFLGDPLRKSEIFPDMLKFAEACGIPAARVTKKKDVRAAI-QLMLETPGPYLLDV 612
+ + G + ++ + ++ AI + T GP L++
Sbjct: 121 NIKNWDYAGLM-----EVFNGNGGYDSGAAKGLKAKTGGELAEAIKVALANTDGPTLIEC 175
Query: 613 MVSYQEHVVPMIPYDKSFKDTILEDD 638
+ ++ ++ + K
Sbjct: 176 FIGREDCTEELVKWGKRVAAANSRKP 201
Score = 27.9 bits (61), Expect = 3.2
Identities = 7/40 (17%), Positives = 11/40 (27%), Gaps = 4/40 (10%)
Query: 190 MTKHNYLVLDVDDIPRIIKEAFFIATSGRPGPVLIDIPVD 229
++ IK A GP LI+ +
Sbjct: 143 GAAKGLKAKTGGELAEAIKVALANT----DGPTLIECFIG 178
>d1pvda2 c.36.1.5 (A:2-181) Pyruvate decarboxylase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 111 bits (279), Expect = 4e-29
Identities = 25/175 (14%), Positives = 57/175 (32%), Gaps = 10/175 (5%)
Query: 71 KGADIIVEALERQGVTTVFAYPGGASIEIHQSLTRSNIRSILPRHEQGGIFAAEGYARSS 130
+ E L++ V TVF PG ++ + + + A
Sbjct: 4 TLGKYLFERLKQVNVNTVFGLPGDFNLSLLDKIYEVEGMRWAGNANELNAAYAADGYARI 63
Query: 131 GTPGVCLVSSGPGVTNIMTGLMDAYSDSIPILAITGQVSQKLLGTDAFQE--------IP 182
+ + G G + + G+ +Y++ + +L + G S
Sbjct: 64 KGMSCIITTFGVGELSALNGIAGSYAEHVGVLHVVGVPSISSQAKQLLLHHTLGNGDFTV 123
Query: 183 VVEVTRYMTKHNYLVLDVDDIPRIIKEAFFIATSGRPGPVLIDIPVDVQLELAVP 237
++ +++ ++ D+ P I PV + +P ++ +L VP
Sbjct: 124 FHRMSANISETTAMITDIATAPAEIDRCIRTT-YVTQRPVYLGLPANLV-DLNVP 176
>d1ovma2 c.36.1.5 (A:3-180) Indole-3-pyruvate decarboxylase
{Enterobacter cloacae [TaxId: 550]}
Length = 178
Score = 111 bits (278), Expect = 5e-29
Identities = 37/178 (20%), Positives = 70/178 (39%), Gaps = 12/178 (6%)
Query: 69 PRKGADIIVEALERQGVTTVFAYPGGASIEIHQSLTRSN-IRSILPRHEQGGIFAAEGYA 127
P AD +++ L G +F PG +++ + S I + +E +AA+GYA
Sbjct: 2 PYCVADYLLDRLTDCGADHLFGVPGDYNLQFLDHVIDSPDICWVGCANELNASYAADGYA 61
Query: 128 RSSGTPGVCLVSSGPGVTNIMTGLMDAYSDSIPILAITGQVSQKLLGTDAFQE------- 180
R G + + G G + M G+ +Y++ +P+L I G
Sbjct: 62 RCKGFAALL-TTFGVGELSAMNGIAGSYAEHVPVLHIVGAPGTAAQQRGELLHHTLGDGE 120
Query: 181 -IPVVEVTRYMTKHNYLVLDVDDIPRIIKEAFFIATSGRPGPVLIDIPVDVQLELAVP 237
++ +T ++ + + I + + RPG + +P DV + A P
Sbjct: 121 FRHFYHMSEPITVAQAVLTEQNACYEIDRVLTTMLRERRPGY--LMLPADVAKKAATP 176
>d2ez9a2 c.36.1.5 (A:9-182) Pyruvate oxidase {Lactobacillus
plantarum [TaxId: 1590]}
Length = 174
Score = 111 bits (277), Expect = 5e-29
Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 4/172 (2%)
Query: 71 KGADIIVEALERQGVTTVFAYPGGASIEIHQSLTR--SNIRSILPRHEQGGIFAAEGYAR 128
+++ LE GV ++ PGG+ I +L+ I I RHE+ G AA A+
Sbjct: 4 LAGAAVIKVLEAWGVDHLYGIPGGSINSIMDALSAERDRIHYIQVRHEEVGAMAAAADAK 63
Query: 129 SSGTPGVCLVSSGPGVTNIMTGLMDAYSDSIPILAITGQVSQKLLGTDAFQEIPVVEVTR 188
+G GVC S+GPG T++M GL DA D +P+LA+ GQ + D FQE+ +
Sbjct: 64 LTGKIGVCFGSAGPGGTHLMNGLYDAREDHVPVLALIGQFGTTGMNMDTFQEMNENPIYA 123
Query: 189 YMTKHNYLVLDVDDIPRIIKEAFFIATSGRPGPVLIDIPVDVQL-ELAVPNW 239
+ +N ++ +P +I EA A G ++ IPVD+ ++ +W
Sbjct: 124 DVADYNVTAVNAATLPHVIDEAIRRAY-AHQGVAVVQIPVDLPWQQIPAEDW 174
>d2ihta3 c.36.1.9 (A:375-572) Carboxyethylarginine synthase
{Streptomyces clavuligerus [TaxId: 1901]}
Length = 198
Score = 111 bits (279), Expect = 6e-29
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 16/202 (7%)
Query: 428 KTFGEEIPPQYAIQILNELTDD----EETIISTGVGQHQMWAIQFYMYKRARQLLTSSGF 483
+T+ + + I +N + ++ E I + +G + + + F + LTS+G
Sbjct: 2 ETYEDGMRVHQVIDSMNTVMEEAAEPGEGTIVSDIGFFRHYGVLFARADQPFGFLTSAGC 61
Query: 484 GSMGFGLPAAMGAAVANPGAIVVDIDGDGSFIMNLQELAAIKAENIPVKILLINNQYLGM 543
S G+G+PAA+GA +A P I GDG F N +L I N+P+ +++NN G+
Sbjct: 62 SSFGYGIPAAIGAQMARPDQPTFLIAGDGGFHSNSSDLETIARLNLPIVTVVVNNDTNGL 121
Query: 544 NVEYEDRYFEANRANSFLGDPLRKSEIFPDMLKFAEACGIPAARVTKKKDVRAAIQLMLE 603
Y++ + + D + AEA G+ A R T ++++ AA++ E
Sbjct: 122 IELYQNIGHHRSHDPAVKFGG-------VDFVALAEANGVDATRATNREELLAALRKGAE 174
Query: 604 TPGPYLLDVMVSYQEHVVPMIP 625
P+L++V V+Y P
Sbjct: 175 LGRPFLIEVPVNY-----DFQP 191
Score = 29.5 bits (65), Expect = 1.0
Identities = 6/46 (13%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Query: 184 VEVTRYMTKHNYLVLDVDDIPRIIKEAFFIATSGRPGPVLIDIPVD 229
V + + +++ +++ P LI++PV+
Sbjct: 146 VALAEANGVDATRATNREELLAALRKGA-----ELGRPFLIEVPVN 186
>d2djia2 c.36.1.5 (A:3-186) Pyruvate oxidase {Aerococcus viridans
[TaxId: 1377]}
Length = 184
Score = 108 bits (271), Expect = 5e-28
Identities = 47/169 (27%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Query: 67 DKPRKGADIIVEALERQGVTTVFAYPGGASIEIHQSLTR--SNIRSILPRHEQGGIFAAE 124
D +++ LE G T++ P G + ++ +N++ + +HE+ G AA
Sbjct: 1 DNKINIGLAVMKILESWGADTIYGIPSGTLSSLMDAMGEEENNVKFLQVKHEEVGAMAAV 60
Query: 125 GYARSSGTPGVCLVSSGPGVTNIMTGLMDAYSDSIPILAITGQVSQKLLGTDAFQEIPVV 184
++ G GV + S GPG ++++ GL DA D+IP++AI G Q+ L DAFQE+
Sbjct: 61 MQSKFGGNLGVTVGSGGPGASHLINGLYDAAMDNIPVVAILGSRPQRELNMDAFQELNQN 120
Query: 185 EVTRYMTKHNYLVLDVDDIPRIIKEAFFIATSGRPGPVLIDIPVDVQLE 233
+ ++ +N V + +P+++ EA +A + R G ++++P D
Sbjct: 121 PMYDHIAVYNRRVAYAEQLPKLVDEAARMAIAKR-GVAVLEVPGDFAKV 168
>d1zpda2 c.36.1.5 (A:2-187) Pyruvate decarboxylase {Zymomonas
mobilis [TaxId: 542]}
Length = 186
Score = 106 bits (265), Expect = 4e-27
Identities = 36/193 (18%), Positives = 75/193 (38%), Gaps = 19/193 (9%)
Query: 72 GADIIVEALERQGVTTVFAYPGGASIEIHQSLTRSN-IRSILPRHEQGGIFAAEGYARSS 130
+ E L + G+ FA G ++ + +L + + + +E F+AEGYAR+
Sbjct: 4 VGTYLAERLVQIGLKHHFAVAGDYNLVLLDNLLLNKNMEQVYCCNELNCGFSAEGYARAK 63
Query: 131 GTPGVCLVSSGPGVTNIMTGLMDAYSDSIPILAITGQVSQKLLGTDAFQE--------IP 182
G V+ G + + AY++++P++ I+G +
Sbjct: 64 GAAAAV-VTYSVGALSAFDAIGGAYAENLPVILISGAPNNNDHAAGHVLHHALGKTDYHY 122
Query: 183 VVEVTRYMTKHNYLVLDVDDIPRIIKEAFFIATSGRPGPVLIDIPVDVQLELAVPNWNQP 242
+E+ + +T + ++ P I A + PV ++I ++ + P
Sbjct: 123 QLEMAKNITAAAEAIYTPEEAPAKIDHVIKTALREK-KPVYLEIACNIA--------SMP 173
Query: 243 CKLPSCISSLPKE 255
C P S+L +
Sbjct: 174 CAAPGPASALFND 186
>d1q6za2 c.36.1.5 (A:2-181) Benzoylformate decarboxylase
{Pseudomonas putida [TaxId: 303]}
Length = 180
Score = 105 bits (261), Expect = 9e-27
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 2/166 (1%)
Query: 73 ADIIVEALERQGVTTVFAYPGGASIEIHQSLTRSNIRSILPRHEQGGIFAAEGYARSSGT 132
E L RQG+ TVF PG ++ + + R IL E + A+GYA++S
Sbjct: 4 HGTTYELLRRQGIDTVFGNPGSNALPFLKDF-PEDFRYILALQEACVVGIADGYAQASRK 62
Query: 133 PGVCLVSSGPGVTNIMTGLMDAYSDSIPILAITGQVSQKLLGTDAFQ-EIPVVEVTRYMT 191
P + S G N M L +A++ P++ GQ ++ ++G +A + + R +
Sbjct: 63 PAFINLHSAAGTGNAMGALSNAWNSHSPLIVTAGQQTRAMIGVEALLTNVDAANLPRPLV 122
Query: 192 KHNYLVLDVDDIPRIIKEAFFIATSGRPGPVLIDIPVDVQLELAVP 237
K +Y ++P + A +A+ GPV + +P D + A P
Sbjct: 123 KWSYEPASAAEVPHAMSRAIHMASMAPQGPVYLSVPYDDWDKDADP 168
>d1ozha3 c.36.1.9 (A:367-558) Catabolic acetolactate synthase
{Klebsiella pneumoniae [TaxId: 573]}
Length = 192
Score = 105 bits (261), Expect = 1e-26
Identities = 41/190 (21%), Positives = 85/190 (44%), Gaps = 10/190 (5%)
Query: 434 IPPQYAIQILNELTDDEETIISTGVGQHQMWAIQFYMYKRARQLLTSSGFGSMGFGLPAA 493
+ P ++ + ++ + + ++ +G +W ++ RARQ++ S+G +MG LP A
Sbjct: 5 LHPLRIVRAMQDIVNSD-VTLTVDMGSFHIWIARYLYTFRARQVMISNGQQTMGVALPWA 63
Query: 494 MGAAVANPGAIVVDIDGDGSFIMNLQELAAIKAENIPVKILLINNQYLGMNVEYEDRYFE 553
+GA + NP VV + GDG F+ + EL V L+ + M E++ ++
Sbjct: 64 IGAWLVNPERKVVSVSGDGGFLQSSMELETAVRLKANVLHLIWVDNGYNMVAIQEEKKYQ 123
Query: 554 ANRANSFLGDPLRKSEIFPDMLKFAEACGIPAARVTKKKDVRAAIQLMLETPGPYLLDVM 613
F D +AE+ G V + + ++ ++ GP ++ +
Sbjct: 124 RLSGVEFGP---------MDFKAYAESFGAKGFAVESAEALEPTLRAAMDVDGPAVVAIP 174
Query: 614 VSYQEHVVPM 623
V Y+++ + M
Sbjct: 175 VDYRDNPLLM 184
Score = 33.0 bits (74), Expect = 0.064
Identities = 9/52 (17%), Positives = 17/52 (32%), Gaps = 5/52 (9%)
Query: 178 FQEIPVVEVTRYMTKHNYLVLDVDDIPRIIKEAFFIATSGRPGPVLIDIPVD 229
F + + V + + ++ A GP ++ IPVD
Sbjct: 130 FGPMDFKAYAESFGAKGFAVESAEALEPTLRAAM-----DVDGPAVVAIPVD 176
>d2ji7a2 c.36.1.5 (A:7-194) Oxalyl-CoA decarboxylase {Oxalobacter
formigenes [TaxId: 847]}
Length = 188
Score = 104 bits (259), Expect = 2e-26
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 2/166 (1%)
Query: 70 RKGADIIVEALERQGVTTVFAYPGGASIEIHQSLTRSNIRSILPRHEQGGIFAAEGYARS 129
G ++++AL+ + T++ G + + R RHEQ +AA
Sbjct: 4 TDGFHVLIDALKMNDIDTMYGVVGIPITNLARMWQDDGQRFYSFRHEQHAGYAASIAGYI 63
Query: 130 SGTPGVCLVSSGPGVTNIMTGLMDAYSDSIPILAITGQVSQKL--LGTDAFQEIPVVEVT 187
G PGVCL S PG N +T L A ++ P++ ++G +++ L ++E+ + V
Sbjct: 64 EGKPGVCLTVSAPGFLNGVTSLAHATTNCFPMILLSGSSEREIVDLQQGDYEEMDQMNVA 123
Query: 188 RYMTKHNYLVLDVDDIPRIIKEAFFIATSGRPGPVLIDIPVDVQLE 233
R K ++ + + DIP I A A SGRPG V +D+P + +
Sbjct: 124 RPHCKASFRINSIKDIPIGIARAVRTAVSGRPGGVYVDLPAKLFGQ 169
>d1t9ba1 c.31.1.3 (A:290-460) Acetohydroxyacid synthase catalytic
subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 171
Score = 101 bits (252), Expect = 1e-25
Identities = 56/175 (32%), Positives = 84/175 (48%), Gaps = 17/175 (9%)
Query: 263 QTLKLIVESKNPVLCVGGGCLNSS---EELRKFVGLTGIPVTCTTMGLGLFPCTDELCLR 319
+ LI +K PVL VG G LN + L++ IPVT T GLG F D L
Sbjct: 2 KAADLINLAKKPVLYVGAGILNHADGPRLLKELSDRAQIPVTTTLQGLGSFDQEDPKSLD 61
Query: 320 MVGMFGTVYANYAVNECDLLLAAGVRFNERMTSKLEDFATRAK---------IVHIDIDS 370
M+GM G AN AV DL++A G RF++R+T + FA A+ I+H ++
Sbjct: 62 MLGMHGCATANLAVQNADLIIAVGARFDDRVTGNISKFAPEARRAAAEGRGGIIHFEVSP 121
Query: 371 NEIGKVKLPDVSICADAKLVFNRMNMILESKGVGFMFDFSAWREELHEQKKKYPF 425
I KV +++ DA +M + + S W ++++ KK+YP+
Sbjct: 122 KNINKVVQTQIAVEGDATTNLGKMMSKIFPVK-----ERSEWFAQINKWKKEYPY 171
>d1pvda1 c.31.1.3 (A:182-360) Pyruvate decarboxylase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 179
Score = 101 bits (251), Expect = 3e-25
Identities = 30/152 (19%), Positives = 50/152 (32%), Gaps = 3/152 (1%)
Query: 253 PKEPDELALRQTLKLIVESKNPVLCVGGGCLNS--SEELRKFVGLTGIPVTCTTMGLGLF 310
E ++ + L L+ ++KNPV+ C E +K + LT P T MG G
Sbjct: 12 DAESEKEVIDTILALVKDAKNPVILADACCSRHDVKAETKKLIDLTQFPAFVTPMGKGSI 71
Query: 311 PCTDELCLRMVG-MFGTVYANYAVNECDLLLAAGVRFNERMTSKLEDFATRAKIVHIDID 369
+ AV DL+L+ G ++ T IV D
Sbjct: 72 SEQHPRYGGVYVGTLSKPEVKEAVESADLILSVGALLSDFNTGSFSYSYKTKNIVEFHSD 131
Query: 370 SNEIGKVKLPDVSICADAKLVFNRMNMILESK 401
+I P V + + + + +
Sbjct: 132 HMKIRNATFPGVQMKFVLQKLLTNIADAAKGY 163
>d2djia3 c.36.1.9 (A:364-592) Pyruvate oxidase {Aerococcus viridans
[TaxId: 1377]}
Length = 229
Score = 101 bits (251), Expect = 8e-25
Identities = 39/194 (20%), Positives = 72/194 (37%), Gaps = 14/194 (7%)
Query: 433 EIPPQYAIQILNELTDDEETIISTGVGQHQMWAIQFYMYKRARQLLTSSGFGSMGFGLPA 492
++ +N D++ I S VG +I+ TS F +MG +P
Sbjct: 2 DLQFYQVYNAINNHADED-AIYSIDVGNSTQTSIRHLHMTPKNMWRTSPLFATMGIAIPG 60
Query: 493 AMGAAVANPGAIVVDIDGDGSFIMNLQELAAIKAENIPVKILLINNQYLGMNVEYEDRYF 552
+GA P V +I GDG+F M ++ N+PV ++ +N +
Sbjct: 61 GLGAKNTYPDRQVWNIIGDGAFSMTYPDVVTNVRYNMPVINVVFSNTEYAFIKNKYEDTN 120
Query: 553 EANRANSFLGDPLRKSEIFPDMLKFAEACGIPAARVTKKKDVRAAIQLMLE---TPGPYL 609
+ F D K AEA G V++ +D+ + + +
Sbjct: 121 KNLFGVDF---------TDVDYAKIAEAQGAKGFTVSRIEDMDRVMAEAVAANKAGHTVV 171
Query: 610 LDVMVSYQEHVVPM 623
+D ++ Q+ +P+
Sbjct: 172 IDCKIT-QDRPIPV 184
>d2ihta2 c.36.1.5 (A:12-197) Carboxyethylarginine synthase
{Streptomyces clavuligerus [TaxId: 1901]}
Length = 186
Score = 99.3 bits (246), Expect = 1e-24
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 2/172 (1%)
Query: 72 GADIIVEALERQGVTTVFAYPGGASIEIHQSLTRSNIRSILPRHEQGGIFAAEGYARSSG 131
A ++ L GV VF G + I I +L RHE AA+ AR +G
Sbjct: 3 AAHALLSRLRDHGVGKVFGVVGREAASILFDE-VEGIDFVLTRHEFTAGVAADVLARITG 61
Query: 132 TPGVCLVSSGPGVTNIMTGLMDAYSDSIPILAITGQVSQK-LLGTDAFQEIPVVEVTRYM 190
P C + GPG+TN+ TG+ + D P++A+ Q + D Q + V + M
Sbjct: 62 RPQACWATLGPGMTNLSTGIATSVLDRSPVIALAAQSESHDIFPNDTHQCLDSVAIVAPM 121
Query: 191 TKHNYLVLDVDDIPRIIKEAFFIATSGRPGPVLIDIPVDVQLELAVPNWNQP 242
+K+ + +I ++ A A + GP I +PVD+ + P
Sbjct: 122 SKYAVELQRPHEITDLVDSAVNAAMTEPVGPSFISLPVDLLGSSEGIDTTVP 173
>d2ihta1 c.31.1.3 (A:198-374) Carboxyethylarginine synthase
{Streptomyces clavuligerus [TaxId: 1901]}
Length = 177
Score = 98.9 bits (245), Expect = 1e-24
Identities = 41/174 (23%), Positives = 58/174 (33%), Gaps = 7/174 (4%)
Query: 255 EPDELALRQTLKLIVESKNPVLCVGGGCLNS--SEELRKFVGLTGIPVTCTTMGLGLFPC 312
+ + A Q L+ E+K+PVL VG + S +R IPV T + G+ P
Sbjct: 3 DGWQKAADQAAALLAEAKHPVLVVGAAAIRSGAVPAIRALAERLNIPVITTYIAKGVLPV 62
Query: 313 TDELCLRMVGMFGTV-----YANYAVNECDLLLAAGVRFNERMTSKLEDFATRAKIVHID 367
EL V + DL+L G + E + + K V I
Sbjct: 63 GHELNYGAVTGYMDGILNFPALQTMFAPVDLVLTVGYDYAEDLRPSMWQKGIEKKTVRIS 122
Query: 368 IDSNEIGKVKLPDVSICADAKLVFNRMNMILESKGVGFMFDFSAWREELHEQKK 421
N I +V PDV + D S G D R + E
Sbjct: 123 PTVNPIPRVYRPDVDVVTDVLAFVEHFETATASFGAKQRHDIEPLRARIAEFLA 176
>d2ji7a3 c.36.1.9 (A:370-552) Oxalyl-CoA decarboxylase {Oxalobacter
formigenes [TaxId: 847]}
Length = 183
Score = 98.8 bits (245), Expect = 2e-24
Identities = 33/188 (17%), Positives = 71/188 (37%), Gaps = 12/188 (6%)
Query: 434 IPPQYAIQILNE-LTDDEETIISTGVGQHQMWAIQFYMYKRARQLLTSSGFGSMGFGLPA 492
+ ++ ++ + + + + + + R+ L S +G MG G+
Sbjct: 6 MNYSNSLGVVRDFMLANPDISLVNEGANALDNTRMIVDMLKPRKRLDSGTWGVMGIGMG- 64
Query: 493 AMGAAVANPGAIVVDIDGDGSFIMNLQELAAIKAENIPVKILLINNQYLGMNVEYEDRYF 552
AA A G V+ ++GD +F + EL I N+PV ++++NN + E + +
Sbjct: 65 YCVAAAAVTGKPVIAVEGDSAFGFSGMELETICRYNLPVTVIIMNNGGIYKGNEADPQPG 124
Query: 553 EANRANSFLGDPLRKSEIFPDMLKFAEACGIPAARVTKKKDVRAAIQLMLETPGPYLLDV 612
+ EA G +++AA++ + + P L++
Sbjct: 125 VISCTRLT----------RGRYDMMMEAFGGKGYVANTPAELKAALEEAVASGKPCLINA 174
Query: 613 MVSYQEHV 620
M+ V
Sbjct: 175 MIDPDAGV 182
Score = 29.5 bits (65), Expect = 0.78
Identities = 7/37 (18%), Positives = 14/37 (37%), Gaps = 5/37 (13%)
Query: 193 HNYLVLDVDDIPRIIKEAFFIATSGRPGPVLIDIPVD 229
Y+ ++ ++EA P LI+ +D
Sbjct: 146 KGYVANTPAELKAALEEAV-----ASGKPCLINAMID 177
>d1ovma3 c.36.1.9 (A:356-551) Indole-3-pyruvate decarboxylase
{Enterobacter cloacae [TaxId: 550]}
Length = 196
Score = 98.5 bits (244), Expect = 3e-24
Identities = 35/196 (17%), Positives = 72/196 (36%), Gaps = 19/196 (9%)
Query: 434 IPPQYAIQILNELTDDEETIISTGVGQHQMWAIQFYMYKRARQLLTSSGFGSMGFGLPAA 493
+ + + L II G AI + + +GS+G+ L AA
Sbjct: 5 LTQENFWRTLQTFIR-PGDIILADQGTSAFGAIDLRLPAD-VNFIVQPLWGSIGYTLAAA 62
Query: 494 MGAAVANPGAIVVDIDGDGSFIMNLQELAAIKAENIPVKILLINNQYLGMNVEYEDRYFE 553
GA A P V+ + GDG+ + +QEL ++ + IL++NN+ +
Sbjct: 63 FGAQTACPNRRVIVLTGDGAAQLTIQELGSMLRDKQHPIILVLNNEGYTVERAIHGAEQR 122
Query: 554 ANRANSFLGDPLRKSEIFPDMLKFAEACGI----PAARVTKKKDVRAAIQLMLETPGPYL 609
N + +A + RV++ + + ++ + L
Sbjct: 123 YND------------IALWNWTHIPQALSLDPQSECWRVSEAEQLADVLEKVAHHERLSL 170
Query: 610 LDVMVSYQEHVVPMIP 625
++VM+ + + P++
Sbjct: 171 IEVMLP-KADIPPLLG 185
>d1ovma1 c.31.1.3 (A:181-341) Indole-3-pyruvate decarboxylase
{Enterobacter cloacae [TaxId: 550]}
Length = 161
Score = 96.3 bits (239), Expect = 6e-24
Identities = 24/141 (17%), Positives = 44/141 (31%), Gaps = 3/141 (2%)
Query: 258 ELALRQTLKLIVESKNPVLCVGGGCLNS--SEELRKFVGLTGIPVTCTTMGLGLFPCTDE 315
+ + SK L L L+K+V + MG G+F
Sbjct: 16 KAFRDAAENKLAMSKRTALLADFLVLRHGLKHALQKWVKEVPMAHATMLMGKGIFDERQA 75
Query: 316 LCLRMV-GMFGTVYANYAVNECDLLLAAGVRFNERMTSKLEDFATRAKIVHIDIDSNEIG 374
G T A+ D +L G RF + +T+ T A+ + + + +G
Sbjct: 76 GFYGTYSGSASTGAVKEAIEGADTVLCVGTRFTDTLTAGFTHQLTPAQTIEVQPHAARVG 135
Query: 375 KVKLPDVSICADAKLVFNRMN 395
V + + + +
Sbjct: 136 DVWFTGIPMNQAIETLVELCK 156
>d1q6za3 c.36.1.9 (A:342-524) Benzoylformate decarboxylase
{Pseudomonas putida [TaxId: 303]}
Length = 183
Score = 97.0 bits (240), Expect = 6e-24
Identities = 39/191 (20%), Positives = 67/191 (35%), Gaps = 10/191 (5%)
Query: 424 PFSYKTFGEEIPPQYAIQILNELTDDEETIISTGVGQHQMWAIQFYMYKRARQLLTSSGF 483
P + P+ LN++ + I Q +
Sbjct: 2 PAKVDQDAGRLHPETVFDTLNDMAPEN-AIYLNESTSTTAQMWQRLNMRNPGSY-YFCAA 59
Query: 484 GSMGFGLPAAMGAAVANPGAIVVDIDGDGSFIMNLQELAAIKAENIPVKILLINNQYLGM 543
G +GF LPAA+G +A P V+ + GDGS ++ L NIP +++NN G
Sbjct: 60 GGLGFALPAAIGVQLAEPERQVIAVIGDGSANYSISALWTAAQYNIPTIFVIMNNGTYGA 119
Query: 544 NVEYEDRYFEANRANSFLGDPLRKSEIFPDMLKFAEACGIPAARVTKKKDVRAAIQLMLE 603
+ N + D A+ G+ A + + ++ ++Q L
Sbjct: 120 LRWFAGVLEAENVPGLDVPGI--------DFRALAKGYGVQALKADNLEQLKGSLQEALS 171
Query: 604 TPGPYLLDVMV 614
GP L++V
Sbjct: 172 AKGPVLIEVST 182
>d1pvda3 c.36.1.9 (A:361-556) Pyruvate decarboxylase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 96.4 bits (239), Expect = 2e-23
Identities = 29/200 (14%), Positives = 63/200 (31%), Gaps = 23/200 (11%)
Query: 434 IPPQYAIQILNELTDDEETIISTGVGQHQMWAIQFYMYKRARQLLTSSGFGSMGFGLPAA 493
+ ++ L + ++ G Q ++ +GS+GF A
Sbjct: 5 LKQEWMWNQLGNFLQEG-DVVIAETGTSAFGINQTTFPNN-TYGISQVLWGSIGFTTGAT 62
Query: 494 MGAA----VANPGAIVVDIDGDGSFIMNLQELAAIKAENIPVKILLINNQYLGMNVEYED 549
+GAA +P V+ GDGS + +QE++ + + + ++NN +
Sbjct: 63 LGAAFAAEEIDPKKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGYTIEKLIHG 122
Query: 550 RYFEANRANSFLGDPLRKSEIFPDMLKFAEACGIP---AARVTKKKDVRAAIQ--LMLET 604
+ N D L G RV + Q +
Sbjct: 123 PKAQYNEIQ------------GWDHLSLLPTFGAKDYETHRVATTGEWDKLTQDKSFNDN 170
Query: 605 PGPYLLDVMVSYQEHVVPMI 624
++++M+ + ++
Sbjct: 171 SKIRMIEIMLPVFDAPQNLV 190
Score = 27.1 bits (59), Expect = 5.9
Identities = 4/37 (10%), Positives = 13/37 (35%), Gaps = 3/37 (8%)
Query: 193 HNYLVLDVDDIPRIIKEAFFIATSGRPGPVLIDIPVD 229
+ V + ++ ++ F +I+I +
Sbjct: 148 ETHRVATTGEWDKLTQDKSFNDN---SKIRMIEIMLP 181
>d1ozha1 c.31.1.3 (A:188-366) Catabolic acetolactate synthase
{Klebsiella pneumoniae [TaxId: 573]}
Length = 179
Score = 94.2 bits (233), Expect = 6e-23
Identities = 40/186 (21%), Positives = 73/186 (39%), Gaps = 11/186 (5%)
Query: 252 LPKEPDELALRQTLKLIVESKNPVLCVGGGCLNS--SEELRKFVGLTGIPVTCTTMGLGL 309
+ PD+ A+ Q KLI ++KNP+ +G S+ LR+ + + IPVT T G
Sbjct: 2 MGAAPDD-AIDQVAKLIAQAKNPIFLLGLMASQPENSKALRRLLETSHIPVTSTYQAAGA 60
Query: 310 FPCTDELCLRM-VGMFGTVYANYAVNECDLLLAAGVRFNERMTSKLEDFATRAKIVHIDI 368
+ VG+F + + DL++ G E + + A +VHID+
Sbjct: 61 VNQDNFSRFAGRVGLFNNQAGDRLLQLADLVICIGYSPVEYEPAMW--NSGNATLVHIDV 118
Query: 369 DSNEIGKVKLPDVSICADAKLVFNRMNMILESKGVGFMFDFSAWREELHEQKKKYPFSYK 428
+ PDV + D N++ ++ + S E+ ++
Sbjct: 119 LPAYEERNYTPDVELVGDIAGTLNKLAQNIDHRL-----VLSPQAAEILRDRQHQRELLD 173
Query: 429 TFGEEI 434
G ++
Sbjct: 174 RRGAQL 179
>d1zpda1 c.31.1.3 (A:188-362) Pyruvate decarboxylase {Zymomonas
mobilis [TaxId: 542]}
Length = 175
Score = 93.0 bits (230), Expect = 1e-22
Identities = 27/145 (18%), Positives = 49/145 (33%), Gaps = 3/145 (2%)
Query: 254 KEPDELALRQTLKLIVESKNPVLCVGGGCLNS--SEELRKFVGLTGIPVTCTTMGLGLFP 311
+ A+ +TLK I + VG + E KF G V FP
Sbjct: 5 EASLNAAVDETLKFIANRDKVAVLVGSKLRAAGAEEAAVKFTDALGGAVATMAAAKSFFP 64
Query: 312 CTDELCLRMVG-MFGTVYANYAVNECDLLLAAGVRFNERMTSKLEDFATRAKIVHIDIDS 370
+ L + + E D ++A FN+ T+ D K+V + S
Sbjct: 65 EENALYIGTSWGEVSYPGVEKTMKEADAVIALAPVFNDYSTTGWTDIPDPKKLVLAEPRS 124
Query: 371 NEIGKVKLPDVSICADAKLVFNRMN 395
+ ++ P V + + +++
Sbjct: 125 VVVNGIRFPSVHLKDYLTRLAQKVS 149
>d2ez9a3 c.36.1.9 (A:366-593) Pyruvate oxidase {Lactobacillus
plantarum [TaxId: 1590]}
Length = 228
Score = 94.6 bits (234), Expect = 2e-22
Identities = 39/193 (20%), Positives = 81/193 (41%), Gaps = 11/193 (5%)
Query: 434 IPPQYAIQILNELTDDEETIISTGVGQHQMWAIQFYMYKRARQLLTSSGFGSMGFGLPAA 493
+ ++ +N++ + + I S VG + A + + + +TS+ F +MG G+P A
Sbjct: 6 LQAYQVLRAVNKIAEPD-AIYSIDVGDINLNANRHLKLTPSNRHITSNLFATMGVGIPGA 64
Query: 494 MGAAVANPGAIVVDIDGDGSFIMNLQELAAIKAENIPVKILLINNQYLGMNVEYEDRYFE 553
+ A + P V ++ GDG M +Q+LA ++PV ++ N G + ++ +
Sbjct: 65 IAAKLNYPERQVFNLAGDGGASMTMQDLATQVQYHLPVINVVFTNCQYGWIKDEQEDTNQ 124
Query: 554 ANRANSFLGDPLRKSEIFPDMLKFAEACGIPAARVTKKKDVRAAIQ--LMLETPGPYLLD 611
+ D D K A+ + A RV K + + + + P L+D
Sbjct: 125 NDFIGVEFND--------IDFSKIADGVHMQAFRVNKIEQLPDVFEQAKAIAQHEPVLID 176
Query: 612 VMVSYQEHVVPMI 624
+++ +
Sbjct: 177 AVITGDRPLPAEK 189
Score = 34.1 bits (77), Expect = 0.035
Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 178 FQEIPVVEVTRYMTKHNYLVLDVDDIPRIIKEAFFIATSGRPGPVLIDIPVD 229
F +I ++ + + V ++ +P + ++A IA PVLID +
Sbjct: 132 FNDIDFSKIADGVHMQAFRVNKIEQLPDVFEQAKAIAQ---HEPVLIDAVIT 180
>d1q6za1 c.31.1.3 (A:182-341) Benzoylformate decarboxylase
{Pseudomonas putida [TaxId: 303]}
Length = 160
Score = 86.5 bits (213), Expect = 2e-20
Identities = 20/150 (13%), Positives = 47/150 (31%), Gaps = 4/150 (2%)
Query: 255 EPDELALRQTLKLIVESKNPVLCVGGGCLNS--SEELRKFVGLTGIPVTCTTMGLGLFPC 312
++ L +K + + NP + +G + + + PV
Sbjct: 3 RLNDQDLDILVKALNSASNPAIVLGPDVDAANANADCVMLAERLKAPVWVAPSAPRCPFP 62
Query: 313 TDELCLRMVGMFGTVYANYAVNECDLLLAAGVRFNERMTSKLEDF-ATRAKIVHIDIDSN 371
T C R + G + + D++L G + +++ + D
Sbjct: 63 TRHPCFRGLMPAGIAAISQLLEGHDVVLVIGAPVFRYHQYDPGQYLKPGTRLISVTCDPL 122
Query: 372 EIGKVKLPDVSICADAKLVFNRMNMILESK 401
E + +I AD + + + ++E
Sbjct: 123 EAARAP-MGDAIVADIGAMASALANLVEES 151
>d2djia1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus viridans
[TaxId: 1377]}
Length = 177
Score = 84.3 bits (207), Expect = 2e-19
Identities = 40/175 (22%), Positives = 65/175 (37%), Gaps = 7/175 (4%)
Query: 253 PKEPDELALRQTLKLIVESKNPVLCVGGGCLNSSEELRKFVGLTGIPVTCTTMGLGLFPC 312
P P + ++L+ SK PV+ G G + +++ PV T F
Sbjct: 3 PIAPAAQDIDAAVELLNNSKRPVIYAGIGTMGHGPAVQELARKIKAPVITTGKNFETFEW 62
Query: 313 TDELCLRMVGMFGTVYANYAVNECDLLLAAGVRFNERMTSKLEDFATRAKIVHIDIDSNE 372
E G AN + E D +L AG F F + IDID
Sbjct: 63 DFEALTGSTYRVGWKPANETILEADTVLFAGSNFPFSEVEG--TFRNVDNFIQIDIDPAM 120
Query: 373 IGKVKLPDVSICADAKLVFNRMNMILESKG-----VGFMFDFSAWREELHEQKKK 422
+GK DV+I DA L + + +++ + + + WRE ++ + K
Sbjct: 121 LGKRHHADVAILGDAALAIDEILNKVDAVEESAWWTANLKNIANWREYINMLETK 175
>d2ez9a1 c.31.1.3 (A:183-365) Pyruvate oxidase {Lactobacillus
plantarum [TaxId: 1590]}
Length = 183
Score = 81.6 bits (200), Expect = 2e-18
Identities = 35/174 (20%), Positives = 69/174 (39%), Gaps = 8/174 (4%)
Query: 250 SSLPKEPDELALRQTLKLIVESKNPVLCVGGGCLNSSEELRKFVGLTGIPVTCTTMGLGL 309
+ L EPD A+ + + ++ ++ P++ G G + +EL + IP+ T G+
Sbjct: 9 TPLLPEPDVQAVTRLTQTLLAAERPLIYYGIGARKAGKELEQLSKTLKIPLMSTYPAKGI 68
Query: 310 FPCTDELCLRMVGMFGTVYANYAVNECDLLLAAGVRFNERMTSKLEDFATRAKIVHIDID 369
L AN A+ + D++L G + SK + IDID
Sbjct: 69 VADRYPAYLGSANRVAQKPANEALAQADVVLFVGNNYPFAEVSKAFKNTRY--FLQIDID 126
Query: 370 SNEIGKVKLPDVSICADAKLVFNRMNMILESKGVGFMFDFSAWREELHEQKKKY 423
++GK D+++ ADA+ + + + + + W + K +
Sbjct: 127 PAKLGKRHKTDIAVLADAQKTLAAILAQVSER------ESTPWWQANLANVKNW 174
>d2ji7a1 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxalobacter
formigenes [TaxId: 847]}
Length = 175
Score = 75.0 bits (183), Expect = 2e-16
Identities = 40/172 (23%), Positives = 62/172 (36%), Gaps = 15/172 (8%)
Query: 256 PDELALRQTLKLIVESKNPVLCVGGGCLNSS--EELRKFVGLTGIPVTCTTMGLGLFPCT 313
P E A+ + LI +K PV+ +G G + +E+R V TGIP M GL P
Sbjct: 4 PAEDAIARAADLIKNAKRPVIMLGKGAAYAQCDDEIRALVEETGIPFLPMGMAKGLLPDN 63
Query: 314 DELCLRMVGMFGTVYANYAVNECDLLLAAGVRFNERMTSKLEDF--ATRAKIVHIDIDSN 371
+A+ +CD+ + G R N M K V IDI +N
Sbjct: 64 HP-------QSAAATRAFALAQCDVCVLIGARLNWLMQHGKGKTWGDELKKYVQIDIQAN 116
Query: 372 EIGKVKLPDVSICADAKLVFNRMNMILESKGVGFMFDFSAWREELHEQKKKY 423
E+ + + D K + + L+ + W L +
Sbjct: 117 EMDSNQPIAAPVVGDIKSAVSLLRKALKGAP----KADAEWTGALKAKVDGN 164
>d2arza1 b.45.1.1 (A:2-239) Hypothetical protein PA4388 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 238
Score = 29.3 bits (65), Expect = 1.2
Identities = 15/105 (14%), Positives = 32/105 (30%), Gaps = 8/105 (7%)
Query: 472 KRARQLLTSSGFGSMGFGLPAAMGAAVANPGAIVVDIDGDGSFIMNLQELAAIKAENIPV 531
K AR+LL + G + + D +G ++ + +A N
Sbjct: 6 KNARELLLKEYRAVLSTHSKKWPGFPFGSVVPYCL--DAEGRPLILISRIAQ-HTHN--- 59
Query: 532 KILLINNQYLGMNVEYEDRYFEANRANSFLGDPLRKSEIFPDMLK 576
L + + + E +A + L + + +E
Sbjct: 60 --LQADPRCSMLVGERGAEDIQAVGRLTLLAEARQLAEEEVAAAA 102
>d1kq1a_ b.38.1.2 (A:) Pleiotropic translational regulator Hfq
{Staphylococcus aureus [TaxId: 1280]}
Length = 60
Score = 26.5 bits (59), Expect = 1.8
Identities = 7/23 (30%), Positives = 11/23 (47%), Gaps = 2/23 (8%)
Query: 517 NLQE--LAAIKAENIPVKILLIN 537
N+Q+ L KA V + +N
Sbjct: 1 NIQDKALENFKANQTEVTVFFLN 23
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal
domain {Penicillium sp. [TaxId: 5081]}
Length = 354
Score = 29.0 bits (64), Expect = 1.9
Identities = 19/174 (10%), Positives = 36/174 (20%), Gaps = 12/174 (6%)
Query: 390 VFNRMNMILESKGVGFMFDFSAWREELHEQKKKYPFSYKTFGEEIPPQYAIQILNELTDD 449
R++ IL + ++ + + K + P Q NE +
Sbjct: 111 WLQRVDGILRTSDEAYLKATDNYASNIAATIAKAQIT------NGGPIILYQPENEYSGA 164
Query: 450 EETIISTGVGQHQMWAIQFYMYKRARQLLTSSGFGSMGFGLPAAMGAAV------ANPGA 503
G + + S+ + G P AV + P
Sbjct: 165 CCGYNGFPDGSYMQYIEDHARDAGIVVPFISNDAWAAGHNAPGTGAGAVDIYGHDSYPLG 224
Query: 504 IVVDIDGDGSFIMNLQELAAIKAENIPVKILLINNQYLGMNVEYEDRYFEANRA 557
+ P + G + F A
Sbjct: 225 FDCANPSTWPSGNLPTYFHTSHEQQSPSTPYSLVEFQGGAFDPWGGVGFAKCAA 278
>d1yrra2 c.1.9.10 (A:54-350) N-acetylglucosamine-6-phosphate
deacetylase, NagA, catalytic domain {Escherichia coli
[TaxId: 562]}
Length = 297
Score = 28.7 bits (62), Expect = 2.2
Identities = 8/48 (16%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Query: 72 GADIIVEALERQGVTTVFAYPGGASIEIHQSLTRSNIRSILPRHEQGG 119
+I+ +A E+ G T S E+ + +R + +
Sbjct: 26 TLEIMQKANEKSGCTNYLPTLITTSDEL----MKQGVRVMREYLAKHP 69
>d1u1sa1 b.38.1.2 (A:6-71) Pleiotropic translational regulator Hfq
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 66
Score = 25.7 bits (57), Expect = 3.1
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 517 NLQE--LAAIKAENIPVKILLINNQYLGMNVEYEDRY 551
+LQ+ L ++ E +PV I L+N L +E D++
Sbjct: 1 SLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQF 37
>d1smyc_ e.29.1.1 (C:) RNA-polymerase beta {Thermus thermophilus
[TaxId: 274]}
Length = 1119
Score = 27.8 bits (61), Expect = 5.1
Identities = 11/47 (23%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Query: 335 ECDLLLAAGVRFN--ERMTSKLEDFATRAKIVHIDIDSNEIGKVKLP 379
E L A G E +T K +D R I ++ + +P
Sbjct: 1036 EVWALEAYGAAHTLQEMLTLKSDDIEGRNAAYEAIIKGEDVPEPSVP 1082
>d1hqia_ d.137.1.1 (A:) Phenol hydroxylase P2 protein {Pseudomonas
sp., CF600 [TaxId: 306]}
Length = 90
Score = 25.8 bits (57), Expect = 5.3
Identities = 12/59 (20%), Positives = 25/59 (42%), Gaps = 6/59 (10%)
Query: 500 NPGAIVVD------IDGDGSFIMNLQELAAIKAENIPVKILLINNQYLGMNVEYEDRYF 552
NP A+V I+ + + + + V+ +L++ +G NV+ +D F
Sbjct: 26 NPHAVVQHHPAMIRIEAEKRLEIRRETVEENLGRAWDVQEMLVDVITIGGNVDEDDDRF 84
>d1tyea_ b.69.8.1 (A:) Integrin alpha N-terminal domain {Human (Homo
sapiens), isoform IIb [TaxId: 9606]}
Length = 452
Score = 27.2 bits (59), Expect = 6.2
Identities = 17/146 (11%), Positives = 35/146 (23%), Gaps = 17/146 (11%)
Query: 367 DIDSNEIGKVKLPDVSICADAKLVFNRMNMILESKGVGFMFDFSAWREELHEQKKKYPFS 426
+ + P ++ + ++ S+ +Y
Sbjct: 174 VVTQAGELVLGAPGGYYFLGLLAQAPVADIFSSYRPGILLWHVSSQSLSFDSSNPEYFDG 233
Query: 427 YKTFGEEIPPQYAIQILNELTDDEETIISTGVGQHQMWAIQFYMYKRARQLLTSSGFGSM 486
Y +G Y++ + D T G + Q L M
Sbjct: 234 Y--WG------YSVAVGEFDGDLNTTEYVVGAPTWSWTLGAVEILDSYYQRLHRLRAEQM 285
Query: 487 GFGLPAAMGAAVANPGAIVVDIDGDG 512
++ V D++GDG
Sbjct: 286 ASYFGHSVA---------VTDVNGDG 302
>d1ckva_ d.137.1.1 (A:) Soluble methane monooxygenase regulatory
protein B {Escherichia coli [TaxId: 562]}
Length = 141
Score = 26.4 bits (58), Expect = 6.6
Identities = 9/44 (20%), Positives = 17/44 (38%), Gaps = 6/44 (13%)
Query: 500 NPGAIVVD------IDGDGSFIMNLQELAAIKAENIPVKILLIN 537
NP V D I +G ++ E++ + V L++
Sbjct: 65 NPTVNVEDRAGYWWIKANGKIEVDCDEISELLGRQFNVYDFLVD 108
>d1nxja_ c.8.7.1 (A:) Hypothetical protein Rv3853 {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 156
Score = 26.0 bits (57), Expect = 9.8
Identities = 10/47 (21%), Positives = 15/47 (31%), Gaps = 1/47 (2%)
Query: 465 AIQFYMYKRARQLLTSSGFGSMGFGLPAAMGAAVANPGAIVV-DIDG 510
I + S+ G+ + +G PG I D DG
Sbjct: 106 GIDIGIKALGTNPRKSTKTGAGERDVEITLGGVTFVPGDIAYSDDDG 152
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.137 0.405
Gapped
Lambda K H
0.267 0.0456 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,436,634
Number of extensions: 121547
Number of successful extensions: 456
Number of sequences better than 10.0: 1
Number of HSP's gapped: 405
Number of HSP's successfully gapped: 53
Length of query: 643
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 552
Effective length of database: 1,158,166
Effective search space: 639307632
Effective search space used: 639307632
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.0 bits)