Query 040734
Match_columns 361
No_of_seqs 173 out of 1185
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 18:11:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040734.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040734hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pz0_A Glycerophosphoryl diest 100.0 1.7E-54 5.9E-59 400.1 25.4 244 42-338 7-251 (252)
2 3qvq_A Phosphodiesterase OLEI0 100.0 1.1E-53 3.6E-58 394.8 28.6 245 42-339 5-251 (252)
3 2otd_A Glycerophosphodiester p 100.0 5.4E-53 1.9E-57 388.9 23.8 237 45-335 5-244 (247)
4 3ks6_A Glycerophosphoryl diest 100.0 6.3E-53 2.2E-57 389.1 24.0 242 46-339 2-245 (250)
5 2oog_A Glycerophosphoryl diest 100.0 9.7E-52 3.3E-56 388.7 27.0 252 44-337 21-280 (287)
6 3l12_A Putative glycerophospho 100.0 3.7E-51 1.3E-55 389.2 29.2 264 46-339 17-309 (313)
7 2o55_A Putative glycerophospho 100.0 3E-51 1E-55 379.7 25.2 237 45-337 5-255 (258)
8 3ch0_A Glycerophosphodiester p 100.0 7E-51 2.4E-55 379.9 22.4 248 45-332 7-270 (272)
9 1zcc_A Glycerophosphodiester p 100.0 2.7E-52 9.2E-57 384.5 11.7 234 47-341 2-238 (248)
10 3no3_A Glycerophosphodiester p 100.0 3.9E-50 1.3E-54 367.8 25.1 233 45-339 3-237 (238)
11 3mz2_A Glycerophosphoryl diest 100.0 1.6E-48 5.6E-53 366.8 26.8 241 42-343 27-283 (292)
12 1o1z_A GDPD, glycerophosphodie 100.0 2.7E-49 9.2E-54 361.4 19.7 218 45-334 11-233 (234)
13 1ydy_A Glycerophosphoryl diest 100.0 7.8E-49 2.7E-53 379.5 23.0 270 30-335 18-355 (356)
14 1vd6_A Glycerophosphoryl diest 100.0 3.5E-48 1.2E-52 351.8 22.7 215 45-334 6-222 (224)
15 3i10_A Putative glycerophospho 100.0 5.9E-45 2E-49 339.6 21.2 245 43-339 14-275 (278)
16 1xx1_A Smase I, sphingomyelina 100.0 4E-38 1.4E-42 295.5 13.6 227 45-339 4-265 (285)
17 3rlg_A Sphingomyelin phosphodi 99.9 1.2E-21 4E-26 180.4 19.1 216 72-337 36-280 (302)
18 1djx_A PLC-D1, phosphoinositid 96.1 0.003 1E-07 64.7 4.0 41 69-109 188-228 (624)
19 2zkm_X 1-phosphatidylinositol- 95.8 0.0054 1.8E-07 64.5 4.2 41 69-109 336-378 (799)
20 3qr0_A Phospholipase C-beta (P 95.6 0.0066 2.2E-07 63.8 3.8 41 69-109 347-387 (816)
21 3ohm_B 1-phosphatidylinositol- 94.9 0.014 4.6E-07 61.9 3.6 40 70-109 341-382 (885)
22 3f4w_A Putative hexulose 6 pho 89.9 0.95 3.3E-05 38.9 7.9 94 223-326 38-134 (211)
23 3h4x_A Phosphatidylinositol-sp 89.2 0.81 2.8E-05 42.4 7.0 37 75-111 45-82 (339)
24 4e38_A Keto-hydroxyglutarate-a 89.1 3.4 0.00012 36.5 10.8 96 226-341 73-171 (232)
25 3a24_A Alpha-galactosidase; gl 88.3 1.1 3.6E-05 45.7 7.8 72 258-330 309-398 (641)
26 2d73_A Alpha-glucosidase SUSB; 87.2 2.1 7.1E-05 44.1 9.2 70 259-328 372-471 (738)
27 1pii_A N-(5'phosphoribosyl)ant 87.2 23 0.00078 34.4 17.4 136 168-328 38-186 (452)
28 3qja_A IGPS, indole-3-glycerol 87.1 17 0.00057 32.7 14.9 141 167-327 41-190 (272)
29 3kts_A Glycerol uptake operon 85.5 14 0.00049 31.4 12.3 143 162-331 36-184 (192)
30 3q58_A N-acetylmannosamine-6-p 85.3 18 0.00063 31.5 15.0 143 169-325 7-155 (229)
31 3nav_A Tryptophan synthase alp 84.6 7.3 0.00025 35.1 10.7 107 226-338 85-203 (271)
32 3lab_A Putative KDPG (2-keto-3 84.6 7.4 0.00025 33.9 10.3 97 226-342 52-157 (217)
33 2p10_A MLL9387 protein; putati 84.0 3.3 0.00011 37.6 7.9 96 223-328 76-192 (286)
34 2rbg_A Putative uncharacterize 83.8 2.3 7.8E-05 33.0 5.7 64 261-325 22-92 (126)
35 3tsm_A IGPS, indole-3-glycerol 83.0 26 0.00089 31.5 16.5 141 166-326 43-196 (272)
36 3vnd_A TSA, tryptophan synthas 82.8 6.4 0.00022 35.4 9.5 108 226-338 83-201 (267)
37 3usb_A Inosine-5'-monophosphat 82.6 9.8 0.00034 37.6 11.6 100 216-328 269-390 (511)
38 1vhc_A Putative KHG/KDPG aldol 81.7 13 0.00046 32.3 10.9 97 226-342 56-155 (224)
39 3igs_A N-acetylmannosamine-6-p 81.0 28 0.00094 30.4 14.5 143 169-325 7-155 (232)
40 1vkf_A Glycerol uptake operon 79.7 19 0.00063 30.6 10.7 138 164-331 40-182 (188)
41 1mxs_A KDPG aldolase; 2-keto-3 79.7 20 0.0007 31.2 11.4 96 227-342 66-164 (225)
42 3jr2_A Hexulose-6-phosphate sy 78.8 7.8 0.00027 33.4 8.4 92 223-325 44-138 (218)
43 3gr7_A NADPH dehydrogenase; fl 78.0 43 0.0015 31.0 13.8 112 226-339 198-325 (340)
44 1wbh_A KHG/KDPG aldolase; lyas 75.9 20 0.00069 30.9 10.2 96 226-341 55-153 (214)
45 3kts_A Glycerol uptake operon 75.6 15 0.00052 31.3 9.0 52 285-337 43-100 (192)
46 2gjl_A Hypothetical protein PA 75.1 22 0.00075 32.6 10.9 62 260-327 85-146 (328)
47 2fli_A Ribulose-phosphate 3-ep 74.9 14 0.00047 31.5 8.9 79 259-338 17-108 (220)
48 4fxs_A Inosine-5'-monophosphat 73.9 11 0.00037 37.1 8.8 100 216-328 244-365 (496)
49 2isw_A Putative fructose-1,6-b 73.5 28 0.00097 32.1 10.9 137 166-323 3-170 (323)
50 3bw2_A 2-nitropropane dioxygen 70.3 15 0.00052 34.3 8.7 63 260-327 111-173 (369)
51 3hgj_A Chromate reductase; TIM 70.1 69 0.0023 29.6 14.0 113 226-339 206-336 (349)
52 1yxy_A Putative N-acetylmannos 69.1 54 0.0018 28.1 11.5 41 286-327 176-216 (234)
53 3ajx_A 3-hexulose-6-phosphate 68.1 24 0.00083 29.6 8.8 90 224-323 39-131 (207)
54 1vkf_A Glycerol uptake operon 68.0 15 0.00052 31.2 7.2 51 285-337 45-101 (188)
55 3tha_A Tryptophan synthase alp 67.0 8.5 0.00029 34.3 5.7 80 259-338 104-194 (252)
56 1uas_A Alpha-galactosidase; TI 66.9 18 0.00061 33.8 8.3 43 286-328 77-132 (362)
57 3bo9_A Putative nitroalkan dio 66.5 17 0.00058 33.5 7.9 62 260-327 91-152 (326)
58 3ctl_A D-allulose-6-phosphate 66.3 17 0.00058 31.8 7.5 80 259-339 14-106 (231)
59 3b0p_A TRNA-dihydrouridine syn 66.2 55 0.0019 30.3 11.5 66 262-329 148-228 (350)
60 3igs_A N-acetylmannosamine-6-p 66.0 27 0.00092 30.5 8.8 41 285-326 170-210 (232)
61 1vrd_A Inosine-5'-monophosphat 65.9 25 0.00085 34.3 9.5 92 225-329 265-372 (494)
62 1rpx_A Protein (ribulose-phosp 65.5 27 0.00092 30.0 8.7 65 259-324 24-96 (230)
63 3inp_A D-ribulose-phosphate 3- 65.4 24 0.00082 31.2 8.4 69 223-302 71-140 (246)
64 1f76_A Dihydroorotate dehydrog 64.8 42 0.0014 30.7 10.4 97 227-330 192-322 (336)
65 3q58_A N-acetylmannosamine-6-p 64.7 28 0.00097 30.3 8.7 41 285-326 170-210 (229)
66 1z41_A YQJM, probable NADH-dep 64.5 71 0.0024 29.3 11.9 112 226-339 198-325 (338)
67 3vk5_A MOEO5; TIM barrel, tran 64.5 36 0.0012 30.8 9.3 70 268-338 196-275 (286)
68 1i4n_A Indole-3-glycerol phosp 64.3 15 0.0005 32.8 6.7 140 168-329 30-181 (251)
69 2z6i_A Trans-2-enoyl-ACP reduc 64.1 17 0.00057 33.6 7.4 62 260-327 77-138 (332)
70 1wv2_A Thiazole moeity, thiazo 63.7 8.8 0.0003 34.4 5.1 126 166-327 83-217 (265)
71 2c6q_A GMP reductase 2; TIM ba 62.7 83 0.0028 29.2 12.0 91 227-330 150-256 (351)
72 4avf_A Inosine-5'-monophosphat 62.4 20 0.00069 35.1 8.0 89 227-328 259-363 (490)
73 4fo4_A Inosine 5'-monophosphat 61.4 26 0.00089 32.9 8.3 89 227-328 138-242 (366)
74 3fwz_A Inner membrane protein 61.2 56 0.0019 25.4 10.1 119 201-338 17-137 (140)
75 2yw3_A 4-hydroxy-2-oxoglutarat 61.2 46 0.0016 28.3 9.3 61 262-330 74-134 (207)
76 3n9r_A Fructose-bisphosphate a 60.0 1E+02 0.0035 28.1 12.1 112 201-324 28-173 (307)
77 3vzx_A Heptaprenylglyceryl pho 59.7 86 0.0029 27.3 10.8 75 261-337 140-224 (228)
78 1rvg_A Fructose-1,6-bisphospha 59.3 99 0.0034 28.2 11.5 110 201-324 28-171 (305)
79 2nli_A Lactate oxidase; flavoe 59.2 61 0.0021 30.3 10.4 96 223-332 215-319 (368)
80 7odc_A Protein (ornithine deca 59.0 1.1E+02 0.0038 29.0 12.5 102 217-336 38-144 (424)
81 1qwg_A PSL synthase;, (2R)-pho 58.7 55 0.0019 29.0 9.3 69 259-328 86-170 (251)
82 1y0e_A Putative N-acetylmannos 56.6 89 0.0031 26.3 10.8 40 287-327 165-205 (223)
83 1h5y_A HISF; histidine biosynt 56.6 26 0.00089 30.1 7.0 77 262-339 37-124 (253)
84 3o63_A Probable thiamine-phosp 56.0 32 0.0011 30.2 7.5 57 265-326 106-162 (243)
85 3a5v_A Alpha-galactosidase; be 56.0 32 0.0011 32.6 8.0 42 286-328 77-131 (397)
86 1eep_A Inosine 5'-monophosphat 55.8 36 0.0012 32.2 8.3 91 226-329 182-288 (404)
87 3tdn_A FLR symmetric alpha-bet 55.7 56 0.0019 28.3 9.1 78 260-338 37-125 (247)
88 3sgz_A Hydroxyacid oxidase 2; 55.3 1E+02 0.0036 28.6 11.2 95 223-331 203-306 (352)
89 1ep3_A Dihydroorotate dehydrog 55.1 1.1E+02 0.0036 27.4 11.2 40 287-327 231-271 (311)
90 3zwt_A Dihydroorotate dehydrog 55.1 95 0.0033 29.0 11.0 77 260-337 236-344 (367)
91 1vhn_A Putative flavin oxidore 54.1 46 0.0016 30.3 8.5 103 226-336 115-228 (318)
92 3eul_A Possible nitrate/nitrit 53.5 73 0.0025 24.4 11.1 78 260-338 50-132 (152)
93 3ovp_A Ribulose-phosphate 3-ep 53.5 24 0.00083 30.7 6.2 69 223-302 48-118 (228)
94 1tqj_A Ribulose-phosphate 3-ep 53.2 35 0.0012 29.6 7.2 80 259-338 18-111 (230)
95 1ccw_A Protein (glutamate muta 53.1 67 0.0023 25.2 8.4 68 260-327 43-120 (137)
96 1h1y_A D-ribulose-5-phosphate 52.4 36 0.0012 29.2 7.2 119 166-325 18-144 (228)
97 1ypf_A GMP reductase; GUAC, pu 51.6 94 0.0032 28.5 10.3 92 226-330 137-243 (336)
98 3inp_A D-ribulose-phosphate 3- 51.5 61 0.0021 28.6 8.5 82 258-339 40-134 (246)
99 1y0e_A Putative N-acetylmannos 51.1 64 0.0022 27.3 8.6 114 204-326 26-146 (223)
100 3ffs_A Inosine-5-monophosphate 51.1 36 0.0012 32.4 7.4 62 262-325 147-211 (400)
101 2oo0_A ODC, ornithine decarbox 50.7 1.5E+02 0.005 28.6 11.9 90 229-336 62-154 (471)
102 1vzw_A Phosphoribosyl isomeras 50.6 84 0.0029 26.9 9.4 52 287-339 65-122 (244)
103 1tqj_A Ribulose-phosphate 3-ep 50.4 9.4 0.00032 33.3 3.0 31 69-102 14-44 (230)
104 2y88_A Phosphoribosyl isomeras 50.4 95 0.0032 26.5 9.7 76 262-339 35-121 (244)
105 2ekc_A AQ_1548, tryptophan syn 50.2 66 0.0022 28.4 8.7 72 226-302 82-153 (262)
106 2htm_A Thiazole biosynthesis p 50.0 33 0.0011 30.7 6.5 127 165-327 72-208 (268)
107 3qja_A IGPS, indole-3-glycerol 50.0 1.1E+02 0.0037 27.3 10.1 72 267-339 178-262 (272)
108 4af0_A Inosine-5'-monophosphat 49.7 91 0.0031 30.9 10.1 89 226-327 310-414 (556)
109 1jub_A Dihydroorotate dehydrog 49.0 57 0.0019 29.4 8.2 49 287-336 230-287 (311)
110 1wa3_A 2-keto-3-deoxy-6-phosph 48.9 87 0.003 26.0 9.0 76 263-341 27-106 (205)
111 3kru_A NADH:flavin oxidoreduct 48.9 1.6E+02 0.0054 27.1 11.4 102 226-332 197-313 (343)
112 3gt7_A Sensor protein; structu 48.6 91 0.0031 24.0 13.0 107 217-337 8-123 (154)
113 3sz8_A 2-dehydro-3-deoxyphosph 48.4 1.5E+02 0.0053 26.6 11.8 121 179-325 91-240 (285)
114 2p9j_A Hypothetical protein AQ 48.3 55 0.0019 25.7 7.3 52 287-339 43-97 (162)
115 1yad_A Regulatory protein TENI 48.2 36 0.0012 28.9 6.4 57 265-327 82-138 (221)
116 1jcn_A Inosine monophosphate d 48.0 81 0.0028 30.7 9.7 91 226-329 284-390 (514)
117 3e8m_A Acylneuraminate cytidyl 48.0 42 0.0014 26.5 6.5 52 287-339 38-92 (164)
118 2v82_A 2-dehydro-3-deoxy-6-pho 47.9 65 0.0022 27.1 8.0 56 263-325 72-127 (212)
119 1wa3_A 2-keto-3-deoxy-6-phosph 47.5 1.2E+02 0.0041 25.1 14.0 105 203-327 24-132 (205)
120 1gox_A (S)-2-hydroxy-acid oxid 47.5 1.2E+02 0.004 28.3 10.3 95 223-331 211-314 (370)
121 3o27_A Putative uncharacterize 47.4 18 0.00063 25.1 3.4 46 49-104 13-59 (68)
122 2zay_A Response regulator rece 47.3 90 0.0031 23.6 9.9 49 287-336 69-123 (147)
123 2nva_A Arginine decarboxylase, 47.3 1.3E+02 0.0044 27.7 10.7 90 229-336 31-123 (372)
124 4a29_A Engineered retro-aldol 46.7 63 0.0021 28.8 7.7 143 163-326 27-180 (258)
125 3kht_A Response regulator; PSI 46.4 92 0.0031 23.5 11.2 75 261-336 41-123 (144)
126 2e6f_A Dihydroorotate dehydrog 46.2 62 0.0021 29.2 8.0 49 287-336 233-289 (314)
127 2xn2_A Alpha-galactosidase; hy 46.1 62 0.0021 33.3 8.8 46 257-302 349-415 (732)
128 3eod_A Protein HNR; response r 45.9 87 0.003 23.0 11.3 79 261-340 41-125 (130)
129 2nzl_A Hydroxyacid oxidase 1; 45.8 1.1E+02 0.0037 28.9 9.8 95 224-332 239-342 (392)
130 3glc_A Aldolase LSRF; TIM barr 45.8 56 0.0019 29.6 7.5 71 265-336 132-220 (295)
131 1kbi_A Cytochrome B2, L-LCR; f 45.4 1.3E+02 0.0043 29.5 10.6 95 223-331 329-437 (511)
132 1p0k_A Isopentenyl-diphosphate 45.3 1.5E+02 0.0052 27.1 10.7 45 286-331 239-285 (349)
133 3llv_A Exopolyphosphatase-rela 45.3 1E+02 0.0034 23.6 8.4 124 201-342 16-139 (141)
134 3lua_A Response regulator rece 45.3 94 0.0032 23.3 9.5 78 261-339 39-125 (140)
135 3ovp_A Ribulose-phosphate 3-ep 45.2 92 0.0031 26.9 8.6 82 258-339 17-112 (228)
136 3ij5_A 3-deoxy-D-manno-octulos 45.1 47 0.0016 28.2 6.7 51 288-339 84-137 (211)
137 1wv2_A Thiazole moeity, thiazo 45.1 29 0.001 31.0 5.3 36 288-325 127-162 (265)
138 3r2g_A Inosine 5'-monophosphat 44.7 1.5E+02 0.0052 27.6 10.5 90 226-328 129-230 (361)
139 3n1u_A Hydrolase, HAD superfam 43.9 65 0.0022 26.5 7.3 51 289-340 55-108 (191)
140 1h1y_A D-ribulose-5-phosphate 43.9 87 0.003 26.8 8.3 77 259-338 20-112 (228)
141 1mzh_A Deoxyribose-phosphate a 43.8 1.5E+02 0.0052 25.3 13.0 76 260-336 134-214 (225)
142 2qr3_A Two-component system re 43.8 98 0.0033 23.0 11.7 78 260-339 36-124 (140)
143 3l5l_A Xenobiotic reductase A; 43.6 88 0.003 29.1 8.8 111 226-339 212-343 (363)
144 3n07_A 3-deoxy-D-manno-octulos 43.4 1E+02 0.0035 25.6 8.5 52 288-340 60-114 (195)
145 1rpx_A Protein (ribulose-phosp 43.3 12 0.00041 32.3 2.5 28 70-100 21-48 (230)
146 3khj_A Inosine-5-monophosphate 42.8 82 0.0028 29.3 8.4 61 262-325 108-172 (361)
147 3mmz_A Putative HAD family hyd 42.7 50 0.0017 26.8 6.3 50 288-339 47-99 (176)
148 1jcn_A Inosine monophosphate d 42.6 70 0.0024 31.2 8.3 63 261-325 257-323 (514)
149 3i65_A Dihydroorotate dehydrog 42.4 1.4E+02 0.0049 28.4 10.1 67 260-327 285-375 (415)
150 3r2g_A Inosine 5'-monophosphat 42.3 82 0.0028 29.4 8.3 63 261-325 102-168 (361)
151 1qop_A Tryptophan synthase alp 42.0 1.2E+02 0.004 26.8 9.0 72 226-302 82-153 (268)
152 2w6r_A Imidazole glycerol phos 41.6 56 0.0019 28.5 6.8 66 261-327 33-104 (266)
153 1p4c_A L(+)-mandelate dehydrog 41.6 1.3E+02 0.0045 28.1 9.7 94 223-330 211-311 (380)
154 3m47_A Orotidine 5'-phosphate 41.3 1.6E+02 0.0054 25.3 9.5 110 223-339 50-172 (228)
155 3mn1_A Probable YRBI family ph 41.1 61 0.0021 26.6 6.6 51 288-339 54-107 (189)
156 3ctl_A D-allulose-6-phosphate 40.5 43 0.0015 29.2 5.7 87 223-324 43-133 (231)
157 1geq_A Tryptophan synthase alp 40.3 81 0.0028 27.1 7.6 82 226-313 69-150 (248)
158 3a21_A Putative secreted alpha 39.5 80 0.0027 31.6 8.3 43 286-329 80-145 (614)
159 1k1e_A Deoxy-D-mannose-octulos 39.5 72 0.0025 25.8 6.8 53 286-339 41-96 (180)
160 1ka9_F Imidazole glycerol phos 39.2 96 0.0033 26.6 7.9 65 261-326 155-225 (252)
161 3ffs_A Inosine-5-monophosphate 39.2 91 0.0031 29.6 8.1 34 293-327 243-276 (400)
162 2r8e_A 3-deoxy-D-manno-octulos 39.0 79 0.0027 25.8 7.0 51 288-339 61-114 (188)
163 1szn_A Alpha-galactosidase; (b 39.0 84 0.0029 29.9 8.0 41 286-328 80-134 (417)
164 1ka9_F Imidazole glycerol phos 38.6 90 0.0031 26.8 7.6 51 287-338 65-121 (252)
165 4e7p_A Response regulator; DNA 38.2 1.3E+02 0.0044 22.8 14.4 113 218-340 22-139 (150)
166 1ep3_A Dihydroorotate dehydrog 38.2 1.2E+02 0.0041 26.9 8.7 40 286-325 153-195 (311)
167 2yxx_A Diaminopimelate decarbo 37.8 2.4E+02 0.0083 25.9 11.7 91 228-336 26-121 (386)
168 2o0t_A Diaminopimelate decarbo 37.5 1.8E+02 0.0063 27.8 10.3 89 230-336 57-149 (467)
169 2obb_A Hypothetical protein; s 37.3 46 0.0016 26.7 4.9 43 286-329 30-77 (142)
170 1zfj_A Inosine monophosphate d 37.0 2.9E+02 0.0098 26.4 11.8 92 226-330 262-369 (491)
171 1qo2_A Molecule: N-((5-phospho 37.0 69 0.0024 27.5 6.5 52 285-338 62-118 (241)
172 2plj_A Lysine/ornithine decarb 36.7 1.5E+02 0.0052 27.9 9.4 47 286-333 109-158 (419)
173 3vnd_A TSA, tryptophan synthas 36.5 17 0.00058 32.6 2.4 41 286-327 195-236 (267)
174 4fo4_A Inosine 5'-monophosphat 36.3 72 0.0025 29.9 6.8 61 262-325 111-176 (366)
175 2czd_A Orotidine 5'-phosphate 36.0 55 0.0019 27.6 5.6 105 222-337 36-152 (208)
176 1vzw_A Phosphoribosyl isomeras 36.0 1E+02 0.0035 26.4 7.5 67 260-327 148-223 (244)
177 2yxb_A Coenzyme B12-dependent 35.5 1.7E+02 0.0059 23.5 9.8 76 260-337 58-141 (161)
178 1xi3_A Thiamine phosphate pyro 35.5 92 0.0032 25.9 7.0 55 266-326 81-135 (215)
179 3iwp_A Copper homeostasis prot 35.4 2.5E+02 0.0085 25.3 10.0 110 214-327 58-187 (287)
180 3hzh_A Chemotaxis response reg 35.4 1.5E+02 0.0052 22.8 12.5 50 287-337 100-153 (157)
181 2qxy_A Response regulator; reg 35.4 1.4E+02 0.0047 22.3 10.7 77 260-338 37-118 (142)
182 3snk_A Response regulator CHEY 35.2 87 0.003 23.3 6.3 51 287-338 76-130 (135)
183 3khj_A Inosine-5-monophosphate 34.9 1.8E+02 0.006 27.0 9.3 35 292-327 203-237 (361)
184 3hdg_A Uncharacterized protein 34.6 1.4E+02 0.0047 22.1 12.6 78 260-338 40-122 (137)
185 1qop_A Tryptophan synthase alp 34.6 12 0.00042 33.4 1.2 41 286-327 194-235 (268)
186 4fnq_A Alpha-galactosidase AGA 34.5 1.4E+02 0.0047 30.7 9.2 62 239-302 329-411 (729)
187 3nhm_A Response regulator; pro 34.3 1.4E+02 0.0047 21.9 10.4 105 218-337 6-118 (133)
188 3sgz_A Hydroxyacid oxidase 2; 34.1 2.1E+02 0.0073 26.5 9.6 39 285-325 205-244 (352)
189 3cg0_A Response regulator rece 34.0 1.4E+02 0.0048 22.0 8.7 50 287-337 72-124 (140)
190 1yxy_A Putative N-acetylmannos 33.9 2.1E+02 0.0073 24.1 15.0 144 169-323 7-157 (234)
191 1thf_D HISF protein; thermophI 33.8 1.3E+02 0.0045 25.7 7.9 78 260-338 153-244 (253)
192 2pgw_A Muconate cycloisomerase 33.8 2.5E+02 0.0086 25.9 10.4 41 287-327 231-272 (384)
193 3grc_A Sensor protein, kinase; 33.8 1.4E+02 0.005 22.1 8.5 76 260-337 39-123 (140)
194 1eep_A Inosine 5'-monophosphat 33.1 93 0.0032 29.2 7.2 60 264-325 158-221 (404)
195 2w6r_A Imidazole glycerol phos 32.7 1.6E+02 0.0053 25.5 8.3 67 260-327 158-230 (266)
196 1tv5_A Dhodehase, dihydroorota 32.7 1.2E+02 0.004 29.2 7.8 68 260-328 313-404 (443)
197 3cg4_A Response regulator rece 32.4 1.5E+02 0.0051 22.0 7.3 75 260-336 40-122 (142)
198 1q6o_A Humps, 3-keto-L-gulonat 32.3 1.8E+02 0.0062 24.4 8.4 93 222-325 40-135 (216)
199 3exr_A RMPD (hexulose-6-phosph 32.3 2.3E+02 0.008 24.0 9.7 96 222-327 42-142 (221)
200 1thf_D HISF protein; thermophI 32.2 82 0.0028 27.1 6.3 51 287-338 64-120 (253)
201 4adt_A Pyridoxine biosynthetic 32.1 51 0.0018 29.9 4.9 86 225-327 66-153 (297)
202 1me8_A Inosine-5'-monophosphat 32.1 1E+02 0.0036 29.9 7.5 91 226-329 271-384 (503)
203 3mm4_A Histidine kinase homolo 31.9 2.1E+02 0.0072 23.4 11.8 51 287-339 136-194 (206)
204 1qo2_A Molecule: N-((5-phospho 31.9 1.5E+02 0.0053 25.2 8.0 67 260-327 146-224 (241)
205 3lrk_A Alpha-galactosidase 1; 31.8 1.3E+02 0.0043 29.4 7.8 42 286-328 97-151 (479)
206 3l9w_A Glutathione-regulated p 31.5 2.4E+02 0.0083 26.5 9.9 113 201-332 14-128 (413)
207 3l8h_A Putative haloacid dehal 31.4 1.4E+02 0.0048 23.6 7.2 54 286-340 33-116 (179)
208 3gl9_A Response regulator; bet 31.0 1.5E+02 0.0052 21.5 12.5 75 261-337 36-118 (122)
209 3ib6_A Uncharacterized protein 31.0 1.6E+02 0.0053 23.8 7.6 39 286-325 40-85 (189)
210 3sr7_A Isopentenyl-diphosphate 30.9 1.5E+02 0.005 27.7 8.0 65 260-326 157-237 (365)
211 3l0g_A Nicotinate-nucleotide p 30.8 1.2E+02 0.004 27.7 7.0 63 287-353 196-262 (300)
212 3cz5_A Two-component response 30.8 1.7E+02 0.006 22.1 15.0 111 218-339 7-123 (153)
213 1vrd_A Inosine-5'-monophosphat 30.5 1.2E+02 0.0042 29.2 7.7 64 260-325 238-305 (494)
214 3w01_A Heptaprenylglyceryl pho 30.2 1.5E+02 0.0052 25.8 7.4 66 260-327 144-215 (235)
215 2ovl_A Putative racemase; stru 29.9 3.1E+02 0.011 25.0 10.3 92 225-327 177-273 (371)
216 3ngf_A AP endonuclease, family 29.9 2.5E+02 0.0087 23.9 9.2 45 258-302 23-67 (269)
217 3lte_A Response regulator; str 29.8 1.6E+02 0.0055 21.4 11.9 78 260-339 39-123 (132)
218 3tqv_A Nicotinate-nucleotide p 29.8 1.2E+02 0.0042 27.3 7.0 64 286-353 186-253 (287)
219 3tha_A Tryptophan synthase alp 29.6 34 0.0011 30.4 3.1 40 286-327 188-228 (252)
220 3h7u_A Aldo-keto reductase; st 29.3 2.1E+02 0.0073 25.9 8.9 35 201-236 158-192 (335)
221 3fvv_A Uncharacterized protein 29.3 96 0.0033 25.6 6.1 39 286-325 98-136 (232)
222 3l5a_A NADH/flavin oxidoreduct 29.1 2.1E+02 0.0072 27.1 8.9 103 226-330 225-350 (419)
223 1viz_A PCRB protein homolog; s 29.0 93 0.0032 27.3 5.9 43 283-327 167-211 (240)
224 2pr7_A Haloacid dehalogenase/e 28.9 64 0.0022 24.0 4.5 16 287-302 25-40 (137)
225 3btn_A Antizyme inhibitor 1; T 28.9 3.8E+02 0.013 25.4 13.3 103 216-336 37-144 (448)
226 2q5c_A NTRC family transcripti 28.8 2.5E+02 0.0086 23.3 9.3 95 218-327 53-150 (196)
227 3hg3_A Alpha-galactosidase A; 28.8 72 0.0025 30.3 5.5 41 286-327 87-140 (404)
228 3kto_A Response regulator rece 28.6 1.8E+02 0.0061 21.5 9.1 106 218-337 8-122 (136)
229 3nl6_A Thiamine biosynthetic b 28.5 1.7E+02 0.0058 28.9 8.4 56 265-325 79-137 (540)
230 4f3h_A Fimxeal, putative uncha 28.3 59 0.002 28.1 4.6 59 265-325 172-240 (250)
231 2p3e_A Diaminopimelate decarbo 28.3 3.6E+02 0.012 25.0 11.7 88 230-335 49-139 (420)
232 1h5y_A HISF; histidine biosynt 28.2 1.9E+02 0.0065 24.3 8.0 77 261-338 157-247 (253)
233 1nsj_A PRAI, phosphoribosyl an 28.2 2.7E+02 0.0092 23.4 10.0 63 259-327 64-127 (205)
234 2y88_A Phosphoribosyl isomeras 28.1 1.5E+02 0.0052 25.1 7.3 67 260-327 151-226 (244)
235 1zgd_A Chalcone reductase; pol 28.0 2.1E+02 0.0073 25.6 8.5 35 201-236 146-180 (312)
236 2nyv_A Pgpase, PGP, phosphogly 28.0 2.3E+02 0.008 23.1 8.3 12 323-334 161-172 (222)
237 1k68_A Phytochrome response re 27.9 1.8E+02 0.0061 21.3 12.8 66 271-337 55-127 (140)
238 3hv2_A Response regulator/HD d 27.8 2E+02 0.0068 21.8 14.4 107 218-336 16-128 (153)
239 2c6q_A GMP reductase 2; TIM ba 27.8 71 0.0024 29.6 5.2 37 287-325 150-188 (351)
240 3vab_A Diaminopimelate decarbo 27.7 4E+02 0.014 25.2 11.1 68 261-336 87-157 (443)
241 4do4_A Alpha-N-acetylgalactosa 27.4 75 0.0026 29.6 5.4 42 286-328 86-141 (400)
242 2f6u_A GGGPS, (S)-3-O-geranylg 27.3 84 0.0029 27.4 5.3 43 283-327 175-219 (234)
243 2og9_A Mandelate racemase/muco 27.2 3E+02 0.01 25.4 9.7 92 225-327 193-289 (393)
244 3s83_A Ggdef family protein; s 27.2 73 0.0025 27.5 5.0 40 286-327 199-238 (259)
245 2wm8_A MDP-1, magnesium-depend 27.0 79 0.0027 25.6 5.0 34 286-320 74-108 (187)
246 3jte_A Response regulator rece 26.8 2E+02 0.0067 21.4 13.0 49 287-336 66-118 (143)
247 1mdl_A Mandelate racemase; iso 26.8 2.9E+02 0.01 25.1 9.4 93 225-328 175-272 (359)
248 4hjf_A Ggdef family protein; s 26.8 87 0.003 28.7 5.6 51 286-338 272-328 (340)
249 3to5_A CHEY homolog; alpha(5)b 26.5 2.2E+02 0.0076 21.9 10.7 74 264-338 50-130 (134)
250 3h7r_A Aldo-keto reductase; st 26.4 2.6E+02 0.0089 25.3 8.9 35 201-236 154-188 (331)
251 1qwk_A Aldose reductase, aldo- 26.3 2.4E+02 0.0081 25.3 8.5 35 201-236 133-167 (317)
252 1ydn_A Hydroxymethylglutaryl-C 26.3 3.1E+02 0.01 24.2 9.2 55 286-340 123-195 (295)
253 3q9s_A DNA-binding response re 26.2 3E+02 0.01 23.3 11.3 51 287-338 98-151 (249)
254 3rqi_A Response regulator prot 26.1 2.5E+02 0.0084 22.3 9.6 74 261-335 41-119 (184)
255 1vbj_A Prostaglandin F synthas 25.9 2.4E+02 0.0082 24.8 8.3 35 201-236 124-158 (281)
256 2qgy_A Enolase from the enviro 25.9 3.6E+02 0.012 24.9 10.0 91 226-327 181-276 (391)
257 1tqx_A D-ribulose-5-phosphate 25.8 1E+02 0.0035 26.7 5.5 89 223-324 49-143 (227)
258 1gte_A Dihydropyrimidine dehyd 25.7 4E+02 0.014 28.3 11.3 91 227-327 693-817 (1025)
259 1ujp_A Tryptophan synthase alp 25.6 3.5E+02 0.012 23.8 9.6 71 226-302 80-150 (271)
260 4f40_A Prostaglandin F2-alpha 25.2 1.8E+02 0.0062 25.7 7.4 30 207-236 138-167 (288)
261 1us0_A Aldose reductase; oxido 25.2 2.5E+02 0.0085 25.1 8.4 35 201-236 140-174 (316)
262 2qvg_A Two component response 25.0 2.1E+02 0.0072 21.1 8.6 49 287-336 76-130 (143)
263 1l6r_A Hypothetical protein TA 25.0 81 0.0028 26.7 4.8 36 286-322 28-63 (227)
264 3f6p_A Transcriptional regulat 25.0 2E+02 0.0067 20.8 9.9 50 287-337 63-115 (120)
265 2r6o_A Putative diguanylate cy 24.9 93 0.0032 27.8 5.3 111 201-326 130-261 (294)
266 3tlq_A Regulatory protein YDIV 24.9 62 0.0021 27.9 4.0 37 286-324 188-224 (242)
267 1f3t_A ODC, ornithine decarbox 24.8 4.3E+02 0.015 24.6 11.3 50 285-335 91-143 (425)
268 3i42_A Response regulator rece 24.6 2E+02 0.0069 20.8 9.3 78 261-340 37-121 (127)
269 3f6c_A Positive transcription 24.5 2.1E+02 0.0071 20.9 11.0 51 287-339 63-118 (134)
270 1nvm_A HOA, 4-hydroxy-2-oxoval 24.5 1.5E+02 0.0051 27.2 6.8 105 225-338 69-187 (345)
271 3rcm_A TATD family hydrolase; 24.5 3.7E+02 0.013 23.8 11.0 156 167-338 17-199 (287)
272 1xm3_A Thiazole biosynthesis p 24.4 1.8E+02 0.0061 25.6 7.0 42 285-327 166-208 (264)
273 3rcy_A Mandelate racemase/muco 24.3 3E+02 0.01 26.0 9.1 91 226-327 190-285 (433)
274 3glk_A Acetyl-COA carboxylase 24.3 2.1E+02 0.0072 28.0 8.2 63 259-322 111-179 (540)
275 1vc4_A Indole-3-glycerol phosp 24.2 3.5E+02 0.012 23.5 13.9 137 168-326 36-181 (254)
276 4e38_A Keto-hydroxyglutarate-a 24.1 3.5E+02 0.012 23.4 12.0 78 261-341 49-129 (232)
277 2gou_A Oxidoreductase, FMN-bin 24.1 4.2E+02 0.014 24.3 10.6 73 263-337 255-338 (365)
278 2v82_A 2-dehydro-3-deoxy-6-pho 24.0 2.2E+02 0.0077 23.5 7.4 71 265-338 26-100 (212)
279 2qjg_A Putative aldolase MJ040 23.8 1.3E+02 0.0043 26.3 5.9 63 265-328 106-188 (273)
280 3n53_A Response regulator rece 23.7 2.2E+02 0.0076 21.0 9.3 105 218-336 5-117 (140)
281 3kzp_A LMO0111 protein, putati 23.7 59 0.002 27.6 3.6 36 286-323 189-224 (235)
282 1jvn_A Glutamine, bifunctional 23.6 2.5E+02 0.0086 27.6 8.6 68 260-327 454-527 (555)
283 1qkk_A DCTD, C4-dicarboxylate 23.5 2.4E+02 0.0082 21.3 9.7 48 287-335 64-115 (155)
284 3hdv_A Response regulator; PSI 23.3 2.2E+02 0.0076 20.8 12.1 67 272-339 53-125 (136)
285 3f7j_A YVGN protein; aldo-keto 23.3 2.4E+02 0.0082 24.7 7.7 35 201-236 121-155 (276)
286 1mi3_A Xylose reductase, XR; a 23.2 2.4E+02 0.0083 25.3 7.9 35 201-236 149-183 (322)
287 2qgh_A Diaminopimelate decarbo 23.1 4.6E+02 0.016 24.4 11.2 67 261-335 71-140 (425)
288 3cu2_A Ribulose-5-phosphate 3- 23.1 43 0.0015 29.3 2.6 116 166-323 25-152 (237)
289 2hxt_A L-fuconate dehydratase; 23.0 3.8E+02 0.013 25.3 9.6 93 225-328 228-326 (441)
290 1u83_A Phosphosulfolactate syn 22.8 3.3E+02 0.011 24.3 8.3 67 259-327 111-193 (276)
291 3kzx_A HAD-superfamily hydrola 22.8 2E+02 0.0069 23.4 6.9 33 286-319 109-141 (231)
292 1rd5_A Tryptophan synthase alp 22.8 26 0.00089 30.9 1.1 36 67-102 25-65 (262)
293 2j66_A BTRK, decarboxylase; bu 22.7 4.6E+02 0.016 24.3 10.6 109 207-335 9-123 (428)
294 3ajx_A 3-hexulose-6-phosphate 22.7 1.6E+02 0.0056 24.2 6.2 65 259-325 11-83 (207)
295 4ab4_A Xenobiotic reductase B; 22.6 4.6E+02 0.016 24.2 10.0 65 263-331 247-313 (362)
296 2wzm_A Aldo-keto reductase; ox 22.6 2.2E+02 0.0077 25.1 7.4 65 167-236 96-161 (283)
297 2l69_A Rossmann 2X3 fold prote 22.6 2.4E+02 0.0081 20.8 6.3 52 259-313 63-115 (134)
298 3gka_A N-ethylmaleimide reduct 22.6 4.1E+02 0.014 24.5 9.4 65 263-331 255-321 (361)
299 3t6k_A Response regulator rece 22.5 2.4E+02 0.0081 20.9 10.7 76 261-337 38-120 (136)
300 3cu2_A Ribulose-5-phosphate 3- 22.4 57 0.0019 28.5 3.2 29 71-102 25-53 (237)
301 1o4u_A Type II quinolic acid p 22.4 1.3E+02 0.0046 27.0 5.8 65 286-353 180-251 (285)
302 1rvk_A Isomerase/lactonizing e 22.3 4.5E+02 0.015 24.0 10.4 91 226-327 187-283 (382)
303 1twi_A Diaminopimelate decarbo 22.3 4.6E+02 0.016 24.4 10.0 49 285-334 91-142 (434)
304 1hw6_A 2,5-diketo-D-gluconic a 22.2 2.4E+02 0.0081 24.8 7.5 66 166-236 87-153 (278)
305 3b3e_A YVGN protein; aldo-keto 22.1 2.5E+02 0.0086 25.2 7.7 63 167-236 126-189 (310)
306 3gnn_A Nicotinate-nucleotide p 22.0 1.6E+02 0.0053 26.8 6.1 62 287-352 198-263 (298)
307 3paj_A Nicotinate-nucleotide p 22.0 4.5E+02 0.016 23.9 11.3 83 226-327 219-304 (320)
308 3h5i_A Response regulator/sens 21.9 1.6E+02 0.0055 22.0 5.6 48 287-336 68-119 (140)
309 3ve9_A Orotidine-5'-phosphate 21.9 1.6E+02 0.0054 25.2 6.0 103 222-337 35-148 (215)
310 3krb_A Aldose reductase; ssgci 21.9 2.7E+02 0.0091 25.2 8.0 35 201-236 156-190 (334)
311 4eze_A Haloacid dehalogenase-l 21.9 1.1E+02 0.0039 27.5 5.3 40 285-325 184-223 (317)
312 2qjg_A Putative aldolase MJ040 21.9 3.2E+02 0.011 23.5 8.3 62 260-325 168-236 (273)
313 2rdx_A Mandelate racemase/muco 21.7 2.9E+02 0.01 25.3 8.3 9 317-325 286-294 (379)
314 2agk_A 1-(5-phosphoribosyl)-5- 21.5 1.2E+02 0.004 26.8 5.2 43 285-328 189-238 (260)
315 2fli_A Ribulose-phosphate 3-ep 21.5 1.3E+02 0.0044 25.1 5.4 66 223-301 47-114 (220)
316 3v1h_A 1-phosphatidylinositol 21.5 74 0.0025 29.0 3.9 31 77-107 50-80 (306)
317 1vp5_A 2,5-diketo-D-gluconic a 21.3 2.9E+02 0.0099 24.6 7.9 62 167-236 104-166 (298)
318 3buv_A 3-OXO-5-beta-steroid 4- 21.3 2.3E+02 0.0078 25.5 7.3 34 201-235 149-182 (326)
319 3hv8_A Protein FIMX; EAL phosp 21.2 1.1E+02 0.0038 26.5 5.0 38 286-325 212-249 (268)
320 3m9l_A Hydrolase, haloacid deh 21.0 2.6E+02 0.0089 22.3 7.1 16 287-302 77-92 (205)
321 1v5x_A PRA isomerase, phosphor 21.0 3.4E+02 0.011 22.8 7.8 62 259-327 63-125 (203)
322 3q94_A Fructose-bisphosphate a 20.9 1.5E+02 0.0052 26.7 5.8 112 201-324 32-177 (288)
323 2bgs_A Aldose reductase; holoe 20.8 2.9E+02 0.0098 25.2 7.9 35 201-236 170-204 (344)
324 4avf_A Inosine-5'-monophosphat 20.7 2.5E+02 0.0086 27.1 7.9 59 265-325 235-297 (490)
325 4eqa_C PA1845 protein, putativ 20.7 1.3E+02 0.0046 22.7 4.5 60 27-108 28-88 (153)
326 3e58_A Putative beta-phosphogl 20.7 3.1E+02 0.011 21.5 7.7 33 286-319 95-127 (214)
327 1m5w_A Pyridoxal phosphate bio 20.6 1.4E+02 0.005 26.1 5.4 37 286-324 117-153 (243)
328 3h9u_A Adenosylhomocysteinase; 20.6 5.6E+02 0.019 24.4 10.1 72 265-337 61-140 (436)
329 2gkg_A Response regulator homo 20.6 2.4E+02 0.008 20.1 10.2 50 287-338 67-122 (127)
330 2gwr_A DNA-binding response re 20.6 3.6E+02 0.012 22.2 9.8 74 265-339 43-120 (238)
331 2ps2_A Putative mandelate race 20.4 4.2E+02 0.014 24.1 9.1 15 313-327 284-298 (371)
332 3ilh_A Two component response 20.4 2.6E+02 0.009 20.5 14.1 70 270-340 59-138 (146)
333 3c3w_A Two component transcrip 20.3 2.6E+02 0.009 23.0 7.2 37 287-325 64-103 (225)
334 2ols_A Phosphoenolpyruvate syn 20.3 1.3E+02 0.0045 31.2 6.0 47 287-335 737-785 (794)
335 1afs_A 3-alpha-HSD, 3-alpha-hy 20.2 2.3E+02 0.0079 25.4 7.1 34 201-235 146-179 (323)
No 1
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=100.00 E-value=1.7e-54 Score=400.07 Aligned_cols=244 Identities=23% Similarity=0.332 Sum_probs=211.0
Q ss_pred CCCCcceEEEecCCCCCCCCcchhhhcccccchHHHHHHHHhCCCCEEEEeeeeecCCcEEEEcCCCcccccCCcccccc
Q 040734 42 FRIPKFLVVGHRGHGMNVLQSSDKRMQAIKENSIASFNSSAKYPLDFIEFDVQVTKDGWPVIFHDDVIVSEDNGTIFEKR 121 (361)
Q Consensus 42 ~~~~~~~iiaHRG~~~~~~~~~~~~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~g~~~~~~ 121 (361)
-.+.+|.+|||||+++ .+||||++||++|++.|||+||+|||+||||++||+||.+++|+|||. +.
T Consensus 7 ~~~~~p~iiaHRG~~~-----------~~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~~~---g~ 72 (252)
T 2pz0_A 7 HHSMKTLVIAHRGDSK-----------NVPENTIAAFKRAMELGADGIELDVQLTKDGHLVVIHDETVDRTTNGE---GF 72 (252)
T ss_dssp ----CCEEEEETTTTT-----------TSCTTSHHHHHHHHHHTCSEEEEEEEECTTCCEEECSSSBSTTTSSCC---SB
T ss_pred cccCCceEEEcCCCCC-----------CCCcchHHHHHHHHHcCCCEEEEEEEEecCCeEEEEcCCcccccCCCC---cc
Confidence 3457899999999987 799999999999999999999999999999999999999999999998 99
Q ss_pred ccccCHHHHhccCCccccccccccccccccCCcccccccccCCcccCHHHHHHhCCC-CceEEEEEecCCccchhhhHHH
Q 040734 122 ITELSLSEFLSYGPQREQGKIGKSLLRKTKDGKILHWNVEIDDSLCTLQEAFQQVDP-NVGFNVELKFDDHIVYEQDYLI 200 (361)
Q Consensus 122 v~d~t~~eL~~l~~~~d~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~EvL~~~~~-~~~l~iEiK~~~~~~~~~~~~~ 200 (361)
|.++||+||+++ ++|+|+.+. +.+++||||+|+|+++++ ++.++||||.+... ++
T Consensus 73 v~~~t~~eL~~l----~~~~~~~~~--------------~~~~~iPtL~evL~~~~~~~~~l~iEiK~~~~~-~~----- 128 (252)
T 2pz0_A 73 VKDFTLEEIKKL----DAGIKFGEK--------------FAGERIPTLYEVFELIGDKDFLVNIEIKSGIVL-YP----- 128 (252)
T ss_dssp GGGSCHHHHTTS----CSSTTTCGG--------------GTTCCCCBHHHHHHHHTTSCCEEEEEECCSSCC-CT-----
T ss_pred hhhCcHHHHhhc----CCCCCCCCC--------------CCCCcCCCHHHHHHHhhhcCCeEEEEeCCCCcc-cH-----
Confidence 999999999999 678776543 367899999999999974 79999999986421 12
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCc
Q 040734 201 RVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVK 280 (361)
Q Consensus 201 ~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~ 280 (361)
.+++.++++++++++.++++++||++..|+.+++..|++++++++..... + ...+++..++.++++++.
T Consensus 129 ~~~~~v~~~l~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~---~--------~~~~~~~~~~~~i~~~~~ 197 (252)
T 2pz0_A 129 GIEEKLIKAIKEYNFEERVIISSFNHYSLRDVKKMAPHLKIGLLYQCGLV---E--------PWHMALRMEAYSLHPFYF 197 (252)
T ss_dssp THHHHHHHHHHHTTCTTTEEEEESBHHHHHHHHHHCTTSEEEEEECSBCS---S--------THHHHHHTTCSEEEEBGG
T ss_pred HHHHHHHHHHHhcCCCCCEEEEeCCHHHHHHHHHHCCCCCEEEEecCccc---c--------HHHHHHHcCCeEEecchh
Confidence 46788999999999999999999999999999999999999998864321 1 124566788999998876
Q ss_pred cccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHHHHHHHHHh
Q 040734 281 GVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEITEAVYDM 338 (361)
Q Consensus 281 ~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~~l~~~ 338 (361)
.+ ++++|+.+|++|+.|++| |+|+++++.+++ ++|||||+||+|+.+.+++.++
T Consensus 198 ~~--~~~~v~~~~~~G~~v~~w-Tvn~~~~~~~l~-~~GvdgIiTD~P~~~~~~l~~~ 251 (252)
T 2pz0_A 198 NI--IPELVEGCKKNGVKLFPW-TVDRKEDMERMI-KAGVDGIITDDPETLINLVRKG 251 (252)
T ss_dssp GC--CHHHHHHHHHTTCEECCB-CCCSHHHHHHHH-HHTCSEEEESCHHHHHHHHC--
T ss_pred cC--CHHHHHHHHHCCCEEEEE-CCCCHHHHHHHH-HcCCCEEEcCCHHHHHHHHhhc
Confidence 54 899999999999999999 999999999997 6999999999999999988654
No 2
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=100.00 E-value=1.1e-53 Score=394.77 Aligned_cols=245 Identities=24% Similarity=0.293 Sum_probs=212.7
Q ss_pred CCCCcceEEEecCCCCCCCCcchhhhcccccchHHHHHHHHhCCCCEEEEeeeeecCCcEEEEcCCCcccccCCcccccc
Q 040734 42 FRIPKFLVVGHRGHGMNVLQSSDKRMQAIKENSIASFNSSAKYPLDFIEFDVQVTKDGWPVIFHDDVIVSEDNGTIFEKR 121 (361)
Q Consensus 42 ~~~~~~~iiaHRG~~~~~~~~~~~~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~g~~~~~~ 121 (361)
+..+.|+||||||+++ .+||||++||+.|++.|+|+||+|||+|+||++||+||.+++|+|+|. +.
T Consensus 5 ~~~~~p~iiaHRG~~~-----------~~pENTl~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~~~---~~ 70 (252)
T 3qvq_A 5 AYSFLPQVIAHRGSSG-----------QAPENTLASLHLAGQQGIKWVEIDVMLSGDGIPVIFHDDYLSRTTDGD---GL 70 (252)
T ss_dssp GGGGCCSEEEETTTTT-----------TSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECCCSBSTTTSSCC---SB
T ss_pred cCCCCCEEEEeCCCCC-----------CCCccHHHHHHHHHHcCCCEEEEEEEECCCCcEEEECCCccccccCCC---ce
Confidence 3446789999999988 799999999999999999999999999999999999999999999998 99
Q ss_pred ccccCHHHHhccCCccccccccccccccccCCcccccccccCCcccCHHHHHHhCC-CCceEEEEEecCCccchhhhHHH
Q 040734 122 ITELSLSEFLSYGPQREQGKIGKSLLRKTKDGKILHWNVEIDDSLCTLQEAFQQVD-PNVGFNVELKFDDHIVYEQDYLI 200 (361)
Q Consensus 122 v~d~t~~eL~~l~~~~d~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~EvL~~~~-~~~~l~iEiK~~~~~~~~~~~~~ 200 (361)
|.++||+||++| ++|+|+.+. +.+++||||+|+|++++ .++.++||||..... ..
T Consensus 71 v~~~t~~el~~l----~~~~~~~~~--------------~~~~~iptL~evl~~~~~~~~~l~iEiK~~~~~------~~ 126 (252)
T 3qvq_A 71 IYKTPLAELKQL----DAGSWKGQE--------------YQQETIPTLLEAIEVISQYGMGLNLELKPCEGL------EE 126 (252)
T ss_dssp GGGSCHHHHTTS----CSSTTTCGG--------------GTTCCCCBHHHHHHHHHHTTCEEEEEECCCTTC------HH
T ss_pred eecCcHHHHhcC----CCCCccCcc--------------CCCCcCcCHHHHHHHHhccCcEEEEEecCCCCc------cH
Confidence 999999999999 678876543 35789999999999997 589999999965321 12
Q ss_pred HHHHHHHHHHHHhcCC-CCEEEEcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCC
Q 040734 201 RVIQAILKIVFEFAEN-RPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEV 279 (361)
Q Consensus 201 ~~v~~vl~~l~~~~~~-~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~ 279 (361)
.+++.+.+++++++.. ++++++||++..|+.+++..|++++++++..... ....++...++.++++++
T Consensus 127 ~~~~~v~~~l~~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~-----------~~~~~~~~~~~~~i~~~~ 195 (252)
T 3qvq_A 127 ETIAASVEVLKQHWPQDLPLLFSSFNYFALVSAKALWPEIARGYNVSAIPS-----------AWQERLEHLDCAGLHIHQ 195 (252)
T ss_dssp HHHHHHHHHHHHHSCTTSCEEEEESCHHHHHHHHHHCTTSCEEEECSSCCT-----------THHHHHHHHTCSEEEEEG
T ss_pred HHHHHHHHHHHHhCcccCCEEEEeCCHHHHHHHHHHCCCCcEEEEEecCch-----------hHHHHHHHcCCeEEecch
Confidence 4667788888888764 6899999999999999999999999999864321 122456678899999887
Q ss_pred ccccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHHHHHHHHHhc
Q 040734 280 KGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEITEAVYDMI 339 (361)
Q Consensus 280 ~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~~l~~~~ 339 (361)
..+ ++++|+.+|++|++|++| |||+++++.+++ .+|||||+||+|+.+.+++++..
T Consensus 196 ~~~--~~~~v~~~~~~G~~v~~W-Tvn~~~~~~~l~-~~GVdgIiTD~P~~~~~~l~~~~ 251 (252)
T 3qvq_A 196 SFF--DVQQVSDIKAAGYKVLAF-TINDESLALKLY-NQGLDAVFSDYPQKIQSAIDSHI 251 (252)
T ss_dssp GGC--CHHHHHHHHHTTCEEEEE-CCCCHHHHHHHH-HTTCCEEEESSHHHHHHHHHHCC
T ss_pred hhC--CHHHHHHHHHCCCEEEEE-cCCCHHHHHHHH-HcCCCEEEeCCHHHHHHHHHHhc
Confidence 754 999999999999999999 999999999997 69999999999999999998753
No 3
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=100.00 E-value=5.4e-53 Score=388.92 Aligned_cols=237 Identities=23% Similarity=0.290 Sum_probs=205.0
Q ss_pred CcceEEEecCCCCCCCCcchhhhcccccchHHHHHHHHhCCCCEEEEeeeeecCCcEEEEcCCCcccccCCccccccccc
Q 040734 45 PKFLVVGHRGHGMNVLQSSDKRMQAIKENSIASFNSSAKYPLDFIEFDVQVTKDGWPVIFHDDVIVSEDNGTIFEKRITE 124 (361)
Q Consensus 45 ~~~~iiaHRG~~~~~~~~~~~~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~g~~~~~~v~d 124 (361)
+.|+||||||+++ .+||||++||++|++.|+|+||+|||+||||++||+||.+++|+|+|. +.|.+
T Consensus 5 ~~~~iiaHRG~~~-----------~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~R~t~~~---g~v~~ 70 (247)
T 2otd_A 5 PYPRIVAHRGGGK-----------LAPENTLAAIDVGAKYGHKMIEFDAKLSKDGEIFLLHDDNLERTSNGW---GVAGE 70 (247)
T ss_dssp CCCSEEETTTTTT-----------SSCSSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSSBSSTTSSCC---SBGGG
T ss_pred CCCeEEECCCCCC-----------CCCchhHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCCCccccCCCC---ccHhh
Confidence 4578999999987 799999999999999999999999999999999999999999999998 99999
Q ss_pred cCHHHHhccCCccccccccccccccccCCcccccccccCCcccCHHHHHHhCC-CCceEEEEEecCCccchhhhHHHHHH
Q 040734 125 LSLSEFLSYGPQREQGKIGKSLLRKTKDGKILHWNVEIDDSLCTLQEAFQQVD-PNVGFNVELKFDDHIVYEQDYLIRVI 203 (361)
Q Consensus 125 ~t~~eL~~l~~~~d~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~EvL~~~~-~~~~l~iEiK~~~~~~~~~~~~~~~v 203 (361)
+||+||+++ ++|+|+.+. +.+++||||+|+|++++ .++.++||+|.+... . ..++
T Consensus 71 ~t~~eL~~l----~~g~~~~~~--------------~~~~~iptL~evl~~~~~~~~~l~iEiK~~~~~-~-----~~~~ 126 (247)
T 2otd_A 71 LNWQDLLRV----DAGSWYSKA--------------FKGEPLPLLSQVAERCREHGMMANIEIKPTTGT-G-----PLTG 126 (247)
T ss_dssp SCHHHHTTC----CSSTTTCGG--------------GTTCCCCBHHHHHHHHHHTTCEEEEEECCCTTC-H-----HHHH
T ss_pred CcHHHHhhC----CCCCccCCC--------------CCCCcCCCHHHHHHHHHhcCCEEEEEECCCCCc-c-----hHHH
Confidence 999999999 678876543 35789999999999997 679999999986531 1 1356
Q ss_pred HHHHHHHHHh--cCCCCEEEEcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcc
Q 040734 204 QAILKIVFEF--AENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKG 281 (361)
Q Consensus 204 ~~vl~~l~~~--~~~~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~ 281 (361)
+.++++++++ +.. +++++||++..|+.+++..|++++++++..... .+ ..+++..++.++++++..
T Consensus 127 ~~v~~~l~~~~~~~~-~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~--------~~---~~~~~~~~~~~i~~~~~~ 194 (247)
T 2otd_A 127 KMVALAARQLWAGMT-PPLLSSFEIDALEAAQQAAPELPRGLLLDEWRD--------DW---RELTARLGCVSIHLNHKL 194 (247)
T ss_dssp HHHHHHHHHHTTTSC-CCEEEESCHHHHHHHHHHCTTSCEEEEESSCCT--------TH---HHHHHHHTCSEEEEEGGG
T ss_pred HHHHHHHHHHhcCcC-CEEEEcCCHHHHHHHHHHCCCCCEEEEecCCcc--------cH---HHHHHHcCCeEEecChHh
Confidence 7888888877 444 999999999999999999999999999864221 11 245667788999988765
Q ss_pred ccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHHHHHHH
Q 040734 282 VFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEITEAV 335 (361)
Q Consensus 282 ~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~~l 335 (361)
+ ++++++.+|++|+.|++| |+|+++++.+++ ++|||||+||+|+.+.+++
T Consensus 195 ~--~~~~v~~~~~~G~~v~~w-Tvn~~~~~~~l~-~~GvdgI~TD~p~~~~~~l 244 (247)
T 2otd_A 195 L--DKARVMQLKDAGLRILVY-TVNKPQHAAELL-RWGVDCICTDAIDVIGPNF 244 (247)
T ss_dssp C--CHHHHHHHHHTTCEEEEE-CCCCHHHHHHHH-HHTCSEEEESCTTTSCTTC
T ss_pred C--CHHHHHHHHHCCCEEEEE-ccCCHHHHHHHH-HcCCCEEEeCCHHHHHHHH
Confidence 4 899999999999999999 999999999997 7999999999999876654
No 4
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=100.00 E-value=6.3e-53 Score=389.10 Aligned_cols=242 Identities=15% Similarity=0.190 Sum_probs=210.0
Q ss_pred cceEEEecCCCCCCCCcchhhhcccccchHHHHHHHHhCCCCEEEEeeeeecCCcEEEEcCCCcccccCCcccccccccc
Q 040734 46 KFLVVGHRGHGMNVLQSSDKRMQAIKENSIASFNSSAKYPLDFIEFDVQVTKDGWPVIFHDDVIVSEDNGTIFEKRITEL 125 (361)
Q Consensus 46 ~~~iiaHRG~~~~~~~~~~~~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~g~~~~~~v~d~ 125 (361)
.|+||||||+++ .+||||++||++|++.|+|+||+|||+|+||++||+||.+++|+|+|. +.|.++
T Consensus 2 mp~iiaHRG~~~-----------~~pENTl~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~~~---g~v~~~ 67 (250)
T 3ks6_A 2 MTRIASHRGGTL-----------EFGDSTPHGFTATAAMALEEVEFDLHPTADGAIVVHHDPTLDATTDMT---GAIVDM 67 (250)
T ss_dssp CCEEEEETTTHH-----------HHCTTCHHHHHHHHTSSSSEEEEEEEECTTSCEEECSSSBSTTTBSCC---SBGGGS
T ss_pred CceEEECCCCCC-----------CCCcchHHHHHHHHHcCCCEEEEEEeEccCCCEEEECCCccccccCCC---CeeecC
Confidence 478999999987 799999999999999999999999999999999999999999999998 999999
Q ss_pred CHHHHhccCCccccccccccccccccCCcccccccccCCcccCHHHHHHhCC-CCceEEEEEecCCcc-chhhhHHHHHH
Q 040734 126 SLSEFLSYGPQREQGKIGKSLLRKTKDGKILHWNVEIDDSLCTLQEAFQQVD-PNVGFNVELKFDDHI-VYEQDYLIRVI 203 (361)
Q Consensus 126 t~~eL~~l~~~~d~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~EvL~~~~-~~~~l~iEiK~~~~~-~~~~~~~~~~v 203 (361)
||+||+++ ++|.| .+++||||+|+|++++ +++.++||||.+... .++ .++
T Consensus 68 t~~el~~l----~~~~~-------------------~~~~iptL~evl~~~~~~~~~l~iEiK~~~~~~~~~-----~~~ 119 (250)
T 3ks6_A 68 TLAKVKTA----TIRYG-------------------AGSHPMTLEELCALYVDSHVNFRCEIKPGVDGLPYE-----GFV 119 (250)
T ss_dssp CHHHHHHC----CBTTS-------------------TTCCCEEHHHHHHHHTTCSCEEEEEECCCTTSCCCT-----THH
T ss_pred cHHHHhcC----CCCCC-------------------CCccCcCHHHHHHHHhccCcEEEEEeCCCcccCcch-----HHH
Confidence 99999999 45543 4588999999999997 689999999985321 111 468
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcccc
Q 040734 204 QAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVF 283 (361)
Q Consensus 204 ~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~ 283 (361)
+.++++++++++.++++++||++..|+++++..|+++++++.... .....+.....++...++..+++++..
T Consensus 120 ~~v~~~l~~~~~~~~v~~~SF~~~~l~~~~~~~p~~~~~l~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 191 (250)
T 3ks6_A 120 ALVIAGLERHSMLERTTFSSFLLASMDELWKATTRPRLWLVSPSV------LQQLGPGAVIETAIAHSIHEIGVHIDT-- 191 (250)
T ss_dssp HHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCCSCEEEEECHHH------HHHHHHHHHHHHHHHTTCCEEEEEGGG--
T ss_pred HHHHHHHHhcCCCCCEEEEeCCHHHHHHHHHHCCCCcEEEEeccc------ccccchhHHHHHHHhcCCCEEecchhh--
Confidence 899999999999999999999999999999999999998775310 000123345566778889888887765
Q ss_pred CChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHHHHHHHHHhc
Q 040734 284 RNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEITEAVYDMI 339 (361)
Q Consensus 284 ~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~~l~~~~ 339 (361)
.++++|+.+|++|+.|++| |||+++++++++ ++|||||+||+|+.+.+++++..
T Consensus 192 ~~~~~v~~~~~~G~~V~~W-Tvn~~~~~~~l~-~~GVDgIiTD~P~~~~~~~~~~~ 245 (250)
T 3ks6_A 192 ADAGLMAQVQAAGLDFGCW-AAHTPSQITKAL-DLGVKVFTTDRPTLAIALRTEHR 245 (250)
T ss_dssp CCHHHHHHHHHTTCEEEEE-CCCSHHHHHHHH-HHTCSEEEESCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCEEEEE-eCCCHHHHHHHH-HcCCCEEEcCCHHHHHHHHHHhh
Confidence 4999999999999999999 999999999997 69999999999999999998754
No 5
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=100.00 E-value=9.7e-52 Score=388.67 Aligned_cols=252 Identities=20% Similarity=0.342 Sum_probs=209.5
Q ss_pred CCcceEEEecCCCCCCCCcchhhhcccccchHHHHHHH-HhCCCCEEEEeeeeecCCcEEEEcCCCcccccCCccccccc
Q 040734 44 IPKFLVVGHRGHGMNVLQSSDKRMQAIKENSIASFNSS-AKYPLDFIEFDVQVTKDGWPVIFHDDVIVSEDNGTIFEKRI 122 (361)
Q Consensus 44 ~~~~~iiaHRG~~~~~~~~~~~~~~~~pENTl~Af~~A-~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~g~~~~~~v 122 (361)
...|++|||||+++ .+||||++||++| .+.|||+||+|||+||||++||+||.+++|+|+|. +.|
T Consensus 21 ~~~~~iiAHRG~~~-----------~~PENTl~Af~~A~~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~~~---g~v 86 (287)
T 2oog_A 21 NERFTTIAHRGASG-----------YAPEHTFQAYDKSHNELKASYIEIDLQRTKDGHLVAMHDETVNRTTNGH---GKV 86 (287)
T ss_dssp SCSSEEEETTTTTT-----------TSCSSSHHHHHHHHHTSCCSEEEEEEEECTTCCEEECSSSBSTTTSSCC---SBG
T ss_pred CCcceEEecCCCCC-----------CCCchhHHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCChhcccCCCC---eeh
Confidence 35789999999987 7999999999999 69999999999999999999999999999999998 999
Q ss_pred cccCHHHHhccCCccccccccccccccccCCcccccccccCCcccCHHHHHHhCCCCceEEEEEecCCccchhhhHHHHH
Q 040734 123 TELSLSEFLSYGPQREQGKIGKSLLRKTKDGKILHWNVEIDDSLCTLQEAFQQVDPNVGFNVELKFDDHIVYEQDYLIRV 202 (361)
Q Consensus 123 ~d~t~~eL~~l~~~~d~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~EvL~~~~~~~~l~iEiK~~~~~~~~~~~~~~~ 202 (361)
.++||+||++| ++|+|+.+.++... ...+.+++||||+|+|+++++++.++||||.+.. +. .+
T Consensus 87 ~d~T~~eL~~l----~~~~~f~~~~p~~~------~~~~~~~~iPtL~evL~~~~~~~~l~IEiK~~~~--~~-----~~ 149 (287)
T 2oog_A 87 EDYTLDELKQL----DAGSWFNKKYPKYA------RASYKNAKVPTLDEILERYGPNANYYIETKSPDV--YP-----GM 149 (287)
T ss_dssp GGSCHHHHTTS----CSSHHHHHHCGGGC------CGGGTTCCCCBHHHHHHHHCTTSCEEEECCCTTT--ST-----TH
T ss_pred hhCcHHHHHhc----CCCcccCccCcccc------ccccCCccCCCHHHHHHhhCcCceEEEEECCCCC--cc-----hH
Confidence 99999999999 68888764332111 0124678999999999999878999999998642 11 36
Q ss_pred HHHHHHHHHHhcC-------CCCEEEEcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEE
Q 040734 203 IQAILKIVFEFAE-------NRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGI 275 (361)
Q Consensus 203 v~~vl~~l~~~~~-------~~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i 275 (361)
++.++++++++++ .++++++||++..|+.+++..|++++++++...... .. . ...+... ...+.++
T Consensus 150 ~~~v~~~l~~~~~~~~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~--~~---~-~~~~~~~-~~~~~~v 222 (287)
T 2oog_A 150 EEQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQ--QF---N-DQRLKEI-RSYAIGL 222 (287)
T ss_dssp HHHHHHHHHHTTCSSHHHHHTTSEEEEESCHHHHHHHHHHCTTSCEEEEECTTTGG--GC---C-HHHHHHH-HTTCSEE
T ss_pred HHHHHHHHHHcCCcccccCCCCCEEEEeCCHHHHHHHHHhCCCCcEEEEecCCccc--cc---C-HHHHHHH-hhhheEE
Confidence 7889999999998 899999999999999999999999999988643210 01 0 1111222 2335678
Q ss_pred EcCCccccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHHHHHHHHH
Q 040734 276 VSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEITEAVYD 337 (361)
Q Consensus 276 ~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~~l~~ 337 (361)
++++.. +++++|+.+|++|+.|++| |||+++++.+++ .+||||||||+|+.+.+++.+
T Consensus 223 ~~~~~~--~~~~~v~~~~~~G~~v~~w-Tvn~~~~~~~l~-~~GVdgIiTD~P~~~~~~~~~ 280 (287)
T 2oog_A 223 GPDYTD--LTEQNTHHLKDLGFIVHPY-TVNEKADMLRLN-KYGVDGVFTNFADKYKEVIKE 280 (287)
T ss_dssp EEBGGG--CCHHHHHHHHHTTCEECCB-CCCSHHHHHHHH-HHTCSEEEESCHHHHHHHHHC
T ss_pred cccHhh--cCHHHHHHHHHCCCeEEEE-eCCCHHHHHHHH-HcCCCEEEeCCHHHHHHHHhc
Confidence 777664 4899999999999999999 999999999997 699999999999999998875
No 6
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=100.00 E-value=3.7e-51 Score=389.21 Aligned_cols=264 Identities=20% Similarity=0.255 Sum_probs=212.0
Q ss_pred cceEEEecCCCCCCCCcchhhhcccccchHHHHHHHHhCCCCEEEEeeeeecCCcEEEEcCCCcccc----cCCcc---c
Q 040734 46 KFLVVGHRGHGMNVLQSSDKRMQAIKENSIASFNSSAKYPLDFIEFDVQVTKDGWPVIFHDDVIVSE----DNGTI---F 118 (361)
Q Consensus 46 ~~~iiaHRG~~~~~~~~~~~~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~----t~g~~---~ 118 (361)
.+.||||||+++ .+||||++||++|++.|+|+||+|||+||||++||+||.+|+|+ ++|.. .
T Consensus 17 ~~~iiaHRG~~~-----------~~PENTl~Af~~A~~~G~d~iE~DV~lTkDg~~Vv~HD~~l~rtt~~~~~G~~~~~~ 85 (313)
T 3l12_A 17 VVRVIGHRGARG-----------VMPENTLEGFAFTLAAGVRALEFDVVMTADGVPVVTHNHHLANAMTRDGQGHWLTGA 85 (313)
T ss_dssp BCEEEEETTTTT-----------TSCTTCHHHHHHHHHTTCCEEEEEEEECTTSCEEECSSSBCCTTTCBCTTSCBCCSS
T ss_pred CeEEEEcCCCCC-----------CCCccHHHHHHHHHHcCCCEEEEEEEECCCCCEEEECCchhcccccccCCCcccCCC
Confidence 578999999988 79999999999999999999999999999999999999999998 34431 1
Q ss_pred cccccccCHHHHhccCCccccccc-----cccccccccCCcccccccccCCcccCHHHHHHhCCC----CceEEEEEecC
Q 040734 119 EKRITELSLSEFLSYGPQREQGKI-----GKSLLRKTKDGKILHWNVEIDDSLCTLQEAFQQVDP----NVGFNVELKFD 189 (361)
Q Consensus 119 ~~~v~d~t~~eL~~l~~~~d~g~~-----~~~~~~~~~~g~~~~~~~~~~~~iptL~EvL~~~~~----~~~l~iEiK~~ 189 (361)
++.|.++||+||++| ++|.| +.+.|+.. ....+++||||+|+|++++. ++.++||||.+
T Consensus 86 ~~~v~~~t~~eL~~l----~~~~~~~~~~~~~~~~~~--------~~~~g~~iptL~evl~~~~~~~~~~~~l~IEiK~~ 153 (313)
T 3l12_A 86 ERQVAEMTYAEIRAL----DVGGLDGRTVYGRRFPDQ--------AFLTGIHVPRLGELLDLCAGYGDQAPYLLLELKSD 153 (313)
T ss_dssp CCBGGGSCHHHHHTS----BCSSCCTTSHHHHHSTTS--------CCCSSCCCCBHHHHHHHHHTTGGGCCEEEEEECCC
T ss_pred CcchhcCcHHHHhhC----CCCCccccccccccCccc--------cccCCCcCCCHHHHHHHHHhcCCCCceEEEEEccC
Confidence 358999999999999 56652 22222110 11256899999999999975 79999999987
Q ss_pred CccchhhhHHHHHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCCCEEEEccCCCcccc-----cc--------c
Q 040734 190 DHIVYEQDYLIRVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFY-----DV--------R 256 (361)
Q Consensus 190 ~~~~~~~~~~~~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~-----d~--------~ 256 (361)
............++++++++++++++.++++++||++..|+++++..|++++++++........ .+ .
T Consensus 154 ~~~~~~~~~~~~~~~~v~~~l~~~~~~~~v~i~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (313)
T 3l12_A 154 PALMHDHAARAEMVAAVLADVRRYRMEPRTVMHSFDWALLGECRRQAPDLPTSYLSQLPENADDPGEDSAKPVGPDYDRM 233 (313)
T ss_dssp GGGTTCHHHHHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCTTSCEEEEECCCC-------------CCCTTTC
T ss_pred CccccccccHHHHHHHHHHHHHHcCCCCCEEEEcCCHHHHHHHHHHCCCCcEEEEeccccccccccccccccccccchhc
Confidence 4321101122468899999999999999999999999999999999999999999865431000 00 0
Q ss_pred cccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHHHHHHHH
Q 040734 257 RNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEITEAVY 336 (361)
Q Consensus 257 ~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~~l~ 336 (361)
...+ ...++..++.++++++.. +++++|+.+|++|+.|++| |||+++++++++ ++||||||||+|+.++++++
T Consensus 234 ~~~l---~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~Gl~V~~W-TVn~~~~~~~l~-~~GVDgIiTD~P~~~~~~l~ 306 (313)
T 3l12_A 234 TESL---PQAVASAGGQLWCPYFLD--VTPELVAEAHDLGLIVLTW-TVNEPEDIRRMA-TTGVDGIVTDYPGRTQRILI 306 (313)
T ss_dssp CSCH---HHHHHHHTCSEEEEBGGG--CCHHHHHHHHHTTCEEEEB-CCCSHHHHHHHH-HHTCSEEEESCHHHHHHHHH
T ss_pred cccH---HHHHHHhCCcEEecchhc--CCHHHHHHHHHCCCEEEEE-cCCCHHHHHHHH-HcCCCEEEeCCHHHHHHHHH
Confidence 0112 234556778899888764 4999999999999999999 999999999997 79999999999999999998
Q ss_pred Hhc
Q 040734 337 DMI 339 (361)
Q Consensus 337 ~~~ 339 (361)
+++
T Consensus 307 ~~g 309 (313)
T 3l12_A 307 DMG 309 (313)
T ss_dssp HTT
T ss_pred hcC
Confidence 754
No 7
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=100.00 E-value=3e-51 Score=379.66 Aligned_cols=237 Identities=23% Similarity=0.289 Sum_probs=204.5
Q ss_pred CcceEEEecCCC--CCCCCcchhhhcccccchHHHHHHHHhCCCCEEEEeeeeecCCcEEEEcCC---CcccccCCcccc
Q 040734 45 PKFLVVGHRGHG--MNVLQSSDKRMQAIKENSIASFNSSAKYPLDFIEFDVQVTKDGWPVIFHDD---VIVSEDNGTIFE 119 (361)
Q Consensus 45 ~~~~iiaHRG~~--~~~~~~~~~~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~---~l~r~t~g~~~~ 119 (361)
..|+||||||++ + .+||||++||++|++.|+|+||+|||+||||++||+||. +++|+|||.
T Consensus 5 ~~~~iiaHRG~~~~~-----------~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~~~~l~Rtt~~~--- 70 (258)
T 2o55_A 5 IIPKIVGHRGVGKEG-----------LAPENTLRSFVLCMERNIPYIETDLRVCKTGEIVLFHGTPEGTIPFYKDGT--- 70 (258)
T ss_dssp CCCEEEEETTTTTST-----------TSCTTCHHHHHHHHHTTCCEEEEEEEECTTSCEEECCCSTTSBCTTSTTTT---
T ss_pred cCceEEECCCCCCCC-----------CCCccHHHHHHHHHHcCcCEEEEEEEEecCCeEEEEeCCCCccceeeCCCC---
Confidence 568999999999 6 799999999999999999999999999999999999999 999999998
Q ss_pred ccccccCHHHHhccCCccccccccccccccccCCcccccccccCCcccCHHHHHHhCCC---CceEEEEEecCCc-cchh
Q 040734 120 KRITELSLSEFLSYGPQREQGKIGKSLLRKTKDGKILHWNVEIDDSLCTLQEAFQQVDP---NVGFNVELKFDDH-IVYE 195 (361)
Q Consensus 120 ~~v~d~t~~eL~~l~~~~d~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~EvL~~~~~---~~~l~iEiK~~~~-~~~~ 195 (361)
+.|.++||+||++++ +| .+++||||+|+|++++. ++.++||+|.+.. ..+.
T Consensus 71 g~v~~~t~~eL~~l~----~~---------------------~~~~iptL~evl~~~~~~~~~~~l~iEiK~~~~~~~~~ 125 (258)
T 2o55_A 71 SRIGDLSLEELKRLD----VG---------------------GGHTIPSLEELFVAIEEQKFNLKLNLELKGEEWKRKES 125 (258)
T ss_dssp CBGGGSCHHHHTTCB----SS---------------------SSCBCCBHHHHHHHHHHSCSCCEEEEEECCSSSSSTTS
T ss_pred eehhhCcHHHHhhcC----CC---------------------CCCccCCHHHHHHHhhhhcCceEEEEEEccCCccccch
Confidence 999999999999983 22 45789999999999984 7999999998642 0111
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCCCEEEEc-cCCCccccccccccHHHHHHHHHhcCCcE
Q 040734 196 QDYLIRVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLT-NGGTEIFYDVRRNSLEEAVKVCLEGGLQG 274 (361)
Q Consensus 196 ~~~~~~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~-~~~~~~~~d~~~~~l~~~~~~~~~~~~~~ 274 (361)
.+++.++++++++++.++++++||++..++.+++..|++++++++ ..... +. . +.+..+...++.+
T Consensus 126 -----~~~~~v~~~l~~~~~~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~---~~----~-~~~~~~~~~~~~~ 192 (258)
T 2o55_A 126 -----GDHQRLLLLVEKYHMQERVDYCSFHHEALAHLKALCPDVKITYLFNYMGQP---TP----L-DFVEQACYGDANG 192 (258)
T ss_dssp -----SHHHHHHHHHHTTTCGGGEEEEESSHHHHHHHHHHCTTCEEEEECCTTSCC---CC----T-THHHHHHHTTCSE
T ss_pred -----HHHHHHHHHHHHcCCCCCEEEEeCCHHHHHHHHHHCCCCcEEEEEeCCCCC---CH----H-HHHHHHHhcCCeE
Confidence 467889999999999999999999999999999999999999998 33211 11 0 1122356788889
Q ss_pred EEcCCccccCChHHHHHHHHcCCEEEEeccC----CCHHHHHHHHHhcCccEEEeCChHHHHHHHHH
Q 040734 275 IVSEVKGVFRNPGAVTKIKESKLSLLTYGRL----NNVAEAVYMQHLMGIDGVIVDLVQEITEAVYD 337 (361)
Q Consensus 275 i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tv----n~~~~~~~~~~~~GVdgI~TD~p~~~~~~l~~ 337 (361)
+++++..+ ++++|+.+|++|+.|++| |+ |+++++.+++ .+|||||+||+|..+.++++.
T Consensus 193 v~~~~~~~--~~~~v~~~~~~G~~v~~w-Tv~~~~n~~~~~~~l~-~~GvdgI~TD~p~~~~~~l~~ 255 (258)
T 2o55_A 193 VSMLFHYL--TKEQVCTAHEKGLSVTVW-MPWIFDDSEEDWKKCL-ELQVDLICSNYPFGLMNFLSN 255 (258)
T ss_dssp EEEEGGGC--CHHHHHHHHHTTCEEEEE-CCTTCCCCHHHHHHHH-HHTCSEEEESCHHHHHHHHTC
T ss_pred EecChhhc--CHHHHHHHHHCCCEEEEe-eCCCCCCCHHHHHHHH-HcCCCEEEeCCHHHHHHHHHH
Confidence 98887654 899999999999999999 99 9999999997 699999999999999998863
No 8
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=7e-51 Score=379.90 Aligned_cols=248 Identities=15% Similarity=0.218 Sum_probs=204.8
Q ss_pred CcceEEEecCCCCCCCCcchhhhcccccchHHHHHHHHhCCCCEEEEeeeeecCCcEEEEcCCCccc----ccCCcc---
Q 040734 45 PKFLVVGHRGHGMNVLQSSDKRMQAIKENSIASFNSSAKYPLDFIEFDVQVTKDGWPVIFHDDVIVS----EDNGTI--- 117 (361)
Q Consensus 45 ~~~~iiaHRG~~~~~~~~~~~~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r----~t~g~~--- 117 (361)
..+++|||||+++ .+||||++||++|++.|+|+||+|||+||||++||+||.+++| +|+|+.
T Consensus 7 ~~~~iiaHRG~~~-----------~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~r~~~~tt~g~~~~~ 75 (272)
T 3ch0_A 7 ASFDIQGHRGCRG-----------LLPENTIAAFTKALLLGVTTLEFDLVISKDNRVVVSHDTFFHHEITMMVDGEDVTE 75 (272)
T ss_dssp TTCEEEETTTTTT-----------TSSTTSHHHHHHHHHHTCSEEEEEEEECTTCCEEECSSSBCCTTTCCEETTEECCT
T ss_pred ccccEEecCCCCC-----------CCCcccHHHHHHHHHcCCCEEEEeeeEcCCCcEEEeCCCcccccccccCCCccccc
Confidence 4578999999987 7999999999999999999999999999999999999999998 677751
Q ss_pred ---ccccccccCHHHHhccCCccccccccccccccccCCcccccccccCCcccCHHHHHHhCCC---CceEEEEEecCCc
Q 040734 118 ---FEKRITELSLSEFLSYGPQREQGKIGKSLLRKTKDGKILHWNVEIDDSLCTLQEAFQQVDP---NVGFNVELKFDDH 191 (361)
Q Consensus 118 ---~~~~v~d~t~~eL~~l~~~~d~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~EvL~~~~~---~~~l~iEiK~~~~ 191 (361)
.++.|.++||+||++| ++|+|+.+.|+.. ....++||||+|+|++++. ++.++||||.+..
T Consensus 76 ~~~~~~~v~d~t~~eL~~l----~~~~~~~~~~~~~---------~~~~~~iptL~evl~~~~~~~~~~~l~iEiK~~~~ 142 (272)
T 3ch0_A 76 ANEKNFNLYAMNYADIKEI----DVGMKTHPRFKSQ---------KKVPAVKPLFRELIETAEKLSAKIQYNGEIKSTVE 142 (272)
T ss_dssp TTGGGSBGGGSCHHHHTTS----CCSSSCCTTCTTS---------CCCCCCCCBHHHHHHHHHHHCSSCEEEEEECCCGG
T ss_pred ccccCceeecCCHHHHHhc----CCCCccCccCccc---------ccCCCCCcCHHHHHHHHHHhCCCceEEEEECCCcC
Confidence 2358999999999999 6788876544211 1123489999999999974 7999999998643
Q ss_pred cc-hhhhHHHHHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhc
Q 040734 192 IV-YEQDYLIRVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEG 270 (361)
Q Consensus 192 ~~-~~~~~~~~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~ 270 (361)
.. ........+++.++++++++++.++++|+||++..|+++++..|+++++++..... .+. .++...
T Consensus 143 ~~~~~~~~~~~~~~~v~~~l~~~~~~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~---------~~~---~~~~~~ 210 (272)
T 3ch0_A 143 GDNIDHPNIALFCDLVVAEIKKAHITDRFTLQSFDVRALEYMHSQYPDIKLSYLVETKG---------TLK---KQLEKL 210 (272)
T ss_dssp GBTTTBCCHHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCTTSEEEEEECSSC---------CHH---HHHTTS
T ss_pred cccccCccHHHHHHHHHHHHHHcCCCCcEEEEeCCHHHHHHHHHHCCCCcEEEEecCCC---------CHH---HHHHHc
Confidence 10 00001235788999999999999999999999999999999999999999986421 122 345566
Q ss_pred CC--cEEEcCCccccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHHHH
Q 040734 271 GL--QGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEIT 332 (361)
Q Consensus 271 ~~--~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~ 332 (361)
++ .++++++..+ ++++|+.+|++|+.|++| |||+++++.+++ ++|||||+||+|+.+.
T Consensus 211 ~~~~~~i~~~~~~~--~~~~v~~~~~~Gl~v~~w-Tvn~~~~~~~l~-~~GvdgIiTD~P~~~~ 270 (272)
T 3ch0_A 211 SFTPAVYSPDVTLV--SKKDIDAAHKLGMRVIPW-TVNTKEEIETLI-SLGVDGIITDYPDLFF 270 (272)
T ss_dssp SSCCSEEEEBGGGC--CHHHHHHHHHTTCEECCB-CCCSHHHHHHHH-HHTCSEEEESCGGGGT
T ss_pred CCCCcEEccchhhc--CHHHHHHHHHcCCEEEEe-ccCCHHHHHHHH-HcCCCEEEeCCHHHHh
Confidence 66 7888877654 899999999999999999 999999999987 6999999999999864
No 9
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=100.00 E-value=2.7e-52 Score=384.51 Aligned_cols=234 Identities=16% Similarity=0.155 Sum_probs=204.4
Q ss_pred ceEEEecCCCCCCCCcchhhhcccccchHHHHHHHHhCCCCEEEEeeeeecCCcEEEEcCCCcccccCCccccccccccC
Q 040734 47 FLVVGHRGHGMNVLQSSDKRMQAIKENSIASFNSSAKYPLDFIEFDVQVTKDGWPVIFHDDVIVSEDNGTIFEKRITELS 126 (361)
Q Consensus 47 ~~iiaHRG~~~~~~~~~~~~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~g~~~~~~v~d~t 126 (361)
|+||||||+++ .+||||++||++|++.|+|+||+|||+||||++||+||.+++|+|+|. +.|.++|
T Consensus 2 ~~iiaHRG~~~-----------~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~Rtt~~~---g~v~~~t 67 (248)
T 1zcc_A 2 TKIVSHRGANR-----------FAPENTFAAADLALQQGADYIELDVRESADGVLYVIHDETLDRTTNGT---GPVGHML 67 (248)
T ss_dssp CEEEETTTTTT-----------TSCSSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSSBTTTTSSCC---SBSTTSC
T ss_pred CeEEECCCCCC-----------CCCchHHHHHHHHHHcCCCEEEEEeeEcCCCCEEEECCCccccccCCC---cchhhCC
Confidence 68999999987 799999999999999999999999999999999999999999999998 9999999
Q ss_pred HHHHhccCCccccccccccccccccCCcccccccccCCcccCHHHHHHhCCC-CceEEEEEecCCccchhhhHHHHHHHH
Q 040734 127 LSEFLSYGPQREQGKIGKSLLRKTKDGKILHWNVEIDDSLCTLQEAFQQVDP-NVGFNVELKFDDHIVYEQDYLIRVIQA 205 (361)
Q Consensus 127 ~~eL~~l~~~~d~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~EvL~~~~~-~~~l~iEiK~~~~~~~~~~~~~~~v~~ 205 (361)
|+||+++ ++|+| ++||||+|+|++++. ++.++||+|.+....+ .+++.
T Consensus 68 ~~eL~~l----~~g~~---------------------~~iptL~evl~~~~~~~~~l~iEiK~~~~~~~------~~~~~ 116 (248)
T 1zcc_A 68 SSEIDTL----DAGGW---------------------FDDRFKGAIVPRLDAYLEHLRGRAGVYIELKY------CDPAK 116 (248)
T ss_dssp HHHHTTS----CSSTT---------------------TCGGGTTCCCCBHHHHHHHHTTTCEEEEEEEE------SCHHH
T ss_pred HHHHHhC----CCCCC---------------------CCCCCHHHHHHHHHhcCcEEEEEeCCCCCccc------HHHHH
Confidence 9999999 44432 489999999999985 6899999997642111 14678
Q ss_pred HHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccC-
Q 040734 206 ILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFR- 284 (361)
Q Consensus 206 vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~- 284 (361)
++++++++++.++++++||++..++.+++..|+++++++..... . ...+++..++.++++++. .+
T Consensus 117 v~~~l~~~~~~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~---------~---~~~~~~~~~~~~i~~~~~--~~~ 182 (248)
T 1zcc_A 117 VAALVRHLGMVRDTFYFSFSEEMRQGLQSIAPEFRRMMTLDIAK---------S---PSLVGAVHHASIIEITPA--QMR 182 (248)
T ss_dssp HHHHHHHHTCSTTEEEECSCHHHHHHHHHHCTTSEEEEEHHHHS---------S---THHHHHTTCCSEEEECHH--HHH
T ss_pred HHHHHHHhCCCCCEEEEECCHHHHHHHHHHCCCCcEEEEecCCc---------c---HHHHHHHcCCCEEEecHH--HhC
Confidence 89999999999999999999999999999999999999875321 0 125667788999988765 35
Q ss_pred ChHHHHHHHHcCCEEEEeccCCCHHHHHH-HHHhcCccEEEeCChHHHHHHHHHhcCC
Q 040734 285 NPGAVTKIKESKLSLLTYGRLNNVAEAVY-MQHLMGIDGVIVDLVQEITEAVYDMIKP 341 (361)
Q Consensus 285 ~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~-~~~~~GVdgI~TD~p~~~~~~l~~~~~~ 341 (361)
++++++.+|++|+.|++| |+|+++++.+ ++ ++|||||+||+|+.+.++++....|
T Consensus 183 ~~~~v~~~~~~G~~v~~w-Tvn~~~~~~~~l~-~~GvdgIiTD~p~~~~~~~~~~~~~ 238 (248)
T 1zcc_A 183 RPGIIEASRKAGLEIMVY-YGGDDMAVHREIA-TSDVDYINLDRPDLFAAVRSGMAEL 238 (248)
T ss_dssp SHHHHHHHHHHTCEEEEE-CCCCCHHHHHHHH-HSSCSEEEESCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEE-CCCCHHHHHHHHH-HcCCCEEEECCHHHHHHHHHHhcch
Confidence 899999999999999999 9999999999 86 7999999999999999998865443
No 10
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=100.00 E-value=3.9e-50 Score=367.83 Aligned_cols=233 Identities=21% Similarity=0.222 Sum_probs=200.6
Q ss_pred CcceEEEecCCCCCCCCcchhhhcccccchHHHHHHHHhCCCCEEEEeeeeecCCcEEEEcCCCcccccCCccccccccc
Q 040734 45 PKFLVVGHRGHGMNVLQSSDKRMQAIKENSIASFNSSAKYPLDFIEFDVQVTKDGWPVIFHDDVIVSEDNGTIFEKRITE 124 (361)
Q Consensus 45 ~~~~iiaHRG~~~~~~~~~~~~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~g~~~~~~v~d 124 (361)
++|+||||||++.. +.+||||++||+.|++.|+|+||+|||+|+||++||+||.+++| +.|.+
T Consensus 3 ~~~~iiaHRG~~~~---------~~~pENTl~Af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~~--------~~v~~ 65 (238)
T 3no3_A 3 DNTKVIAHRGYWKT---------EGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQG--------KHIQS 65 (238)
T ss_dssp CCCEEEETTSSCSS---------TTCCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSEETT--------EEGGG
T ss_pred CCCeEEeCCCCCCC---------CCCCccHHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCCCCCC--------CChHh
Confidence 57899999999411 16999999999999999999999999999999999999999974 67999
Q ss_pred cCHHHHhccCCccccccccccccccccCCcccccccccCCcccCHHHHHHhCCC--CceEEEEEecCCccchhhhHHHHH
Q 040734 125 LSLSEFLSYGPQREQGKIGKSLLRKTKDGKILHWNVEIDDSLCTLQEAFQQVDP--NVGFNVELKFDDHIVYEQDYLIRV 202 (361)
Q Consensus 125 ~t~~eL~~l~~~~d~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~EvL~~~~~--~~~l~iEiK~~~~~~~~~~~~~~~ 202 (361)
+||+||+++. +| .+++||||+|+|++++. ++.++||||.+... .....+
T Consensus 66 ~t~~el~~l~----~~---------------------~~~~iptL~evl~~~~~~~~~~l~iEiK~~~~~----~~~~~~ 116 (238)
T 3no3_A 66 CTYDELKDLQ----LS---------------------NGEKLPTLEQYLKRAKKLKNIRLIFELKSHDTP----ERNRDA 116 (238)
T ss_dssp SCHHHHTTCB----CT---------------------TSCBCCBHHHHHHHHHHCTTCEEEEEECCCSSH----HHHHHH
T ss_pred CCHHHHhhCC----CC---------------------CCCcCCcHHHHHHHHhhcCCceEEEEeCCCCCc----chhHHH
Confidence 9999999983 22 45789999999999973 69999999987531 112357
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccc
Q 040734 203 IQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGV 282 (361)
Q Consensus 203 v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~ 282 (361)
++.++++++++++.++++++||++..|+++++..|+++++++..... . ..++..++.++++++..+
T Consensus 117 ~~~v~~~l~~~~~~~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~~----------~----~~~~~~~~~~~~~~~~~~ 182 (238)
T 3no3_A 117 ARLSVQMVKRMKLAKRTDYISFNMDACKEFIRLCPKSEVSYLNGELS----------P----MELKELGFTGLDYHYKVL 182 (238)
T ss_dssp HHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCTTSCEEECSSCSC----------H----HHHHHTTCCEEEEEHHHH
T ss_pred HHHHHHHHHHcCCcCCEEEEECCHHHHHHHHHHCCCCeEEEEeCCCC----------H----HHHHHCCCceEeccHHhh
Confidence 88999999999999999999999999999999999999999875321 1 235567888888776654
Q ss_pred cCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHHHHHHHHHhc
Q 040734 283 FRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEITEAVYDMI 339 (361)
Q Consensus 283 ~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~~l~~~~ 339 (361)
..++++|+.+|++|+.|++| |||+++++++++ ++|||||+||+|+.+.+++++++
T Consensus 183 ~~~~~~v~~~~~~G~~v~~W-TVn~~~~~~~l~-~~GVdgIiTD~P~~~~~~l~~r~ 237 (238)
T 3no3_A 183 QSHPDWVKDCKVLGMTSNVW-TVDDPKLMEEMI-DMGVDFITTDLPEETQKILHSRA 237 (238)
T ss_dssp HHSTTHHHHHHHTTCEEEEE-CCCSHHHHHHHH-HHTCSEEEESCHHHHHHHHHHHT
T ss_pred hCCHHHHHHHHHCCCEEEEE-CCCCHHHHHHHH-HcCCCEEECCCHHHHHHHHHhcc
Confidence 45889999999999999999 999999999997 69999999999999999998864
No 11
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=100.00 E-value=1.6e-48 Score=366.78 Aligned_cols=241 Identities=17% Similarity=0.215 Sum_probs=199.4
Q ss_pred CCCCcceEEEecCCCCCCCCcchhhhcccccchHHHHHHHHhCCCCEEEEeeeeecCCcEEEEcCCCcccccCCcccccc
Q 040734 42 FRIPKFLVVGHRGHGMNVLQSSDKRMQAIKENSIASFNSSAKYPLDFIEFDVQVTKDGWPVIFHDDVIVSEDNGTIFEKR 121 (361)
Q Consensus 42 ~~~~~~~iiaHRG~~~~~~~~~~~~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~g~~~~~~ 121 (361)
.....|+||||||+++. .+||||++||+.|++.|+|+||+|||+|+||++||+||.+++|+|+|. +.
T Consensus 27 ~~~~~~~iiaHRG~~~~----------~~pENTl~af~~A~~~g~d~iE~Dv~~TkDg~~Vv~HD~~l~rtt~~~---g~ 93 (292)
T 3mz2_A 27 ADDRIPLISGHRGGRGK----------GYPENSMETFENTLSYTPATFEIDPRLTKDSVIVLFHDDTLERTSNGT---GK 93 (292)
T ss_dssp CTTCCCEEEEGGGCCBT----------TBCTTCHHHHHHHHHHCCCEEEECEEECTTCCEEECCSSSSTTTBSCC---SC
T ss_pred CCCCCCEEEECCCCCCC----------CCCccHHHHHHHHHHcCCCEEEEEEeECCCCcEEEECCchhcccCCCC---Cc
Confidence 34567999999998641 589999999999999999999999999999999999999999999998 99
Q ss_pred ccccCHHHHhccCCccccccccccccccccCCcccccccccCCcccCHHHHHHhCCCCceEEEEEecCCccchhhhHHHH
Q 040734 122 ITELSLSEFLSYGPQREQGKIGKSLLRKTKDGKILHWNVEIDDSLCTLQEAFQQVDPNVGFNVELKFDDHIVYEQDYLIR 201 (361)
Q Consensus 122 v~d~t~~eL~~l~~~~d~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~EvL~~~~~~~~l~iEiK~~~~~~~~~~~~~~ 201 (361)
|.++||+||+++. +|.+.. .+.+++||||+|+|+++++++.++||+|...
T Consensus 94 v~~~t~~el~~l~----~~~~~~---------------~~~~~~iptL~evl~~~~~~~~l~iE~K~~~----------- 143 (292)
T 3mz2_A 94 VSDYTWEELQNFR----LKDPEG---------------NITNYRIPTLEEAIRWARGKTILILDKKDVP----------- 143 (292)
T ss_dssp GGGSCHHHHTTSC----BBCTTC---------------CBCSCCCCBHHHHHHHHTTTCCEEECCSSSC-----------
T ss_pred hhhCcHHHHhcCC----CCCCCC---------------ccCCcCCCCHHHHHHHhCCCcEEEEEECCCc-----------
Confidence 9999999999994 443211 1356899999999999988889999999752
Q ss_pred HHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCC------cEE
Q 040734 202 VIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGL------QGI 275 (361)
Q Consensus 202 ~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~------~~i 275 (361)
.+.++++++++++.++++++||+++.++.+++..|+++++++.... ..... ....++ ..+
T Consensus 144 -~~~v~~~l~~~~~~~~vii~Sf~~~~l~~~~~~~p~~~~~~l~~~~------------~~l~~-~~~~g~~~~~~~~~~ 209 (292)
T 3mz2_A 144 -MERTAQLITDMQAEPYVMITVHDGASARFFYEKNPNFMFEAFVKTK------------EAVQD-YEDNGIPWSHIMAYV 209 (292)
T ss_dssp -HHHHHHHHHHTTCTTTEEEEESSHHHHHHHHHHCTTCCEEEECCSH------------HHHHH-HHHTTCCGGGEEEEE
T ss_pred -HHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHHCCCCeEEEEeCCH------------HHHHH-HHHhCCChhheeeee
Confidence 3578889999999999999999999999999999999999987421 11112 223333 234
Q ss_pred EcCCccccCChHHHHHHHHcCCEEEEeccCCCH----------HHHHHHHHhcCccEEEeCChHHHHHHHHHhcCCcc
Q 040734 276 VSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNV----------AEAVYMQHLMGIDGVIVDLVQEITEAVYDMIKPAK 343 (361)
Q Consensus 276 ~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~----------~~~~~~~~~~GVdgI~TD~p~~~~~~l~~~~~~~~ 343 (361)
++.+.. .++++|+.+|++|++|++| |+|+. ++|.+++ .+|||||+||+|+.+.++++.......
T Consensus 210 ~~~~~~--~~~~~V~~ah~~G~~V~vW-Tv~t~d~~~~~~~~~~~~~~L~-~~GVDgIiTD~P~~l~~~L~~~~~~~~ 283 (292)
T 3mz2_A 210 GPKITP--EVREVIDMLHERGVMCMIS-TAPSDDKLSTPESRAEAYRMII-RQGVDIIESDRPIEVAEAISSLIPVSS 283 (292)
T ss_dssp ESSCCH--HHHHHHHHHHHTTBCEEEE-CTTTGGGSSSHHHHHHHHHHHH-HTTCCEEEESCHHHHHHHHGGGSCSSC
T ss_pred cccccc--cCHHHHHHHHHCCCEEEEE-eCCCcchhhhccccHHHHHHHH-HcCCCEEEeCCHHHHHHHHHHhccCcc
Confidence 444443 4789999999999999999 99884 4788887 699999999999999999988754433
No 12
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=100.00 E-value=2.7e-49 Score=361.36 Aligned_cols=218 Identities=22% Similarity=0.304 Sum_probs=186.5
Q ss_pred CcceEEEecCCCCCCCCcchhhhcccccchHHHHHHHHhCCCCEEEEeeeeecCCcEEEEcCCCcccccCCccccccccc
Q 040734 45 PKFLVVGHRGHGMNVLQSSDKRMQAIKENSIASFNSSAKYPLDFIEFDVQVTKDGWPVIFHDDVIVSEDNGTIFEKRITE 124 (361)
Q Consensus 45 ~~~~iiaHRG~~~~~~~~~~~~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~g~~~~~~v~d 124 (361)
....||||||+++ .+||||++||++|++.|+|+||+|||+||||++||+||.+++|+|+|. +.|.+
T Consensus 11 ~~~~iiaHRG~~~-----------~~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~~~---g~v~d 76 (234)
T 1o1z_A 11 HHVIVLGHRGYSA-----------KYLENTLEAFMKAIEAGANGVELDVRLSKDGKVVVSHDEDLKRLFGLD---VKIRD 76 (234)
T ss_dssp CCCEEEEETTTTT-----------TSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSEEHHHHCEE---EEGGG
T ss_pred ceEEEEEcCCCCC-----------CCCCchHHHHHHHHHcCCCEEEEEeeEecCCCEEEEcCCcHHhcCCcC---cCccc
Confidence 3568999999998 799999999999999999999999999999999999999999999998 99999
Q ss_pred cCHHHHhccCCccccccccccccccccCCcccccccccCCcccCHHHHHHhCCCCceEEEEEecCCccchhhhHHHHHHH
Q 040734 125 LSLSEFLSYGPQREQGKIGKSLLRKTKDGKILHWNVEIDDSLCTLQEAFQQVDPNVGFNVELKFDDHIVYEQDYLIRVIQ 204 (361)
Q Consensus 125 ~t~~eL~~l~~~~d~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~EvL~~~~~~~~l~iEiK~~~~~~~~~~~~~~~v~ 204 (361)
+||+||++++ +++||||+|+|++++.++.++||+|.+ .+++
T Consensus 77 ~T~~eL~~l~----------------------------~~~iptL~evL~~~~~~~~l~iEiK~~-----------~~~~ 117 (234)
T 1o1z_A 77 ATVSELKELT----------------------------DGKITTLKEVFENVSDDKIINIEIKER-----------EAAD 117 (234)
T ss_dssp SCHHHHHHHT----------------------------TTCCCBHHHHHHHSCTTSEEEEEECCG-----------GGHH
T ss_pred CcHHHHhcCC----------------------------CCCCCCHHHHHHhcccCCeEEEEeCCc-----------cHHH
Confidence 9999999982 478999999999999779999999964 2456
Q ss_pred HHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcC---CcEEEcCCcc
Q 040734 205 AILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGG---LQGIVSEVKG 281 (361)
Q Consensus 205 ~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~---~~~i~~~~~~ 281 (361)
.+++++++ .++++++||+ ++.+++..|+++++++...... ..+. .++...+ +.++++++..
T Consensus 118 ~v~~~l~~---~~~vii~Sf~---l~~~~~~~p~~~~~~l~~~~~~-------~~~~---~~~~~~~~~~~~~i~~~~~~ 181 (234)
T 1o1z_A 118 AVLEISKK---RKNLIFSSFD---LDLLDEKFKGTKYGYLIDEENY-------GSIE---NFVERVEKERPYSLHVPYQA 181 (234)
T ss_dssp HHHHHHTT---CCSEEEEESC---HHHHHHHCTTSCEEEECCTTTT-------CSHH---HHHHHHHHHCCSEEEEEGGG
T ss_pred HHHHHHhc---cCCEEEEchh---HHHHHhhCCCCcEEEEeccccc-------cCHH---HHHHHcCCCCCCEEEeCHHH
Confidence 77888876 6899999999 8999999999999999865221 0111 2233333 3788877664
Q ss_pred ccCC--hHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHHHHHH
Q 040734 282 VFRN--PGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEITEA 334 (361)
Q Consensus 282 ~~~~--~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~~ 334 (361)
+-.+ +++++.+|++|+.|++| |+|+++++.+++ ++ ||||+||+|+.++++
T Consensus 182 ~g~~~~~~~v~~~~~~G~~v~~w-Tvn~~~~~~~l~-~~-vdgIiTD~P~~~~~~ 233 (234)
T 1o1z_A 182 FELEYAVEVLRSFRKKGIVIFVW-TLNDPEIYRKIR-RE-IDGVITDEVELFVKL 233 (234)
T ss_dssp GGSHHHHHHHHHHHHTTCEEEEE-SCCCHHHHHHHG-GG-CSEEEESCHHHHHHT
T ss_pred hcCCccHHHHHHHHHcCCEEEEe-CCCCHHHHHHHH-Hh-CCEEEcCCHHHHhhc
Confidence 3115 89999999999999999 999999999997 79 999999999998875
No 13
>1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A
Probab=100.00 E-value=7.8e-49 Score=379.50 Aligned_cols=270 Identities=17% Similarity=0.212 Sum_probs=198.7
Q ss_pred chhhhhccCCCCCCCCcceEEEecCCCCCCCCcchhhhcccccchHHHHHHHHhCCCCEEEEeeeeecCCcEEEEcCCCc
Q 040734 30 FSSCLEMNKSASFRIPKFLVVGHRGHGMNVLQSSDKRMQAIKENSIASFNSSAKYPLDFIEFDVQVTKDGWPVIFHDDVI 109 (361)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~iiaHRG~~~~~~~~~~~~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l 109 (361)
+.+|...+.+ ..+|+||||||+++ .+||||++||++|++.|+|+||+|||+||||++||+||.+|
T Consensus 18 ~~~c~~~~~~----~~~~~iiaHRG~~~-----------~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l 82 (356)
T 1ydy_A 18 VMGSSAMAAD----SNEKIVIAHRGASG-----------YLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYL 82 (356)
T ss_dssp ---------------CCCEEEETTTTTT-----------TSSTTCHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSBC
T ss_pred hhhhhhcccc----CCCceEEEeCCCCC-----------CCCcchHHHHHHHHHcCCCEEEeeeEECCCCcEEEeCCChH
Confidence 5678655554 45789999999998 79999999999999999999999999999999999999999
Q ss_pred ccccC------------CccccccccccCHHHHhccCCccccccccccccccccCCcc---cccc---cccCCcccCHHH
Q 040734 110 VSEDN------------GTIFEKRITELSLSEFLSYGPQREQGKIGKSLLRKTKDGKI---LHWN---VEIDDSLCTLQE 171 (361)
Q Consensus 110 ~r~t~------------g~~~~~~v~d~t~~eL~~l~~~~d~g~~~~~~~~~~~~g~~---~~~~---~~~~~~iptL~E 171 (361)
+|+|| |. +.|.++||+||++| ++|.|+.+. +|+. ++.+ ...+++||||+|
T Consensus 83 ~rtt~~~~~f~~~~~~~g~---~~v~d~T~~eL~~l----~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~iptL~e 150 (356)
T 1ydy_A 83 DRVTDVADRFPDRARKDGR---YYAIDFTLDEIKSL----KFTEGFDIE-----NGKKVQTYPGRFPMGKSDFRVHTFEE 150 (356)
T ss_dssp TTTBSHHHHSTTCCCTTSC---CBGGGSCHHHHHHS----CBCSCEEEE-----TTEEEESSTTSSCTTCSCCCCCBHHH
T ss_pred HhhcCcccccccccccCCC---cchhhCcHHHHHhC----CCCcccccc-----ccccccccccccccccCCCcCCCHHH
Confidence 99998 55 78999999999999 678776431 1100 0000 124689999999
Q ss_pred HHHhCC-------CCceEEEEEecCCccchhhhHHHHHHHHHHHHHHHhcC---CCCEEEEcCCHHHHHHHHHH-----C
Q 040734 172 AFQQVD-------PNVGFNVELKFDDHIVYEQDYLIRVIQAILKIVFEFAE---NRPIIFSTFQPDAAVLIRKL-----Q 236 (361)
Q Consensus 172 vL~~~~-------~~~~l~iEiK~~~~~~~~~~~~~~~v~~vl~~l~~~~~---~~rv~~~Sf~~~~l~~l~~~-----~ 236 (361)
+|++++ .++.++||||.+...... ...+++.++++++++++ .++++++||++..|+++++. .
T Consensus 151 vl~~~~~~~~~~~~~~~l~iEiK~~~~~~~~---~~~~~~~v~~~l~~~~~~~~~~~v~i~SF~~~~l~~~~~~~~p~~~ 227 (356)
T 1ydy_A 151 EIEFVQGLNHSTGKNIGIYPEIKAPWFHHQE---GKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMG 227 (356)
T ss_dssp HHHHHHHHHHHHSCCCEEEEEECCHHHHHHT---TCCHHHHHHHHHHHTTCCSTTSSBEEEESCHHHHHHHHHTHHHHHT
T ss_pred HHHHHHHhhhcccCCceEEEeecCccccccc---chhHHHHHHHHHHHcCCCCCCCCEEEEcCCHHHHHHHHhhcccccC
Confidence 999986 368999999975311000 01367889999999987 57999999999999999998 7
Q ss_pred CCCCEEEEccCCCcc---------------cccc-ccccHHHHHHHHHhcCCcEEEcCCcccc---------CChHHHHH
Q 040734 237 STYPVFFLTNGGTEI---------------FYDV-RRNSLEEAVKVCLEGGLQGIVSEVKGVF---------RNPGAVTK 291 (361)
Q Consensus 237 p~~~~~~l~~~~~~~---------------~~d~-~~~~l~~~~~~~~~~~~~~i~~~~~~~~---------~~~~~v~~ 291 (361)
|++++++++...... +... ....+. .+ ...+.++++++..+. .++++|+.
T Consensus 228 p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~--~~~a~~i~p~~~~~~~~~~~~~~~~~~~~v~~ 302 (356)
T 1ydy_A 228 MELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMK---QV--AEYADGIGPDYHMLIEETSQPGNIKLTGMVQD 302 (356)
T ss_dssp CCCEEEEEECCGGGCCCEEECTTSCEEECCCGGGGSTTHHH---HH--TTTCSEEEEBGGGTBCTTCBTTBCCBCSHHHH
T ss_pred CCceEEEEeccCcccccccccccccccccchhhhcchhhHH---HH--HhhCeEEccCHHHhccccccccccCCHHHHHH
Confidence 999999987542100 0000 001111 11 223567777765432 24899999
Q ss_pred HHHcCCEEEEeccCCC---------HHHH-HHHHHhcCccEEEeCChHHHHHHH
Q 040734 292 IKESKLSLLTYGRLNN---------VAEA-VYMQHLMGIDGVIVDLVQEITEAV 335 (361)
Q Consensus 292 ~~~~Gl~v~~w~Tvn~---------~~~~-~~~~~~~GVdgI~TD~p~~~~~~l 335 (361)
+|++|+.|++| |||+ ++++ ++++..+||||||||+|+.+.+++
T Consensus 303 ah~~Gl~V~~W-Tvn~~~l~~~~~d~~~~~~~~l~~~GVDgIiTD~P~~~~~~l 355 (356)
T 1ydy_A 303 AQQNKLVVHPY-TVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFL 355 (356)
T ss_dssp HHHTTCEECCB-CBCTTSCCTTCSSHHHHHHHHHTTSCCSEEEESCHHHHHHHH
T ss_pred HHHCCCEEEEE-EECcccccccccCHHHHHHHHHHHcCCCEEEeCCHHHHHHhh
Confidence 99999999999 9986 4777 543336999999999999998876
No 14
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=100.00 E-value=3.5e-48 Score=351.79 Aligned_cols=215 Identities=24% Similarity=0.305 Sum_probs=187.8
Q ss_pred CcceEEEecCCCCCCCCcchhhhcccccchHHHHHHHHhCCCCEEEEeeeeecCCcEEEEcCCCcccccCCccccccccc
Q 040734 45 PKFLVVGHRGHGMNVLQSSDKRMQAIKENSIASFNSSAKYPLDFIEFDVQVTKDGWPVIFHDDVIVSEDNGTIFEKRITE 124 (361)
Q Consensus 45 ~~~~iiaHRG~~~~~~~~~~~~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~g~~~~~~v~d 124 (361)
+.|++|||||+++ .+||||++||++|++.|+|+||+|||+|+||++||+||.+++ . |.|.+
T Consensus 6 ~~~~iiaHRG~~~-----------~~PENTl~Af~~A~~~G~d~iE~DV~lT~Dg~lVv~HD~~l~-----~---g~v~~ 66 (224)
T 1vd6_A 6 QRPLRLGHRGAPL-----------KAKENTLESFRLALEAGLDGVELDVWPTRDGVFAVRHDPDTP-----L---GPVFQ 66 (224)
T ss_dssp -CCEEEEETSCTT-----------TSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSCSEET-----T---EEGGG
T ss_pred CCceEEECCCCCC-----------CCCcchHHHHHHHHHcCCCEEEEEeeEecCCcEEEECCCccC-----C---CChhh
Confidence 4679999999987 799999999999999999999999999999999999999997 2 78999
Q ss_pred cCHHHHhccCCccccccccccccccccCCcccccccccCCcccCHHHHHHhCC--CCceEEEEEecCCccchhhhHHHHH
Q 040734 125 LSLSEFLSYGPQREQGKIGKSLLRKTKDGKILHWNVEIDDSLCTLQEAFQQVD--PNVGFNVELKFDDHIVYEQDYLIRV 202 (361)
Q Consensus 125 ~t~~eL~~l~~~~d~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~EvL~~~~--~~~~l~iEiK~~~~~~~~~~~~~~~ 202 (361)
+||+||++++ ++||||+|+|++++ .++.++||+|.+... + ..+
T Consensus 67 ~t~~eL~~l~-----------------------------~~iptL~evl~~~~~~~~~~l~iEiK~~~~~-~-----~~~ 111 (224)
T 1vd6_A 67 VDYADLKAQE-----------------------------PDLPRLEEVLALKEAFPQAVFNVELKSFPGL-G-----EEA 111 (224)
T ss_dssp SCHHHHHHHS-----------------------------TTCCBHHHHHGGGGTCTTCEEEEEECCCTTS-H-----HHH
T ss_pred CCHHHHHhcC-----------------------------CCCCCHHHHHHhhhccCCceEEEEECCCCCc-c-----HHH
Confidence 9999999981 67999999999998 579999999986532 1 136
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccc
Q 040734 203 IQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGV 282 (361)
Q Consensus 203 v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~ 282 (361)
++.+++++++ .++++++||++..++.+++..|++++++++.... ..+++..++.++++++..+
T Consensus 112 ~~~v~~~l~~---~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~--------------~~~~~~~~~~~i~~~~~~~ 174 (224)
T 1vd6_A 112 ARRLAALLRG---REGVWVSSFDPLALLALRKAAPGLPLGFLMAEDH--------------SALLPCLGVEAVHPHHALV 174 (224)
T ss_dssp HHHHHHHTTT---CSSEEEEESCHHHHHHHHHHCTTSCEEEEESSCC--------------GGGGGGSCCSEEEEBGGGC
T ss_pred HHHHHHHHhc---CCcEEEEeCCHHHHHHHHHHCCCCCEEEEecccc--------------HHHHHHcCCcEEecCcccC
Confidence 7788888876 6799999999999999999999999999886421 1234567888998887754
Q ss_pred cCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHHHHHH
Q 040734 283 FRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEITEA 334 (361)
Q Consensus 283 ~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~~ 334 (361)
++++++.+|++|+.|++| |+|+++++.+++ .+|||||+||+|+.+.++
T Consensus 175 --~~~~v~~~~~~G~~v~~w-tvn~~~~~~~l~-~~GvdgI~TD~p~~~~~~ 222 (224)
T 1vd6_A 175 --TEEAVAGWRKRGLFVVAW-TVNEEGEARRLL-ALGLDGLIGDRPEVLLPL 222 (224)
T ss_dssp --CHHHHHHHHHTTCEEEEE-CCCCHHHHHHHH-HTTCSEEEESCHHHHTTS
T ss_pred --CHHHHHHHHHCCCEEEEE-eCCCHHHHHHHH-hcCCCEEEcCCHHHHHHh
Confidence 899999999999999999 999999999997 799999999999988654
No 15
>3i10_A Putative glycerophosphoryl diester phosphodiester; NP_812074.1; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=5.9e-45 Score=339.58 Aligned_cols=245 Identities=17% Similarity=0.155 Sum_probs=196.5
Q ss_pred CCCcceEEEecCCCCCCCCcchhhhcccccchHHHHHHHHhCCCCEEEEeeeeecCCcEEEEcCCCcccccCCccccccc
Q 040734 43 RIPKFLVVGHRGHGMNVLQSSDKRMQAIKENSIASFNSSAKYPLDFIEFDVQVTKDGWPVIFHDDVIVSEDNGTIFEKRI 122 (361)
Q Consensus 43 ~~~~~~iiaHRG~~~~~~~~~~~~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~g~~~~~~v 122 (361)
..++++||||||+++ .+||||++||++|++.|+|+||+|||+|+||++||+||.+++|+|+|. +.|
T Consensus 14 ~~~~~~iiaHRG~~~-----------~~pENTl~af~~A~~~g~d~iE~Dv~~TkDg~~vv~HD~~l~r~t~~~---g~v 79 (278)
T 3i10_A 14 KSNKVLVVAHRGNWR-----------SAPENSTAAIDSAIAMKVDIVEIDIQKTKDGQLILMHDNTLDRTTTGK---GEI 79 (278)
T ss_dssp TCCSCEEEEETSCTT-----------TSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSBSTTTBSCC---SBG
T ss_pred CCCCCEEEECCCCCC-----------CCCccHHHHHHHHHHcCCCEEEEEEEECCCCeEEEecCcchhhcCCCC---cee
Confidence 345789999999987 799999999999999999999999999999999999999999999998 999
Q ss_pred cccCHHHHhccCCccccccccccccccccCCcccccccccCCcccCHHHHHHhCCCCceEEEEEecCCccchhhhHHHHH
Q 040734 123 TELSLSEFLSYGPQREQGKIGKSLLRKTKDGKILHWNVEIDDSLCTLQEAFQQVDPNVGFNVELKFDDHIVYEQDYLIRV 202 (361)
Q Consensus 123 ~d~t~~eL~~l~~~~d~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~EvL~~~~~~~~l~iEiK~~~~~~~~~~~~~~~ 202 (361)
.++||+||+++ ++|.|+. ...+++||||+|+|++++.++.++||.+. .+
T Consensus 80 ~~~t~~el~~l----~~~~~~~---------------~~~~~~iptL~evl~~~~~~~~~nie~~~------------~~ 128 (278)
T 3i10_A 80 KNWTLADIKKL----KLKDKDG---------------KVTNYVVPTLEEALLTAKGKIMVNLDKAY------------DI 128 (278)
T ss_dssp GGSCHHHHTTS----CBBCTTS---------------CBCSCCCCBHHHHHHHHTTTSEEEEESCG------------GG
T ss_pred ecCcHHHHhcC----CCCCCCc---------------ccCCCCCCCHHHHHHHhcCCeEEEEecCc------------hH
Confidence 99999999999 4555432 13578999999999999988889998421 35
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccc
Q 040734 203 IQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGV 282 (361)
Q Consensus 203 v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~ 282 (361)
++.++++++++++.++++++|+ ..++.+++..|+++.++++...- .........+..+++...+..++.+.+...
T Consensus 129 ~~~v~~~l~~~~~~~~v~i~s~--~~l~~~~~~~p~~~~~~l~~p~i---~~~~~~~~~~i~~~~~~~~p~~~~~~~~~~ 203 (278)
T 3i10_A 129 FDDVYAILEKTETQNQVIMKGG--QPIETVKREFGSYLDKVLYMPVI---DLGNKEAEKIITDYLKELRPAAFEIIYSDP 203 (278)
T ss_dssp HHHHHHHHHHHTCGGGEEEEES--SCHHHHHHHHGGGTTTSEEEEEE---ETTSTTHHHHHHHHHHHTCCSEEEEEBCCT
T ss_pred HHHHHHHHHHcCCCCeEEEEEh--HHHHHHHHHCcCCccceEEEeee---cccccchHHHHHHHHHhcCceEEEEeecCC
Confidence 7889999999999999999994 45888899888876655543210 000112234455666677776665544432
Q ss_pred -cCChHHHHHHHHcCCEEEEecc--------------CCCHH-HHHHHHHhc-CccEEEeCChHHHHHHHHHhc
Q 040734 283 -FRNPGAVTKIKESKLSLLTYGR--------------LNNVA-EAVYMQHLM-GIDGVIVDLVQEITEAVYDMI 339 (361)
Q Consensus 283 -~~~~~~v~~~~~~Gl~v~~w~T--------------vn~~~-~~~~~~~~~-GVdgI~TD~p~~~~~~l~~~~ 339 (361)
...+++++.+|++|++|++| | ++++. .|.+++ .+ |||+|+||+|..+.+|++.+.
T Consensus 204 ~~~~~~~v~~~~~~g~~v~~n-Tlw~~~~~g~~d~~a~~d~~~~~~~l~-~~~Gvd~I~TD~P~~l~~yL~~~~ 275 (278)
T 3i10_A 204 KNPLPPKIKQLLFKKSLIWYN-TLWGSLAGNHDDNLALTDPEKSYGYLI-EQLGARILQTDQPAYLLDYLRKKG 275 (278)
T ss_dssp TCSSHHHHHHHHTTTSEEEEE-CSSGGGBTTCCHHHHHHCHHHHHHHHH-HTTCEEEEEESCHHHHHHHHHHHT
T ss_pred ccchHHHHHHHHHCCCEEEEE-ecccccccCccchhhccChHHHHHHHH-hcCCCCEEEeCCHHHHHHHHhhcc
Confidence 23578999999999999999 7 44554 588887 68 999999999999999998865
No 16
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=100.00 E-value=4e-38 Score=295.52 Aligned_cols=227 Identities=12% Similarity=0.115 Sum_probs=171.8
Q ss_pred Ccc-eEEEecCCCCCCCCcchhhhcccccchHHHHHHHHhCCCCEEEEeeeeecCCcEEEEcCCC---cccccCCccccc
Q 040734 45 PKF-LVVGHRGHGMNVLQSSDKRMQAIKENSIASFNSSAKYPLDFIEFDVQVTKDGWPVIFHDDV---IVSEDNGTIFEK 120 (361)
Q Consensus 45 ~~~-~iiaHRG~~~~~~~~~~~~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~---l~r~t~g~~~~~ 120 (361)
.+| +||||| |||++||++|++.|||+||+|||+ |||++||+||.+ ++|+|+|. +
T Consensus 4 ~~p~~iiaHr------------------ENTl~Af~~A~~~Gad~IE~DV~l-kDG~lVv~HD~~~~~l~Rtt~~~---g 61 (285)
T 1xx1_A 4 RRPIWNLAHM------------------VNAVAQIPDFLDLGANALEADVTF-KGSVPTYTYHGTPCDFGRDCIRW---E 61 (285)
T ss_dssp SEEEEEEESC------------------CCSTTHHHHHHHHTCSEEEEEEEE-ETTEEEEEECCSSCCTTSCSCCE---E
T ss_pred CCCcEEEEeh------------------hccHHHHHHHHHhCCCEEEEEEEE-ECCEEEEEcCCcccccccccCCC---c
Confidence 456 899998 499999999999999999999999 999999999999 99999998 9
Q ss_pred cccccCHHHHhccCCccccccccccccccccCCcccccccccCCcccCHHHHHHhCCCCceEEEEEecCCccchhhh--H
Q 040734 121 RITELSLSEFLSYGPQREQGKIGKSLLRKTKDGKILHWNVEIDDSLCTLQEAFQQVDPNVGFNVELKFDDHIVYEQD--Y 198 (361)
Q Consensus 121 ~v~d~t~~eL~~l~~~~d~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~EvL~~~~~~~~l~iEiK~~~~~~~~~~--~ 198 (361)
.|.++ ++||++|.. |+. |+|++.|+ .++||||.+... +... .
T Consensus 62 ~v~d~-l~eL~~l~~------~~~----------------------~~~~~~L~------~l~iEiK~~~~~-~~~~~~~ 105 (285)
T 1xx1_A 62 YFNVF-LKTLREYTT------PGN----------------------AKYRDGFI------LFVLDLKTGSLS-NDQVRPA 105 (285)
T ss_dssp EHHHH-HHHHHHHTS------TTC----------------------TTCCTTCC------EEEEEECCTTCC-HHHHHHH
T ss_pred cHHHH-HHHHHHccc------CCC----------------------Cccccccc------EEEEecCCCccc-ccccchh
Confidence 99999 999999942 111 23333322 899999987532 1100 0
Q ss_pred HHHHHHHHHHHHHHhcCC----CC----EEEEcCCHHHHHH-HHHH-------CCCCCEEEEccCCCccccccccccHHH
Q 040734 199 LIRVIQAILKIVFEFAEN----RP----IIFSTFQPDAAVL-IRKL-------QSTYPVFFLTNGGTEIFYDVRRNSLEE 262 (361)
Q Consensus 199 ~~~~v~~vl~~l~~~~~~----~r----v~~~Sf~~~~l~~-l~~~-------~p~~~~~~l~~~~~~~~~d~~~~~l~~ 262 (361)
...+++. ++++++.. .+ ++++||++..+.. +++. .|.+++++++.....+ ....+..
T Consensus 106 ~~~~~~~---ll~~~~~~~~~~~~~~~~v~i~SF~~~~l~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~----~~~~~~~ 178 (285)
T 1xx1_A 106 GENVAKE---LLQNYWNNGNNGGRAYVVLSLPDIGHYEFVRGFKEVLKKEGHEDLLEKVGYDFSGPYLP----SLPTLDA 178 (285)
T ss_dssp HHHHHHH---HHHHTSGGGSSCCCCEEEEEESCGGGHHHHHHHHHHHHHTTCGGGGGGEEEEECCCCSS----SCCCHHH
T ss_pred hhhHHHH---HHHHHhhccccccccceeEEEEeCCHHHHHHHHHHHhhhccccCcccceEEeccccccc----chhhHHH
Confidence 0012323 55666654 67 9999999999999 9999 9999999987643100 0012444
Q ss_pred HHHHHHhcCCcEEEcCC----------c-cccCChHHHHHHHHcCC--EEEEeccCCCHHHHHHHHHhcCccEEEeCChH
Q 040734 263 AVKVCLEGGLQGIVSEV----------K-GVFRNPGAVTKIKESKL--SLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQ 329 (361)
Q Consensus 263 ~~~~~~~~~~~~i~~~~----------~-~~~~~~~~v~~~~~~Gl--~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~ 329 (361)
...++...++.+ ++.. . ...+++.+++.+|++|+ +|++| |||+++++++++ .+||||||||+|+
T Consensus 179 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Glg~~V~~W-Tvn~~~~~~~l~-~~GVDgIiTD~P~ 255 (285)
T 1xx1_A 179 THEAYKKAGVDG-HIWLSDGLTNFSPLGDMARLKEAIKSRDSANGFINKIYYW-SVDKVSTTKAAL-DVGVDGIMTNYPN 255 (285)
T ss_dssp HHHHHHHHTCCS-CBEEEECSCCSSHHHHHHHHHHHHHHHTSTTCCCCEEEEE-CCCSHHHHHHHH-HHTCSEEEESCHH
T ss_pred HHHHHHHhCCCC-ccccccccccccccccHHHHhHHHHHHHHhcCCCCeEEEe-eCCCHHHHHHHH-hcCCCEEEeCCHH
Confidence 455666677655 3310 1 11347889999999999 99999 999999999997 6999999999999
Q ss_pred HHHHHHHHhc
Q 040734 330 EITEAVYDMI 339 (361)
Q Consensus 330 ~~~~~l~~~~ 339 (361)
.+.+++++..
T Consensus 256 ~~~~~l~~~~ 265 (285)
T 1xx1_A 256 VLIGVLKESG 265 (285)
T ss_dssp HHHHHHHSTT
T ss_pred HHHHHHhhhc
Confidence 9999988643
No 17
>3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A*
Probab=99.88 E-value=1.2e-21 Score=180.36 Aligned_cols=216 Identities=15% Similarity=0.148 Sum_probs=139.7
Q ss_pred cchHHHHHHHHhCCCCEEEEeeeeecCCcEEEEcCCCc---ccccCCccccccccccCHHHHhccCCccccccccccccc
Q 040734 72 ENSIASFNSSAKYPLDFIEFDVQVTKDGWPVIFHDDVI---VSEDNGTIFEKRITELSLSEFLSYGPQREQGKIGKSLLR 148 (361)
Q Consensus 72 ENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l---~r~t~g~~~~~~v~d~t~~eL~~l~~~~d~g~~~~~~~~ 148 (361)
|||++||+.|++.||++||+||++|+||++|++||... .|. ++. ...+.+ .+++|+++.. .|.
T Consensus 36 vNTl~~~~~a~~~GAn~IE~DV~~~~dg~~v~~hhg~pcdc~r~-C~~--~~~~~~-~l~~lr~~tt---pg~------- 101 (302)
T 3rlg_A 36 VNAIGQIDEFVNLGANSIETDVSFDDNANPEYTYHGIPCDCGRN-CKK--YENFND-FLKGLRSATT---PGN------- 101 (302)
T ss_dssp CCSHHHHHHHHHTTCSEEEEEECBCTTSCBCBCCCCSSCCTTCC-SCC--CCBHHH-HHHHHHHHHS---TTS-------
T ss_pred hhhHHHHHHHHHcCCCEEEEEEEECCCCCEEEEECCCCcchhcc-CCC--CccHHH-HHHHHHHhcC---CCC-------
Confidence 49999999999999999999999999999999999855 232 221 134555 5667766521 110
Q ss_pred cccCCcccccccccCCcccCHHHHHHhCC-CCceEEEEEecCCccchh-hhHHHHHHHHHHHHHHHhc---CCCCEEEEc
Q 040734 149 KTKDGKILHWNVEIDDSLCTLQEAFQQVD-PNVGFNVELKFDDHIVYE-QDYLIRVIQAILKIVFEFA---ENRPIIFST 223 (361)
Q Consensus 149 ~~~~g~~~~~~~~~~~~iptL~EvL~~~~-~~~~l~iEiK~~~~~~~~-~~~~~~~v~~vl~~l~~~~---~~~rv~~~S 223 (361)
+ .++ +=+.+.+|+|.++....+ ......+++++++.+...+ ..-.|++|+
T Consensus 102 ----------------~---------k~~~~l~lv~~DlK~~~l~~~~~~~aG~~la~kLl~~~w~~g~~~~ra~vilsi 156 (302)
T 3rlg_A 102 ----------------S---------KYQEKLVLVVFDLKTGSLYDNQANDAGKKLAKNLLQHYWNNGNNGGRAYIVLSI 156 (302)
T ss_dssp ----------------T---------TCCTTCCEEEEEECGGGSCGGGHHHHHHHHHHHHHHHTSGGGSSCCCCEEEEEE
T ss_pred ----------------C---------ccccceEEEEEEcCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCceeEEEEec
Confidence 0 111 236889999986543222 1223456667777666643 345799999
Q ss_pred CCHHHHHHHHHHC-----CCC-----CEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCC----ccccCChHHH
Q 040734 224 FQPDAAVLIRKLQ-----STY-----PVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEV----KGVFRNPGAV 289 (361)
Q Consensus 224 f~~~~l~~l~~~~-----p~~-----~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~----~~~~~~~~~v 289 (361)
|+.+.++.++... ... .+++-+... ..+....+..+..|+.+..... +.++.....+
T Consensus 157 ~~~~~~~~l~gf~~~l~~~g~~~LldkvG~Dfs~n---------~dl~~i~~~~~~~Gi~~h~wqsDGItnC~~r~~~rl 227 (302)
T 3rlg_A 157 PDLNHYPLIKGFKDQLTKDGHPELMDKVGHDFSGN---------DDIGDVGKAYKKAGITGHIWQSDGITNCLPRGLSRV 227 (302)
T ss_dssp SCGGGTHHHHHHHHHHHHTTCGGGGGGEEEEECSC---------CCHHHHHHHHHHTTCCSCBEEEEECCTTSCCCSHHH
T ss_pred CcchHHHHHHHHHHHHhhcCHHHHhhhcCccccCC---------CCHHHHHHHHHhcCCcCcEEecCCcccceeccHHHH
Confidence 9876655555331 111 133333221 2366666777788875421111 1112333334
Q ss_pred HHHHHc-----C--CEEEEeccCCCHHHHHHHHHhcCccEEEeCChHHHHHHHHH
Q 040734 290 TKIKES-----K--LSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEITEAVYD 337 (361)
Q Consensus 290 ~~~~~~-----G--l~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~~l~~ 337 (361)
+.+.+. | ++|++| |||+++++++++ .+||||||||+|+.+.+++++
T Consensus 228 ~~ai~~RDs~~~~i~~V~vW-TVNd~~~m~~l~-~~GVDGIITD~Pd~l~~~l~~ 280 (302)
T 3rlg_A 228 NAAVANRDSANGFINKVYYW-TVDKRSTTRDAL-DAGVDGIMTNYPDVITDVLNE 280 (302)
T ss_dssp HHHHHHHTSTTCCCSEEEEE-CCCSHHHHHHHH-HTTCSEEEESCHHHHHHHHTS
T ss_pred HHHHHhccCCCCceEEEEEE-eCCCHHHHHHHH-HcCCCEEECCCHHHHHHHHHh
Confidence 433332 3 789999 999999999997 699999999999999999864
No 18
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=96.15 E-value=0.003 Score=64.66 Aligned_cols=41 Identities=15% Similarity=0.164 Sum_probs=38.2
Q ss_pred ccccchHHHHHHHHhCCCCEEEEeeeeecCCcEEEEcCCCc
Q 040734 69 AIKENSIASFNSSAKYPLDFIEFDVQVTKDGWPVIFHDDVI 109 (361)
Q Consensus 69 ~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l 109 (361)
..-+-|.++|..|+..||.+||+|+|=-.||+|||+|..|+
T Consensus 188 l~~~ss~e~y~~aL~~GcRcvElD~wdg~~~ep~v~HG~tl 228 (624)
T 1djx_A 188 LTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPIIYHGYTF 228 (624)
T ss_dssp SSCCBCHHHHHHHHHTTCCEEEEEEECCGGGCCEECCTTSC
T ss_pred ccCCcCHHHHHHHHHhCCcEEEEEeecCCCCCeEEecCCcc
Confidence 45678999999999999999999999988999999999988
No 19
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=95.82 E-value=0.0054 Score=64.51 Aligned_cols=41 Identities=20% Similarity=0.127 Sum_probs=37.6
Q ss_pred ccccchHHHHHHHHhCCCCEEEEeeeeec--CCcEEEEcCCCc
Q 040734 69 AIKENSIASFNSSAKYPLDFIEFDVQVTK--DGWPVIFHDDVI 109 (361)
Q Consensus 69 ~~pENTl~Af~~A~~~Gad~vE~DV~lTk--Dg~~Vv~HD~~l 109 (361)
..-+-|.++|..|+..||.+||+|+|=-. ||+|||+|..|+
T Consensus 336 l~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~ep~v~HG~Tl 378 (799)
T 2zkm_X 336 FSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTM 378 (799)
T ss_dssp SSSCBCTHHHHHHHHTTCCEEEEEEECCCTTCCSCEECCTTSS
T ss_pred ccCcccHHHHHHHHHhCCCEEEEEeecCCCCCCCCEEEeCCcc
Confidence 34567899999999999999999999887 999999999988
No 20
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=95.58 E-value=0.0066 Score=63.82 Aligned_cols=41 Identities=22% Similarity=0.255 Sum_probs=37.7
Q ss_pred ccccchHHHHHHHHhCCCCEEEEeeeeecCCcEEEEcCCCc
Q 040734 69 AIKENSIASFNSSAKYPLDFIEFDVQVTKDGWPVIFHDDVI 109 (361)
Q Consensus 69 ~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l 109 (361)
...+-|.++|..|+..||.+||+|+|=-.||+|||+|..|+
T Consensus 347 l~g~ss~~~y~~aL~~gcRcvEld~wdg~~~ePvv~HG~Tl 387 (816)
T 3qr0_A 347 LTGKSSVEIYRQVLLTGCRCLELDCWDGKDGEPIITHGFTM 387 (816)
T ss_dssp TTSCBCSHHHHHHHHTTCCEEEEEEECCTTSSCEECCTTSS
T ss_pred ccCcccHHHHHHHHHhCCcEEEEEEecCCCCCceEccCCcc
Confidence 34567889999999999999999999999999999999988
No 21
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=94.89 E-value=0.014 Score=61.88 Aligned_cols=40 Identities=18% Similarity=0.235 Sum_probs=36.1
Q ss_pred cccchHHHHHHHHhCCCCEEEEeeeee--cCCcEEEEcCCCc
Q 040734 70 IKENSIASFNSSAKYPLDFIEFDVQVT--KDGWPVIFHDDVI 109 (361)
Q Consensus 70 ~pENTl~Af~~A~~~Gad~vE~DV~lT--kDg~~Vv~HD~~l 109 (361)
.-+-|.++|..|+..||.+||+|+|=- .||+|||+|..|+
T Consensus 341 ~~~ss~~~y~~aL~~gcRcvEld~wdg~~~~~ep~v~hg~t~ 382 (885)
T 3ohm_B 341 AGTSSVEMYRQALLWGCRCVELDVWKGRPPEEEPFITHGFTM 382 (885)
T ss_dssp EECBCSHHHHHHHHTTCCEEEEEEECCCSSSCCCEECSTTSE
T ss_pred cCcCcHHHHHHHHHhCCCEEEEEeeCCCCCCCCCEEeeCCcc
Confidence 455789999999999999999999965 7899999999987
No 22
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=89.91 E-value=0.95 Score=38.90 Aligned_cols=94 Identities=11% Similarity=0.013 Sum_probs=60.8
Q ss_pred cCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCC-hHHHHHHHHcCCEEEE
Q 040734 223 TFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRN-PGAVTKIKESKLSLLT 301 (361)
Q Consensus 223 Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~-~~~v~~~~~~Gl~v~~ 301 (361)
++..+.++.+|+..|+.|+..-.... ......++.+...|++++.++....... .++++.+++.|+++.+
T Consensus 38 ~~g~~~i~~ir~~~~~~~i~~~~~~~---------~~~~~~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v 108 (211)
T 3f4w_A 38 REGVNAIKAIKEKYPHKEVLADAKIM---------DGGHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVV 108 (211)
T ss_dssp HHTTHHHHHHHHHCTTSEEEEEEEEC---------SCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEE
T ss_pred hccHHHHHHHHHhCCCCEEEEEEEec---------cchHHHHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEE
Confidence 45678899999988888874321110 1123335667789999988764321011 5788899999999885
Q ss_pred e-ccCCCH-HHHHHHHHhcCccEEEeC
Q 040734 302 Y-GRLNNV-AEAVYMQHLMGIDGVIVD 326 (361)
Q Consensus 302 w-~Tvn~~-~~~~~~~~~~GVdgI~TD 326 (361)
- .++.++ +.+.++. ..|+|.|.++
T Consensus 109 ~~~~~~t~~~~~~~~~-~~g~d~i~v~ 134 (211)
T 3f4w_A 109 DMICVDDLPARVRLLE-EAGADMLAVH 134 (211)
T ss_dssp ECTTCSSHHHHHHHHH-HHTCCEEEEE
T ss_pred EecCCCCHHHHHHHHH-HcCCCEEEEc
Confidence 2 144454 3355554 6899998875
No 23
>3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A
Probab=89.22 E-value=0.81 Score=42.39 Aligned_cols=37 Identities=11% Similarity=0.084 Sum_probs=30.8
Q ss_pred HHHHHHHHhCCCCEEEEeeeeec-CCcEEEEcCCCccc
Q 040734 75 IASFNSSAKYPLDFIEFDVQVTK-DGWPVIFHDDVIVS 111 (361)
Q Consensus 75 l~Af~~A~~~Gad~vE~DV~lTk-Dg~~Vv~HD~~l~r 111 (361)
...+.+|++.|+.+||+|||-.. .|.+-|+|...+..
T Consensus 45 ~~~i~~qLd~GVR~LELDIw~n~~~g~~~V~Hg~~l~~ 82 (339)
T 3h4x_A 45 YRYFADALDSGAALLELDLWSNALGRSWRVSHSNPLGN 82 (339)
T ss_dssp CSSHHHHHTTCCSEEEEEEESSSSSSSCEECSSSCSSC
T ss_pred cccHHHHHHhCCCEEEEEeecCCCCCCeEEeCCCcccc
Confidence 46788999999999999999875 55799999877643
No 24
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=89.06 E-value=3.4 Score=36.50 Aligned_cols=96 Identities=22% Similarity=0.192 Sum_probs=68.6
Q ss_pred HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccC
Q 040734 226 PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRL 305 (361)
Q Consensus 226 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tv 305 (361)
.+.++.+++..|+.-++.-+- .. .+-.+.+...|+++++.+. .+++.++.+++.|+.++.= +
T Consensus 73 ~e~I~~l~~~~~~~~iGaGTV-----------lt-~~~a~~Ai~AGA~fIvsP~----~~~~vi~~~~~~gi~~ipG--v 134 (232)
T 4e38_A 73 VEAIRLLRQAQPEMLIGAGTI-----------LN-GEQALAAKEAGATFVVSPG----FNPNTVRACQEIGIDIVPG--V 134 (232)
T ss_dssp HHHHHHHHHHCTTCEEEEECC-----------CS-HHHHHHHHHHTCSEEECSS----CCHHHHHHHHHHTCEEECE--E
T ss_pred HHHHHHHHHhCCCCEEeECCc-----------CC-HHHHHHHHHcCCCEEEeCC----CCHHHHHHHHHcCCCEEcC--C
Confidence 457777888888765553221 11 2334567788999998664 2899999999999999774 4
Q ss_pred CCHHHHHHHHHhcCccEEEeCChHHH---HHHHHHhcCC
Q 040734 306 NNVAEAVYMQHLMGIDGVIVDLVQEI---TEAVYDMIKP 341 (361)
Q Consensus 306 n~~~~~~~~~~~~GVdgI~TD~p~~~---~~~l~~~~~~ 341 (361)
.++.++.+.+ ++|+|.|-. +|... .++++.+..|
T Consensus 135 ~TptEi~~A~-~~Gad~vK~-FPa~~~gG~~~lkal~~p 171 (232)
T 4e38_A 135 NNPSTVEAAL-EMGLTTLKF-FPAEASGGISMVKSLVGP 171 (232)
T ss_dssp CSHHHHHHHH-HTTCCEEEE-CSTTTTTHHHHHHHHHTT
T ss_pred CCHHHHHHHH-HcCCCEEEE-CcCccccCHHHHHHHHHH
Confidence 5899998886 699998887 77433 4677776554
No 25
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=88.34 E-value=1.1 Score=45.70 Aligned_cols=72 Identities=10% Similarity=0.181 Sum_probs=52.6
Q ss_pred ccHHHHHHHHHhcCCcEEEcCCcccc-------------CChHHHHHHHHcCCEEEEecc----CCCHH-HHHHHHHhcC
Q 040734 258 NSLEEAVKVCLEGGLQGIVSEVKGVF-------------RNPGAVTKIKESKLSLLTYGR----LNNVA-EAVYMQHLMG 319 (361)
Q Consensus 258 ~~l~~~~~~~~~~~~~~i~~~~~~~~-------------~~~~~v~~~~~~Gl~v~~w~T----vn~~~-~~~~~~~~~G 319 (361)
....+.+.||.++|+.++.++..|.. .-+++++.+|++|+.++.|.. -++.+ .+..+ .++|
T Consensus 309 ~~~k~yIDfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~kgV~i~lw~~~~~~~~~~~~~~~~~-~~~G 387 (641)
T 3a24_A 309 PTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASKNVGIILWAGYHAFERDMENVCRHY-AEMG 387 (641)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHHTTCEEEEEEEHHHHHTSHHHHHHHH-HHHT
T ss_pred HHHHHHHHHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHhcCCEEEEEeeCcchHHHHHHHHHHH-HHcC
Confidence 34677889999999999988766531 126999999999999999921 11222 33344 4799
Q ss_pred ccEEEeCChHH
Q 040734 320 IDGVIVDLVQE 330 (361)
Q Consensus 320 VdgI~TD~p~~ 330 (361)
|+||=+|+.+.
T Consensus 388 v~gvK~Df~~~ 398 (641)
T 3a24_A 388 VKGFKVDFMDR 398 (641)
T ss_dssp CCEEEEECCCC
T ss_pred CCEEEECCCCC
Confidence 99999999753
No 26
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=87.19 E-value=2.1 Score=44.10 Aligned_cols=70 Identities=6% Similarity=-0.013 Sum_probs=49.9
Q ss_pred cHHHHHHHHHhcCCcEEEc---CCcccc-------------------CChHHHHHHHHcCCEEEEeccCCC-----HHHH
Q 040734 259 SLEEAVKVCLEGGLQGIVS---EVKGVF-------------------RNPGAVTKIKESKLSLLTYGRLNN-----VAEA 311 (361)
Q Consensus 259 ~l~~~~~~~~~~~~~~i~~---~~~~~~-------------------~~~~~v~~~~~~Gl~v~~w~Tvn~-----~~~~ 311 (361)
...+.+.||.++|+.++.+ +..|.. .-++++++++++|+.++.|-.-+. +.++
T Consensus 372 ~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sKGV~iilw~~t~~~~~n~e~~~ 451 (738)
T 2d73_A 372 NVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMMMHHETSASVRNYERHM 451 (738)
T ss_dssp HHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHTTCEEEEEEECTTBHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhCCCEEEEEEcCCCchhhHHHHH
Confidence 4567788999999999888 543320 027999999999999999931111 1222
Q ss_pred H---HHHHhcCccEEEeCCh
Q 040734 312 V---YMQHLMGIDGVIVDLV 328 (361)
Q Consensus 312 ~---~~~~~~GVdgI~TD~p 328 (361)
. +.+.++||.||=+|+.
T Consensus 452 d~~f~~~~~~Gv~GVKvdF~ 471 (738)
T 2d73_A 452 DKAYQFMADNGYNSVKSGYV 471 (738)
T ss_dssp HHHHHHHHHTTCCEEEEECC
T ss_pred HHHHHHHHHcCCCEEEeCcc
Confidence 2 2234799999999999
No 27
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=87.16 E-value=23 Score=34.38 Aligned_cols=136 Identities=12% Similarity=0.034 Sum_probs=85.4
Q ss_pred CHHHHHHhCCCCceEEEEEecCCccc--h-hhhHHHHHHHHHHHHHHHhcCCCCEEEEc--------CCHHHHHHHHHHC
Q 040734 168 TLQEAFQQVDPNVGFNVELKFDDHIV--Y-EQDYLIRVIQAILKIVFEFAENRPIIFST--------FQPDAAVLIRKLQ 236 (361)
Q Consensus 168 tL~EvL~~~~~~~~l~iEiK~~~~~~--~-~~~~~~~~v~~vl~~l~~~~~~~rv~~~S--------f~~~~l~~l~~~~ 236 (361)
.|.++|. .++..++-|+|..++.. . ...+ ...+..... .+ . ..++. -+.+.|+.+|+..
T Consensus 38 ~f~~al~--~~~~~vIaEvKraSPSkG~i~~~~~----~~~iA~~y~-~~-A--~~IsvLTd~~~F~gs~~dL~~vr~~v 107 (452)
T 1pii_A 38 HFYDALQ--GARTAFILECKKASPSKGVIRDDFD----PARIAAIYK-HY-A--SAISVLTDEKYFQGSFNFLPIVSQIA 107 (452)
T ss_dssp CHHHHHC--SSSCEEEEEECSEETTTEESCSSCC----HHHHHHHHT-TT-C--SEEEEECCSTTTCCCTTHHHHHHHHC
T ss_pred CHHHHHh--cCCCceEEEecCCCCCCCccCCCCC----HHHHHHHHH-hh-C--cEEEEEecccccCCCHHHHHHHHHhc
Confidence 5777774 23689999999654431 0 0001 112222222 22 2 23333 3677888888875
Q ss_pred CCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcccc--CChHHHHHHHHcCCEEEEeccCCCHHHHHHH
Q 040734 237 STYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVF--RNPGAVTKIKESKLSLLTYGRLNNVAEAVYM 314 (361)
Q Consensus 237 p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~--~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~ 314 (361)
++|+..= |+-...+ + +..++..|++++.+....+. .-.++++.+|+.|+.+.+= |++.+++.+.
T Consensus 108 -~lPvLrK---------DFI~d~~-Q-i~ea~~~GAD~ILLi~a~l~~~~l~~l~~~a~~lgm~~LvE--vh~~eE~~~A 173 (452)
T 1pii_A 108 -PQPILCK---------DFIIDPY-Q-IYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMGVLTE--VSNEEEQERA 173 (452)
T ss_dssp -CSCEEEE---------SCCCSHH-H-HHHHHHTTCSEEEEETTTCCHHHHHHHHHHHHHTTCEEEEE--ECSHHHHHHH
T ss_pred -CCCeEEE---------eccCCHH-H-HHHHHHcCCCEEEEEcccCCHHHHHHHHHHHHHcCCeEEEE--eCCHHHHHHH
Confidence 7887421 1111223 2 33378899999887776541 1247888999999999998 7899999888
Q ss_pred HHhcCccEEEeCCh
Q 040734 315 QHLMGIDGVIVDLV 328 (361)
Q Consensus 315 ~~~~GVdgI~TD~p 328 (361)
+ .+|.+.|-+|..
T Consensus 174 ~-~lga~iIGinnr 186 (452)
T 1pii_A 174 I-ALGAKVVGINNR 186 (452)
T ss_dssp H-HTTCSEEEEESE
T ss_pred H-HCCCCEEEEeCC
Confidence 7 699998888763
No 28
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=87.07 E-value=17 Score=32.73 Aligned_cols=141 Identities=13% Similarity=0.066 Sum_probs=78.5
Q ss_pred cCHHHHHHhCCCCceEEEEEecCCccchhhhHHHH-HHHHHHHHHHHhcCCCCEEEEc----C--CHHHHHHHHHHCCCC
Q 040734 167 CTLQEAFQQVDPNVGFNVELKFDDHIVYEQDYLIR-VIQAILKIVFEFAENRPIIFST----F--QPDAAVLIRKLQSTY 239 (361)
Q Consensus 167 ptL~EvL~~~~~~~~l~iEiK~~~~~~~~~~~~~~-~v~~vl~~l~~~~~~~rv~~~S----f--~~~~l~~l~~~~p~~ 239 (361)
..|.++|. .++..++-|+|..++.. +..... -...+.....+.| ..-+-+-. | +.+.++.+++. -++
T Consensus 41 ~~f~~al~--~~~~~~IaE~K~asPs~--g~i~~~~~p~~~A~~y~~~G-A~~isvltd~~~f~Gs~~~l~~ir~~-v~l 114 (272)
T 3qja_A 41 LDVMAALR--EPGIGVIAEVKRASPSA--GALATIADPAKLAQAYQDGG-ARIVSVVTEQRRFQGSLDDLDAVRAS-VSI 114 (272)
T ss_dssp CCHHHHHT--SSSCEEEEEEC---------------CHHHHHHHHHHTT-CSEEEEECCGGGHHHHHHHHHHHHHH-CSS
T ss_pred CCHHHHHh--cCCCeEEEEEecCCCCC--CccCCCCCHHHHHHHHHHcC-CCEEEEecChhhcCCCHHHHHHHHHh-CCC
Confidence 45677765 24689999999876541 110000 1123333333333 22233321 1 35677778776 467
Q ss_pred CEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcccc--CChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHh
Q 040734 240 PVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVF--RNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHL 317 (361)
Q Consensus 240 ~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~--~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~ 317 (361)
|+..--.. .. ..-+..+...|++++++....+- .-.++++.+++.|+.+.+- +++.+++.+.. .
T Consensus 115 Pvl~kdfi---------id--~~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lGl~~lve--v~t~ee~~~A~-~ 180 (272)
T 3qja_A 115 PVLRKDFV---------VQ--PYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVE--VHTEQEADRAL-K 180 (272)
T ss_dssp CEEEESCC---------CS--HHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTTCEEEEE--ESSHHHHHHHH-H
T ss_pred CEEECccc---------cC--HHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCCCcEEEE--cCCHHHHHHHH-H
Confidence 87632111 01 11245677899999987433220 1236688889999998765 68888888876 6
Q ss_pred cCccEEEeCC
Q 040734 318 MGIDGVIVDL 327 (361)
Q Consensus 318 ~GVdgI~TD~ 327 (361)
+|+|.|-++.
T Consensus 181 ~Gad~IGv~~ 190 (272)
T 3qja_A 181 AGAKVIGVNA 190 (272)
T ss_dssp HTCSEEEEES
T ss_pred CCCCEEEECC
Confidence 8999887663
No 29
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=85.50 E-value=14 Score=31.43 Aligned_cols=143 Identities=10% Similarity=0.079 Sum_probs=94.2
Q ss_pred cCCcccCHHHHHHhCC---CCceEEEEEecC-CccchhhhHHHHHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHC-
Q 040734 162 IDDSLCTLQEAFQQVD---PNVGFNVELKFD-DHIVYEQDYLIRVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQ- 236 (361)
Q Consensus 162 ~~~~iptL~EvL~~~~---~~~~l~iEiK~~-~~~~~~~~~~~~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~- 236 (361)
.+..+.+|+++.+.++ +.+.+++|+=.. +.+ .. -++.+.+. .+.--+.|-....++..++..
T Consensus 36 l~g~i~~l~~~v~~lk~~~K~v~Vh~Dli~Gls~d--------~~---ai~fL~~~--~~pdGIIsTk~~~i~~Ak~~gL 102 (192)
T 3kts_A 36 LETHVAQLKALVKYAQAGGKKVLLHADLVNGLKND--------DY---AIDFLCTE--ICPDGIISTRGNAIMKAKQHKM 102 (192)
T ss_dssp CSEETTTHHHHHHHHHHTTCEEEEEGGGEETCCCS--------HH---HHHHHHHT--TCCSEEEESCHHHHHHHHHTTC
T ss_pred ecCcHHHHHHHHHHHHHcCCeEEEecCchhccCCc--------HH---HHHHHHhC--CCCCEEEeCcHHHHHHHHHCCC
Confidence 4457899999999987 234455554332 111 11 23333332 123355577888888888763
Q ss_pred CCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHH-cCCEEEEeccCCCHHHHHHHH
Q 040734 237 STYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKE-SKLSLLTYGRLNNVAEAVYMQ 315 (361)
Q Consensus 237 p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~-~Gl~v~~w~Tvn~~~~~~~~~ 315 (361)
..++++|+.+. .+++...+.......+.+-+-.. +.|++++++++ .+.++++=|-+++.+++..++
T Consensus 103 ~tIqR~FliDS----------~al~~~~~~i~~~~PD~iEiLPG---i~p~iI~~i~~~~~~PiIaGGlI~~~edv~~al 169 (192)
T 3kts_A 103 LAIQRLFMIDS----------SAYNKGVALIQKVQPDCIELLPG---IIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVI 169 (192)
T ss_dssp EEEEEEECCSH----------HHHHHHHHHHHHHCCSEEEEECT---TCHHHHHHHHHHHCCCEEEESSCCSHHHHHHHH
T ss_pred eEEEEEEEEEc----------chHHHHHHHHhhcCCCEEEECCc---hhHHHHHHHHHhcCCCEEEECCcCCHHHHHHHH
Confidence 23566666543 35677778887777776532212 25788988854 579999998999999999987
Q ss_pred HhcCccEEEeCChHHH
Q 040734 316 HLMGIDGVIVDLVQEI 331 (361)
Q Consensus 316 ~~~GVdgI~TD~p~~~ 331 (361)
..|+++|.|-.....
T Consensus 170 -~aGA~aVsTs~~~LW 184 (192)
T 3kts_A 170 -ASGAIAVTTSNKHLW 184 (192)
T ss_dssp -TTTEEEEEECCGGGG
T ss_pred -HcCCeEEEeCCHHHh
Confidence 699999999877654
No 30
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=85.29 E-value=18 Score=31.52 Aligned_cols=143 Identities=13% Similarity=0.083 Sum_probs=81.9
Q ss_pred HHHHHHhC--CCCceEEEEEecCCccchhhhHHHHHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCCCEEEEcc
Q 040734 169 LQEAFQQV--DPNVGFNVELKFDDHIVYEQDYLIRVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTN 246 (361)
Q Consensus 169 L~EvL~~~--~~~~~l~iEiK~~~~~~~~~~~~~~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~ 246 (361)
+.++.+.+ +.++-+...-....+.. .. .....+.....+.|.. -+.+ -+.+.++.+|+.. ++|+.-+..
T Consensus 7 ~~~~~~~~~~~~~livscq~~~~~pl~-~~----~~~~~~A~a~~~~Ga~-~i~~--~~~~~i~~ir~~v-~~Pvig~~k 77 (229)
T 3q58_A 7 LARLEQSVHENGGLIVSCQPVPGSPMD-KP----EIVAAMAQAAASAGAV-AVRI--EGIENLRTVRPHL-SVPIIGIIK 77 (229)
T ss_dssp HHHHHHHHHHHCCEEEECCCCTTSTTC-SH----HHHHHHHHHHHHTTCS-EEEE--ESHHHHHHHGGGC-CSCEEEECB
T ss_pred HHHHHHHhhhcCCEEEEEeCCCCCCCC-Cc----chHHHHHHHHHHCCCc-EEEE--CCHHHHHHHHHhc-CCCEEEEEe
Confidence 45566666 44554544444333321 11 2334444444444432 2333 4678889998875 788754432
Q ss_pred CCCccccccc-cccHHHHHHHHHhcCCcEEEcCCccc---cCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccE
Q 040734 247 GGTEIFYDVR-RNSLEEAVKVCLEGGLQGIVSEVKGV---FRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDG 322 (361)
Q Consensus 247 ~~~~~~~d~~-~~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdg 322 (361)
..... .++. ...+++ +..+...|++.+.+..... ....++++.+|+.|+.+.+- +.+.+++.++. +.|+|.
T Consensus 78 ~~~~~-~~~~I~~~~~~-i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~--v~t~eea~~a~-~~Gad~ 152 (229)
T 3q58_A 78 RDLTG-SPVRITPYLQD-VDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLHGLLAMAD--CSTVNEGISCH-QKGIEF 152 (229)
T ss_dssp CCCSS-CCCCBSCSHHH-HHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEE--CSSHHHHHHHH-HTTCSE
T ss_pred ecCCC-CceEeCccHHH-HHHHHHcCCCEEEECccccCChHHHHHHHHHHHHCCCEEEEe--cCCHHHHHHHH-hCCCCE
Confidence 21000 0010 112333 3445678999887655421 01258899999999998876 68888888886 699999
Q ss_pred EEe
Q 040734 323 VIV 325 (361)
Q Consensus 323 I~T 325 (361)
|.+
T Consensus 153 Ig~ 155 (229)
T 3q58_A 153 IGT 155 (229)
T ss_dssp EEC
T ss_pred EEe
Confidence 964
No 31
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=84.64 E-value=7.3 Score=35.15 Aligned_cols=107 Identities=11% Similarity=0.143 Sum_probs=60.5
Q ss_pred HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcC-CccccCChHHHHHHHHcCCEEEEecc
Q 040734 226 PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSE-VKGVFRNPGAVTKIKESKLSLLTYGR 304 (361)
Q Consensus 226 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~-~~~~~~~~~~v~~~~~~Gl~v~~w~T 304 (361)
.+.++.+|+..+++|+.++....+ +....++...+.+.+.|++++.+. ... --..++++.++++|+.+..--+
T Consensus 85 ~~~v~~~r~~~~~~Pivlm~Y~n~-----v~~~g~~~f~~~~~~aGvdGvIipDlp~-ee~~~~~~~~~~~gl~~I~lva 158 (271)
T 3nav_A 85 FELIAQIRARNPETPIGLLMYANL-----VYARGIDDFYQRCQKAGVDSVLIADVPT-NESQPFVAAAEKFGIQPIFIAP 158 (271)
T ss_dssp HHHHHHHHHHCTTSCEEEEECHHH-----HHHTCHHHHHHHHHHHTCCEEEETTSCG-GGCHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHhcCCCCCEEEEecCcH-----HHHHhHHHHHHHHHHCCCCEEEECCCCH-HHHHHHHHHHHHcCCeEEEEEC
Confidence 356677777778889887753211 112346677788889999995543 321 1245788999999998654324
Q ss_pred CCC-HHHHHHHHHh----------cCccEEEeCChHHHHHHHHHh
Q 040734 305 LNN-VAEAVYMQHL----------MGIDGVIVDLVQEITEAVYDM 338 (361)
Q Consensus 305 vn~-~~~~~~~~~~----------~GVdgI~TD~p~~~~~~l~~~ 338 (361)
.++ .+.++..... .|+-|.-+..+..+.+++++.
T Consensus 159 p~t~~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~v 203 (271)
T 3nav_A 159 PTASDETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERL 203 (271)
T ss_dssp TTCCHHHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHH
Confidence 444 3445544321 366677666666666666553
No 32
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=84.61 E-value=7.4 Score=33.92 Aligned_cols=97 Identities=21% Similarity=0.152 Sum_probs=68.5
Q ss_pred HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCC------EE
Q 040734 226 PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKL------SL 299 (361)
Q Consensus 226 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl------~v 299 (361)
.+.++.+++.+|+..++.-+- .+.+ -.+.+...|+..+..+. .++++++.+++.|+ .+
T Consensus 52 ~~~I~~l~~~~p~~~IGAGTV-----------lt~~-~a~~ai~AGA~fivsP~----~~~evi~~~~~~~v~~~~~~~~ 115 (217)
T 3lab_A 52 LAAISAIKKAVPEAIVGAGTV-----------CTAD-DFQKAIDAGAQFIVSPG----LTPELIEKAKQVKLDGQWQGVF 115 (217)
T ss_dssp HHHHHHHHHHCTTSEEEEECC-----------CSHH-HHHHHHHHTCSEEEESS----CCHHHHHHHHHHHHHCSCCCEE
T ss_pred HHHHHHHHHHCCCCeEeeccc-----------cCHH-HHHHHHHcCCCEEEeCC----CcHHHHHHHHHcCCCccCCCeE
Confidence 467788888888865554221 1222 34456678888887654 28999999999999 88
Q ss_pred EEeccCCCHHHHHHHHHhcCccEEEeCChHHH---HHHHHHhcCCc
Q 040734 300 LTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEI---TEAVYDMIKPA 342 (361)
Q Consensus 300 ~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~---~~~l~~~~~~~ 342 (361)
+.= +.++.++.+.+ ++|+|.|-. +|... .++++.+..|-
T Consensus 116 ~PG--~~TptE~~~A~-~~Gad~vK~-FPa~~~gG~~~lkal~~p~ 157 (217)
T 3lab_A 116 LPG--VATASEVMIAA-QAGITQLKC-FPASAIGGAKLLKAWSGPF 157 (217)
T ss_dssp EEE--ECSHHHHHHHH-HTTCCEEEE-TTTTTTTHHHHHHHHHTTC
T ss_pred eCC--CCCHHHHHHHH-HcCCCEEEE-CccccccCHHHHHHHHhhh
Confidence 775 57899998886 699998866 66553 46777665543
No 33
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=84.04 E-value=3.3 Score=37.61 Aligned_cols=96 Identities=18% Similarity=0.233 Sum_probs=66.2
Q ss_pred cCCHHHHHHHHHHCC---CCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccc-c---------------
Q 040734 223 TFQPDAAVLIRKLQS---TYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGV-F--------------- 283 (361)
Q Consensus 223 Sf~~~~l~~l~~~~p---~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~-~--------------- 283 (361)
.-|.-+++..++..| +.|+..-.+.. .++ ......++..+..|+.++ .++... +
T Consensus 76 naN~iv~e~~~evlp~v~~iPV~Agv~~~-DP~-----~~~g~~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~ 148 (286)
T 2p10_A 76 NANQIVVDMAREVLPVVRHTPVLAGVNGT-DPF-----MVMSTFLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMS 148 (286)
T ss_dssp EHHHHHHHHHHHHGGGCSSSCEEEEECTT-CTT-----CCHHHHHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHhhhccCCCCCEEEEECCc-CCC-----cCHHHHHHHHHHhCCceE-EECCCcccccchhhhhHhhcCCC
Confidence 335556666666666 56775543322 122 134455577788999998 666511 1
Q ss_pred --CChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCCh
Q 040734 284 --RNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLV 328 (361)
Q Consensus 284 --~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p 328 (361)
.--++|+++|+.|+...+| ++++++.+.+. .+|+|.|...-|
T Consensus 149 ~~~eve~I~~A~~~gL~Ti~~--v~~~eeA~amA-~agpDiI~~h~g 192 (286)
T 2p10_A 149 YAQEVEMIAEAHKLDLLTTPY--VFSPEDAVAMA-KAGADILVCHMG 192 (286)
T ss_dssp HHHHHHHHHHHHHTTCEECCE--ECSHHHHHHHH-HHTCSEEEEECS
T ss_pred HHHHHHHHHHHHHCCCeEEEe--cCCHHHHHHHH-HcCCCEEEECCC
Confidence 1138899999999999999 68888998886 699999988877
No 34
>2rbg_A Putative uncharacterized protein ST0493; hypothetical protein, structural genomics, unknown function, NPPSFA; 1.75A {Sulfolobus tokodaii}
Probab=83.77 E-value=2.3 Score=32.95 Aligned_cols=64 Identities=19% Similarity=0.182 Sum_probs=42.4
Q ss_pred HHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHc-------CCEEEEeccCCCHHHHHHHHHhcCccEEEe
Q 040734 261 EEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKES-------KLSLLTYGRLNNVAEAVYMQHLMGIDGVIV 325 (361)
Q Consensus 261 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~-------Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T 325 (361)
...+.-++..|..-+.++.-.-+.-++++..++++ |+.+++| --++.+.|-+-+.+..+||+++
T Consensus 22 Rk~fkD~R~~GskKvviNvis~~~y~e~v~~~REAiLDNIDlG~el~~W-Kp~eVdkm~~k~~q~~~dGl~i 92 (126)
T 2rbg_A 22 RKIFLDVRSSGSKKTTINVFTEIQYQELVTLIREALLENIDIGYELFLW-KKNEVDIFLKNLEKSEVDGLLV 92 (126)
T ss_dssp HHHHHHHHHHTCSEEEEEEECSSCHHHHHHHTHHHHHHTTTSEEEEEEE-CGGGHHHHHHHHTTCCCCEEEE
T ss_pred HHHHHHHHhcCCceEEEEEecCCcHHHHHHHHHHHHHhccccceEEEEe-CHHHHHHHHHHHHHhCCCceEE
Confidence 33445567778776665543333456777777765 9999999 6666666533333578999996
No 35
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=83.01 E-value=26 Score=31.49 Aligned_cols=141 Identities=12% Similarity=-0.054 Sum_probs=86.6
Q ss_pred ccCHHHHHHhC--CCCceEEEEEecCCccc--h-hhhHHHHHHHHHHHHHHHhcCCCCEEEE------cCCHHHHHHHHH
Q 040734 166 LCTLQEAFQQV--DPNVGFNVELKFDDHIV--Y-EQDYLIRVIQAILKIVFEFAENRPIIFS------TFQPDAAVLIRK 234 (361)
Q Consensus 166 iptL~EvL~~~--~~~~~l~iEiK~~~~~~--~-~~~~~~~~v~~vl~~l~~~~~~~rv~~~------Sf~~~~l~~l~~ 234 (361)
...|.+.|..- ..+..++-|+|..++.. . +..+ ...+.....+.|. .-+-+- .-+.+.|+.+++
T Consensus 43 ~~~f~~al~~~~~~~~~~vIaE~KraSPSkG~i~~~~d----p~~~A~~y~~~GA-~~IsVltd~~~f~Gs~~~L~~ir~ 117 (272)
T 3tsm_A 43 PRGFLKALEAKRAAGQFALIAEIKKASPSKGLIRPDFD----PPALAKAYEEGGA-ACLSVLTDTPSFQGAPEFLTAARQ 117 (272)
T ss_dssp CCCHHHHHHHHHHTTCCEEEEEECSEETTTEESCSSCC----HHHHHHHHHHTTC-SEEEEECCSTTTCCCHHHHHHHHH
T ss_pred CCCHHHHHhhccccCCceEEEEeccCCCCCCccCCCCC----HHHHHHHHHHCCC-CEEEEeccccccCCCHHHHHHHHH
Confidence 34688888653 24589999999865531 0 0001 1223333444442 222221 126778888887
Q ss_pred HCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccC--ChHHHHHHHHcCCEEEEeccCCCHHHHH
Q 040734 235 LQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFR--NPGAVTKIKESKLSLLTYGRLNNVAEAV 312 (361)
Q Consensus 235 ~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~--~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~ 312 (361)
.. ++|+..--.. ...+ -+..++..|++++.+....+-. -.++++.+|+.|+.+.+= +++.+++.
T Consensus 118 ~v-~lPVl~Kdfi---------~d~~--qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lGl~~lve--vh~~eEl~ 183 (272)
T 3tsm_A 118 AC-SLPALRKDFL---------FDPY--QVYEARSWGADCILIIMASVDDDLAKELEDTAFALGMDALIE--VHDEAEME 183 (272)
T ss_dssp TS-SSCEEEESCC---------CSTH--HHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTTCEEEEE--ECSHHHHH
T ss_pred hc-CCCEEECCcc---------CCHH--HHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcCCeEEEE--eCCHHHHH
Confidence 63 6787532111 0111 2345678999998877654311 136788899999999987 68899998
Q ss_pred HHHHhcCccEEEeC
Q 040734 313 YMQHLMGIDGVIVD 326 (361)
Q Consensus 313 ~~~~~~GVdgI~TD 326 (361)
+.+ .+|+|.|-+|
T Consensus 184 ~A~-~~ga~iIGin 196 (272)
T 3tsm_A 184 RAL-KLSSRLLGVN 196 (272)
T ss_dssp HHT-TSCCSEEEEE
T ss_pred HHH-hcCCCEEEEC
Confidence 886 6999988776
No 36
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=82.82 E-value=6.4 Score=35.44 Aligned_cols=108 Identities=13% Similarity=0.125 Sum_probs=56.8
Q ss_pred HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccC
Q 040734 226 PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRL 305 (361)
Q Consensus 226 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tv 305 (361)
.+.++.+|+..+++|+.++....+ +....++..++.+.+.|++++.++---.--..++++.++++|+.+..--+.
T Consensus 83 ~~~v~~ir~~~~~~Pivlm~Y~np-----v~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP 157 (267)
T 3vnd_A 83 FDIITKVRAQHPDMPIGLLLYANL-----VFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPP 157 (267)
T ss_dssp HHHHHHHHHHCTTCCEEEEECHHH-----HHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECT
T ss_pred HHHHHHHHhcCCCCCEEEEecCcH-----HHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECC
Confidence 355566666656777766543211 111234666777788899996654221112458889999999986543244
Q ss_pred CC-HHHHHHHHHh----------cCccEEEeCChHHHHHHHHHh
Q 040734 306 NN-VAEAVYMQHL----------MGIDGVIVDLVQEITEAVYDM 338 (361)
Q Consensus 306 n~-~~~~~~~~~~----------~GVdgI~TD~p~~~~~~l~~~ 338 (361)
++ .+.++..... .|+-|..+..+..+.+++++.
T Consensus 158 ~t~~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~v 201 (267)
T 3vnd_A 158 NADADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQL 201 (267)
T ss_dssp TCCHHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHH
Confidence 44 3445444321 466676665565565665553
No 37
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=82.58 E-value=9.8 Score=37.55 Aligned_cols=100 Identities=14% Similarity=0.172 Sum_probs=66.2
Q ss_pred CCCEEEEcCCH------HHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcc--------
Q 040734 216 NRPIIFSTFQP------DAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKG-------- 281 (361)
Q Consensus 216 ~~rv~~~Sf~~------~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~-------- 281 (361)
.+.+++.+-+. +.++++++.+|+.++..-.- .+.+. .+.+...|++++......
T Consensus 269 vd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v-----------~t~e~-a~~~~~aGad~i~vg~g~gsi~~~~~ 336 (511)
T 3usb_A 269 VDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNV-----------ATAEA-TKALIEAGANVVKVGIGPGSICTTRV 336 (511)
T ss_dssp CSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEE-----------CSHHH-HHHHHHHTCSEEEECSSCSTTCCHHH
T ss_pred cceEEecccccchhhhhhHHHHHHHhCCCceEEeeee-----------ccHHH-HHHHHHhCCCEEEECCCCcccccccc
Confidence 45667766554 78889999988877764221 12333 344567889888642110
Q ss_pred ---c-cCC----hHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCCh
Q 040734 282 ---V-FRN----PGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLV 328 (361)
Q Consensus 282 ---~-~~~----~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p 328 (361)
. ..+ .+..+.+++.++.|++-|-+.+..++.+++ .+|+|+|+.-.+
T Consensus 337 ~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal-a~GA~~V~vGs~ 390 (511)
T 3usb_A 337 VAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKAL-AAGAHVVMLGSM 390 (511)
T ss_dssp HHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHH-HTTCSEEEESTT
T ss_pred ccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHH-HhCchhheecHH
Confidence 0 001 133334566689999988899999999987 699999998765
No 38
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=81.69 E-value=13 Score=32.31 Aligned_cols=97 Identities=21% Similarity=0.196 Sum_probs=67.0
Q ss_pred HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccC
Q 040734 226 PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRL 305 (361)
Q Consensus 226 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tv 305 (361)
.+.++.+++.+|++.++.-+-. ..+-.+.+...|+++++... .+++.++.+++.|..++.= +
T Consensus 56 ~~~i~~l~~~~~~l~vgaGtvl------------~~d~~~~A~~aGAd~v~~p~----~d~~v~~~ar~~g~~~i~G--v 117 (224)
T 1vhc_A 56 ADAIRLLRANRPDFLIAAGTVL------------TAEQVVLAKSSGADFVVTPG----LNPKIVKLCQDLNFPITPG--V 117 (224)
T ss_dssp HHHHHHHHHHCTTCEEEEESCC------------SHHHHHHHHHHTCSEEECSS----CCHHHHHHHHHTTCCEECE--E
T ss_pred HHHHHHHHHhCcCcEEeeCcEe------------eHHHHHHHHHCCCCEEEECC----CCHHHHHHHHHhCCCEEec--c
Confidence 3456667777777655443210 12445677889999998763 2788899999999888763 5
Q ss_pred CCHHHHHHHHHhcCccEEEeCChHH-H--HHHHHHhcCCc
Q 040734 306 NNVAEAVYMQHLMGIDGVIVDLVQE-I--TEAVYDMIKPA 342 (361)
Q Consensus 306 n~~~~~~~~~~~~GVdgI~TD~p~~-~--~~~l~~~~~~~ 342 (361)
.++.++.+.. .+|+|.|.- +|.. + .++++....+.
T Consensus 118 ~t~~e~~~A~-~~Gad~vk~-Fpa~~~gG~~~lk~l~~~~ 155 (224)
T 1vhc_A 118 NNPMAIEIAL-EMGISAVKF-FPAEASGGVKMIKALLGPY 155 (224)
T ss_dssp CSHHHHHHHH-HTTCCEEEE-TTTTTTTHHHHHHHHHTTT
T ss_pred CCHHHHHHHH-HCCCCEEEE-eeCccccCHHHHHHHHhhC
Confidence 6788988886 699999887 8732 2 56666655443
No 39
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=80.95 E-value=28 Score=30.39 Aligned_cols=143 Identities=12% Similarity=0.103 Sum_probs=81.2
Q ss_pred HHHHHHhC--CCCceEEEEEecCCccchhhhHHHHHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCCCEEEEcc
Q 040734 169 LQEAFQQV--DPNVGFNVELKFDDHIVYEQDYLIRVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTN 246 (361)
Q Consensus 169 L~EvL~~~--~~~~~l~iEiK~~~~~~~~~~~~~~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~ 246 (361)
+.++++.+ +.++.+...-....+.. .. .....+.....+.|.. -+.+ -+.+.++.+|+.. ++|+.-+..
T Consensus 7 ~~~~~~~~~~~~~livscq~~~~~pl~-~~----~~~~~~A~a~~~~Ga~-~i~~--~~~~~i~~ir~~v-~~Pvig~~k 77 (232)
T 3igs_A 7 LEQLDKNIAASGGLIVSCQPVPGSPLD-KP----EIVAAMALAAEQAGAV-AVRI--EGIDNLRMTRSLV-SVPIIGIIK 77 (232)
T ss_dssp HHHHHHHHHHHCCEEEECCCCTTCTTC-SH----HHHHHHHHHHHHTTCS-EEEE--ESHHHHHHHHTTC-CSCEEEECB
T ss_pred HHHHHHHhhhcCCEEEEEeCCCCCCCC-Cc----chHHHHHHHHHHCCCe-EEEE--CCHHHHHHHHHhc-CCCEEEEEe
Confidence 44555555 44555544444333321 11 2334445555555532 2333 3578889998875 788743332
Q ss_pred CCCcccccc-ccccHHHHHHHHHhcCCcEEEcCCccc---cCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccE
Q 040734 247 GGTEIFYDV-RRNSLEEAVKVCLEGGLQGIVSEVKGV---FRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDG 322 (361)
Q Consensus 247 ~~~~~~~d~-~~~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdg 322 (361)
..... .++ -...+++ +..+...|++.+.+..... ....++++.+|+.|+.+.+- +.+.+++.++. ..|+|.
T Consensus 78 ~d~~~-~~~~I~~~~~~-i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~--v~t~eea~~a~-~~Gad~ 152 (232)
T 3igs_A 78 RDLDE-SPVRITPFLDD-VDALAQAGAAIIAVDGTARQRPVAVEALLARIHHHHLLTMAD--CSSVDDGLACQ-RLGADI 152 (232)
T ss_dssp CCCSS-CCCCBSCSHHH-HHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEE--CCSHHHHHHHH-HTTCSE
T ss_pred ecCCC-cceEeCccHHH-HHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHCCCEEEEe--CCCHHHHHHHH-hCCCCE
Confidence 11000 001 0112333 3445678999887655321 11358899999999988875 68888888886 699999
Q ss_pred EEe
Q 040734 323 VIV 325 (361)
Q Consensus 323 I~T 325 (361)
|.+
T Consensus 153 Ig~ 155 (232)
T 3igs_A 153 IGT 155 (232)
T ss_dssp EEC
T ss_pred EEE
Confidence 964
No 40
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=79.71 E-value=19 Score=30.62 Aligned_cols=138 Identities=14% Similarity=0.088 Sum_probs=89.5
Q ss_pred CcccCHHHHHHhCC-CC--ceEEEEEecC-CccchhhhHHHHHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHC-CC
Q 040734 164 DSLCTLQEAFQQVD-PN--VGFNVELKFD-DHIVYEQDYLIRVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQ-ST 238 (361)
Q Consensus 164 ~~iptL~EvL~~~~-~~--~~l~iEiK~~-~~~~~~~~~~~~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~-p~ 238 (361)
..+..|+++.+.++ .+ +.+++|+=.. +.+ +..++- ++..+ .-.+.|-....+...++.. ..
T Consensus 40 g~I~~L~~iv~~ik~~gK~vivh~DlI~GLs~d-------~~ai~f----L~~~~---pdGIIsTk~~~i~~Akk~GL~t 105 (188)
T 1vkf_A 40 SDILNLKFHLKILKDRGKTVFVDMDFVNGLGEG-------EEAILF----VKKAG---ADGIITIKPKNYVVAKKNGIPA 105 (188)
T ss_dssp EETTTHHHHHHHHHHTTCEEEEEGGGEETCCSS-------HHHHHH----HHHHT---CSEEEESCHHHHHHHHHTTCCE
T ss_pred CcHHHHHHHHHHHHHCCCeEEEecCcccccCCC-------HHHHHH----HHhcC---CCEEEcCcHHHHHHHHHcCCEE
Confidence 45678999999986 34 4555554432 111 012222 23333 2355566888888887652 34
Q ss_pred CCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhc
Q 040734 239 YPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLM 318 (361)
Q Consensus 239 ~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~ 318 (361)
++++|+.+. .++....+.......+.+-+--. .+.|++++.+ .+..+++=|-+++++++.. + ..
T Consensus 106 IqR~FliDs----------~al~~~~~~I~~~kPD~iEiLPg--~v~p~~I~~v--~~~PiIaGGlI~t~edv~~-l-~a 169 (188)
T 1vkf_A 106 VLRFFALDS----------KAVERGIEQIETLGVDVVEVLPG--AVAPKVARKI--PGRTVIAAGLVETEEEARE-I-LK 169 (188)
T ss_dssp EEEEECCSH----------HHHHHHHHHHHHHTCSEEEEESG--GGHHHHHTTS--TTSEEEEESCCCSHHHHHH-H-TT
T ss_pred eeEEEEEEe----------HHHhhhhhhccccCCCeEeecCC--CchHHHHHHh--cCCCEEEECCcCCHHHHHH-H-HC
Confidence 666777643 24666667777767766432211 1257888888 7889999999999999988 7 69
Q ss_pred CccEEEeCChHHH
Q 040734 319 GIDGVIVDLVQEI 331 (361)
Q Consensus 319 GVdgI~TD~p~~~ 331 (361)
|+++|.|-.++..
T Consensus 170 GA~aIsTs~~~LW 182 (188)
T 1vkf_A 170 HVSAISTSSRILW 182 (188)
T ss_dssp TSSEEEECCHHHH
T ss_pred CCeEEEeCCHHHh
Confidence 9999999887764
No 41
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=79.67 E-value=20 Score=31.16 Aligned_cols=96 Identities=17% Similarity=0.079 Sum_probs=66.8
Q ss_pred HHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccCC
Q 040734 227 DAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLN 306 (361)
Q Consensus 227 ~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn 306 (361)
+.++.+++.+|++.++.-+-. ..+-.+.+...|+++++... .+++.++..++.|..++.= +.
T Consensus 66 ~~i~~l~~~~~~~~igagtvl------------~~d~~~~A~~aGAd~v~~p~----~d~~v~~~~~~~g~~~i~G--~~ 127 (225)
T 1mxs_A 66 KAIQVLREQRPELCVGAGTVL------------DRSMFAAVEAAGAQFVVTPG----ITEDILEAGVDSEIPLLPG--IS 127 (225)
T ss_dssp HHHHHHHHHCTTSEEEEECCC------------SHHHHHHHHHHTCSSEECSS----CCHHHHHHHHHCSSCEECE--EC
T ss_pred HHHHHHHHhCcccEEeeCeEe------------eHHHHHHHHHCCCCEEEeCC----CCHHHHHHHHHhCCCEEEe--eC
Confidence 455667777777665543210 12345677788999998763 2789999999999887653 56
Q ss_pred CHHHHHHHHHhcCccEEEeCChHHH---HHHHHHhcCCc
Q 040734 307 NVAEAVYMQHLMGIDGVIVDLVQEI---TEAVYDMIKPA 342 (361)
Q Consensus 307 ~~~~~~~~~~~~GVdgI~TD~p~~~---~~~l~~~~~~~ 342 (361)
++.++.+.. ..|+|.|-- +|... .++++....+.
T Consensus 128 t~~e~~~A~-~~Gad~vk~-FPa~~~~G~~~lk~i~~~~ 164 (225)
T 1mxs_A 128 TPSEIMMGY-ALGYRRFKL-FPAEISGGVAAIKAFGGPF 164 (225)
T ss_dssp SHHHHHHHH-TTTCCEEEE-TTHHHHTHHHHHHHHHTTT
T ss_pred CHHHHHHHH-HCCCCEEEE-ccCccccCHHHHHHHHhhC
Confidence 788888876 799999887 88542 46677665443
No 42
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=78.78 E-value=7.8 Score=33.42 Aligned_cols=92 Identities=13% Similarity=0.020 Sum_probs=58.7
Q ss_pred cCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcccc-CChHHHHHHHHcCCEEEE
Q 040734 223 TFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVF-RNPGAVTKIKESKLSLLT 301 (361)
Q Consensus 223 Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~-~~~~~v~~~~~~Gl~v~~ 301 (361)
++.++.++.+|+..|+.++.+..... +. .....+.+.+.|++++.++..... .-.++++.++++|+.+.+
T Consensus 44 ~~G~~~i~~lr~~~~~~~i~ld~~l~-----d~----p~~~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~~~ 114 (218)
T 3jr2_A 44 AEGMKAVSTLRHNHPNHILVCDMKTT-----DG----GAILSRMAFEAGADWITVSAAAHIATIAACKKVADELNGEIQI 114 (218)
T ss_dssp HHTTHHHHHHHHHCTTSEEEEEEEEC-----SC----HHHHHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEE
T ss_pred hcCHHHHHHHHHhCCCCcEEEEEeec-----cc----HHHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCccce
Confidence 35678899999998887776533211 11 122335556789999887754210 013567788999998874
Q ss_pred --eccCCCHHHHHHHHHhcCccEEEe
Q 040734 302 --YGRLNNVAEAVYMQHLMGIDGVIV 325 (361)
Q Consensus 302 --w~Tvn~~~~~~~~~~~~GVdgI~T 325 (361)
- .+.+++++.++. ..|+|.+.+
T Consensus 115 d~l-~~~T~~~~~~~~-~~g~d~v~~ 138 (218)
T 3jr2_A 115 EIY-GNWTMQDAKAWV-DLGITQAIY 138 (218)
T ss_dssp ECC-SSCCHHHHHHHH-HTTCCEEEE
T ss_pred eee-ecCCHHHHHHHH-HcCccceee
Confidence 3 344666777775 579997654
No 43
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=78.01 E-value=43 Score=30.96 Aligned_cols=112 Identities=12% Similarity=-0.005 Sum_probs=68.7
Q ss_pred HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccc---------cCChHHHHHHHHc-
Q 040734 226 PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGV---------FRNPGAVTKIKES- 295 (361)
Q Consensus 226 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~---------~~~~~~v~~~~~~- 295 (361)
.++++.+|+.. ++|++.=..........+......+..+...+.|++.+++..... -..-+++..+++.
T Consensus 198 ~eiv~avr~~v-~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~ 276 (340)
T 3gr7_A 198 GEVIDAVREVW-DGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA 276 (340)
T ss_dssp HHHHHHHHHHC-CSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT
T ss_pred HHHHHHHHHhc-CCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc
Confidence 35666677666 677765443321000011112344555666778899888753211 0123567777654
Q ss_pred CCEEEEeccCCCHHHHHHHHHhcC-ccEEEeCC-----hHHHHHHHHHhc
Q 040734 296 KLSLLTYGRLNNVAEAVYMQHLMG-IDGVIVDL-----VQEITEAVYDMI 339 (361)
Q Consensus 296 Gl~v~~w~Tvn~~~~~~~~~~~~G-VdgI~TD~-----p~~~~~~l~~~~ 339 (361)
++.|++=|-+++++++++++ ..| +|+|.--+ |+...++.+.+.
T Consensus 277 ~iPVi~~GgI~s~e~a~~~L-~~G~aD~V~iGR~~lanPdl~~ki~~~l~ 325 (340)
T 3gr7_A 277 DIPTGAVGLITSGWQAEEIL-QNGRADLVFLGRELLRNPYWPYAAARELG 325 (340)
T ss_dssp TCCEEEESSCCCHHHHHHHH-HTTSCSEEEECHHHHHCTTHHHHHHHHTT
T ss_pred CCcEEeeCCCCCHHHHHHHH-HCCCeeEEEecHHHHhCchHHHHHHHHCC
Confidence 78888877889999999987 577 99998764 566666666654
No 44
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=75.93 E-value=20 Score=30.88 Aligned_cols=96 Identities=19% Similarity=0.079 Sum_probs=66.1
Q ss_pred HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccC
Q 040734 226 PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRL 305 (361)
Q Consensus 226 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tv 305 (361)
.+.++.+++.+|++.++.-+-- ..+-.+.+...|+++++... .+++.++..++.|..++.= +
T Consensus 55 ~~~i~~l~~~~~~~~vgagtvi------------~~d~~~~A~~aGAd~v~~p~----~d~~v~~~~~~~g~~~i~G--~ 116 (214)
T 1wbh_A 55 VDAIRAIAKEVPEAIVGAGTVL------------NPQQLAEVTEAGAQFAISPG----LTEPLLKAATEGTIPLIPG--I 116 (214)
T ss_dssp HHHHHHHHHHCTTSEEEEESCC------------SHHHHHHHHHHTCSCEEESS----CCHHHHHHHHHSSSCEEEE--E
T ss_pred HHHHHHHHHHCcCCEEeeCEEE------------EHHHHHHHHHcCCCEEEcCC----CCHHHHHHHHHhCCCEEEe--c
Confidence 3456667777776655442210 12445677888999998763 2789999999999887763 5
Q ss_pred CCHHHHHHHHHhcCccEEEeCChHHH---HHHHHHhcCC
Q 040734 306 NNVAEAVYMQHLMGIDGVIVDLVQEI---TEAVYDMIKP 341 (361)
Q Consensus 306 n~~~~~~~~~~~~GVdgI~TD~p~~~---~~~l~~~~~~ 341 (361)
.++.++.+.. ..|+|.|.- +|... .++++....+
T Consensus 117 ~t~~e~~~A~-~~Gad~v~~-Fpa~~~gG~~~lk~i~~~ 153 (214)
T 1wbh_A 117 STVSELMLGM-DYGLKEFKF-FPAEANGGVKALQAIAGP 153 (214)
T ss_dssp SSHHHHHHHH-HTTCCEEEE-TTTTTTTHHHHHHHHHTT
T ss_pred CCHHHHHHHH-HCCCCEEEE-ecCccccCHHHHHHHhhh
Confidence 6788888886 699998877 87432 4666665543
No 45
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=75.57 E-value=15 Score=31.25 Aligned_cols=52 Identities=15% Similarity=0.059 Sum_probs=39.3
Q ss_pred ChHHHHHHHHcCCEEEEecc------CCCHHHHHHHHHhcCccEEEeCChHHHHHHHHH
Q 040734 285 NPGAVTKIKESKLSLLTYGR------LNNVAEAVYMQHLMGIDGVIVDLVQEITEAVYD 337 (361)
Q Consensus 285 ~~~~v~~~~~~Gl~v~~w~T------vn~~~~~~~~~~~~GVdgI~TD~p~~~~~~l~~ 337 (361)
-++.++.+|++|..+++. . -++...+.++....++|||+|=.+..+..+.+.
T Consensus 43 l~~~v~~lk~~~K~v~Vh-~Dli~Gls~d~~ai~fL~~~~~pdGIIsTk~~~i~~Ak~~ 100 (192)
T 3kts_A 43 LKALVKYAQAGGKKVLLH-ADLVNGLKNDDYAIDFLCTEICPDGIISTRGNAIMKAKQH 100 (192)
T ss_dssp HHHHHHHHHHTTCEEEEE-GGGEETCCCSHHHHHHHHHTTCCSEEEESCHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCeEEEe-cCchhccCCcHHHHHHHHhCCCCCEEEeCcHHHHHHHHHC
Confidence 478999999999999886 3 235555656543358999999999998877653
No 46
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=75.14 E-value=22 Score=32.58 Aligned_cols=62 Identities=15% Similarity=0.275 Sum_probs=48.8
Q ss_pred HHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 260 LEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
+.+.++.+...+++.+.++... ..++++.+++.|++++. .+.+..+...+. ..|+|+|+.+.
T Consensus 85 ~~~~~~~~~~~g~d~V~~~~g~---p~~~~~~l~~~gi~vi~--~v~t~~~a~~~~-~~GaD~i~v~g 146 (328)
T 2gjl_A 85 YAEYRAAIIEAGIRVVETAGND---PGEHIAEFRRHGVKVIH--KCTAVRHALKAE-RLGVDAVSIDG 146 (328)
T ss_dssp HHHHHHHHHHTTCCEEEEEESC---CHHHHHHHHHTTCEEEE--EESSHHHHHHHH-HTTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEcCCC---cHHHHHHHHHcCCCEEe--eCCCHHHHHHHH-HcCCCEEEEEC
Confidence 5566777888899998877552 47899999999998874 467888887775 69999999853
No 47
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=74.87 E-value=14 Score=31.53 Aligned_cols=79 Identities=8% Similarity=0.028 Sum_probs=51.6
Q ss_pred cHHHHHHHHHhcCCcEEEcCC--cc--ccCC--hHHHHHHHHc-CCEEEEeccCCCHHH-HHHHHHhcCccEEEe-----
Q 040734 259 SLEEAVKVCLEGGLQGIVSEV--KG--VFRN--PGAVTKIKES-KLSLLTYGRLNNVAE-AVYMQHLMGIDGVIV----- 325 (361)
Q Consensus 259 ~l~~~~~~~~~~~~~~i~~~~--~~--~~~~--~~~v~~~~~~-Gl~v~~w~Tvn~~~~-~~~~~~~~GVdgI~T----- 325 (361)
.+.+.++.+.+.|++.+++.. .. ...+ ++.++.+++. +..+.+-..+|++++ ++.+ ...|+|+|+.
T Consensus 17 ~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~~~~~~v~l~v~d~~~~i~~~-~~~gad~v~vh~~~~ 95 (220)
T 2fli_A 17 NFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAF-AQAGADIMTIHTEST 95 (220)
T ss_dssp GHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSSGGGGHHHH-HHHTCSEEEEEGGGC
T ss_pred HHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhCCCCEEEEEeecCHHHHHHHH-HHcCCCEEEEccCcc
Confidence 466777788888887765442 11 1112 7899999887 666665435677653 5445 4699999976
Q ss_pred CChHHHHHHHHHh
Q 040734 326 DLVQEITEAVYDM 338 (361)
Q Consensus 326 D~p~~~~~~l~~~ 338 (361)
+.+..+.+.+++.
T Consensus 96 ~~~~~~~~~~~~~ 108 (220)
T 2fli_A 96 RHIHGALQKIKAA 108 (220)
T ss_dssp SCHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHc
Confidence 5666666666553
No 48
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=73.91 E-value=11 Score=37.09 Aligned_cols=100 Identities=10% Similarity=0.108 Sum_probs=65.6
Q ss_pred CCCEEEEcCC------HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcc--c-----
Q 040734 216 NRPIIFSTFQ------PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKG--V----- 282 (361)
Q Consensus 216 ~~rv~~~Sf~------~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~--~----- 282 (361)
.+.+.+.+-. .+.++.+++..|+.|+..-.- .+.+ ..+.+.+.|++++.+.... .
T Consensus 244 ~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v-----------~t~e-~a~~l~~aGaD~I~Vg~g~Gs~~~tr~ 311 (496)
T 4fxs_A 244 VDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNV-----------ATAE-GARALIEAGVSAVKVGIGPGSICTTRI 311 (496)
T ss_dssp CSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEE-----------CSHH-HHHHHHHHTCSEEEECSSCCTTBCHHH
T ss_pred CceEEeccccccchHHHHHHHHHHHHCCCceEEEccc-----------CcHH-HHHHHHHhCCCEEEECCCCCcCccccc
Confidence 3456665433 278889999999888865211 1233 3345567899988753110 0
Q ss_pred -----cCC----hHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCCh
Q 040734 283 -----FRN----PGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLV 328 (361)
Q Consensus 283 -----~~~----~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p 328 (361)
... .+..+.+++.+++|++=|-+.++.++.+++ .+|+|+|+.-..
T Consensus 312 ~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kal-a~GAd~V~iGs~ 365 (496)
T 4fxs_A 312 VTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAI-AAGASCVMVGSM 365 (496)
T ss_dssp HHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHH-HTTCSEEEESTT
T ss_pred ccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHH-HcCCCeEEecHH
Confidence 001 244445556699999988899999999987 699999998754
No 49
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=73.51 E-value=28 Score=32.10 Aligned_cols=137 Identities=20% Similarity=0.301 Sum_probs=79.2
Q ss_pred ccCHHHHHHhCCCCceEEEEEecCCccchhhhHHHHHHHHHHHHHHHhcCCCCEEEEcCCH-----------HHHHHHHH
Q 040734 166 LCTLQEAFQQVDPNVGFNVELKFDDHIVYEQDYLIRVIQAILKIVFEFAENRPIIFSTFQP-----------DAAVLIRK 234 (361)
Q Consensus 166 iptL~EvL~~~~~~~~l~iEiK~~~~~~~~~~~~~~~v~~vl~~l~~~~~~~rv~~~Sf~~-----------~~l~~l~~ 234 (361)
+.++.|+|+....+-.-..=+-..+. ..++.+++..++.+ .+++++.... ..+..+.+
T Consensus 3 lv~~~~ll~~A~~~~yAV~AfNv~n~---------e~~~Ail~AAee~~--sPvIlq~s~g~~~y~g~~~~~~~v~~aa~ 71 (323)
T 2isw_A 3 LCTLRQMLGEARKHKYGVGAFNVNNM---------EQIQGIMKAVVQLK--SPVILQCSRGALKYSDMIYLKKLCEAALE 71 (323)
T ss_dssp BCCHHHHHHHHHHTTCCEEEEECCSH---------HHHHHHHHHHHHTT--CCEEEEEEHHHHHHTTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCceEEEEeeCCH---------HHHHHHHHHHHHhC--CCEEEECChhHHHhCCHHHHHHHHHHHHH
Confidence 45777888776521111111111111 45677777766653 4677764321 23333444
Q ss_pred HCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccc------cCChHHHHHHHHcCCEE----EEecc
Q 040734 235 LQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGV------FRNPGAVTKIKESKLSL----LTYGR 304 (361)
Q Consensus 235 ~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~------~~~~~~v~~~~~~Gl~v----~~w~T 304 (361)
..+.+|+++=.+-+. ++ +.+..+.+.|+..+-++.+.+ -.+.++++.+|+.|+.| ...+.
T Consensus 72 ~~~~VPValHlDHg~---------~~-e~i~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg 141 (323)
T 2isw_A 72 KHPDIPICIHLDHGD---------TL-ESVKMAIDLGFSSVMIDASHHPFDENVRITKEVVAYAHARSVSVEAELGTLGG 141 (323)
T ss_dssp HCTTSCEEEEEEEEC---------SH-HHHHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESCC--
T ss_pred hcCCCcEEEECCCCC---------CH-HHHHHHHHcCCCeEEecCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeCCccC
Confidence 447889876554322 22 334556678999888876643 24679999999999888 22211
Q ss_pred ----------CCCHHHHHHHHHhcCccEE
Q 040734 305 ----------LNNVAEAVYMQHLMGIDGV 323 (361)
Q Consensus 305 ----------vn~~~~~~~~~~~~GVdgI 323 (361)
.-+|++..++....|||.+
T Consensus 142 ~Ed~v~~~~~yTdPeea~~Fv~~TgvD~L 170 (323)
T 2isw_A 142 IEEDVQNTVQLTEPQDAKKFVELTGVDAL 170 (323)
T ss_dssp --------CCCCCHHHHHHHHHHHCCSEE
T ss_pred CccCcccccccCCHHHHHHHHHHHCCCEE
Confidence 1357777777666787754
No 50
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=70.25 E-value=15 Score=34.34 Aligned_cols=63 Identities=14% Similarity=0.166 Sum_probs=48.6
Q ss_pred HHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 260 LEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
+.+.++.+...+++.+.++.... .++.++.+++.|+.|.+ .+.+.++...+. ..|+|+|+.+.
T Consensus 111 ~~~~~~~~~~~g~~~V~~~~g~~--~~~~i~~~~~~g~~v~~--~v~t~~~a~~a~-~~GaD~i~v~g 173 (369)
T 3bw2_A 111 YDAKLAVLLDDPVPVVSFHFGVP--DREVIARLRRAGTLTLV--TATTPEEARAVE-AAGADAVIAQG 173 (369)
T ss_dssp HHHHHHHHHHSCCSEEEEESSCC--CHHHHHHHHHTTCEEEE--EESSHHHHHHHH-HTTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEeCCCC--cHHHHHHHHHCCCeEEE--ECCCHHHHHHHH-HcCCCEEEEeC
Confidence 45667778888999888776532 57899999999987655 467888887775 69999998743
No 51
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=70.10 E-value=69 Score=29.61 Aligned_cols=113 Identities=13% Similarity=0.003 Sum_probs=66.2
Q ss_pred HHHHHHHHHHCC-CCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccc----------cCChHHHHHHHH
Q 040734 226 PDAAVLIRKLQS-TYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGV----------FRNPGAVTKIKE 294 (361)
Q Consensus 226 ~~~l~~l~~~~p-~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~----------~~~~~~v~~~~~ 294 (361)
.++++.+|+..+ ++|+++=..........+......+..+.+.+.|++++++..... -....++..+++
T Consensus 206 ~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~ 285 (349)
T 3hgj_A 206 LQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRK 285 (349)
T ss_dssp HHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHH
Confidence 455666776654 677765443321000011101122334445567888887653110 012356777766
Q ss_pred c-CCEEEEeccCCCHHHHHHHHHhcC-ccEEEeCC-----hHHHHHHHHHhc
Q 040734 295 S-KLSLLTYGRLNNVAEAVYMQHLMG-IDGVIVDL-----VQEITEAVYDMI 339 (361)
Q Consensus 295 ~-Gl~v~~w~Tvn~~~~~~~~~~~~G-VdgI~TD~-----p~~~~~~l~~~~ 339 (361)
. ++.|++=|-+.+++++++++ ..| +|+|.--+ |+...++.+.+.
T Consensus 286 ~~~iPVi~~Ggi~t~e~a~~~l-~~G~aD~V~iGR~~lanPdl~~k~~~~l~ 336 (349)
T 3hgj_A 286 RVGLRTGAVGLITTPEQAETLL-QAGSADLVLLGRVLLRDPYFPLRAAKALG 336 (349)
T ss_dssp HHCCEEEECSSCCCHHHHHHHH-HTTSCSEEEESTHHHHCTTHHHHHHHHTT
T ss_pred HcCceEEEECCCCCHHHHHHHH-HCCCceEEEecHHHHhCchHHHHHHHHCC
Confidence 4 78888877788999999987 577 99998766 455666666554
No 52
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=69.06 E-value=54 Score=28.06 Aligned_cols=41 Identities=15% Similarity=0.372 Sum_probs=33.7
Q ss_pred hHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 286 PGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
-+.++.+++.++.|.+=|-+++.+++.+++ ..|+|+|+.-.
T Consensus 176 ~~~i~~~~~~~ipvia~GGI~s~~~~~~~~-~~Gad~v~vGs 216 (234)
T 1yxy_A 176 VALIEALCKAGIAVIAEGKIHSPEEAKKIN-DLGVAGIVVGG 216 (234)
T ss_dssp HHHHHHHHHTTCCEEEESCCCSHHHHHHHH-TTCCSEEEECH
T ss_pred HHHHHHHHhCCCCEEEECCCCCHHHHHHHH-HCCCCEEEEch
Confidence 366777766689998887899999999987 69999998765
No 53
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=68.11 E-value=24 Score=29.62 Aligned_cols=90 Identities=14% Similarity=0.062 Sum_probs=53.3
Q ss_pred CCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccc-cCChHHHHHHHHcCCEEEEe
Q 040734 224 FQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGV-FRNPGAVTKIKESKLSLLTY 302 (361)
Q Consensus 224 f~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~-~~~~~~v~~~~~~Gl~v~~w 302 (361)
+.+..++.+++..|+.|+..-.... |. .....+.+...|+++++++...- ....+.++.+++.|+.+.+-
T Consensus 39 ~g~~~i~~l~~~~~~~~i~~~l~~~-----di----~~~~~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~gv~ 109 (207)
T 3ajx_A 39 EGLSVITAVKKAHPDKIVFADMKTM-----DA----GELEADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGVVVD 109 (207)
T ss_dssp HCTHHHHHHHHHSTTSEEEEEEEEC-----SC----HHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEE
T ss_pred hCHHHHHHHHHhCCCCeEEEEEEec-----Cc----cHHHHHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCceEEE
Confidence 4466888999888777765311110 10 12234566788999987554321 11235667888889987553
Q ss_pred c-cCCCHHH-HHHHHHhcCccEE
Q 040734 303 G-RLNNVAE-AVYMQHLMGIDGV 323 (361)
Q Consensus 303 ~-Tvn~~~~-~~~~~~~~GVdgI 323 (361)
. +.+++.+ +..+. ..|+|.|
T Consensus 110 ~~s~~~p~~~~~~~~-~~g~d~v 131 (207)
T 3ajx_A 110 LIGIEDKATRAQEVR-ALGAKFV 131 (207)
T ss_dssp CTTCSSHHHHHHHHH-HTTCSEE
T ss_pred EecCCChHHHHHHHH-HhCCCEE
Confidence 0 2335555 44443 5799988
No 54
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=68.02 E-value=15 Score=31.16 Aligned_cols=51 Identities=12% Similarity=0.093 Sum_probs=40.7
Q ss_pred ChHHHHHHHHcCCEEEEecc------CCCHHHHHHHHHhcCccEEEeCChHHHHHHHHH
Q 040734 285 NPGAVTKIKESKLSLLTYGR------LNNVAEAVYMQHLMGIDGVIVDLVQEITEAVYD 337 (361)
Q Consensus 285 ~~~~v~~~~~~Gl~v~~w~T------vn~~~~~~~~~~~~GVdgI~TD~p~~~~~~l~~ 337 (361)
-++.++.+|++|+.|++. . -.+...+.++ ...++|||+|=.+..+..+.+.
T Consensus 45 L~~iv~~ik~~gK~vivh-~DlI~GLs~d~~ai~fL-~~~~pdGIIsTk~~~i~~Akk~ 101 (188)
T 1vkf_A 45 LKFHLKILKDRGKTVFVD-MDFVNGLGEGEEAILFV-KKAGADGIITIKPKNYVVAKKN 101 (188)
T ss_dssp HHHHHHHHHHTTCEEEEE-GGGEETCCSSHHHHHHH-HHHTCSEEEESCHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCeEEEe-cCcccccCCCHHHHHHH-HhcCCCEEEcCcHHHHHHHHHc
Confidence 478999999999999987 3 2355556666 6789999999999998877653
No 55
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=66.95 E-value=8.5 Score=34.33 Aligned_cols=80 Identities=14% Similarity=0.165 Sum_probs=47.5
Q ss_pred cHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccCCC-HHHHHHHHHh----------cCccEEEeCC
Q 040734 259 SLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNN-VAEAVYMQHL----------MGIDGVIVDL 327 (361)
Q Consensus 259 ~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~-~~~~~~~~~~----------~GVdgI~TD~ 327 (361)
.++...+.+.+.|++++.+.---.--..++.+.++++|+.+....+.++ .+.++..... +||.|.-+..
T Consensus 104 G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY~Vs~~GvTG~~~~~ 183 (252)
T 3tha_A 104 GLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFIYLLASIGITGTKSVE 183 (252)
T ss_dssp CHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCEEEECCSCSSSCSHHH
T ss_pred hHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeEEEEecCCCCCcccCC
Confidence 3566777888999998875531111246788889999998765434444 4445544311 2455554444
Q ss_pred hHHHHHHHHHh
Q 040734 328 VQEITEAVYDM 338 (361)
Q Consensus 328 p~~~~~~l~~~ 338 (361)
+..+.+++++.
T Consensus 184 ~~~~~~~v~~v 194 (252)
T 3tha_A 184 EAILQDKVKEI 194 (252)
T ss_dssp HHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 44555555543
No 56
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=66.85 E-value=18 Score=33.82 Aligned_cols=43 Identities=16% Similarity=0.124 Sum_probs=30.9
Q ss_pred hHHHHHHHHcCCEEEEeccC-----C--------CHHHHHHHHHhcCccEEEeCCh
Q 040734 286 PGAVTKIKESKLSLLTYGRL-----N--------NVAEAVYMQHLMGIDGVIVDLV 328 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tv-----n--------~~~~~~~~~~~~GVdgI~TD~p 328 (361)
+.+++++|++|+++..|... . ..+...+.+.++|||+|=.|+.
T Consensus 77 ~~l~~~ih~~Glk~Giw~~~~~~~~~~~~pg~~~~~~~~~~~~~~wGvdyvK~D~~ 132 (362)
T 1uas_A 77 KALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLDHEEQDVKTFASWGVDYLKYDNC 132 (362)
T ss_dssp HHHHHHHHHTTCEEEEEEESSSBCTTSSSBCCTTCHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHHHHCCCEeEEEeeCCCccccCCCCCchhHHHHHHHHHHHcCCCEEEECcc
Confidence 47899999999999998421 1 2233334445799999999984
No 57
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=66.48 E-value=17 Score=33.49 Aligned_cols=62 Identities=19% Similarity=0.283 Sum_probs=48.5
Q ss_pred HHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 260 LEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
+.+.++.+...+++.+.++... .+++++.+++.|++|.+ .+.+.+++.++. ..|+|+|+.+.
T Consensus 91 ~~~~~~~~~~~g~d~V~l~~g~---p~~~~~~l~~~g~~v~~--~v~s~~~a~~a~-~~GaD~i~v~g 152 (326)
T 3bo9_A 91 ADDLVKVCIEEKVPVVTFGAGN---PTKYIRELKENGTKVIP--VVASDSLARMVE-RAGADAVIAEG 152 (326)
T ss_dssp HHHHHHHHHHTTCSEEEEESSC---CHHHHHHHHHTTCEEEE--EESSHHHHHHHH-HTTCSCEEEEC
T ss_pred HHHHHHHHHHCCCCEEEECCCC---cHHHHHHHHHcCCcEEE--EcCCHHHHHHHH-HcCCCEEEEEC
Confidence 4556677778899988876653 57899999999998875 367888887775 69999998854
No 58
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=66.34 E-value=17 Score=31.83 Aligned_cols=80 Identities=9% Similarity=0.043 Sum_probs=52.8
Q ss_pred cHHHHHHHHHhcCCcEEEcCC---c---cccCChHHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhcCccEEE------e
Q 040734 259 SLEEAVKVCLEGGLQGIVSEV---K---GVFRNPGAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLMGIDGVI------V 325 (361)
Q Consensus 259 ~l~~~~~~~~~~~~~~i~~~~---~---~~~~~~~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~------T 325 (361)
.+.+.++.+ +.++++++++. . .+..-+..++.+++. .+.+-+---+++++.+.+.+.+.|+|+|+ +
T Consensus 14 ~l~~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~~~~~dvhLmv~dp~~~i~~~~~aGAd~itvh~Ea~~ 92 (231)
T 3ctl_A 14 KFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARAGADFITLHPETIN 92 (231)
T ss_dssp GHHHHHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTCCSCEEEEEESSCGGGTHHHHHHHTCSEEEECGGGCT
T ss_pred hHHHHHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEECcccCC
Confidence 467777777 78888776653 1 122347899999885 34443332356676644444479999998 7
Q ss_pred CChHHHHHHHHHhc
Q 040734 326 DLVQEITEAVYDMI 339 (361)
Q Consensus 326 D~p~~~~~~l~~~~ 339 (361)
+.+.++.+..++.+
T Consensus 93 ~~~~~~i~~i~~~G 106 (231)
T 3ctl_A 93 GQAFRLIDEIRRHD 106 (231)
T ss_dssp TTHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHcC
Confidence 77887877777654
No 59
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=66.20 E-value=55 Score=30.30 Aligned_cols=66 Identities=21% Similarity=0.371 Sum_probs=47.0
Q ss_pred HHHHHHHhcCCcEEEcCCccc-------------cCChHHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEeC
Q 040734 262 EAVKVCLEGGLQGIVSEVKGV-------------FRNPGAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD 326 (361)
Q Consensus 262 ~~~~~~~~~~~~~i~~~~~~~-------------~~~~~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD 326 (361)
+..+.+.+.|+++++++.... ..+-+++..+++. ++.|++-|-+.+.+++.+++ . |+|+|+.-
T Consensus 148 ~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l-~-GaD~V~iG 225 (350)
T 3b0p_A 148 QSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHL-K-RVDGVMLG 225 (350)
T ss_dssp HHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHH-T-TSSEEEEC
T ss_pred HHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHH-h-CCCEEEEC
Confidence 344555677887777654321 0134677888775 79999988899999999987 5 99999987
Q ss_pred ChH
Q 040734 327 LVQ 329 (361)
Q Consensus 327 ~p~ 329 (361)
++-
T Consensus 226 Ra~ 228 (350)
T 3b0p_A 226 RAV 228 (350)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 60
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=65.97 E-value=27 Score=30.45 Aligned_cols=41 Identities=22% Similarity=0.190 Sum_probs=34.9
Q ss_pred ChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeC
Q 040734 285 NPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD 326 (361)
Q Consensus 285 ~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD 326 (361)
+.++++.+++.++.|++=|-+++++++.+++ .+|+|||+.-
T Consensus 170 ~~~~i~~l~~~~ipvIA~GGI~t~~d~~~~~-~~GadgV~VG 210 (232)
T 3igs_A 170 DLPLVKALHDAGCRVIAEGRYNSPALAAEAI-RYGAWAVTVG 210 (232)
T ss_dssp CHHHHHHHHHTTCCEEEESCCCSHHHHHHHH-HTTCSEEEEC
T ss_pred CHHHHHHHHhcCCcEEEECCCCCHHHHHHHH-HcCCCEEEEe
Confidence 4577888887799999988899999999987 6999999854
No 61
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=65.89 E-value=25 Score=34.27 Aligned_cols=92 Identities=14% Similarity=0.168 Sum_probs=61.1
Q ss_pred CHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcc------------ccCChHHHHH-
Q 040734 225 QPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKG------------VFRNPGAVTK- 291 (361)
Q Consensus 225 ~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~------------~~~~~~~v~~- 291 (361)
..+.++.+++..|++|+..-.. .+.+++ ..+.+.|++++.+.... -..+...+..
T Consensus 265 ~~e~i~~i~~~~p~~pvi~g~~-----------~t~e~a-~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v 332 (494)
T 1vrd_A 265 VIETLEMIKADYPDLPVVAGNV-----------ATPEGT-EALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMEC 332 (494)
T ss_dssp HHHHHHHHHHHCTTSCEEEEEE-----------CSHHHH-HHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCceEEeCCc-----------CCHHHH-HHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHH
Confidence 4578889999988888754211 123443 45557899988763210 0011222233
Q ss_pred ---HHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCChH
Q 040734 292 ---IKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQ 329 (361)
Q Consensus 292 ---~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~ 329 (361)
+++.+++|++-|-+.+..++.+++ .+|+|+|..-++-
T Consensus 333 ~~~~~~~~ipvia~GGI~~~~di~kal-a~GAd~V~iGr~~ 372 (494)
T 1vrd_A 333 SEVARKYDVPIIADGGIRYSGDIVKAL-AAGAESVMVGSIF 372 (494)
T ss_dssp HHHHHTTTCCEEEESCCCSHHHHHHHH-HTTCSEEEESHHH
T ss_pred HHHHhhcCCCEEEECCcCCHHHHHHHH-HcCCCEEEECHHH
Confidence 333489999988899999999997 6999999977664
No 62
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=65.54 E-value=27 Score=30.01 Aligned_cols=65 Identities=22% Similarity=0.140 Sum_probs=41.9
Q ss_pred cHHHHHHHHHhcCCcEEEcCC------ccccCChHHHHHHHHc-CCEEEEeccCCCHHH-HHHHHHhcCccEEE
Q 040734 259 SLEEAVKVCLEGGLQGIVSEV------KGVFRNPGAVTKIKES-KLSLLTYGRLNNVAE-AVYMQHLMGIDGVI 324 (361)
Q Consensus 259 ~l~~~~~~~~~~~~~~i~~~~------~~~~~~~~~v~~~~~~-Gl~v~~w~Tvn~~~~-~~~~~~~~GVdgI~ 324 (361)
.+.+.++.+.+.|++.+.+.. .......+.++.+++. +..+.+-..+|++++ ++.+ ...|+|+|+
T Consensus 24 ~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~~~~~~v~l~vnd~~~~v~~~-~~~Gad~v~ 96 (230)
T 1rpx_A 24 KLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIVEPDQRVPDF-IKAGADIVS 96 (230)
T ss_dssp GHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGCCSCEEEEEESSSHHHHHHHH-HHTTCSEEE
T ss_pred HHHHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhccCCcEEEEEEecCHHHHHHHH-HHcCCCEEE
Confidence 456677777788888777642 1111246889999876 544433324788764 4445 469999996
No 63
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=65.42 E-value=24 Score=31.22 Aligned_cols=69 Identities=16% Similarity=0.075 Sum_probs=47.9
Q ss_pred cCCHHHHHHHHHHCCCCCEEE-EccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEE
Q 040734 223 TFQPDAAVLIRKLQSTYPVFF-LTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLT 301 (361)
Q Consensus 223 Sf~~~~l~~l~~~~p~~~~~~-l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~ 301 (361)
+|.+..++.+|+..|+.+.-. +.-.. ....++.+.+.|++++.++.....-..+.++.+|+.|+++.+
T Consensus 71 t~G~~~v~~lr~~~p~~~ldvHLmv~~-----------p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gv 139 (246)
T 3inp_A 71 TFGPMVLKALRDYGITAGMDVHLMVKP-----------VDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGL 139 (246)
T ss_dssp CCCHHHHHHHHHHTCCSCEEEEEECSS-----------CHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEE
T ss_pred hcCHHHHHHHHHhCCCCeEEEEEeeCC-----------HHHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEE
Confidence 789999999999987877643 33211 122344556789999988765421124789999999999876
Q ss_pred e
Q 040734 302 Y 302 (361)
Q Consensus 302 w 302 (361)
=
T Consensus 140 a 140 (246)
T 3inp_A 140 A 140 (246)
T ss_dssp E
T ss_pred E
Confidence 4
No 64
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=64.83 E-value=42 Score=30.71 Aligned_cols=97 Identities=12% Similarity=0.181 Sum_probs=60.3
Q ss_pred HHHHHHHHHC--------CCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccc----------------
Q 040734 227 DAAVLIRKLQ--------STYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGV---------------- 282 (361)
Q Consensus 227 ~~l~~l~~~~--------p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~---------------- 282 (361)
+.++.+++.. +++|+..=.... +....+.+..+.+.+.|+++|.+.....
T Consensus 192 ~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~------~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg 265 (336)
T 1f76_A 192 DLLTAIKNKQNDLQAMHHKYVPIAVKIAPD------LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGG 265 (336)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCCEEEECCSC------CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSE
T ss_pred HHHHHHHHHHHhhhhcccccCceEEEecCC------CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCC
Confidence 5566666554 367776543221 1111234445666778888887653210
Q ss_pred c-------CChHHHHHHHHc---CCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHH
Q 040734 283 F-------RNPGAVTKIKES---KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQE 330 (361)
Q Consensus 283 ~-------~~~~~v~~~~~~---Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~ 330 (361)
+ ..-+.+..+++. ++.|++=|-|.+.+++.+++ ..|+|+|+.-++-.
T Consensus 266 ~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l-~~GAd~V~igr~~l 322 (336)
T 1f76_A 266 LSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKI-AAGASLVQIYSGFI 322 (336)
T ss_dssp EEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHH-HHTCSEEEESHHHH
T ss_pred cCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHH-HCCCCEEEeeHHHH
Confidence 0 011556666664 78999888899999999998 58999998755543
No 65
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=64.74 E-value=28 Score=30.28 Aligned_cols=41 Identities=24% Similarity=0.217 Sum_probs=34.9
Q ss_pred ChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeC
Q 040734 285 NPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD 326 (361)
Q Consensus 285 ~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD 326 (361)
+-++++.+++.++.|++=|-+++++++.+++ .+|+|||+.-
T Consensus 170 ~~~li~~l~~~~ipvIA~GGI~t~~d~~~~~-~~GadgV~VG 210 (229)
T 3q58_A 170 DLAMVTQLSHAGCRVIAEGRYNTPALAANAI-EHGAWAVTVG 210 (229)
T ss_dssp CHHHHHHHHTTTCCEEEESSCCSHHHHHHHH-HTTCSEEEEC
T ss_pred CHHHHHHHHHcCCCEEEECCCCCHHHHHHHH-HcCCCEEEEc
Confidence 4477888877799999998899999999987 6999999964
No 66
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=64.48 E-value=71 Score=29.29 Aligned_cols=112 Identities=13% Similarity=0.032 Sum_probs=66.9
Q ss_pred HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccc-----c----CChHHHHHHHHc-
Q 040734 226 PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGV-----F----RNPGAVTKIKES- 295 (361)
Q Consensus 226 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~-----~----~~~~~v~~~~~~- 295 (361)
.++++.+++.. ++|+++=..........+......+..+.+.+.|++++++..... . ...++++.+++.
T Consensus 198 ~eiv~avr~~v-~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~ 276 (338)
T 1z41_A 198 REIIDEVKQVW-DGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA 276 (338)
T ss_dssp HHHHHHHHHHC-CSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC
Confidence 46667777766 677765443321000011111123334445677888887643210 0 123566667654
Q ss_pred CCEEEEeccCCCHHHHHHHHHhcC-ccEEEeCC-----hHHHHHHHHHhc
Q 040734 296 KLSLLTYGRLNNVAEAVYMQHLMG-IDGVIVDL-----VQEITEAVYDMI 339 (361)
Q Consensus 296 Gl~v~~w~Tvn~~~~~~~~~~~~G-VdgI~TD~-----p~~~~~~l~~~~ 339 (361)
++.|++=|-+.+.+++.+++ ..| +|+|.--+ |+...++.+.+.
T Consensus 277 ~iPVi~~Ggi~s~~~a~~~l-~~G~aD~V~iGR~~i~nPdl~~ki~~~~~ 325 (338)
T 1z41_A 277 DMATGAVGMITDGSMAEEIL-QNGRADLIFIGRELLRDPFFARTAAKQLN 325 (338)
T ss_dssp CCEEEECSSCCSHHHHHHHH-HTTSCSEEEECHHHHHCTTHHHHHHHHTT
T ss_pred CCCEEEECCCCCHHHHHHHH-HcCCceEEeecHHHHhCchHHHHHHcCCC
Confidence 78998887899999999997 577 99998654 666666666553
No 67
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=64.45 E-value=36 Score=30.81 Aligned_cols=70 Identities=13% Similarity=0.043 Sum_probs=50.4
Q ss_pred HhcCCcEEEcCCccccCChHHHHHHHHc---CCEEEEeccCCCHHHHHHHHHhcCccEEEeCC-------hHHHHHHHHH
Q 040734 268 LEGGLQGIVSEVKGVFRNPGAVTKIKES---KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL-------VQEITEAVYD 337 (361)
Q Consensus 268 ~~~~~~~i~~~~~~~~~~~~~v~~~~~~---Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~-------p~~~~~~l~~ 337 (361)
..+|+..+-++......+.++|+++++. ++.+.+=|-|.+.+++++++ ..|+|+|++.. |+.+.++..+
T Consensus 196 ad~G~~lV~LD~~~~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll-~aGAD~VVVGSAav~d~~Pelv~e~a~~ 274 (286)
T 3vk5_A 196 RAFGFHMVYLYSRNEHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYL-DSGADYVGFAGALEQPDWRSALAEIAGR 274 (286)
T ss_dssp HHTTCSEEEEECSSSCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHH-HTTCSEEEESGGGSSTTHHHHHHHHHC-
T ss_pred HHcCCCEEEEcCCCCcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHH-HcCCCEEEECchhhcCCCHHHHHHHHHh
Confidence 4556666655554434577999999875 58887776899999999997 69999999754 5666666655
Q ss_pred h
Q 040734 338 M 338 (361)
Q Consensus 338 ~ 338 (361)
+
T Consensus 275 ~ 275 (286)
T 3vk5_A 275 R 275 (286)
T ss_dssp -
T ss_pred C
Confidence 4
No 68
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=64.31 E-value=15 Score=32.76 Aligned_cols=140 Identities=13% Similarity=0.062 Sum_probs=84.5
Q ss_pred CHHHHHHhCCCCceEEEEEecCCccc---hhhhHHHHHHHHHHHHHHHhcCCCCEEE------EcCCHHHHHHHHHHCCC
Q 040734 168 TLQEAFQQVDPNVGFNVELKFDDHIV---YEQDYLIRVIQAILKIVFEFAENRPIIF------STFQPDAAVLIRKLQST 238 (361)
Q Consensus 168 tL~EvL~~~~~~~~l~iEiK~~~~~~---~~~~~~~~~v~~vl~~l~~~~~~~rv~~------~Sf~~~~l~~l~~~~p~ 238 (361)
.|.++|..- +...++.|+|..++.. .+..+...++.. ..+. ..-+-+ ..-+.+.|+.+++.. +
T Consensus 30 ~f~~al~~~-~~~~vIaE~K~aSPSkG~i~~~~~~~~iA~~----y~~~--A~~IsVlTd~~~F~gs~~dL~~ir~~v-~ 101 (251)
T 1i4n_A 30 RFLEVLSGK-ERVKIIAEFKKASPSAGDINADASLEDFIRM----YDEL--ADAISILTEKHYFKGDPAFVRAARNLT-C 101 (251)
T ss_dssp HHHHHHCCS-SSCEEEEEECSBCSSSCBSCTTCCHHHHHHH----HHHH--CSEEEEECCCSSSCCCTHHHHHHHTTC-C
T ss_pred CHHHHHhhC-CCceEEEeecCCCCCCCccCCCCCHHHHHHH----HHHh--CCceEEEecccccCCCHHHHHHHHHhC-C
Confidence 466666421 2388999999765431 000111222222 2222 221222 113677888888764 7
Q ss_pred CCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcccc--CChHHHHHHHHcCCEEEEeccCCCHHHHHHHHH
Q 040734 239 YPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVF--RNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQH 316 (361)
Q Consensus 239 ~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~--~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~ 316 (361)
+|+..=- +-...+ + +..++..|++++.+....+. .-.++++.+|+.|+.+.+= +++.+++.+.+
T Consensus 102 lPvLrKD---------fi~~~~-q-i~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lGl~~lvE--v~~~eE~~~A~- 167 (251)
T 1i4n_A 102 RPILAKD---------FYIDTV-Q-VKLASSVGADAILIIARILTAEQIKEIYEAAEELGMDSLVE--VHSREDLEKVF- 167 (251)
T ss_dssp SCEEEEC---------CCCSTH-H-HHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTTCEEEEE--ECSHHHHHHHH-
T ss_pred CCEEEee---------CCCCHH-H-HHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHcCCeEEEE--eCCHHHHHHHH-
Confidence 7875221 111223 2 23377899999887766431 1257889999999999998 68889998886
Q ss_pred hc-CccEEEeCChH
Q 040734 317 LM-GIDGVIVDLVQ 329 (361)
Q Consensus 317 ~~-GVdgI~TD~p~ 329 (361)
.+ |+|.|-+|..+
T Consensus 168 ~l~g~~iIGinnr~ 181 (251)
T 1i4n_A 168 SVIRPKIIGINTRD 181 (251)
T ss_dssp TTCCCSEEEEECBC
T ss_pred hcCCCCEEEEeCcc
Confidence 69 99999776644
No 69
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=64.07 E-value=17 Score=33.58 Aligned_cols=62 Identities=21% Similarity=0.354 Sum_probs=48.7
Q ss_pred HHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 260 LEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
+.+.++.+...+++++.++... ..++++.+++.|+.|.+- +.+.+++..+. ..|+|+|+.+-
T Consensus 77 ~~~~~~~a~~~g~d~V~~~~g~---p~~~i~~l~~~g~~v~~~--v~~~~~a~~~~-~~GaD~i~v~g 138 (332)
T 2z6i_A 77 VEDIVDLVIEEGVKVVTTGAGN---PSKYMERFHEAGIIVIPV--VPSVALAKRME-KIGADAVIAEG 138 (332)
T ss_dssp HHHHHHHHHHTTCSEEEECSSC---GGGTHHHHHHTTCEEEEE--ESSHHHHHHHH-HTTCSCEEEEC
T ss_pred HHHHHHHHHHCCCCEEEECCCC---hHHHHHHHHHcCCeEEEE--eCCHHHHHHHH-HcCCCEEEEEC
Confidence 5566778888999999887653 468899999999888754 67788877775 69999998853
No 70
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=63.65 E-value=8.8 Score=34.37 Aligned_cols=126 Identities=15% Similarity=0.218 Sum_probs=75.1
Q ss_pred ccCHHHHHHhCC-------CCceEEEEEecCCccchhhhHHHHHHHHHHHHHHHhcCCCCEE-EEcCCHHHHHHHHHHCC
Q 040734 166 LCTLQEAFQQVD-------PNVGFNVELKFDDHIVYEQDYLIRVIQAILKIVFEFAENRPII-FSTFQPDAAVLIRKLQS 237 (361)
Q Consensus 166 iptL~EvL~~~~-------~~~~l~iEiK~~~~~~~~~~~~~~~v~~vl~~l~~~~~~~rv~-~~Sf~~~~l~~l~~~~p 237 (361)
--|-+|++...+ ..-++-||+=......++ +....+++ .+.+.+.|+ .++ +++-++...+.+.+.-+
T Consensus 83 ~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llp--D~~~tv~a-a~~L~~~Gf--~Vlpy~~dd~~~akrl~~~G~ 157 (265)
T 1wv2_A 83 CYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFP--NVVETLKA-AEQLVKDGF--DVMVYTSDDPIIARQLAEIGC 157 (265)
T ss_dssp CCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCB--CHHHHHHH-HHHHHTTTC--EEEEEECSCHHHHHHHHHSCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCc--CHHHHHHH-HHHHHHCCC--EEEEEeCCCHHHHHHHHHhCC
Confidence 345556554432 234888888865432222 12233333 233333443 355 57788888888877655
Q ss_pred CCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHc-CCEEEEeccCCCHHHHHHHHH
Q 040734 238 TYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKES-KLSLLTYGRLNNVAEAVYMQH 316 (361)
Q Consensus 238 ~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~ 316 (361)
.+- .-.+. ..|- + .. +.++++|+.+++. +++|++=+-+.+++++..++
T Consensus 158 ~aV---mPlg~--------------------pIGs-G----~G--i~~~~lI~~I~e~~~vPVI~eGGI~TPsDAa~Am- 206 (265)
T 1wv2_A 158 IAV---MPLAG--------------------LIGS-G----LG--ICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAM- 206 (265)
T ss_dssp SEE---EECSS--------------------STTC-C----CC--CSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHH-
T ss_pred CEE---EeCCc--------------------cCCC-C----CC--cCCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-
Confidence 432 11010 0111 0 01 1368889998886 78999888899999999997
Q ss_pred hcCccEEEeCC
Q 040734 317 LMGIDGVIVDL 327 (361)
Q Consensus 317 ~~GVdgI~TD~ 327 (361)
++|+|||+.+.
T Consensus 207 eLGAdgVlVgS 217 (265)
T 1wv2_A 207 ELGCEAVLMNT 217 (265)
T ss_dssp HHTCSEEEESH
T ss_pred HcCCCEEEECh
Confidence 69999999765
No 71
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=62.71 E-value=83 Score=29.17 Aligned_cols=91 Identities=12% Similarity=-0.005 Sum_probs=59.7
Q ss_pred HHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcc------------ccCC----hHHHH
Q 040734 227 DAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKG------------VFRN----PGAVT 290 (361)
Q Consensus 227 ~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~------------~~~~----~~~v~ 290 (361)
+.++++++..|++|+..-.- .+.++ ...+.+.|+++|.+.... -..+ ++..+
T Consensus 150 ~~i~~lr~~~~~~~vi~g~v-----------~t~e~-A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~ 217 (351)
T 2c6q_A 150 EFVKDVRKRFPQHTIMAGNV-----------VTGEM-VEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECAD 217 (351)
T ss_dssp HHHHHHHHHCTTSEEEEEEE-----------CSHHH-HHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCeEEEEeC-----------CCHHH-HHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHH
Confidence 46778888887777653211 12333 345568899988553210 0001 24444
Q ss_pred HHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHH
Q 040734 291 KIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQE 330 (361)
Q Consensus 291 ~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~ 330 (361)
.++..++.|++=|-+.+..++.+++ .+|+|+|..-.+-.
T Consensus 218 ~~~~~~ipvIa~GGI~~g~di~kAl-alGA~~V~vG~~fl 256 (351)
T 2c6q_A 218 AAHGLKGHIISDGGCSCPGDVAKAF-GAGADFVMLGGMLA 256 (351)
T ss_dssp HHHHTTCEEEEESCCCSHHHHHHHH-HTTCSEEEESTTTT
T ss_pred HHhhcCCcEEEeCCCCCHHHHHHHH-HcCCCceeccHHHh
Confidence 4455689999988899999999997 69999999877654
No 72
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=62.40 E-value=20 Score=35.08 Aligned_cols=89 Identities=11% Similarity=0.139 Sum_probs=59.3
Q ss_pred HHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcc-----------c-cCC----hHHHH
Q 040734 227 DAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKG-----------V-FRN----PGAVT 290 (361)
Q Consensus 227 ~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~-----------~-~~~----~~~v~ 290 (361)
+.++.+++..|+.|+..-.- .+.+. .+.+.+.|++++.+.+.. . ..+ .+..+
T Consensus 259 ~~v~~i~~~~p~~~Vi~g~v-----------~t~e~-a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~ 326 (490)
T 4avf_A 259 ERVRWVKQTFPDVQVIGGNI-----------ATAEA-AKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAA 326 (490)
T ss_dssp HHHHHHHHHCTTSEEEEEEE-----------CSHHH-HHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCceEEEeee-----------CcHHH-HHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHH
Confidence 78888999888887765211 12333 345667899988752110 0 001 23333
Q ss_pred HHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCCh
Q 040734 291 KIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLV 328 (361)
Q Consensus 291 ~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p 328 (361)
.+++.+++|++-|-+.+..++.+++ .+|+|+|+.-..
T Consensus 327 ~~~~~~iPVIa~GGI~~~~di~kal-~~GAd~V~vGs~ 363 (490)
T 4avf_A 327 ALEGTGVPLIADGGIRFSGDLAKAM-VAGAYCVMMGSM 363 (490)
T ss_dssp HHTTTTCCEEEESCCCSHHHHHHHH-HHTCSEEEECTT
T ss_pred HhccCCCcEEEeCCCCCHHHHHHHH-HcCCCeeeecHH
Confidence 4445589999988899999999987 699999997754
No 73
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=61.44 E-value=26 Score=32.92 Aligned_cols=89 Identities=12% Similarity=0.103 Sum_probs=54.8
Q ss_pred HHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCC---cc---------ccCChHHHHHH--
Q 040734 227 DAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEV---KG---------VFRNPGAVTKI-- 292 (361)
Q Consensus 227 ~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~---~~---------~~~~~~~v~~~-- 292 (361)
+.++++++..|++++..-.- .+.+++ ..+.+.|++++.+.. .. -...-..+..+
T Consensus 138 ~~I~~ik~~~p~v~Vi~G~v-----------~t~e~A-~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~ 205 (366)
T 4fo4_A 138 QRIRETRAAYPHLEIIGGNV-----------ATAEGA-RALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAG 205 (366)
T ss_dssp HHHHHHHHHCTTCEEEEEEE-----------CSHHHH-HHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCceEeeee-----------CCHHHH-HHHHHcCCCEEEEecCCCCCCCcccccCcccchHHHHHHHHH
Confidence 34567777778877643211 123333 334567888877621 00 00111223333
Q ss_pred --HHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCCh
Q 040734 293 --KESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLV 328 (361)
Q Consensus 293 --~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p 328 (361)
+..+++|++-|-+.+..++.+++ .+|+|+|+.-..
T Consensus 206 ~~~~~~iPVIA~GGI~~~~di~kal-a~GAd~V~vGs~ 242 (366)
T 4fo4_A 206 VANEYGIPVIADGGIRFSGDISKAI-AAGASCVMVGSM 242 (366)
T ss_dssp HHGGGTCCEEEESCCCSHHHHHHHH-HTTCSEEEESTT
T ss_pred HHhhcCCeEEEeCCCCCHHHHHHHH-HcCCCEEEEChH
Confidence 35689999988899999998887 699999987653
No 74
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=61.24 E-value=56 Score=25.39 Aligned_cols=119 Identities=9% Similarity=0.103 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCc
Q 040734 201 RVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVK 280 (361)
Q Consensus 201 ~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~ 280 (361)
.+...+.+.+.+.+ .++++.-.+++.++.+++. +++..+ .... -.+.+..+.-.+++.+.....
T Consensus 17 ~~G~~la~~L~~~g--~~v~vid~~~~~~~~~~~~--g~~~i~--gd~~----------~~~~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 17 RVGSLLGEKLLASD--IPLVVIETSRTRVDELRER--GVRAVL--GNAA----------NEEIMQLAHLECAKWLILTIP 80 (140)
T ss_dssp HHHHHHHHHHHHTT--CCEEEEESCHHHHHHHHHT--TCEEEE--SCTT----------SHHHHHHTTGGGCSEEEECCS
T ss_pred HHHHHHHHHHHHCC--CCEEEEECCHHHHHHHHHc--CCCEEE--CCCC----------CHHHHHhcCcccCCEEEEECC
Confidence 45666777777665 3688888999998888763 444322 1111 111112221223455543332
Q ss_pred cccCChHHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHHHHHHHHHh
Q 040734 281 GVFRNPGAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEITEAVYDM 338 (361)
Q Consensus 281 ~~~~~~~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~~l~~~ 338 (361)
....+...+..+++. +.++++- ++++.....+. .+|+|.|+.-.-.......+..
T Consensus 81 ~~~~n~~~~~~a~~~~~~~~iiar--~~~~~~~~~l~-~~G~d~vi~p~~~~a~~i~~~l 137 (140)
T 3fwz_A 81 NGYEAGEIVASARAKNPDIEIIAR--AHYDDEVAYIT-ERGANQVVMGEREIARTMLELL 137 (140)
T ss_dssp CHHHHHHHHHHHHHHCSSSEEEEE--ESSHHHHHHHH-HTTCSEEEEHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHCCCCeEEEE--ECCHHHHHHHH-HCCCCEEECchHHHHHHHHHHh
Confidence 211123345566665 4566655 67777776664 6999999964444444444443
No 75
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=61.21 E-value=46 Score=28.30 Aligned_cols=61 Identities=15% Similarity=0.116 Sum_probs=47.2
Q ss_pred HHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHH
Q 040734 262 EAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQE 330 (361)
Q Consensus 262 ~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~ 330 (361)
+-.+.+...|+++++... .+.+.++.+++.|+.++.- +.+++++.+.. ..|+|.|.- +|..
T Consensus 74 d~~~~A~~~GAd~v~~~~----~d~~v~~~~~~~g~~~i~G--~~t~~e~~~A~-~~Gad~v~~-fpa~ 134 (207)
T 2yw3_A 74 KEAEAALEAGAAFLVSPG----LLEEVAALAQARGVPYLPG--VLTPTEVERAL-ALGLSALKF-FPAE 134 (207)
T ss_dssp HHHHHHHHHTCSEEEESS----CCHHHHHHHHHHTCCEEEE--ECSHHHHHHHH-HTTCCEEEE-TTTT
T ss_pred HHHHHHHHcCCCEEEcCC----CCHHHHHHHHHhCCCEEec--CCCHHHHHHHH-HCCCCEEEE-ecCc
Confidence 445677788999998663 2788899999999887653 56788888876 699999877 7743
No 76
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=60.02 E-value=1e+02 Score=28.09 Aligned_cols=112 Identities=17% Similarity=0.217 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEcCC-------H----HHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHh
Q 040734 201 RVIQAILKIVFEFAENRPIIFSTFQ-------P----DAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLE 269 (361)
Q Consensus 201 ~~v~~vl~~l~~~~~~~rv~~~Sf~-------~----~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~ 269 (361)
..++.+++..++.+ .+++++... . .+++.+.+..+.+|+++=.+-+. ++ +.+..+.+
T Consensus 28 e~~~avi~AAee~~--sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~~VPValHLDHg~---------~~-e~~~~ai~ 95 (307)
T 3n9r_A 28 EMLNAIFEAGNEEN--SPLFIQASEGAIKYMGIDMAVGMVKIMCERYPHIPVALHLDHGT---------TF-ESCEKAVK 95 (307)
T ss_dssp HHHHHHHHHHHHHT--CCEEEEEEHHHHHHHCHHHHHHHHHHHHHHSTTSCEEEEEEEEC---------SH-HHHHHHHH
T ss_pred HHHHHHHHHHHHhC--CCEEEEcChhhhhhCCHHHHHHHHHHHHHhcCCCcEEEECCCCC---------CH-HHHHHHHH
Confidence 45666777666654 467776432 1 22233334447889876544322 23 33444567
Q ss_pred cCCcEEEcCCccc------cCChHHHHHHHHcCCEEEE-ecc----------------CCCHHHHHHHHHhcCccEEE
Q 040734 270 GGLQGIVSEVKGV------FRNPGAVTKIKESKLSLLT-YGR----------------LNNVAEAVYMQHLMGIDGVI 324 (361)
Q Consensus 270 ~~~~~i~~~~~~~------~~~~~~v~~~~~~Gl~v~~-w~T----------------vn~~~~~~~~~~~~GVdgI~ 324 (361)
.|+..+-++.+.+ -.+.++++.+|+.|+.|=+ -|. .-+|++..++....|||.+-
T Consensus 96 ~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaELG~igG~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LA 173 (307)
T 3n9r_A 96 AGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFVKESQVDYLA 173 (307)
T ss_dssp HTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCC----------CCSCCHHHHHHHHHHHCCSEEE
T ss_pred hCCCcEEEECCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcccccccccCCCHHHHHHHHHHHCCCEEE
Confidence 8999988887653 2467999999999988832 111 12678888877668888663
No 77
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=59.74 E-value=86 Score=27.28 Aligned_cols=75 Identities=20% Similarity=0.146 Sum_probs=50.1
Q ss_pred HHHHHHHH---hcCCcEEEcCCccccCChHHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEeCC-----hHH
Q 040734 261 EEAVKVCL---EGGLQGIVSEVKGVFRNPGAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL-----VQE 330 (361)
Q Consensus 261 ~~~~~~~~---~~~~~~i~~~~~~~~~~~~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~-----p~~ 330 (361)
+++..++. .+++..+-+.+.....+.++++++++. ++++.+=|-+++++++++++ .|+|+|+... |+.
T Consensus 140 e~~~~~a~~a~~~g~~~VYld~sG~~~~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~--~gAD~VVVGSa~v~~p~~ 217 (228)
T 3vzx_A 140 DDIVAYARVSELLQLPIFYLEYSGVLGDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA--EHADVIVVGNAVYEDFDR 217 (228)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECTTSCCCHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH--TTCSEEEECTHHHHCHHH
T ss_pred HHHHHHHHHHHHcCCCEEEecCCCCcCCHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH--hCCCEEEEChHHhcCHHH
Confidence 44444443 334444444433333478999999886 58887766899999998885 6999999765 556
Q ss_pred HHHHHHH
Q 040734 331 ITEAVYD 337 (361)
Q Consensus 331 ~~~~l~~ 337 (361)
+.++.+.
T Consensus 218 ~~~~v~a 224 (228)
T 3vzx_A 218 ALKTVAA 224 (228)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666554
No 78
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=59.30 E-value=99 Score=28.18 Aligned_cols=110 Identities=22% Similarity=0.254 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCH-----------HHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHh
Q 040734 201 RVIQAILKIVFEFAENRPIIFSTFQP-----------DAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLE 269 (361)
Q Consensus 201 ~~v~~vl~~l~~~~~~~rv~~~Sf~~-----------~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~ 269 (361)
..++.+++..++.+ .+++++.... ..++.+.+ ..+|+++=.+-+. ++ +.+..+.+
T Consensus 28 e~~~Ail~AAee~~--sPvIlq~s~g~~~y~g~~~~~~~v~~~a~--~~VPValHlDHg~---------~~-e~~~~ai~ 93 (305)
T 1rvg_A 28 EFLQAVLEAAEEQR--SPVILALSEGAMKYGGRALTLMAVELAKE--ARVPVAVHLDHGS---------SY-ESVLRALR 93 (305)
T ss_dssp HHHHHHHHHHHHTT--CCEEEEEEHHHHHHHHHHHHHHHHHHHHH--CSSCEEEEEEEEC---------SH-HHHHHHHH
T ss_pred HHHHHHHHHHHHhC--CCEEEECChhHHhhCCHHHHHHHHHHHHh--CCCcEEEECCCCC---------CH-HHHHHHHH
Confidence 35666666666553 3577664321 22333333 7788876554321 23 33445667
Q ss_pred cCCcEEEcCCccc------cCChHHHHHHHHcCCEEEE-----ecc------------CCCHHHHHHHHHhcCccEEE
Q 040734 270 GGLQGIVSEVKGV------FRNPGAVTKIKESKLSLLT-----YGR------------LNNVAEAVYMQHLMGIDGVI 324 (361)
Q Consensus 270 ~~~~~i~~~~~~~------~~~~~~v~~~~~~Gl~v~~-----w~T------------vn~~~~~~~~~~~~GVdgI~ 324 (361)
.|+..+-++.+.+ -.+.++++.+|+.|+.|=+ -|. .-+|++..++....|||.+-
T Consensus 94 ~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LA 171 (305)
T 1rvg_A 94 AGFTSVMIDKSHEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFMERTGADYLA 171 (305)
T ss_dssp TTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCSCC------CCTTCCCHHHHHHHHHHHCCSEEE
T ss_pred cCCCeeeeCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCccCCccccccccccCCHHHHHHHHHHHCCCEEE
Confidence 8999888776643 2467999999999988732 100 12577777777667887553
No 79
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=59.16 E-value=61 Score=30.32 Aligned_cols=96 Identities=15% Similarity=0.124 Sum_probs=65.9
Q ss_pred cCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCc---cc---cCChHHHHHHHHc-
Q 040734 223 TFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVK---GV---FRNPGAVTKIKES- 295 (361)
Q Consensus 223 Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~---~~---~~~~~~v~~~~~~- 295 (361)
++.++.++.+++.. +.|+..-.. .+. +..+.+.+.|+++|.+... .+ ..+-+.+..+++.
T Consensus 215 ~~~~~~i~~lr~~~-~~PvivK~v-----------~~~-e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v 281 (368)
T 2nli_A 215 KISPRDIEEIAGHS-GLPVFVKGI-----------QHP-EDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERV 281 (368)
T ss_dssp BCCHHHHHHHHHHS-SSCEEEEEE-----------CSH-HHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHc-CCCEEEEcC-----------CCH-HHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHh
Confidence 57788899999876 567654211 122 3345667889999887431 11 1123555555543
Q ss_pred --CCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHHHH
Q 040734 296 --KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEIT 332 (361)
Q Consensus 296 --Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~ 332 (361)
.+.|++-|-|.+..++.+++ .+|+|+|+.-+|-...
T Consensus 282 ~~~ipVia~GGI~~g~D~~kal-alGAd~V~iGr~~l~~ 319 (368)
T 2nli_A 282 NKRVPIVFDSGVRRGEHVAKAL-ASGADVVALGRPVLFG 319 (368)
T ss_dssp TTSSCEEECSSCCSHHHHHHHH-HTTCSEEEECHHHHHH
T ss_pred CCCCeEEEECCCCCHHHHHHHH-HcCCCEEEECHHHHHH
Confidence 58899988899999999997 6999999999876554
No 80
>7odc_A Protein (ornithine decarboxylase); pyridoxal-5'-phosphate, PLP, group IV decarboxylase, polyami parasitical, chemotherapy target, putrescine; HET: PLP; 1.60A {Mus musculus} SCOP: b.49.2.3 c.1.6.1 PDB: 2on3_A 1d7k_A*
Probab=58.98 E-value=1.1e+02 Score=28.97 Aligned_cols=102 Identities=10% Similarity=0.095 Sum_probs=58.4
Q ss_pred CCEEEEcCC--HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHH
Q 040734 217 RPIIFSTFQ--PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKE 294 (361)
Q Consensus 217 ~rv~~~Sf~--~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~ 294 (361)
.++++..-+ ...++.+++..|++...+..... .....++...+.|+ ++.+ .+..-+..+++
T Consensus 38 tP~~v~dl~~l~~n~~~~~~~~~~~~i~yavKAn----------~~~~v~~~l~~~G~-g~dv------aS~~E~~~~~~ 100 (424)
T 7odc_A 38 DAFYVADLGDILKKHLRWLKALPRVTPFYAVKCN----------DSRAIVSTLAAIGT-GFDC------ASKTEIQLVQG 100 (424)
T ss_dssp CCEEEEEHHHHHHHHHHHHHHCTTEEEEEEGGGC----------CCHHHHHHHHHHTC-EEEE------CSHHHHHHHHH
T ss_pred CcEEEeeHHHHHHHHHHHHHhCCCCeEEEEeccC----------CcHHHHHHHHHcCC-cEEE------CCHHHHHHHHH
Confidence 345553332 23455666777765555555432 22344555556665 4432 25555677778
Q ss_pred cCCE---EEEeccCCCHHHHHHHHHhcCccEEEeCChHHHHHHHH
Q 040734 295 SKLS---LLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEITEAVY 336 (361)
Q Consensus 295 ~Gl~---v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~~l~ 336 (361)
+|+. +...+...+.++++.++ ..|+.-+..|....+.++.+
T Consensus 101 ~G~~~~~Ii~~g~~k~~~ei~~a~-~~gv~~~~vds~~el~~l~~ 144 (424)
T 7odc_A 101 LGVPAERVIYANPCKQVSQIKYAA-SNGVQMMTFDSEIELMKVAR 144 (424)
T ss_dssp TTCCGGGEEECCSSCCHHHHHHHH-HTTCCEEEECSHHHHHHHHH
T ss_pred cCCChhhEEECCCCCCHHHHHHHH-HCCCCEEEeCCHHHHHHHHH
Confidence 8864 33332345677777775 58887677888888776544
No 81
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=58.66 E-value=55 Score=28.99 Aligned_cols=69 Identities=16% Similarity=0.194 Sum_probs=48.9
Q ss_pred cHHHHHHHHHhcCCcEEEcCCccccCC----hHHHHHHHHcCCEEEEecc--------CCCHHHHH----HHHHhcCccE
Q 040734 259 SLEEAVKVCLEGGLQGIVSEVKGVFRN----PGAVTKIKESKLSLLTYGR--------LNNVAEAV----YMQHLMGIDG 322 (361)
Q Consensus 259 ~l~~~~~~~~~~~~~~i~~~~~~~~~~----~~~v~~~~~~Gl~v~~w~T--------vn~~~~~~----~~~~~~GVdg 322 (361)
.+++.++.|+++|++.+-++-...-++ .++|+.+++.|++|.+=-- .-++.++. +.+ +.|++.
T Consensus 86 ~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~L-eAGA~~ 164 (251)
T 1qwg_A 86 KFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFMVLTEVGKKMPDKDKQLTIDDRIKLINFDL-DAGADY 164 (251)
T ss_dssp CHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEEECCSSHHHHTTCCHHHHHHHHHHHH-HHTCSE
T ss_pred cHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCEEeeeccccCCcccCCCCHHHHHHHHHHHH-HCCCcE
Confidence 477888999999999988776654333 3789999999999976311 12334433 233 589999
Q ss_pred EEeCCh
Q 040734 323 VIVDLV 328 (361)
Q Consensus 323 I~TD~p 328 (361)
||.+--
T Consensus 165 ViiEar 170 (251)
T 1qwg_A 165 VIIEGR 170 (251)
T ss_dssp EEECCT
T ss_pred EEEeee
Confidence 998764
No 82
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=56.59 E-value=89 Score=26.30 Aligned_cols=40 Identities=8% Similarity=0.069 Sum_probs=31.5
Q ss_pred HHHHHHHH-cCCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 287 GAVTKIKE-SKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 287 ~~v~~~~~-~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
+.++++++ .++.|++=|-+.+.+++.+++ ..|+|+|+.-.
T Consensus 165 ~~~~~~~~~~~ipvia~GGI~~~~~~~~~~-~~Gad~v~vG~ 205 (223)
T 1y0e_A 165 QFLKDVLQSVDAKVIAEGNVITPDMYKRVM-DLGVHCSVVGG 205 (223)
T ss_dssp HHHHHHHHHCCSEEEEESSCCSHHHHHHHH-HTTCSEEEECH
T ss_pred HHHHHHHhhCCCCEEEecCCCCHHHHHHHH-HcCCCEEEECh
Confidence 35556554 379999887898999999987 69999998754
No 83
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=56.59 E-value=26 Score=30.10 Aligned_cols=77 Identities=18% Similarity=0.123 Sum_probs=48.9
Q ss_pred HHHHHHHhcCCcEEEcCCcc-----ccCChHHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhcCccEEEeC-----ChHH
Q 040734 262 EAVKVCLEGGLQGIVSEVKG-----VFRNPGAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD-----LVQE 330 (361)
Q Consensus 262 ~~~~~~~~~~~~~i~~~~~~-----~~~~~~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD-----~p~~ 330 (361)
+..+.+...|++.+++.... .....+.++.+++. ++.+.+-+.++++++++.++ ..|+|+|... .|..
T Consensus 37 ~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~-~~Gad~V~i~~~~~~~~~~ 115 (253)
T 1h5y_A 37 EMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLF-RAGADKVSVNTAAVRNPQL 115 (253)
T ss_dssp HHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHH-HHTCSEEEESHHHHHCTHH
T ss_pred HHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHH-HcCCCEEEEChHHhhCcHH
Confidence 34445556677665543110 00124566667654 78888877899999998886 6899999954 3555
Q ss_pred HHHHHHHhc
Q 040734 331 ITEAVYDMI 339 (361)
Q Consensus 331 ~~~~l~~~~ 339 (361)
+.++.+.+.
T Consensus 116 ~~~~~~~~g 124 (253)
T 1h5y_A 116 VALLAREFG 124 (253)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHcC
Confidence 666666554
No 84
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=56.01 E-value=32 Score=30.24 Aligned_cols=57 Identities=7% Similarity=0.000 Sum_probs=39.0
Q ss_pred HHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeC
Q 040734 265 KVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD 326 (361)
Q Consensus 265 ~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD 326 (361)
+++...|++++++....+ ....++.+...+..+.+ ++++.+++.+.. ..|+|.|...
T Consensus 106 ~lA~~~gAdGVHLg~~dl--~~~~~r~~~~~~~~iG~--S~ht~~Ea~~A~-~~GaDyI~vg 162 (243)
T 3o63_A 106 DIARAAGADVLHLGQRDL--PVNVARQILAPDTLIGR--STHDPDQVAAAA-AGDADYFCVG 162 (243)
T ss_dssp HHHHHHTCSEEEECTTSS--CHHHHHHHSCTTCEEEE--EECSHHHHHHHH-HSSCSEEEEC
T ss_pred HHHHHhCCCEEEecCCcC--CHHHHHHhhCCCCEEEE--eCCCHHHHHHHh-hCCCCEEEEc
Confidence 356678899999876543 44555555444555544 468888888775 5999999763
No 85
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=56.00 E-value=32 Score=32.62 Aligned_cols=42 Identities=21% Similarity=0.097 Sum_probs=30.3
Q ss_pred hHHHHHHHHcCCEEEEeccC------------CCH-HHHHHHHHhcCccEEEeCCh
Q 040734 286 PGAVTKIKESKLSLLTYGRL------------NNV-AEAVYMQHLMGIDGVIVDLV 328 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tv------------n~~-~~~~~~~~~~GVdgI~TD~p 328 (361)
+.+++++|++|+++.+|... +-. .+++.+ .++|||+|=.|+.
T Consensus 77 ~~l~~~i~~~Glk~Giw~~pg~~tc~~~pg~~~~~~~~~~~~-~~wGvdyvK~D~~ 131 (397)
T 3a5v_A 77 KPLVDDIHNLGLKAGIYSSAGTLTCGGHIASLGYEDIDAKTW-AKWGIDYLKYDNC 131 (397)
T ss_dssp HHHHHHHHHTTCEEEEEEESSSBCTTSCBCCTTCHHHHHHHH-HHHTCCEEEEECT
T ss_pred HHHHHHHHHcCCEEEEEecCCCCccCCCHHHHHHHHHHHHHH-HHcCCCEEEECCC
Confidence 47799999999999998321 122 234344 5799999999984
No 86
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=55.76 E-value=36 Score=32.19 Aligned_cols=91 Identities=12% Similarity=0.088 Sum_probs=57.7
Q ss_pred HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCC-----------c-cccCChHHHHHHH
Q 040734 226 PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEV-----------K-GVFRNPGAVTKIK 293 (361)
Q Consensus 226 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~-----------~-~~~~~~~~v~~~~ 293 (361)
.+.++.+++..|++|+..-.. .+.+ ..+.+.+.|+++|.+.. . .-......+..++
T Consensus 182 ~e~i~~ir~~~~~~pviv~~v-----------~~~~-~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~ 249 (404)
T 1eep_A 182 IELIKKIKTKYPNLDLIAGNI-----------VTKE-AALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVY 249 (404)
T ss_dssp HHHHHHHHHHCTTCEEEEEEE-----------CSHH-HHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCeEEEcCC-----------CcHH-HHHHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHH
Confidence 456677788877777764110 1233 34456678898887621 0 0001112334443
Q ss_pred H----cCCEEEEeccCCCHHHHHHHHHhcCccEEEeCChH
Q 040734 294 E----SKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQ 329 (361)
Q Consensus 294 ~----~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~ 329 (361)
+ .++.|++-|-+.+..++.+++ .+|+|+|+.-.+-
T Consensus 250 ~~~~~~~ipVia~GGI~~~~d~~~al-a~GAd~V~iG~~~ 288 (404)
T 1eep_A 250 EACNNTNICIIADGGIRFSGDVVKAI-AAGADSVMIGNLF 288 (404)
T ss_dssp HHHTTSSCEEEEESCCCSHHHHHHHH-HHTCSEEEECHHH
T ss_pred HHHhhcCceEEEECCCCCHHHHHHHH-HcCCCHHhhCHHH
Confidence 3 589999988899999999997 6999999986554
No 87
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=55.66 E-value=56 Score=28.26 Aligned_cols=78 Identities=15% Similarity=0.128 Sum_probs=53.0
Q ss_pred HHHHHHHHHhcCCcEEEcCCc-----cccCChHHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhcCccEEEeCC-----h
Q 040734 260 LEEAVKVCLEGGLQGIVSEVK-----GVFRNPGAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL-----V 328 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~-----~~~~~~~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~-----p 328 (361)
..+..+.+...|++.+++.-. ..-.+.++++.+++. +++|.+=|-+++++++++++ ..|+|+|+... |
T Consensus 37 ~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l-~~Gad~V~ig~~~l~dp 115 (247)
T 3tdn_A 37 LRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAF-LRGADKVSINTAAVENP 115 (247)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHH-HTTCSEECCSHHHHHCT
T ss_pred HHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHH-HcCCCeeehhhHHhhCh
Confidence 445555566778877764311 011234777777654 78888776899999998887 69999999654 5
Q ss_pred HHHHHHHHHh
Q 040734 329 QEITEAVYDM 338 (361)
Q Consensus 329 ~~~~~~l~~~ 338 (361)
..+.++.+.+
T Consensus 116 ~~~~~~~~~~ 125 (247)
T 3tdn_A 116 SLITQIAQTF 125 (247)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 6666666655
No 88
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=55.26 E-value=1e+02 Score=28.62 Aligned_cols=95 Identities=14% Similarity=0.201 Sum_probs=64.2
Q ss_pred cCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccc------cCChHHHHHHHH-c
Q 040734 223 TFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGV------FRNPGAVTKIKE-S 295 (361)
Q Consensus 223 Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~------~~~~~~v~~~~~-~ 295 (361)
+++++.++.+++.. +.|+..-.- .+.+ ....+.+.|+++|.+....- ..+-+.+..+.+ .
T Consensus 203 ~~~w~~i~~lr~~~-~~PvivK~v-----------~~~e-~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av 269 (352)
T 3sgz_A 203 SFCWNDLSLLQSIT-RLPIILKGI-----------LTKE-DAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAV 269 (352)
T ss_dssp TCCHHHHHHHHHHC-CSCEEEEEE-----------CSHH-HHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhc-CCCEEEEec-----------CcHH-HHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHh
Confidence 56789999999875 567654321 1223 34556789999987643211 111244444432 2
Q ss_pred --CCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHHH
Q 040734 296 --KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEI 331 (361)
Q Consensus 296 --Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~ 331 (361)
.+.|++-|-|.+..++.+++ .+|+|+|+.-+|-..
T Consensus 270 ~~~ipVia~GGI~~g~Dv~kaL-alGA~aV~iGr~~l~ 306 (352)
T 3sgz_A 270 KGKIEVYMDGGVRTGTDVLKAL-ALGARCIFLGRPILW 306 (352)
T ss_dssp TTSSEEEEESSCCSHHHHHHHH-HTTCSEEEESHHHHH
T ss_pred CCCCeEEEECCCCCHHHHHHHH-HcCCCEEEECHHHHH
Confidence 58999998899999999997 699999999887654
No 89
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=55.09 E-value=1.1e+02 Score=27.35 Aligned_cols=40 Identities=15% Similarity=0.367 Sum_probs=32.1
Q ss_pred HHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 287 GAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 287 ~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
+++..+++. ++.|++-|-+.+.+++.+++ ..|+|+|+.-.
T Consensus 231 ~~i~~i~~~~~ipvia~GGI~~~~d~~~~l-~~GAd~V~vg~ 271 (311)
T 1ep3_A 231 KLIHQVAQDVDIPIIGMGGVANAQDVLEMY-MAGASAVAVGT 271 (311)
T ss_dssp HHHHHHHTTCSSCEEECSSCCSHHHHHHHH-HHTCSEEEECT
T ss_pred HHHHHHHHhcCCCEEEECCcCCHHHHHHHH-HcCCCEEEECH
Confidence 566677655 68888877899999999987 58999998655
No 90
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=55.05 E-value=95 Score=28.98 Aligned_cols=77 Identities=13% Similarity=0.143 Sum_probs=52.6
Q ss_pred HHHHHHHHHhcCCcEEEcCCcccc-----------------------CChHHHHHHHHc---CCEEEEeccCCCHHHHHH
Q 040734 260 LEEAVKVCLEGGLQGIVSEVKGVF-----------------------RNPGAVTKIKES---KLSLLTYGRLNNVAEAVY 313 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~~~~-----------------------~~~~~v~~~~~~---Gl~v~~w~Tvn~~~~~~~ 313 (361)
+.+..+.+.+.|++++.+.-...- ..-++|..++++ .+.|++-|-|.+.+++.+
T Consensus 236 ~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~ 315 (367)
T 3zwt_A 236 KEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALE 315 (367)
T ss_dssp HHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHH
Confidence 445566677888888876533210 011567777765 589998888999999999
Q ss_pred HHHhcCccEEEeC------ChHHHHHHHHH
Q 040734 314 MQHLMGIDGVIVD------LVQEITEAVYD 337 (361)
Q Consensus 314 ~~~~~GVdgI~TD------~p~~~~~~l~~ 337 (361)
++ ..|+|+|+.- .|..+.++.+.
T Consensus 316 ~l-~~GAd~V~vgra~l~~gP~~~~~i~~~ 344 (367)
T 3zwt_A 316 KI-RAGASLVQLYTALTFWGPPVVGKVKRE 344 (367)
T ss_dssp HH-HHTCSEEEESHHHHHHCTHHHHHHHHH
T ss_pred HH-HcCCCEEEECHHHHhcCcHHHHHHHHH
Confidence 87 5999999954 35555555443
No 91
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=54.11 E-value=46 Score=30.27 Aligned_cols=103 Identities=18% Similarity=0.164 Sum_probs=63.3
Q ss_pred HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccc------cCChHHHHHHHHcCCEE
Q 040734 226 PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGV------FRNPGAVTKIKESKLSL 299 (361)
Q Consensus 226 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~------~~~~~~v~~~~~~Gl~v 299 (361)
.+.++.+++..+ +|+..-...+.. .....+..+.+.+.|+++++++.... ..+-+++..+++ ++.|
T Consensus 115 ~eiv~~v~~~~~-~pv~vKir~G~~------~~~~~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~-~ipV 186 (318)
T 1vhn_A 115 RYIVRELRKSVS-GKFSVKTRLGWE------KNEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK-RIPT 186 (318)
T ss_dssp HHHHHHHHHHCS-SEEEEEEESCSS------SCCHHHHHHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCC-SSCE
T ss_pred HHHHHHHHHhhC-CCEEEEecCCCC------hHHHHHHHHHHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHc-CCeE
Confidence 445555655543 555543332210 01112455666778888887653211 012256666666 8999
Q ss_pred EEeccCCCHHHHHHHHHhcCccEEEeCCh-----HHHHHHHH
Q 040734 300 LTYGRLNNVAEAVYMQHLMGIDGVIVDLV-----QEITEAVY 336 (361)
Q Consensus 300 ~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p-----~~~~~~l~ 336 (361)
++-|-+.+.+++.+++...|+|+|+.-++ ..+.++..
T Consensus 187 i~~GgI~s~~da~~~l~~~gad~V~iGR~~l~~P~l~~~~~~ 228 (318)
T 1vhn_A 187 FVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKD 228 (318)
T ss_dssp EEESSCCSHHHHHHHHHHHCCSEEEESGGGTTCTTHHHHHHH
T ss_pred EEECCcCCHHHHHHHHHcCCCCEEEECHHHHhCcchHHHHHH
Confidence 99888999999999874479999998775 44455544
No 92
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=53.51 E-value=73 Score=24.38 Aligned_cols=78 Identities=13% Similarity=0.052 Sum_probs=44.1
Q ss_pred HHHHHHHHHhcCCcEEEcCCccccC-ChHHHHHHHHcC--CEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHH
Q 040734 260 LEEAVKVCLEGGLQGIVSEVKGVFR-NPGAVTKIKESK--LSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEA 334 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~~~~~-~~~~v~~~~~~G--l~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~ 334 (361)
..++........++.+.++...--. .-++++.+++.+ .+|++.+.-.+.....+++ ..|++++++- .+..+.+.
T Consensus 50 ~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~-~~g~~~~l~Kp~~~~~l~~~ 128 (152)
T 3eul_A 50 GAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHDEPAIVYQAL-QQGAAGFLLKDSTRTEIVKA 128 (152)
T ss_dssp HHHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHH-HTTCSEEEETTCCHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEccCCHHHHHHHH-HcCCCEEEecCCCHHHHHHH
Confidence 3444444444555555555432111 136677777654 6777773334455555665 6999999974 45566655
Q ss_pred HHHh
Q 040734 335 VYDM 338 (361)
Q Consensus 335 l~~~ 338 (361)
++..
T Consensus 129 i~~~ 132 (152)
T 3eul_A 129 VLDC 132 (152)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 93
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=53.45 E-value=24 Score=30.67 Aligned_cols=69 Identities=14% Similarity=0.055 Sum_probs=44.9
Q ss_pred cCCHHHHHHHHHHC-CCCCEE-EEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEE
Q 040734 223 TFQPDAAVLIRKLQ-STYPVF-FLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLL 300 (361)
Q Consensus 223 Sf~~~~l~~l~~~~-p~~~~~-~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~ 300 (361)
+|.+..++.+|+.. |+.+.- .+.-..+ ...++.+.+.|++++.++.....-..+.++.++++|+++.
T Consensus 48 ~~G~~~v~~ir~~~~~~~~~dvhLmv~~p-----------~~~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~g 116 (228)
T 3ovp_A 48 TFGHPVVESLRKQLGQDPFFDMHMMVSKP-----------EQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVG 116 (228)
T ss_dssp CBCHHHHHHHHHHHCSSSCEEEEEECSCG-----------GGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEE
T ss_pred ccCHHHHHHHHHhhCCCCcEEEEEEeCCH-----------HHHHHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEE
Confidence 58999999999986 777654 2322111 1112344568899888876532112478999999999886
Q ss_pred Ee
Q 040734 301 TY 302 (361)
Q Consensus 301 ~w 302 (361)
+=
T Consensus 117 va 118 (228)
T 3ovp_A 117 LA 118 (228)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 94
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=53.22 E-value=35 Score=29.58 Aligned_cols=80 Identities=18% Similarity=0.086 Sum_probs=49.6
Q ss_pred cHHHHHHHHHhcCCcEEEcCCc------cccCChHHHHHHHHcC-CEEEEeccCCCHHHHHHHHHhcCccEEE-------
Q 040734 259 SLEEAVKVCLEGGLQGIVSEVK------GVFRNPGAVTKIKESK-LSLLTYGRLNNVAEAVYMQHLMGIDGVI------- 324 (361)
Q Consensus 259 ~l~~~~~~~~~~~~~~i~~~~~------~~~~~~~~v~~~~~~G-l~v~~w~Tvn~~~~~~~~~~~~GVdgI~------- 324 (361)
.+.+.++.+.+.|++.++++.- .+...+..++.+++.- +.+.+---+++++.+.+.+.+.|+|||+
T Consensus 18 ~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~~~~~~vhlmv~dp~~~i~~~~~aGadgv~vh~e~~~ 97 (230)
T 1tqj_A 18 RLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKKTLDVHLMIVEPEKYVEDFAKAGADIISVHVEHNA 97 (230)
T ss_dssp GHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGCCSEEEEEEESSSGGGTHHHHHHHTCSEEEEECSTTT
T ss_pred HHHHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhcCCcEEEEEEccCHHHHHHHHHHcCCCEEEECccccc
Confidence 4667777888888888776641 1112358889998753 4444321457765544444478999994
Q ss_pred eCChHHHHHHHHHh
Q 040734 325 VDLVQEITEAVYDM 338 (361)
Q Consensus 325 TD~p~~~~~~l~~~ 338 (361)
+|.+....+.+++.
T Consensus 98 ~~~~~~~~~~i~~~ 111 (230)
T 1tqj_A 98 SPHLHRTLCQIREL 111 (230)
T ss_dssp CTTHHHHHHHHHHT
T ss_pred chhHHHHHHHHHHc
Confidence 34556666665543
No 95
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=53.11 E-value=67 Score=25.21 Aligned_cols=68 Identities=21% Similarity=0.104 Sum_probs=35.2
Q ss_pred HHHHHHHHHhcCCcEEEcCCccc---cCChHHHHHHHHcCC---EEEEecc-CC---CHHHHHHHHHhcCccEEEeCC
Q 040734 260 LEEAVKVCLEGGLQGIVSEVKGV---FRNPGAVTKIKESKL---SLLTYGR-LN---NVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~v~~~~~~Gl---~v~~w~T-vn---~~~~~~~~~~~~GVdgI~TD~ 327 (361)
.++..+.+.+.+++.+.++...- ..-+++++.++++|. +|++=|. +. +..+....++.+|+|+++.+.
T Consensus 43 ~e~~v~~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~~~i~v~vGG~~~~~~~~~~~~~~~~~~~G~d~~~~~g 120 (137)
T 1ccw_A 43 QELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGGNIVVGKQHWPDVEKRFKDMGYDRVYAPG 120 (137)
T ss_dssp HHHHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEESCSSSSCCHHHHHHHHHHTTCSEECCTT
T ss_pred HHHHHHHHHhcCCCEEEEEecCcCcHHHHHHHHHHHHhcCCCCCEEEEECCCcCchHhhhhhHHHHHHCCCCEEECCC
Confidence 34444455555555444332210 113577888888874 4554432 22 122222333579999999763
No 96
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=52.40 E-value=36 Score=29.25 Aligned_cols=119 Identities=12% Similarity=0.094 Sum_probs=68.4
Q ss_pred ccCHHHHHHhCC-CCc-eEEEEEecCCccchhhhHHHHHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCCCE--
Q 040734 166 LCTLQEAFQQVD-PNV-GFNVELKFDDHIVYEQDYLIRVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPV-- 241 (361)
Q Consensus 166 iptL~EvL~~~~-~~~-~l~iEiK~~~~~~~~~~~~~~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~~~-- 241 (361)
+.+|.|.++.+. .+. .+.+++|+..- +. . .++.++.++.+++.. +.+.
T Consensus 18 ~~~l~~~i~~~~~~Gad~i~l~i~Dg~f-----------v~-------------~---~~~~~~~~~~lr~~~-~~~~~v 69 (228)
T 1h1y_A 18 FANLAAEADRMVRLGADWLHMDIMDGHF-----------VP-------------N---LTIGAPVIQSLRKHT-KAYLDC 69 (228)
T ss_dssp GGGHHHHHHHHHHTTCSEEEEEEEBSSS-----------SS-------------C---BCBCHHHHHHHHTTC-CSEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEecCCc-----------Cc-------------c---hhhCHHHHHHHHhhc-CCcEEE
Confidence 556666666653 333 56788886421 00 1 267788888888876 3333
Q ss_pred EEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCC-hHHHHHHHHcCCEEEEeccCCCHH-HHHHHHHhc-
Q 040734 242 FFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRN-PGAVTKIKESKLSLLTYGRLNNVA-EAVYMQHLM- 318 (361)
Q Consensus 242 ~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~-~~~v~~~~~~Gl~v~~w~Tvn~~~-~~~~~~~~~- 318 (361)
.+..+... +.++.+.+.|+++++++....... .+.++.+++.|+.+.+=...+++. .++.+. ..
T Consensus 70 ~lmv~d~~------------~~i~~~~~agad~v~vH~~~~~~~~~~~~~~i~~~g~~igv~~~p~t~~e~~~~~~-~~~ 136 (228)
T 1h1y_A 70 HLMVTNPS------------DYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLV-EAE 136 (228)
T ss_dssp EEESSCGG------------GGHHHHHHHTCSEEEEEGGGCTTTHHHHHHHHHHTTCEEEEEECTTSCGGGGHHHH-HSS
T ss_pred EEEecCHH------------HHHHHHHHcCCCEEEECCCCcccHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHH-hcC
Confidence 34443210 112344568899997665432224 567999999999887431123333 344443 34
Q ss_pred -CccEEEe
Q 040734 319 -GIDGVIV 325 (361)
Q Consensus 319 -GVdgI~T 325 (361)
++|.|..
T Consensus 137 ~~~d~vl~ 144 (228)
T 1h1y_A 137 NPVELVLV 144 (228)
T ss_dssp SCCSEEEE
T ss_pred CCCCEEEE
Confidence 8888864
No 97
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=51.62 E-value=94 Score=28.45 Aligned_cols=92 Identities=14% Similarity=0.089 Sum_probs=59.4
Q ss_pred HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcc--cc----------C--ChHHHHH
Q 040734 226 PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKG--VF----------R--NPGAVTK 291 (361)
Q Consensus 226 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~--~~----------~--~~~~v~~ 291 (361)
.+.++.+++..+..++.--. + .+. +..+.+.+.|+++|.+.... .. . +-..+..
T Consensus 137 ~~~i~~lr~~~~~~~vi~G~---------v--~s~-e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~ 204 (336)
T 1ypf_A 137 INMIQHIKKHLPESFVIAGN---------V--GTP-EAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRW 204 (336)
T ss_dssp HHHHHHHHHHCTTSEEEEEE---------E--CSH-HHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEECC---------c--CCH-HHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHH
Confidence 46677777777655544210 0 122 23455667888888763210 00 0 2344555
Q ss_pred HHHc-CCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHH
Q 040734 292 IKES-KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQE 330 (361)
Q Consensus 292 ~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~ 330 (361)
+.++ ++.|++-|-|.+..++.+++ .+|+|+|+.-.+-.
T Consensus 205 v~~~~~ipVIa~GGI~~g~Dv~kal-alGAdaV~iGr~~l 243 (336)
T 1ypf_A 205 CAKAASKPIIADGGIRTNGDVAKSI-RFGATMVMIGSLFA 243 (336)
T ss_dssp HHHTCSSCEEEESCCCSTHHHHHHH-HTTCSEEEESGGGT
T ss_pred HHHHcCCcEEEeCCCCCHHHHHHHH-HcCCCEEEeChhhh
Confidence 5444 89999988899999999997 69999999988876
No 98
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=51.52 E-value=61 Score=28.55 Aligned_cols=82 Identities=12% Similarity=0.136 Sum_probs=54.2
Q ss_pred ccHHHHHHHHHhcCCcEEEcCCc--c----ccCChHHHHHHHHcC--CEEEEeccCCCHHHHHHHHHhcCccEEEe----
Q 040734 258 NSLEEAVKVCLEGGLQGIVSEVK--G----VFRNPGAVTKIKESK--LSLLTYGRLNNVAEAVYMQHLMGIDGVIV---- 325 (361)
Q Consensus 258 ~~l~~~~~~~~~~~~~~i~~~~~--~----~~~~~~~v~~~~~~G--l~v~~w~Tvn~~~~~~~~~~~~GVdgI~T---- 325 (361)
..+.+.++...+.|++.++++.- . +..-+..++.+++.. +.+-+--.+++++.+.+.+.+.|+|+|+.
T Consensus 40 ~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~p~~~i~~~~~aGAd~itvH~Ea 119 (246)
T 3inp_A 40 ARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDALIESFAKAGATSIVFHPEA 119 (246)
T ss_dssp GGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSSCHHHHHHHHHHTCSEEEECGGG
T ss_pred hhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCCHHHHHHHHHHcCCCEEEEcccc
Confidence 35778888888889888876531 1 123578899998875 55555324677766555445799999884
Q ss_pred -CChHHHHHHHHHhc
Q 040734 326 -DLVQEITEAVYDMI 339 (361)
Q Consensus 326 -D~p~~~~~~l~~~~ 339 (361)
+.+.+..+..++.+
T Consensus 120 ~~~~~~~i~~ir~~G 134 (246)
T 3inp_A 120 SEHIDRSLQLIKSFG 134 (246)
T ss_dssp CSCHHHHHHHHHTTT
T ss_pred chhHHHHHHHHHHcC
Confidence 45556666666543
No 99
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=51.11 E-value=64 Score=27.26 Aligned_cols=114 Identities=15% Similarity=0.126 Sum_probs=65.7
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCCCEEEEccCCCccccccc-cccHHHHHHHHHhcCCcEEEcCCccc
Q 040734 204 QAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVR-RNSLEEAVKVCLEGGLQGIVSEVKGV 282 (361)
Q Consensus 204 ~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~-~~~l~~~~~~~~~~~~~~i~~~~~~~ 282 (361)
..+.+.+.+.|.. -+.+ -+++.++.+++.. +.|+.-....... ..++. .... +.++.+...|++.+++.....
T Consensus 26 ~~~a~~~~~~Ga~-~i~~--~~~~~i~~i~~~~-~~pv~~~~~~~~~-~~~~~i~~~~-~~i~~~~~~Gad~v~l~~~~~ 99 (223)
T 1y0e_A 26 SKMALAAYEGGAV-GIRA--NTKEDILAIKETV-DLPVIGIVKRDYD-HSDVFITATS-KEVDELIESQCEVIALDATLQ 99 (223)
T ss_dssp HHHHHHHHHHTCS-EEEE--ESHHHHHHHHHHC-CSCEEEECBCCCT-TCCCCBSCSH-HHHHHHHHHTCSEEEEECSCS
T ss_pred HHHHHHHHHCCCe-eecc--CCHHHHHHHHHhc-CCCEEeeeccCCC-ccccccCCcH-HHHHHHHhCCCCEEEEeeecc
Confidence 3444445555532 2222 4678888888875 6776322211000 00000 0122 234455678888887665432
Q ss_pred c----CChHHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEeC
Q 040734 283 F----RNPGAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD 326 (361)
Q Consensus 283 ~----~~~~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD 326 (361)
. ...++++.+++. |+.+.+ .+.+.++..++. ..|+|.|.+.
T Consensus 100 ~~p~~~~~~~i~~~~~~~~~~~v~~--~~~t~~e~~~~~-~~G~d~i~~~ 146 (223)
T 1y0e_A 100 QRPKETLDELVSYIRTHAPNVEIMA--DIATVEEAKNAA-RLGFDYIGTT 146 (223)
T ss_dssp CCSSSCHHHHHHHHHHHCTTSEEEE--ECSSHHHHHHHH-HTTCSEEECT
T ss_pred cCcccCHHHHHHHHHHhCCCceEEe--cCCCHHHHHHHH-HcCCCEEEeC
Confidence 1 014889999999 988765 367888887775 6999999864
No 100
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=51.10 E-value=36 Score=32.36 Aligned_cols=62 Identities=19% Similarity=0.226 Sum_probs=44.3
Q ss_pred HHHHHHHhcCCcEEEcCCccccC--ChHHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhcCccEEEe
Q 040734 262 EAVKVCLEGGLQGIVSEVKGVFR--NPGAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLMGIDGVIV 325 (361)
Q Consensus 262 ~~~~~~~~~~~~~i~~~~~~~~~--~~~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T 325 (361)
+.++.+.+.|++.+.++...-.. ..++++.+++. |+.|++= ++.+.++++.+. +.|+|+|..
T Consensus 147 e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~~i~Vi~g-~V~t~e~A~~a~-~aGAD~I~v 211 (400)
T 3ffs_A 147 ERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVG-NVVTEEATKELI-ENGADGIKV 211 (400)
T ss_dssp HHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEEEE-EECSHHHHHHHH-HTTCSEEEE
T ss_pred HHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcCCCeEEEe-ecCCHHHHHHHH-HcCCCEEEE
Confidence 34455667788888764332111 14778888886 8888875 688888888886 699999987
No 101
>2oo0_A ODC, ornithine decarboxylase; beta-alpha barrel, sheet, lyase; HET: PLP; 1.90A {Homo sapiens}
Probab=50.72 E-value=1.5e+02 Score=28.62 Aligned_cols=90 Identities=13% Similarity=0.168 Sum_probs=54.9
Q ss_pred HHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCE--EEEec-cC
Q 040734 229 AVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLS--LLTYG-RL 305 (361)
Q Consensus 229 l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~--v~~w~-Tv 305 (361)
++.+++..|+....+..... ......+...+.| .++.+ .+..-+..++++|+. .++|. ..
T Consensus 62 ~~~l~~~~~~~~i~yavKAn----------~~~~v~~~l~~~G-~g~dv------aS~~E~~~~~~aG~~~~~iv~~g~~ 124 (471)
T 2oo0_A 62 HLRWLKALPRVTPFYAVKCN----------DSKAIVKTLAATG-TGFDC------ASKTEIQLVQSLGVPPERIIYANPC 124 (471)
T ss_dssp HHHHHHHCTTEEEEEEGGGC----------CCHHHHHHHHHHT-CEEEE------CSHHHHHHHHHTTCCGGGEEECCSS
T ss_pred HHHHHHhCCCCeEEEEEeeC----------CCHHHHHHHHHcC-CcEEE------eCHHHHHHHHHcCCChhhEEEeCCC
Confidence 34566666665555555432 2234455555666 44432 255667777888873 45562 23
Q ss_pred CCHHHHHHHHHhcCccEEEeCChHHHHHHHH
Q 040734 306 NNVAEAVYMQHLMGIDGVIVDLVQEITEAVY 336 (361)
Q Consensus 306 n~~~~~~~~~~~~GVdgI~TD~p~~~~~~l~ 336 (361)
.+.++++.++ ..|+..++.|....+..+.+
T Consensus 125 k~~~ei~~a~-~~gv~~~~vds~~el~~l~~ 154 (471)
T 2oo0_A 125 KQVSQIKYAA-NNGVQMMTFDSEVELMKVAR 154 (471)
T ss_dssp CCHHHHHHHH-HTTCCEEEECSHHHHHHHHH
T ss_pred CCHHHHHHHH-HCCCCEEEECCHHHHHHHHH
Confidence 4677787775 58887788888888876654
No 102
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=50.58 E-value=84 Score=26.93 Aligned_cols=52 Identities=6% Similarity=0.071 Sum_probs=37.7
Q ss_pred HHHHHHHH-cCCEEEEeccCCCHHHHHHHHHhcCccEEEeC-----ChHHHHHHHHHhc
Q 040734 287 GAVTKIKE-SKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD-----LVQEITEAVYDMI 339 (361)
Q Consensus 287 ~~v~~~~~-~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD-----~p~~~~~~l~~~~ 339 (361)
..++.+++ .++++.+-+-+++++++..++ ..|+|+|+.. +|..+.++++.+.
T Consensus 65 ~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l-~~Gad~V~lg~~~l~~p~~~~~~~~~~g 122 (244)
T 1vzw_A 65 ALIAEVAQAMDIKVELSGGIRDDDTLAAAL-ATGCTRVNLGTAALETPEWVAKVIAEHG 122 (244)
T ss_dssp HHHHHHHHHCSSEEEEESSCCSHHHHHHHH-HTTCSEEEECHHHHHCHHHHHHHHHHHG
T ss_pred HHHHHHHHhcCCcEEEECCcCCHHHHHHHH-HcCCCEEEECchHhhCHHHHHHHHHHcC
Confidence 56777755 478888776788888888886 5899998864 4555666666643
No 103
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=50.43 E-value=9.4 Score=33.35 Aligned_cols=31 Identities=26% Similarity=0.174 Sum_probs=25.9
Q ss_pred ccccchHHHHHHHHhCCCCEEEEeeeeecCCcEE
Q 040734 69 AIKENSIASFNSSAKYPLDFIEFDVQVTKDGWPV 102 (361)
Q Consensus 69 ~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~V 102 (361)
...++.....+.+.+.|+|++++|+ +||.+|
T Consensus 14 ~D~~~l~~~i~~~~~~Gad~ihldi---~DG~fv 44 (230)
T 1tqj_A 14 ADFSRLGEEIKAVDEAGADWIHVDV---MDGRFV 44 (230)
T ss_dssp SCGGGHHHHHHHHHHTTCSEEEEEE---EBSSSS
T ss_pred cCHhHHHHHHHHHHHcCCCEEEEEE---EecCCC
Confidence 3477889999999999999999999 466554
No 104
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=50.39 E-value=95 Score=26.52 Aligned_cols=76 Identities=11% Similarity=-0.045 Sum_probs=49.5
Q ss_pred HHHHHHHhcCCcEEEcCCc-----cccCChHHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhcCccEEEeCC-----hHH
Q 040734 262 EAVKVCLEGGLQGIVSEVK-----GVFRNPGAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL-----VQE 330 (361)
Q Consensus 262 ~~~~~~~~~~~~~i~~~~~-----~~~~~~~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~-----p~~ 330 (361)
+..+.+.+.|++.+++... ..... ..++.+++. ++++.+-+-+++++++..++ ..|+|+|+... |..
T Consensus 35 ~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l-~~Gad~V~lg~~~l~~p~~ 112 (244)
T 2y88_A 35 DAALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKLDVQVELSGGIRDDESLAAAL-ATGCARVNVGTAALENPQW 112 (244)
T ss_dssp HHHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHH-HTTCSEEEECHHHHHCHHH
T ss_pred HHHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhcCCcEEEECCCCCHHHHHHHH-HcCCCEEEECchHhhChHH
Confidence 3334445566766665321 01112 677777654 78888876789999988886 69999998654 556
Q ss_pred HHHHHHHhc
Q 040734 331 ITEAVYDMI 339 (361)
Q Consensus 331 ~~~~l~~~~ 339 (361)
+.++++.+.
T Consensus 113 ~~~~~~~~g 121 (244)
T 2y88_A 113 CARVIGEHG 121 (244)
T ss_dssp HHHHHHHHG
T ss_pred HHHHHHHcC
Confidence 677766654
No 105
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=50.16 E-value=66 Score=28.40 Aligned_cols=72 Identities=18% Similarity=0.198 Sum_probs=44.5
Q ss_pred HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEe
Q 040734 226 PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTY 302 (361)
Q Consensus 226 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w 302 (361)
.+.++.+|+..|+.|+.++.... .+....++...+.+...|++++.+.--..--...+++.++++|+.+...
T Consensus 82 ~~~v~~ir~~~~~~Pi~~m~y~n-----~v~~~g~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~l 153 (262)
T 2ekc_A 82 LELSETLRKEFPDIPFLLMTYYN-----PIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPL 153 (262)
T ss_dssp HHHHHHHHHHCTTSCEEEECCHH-----HHHHHCHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCE
T ss_pred HHHHHHHHhhcCCCCEEEEecCc-----HHHHhhHHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEEE
Confidence 35677888887788988753211 0111234566677888999988765211111246788889999886443
No 106
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=50.02 E-value=33 Score=30.68 Aligned_cols=127 Identities=15% Similarity=0.100 Sum_probs=73.2
Q ss_pred cccCHHHHHHhCC------CCceEEEEEecCCccchhhhHHHHHHHHHHHHHHHhcCCCCEE-EEcCCHHHHHHHHHHCC
Q 040734 165 SLCTLQEAFQQVD------PNVGFNVELKFDDHIVYEQDYLIRVIQAILKIVFEFAENRPII-FSTFQPDAAVLIRKLQS 237 (361)
Q Consensus 165 ~iptL~EvL~~~~------~~~~l~iEiK~~~~~~~~~~~~~~~v~~vl~~l~~~~~~~rv~-~~Sf~~~~l~~l~~~~p 237 (361)
..-|.+|+....+ ..-++-+|+=..... -..+....+++.-.++ +.|+ .++ +++-|+..++.+.+.-+
T Consensus 72 G~~taeeAv~~a~lare~~gt~~iKlEvi~d~~~--l~pD~~~tv~aa~~L~-k~Gf--~Vlpy~~~D~~~ak~l~~~G~ 146 (268)
T 2htm_A 72 GARTAEEAVRLARLGRLLTGERWVKLEVIPDPTY--LLPDPLETLKAAERLI-EEDF--LVLPYMGPDLVLAKRLAALGT 146 (268)
T ss_dssp TCCSHHHHHHHHHHHHHHHCCSEEBCCCCSCTTT--TCCCHHHHHHHHHHHH-HTTC--EECCEECSCHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHhhhHhcCcceeeeeeccCccc--cCcCHHHHHHHHHHHH-HCCC--EEeeccCCCHHHHHHHHhcCC
Confidence 3556666665443 223555666654321 1112223444433333 3333 233 45678888888887765
Q ss_pred CCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHH-c-C-CEEEEeccCCCHHHHHHH
Q 040734 238 TYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKE-S-K-LSLLTYGRLNNVAEAVYM 314 (361)
Q Consensus 238 ~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~-~-G-l~v~~w~Tvn~~~~~~~~ 314 (361)
.+-. -+.. -.|- + .. +.++.+++.+++ . + +.|++=+-|.+++++..+
T Consensus 147 ~aVm-Plg~----------------------pIGs-G----~G--i~~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~A 196 (268)
T 2htm_A 147 ATVM-PLAA----------------------PIGS-G----WG--VRTRALLELFAREKASLPPVVVDAGLGLPSHAAEV 196 (268)
T ss_dssp SCBE-EBSS----------------------STTT-C----CC--STTHHHHHHHHHTTTTSSCBEEESCCCSHHHHHHH
T ss_pred CEEE-ecCc----------------------cCcC-C----cc--cCCHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHH
Confidence 5431 1100 0111 0 01 236888999988 3 4 788888889999999998
Q ss_pred HHhcCccEEEeCC
Q 040734 315 QHLMGIDGVIVDL 327 (361)
Q Consensus 315 ~~~~GVdgI~TD~ 327 (361)
+ ++|+|||+.+.
T Consensus 197 m-eLGAdgVlVgS 208 (268)
T 2htm_A 197 M-ELGLDAVLVNT 208 (268)
T ss_dssp H-HTTCCEEEESH
T ss_pred H-HcCCCEEEECh
Confidence 7 69999999776
No 107
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=50.00 E-value=1.1e+02 Score=27.27 Aligned_cols=72 Identities=13% Similarity=0.126 Sum_probs=47.0
Q ss_pred HHhcCCcEEEcCCcc---ccCChHHHHHHHHc---CCEEEEeccCCCHHHHHHHHHhcCccEEEe-------CChHHHHH
Q 040734 267 CLEGGLQGIVSEVKG---VFRNPGAVTKIKES---KLSLLTYGRLNNVAEAVYMQHLMGIDGVIV-------DLVQEITE 333 (361)
Q Consensus 267 ~~~~~~~~i~~~~~~---~~~~~~~v~~~~~~---Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T-------D~p~~~~~ 333 (361)
+...|++.+.++... +-.+.+.+..+.+. ++.+++=+-+++++++.++. ..|+|||+. ++|....+
T Consensus 178 A~~~Gad~IGv~~r~l~~~~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~-~~GadgvlVGsal~~a~dp~~~~~ 256 (272)
T 3qja_A 178 ALKAGAKVIGVNARDLMTLDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYA-GAGADAVLVGEGLVTSGDPRAAVA 256 (272)
T ss_dssp HHHHTCSEEEEESBCTTTCCBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHH-HTTCSEEEECHHHHTCSCHHHHHH
T ss_pred HHHCCCCEEEECCCcccccccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHH-HcCCCEEEEcHHHhCCCCHHHHHH
Confidence 445566665554321 11233455555443 67888776899999999886 699999997 66777666
Q ss_pred HHHHhc
Q 040734 334 AVYDMI 339 (361)
Q Consensus 334 ~l~~~~ 339 (361)
.+.+..
T Consensus 257 ~l~~~~ 262 (272)
T 3qja_A 257 DLVTAG 262 (272)
T ss_dssp HHHTTT
T ss_pred HHHhhh
Confidence 655443
No 108
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=49.68 E-value=91 Score=30.88 Aligned_cols=89 Identities=11% Similarity=0.101 Sum_probs=59.6
Q ss_pred HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcc--ccCC--------------hHHH
Q 040734 226 PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKG--VFRN--------------PGAV 289 (361)
Q Consensus 226 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~--~~~~--------------~~~v 289 (361)
.+.++++++.+|++++..-.-. +.+.+ ......|++++-+-..- ...| -+..
T Consensus 310 ~~~i~~ik~~~p~~~viaGNVa-----------T~e~a-~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a 377 (556)
T 4af0_A 310 IEFIKWIKQTYPKIDVIAGNVV-----------TREQA-AQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVA 377 (556)
T ss_dssp HHHHHHHHHHCTTSEEEEEEEC-----------SHHHH-HHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHH
T ss_pred HHHHHHHHhhCCcceEEecccc-----------CHHHH-HHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHH
Confidence 5677888889998887543221 22333 33346778776433211 0001 1455
Q ss_pred HHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 290 TKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 290 ~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
+.+++.|++|++-|-+....++.+.+ .+|.|.||--.
T Consensus 378 ~~a~~~~vpvIADGGI~~sGDi~KAl-aaGAd~VMlGs 414 (556)
T 4af0_A 378 EFASRFGIPCIADGGIGNIGHIAKAL-ALGASAVMMGG 414 (556)
T ss_dssp HHHGGGTCCEEEESCCCSHHHHHHHH-HTTCSEEEEST
T ss_pred HHHHHcCCCEEecCCcCcchHHHHHh-hcCCCEEEEch
Confidence 66788999999999999999999997 69999999654
No 109
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=49.04 E-value=57 Score=29.38 Aligned_cols=49 Identities=10% Similarity=0.106 Sum_probs=36.8
Q ss_pred HHHHHHHHc---CCEEEEeccCCCHHHHHHHHHhcCccEEEeC------ChHHHHHHHH
Q 040734 287 GAVTKIKES---KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD------LVQEITEAVY 336 (361)
Q Consensus 287 ~~v~~~~~~---Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD------~p~~~~~~l~ 336 (361)
+++..++++ .+.|++=|-|.+.+++.+++ ..|+|+|+.- .|..+.++.+
T Consensus 230 ~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l-~~GAd~V~vg~~~l~~~p~~~~~i~~ 287 (311)
T 1jub_A 230 ANVRAFYTRLKPEIQIIGTGGIETGQDAFEHL-LCGATMLQIGTALHKEGPAIFDRIIK 287 (311)
T ss_dssp HHHHHHHTTSCTTSEEEEESSCCSHHHHHHHH-HHTCSEEEECHHHHHHCTHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCEEEECCCCCHHHHHHHH-HcCCCEEEEchHHHhcCcHHHHHHHH
Confidence 566777665 68998888899999999987 5899999864 4555544443
No 110
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=48.94 E-value=87 Score=26.00 Aligned_cols=76 Identities=12% Similarity=0.032 Sum_probs=47.2
Q ss_pred HHHHHHhcCCcEEEcCCccccCChHHHHHHHHc---CCEEEEeccCCCHHHHHHHHHhcCccEEEeC-ChHHHHHHHHHh
Q 040734 263 AVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKES---KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD-LVQEITEAVYDM 338 (361)
Q Consensus 263 ~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~---Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD-~p~~~~~~l~~~ 338 (361)
..+.+...|+..+.++.... -..+.++.+++. ++.+.+- ++.++++...+. ..|+|.|+.. ++..+.++.++.
T Consensus 27 ~~~~~~~~G~~~iev~~~~~-~~~~~i~~ir~~~~~~~~ig~~-~v~~~~~~~~a~-~~Gad~iv~~~~~~~~~~~~~~~ 103 (205)
T 1wa3_A 27 KALAVFEGGVHLIEITFTVP-DADTVIKELSFLKEKGAIIGAG-TVTSVEQCRKAV-ESGAEFIVSPHLDEEISQFCKEK 103 (205)
T ss_dssp HHHHHHHTTCCEEEEETTST-THHHHHHHTHHHHHTTCEEEEE-SCCSHHHHHHHH-HHTCSEEECSSCCHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEeCCCh-hHHHHHHHHHHHCCCCcEEEec-ccCCHHHHHHHH-HcCCCEEEcCCCCHHHHHHHHHc
Confidence 34445567788776654421 113457777765 4777776 788888887776 6999999753 344455555444
Q ss_pred cCC
Q 040734 339 IKP 341 (361)
Q Consensus 339 ~~~ 341 (361)
..|
T Consensus 104 g~~ 106 (205)
T 1wa3_A 104 GVF 106 (205)
T ss_dssp TCE
T ss_pred CCc
Confidence 433
No 111
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=48.90 E-value=1.6e+02 Score=27.14 Aligned_cols=102 Identities=13% Similarity=0.047 Sum_probs=58.5
Q ss_pred HHHHHHHHHHCC-CCCEEEEccCCCccccccccccHHHHHHHH---HhcCCcEEEcCCccc---------cCChHHHHHH
Q 040734 226 PDAAVLIRKLQS-TYPVFFLTNGGTEIFYDVRRNSLEEAVKVC---LEGGLQGIVSEVKGV---------FRNPGAVTKI 292 (361)
Q Consensus 226 ~~~l~~l~~~~p-~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~---~~~~~~~i~~~~~~~---------~~~~~~v~~~ 292 (361)
.++++.+|+..+ ++|+++=..... +.+. ..+.++..+++ .+. ++.+++..... -..-.++..+
T Consensus 197 ~eiv~aVr~avg~d~pv~vRls~~~--~~~~-g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~i 272 (343)
T 3kru_A 197 IEVIDEVRKNWPENKPIFVRVSADD--YMEG-GINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETI 272 (343)
T ss_dssp HHHHHHHHHTSCTTSCEEEEEECCC--SSTT-SCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHH
T ss_pred HHHHHHHHhcCCccCCeEEEeechh--hhcc-CccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHH
Confidence 456666666654 567665433211 0000 01234444443 344 67776632110 0123566666
Q ss_pred HHc-CCEEEEeccCCCHHHHHHHHHhcC-ccEEEeCChHHHH
Q 040734 293 KES-KLSLLTYGRLNNVAEAVYMQHLMG-IDGVIVDLVQEIT 332 (361)
Q Consensus 293 ~~~-Gl~v~~w~Tvn~~~~~~~~~~~~G-VdgI~TD~p~~~~ 332 (361)
++. ++.|++-|-+++++++++++ ..| +|+|.--++-...
T Consensus 273 r~~~~iPVi~~Ggi~t~e~Ae~~l-~~G~aD~V~iGR~~lan 313 (343)
T 3kru_A 273 KKRCNIKTSAVGLITTQELAEEIL-SNERADLVALGRELLRN 313 (343)
T ss_dssp HHHHTCEEEEESSCCCHHHHHHHH-HTTSCSEEEESHHHHHC
T ss_pred HHhcCcccceeeeeeHHHHHHHHH-hchhhHHHHHHHHHhcC
Confidence 654 78998887889999999987 466 9999987765543
No 112
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=48.64 E-value=91 Score=24.03 Aligned_cols=107 Identities=16% Similarity=0.101 Sum_probs=58.9
Q ss_pred CCEEEEcCCHHHHHHHHHHCCC--CCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccC-ChHHHHHHH
Q 040734 217 RPIIFSTFQPDAAVLIRKLQST--YPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFR-NPGAVTKIK 293 (361)
Q Consensus 217 ~rv~~~Sf~~~~l~~l~~~~p~--~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~-~~~~v~~~~ 293 (361)
.+|++..-+......+++.... +.+... .+..+++.......++.+.++....-. .-++++.++
T Consensus 8 ~~ILivdd~~~~~~~l~~~L~~~g~~v~~~-------------~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr 74 (154)
T 3gt7_A 8 GEILIVEDSPTQAEHLKHILEETGYQTEHV-------------RNGREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLK 74 (154)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTTTCEEEEE-------------SSHHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHH
T ss_pred CcEEEEeCCHHHHHHHHHHHHHCCCEEEEe-------------CCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHH
Confidence 3566666666655555544322 221111 124455555555566666666543211 136777887
Q ss_pred Hc----CCEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHHHHH
Q 040734 294 ES----KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEAVYD 337 (361)
Q Consensus 294 ~~----Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~~ 337 (361)
+. .+++++.+.-.+.....+++ ..|++++++= .+..+...++.
T Consensus 75 ~~~~~~~~pii~~s~~~~~~~~~~~~-~~g~~~~l~KP~~~~~l~~~i~~ 123 (154)
T 3gt7_A 75 GQPDLRTIPVILLTILSDPRDVVRSL-ECGADDFITKPCKDVVLASHVKR 123 (154)
T ss_dssp HSTTTTTSCEEEEECCCSHHHHHHHH-HHCCSEEEESSCCHHHHHHHHHH
T ss_pred hCCCcCCCCEEEEECCCChHHHHHHH-HCCCCEEEeCCCCHHHHHHHHHH
Confidence 74 56787772334555556665 6999999873 45555555543
No 113
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=48.38 E-value=1.5e+02 Score=26.60 Aligned_cols=121 Identities=16% Similarity=0.164 Sum_probs=68.8
Q ss_pred CceEEEEEecCCccchhhhHHHHHHHHHHHHHHHhcCCCCEEEEcC---CHHHHHHHHHHCCCCCEEEEccCCCcccccc
Q 040734 179 NVGFNVELKFDDHIVYEQDYLIRVIQAILKIVFEFAENRPIIFSTF---QPDAAVLIRKLQSTYPVFFLTNGGTEIFYDV 255 (361)
Q Consensus 179 ~~~l~iEiK~~~~~~~~~~~~~~~v~~vl~~l~~~~~~~rv~~~Sf---~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~ 255 (361)
++.+.-|+=++.. ++.+ .++ .+-+.+.|| |.+.++++.+. +.|+.+-..... ..
T Consensus 91 Glp~~Tev~d~~~-----------v~~l----~~~--vd~lqIgA~~~~n~~LLr~va~~--gkPVilK~G~~~-t~--- 147 (285)
T 3sz8_A 91 GVPVITDVHEAEQ-----------AAPV----AEI--ADVLQVPAFLARQTDLVVAIAKA--GKPVNVKKPQFM-SP--- 147 (285)
T ss_dssp CCCEEEECCSGGG-----------HHHH----HTT--CSEEEECGGGTTCHHHHHHHHHT--SSCEEEECCTTS-CG---
T ss_pred CCeEEEEeCCHHH-----------HHHH----HHh--CCEEEECccccCCHHHHHHHHcc--CCcEEEeCCCCC-CH---
Confidence 6777777765432 2222 223 345678885 57777777654 678877654321 11
Q ss_pred ccccHHHHHHHHHhcCCcEEEc-------CCccccCChHHHHHHHHc--CCEEEEeccCCCH-----------------H
Q 040734 256 RRNSLEEAVKVCLEGGLQGIVS-------EVKGVFRNPGAVTKIKES--KLSLLTYGRLNNV-----------------A 309 (361)
Q Consensus 256 ~~~~l~~~~~~~~~~~~~~i~~-------~~~~~~~~~~~v~~~~~~--Gl~v~~w~Tvn~~-----------------~ 309 (361)
..+..+++++...|..-+.+ .+..+.++-..+..+++. |+.|+.+ .-... .
T Consensus 148 --~ei~~ave~i~~~Gn~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~~~~pV~~D-~sHs~q~p~~~~~~s~G~r~~v~ 224 (285)
T 3sz8_A 148 --TQLKHVVSKCGEVGNDRVMLCERGSSFGYDNLVVDMLGFRQMAETTGGCPVIFD-VTHSLQCRDPLGDASGGRRRQVL 224 (285)
T ss_dssp --GGTHHHHHHHHHTTCCCEEEEECCEECSSSCEECCTTHHHHHHHHTTSCCEEEE-TTTTCC---------------HH
T ss_pred --HHHHHHHHHHHHcCCCcEEEEeCCCCCCCCcCccCHHHHHHHHHhCCCCCEEEe-CCCccccCCCcCCCCCCchhhHH
Confidence 12456677776665432221 222222456778888887 8999887 33331 2
Q ss_pred HHHHHHHhcCccEEEe
Q 040734 310 EAVYMQHLMGIDGVIV 325 (361)
Q Consensus 310 ~~~~~~~~~GVdgI~T 325 (361)
.+......+|+||++-
T Consensus 225 ~~a~AAvA~GA~gl~I 240 (285)
T 3sz8_A 225 DLARAGIAVGIAGLFL 240 (285)
T ss_dssp HHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHhCCCEEEE
Confidence 2333334689998764
No 114
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=48.35 E-value=55 Score=25.74 Aligned_cols=52 Identities=6% Similarity=0.063 Sum_probs=29.5
Q ss_pred HHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEe---CChHHHHHHHHHhc
Q 040734 287 GAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIV---DLVQEITEAVYDMI 339 (361)
Q Consensus 287 ~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T---D~p~~~~~~l~~~~ 339 (361)
++++.++++|+++++- |-+....+...+..+|++.++. ..|..+..++++..
T Consensus 43 ~~l~~l~~~g~~~~i~-T~~~~~~~~~~l~~~gl~~~~~~~kp~~~~~~~~~~~~~ 97 (162)
T 2p9j_A 43 IGIKLLQKMGITLAVI-SGRDSAPLITRLKELGVEEIYTGSYKKLEIYEKIKEKYS 97 (162)
T ss_dssp HHHHHHHTTTCEEEEE-ESCCCHHHHHHHHHTTCCEEEECC--CHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCEEEEE-eCCCcHHHHHHHHHcCCHhhccCCCCCHHHHHHHHHHcC
Confidence 5677777777777776 5554444555444567666553 23444445555443
No 115
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=48.19 E-value=36 Score=28.95 Aligned_cols=57 Identities=14% Similarity=0.146 Sum_probs=40.0
Q ss_pred HHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 265 KVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 265 ~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
+.+...|++++++..... ..+.++.++. |+.+.+ ++++.+++.++. ..|+|.|..+.
T Consensus 82 ~~a~~~gad~v~l~~~~~--~~~~~~~~~~-~~~ig~--sv~t~~~~~~a~-~~gaD~i~~~~ 138 (221)
T 1yad_A 82 DIALFSTIHRVQLPSGSF--SPKQIRARFP-HLHIGR--SVHSLEEAVQAE-KEDADYVLFGH 138 (221)
T ss_dssp HHHHTTTCCEEEECTTSC--CHHHHHHHCT-TCEEEE--EECSHHHHHHHH-HTTCSEEEEEC
T ss_pred HHHHHcCCCEEEeCCCcc--CHHHHHHHCC-CCEEEE--EcCCHHHHHHHH-hCCCCEEEECC
Confidence 456678899998875532 4556666554 776644 578888887775 69999998754
No 116
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=48.01 E-value=81 Score=30.73 Aligned_cols=91 Identities=12% Similarity=0.146 Sum_probs=60.2
Q ss_pred HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCc--cc-----c--C------ChHHHH
Q 040734 226 PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVK--GV-----F--R------NPGAVT 290 (361)
Q Consensus 226 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~--~~-----~--~------~~~~v~ 290 (361)
.+.++.+++..|++|+..-.- .+.+. .+.+.+.|++++.+... .. . + .-..+.
T Consensus 284 ~~~i~~i~~~~~~~pvi~~~v-----------~t~~~-a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~ 351 (514)
T 1jcn_A 284 IAMVHYIKQKYPHLQVIGGNV-----------VTAAQ-AKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVA 351 (514)
T ss_dssp HHHHHHHHHHCTTCEEEEEEE-----------CSHHH-HHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCceEeccc-----------chHHH-HHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHH
Confidence 477899999988888864211 12333 34556788988865221 00 0 0 113344
Q ss_pred HHHH-cCCEEEEeccCCCHHHHHHHHHhcCccEEEeCChH
Q 040734 291 KIKE-SKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQ 329 (361)
Q Consensus 291 ~~~~-~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~ 329 (361)
.+.+ .+++|++-|-+.+..++.+++ .+|+|+|+--.+-
T Consensus 352 ~~~~~~~ipVia~GGI~~~~di~kal-a~GAd~V~iG~~~ 390 (514)
T 1jcn_A 352 EYARRFGVPIIADGGIQTVGHVVKAL-ALGASTVMMGSLL 390 (514)
T ss_dssp HHHGGGTCCEEEESCCCSHHHHHHHH-HTTCSEEEESTTT
T ss_pred HHHhhCCCCEEEECCCCCHHHHHHHH-HcCCCeeeECHHH
Confidence 4433 489999988899999999997 6999999987754
No 117
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=47.99 E-value=42 Score=26.52 Aligned_cols=52 Identities=6% Similarity=-0.012 Sum_probs=36.4
Q ss_pred HHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEe---CChHHHHHHHHHhc
Q 040734 287 GAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIV---DLVQEITEAVYDMI 339 (361)
Q Consensus 287 ~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T---D~p~~~~~~l~~~~ 339 (361)
..++.++++|+++.+- |-+....+...+..+|++.++. +.|..+..++++..
T Consensus 38 ~~l~~l~~~g~~~~i~-T~~~~~~~~~~~~~~gl~~~~~~~kpk~~~~~~~~~~~~ 92 (164)
T 3e8m_A 38 AGIFWAHNKGIPVGIL-TGEKTEIVRRRAEKLKVDYLFQGVVDKLSAAEELCNELG 92 (164)
T ss_dssp HHHHHHHHTTCCEEEE-CSSCCHHHHHHHHHTTCSEEECSCSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCEEEEE-eCCChHHHHHHHHHcCCCEeecccCChHHHHHHHHHHcC
Confidence 3588888888888888 6555566666655688887776 45666666666654
No 118
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=47.95 E-value=65 Score=27.05 Aligned_cols=56 Identities=14% Similarity=0.085 Sum_probs=42.9
Q ss_pred HHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEe
Q 040734 263 AVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIV 325 (361)
Q Consensus 263 ~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T 325 (361)
.++.+...|++++++.. ...++++.+++.|..+.+- +.++.++.+.. ..|+|.|..
T Consensus 72 ~i~~a~~~Gad~V~~~~----~~~~~~~~~~~~g~~~~~g--~~t~~e~~~a~-~~G~d~v~v 127 (212)
T 2v82_A 72 QVDALARMGCQLIVTPN----IHSEVIRRAVGYGMTVCPG--CATATEAFTAL-EAGAQALKI 127 (212)
T ss_dssp HHHHHHHTTCCEEECSS----CCHHHHHHHHHTTCEEECE--ECSHHHHHHHH-HTTCSEEEE
T ss_pred HHHHHHHcCCCEEEeCC----CCHHHHHHHHHcCCCEEee--cCCHHHHHHHH-HCCCCEEEE
Confidence 34667788999998543 2678899999999887543 67888887775 699999986
No 119
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=47.50 E-value=1.2e+02 Score=25.10 Aligned_cols=105 Identities=15% Similarity=0.002 Sum_probs=65.1
Q ss_pred HHHHHHHHHHhcCCCCEEE--EcCC-HHHHHHHHHHCC-CCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcC
Q 040734 203 IQAILKIVFEFAENRPIIF--STFQ-PDAAVLIRKLQS-TYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSE 278 (361)
Q Consensus 203 v~~vl~~l~~~~~~~rv~~--~Sf~-~~~l~~l~~~~p-~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~ 278 (361)
...+++.+.+.+.. -+-+ .+-+ .+.++.+|+..| +..++.-+- .+.++ ...+...|++++ +.
T Consensus 24 ~~~~~~~~~~~G~~-~iev~~~~~~~~~~i~~ir~~~~~~~~ig~~~v-----------~~~~~-~~~a~~~Gad~i-v~ 89 (205)
T 1wa3_A 24 AKEKALAVFEGGVH-LIEITFTVPDADTVIKELSFLKEKGAIIGAGTV-----------TSVEQ-CRKAVESGAEFI-VS 89 (205)
T ss_dssp HHHHHHHHHHTTCC-EEEEETTSTTHHHHHHHTHHHHHTTCEEEEESC-----------CSHHH-HHHHHHHTCSEE-EC
T ss_pred HHHHHHHHHHCCCC-EEEEeCCChhHHHHHHHHHHHCCCCcEEEeccc-----------CCHHH-HHHHHHcCCCEE-Ec
Confidence 44556666665532 1222 1212 345788888765 455443121 12333 344556889888 33
Q ss_pred CccccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 279 VKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 279 ~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
.. ..+++++.+++.|+.+++= +.++.++.+.+ .+|+|.|-...
T Consensus 90 ~~---~~~~~~~~~~~~g~~vi~g--~~t~~e~~~a~-~~Gad~vk~~~ 132 (205)
T 1wa3_A 90 PH---LDEEISQFCKEKGVFYMPG--VMTPTELVKAM-KLGHTILKLFP 132 (205)
T ss_dssp SS---CCHHHHHHHHHHTCEEECE--ECSHHHHHHHH-HTTCCEEEETT
T ss_pred CC---CCHHHHHHHHHcCCcEECC--cCCHHHHHHHH-HcCCCEEEEcC
Confidence 32 2688999999999999873 56788888886 69999988764
No 120
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=47.50 E-value=1.2e+02 Score=28.30 Aligned_cols=95 Identities=12% Similarity=0.250 Sum_probs=63.8
Q ss_pred cCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcc---c---cCChHHHHHHHHc-
Q 040734 223 TFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKG---V---FRNPGAVTKIKES- 295 (361)
Q Consensus 223 Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~---~---~~~~~~v~~~~~~- 295 (361)
.++.+.++.+++.. +.|+..-.- .+. +....+.+.|+++|.+.... + ..+-+.+..+++.
T Consensus 211 ~~~~~~i~~l~~~~-~~pv~vK~~-----------~~~-e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~ 277 (370)
T 1gox_A 211 SLSWKDVAWLQTIT-SLPILVKGV-----------ITA-EDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAA 277 (370)
T ss_dssp TCCHHHHHHHHHHC-CSCEEEECC-----------CSH-HHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHh-CCCEEEEec-----------CCH-HHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHh
Confidence 36778889998875 677754111 122 33456678899988774311 0 1123455556553
Q ss_pred --CCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHHH
Q 040734 296 --KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEI 331 (361)
Q Consensus 296 --Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~ 331 (361)
.+.|++=|-|.+..++.+++ .+|+|+|+.-++-..
T Consensus 278 ~~~ipvia~GGI~~~~D~~k~l-~~GAdaV~iGr~~l~ 314 (370)
T 1gox_A 278 QGRIPVFLDGGVRRGTDVFKAL-ALGAAGVFIGRPVVF 314 (370)
T ss_dssp TTSSCEEEESSCCSHHHHHHHH-HHTCSEEEECHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHH-HcCCCEEeecHHHHH
Confidence 58898888899999999997 599999999886543
No 121
>3o27_A Putative uncharacterized protein; swapped-hairpin fold, transcription factor, DNA binding PROT; 2.80A {Sulfolobus islandicus}
Probab=47.44 E-value=18 Score=25.05 Aligned_cols=46 Identities=15% Similarity=0.093 Sum_probs=29.9
Q ss_pred EEEecCCCCCCCCcchhhhcccccchHHHHHHHHhC-CCCEEEEeeeeecCCcEEEE
Q 040734 49 VVGHRGHGMNVLQSSDKRMQAIKENSIASFNSSAKY-PLDFIEFDVQVTKDGWPVIF 104 (361)
Q Consensus 49 iiaHRG~~~~~~~~~~~~~~~~pENTl~Af~~A~~~-Gad~vE~DV~lTkDg~~Vv~ 104 (361)
.-+|+|+.++. .|-=|=-..+.+|+.. -.|.+|+-|. ++||++|++
T Consensus 13 p~~~kgg~g~e---------tyYInIPaeI~kaLgIk~gD~fel~ve-~kdgeIvLc 59 (68)
T 3o27_A 13 PRAYKGGSGHT---------TFYLLIPKDIAEALDIKPDDTFILNME-QKDGDIVLS 59 (68)
T ss_dssp CEEC-----CC---------CEEEEECHHHHHHTTCCTTCCEEEEEE-EETTEEEEE
T ss_pred eeeeeCCCCce---------EEEEeCcHHHHHHhCCCCCCEEEEEEe-cCCCeEEEE
Confidence 35789887531 4555666888888765 3578888888 899988775
No 122
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=47.26 E-value=90 Score=23.58 Aligned_cols=49 Identities=10% Similarity=0.178 Sum_probs=30.2
Q ss_pred HHHHHHHH----cCCEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHHHH
Q 040734 287 GAVTKIKE----SKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEAVY 336 (361)
Q Consensus 287 ~~v~~~~~----~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~ 336 (361)
++++.+++ .+..|++.+...+.....+++ ..|++++++- .+..+...++
T Consensus 69 ~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~-~~g~~~~l~kp~~~~~L~~~i~ 123 (147)
T 2zay_A 69 DLFNSLKKNPQTASIPVIALSGRATAKEEAQLL-DMGFIDFIAKPVNAIRLSARIK 123 (147)
T ss_dssp HHHHHHHTSTTTTTSCEEEEESSCCHHHHHHHH-HHTCSEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHcCcccCCCCEEEEeCCCCHHHHHHHH-hCCCCEEEeCCCCHHHHHHHHH
Confidence 56777765 357777773334555555665 6899999874 3445544443
No 123
>2nva_A Arginine decarboxylase, A207R protein; PLP, TIM barrel, eukaryotic ODC- like, lyase; HET: PL2; 1.80A {Paramecium bursaria chlorella virus 1} PDB: 2nv9_A*
Probab=47.26 E-value=1.3e+02 Score=27.67 Aligned_cols=90 Identities=9% Similarity=0.105 Sum_probs=56.4
Q ss_pred HHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCC---EEEEeccC
Q 040734 229 AVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKL---SLLTYGRL 305 (361)
Q Consensus 229 l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl---~v~~w~Tv 305 (361)
++.+++..|+....+..... ......+...+.|+ ++.+. +..-+..+++.|+ .+...+..
T Consensus 31 ~~~l~~~~~~~~~~~~vKan----------~~~~v~~~l~~~G~-g~~va------s~~E~~~~~~~G~~~~~I~~~~~~ 93 (372)
T 2nva_A 31 IDQWTILFPRVTPHYAVKCN----------NDEVLLKTMCDKNV-NFDCA------SSSEIKKVIQIGVSPSRIIFAHTM 93 (372)
T ss_dssp HHHHHHHCTTEEEEEEGGGC----------CCHHHHHHHHHTTC-EEEEC------SHHHHHHHHHHTCCGGGEEECCSC
T ss_pred HHHHHHhCCCCeEEEEeeeC----------CCHHHHHHHHHcCC-cEEEc------CHHHHHHHHHcCCCHHHEEECCCC
Confidence 34566666665555555432 22344556666776 65432 5566777788886 35444344
Q ss_pred CCHHHHHHHHHhcCccEEEeCChHHHHHHHH
Q 040734 306 NNVAEAVYMQHLMGIDGVIVDLVQEITEAVY 336 (361)
Q Consensus 306 n~~~~~~~~~~~~GVdgI~TD~p~~~~~~l~ 336 (361)
.++++++.++ ..|+..++.|..+.+..+.+
T Consensus 94 k~~~~l~~a~-~~~v~~~~vds~~~l~~l~~ 123 (372)
T 2nva_A 94 KTIDDLIFAK-DQGVDIATFDSSFELDKIHT 123 (372)
T ss_dssp CCHHHHHHHH-HHTCCEEEECSHHHHHHHHH
T ss_pred CCHHHHHHHH-HCCCCEEEeCCHHHHHHHHH
Confidence 5677887776 58887678888888876654
No 124
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=46.67 E-value=63 Score=28.75 Aligned_cols=143 Identities=9% Similarity=0.021 Sum_probs=86.0
Q ss_pred CCcccCHHHHHHhCC--CCceEEEEEecCCccchh-hhHHHHHHHHHHHHHHHhcCCCCEEEE------cCCHHHHHHHH
Q 040734 163 DDSLCTLQEAFQQVD--PNVGFNVELKFDDHIVYE-QDYLIRVIQAILKIVFEFAENRPIIFS------TFQPDAAVLIR 233 (361)
Q Consensus 163 ~~~iptL~EvL~~~~--~~~~l~iEiK~~~~~~~~-~~~~~~~v~~vl~~l~~~~~~~rv~~~------Sf~~~~l~~l~ 233 (361)
..++.+|.+.+.... +...++-|+|..+|..-. ..+. ..+.+. .+.|. .-+-+- .-+.+.|+.++
T Consensus 27 ~~p~~~~~~~l~~~~~~~~~~iIAEiKraSPSkg~i~~dp----~~iA~~-~~~GA-~aiSVLTd~~~F~Gs~~~L~~vr 100 (258)
T 4a29_A 27 QRPIISLNERILEFNKRNITAIIAVYERKSPSGLDVERDP----IEYAKF-MERYA-VGLSITTEEKYFNGSYETLRKIA 100 (258)
T ss_dssp SSCCCCHHHHHHHHHHTTCCCEEEEECSBCTTSCBCCCCH----HHHHHH-HTTTC-SEEEEECCSTTTCCCHHHHHHHH
T ss_pred cCCccCHHHHHHHHhhCCCcEEEEEEecCCCCCCCccCCH----HHHHHH-HhCCC-eEEEEeCCCCCCCCCHHHHHHHH
Confidence 345678888887654 467899999986654100 0011 112222 22231 111121 12567888887
Q ss_pred HHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccC--ChHHHHHHHHcCCEEEEeccCCCHHHH
Q 040734 234 KLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFR--NPGAVTKIKESKLSLLTYGRLNNVAEA 311 (361)
Q Consensus 234 ~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~--~~~~v~~~~~~Gl~v~~w~Tvn~~~~~ 311 (361)
+.. ++|+..- |+-...+ -+..++.+|++.+-+-...+-. -.++++.+++.|+.+.+= |++.+++
T Consensus 101 ~~v-~lPvLrK---------DFiid~y--QI~eAr~~GADaILLI~a~L~~~~l~~l~~~A~~lGl~~LvE--Vh~~~El 166 (258)
T 4a29_A 101 SSV-SIPILMS---------DFIVKES--QIDDAYNLGADTVLLIVKILTERELESLLEYARSYGMEPLIL--INDENDL 166 (258)
T ss_dssp TTC-SSCEEEE---------SCCCSHH--HHHHHHHHTCSEEEEEGGGSCHHHHHHHHHHHHHTTCCCEEE--ESSHHHH
T ss_pred Hhc-CCCEeec---------cccccHH--HHHHHHHcCCCeeehHHhhcCHHHHHHHHHHHHHHhHHHHHh--cchHHHH
Confidence 764 6776432 1111112 2445678899887655544311 147889999999999887 7899999
Q ss_pred HHHHHhcCccEEEeC
Q 040734 312 VYMQHLMGIDGVIVD 326 (361)
Q Consensus 312 ~~~~~~~GVdgI~TD 326 (361)
++.+ .+|.+-|=.|
T Consensus 167 ~rAl-~~~a~iIGIN 180 (258)
T 4a29_A 167 DIAL-RIGARFIGIM 180 (258)
T ss_dssp HHHH-HTTCSEEEEC
T ss_pred HHHh-cCCCcEEEEe
Confidence 9987 6998877554
No 125
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=46.40 E-value=92 Score=23.46 Aligned_cols=75 Identities=9% Similarity=0.093 Sum_probs=42.9
Q ss_pred HHHHHHHHhcCCcEEEcCCccccC-ChHHHHHHHH----cCCEEEEeccCCCHHHHHHHHHhcCccEEEeC---ChHHHH
Q 040734 261 EEAVKVCLEGGLQGIVSEVKGVFR-NPGAVTKIKE----SKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD---LVQEIT 332 (361)
Q Consensus 261 ~~~~~~~~~~~~~~i~~~~~~~~~-~~~~v~~~~~----~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD---~p~~~~ 332 (361)
.++.+......++.+.++....-. .-++++.+++ .+.++.+.+.-.+.....+++ ..|+++++.- .+..+.
T Consensus 41 ~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~-~~ga~~~l~Kp~~~~~~l~ 119 (144)
T 3kht_A 41 AKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNVSDDRAKQCM-AAGASSVVDKSSNNVTDFY 119 (144)
T ss_dssp HHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHH-HTTCSEEEECCTTSHHHHH
T ss_pred HHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCCCHHHHHHHH-HcCCCEEEECCCCcHHHHH
Confidence 344444444445555555432111 2367777776 357788883334555566665 6999999963 455555
Q ss_pred HHHH
Q 040734 333 EAVY 336 (361)
Q Consensus 333 ~~l~ 336 (361)
+.++
T Consensus 120 ~~i~ 123 (144)
T 3kht_A 120 GRIY 123 (144)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 126
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=46.22 E-value=62 Score=29.16 Aligned_cols=49 Identities=16% Similarity=0.044 Sum_probs=37.1
Q ss_pred HHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEeC------ChHHHHHHHH
Q 040734 287 GAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD------LVQEITEAVY 336 (361)
Q Consensus 287 ~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD------~p~~~~~~l~ 336 (361)
+++..+++. ++.|++=|-|.+.+++.+++ ..|+|+|+.- .|..+.++.+
T Consensus 233 ~~i~~v~~~~~~ipvi~~GGI~~~~da~~~l-~~GAd~V~ig~~~l~~~p~~~~~i~~ 289 (314)
T 2e6f_A 233 ANVNAFYRRCPDKLVFGCGGVYSGEDAFLHI-LAGASMVQVGTALQEEGPGIFTRLED 289 (314)
T ss_dssp HHHHHHHHHCTTSEEEEESSCCSHHHHHHHH-HHTCSSEEECHHHHHHCTTHHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEECCCCCHHHHHHHH-HcCCCEEEEchhhHhcCcHHHHHHHH
Confidence 667777665 79999888899999999987 5899999864 4554554443
No 127
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=46.14 E-value=62 Score=33.32 Aligned_cols=46 Identities=17% Similarity=0.125 Sum_probs=31.4
Q ss_pred cccHHHHHHHHHhcCCcEEEcCCccc-------------------cC--ChHHHHHHHHcCCEEEEe
Q 040734 257 RNSLEEAVKVCLEGGLQGIVSEVKGV-------------------FR--NPGAVTKIKESKLSLLTY 302 (361)
Q Consensus 257 ~~~l~~~~~~~~~~~~~~i~~~~~~~-------------------~~--~~~~v~~~~~~Gl~v~~w 302 (361)
...+.+.++.+++.|+..++++-.+. +. -..+++++|++|+++.+|
T Consensus 349 ee~v~~~ad~~~~~G~~~~viDDGW~~~r~~~~~~~Gd~~~d~~kFP~Glk~lv~~ih~~Glk~GlW 415 (732)
T 2xn2_A 349 EDKLKTIVDKAKKLGLEMFVLDDGWFGHRDDDNSSLGDWKVYKKKFPNGLGHFADYVHEQGLKFGLW 415 (732)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECSSSBTTCSSTTSCTTCCSBCTTTCTTCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCcEEEEcCcccccCCCCccccCceeeCchhcCccHHHHHHHHHHcCCEEEEE
Confidence 33455566666777887777662221 11 147899999999999999
No 128
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=45.86 E-value=87 Score=23.04 Aligned_cols=79 Identities=11% Similarity=0.169 Sum_probs=44.0
Q ss_pred HHHHHHHHhcCCcEEEcCCcccc-CChHHHHHHHHcC--CEEEEeccCCCHHHHHHHHHhcCccEEEeC---ChHHHHHH
Q 040734 261 EEAVKVCLEGGLQGIVSEVKGVF-RNPGAVTKIKESK--LSLLTYGRLNNVAEAVYMQHLMGIDGVIVD---LVQEITEA 334 (361)
Q Consensus 261 ~~~~~~~~~~~~~~i~~~~~~~~-~~~~~v~~~~~~G--l~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD---~p~~~~~~ 334 (361)
.++........++.+.++....- -.-++++.+++.+ .++.+.+.-.+.....+++ ..|++++++- .++.+.+.
T Consensus 41 ~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~~~~~~~~~~-~~g~~~~l~KP~~~~~~l~~~ 119 (130)
T 3eod_A 41 VDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKAL-RLGVEDVLLKPVKDLNRLREM 119 (130)
T ss_dssp HHHHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCCHHHHHHHH-HHCCSEEEESCC---CHHHHH
T ss_pred HHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCCHHHHHHHH-HcCCCEEEeCCCCcHHHHHHH
Confidence 34444444444555555543210 1236777777764 6777773334455555665 5999999863 45677777
Q ss_pred HHHhcC
Q 040734 335 VYDMIK 340 (361)
Q Consensus 335 l~~~~~ 340 (361)
++....
T Consensus 120 i~~~l~ 125 (130)
T 3eod_A 120 VFACLY 125 (130)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 766544
No 129
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=45.80 E-value=1.1e+02 Score=28.87 Aligned_cols=95 Identities=16% Similarity=0.217 Sum_probs=62.2
Q ss_pred CCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcc---c---cCChHHHHHHHHc--
Q 040734 224 FQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKG---V---FRNPGAVTKIKES-- 295 (361)
Q Consensus 224 f~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~---~---~~~~~~v~~~~~~-- 295 (361)
+.++.++++++.. +.|+..-.. .+.+ ....+.+.|+++|.+.... . ..+-+.+..+++.
T Consensus 239 ~~~~~i~~lr~~~-~~PvivKgv-----------~~~e-~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~ 305 (392)
T 2nzl_A 239 ISWEDIKWLRRLT-SLPIVAKGI-----------LRGD-DAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVE 305 (392)
T ss_dssp CCHHHHHHHC--C-CSCEEEEEE-----------CCHH-HHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhh-CCCEEEEec-----------CCHH-HHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcC
Confidence 5677888888765 467654211 1222 3455668899998874321 1 1122445555443
Q ss_pred -CCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHHHH
Q 040734 296 -KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEIT 332 (361)
Q Consensus 296 -Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~ 332 (361)
.+.|++-|-|.+..++.+++ .+|+|+|+.-+|-...
T Consensus 306 ~~ipVia~GGI~~g~Dv~kal-alGAd~V~iGr~~l~~ 342 (392)
T 2nzl_A 306 GKVEVFLDGGVRKGTDVLKAL-ALGAKAVFVGRPIVWG 342 (392)
T ss_dssp TSSEEEECSSCCSHHHHHHHH-HTTCSEEEECHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHH-HhCCCeeEECHHHHHH
Confidence 58999988899999999998 6999999999876553
No 130
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=45.77 E-value=56 Score=29.64 Aligned_cols=71 Identities=8% Similarity=-0.106 Sum_probs=45.5
Q ss_pred HHHHhcCCcEEEcCCcccc--------CChHHHHHHHHcCCEEEEeccCC------CHHHHH---HHHHhcCccEEEeCC
Q 040734 265 KVCLEGGLQGIVSEVKGVF--------RNPGAVTKIKESKLSLLTYGRLN------NVAEAV---YMQHLMGIDGVIVDL 327 (361)
Q Consensus 265 ~~~~~~~~~~i~~~~~~~~--------~~~~~v~~~~~~Gl~v~~w~Tvn------~~~~~~---~~~~~~GVdgI~TD~ 327 (361)
+.+.+.|++++.+....-- .-.++++.+++.|+.+++| +.. +++.+. ++..++|+|.|-|.+
T Consensus 132 e~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIie-~~~G~~~~~d~e~i~~aariA~elGAD~VKt~~ 210 (295)
T 3glc_A 132 DDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAV-TGVGKDMVRDQRYFSLATRIAAEMGAQIIKTYY 210 (295)
T ss_dssp HHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEEE-ECC----CCSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEEE-CCCCCccCCCHHHHHHHHHHHHHhCCCEEEeCC
Confidence 3455788887765533210 0126778889999999999 543 443222 333469999999999
Q ss_pred h-HHHHHHHH
Q 040734 328 V-QEITEAVY 336 (361)
Q Consensus 328 p-~~~~~~l~ 336 (361)
+ +.+.++++
T Consensus 211 t~e~~~~vv~ 220 (295)
T 3glc_A 211 VEKGFERIVA 220 (295)
T ss_dssp CTTTHHHHHH
T ss_pred CHHHHHHHHH
Confidence 8 45555544
No 131
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=45.41 E-value=1.3e+02 Score=29.53 Aligned_cols=95 Identities=16% Similarity=0.143 Sum_probs=62.8
Q ss_pred cCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcc---ccC---ChHHHHHHHH--
Q 040734 223 TFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKG---VFR---NPGAVTKIKE-- 294 (361)
Q Consensus 223 Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~---~~~---~~~~v~~~~~-- 294 (361)
++.++.++++++.. +.|+..-... .. +....+.+.|+++|.+.... +.. +-+.+..+++
T Consensus 329 ~~~~~~i~~lr~~~-~~PvivKgv~-----------~~-e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v 395 (511)
T 1kbi_A 329 SLTWKDIEELKKKT-KLPIVIKGVQ-----------RT-EDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPIL 395 (511)
T ss_dssp TCCHHHHHHHHHHC-SSCEEEEEEC-----------SH-HHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHh-CCcEEEEeCC-----------CH-HHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHH
Confidence 35688899999876 6777643111 12 23456678999998874221 100 1123333322
Q ss_pred ------cCCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHHH
Q 040734 295 ------SKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEI 331 (361)
Q Consensus 295 ------~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~ 331 (361)
.++.|++-|-|.+..++.+++ .+|+|+|+.-+|-..
T Consensus 396 ~~~~~~~~ipVia~GGI~~g~Dv~kaL-alGAdaV~iGr~~l~ 437 (511)
T 1kbi_A 396 EQRNLKDKLEVFVDGGVRRGTDVLKAL-CLGAKGVGLGRPFLY 437 (511)
T ss_dssp HTTTCBTTBEEEEESSCCSHHHHHHHH-HHTCSEEEECHHHHH
T ss_pred HhhccCCCcEEEEECCCCCHHHHHHHH-HcCCCEEEECHHHHH
Confidence 268899988899999999998 699999999887655
No 132
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=45.34 E-value=1.5e+02 Score=27.07 Aligned_cols=45 Identities=9% Similarity=0.108 Sum_probs=35.5
Q ss_pred hHHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHHH
Q 040734 286 PGAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEI 331 (361)
Q Consensus 286 ~~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~ 331 (361)
.+.+..+++. ++.|++=|-|.+.+++.+++ .+|+|+|+.-.+-..
T Consensus 239 ~~~l~~v~~~~~~ipvia~GGI~~~~d~~k~l-~~GAd~V~iG~~~l~ 285 (349)
T 1p0k_A 239 AASLAEIRSEFPASTMIASGGLQDALDVAKAI-ALGASCTGMAGHFLK 285 (349)
T ss_dssp HHHHHHHHHHCTTSEEEEESSCCSHHHHHHHH-HTTCSEEEECHHHHH
T ss_pred HHHHHHHHHhcCCCeEEEECCCCCHHHHHHHH-HcCCCEEEEcHHHHH
Confidence 4556666553 79999888899999999987 599999998876544
No 133
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=45.30 E-value=1e+02 Score=23.60 Aligned_cols=124 Identities=8% Similarity=0.020 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCc
Q 040734 201 RVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVK 280 (361)
Q Consensus 201 ~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~ 280 (361)
.+...+.+.+.+.+. ++++...+++.++.++.. .+... ..... + .+.+..+...+++.+.....
T Consensus 16 ~iG~~la~~L~~~g~--~V~~id~~~~~~~~~~~~--~~~~~--~gd~~----~------~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 16 AAGVGLVRELTAAGK--KVLAVDKSKEKIELLEDE--GFDAV--IADPT----D------ESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp HHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHHT--TCEEE--ECCTT----C------HHHHHHSCCTTCSEEEECCS
T ss_pred HHHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHC--CCcEE--ECCCC----C------HHHHHhCCcccCCEEEEecC
Confidence 355666777766653 688888899888888763 33222 11111 0 11111111123455544333
Q ss_pred cccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHHHHHHHHHhcCCc
Q 040734 281 GVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEITEAVYDMIKPA 342 (361)
Q Consensus 281 ~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~~l~~~~~~~ 342 (361)
....+......+++.| ...++..++++.....+. .+|+|.|+.-.-.....+.+....|.
T Consensus 80 ~~~~n~~~~~~a~~~~-~~~iia~~~~~~~~~~l~-~~G~~~vi~p~~~~~~~l~~~i~~p~ 139 (141)
T 3llv_A 80 DDEFNLKILKALRSVS-DVYAIVRVSSPKKKEEFE-EAGANLVVLVADAVKQAFMDKIKKME 139 (141)
T ss_dssp CHHHHHHHHHHHHHHC-CCCEEEEESCGGGHHHHH-HTTCSEEEEHHHHHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHhC-CceEEEEEcChhHHHHHH-HcCCCEEECHHHHHHHHHHHHHhCcc
Confidence 2112345667778887 333332467776666664 79999998766555555555554443
No 134
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=45.27 E-value=94 Score=23.25 Aligned_cols=78 Identities=6% Similarity=0.108 Sum_probs=46.2
Q ss_pred HHHHHHHHh-cCCcEEEcCCccc-c-CChHHHHHHHH----cCCEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHH
Q 040734 261 EEAVKVCLE-GGLQGIVSEVKGV-F-RNPGAVTKIKE----SKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEI 331 (361)
Q Consensus 261 ~~~~~~~~~-~~~~~i~~~~~~~-~-~~~~~v~~~~~----~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~ 331 (361)
.+++..... ..++.+.++...- - -.-++++.+++ .+.++.+.+.-.+.....+++ ..|++++++- .+..+
T Consensus 39 ~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~-~~g~~~~l~KP~~~~~l 117 (140)
T 3lua_A 39 KKFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIRNNSRTANTPVIIATKSDNPGYRHAAL-KFKVSDYILKPYPTKRL 117 (140)
T ss_dssp HHHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHHHSGGGTTCCEEEEESCCCHHHHHHHH-HSCCSEEEESSCCTTHH
T ss_pred HHHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHHhCcccCCCCEEEEeCCCCHHHHHHHH-HcCCCEEEECCCCHHHH
Confidence 444444444 5556666555421 0 01366777776 457888883334555566665 6999999973 56667
Q ss_pred HHHHHHhc
Q 040734 332 TEAVYDMI 339 (361)
Q Consensus 332 ~~~l~~~~ 339 (361)
.+.++...
T Consensus 118 ~~~i~~~~ 125 (140)
T 3lua_A 118 ENSVRSVL 125 (140)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666543
No 135
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=45.19 E-value=92 Score=26.89 Aligned_cols=82 Identities=9% Similarity=0.018 Sum_probs=51.1
Q ss_pred ccHHHHHHHHHhcCCcEEEcCCc------cccCChHHHHHHHHc---CCEEEEeccCCCHHHHHHHHHhcCccEEEe---
Q 040734 258 NSLEEAVKVCLEGGLQGIVSEVK------GVFRNPGAVTKIKES---KLSLLTYGRLNNVAEAVYMQHLMGIDGVIV--- 325 (361)
Q Consensus 258 ~~l~~~~~~~~~~~~~~i~~~~~------~~~~~~~~v~~~~~~---Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T--- 325 (361)
..+.+.++.+.+.|++.++++.- .+...+..++.+++. .+.+-+---++++..+.+.+.+.|+|+|+.
T Consensus 17 ~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~i~~~~~aGad~itvH~E 96 (228)
T 3ovp_A 17 ANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLE 96 (228)
T ss_dssp GGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGGGGHHHHHHHTCSEEEEEGG
T ss_pred hhHHHHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCCHHHHHHHHHHcCCCEEEEccC
Confidence 35777888888888888877421 122367889999877 344433213566665544434689999884
Q ss_pred --CChHHHHHHHHHhc
Q 040734 326 --DLVQEITEAVYDMI 339 (361)
Q Consensus 326 --D~p~~~~~~l~~~~ 339 (361)
+.+....+..++.+
T Consensus 97 a~~~~~~~i~~i~~~G 112 (228)
T 3ovp_A 97 ATENPGALIKDIRENG 112 (228)
T ss_dssp GCSCHHHHHHHHHHTT
T ss_pred CchhHHHHHHHHHHcC
Confidence 44555666665543
No 136
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=45.13 E-value=47 Score=28.18 Aligned_cols=51 Identities=10% Similarity=0.054 Sum_probs=35.1
Q ss_pred HHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEe---CChHHHHHHHHHhc
Q 040734 288 AVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIV---DLVQEITEAVYDMI 339 (361)
Q Consensus 288 ~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T---D~p~~~~~~l~~~~ 339 (361)
+++.++++|+++.+- |-+........+..+|++.++. +.|..+..+++++.
T Consensus 84 ~L~~L~~~G~~l~I~-T~~~~~~~~~~l~~lgi~~~f~~~k~K~~~l~~~~~~lg 137 (211)
T 3ij5_A 84 GIRCLITSDIDVAII-TGRRAKLLEDRANTLGITHLYQGQSDKLVAYHELLATLQ 137 (211)
T ss_dssp HHHHHHHTTCEEEEE-CSSCCHHHHHHHHHHTCCEEECSCSSHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCEEEEE-eCCCHHHHHHHHHHcCCchhhcccCChHHHHHHHHHHcC
Confidence 678888888888888 7666666666665678877764 44555666666544
No 137
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=45.08 E-value=29 Score=30.99 Aligned_cols=36 Identities=14% Similarity=0.230 Sum_probs=28.9
Q ss_pred HHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEe
Q 040734 288 AVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIV 325 (361)
Q Consensus 288 ~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T 325 (361)
..+.+.+.|+.|+.| +++++...+++. ++|++.|+-
T Consensus 127 aa~~L~~~Gf~Vlpy-~~dd~~~akrl~-~~G~~aVmP 162 (265)
T 1wv2_A 127 AAEQLVKDGFDVMVY-TSDDPIIARQLA-EIGCIAVMP 162 (265)
T ss_dssp HHHHHHTTTCEEEEE-ECSCHHHHHHHH-HSCCSEEEE
T ss_pred HHHHHHHCCCEEEEE-eCCCHHHHHHHH-HhCCCEEEe
Confidence 344445559999999 899998888885 799999976
No 138
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=44.68 E-value=1.5e+02 Score=27.59 Aligned_cols=90 Identities=14% Similarity=0.162 Sum_probs=56.3
Q ss_pred HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcc--cc--------CCh--HHHHHHH
Q 040734 226 PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKG--VF--------RNP--GAVTKIK 293 (361)
Q Consensus 226 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~--~~--------~~~--~~v~~~~ 293 (361)
.+.++.+++..|+.++..-.- .+.++ ...+.+.|+++|.+.... .. -.+ ..|..+.
T Consensus 129 ~e~I~~ir~~~~~~~Vi~G~V-----------~T~e~-A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g~p~l~aI~~~~ 196 (361)
T 3r2g_A 129 GKTLKSLRQLLGSRCIMAGNV-----------ATYAG-ADYLASCGADIIKAGIGGGSVCSTRIKTGFGVPMLTCIQDCS 196 (361)
T ss_dssp HHHHHHHHHHHTTCEEEEEEE-----------CSHHH-HHHHHHTTCSEEEECCSSSSCHHHHHHHCCCCCHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCeEEEcCc-----------CCHHH-HHHHHHcCCCEEEEcCCCCcCccccccCCccHHHHHHHHHHH
Confidence 357888888878877765110 12333 344557888888753221 00 012 3333333
Q ss_pred HcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCCh
Q 040734 294 ESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLV 328 (361)
Q Consensus 294 ~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p 328 (361)
+.-..|++-|-+.+..++.+++ .+|+|+|+.-.+
T Consensus 197 ~~~~PVIAdGGI~~~~di~kAL-a~GAd~V~iGr~ 230 (361)
T 3r2g_A 197 RADRSIVADGGIKTSGDIVKAL-AFGADFVMIGGM 230 (361)
T ss_dssp TSSSEEEEESCCCSHHHHHHHH-HTTCSEEEESGG
T ss_pred HhCCCEEEECCCCCHHHHHHHH-HcCCCEEEEChH
Confidence 3323888877899999999997 699999997765
No 139
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=43.87 E-value=65 Score=26.54 Aligned_cols=51 Identities=6% Similarity=-0.080 Sum_probs=35.0
Q ss_pred HHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeC---ChHHHHHHHHHhcC
Q 040734 289 VTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD---LVQEITEAVYDMIK 340 (361)
Q Consensus 289 v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD---~p~~~~~~l~~~~~ 340 (361)
++.++++|+++.+- |-+........+..+|++.++.. .|..+..+++.+..
T Consensus 55 l~~L~~~g~~~~iv-Tn~~~~~~~~~l~~lgl~~~~~~~kpk~~~~~~~~~~~~~ 108 (191)
T 3n1u_A 55 LKLLMAAGIQVAII-TTAQNAVVDHRMEQLGITHYYKGQVDKRSAYQHLKKTLGL 108 (191)
T ss_dssp HHHHHHTTCEEEEE-CSCCSHHHHHHHHHHTCCEEECSCSSCHHHHHHHHHHHTC
T ss_pred HHHHHHCCCeEEEE-eCcChHHHHHHHHHcCCccceeCCCChHHHHHHHHHHhCC
Confidence 78888888888888 65665556555556788777654 46666667666543
No 140
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=43.86 E-value=87 Score=26.75 Aligned_cols=77 Identities=10% Similarity=0.118 Sum_probs=46.4
Q ss_pred cHHHHHHHHHhcCCcEEEcCCc------cccCChHHHHHHHHc-CC--EEEEeccCCCHHHH-HHHHHhcCccEEE----
Q 040734 259 SLEEAVKVCLEGGLQGIVSEVK------GVFRNPGAVTKIKES-KL--SLLTYGRLNNVAEA-VYMQHLMGIDGVI---- 324 (361)
Q Consensus 259 ~l~~~~~~~~~~~~~~i~~~~~------~~~~~~~~v~~~~~~-Gl--~v~~w~Tvn~~~~~-~~~~~~~GVdgI~---- 324 (361)
.+.+.++.+.+.|++.+++..- .....++.++.+++. .. .|+.. +|++.++ ..+. +.|+|+|+
T Consensus 20 ~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~~~~~~v~lm--v~d~~~~i~~~~-~agad~v~vH~~ 96 (228)
T 1h1y_A 20 NLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLM--VTNPSDYVEPLA-KAGASGFTFHIE 96 (228)
T ss_dssp GHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEE--SSCGGGGHHHHH-HHTCSEEEEEGG
T ss_pred HHHHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhcCCcEEEEEE--ecCHHHHHHHHH-HcCCCEEEECCC
Confidence 4667777777888888766621 112246888888875 22 33445 4665443 4444 68999994
Q ss_pred -eCCh-HHHHHHHHHh
Q 040734 325 -VDLV-QEITEAVYDM 338 (361)
Q Consensus 325 -TD~p-~~~~~~l~~~ 338 (361)
++.+ ....+.+++.
T Consensus 97 ~~~~~~~~~~~~i~~~ 112 (228)
T 1h1y_A 97 VSRDNWQELIQSIKAK 112 (228)
T ss_dssp GCTTTHHHHHHHHHHT
T ss_pred CcccHHHHHHHHHHHc
Confidence 4555 5555555443
No 141
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=43.82 E-value=1.5e+02 Score=25.27 Aligned_cols=76 Identities=22% Similarity=0.283 Sum_probs=55.4
Q ss_pred HHHHHHHHHhcCCcEEEcCCccc--cCChHHHHHHHHc---CCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHHHHHH
Q 040734 260 LEEAVKVCLEGGLQGIVSEVKGV--FRNPGAVTKIKES---KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEITEA 334 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~~~--~~~~~~v~~~~~~---Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~~ 334 (361)
+.++.+.+.+.|++++..+.... -.+.+.+..+++. .++|.+-|-+.+.+++.+++ ..|+|.|=+-....+.+-
T Consensus 134 ~~~~a~~a~eaGad~I~tstg~~~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l-~aGA~~iG~s~~~~i~~~ 212 (225)
T 1mzh_A 134 IKKAVEICIEAGADFIKTSTGFAPRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMI-EAGADRIGTSSGISIAEE 212 (225)
T ss_dssp HHHHHHHHHHHTCSEEECCCSCSSSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHH-HTTCSEEEESCHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEECCCCCCCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHH-HhCchHHHHccHHHHHHH
Confidence 45566777888999997665321 1255778888765 58999988899999999998 599998777776655544
Q ss_pred HH
Q 040734 335 VY 336 (361)
Q Consensus 335 l~ 336 (361)
++
T Consensus 213 ~~ 214 (225)
T 1mzh_A 213 FL 214 (225)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 142
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=43.76 E-value=98 Score=23.00 Aligned_cols=78 Identities=14% Similarity=0.072 Sum_probs=44.2
Q ss_pred HHHHHHHHHhcCCcEEEcCCccc-----c-CChHHHHHHHHc--CCEEEEeccCC-CHHHHHHHHHhcCccEEEeC--Ch
Q 040734 260 LEEAVKVCLEGGLQGIVSEVKGV-----F-RNPGAVTKIKES--KLSLLTYGRLN-NVAEAVYMQHLMGIDGVIVD--LV 328 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~~~-----~-~~~~~v~~~~~~--Gl~v~~w~Tvn-~~~~~~~~~~~~GVdgI~TD--~p 328 (361)
..++........++.+.++.... - ..-++++.+++. +..+.+. |-. +......++ ..|++++++- .+
T Consensus 36 ~~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~l-s~~~~~~~~~~~~-~~g~~~~l~kp~~~ 113 (140)
T 2qr3_A 36 PVSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLF-TAYADIDLAVRGI-KEGASDFVVKPWDN 113 (140)
T ss_dssp HHHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEE-EEGGGHHHHHHHH-HTTCCEEEEESCCH
T ss_pred HHHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEE-ECCCCHHHHHHHH-HcCchheeeCCCCH
Confidence 34455555555555555554321 0 123567777665 4777777 433 444455565 6999998863 45
Q ss_pred HHHHHHHHHhc
Q 040734 329 QEITEAVYDMI 339 (361)
Q Consensus 329 ~~~~~~l~~~~ 339 (361)
..+.+.++...
T Consensus 114 ~~l~~~l~~~~ 124 (140)
T 2qr3_A 114 QKLLETLLNAA 124 (140)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66666665543
No 143
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=43.64 E-value=88 Score=29.06 Aligned_cols=111 Identities=15% Similarity=0.012 Sum_probs=64.1
Q ss_pred HHHHHHHHHHCC-CCCEEEEccCCCccccccccccHHH---HHHHHHhcCCcEEEcCCccc----------cCChHHHHH
Q 040734 226 PDAAVLIRKLQS-TYPVFFLTNGGTEIFYDVRRNSLEE---AVKVCLEGGLQGIVSEVKGV----------FRNPGAVTK 291 (361)
Q Consensus 226 ~~~l~~l~~~~p-~~~~~~l~~~~~~~~~d~~~~~l~~---~~~~~~~~~~~~i~~~~~~~----------~~~~~~v~~ 291 (361)
.++++.+|+..+ ++|+++=.......... ....++ ..+.+.+.|++++++..... -....+++.
T Consensus 212 ~eiv~aVr~avg~d~pV~vRis~~~~~~~G--~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ 289 (363)
T 3l5l_A 212 LETLAAVREVWPENLPLTARFGVLEYDGRD--EQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAER 289 (363)
T ss_dssp HHHHHHHHTTSCTTSCEEEEEEEECSSSCH--HHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHH
T ss_pred HHHHHHHHHHcCCCceEEEEecchhcCCCC--CCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHH
Confidence 345666666654 56776543321100000 012233 33445567888887653210 012345666
Q ss_pred HHH-cCCEEEEeccCCCHHHHHHHHHhcC-ccEEEeCC-----hHHHHHHHHHhc
Q 040734 292 IKE-SKLSLLTYGRLNNVAEAVYMQHLMG-IDGVIVDL-----VQEITEAVYDMI 339 (361)
Q Consensus 292 ~~~-~Gl~v~~w~Tvn~~~~~~~~~~~~G-VdgI~TD~-----p~~~~~~l~~~~ 339 (361)
+++ .++.|++=|-+++++++++++ ..| +|+|.--+ |+...++.+.+.
T Consensus 290 ir~~~~iPVi~~GgI~s~e~a~~~l-~~G~aD~V~iGR~~lanPdl~~k~~~~lg 343 (363)
T 3l5l_A 290 VRREAKLPVTSAWGFGTPQLAEAAL-QANQLDLVSVGRAHLADPHWAYFAAKELG 343 (363)
T ss_dssp HHHHHTCCEEECSSTTSHHHHHHHH-HTTSCSEEECCHHHHHCTTHHHHHHHHTT
T ss_pred HHHHcCCcEEEeCCCCCHHHHHHHH-HCCCccEEEecHHHHhCchHHHHHHHHcC
Confidence 655 478888877788999999987 577 99998654 566666666654
No 144
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=43.39 E-value=1e+02 Score=25.60 Aligned_cols=52 Identities=10% Similarity=0.049 Sum_probs=38.4
Q ss_pred HHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeC---ChHHHHHHHHHhcC
Q 040734 288 AVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD---LVQEITEAVYDMIK 340 (361)
Q Consensus 288 ~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD---~p~~~~~~l~~~~~ 340 (361)
.++.++++|+++.+- |-+........+..+|++.++.. .|..+..+++++..
T Consensus 60 ~l~~L~~~G~~~~iv-T~~~~~~~~~~l~~lgi~~~~~~~k~k~~~~~~~~~~~~~ 114 (195)
T 3n07_A 60 GVKALMNAGIEIAII-TGRRSQIVENRMKALGISLIYQGQDDKVQAYYDICQKLAI 114 (195)
T ss_dssp HHHHHHHTTCEEEEE-CSSCCHHHHHHHHHTTCCEEECSCSSHHHHHHHHHHHHCC
T ss_pred HHHHHHHCCCEEEEE-ECcCHHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHHHhCC
Confidence 389999999999998 76766666666667899887753 45666666666543
No 145
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=43.25 E-value=12 Score=32.31 Aligned_cols=28 Identities=21% Similarity=0.170 Sum_probs=24.2
Q ss_pred cccchHHHHHHHHhCCCCEEEEeeeeecCCc
Q 040734 70 IKENSIASFNSSAKYPLDFIEFDVQVTKDGW 100 (361)
Q Consensus 70 ~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~ 100 (361)
.++++....+.+.+.|+++||+|+ +||.
T Consensus 21 d~~~~~~~i~~~~~~G~d~i~l~~---~dg~ 48 (230)
T 1rpx_A 21 NFSKLGEQVKAIEQAGCDWIHVDV---MDGR 48 (230)
T ss_dssp CGGGHHHHHHHHHHTTCCCEEEEE---EBSS
T ss_pred CHHHHHHHHHHHHHCCCCEEEEee---ccCC
Confidence 478999999999999999999999 4554
No 146
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=42.77 E-value=82 Score=29.34 Aligned_cols=61 Identities=20% Similarity=0.255 Sum_probs=42.8
Q ss_pred HHHHHHHhcCCcEEEcCCccccCC---hHHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhcCccEEEe
Q 040734 262 EAVKVCLEGGLQGIVSEVKGVFRN---PGAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLMGIDGVIV 325 (361)
Q Consensus 262 ~~~~~~~~~~~~~i~~~~~~~~~~---~~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T 325 (361)
+.++.+.+.+++.++++...- .. .+.++.+++. ++.|++- .+.+.++++.+. +.|+|+|..
T Consensus 108 e~a~~l~eaGad~I~ld~a~G-~~~~~~~~i~~i~~~~~~~Vivg-~v~t~e~A~~l~-~aGaD~I~V 172 (361)
T 3khj_A 108 ERAKLLVEAGVDVIVLDSAHG-HSLNIIRTLKEIKSKMNIDVIVG-NVVTEEATKELI-ENGADGIKV 172 (361)
T ss_dssp HHHHHHHHTTCSEEEECCSCC-SBHHHHHHHHHHHHHCCCEEEEE-EECSHHHHHHHH-HTTCSEEEE
T ss_pred HHHHHHHHcCcCeEEEeCCCC-CcHHHHHHHHHHHHhcCCcEEEc-cCCCHHHHHHHH-HcCcCEEEE
Confidence 334555677888887654321 01 2566777666 8888885 678888888886 699999986
No 147
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=42.74 E-value=50 Score=26.79 Aligned_cols=50 Identities=10% Similarity=0.082 Sum_probs=32.9
Q ss_pred HHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEe---CChHHHHHHHHHhc
Q 040734 288 AVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIV---DLVQEITEAVYDMI 339 (361)
Q Consensus 288 ~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T---D~p~~~~~~l~~~~ 339 (361)
+++.++++|+++.+- |-+........+..+|++ ++. +.|..+..+++++.
T Consensus 47 ~l~~L~~~g~~~~i~-T~~~~~~~~~~~~~lgi~-~~~~~~~k~~~l~~~~~~~~ 99 (176)
T 3mmz_A 47 GIAALRKSGLTMLIL-STEQNPVVAARARKLKIP-VLHGIDRKDLALKQWCEEQG 99 (176)
T ss_dssp HHHHHHHTTCEEEEE-ESSCCHHHHHHHHHHTCC-EEESCSCHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCeEEEE-ECcChHHHHHHHHHcCCe-eEeCCCChHHHHHHHHHHcC
Confidence 578888888888877 666665666665567887 554 34555556666554
No 148
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=42.62 E-value=70 Score=31.20 Aligned_cols=63 Identities=21% Similarity=0.221 Sum_probs=46.2
Q ss_pred HHHHHHHHhcCCcEEEcCCcccc--CChHHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEe
Q 040734 261 EEAVKVCLEGGLQGIVSEVKGVF--RNPGAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIV 325 (361)
Q Consensus 261 ~~~~~~~~~~~~~~i~~~~~~~~--~~~~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T 325 (361)
.+....+.+.|++.+.++...-. ...+.++.+++. ++.|.+- .+.+.+++..+. +.|+|+|..
T Consensus 257 ~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~-~v~t~~~a~~l~-~aGad~I~v 323 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGG-NVVTAAQAKNLI-DAGVDGLRV 323 (514)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEE-EECSHHHHHHHH-HHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEec-ccchHHHHHHHH-HcCCCEEEE
Confidence 34445566789999887544210 123779999998 8999886 688888888886 699999965
No 149
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=42.38 E-value=1.4e+02 Score=28.35 Aligned_cols=67 Identities=12% Similarity=0.123 Sum_probs=48.8
Q ss_pred HHHHHHHHHhcCCcEEEcCCcccc---------------------CChHHHHHHHHc---CCEEEEeccCCCHHHHHHHH
Q 040734 260 LEEAVKVCLEGGLQGIVSEVKGVF---------------------RNPGAVTKIKES---KLSLLTYGRLNNVAEAVYMQ 315 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~~~~---------------------~~~~~v~~~~~~---Gl~v~~w~Tvn~~~~~~~~~ 315 (361)
+.+..+.+.+.|+++|++.-.... ..-++|..++++ .+.|+.=|-|.+.+++.+++
T Consensus 285 i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l 364 (415)
T 3i65_A 285 KKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKI 364 (415)
T ss_dssp HHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHH
T ss_pred HHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHH
Confidence 566677778889998876643210 011567777765 48898888899999999987
Q ss_pred HhcCccEEEeCC
Q 040734 316 HLMGIDGVIVDL 327 (361)
Q Consensus 316 ~~~GVdgI~TD~ 327 (361)
..|+|+|+.-.
T Consensus 365 -~aGAd~VqIgr 375 (415)
T 3i65_A 365 -EAGASVCQLYS 375 (415)
T ss_dssp -HHTEEEEEESH
T ss_pred -HcCCCEEEEcH
Confidence 59999998544
No 150
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=42.31 E-value=82 Score=29.43 Aligned_cols=63 Identities=11% Similarity=0.122 Sum_probs=44.3
Q ss_pred HHHHHHHHhcCCcEEEcCCcccc--CChHHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEe
Q 040734 261 EEAVKVCLEGGLQGIVSEVKGVF--RNPGAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIV 325 (361)
Q Consensus 261 ~~~~~~~~~~~~~~i~~~~~~~~--~~~~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T 325 (361)
.+.++.+.+.|++.+.++...-. ...+.|+.+++. ++.|++= .+.+.++.+.+. +.|+|+|..
T Consensus 102 ~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G-~V~T~e~A~~a~-~aGaD~I~V 168 (361)
T 3r2g_A 102 LQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAG-NVATYAGADYLA-SCGADIIKA 168 (361)
T ss_dssp HHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEE-EECSHHHHHHHH-HTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEc-CcCCHHHHHHHH-HcCCCEEEE
Confidence 34455666778888776532110 012578889887 7888885 688899988886 699999985
No 151
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=41.99 E-value=1.2e+02 Score=26.76 Aligned_cols=72 Identities=14% Similarity=0.157 Sum_probs=44.5
Q ss_pred HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEe
Q 040734 226 PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTY 302 (361)
Q Consensus 226 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w 302 (361)
.+.++.+|+..+++|+.++....+ +.....+..++.+...|++++..+--..--...+++.++++|+.+...
T Consensus 82 ~~~v~~ir~~~~~~Pv~lm~y~n~-----v~~~g~~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l 153 (268)
T 1qop_A 82 FEMLAIIREKHPTIPIGLLMYANL-----VFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFI 153 (268)
T ss_dssp HHHHHHHHHHCSSSCEEEEECHHH-----HHTTCHHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECE
T ss_pred HHHHHHHHhcCCCCCEEEEEcccH-----HHHhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEE
Confidence 466778887766788766532110 111234556666778899977765322112457889999999886544
No 152
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=41.60 E-value=56 Score=28.53 Aligned_cols=66 Identities=12% Similarity=0.109 Sum_probs=43.2
Q ss_pred HHHHHHHHhcCCcEEEcCC-c----cccCChHHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 261 EEAVKVCLEGGLQGIVSEV-K----GVFRNPGAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 261 ~~~~~~~~~~~~~~i~~~~-~----~~~~~~~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
.+..+.+.+.|+..+.+.- . ..-.+.+.++.+++. ++++.+-+.+++.+++..++ ..|+|+|+...
T Consensus 33 ~~~a~~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~-~~Gad~v~lg~ 104 (266)
T 2w6r_A 33 RDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAF-LAGADKALAAS 104 (266)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTSSCSSCCCHHHHHHHGGGCCSCEEEESCCCSTHHHHHHH-HHTCSEEECCC
T ss_pred HHHHHHHHHCCCCEEEEEecCcccCCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHH-HcCCcHhhhhH
Confidence 3444445566666655421 0 001235777777654 78898876789999998886 69999998753
No 153
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=41.60 E-value=1.3e+02 Score=28.09 Aligned_cols=94 Identities=15% Similarity=0.208 Sum_probs=63.0
Q ss_pred cCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcc------ccCChHHHHHHHH-c
Q 040734 223 TFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKG------VFRNPGAVTKIKE-S 295 (361)
Q Consensus 223 Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~------~~~~~~~v~~~~~-~ 295 (361)
.++++.++.+++.. +.|+..-.- .+.+ ..+.+.+.|+++|.+.... -..+-+.+..+++ .
T Consensus 211 ~~~~~~i~~i~~~~-~~Pv~vkgv-----------~t~e-~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~ 277 (380)
T 1p4c_A 211 SFNWEALRWLRDLW-PHKLLVKGL-----------LSAE-DADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKT 277 (380)
T ss_dssp TCCHHHHHHHHHHC-CSEEEEEEE-----------CCHH-HHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHH
T ss_pred cccHHHHHHHHHhc-CCCEEEEec-----------CcHH-HHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHc
Confidence 46788999998876 466643210 1233 3455667899988763211 0112345555544 4
Q ss_pred CCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHH
Q 040734 296 KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQE 330 (361)
Q Consensus 296 Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~ 330 (361)
+..|++-|-|.+..++.+++ .+|+|+|+.-++-.
T Consensus 278 ~~pVia~GGI~~~~dv~kal-~~GAdaV~iGr~~l 311 (380)
T 1p4c_A 278 GKPVLIDSGFRRGSDIVKAL-ALGAEAVLLGRATL 311 (380)
T ss_dssp CSCEEECSSCCSHHHHHHHH-HTTCSCEEESHHHH
T ss_pred CCeEEEECCCCCHHHHHHHH-HhCCcHhhehHHHH
Confidence 67999988899999999997 59999999988754
No 154
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=41.27 E-value=1.6e+02 Score=25.31 Aligned_cols=110 Identities=10% Similarity=0.014 Sum_probs=59.8
Q ss_pred cCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccc-cCChHHHHHHHHcCCEEEE
Q 040734 223 TFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGV-FRNPGAVTKIKESKLSLLT 301 (361)
Q Consensus 223 Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~-~~~~~~v~~~~~~Gl~v~~ 301 (361)
+|.+..++.+++. ++.++.+-... .|.. ++....++.+.+.|++.+.++...- -.-..+++.+++.|..|.+
T Consensus 50 ~~G~~~v~~l~~~-~g~~v~lD~Kl-----~Dip-nTv~~~~~~~~~~gad~vtvh~~~G~~~l~~~~~~~~~~g~~v~v 122 (228)
T 3m47_A 50 SEGMDIIAEFRKR-FGCRIIADFKV-----ADIP-ETNEKICRATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFL 122 (228)
T ss_dssp HHCTHHHHHHHHH-HCCEEEEEEEE-----CSCH-HHHHHHHHHHHHTTCSEEEEESTTCHHHHHHHHHHHHHHTCEEEE
T ss_pred hcCHHHHHHHHhc-CCCeEEEEEee-----cccH-hHHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcCCCeEE
Confidence 4566777888774 24444332211 1221 1233344555578888887765421 0113456667777887766
Q ss_pred eccCCCH----------HHHHHHHHhcCccEEEeCC--hHHHHHHHHHhc
Q 040734 302 YGRLNNV----------AEAVYMQHLMGIDGVIVDL--VQEITEAVYDMI 339 (361)
Q Consensus 302 w~Tvn~~----------~~~~~~~~~~GVdgI~TD~--p~~~~~~l~~~~ 339 (361)
=+...++ ..+.++..+.|++|+++-. |..+.++++...
T Consensus 123 Lt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~at~~~e~~~ir~~~~ 172 (228)
T 3m47_A 123 LTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRLREIIG 172 (228)
T ss_dssp ECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEECCSSCHHHHHHHHHHHC
T ss_pred EEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEECCCChHHHHHHHHhcC
Confidence 4111221 1122334468999999864 777776666554
No 155
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=41.10 E-value=61 Score=26.60 Aligned_cols=51 Identities=8% Similarity=0.075 Sum_probs=34.7
Q ss_pred HHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeC---ChHHHHHHHHHhc
Q 040734 288 AVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD---LVQEITEAVYDMI 339 (361)
Q Consensus 288 ~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD---~p~~~~~~l~~~~ 339 (361)
.++.++++|+++.+- |-+....+...+..+|++.++.. .|..+..+++++.
T Consensus 54 ~l~~L~~~g~~~~i~-T~~~~~~~~~~~~~lgl~~~f~~~~~K~~~~~~~~~~~g 107 (189)
T 3mn1_A 54 GIKMLIASGVTTAII-SGRKTAIVERRAKSLGIEHLFQGREDKLVVLDKLLAELQ 107 (189)
T ss_dssp HHHHHHHTTCEEEEE-CSSCCHHHHHHHHHHTCSEEECSCSCHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCEEEEE-ECcChHHHHHHHHHcCCHHHhcCcCChHHHHHHHHHHcC
Confidence 678888888888888 66666666666656788777653 4555555555544
No 156
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=40.48 E-value=43 Score=29.15 Aligned_cols=87 Identities=14% Similarity=0.133 Sum_probs=53.0
Q ss_pred cCCHHHHHHHHHHCCCCCE--EEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcc-ccCChHHHHHHHHcCCEE
Q 040734 223 TFQPDAAVLIRKLQSTYPV--FFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKG-VFRNPGAVTKIKESKLSL 299 (361)
Q Consensus 223 Sf~~~~l~~l~~~~p~~~~--~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~-~~~~~~~v~~~~~~Gl~v 299 (361)
+|.+..++.+|+.. +.+. -+.+.. + ...++.+.+.|++++.++... ..-..+.++.+|++|+++
T Consensus 43 t~G~~~v~~lr~~~-~~~~dvhLmv~d-p-----------~~~i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k~ 109 (231)
T 3ctl_A 43 TLSPFFVSQVKKLA-TKPLDCHLMVTR-P-----------QDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKV 109 (231)
T ss_dssp CBCHHHHHHHHTTC-CSCEEEEEESSC-G-----------GGTHHHHHHHTCSEEEECGGGCTTTHHHHHHHHHHTTCEE
T ss_pred hhcHHHHHHHHhcc-CCcEEEEEEecC-H-----------HHHHHHHHHcCCCEEEECcccCCccHHHHHHHHHHcCCeE
Confidence 68899999999874 4443 233321 1 111244557889998877654 212357899999999998
Q ss_pred EEeccCCCHHH-HHHHHHhcCccEEE
Q 040734 300 LTYGRLNNVAE-AVYMQHLMGIDGVI 324 (361)
Q Consensus 300 ~~w~Tvn~~~~-~~~~~~~~GVdgI~ 324 (361)
.+-....++.+ +++++ -++|.|.
T Consensus 110 gv~lnp~tp~~~~~~~l--~~~D~Vl 133 (231)
T 3ctl_A 110 GLILNPETPVEAMKYYI--HKADKIT 133 (231)
T ss_dssp EEEECTTCCGGGGTTTG--GGCSEEE
T ss_pred EEEEECCCcHHHHHHHH--hcCCEEE
Confidence 76512334433 33332 4788775
No 157
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=40.26 E-value=81 Score=27.12 Aligned_cols=82 Identities=15% Similarity=0.148 Sum_probs=46.6
Q ss_pred HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccC
Q 040734 226 PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRL 305 (361)
Q Consensus 226 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tv 305 (361)
.+.++.+++.. +.|+.+...... .......+.++.+...|+++++++.........+++.+++.|..+..--..
T Consensus 69 ~~~i~~i~~~~-~~pv~~~~~~~~-----~~~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~ 142 (248)
T 1geq_A 69 FWIVKEFRRHS-STPIVLMTYYNP-----IYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAP 142 (248)
T ss_dssp HHHHHHHHTTC-CCCEEEEECHHH-----HHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECT
T ss_pred HHHHHHHHhhC-CCCEEEEeccch-----hhhcCHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECC
Confidence 56777777663 567665442100 000123455667778899999876422111237778889999887654134
Q ss_pred CCHHHHHH
Q 040734 306 NNVAEAVY 313 (361)
Q Consensus 306 n~~~~~~~ 313 (361)
.++.+..+
T Consensus 143 ~t~~e~~~ 150 (248)
T 1geq_A 143 NTPDERLK 150 (248)
T ss_dssp TCCHHHHH
T ss_pred CCHHHHHH
Confidence 45444433
No 158
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A*
Probab=39.49 E-value=80 Score=31.65 Aligned_cols=43 Identities=19% Similarity=0.171 Sum_probs=30.6
Q ss_pred hHHHHHHHHcCCEEEEecc--CCC--------------------HH-HHHHHHHhcCccEEEeCChH
Q 040734 286 PGAVTKIKESKLSLLTYGR--LNN--------------------VA-EAVYMQHLMGIDGVIVDLVQ 329 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~T--vn~--------------------~~-~~~~~~~~~GVdgI~TD~p~ 329 (361)
+.+++++|++|+++..|.. ..+ .+ +++.+ .++|||+|=.|+..
T Consensus 80 ~~l~~~i~~~Glk~gi~~~~~~~~~~~~~p~~~~~~pg~g~~~~~~~~~~~~-~~wGvd~lK~D~~~ 145 (614)
T 3a21_A 80 SAITAYIHSKGLKAGIYTDAGKDGCGYYYPTGRPAAPGSGSEGHYDQDMLQF-STWGFDFVKVDWCG 145 (614)
T ss_dssp HHHHHHHHHTTCEEEEEEESSSSCHHHHSCSSSCCCTTCSCTTCHHHHHHHH-HHHTCSEEEEECHH
T ss_pred HHHHHHHHHCCCeeEEEecCCCccccccCCCCCCCCCchhhHHHHHHHHHHH-HHcCCcEEEecccC
Confidence 4789999999999999831 111 12 23334 47999999999864
No 159
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=39.46 E-value=72 Score=25.78 Aligned_cols=53 Identities=4% Similarity=-0.053 Sum_probs=30.5
Q ss_pred hHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEe---CChHHHHHHHHHhc
Q 040734 286 PGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIV---DLVQEITEAVYDMI 339 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T---D~p~~~~~~l~~~~ 339 (361)
.+.++.++++|+++.+- |-+........+..+|++.++. +.|..+..+++++.
T Consensus 41 ~~~l~~L~~~G~~~~i~-Tg~~~~~~~~~~~~lgl~~~~~~~k~k~~~~~~~~~~~~ 96 (180)
T 1k1e_A 41 GLGIKMLMDADIQVAVL-SGRDSPILRRRIADLGIKLFFLGKLEKETACFDLMKQAG 96 (180)
T ss_dssp HHHHHHHHHTTCEEEEE-ESCCCHHHHHHHHHHTCCEEEESCSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCeEEEE-eCCCcHHHHHHHHHcCCceeecCCCCcHHHHHHHHHHcC
Confidence 35677777777777777 5555555555544567766654 23444444555443
No 160
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=39.20 E-value=96 Score=26.64 Aligned_cols=65 Identities=11% Similarity=0.052 Sum_probs=44.4
Q ss_pred HHHHHHHHhcCCcEEEcCCcc---c--cCChHHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhcCccEEEeC
Q 040734 261 EEAVKVCLEGGLQGIVSEVKG---V--FRNPGAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD 326 (361)
Q Consensus 261 ~~~~~~~~~~~~~~i~~~~~~---~--~~~~~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD 326 (361)
.+..+.+...|+..+..+... . -.+.++++++++. +++|++-|-+++++++.+++ ..|+||++.-
T Consensus 155 ~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~~~ipvia~GGI~~~~d~~~~~-~~Gadgv~vg 225 (252)
T 1ka9_F 155 VEWAVKGVELGAGEILLTSMDRDGTKEGYDLRLTRMVAEAVGVPVIASGGAGRMEHFLEAF-QAGAEAALAA 225 (252)
T ss_dssp HHHHHHHHHHTCCEEEEEETTTTTTCSCCCHHHHHHHHHHCSSCEEEESCCCSHHHHHHHH-HTTCSEEEES
T ss_pred HHHHHHHHHcCCCEEEEecccCCCCcCCCCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHH-HCCCHHHHHH
Confidence 344455566777766543111 0 1235677777664 78999887899999999987 5999999863
No 161
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=39.15 E-value=91 Score=29.58 Aligned_cols=34 Identities=9% Similarity=0.189 Sum_probs=28.7
Q ss_pred HHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 293 KESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 293 ~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
++.+++|++-|-+.+..++.+++ .+|+|+|+.-.
T Consensus 243 ~~~~IPVIA~GGI~~~~di~kal-alGAd~V~vGt 276 (400)
T 3ffs_A 243 SKFGIPIIADGGIRYSGDIGKAL-AVGASSVMIGS 276 (400)
T ss_dssp TTTTCCEEEESCCCSHHHHHHHH-TTTCSEEEECG
T ss_pred HhcCCCEEecCCCCCHHHHHHHH-HcCCCEEEECh
Confidence 34589999988899999999987 69999998654
No 162
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=39.00 E-value=79 Score=25.79 Aligned_cols=51 Identities=6% Similarity=0.018 Sum_probs=31.4
Q ss_pred HHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEe---CChHHHHHHHHHhc
Q 040734 288 AVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIV---DLVQEITEAVYDMI 339 (361)
Q Consensus 288 ~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T---D~p~~~~~~l~~~~ 339 (361)
.++.++++|+++++- |-+........+..+|++.++. +.|..+..+++++.
T Consensus 61 ~l~~L~~~g~~v~iv-T~~~~~~~~~~l~~lgl~~~~~~~kpk~~~~~~~~~~~g 114 (188)
T 2r8e_A 61 GIRCALTSDIEVAII-TGRKAKLVEDRCATLGITHLYQGQSNKLIAFSDLLEKLA 114 (188)
T ss_dssp HHHHHHTTTCEEEEE-CSSCCHHHHHHHHHHTCCEEECSCSCSHHHHHHHHHHHT
T ss_pred HHHHHHHCCCeEEEE-eCCChHHHHHHHHHcCCceeecCCCCCHHHHHHHHHHcC
Confidence 577777777777777 6555555555555567776664 34555555555544
No 163
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*
Probab=39.00 E-value=84 Score=29.89 Aligned_cols=41 Identities=22% Similarity=0.199 Sum_probs=30.3
Q ss_pred hHHHHHHHHcCCEEEEeccCCC--------------HHHHHHHHHhcCccEEEeCCh
Q 040734 286 PGAVTKIKESKLSLLTYGRLNN--------------VAEAVYMQHLMGIDGVIVDLV 328 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tvn~--------------~~~~~~~~~~~GVdgI~TD~p 328 (361)
+.+++++|++|+++..| +-.. ..+.+.+ .++|||+|=.|+.
T Consensus 80 ~~l~~~i~~~Glk~Giw-~~~g~~~c~~~Pgs~~~~~~d~~~~-~~wGvdylK~D~~ 134 (417)
T 1szn_A 80 DGLAKKVHALGLKLGIY-STAGTATCAGYPASLGYEDVDAADF-ADWGVDYLKYDNC 134 (417)
T ss_dssp HHHHHHHHHTTCEEEEE-EESSSBCTTSCBCCTTCHHHHHHHH-HHTTCCEEEEECC
T ss_pred HHHHHHHHHcCCEEEEE-eCCCCchhccCcchHhHHHHHHHHH-HHcCCCEEEECCC
Confidence 47899999999999999 4211 1233344 4799999999876
No 164
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=38.55 E-value=90 Score=26.83 Aligned_cols=51 Identities=24% Similarity=0.289 Sum_probs=37.2
Q ss_pred HHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhcCccEEEeCC-----hHHHHHHHHHh
Q 040734 287 GAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL-----VQEITEAVYDM 338 (361)
Q Consensus 287 ~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~-----p~~~~~~l~~~ 338 (361)
+.++.+++. +++|.+-+-+++.++++.++ ..|+|+|+... |..+.++++.+
T Consensus 65 ~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~-~~Gad~V~lg~~~l~~p~~~~~~~~~~ 121 (252)
T 1ka9_F 65 DVVARVAERVFIPLTVGGGVRSLEDARKLL-LSGADKVSVNSAAVRRPELIRELADHF 121 (252)
T ss_dssp HHHHHHHTTCCSCEEEESSCCSHHHHHHHH-HHTCSEEEECHHHHHCTHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEECCcCCHHHHHHHH-HcCCCEEEEChHHHhCcHHHHHHHHHc
Confidence 446666554 78888766799999998887 68999998765 44466666554
No 165
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=38.24 E-value=1.3e+02 Score=22.84 Aligned_cols=113 Identities=8% Similarity=0.092 Sum_probs=63.5
Q ss_pred CEEEEcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCC-hHHHHHHHHc-
Q 040734 218 PIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRN-PGAVTKIKES- 295 (361)
Q Consensus 218 rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~-~~~v~~~~~~- 295 (361)
+|++..-+......++.......-.+.... ..+..++...+....++.+.++...--.+ -++++.+++.
T Consensus 22 ~iLivdd~~~~~~~l~~~L~~~~~~~~v~~---------~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~ 92 (150)
T 4e7p_A 22 KVLVAEDQSMLRDAMCQLLTLQPDVESVLQ---------AKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEK 92 (150)
T ss_dssp EEEEECSCHHHHHHHHHHHHTSTTEEEEEE---------ESSHHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTT
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCcEEEEE---------ECCHHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhC
Confidence 566666666666666554332221110000 12345556666666666666665432112 3677777775
Q ss_pred -CCEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHHHHHhcC
Q 040734 296 -KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEAVYDMIK 340 (361)
Q Consensus 296 -Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~~~~~ 340 (361)
...+.+.+.-.+.....+++ ..|+++++.- .+..+.+.++....
T Consensus 93 ~~~~ii~ls~~~~~~~~~~~~-~~g~~~~l~Kp~~~~~l~~~i~~~~~ 139 (150)
T 4e7p_A 93 LETKVVVVTTFKRAGYFERAV-KAGVDAYVLKERSIADLMQTLHTVLE 139 (150)
T ss_dssp CSCEEEEEESCCCHHHHHHHH-HTTCSEEEETTSCHHHHHHHHHHHHT
T ss_pred CCCeEEEEeCCCCHHHHHHHH-HCCCcEEEecCCCHHHHHHHHHHHHc
Confidence 47778873334555566665 6999999873 55666666665443
No 166
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=38.23 E-value=1.2e+02 Score=26.94 Aligned_cols=40 Identities=18% Similarity=0.255 Sum_probs=25.5
Q ss_pred hHHHHHHHHc-CCEEEEe--ccCCCHHHHHHHHHhcCccEEEe
Q 040734 286 PGAVTKIKES-KLSLLTY--GRLNNVAEAVYMQHLMGIDGVIV 325 (361)
Q Consensus 286 ~~~v~~~~~~-Gl~v~~w--~Tvn~~~~~~~~~~~~GVdgI~T 325 (361)
.+.++.+++. ++.|.+= ..+.+..++.+.+.+.|+|+|+.
T Consensus 153 ~eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v 195 (311)
T 1ep3_A 153 AALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTM 195 (311)
T ss_dssp HHHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcCCCEEEE
Confidence 4677788877 8877651 02345455434334799999986
No 167
>2yxx_A Diaminopimelate decarboxylase; TM1517, TIM beta/alpha barrel fold, lyase, structural genomi NPPSFA; HET: PLP; 1.70A {Thermotoga maritima}
Probab=37.83 E-value=2.4e+02 Score=25.88 Aligned_cols=91 Identities=14% Similarity=0.091 Sum_probs=57.2
Q ss_pred HHHHHHHHCCCC--CEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCC--E-EEEe
Q 040734 228 AAVLIRKLQSTY--PVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKL--S-LLTY 302 (361)
Q Consensus 228 ~l~~l~~~~p~~--~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl--~-v~~w 302 (361)
.++.+++..|.. .+.+..... ......+...+.|+ ++.+. +..-+..+++.|+ . +..+
T Consensus 26 N~~~l~~~~~~~~~~i~~avKAn----------~~~~v~~~l~~~G~-g~~va------s~~E~~~~~~~G~~~~~Il~~ 88 (386)
T 2yxx_A 26 RSRLVKEVFEGVNLLPTFAVKAN----------NNPVLLKILREEGF-GMDVV------TKGELLAAKLAGVPSHTVVWN 88 (386)
T ss_dssp HHHHHHHHTTTSCEEEEEEGGGC----------CCHHHHHHHHHTTC-EEEEC------SHHHHHHHHHTTCCGGGEEEC
T ss_pred HHHHHHHhhccCCceEEEEEeeC----------CCHHHHHHHHHcCC-eEEEc------CHHHHHHHHHcCCChhhEEEe
Confidence 344566666643 344444332 23345566667776 65432 5566777888887 4 6666
Q ss_pred ccCCCHHHHHHHHHhcCccEEEeCChHHHHHHHH
Q 040734 303 GRLNNVAEAVYMQHLMGIDGVIVDLVQEITEAVY 336 (361)
Q Consensus 303 ~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~~l~ 336 (361)
+...++++++.++ ..|+..++.|..+.+..+.+
T Consensus 89 ~~~k~~~~l~~a~-~~~v~~~~vds~~el~~l~~ 121 (386)
T 2yxx_A 89 GNGKSRDQMEHFL-REDVRIVNVDSFEEMEIWRE 121 (386)
T ss_dssp CSCCCHHHHHHHH-HTTCCEEEECCHHHHHHHHH
T ss_pred CCCCCHHHHHHHH-HCCCCEEEeCCHHHHHHHHH
Confidence 4445778887776 58887788888888876654
No 168
>2o0t_A Diaminopimelate decarboxylase; PLP binding enzyme, lysine biosynthesis, STRU genomics, TB structural genomics consortium, TBSGC; HET: LLP; 2.33A {Mycobacterium tuberculosis} PDB: 1hkv_A* 1hkw_A
Probab=37.51 E-value=1.8e+02 Score=27.75 Aligned_cols=89 Identities=17% Similarity=0.118 Sum_probs=55.5
Q ss_pred HHHHHHC-CCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCC---EEEEeccC
Q 040734 230 VLIRKLQ-STYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKL---SLLTYGRL 305 (361)
Q Consensus 230 ~~l~~~~-p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl---~v~~w~Tv 305 (361)
+.+++.. ++..+.+..... ......+...+.|+ ++.+ .+..-+..+++.|+ +++..+..
T Consensus 57 ~~l~~~~~~~~~i~~avKan----------~~~~v~~~l~~~G~-g~~v------as~~E~~~~~~~G~~~~~I~~~g~~ 119 (467)
T 2o0t_A 57 RETAAAFGSGANVHYAAKAF----------LCSEVARWISEEGL-CLDV------CTGGELAVALHASFPPERITLHGNN 119 (467)
T ss_dssp HHHHHHTSSGGGBEEEGGGC----------CCHHHHHHHHHHTC-EEEE------CSHHHHHHHHHTTCCGGGEEECCTT
T ss_pred HHHHHhcCCCcEEEEEeccC----------CCHHHHHHHHHcCC-eEEE------eCHHHHHHHHHcCCCcccEEEeCCC
Confidence 3445544 445555554432 22344555556676 5542 25566777788886 35555344
Q ss_pred CCHHHHHHHHHhcCccEEEeCChHHHHHHHH
Q 040734 306 NNVAEAVYMQHLMGIDGVIVDLVQEITEAVY 336 (361)
Q Consensus 306 n~~~~~~~~~~~~GVdgI~TD~p~~~~~~l~ 336 (361)
.+++++++++ ..||+.+..|....+..+-+
T Consensus 120 k~~~~i~~a~-~~gv~~i~vds~~el~~l~~ 149 (467)
T 2o0t_A 120 KSVSELTAAV-KAGVGHIVVDSMTEIERLDA 149 (467)
T ss_dssp CCHHHHHHHH-HHTCSEEEECSHHHHHHHHH
T ss_pred CCHHHHHHHH-HCCCCEEEECCHHHHHHHHH
Confidence 5778888876 58998888999888876643
No 169
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=37.34 E-value=46 Score=26.67 Aligned_cols=43 Identities=14% Similarity=0.211 Sum_probs=22.4
Q ss_pred hHHHHHHHHcCCEEEEeccCCC---HHHHHHHHHhcCc--cEEEeCChH
Q 040734 286 PGAVTKIKESKLSLLTYGRLNN---VAEAVYMQHLMGI--DGVIVDLVQ 329 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tvn~---~~~~~~~~~~~GV--dgI~TD~p~ 329 (361)
.+.++.++++|..++.+ |-.. ...+...+...|+ +.|..|.|+
T Consensus 30 ~~al~~l~~~G~~iii~-TgR~~~~~~~~~~~l~~~gi~~~~I~~n~P~ 77 (142)
T 2obb_A 30 VETLKLLQQEKHRLILW-SVREGELLDEAIEWCRARGLEFYAANKDYPE 77 (142)
T ss_dssp HHHHHHHHHTTCEEEEC-CSCCHHHHHHHHHHHHTTTCCCSEESSSSTT
T ss_pred HHHHHHHHHCCCEEEEE-eCCCcccHHHHHHHHHHcCCCeEEEEcCCch
Confidence 45666666777777777 6554 2222222334454 344445555
No 170
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=37.00 E-value=2.9e+02 Score=26.44 Aligned_cols=92 Identities=11% Similarity=0.126 Sum_probs=59.0
Q ss_pred HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCc------------cccCCh----HHH
Q 040734 226 PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVK------------GVFRNP----GAV 289 (361)
Q Consensus 226 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~------------~~~~~~----~~v 289 (361)
.+.++.+++..|.+|+. ... + .+. +....+...|++++.+... +-..+. +..
T Consensus 262 ~~~i~~l~~~~p~~pvi--~G~-------v--~t~-~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~ 329 (491)
T 1zfj_A 262 LRKIAEIRAHFPNRTLI--AGN-------I--ATA-EGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAA 329 (491)
T ss_dssp HHHHHHHHHHCSSSCEE--EEE-------E--CSH-HHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCcEe--CCC-------c--cCH-HHHHHHHHcCCCEEEECccCCcceEEeeecCCCCCcHHHHHHHH
Confidence 35677788888888876 111 0 112 2334556788888855320 000112 333
Q ss_pred HHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHH
Q 040734 290 TKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQE 330 (361)
Q Consensus 290 ~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~ 330 (361)
..+++.++.|++=|-+.+..++.+++ .+|+|+++.-.+-.
T Consensus 330 ~~~~~~~ipvia~GGi~~~~di~kal-~~GA~~v~vG~~~~ 369 (491)
T 1zfj_A 330 AVAREYGKTIIADGGIKYSGDIVKAL-AAGGNAVMLGSMFA 369 (491)
T ss_dssp HHHHHTTCEEEEESCCCSHHHHHHHH-HTTCSEEEESTTTT
T ss_pred HHHhhcCCCEEeeCCCCCHHHHHHHH-HcCCcceeeCHHhh
Confidence 33345789999988899999999997 69999999977653
No 171
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=36.98 E-value=69 Score=27.54 Aligned_cols=52 Identities=15% Similarity=0.145 Sum_probs=37.8
Q ss_pred ChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCC-----hHHHHHHHHHh
Q 040734 285 NPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL-----VQEITEAVYDM 338 (361)
Q Consensus 285 ~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~-----p~~~~~~l~~~ 338 (361)
+-+.++.+++.+++|.+-|-+++.+++..++ ..|+|+|+... |+.+.++ +.+
T Consensus 62 ~~~~i~~i~~~~ipvi~~Ggi~~~~~~~~~~-~~Gad~V~lg~~~l~~p~~~~~~-~~~ 118 (241)
T 1qo2_A 62 NLPVLEKLSEFAEHIQIGGGIRSLDYAEKLR-KLGYRRQIVSSKVLEDPSFLKSL-REI 118 (241)
T ss_dssp THHHHHHGGGGGGGEEEESSCCSHHHHHHHH-HTTCCEEEECHHHHHCTTHHHHH-HTT
T ss_pred hHHHHHHHHhcCCcEEEECCCCCHHHHHHHH-HCCCCEEEECchHhhChHHHHHH-HHc
Confidence 3455666554578898887899999998886 69999999754 4556666 554
No 172
>2plj_A Lysine/ornithine decarboxylase; type IV decarboxylase, beta/alpha barrel, beta barrel, lyase; HET: P3T; 1.70A {Vibrio vulnificus} PDB: 2plk_A*
Probab=36.68 E-value=1.5e+02 Score=27.88 Aligned_cols=47 Identities=15% Similarity=0.187 Sum_probs=21.5
Q ss_pred hHHHHHHHHcCC---EEEEeccCCCHHHHHHHHHhcCccEEEeCChHHHHH
Q 040734 286 PGAVTKIKESKL---SLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEITE 333 (361)
Q Consensus 286 ~~~v~~~~~~Gl---~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~ 333 (361)
..-+..+++.|+ .+...+...++++++.++ ..|+..++.|..+.+..
T Consensus 109 ~~E~~~~r~~G~~~~~Il~~g~~k~~~~l~~a~-~~~v~~~~vds~~el~~ 158 (419)
T 2plj_A 109 TGEVELVASEGVPADLTIHTHPIKRDADIRDAL-AYGCNVFVVDNLNELEK 158 (419)
T ss_dssp HHHHHHHHHTTCCGGGEEECCSSCCHHHHHHHH-HHTCCEEEECSHHHHHT
T ss_pred HHHHHHHHHcCCChhhEEEeCCCCCHHHHHHHH-HCCCCEEEeCCHHHHHH
Confidence 344445555554 233332233445554443 35554455555555543
No 173
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=36.49 E-value=17 Score=32.62 Aligned_cols=41 Identities=15% Similarity=0.027 Sum_probs=31.4
Q ss_pred hHHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 286 PGAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 286 ~~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
.++++++++. .+.|.+=+-+++++++++.+ ..|+||++.-.
T Consensus 195 ~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~-~~gADgvVVGS 236 (267)
T 3vnd_A 195 ENILTQLAEFNAPPPLLGFGIAEPEQVRAAI-KAGAAGAISGS 236 (267)
T ss_dssp HHHHHHHHTTTCCCEEECSSCCSHHHHHHHH-HTTCSEEEECH
T ss_pred HHHHHHHHHhcCCCEEEECCcCCHHHHHHHH-HcCCCEEEECH
Confidence 4778888775 46776654799999998665 58999999875
No 174
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=36.33 E-value=72 Score=29.86 Aligned_cols=61 Identities=16% Similarity=0.245 Sum_probs=43.2
Q ss_pred HHHHHHHhcCCcEEEcCCccccCCh---HHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEe
Q 040734 262 EAVKVCLEGGLQGIVSEVKGVFRNP---GAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIV 325 (361)
Q Consensus 262 ~~~~~~~~~~~~~i~~~~~~~~~~~---~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T 325 (361)
+.++.+.+.+++.++++...- ..+ +.++.++++ ++.|++- ++.+.++++++. +.|+|+|..
T Consensus 111 ~~~~~lieaGvd~I~idta~G-~~~~~~~~I~~ik~~~p~v~Vi~G-~v~t~e~A~~a~-~aGAD~I~v 176 (366)
T 4fo4_A 111 ERVKALVEAGVDVLLIDSSHG-HSEGVLQRIRETRAAYPHLEIIGG-NVATAEGARALI-EAGVSAVKV 176 (366)
T ss_dssp HHHHHHHHTTCSEEEEECSCT-TSHHHHHHHHHHHHHCTTCEEEEE-EECSHHHHHHHH-HHTCSEEEE
T ss_pred HHHHHHHhCCCCEEEEeCCCC-CCHHHHHHHHHHHHhcCCCceEee-eeCCHHHHHHHH-HcCCCEEEE
Confidence 345566678898887643211 122 456678777 7888776 788999998886 699999987
No 175
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=36.02 E-value=55 Score=27.61 Aligned_cols=105 Identities=10% Similarity=-0.009 Sum_probs=59.0
Q ss_pred EcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHc-CCEEE
Q 040734 222 STFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKES-KLSLL 300 (361)
Q Consensus 222 ~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~-Gl~v~ 300 (361)
.+|.+..++.+|+.. +.++.+-... .|+. .+....++.+.+.|++.+.++... ....++.+++. |+.+.
T Consensus 36 ~~~G~~~i~~lr~~~-~~~v~~D~kl-----~DI~-~t~~~~v~~~~~~Gad~vtvh~~~---g~~~i~~~~~~~gv~vl 105 (208)
T 2czd_A 36 LGSGVDIIRRLKEET-GVEIIADLKL-----ADIP-NTNRLIARKVFGAGADYVIVHTFV---GRDSVMAVKELGEIIMV 105 (208)
T ss_dssp HHHCTTHHHHHHHHH-CCEEEEEEEE-----CSCH-HHHHHHHHHHHHTTCSEEEEESTT---CHHHHHHHHTTSEEEEE
T ss_pred HhhCHHHHHHHHHcC-CCEEEEEeee-----CchH-HHHHHHHHHHHhcCCCEEEEeccC---CHHHHHHHHHhCCcEEE
Confidence 356677788888763 3444332221 1221 123344445557899988777653 56779999988 66666
Q ss_pred EeccCCCH---------HHHHHHHHhcCccEEEeCC--hHHHHHHHHH
Q 040734 301 TYGRLNNV---------AEAVYMQHLMGIDGVIVDL--VQEITEAVYD 337 (361)
Q Consensus 301 ~w~Tvn~~---------~~~~~~~~~~GVdgI~TD~--p~~~~~~l~~ 337 (361)
+- |-+.. .....+..+.|++|+..-. ++.+.+..+.
T Consensus 106 ~~-t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~~~~~i~~lr~~ 152 (208)
T 2czd_A 106 VE-MSHPGALEFINPLTDRFIEVANEIEPFGVIAPGTRPERIGYIRDR 152 (208)
T ss_dssp CC-CCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCSSTHHHHHHHHH
T ss_pred Ee-cCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCCChHHHHHHHHh
Confidence 66 43321 1122333468999987533 4455544443
No 176
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=35.96 E-value=1e+02 Score=26.41 Aligned_cols=67 Identities=15% Similarity=0.141 Sum_probs=44.9
Q ss_pred HHHHHHHHHhcCCcEEEcCCc-----cccCChHHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhc---CccEEEeCC
Q 040734 260 LEEAVKVCLEGGLQGIVSEVK-----GVFRNPGAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLM---GIDGVIVDL 327 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~-----~~~~~~~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~---GVdgI~TD~ 327 (361)
..+..+.+...|+..+.+... ..-.+.+.++++++. +++|++-|-+++++++.+++ .. |+|||+.-.
T Consensus 148 ~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~i~~~~~ipvia~GGI~~~~d~~~~~-~~~~~Gadgv~vG~ 223 (244)
T 1vzw_A 148 LYETLDRLNKEGCARYVVTDIAKDGTLQGPNLELLKNVCAATDRPVVASGGVSSLDDLRAIA-GLVPAGVEGAIVGK 223 (244)
T ss_dssp HHHHHHHHHHTTCCCEEEEEC-------CCCHHHHHHHHHTCSSCEEEESCCCSHHHHHHHH-TTGGGTEEEEEECH
T ss_pred HHHHHHHHHhCCCCEEEEeccCcccccCCCCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHH-hhccCCCceeeeeH
Confidence 344445556677765543211 001245677777654 78999988899999999986 68 999998653
No 177
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=35.53 E-value=1.7e+02 Score=23.49 Aligned_cols=76 Identities=14% Similarity=0.195 Sum_probs=40.9
Q ss_pred HHHHHHHHHhcCCcEEEcCCccc---cCChHHHHHHHHcC---CEEEEeccCCCHHHHHHHHHhcCccEEEeC-Ch-HHH
Q 040734 260 LEEAVKVCLEGGLQGIVSEVKGV---FRNPGAVTKIKESK---LSLLTYGRLNNVAEAVYMQHLMGIDGVIVD-LV-QEI 331 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~v~~~~~~G---l~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD-~p-~~~ 331 (361)
.++..+.+...+++.+.++.... ..-+++++.+++.| ++|++=|.+ -..+...+ ...|+|+|++. .. ..+
T Consensus 58 ~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG~~-~~~~~~~l-~~~G~d~v~~~~~~~~~~ 135 (161)
T 2yxb_A 58 PEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGGTI-PIPDLEPL-RSLGIREIFLPGTSLGEI 135 (161)
T ss_dssp HHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEECC-CHHHHHHH-HHTTCCEEECTTCCHHHH
T ss_pred HHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeCCC-chhcHHHH-HHCCCcEEECCCCCHHHH
Confidence 34445555555555554433210 11367888888887 455555433 23344444 46999998863 32 344
Q ss_pred HHHHHH
Q 040734 332 TEAVYD 337 (361)
Q Consensus 332 ~~~l~~ 337 (361)
.+++.+
T Consensus 136 ~~~~~~ 141 (161)
T 2yxb_A 136 IEKVRK 141 (161)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 178
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=35.50 E-value=92 Score=25.87 Aligned_cols=55 Identities=16% Similarity=0.128 Sum_probs=34.9
Q ss_pred HHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeC
Q 040734 266 VCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD 326 (361)
Q Consensus 266 ~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD 326 (361)
.+...|++++++..... ..+.++.++ .++.+. . ++.++.++.++. ..|+|.|..+
T Consensus 81 ~a~~~gad~v~l~~~~~--~~~~~~~~~-~~~~~~-v-~~~t~~e~~~~~-~~g~d~i~~~ 135 (215)
T 1xi3_A 81 VALAVDADGVQLGPEDM--PIEVAKEIA-PNLIIG-A-SVYSLEEALEAE-KKGADYLGAG 135 (215)
T ss_dssp HHHHHTCSEEEECTTSC--CHHHHHHHC-TTSEEE-E-EESSHHHHHHHH-HHTCSEEEEE
T ss_pred HHHHcCCCEEEECCccC--CHHHHHHhC-CCCEEE-E-ecCCHHHHHHHH-hcCCCEEEEc
Confidence 45577888888754322 345555554 555443 3 457777776664 5899999864
No 179
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=35.41 E-value=2.5e+02 Score=25.27 Aligned_cols=110 Identities=10% Similarity=0.132 Sum_probs=63.4
Q ss_pred cCCCCEEEEcC--------CHHHHHHHHHHCCCCCEEEEccCCCc--cccccccccHHHHHHHHHhcCCcEEEcCCcc--
Q 040734 214 AENRPIIFSTF--------QPDAAVLIRKLQSTYPVFFLTNGGTE--IFYDVRRNSLEEAVKVCLEGGLQGIVSEVKG-- 281 (361)
Q Consensus 214 ~~~~rv~~~Sf--------~~~~l~~l~~~~p~~~~~~l~~~~~~--~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~-- 281 (361)
+..+|+-+.+- ++..++.+++.. ++|+..+...... .|.+..-....+.+..+++.|++++++..-.
T Consensus 58 gGAdRIELc~~l~~GGlTPS~g~i~~a~~~~-~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~d 136 (287)
T 3iwp_A 58 GGADRIELCSGLSEGGTTPSMGVLQVVKQSV-QIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLYGADGLVFGALTED 136 (287)
T ss_dssp HTCSEEEECBCGGGTCBCCCHHHHHHHHTTC-CSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTT
T ss_pred hCCCEEEECCCCCCCCCCCCHHHHHHHHHhc-CCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEeeeCCC
Confidence 44678888754 788999988764 6999888765432 1111111123455677889999999877411
Q ss_pred ccCCh----HHHHHHHHcCCEEEEe---ccCCCHHH-HHHHHHhcCccEEEeCC
Q 040734 282 VFRNP----GAVTKIKESKLSLLTY---GRLNNVAE-AVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 282 ~~~~~----~~v~~~~~~Gl~v~~w---~Tvn~~~~-~~~~~~~~GVdgI~TD~ 327 (361)
-.++. .+++.++ ++.|... .-+.++.+ +++++ ++|++-|.|--
T Consensus 137 g~iD~~~~~~Li~~a~--~l~vTFHRAFD~~~d~~~Ale~Li-~lGvdrILTSG 187 (287)
T 3iwp_A 137 GHIDKELCMSLMAICR--PLPVTFHRAFDMVHDPMAALETLL-TLGFERVLTSG 187 (287)
T ss_dssp SCBCHHHHHHHHHHHT--TSCEEECGGGGGCSCHHHHHHHHH-HHTCSEEEECT
T ss_pred CCcCHHHHHHHHHHcC--CCcEEEECchhccCCHHHHHHHHH-HcCCCEEECCC
Confidence 01233 3444333 3433322 11224444 45565 68999999843
No 180
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=35.39 E-value=1.5e+02 Score=22.75 Aligned_cols=50 Identities=14% Similarity=0.129 Sum_probs=30.2
Q ss_pred HHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHHHHH
Q 040734 287 GAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEAVYD 337 (361)
Q Consensus 287 ~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~~ 337 (361)
++++.+++. ...|++.+.-.+.....+++ ..|+++++.- .+..+.+.++.
T Consensus 100 ~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~-~~g~~~~l~KP~~~~~l~~~i~~ 153 (157)
T 3hzh_A 100 TCLSNIMEFDKNARVIMISALGKEQLVKDCL-IKGAKTFIVKPLDRAKVLQRVMS 153 (157)
T ss_dssp HHHHHHHHHCTTCCEEEEESCCCHHHHHHHH-HTTCSEEEESSCCHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCcEEEEeccCcHHHHHHHH-HcCCCEEEeCCCCHHHHHHHHHH
Confidence 455555554 36777773334555566665 6999998864 34555555544
No 181
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=35.36 E-value=1.4e+02 Score=22.28 Aligned_cols=77 Identities=12% Similarity=0.065 Sum_probs=43.5
Q ss_pred HHHHHHHHHhcCCcEEEcCCcccc-CChHHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHH
Q 040734 260 LEEAVKVCLEGGLQGIVSEVKGVF-RNPGAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEA 334 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~~~~-~~~~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~ 334 (361)
..++........++.+.++. ..- ..-++++.+++. ++.+++.+.-.+.....+++ ..|++++++- .+..+.+.
T Consensus 37 ~~~a~~~l~~~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~~~~~~~~~~~-~~g~~~~l~kP~~~~~l~~~ 114 (142)
T 2qxy_A 37 EQEAFTFLRREKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAYVDKDLIINSV-KAGAVDYILKPFRLDYLLER 114 (142)
T ss_dssp HHHHHHHHTTSCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHH-HHTCSCEEESSCCHHHHHHH
T ss_pred HHHHHHHHhccCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHH-HCCcceeEeCCCCHHHHHHH
Confidence 34455555555556665554 210 012556666665 47888873334455555665 6899998864 45556555
Q ss_pred HHHh
Q 040734 335 VYDM 338 (361)
Q Consensus 335 l~~~ 338 (361)
++..
T Consensus 115 i~~~ 118 (142)
T 2qxy_A 115 VKKI 118 (142)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 182
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=35.17 E-value=87 Score=23.33 Aligned_cols=51 Identities=10% Similarity=0.013 Sum_probs=33.0
Q ss_pred HHHHHHHHcC--CEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHHHHHh
Q 040734 287 GAVTKIKESK--LSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEAVYDM 338 (361)
Q Consensus 287 ~~v~~~~~~G--l~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~~~ 338 (361)
++++.+++.+ .++.+.+.-.+.....+++ ..|++++++- .+..+...++..
T Consensus 76 ~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~-~~g~~~~l~KP~~~~~L~~~i~~~ 130 (135)
T 3snk_A 76 PGIVEARALWATVPLIAVSDELTSEQTRVLV-RMNASDWLHKPLDGKELLNAVTFH 130 (135)
T ss_dssp TTHHHHHGGGTTCCEEEEESCCCHHHHHHHH-HTTCSEEEESSCCHHHHHHHHHHT
T ss_pred HHHHHHHhhCCCCcEEEEeCCCCHHHHHHHH-HcCcHhhccCCCCHHHHHHHHHHH
Confidence 6677777664 7788873334555566665 6999999874 455555555543
No 183
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=34.91 E-value=1.8e+02 Score=27.05 Aligned_cols=35 Identities=9% Similarity=0.176 Sum_probs=29.0
Q ss_pred HHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 292 IKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 292 ~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
+++.+++|++-|-+.+..++.+++ .+|+|+|+.-.
T Consensus 203 ~~~~~iPVIA~GGI~~~~di~kal-a~GAd~V~vGs 237 (361)
T 3khj_A 203 ASKFGIPIIADGGIRYSGDIGKAL-AVGASSVMIGS 237 (361)
T ss_dssp HHHHTCCEEEESCCCSHHHHHHHH-HHTCSEEEEST
T ss_pred HhhcCCeEEEECCCCCHHHHHHHH-HcCCCEEEECh
Confidence 345689999988899999998887 69999998654
No 184
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=34.62 E-value=1.4e+02 Score=22.09 Aligned_cols=78 Identities=10% Similarity=0.079 Sum_probs=46.0
Q ss_pred HHHHHHHHHhcCCcEEEcCCccccC-ChHHHHHHHHcC--CEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHH
Q 040734 260 LEEAVKVCLEGGLQGIVSEVKGVFR-NPGAVTKIKESK--LSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEA 334 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~~~~~-~~~~v~~~~~~G--l~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~ 334 (361)
..++........++.+.++....-. .-++++.+++.+ ..+.+.+.-.+.+...+++ ..|++++++- .+..+.+.
T Consensus 40 ~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~-~~g~~~~l~kP~~~~~l~~~ 118 (137)
T 3hdg_A 40 GEEGERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIVISAFSEMKYFIKAI-ELGVHLFLPKPIEPGRLMET 118 (137)
T ss_dssp HHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEECCCCCCHHHHHHHH-HHCCSEECCSSCCHHHHHHH
T ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEecCcChHHHHHHH-hCCcceeEcCCCCHHHHHHH
Confidence 3445555555556666666543211 236777777764 6777773233445555665 6999999863 56666666
Q ss_pred HHHh
Q 040734 335 VYDM 338 (361)
Q Consensus 335 l~~~ 338 (361)
+++.
T Consensus 119 i~~~ 122 (137)
T 3hdg_A 119 LEDF 122 (137)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 185
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=34.57 E-value=12 Score=33.36 Aligned_cols=41 Identities=17% Similarity=0.093 Sum_probs=32.2
Q ss_pred hHHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 286 PGAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 286 ~~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
.+.++.+++. +++|.+=+-+++++.+.+++ ..|+|+|+.-.
T Consensus 194 ~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~-~agAD~vVVGS 235 (268)
T 1qop_A 194 HHLIEKLKEYHAAPALQGFGISSPEQVSAAV-RAGAAGAISGS 235 (268)
T ss_dssp HHHHHHHHHTTCCCEEEESSCCSHHHHHHHH-HTTCSEEEECH
T ss_pred HHHHHHHHhccCCcEEEECCCCCHHHHHHHH-HcCCCEEEECh
Confidence 4778888876 57777665799999998865 58999999754
No 186
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=34.50 E-value=1.4e+02 Score=30.70 Aligned_cols=62 Identities=16% Similarity=0.232 Sum_probs=41.0
Q ss_pred CCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccc-------------cCC--------hHHHHHHHHcCC
Q 040734 239 YPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGV-------------FRN--------PGAVTKIKESKL 297 (361)
Q Consensus 239 ~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~-------------~~~--------~~~v~~~~~~Gl 297 (361)
.|+++-.... .+.|+....+.+.++.+++.|+..++++-.|. .++ +.+++++|++|+
T Consensus 329 rPv~~NsW~a--~~~d~~e~~i~~~ad~aa~lG~e~fviDDGWf~~r~~d~~~lGdW~~d~~kFP~Glk~Lad~vh~~Gm 406 (729)
T 4fnq_A 329 RPILINNWEA--TYFDFNEEKLVNIAKTEAELGIELFVLDDGWFGKRDDDRRSLGDWIVNRRKLPNGLDGLAKQVNELGM 406 (729)
T ss_dssp CCCEEECSTT--TTTCCCHHHHHHHHHHHHHHTCCEEEECSCCBTTCCSTTSCTTCCSBCTTTCTTHHHHHHHHHHHTTC
T ss_pred ceeEEccccc--ccccCCHHHHHHHHHHHHhcCccEEEEcceeecCCCCCcccCCcEEEChhhcCccHHHHHHHHHHCCC
Confidence 4555544322 23445445566667777888888887776542 111 479999999999
Q ss_pred EEEEe
Q 040734 298 SLLTY 302 (361)
Q Consensus 298 ~v~~w 302 (361)
++..|
T Consensus 407 kfGLW 411 (729)
T 4fnq_A 407 QFGLW 411 (729)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99999
No 187
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=34.27 E-value=1.4e+02 Score=21.93 Aligned_cols=105 Identities=8% Similarity=-0.040 Sum_probs=57.0
Q ss_pred CEEEEcCCHHHHHHHHHHCC-CCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccC-ChHHHHHHHHc
Q 040734 218 PIIFSTFQPDAAVLIRKLQS-TYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFR-NPGAVTKIKES 295 (361)
Q Consensus 218 rv~~~Sf~~~~l~~l~~~~p-~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~-~~~~v~~~~~~ 295 (361)
+|++..-+......++.... ++.+.. . .+..++........++.+.++...--. .-++++.+++.
T Consensus 6 ~ilivdd~~~~~~~l~~~l~~~~~v~~-~------------~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~ 72 (133)
T 3nhm_A 6 KVLIVENSWTMRETLRLLLSGEFDCTT-A------------ADGASGLQQALAHPPDVLISDVNMDGMDGYALCGHFRSE 72 (133)
T ss_dssp EEEEECSCHHHHHHHHHHHTTTSEEEE-E------------SSHHHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHS
T ss_pred EEEEEcCCHHHHHHHHHHHhCCcEEEE-E------------CCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhC
Confidence 56666666666555554432 222111 1 234555666666667777766553211 23778888875
Q ss_pred ----CCEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHHHHH
Q 040734 296 ----KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEAVYD 337 (361)
Q Consensus 296 ----Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~~ 337 (361)
++++.+. |-....+....+ ..|++++++- .+..+.+.++.
T Consensus 73 ~~~~~~pii~~-s~~~~~~~~~~~-~~g~~~~l~KP~~~~~l~~~i~~ 118 (133)
T 3nhm_A 73 PTLKHIPVIFV-SGYAPRTEGPAD-QPVPDAYLVKPVKPPVLIAQLHA 118 (133)
T ss_dssp TTTTTCCEEEE-ESCCC-----TT-SCCCSEEEESSCCHHHHHHHHHH
T ss_pred CccCCCCEEEE-eCCCcHhHHHHh-hcCCceEEeccCCHHHHHHHHHH
Confidence 6778877 544333334554 6899999863 34555555443
No 188
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=34.12 E-value=2.1e+02 Score=26.48 Aligned_cols=39 Identities=10% Similarity=0.197 Sum_probs=30.5
Q ss_pred ChHHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhcCccEEEe
Q 040734 285 NPGAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLMGIDGVIV 325 (361)
Q Consensus 285 ~~~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T 325 (361)
+-+.++.+++. +++|.+= .+.+.++...+. +.|+|+|+.
T Consensus 205 ~w~~i~~lr~~~~~PvivK-~v~~~e~A~~a~-~~GaD~I~v 244 (352)
T 3sgz_A 205 CWNDLSLLQSITRLPIILK-GILTKEDAELAM-KHNVQGIVV 244 (352)
T ss_dssp CHHHHHHHHHHCCSCEEEE-EECSHHHHHHHH-HTTCSEEEE
T ss_pred CHHHHHHHHHhcCCCEEEE-ecCcHHHHHHHH-HcCCCEEEE
Confidence 34678888776 7888776 567888887775 799999986
No 189
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=33.99 E-value=1.4e+02 Score=22.02 Aligned_cols=50 Identities=6% Similarity=0.098 Sum_probs=30.0
Q ss_pred HHHHHHHH-cCCEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHHHHH
Q 040734 287 GAVTKIKE-SKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEAVYD 337 (361)
Q Consensus 287 ~~v~~~~~-~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~~ 337 (361)
++++.+++ .+.++++.+.-.+......++ ..|++++++- .+..+.+.++.
T Consensus 72 ~~~~~l~~~~~~~ii~ls~~~~~~~~~~~~-~~g~~~~l~kp~~~~~l~~~i~~ 124 (140)
T 3cg0_A 72 ETAARLAAGCNLPIIFITSSQDVETFQRAK-RVNPFGYLAKPVAADTLHRSIEM 124 (140)
T ss_dssp HHHHHHHHHSCCCEEEEECCCCHHHHHHHH-TTCCSEEEEESCCHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCEEEEecCCCHHHHHHHH-hcCCCEEEeCCCCHHHHHHHHHH
Confidence 55666655 367777773334455555665 6999998863 34555555443
No 190
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=33.95 E-value=2.1e+02 Score=24.09 Aligned_cols=144 Identities=11% Similarity=0.043 Sum_probs=78.4
Q ss_pred HHHHHHhCCCCceEEEEEecCCccchhhhHHHHHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCCCEEEEccCC
Q 040734 169 LQEAFQQVDPNVGFNVELKFDDHIVYEQDYLIRVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGG 248 (361)
Q Consensus 169 L~EvL~~~~~~~~l~iEiK~~~~~~~~~~~~~~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~ 248 (361)
..++++.++.++.+.+-.....+.. ... ......+++.+.+.|.. -+.+ -.+..++.+++.. +.|+.-+....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~p~~-~~~--~~~~~~~a~~~~~~G~~-~i~~--~~~~~i~~i~~~~-~~p~i~~~~~~ 79 (234)
T 1yxy_A 7 KEKLMEQLKGGIIVSCQALPGEPLY-SET--GGIMPLMAKAAQEAGAV-GIRA--NSVRDIKEIQAIT-DLPIIGIIKKD 79 (234)
T ss_dssp HHHHHHHHTTSCEEECCCCTTSTTC-CTT--CCSHHHHHHHHHHHTCS-EEEE--ESHHHHHHHHTTC-CSCEEEECBCC
T ss_pred HHHHHHHHhCCEEEEeeCCCCCCCc-CCc--cchHHHHHHHHHHCCCc-Eeec--CCHHHHHHHHHhC-CCCEEeeEcCC
Confidence 3577877765555555554432211 111 00233444555555542 2223 2578888888774 67773222111
Q ss_pred CccccccccccHHHHHHHHHhcCCcEEEcCCcccc-----CChHHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCcc
Q 040734 249 TEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVF-----RNPGAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGID 321 (361)
Q Consensus 249 ~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVd 321 (361)
. +..++-.....+.++.+...|++.+.++..... ...++++.+++. |+.+.+- +.+.++...+. ..|+|
T Consensus 80 ~-~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~--~~t~~ea~~a~-~~Gad 155 (234)
T 1yxy_A 80 Y-PPQEPFITATMTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMAD--ISTFDEGLVAH-QAGID 155 (234)
T ss_dssp C-TTSCCCBSCSHHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEE--CSSHHHHHHHH-HTTCS
T ss_pred C-CccccccCChHHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEe--CCCHHHHHHHH-HcCCC
Confidence 0 000000011123345566889998887654321 114789999988 7776554 67788877775 69999
Q ss_pred EE
Q 040734 322 GV 323 (361)
Q Consensus 322 gI 323 (361)
.|
T Consensus 156 ~i 157 (234)
T 1yxy_A 156 FV 157 (234)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 191
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=33.82 E-value=1.3e+02 Score=25.73 Aligned_cols=78 Identities=17% Similarity=0.191 Sum_probs=50.8
Q ss_pred HHHHHHHHHhcCCcEEEcCC-c--c--ccCChHHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhcCccEEEeC-------
Q 040734 260 LEEAVKVCLEGGLQGIVSEV-K--G--VFRNPGAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD------- 326 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~-~--~--~~~~~~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD------- 326 (361)
..+..+.+...|+..+.+.. . . .-.+.+.++++++. +++|++-|-+++.+++.++. ..|+||++.-
T Consensus 153 ~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~-~~Gadgv~vGsal~~~~ 231 (253)
T 1thf_D 153 LRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAF-LAGADAALAASVFHFRE 231 (253)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTSCSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHH-HTTCSEEEESHHHHTTC
T ss_pred HHHHHHHHHHCCCCEEEEEeccCCCCCCCCCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHH-HcCChHHHHHHHHHcCC
Confidence 34445556677777655431 1 0 01245677777654 78898887899999999987 6999999864
Q ss_pred -ChHHHHHHHHHh
Q 040734 327 -LVQEITEAVYDM 338 (361)
Q Consensus 327 -~p~~~~~~l~~~ 338 (361)
.+..+.+++++.
T Consensus 232 ~~~~~~~~~l~~~ 244 (253)
T 1thf_D 232 IDVRELKEYLKKH 244 (253)
T ss_dssp SCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHc
Confidence 344455555443
No 192
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=33.79 E-value=2.5e+02 Score=25.88 Aligned_cols=41 Identities=7% Similarity=0.091 Sum_probs=21.4
Q ss_pred HHHHHHHH-cCCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 287 GAVTKIKE-SKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 287 ~~v~~~~~-~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
+....+++ .++.|.+-..+.+..++++++..-.+|+|.-|-
T Consensus 231 ~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~ 272 (384)
T 2pgw_A 231 PAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAADMICIGP 272 (384)
T ss_dssp HHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECH
T ss_pred HHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcc
Confidence 33444433 356666554555666666665323366666553
No 193
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=33.76 E-value=1.4e+02 Score=22.07 Aligned_cols=76 Identities=5% Similarity=0.021 Sum_probs=43.7
Q ss_pred HHHHHHHHHhcCCcEEEcCCccccC-ChHHHHHHHH----cCCEEEEeccCCCHHH-HH-HHHHhcCccEEEeC--ChHH
Q 040734 260 LEEAVKVCLEGGLQGIVSEVKGVFR-NPGAVTKIKE----SKLSLLTYGRLNNVAE-AV-YMQHLMGIDGVIVD--LVQE 330 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~~~~~-~~~~v~~~~~----~Gl~v~~w~Tvn~~~~-~~-~~~~~~GVdgI~TD--~p~~ 330 (361)
..+++.......++.+.++...--. .-++++.+++ ..+++++. |-....+ .. .++ ..|+++++.- .+..
T Consensus 39 ~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~-s~~~~~~~~~~~~~-~~g~~~~l~kP~~~~~ 116 (140)
T 3grc_A 39 AAQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVV-SANAREGELEFNSQ-PLAVSTWLEKPIDENL 116 (140)
T ss_dssp HHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEE-CTTHHHHHHHHCCT-TTCCCEEECSSCCHHH
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEE-ecCCChHHHHHHhh-hcCCCEEEeCCCCHHH
Confidence 4455555556666666666543211 2367777776 36788888 5544333 32 333 5899999863 4555
Q ss_pred HHHHHHH
Q 040734 331 ITEAVYD 337 (361)
Q Consensus 331 ~~~~l~~ 337 (361)
+...++.
T Consensus 117 l~~~i~~ 123 (140)
T 3grc_A 117 LILSLHR 123 (140)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555543
No 194
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=33.06 E-value=93 Score=29.24 Aligned_cols=60 Identities=20% Similarity=0.197 Sum_probs=41.8
Q ss_pred HHHHHhcCCcEEEcCCcccc--CChHHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEe
Q 040734 264 VKVCLEGGLQGIVSEVKGVF--RNPGAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIV 325 (361)
Q Consensus 264 ~~~~~~~~~~~i~~~~~~~~--~~~~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T 325 (361)
...+...+++.+.++...-. ...+.++.+++. ++.|.+- .+.+.++++.+. +.|+|+|..
T Consensus 158 a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~-~v~~~~~a~~a~-~~Gad~I~v 221 (404)
T 1eep_A 158 VEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAG-NIVTKEAALDLI-SVGADCLKV 221 (404)
T ss_dssp HHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEE-EECSHHHHHHHH-TTTCSEEEE
T ss_pred HHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEc-CCCcHHHHHHHH-hcCCCEEEE
Confidence 34455678888775322110 123667888888 8999885 678888887775 799999987
No 195
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=32.71 E-value=1.6e+02 Score=25.51 Aligned_cols=67 Identities=15% Similarity=0.160 Sum_probs=46.2
Q ss_pred HHHHHHHHHhcCCcEEEcCCc---c--ccCChHHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 260 LEEAVKVCLEGGLQGIVSEVK---G--VFRNPGAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~---~--~~~~~~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
..+..+.+...|+..+.+... . .-.+.++++.+++. +++|++=|-+.+++++.+++ ..|+|||+.-.
T Consensus 158 ~~e~~~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~~ipvia~GGI~~~ed~~~~~-~~Gadgv~vgs 230 (266)
T 2w6r_A 158 LRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAF-LAGADAALAAS 230 (266)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTTCSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHH-HHTCSEEEEST
T ss_pred HHHHHHHHHHcCCCEEEEEeecCCCCcCCCCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHH-HcCCHHHHccH
Confidence 344445566778776654211 0 11235777777664 78999887899999999987 58999999765
No 196
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=32.69 E-value=1.2e+02 Score=29.22 Aligned_cols=68 Identities=12% Similarity=0.121 Sum_probs=49.7
Q ss_pred HHHHHHHHHhcCCcEEEcCCccccC---------------------ChHHHHHHHHc---CCEEEEeccCCCHHHHHHHH
Q 040734 260 LEEAVKVCLEGGLQGIVSEVKGVFR---------------------NPGAVTKIKES---KLSLLTYGRLNNVAEAVYMQ 315 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~~~~~---------------------~~~~v~~~~~~---Gl~v~~w~Tvn~~~~~~~~~ 315 (361)
+.+..+.+.+.|+++|++....... .-+++..++++ .+.|+.=|-|.+.+++.+++
T Consensus 313 ~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l 392 (443)
T 1tv5_A 313 KKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKI 392 (443)
T ss_dssp HHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHH
Confidence 4455677778899998776543210 12567777766 68998887899999999997
Q ss_pred HhcCccEEEeCCh
Q 040734 316 HLMGIDGVIVDLV 328 (361)
Q Consensus 316 ~~~GVdgI~TD~p 328 (361)
..|+|+|+.-.+
T Consensus 393 -~aGAd~Vqigra 404 (443)
T 1tv5_A 393 -EAGASVCQLYSC 404 (443)
T ss_dssp -HTTEEEEEESHH
T ss_pred -HcCCCEEEEcHH
Confidence 599999986543
No 197
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=32.44 E-value=1.5e+02 Score=21.99 Aligned_cols=75 Identities=5% Similarity=-0.040 Sum_probs=39.7
Q ss_pred HHHHHHHHHhcCCcEEEcCCccccC-ChHHHHHHHH----cCCEEEEeccCC-CHHHHHHHHHhcCccEEEeC--ChHHH
Q 040734 260 LEEAVKVCLEGGLQGIVSEVKGVFR-NPGAVTKIKE----SKLSLLTYGRLN-NVAEAVYMQHLMGIDGVIVD--LVQEI 331 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~~~~~-~~~~v~~~~~----~Gl~v~~w~Tvn-~~~~~~~~~~~~GVdgI~TD--~p~~~ 331 (361)
..++........++.+.++....-. .-++++.+++ ....+++. +-. +......++ ..|++++++- .+..+
T Consensus 40 ~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~-s~~~~~~~~~~~~-~~g~~~~l~kp~~~~~l 117 (142)
T 3cg4_A 40 GGQCIDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIVML-TAKNAPDAKMIGL-QEYVVDYITKPFDNEDL 117 (142)
T ss_dssp HHHHHHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEEEEE-ECTTCCCCSSTTG-GGGEEEEEESSCCHHHH
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCEEEE-ECCCCHHHHHHHH-hcCccEEEeCCCCHHHH
Confidence 3444455555555555555432111 2366777776 34677777 433 333333444 5899998864 34445
Q ss_pred HHHHH
Q 040734 332 TEAVY 336 (361)
Q Consensus 332 ~~~l~ 336 (361)
.+.++
T Consensus 118 ~~~i~ 122 (142)
T 3cg4_A 118 IEKTT 122 (142)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 198
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=32.32 E-value=1.8e+02 Score=24.36 Aligned_cols=93 Identities=15% Similarity=0.032 Sum_probs=52.0
Q ss_pred EcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccC-ChHHHHHHHHcCCEEE
Q 040734 222 STFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFR-NPGAVTKIKESKLSLL 300 (361)
Q Consensus 222 ~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~-~~~~v~~~~~~Gl~v~ 300 (361)
.+|.+..++.+++..|+.++.+-.... |. .....+.+.+.|++.+.++...-.- -..+++.+++.|..+.
T Consensus 40 ~~~G~~~i~~l~~~~p~~~v~lD~kl~-----di----p~t~~~~~~~~Gad~itvh~~~g~~~l~~~~~~~~~~g~~~~ 110 (216)
T 1q6o_A 40 VGEGVRAVRDLKALYPHKIVLADAKIA-----DA----GKILSRMCFEANADWVTVICCADINTAKGALDVAKEFNGDVQ 110 (216)
T ss_dssp HHHCTHHHHHHHHHCTTSEEEEEEEEC-----SC----HHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHTTCEEE
T ss_pred HHhCHHHHHHHHHhCCCCeEEEEEEec-----cc----HHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCce
Confidence 356777899999988877765433221 11 1111234557899988776543111 1366777888899875
Q ss_pred Ee-c-cCCCHHHHHHHHHhcCccEEEe
Q 040734 301 TY-G-RLNNVAEAVYMQHLMGIDGVIV 325 (361)
Q Consensus 301 ~w-~-Tvn~~~~~~~~~~~~GVdgI~T 325 (361)
+- - .++ ......+. ..|++-++.
T Consensus 111 ~~ll~~~t-~~~~~~l~-~~~~~~~vl 135 (216)
T 1q6o_A 111 IELTGYWT-WEQAQQWR-DAGIGQVVY 135 (216)
T ss_dssp EEECSCCC-HHHHHHHH-HTTCCEEEE
T ss_pred eeeeeCCC-hhhHHHHH-hcCcHHHHH
Confidence 31 0 122 33444443 456554444
No 199
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=32.27 E-value=2.3e+02 Score=24.03 Aligned_cols=96 Identities=13% Similarity=-0.026 Sum_probs=54.6
Q ss_pred EcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccc-cCChHHHHHHHHcC---C
Q 040734 222 STFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGV-FRNPGAVTKIKESK---L 297 (361)
Q Consensus 222 ~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~-~~~~~~v~~~~~~G---l 297 (361)
.+|.+..++.+++..|+.++.+-... .|.. +... ..+.+.|++.+.++...- -.-.+.++.+++.| .
T Consensus 42 ~~~G~~~v~~l~~~~p~~~iflDlKl-----~Dip-~t~~---~~~~~~Gad~vtVH~~~g~~~l~~a~~~~~~~g~~~~ 112 (221)
T 3exr_A 42 LQVGSELVEVLRSLFPDKIIVADTKC-----ADAG-GTVA---KNNAVRGADWMTCICSATIPTMKAARKAIEDINPDKG 112 (221)
T ss_dssp HHHCTHHHHHHHHHCTTSEEEEEEEE-----CSCH-HHHH---HHHHTTTCSEEEEETTSCHHHHHHHHHHHHHHCTTTC
T ss_pred HhcCHHHHHHHHHhCCCCcEEEEEEe-----eccH-HHHH---HHHHHcCCCEEEEeccCCHHHHHHHHHHHHhcCCCcc
Confidence 46778889999998888777553221 1221 1122 335678999877765421 01234566677777 4
Q ss_pred EEEEec-cCCCHHHHHHHHHhcCccEEEeCC
Q 040734 298 SLLTYG-RLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 298 ~v~~w~-Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
.+.+-- |.-+.+.+..++ ..|++-++...
T Consensus 113 ~~~Vt~lts~~~~~~~~~~-~~~~~~~v~~~ 142 (221)
T 3exr_A 113 EIQVELYGDWTYDQAQQWL-DAGISQAIYHQ 142 (221)
T ss_dssp EEEEECCSSCCHHHHHHHH-HTTCCEEEEEC
T ss_pred eEEEEEcCCCCHHHHHHHH-cCCHHHHHHHH
Confidence 554430 322455665664 56877666543
No 200
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=32.24 E-value=82 Score=27.10 Aligned_cols=51 Identities=22% Similarity=0.283 Sum_probs=35.4
Q ss_pred HHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhcCccEEEeCC-----hHHHHHHHHHh
Q 040734 287 GAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL-----VQEITEAVYDM 338 (361)
Q Consensus 287 ~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~-----p~~~~~~l~~~ 338 (361)
+.++.+++. ++++.+-+-+++++++..++ ..|+|+|+... |..+.++++.+
T Consensus 64 ~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~-~~Gad~V~lg~~~l~~p~~~~~~~~~~ 120 (253)
T 1thf_D 64 ELVEKVAEQIDIPFTVGGGIHDFETASELI-LRGADKVSINTAAVENPSLITQIAQTF 120 (253)
T ss_dssp HHHHHHHTTCCSCEEEESSCCSHHHHHHHH-HTTCSEEEESHHHHHCTHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEeCCCCCHHHHHHHH-HcCCCEEEEChHHHhChHHHHHHHHHc
Confidence 555666543 67887776788888888876 58999988644 45566666554
No 201
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=32.12 E-value=51 Score=29.93 Aligned_cols=86 Identities=16% Similarity=0.076 Sum_probs=57.3
Q ss_pred CHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHH--cCCEEEEe
Q 040734 225 QPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKE--SKLSLLTY 302 (361)
Q Consensus 225 ~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~--~Gl~v~~w 302 (361)
+++.++.+++.. .+|+....... .+.+ .+.+...|++.+..... ...+++++.+++ .|+.+.+
T Consensus 66 ~~~~i~~i~~~v-~iPvl~k~~i~----------~ide-~qil~aaGAD~Id~s~~--~~~~~li~~i~~~~~g~~vvv- 130 (297)
T 4adt_A 66 DPLKIEEIRKCI-SINVLAKVRIG----------HFVE-AQILEELKVDMLDESEV--LTMADEYNHINKHKFKTPFVC- 130 (297)
T ss_dssp CHHHHHHHHTTC-CSEEEEEEETT----------CHHH-HHHHHHTTCSEEEEETT--SCCSCSSCCCCGGGCSSCEEE-
T ss_pred CHHHHHHHHHhc-CCCEEEeccCC----------cHHH-HHHHHHcCCCEEEcCCC--CCHHHHHHHHHhcCCCCeEEE-
Confidence 688999998875 78886543221 1222 33445789999832211 235678888888 4666655
Q ss_pred ccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 303 GRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 303 ~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
.+.+.++..+.+ ..|+|.|.++.
T Consensus 131 -~v~~~~Ea~~a~-~~Gad~I~v~g 153 (297)
T 4adt_A 131 -GCTNLGEALRRI-SEGASMIRTKG 153 (297)
T ss_dssp -EESSHHHHHHHH-HHTCSEEEECC
T ss_pred -EeCCHHHHHHHH-hCCCCEEEECC
Confidence 478888888876 68999999873
No 202
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=32.09 E-value=1e+02 Score=29.95 Aligned_cols=91 Identities=13% Similarity=-0.006 Sum_probs=57.6
Q ss_pred HHHHHHHHHHCCC-CCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcc--------c----cCC----hHH
Q 040734 226 PDAAVLIRKLQST-YPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKG--------V----FRN----PGA 288 (361)
Q Consensus 226 ~~~l~~l~~~~p~-~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~--------~----~~~----~~~ 288 (361)
.+.++.+++..|+ .++..-.- .+.+ ....+...|++++.+.... + ..+ ++.
T Consensus 271 ~~~i~~lk~~~~~~~~Vi~G~V-----------~t~~-~a~~l~~aGad~I~Vg~~~g~~~~~r~~~~~g~p~~~~l~~v 338 (503)
T 1me8_A 271 KITIGWIREKYGDKVKVGAGNI-----------VDGE-GFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDV 338 (503)
T ss_dssp HHHHHHHHHHHGGGSCEEEEEE-----------CSHH-HHHHHHHHTCSEEEECSSCSTTCCSTTTTCCCCCHHHHHHHH
T ss_pred hhHHHHHHHhCCCCceEeeccc-----------cCHH-HHHHHHHhCCCeEEecccCCcCcccccccCCCCchHHHHHHH
Confidence 4567788888777 77653211 1122 2344556788776442210 0 001 144
Q ss_pred HHHHHHc------CCEEEEeccCCCHHHHHHHHHhcCccEEEeCChH
Q 040734 289 VTKIKES------KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQ 329 (361)
Q Consensus 289 v~~~~~~------Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~ 329 (361)
.+.+++. ++.|++-|-+.+..++.+++ ++|+|+|+.-.+-
T Consensus 339 ~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAl-alGA~~V~iG~~~ 384 (503)
T 1me8_A 339 VAERNKYFEETGIYIPVCSDGGIVYDYHMTLAL-AMGADFIMLGRYF 384 (503)
T ss_dssp HHHHHHHHHHHSEECCEEEESCCCSHHHHHHHH-HTTCSEEEESHHH
T ss_pred HHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHH-HcCCCEEEECchh
Confidence 4444544 79999998899999999997 6999999988754
No 203
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=31.92 E-value=2.1e+02 Score=23.38 Aligned_cols=51 Identities=12% Similarity=0.224 Sum_probs=34.0
Q ss_pred HHHHHHHH------cCCEEEEeccCC--CHHHHHHHHHhcCccEEEeCChHHHHHHHHHhc
Q 040734 287 GAVTKIKE------SKLSLLTYGRLN--NVAEAVYMQHLMGIDGVIVDLVQEITEAVYDMI 339 (361)
Q Consensus 287 ~~v~~~~~------~Gl~v~~w~Tvn--~~~~~~~~~~~~GVdgI~TD~p~~~~~~l~~~~ 339 (361)
++++.+++ ..++|++. |-. +.....+++ ..|++++++=-...+.+.++...
T Consensus 136 el~~~lr~~~~~~~~~~piI~l-s~~~~~~~~~~~~~-~~Ga~~~l~KP~~~L~~~i~~~l 194 (206)
T 3mm4_A 136 EATREIRKVEKSYGVRTPIIAV-SGHDPGSEEARETI-QAGMDAFLDKSLNQLANVIREIE 194 (206)
T ss_dssp HHHHHHHHHHHTTTCCCCEEEE-ESSCCCHHHHHHHH-HHTCSEEEETTCTTHHHHHHHHC
T ss_pred HHHHHHHhhhhhcCCCCcEEEE-ECCCCcHHHHHHHH-hCCCCEEEcCcHHHHHHHHHHHH
Confidence 66677766 45778887 544 445566665 69999999865556666666543
No 204
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=31.85 E-value=1.5e+02 Score=25.21 Aligned_cols=67 Identities=24% Similarity=0.212 Sum_probs=45.4
Q ss_pred HHHHHHHHHhcCCcEEEcCCcc-----ccCChHHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhc-----C-ccEEEeCC
Q 040734 260 LEEAVKVCLEGGLQGIVSEVKG-----VFRNPGAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLM-----G-IDGVIVDL 327 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~-----G-VdgI~TD~ 327 (361)
..+..+.+...|+..+.+.... .-.+-++++++++. +++|++-|-+.+++++.+++ .. | +|||+.-.
T Consensus 146 ~~e~~~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~~iPvia~GGI~~~~d~~~~~-~~~~~~~G~adgv~vgs 224 (241)
T 1qo2_A 146 PVSLLKRLKEYGLEEIVHTEIEKDGTLQEHDFSLTKKIAIEAEVKVLAAGGISSENSLKTAQ-KVHTETNGLLKGVIVGR 224 (241)
T ss_dssp HHHHHHHHHTTTCCEEEEEETTHHHHTCCCCHHHHHHHHHHHTCEEEEESSCCSHHHHHHHH-HHHHHTTTSEEEEEECH
T ss_pred HHHHHHHHHhCCCCEEEEEeecccccCCcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHH-hcccccCCeEeEEEeeH
Confidence 4454555667777755543211 01245677777654 79999988899999999986 57 9 99998643
No 205
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*
Probab=31.75 E-value=1.3e+02 Score=29.37 Aligned_cols=42 Identities=10% Similarity=0.105 Sum_probs=30.7
Q ss_pred hHHHHHHHHcCCEEEEeccC------------CC-HHHHHHHHHhcCccEEEeCCh
Q 040734 286 PGAVTKIKESKLSLLTYGRL------------NN-VAEAVYMQHLMGIDGVIVDLV 328 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tv------------n~-~~~~~~~~~~~GVdgI~TD~p 328 (361)
+.+++++|++|+++..|... +. ..+++.+ .++|||.|=-|..
T Consensus 97 k~Lad~ih~~GlKfGIw~~pG~~tC~~~pGsl~~~~~da~~f-a~WGVDylK~D~c 151 (479)
T 3lrk_A 97 GHVADHLHNNSFLFGMYSSAGEYTCAGYPGSLGREEEDAQFF-ANNRVDYLKYDNC 151 (479)
T ss_dssp HHHHHHHHHTTCEEEEEEESSSBCTTSSBCCTTCHHHHHHHH-HHTTCCEEEEECT
T ss_pred HHHHHHHHHCCCeeEEEecCccccccCCCchhHHHHHHHHHH-HHhCCcEEEEccC
Confidence 58999999999999999322 12 2344445 4799999998864
No 206
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=31.45 E-value=2.4e+02 Score=26.51 Aligned_cols=113 Identities=12% Similarity=0.152 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCc
Q 040734 201 RVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVK 280 (361)
Q Consensus 201 ~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~ 280 (361)
.+...+.+.+.+.+ .++++.-.|++.++.+++. ++++.+-. .. -.+.+.-+.-.++..+.+...
T Consensus 14 r~G~~va~~L~~~g--~~vvvId~d~~~v~~~~~~--g~~vi~GD---------at---~~~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 14 RFGQITGRLLLSSG--VKMVVLDHDPDHIETLRKF--GMKVFYGD---------AT---RMDLLESAGAAKAEVLINAID 77 (413)
T ss_dssp HHHHHHHHHHHHTT--CCEEEEECCHHHHHHHHHT--TCCCEESC---------TT---CHHHHHHTTTTTCSEEEECCS
T ss_pred HHHHHHHHHHHHCC--CCEEEEECCHHHHHHHHhC--CCeEEEcC---------CC---CHHHHHhcCCCccCEEEECCC
Confidence 46677788887765 4688888999999988864 44443321 11 011122221223455554433
Q ss_pred cccCChHHHHHHHHcCC--EEEEeccCCCHHHHHHHHHhcCccEEEeCChHHHH
Q 040734 281 GVFRNPGAVTKIKESKL--SLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEIT 332 (361)
Q Consensus 281 ~~~~~~~~v~~~~~~Gl--~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~ 332 (361)
....+...+..+++.+- +|++- +++......+. .+|+|-|+.-.-....
T Consensus 78 ~~~~n~~i~~~ar~~~p~~~Iiar--a~~~~~~~~L~-~~Gad~Vi~~~~~~a~ 128 (413)
T 3l9w_A 78 DPQTNLQLTEMVKEHFPHLQIIAR--ARDVDHYIRLR-QAGVEKPERETFEGAL 128 (413)
T ss_dssp SHHHHHHHHHHHHHHCTTCEEEEE--ESSHHHHHHHH-HTTCSSCEETTHHHHH
T ss_pred ChHHHHHHHHHHHHhCCCCeEEEE--ECCHHHHHHHH-HCCCCEEECccHHHHH
Confidence 22234566777888774 45555 56777777775 6999998875544433
No 207
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=31.41 E-value=1.4e+02 Score=23.58 Aligned_cols=54 Identities=11% Similarity=0.135 Sum_probs=32.0
Q ss_pred hHHHHHHHHcCCEEEEeccCCCH---------------HHHHHHHHhcC--ccEEEe------C-------ChHHHHHHH
Q 040734 286 PGAVTKIKESKLSLLTYGRLNNV---------------AEAVYMQHLMG--IDGVIV------D-------LVQEITEAV 335 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tvn~~---------------~~~~~~~~~~G--VdgI~T------D-------~p~~~~~~l 335 (361)
.++++.++++|+++.+- |-+.. ..+...+..+| ++.++. + .|..+..++
T Consensus 33 ~~~l~~L~~~g~~~~i~-Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~ 111 (179)
T 3l8h_A 33 LQAIARLTQADWTVVLA-TNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCPHGPDDGCACRKPLPGMYRDIA 111 (179)
T ss_dssp HHHHHHHHHTTCEEEEE-EECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEECCCTTSCCSSSTTSSHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEE-ECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEcCCCCCCCCCCCCCCHHHHHHHH
Confidence 47778888888888777 53332 23334444577 787772 2 245556666
Q ss_pred HHhcC
Q 040734 336 YDMIK 340 (361)
Q Consensus 336 ~~~~~ 340 (361)
+++..
T Consensus 112 ~~~~~ 116 (179)
T 3l8h_A 112 RRYDV 116 (179)
T ss_dssp HHHTC
T ss_pred HHcCC
Confidence 66543
No 208
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=31.02 E-value=1.5e+02 Score=21.52 Aligned_cols=75 Identities=13% Similarity=0.093 Sum_probs=41.8
Q ss_pred HHHHHHHHhcCCcEEEcCCccccC-ChHHHHHHHHc----CCEEEEeccC-CCHHHHHHHHHhcCccEEEeC--ChHHHH
Q 040734 261 EEAVKVCLEGGLQGIVSEVKGVFR-NPGAVTKIKES----KLSLLTYGRL-NNVAEAVYMQHLMGIDGVIVD--LVQEIT 332 (361)
Q Consensus 261 ~~~~~~~~~~~~~~i~~~~~~~~~-~~~~v~~~~~~----Gl~v~~w~Tv-n~~~~~~~~~~~~GVdgI~TD--~p~~~~ 332 (361)
.++++......++.+.++...--. .-++++.+++. ++++.+. |- .+.....+.+ ..|++++++= .+..+.
T Consensus 36 ~~al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~-s~~~~~~~~~~~~-~~Ga~~~l~KP~~~~~L~ 113 (122)
T 3gl9_A 36 QIALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVL-TAKGGEEDESLAL-SLGARKVMRKPFSPSQFI 113 (122)
T ss_dssp HHHHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEE-ESCCSHHHHHHHH-HTTCSEEEESSCCHHHHH
T ss_pred HHHHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEE-ecCCchHHHHHHH-hcChhhhccCCCCHHHHH
Confidence 344444444445555555432111 13667777654 4677777 44 4455555665 6999999873 455555
Q ss_pred HHHHH
Q 040734 333 EAVYD 337 (361)
Q Consensus 333 ~~l~~ 337 (361)
+.+++
T Consensus 114 ~~i~~ 118 (122)
T 3gl9_A 114 EEVKH 118 (122)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55544
No 209
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=30.99 E-value=1.6e+02 Score=23.80 Aligned_cols=39 Identities=13% Similarity=0.082 Sum_probs=22.0
Q ss_pred hHHHHHHHHcCCEEEEeccCCCH---HHHHHHHHhcCc----cEEEe
Q 040734 286 PGAVTKIKESKLSLLTYGRLNNV---AEAVYMQHLMGI----DGVIV 325 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tvn~~---~~~~~~~~~~GV----dgI~T 325 (361)
.++++.++++|+++++- |-+.. ..+...+..+|+ |.|++
T Consensus 40 ~~~L~~L~~~g~~~~i~-Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~ 85 (189)
T 3ib6_A 40 KETLEKVKQLGFKQAIL-SNTATSDTEVIKRVLTNFGIIDYFDFIYA 85 (189)
T ss_dssp HHHHHHHHHTTCEEEEE-ECCSSCCHHHHHHHHHHTTCGGGEEEEEE
T ss_pred HHHHHHHHHCCCEEEEE-ECCCccchHHHHHHHHhcCchhheEEEEE
Confidence 36677777777777776 43322 344444445563 45554
No 210
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=30.89 E-value=1.5e+02 Score=27.70 Aligned_cols=65 Identities=8% Similarity=0.084 Sum_probs=41.9
Q ss_pred HHHHHHHHHhcCCcEEEcCCccc--c------CCh----HHHHHHHHc-CCEEEEeccC---CCHHHHHHHHHhcCccEE
Q 040734 260 LEEAVKVCLEGGLQGIVSEVKGV--F------RNP----GAVTKIKES-KLSLLTYGRL---NNVAEAVYMQHLMGIDGV 323 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~~~--~------~~~----~~v~~~~~~-Gl~v~~w~Tv---n~~~~~~~~~~~~GVdgI 323 (361)
.++..+.....+++++.++.+.. . .+- +.|+.+++. +++|.+= .+ .+++++..+. +.|+|+|
T Consensus 157 ~e~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK-~vg~g~s~e~A~~l~-~aGad~I 234 (365)
T 3sr7_A 157 YQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKLQLPFILK-EVGFGMDVKTIQTAI-DLGVKTV 234 (365)
T ss_dssp HHHHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEE-ECSSCCCHHHHHHHH-HHTCCEE
T ss_pred HHHHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEE-ECCCCCCHHHHHHHH-HcCCCEE
Confidence 44555666666776665544321 0 111 467777665 7888876 45 6788887776 6999999
Q ss_pred EeC
Q 040734 324 IVD 326 (361)
Q Consensus 324 ~TD 326 (361)
...
T Consensus 235 ~V~ 237 (365)
T 3sr7_A 235 DIS 237 (365)
T ss_dssp ECC
T ss_pred EEe
Confidence 864
No 211
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=30.83 E-value=1.2e+02 Score=27.65 Aligned_cols=63 Identities=16% Similarity=0.184 Sum_probs=43.3
Q ss_pred HHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEeCC--hHHHHHHHHHhcCCcccccccCcccc
Q 040734 287 GAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL--VQEITEAVYDMIKPAKVVEKEDNKSL 353 (361)
Q Consensus 287 ~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~--p~~~~~~l~~~~~~~~~~~~~~~~~~ 353 (361)
+.|+.+++. .+++-+= +++.++..+.+ ..|+|.|+-|. |+.++++++... +....+.+++..+
T Consensus 196 ~Av~~ar~~~p~~kIeVE--v~tl~e~~eAl-~aGaDiImLDn~s~~~l~~av~~~~-~~v~leaSGGIt~ 262 (300)
T 3l0g_A 196 LAIQRLRKNLKNEYIAIE--CDNISQVEESL-SNNVDMILLDNMSISEIKKAVDIVN-GKSVLEVSGCVNI 262 (300)
T ss_dssp HHHHHHHHHSSSCCEEEE--ESSHHHHHHHH-HTTCSEEEEESCCHHHHHHHHHHHT-TSSEEEEESSCCT
T ss_pred HHHHHHHHhCCCCCEEEE--ECCHHHHHHHH-HcCCCEEEECCCCHHHHHHHHHhhc-CceEEEEECCCCH
Confidence 566777765 3556554 67888888887 69999999887 566666766543 3455666666544
No 212
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=30.81 E-value=1.7e+02 Score=22.10 Aligned_cols=111 Identities=15% Similarity=0.094 Sum_probs=60.9
Q ss_pred CEEEEcCCHHHHHHHHHHCCC-CCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccC-ChHHHHHHHHc
Q 040734 218 PIIFSTFQPDAAVLIRKLQST-YPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFR-NPGAVTKIKES 295 (361)
Q Consensus 218 rv~~~Sf~~~~l~~l~~~~p~-~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~-~~~~v~~~~~~ 295 (361)
+|++..-+......++..... ........ ..+..++........++.+.++....-. .-++++.+++.
T Consensus 7 ~ILivdd~~~~~~~l~~~L~~~~~~~v~~~----------~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~ 76 (153)
T 3cz5_A 7 RIMLVDDHPIVREGYRRLIERRPGYAVVAE----------AADAGEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQW 76 (153)
T ss_dssp EEEEECSCHHHHHHHHHHHTTSTTEEEEEE----------ESSHHHHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHH
T ss_pred EEEEECCcHHHHHHHHHHHhhCCCcEEEEE----------eCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHh
Confidence 466666666666666655433 22211100 1134555566666666666666543211 13667777765
Q ss_pred --CCEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHHHHHhc
Q 040734 296 --KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEAVYDMI 339 (361)
Q Consensus 296 --Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~~~~ 339 (361)
+..+.+.+.-.+......++ ..|++++++- .+..+.+.++...
T Consensus 77 ~~~~~ii~ls~~~~~~~~~~~~-~~g~~~~l~kp~~~~~L~~~i~~~~ 123 (153)
T 3cz5_A 77 DGAARILIFTMHQGSAFALKAF-EAGASGYVTKSSDPAELVQAIEAIL 123 (153)
T ss_dssp CTTCCEEEEESCCSHHHHHHHH-HTTCSEEEETTSCTTHHHHHHHHHT
T ss_pred CCCCeEEEEECCCCHHHHHHHH-HCCCcEEEecCCCHHHHHHHHHHHH
Confidence 46777773233445555565 5899988864 4556666665543
No 213
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=30.45 E-value=1.2e+02 Score=29.19 Aligned_cols=64 Identities=20% Similarity=0.176 Sum_probs=44.5
Q ss_pred HHHHHHHHHhcCCcEEEcCCccc--cCChHHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEe
Q 040734 260 LEEAVKVCLEGGLQGIVSEVKGV--FRNPGAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIV 325 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~~~--~~~~~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T 325 (361)
..+.+..+...|++.+.++...- ....+.++.+++. ++.|.+= .+.+.+++..+. +.|+|+|..
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g-~~~t~e~a~~l~-~~G~d~I~v 305 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAG-NVATPEGTEALI-KAGADAVKV 305 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEE-EECSHHHHHHHH-HTTCSEEEE
T ss_pred HHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeC-CcCCHHHHHHHH-HcCCCEEEE
Confidence 34455566678888887654321 1134778888887 7887654 577888888886 699999986
No 214
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=30.20 E-value=1.5e+02 Score=25.84 Aligned_cols=66 Identities=20% Similarity=0.169 Sum_probs=44.2
Q ss_pred HHHHHHHHH----hcCCcEEEcCCccccCChHHHHHHHHcC--CEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 260 LEEAVKVCL----EGGLQGIVSEVKGVFRNPGAVTKIKESK--LSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 260 l~~~~~~~~----~~~~~~i~~~~~~~~~~~~~v~~~~~~G--l~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
.+.+..++. -++...+-+.+.....++++++++++.. +++.+=+-+.++++++++. . |+|+|++-.
T Consensus 144 ~e~iaa~A~~a~~~~g~~~vY~e~sG~~g~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~-~-gAD~VVVGS 215 (235)
T 3w01_A 144 TEDLEAYAQMVNHMYRLPVMYIEYSGIYGDVSKVQAVSEHLTETQLFYGGGISSEQQATEMA-A-IADTIIVGD 215 (235)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEECTTSCCCHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHH-T-TSSEEEECT
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecCCCcCCHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHH-c-CCCEEEECC
Confidence 555556653 2233333222233345789999999874 6777655799999998875 4 999999765
No 215
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=29.92 E-value=3.1e+02 Score=25.05 Aligned_cols=92 Identities=12% Similarity=0.055 Sum_probs=47.4
Q ss_pred CHHHHHHHHHHC-CCCCEEEEccCCCccccccccccHHHHHHHHH---hcCCcEEEcCCccccCChHHHHHHHH-cCCEE
Q 040734 225 QPDAAVLIRKLQ-STYPVFFLTNGGTEIFYDVRRNSLEEAVKVCL---EGGLQGIVSEVKGVFRNPGAVTKIKE-SKLSL 299 (361)
Q Consensus 225 ~~~~l~~l~~~~-p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~---~~~~~~i~~~~~~~~~~~~~v~~~~~-~Gl~v 299 (361)
+.+.++.+|+.. |++++.+-.+.+. +.++++++++ .+++..+--+... .+-+....+++ .++.|
T Consensus 177 ~~e~v~avr~a~G~d~~l~vDan~~~---------~~~~a~~~~~~l~~~~i~~iEqP~~~--~d~~~~~~l~~~~~iPI 245 (371)
T 2ovl_A 177 DVDRVSALREHLGDSFPLMVDANMKW---------TVDGAIRAARALAPFDLHWIEEPTIP--DDLVGNARIVRESGHTI 245 (371)
T ss_dssp HHHHHHHHHHHHCTTSCEEEECTTCS---------CHHHHHHHHHHHGGGCCSEEECCSCT--TCHHHHHHHHHHHCSCE
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCC---------CHHHHHHHHHHHHhcCCCEEECCCCc--ccHHHHHHHHhhCCCCE
Confidence 345666666654 5666654433221 2344444443 3455555332211 12334444433 36777
Q ss_pred EEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 300 LTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 300 ~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
.+-..+.+..++++++..-.+|.|.-|-
T Consensus 246 ~~dE~~~~~~~~~~~i~~~~~d~v~ik~ 273 (371)
T 2ovl_A 246 AGGENLHTLYDFHNAVRAGSLTLPEPDV 273 (371)
T ss_dssp EECTTCCSHHHHHHHHHHTCCSEECCCT
T ss_pred EeCCCCCCHHHHHHHHHcCCCCEEeeCc
Confidence 7665566777777766434577777664
No 216
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=29.89 E-value=2.5e+02 Score=23.94 Aligned_cols=45 Identities=16% Similarity=0.234 Sum_probs=34.1
Q ss_pred ccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEe
Q 040734 258 NSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTY 302 (361)
Q Consensus 258 ~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w 302 (361)
.++++.++.+.+.|++++-+.........++.+.+++.|+.+.+.
T Consensus 23 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~l~~~gl~~~~~ 67 (269)
T 3ngf_A 23 VPFLERFRLAAEAGFGGVEFLFPYDFDADVIARELKQHNLTQVLF 67 (269)
T ss_dssp SCHHHHHHHHHHTTCSEEECSCCTTSCHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHcCCCEEEecCCccCCHHHHHHHHHHcCCcEEEE
Confidence 468899999999999999876433222356777889999999763
No 217
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=29.85 E-value=1.6e+02 Score=21.44 Aligned_cols=78 Identities=9% Similarity=-0.038 Sum_probs=44.2
Q ss_pred HHHHHHHHHhcCCcEEEcCCccccC-ChHHHHHHHHcC----CEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHH
Q 040734 260 LEEAVKVCLEGGLQGIVSEVKGVFR-NPGAVTKIKESK----LSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEIT 332 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~~~~~-~~~~v~~~~~~G----l~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~ 332 (361)
..++........++.+.++....-. .-++++.+++.. ..+.+. +-.+.....+++ ..|+++++.- .+..+.
T Consensus 39 ~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~-~~~~~~~~~~~~-~~g~~~~l~kP~~~~~l~ 116 (132)
T 3lte_A 39 GFDAGIKLSTFEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPKILVV-SGLDKAKLQQAV-TEGADDYLEKPFDNDALL 116 (132)
T ss_dssp HHHHHHHHHHTCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCEEEEE-CCSCSHHHHHHH-HHTCCEEECSSCCHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCeEEEE-eCCChHHHHHHH-HhChHHHhhCCCCHHHHH
Confidence 3444455555555555555442211 136677777654 455555 444444565665 5899999873 456666
Q ss_pred HHHHHhc
Q 040734 333 EAVYDMI 339 (361)
Q Consensus 333 ~~l~~~~ 339 (361)
+.+++..
T Consensus 117 ~~i~~~~ 123 (132)
T 3lte_A 117 DRIHDLV 123 (132)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 6665543
No 218
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=29.80 E-value=1.2e+02 Score=27.28 Aligned_cols=64 Identities=23% Similarity=0.080 Sum_probs=42.9
Q ss_pred hHHHHHHHHcC--CEEEEeccCCCHHHHHHHHHhcCccEEEeCC--hHHHHHHHHHhcCCcccccccCcccc
Q 040734 286 PGAVTKIKESK--LSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL--VQEITEAVYDMIKPAKVVEKEDNKSL 353 (361)
Q Consensus 286 ~~~v~~~~~~G--l~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~--p~~~~~~l~~~~~~~~~~~~~~~~~~ 353 (361)
.+.++.+++.+ +++-+= +++.++..+.+ ..|+|.|+-|. |+.++++++... +....+.+++..+
T Consensus 186 ~~Av~~ar~~~~~~~IeVE--v~tl~ea~eAl-~aGaD~I~LDn~~~~~l~~av~~~~-~~v~ieaSGGIt~ 253 (287)
T 3tqv_A 186 AKAVTKAKKLDSNKVVEVE--VTNLDELNQAI-AAKADIVMLDNFSGEDIDIAVSIAR-GKVALEVSGNIDR 253 (287)
T ss_dssp HHHHHHHHHHCTTSCEEEE--ESSHHHHHHHH-HTTCSEEEEESCCHHHHHHHHHHHT-TTCEEEEESSCCT
T ss_pred HHHHHHHHhhCCCCcEEEE--eCCHHHHHHHH-HcCCCEEEEcCCCHHHHHHHHHhhc-CCceEEEECCCCH
Confidence 36677777664 566553 67888888887 69999999875 566666666543 3445555555543
No 219
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=29.65 E-value=34 Score=30.41 Aligned_cols=40 Identities=25% Similarity=0.281 Sum_probs=29.1
Q ss_pred hHHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 286 PGAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 286 ~~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
.++++++++. +++|.+=+-+.++++++.+. .++||++.-.
T Consensus 188 ~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~--~~ADGVIVGS 228 (252)
T 3tha_A 188 QDKVKEIRSFTNLPIFVGFGIQNNQDVKRMR--KVADGVIVGT 228 (252)
T ss_dssp HHHHHHHHTTCCSCEEEESSCCSHHHHHHHT--TTSSEEEECH
T ss_pred HHHHHHHHHhcCCcEEEEcCcCCHHHHHHHH--hcCCEEEECH
Confidence 4677888776 46666544799999998774 4799998753
No 220
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana}
Probab=29.32 E-value=2.1e+02 Score=25.90 Aligned_cols=35 Identities=17% Similarity=0.270 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHC
Q 040734 201 RVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQ 236 (361)
Q Consensus 201 ~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~ 236 (361)
...+++ +.+++.|.-+.+=++.|+...++.+.+..
T Consensus 158 e~~~aL-~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 192 (335)
T 3h7u_A 158 STWKAM-EALYDSGKARAIGVSNFSTKKLADLLELA 192 (335)
T ss_dssp HHHHHH-HHHHHTTSBSSEEEESCCHHHHHHHHHHC
T ss_pred HHHHHH-HHHHHcCCccEEEecCCCHHHHHHHHHhC
Confidence 444444 44556677788999999999998887764
No 221
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=29.28 E-value=96 Score=25.62 Aligned_cols=39 Identities=10% Similarity=-0.009 Sum_probs=29.4
Q ss_pred hHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEe
Q 040734 286 PGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIV 325 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T 325 (361)
.++++.++++|+++.+- |-.....++..+..+|++.++.
T Consensus 98 ~~~l~~l~~~g~~~~iv-S~~~~~~~~~~~~~~g~~~~~~ 136 (232)
T 3fvv_A 98 VDVVRGHLAAGDLCALV-TATNSFVTAPIARAFGVQHLIA 136 (232)
T ss_dssp HHHHHHHHHTTCEEEEE-ESSCHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHCCCEEEEE-eCCCHHHHHHHHHHcCCCEEEE
Confidence 47888999999999988 7666655666666689876554
No 222
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=29.09 E-value=2.1e+02 Score=27.13 Aligned_cols=103 Identities=10% Similarity=0.042 Sum_probs=59.9
Q ss_pred HHHHHHHHHHC-----CCCCEEEEccCCCcccc--ccccccHHHHHHHHHh-cCCcEEEcCCccc----c--------CC
Q 040734 226 PDAAVLIRKLQ-----STYPVFFLTNGGTEIFY--DVRRNSLEEAVKVCLE-GGLQGIVSEVKGV----F--------RN 285 (361)
Q Consensus 226 ~~~l~~l~~~~-----p~~~~~~l~~~~~~~~~--d~~~~~l~~~~~~~~~-~~~~~i~~~~~~~----~--------~~ 285 (361)
.++++.+++.. +++|+++=......... .+......+.++...+ .|++.|++..... . ..
T Consensus 225 ~evv~aVr~~v~~~~~~~f~v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~ 304 (419)
T 3l5a_A 225 LEVMRAVQEVIDKEAPDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFG 304 (419)
T ss_dssp HHHHHHHHHHHHHHCCTTCEEEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTT
T ss_pred HHHHHHHHHHHhhhcCCCeeEEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCcccc
Confidence 35566666653 46777765443211000 1111112223344456 7888888764321 0 12
Q ss_pred hHHHHHHHHc---CCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHH
Q 040734 286 PGAVTKIKES---KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQE 330 (361)
Q Consensus 286 ~~~v~~~~~~---Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~ 330 (361)
..+++.+++. .+.|++=|-+++++++++++ +. +|+|.--++-.
T Consensus 305 ~~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L-~~-aDlVaiGR~~I 350 (419)
T 3l5a_A 305 RPVNQIVYEHLAGRIPLIASGGINSPESALDAL-QH-ADMVGMSSPFV 350 (419)
T ss_dssp SBHHHHHHHHHTTSSCEEECSSCCSHHHHHHHG-GG-CSEEEESTHHH
T ss_pred HHHHHHHHHHcCCCCeEEEECCCCCHHHHHHHH-Hh-CCcHHHHHHHH
Confidence 2567777764 48888877889999999987 46 99998776543
No 223
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=28.98 E-value=93 Score=27.25 Aligned_cols=43 Identities=21% Similarity=0.182 Sum_probs=35.5
Q ss_pred cCChHHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 283 FRNPGAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 283 ~~~~~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
..+.++++++++. ++++.+=+-+++++++++++ . |+|+|+...
T Consensus 167 ~~~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~-~-gAd~VIVGS 211 (240)
T 1viz_A 167 LGDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-E-HADVIVVGN 211 (240)
T ss_dssp CCCHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHH-T-TCSEEEECT
T ss_pred cChHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHH-h-CCCEEEECh
Confidence 3467899999887 57887766799999999986 5 999999776
No 224
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=28.93 E-value=64 Score=24.05 Aligned_cols=16 Identities=6% Similarity=0.142 Sum_probs=8.9
Q ss_pred HHHHHHHHcCCEEEEe
Q 040734 287 GAVTKIKESKLSLLTY 302 (361)
Q Consensus 287 ~~v~~~~~~Gl~v~~w 302 (361)
++++.++++|+++.+.
T Consensus 25 ~~l~~L~~~G~~~~i~ 40 (137)
T 2pr7_A 25 NLLAAAKKNGVGTVIL 40 (137)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHCCCEEEEE
Confidence 4455555556555555
No 225
>3btn_A Antizyme inhibitor 1; TIM-like A/B barrel domain and A sheet domain, structural genomics, israel structural proteomics center, ISPC; 2.05A {Mus musculus}
Probab=28.92 E-value=3.8e+02 Score=25.36 Aligned_cols=103 Identities=10% Similarity=0.170 Sum_probs=62.2
Q ss_pred CCCEEEEcCC--HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHH
Q 040734 216 NRPIIFSTFQ--PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIK 293 (361)
Q Consensus 216 ~~rv~~~Sf~--~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~ 293 (361)
..++++..-+ ...++.+++..|+....+..... ......+...+.|. ++.+ .+..-+..++
T Consensus 37 ~tP~~vid~~~l~~n~~~~~~~~~~~~i~yavKAn----------~~~~v~~~l~~~G~-g~~v------aS~~E~~~~~ 99 (448)
T 3btn_A 37 KNAFFVGDLGKIVKKHSQWQTVVAQIKPFYTVKCN----------STPAVLEILAALGT-GFAC------SSKNEMALVQ 99 (448)
T ss_dssp CCCEEEEEHHHHHHHHHHHHHHCTTEEEEEEGGGC----------CCHHHHHHHHHHTC-EEEE------SSHHHHHHHH
T ss_pred CCCEEEEeHHHHHHHHHHHHHhCCCCeEEEEeeeC----------CCHHHHHHHHHcCC-cEEE------eCHHHHHHHH
Confidence 4456653322 23445667777765555555432 22344556666664 4432 2556677888
Q ss_pred HcCC--EEEEec-cCCCHHHHHHHHHhcCccEEEeCChHHHHHHHH
Q 040734 294 ESKL--SLLTYG-RLNNVAEAVYMQHLMGIDGVIVDLVQEITEAVY 336 (361)
Q Consensus 294 ~~Gl--~v~~w~-Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~~l~ 336 (361)
++|+ ..++|. ...++++++.++ ..||..++.|..+.+..+.+
T Consensus 100 ~aG~~~~~iv~~g~~k~~~ei~~a~-~~gv~~~~vds~~el~~l~~ 144 (448)
T 3btn_A 100 ELGVSPENIIFTSPCKQVSQIKYAA-KVGVNIMTCDNEIELKKIAR 144 (448)
T ss_dssp HTTCCGGGEEECCSSCCHHHHHHHH-HHTCCEEEECSHHHHHHHHH
T ss_pred HcCCChhhEEEcCCCCCHHHHHHHH-HcCCCEEEeCCHHHHHHHHH
Confidence 8887 345552 345677887776 58988788899888876544
No 226
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=28.84 E-value=2.5e+02 Score=23.31 Aligned_cols=95 Identities=13% Similarity=-0.024 Sum_probs=41.3
Q ss_pred CEEEEcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCC
Q 040734 218 PIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKL 297 (361)
Q Consensus 218 rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl 297 (361)
.++++--.. -..+++. .++|+.-+.-.+. .+-+++..++..+-..-.+.+... .+.+-....-.|+
T Consensus 53 dVIISRGgt--a~~lr~~-~~iPVV~I~~s~~---------Dil~al~~a~~~~~kIavvg~~~~--~~~~~~~~~ll~~ 118 (196)
T 2q5c_A 53 DAIISRGAT--SDYIKKS-VSIPSISIKVTRF---------DTMRAVYNAKRFGNELALIAYKHS--IVDKHEIEAMLGV 118 (196)
T ss_dssp SEEEEEHHH--HHHHHTT-CSSCEEEECCCHH---------HHHHHHHHHGGGCSEEEEEEESSC--SSCHHHHHHHHTC
T ss_pred eEEEECChH--HHHHHHh-CCCCEEEEcCCHh---------HHHHHHHHHHhhCCcEEEEeCcch--hhHHHHHHHHhCC
Confidence 456554222 2345554 4688876653321 234445555555432222222221 2222222233455
Q ss_pred EEEEeccCCCHHHHHHHH---HhcCccEEEeCC
Q 040734 298 SLLTYGRLNNVAEAVYMQ---HLMGIDGVIVDL 327 (361)
Q Consensus 298 ~v~~w~Tvn~~~~~~~~~---~~~GVdgI~TD~ 327 (361)
.+..+ ++++++++...+ +..|++.|+-+.
T Consensus 119 ~i~~~-~~~~~~e~~~~i~~l~~~G~~vvVG~~ 150 (196)
T 2q5c_A 119 KIKEF-LFSSEDEITTLISKVKTENIKIVVSGK 150 (196)
T ss_dssp EEEEE-EECSGGGHHHHHHHHHHTTCCEEEECH
T ss_pred ceEEE-EeCCHHHHHHHHHHHHHCCCeEEECCH
Confidence 55555 445554443321 235666666543
No 227
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*
Probab=28.83 E-value=72 Score=30.32 Aligned_cols=41 Identities=15% Similarity=0.081 Sum_probs=30.5
Q ss_pred hHHHHHHHHcCCEEEEeccCC------------C-HHHHHHHHHhcCccEEEeCC
Q 040734 286 PGAVTKIKESKLSLLTYGRLN------------N-VAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tvn------------~-~~~~~~~~~~~GVdgI~TD~ 327 (361)
+.+++++|++|+++..|.... . ..+++.+. ++|||.|=.|.
T Consensus 87 ~~l~~~ih~~Glk~Giw~~~g~~tC~~~pGs~~~~~~da~~fa-~WGvDylK~D~ 140 (404)
T 3hg3_A 87 RQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDIDAQTFA-DWGVDLLKFAG 140 (404)
T ss_dssp HHHHHHHHHTTCEEEEEEESSSBCTTSSBCCTTCHHHHHHHHH-HHTCCEEEEEC
T ss_pred HHHHHHHHHCCCeeEEEecCCccccCCCCccHHHHHHHHHHHH-HhCCcEEEecC
Confidence 578999999999999993221 1 23455554 79999999886
No 228
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=28.64 E-value=1.8e+02 Score=21.53 Aligned_cols=106 Identities=15% Similarity=0.121 Sum_probs=55.9
Q ss_pred CEEEEcCCHHHHHHHHHHCCC--CCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcccc--C-ChHHHHHH
Q 040734 218 PIIFSTFQPDAAVLIRKLQST--YPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVF--R-NPGAVTKI 292 (361)
Q Consensus 218 rv~~~Sf~~~~l~~l~~~~p~--~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~--~-~~~~v~~~ 292 (361)
+|++..-+......++..... +.+. .. .+..+++.......++.+.++...-- . .-++++.+
T Consensus 8 ~ilivdd~~~~~~~l~~~L~~~g~~v~-~~------------~~~~~a~~~l~~~~~dlvi~D~~l~~~~~~g~~~~~~l 74 (136)
T 3kto_A 8 IIYLVDHQKDARAALSKLLSPLDVTIQ-CF------------ASAESFMRQQISDDAIGMIIEAHLEDKKDSGIELLETL 74 (136)
T ss_dssp EEEEECSCHHHHHHHHHHHTTSSSEEE-EE------------SSHHHHTTSCCCTTEEEEEEETTGGGBTTHHHHHHHHH
T ss_pred eEEEEcCCHHHHHHHHHHHHHCCcEEE-Ee------------CCHHHHHHHHhccCCCEEEEeCcCCCCCccHHHHHHHH
Confidence 566666666666655554332 2111 11 12233333333334455555544221 1 13677777
Q ss_pred HHcC--CEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHHHHH
Q 040734 293 KESK--LSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEAVYD 337 (361)
Q Consensus 293 ~~~G--l~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~~ 337 (361)
++.+ .++++.+...+.....+++ ..|++++++- .+..+.+.+++
T Consensus 75 ~~~~~~~~ii~~s~~~~~~~~~~~~-~~ga~~~l~KP~~~~~l~~~i~~ 122 (136)
T 3kto_A 75 VKRGFHLPTIVMASSSDIPTAVRAM-RASAADFIEKPFIEHVLVHDVQQ 122 (136)
T ss_dssp HHTTCCCCEEEEESSCCHHHHHHHH-HTTCSEEEESSBCHHHHHHHHHH
T ss_pred HhCCCCCCEEEEEcCCCHHHHHHHH-HcChHHheeCCCCHHHHHHHHHH
Confidence 7764 6777773344555566665 6999999974 45556555554
No 229
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=28.54 E-value=1.7e+02 Score=28.85 Aligned_cols=56 Identities=18% Similarity=0.211 Sum_probs=39.3
Q ss_pred HHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcC---ccEEEe
Q 040734 265 KVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMG---IDGVIV 325 (361)
Q Consensus 265 ~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~G---VdgI~T 325 (361)
+.+...+++++|+....+ ....++++...+..+. . ++++.+++.+.. ..| +|.|..
T Consensus 79 dlA~~~gAdGVHLgq~dl--~~~~ar~~lg~~~iiG-~-S~ht~eea~~A~-~~G~~~aDYv~~ 137 (540)
T 3nl6_A 79 DVAMAIGADGIHVGQDDM--PIPMIRKLVGPDMVIG-W-SVGFPEEVDELS-KMGPDMVDYIGV 137 (540)
T ss_dssp HHHHHTTCSEEEECTTSS--CHHHHHHHHCTTSEEE-E-EECSHHHHHHHH-HTCC--CCEEEE
T ss_pred HHHHHcCCCEEEEChhhc--CHHHHHHHhCCCCEEE-E-ECCCHHHHHHHH-HcCCCCCCEEEE
Confidence 356678899999876543 4455565555565544 4 568899988875 689 999886
No 230
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=28.34 E-value=59 Score=28.07 Aligned_cols=59 Identities=5% Similarity=-0.097 Sum_probs=41.4
Q ss_pred HHHHhcCCcEEEcCCccc----------cCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEe
Q 040734 265 KVCLEGGLQGIVSEVKGV----------FRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIV 325 (361)
Q Consensus 265 ~~~~~~~~~~i~~~~~~~----------~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T 325 (361)
.+.....++.+-++.... ..-..++..+|..|++|.+= .|.+.+++..+. .+|||.+.=
T Consensus 172 ~~L~~l~~d~iKiD~~~v~~~~~~~~~~~~l~~i~~~a~~l~~~viae-GVEt~~~~~~l~-~~G~~~~QG 240 (250)
T 4f3h_A 172 QLLAHFQPAFLKLDRSITGDIASARESQEKIREITSRAQPTGILTVAE-FVADAQSMSSFF-TAGVDYVQG 240 (250)
T ss_dssp HHHTTSCCSEEEECHHHHTTTTTCSHHHHHHHHTHHHHHHHTCEEEEC-CCCCHHHHHHHH-HHTCSEECS
T ss_pred HHHhhCCCCEEEECHHHHHhHhcChhhHHHHHHHHHHHHHcCCEEEEe-ccCCHHHHHHHH-HcCCCEEee
Confidence 344455666665553211 01236788899999999999 699999998875 799997653
No 231
>2p3e_A Diaminopimelate decarboxylase; southeast collaboratory for struct genomics, riken spring-8 center; 1.99A {Aquifex aeolicus}
Probab=28.29 E-value=3.6e+02 Score=24.97 Aligned_cols=88 Identities=17% Similarity=0.017 Sum_probs=51.2
Q ss_pred HHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCC---EEEEeccCC
Q 040734 230 VLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKL---SLLTYGRLN 306 (361)
Q Consensus 230 ~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl---~v~~w~Tvn 306 (361)
+.+++..|+..+.+..... ......+.+...|+ ++.+. +..-+..+++.|+ .+...+...
T Consensus 49 ~~l~~~~~~~~l~~vvKan----------~~~~v~~~l~~~G~-~~~va------s~~E~~~~~~~G~~~~~Il~~g~~~ 111 (420)
T 2p3e_A 49 EAYRKAFPDALICYAVKAN----------FNPHLVKLLGELGA-GADIV------SGGELYLAKKAGIPPERIVYAGVGK 111 (420)
T ss_dssp HHHHHHSTTSEEEEEGGGC----------CCHHHHHHHHHTTC-EEEES------SHHHHHHHHHTTCCGGGEEECSSCC
T ss_pred HHHHHhCCcCeEEEEEecC----------CCHHHHHHHHHcCC-eEEEe------CHHHHHHHHHcCCChhHEEEeCCCC
Confidence 3455666655455544432 22344455556676 55432 4455667777787 355553334
Q ss_pred CHHHHHHHHHhcCccEEEeCChHHHHHHH
Q 040734 307 NVAEAVYMQHLMGIDGVIVDLVQEITEAV 335 (361)
Q Consensus 307 ~~~~~~~~~~~~GVdgI~TD~p~~~~~~l 335 (361)
++++++.++ ..|+..+..|..+.+..+-
T Consensus 112 ~~~~l~~a~-~~~i~~~~vds~~~l~~l~ 139 (420)
T 2p3e_A 112 TEKELTDAV-DSEILMFNVESRQELDVLN 139 (420)
T ss_dssp CHHHHHHHH-HTTCSEEEECCHHHHHHHH
T ss_pred CHHHHHHHH-HcCCCEEEeCCHHHHHHHH
Confidence 677777775 5788767778877776554
No 232
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=28.25 E-value=1.9e+02 Score=24.33 Aligned_cols=77 Identities=13% Similarity=0.153 Sum_probs=47.8
Q ss_pred HHHHHHHHhcCCcEEEcCCcc-----ccCChHHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhcCccEEEeCC-------
Q 040734 261 EEAVKVCLEGGLQGIVSEVKG-----VFRNPGAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL------- 327 (361)
Q Consensus 261 ~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~------- 327 (361)
.+..+.+...|++.+.+.... .-...+.++.+++. ++++++=|-+++.+++.+++ ..|+||++.-.
T Consensus 157 ~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~~~~pvia~GGi~~~~~~~~~~-~~Ga~~v~vgsal~~~~~ 235 (253)
T 1h5y_A 157 VKWAKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADSVRIPVIASGGAGRVEHFYEAA-AAGADAVLAASLFHFRVL 235 (253)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHHCSSCEEEESCCCSHHHHHHHH-HTTCSEEEESHHHHTTSS
T ss_pred HHHHHHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHhcCCCEEEeCCCCCHHHHHHHH-HcCCcHHHHHHHHHcCCC
Confidence 344455566777766542111 01134667777654 67888877899988998887 69999998532
Q ss_pred -hHHHHHHHHHh
Q 040734 328 -VQEITEAVYDM 338 (361)
Q Consensus 328 -p~~~~~~l~~~ 338 (361)
+..+.+++++.
T Consensus 236 ~~~~~~~~l~~~ 247 (253)
T 1h5y_A 236 SIAQVKRYLKER 247 (253)
T ss_dssp CHHHHHHHHHHT
T ss_pred CHHHHHHHHHHc
Confidence 44455555443
No 233
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=28.16 E-value=2.7e+02 Score=23.45 Aligned_cols=63 Identities=13% Similarity=0.058 Sum_probs=44.6
Q ss_pred cHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEE-EeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 259 SLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLL-TYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 259 ~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~-~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
+.++..+.+...+++.+.++... ++++++.+++ +++++ +. .+.+..++..+. ...+|+++-|.
T Consensus 64 ~~~~i~~~~~~~~ld~vQLHG~e---~~~~~~~l~~-~~~vika~-~v~~~~~l~~~~-~~~~d~~LlD~ 127 (205)
T 1nsj_A 64 EPEKILDVASYVQLNAVQLHGEE---PIELCRKIAE-RILVIKAV-GVSNERDMERAL-NYREFPILLDT 127 (205)
T ss_dssp CHHHHHHHHHHHTCSEEEECSCC---CHHHHHHHHT-TSEEEEEE-EESSHHHHHHHG-GGTTSCEEEEE
T ss_pred CHHHHHHHHHhhCCCEEEECCCC---CHHHHHHHhc-CCCEEEEE-EcCCHHHHHHHH-HcCCCEEEECC
Confidence 46677788888899999987653 7888888763 45554 55 577776665543 35588888874
No 234
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=28.12 E-value=1.5e+02 Score=25.13 Aligned_cols=67 Identities=13% Similarity=0.196 Sum_probs=44.9
Q ss_pred HHHHHHHHHhcCCcEEEcCCcc---c--cCChHHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhc---CccEEEeCC
Q 040734 260 LEEAVKVCLEGGLQGIVSEVKG---V--FRNPGAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLM---GIDGVIVDL 327 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~~---~--~~~~~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~---GVdgI~TD~ 327 (361)
..+..+.+...|+..+.+.... . -.+.+.++++++. +++|++-|-+++.+++.+++ .. |+|||+.-.
T Consensus 151 ~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~-~~~~~Gad~v~vG~ 226 (244)
T 2y88_A 151 LWDVLERLDSEGCSRFVVTDITKDGTLGGPNLDLLAGVADRTDAPVIASGGVSSLDDLRAIA-TLTHRGVEGAIVGK 226 (244)
T ss_dssp HHHHHHHHHHTTCCCEEEEETTTTTTTSCCCHHHHHHHHTTCSSCEEEESCCCSHHHHHHHH-TTGGGTEEEEEECH
T ss_pred HHHHHHHHHhCCCCEEEEEecCCccccCCCCHHHHHHHHHhCCCCEEEECCCCCHHHHHHHH-hhccCCCCEEEEcH
Confidence 3444555667777655433211 0 1245677777654 68899888899999999986 57 999998653
No 235
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa}
Probab=27.99 E-value=2.1e+02 Score=25.55 Aligned_cols=35 Identities=11% Similarity=0.136 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHC
Q 040734 201 RVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQ 236 (361)
Q Consensus 201 ~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~ 236 (361)
...+. ++.+++.|.-+.+=++.|+...++.+.+..
T Consensus 146 e~~~a-le~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 180 (312)
T 1zgd_A 146 GVWES-MEESLKLGLTKAIGVSNFSVKKLENLLSVA 180 (312)
T ss_dssp HHHHH-HHHHHHTTSBSCEEEESCCHHHHHHHHTTC
T ss_pred HHHHH-HHHHHHcCCCCEEEEeCCCHHHHHHHHHhC
Confidence 34444 444556677788999999999888887653
No 236
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=27.96 E-value=2.3e+02 Score=23.12 Aligned_cols=12 Identities=17% Similarity=0.288 Sum_probs=5.2
Q ss_pred EEeCChHHHHHH
Q 040734 323 VIVDLVQEITEA 334 (361)
Q Consensus 323 I~TD~p~~~~~~ 334 (361)
++-|.+..+..+
T Consensus 161 ~vGD~~~Di~~a 172 (222)
T 2nyv_A 161 IVGDTDADIEAG 172 (222)
T ss_dssp EEESSHHHHHHH
T ss_pred EECCCHHHHHHH
Confidence 344554444433
No 237
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=27.95 E-value=1.8e+02 Score=21.27 Aligned_cols=66 Identities=9% Similarity=0.075 Sum_probs=38.1
Q ss_pred CCcEEEcCCccccC-ChHHHHHHHHc----CCEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHHHHH
Q 040734 271 GLQGIVSEVKGVFR-NPGAVTKIKES----KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEAVYD 337 (361)
Q Consensus 271 ~~~~i~~~~~~~~~-~~~~v~~~~~~----Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~~ 337 (361)
.++.+.++....-. .-++++.+++. +..+.+.+.-.+.....+++ ..|++++++- .+..+.+.++.
T Consensus 55 ~~dlvi~d~~~~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~-~~g~~~~l~kP~~~~~l~~~i~~ 127 (140)
T 1k68_A 55 RPDLILLXLNLPKKDGREVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSY-DLHVNCYITKSANLSQLFQIVKG 127 (140)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHSTTGGGSCEEEEESCCCHHHHHHHH-HTTCSEEEECCSSHHHHHHHHHH
T ss_pred CCcEEEEecCCCcccHHHHHHHHHcCcccccccEEEEecCCcHHHHHHHH-HhchhheecCCCCHHHHHHHHHH
Confidence 44555555432111 13667777774 57788873334555566665 6999999864 34555555443
No 238
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=27.79 E-value=2e+02 Score=21.79 Aligned_cols=107 Identities=13% Similarity=0.066 Sum_probs=59.1
Q ss_pred CEEEEcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccC-ChHHHHHHHHc-
Q 040734 218 PIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFR-NPGAVTKIKES- 295 (361)
Q Consensus 218 rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~-~~~~v~~~~~~- 295 (361)
+|++..-+......++........-... ..+..+++.......++.+.++....-. .-++++.+++.
T Consensus 16 ~ILivdd~~~~~~~l~~~L~~~g~~v~~-----------~~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~ 84 (153)
T 3hv2_A 16 EILLVDSQEVILQRLQQLLSPLPYTLHF-----------ARDATQALQLLASREVDLVISAAHLPQMDGPTLLARIHQQY 84 (153)
T ss_dssp EEEEECSCHHHHHHHHHHHTTSSCEEEE-----------ESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHC
T ss_pred eEEEECCCHHHHHHHHHHhcccCcEEEE-----------ECCHHHHHHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHC
Confidence 5666666666666666554332211111 1134555566666666666666543211 13667777765
Q ss_pred -CCEEEEeccCCCHHHHHHHHHhcC-ccEEEeC--ChHHHHHHHH
Q 040734 296 -KLSLLTYGRLNNVAEAVYMQHLMG-IDGVIVD--LVQEITEAVY 336 (361)
Q Consensus 296 -Gl~v~~w~Tvn~~~~~~~~~~~~G-VdgI~TD--~p~~~~~~l~ 336 (361)
...+++.+.-.+.....+++ ..| ++++++- .+..+...++
T Consensus 85 ~~~~ii~~s~~~~~~~~~~~~-~~g~~~~~l~KP~~~~~l~~~i~ 128 (153)
T 3hv2_A 85 PSTTRILLTGDPDLKLIAKAI-NEGEIYRYLSKPWDDQELLLALR 128 (153)
T ss_dssp TTSEEEEECCCCCHHHHHHHH-HTTCCSEEECSSCCHHHHHHHHH
T ss_pred CCCeEEEEECCCCHHHHHHHH-hCCCcceEEeCCCCHHHHHHHHH
Confidence 57888883334455555665 588 9998874 3455554444
No 239
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=27.77 E-value=71 Score=29.64 Aligned_cols=37 Identities=14% Similarity=0.142 Sum_probs=29.5
Q ss_pred HHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEe
Q 040734 287 GAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIV 325 (361)
Q Consensus 287 ~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T 325 (361)
+.++++++. ++.|.+= ++-+.++++.+. +.|+|+|..
T Consensus 150 ~~i~~lr~~~~~~~vi~g-~v~t~e~A~~a~-~aGaD~I~v 188 (351)
T 2c6q_A 150 EFVKDVRKRFPQHTIMAG-NVVTGEMVEELI-LSGADIIKV 188 (351)
T ss_dssp HHHHHHHHHCTTSEEEEE-EECSHHHHHHHH-HTTCSEEEE
T ss_pred HHHHHHHHhcCCCeEEEE-eCCCHHHHHHHH-HhCCCEEEE
Confidence 467777777 7888876 788888888886 699999954
No 240
>3vab_A Diaminopimelate decarboxylase 1; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: LLP; 2.10A {Brucella melitensis BV}
Probab=27.66 E-value=4e+02 Score=25.20 Aligned_cols=68 Identities=12% Similarity=0.105 Sum_probs=43.9
Q ss_pred HHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCE--EEEec-cCCCHHHHHHHHHhcCccEEEeCChHHHHHHHH
Q 040734 261 EEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLS--LLTYG-RLNNVAEAVYMQHLMGIDGVIVDLVQEITEAVY 336 (361)
Q Consensus 261 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~--v~~w~-Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~~l~ 336 (361)
...++...+.|+ ++.+ .+..-+..++++|+. .++|. ...++++++.++ ..|+..+..|....+..+.+
T Consensus 87 ~~v~~~l~~~G~-g~dv------aS~~E~~~~~~~G~~~~~I~~~g~~k~~~ei~~a~-~~gv~~~~vds~~el~~l~~ 157 (443)
T 3vab_A 87 QAVLTALAKLGA-GADT------VSQGEIRRALAAGIPANRIVFSGVGKTPREMDFAL-EAGIYCFNVESEPELEILSA 157 (443)
T ss_dssp HHHHHHHHHTTC-EEEE------SSHHHHHHHHHTTCCGGGEEEECTTCCHHHHHHHH-HHTCSEEEECCHHHHHHHHH
T ss_pred HHHHHHHHHcCC-cEEE------eCHHHHHHHHHcCCChhhEEEcCCCCCHHHHHHHH-HCCCCEEEECCHHHHHHHHH
Confidence 345556666676 4432 255667777888873 23441 345778888776 58988788899888876543
No 241
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*
Probab=27.40 E-value=75 Score=29.60 Aligned_cols=42 Identities=19% Similarity=0.190 Sum_probs=30.3
Q ss_pred hHHHHHHHHcCCEEEEeccC-------------CC-HHHHHHHHHhcCccEEEeCCh
Q 040734 286 PGAVTKIKESKLSLLTYGRL-------------NN-VAEAVYMQHLMGIDGVIVDLV 328 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tv-------------n~-~~~~~~~~~~~GVdgI~TD~p 328 (361)
+.+++++|++|+++..|... +. ..+++.+ .++|||.|=.|+.
T Consensus 86 k~ladyih~~Glk~Giy~~~~~~~c~g~~~~~~~~~~~da~~~-a~wGvdylK~D~~ 141 (400)
T 4do4_A 86 PFLADYVHSLGLKLGIYADMGNFTCMGYPGTTLDKVVQDAQTF-AEWKVDMLKLDGC 141 (400)
T ss_dssp HHHHHHHHHTTCEEEEEEEBSSBCTTSCBCBCGGGHHHHHHHH-HHTTCCEEEEECT
T ss_pred HHHHHHHHHCCceEEEecCCCCcccCCCCchhHhHHHHHHHHH-HHhCCceEeeccC
Confidence 58899999999999998311 11 2234445 4799999998874
No 242
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=27.28 E-value=84 Score=27.44 Aligned_cols=43 Identities=28% Similarity=0.330 Sum_probs=35.6
Q ss_pred cCChHHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 283 FRNPGAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 283 ~~~~~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
..+.++++++++. ++++.+=+-+++++++++++ . |+|+|+...
T Consensus 175 ~~~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~-~-gAd~VIVGS 219 (234)
T 2f6u_A 175 YGNPELVAEVKKVLDKARLFYGGGIDSREKAREML-R-YADTIIVGN 219 (234)
T ss_dssp CCCHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHH-H-HSSEEEECH
T ss_pred cchHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHH-h-CCCEEEECh
Confidence 3467899999887 68887766799999999986 5 999999875
No 243
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=27.22 E-value=3e+02 Score=25.45 Aligned_cols=92 Identities=15% Similarity=0.074 Sum_probs=53.2
Q ss_pred CHHHHHHHHHHC-CCCCEEEEccCCCccccccccccHHHHHHHHH---hcCCcEEEcCCccccCChHHHHHHHH-cCCEE
Q 040734 225 QPDAAVLIRKLQ-STYPVFFLTNGGTEIFYDVRRNSLEEAVKVCL---EGGLQGIVSEVKGVFRNPGAVTKIKE-SKLSL 299 (361)
Q Consensus 225 ~~~~l~~l~~~~-p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~---~~~~~~i~~~~~~~~~~~~~v~~~~~-~Gl~v 299 (361)
+.+.++.+|+.. |++++.+-.+.+. +.++++++++ .+++..+--+... .+.+....+++ .++.|
T Consensus 193 ~~e~v~avR~avg~d~~l~vDan~~~---------~~~~a~~~~~~l~~~~i~~iE~P~~~--~~~~~~~~l~~~~~iPI 261 (393)
T 2og9_A 193 DIARVTAVRKHLGDAVPLMVDANQQW---------DRPTAQRMCRIFEPFNLVWIEEPLDA--YDHEGHAALALQFDTPI 261 (393)
T ss_dssp HHHHHHHHHHHHCTTSCEEEECTTCC---------CHHHHHHHHHHHGGGCCSCEECCSCT--TCHHHHHHHHHHCSSCE
T ss_pred HHHHHHHHHHHcCCCCEEEEECCCCC---------CHHHHHHHHHHHHhhCCCEEECCCCc--ccHHHHHHHHHhCCCCE
Confidence 356777777764 6777765443321 3455555554 3455555432221 13344555543 46888
Q ss_pred EEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 300 LTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 300 ~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
.+-..+.+..++++++..-.+|.|.-|-
T Consensus 262 a~dE~~~~~~~~~~~i~~~~~d~v~ik~ 289 (393)
T 2og9_A 262 ATGEMLTSAAEHGDLIRHRAADYLMPDA 289 (393)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECCCH
T ss_pred EeCCCcCCHHHHHHHHHCCCCCEEeeCc
Confidence 7766677888888877433488887764
No 244
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=27.19 E-value=73 Score=27.55 Aligned_cols=40 Identities=18% Similarity=0.016 Sum_probs=33.3
Q ss_pred hHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 286 PGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
..+++.+|+.|++|++= -|.+.+++..+. .+|||.+.=.+
T Consensus 199 ~~i~~~a~~~g~~viae-GVEt~~~~~~l~-~lG~~~~QG~~ 238 (259)
T 3s83_A 199 RSVVKLGQDLDLEVVAE-GVENAEMAHALQ-SLGCDYGQGFG 238 (259)
T ss_dssp HHHHHHHHHTTCEEEEC-CCCSHHHHHHHH-HHTCCEECBTT
T ss_pred HHHHHHHHHCCCeEEEE-eCCCHHHHHHHH-hcCCCEeecCc
Confidence 46788889999999999 699999998875 79999776543
No 245
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=27.00 E-value=79 Score=25.58 Aligned_cols=34 Identities=9% Similarity=0.175 Sum_probs=18.3
Q ss_pred hHHHHHHHHcCCEEEEeccCCC-HHHHHHHHHhcCc
Q 040734 286 PGAVTKIKESKLSLLTYGRLNN-VAEAVYMQHLMGI 320 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tvn~-~~~~~~~~~~~GV 320 (361)
.++++.++++|+++++- |-+. ...+...+..+|+
T Consensus 74 ~e~L~~L~~~G~~v~iv-T~~~~~~~~~~~l~~~gl 108 (187)
T 2wm8_A 74 PEVLKRLQSLGVPGAAA-SRTSEIEGANQLLELFDL 108 (187)
T ss_dssp HHHHHHHHHHTCCEEEE-ECCSCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHCCceEEEE-eCCCChHHHHHHHHHcCc
Confidence 35566666666666666 5444 3444444444554
No 246
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=26.81 E-value=2e+02 Score=21.38 Aligned_cols=49 Identities=12% Similarity=0.196 Sum_probs=30.9
Q ss_pred HHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHHHH
Q 040734 287 GAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEAVY 336 (361)
Q Consensus 287 ~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~ 336 (361)
++++.+++. ..++.+.+.-.+.....+++ ..|++++++- .+..+...++
T Consensus 66 ~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~-~~g~~~~l~kp~~~~~l~~~l~ 118 (143)
T 3jte_A 66 DILREIKKITPHMAVIILTGHGDLDNAILAM-KEGAFEYLRKPVTAQDLSIAIN 118 (143)
T ss_dssp HHHHHHHHHCTTCEEEEEECTTCHHHHHHHH-HTTCSEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCeEEEEECCCCHHHHHHHH-HhCcceeEeCCCCHHHHHHHHH
Confidence 666777665 47788883334455555665 6999998874 4455555544
No 247
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=26.77 E-value=2.9e+02 Score=25.09 Aligned_cols=93 Identities=11% Similarity=0.056 Sum_probs=54.4
Q ss_pred CHHHHHHHHHHC-CCCCEEEEccCCCccccccccccHHHHHHHH---HhcCCcEEEcCCccccCChHHHHHHHHc-CCEE
Q 040734 225 QPDAAVLIRKLQ-STYPVFFLTNGGTEIFYDVRRNSLEEAVKVC---LEGGLQGIVSEVKGVFRNPGAVTKIKES-KLSL 299 (361)
Q Consensus 225 ~~~~l~~l~~~~-p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~---~~~~~~~i~~~~~~~~~~~~~v~~~~~~-Gl~v 299 (361)
+.+.++.+|+.. |++++.+-.+.+. +.+++++++ ..+++..+--+... .+-+....++++ ++.|
T Consensus 175 ~~e~v~avr~a~g~~~~l~vDan~~~---------~~~~a~~~~~~l~~~~i~~iE~P~~~--~~~~~~~~l~~~~~iPI 243 (359)
T 1mdl_A 175 DLAVVRSIRQAVGDDFGIMVDYNQSL---------DVPAAIKRSQALQQEGVTWIEEPTLQ--HDYEGHQRIQSKLNVPV 243 (359)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCS---------CHHHHHHHHHHHHHHTCSCEECCSCT--TCHHHHHHHHHTCSSCE
T ss_pred HHHHHHHHHHHhCCCCEEEEECCCCC---------CHHHHHHHHHHHHHhCCCeEECCCCh--hhHHHHHHHHHhCCCCE
Confidence 356677777765 5677655443321 244444443 44566665433221 133555566543 6788
Q ss_pred EEeccCCCHHHHHHHHHhcCccEEEeCCh
Q 040734 300 LTYGRLNNVAEAVYMQHLMGIDGVIVDLV 328 (361)
Q Consensus 300 ~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p 328 (361)
.+-..+.+..++++++..-.+|+|.-|-.
T Consensus 244 ~~de~~~~~~~~~~~i~~~~~d~v~ik~~ 272 (359)
T 1mdl_A 244 QMGENWLGPEEMFKALSIGACRLAMPDAM 272 (359)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECCBTT
T ss_pred EeCCCCCCHHHHHHHHHcCCCCEEeecch
Confidence 77666778888888875445888887753
No 248
>4hjf_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, EAL domain, signaling protein; HET: MSE C2E; 1.75A {Caulobacter crescentus}
Probab=26.77 E-value=87 Score=28.71 Aligned_cols=51 Identities=18% Similarity=0.038 Sum_probs=39.6
Q ss_pred hHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCC---h---HHHHHHHHHh
Q 040734 286 PGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL---V---QEITEAVYDM 338 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~---p---~~~~~~l~~~ 338 (361)
..++..+|+.|+.|++= .|.+.+++..+. .+|||.+.=-+ | +.+.+++++.
T Consensus 272 ~~ii~la~~lg~~vvAE-GVEt~~q~~~L~-~lG~d~~QGy~~~~P~~~~~~~~~l~~~ 328 (340)
T 4hjf_A 272 RSVVKLGQDLDLEVVAE-GVENAEMAHALQ-SLGCDYGQGFGYAPALSPQEAEVYLNEA 328 (340)
T ss_dssp HHHHHHHHHHTCEEEEE-CCCSHHHHHHHH-HTTCCEEESTTTCCSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEE-eCCcHHHHHHHH-HcCCCEeecCccccCCCHHHHHHHHHhc
Confidence 46788899999999999 599999998875 79999876543 3 4556666553
No 249
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=26.51 E-value=2.2e+02 Score=21.94 Aligned_cols=74 Identities=14% Similarity=0.189 Sum_probs=41.1
Q ss_pred HHHHHhcCCcEEEcCCccccCC-hHHHHHHHH----cCCEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHHHH
Q 040734 264 VKVCLEGGLQGIVSEVKGVFRN-PGAVTKIKE----SKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEAVY 336 (361)
Q Consensus 264 ~~~~~~~~~~~i~~~~~~~~~~-~~~v~~~~~----~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~ 336 (361)
.+..+...++.+.+++..--.+ -++++.+++ ..++|+.-+...+.+...+.+ ..|++++++= .+..+.+.++
T Consensus 50 l~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~~~~~~~~~~-~~Ga~~yl~KP~~~~~L~~~i~ 128 (134)
T 3to5_A 50 LPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAKREQIIEAA-QAGVNGYIVKPFTAATLKEKLD 128 (134)
T ss_dssp HHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSCCHHHHHHHH-HTTCCEEEESSCCHHHHHHHHH
T ss_pred HHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCCCHHHHHHHH-HCCCCEEEECCCCHHHHHHHHH
Confidence 3333444444444444321111 266666665 347788873344556666675 6999999984 4555555554
Q ss_pred Hh
Q 040734 337 DM 338 (361)
Q Consensus 337 ~~ 338 (361)
+.
T Consensus 129 ~~ 130 (134)
T 3to5_A 129 KI 130 (134)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 250
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana}
Probab=26.41 E-value=2.6e+02 Score=25.28 Aligned_cols=35 Identities=14% Similarity=0.247 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHC
Q 040734 201 RVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQ 236 (361)
Q Consensus 201 ~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~ 236 (361)
...+++ +.+++.|.-+.+=++.|+...++.+.+..
T Consensus 154 e~~~aL-~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 188 (331)
T 3h7r_A 154 STWKAM-EALYDSGKARAIGVSNFSSKKLTDLLNVA 188 (331)
T ss_dssp HHHHHH-HHHHHTTSBSSEEEESCCHHHHHHHHHHC
T ss_pred HHHHHH-HHHHHcCCCcEEEecCCCHHHHHHHHHhc
Confidence 444444 44556777788999999999988887764
No 251
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=26.35 E-value=2.4e+02 Score=25.29 Aligned_cols=35 Identities=14% Similarity=0.164 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHC
Q 040734 201 RVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQ 236 (361)
Q Consensus 201 ~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~ 236 (361)
...+. ++.+++.|.-+.+=++.|+...++.+.+..
T Consensus 133 e~~~a-l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 167 (317)
T 1qwk_A 133 DVWRQ-FDAVYKAGLAKAVGVSNWNNDQISRALALG 167 (317)
T ss_dssp HHHHH-HHHHHHTTSBSSEEEESCCHHHHHHHHTTC
T ss_pred HHHHH-HHHHHHcCCeeEEEecCCCHHHHHHHHHhc
Confidence 34444 444556787788999999999888887653
No 252
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=26.26 E-value=3.1e+02 Score=24.24 Aligned_cols=55 Identities=9% Similarity=0.094 Sum_probs=31.3
Q ss_pred hHHHHHHHHcCCEEEEe-c-c-------CCCHHHHHHHHH---hcCccEEE-eC-----ChHHHHHHHHHhcC
Q 040734 286 PGAVTKIKESKLSLLTY-G-R-------LNNVAEAVYMQH---LMGIDGVI-VD-----LVQEITEAVYDMIK 340 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w-~-T-------vn~~~~~~~~~~---~~GVdgI~-TD-----~p~~~~~~l~~~~~ 340 (361)
.+.++.+|+.|+.|.++ + + ..+++.+.+++. ++|+|.|. .| .|....+.++...+
T Consensus 123 ~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~ 195 (295)
T 1ydn_A 123 SPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLA 195 (295)
T ss_dssp HHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHH
Confidence 45677888888877421 0 1 124555544433 57887764 22 47777776666543
No 253
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=26.16 E-value=3e+02 Score=23.26 Aligned_cols=51 Identities=18% Similarity=0.296 Sum_probs=31.8
Q ss_pred HHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHHHHHh
Q 040734 287 GAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEAVYDM 338 (361)
Q Consensus 287 ~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~~~ 338 (361)
++++.+++. ..+|.+.+.-.+.+...+++ ..|++++++= .++.+.+.++..
T Consensus 98 ~l~~~lr~~~~~~iI~lt~~~~~~~~~~a~-~~Ga~~yl~Kp~~~~~L~~~i~~~ 151 (249)
T 3q9s_A 98 DVVQRLRKNSALPIIVLTARDTVEEKVRLL-GLGADDYLIKPFHPDELLARVKVQ 151 (249)
T ss_dssp HHHHHHHTTCCCCEEEEESCCSHHHHHHHH-HHTCSEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCEEEEECCCCHHHHHHHH-HCCCcEEEECCCCHHHHHHHHHHH
Confidence 445555542 46777773334555566665 6899999973 566666666654
No 254
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=26.08 E-value=2.5e+02 Score=22.28 Aligned_cols=74 Identities=18% Similarity=0.151 Sum_probs=40.0
Q ss_pred HHHHHHHHhcCCcEEEcCCcccc-CChHHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHHH
Q 040734 261 EEAVKVCLEGGLQGIVSEVKGVF-RNPGAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEAV 335 (361)
Q Consensus 261 ~~~~~~~~~~~~~~i~~~~~~~~-~~~~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l 335 (361)
.+++.......++.+.++...-- ---++++.+++. ..+|++.+.-.+.+...+++ ..|++++++= .+..+...+
T Consensus 41 ~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~a~-~~Ga~~~l~KP~~~~~L~~~i 119 (184)
T 3rqi_A 41 DEALKLAGAEKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGYASIATAVQAV-KDGADNYLAKPANVESILAAL 119 (184)
T ss_dssp HHHHHHHTTSCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESSCCHHHHHHHH-HHTCSEEEESSCCHHHHHHHT
T ss_pred HHHHHHHhhCCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHH-HhCHHHheeCCCCHHHHHHHH
Confidence 34444444444555555443210 123666777664 47788883334455556665 5899988863 344444443
No 255
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei}
Probab=25.95 E-value=2.4e+02 Score=24.84 Aligned_cols=35 Identities=17% Similarity=0.121 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHC
Q 040734 201 RVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQ 236 (361)
Q Consensus 201 ~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~ 236 (361)
...+. ++.+++.|.-+.+=++.|+.+.++.+.+..
T Consensus 124 ~~~~a-l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 158 (281)
T 1vbj_A 124 DTWKA-FEKLYADKKVRAIGVSNFHEHHIEELLKHC 158 (281)
T ss_dssp HHHHH-HHHHHHTTSBSCEEEESCCHHHHHHHHTSC
T ss_pred HHHHH-HHHHHHCCCccEEEeeCCCHHHHHHHHHhC
Confidence 33444 444556777788999999999888887643
No 256
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=25.93 E-value=3.6e+02 Score=24.87 Aligned_cols=91 Identities=14% Similarity=0.086 Sum_probs=45.0
Q ss_pred HHHHHHHHHHC-CCCCEEEEccCCCccccccccccHHHHHHHHH---hcCCcEEEcCCccccCChHHHHHHHH-cCCEEE
Q 040734 226 PDAAVLIRKLQ-STYPVFFLTNGGTEIFYDVRRNSLEEAVKVCL---EGGLQGIVSEVKGVFRNPGAVTKIKE-SKLSLL 300 (361)
Q Consensus 226 ~~~l~~l~~~~-p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~---~~~~~~i~~~~~~~~~~~~~v~~~~~-~Gl~v~ 300 (361)
.+.++.+|+.. |++++.+-.+.+. +.++++++++ .+++..+--+... .+-+....+++ .++.|.
T Consensus 181 ~e~v~avR~a~G~d~~l~vDan~~~---------~~~~a~~~~~~l~~~~i~~iEqP~~~--~d~~~~~~l~~~~~iPIa 249 (391)
T 2qgy_A 181 IQFVEKVREIVGDELPLMLDLAVPE---------DLDQTKSFLKEVSSFNPYWIEEPVDG--ENISLLTEIKNTFNMKVV 249 (391)
T ss_dssp HHHHHHHHHHHCSSSCEEEECCCCS---------CHHHHHHHHHHHGGGCCSEEECSSCT--TCHHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHHhCCCCEEEEEcCCCC---------CHHHHHHHHHHHHhcCCCeEeCCCCh--hhHHHHHHHHhhCCCCEE
Confidence 45566666644 5666654333221 2444444443 3455554322211 12234444443 356666
Q ss_pred EeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 301 TYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 301 ~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
+-..+.+..++++++..-.+|.|.-|-
T Consensus 250 ~dE~~~~~~~~~~~i~~~~~d~v~ik~ 276 (391)
T 2qgy_A 250 TGEKQSGLVHFRELISRNAADIFNPDI 276 (391)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCBT
T ss_pred EcCCcCCHHHHHHHHHcCCCCEEEECc
Confidence 655566667776665333477776654
No 257
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=25.80 E-value=1e+02 Score=26.66 Aligned_cols=89 Identities=10% Similarity=0.055 Sum_probs=0.0
Q ss_pred cCCHHHHHHHHHHCCCCCE-EEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcccc-CChHHHH---HHHHcCC
Q 040734 223 TFQPDAAVLIRKLQSTYPV-FFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVF-RNPGAVT---KIKESKL 297 (361)
Q Consensus 223 Sf~~~~l~~l~~~~p~~~~-~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~-~~~~~v~---~~~~~Gl 297 (361)
+|.+..++.+|+..|+.+. ..+.-..+..+.+ .++. ++.+.++..... ...+.++ .+|++|+
T Consensus 49 t~G~~~v~~lr~~~p~~~~dvhLmv~dp~~~i~----------~~~~---Ad~itvH~ea~~~~~~~~i~~~~~i~~~G~ 115 (227)
T 1tqx_A 49 SFGPPVINNLKKYTKSIFFDVHLMVEYPEKYVP----------LLKT---SNQLTFHFEALNEDTERCIQLAKEIRDNNL 115 (227)
T ss_dssp CCCHHHHHHHGGGCSSCEEEEEEESSCGGGGGG----------GCTT---SSEEEEEGGGGTTCHHHHHHHHHHHHTTTC
T ss_pred hcCHHHHHHHHHhCCCCcEEEEEEEcCHHHHHH----------HHHh---CCEEEEeecCCccCHHHHHHHHHHHHHcCC
Q ss_pred EEEEeccCCCHHHHHHHHHhcC-ccEEE
Q 040734 298 SLLTYGRLNNVAEAVYMQHLMG-IDGVI 324 (361)
Q Consensus 298 ~v~~w~Tvn~~~~~~~~~~~~G-VdgI~ 324 (361)
++.+=.-..++.+..+.+..+| +|.|.
T Consensus 116 k~gvalnp~tp~~~~~~~l~~g~~D~Vl 143 (227)
T 1tqx_A 116 WCGISIKPKTDVQKLVPILDTNLINTVL 143 (227)
T ss_dssp EEEEEECTTSCGGGGHHHHTTTCCSEEE
T ss_pred eEEEEeCCCCcHHHHHHHhhcCCcCEEE
No 258
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=25.72 E-value=4e+02 Score=28.33 Aligned_cols=91 Identities=18% Similarity=0.272 Sum_probs=59.7
Q ss_pred HHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcC----------------------Cccc--
Q 040734 227 DAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSE----------------------VKGV-- 282 (361)
Q Consensus 227 ~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~----------------------~~~~-- 282 (361)
+.++.+++.. ++|+..-.... . ..+.+..+.+.+.|++++.+. ....
T Consensus 693 ~iv~~v~~~~-~~Pv~vK~~~~------~--~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~g 763 (1025)
T 1gte_A 693 NICRWVRQAV-QIPFFAKLTPN------V--TDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYG 763 (1025)
T ss_dssp HHHHHHHHHC-SSCEEEEECSC------S--SCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCE
T ss_pred HHHHHHHHhh-CCceEEEeCCC------h--HHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCC
Confidence 4666677664 57776543221 1 125556677778899988772 0000
Q ss_pred -cCC-------hHHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 283 -FRN-------PGAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 283 -~~~-------~~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
+.. .+++..+++. ++.|++=|-|.+.+++.+++ .+|+|+|+.-.
T Consensus 764 g~sg~~~~~~~~~~v~~v~~~~~~ipvi~~GGI~s~~da~~~l-~~Ga~~v~vg~ 817 (1025)
T 1gte_A 764 GVSGTAIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFL-HSGASVLQVCS 817 (1025)
T ss_dssp EEESGGGHHHHHHHHHHHHHHSTTCCEEEESSCCSHHHHHHHH-HTTCSEEEESH
T ss_pred CCCcccchhHHHHHHHHHHHHcCCCCEEEecCcCCHHHHHHHH-HcCCCEEEEee
Confidence 000 1467777665 68999888899999999997 59999999744
No 259
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=25.59 E-value=3.5e+02 Score=23.84 Aligned_cols=71 Identities=20% Similarity=0.207 Sum_probs=44.8
Q ss_pred HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEe
Q 040734 226 PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTY 302 (361)
Q Consensus 226 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w 302 (361)
.+.++.+|+. +++|++++..... +.....+...+.+...|++++...--..--..++++.++++|+.+...
T Consensus 80 ~~~v~~ir~~-~~~Pii~m~y~n~-----v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~l 150 (271)
T 1ujp_A 80 LELVREVRAL-TEKPLFLMTYLNP-----VLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFL 150 (271)
T ss_dssp HHHHHHHHHH-CCSCEEEECCHHH-----HHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECE
T ss_pred HHHHHHHHhc-CCCCEEEEecCcH-----HHHhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEE
Confidence 3667888887 7899888632210 111234556677778899976654211112468899999999875543
No 260
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A*
Probab=25.19 E-value=1.8e+02 Score=25.68 Aligned_cols=30 Identities=13% Similarity=0.118 Sum_probs=21.9
Q ss_pred HHHHHHhcCCCCEEEEcCCHHHHHHHHHHC
Q 040734 207 LKIVFEFAENRPIIFSTFQPDAAVLIRKLQ 236 (361)
Q Consensus 207 l~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~ 236 (361)
++.+++.|.-+.+=++.|+...++.+.+..
T Consensus 138 l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 167 (288)
T 4f40_A 138 FEQLYKEKKVRAIGVSNFHIHHLEDVLAMC 167 (288)
T ss_dssp HHHHHHTTSEEEEEEESCCHHHHHHHHTTC
T ss_pred HHHHHHcCCccEEEeccCCHHHHHHHHHhC
Confidence 444555676677889999999888887653
No 261
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=25.16 E-value=2.5e+02 Score=25.10 Aligned_cols=35 Identities=14% Similarity=0.074 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHC
Q 040734 201 RVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQ 236 (361)
Q Consensus 201 ~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~ 236 (361)
...+. ++.+++.|.-+.+=++.|+...++.+.+..
T Consensus 140 e~~~a-le~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 174 (316)
T 1us0_A 140 DTWAA-MEELVDEGLVKAIGISNFNHLQVEMILNKP 174 (316)
T ss_dssp HHHHH-HHHHHHTTSBSCEEEESCCHHHHHHHHTCT
T ss_pred HHHHH-HHHHHHCCCccEEEEecCCHHHHHHHHHhC
Confidence 34444 444556787788999999999888887643
No 262
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=25.04 E-value=2.1e+02 Score=21.13 Aligned_cols=49 Identities=6% Similarity=0.220 Sum_probs=29.5
Q ss_pred HHHHHHHHc----CCEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHHHH
Q 040734 287 GAVTKIKES----KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEAVY 336 (361)
Q Consensus 287 ~~v~~~~~~----Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~ 336 (361)
++++.+++. .+++++.+.-.+......++ ..|++++++= .+..+.+.+.
T Consensus 76 ~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~-~~g~~~~l~kP~~~~~L~~~~~ 130 (143)
T 2qvg_A 76 EFLKELRDDSSFTDIEVFVLTAAYTSKDKLAFE-SLNIRGHLIKPLDYGEAIKLFW 130 (143)
T ss_dssp HHHHHHTTSGGGTTCEEEEEESCCCHHHHHHHT-TTTCCEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHcCccccCCcEEEEeCCCCHHHHHHHH-hcCCCeEEECCCCHHHHHHHHH
Confidence 566666653 57777773334455555565 6899998863 3445544443
No 263
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=25.03 E-value=81 Score=26.75 Aligned_cols=36 Identities=14% Similarity=0.250 Sum_probs=29.1
Q ss_pred hHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccE
Q 040734 286 PGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDG 322 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdg 322 (361)
.+.+++++++|+.+..- |-+....+..++..+|+++
T Consensus 28 ~~~l~~l~~~g~~~~i~-TGr~~~~~~~~~~~l~~~~ 63 (227)
T 1l6r_A 28 IESIRSAEKKGLTVSLL-SGNVIPVVYALKIFLGING 63 (227)
T ss_dssp HHHHHHHHHTTCEEEEE-CSSCHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHCCCEEEEE-CCCCcHHHHHHHHHhCCCC
Confidence 46788889999999999 8888888877766678765
No 264
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=25.01 E-value=2e+02 Score=20.77 Aligned_cols=50 Identities=10% Similarity=0.191 Sum_probs=27.9
Q ss_pred HHHHHHHH-cCCEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHHHHH
Q 040734 287 GAVTKIKE-SKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEAVYD 337 (361)
Q Consensus 287 ~~v~~~~~-~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~~ 337 (361)
++++.+++ .+.++.+.+.-.+.....+.+ ..|++++++= .+..+...++.
T Consensus 63 ~~~~~lr~~~~~~ii~~t~~~~~~~~~~~~-~~ga~~~l~KP~~~~~l~~~i~~ 115 (120)
T 3f6p_A 63 EVCREVRKKYDMPIIMLTAKDSEIDKVIGL-EIGADDYVTKPFSTRELLARVKA 115 (120)
T ss_dssp HHHHHHHTTCCSCEEEEEESSCHHHHHHHH-HTTCCEEEEESCCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEECCCChHHHHHHH-hCCcceeEcCCCCHHHHHHHHHH
Confidence 44555543 246666662334454555565 6999998863 34555544443
No 265
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=24.89 E-value=93 Score=27.84 Aligned_cols=111 Identities=7% Similarity=-0.020 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHhcC-CCCEEEEcC-------CH---HHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHh
Q 040734 201 RVIQAILKIVFEFAE-NRPIIFSTF-------QP---DAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLE 269 (361)
Q Consensus 201 ~~v~~vl~~l~~~~~-~~rv~~~Sf-------~~---~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~ 269 (361)
.+.+.+.+.+.+++. ..++++--- .. ..+..+++. ++.+++--.+.. ..++ .+...
T Consensus 130 ~~~~~l~~~l~~~~~~~~~l~lEItE~~~~~~~~~~~~~l~~Lr~~--G~~ialDDFGtG-------~ssl----~~L~~ 196 (294)
T 2r6o_A 130 HLTRAVDRALARSGLRPDCLELEITENVMLVMTDEVRTCLDALRAR--GVRLALDDFGTG-------YSSL----SYLSQ 196 (294)
T ss_dssp HHHHHHHHHHHHHCCCGGGEEEEEEGGGGGGCCHHHHHHHHHHHHH--TCEEEEEEETSS-------CBCH----HHHHH
T ss_pred HHHHHHHHHHHHcCCCcCEEEEEEeCCchhhChHHHHHHHHHHHHC--CCEEEEECCCCC-------chhH----HHHHh
Confidence 466677777777774 345555311 11 234444444 454444322111 1123 34455
Q ss_pred cCCcEEEcCCccc---c-------CChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeC
Q 040734 270 GGLQGIVSEVKGV---F-------RNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD 326 (361)
Q Consensus 270 ~~~~~i~~~~~~~---~-------~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD 326 (361)
..++.|-++.... . +-..++..+|+.|+.|++= -|.+.+++..+. .+|||.+.=-
T Consensus 197 l~~d~iKID~sfv~~i~~~~~~~~iv~~ii~la~~lg~~vvAE-GVEt~~q~~~l~-~lG~d~~QGy 261 (294)
T 2r6o_A 197 LPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLGMEVVAE-GIETAQQYAFLR-DRGCEFGQGN 261 (294)
T ss_dssp SCCCEEEECHHHHTTTTTSHHHHHHHHHHHHHHHHTTCEEEEC-CCCSHHHHHHHH-HTTCCEECST
T ss_pred CCCCEEEECHHHHhhhhcChHHHHHHHHHHHHHHHCCCEEEEe-cCCcHHHHHHHH-HcCCCEEEcC
Confidence 6666665553321 0 1236788899999999999 699999998885 7999977643
No 266
>3tlq_A Regulatory protein YDIV; anti-FLHD4C2 factor, repress motility, transcription; 1.91A {Escherichia coli}
Probab=24.88 E-value=62 Score=27.92 Aligned_cols=37 Identities=3% Similarity=0.024 Sum_probs=31.9
Q ss_pred hHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEE
Q 040734 286 PGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVI 324 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~ 324 (361)
..+++.+|+.|+.|++= .|.+.+++..+. .+|||.+.
T Consensus 188 ~~ii~~a~~l~~~vvAE-GVEt~~q~~~l~-~lG~~~~Q 224 (242)
T 3tlq_A 188 RAIQAQISPCCNCIIAG-GIDTAEILAQIT-PFDFHALQ 224 (242)
T ss_dssp HHHHHHHTTTCSEEEEC-CCCSHHHHHHHG-GGCCSEEC
T ss_pred HHHHHHHHHcCCEEEEE-eCCcHHHHHHHH-HcCCCEEe
Confidence 57788999999999999 699999998885 79999764
No 267
>1f3t_A ODC, ornithine decarboxylase; beta-alpha-barrel, modified greek KEY beta-sheet, lyase; HET: PLP; 2.00A {Trypanosoma brucei} SCOP: b.49.2.3 c.1.6.1 PDB: 1qu4_A* 1szr_C* 2tod_A* 1njj_A*
Probab=24.76 E-value=4.3e+02 Score=24.65 Aligned_cols=50 Identities=14% Similarity=0.326 Sum_probs=26.3
Q ss_pred ChHHHHHHHHcCC--EEEEec-cCCCHHHHHHHHHhcCccEEEeCChHHHHHHH
Q 040734 285 NPGAVTKIKESKL--SLLTYG-RLNNVAEAVYMQHLMGIDGVIVDLVQEITEAV 335 (361)
Q Consensus 285 ~~~~v~~~~~~Gl--~v~~w~-Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~~l 335 (361)
+..-+..+++.|+ ...+|. ...++++++.++ ..|+..++.|..+.+..+.
T Consensus 91 s~~E~~~~~~~G~~~~~iv~~g~~k~~~~l~~a~-~~gv~~~~vds~~el~~l~ 143 (425)
T 1f3t_A 91 SNTEIQRVRGIGVPPEKIIYANPCKQISHIRYAR-DSGVDVMTFDCVDELEKVA 143 (425)
T ss_dssp SHHHHHHHHHTTCCGGGEEECCSSCCHHHHHHHH-HTTCCEEEECSHHHHHHHH
T ss_pred CHHHHHHHHHcCCChhhEEEcCCCCCHHHHHHHH-HCCCCEEEeCCHHHHHHHH
Confidence 3444555566665 233441 223455565554 4666556666666665543
No 268
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=24.55 E-value=2e+02 Score=20.75 Aligned_cols=78 Identities=5% Similarity=-0.036 Sum_probs=40.9
Q ss_pred HHHHHHHHhcCCcEEEcCCccccC-ChHHHHHHHHc----CCEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHH
Q 040734 261 EEAVKVCLEGGLQGIVSEVKGVFR-NPGAVTKIKES----KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITE 333 (361)
Q Consensus 261 ~~~~~~~~~~~~~~i~~~~~~~~~-~~~~v~~~~~~----Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~ 333 (361)
.+++.......++.+.++...--. .-++++.+++. ...+.+. |-....+....+ ..|++++++= .+..+.+
T Consensus 37 ~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~-s~~~~~~~~~~~-~~g~~~~l~KP~~~~~L~~ 114 (127)
T 3i42_A 37 TDALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAV-SGFAKNDLGKEA-CELFDFYLEKPIDIASLEP 114 (127)
T ss_dssp HHHHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEE-ECC-CTTCCHHH-HHHCSEEEESSCCHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEE-ECCcchhHHHHH-HHhhHHheeCCCCHHHHHH
Confidence 344444444555555554432111 13667777765 4677777 433322223444 4789988863 4566666
Q ss_pred HHHHhcC
Q 040734 334 AVYDMIK 340 (361)
Q Consensus 334 ~l~~~~~ 340 (361)
.+.....
T Consensus 115 ~i~~~~~ 121 (127)
T 3i42_A 115 ILQSIEG 121 (127)
T ss_dssp HHHHHC-
T ss_pred HHHHhhc
Confidence 6665443
No 269
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=24.53 E-value=2.1e+02 Score=20.88 Aligned_cols=51 Identities=8% Similarity=0.075 Sum_probs=31.5
Q ss_pred HHHHHHHHcC--CEEEEeccCC-CHHHHHHHHHhcCccEEEeC--ChHHHHHHHHHhc
Q 040734 287 GAVTKIKESK--LSLLTYGRLN-NVAEAVYMQHLMGIDGVIVD--LVQEITEAVYDMI 339 (361)
Q Consensus 287 ~~v~~~~~~G--l~v~~w~Tvn-~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~~~~ 339 (361)
++++.+++.+ .++.+. |-. +.....+++ ..|++++++- .+..+.+.++...
T Consensus 63 ~~~~~l~~~~~~~~ii~~-s~~~~~~~~~~~~-~~g~~~~l~kp~~~~~l~~~i~~~~ 118 (134)
T 3f6c_A 63 QVLETLRKRQYSGIIIIV-SAKNDHFYGKHCA-DAGANGFVSKKEGMNNIIAAIEAAK 118 (134)
T ss_dssp HHHHHHHHTTCCSEEEEE-ECC---CTHHHHH-HTTCSEEEEGGGCTHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCeEEEE-eCCCChHHHHHHH-HhCCCEEEeCCCCHHHHHHHHHHHH
Confidence 6667776653 677777 443 333455565 6999999873 4566666666543
No 270
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=24.52 E-value=1.5e+02 Score=27.23 Aligned_cols=105 Identities=8% Similarity=0.030 Sum_probs=59.0
Q ss_pred CHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcc--ccCChHHHHHHHHcCCEEEEe
Q 040734 225 QPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKG--VFRNPGAVTKIKESKLSLLTY 302 (361)
Q Consensus 225 ~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~--~~~~~~~v~~~~~~Gl~v~~w 302 (361)
+.+.++.+++..|+.++..+..... ...+.++.+.+.|++.+.+.... .-...+.++.++++|+.+...
T Consensus 69 ~~e~l~~i~~~~~~~~i~~l~~p~~---------~~~~~i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~ 139 (345)
T 1nvm_A 69 DLEYIEAVAGEISHAQIATLLLPGI---------GSVHDLKNAYQAGARVVRVATHCTEADVSKQHIEYARNLGMDTVGF 139 (345)
T ss_dssp HHHHHHHHHTTCSSSEEEEEECBTT---------BCHHHHHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHhhCCCCEEEEEecCCc---------ccHHHHHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHCCCEEEEE
Confidence 3556667777667777766532111 11334555666788776654221 112458889999999988665
Q ss_pred c---cCCCHHHHHHH---HHhcCccEEE-eC-----ChHHHHHHHHHh
Q 040734 303 G---RLNNVAEAVYM---QHLMGIDGVI-VD-----LVQEITEAVYDM 338 (361)
Q Consensus 303 ~---Tvn~~~~~~~~---~~~~GVdgI~-TD-----~p~~~~~~l~~~ 338 (361)
. +-.+++.+.++ +..+|++.|. .| .|..+.++++..
T Consensus 140 ~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l 187 (345)
T 1nvm_A 140 LMMSHMIPAEKLAEQGKLMESYGATCIYMADSGGAMSMNDIRDRMRAF 187 (345)
T ss_dssp EESTTSSCHHHHHHHHHHHHHHTCSEEEEECTTCCCCHHHHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCccCHHHHHHHHHHH
Confidence 1 11234433332 2357888664 23 277776666543
No 271
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=24.48 E-value=3.7e+02 Score=23.78 Aligned_cols=156 Identities=12% Similarity=0.098 Sum_probs=75.9
Q ss_pred cCHHHHHHhCC-CCceEEEEEecCCccchhhhHHHHHHHHHHHHHHHhcCC-CCEEEE-cCCH--------HHHHHHHHH
Q 040734 167 CTLQEAFQQVD-PNVGFNVELKFDDHIVYEQDYLIRVIQAILKIVFEFAEN-RPIIFS-TFQP--------DAAVLIRKL 235 (361)
Q Consensus 167 ptL~EvL~~~~-~~~~l~iEiK~~~~~~~~~~~~~~~v~~vl~~l~~~~~~-~rv~~~-Sf~~--------~~l~~l~~~ 235 (361)
..++++++.+. .++.-.+-+= .+. .-...++++.+++... .+++.. ...| +.+..+++.
T Consensus 17 ~d~~~vl~~a~~~gV~~~v~~g-~~~---------~~~~~~~~la~~~~~~~~~v~~~~GiHP~~~~~~~~~~~~~l~~l 86 (287)
T 3rcm_A 17 DQQAAIVERALEAGVTQMLLTG-TSL---------AVSEQALELCQQLDASGAHLFATAGVHPHDAKAWDTDSERQLRLL 86 (287)
T ss_dssp TCHHHHHHHHHHTTEEEEEECC-CSH---------HHHHHHHHHHHHHCTTSSSEEEEECCCGGGGGGCCTTHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCeEEEEec-CCH---------HHHHHHHHHHHhCCCCCceEEEEEEECcCccccCCHHHHHHHHHH
Confidence 47899999886 4665555542 222 2245566777666421 134432 2333 345555554
Q ss_pred CCCCCEEEEccCCCccc---c--ccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCC-----EEEEeccC
Q 040734 236 QSTYPVFFLTNGGTEIF---Y--DVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKL-----SLLTYGRL 305 (361)
Q Consensus 236 ~p~~~~~~l~~~~~~~~---~--d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl-----~v~~w~Tv 305 (361)
...-.+..+-+.+...+ . +.....+...+++|.+.+...+ ++... ...++++.+++.+. .++.| -
T Consensus 87 ~~~~~vvaIGEiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~-iH~r~--a~~~~l~il~~~~~~~~~~V~H~f--s 161 (287)
T 3rcm_A 87 LSEPRVRAVGECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVF-LHERD--ASERLLAILKDYRDHLTGAVVHCF--T 161 (287)
T ss_dssp HTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEE-EEEES--CHHHHHHHHHTTGGGCSCEEECSC--C
T ss_pred hcCCCeEEEEEeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEE-EEcCC--cHHHHHHHHHHcCCCCCeEEEEeC--C
Confidence 32212222211110000 0 1111234556777877775432 22222 24577777776542 23334 3
Q ss_pred CCHHHHHHHHHhcC----ccEEEeC--ChHHHHHHHHHh
Q 040734 306 NNVAEAVYMQHLMG----IDGVIVD--LVQEITEAVYDM 338 (361)
Q Consensus 306 n~~~~~~~~~~~~G----VdgI~TD--~p~~~~~~l~~~ 338 (361)
.+.+++++++ ++| +.|.+|. +...++++++..
T Consensus 162 G~~e~a~~~l-~~G~yis~~g~i~~~k~~~~l~~~v~~i 199 (287)
T 3rcm_A 162 GEREALFAYL-DLDLHIGITGWICDERRGTHLHPLVGNI 199 (287)
T ss_dssp CCHHHHHHHH-HTTCEEEECGGGGCTTTCGGGHHHHTTS
T ss_pred CCHHHHHHHH-HCCcEEEECchhccccCHHHHHHHHHhc
Confidence 4677777776 576 4444453 345666666653
No 272
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=24.40 E-value=1.8e+02 Score=25.55 Aligned_cols=42 Identities=26% Similarity=0.464 Sum_probs=32.3
Q ss_pred ChHHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 285 NPGAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 285 ~~~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
+++.++.+++. ++.|.+=+-+++++++.+++ ..|+|||+...
T Consensus 166 ~~~~l~~i~~~~~iPviv~gGI~t~eda~~~~-~~GAdgViVGS 208 (264)
T 1xm3_A 166 NPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAM-ELGADGVLLNT 208 (264)
T ss_dssp CHHHHHHHHHHCSSCBEEESCCCSHHHHHHHH-HTTCSEEEESH
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHH-HcCCCEEEEcH
Confidence 45677777664 57777765799999999986 69999998654
No 273
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=24.35 E-value=3e+02 Score=26.04 Aligned_cols=91 Identities=18% Similarity=0.088 Sum_probs=51.9
Q ss_pred HHHHHHHHHHC-CCCCEEEEccCCCccccccccccHHHHHHHHH---hcCCcEEEcCCccccCChHHHHHHHH-cCCEEE
Q 040734 226 PDAAVLIRKLQ-STYPVFFLTNGGTEIFYDVRRNSLEEAVKVCL---EGGLQGIVSEVKGVFRNPGAVTKIKE-SKLSLL 300 (361)
Q Consensus 226 ~~~l~~l~~~~-p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~---~~~~~~i~~~~~~~~~~~~~v~~~~~-~Gl~v~ 300 (361)
.+.++.+|+.. |++++.+-.+.. .+..+++++++ .+++..+--+... .+.+.+..+++ .++.|.
T Consensus 190 ~e~v~avR~avG~d~~L~vDan~~---------~t~~~A~~~~~~Le~~~i~~iEeP~~~--~~~~~~~~l~~~~~iPIa 258 (433)
T 3rcy_A 190 VEFCRKIRAAVGDKADLLFGTHGQ---------FTTAGAIRLGQAIEPYSPLWYEEPVPP--DNVGAMAQVARAVRIPVA 258 (433)
T ss_dssp HHHHHHHHHHHTTSSEEEECCCSC---------BCHHHHHHHHHHHGGGCCSEEECCSCT--TCHHHHHHHHHHSSSCEE
T ss_pred HHHHHHHHHHhCCCCeEEEeCCCC---------CCHHHHHHHHHHhhhcCCCEEECCCCh--hhHHHHHHHHhccCCCEE
Confidence 45666777665 566665433322 13455555544 4456555433221 13445555544 467777
Q ss_pred EeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 301 TYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 301 ~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
+-..+.+..++++++..-.+|.|..|-
T Consensus 259 ~dE~~~~~~~~~~~l~~g~~D~v~~d~ 285 (433)
T 3rcy_A 259 TGERLTTKAEFAPVLREGAAAILQPAL 285 (433)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCCH
T ss_pred ecCCCCCHHHHHHHHHcCCCCEEEeCc
Confidence 765677888888876433488887774
No 274
>3glk_A Acetyl-COA carboxylase 2; ATP binding, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis, manganese; 2.10A {Homo sapiens} PDB: 3gid_A 2hjw_A 2yl2_A
Probab=24.26 E-value=2.1e+02 Score=28.05 Aligned_cols=63 Identities=11% Similarity=0.143 Sum_probs=45.2
Q ss_pred cHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEE------eccCCCHHHHHHHHHhcCccE
Q 040734 259 SLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLT------YGRLNNVAEAVYMQHLMGIDG 322 (361)
Q Consensus 259 ~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~------w~Tvn~~~~~~~~~~~~GVdg 322 (361)
..+..++.++..+++.+++.+..+..++.+.+.+.+.|+.++. . ...|...+++++...||.-
T Consensus 111 d~~~ii~~a~~~~~daI~pg~gflsE~~~~a~~le~~Gi~~iGp~~~ai~-~~~DK~~~k~ll~~~GVPv 179 (540)
T 3glk_A 111 NVELIVDIAKRIPVQAVWAGWGHASENPKLPELLCKNGVAFLGPPSEAMW-ALGDKIASTVVAQTLQVPT 179 (540)
T ss_dssp CHHHHHHHHHHTTCSEEECCSSGGGGCTHHHHHHHHTTCEESSCCHHHHC----CHHHHHHHHHHTTCCB
T ss_pred cHHHHHHHHHHhCCCEEEeCCCccccCHHHHHHHHHcCCceeCCCHHHHH-HhCCHHHHHHHHHHcCCCC
Confidence 4677888999999999998876655577888889999997641 2 2456666667666788653
No 275
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=24.21 E-value=3.5e+02 Score=23.47 Aligned_cols=137 Identities=10% Similarity=-0.026 Sum_probs=79.7
Q ss_pred CHHHHHHhCCCCceEEEEEecCCccch--hhhHHHHHHHHHHHHHHHhcCCCCEEEE----c--CCHHHHHHHHHHCCCC
Q 040734 168 TLQEAFQQVDPNVGFNVELKFDDHIVY--EQDYLIRVIQAILKIVFEFAENRPIIFS----T--FQPDAAVLIRKLQSTY 239 (361)
Q Consensus 168 tL~EvL~~~~~~~~l~iEiK~~~~~~~--~~~~~~~~v~~vl~~l~~~~~~~rv~~~----S--f~~~~l~~l~~~~p~~ 239 (361)
+|.++|.. .++.++.|+|..++..- ...+ ...+.+...+.|. .-+.+- - -+.+.++.+++.. ++
T Consensus 36 ~~~~al~~--~~~~~IaE~k~aSPskg~i~~~~----p~~~A~~~~~~GA-~~isvlt~~~~f~G~~~~l~~i~~~v-~l 107 (254)
T 1vc4_A 36 SFKEALLR--PGLSVIAEVKRQSPSEGLIREVD----PVEAALAYARGGA-RAVSVLTEPHRFGGSLLDLKRVREAV-DL 107 (254)
T ss_dssp CHHHHHTS--SSCEEEEEECSCCTTTCCCCSCC----HHHHHHHHHHTTC-SEEEEECCCSSSCCCHHHHHHHHHHC-CS
T ss_pred CHHHHHhh--cCCcEEeeecCCCcCCCcCCCCC----HHHHHHHHHHcCC-CEEEEecchhhhccCHHHHHHHHHhc-CC
Confidence 67777763 26899999996554310 0001 1223333444442 222221 1 2678888888864 77
Q ss_pred CEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcccc-CChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhc
Q 040734 240 PVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVF-RNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLM 318 (361)
Q Consensus 240 ~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~-~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~ 318 (361)
|+.. .. +-.. .. -+..+...|++++++....+. .-.++++.++..|+.+.+- +++.+++.+.+ .+
T Consensus 108 Pvl~--kd-------fI~d-~~-qi~~a~~~GAD~VlL~~~~l~~~l~~l~~~a~~lGl~~lve--v~~~~E~~~a~-~~ 173 (254)
T 1vc4_A 108 PLLR--KD-------FVVD-PF-MLEEARAFGASAALLIVALLGELTGAYLEEARRLGLEALVE--VHTERELEIAL-EA 173 (254)
T ss_dssp CEEE--ES-------CCCS-HH-HHHHHHHTTCSEEEEEHHHHGGGHHHHHHHHHHHTCEEEEE--ECSHHHHHHHH-HH
T ss_pred CEEE--CC-------cCCC-HH-HHHHHHHcCCCEEEECccchHHHHHHHHHHHHHCCCeEEEE--ECCHHHHHHHH-Hc
Confidence 7642 11 1001 11 235577899999887544321 1246666777899998876 57777887775 68
Q ss_pred CccEEEeC
Q 040734 319 GIDGVIVD 326 (361)
Q Consensus 319 GVdgI~TD 326 (361)
|.|.|-.+
T Consensus 174 gad~IGvn 181 (254)
T 1vc4_A 174 GAEVLGIN 181 (254)
T ss_dssp TCSEEEEE
T ss_pred CCCEEEEc
Confidence 98877553
No 276
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=24.08 E-value=3.5e+02 Score=23.35 Aligned_cols=78 Identities=14% Similarity=0.048 Sum_probs=46.7
Q ss_pred HHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEeCC-hHHHHHHHHH
Q 040734 261 EEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL-VQEITEAVYD 337 (361)
Q Consensus 261 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~-p~~~~~~l~~ 337 (361)
.+..+-+...|+..+-+..+.. ...+.|+.+++. ++.+.+= ||-+.++++.++ +.|+++|++-. -..+.++.++
T Consensus 49 ~~~a~al~~gGi~~iEvt~~t~-~a~e~I~~l~~~~~~~~iGaG-TVlt~~~a~~Ai-~AGA~fIvsP~~~~~vi~~~~~ 125 (232)
T 4e38_A 49 IPLGKVLAENGLPAAEITFRSD-AAVEAIRLLRQAQPEMLIGAG-TILNGEQALAAK-EAGATFVVSPGFNPNTVRACQE 125 (232)
T ss_dssp HHHHHHHHHTTCCEEEEETTST-THHHHHHHHHHHCTTCEEEEE-CCCSHHHHHHHH-HHTCSEEECSSCCHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEeCCCC-CHHHHHHHHHHhCCCCEEeEC-CcCCHHHHHHHH-HcCCCEEEeCCCCHHHHHHHHH
Confidence 3344455566887776654421 123567766664 4555555 787888887776 68888888743 2334455555
Q ss_pred hcCC
Q 040734 338 MIKP 341 (361)
Q Consensus 338 ~~~~ 341 (361)
++.+
T Consensus 126 ~gi~ 129 (232)
T 4e38_A 126 IGID 129 (232)
T ss_dssp HTCE
T ss_pred cCCC
Confidence 5444
No 277
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=24.06 E-value=4.2e+02 Score=24.32 Aligned_cols=73 Identities=12% Similarity=-0.067 Sum_probs=47.8
Q ss_pred HHHHHHhcCCcEEEcCCccc----cCChHHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhcC-ccEEEeCC-----hHHH
Q 040734 263 AVKVCLEGGLQGIVSEVKGV----FRNPGAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLMG-IDGVIVDL-----VQEI 331 (361)
Q Consensus 263 ~~~~~~~~~~~~i~~~~~~~----~~~~~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~G-VdgI~TD~-----p~~~ 331 (361)
..+.+...|++++++..... ....++++.+++. ++.|++=|-+ +++++.+++ ..| +|+|.--+ |+..
T Consensus 255 ~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi-~~~~a~~~l-~~g~aD~V~igR~~i~~P~l~ 332 (365)
T 2gou_A 255 AAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAYQGVLIYAGRY-NAEKAEQAI-NDGLADMIGFGRPFIANPDLP 332 (365)
T ss_dssp HHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEESSC-CHHHHHHHH-HTTSCSEEECCHHHHHCTTHH
T ss_pred HHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHCCCcEEEeCCC-CHHHHHHHH-HCCCcceehhcHHHHhCchHH
Confidence 34455677888887765321 0123567777654 6888887778 788898887 466 99998654 5555
Q ss_pred HHHHHH
Q 040734 332 TEAVYD 337 (361)
Q Consensus 332 ~~~l~~ 337 (361)
.++.+.
T Consensus 333 ~~~~~g 338 (365)
T 2gou_A 333 ERLRHG 338 (365)
T ss_dssp HHHHHT
T ss_pred HHHHcC
Confidence 555543
No 278
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=24.05 E-value=2.2e+02 Score=23.51 Aligned_cols=71 Identities=7% Similarity=0.084 Sum_probs=34.5
Q ss_pred HHHHhcCCcEEEcCCccccCChHHHHHHH-HcCCE--EEEeccCCCHHHHHHHHHhcCccEEEeCCh-HHHHHHHHHh
Q 040734 265 KVCLEGGLQGIVSEVKGVFRNPGAVTKIK-ESKLS--LLTYGRLNNVAEAVYMQHLMGIDGVIVDLV-QEITEAVYDM 338 (361)
Q Consensus 265 ~~~~~~~~~~i~~~~~~~~~~~~~v~~~~-~~Gl~--v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p-~~~~~~l~~~ 338 (361)
+.+...|+..+++..... ..-+.++.+. +.+.. |..- ++.+.+.+..++ ..|+|+|..... ..+.+.++++
T Consensus 26 ~~~~~~G~~~i~l~~~~~-~~~~~i~~i~~~~~~~l~vg~g-~~~~~~~i~~a~-~~Gad~V~~~~~~~~~~~~~~~~ 100 (212)
T 2v82_A 26 GAVIDAGFDAVEIPLNSP-QWEQSIPAIVDAYGDKALIGAG-TVLKPEQVDALA-RMGCQLIVTPNIHSEVIRRAVGY 100 (212)
T ss_dssp HHHHHHTCCEEEEETTST-THHHHHHHHHHHHTTTSEEEEE-CCCSHHHHHHHH-HTTCCEEECSSCCHHHHHHHHHT
T ss_pred HHHHHCCCCEEEEeCCCh-hHHHHHHHHHHhCCCCeEEEec-cccCHHHHHHHH-HcCCCEEEeCCCCHHHHHHHHHc
Confidence 334455677766543321 0113344433 23433 3335 555666666664 578888875443 2333444443
No 279
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=23.77 E-value=1.3e+02 Score=26.33 Aligned_cols=63 Identities=14% Similarity=0.040 Sum_probs=38.7
Q ss_pred HHHHhcCCcEE--EcCCcccc------CChHHHHHHHHcCCEEEEecc----------C--CCHHHHHHHHHhcCccEEE
Q 040734 265 KVCLEGGLQGI--VSEVKGVF------RNPGAVTKIKESKLSLLTYGR----------L--NNVAEAVYMQHLMGIDGVI 324 (361)
Q Consensus 265 ~~~~~~~~~~i--~~~~~~~~------~~~~~v~~~~~~Gl~v~~w~T----------v--n~~~~~~~~~~~~GVdgI~ 324 (361)
+.+...|++.+ .+...... ...++++.+++.|+.+.++ + . ++..+..+...+.|+|.|.
T Consensus 106 ~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~-~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~ 184 (273)
T 2qjg_A 106 EEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAM-MYPRGKHIQNERDPELVAHAARLGAELGADIVK 184 (273)
T ss_dssp HHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEE-EEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEE-eCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEE
Confidence 45667888888 44333210 1235677888899999887 4 1 2223332333469999999
Q ss_pred eCCh
Q 040734 325 VDLV 328 (361)
Q Consensus 325 TD~p 328 (361)
+.++
T Consensus 185 ~~~~ 188 (273)
T 2qjg_A 185 TSYT 188 (273)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 9864
No 280
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=23.69 E-value=2.2e+02 Score=20.97 Aligned_cols=105 Identities=11% Similarity=0.096 Sum_probs=52.8
Q ss_pred CEEEEcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcccc-CChHHHHHHHHc-
Q 040734 218 PIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVF-RNPGAVTKIKES- 295 (361)
Q Consensus 218 rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~-~~~~~v~~~~~~- 295 (361)
+|++..-+......++......-..... .+..+++.......++.+.++....- -.-++++.+++.
T Consensus 5 ~iLivdd~~~~~~~l~~~l~~~~~v~~~------------~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~ 72 (140)
T 3n53_A 5 KILIIDQQDFSRIELKNFLDSEYLVIES------------KNEKEALEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSK 72 (140)
T ss_dssp EEEEECSCHHHHHHHHHHHTTTSEEEEE------------SSHHHHHHHHHHHCCSEEEEETTC------CHHHHHHTST
T ss_pred EEEEEeCCHHHHHHHHHHHHhcceEEEe------------CCHHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCc
Confidence 4555555665555555544333111111 12445555555555666655544211 123667777764
Q ss_pred ---CCEEEEeccCCC-HHHHHHHHHhcCccEEEeC--ChHHHHHHHH
Q 040734 296 ---KLSLLTYGRLNN-VAEAVYMQHLMGIDGVIVD--LVQEITEAVY 336 (361)
Q Consensus 296 ---Gl~v~~w~Tvn~-~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~ 336 (361)
+..+++. |-.. .....+++ ..|+++++.- .+..+.+.++
T Consensus 73 ~~~~~~ii~~-s~~~~~~~~~~~~-~~g~~~~l~KP~~~~~l~~~i~ 117 (140)
T 3n53_A 73 GLKNVPLILL-FSSEHKEAIVNGL-HSGADDYLTKPFNRNDLLSRIE 117 (140)
T ss_dssp TCTTCCEEEE-ECC----CTTTTT-TCCCSEEEESSCCHHHHHHHHH
T ss_pred ccCCCCEEEE-ecCCCHHHHHHHH-hcCCCeeeeCCCCHHHHHHHHH
Confidence 5777777 4443 33334454 5899999874 4555555544
No 281
>3kzp_A LMO0111 protein, putative diguanylate cyclase/phosphodiesterase; EAL-domain, structural genomics, PSI-2; 2.00A {Listeria monocytogenes}
Probab=23.68 E-value=59 Score=27.60 Aligned_cols=36 Identities=8% Similarity=0.121 Sum_probs=30.0
Q ss_pred hHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEE
Q 040734 286 PGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGV 323 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI 323 (361)
..++..+|+.|++|++= -|.+.+++..+. .+|||.+
T Consensus 189 ~~i~~~a~~lg~~viae-GVEt~~~~~~l~-~~G~~~~ 224 (235)
T 3kzp_A 189 KAWANFAQKNKLDFVVE-GIETKETMTLLE-SHGVSIF 224 (235)
T ss_dssp HHHHHHHHHTTCEEEEE-EECSTHHHHHHH-HTTCCSC
T ss_pred HHHHHHHHHcCCEEEEE-EecCHHHHHHHH-HcCCCEe
Confidence 46677889999999999 599999998875 7998743
No 282
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=23.61 E-value=2.5e+02 Score=27.62 Aligned_cols=68 Identities=10% Similarity=0.027 Sum_probs=49.4
Q ss_pred HHHHHHHHHhcCCcEEEcCCcc-----ccCChHHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 260 LEEAVKVCLEGGLQGIVSEVKG-----VFRNPGAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
..+..+.+...|+..+.+.... .-.+-++++.+.+. +++|++-|-+.+.+++.+++...|++|++.-.
T Consensus 454 ~~e~a~~~~~~Ga~~il~t~~~~dG~~~G~d~~li~~l~~~~~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~ 527 (555)
T 1jvn_A 454 VWELTRACEALGAGEILLNCIDKDGSNSGYDLELIEHVKDAVKIPVIASSGAGVPEHFEEAFLKTRADACLGAG 527 (555)
T ss_dssp HHHHHHHHHHTTCCEEEECCGGGTTTCSCCCHHHHHHHHHHCSSCEEECSCCCSHHHHHHHHHHSCCSEEEESH
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCCCCCCCCHHHHHHHHHhCCccEEEECCCCCHHHHHHHHHhcCChHHHHHH
Confidence 4455666778888887654311 01245788888765 79999998899999999987337999999764
No 283
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=23.53 E-value=2.4e+02 Score=21.29 Aligned_cols=48 Identities=15% Similarity=0.147 Sum_probs=27.2
Q ss_pred HHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHHH
Q 040734 287 GAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEAV 335 (361)
Q Consensus 287 ~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l 335 (361)
++++.+++. ++.+.+.+...+......++ ..|++++++- .+..+...+
T Consensus 64 ~~~~~l~~~~~~~pii~ls~~~~~~~~~~~~-~~g~~~~l~kP~~~~~L~~~i 115 (155)
T 1qkk_A 64 ALFRKILALDPDLPMILVTGHGDIPMAVQAI-QDGAYDFIAKPFAADRLVQSA 115 (155)
T ss_dssp HHHHHHHHHCTTSCEEEEECGGGHHHHHHHH-HTTCCEEEESSCCHHHHHHHH
T ss_pred HHHHHHHhhCCCCCEEEEECCCChHHHHHHH-hcCCCeEEeCCCCHHHHHHHH
Confidence 556666654 46777772223344445554 5899888863 344444444
No 284
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=23.30 E-value=2.2e+02 Score=20.81 Aligned_cols=67 Identities=16% Similarity=0.247 Sum_probs=40.1
Q ss_pred CcEEEcCCccccC-ChHHHHHHHHc---CCEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHHHHHhc
Q 040734 272 LQGIVSEVKGVFR-NPGAVTKIKES---KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEAVYDMI 339 (361)
Q Consensus 272 ~~~i~~~~~~~~~-~~~~v~~~~~~---Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~~~~ 339 (361)
++.+.++....-. .-++++.+++. ...+.+.+.-.+.....+++ ..|++++++- .+..+.+.+++..
T Consensus 53 ~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ii~~s~~~~~~~~~~~~-~~g~~~~l~KP~~~~~l~~~i~~~~ 125 (136)
T 3hdv_A 53 IGLMITDLRMQPESGLDLIRTIRASERAALSIIVVSGDTDVEEAVDVM-HLGVVDFLLKPVDLGKLLELVNKEL 125 (136)
T ss_dssp EEEEEECSCCSSSCHHHHHHHHHTSTTTTCEEEEEESSCCHHHHHHHH-HTTCSEEEESSCCHHHHHHHHHHHH
T ss_pred CcEEEEeccCCCCCHHHHHHHHHhcCCCCCCEEEEeCCCChHHHHHHH-hCCcceEEeCCCCHHHHHHHHHHHh
Confidence 4445544432111 13677777765 37788883344555566665 6999999974 5666666666543
No 285
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=23.30 E-value=2.4e+02 Score=24.74 Aligned_cols=35 Identities=23% Similarity=0.153 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHC
Q 040734 201 RVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQ 236 (361)
Q Consensus 201 ~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~ 236 (361)
...+. ++.+++.|.-+.+=++.|+...++.+.+..
T Consensus 121 ~~~~~-l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 155 (276)
T 3f7j_A 121 DTWRA-LEKLYKDGKIRAIGVSNFQVHHLEELLKDA 155 (276)
T ss_dssp HHHHH-HHHHHHTTSEEEEEEESCCHHHHHHHHHHC
T ss_pred HHHHH-HHHHHHcCCccEEEeccCCHHHHHHHHHhc
Confidence 33444 444555676677889999999888887654
No 286
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A*
Probab=23.21 E-value=2.4e+02 Score=25.26 Aligned_cols=35 Identities=11% Similarity=0.072 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHC
Q 040734 201 RVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQ 236 (361)
Q Consensus 201 ~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~ 236 (361)
...+.+ +.+++.|.-+.+=++.|+...++.+.+..
T Consensus 149 e~~~al-~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 183 (322)
T 1mi3_A 149 ETWKAL-EKLVAAGKIKSIGVSNFPGALLLDLLRGA 183 (322)
T ss_dssp HHHHHH-HHHHHTTSEEEEEEESCCHHHHHHHHHHC
T ss_pred HHHHHH-HHHHHcCCcCEEEEcCCCHHHHHHHHHhC
Confidence 344443 44556677777889999999888887754
No 287
>2qgh_A Diaminopimelate decarboxylase; lyase; HET: PLP LYS; 2.30A {Helicobacter pylori} PDB: 3c5q_A*
Probab=23.12 E-value=4.6e+02 Score=24.39 Aligned_cols=67 Identities=9% Similarity=-0.000 Sum_probs=45.6
Q ss_pred HHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCC--EEEEec-cCCCHHHHHHHHHhcCccEEEeCChHHHHHHH
Q 040734 261 EEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKL--SLLTYG-RLNNVAEAVYMQHLMGIDGVIVDLVQEITEAV 335 (361)
Q Consensus 261 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl--~v~~w~-Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~~l 335 (361)
....+...+.|+ ++.+ .+..-++.++++|+ ..++|. ...+++++++++ ..|++.+..|....+.++-
T Consensus 71 ~~v~~~l~~~G~-g~~v------as~~E~~~~~~~G~~~~~i~~~g~~k~~~~i~~a~-~~gv~~i~vds~~el~~l~ 140 (425)
T 2qgh_A 71 LSILSLLAHLES-GADC------VSIGEIQRALKAGIKPYRIVFSGVGKSAFEIEQAL-KLNILFLNVESFMELKTIE 140 (425)
T ss_dssp HHHHHHHHHTTC-EEEE------SSHHHHHHHHHTTCCGGGEEECCTTCCHHHHHHHH-HTTCSEEEECSHHHHHHHH
T ss_pred HHHHHHHHHcCC-eEEE------eCHHHHHHHHHcCCChhHEEEcCCCCCHHHHHHHH-HCCCCEEEeCCHHHHHHHH
Confidence 344556666776 5543 25667788888887 345562 234678888886 6899888899988877654
No 288
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=23.06 E-value=43 Score=29.30 Aligned_cols=116 Identities=8% Similarity=-0.010 Sum_probs=68.3
Q ss_pred ccCHHHHHHhCC-CCc-eEEEEEecCCccchhhhHHHHHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCCCEEE
Q 040734 166 LCTLQEAFQQVD-PNV-GFNVELKFDDHIVYEQDYLIRVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFF 243 (361)
Q Consensus 166 iptL~EvL~~~~-~~~-~l~iEiK~~~~~~~~~~~~~~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~~~~~ 243 (361)
...|.|.++.+. .+. .+++|+++.. ++ . -.+|.+..++.+|+..+. .+-+
T Consensus 25 ~~~l~~~i~~~~~~gad~lhvDvmDG~-----------fv--------------p--n~t~G~~~v~~lr~~~~~-DvhL 76 (237)
T 3cu2_A 25 WLQLNEEVTTLLENQINVLHFDIADGQ-----------FS--------------S--LFTVGAIGIKYFPTHCFK-DVHL 76 (237)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEEEEBSS-----------SS--------------S--CBCBCTHHHHTSCTTSEE-EEEE
T ss_pred cccHHHHHHHHHHcCCCEEEEEEecCc-----------cc--------------c--chhhhHHHHHHHhhhCCC-CeEE
Confidence 346777777764 333 5788988531 11 1 236777888888877654 3333
Q ss_pred EccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHc---------CCEEEEeccCCCHHHH-HH
Q 040734 244 LTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKES---------KLSLLTYGRLNNVAEA-VY 313 (361)
Q Consensus 244 l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~---------Gl~v~~w~Tvn~~~~~-~~ 313 (361)
.... .+..++.+.+.|++++.++........+.++.+++. |+++.+-....++.+. +.
T Consensus 77 Mv~~------------p~~~i~~~~~aGAd~itvH~ea~~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~l~~ 144 (237)
T 3cu2_A 77 MVRN------------QLEVAKAVVANGANLVTLQLEQYHDFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEP 144 (237)
T ss_dssp ECSC------------HHHHHHHHHHTTCSEEEEETTCTTSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGTT
T ss_pred EEEC------------HHHHHHHHHHcCCCEEEEecCCcccHHHHHHHHHhcccccccccCCceEEEEEeCCChHHHHHH
Confidence 3222 233455667889999666654322235788899999 9888765123344433 33
Q ss_pred HHHhcCccEE
Q 040734 314 MQHLMGIDGV 323 (361)
Q Consensus 314 ~~~~~GVdgI 323 (361)
++ -++|.|
T Consensus 145 ~l--~~~D~v 152 (237)
T 3cu2_A 145 YL--DQIDVI 152 (237)
T ss_dssp TT--TTCSEE
T ss_pred Hh--hcCcee
Confidence 32 478876
No 289
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=22.95 E-value=3.8e+02 Score=25.27 Aligned_cols=93 Identities=11% Similarity=-0.004 Sum_probs=53.4
Q ss_pred CHHHHHHHHHHC-CCCCEEEEccCCCccccccccccHHHHHHHHHhc---CCcEEEcCCccccCChHHHHHHHHc--CCE
Q 040734 225 QPDAAVLIRKLQ-STYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEG---GLQGIVSEVKGVFRNPGAVTKIKES--KLS 298 (361)
Q Consensus 225 ~~~~l~~l~~~~-p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~---~~~~i~~~~~~~~~~~~~v~~~~~~--Gl~ 298 (361)
+.+.++.+|+.. |++++.+-.+.. .++++++++++.+ ++..+--+... .+-+....++++ ++.
T Consensus 228 d~e~v~avR~a~G~d~~l~vDan~~---------~~~~~a~~~~~~l~~~~i~~iEqP~~~--~d~~~~~~l~~~~~~iP 296 (441)
T 2hxt_A 228 DIRRCRLARAAIGPDIAMAVDANQR---------WDVGPAIDWMRQLAEFDIAWIEEPTSP--DDVLGHAAIRQGITPVP 296 (441)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTC---------CCHHHHHHHHHTTGGGCCSCEECCSCT--TCHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHhcCCCCeEEEECCCC---------CCHHHHHHHHHHHHhcCCCeeeCCCCH--HHHHHHHHHHhhCCCCC
Confidence 446677777754 667665443332 2356666666543 44444322211 133555666654 578
Q ss_pred EEEeccCCCHHHHHHHHHhcCccEEEeCCh
Q 040734 299 LLTYGRLNNVAEAVYMQHLMGIDGVIVDLV 328 (361)
Q Consensus 299 v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p 328 (361)
|.+-..+.+..++.+++..-.+|.|.-|-.
T Consensus 297 Ia~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 326 (441)
T 2hxt_A 297 VSTGEHTQNRVVFKQLLQAGAVDLIQIDAA 326 (441)
T ss_dssp EEECTTCCSHHHHHHHHHHTCCSEECCCTT
T ss_pred EEEeCCcCCHHHHHHHHHcCCCCEEEeCcc
Confidence 877656778888877764345788777643
No 290
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=22.82 E-value=3.3e+02 Score=24.30 Aligned_cols=67 Identities=15% Similarity=0.079 Sum_probs=44.2
Q ss_pred cHHHHHHHHHhcCCcEEEcCCccccCCh----HHHHHHHHcCCEEEEecc--------CCCHHHH----HHHHHhcCccE
Q 040734 259 SLEEAVKVCLEGGLQGIVSEVKGVFRNP----GAVTKIKESKLSLLTYGR--------LNNVAEA----VYMQHLMGIDG 322 (361)
Q Consensus 259 ~l~~~~~~~~~~~~~~i~~~~~~~~~~~----~~v~~~~~~Gl~v~~w~T--------vn~~~~~----~~~~~~~GVdg 322 (361)
.+++.++.|+.+|++.|-++-...-++. ++|+++++. +.|.+=-- .-++.++ ++.+ +.|++.
T Consensus 111 ~~~~yl~~~k~lGF~~IEISdGti~l~~~~~~~lI~~a~~~-f~Vl~EvG~K~~~~~~~~~~~~~I~~~~~dL-eAGA~~ 188 (276)
T 1u83_A 111 KVNEFHRYCTYFGCEYIEISNGTLPMTNKEKAAYIADFSDE-FLVLSEVGSKDAELASRQSSEEWLEYIVEDM-EAGAEK 188 (276)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSSSCCCHHHHHHHHHHHTTT-SEEEEECSCCC------CCSTHHHHHHHHHH-HHTEEE
T ss_pred cHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHhh-cEEeeeccccCccccCCCCHHHHHHHHHHHH-HCCCcE
Confidence 4778889999999999887766543332 677888777 77766200 1122333 2334 589999
Q ss_pred EEeCC
Q 040734 323 VIVDL 327 (361)
Q Consensus 323 I~TD~ 327 (361)
||.+-
T Consensus 189 ViiEa 193 (276)
T 1u83_A 189 VITEA 193 (276)
T ss_dssp EEEC-
T ss_pred EEEee
Confidence 99876
No 291
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=22.79 E-value=2e+02 Score=23.38 Aligned_cols=33 Identities=12% Similarity=0.057 Sum_probs=17.2
Q ss_pred hHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcC
Q 040734 286 PGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMG 319 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~G 319 (361)
.++++.++++|+++++. |-+....+...+..+|
T Consensus 109 ~~~l~~l~~~g~~~~i~-T~~~~~~~~~~l~~~g 141 (231)
T 3kzx_A 109 IELLDTLKENNITMAIV-SNKNGERLRSEIHHKN 141 (231)
T ss_dssp HHHHHHHHHTTCEEEEE-EEEEHHHHHHHHHHTT
T ss_pred HHHHHHHHHCCCeEEEE-ECCCHHHHHHHHHHCC
Confidence 35566666666666666 4333333434333444
No 292
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=22.79 E-value=26 Score=30.88 Aligned_cols=36 Identities=17% Similarity=0.140 Sum_probs=0.0
Q ss_pred hcccc--cchHHHHHHHHhCCCCEEEEeeeee---cCCcEE
Q 040734 67 MQAIK--ENSIASFNSSAKYPLDFIEFDVQVT---KDGWPV 102 (361)
Q Consensus 67 ~~~~p--ENTl~Af~~A~~~Gad~vE~DV~lT---kDg~~V 102 (361)
+...| +++..-.+.+.+.|+|.||+++-.+ .||..|
T Consensus 25 ~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i 65 (262)
T 1rd5_A 25 TAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPII 65 (262)
T ss_dssp ETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHH
T ss_pred eCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHH
No 293
>2j66_A BTRK, decarboxylase; butirosin, AHBA biosynthesis, lyase; HET: PLP; 1.65A {Bacillus circulans}
Probab=22.67 E-value=4.6e+02 Score=24.29 Aligned_cols=109 Identities=14% Similarity=0.163 Sum_probs=63.9
Q ss_pred HHHHHHhcCCCCEEEEcCC--HHHHHHHHHHCC-CCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcccc
Q 040734 207 LKIVFEFAENRPIIFSTFQ--PDAAVLIRKLQS-TYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVF 283 (361)
Q Consensus 207 l~~l~~~~~~~rv~~~Sf~--~~~l~~l~~~~p-~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~ 283 (361)
.++.++++ .++++..-+ ...++.+++..| +..+.+..... ......+...+.|. ++.+
T Consensus 9 ~~l~~~~~--tP~~vid~~~l~~n~~~l~~~~~~~~~i~~avKan----------~~~~v~~~l~~~G~-g~~v------ 69 (428)
T 2j66_A 9 TALTKRFE--TPFYLYDGDFIEAHYRQLRSRTNPAIQFYLSLKAN----------NNIHLAKLFRQWGL-GVEV------ 69 (428)
T ss_dssp HHHHHHSC--SSEEEEEHHHHHHHHHHHHHTSCTTEEEEEEGGGC----------CCHHHHHHHHHTTC-EEEE------
T ss_pred HHHHHhhC--CCEEEEeHHHHHHHHHHHHHhcCCCcEEEEEeeeC----------CCHHHHHHHHHcCC-eEEE------
Confidence 33445554 345553222 233445666665 44444544432 23344555556663 4432
Q ss_pred CChHHHHHHHHcCC---EEEEeccCCCHHHHHHHHHhcCccEEEeCChHHHHHHH
Q 040734 284 RNPGAVTKIKESKL---SLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEITEAV 335 (361)
Q Consensus 284 ~~~~~v~~~~~~Gl---~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~~l 335 (361)
.+..-++.++++|+ +++..+...+.+++++++ ..|+..+..|....+.++-
T Consensus 70 as~~E~~~~~~~G~~~~~I~~~g~~k~~~~i~~a~-~~~v~~~~vds~~el~~l~ 123 (428)
T 2j66_A 70 ASAGELALARHAGFSAENIIFSGPGKKRSELEIAV-QSGIYCIIAESVEELFYIE 123 (428)
T ss_dssp SSHHHHHHHHHTTCCGGGEEECCSCCCHHHHHHHH-HHTCSEEEECSHHHHHHHH
T ss_pred eCHHHHHHHHHcCCCcCeEEEeCCCCCHHHHHHHH-HCCCCEEEECCHHHHHHHH
Confidence 25566788889997 366664445677888886 5898778889988876654
No 294
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=22.67 E-value=1.6e+02 Score=24.24 Aligned_cols=65 Identities=17% Similarity=0.083 Sum_probs=36.0
Q ss_pred cHHHHHHHHHhcC--CcEEEcCCccc-cCChHHHHHHHHc--CCEEEE-eccCCC-HHH-HHHHHHhcCccEEEe
Q 040734 259 SLEEAVKVCLEGG--LQGIVSEVKGV-FRNPGAVTKIKES--KLSLLT-YGRLNN-VAE-AVYMQHLMGIDGVIV 325 (361)
Q Consensus 259 ~l~~~~~~~~~~~--~~~i~~~~~~~-~~~~~~v~~~~~~--Gl~v~~-w~Tvn~-~~~-~~~~~~~~GVdgI~T 325 (361)
++++.++.++..+ +..+.+..... ..-+..++.+++. +..+.+ . -+.| ++. .+.+ ..+|+|+|+.
T Consensus 11 ~~~~~~~~~~~~~~~v~~iev~~~~~~~~g~~~i~~l~~~~~~~~i~~~l-~~~di~~~~~~~a-~~~Gad~v~v 83 (207)
T 3ajx_A 11 STEAALELAGKVAEYVDIIELGTPLIKAEGLSVITAVKKAHPDKIVFADM-KTMDAGELEADIA-FKAGADLVTV 83 (207)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECHHHHHHHCTHHHHHHHHHSTTSEEEEEE-EECSCHHHHHHHH-HHTTCSEEEE
T ss_pred CHHHHHHHHHHhhccCCEEEECcHHHHhhCHHHHHHHHHhCCCCeEEEEE-EecCccHHHHHHH-HhCCCCEEEE
Confidence 3555555554433 35554433211 1246788888877 777765 2 2334 555 3444 4689999873
No 295
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=22.62 E-value=4.6e+02 Score=24.18 Aligned_cols=65 Identities=18% Similarity=0.102 Sum_probs=44.6
Q ss_pred HHHHHHhcCCcEEEcCCccccCChHHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhcC-ccEEEeCChHHH
Q 040734 263 AVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLMG-IDGVIVDLVQEI 331 (361)
Q Consensus 263 ~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~G-VdgI~TD~p~~~ 331 (361)
..+.+...|++.+++.... ..+.+++.+++. ++.|++-|-+ +++++++++. .| +|+|.--++-..
T Consensus 247 la~~l~~~Gvd~i~v~~~~--~~~~~~~~ik~~~~iPvi~~Ggi-t~e~a~~~l~-~g~aD~V~iGR~~la 313 (362)
T 4ab4_A 247 VARELGKRGIAFICSRERE--ADDSIGPLIKEAFGGPYIVNERF-DKASANAALA-SGKADAVAFGVPFIA 313 (362)
T ss_dssp HHHHHHHTTCSEEEEECCC--CTTCCHHHHHHHHCSCEEEESSC-CHHHHHHHHH-TTSCSEEEESHHHHH
T ss_pred HHHHHHHhCCCEEEECCCC--CCHHHHHHHHHHCCCCEEEeCCC-CHHHHHHHHH-cCCccEEEECHHhHh
Confidence 3444567789988876543 123566666654 6778777677 8999999874 65 999998775444
No 296
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A
Probab=22.59 E-value=2.2e+02 Score=25.08 Aligned_cols=65 Identities=14% Similarity=0.124 Sum_probs=35.8
Q ss_pred cCHHHHHHhCCC-CceEEEEEecCCccchhhhHHHHHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHC
Q 040734 167 CTLQEAFQQVDP-NVGFNVELKFDDHIVYEQDYLIRVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQ 236 (361)
Q Consensus 167 ptL~EvL~~~~~-~~~l~iEiK~~~~~~~~~~~~~~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~ 236 (361)
-.+++-|+.+.- .+-+++ +=.++.. ........+. ++.+++.|.-+.+=++.|+...++.+.+..
T Consensus 96 ~~~~~SL~rL~~dyiDl~l-lH~p~~~---~~~~~e~~~a-l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 161 (283)
T 2wzm_A 96 AAARASLERLGLDYVDLYL-IHWPGGD---TSKYVDSWGG-LMKVKEDGIARSIGVCNFGAEDLETIVSLT 161 (283)
T ss_dssp HHHHHHHHHHTCSCEEEEE-ECCCTTC---HHHHHHHHHH-HHHHHHTTSEEEEEEESCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEeEEE-EcCCCCC---CCCHHHHHHH-HHHHHHcCCccEEEEcCCCHHHHHHHHHhc
Confidence 456677777763 233322 2223221 0111233333 444555676677889999999888887764
No 297
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=22.58 E-value=2.4e+02 Score=20.85 Aligned_cols=52 Identities=12% Similarity=0.020 Sum_probs=32.6
Q ss_pred cHHHHHHHHHhcCCcEEEcCCcccc-CChHHHHHHHHcCCEEEEeccCCCHHHHHH
Q 040734 259 SLEEAVKVCLEGGLQGIVSEVKGVF-RNPGAVTKIKESKLSLLTYGRLNNVAEAVY 313 (361)
Q Consensus 259 ~l~~~~~~~~~~~~~~i~~~~~~~~-~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~ 313 (361)
+.+.++.+.+.+|+..+.+-+.... .-.++-+..+.+|..|.+- | ++.++.+
T Consensus 63 waekairfvkslgaqvliiiydqdqnrleefsrevrrrgfevrtv-t--spddfkk 115 (134)
T 2l69_A 63 WAEKAIRFVKSLGAQVLIIIYDQDQNRLEEFSREVRRRGFEVRTV-T--SPDDFKK 115 (134)
T ss_dssp HHHHHHHHHHHHCCCCEEEEECSCHHHHHHHHHHHHHTTCCEEEE-S--SHHHHHH
T ss_pred HHHHHHHHHHhcCCeEEEEEEeCchhHHHHHHHHHHhcCceEEEe-c--ChHHHHH
Confidence 3566788888888876655444310 1236677788888887765 3 5555543
No 298
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=22.56 E-value=4.1e+02 Score=24.50 Aligned_cols=65 Identities=8% Similarity=-0.058 Sum_probs=44.5
Q ss_pred HHHHHHhcCCcEEEcCCccccCChHHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhcC-ccEEEeCChHHH
Q 040734 263 AVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLMG-IDGVIVDLVQEI 331 (361)
Q Consensus 263 ~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~G-VdgI~TD~p~~~ 331 (361)
..+.+.+.|++.+++..... .+.+++.+++. ++.|++-|-+ +++++++++ ..| +|+|.--++-..
T Consensus 255 la~~l~~~Gvd~i~v~~~~~--~~~~~~~ik~~~~iPvi~~Ggi-t~e~a~~~l-~~G~aD~V~iGR~~la 321 (361)
T 3gka_A 255 VARELGRRRIAFLFARESFG--GDAIGQQLKAAFGGPFIVNENF-TLDSAQAAL-DAGQADAVAWGKLFIA 321 (361)
T ss_dssp HHHHHHHTTCSEEEEECCCS--TTCCHHHHHHHHCSCEEEESSC-CHHHHHHHH-HTTSCSEEEESHHHHH
T ss_pred HHHHHHHcCCCEEEECCCCC--CHHHHHHHHHHcCCCEEEeCCC-CHHHHHHHH-HcCCccEEEECHHhHh
Confidence 34445677899888765431 33566777664 6778777667 899999987 466 999987765433
No 299
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=22.50 E-value=2.4e+02 Score=20.87 Aligned_cols=76 Identities=13% Similarity=0.133 Sum_probs=41.5
Q ss_pred HHHHHHHHhcCCcEEEcCCccccCC-hHHHHHHHHc----CCEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHH
Q 040734 261 EEAVKVCLEGGLQGIVSEVKGVFRN-PGAVTKIKES----KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITE 333 (361)
Q Consensus 261 ~~~~~~~~~~~~~~i~~~~~~~~~~-~~~v~~~~~~----Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~ 333 (361)
.++++......++.+.++...--.+ -++++.+++. .+.+.+.+.-.+.....+.+ ..|++++++= .+..+.+
T Consensus 38 ~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~-~~ga~~~l~KP~~~~~L~~ 116 (136)
T 3t6k_A 38 EEALQQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQGDISAKIAGF-EAGANDYLAKPFEPQELVY 116 (136)
T ss_dssp HHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTTCHHHHHHHH-HHTCSEEEETTCCHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCCCHHHHHHHH-hcCcceEEeCCCCHHHHHH
Confidence 3444444444455555544321111 3667777663 46777772334444455555 5899998873 4555555
Q ss_pred HHHH
Q 040734 334 AVYD 337 (361)
Q Consensus 334 ~l~~ 337 (361)
.++.
T Consensus 117 ~i~~ 120 (136)
T 3t6k_A 117 RVKN 120 (136)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 300
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=22.45 E-value=57 Score=28.54 Aligned_cols=29 Identities=14% Similarity=0.172 Sum_probs=23.7
Q ss_pred ccchHHHHHHHHhCCCCEEEEeeeeecCCcEE
Q 040734 71 KENSIASFNSSAKYPLDFIEFDVQVTKDGWPV 102 (361)
Q Consensus 71 pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~V 102 (361)
.-|-....+.+.+.|+|++++||. ||++|
T Consensus 25 ~~~l~~~i~~~~~~gad~lhvDvm---DG~fv 53 (237)
T 3cu2_A 25 WLQLNEEVTTLLENQINVLHFDIA---DGQFS 53 (237)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEEEE---BSSSS
T ss_pred cccHHHHHHHHHHcCCCEEEEEEe---cCccc
Confidence 446667888889999999999995 78766
No 301
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=22.38 E-value=1.3e+02 Score=26.97 Aligned_cols=65 Identities=18% Similarity=0.235 Sum_probs=42.9
Q ss_pred hHHHHHHHHcC---CEEEEeccCCCHHHHHHHHHhcCccEEEeCC--hHHHHHHHHHhcC--CcccccccCcccc
Q 040734 286 PGAVTKIKESK---LSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL--VQEITEAVYDMIK--PAKVVEKEDNKSL 353 (361)
Q Consensus 286 ~~~v~~~~~~G---l~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~--p~~~~~~l~~~~~--~~~~~~~~~~~~~ 353 (361)
...++.+++.. +++.+= +++.++..+.+ ..|+|.|+-|. |+.+.++++.... +....+.+++..+
T Consensus 180 ~~av~~ar~~~~~~~~I~VE--V~tleea~eA~-~aGaD~I~LDn~~~e~l~~av~~l~~~~~~v~ieASGGIt~ 251 (285)
T 1o4u_A 180 ERAVQEVRKIIPFTTKIEVE--VENLEDALRAV-EAGADIVMLDNLSPEEVKDISRRIKDINPNVIVEVSGGITE 251 (285)
T ss_dssp HHHHHHHHTTSCTTSCEEEE--ESSHHHHHHHH-HTTCSEEEEESCCHHHHHHHHHHHHHHCTTSEEEEEECCCT
T ss_pred HHHHHHHHHhCCCCceEEEE--eCCHHHHHHHH-HcCCCEEEECCCCHHHHHHHHHHhhccCCCceEEEECCCCH
Confidence 35677777775 566664 67888888887 69999999887 4666666655422 2344555555433
No 302
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=22.34 E-value=4.5e+02 Score=24.00 Aligned_cols=91 Identities=8% Similarity=-0.028 Sum_probs=44.1
Q ss_pred HHHHHHHHHHC-CCCCEEEEccCCCccccccccccHHHHHHHH---HhcCCcEEEcCCccccCChHHHHHHHH-cCCEEE
Q 040734 226 PDAAVLIRKLQ-STYPVFFLTNGGTEIFYDVRRNSLEEAVKVC---LEGGLQGIVSEVKGVFRNPGAVTKIKE-SKLSLL 300 (361)
Q Consensus 226 ~~~l~~l~~~~-p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~---~~~~~~~i~~~~~~~~~~~~~v~~~~~-~Gl~v~ 300 (361)
.+.++.+|+.. |++++.+-.+.+. +.+++++++ ..+++..+--+... .+.+....+++ .++.|.
T Consensus 187 ~e~v~avr~a~g~d~~l~vDan~~~---------~~~~a~~~~~~l~~~~i~~iE~P~~~--~~~~~~~~l~~~~~iPIa 255 (382)
T 1rvk_A 187 LKACAAVREAVGPDIRLMIDAFHWY---------SRTDALALGRGLEKLGFDWIEEPMDE--QSLSSYKWLSDNLDIPVV 255 (382)
T ss_dssp HHHHHHHHHHHCTTSEEEEECCTTC---------CHHHHHHHHHHHHTTTCSEEECCSCT--TCHHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHHhCCCCeEEEECCCCC---------CHHHHHHHHHHHHhcCCCEEeCCCCh--hhHHHHHHHHhhCCCCEE
Confidence 35556666644 4565554333221 233443333 34455554332221 12334444433 356666
Q ss_pred EeccCCC-HHHHHHHHHhcCccEEEeCC
Q 040734 301 TYGRLNN-VAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 301 ~w~Tvn~-~~~~~~~~~~~GVdgI~TD~ 327 (361)
+-..+.+ ..++++++..-.+|.|.-|-
T Consensus 256 ~dE~~~~~~~~~~~~i~~~~~d~v~ik~ 283 (382)
T 1rvk_A 256 GPESAAGKHWHRAEWIKAGACDILRTGV 283 (382)
T ss_dssp ECSSCSSHHHHHHHHHHTTCCSEEEECH
T ss_pred EeCCccCcHHHHHHHHHcCCCCEEeeCc
Confidence 6545566 66676665433477777654
No 303
>1twi_A Diaminopimelate decarboxylase; antibiotic resistance, lysine biosynthesis, structural genomics, NYSGXRC, PSI; HET: LYS PLP; 2.00A {Methanocaldococcus jannaschii} SCOP: b.49.2.3 c.1.6.1 PDB: 1tuf_A*
Probab=22.27 E-value=4.6e+02 Score=24.37 Aligned_cols=49 Identities=18% Similarity=0.168 Sum_probs=28.0
Q ss_pred ChHHHHHHHHcCC---EEEEeccCCCHHHHHHHHHhcCccEEEeCChHHHHHH
Q 040734 285 NPGAVTKIKESKL---SLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEITEA 334 (361)
Q Consensus 285 ~~~~v~~~~~~Gl---~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~~ 334 (361)
+..-+..++++|+ +++..+...++++++.++ ..|+..+..|....+.++
T Consensus 91 s~~E~~~~~~~G~~~~~I~~~g~~k~~~~i~~a~-~~~i~~~~vds~~el~~l 142 (434)
T 1twi_A 91 SGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGI-EANIRAFNVDSISELILI 142 (434)
T ss_dssp SHHHHHHHHHTTCCGGGEEECCSSCCHHHHHHHH-HTTCSEEEECSHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCcEEEECCCCCHHHHHHHH-HCCCCEEEECCHHHHHHH
Confidence 3444566666665 355553334556666664 467655666776666544
No 304
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A*
Probab=22.15 E-value=2.4e+02 Score=24.80 Aligned_cols=66 Identities=11% Similarity=0.085 Sum_probs=37.2
Q ss_pred ccCHHHHHHhCCC-CceEEEEEecCCccchhhhHHHHHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHC
Q 040734 166 LCTLQEAFQQVDP-NVGFNVELKFDDHIVYEQDYLIRVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQ 236 (361)
Q Consensus 166 iptL~EvL~~~~~-~~~l~iEiK~~~~~~~~~~~~~~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~ 236 (361)
.-.+++-|+.+.- .+-+++ +=.++... .......+. ++.+++.|.-+.+=++.|+...++.+.+..
T Consensus 87 ~~~~~~SL~rLg~dyiDl~l-lH~p~~~~---~~~~e~~~a-l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 153 (278)
T 1hw6_A 87 AAAIAESLAKLALDQVDLYL-VHWPTPAA---DNYVHAWEK-MIELRAAGLTRSIGVSNHLVPHLERIVAAT 153 (278)
T ss_dssp HHHHHHHHHHHTCSCEEEEE-ECCCCTTC---SSHHHHHHH-HHHHHHTTSEEEEEEESCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEE-EcCCCCCC---CCHHHHHHH-HHHHHHcCCccEEEecCCCHHHHHHHHHhc
Confidence 4567777777763 233322 22232210 011234444 344556677777889999999888887754
No 305
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=22.08 E-value=2.5e+02 Score=25.20 Aligned_cols=63 Identities=13% Similarity=0.165 Sum_probs=35.3
Q ss_pred cCHHHHHHhCCC-CceEEEEEecCCccchhhhHHHHHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHC
Q 040734 167 CTLQEAFQQVDP-NVGFNVELKFDDHIVYEQDYLIRVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQ 236 (361)
Q Consensus 167 ptL~EvL~~~~~-~~~l~iEiK~~~~~~~~~~~~~~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~ 236 (361)
-.+++-|+.+.- .+-+++ +=.++... .....+. ++.+++.|.-+.+=++.|+...++.+.+..
T Consensus 126 ~~~e~SL~rLg~dyiDl~~-lH~p~~~~-----~~e~~~a-l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 189 (310)
T 3b3e_A 126 AAFEKSLERLQLDYLDLYL-IHWPGKDK-----YKDTWRA-LEKLYKDGKIRAIGVSNFQVHHLEELLKDA 189 (310)
T ss_dssp HHHHHHHHHHTCSCEEEEE-ESCCCSSC-----HHHHHHH-HHHHHHTTSEEEEEEESCCHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCeeEEEE-eeCCCccc-----HHHHHHH-HHHHHHcCCcceEeecCCCHHHHHHHHHhc
Confidence 356666777663 232222 22232211 1233444 344555676677889999999888887654
No 306
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=22.01 E-value=1.6e+02 Score=26.77 Aligned_cols=62 Identities=13% Similarity=0.115 Sum_probs=39.6
Q ss_pred HHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEeCC--hHHHHHHHHHhcCCcccccccCccc
Q 040734 287 GAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL--VQEITEAVYDMIKPAKVVEKEDNKS 352 (361)
Q Consensus 287 ~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~--p~~~~~~l~~~~~~~~~~~~~~~~~ 352 (361)
+.++.+++. +.++-+= +++.++..+.+ ..|+|+|+-|. |+.+++.++.. .+....+.+++..
T Consensus 198 ~Av~~~r~~~p~~~ieVE--vdtlde~~eAl-~aGaD~I~LDn~~~~~l~~av~~i-~~~v~ieaSGGI~ 263 (298)
T 3gnn_A 198 EALDAAFALNAEVPVQIE--VETLDQLRTAL-AHGARSVLLDNFTLDMMRDAVRVT-EGRAVLEVSGGVN 263 (298)
T ss_dssp HHHHHHHHHC--CCCEEE--ESSHHHHHHHH-HTTCEEEEEESCCHHHHHHHHHHH-TTSEEEEEESSCS
T ss_pred HHHHHHHHhCCCCCEEEE--eCCHHHHHHHH-HcCCCEEEECCCCHHHHHHHHHHh-CCCCeEEEEcCCC
Confidence 556667665 3444443 57778888887 59999999886 56666666654 3444455555543
No 307
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=21.97 E-value=4.5e+02 Score=23.91 Aligned_cols=83 Identities=17% Similarity=0.176 Sum_probs=54.0
Q ss_pred HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHH---cCCEEEEe
Q 040734 226 PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKE---SKLSLLTY 302 (361)
Q Consensus 226 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~---~Gl~v~~w 302 (361)
..+++.+++..|..++..... +++++.+. ...|+++|-++.- +++.++.+.+ ....+.+=
T Consensus 219 ~~Av~~ar~~~p~~kIeVEVd------------tldea~eA-l~aGaD~I~LDn~----~~~~l~~av~~l~~~v~ieaS 281 (320)
T 3paj_A 219 RQAISTAKQLNPGKPVEVETE------------TLAELEEA-ISAGADIIMLDNF----SLEMMREAVKINAGRAALENS 281 (320)
T ss_dssp HHHHHHHHHHSTTSCEEEEES------------SHHHHHHH-HHTTCSEEEEESC----CHHHHHHHHHHHTTSSEEEEE
T ss_pred HHHHHHHHHhCCCCeEEEEEC------------CHHHHHHH-HHcCCCEEEECCC----CHHHHHHHHHHhCCCCeEEEE
Confidence 367778888888877665543 35554443 3578888877642 5555555543 24677777
Q ss_pred ccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 303 GRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 303 ~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
|-+| ++.+..+. ..|||+|.+-.
T Consensus 282 GGIt-~~~I~~~a-~tGVD~isvGa 304 (320)
T 3paj_A 282 GNIT-LDNLKECA-ETGVDYISVGA 304 (320)
T ss_dssp SSCC-HHHHHHHH-TTTCSEEECTH
T ss_pred CCCC-HHHHHHHH-HcCCCEEEECc
Confidence 6565 55666665 69999998754
No 308
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=21.89 E-value=1.6e+02 Score=21.96 Aligned_cols=48 Identities=15% Similarity=0.134 Sum_probs=26.5
Q ss_pred HHHHHHHH-cCCEEEEeccCC-CHHHHHHHHHhcCccEEEeC--ChHHHHHHHH
Q 040734 287 GAVTKIKE-SKLSLLTYGRLN-NVAEAVYMQHLMGIDGVIVD--LVQEITEAVY 336 (361)
Q Consensus 287 ~~v~~~~~-~Gl~v~~w~Tvn-~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~ 336 (361)
++++.+++ ..+++++. |-. +.....+++ ..|+++++.= .+..+.+.++
T Consensus 68 ~~~~~l~~~~~~~ii~l-s~~~~~~~~~~~~-~~g~~~~l~KP~~~~~l~~~i~ 119 (140)
T 3h5i_A 68 QTALAIQQISELPVVFL-TAHTEPAVVEKIR-SVTAYGYVMKSATEQVLITIVE 119 (140)
T ss_dssp HHHHHHHHHCCCCEEEE-ESSSSCCCCGGGG-GSCEEEEEETTCCHHHHHHHHH
T ss_pred HHHHHHHhCCCCCEEEE-ECCCCHHHHHHHH-hCCCcEEEeCCCCHHHHHHHHH
Confidence 55555554 35677776 433 333334444 5899998863 3444444443
No 309
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=21.87 E-value=1.6e+02 Score=25.17 Aligned_cols=103 Identities=9% Similarity=0.010 Sum_probs=56.7
Q ss_pred EcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCC-hHHHHHHHHcCCEEE
Q 040734 222 STFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRN-PGAVTKIKESKLSLL 300 (361)
Q Consensus 222 ~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~-~~~v~~~~~~Gl~v~ 300 (361)
.++.++.++++++.. ++++++-... .|+. ++...+.+.+.++ ++.+.++... - .+.++.+ +.|..|.
T Consensus 35 ~~~G~~~v~~L~~~~-g~~VflDlK~-----~DIp-nTv~~a~~~~~~~-ad~vTvh~~~---G~~~~~~~~-~~~~~v~ 102 (215)
T 3ve9_A 35 LNLGKEKVKELVGLV-DGIKILDLKL-----ADID-NTMILIVDELKDI-TNSFIAHAFV---GVEGSLASL-SQRVDLF 102 (215)
T ss_dssp HHHCHHHHHHHHTTC-CSEEEEEEEE-----CSCH-HHHHHHHHHHTTT-CSEEEEEGGG---CTTTTHHHH-HHHSEEE
T ss_pred HhhCHHHHHHHHHhc-CCcEEEEecc-----cCch-hHHHHHHHHHHHh-hheEEEeCCC---CcHHHHHhH-hcCCCEE
Confidence 356788888888742 5666543322 1221 2233334445566 7777665421 3 4455555 4455666
Q ss_pred EeccCCCH--------HHHHHHHHhcCccEEEeCC--hHHHHHHHHH
Q 040734 301 TYGRLNNV--------AEAVYMQHLMGIDGVIVDL--VQEITEAVYD 337 (361)
Q Consensus 301 ~w~Tvn~~--------~~~~~~~~~~GVdgI~TD~--p~~~~~~l~~ 337 (361)
+- |-.+. ....++...+|+||+++-- |..+...++.
T Consensus 103 vL-ts~s~~~~~~~~v~~~a~~a~~~G~~GvV~sat~~~e~~~ir~~ 148 (215)
T 3ve9_A 103 LV-LSMSHPGWNDAFYPYLREVARRVNPKGFVAPATRPSMISRVKGD 148 (215)
T ss_dssp EE-CCCSSTTCCGGGHHHHHHHHHHHCCSEEECCTTSHHHHHHHHHH
T ss_pred EE-EecCCcchHHHHHHHHHHHHHHcCCCceeeCCCCHHHHHHHHHh
Confidence 65 33222 2233444468999999864 7777665554
No 310
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=21.86 E-value=2.7e+02 Score=25.20 Aligned_cols=35 Identities=11% Similarity=0.022 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHC
Q 040734 201 RVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQ 236 (361)
Q Consensus 201 ~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~ 236 (361)
...+.+ +.+++.|.-+.+=++.|+...++.+.+..
T Consensus 156 e~~~al-~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 190 (334)
T 3krb_A 156 DTWRAM-EQLVEEGLVKHIGVSNYTVPLLADLLNYA 190 (334)
T ss_dssp HHHHHH-HHHHHHTSEEEEEEESCCHHHHHHHHHHC
T ss_pred HHHHHH-HHHHHcCCccEEEEecCCHHHHHHHHHhC
Confidence 444444 44455677677889999999988887764
No 311
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=21.86 E-value=1.1e+02 Score=27.52 Aligned_cols=40 Identities=8% Similarity=-0.133 Sum_probs=30.7
Q ss_pred ChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEe
Q 040734 285 NPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIV 325 (361)
Q Consensus 285 ~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T 325 (361)
..++++.++++|+++++- |-+........+..+|++.++.
T Consensus 184 ~~e~L~~Lk~~G~~v~Iv-Sn~~~~~~~~~l~~lgl~~~f~ 223 (317)
T 4eze_A 184 LLTILPVIKAKGFKTAII-SGGLDIFTQRLKARYQLDYAFS 223 (317)
T ss_dssp HHHHHHHHHHTTCEEEEE-EEEEHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHhCCCEEEEE-eCccHHHHHHHHHHcCCCeEEE
Confidence 358899999999999988 6555555666666689887765
No 312
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=21.85 E-value=3.2e+02 Score=23.55 Aligned_cols=62 Identities=15% Similarity=0.125 Sum_probs=43.6
Q ss_pred HHHHHHHHHhcCCcEEEcCCccccCChHHHHHHH-HcCCEEEEeccCCC--HHH----HHHHHHhcCccEEEe
Q 040734 260 LEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIK-ESKLSLLTYGRLNN--VAE----AVYMQHLMGIDGVIV 325 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~-~~Gl~v~~w~Tvn~--~~~----~~~~~~~~GVdgI~T 325 (361)
+.++.+.+...|++.+.+.+. ...+.++.+. ..+++|++-|.++. .++ +..++ ..|++||..
T Consensus 168 ~~~~a~~a~~~Gad~i~~~~~---~~~~~l~~i~~~~~ipvva~GGi~~~~~~~~~~~~~~~~-~~Ga~gv~v 236 (273)
T 2qjg_A 168 VAHAARLGAELGADIVKTSYT---GDIDSFRDVVKGCPAPVVVAGGPKTNTDEEFLQMIKDAM-EAGAAGVAV 236 (273)
T ss_dssp HHHHHHHHHHTTCSEEEECCC---SSHHHHHHHHHHCSSCEEEECCSCCSSHHHHHHHHHHHH-HHTCSEEEC
T ss_pred HHHHHHHHHHcCCCEEEECCC---CCHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHH-HcCCcEEEe
Confidence 455557788899998877653 3667777776 45789988877874 555 44443 589999975
No 313
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=21.65 E-value=2.9e+02 Score=25.35 Aligned_cols=9 Identities=11% Similarity=-0.293 Sum_probs=4.8
Q ss_pred hcCccEEEe
Q 040734 317 LMGIDGVIV 325 (361)
Q Consensus 317 ~~GVdgI~T 325 (361)
..|+..++.
T Consensus 286 ~~g~~~~~~ 294 (379)
T 2rdx_A 286 DNRMPVVAE 294 (379)
T ss_dssp HTTCCEEEE
T ss_pred HcCCeEEEe
Confidence 455555554
No 314
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=21.53 E-value=1.2e+02 Score=26.80 Aligned_cols=43 Identities=16% Similarity=0.162 Sum_probs=35.8
Q ss_pred ChHHHHHHHHc-----CCEEEEeccCCCHHHHHHHHHhc--CccEEEeCCh
Q 040734 285 NPGAVTKIKES-----KLSLLTYGRLNNVAEAVYMQHLM--GIDGVIVDLV 328 (361)
Q Consensus 285 ~~~~v~~~~~~-----Gl~v~~w~Tvn~~~~~~~~~~~~--GVdgI~TD~p 328 (361)
+-++++.+.+. +++|++-|-+.+.+++.+++ .+ |+++++....
T Consensus 189 d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~-~~~~G~~gvivg~a 238 (260)
T 2agk_A 189 DELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVD-ELSHGKVDLTFGSS 238 (260)
T ss_dssp CHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHH-HHHTTCEEEECCTT
T ss_pred CHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHH-HhcCCCCEEEeeCC
Confidence 45777877664 89999988899999999987 46 9999998776
No 315
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=21.47 E-value=1.3e+02 Score=25.15 Aligned_cols=66 Identities=18% Similarity=0.192 Sum_probs=38.5
Q ss_pred cCCHHHHHHHHHHCCCCCEE--EEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEE
Q 040734 223 TFQPDAAVLIRKLQSTYPVF--FLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLL 300 (361)
Q Consensus 223 Sf~~~~l~~l~~~~p~~~~~--~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~ 300 (361)
++.++.++.+++.. +.++. +..... .+.++.+...|+++++++....-.....++.+++.|+.+.
T Consensus 47 ~~g~~~i~~i~~~~-~~~~~v~l~v~d~------------~~~i~~~~~~gad~v~vh~~~~~~~~~~~~~~~~~g~~i~ 113 (220)
T 2fli_A 47 SFGADVVASMRKHS-KLVFDCHLMVVDP------------ERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAG 113 (220)
T ss_dssp CBCHHHHHHHHTTC-CSEEEEEEESSSG------------GGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTSEEE
T ss_pred ccCHHHHHHHHHhC-CCCEEEEEeecCH------------HHHHHHHHHcCCCEEEEccCccccHHHHHHHHHHcCCcEE
Confidence 45678888887764 33332 222211 1123556678999987665432123467788888898764
Q ss_pred E
Q 040734 301 T 301 (361)
Q Consensus 301 ~ 301 (361)
+
T Consensus 114 ~ 114 (220)
T 2fli_A 114 V 114 (220)
T ss_dssp E
T ss_pred E
Confidence 4
No 316
>3v1h_A 1-phosphatidylinositol phosphodiesterase; PI-cation, TIM barrel, phospholipase, lyase; HET: INS; 1.90A {Staphylococcus aureus subsp} PDB: 4f2b_A* 4f2u_A* 4f2t_A 3v18_A 3v16_A*
Probab=21.46 E-value=74 Score=29.02 Aligned_cols=31 Identities=13% Similarity=0.240 Sum_probs=26.8
Q ss_pred HHHHHHhCCCCEEEEeeeeecCCcEEEEcCC
Q 040734 77 SFNSSAKYPLDFIEFDVQVTKDGWPVIFHDD 107 (361)
Q Consensus 77 Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~ 107 (361)
.+..=++.|+.+++++|+..+|+.+.++|..
T Consensus 50 si~~QL~~GVR~lDlRv~~~~~~~l~~~Hg~ 80 (306)
T 3v1h_A 50 DYLTQMKSGVRFFDIRGRASADNMISVHHGM 80 (306)
T ss_dssp CHHHHHHTTCCEEEEEEEEEETTEEEEEETT
T ss_pred CHHHHHHhCcceEEEEeeecCCCcEEEEccC
Confidence 3556678899999999999999999999964
No 317
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1
Probab=21.30 E-value=2.9e+02 Score=24.62 Aligned_cols=62 Identities=11% Similarity=0.131 Sum_probs=36.0
Q ss_pred cCHHHHHHhCCC-CceEEEEEecCCccchhhhHHHHHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHC
Q 040734 167 CTLQEAFQQVDP-NVGFNVELKFDDHIVYEQDYLIRVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQ 236 (361)
Q Consensus 167 ptL~EvL~~~~~-~~~l~iEiK~~~~~~~~~~~~~~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~ 236 (361)
-.+++-|+.+.- .+-+++ +=.+.. + .....+. ++.+++.|.-+.+=++.|+.+.++.+.+..
T Consensus 104 ~~~~~SL~rLg~dyiDl~l-lH~p~~-~-----~~e~~~a-l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 166 (298)
T 1vp5_A 104 KAFEKSLKKLQLEYIDLYL-IHQPFG-D-----VHCAWKA-MEEMYKDGLVRAIGVSNFYPDRLMDLMVHH 166 (298)
T ss_dssp HHHHHHHHHHTCSCEEEEE-ECSSCS-C-----HHHHHHH-HHHHHHTTSEEEEEEESCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCcEEEEE-ecCCCC-C-----HHHHHHH-HHHHHHcCCccEEEecCCCHHHHHHHHHhC
Confidence 456777777763 233322 222221 1 1234444 344555676677889999999888887764
No 318
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Probab=21.25 E-value=2.3e+02 Score=25.53 Aligned_cols=34 Identities=15% Similarity=0.094 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHH
Q 040734 201 RVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKL 235 (361)
Q Consensus 201 ~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~ 235 (361)
...+. ++.+++.|.-+.+=++.|+...++.+.+.
T Consensus 149 e~~~a-le~l~~~Gkir~iGvSn~~~~~l~~~~~~ 182 (326)
T 3buv_A 149 ATWEA-MEACKDAGLVKSLGVSNFNRRQLELILNK 182 (326)
T ss_dssp HHHHH-HHHHHHTTSEEEEEEESCCHHHHHHHHTC
T ss_pred HHHHH-HHHHHHcCCccEEEEeCCCHHHHHHHHHh
Confidence 34444 44455667777788999999988888764
No 319
>3hv8_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; HET: C2E; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 3hv9_A 4afy_A 4ag0_A
Probab=21.21 E-value=1.1e+02 Score=26.53 Aligned_cols=38 Identities=8% Similarity=0.055 Sum_probs=31.9
Q ss_pred hHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEe
Q 040734 286 PGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIV 325 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T 325 (361)
..++..+|+.|+.|++= -|.+.+++..+. .+|||.+.=
T Consensus 212 ~~ii~~~~~~~~~viae-GVEt~~~~~~l~-~lG~~~~QG 249 (268)
T 3hv8_A 212 KGLIAELHEQQKLSIVP-FVESASVLATLW-QAGATYIQG 249 (268)
T ss_dssp HHHHHHHHHTTCEEEEC-CCCSHHHHHHHH-HHTCSEECS
T ss_pred HHHHHHHHHcCCCEEEE-eeCCHHHHHHHH-HcCCCEecc
Confidence 36778899999999998 599999998885 799997653
No 320
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=21.02 E-value=2.6e+02 Score=22.28 Aligned_cols=16 Identities=13% Similarity=0.034 Sum_probs=7.6
Q ss_pred HHHHHHHHcCCEEEEe
Q 040734 287 GAVTKIKESKLSLLTY 302 (361)
Q Consensus 287 ~~v~~~~~~Gl~v~~w 302 (361)
++++.++++|+++++.
T Consensus 77 ~~l~~l~~~g~~~~i~ 92 (205)
T 3m9l_A 77 ELVRELAGRGYRLGIL 92 (205)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHhcCCeEEEE
Confidence 4444444444444444
No 321
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=20.97 E-value=3.4e+02 Score=22.81 Aligned_cols=62 Identities=15% Similarity=0.120 Sum_probs=40.8
Q ss_pred cHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEE-EeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 259 SLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLL-TYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 259 ~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~-~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
+.++..+.+...+++.+.++-.. ++++++.++ .|++++ +. .+.+..++ .+. ...+|+++-|.
T Consensus 63 ~~~~i~~~~~~~~ld~vQLHG~e---~~~~~~~l~-~~~~vika~-~v~~~~~l-~~~-~~~~d~~LlD~ 125 (203)
T 1v5x_A 63 PPEEVLRLMEEARLQVAQLHGEE---PPEWAEAVG-RFYPVIKAF-PLEGPARP-EWA-DYPAQALLLDG 125 (203)
T ss_dssp CHHHHHHHHHHTTCSEEEECSCC---CHHHHHHHT-TTSCEEEEE-ECSSSCCG-GGG-GSSCSEEEEEC
T ss_pred CHHHHHHHHHhhCCCEEEECCCC---CHHHHHHhc-cCCCEEEEE-EcCChHhh-hhh-hcCCCEEEEcC
Confidence 46677788888889998887653 788888873 355553 45 45554444 332 34488888775
No 322
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=20.87 E-value=1.5e+02 Score=26.68 Aligned_cols=112 Identities=21% Similarity=0.240 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEcC--------CHHHH----HHHHH-HCCCCCEEEEccCCCccccccccccHHHHHHHH
Q 040734 201 RVIQAILKIVFEFAENRPIIFSTF--------QPDAA----VLIRK-LQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVC 267 (361)
Q Consensus 201 ~~v~~vl~~l~~~~~~~rv~~~Sf--------~~~~l----~~l~~-~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~ 267 (361)
..++.+++..++.+ .+++++.. ....+ +.+.+ ....+|+++=.+-+. +++ .+..+
T Consensus 32 e~~~avi~AAee~~--sPvIlq~s~~~~~~~~g~~~~~~~v~~~A~~~~~~VPValHlDHg~---------~~e-~i~~a 99 (288)
T 3q94_A 32 EWTQAILAAAEEEK--SPVILGVSEGAARHMTGFKTVVAMVKALIEEMNITVPVAIHLDHGS---------SFE-KCKEA 99 (288)
T ss_dssp HHHHHHHHHHHHTT--CCEEEEEEHHHHHHTSCHHHHHHHHHHHHHHTTCCSCEEEEEEEEC---------SHH-HHHHH
T ss_pred HHHHHHHHHHHHhC--CCEEEECChhhhhhcCCHHHHHHHHHHHHHhcCCCCcEEEECCCCC---------CHH-HHHHH
Confidence 35666666665553 45666532 22222 22222 256788876544321 233 34455
Q ss_pred HhcCCcEEEcCCccc------cCChHHHHHHHHcCCEEEE-----ecc----------CCCHHHHHHHHHhcCccEEE
Q 040734 268 LEGGLQGIVSEVKGV------FRNPGAVTKIKESKLSLLT-----YGR----------LNNVAEAVYMQHLMGIDGVI 324 (361)
Q Consensus 268 ~~~~~~~i~~~~~~~------~~~~~~v~~~~~~Gl~v~~-----w~T----------vn~~~~~~~~~~~~GVdgI~ 324 (361)
.+.|+..+-++.+.+ -.+.++++.+|+.|+.|=+ -|. .-+|++..++....|||.+-
T Consensus 100 i~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~LA 177 (288)
T 3q94_A 100 IDAGFTSVMIDASHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEATGIDCLA 177 (288)
T ss_dssp HHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSEEE
T ss_pred HHcCCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCCccccCCCHHHHHHHHHHHCCCEEE
Confidence 678898888777653 2467999999999988832 111 13678888887668888654
No 323
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A*
Probab=20.76 E-value=2.9e+02 Score=25.23 Aligned_cols=35 Identities=6% Similarity=-0.020 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHC
Q 040734 201 RVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQ 236 (361)
Q Consensus 201 ~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~ 236 (361)
...+.+ +.+++.|.-+.+=++.|+...++.+.+..
T Consensus 170 e~~~aL-e~l~~~GkIr~iGvSn~~~~~l~~~~~~~ 204 (344)
T 2bgs_A 170 GVWKEM-ENLVKDGLVKDIGVCNYTVTKLNRLLRSA 204 (344)
T ss_dssp HHHHHH-HHHHHTTSEEEEEEESCCHHHHHHHHHHC
T ss_pred HHHHHH-HHHHHcCCccEEEEecCCHHHHHHHHHhc
Confidence 344443 44556677777889999999888887764
No 324
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=20.75 E-value=2.5e+02 Score=27.10 Aligned_cols=59 Identities=15% Similarity=0.155 Sum_probs=42.3
Q ss_pred HHHHhcCCcEEEcCCccc--cCChHHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEe
Q 040734 265 KVCLEGGLQGIVSEVKGV--FRNPGAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIV 325 (361)
Q Consensus 265 ~~~~~~~~~~i~~~~~~~--~~~~~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T 325 (361)
+.+...|++.+.++...- ....+.++.+++. ++.|.+- ++.+.++++.+. +.|+|+|..
T Consensus 235 ~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g-~v~t~e~a~~l~-~aGaD~I~v 297 (490)
T 4avf_A 235 AALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGG-NIATAEAAKALA-EAGADAVKV 297 (490)
T ss_dssp HHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEE-EECSHHHHHHHH-HTTCSEEEE
T ss_pred HHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEe-eeCcHHHHHHHH-HcCCCEEEE
Confidence 344466888887654321 0123788888876 6888886 788999998886 699999985
No 325
>4eqa_C PA1845 protein, putative uncharacterized protein; type VI secretion, T6S, antitoxin-toxin complex, unknown FUN; 1.60A {Pseudomonas aeruginosa} PDB: 4fgi_B
Probab=20.74 E-value=1.3e+02 Score=22.67 Aligned_cols=60 Identities=17% Similarity=0.137 Sum_probs=41.5
Q ss_pred cccchhhhhccC-CCCCCCCcceEEEecCCCCCCCCcchhhhcccccchHHHHHHHHhCCCCEEEEeeeeecCCcEEEEc
Q 040734 27 STSFSSCLEMNK-SASFRIPKFLVVGHRGHGMNVLQSSDKRMQAIKENSIASFNSSAKYPLDFIEFDVQVTKDGWPVIFH 105 (361)
Q Consensus 27 ~~~~~~~~~~~~-~~~~~~~~~~iiaHRG~~~~~~~~~~~~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~H 105 (361)
-+|||+---+.+ |..|.. .|...|.|-.+..+ . ++.|.-+-.--|.++.||.-|++|
T Consensus 28 rvmfsnedpnddnpdafpe-ppvyladrdsgndc----------r-----------iedggiwsrggvflsqdgrrvlmh 85 (153)
T 4eqa_C 28 RVMFSNEDPNDDNPDAFPE-PPVYLADRDSGNDC----------R-----------IEDGGIWSRGGVFLSQDGRRVLMH 85 (153)
T ss_dssp EEEEECCCTTCSSCSEECS-CCEEEEETTTCCEE----------E-----------ECSCCCEEEEEEEEETTSSEEEEE
T ss_pred EEEeccCCCCCCCcccCCC-CCeEeeccCCCCcc----------e-----------eecCcEeecCcEEEecCCceeeee
Confidence 467887644333 666643 45688999887631 1 345666777789999999999999
Q ss_pred CCC
Q 040734 106 DDV 108 (361)
Q Consensus 106 D~~ 108 (361)
...
T Consensus 86 efs 88 (153)
T 4eqa_C 86 EFS 88 (153)
T ss_dssp EEE
T ss_pred ecc
Confidence 653
No 326
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=20.71 E-value=3.1e+02 Score=21.48 Aligned_cols=33 Identities=9% Similarity=-0.055 Sum_probs=18.9
Q ss_pred hHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcC
Q 040734 286 PGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMG 319 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~G 319 (361)
.++++.++++|+++++. |-+........+..+|
T Consensus 95 ~~~l~~l~~~g~~~~i~-s~~~~~~~~~~l~~~~ 127 (214)
T 3e58_A 95 LKVLNEVKSQGLEIGLA-SSSVKADIFRALEENR 127 (214)
T ss_dssp HHHHHHHHHTTCEEEEE-ESSCHHHHHHHHHHTT
T ss_pred HHHHHHHHHCCCCEEEE-eCCcHHHHHHHHHHcC
Confidence 35666667777777666 5444444444444445
No 327
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=20.64 E-value=1.4e+02 Score=26.10 Aligned_cols=37 Identities=5% Similarity=0.046 Sum_probs=26.7
Q ss_pred hHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEE
Q 040734 286 PGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVI 324 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~ 324 (361)
...++.+++.|++|..+ .--++++++... ..|+|.|-
T Consensus 117 ~~~i~~L~~~GIrVSLF-IDpd~~qi~aA~-~~GA~~IE 153 (243)
T 1m5w_A 117 RDACKRLADAGIQVSLF-IDADEEQIKAAA-EVGAPFIE 153 (243)
T ss_dssp HHHHHHHHHTTCEEEEE-ECSCHHHHHHHH-HTTCSEEE
T ss_pred HHHHHHHHHCCCEEEEE-eCCCHHHHHHHH-HhCcCEEE
Confidence 47788889999988888 444566665554 68888774
No 328
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=20.63 E-value=5.6e+02 Score=24.42 Aligned_cols=72 Identities=8% Similarity=-0.011 Sum_probs=45.3
Q ss_pred HHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHh--------cCccEEEeCChHHHHHHHH
Q 040734 265 KVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHL--------MGIDGVIVDLVQEITEAVY 336 (361)
Q Consensus 265 ~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~--------~GVdgI~TD~p~~~~~~l~ 336 (361)
+.....|+......-+.+.........+.+.|+.|++| --.+.+++.+++.. .+.+.|+-|--+...-+..
T Consensus 61 ~tL~~~GA~v~~~~~n~~stqd~~aaal~~~gi~v~a~-~ge~~~ey~~~~~~~l~~~~~~~~p~~ilDdGgdl~~~~h~ 139 (436)
T 3h9u_A 61 ETLVELGAEVRWASCNIFSTQDHAAAAIAKRGIPVFAW-KGETEEEYMWCMKQTLKGFSGDGYPNMLLDDGGDLTNYVLD 139 (436)
T ss_dssp HHHHHTTCEEEEECSSTTTCCHHHHHHHHHTTCCEEEC-TTCCHHHHHHHHHHTTSCBTTTBCCSEEEESSSHHHHHHHH
T ss_pred HHHHHcCCEEEEecCCCCCCcHHHHHHHHhcCCeEEEe-CCCCHHHHHHHHHHHHHhcccCCCCceEeccccHHHHHHHH
Confidence 44556776544333232222456666778899999999 67777787666532 2577788777766654444
Q ss_pred H
Q 040734 337 D 337 (361)
Q Consensus 337 ~ 337 (361)
+
T Consensus 140 ~ 140 (436)
T 3h9u_A 140 E 140 (436)
T ss_dssp H
T ss_pred H
Confidence 3
No 329
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=20.57 E-value=2.4e+02 Score=20.07 Aligned_cols=50 Identities=8% Similarity=0.004 Sum_probs=30.0
Q ss_pred HHHHHHHHc----CCEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHHHHHh
Q 040734 287 GAVTKIKES----KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEAVYDM 338 (361)
Q Consensus 287 ~~v~~~~~~----Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~~~ 338 (361)
++++.+++. ..++.+. .-.+.....+.+ ..|++++++- .+..+.+.++..
T Consensus 67 ~~~~~l~~~~~~~~~~ii~~-~~~~~~~~~~~~-~~g~~~~l~kp~~~~~l~~~i~~~ 122 (127)
T 2gkg_A 67 LICGKLKKDDDLKNVPIVII-GNPDGFAQHRKL-KAHADEYVAKPVDADQLVERAGAL 122 (127)
T ss_dssp HHHHHHHHSTTTTTSCEEEE-ECGGGHHHHHHS-TTCCSEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHhcCccccCCCEEEE-ecCCchhHHHHH-HhCcchheeCCCCHHHHHHHHHHH
Confidence 566777664 4566555 444455555554 5899988864 345555555543
No 330
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=20.55 E-value=3.6e+02 Score=22.24 Aligned_cols=74 Identities=9% Similarity=0.015 Sum_probs=40.7
Q ss_pred HHHHhcCCcEEEcCCccccC-ChHHHHHHHHc-CCEEEEeccCCCHHHHHHHHHhcCccEEEe--CChHHHHHHHHHhc
Q 040734 265 KVCLEGGLQGIVSEVKGVFR-NPGAVTKIKES-KLSLLTYGRLNNVAEAVYMQHLMGIDGVIV--DLVQEITEAVYDMI 339 (361)
Q Consensus 265 ~~~~~~~~~~i~~~~~~~~~-~~~~v~~~~~~-Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T--D~p~~~~~~l~~~~ 339 (361)
..+....++.+.++....-. .-++++.+++. +.++.+.+.-.+......++ ..|++++++ -.+..+.+.++...
T Consensus 43 ~~l~~~~~dlvilD~~l~~~~g~~~~~~lr~~~~~~ii~lt~~~~~~~~~~~~-~~Ga~~~l~Kp~~~~~L~~~i~~~~ 120 (238)
T 2gwr_A 43 TAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGL-ESGADDYIMKPFKPKELVARVRARL 120 (238)
T ss_dssp HHHHHHCCSEEEEESSCSSSCHHHHHHHHHTTCCCCEEEEEETTCCSCHHHHH-HTTCCEEEEESCCHHHHHHHHHHHC
T ss_pred HHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEEeCCCCHHHHHHHH-HCCCCEEEeCCCCHHHHHHHHHHHH
Confidence 33334445555554432111 12566666654 56777772233444455565 589999886 35666777666543
No 331
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=20.38 E-value=4.2e+02 Score=24.14 Aligned_cols=15 Identities=7% Similarity=-0.028 Sum_probs=8.6
Q ss_pred HHHHhcCccEEEeCC
Q 040734 313 YMQHLMGIDGVIVDL 327 (361)
Q Consensus 313 ~~~~~~GVdgI~TD~ 327 (361)
.+....|+.-++...
T Consensus 284 ~~A~~~g~~~~~~~~ 298 (371)
T 2ps2_A 284 DICLAAGYSVSVQET 298 (371)
T ss_dssp HHHHHHTCEEEEECS
T ss_pred HHHHHcCCeEEecCC
Confidence 344456777666553
No 332
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=20.37 E-value=2.6e+02 Score=20.53 Aligned_cols=70 Identities=6% Similarity=-0.051 Sum_probs=41.9
Q ss_pred cCCcEEEcCCccccC-ChHHHHHHHH------cCCEEEEeccCCCHHHHHHHHHhcC-ccEEEeC--ChHHHHHHHHHhc
Q 040734 270 GGLQGIVSEVKGVFR-NPGAVTKIKE------SKLSLLTYGRLNNVAEAVYMQHLMG-IDGVIVD--LVQEITEAVYDMI 339 (361)
Q Consensus 270 ~~~~~i~~~~~~~~~-~~~~v~~~~~------~Gl~v~~w~Tvn~~~~~~~~~~~~G-VdgI~TD--~p~~~~~~l~~~~ 339 (361)
..++.+.++...--. .-++++.+++ ....+++.+.-.+.....+.+ ..| ++++++= .+..+.+.+++..
T Consensus 59 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~~~ii~~t~~~~~~~~~~~~-~~g~~~~~l~KP~~~~~L~~~i~~~~ 137 (146)
T 3ilh_A 59 RWPSIICIDINMPGINGWELIDLFKQHFQPMKNKSIVCLLSSSLDPRDQAKAE-ASDWVDYYVSKPLTANALNNLYNKVL 137 (146)
T ss_dssp CCCSEEEEESSCSSSCHHHHHHHHHHHCGGGTTTCEEEEECSSCCHHHHHHHH-HCSSCCEEECSSCCHHHHHHHHHHHH
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHHhhhhccCCCeEEEEeCCCChHHHHHHH-hcCCcceeeeCCCCHHHHHHHHHHHH
Confidence 445555555432111 1367777776 457787773344555566665 588 9999873 4666777776654
Q ss_pred C
Q 040734 340 K 340 (361)
Q Consensus 340 ~ 340 (361)
.
T Consensus 138 ~ 138 (146)
T 3ilh_A 138 N 138 (146)
T ss_dssp C
T ss_pred H
Confidence 4
No 333
>3c3w_A Two component transcriptional regulatory protein; response regulator, two-component regulatory system, DNA-BIN protein; 2.20A {Mycobacterium tuberculosis}
Probab=20.35 E-value=2.6e+02 Score=23.00 Aligned_cols=37 Identities=16% Similarity=0.153 Sum_probs=21.0
Q ss_pred HHHHHHHHc--CCEEEEeccCC-CHHHHHHHHHhcCccEEEe
Q 040734 287 GAVTKIKES--KLSLLTYGRLN-NVAEAVYMQHLMGIDGVIV 325 (361)
Q Consensus 287 ~~v~~~~~~--Gl~v~~w~Tvn-~~~~~~~~~~~~GVdgI~T 325 (361)
++++.+++. +.++.+. |.. +.......+ ..|++++++
T Consensus 64 ~~~~~lr~~~~~~~ii~l-t~~~~~~~~~~~~-~~Ga~~~l~ 103 (225)
T 3c3w_A 64 ELCRDLLSRMPDLRCLIL-TSYTSDEAMLDAI-LAGASGYVV 103 (225)
T ss_dssp HHHHHHHHHCTTCEEEEG-GGSSSHHHHHHHH-HHTCCCHHH
T ss_pred HHHHHHHHhCCCCcEEEE-ECCCCHHHHHHHH-HCCCCEEEE
Confidence 455555553 4677777 443 344444554 477777664
No 334
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=20.26 E-value=1.3e+02 Score=31.21 Aligned_cols=47 Identities=15% Similarity=0.129 Sum_probs=36.3
Q ss_pred HHHHHHHHcCCEEEEeccC--CCHHHHHHHHHhcCccEEEeCChHHHHHHH
Q 040734 287 GAVTKIKESKLSLLTYGRL--NNVAEAVYMQHLMGIDGVIVDLVQEITEAV 335 (361)
Q Consensus 287 ~~v~~~~~~Gl~v~~w~Tv--n~~~~~~~~~~~~GVdgI~TD~p~~~~~~l 335 (361)
..++.+|++|+.+.++|-. ++++....+. .+|+|++.. .|+.+....
T Consensus 737 ~~v~aar~~g~~vgicGe~~~~dp~~~~~~~-~~G~~~~s~-~p~~v~~~~ 785 (794)
T 2ols_A 737 LAISACRKQNKYVGICGQGPSDHPDFAKWLV-EEGIESVSL-NPDTVIETW 785 (794)
T ss_dssp HHHHHHHTTTCEEEEESSHHHHCHHHHHHHH-HHTCCEEEE-CGGGHHHHH
T ss_pred HHHHHHHHhCCEEEEecccCCCCHHHHHHHH-HCCCCEEEE-CHhHHHHHH
Confidence 4577889999999998545 5777776665 799999999 777665443
No 335
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A*
Probab=20.24 E-value=2.3e+02 Score=25.43 Aligned_cols=34 Identities=15% Similarity=0.033 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHH
Q 040734 201 RVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKL 235 (361)
Q Consensus 201 ~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~ 235 (361)
...+. ++.+++.|.-+.+=++.|+...++.+.+.
T Consensus 146 e~~~a-le~l~~~Gkir~iGvSn~~~~~l~~~~~~ 179 (323)
T 1afs_A 146 DTWEA-MEKCKDAGLAKSIGVSNFNCRQLERILNK 179 (323)
T ss_dssp HHHHH-HHHHHHTTSEEEEEEESCCHHHHHHHHTC
T ss_pred HHHHH-HHHHHHcCCcCEEEeeCCCHHHHHHHHHh
Confidence 34444 44455667777788999999988888764
Done!