Query 040734
Match_columns 361
No_of_seqs 173 out of 1185
Neff 8.0
Searched_HMMs 13730
Date Mon Mar 25 18:12:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040734.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/040734hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1zcca1 c.1.18.3 (A:1-240) Gly 100.0 7.2E-51 5.2E-55 370.6 25.1 233 47-338 2-235 (240)
2 d1o1za_ c.1.18.3 (A:) Hypothet 100.0 3.2E-48 2.3E-52 349.3 23.5 221 45-334 3-225 (226)
3 d1vd6a1 c.1.18.3 (A:8-224) Put 100.0 5.9E-46 4.3E-50 331.3 24.4 212 47-333 1-214 (217)
4 d1ydya1 c.1.18.3 (A:29-356) Gl 100.0 1.2E-43 8.5E-48 334.8 22.7 269 45-335 1-327 (328)
5 d1qasa3 c.1.18.1 (A:299-625) P 96.6 0.00052 3.8E-08 62.5 3.7 40 70-109 23-62 (327)
6 d2zkmx4 c.1.18.1 (X:312-660) P 96.1 0.0016 1.2E-07 59.6 3.8 39 71-109 27-67 (349)
7 d1vhca_ c.1.10.1 (A:) Hypothet 90.8 3.2 0.00023 34.0 14.0 143 168-341 3-151 (212)
8 d1a53a_ c.1.2.4 (A:) Indole-3- 85.3 4.1 0.0003 34.2 11.3 167 163-350 26-212 (247)
9 d1wbha1 c.1.10.1 (A:1-213) KDP 83.0 11 0.00077 30.7 15.4 141 167-341 6-152 (213)
10 d1vkfa_ c.1.29.1 (A:) Glycerol 82.7 1.6 0.00012 34.6 7.0 52 285-337 33-89 (172)
11 d1mxsa_ c.1.10.1 (A:) KDPG ald 81.9 3.6 0.00026 33.8 9.2 119 203-342 31-155 (216)
12 d1vc4a_ c.1.2.4 (A:) Indole-3- 78.5 6.8 0.0005 32.9 10.1 143 164-326 32-181 (254)
13 d1geqa_ c.1.2.4 (A:) Trp synth 73.4 9 0.00066 31.9 9.5 106 227-338 70-186 (248)
14 d1ccwa_ c.23.6.1 (A:) Glutamat 72.3 7.6 0.00055 29.2 8.0 78 260-337 43-132 (137)
15 d1a04a2 c.23.1.1 (A:5-142) Nit 70.5 17 0.0013 26.6 13.3 77 261-338 38-119 (138)
16 d2j9ga2 c.30.1.1 (A:1-114) Bio 69.8 8.7 0.00064 28.0 7.5 90 201-298 12-101 (114)
17 d1vrda1 c.1.5.1 (A:1-85,A:213- 68.0 9.6 0.0007 33.1 8.8 88 227-327 128-231 (330)
18 d1yxya1 c.1.2.5 (A:4-233) Puta 67.1 27 0.002 27.6 13.8 44 287-331 174-221 (230)
19 d1ulza2 c.30.1.1 (A:1-114) Bio 66.7 9.5 0.00069 27.8 7.1 99 201-312 12-110 (114)
20 d1wa3a1 c.1.10.1 (A:2-203) KDP 66.1 16 0.0012 29.2 9.3 118 203-341 23-146 (202)
21 d1ujpa_ c.1.2.4 (A:) Trp synth 65.8 13 0.00093 31.4 8.9 107 226-338 80-197 (271)
22 d1dxea_ c.1.12.5 (A:) 2-dehydr 64.1 15 0.0011 30.4 9.0 74 263-337 29-109 (253)
23 d1vkfa_ c.1.29.1 (A:) Glycerol 63.4 14 0.001 28.9 7.9 139 162-330 26-169 (172)
24 d1qopa_ c.1.2.4 (A:) Trp synth 63.1 11 0.00078 31.8 7.8 107 226-337 82-199 (267)
25 d2b8ea1 c.108.1.7 (A:416-434,A 61.0 18 0.0013 26.8 8.1 54 285-339 26-80 (135)
26 d2ptda_ c.1.18.2 (A:) Phosphat 58.1 3.6 0.00026 34.9 3.8 31 76-106 53-83 (296)
27 d1zfja1 c.1.5.1 (A:2-94,A:221- 54.2 58 0.0042 28.3 11.6 90 226-328 136-241 (365)
28 d7reqb2 c.23.6.1 (B:476-638) M 53.7 6.6 0.00048 30.5 4.4 53 286-340 104-161 (163)
29 d1vhna_ c.1.4.1 (A:) Putative 53.3 21 0.0015 30.3 8.2 76 260-336 138-224 (305)
30 d1eepa_ c.1.5.1 (A:) Inosine m 50.9 52 0.0038 28.8 10.8 99 217-328 165-285 (388)
31 d1i3ca_ c.23.1.1 (A:) Response 50.8 42 0.003 24.6 9.5 48 287-335 73-126 (144)
32 d1jbea_ c.23.1.1 (A:) CheY pro 49.7 35 0.0025 24.4 8.0 48 287-335 66-119 (128)
33 d1jr1a1 c.1.5.1 (A:17-112,A:23 48.2 50 0.0037 28.8 10.1 90 226-328 148-253 (378)
34 d1piia2 c.1.2.4 (A:1-254) Indo 47.7 63 0.0046 26.5 10.1 160 168-350 38-217 (254)
35 d1qwga_ c.1.27.1 (A:) (2r)-pho 46.7 43 0.0031 27.5 8.8 67 259-326 86-168 (251)
36 d2pl1a1 c.23.1.1 (A:1-119) Pho 46.6 43 0.0032 23.5 11.3 38 287-325 61-100 (119)
37 d7reqa2 c.23.6.1 (A:561-728) M 46.0 26 0.0019 27.1 6.9 77 259-337 76-161 (168)
38 d1vhca_ c.1.10.1 (A:) Hypothet 46.0 67 0.0049 25.5 10.1 82 261-345 29-113 (212)
39 d1xm3a_ c.1.31.1 (A:) Thiazole 45.0 29 0.0021 28.5 7.3 136 166-336 74-223 (251)
40 d2a9pa1 c.23.1.1 (A:2-118) DNA 43.9 47 0.0034 23.2 10.6 49 287-336 61-112 (117)
41 d1zesa1 c.23.1.1 (A:3-123) Pho 43.4 49 0.0036 23.2 9.4 49 287-336 61-115 (121)
42 d1w96a2 c.30.1.1 (A:14-183) Ac 43.3 23 0.0017 27.5 6.1 40 258-297 116-157 (170)
43 d1li4a2 c.23.12.3 (A:3-189,A:3 43.2 62 0.0046 26.7 9.2 73 265-338 63-141 (267)
44 d1kjqa2 c.30.1.1 (A:2-112) Gly 41.5 38 0.0028 24.0 6.8 34 305-338 60-96 (111)
45 d1u0sy_ c.23.1.1 (Y:) CheY pro 40.1 55 0.004 22.9 10.3 46 287-334 63-110 (118)
46 d1tvna1 c.1.8.3 (A:1-293) Endo 39.8 49 0.0036 27.1 8.4 133 170-307 116-260 (293)
47 d1gvfa_ c.1.10.2 (A:) Tagatose 39.0 1E+02 0.0073 25.6 10.7 110 201-323 28-171 (284)
48 d1wv2a_ c.1.31.1 (A:) Thiazole 38.9 53 0.0038 26.8 8.0 52 284-336 166-225 (243)
49 d1mvoa_ c.23.1.1 (A:) PhoP rec 37.5 61 0.0044 22.6 10.9 50 287-337 63-116 (121)
50 d1p6qa_ c.23.1.1 (A:) CheY pro 37.0 65 0.0048 22.8 9.6 50 287-337 68-123 (129)
51 d1uasa2 c.1.8.1 (A:1-273) Meli 35.7 24 0.0017 29.0 5.5 42 286-329 77-133 (273)
52 d1znna1 c.1.2.6 (A:18-271) Pyr 35.2 36 0.0026 27.9 6.2 50 285-335 175-234 (254)
53 d1l6wa_ c.1.10.1 (A:) Decameri 34.4 23 0.0017 28.6 5.0 33 297-333 1-34 (220)
54 d2ayxa1 c.23.1.1 (A:817-949) S 33.3 55 0.004 23.4 6.8 48 287-336 69-121 (133)
55 d2tpsa_ c.1.3.1 (A:) Thiamin p 32.7 25 0.0019 28.3 5.0 56 265-326 87-142 (226)
56 d1k66a_ c.23.1.1 (A:) Response 32.1 86 0.0063 22.8 8.4 39 287-326 79-121 (149)
57 d1q6oa_ c.1.2.3 (A:) 3-keto-L- 31.8 98 0.0071 23.3 8.6 92 223-324 39-132 (213)
58 d1mxsa_ c.1.10.1 (A:) KDPG ald 31.4 1.2E+02 0.0084 24.1 8.9 82 261-345 32-116 (216)
59 d1twda_ c.1.30.1 (A:) Copper h 31.1 1.3E+02 0.0093 24.4 10.0 112 214-327 19-148 (247)
60 d1rvga_ c.1.10.2 (A:) Fructose 31.0 1.4E+02 0.01 24.9 10.9 111 201-324 28-171 (305)
61 d1xrsb1 c.23.6.1 (B:102-261) D 30.5 1E+02 0.0074 23.1 10.1 74 259-336 67-152 (160)
62 d1s8na_ c.23.1.1 (A:) Probable 30.4 46 0.0033 25.4 6.2 47 287-335 65-115 (190)
63 d1pv8a_ c.1.10.3 (A:) 5-aminol 30.3 64 0.0046 27.5 7.4 66 269-337 233-319 (320)
64 d1izca_ c.1.12.5 (A:) Macropho 30.2 1.4E+02 0.01 24.7 10.7 79 263-342 54-142 (299)
65 d1wx0a1 c.1.10.1 (A:1-211) Dec 29.8 41 0.003 26.7 5.8 40 297-340 1-41 (211)
66 d2basa1 c.1.33.1 (A:2-262) Hyp 29.4 31 0.0023 28.0 5.1 40 286-327 192-231 (261)
67 d1yxya1 c.1.2.5 (A:4-233) Puta 29.4 1.2E+02 0.0084 23.4 13.8 152 167-327 2-158 (230)
68 d2f6ua1 c.1.4.1 (A:1001-1231) 28.9 16 0.0012 29.6 3.1 55 271-327 160-216 (231)
69 d1id1a_ c.2.1.9 (A:) Rck domai 28.8 97 0.0071 22.3 7.7 108 201-325 13-124 (153)
70 d1mb3a_ c.23.1.1 (A:) Cell div 28.7 87 0.0063 21.7 10.8 50 287-338 62-118 (123)
71 d1i4na_ c.1.2.4 (A:) Indole-3- 28.5 86 0.0063 25.6 7.7 161 168-349 30-210 (251)
72 d1xi3a_ c.1.3.1 (A:) Thiamin p 27.7 59 0.0043 25.3 6.5 54 265-324 71-124 (206)
73 d1y0ea_ c.1.2.5 (A:) Putative 27.7 50 0.0037 25.5 6.1 40 287-327 165-205 (222)
74 d2q02a1 c.1.15.4 (A:1-271) Put 27.6 84 0.0061 25.0 7.7 68 258-325 18-103 (271)
75 d1krwa_ c.23.1.1 (A:) NTRC rec 27.0 76 0.0055 22.2 6.5 38 287-325 64-103 (123)
76 d1f3ta2 c.1.6.1 (A:44-283) Euk 26.9 1.4E+02 0.01 23.5 11.4 88 230-335 10-100 (240)
77 d1r46a2 c.1.8.1 (A:32-323) Mel 26.8 41 0.003 27.6 5.5 41 286-327 87-140 (292)
78 d1te2a_ c.108.1.6 (A:) Phospha 26.8 1.2E+02 0.0086 22.7 8.3 34 286-320 94-127 (218)
79 d1wbha1 c.1.10.1 (A:1-213) KDP 26.7 1.4E+02 0.01 23.5 8.7 82 261-345 30-114 (213)
80 d2d1pb1 c.114.1.1 (B:1-119) tR 26.6 15 0.0011 26.3 2.2 50 45-107 2-51 (119)
81 d2go7a1 c.108.1.6 (A:3-206) Hy 26.3 71 0.0052 23.9 6.7 17 286-302 88-104 (204)
82 d1qapa1 c.1.17.1 (A:130-296) Q 25.8 35 0.0025 26.3 4.4 64 287-354 68-135 (167)
83 d1ny5a1 c.23.1.1 (A:1-137) Tra 25.6 1.1E+02 0.0078 21.8 9.8 37 287-325 61-100 (137)
84 d1dz3a_ c.23.1.1 (A:) Sporulat 25.4 1E+02 0.0074 21.4 10.1 48 287-336 64-117 (123)
85 d1v5xa_ c.1.2.4 (A:) N-(5'phos 24.2 1.3E+02 0.0093 23.1 7.9 62 260-327 64-125 (200)
86 d1w25a1 c.23.1.1 (A:2-140) Res 23.6 1.2E+02 0.0087 21.6 9.3 39 287-326 62-104 (139)
87 d1viza_ c.1.4.1 (A:) PcrB prot 23.6 25 0.0018 28.4 3.2 42 285-328 168-211 (229)
88 d2pjua1 c.92.3.1 (A:11-196) Pr 23.6 1.2E+02 0.0085 23.4 7.4 41 286-327 107-150 (186)
89 d1rxwa2 c.120.1.2 (A:3-219) Fl 23.4 52 0.0038 26.0 5.3 44 288-332 132-175 (217)
90 d1ys7a2 c.23.1.1 (A:7-127) Tra 23.3 92 0.0067 21.7 6.3 38 287-326 62-102 (121)
91 d1kgsa2 c.23.1.1 (A:2-123) Pho 23.0 1.1E+02 0.0082 21.1 9.3 37 287-325 62-101 (122)
92 d7odca2 c.1.6.1 (A:44-283) Euk 23.0 1.6E+02 0.012 22.9 11.0 49 285-334 48-99 (240)
93 d1egza_ c.1.8.3 (A:) Endogluca 22.6 1.7E+02 0.012 23.4 8.9 135 168-307 112-258 (291)
94 d1rd5a_ c.1.2.4 (A:) Trp synth 22.6 28 0.0021 28.9 3.5 41 286-327 189-230 (261)
95 d1m5wa_ c.1.24.1 (A:) Pyridoxi 22.3 58 0.0043 26.5 5.4 37 286-324 116-152 (242)
96 d2j07a2 c.28.1.1 (A:2-171) DNA 22.1 49 0.0036 25.0 4.7 40 287-327 55-94 (170)
97 d1xm3a_ c.1.31.1 (A:) Thiazole 22.1 42 0.0031 27.5 4.3 50 287-338 116-176 (251)
98 d1wpga2 c.108.1.7 (A:344-360,A 21.6 62 0.0045 24.5 5.2 35 285-320 25-59 (168)
99 d1ul1x2 c.120.1.2 (X:2-217) Fl 21.6 62 0.0045 25.3 5.4 46 286-332 138-183 (216)
100 d1ojxa_ c.1.10.1 (A:) Archaeal 21.3 75 0.0055 25.7 6.0 70 266-336 98-187 (251)
101 d1dxea_ c.1.12.5 (A:) 2-dehydr 20.3 88 0.0064 25.4 6.2 48 286-336 197-245 (253)
No 1
>d1zcca1 c.1.18.3 (A:1-240) Glycerophosphodiester phosphodiesterase UgpQ {Agrobacterium tumefaciens [TaxId: 358]}
Probab=100.00 E-value=7.2e-51 Score=370.57 Aligned_cols=233 Identities=18% Similarity=0.227 Sum_probs=193.1
Q ss_pred ceEEEecCCCCCCCCcchhhhcccccchHHHHHHHHhCCCCEEEEeeeeecCCcEEEEcCCCcccccCCccccccccccC
Q 040734 47 FLVVGHRGHGMNVLQSSDKRMQAIKENSIASFNSSAKYPLDFIEFDVQVTKDGWPVIFHDDVIVSEDNGTIFEKRITELS 126 (361)
Q Consensus 47 ~~iiaHRG~~~~~~~~~~~~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~g~~~~~~v~d~t 126 (361)
+.||||||+++ .+||||++||++|++.|+++||+|||+||||++||+||.+++|+||+. +.|+++|
T Consensus 2 t~iiaHRG~~~-----------~~pENT~~a~~~A~~~G~~~iE~Dv~~TkDg~~Vv~HD~~l~r~t~~~---~~v~~~t 67 (240)
T d1zcca1 2 TKIVSHRGANR-----------FAPENTFAAADLALQQGADYIELDVRESADGVLYVIHDETLDRTTNGT---GPVGHML 67 (240)
T ss_dssp CEEEETTTTTT-----------TSCSSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSSBTTTTSSCC---SBSTTSC
T ss_pred CEEEECCCCCC-----------CCCccHHHHHHHHHHcCCCEEEEEEEEecCCCEEEecccccccccccc---ccHHHhh
Confidence 47999999987 799999999999999999999999999999999999999999999998 9999999
Q ss_pred HHHHhccCCccccccccccccccccCCcccccccccCCcccCHHHHHHhCCCCceEEEEEecCCccchhhhHHHHHHHHH
Q 040734 127 LSEFLSYGPQREQGKIGKSLLRKTKDGKILHWNVEIDDSLCTLQEAFQQVDPNVGFNVELKFDDHIVYEQDYLIRVIQAI 206 (361)
Q Consensus 127 ~~eL~~l~~~~d~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~EvL~~~~~~~~l~iEiK~~~~~~~~~~~~~~~v~~v 206 (361)
|+||+++ ++|+|+... +.+++||||+|+|++++.++.++||+|.+.. +.+
T Consensus 68 ~~el~~l----~~~~~~~~~--------------~~~~~IptL~evl~~~~~~~~l~iEiK~~~~------------~~v 117 (240)
T d1zcca1 68 SSEIDTL----DAGGWFDDR--------------FKGAIVPRLDAYLEHLRGRAGVYIELKYCDP------------AKV 117 (240)
T ss_dssp HHHHTTS----CSSTTTCGG--------------GTTCCCCBHHHHHHHHTTTCEEEEEEEESCH------------HHH
T ss_pred HHHHHHh----hccCcCccc--------------cCCCcCChHHHhhhcccccceeEEEEccCcc------------hhh
Confidence 9999999 577765432 4678999999999999988999999998642 346
Q ss_pred HHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCCh
Q 040734 207 LKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNP 286 (361)
Q Consensus 207 l~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~ 286 (361)
.+++++++..++++++||+++.++++++..|+++++++...... ..+ ..+ ......+..... .+.++
T Consensus 118 ~~l~~~~~~~~~v~~~Sf~~~~l~~~~~~~P~~~~~~~~~~~~~-------~~~----~~~-~~~~~~~~~~~~-~~~~~ 184 (240)
T d1zcca1 118 AALVRHLGMVRDTFYFSFSEEMRQGLQSIAPEFRRMMTLDIAKS-------PSL----VGA-VHHASIIEITPA-QMRRP 184 (240)
T ss_dssp HHHHHHHTCSTTEEEECSCHHHHHHHHHHCTTSEEEEEHHHHSS-------THH----HHH-TTCCSEEEECHH-HHHSH
T ss_pred hHHHHHHHhhcccccccccHHHHHHHHHhhhccceEEeeccccc-------chh----HHH-Hhcccccccchh-hhCCH
Confidence 77788889999999999999999999999999999998743210 111 111 122223332221 23589
Q ss_pred HHHHHHHHcCCEEEEeccCCCHHHH-HHHHHhcCccEEEeCChHHHHHHHHHh
Q 040734 287 GAVTKIKESKLSLLTYGRLNNVAEA-VYMQHLMGIDGVIVDLVQEITEAVYDM 338 (361)
Q Consensus 287 ~~v~~~~~~Gl~v~~w~Tvn~~~~~-~~~~~~~GVdgI~TD~p~~~~~~l~~~ 338 (361)
++++.+|++|+.|++| |+|++.++ +++. .+|||||+||+|+.+.++++++
T Consensus 185 ~~v~~~~~~Gl~v~~w-Tvnd~~~~~~~l~-~~gVdgI~TD~P~l~~~vr~~~ 235 (240)
T d1zcca1 185 GIIEASRKAGLEIMVY-YGGDDMAVHREIA-TSDVDYINLDRPDLFAAVRSGM 235 (240)
T ss_dssp HHHHHHHHHTCEEEEE-CCCCCHHHHHHHH-HSSCSEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEE-ccCCHHHHHHHHH-HcCCCEEEeCcHHHHHHHHHHH
Confidence 9999999999999999 99876554 5564 7999999999999999988765
No 2
>d1o1za_ c.1.18.3 (A:) Hypothetical protein TM1621 {Thermotoga maritima [TaxId: 2336]}
Probab=100.00 E-value=3.2e-48 Score=349.25 Aligned_cols=221 Identities=23% Similarity=0.297 Sum_probs=185.3
Q ss_pred CcceEEEecCCCCCCCCcchhhhcccccchHHHHHHHHhCCCCEEEEeeeeecCCcEEEEcCCCcccccCCccccccccc
Q 040734 45 PKFLVVGHRGHGMNVLQSSDKRMQAIKENSIASFNSSAKYPLDFIEFDVQVTKDGWPVIFHDDVIVSEDNGTIFEKRITE 124 (361)
Q Consensus 45 ~~~~iiaHRG~~~~~~~~~~~~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~g~~~~~~v~d 124 (361)
..|+||||||++. .+||||++||++|++.|+++||+|||+|+||++||+||++++|+|++. +.|++
T Consensus 3 ~~~~iiaHRG~~~-----------~~pENT~~af~~a~~~g~~~iE~Dv~~T~Dg~~Vv~HD~~l~r~t~~~---~~i~~ 68 (226)
T d1o1za_ 3 HHVIVLGHRGYSA-----------KYLENTLEAFMKAIEAGANGVELDVRLSKDGKVVVSHDEDLKRLFGLD---VKIRD 68 (226)
T ss_dssp CCCEEEEETTTTT-----------TSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSEEHHHHCEE---EEGGG
T ss_pred CCCEEEECCCCCC-----------CCCcchHHHHHHHHHcCCCEEEEEEEEccCCCEEeeccceeeeeeccc---ceeee
Confidence 5799999999987 799999999999999999999999999999999999999999999987 99999
Q ss_pred cCHHHHhccCCccccccccccccccccCCcccccccccCCcccCHHHHHHhCCCCceEEEEEecCCccchhhhHHHHHHH
Q 040734 125 LSLSEFLSYGPQREQGKIGKSLLRKTKDGKILHWNVEIDDSLCTLQEAFQQVDPNVGFNVELKFDDHIVYEQDYLIRVIQ 204 (361)
Q Consensus 125 ~t~~eL~~l~~~~d~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~EvL~~~~~~~~l~iEiK~~~~~~~~~~~~~~~v~ 204 (361)
+|++||+++ .+++||||+|+|++++++..++||+|.+. .++
T Consensus 69 ~t~~el~~l----------------------------~~~~iptL~evl~~~~~~~~l~iEiK~~~-----------~~~ 109 (226)
T d1o1za_ 69 ATVSELKEL----------------------------TDGKITTLKEVFENVSDDKIINIEIKERE-----------AAD 109 (226)
T ss_dssp SCHHHHHHH----------------------------TTTCCCBHHHHHHHSCTTSEEEEEECCGG-----------GHH
T ss_pred cchhhhhhh----------------------------hhhcchhHHHHHHHhhcccccchhhcccc-----------ccc
Confidence 999999988 23579999999999998899999999753 355
Q ss_pred HHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcccc-
Q 040734 205 AILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVF- 283 (361)
Q Consensus 205 ~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~- 283 (361)
.+++.++. .++++++||+++.+ ++..|..+.+++..... ...+..........++.++++++..+.
T Consensus 110 ~~~~~~~~---~~~vi~~SF~~~~l---~~~~~~~~~~~l~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (226)
T d1o1za_ 110 AVLEISKK---RKNLIFSSFDLDLL---DEKFKGTKYGYLIDEEN-------YGSIENFVERVEKERPYSLHVPYQAFEL 176 (226)
T ss_dssp HHHHHHTT---CCSEEEEESCHHHH---HHHCTTSCEEEECCTTT-------TCSHHHHHHHHHHHCCSEEEEEGGGGGS
T ss_pred hhhhhhhh---ccceeccccchHHH---HHHHhccceeeEecccc-------cchhHHHHHhhhhcccccccCchhhhhh
Confidence 66666654 36899999999875 45678889988875432 123455556667778888887765432
Q ss_pred -CChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHHHHHH
Q 040734 284 -RNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEITEA 334 (361)
Q Consensus 284 -~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~~ 334 (361)
.++++++.+|++|+.|++| |||+++.+ +++ .+|||||+||+|+.+.++
T Consensus 177 ~~~~~~v~~~~~~g~~v~~w-TVN~~~~~-~~l-~~gVdgIiTD~P~~~~~~ 225 (226)
T d1o1za_ 177 EYAVEVLRSFRKKGIVIFVW-TLNDPEIY-RKI-RREIDGVITDEVELFVKL 225 (226)
T ss_dssp HHHHHHHHHHHHTTCEEEEE-SCCCHHHH-HHH-GGGCSEEEESCHHHHHHT
T ss_pred hhhHHHHHHHHHCCCEEEEE-CCChHHHH-HHH-HcCCCEEEECcHHHHHhc
Confidence 2478999999999999999 99998765 465 699999999999998764
No 3
>d1vd6a1 c.1.18.3 (A:8-224) Putative glycerophosphodiester phosphodiesterase TTHB141 {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=5.9e-46 Score=331.28 Aligned_cols=212 Identities=24% Similarity=0.301 Sum_probs=179.7
Q ss_pred ceEEEecCCCCCCCCcchhhhcccccchHHHHHHHHhCCCCEEEEeeeeecCCcEEEEcCCCcccccCCccccccccccC
Q 040734 47 FLVVGHRGHGMNVLQSSDKRMQAIKENSIASFNSSAKYPLDFIEFDVQVTKDGWPVIFHDDVIVSEDNGTIFEKRITELS 126 (361)
Q Consensus 47 ~~iiaHRG~~~~~~~~~~~~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~g~~~~~~v~d~t 126 (361)
|++|||||+++ .+||||++||++|++.|+++||+|||+||||++||+||+++.|+ .+.++|
T Consensus 1 P~iiaHRG~~~-----------~~pENT~~a~~~a~~~G~~~iE~DV~~TkDg~~vv~HD~~~~r~--------~i~~~~ 61 (217)
T d1vd6a1 1 PLRLGHRGAPL-----------KAKENTLESFRLALEAGLDGVELDVWPTRDGVFAVRHDPDTPLG--------PVFQVD 61 (217)
T ss_dssp CEEEEETSCTT-----------TSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSCSEETTE--------EGGGSC
T ss_pred CeEEECCCCCC-----------CCCchhHHHHHHHHHcCCCEEEEEEEEecCCCEEEecccccCcc--------cccchh
Confidence 78999999987 79999999999999999999999999999999999999998764 478899
Q ss_pred HHHHhccCCccccccccccccccccCCcccccccccCCcccCHHHHHHhCC--CCceEEEEEecCCccchhhhHHHHHHH
Q 040734 127 LSEFLSYGPQREQGKIGKSLLRKTKDGKILHWNVEIDDSLCTLQEAFQQVD--PNVGFNVELKFDDHIVYEQDYLIRVIQ 204 (361)
Q Consensus 127 ~~eL~~l~~~~d~g~~~~~~~~~~~~g~~~~~~~~~~~~iptL~EvL~~~~--~~~~l~iEiK~~~~~~~~~~~~~~~v~ 204 (361)
++||+.+ ..++|||+|++++++ +++.+++|+|...... ...+
T Consensus 62 ~~el~~~-----------------------------~~~iptl~e~l~~~~~~~~~~~~ie~K~~~~~~------~~~~- 105 (217)
T d1vd6a1 62 YADLKAQ-----------------------------EPDLPRLEEVLALKEAFPQAVFNVELKSFPGLG------EEAA- 105 (217)
T ss_dssp HHHHHHH-----------------------------STTCCBHHHHHGGGGTCTTCEEEEEECCCTTSH------HHHH-
T ss_pred HHHHhhh-----------------------------hccCCCHHHHHHHHHhCCCceeeeeeccCcchh------HHHH-
Confidence 9999765 256999999999986 5789999999864310 1233
Q ss_pred HHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccC
Q 040734 205 AILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFR 284 (361)
Q Consensus 205 ~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~ 284 (361)
..+++.+...++++++||++..++++++..|+++++++...... .+....++.++++++.. +
T Consensus 106 --~~l~~~~~~~~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~--------------~~~~~~~~~~i~~~~~~--~ 167 (217)
T d1vd6a1 106 --RRLAALLRGREGVWVSSFDPLALLALRKAAPGLPLGFLMAEDHS--------------ALLPCLGVEAVHPHHAL--V 167 (217)
T ss_dssp --HHHHHHTTTCSSEEEEESCHHHHHHHHHHCTTSCEEEEESSCCG--------------GGGGGSCCSEEEEBGGG--C
T ss_pred --HHHHHHhhccceEEEeeccHHHHHHHHHHhccCceeeecccccc--------------chhhhccceEEcchHhH--H
Confidence 33444556678999999999999999999999999998764321 12335678888887775 4
Q ss_pred ChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHHHHH
Q 040734 285 NPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEITE 333 (361)
Q Consensus 285 ~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~ 333 (361)
++++++.+|++|+.|++| |||+++++++++ ++|||||+||+|+.+.+
T Consensus 168 ~~~~v~~~~~~g~~v~~w-Tvn~~~~~~~~~-~~gvdgI~TD~P~~l~~ 214 (217)
T d1vd6a1 168 TEEAVAGWRKRGLFVVAW-TVNEEGEARRLL-ALGLDGLIGDRPEVLLP 214 (217)
T ss_dssp CHHHHHHHHHTTCEEEEE-CCCCHHHHHHHH-HTTCSEEEESCHHHHTT
T ss_pred HHHHHHHHHHCCCEEEEE-CCCCHHHHHHHH-hCCCCEEEECCHHHHhh
Confidence 999999999999999999 999999999997 69999999999998865
No 4
>d1ydya1 c.1.18.3 (A:29-356) Glycerophosphodiester phosphodiesterase GlpQ {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=1.2e-43 Score=334.82 Aligned_cols=269 Identities=17% Similarity=0.156 Sum_probs=183.5
Q ss_pred CcceEEEecCCCCCCCCcchhhhcccccchHHHHHHHHhCCCCEEEEeeeeecCCcEEEEcCCCcccccCCcc-------
Q 040734 45 PKFLVVGHRGHGMNVLQSSDKRMQAIKENSIASFNSSAKYPLDFIEFDVQVTKDGWPVIFHDDVIVSEDNGTI------- 117 (361)
Q Consensus 45 ~~~~iiaHRG~~~~~~~~~~~~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~g~~------- 117 (361)
++++||||||+++ .+||||++||++|++.|||+||+|||+||||++||+||.+|.|+|+...
T Consensus 1 ~~~liIaHRG~~~-----------~~PENTl~af~~A~~~gad~iE~DV~lTkDg~~Vv~HD~~l~r~t~~~~~~~~~~~ 69 (328)
T d1ydya1 1 NEKIVIAHRGASG-----------YLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRAR 69 (328)
T ss_dssp CCCEEEETTTTTT-----------TSSTTCHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSBCTTTBSHHHHSTTCCC
T ss_pred CCCEEEeCCCCCC-----------CCCccHHHHHHHHHHcCCCEEEEeeeEccCCcEEEECCchhhcccCCCCCcccccc
Confidence 4689999999987 7999999999999999999999999999999999999999999986310
Q ss_pred --ccccccccCHHHHhccCCcccccccccccccc---ccCCcccccccccCCcccCHHHHHHhCC-------CCceEEEE
Q 040734 118 --FEKRITELSLSEFLSYGPQREQGKIGKSLLRK---TKDGKILHWNVEIDDSLCTLQEAFQQVD-------PNVGFNVE 185 (361)
Q Consensus 118 --~~~~v~d~t~~eL~~l~~~~d~g~~~~~~~~~---~~~g~~~~~~~~~~~~iptL~EvL~~~~-------~~~~l~iE 185 (361)
..+.|.++|++||+++ ++|.++...-.. .-.++ ......+.+||||+|+++.++ .++.+++|
T Consensus 70 ~~~~~~v~~~t~~el~~l----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~iptL~~~~~~~~~~~~~~~~~~~~~iE 143 (328)
T d1ydya1 70 KDGRYYAIDFTLDEIKSL----KFTEGFDIENGKKVQTYPGR--FPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPE 143 (328)
T ss_dssp TTSCCBGGGSCHHHHHHS----CBCSCEEEETTEEEESSTTS--SCTTCSCCCCCBHHHHHHHHHHHHHHHSCCCEEEEE
T ss_pred cCCCceeeecchhhhhcc----cccccccccccccccccccc--ccccCCCcccCcHHHHHHHHHHHhhhcCCCceeeec
Confidence 1378999999999999 456554321000 00000 001246789999999999985 36899999
Q ss_pred EecCCccchhhhHHHHHHHHHHHHHHHhc---CCCCEEEEcCCHHHHHHHHHH-----CCCCCEEEEccCCCccc-----
Q 040734 186 LKFDDHIVYEQDYLIRVIQAILKIVFEFA---ENRPIIFSTFQPDAAVLIRKL-----QSTYPVFFLTNGGTEIF----- 252 (361)
Q Consensus 186 iK~~~~~~~~~~~~~~~v~~vl~~l~~~~---~~~rv~~~Sf~~~~l~~l~~~-----~p~~~~~~l~~~~~~~~----- 252 (361)
+|.+....... ...++.+..+++.++ ..++++++||++..++.+++. .+.++...+........
T Consensus 144 iK~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~SF~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 220 (328)
T d1ydya1 144 IKAPWFHHQEG---KDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQ 220 (328)
T ss_dssp ECCHHHHHHTT---CCHHHHHHHHHHHTTCCSTTSSBEEEESCHHHHHHHHHTHHHHHTCCCEEEEEECCGGGCCCEEEC
T ss_pred cCCcchhhhcc---hhhHHHHHHHHHHhcccCCCceEEEEecCHHHHHHHHHHcCcccccccceeeeecccccchhcccc
Confidence 99764211111 124555666666554 457899999999999999853 34555554443211100
Q ss_pred -----cc--cccccHHHHHHHHHhcCCcEEEcCCcc---------ccCChHHHHHHHHcCCEEEEeccCCCHHHHH----
Q 040734 253 -----YD--VRRNSLEEAVKVCLEGGLQGIVSEVKG---------VFRNPGAVTKIKESKLSLLTYGRLNNVAEAV---- 312 (361)
Q Consensus 253 -----~d--~~~~~l~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~---- 312 (361)
.. ............. ...+.++...+.. ...++.+|+.+|++|+.|++| |||+++++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~l~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~gl~v~~w-Tvn~~~~~~~~~d 298 (328)
T d1ydya1 221 PDGSWVNYNYDWMFKPGAMKQV-AEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPY-TVRSDKLPEYTPD 298 (328)
T ss_dssp TTSCEEECCCGGGGSTTHHHHH-TTTCSEEEEBGGGTBCTTCBTTBCCBCSHHHHHHHTTCEECCB-CBCTTSCCTTCSS
T ss_pred ccccccccchhhhcChhhHHHH-HhhCCeeecchhhcccccccccccCCHHHHHHHHHCCCEEEEE-ccCChHHhhhccC
Confidence 00 0000000111111 2334455444332 234678999999999999999 999854321
Q ss_pred ------HHHHhcCccEEEeCChHHHHHHH
Q 040734 313 ------YMQHLMGIDGVIVDLVQEITEAV 335 (361)
Q Consensus 313 ------~~~~~~GVdgI~TD~p~~~~~~l 335 (361)
..+.++||||||||+|+++.+++
T Consensus 299 ~~~~~~~~~~~~GVDgIiTD~P~~~~~~l 327 (328)
T d1ydya1 299 VNQLYDALYNKAGVNGLFTDFPDKAVKFL 327 (328)
T ss_dssp HHHHHHHHHTTSCCSEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEcCHHHHHHHh
Confidence 22235899999999999999987
No 5
>d1qasa3 c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (PLC-D1) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.61 E-value=0.00052 Score=62.46 Aligned_cols=40 Identities=15% Similarity=0.178 Sum_probs=35.9
Q ss_pred cccchHHHHHHHHhCCCCEEEEeeeeecCCcEEEEcCCCc
Q 040734 70 IKENSIASFNSSAKYPLDFIEFDVQVTKDGWPVIFHDDVI 109 (361)
Q Consensus 70 ~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l 109 (361)
.-.=++.|+..|++.||.+||+|||--.||+|||.|..++
T Consensus 23 ~~~ss~~~~~~~l~~G~R~ielD~w~g~d~ePvV~HG~t~ 62 (327)
T d1qasa3 23 TGPSSTEAYIRALCKGCRCLELDCWDGPNQEPIIYHGYTF 62 (327)
T ss_dssp SCCBCHHHHHHHHHTTCCEEEEEEECCGGGCCEESCTTSC
T ss_pred cCcccHHHHHHHHHhCCcEEEEEeecCCCCCeEEeeCCcc
Confidence 3445799999999999999999999888999999998776
No 6
>d2zkmx4 c.1.18.1 (X:312-660) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.09 E-value=0.0016 Score=59.64 Aligned_cols=39 Identities=18% Similarity=0.146 Sum_probs=34.3
Q ss_pred ccchHHHHHHHHhCCCCEEEEeeee--ecCCcEEEEcCCCc
Q 040734 71 KENSIASFNSSAKYPLDFIEFDVQV--TKDGWPVIFHDDVI 109 (361)
Q Consensus 71 pENTl~Af~~A~~~Gad~vE~DV~l--TkDg~~Vv~HD~~l 109 (361)
-.=++.||..|++.||.+||+|||= +.||+|||.|..++
T Consensus 27 ~~~s~~~~~~~l~~G~R~~eldi~dG~~~d~~Pvv~hg~t~ 67 (349)
T d2zkmx4 27 GLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTM 67 (349)
T ss_dssp SCBCTHHHHHHHHTTCCEEEEEEECCCTTCCSCEECCTTSS
T ss_pred CcccHHHHHHHHHhCCcEEEEEecCCCCCCCCcEEeeCCee
Confidence 3457899999999999999999994 46899999998876
No 7
>d1vhca_ c.1.10.1 (A:) Hypothetical protein HI0047 {Haemophilus influenzae [TaxId: 727]}
Probab=90.76 E-value=3.2 Score=34.02 Aligned_cols=143 Identities=16% Similarity=0.142 Sum_probs=87.2
Q ss_pred CHHHHHHhCCCCceEEEEEecCCccchhhhHHHHHHHHHHHHHHHhcCCCCEEEEcCC---HHHHHHHHHHCCCCCEEEE
Q 040734 168 TLQEAFQQVDPNVGFNVELKFDDHIVYEQDYLIRVIQAILKIVFEFAENRPIIFSTFQ---PDAAVLIRKLQSTYPVFFL 244 (361)
Q Consensus 168 tL~EvL~~~~~~~~l~iEiK~~~~~~~~~~~~~~~v~~vl~~l~~~~~~~rv~~~Sf~---~~~l~~l~~~~p~~~~~~l 244 (361)
|-+++++.+. ...+..=+...+.. -+..+.+.+.+.|.. -+=+.--+ .+.++.+++.+|++.+|.-
T Consensus 3 ~~~~~~~~l~-~~~iipvlr~~~~~---------~~~~~~~al~~~Gi~-~iEitl~~~~a~~~I~~l~~~~p~~~vGaG 71 (212)
T d1vhca_ 3 TTQQIIEKLR-ELKIVPVIALDNAD---------DILPLADTLAKNGLS-VAEITFRSEAAADAIRLLRANRPDFLIAAG 71 (212)
T ss_dssp CHHHHHHHHH-HHCEEEEECCSSGG---------GHHHHHHHHHHTTCC-EEEEETTSTTHHHHHHHHHHHCTTCEEEEE
T ss_pred cHHHHHHHHH-HCCEEEEEeCCCHH---------HHHHHHHHHHHCCCC-EEEEeCCChhHHHHHHHHHhcCCCceEeee
Confidence 4567777776 23333334433321 234455555555542 12222222 4667778888898777654
Q ss_pred ccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEE
Q 040734 245 TNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVI 324 (361)
Q Consensus 245 ~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~ 324 (361)
+-. +. +.++.+...|+..+..+. .++++++.++++++.++.= +-++.|+..++ ++|++.|-
T Consensus 72 TV~-----------~~-~~~~~a~~aGa~FivSP~----~~~~v~~~a~~~~i~~iPG--v~TpsEi~~A~-~~G~~~vK 132 (212)
T d1vhca_ 72 TVL-----------TA-EQVVLAKSSGADFVVTPG----LNPKIVKLCQDLNFPITPG--VNNPMAIEIAL-EMGISAVK 132 (212)
T ss_dssp SCC-----------SH-HHHHHHHHHTCSEEECSS----CCHHHHHHHHHTTCCEECE--ECSHHHHHHHH-HTTCCEEE
T ss_pred ecc-----------cH-HHHHHHHhhCCcEEECCC----CCHHHHHHHHhcCCCccCC--cCCHHHHHHHH-HCCCCEEE
Confidence 422 12 334556788998887664 2899999999999988664 55788888886 69998554
Q ss_pred eCChH-HH--HHHHHHhcCC
Q 040734 325 VDLVQ-EI--TEAVYDMIKP 341 (361)
Q Consensus 325 TD~p~-~~--~~~l~~~~~~ 341 (361)
- +|. .+ .+|++.+..|
T Consensus 133 ~-FPA~~~gG~~~lkal~~p 151 (212)
T d1vhca_ 133 F-FPAEASGGVKMIKALLGP 151 (212)
T ss_dssp E-TTTTTTTHHHHHHHHHTT
T ss_pred E-ccccccchHHHHHHHhcc
Confidence 4 443 22 4666665544
No 8
>d1a53a_ c.1.2.4 (A:) Indole-3-glycerophosphate synthase, IPGS {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=85.35 E-value=4.1 Score=34.16 Aligned_cols=167 Identities=11% Similarity=0.039 Sum_probs=101.2
Q ss_pred CCcccCHHHHHHhCC--CCceEEEEEecCCccchh-hhHHHHHHHHHHHHHHHhcCC------CCEEEEcCCHHHHHHHH
Q 040734 163 DDSLCTLQEAFQQVD--PNVGFNVELKFDDHIVYE-QDYLIRVIQAILKIVFEFAEN------RPIIFSTFQPDAAVLIR 233 (361)
Q Consensus 163 ~~~iptL~EvL~~~~--~~~~l~iEiK~~~~~~~~-~~~~~~~v~~vl~~l~~~~~~------~rv~~~Sf~~~~l~~l~ 233 (361)
..++.+|.+.+.... +...++-|+|..+|..-. ..+... +.+.. +.+.. +.-+| .-+.+.|..++
T Consensus 26 ~~p~~~l~~~i~~~~~~~~~~iIaEiKr~SPS~g~i~~d~~~----~a~~~-~~gA~aiSVLTd~~~F-~Gs~~dl~~v~ 99 (247)
T d1a53a_ 26 QRPIISLNERILEFNKRNITAIIAEYKRKSPSGLDVERDPIE----YSKFM-ERYAVGLSILTEEKYF-NGSYETLRKIA 99 (247)
T ss_dssp CSCCCCHHHHHHHHHHTTCCCEEEEECSBCTTSCBCCCCHHH----HHHHH-TTTCSEEEEECCCTTT-CCCHHHHHHHH
T ss_pred cCCccCHHHHHHHHHhcCCCeEEeeEecCCCCCCccccCHHH----HHHHH-HhCCCeEEEecCcccc-ccchHHHHHHH
Confidence 345678999888764 568899999987654110 001111 22222 22311 11111 23678888888
Q ss_pred HHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcccc--CChHHHHHHHHcCCEEEEeccCCCHHHH
Q 040734 234 KLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVF--RNPGAVTKIKESKLSLLTYGRLNNVAEA 311 (361)
Q Consensus 234 ~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~--~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~ 311 (361)
+.. ++|+..- |+-...+ -+..++..|++++.+-...+- .-.++++.+++.|+.+.+= |++.+++
T Consensus 100 ~~~-~~PiLrK---------DFIid~~--QI~ea~~~GADaiLLI~~~L~~~~l~~l~~~a~~lgl~~LvE--vh~~~El 165 (247)
T d1a53a_ 100 SSV-SIPILMK---------DFIVKES--QIDDAYNLGADTVLLIVKILTERELESLLEYARSYGMEPLIE--INDENDL 165 (247)
T ss_dssp HHC-CSCEEEE---------SCCCSHH--HHHHHHHHTCSEEEEEGGGSCHHHHHHHHHHHHTTTCCCEEE--ECSHHHH
T ss_pred hcc-ccceeec---------ccccChH--HHHHHHHhhcchhhhhhhhccHHHHHHHHHHHHHHhhhHHhh--cCCHHHH
Confidence 765 5776532 1111111 244567889998877665541 1258899999999999887 7889999
Q ss_pred HHHHHhcCccEEEeCC---------hHHHHHHHHHhcCCcccccccCc
Q 040734 312 VYMQHLMGIDGVIVDL---------VQEITEAVYDMIKPAKVVEKEDN 350 (361)
Q Consensus 312 ~~~~~~~GVdgI~TD~---------p~~~~~~l~~~~~~~~~~~~~~~ 350 (361)
.+.+ ..|++.|-.|. +....+.............++|.
T Consensus 166 ~~a~-~~~a~iIGINnRnL~t~~vd~~~~~~L~~~ip~~~~~IaESGI 212 (247)
T d1a53a_ 166 DIAL-RIGARFIGINSRDLETLEINKENQRKLISMIPSNVVKVAESGI 212 (247)
T ss_dssp HHHH-HTTCSEEEEESBCTTTCCBCHHHHHHHHHHSCTTSEEEEESCC
T ss_pred HHHH-hCCCCeEeeeccChhhhhhhhhHHHHHHhhCCCCCeEEEecCC
Confidence 8886 69999887664 55555555555444444444443
No 9
>d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId: 562]}
Probab=82.98 E-value=11 Score=30.72 Aligned_cols=141 Identities=16% Similarity=0.019 Sum_probs=86.1
Q ss_pred cCHHHHHHhCCCCceEEEEEecCCccchhhhHHHHHHHHHHHHHHHhcCCCCEEEE--cCC-HHHHHHHHHHCCCCCEEE
Q 040734 167 CTLQEAFQQVDPNVGFNVELKFDDHIVYEQDYLIRVIQAILKIVFEFAENRPIIFS--TFQ-PDAAVLIRKLQSTYPVFF 243 (361)
Q Consensus 167 ptL~EvL~~~~~~~~l~iEiK~~~~~~~~~~~~~~~v~~vl~~l~~~~~~~rv~~~--Sf~-~~~l~~l~~~~p~~~~~~ 243 (361)
++.+++|...+ +.-.+-+. +. .-+..+.+.+.+.|.. -+=+. +-+ .+.++.+++.+|++.++.
T Consensus 6 ~~~~~~l~~~~--iipvlr~~--~~---------~~a~~~~~al~~~Gi~-~iEitl~tp~a~~~I~~l~~~~p~~~vGa 71 (213)
T d1wbha1 6 TSAESILTTGP--VVPVIVVK--KL---------EHAVPMAKALVAGGVR-VLNVTLRTECAVDAIRAIAKEVPEAIVGA 71 (213)
T ss_dssp SCHHHHHHSCS--EEEEECCS--SG---------GGHHHHHHHHHHTTCC-EEEEESCSTTHHHHHHHHHHHCTTSEEEE
T ss_pred cCHHHHHHhCC--EEEEEECC--CH---------HHHHHHHHHHHHCCCC-EEEEeCCChhHHHHHHHHHHHCCCCeeec
Confidence 46667776653 33333333 22 1244556666666642 22232 222 467778888889877665
Q ss_pred EccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEE
Q 040734 244 LTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGV 323 (361)
Q Consensus 244 l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI 323 (361)
-+-. +. +.++.+.+.|+..+..+. .++++++.++++|+.++.= +-++.|+...+ ++|.+.+
T Consensus 72 GTV~-----------~~-~~~~~a~~aGa~FivSP~----~~~~v~~~a~~~~i~~iPG--v~TpsEi~~A~-~~G~~~v 132 (213)
T d1wbha1 72 GTVL-----------NP-QQLAEVTEAGAQFAISPG----LTEPLLKAATEGTIPLIPG--ISTVSELMLGM-DYGLKEF 132 (213)
T ss_dssp ESCC-----------SH-HHHHHHHHHTCSCEEESS----CCHHHHHHHHHSSSCEEEE--ESSHHHHHHHH-HTTCCEE
T ss_pred cccc-----------cH-HHHHHHHHCCCcEEECCC----CCHHHHHHHHhcCCCccCC--cCCHHHHHHHH-HCCCCEE
Confidence 4322 12 234556688888877654 2899999999999988765 56788988886 6999855
Q ss_pred EeCChHH-H--HHHHHHhcCC
Q 040734 324 IVDLVQE-I--TEAVYDMIKP 341 (361)
Q Consensus 324 ~TD~p~~-~--~~~l~~~~~~ 341 (361)
- =+|.. + ..+++.+..|
T Consensus 133 K-lFPA~~~Gg~~~lkal~~p 152 (213)
T d1wbha1 133 K-FFPAEANGGVKALQAIAGP 152 (213)
T ss_dssp E-ETTTTTTTHHHHHHHHHTT
T ss_pred E-eccchhcChHHHHHHhcCc
Confidence 4 34432 2 4566655544
No 10
>d1vkfa_ c.1.29.1 (A:) Glycerol uptake operon antiterminator-related protein TM1436 {Thermotoga maritima [TaxId: 2336]}
Probab=82.65 E-value=1.6 Score=34.64 Aligned_cols=52 Identities=13% Similarity=0.130 Sum_probs=41.1
Q ss_pred ChHHHHHHHHcCCEEEEe-----ccCCCHHHHHHHHHhcCccEEEeCChHHHHHHHHH
Q 040734 285 NPGAVTKIKESKLSLLTY-----GRLNNVAEAVYMQHLMGIDGVIVDLVQEITEAVYD 337 (361)
Q Consensus 285 ~~~~v~~~~~~Gl~v~~w-----~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~~l~~ 337 (361)
-++.++.+|++|..+++- |--++....+++ +..++|||+|=.+..+..+.+.
T Consensus 33 l~~~v~~~k~~gK~v~VHiDLi~GL~~d~~av~fl-k~~~~dGIISTk~~~i~~Ak~~ 89 (172)
T d1vkfa_ 33 LKFHLKILKDRGKTVFVDMDFVNGLGEGEEAILFV-KKAGADGIITIKPKNYVVAKKN 89 (172)
T ss_dssp HHHHHHHHHHTTCEEEEEGGGEETCCSSHHHHHHH-HHHTCSEEEESCHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCEEEEEeeecCCCCCCHHHHHHH-HHcCCCEEEECCHHHHHHHHHc
Confidence 479999999999999886 113466666666 4689999999999999887653
No 11
>d1mxsa_ c.1.10.1 (A:) KDPG aldolase {Pseudomonas putida [TaxId: 303]}
Probab=81.85 E-value=3.6 Score=33.82 Aligned_cols=119 Identities=13% Similarity=0.030 Sum_probs=75.6
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCC---HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCC
Q 040734 203 IQAILKIVFEFAENRPIIFSTFQ---PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEV 279 (361)
Q Consensus 203 v~~vl~~l~~~~~~~rv~~~Sf~---~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~ 279 (361)
+..+.+.+.+.|.. -+=+.--+ .+.++.+++.+|++.+|.-+-. +. +.++.+...|+..+..+.
T Consensus 31 a~~~~~al~~~Gi~-~iEitl~~p~a~~~i~~l~~~~p~~~vGaGTV~-----------~~-~~~~~a~~aGa~FivsP~ 97 (216)
T d1mxsa_ 31 ILPLADALAAGGIR-TLEVTLRSQHGLKAIQVLREQRPELCVGAGTVL-----------DR-SMFAAVEAAGAQFVVTPG 97 (216)
T ss_dssp HHHHHHHHHHTTCC-EEEEESSSTHHHHHHHHHHHHCTTSEEEEECCC-----------SH-HHHHHHHHHTCSSEECSS
T ss_pred HHHHHHHHHHCCCC-EEEEeCCChhHHHHHHHHHHhCCCcceeeeeee-----------cH-HHHHHHHhCCCCEEECCC
Confidence 44556666666642 22233223 3566667778888777654422 12 334556678888877654
Q ss_pred ccccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHH-H--HHHHHHhcCCc
Q 040734 280 KGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQE-I--TEAVYDMIKPA 342 (361)
Q Consensus 280 ~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~-~--~~~l~~~~~~~ 342 (361)
.++++++.++++|+.++.= +-++.|+..++ ++|++.+-- +|.. . ..|++.+..|-
T Consensus 98 ----~~~~v~~~a~~~~i~~iPG--v~TpsEi~~A~-~~G~~~vKl-FPA~~~~g~~~ikal~~p~ 155 (216)
T d1mxsa_ 98 ----ITEDILEAGVDSEIPLLPG--ISTPSEIMMGY-ALGYRRFKL-FPAEISGGVAAIKAFGGPF 155 (216)
T ss_dssp ----CCHHHHHHHHHCSSCEECE--ECSHHHHHHHH-TTTCCEEEE-TTHHHHTHHHHHHHHHTTT
T ss_pred ----CcHHHHHHHHhcCCCccCC--cCCHHHHHHHH-HCCCCEEEe-ccccccccHHHHHHHhccc
Confidence 2899999999999988654 45688888886 799985554 5543 2 46776655443
No 12
>d1vc4a_ c.1.2.4 (A:) Indole-3-glycerophosphate synthase, IPGS {Thermus thermophilus [TaxId: 274]}
Probab=78.49 E-value=6.8 Score=32.85 Aligned_cols=143 Identities=11% Similarity=-0.047 Sum_probs=86.4
Q ss_pred CcccCHHHHHHhCCCCceEEEEEecCCccchhhhHHHHHHHHHHHHHHHhcCC------CCEEEEcCCHHHHHHHHHHCC
Q 040734 164 DSLCTLQEAFQQVDPNVGFNVELKFDDHIVYEQDYLIRVIQAILKIVFEFAEN------RPIIFSTFQPDAAVLIRKLQS 237 (361)
Q Consensus 164 ~~iptL~EvL~~~~~~~~l~iEiK~~~~~~~~~~~~~~~v~~vl~~l~~~~~~------~rv~~~Sf~~~~l~~l~~~~p 237 (361)
.+.+.|.+.|. ++++.++-|+|..+|.. +...+.-...+.....+.|.. ++-+| .-+.+.|..+++..
T Consensus 32 ~~~~~f~~al~--~~~~~vIAEiKr~SPS~--G~i~~~dp~~~A~~y~~~GA~aiSVLTe~~~F-~Gs~~dl~~v~~~~- 105 (254)
T d1vc4a_ 32 PSVPSFKEALL--RPGLSVIAEVKRQSPSE--GLIREVDPVEAALAYARGGARAVSVLTEPHRF-GGSLLDLKRVREAV- 105 (254)
T ss_dssp CCCCCHHHHHT--SSSCEEEEEECSCCTTT--CCCCSCCHHHHHHHHHHTTCSEEEEECCCSSS-CCCHHHHHHHHHHC-
T ss_pred CCCccHHHHHh--cCCCeEEEEeeecCCCC--CccccCCHHHHHHHHHhcCCceEEEEcCcccc-cccHHHHHHHHHHc-
Confidence 45677888875 35789999999877641 000000011233444444421 11111 22577888888764
Q ss_pred CCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcccc-CChHHHHHHHHcCCEEEEeccCCCHHHHHHHHH
Q 040734 238 TYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVF-RNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQH 316 (361)
Q Consensus 238 ~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~-~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~ 316 (361)
++|+..--.- .. +.-+..++.+|++++.+-...+- ...++++.++..|+.+.+= |.+.+++.+.+
T Consensus 106 ~iPvLrKDFI---------id--~~QI~ea~~~GADaVLLIaall~~~l~~l~~~A~~lgl~~LVE--vh~~~El~~a~- 171 (254)
T d1vc4a_ 106 DLPLLRKDFV---------VD--PFMLEEARAFGASAALLIVALLGELTGAYLEEARRLGLEALVE--VHTERELEIAL- 171 (254)
T ss_dssp CSCEEEESCC---------CS--HHHHHHHHHTTCSEEEEEHHHHGGGHHHHHHHHHHHTCEEEEE--ECSHHHHHHHH-
T ss_pred CCCcccCCcc---------cc--HHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhCCceEEE--eccHHHHhhhh-
Confidence 6777542211 11 11234577889988765543221 1247889999999999997 78899998886
Q ss_pred hcCccEEEeC
Q 040734 317 LMGIDGVIVD 326 (361)
Q Consensus 317 ~~GVdgI~TD 326 (361)
..|++.|-.|
T Consensus 172 ~~~a~iIGIN 181 (254)
T d1vc4a_ 172 EAGAEVLGIN 181 (254)
T ss_dssp HHTCSEEEEE
T ss_pred cCCCCEEEEe
Confidence 5888876665
No 13
>d1geqa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=73.38 E-value=9 Score=31.93 Aligned_cols=106 Identities=15% Similarity=0.192 Sum_probs=61.7
Q ss_pred HHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccCC
Q 040734 227 DAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLN 306 (361)
Q Consensus 227 ~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn 306 (361)
+.++.+|+ .++.|+.++..... +....+++.++.+++.|++++.+.---.--..++...++++|+.....-+.+
T Consensus 70 ~~~~~~r~-~~~~pivlm~Y~N~-----i~~~G~~~f~~~~~~~Gv~GliipDLP~eE~~~~~~~~~~~gl~~I~lvaPt 143 (248)
T d1geqa_ 70 WIVKEFRR-HSSTPIVLMTYYNP-----IYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPN 143 (248)
T ss_dssp HHHHHHHT-TCCCCEEEEECHHH-----HHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTT
T ss_pred HHHHHHhh-cCCCcEEEEecccc-----ccccCHHHHhhhhcccCeeEEeccCCcHHHHHHHHhhccccCcceEEEeccc
Confidence 45566665 45788877764321 1223467778888899999876542111113467888899999886543666
Q ss_pred CHHH-HHHHHH----------hcCccEEEeCChHHHHHHHHHh
Q 040734 307 NVAE-AVYMQH----------LMGIDGVIVDLVQEITEAVYDM 338 (361)
Q Consensus 307 ~~~~-~~~~~~----------~~GVdgI~TD~p~~~~~~l~~~ 338 (361)
++++ +++... .+||.|.-+..+..+.+++++.
T Consensus 144 t~~~ri~~i~~~s~gFiY~vs~~GvTG~~~~~~~~~~~~v~~v 186 (248)
T d1geqa_ 144 TPDERLKVIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRA 186 (248)
T ss_dssp CCHHHHHHHHHHCSSEEEEECCC-------CCCHHHHHHHHHH
T ss_pred chhHHHHHHHhcCCCeEEEEecccccccchhhhhhHHHHHHHH
Confidence 6554 444321 2678888888888887776654
No 14
>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}
Probab=72.34 E-value=7.6 Score=29.17 Aligned_cols=78 Identities=17% Similarity=0.069 Sum_probs=45.2
Q ss_pred HHHHHHHHHhcCCcEEEcCCccc---cCChHHHHHHHHcC---CEEEEeccC----CCHHHHHHHHHhcCccEEE--eCC
Q 040734 260 LEEAVKVCLEGGLQGIVSEVKGV---FRNPGAVTKIKESK---LSLLTYGRL----NNVAEAVYMQHLMGIDGVI--VDL 327 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~v~~~~~~G---l~v~~w~Tv----n~~~~~~~~~~~~GVdgI~--TD~ 327 (361)
.++.++.+.+.+++.+.++.... ...+++++.++++| +++++=|.+ +++.+...-++++|||.|+ .-.
T Consensus 43 ~e~iv~a~~~~~~d~v~lS~~~~~~~~~~~~~~~~l~~~~~~~i~iivGG~~~~~~~~~~~~~~~l~~~Gv~~if~~~t~ 122 (137)
T d1ccwa_ 43 QELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGGNIVVGKQHWPDVEKRFKDMGYDRVYAPGTP 122 (137)
T ss_dssp HHHHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEESCSSSSCCHHHHHHHHHHTTCSEECCTTCC
T ss_pred HHHHHHHHHhcCCCEEEEeeccccchHHHHHHHHHHHHhccCCCEEEEeCCcCCCccccHHHHHHHHHcCCCEEECCCCC
Confidence 45555666666666555443211 11357778887776 566665432 2344443333579999999 455
Q ss_pred hHHHHHHHHH
Q 040734 328 VQEITEAVYD 337 (361)
Q Consensus 328 p~~~~~~l~~ 337 (361)
++.+.+++++
T Consensus 123 ~~~~~~~l~~ 132 (137)
T d1ccwa_ 123 PEVGIADLKK 132 (137)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666777665
No 15
>d1a04a2 c.23.1.1 (A:5-142) Nitrate/nitrite response regulator (NarL), receiver domain {Escherichia coli [TaxId: 562]}
Probab=70.49 E-value=17 Score=26.61 Aligned_cols=77 Identities=14% Similarity=0.163 Sum_probs=47.8
Q ss_pred HHHHHHHHhcCCcEEEcCCccccCC-hHHHHHHHHcC--CEEEEeccCCCHHHHHHHHHhcCccEEEe--CChHHHHHHH
Q 040734 261 EEAVKVCLEGGLQGIVSEVKGVFRN-PGAVTKIKESK--LSLLTYGRLNNVAEAVYMQHLMGIDGVIV--DLVQEITEAV 335 (361)
Q Consensus 261 ~~~~~~~~~~~~~~i~~~~~~~~~~-~~~v~~~~~~G--l~v~~w~Tvn~~~~~~~~~~~~GVdgI~T--D~p~~~~~~l 335 (361)
.++++.++...++.+.++...--.+ -++++.+++.+ .++.+.+...+.....+++ ..|++++++ -.+..+.+.+
T Consensus 38 ~~al~~~~~~~~DlvllD~~mP~~~G~el~~~ir~~~~~~~vivlt~~~~~~~~~~a~-~~Ga~~yl~Kp~~~~~L~~~i 116 (138)
T d1a04a2 38 EQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTAL-KRGADGYLLKDMEPEDLLKAL 116 (138)
T ss_dssp HHHHHHHHHHCCSEEEEETTSTTSCHHHHHHHHHHSCCCSEEEEEECCCCHHHHHHHH-HTTCSEEEETTCCHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhhCCCCCEEEEEEECCHHHHHHHH-HcCCCEEEECCCCHHHHHHHH
Confidence 4445555555566655555432112 27778887764 6777883345566666665 699999997 4577777766
Q ss_pred HHh
Q 040734 336 YDM 338 (361)
Q Consensus 336 ~~~ 338 (361)
++.
T Consensus 117 ~~v 119 (138)
T d1a04a2 117 HQA 119 (138)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 16
>d2j9ga2 c.30.1.1 (A:1-114) Biotin carboxylase (BC), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=69.78 E-value=8.7 Score=27.99 Aligned_cols=90 Identities=8% Similarity=-0.013 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCc
Q 040734 201 RVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVK 280 (361)
Q Consensus 201 ~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~ 280 (361)
..+-++++..++.+.. -+.+.|-....-.+++..+ ..+.....+. ...+...+..++.+++.+++.+++.|.
T Consensus 12 eiA~Ri~ra~~elgi~-tvavys~~D~~~~h~~~ad----e~v~lg~~~~---~~sYl~~~~Ii~~A~~~~~dAiHPGyG 83 (114)
T d2j9ga2 12 EIALRILRACKELGIK-TVAVHSSADRDLKHVLLAD----ETVCIGPAPS---VKSYLNIPAIISAAEITGAVAIHPGYG 83 (114)
T ss_dssp HHHHHHHHHHHHHTCE-EEEEEEGGGTTCHHHHHSS----EEEEEECSSG---GGTTTCHHHHHHHHHHHTCSEEECCSS
T ss_pred HHHHHHHHHHHHhCCc-eEEEeccccccccceecCC----ceeecCCCch---hhhhcCHHHHHHHHHHhCCceeecchh
Confidence 4566777888888764 3444443333333343322 2233222221 111345788899999999999999999
Q ss_pred cccCChHHHHHHHHcCCE
Q 040734 281 GVFRNPGAVTKIKESKLS 298 (361)
Q Consensus 281 ~~~~~~~~v~~~~~~Gl~ 298 (361)
.+--+++|.+.+.++|+.
T Consensus 84 FLSEn~~Fa~~~~~agi~ 101 (114)
T d2j9ga2 84 FLSENANFAEQVERSGFI 101 (114)
T ss_dssp TTTTCHHHHHHHHHTTCE
T ss_pred hhhhhHHHHHHHHHCCCE
Confidence 887899999999999973
No 17
>d1vrda1 c.1.5.1 (A:1-85,A:213-457) Inosine monophosphate dehydrogenase (IMPDH) {Thermotoga maritima [TaxId: 2336]}
Probab=68.01 E-value=9.6 Score=33.14 Aligned_cols=88 Identities=13% Similarity=0.158 Sum_probs=57.3
Q ss_pred HHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcc----------------ccCChHHHH
Q 040734 227 DAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKG----------------VFRNPGAVT 290 (361)
Q Consensus 227 ~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~----------------~~~~~~~v~ 290 (361)
+.++.+|+..|+.++..-.-. +.+. .+...+.|++++.+-... +...-+.-+
T Consensus 128 ~~ik~ik~~~~~~~viaGnV~-----------t~~~-a~~l~~~GaD~v~VGig~Gs~ctt~~~~G~g~p~~sai~~~~~ 195 (330)
T d1vrda1 128 ETLEMIKADYPDLPVVAGNVA-----------TPEG-TEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSE 195 (330)
T ss_dssp HHHHHHHHHCTTSCEEEEEEC-----------SHHH-HHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCEEeechh-----------HHHH-HHHHHHcCCCEEeeccccCccccccceeccccccchhHHHHHH
Confidence 457777888888877543321 2222 233346788877543211 000113444
Q ss_pred HHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 291 KIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 291 ~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
.++..+++|++-|-+.+..++.+.+ .+|.|+|+--.
T Consensus 196 ~~~~~~vpvIAdGGi~~~gdiakAl-a~GAd~Vm~Gs 231 (330)
T d1vrda1 196 VARKYDVPIIADGGIRYSGDIVKAL-AAGAESVMVGS 231 (330)
T ss_dssp HHHTTTCCEEEESCCCSHHHHHHHH-HTTCSEEEESH
T ss_pred HHHhcCceEEecCCcccCCchheee-eccCceeeecc
Confidence 5678889999999999999999997 69999999654
No 18
>d1yxya1 c.1.2.5 (A:4-233) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Streptococcus pyogenes [TaxId: 1314]}
Probab=67.13 E-value=27 Score=27.57 Aligned_cols=44 Identities=18% Similarity=0.432 Sum_probs=36.0
Q ss_pred HHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeC----ChHHH
Q 040734 287 GAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD----LVQEI 331 (361)
Q Consensus 287 ~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD----~p~~~ 331 (361)
......+..++.|.+=|-+.+++++.+++ .+|+|+|+.- +|+.+
T Consensus 174 ~~~~~~~~~~ipvia~GGI~t~~d~~~al-~~GAd~V~vGsAi~~p~~i 221 (230)
T d1yxya1 174 ALIEALCKAGIAVIAEGKIHSPEEAKKIN-DLGVAGIVVGGAITRPKEI 221 (230)
T ss_dssp HHHHHHHHTTCCEEEESCCCSHHHHHHHH-TTCCSEEEECHHHHCHHHH
T ss_pred HHHHHHhcCCCeEEEeCCCCCHHHHHHHH-HcCCCEEEEChhhcCHHHH
Confidence 45556667899999988899999999987 6999999987 56655
No 19
>d1ulza2 c.30.1.1 (A:1-114) Biotin carboxylase (BC), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=66.72 E-value=9.5 Score=27.79 Aligned_cols=99 Identities=10% Similarity=0.035 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCc
Q 040734 201 RVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVK 280 (361)
Q Consensus 201 ~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~ 280 (361)
.++-+++...++.+.. -|.+.|-....-.+++..+ ..++..... .-.+...+..++.+++.+++.+++.|.
T Consensus 12 EiA~Ri~ra~~elgi~-tvav~s~~D~~s~~~~~ad----~~~~ig~~~----~~sYln~~~Ii~~A~~~~~daihPGyG 82 (114)
T d1ulza2 12 EIAVRIIRACKELGIP-TVAIYNEVESTARHVKLAD----EAYMIGTDP----LDTYLNKQRIINLALEVGADAIHPGYG 82 (114)
T ss_dssp HHHHHHHHHHHHHTCC-EEEEECGGGTTCHHHHHSS----EEEECCSST----THHHHCHHHHHHHHHHTTCCEEECCSS
T ss_pred HHHHHHHHHHHHhcCC-eEEEecchhhcCcchhhcc----eeeecCCCh----hhhhhcHHHHHHHHHHhCCCeEecchh
Confidence 4566777888888764 4555554444444444432 122222211 011234677889999999999999999
Q ss_pred cccCChHHHHHHHHcCCEEEEeccCCCHHHHH
Q 040734 281 GVFRNPGAVTKIKESKLSLLTYGRLNNVAEAV 312 (361)
Q Consensus 281 ~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~ 312 (361)
.+.-+++|.+.+.++|+ +| .==+++.++
T Consensus 83 FLSEna~Fa~~~~~~gi---~F-IGP~~~~i~ 110 (114)
T d1ulza2 83 FLAENAEFAKMCEEAGI---TF-IGPHWKVIE 110 (114)
T ss_dssp TTTTCHHHHHHHHHTTC---EE-SSSCHHHHH
T ss_pred hhhhHHHHHHHHHHCCC---EE-ECcCHHHHH
Confidence 88889999999999997 56 333444443
No 20
>d1wa3a1 c.1.10.1 (A:2-203) KDPG aldolase {Thermotoga maritima [TaxId: 2336]}
Probab=66.06 E-value=16 Score=29.24 Aligned_cols=118 Identities=19% Similarity=0.039 Sum_probs=72.8
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCH---HHHHHHHH-HCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcC
Q 040734 203 IQAILKIVFEFAENRPIIFSTFQP---DAAVLIRK-LQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSE 278 (361)
Q Consensus 203 v~~vl~~l~~~~~~~rv~~~Sf~~---~~l~~l~~-~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~ 278 (361)
+..+.+.+.+.+.. -+-+.--++ +.++.+++ ..|++.++.-+-. + .+.++.+...|+..+..+
T Consensus 23 a~~~~~al~~~Gi~-~iEitlr~p~a~~~i~~l~~~~~~~~~vGaGTV~-----------~-~~~~~~a~~aGa~fivsP 89 (202)
T d1wa3a1 23 AKEKALAVFEGGVH-LIEITFTVPDADTVIKELSFLKEKGAIIGAGTVT-----------S-VEQCRKAVESGAEFIVSP 89 (202)
T ss_dssp HHHHHHHHHHTTCC-EEEEETTSTTHHHHHHHTHHHHHTTCEEEEESCC-----------S-HHHHHHHHHHTCSEEECS
T ss_pred HHHHHHHHHHcCCC-EEEEecCCccHHHHHHHHHHhcCCCcEEEecccc-----------c-HHHHHHHHhhcccEEeCC
Confidence 44555555555542 222322233 44455443 4477766653321 1 233455678899887754
Q ss_pred CccccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHHHH--HHHHHhcCC
Q 040734 279 VKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEIT--EAVYDMIKP 341 (361)
Q Consensus 279 ~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~--~~l~~~~~~ 341 (361)
. .++++++.++++|+.++.= +-++.|+...+ +.|++.+- =+|..+. ++++.+..|
T Consensus 90 ~----~~~~v~~~~~~~~i~~iPG--v~TpsEi~~A~-~~G~~~lK-~fPa~~~G~~~lk~l~~p 146 (202)
T d1wa3a1 90 H----LDEEISQFCKEKGVFYMPG--VMTPTELVKAM-KLGHTILK-LFPGEVVGPQFVKAMKGP 146 (202)
T ss_dssp S----CCHHHHHHHHHHTCEEECE--ECSHHHHHHHH-HTTCCEEE-ETTHHHHHHHHHHHHHTT
T ss_pred C----CcHHHHHHHHhcCCceeCC--cCcHHHHHHHH-HCCCCEEE-ecchhhcCHHHHHHHhCc
Confidence 3 2789999999999988765 56788888886 69999665 4776663 466665544
No 21
>d1ujpa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Thermus thermophilus [TaxId: 274]}
Probab=65.81 E-value=13 Score=31.38 Aligned_cols=107 Identities=18% Similarity=0.209 Sum_probs=57.8
Q ss_pred HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccC
Q 040734 226 PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRL 305 (361)
Q Consensus 226 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tv 305 (361)
.+.++.+|+. .+.|+.+++.... +....++..++.+...|++++.+.---.--..++.+.++++|+..+..-+.
T Consensus 80 ~~~~~~~r~~-~~~pivlm~Y~N~-----i~~~G~~~F~~~~~~aGvdGliipDLP~ee~~~~~~~~~~~gl~~I~lvsP 153 (271)
T d1ujpa_ 80 LELVREVRAL-TEKPLFLMTYLNP-----VLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAP 153 (271)
T ss_dssp HHHHHHHHHH-CCSCEEEECCHHH-----HHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECT
T ss_pred HHHHHHHhcc-cCCcEEEEeechh-----hhhCCchhHhHHHhhcCceeEeccchhhhhHHHHHHHhhccccceeeccCC
Confidence 3456666655 4678887764321 112346677788889999998755321112468889999999998754355
Q ss_pred CCHH-HHHHHHH----------hcCccEEEeCChHHHHHHHHHh
Q 040734 306 NNVA-EAVYMQH----------LMGIDGVIVDLVQEITEAVYDM 338 (361)
Q Consensus 306 n~~~-~~~~~~~----------~~GVdgI~TD~p~~~~~~l~~~ 338 (361)
++++ .+.+... ..||.|.-+..+..+.+++++.
T Consensus 154 tT~~eRi~~i~~~s~GFIY~Vs~~GvTG~~~~~~~~~~~~i~~i 197 (271)
T d1ujpa_ 154 TSTDARIATVVRHATGFVYAVSVTGVTGMRERLPEEVKDLVRRI 197 (271)
T ss_dssp TCCHHHHHHHHTTCCSCEEEECC------------CCHHHHHHH
T ss_pred CcchHHHHHHHHhCcchhhhhcccCccCccccchHHHHHHHHhh
Confidence 5444 3444321 1567777666666666665553
No 22
>d1dxea_ c.1.12.5 (A:) 2-dehydro-3-deoxy-galactarate aldolase {Escherichia coli [TaxId: 562]}
Probab=64.11 E-value=15 Score=30.44 Aligned_cols=74 Identities=14% Similarity=0.056 Sum_probs=50.3
Q ss_pred HHHHHHhcCCcEEEcCCccccCC----hHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEe---CChHHHHHHH
Q 040734 263 AVKVCLEGGLQGIVSEVKGVFRN----PGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIV---DLVQEITEAV 335 (361)
Q Consensus 263 ~~~~~~~~~~~~i~~~~~~~~~~----~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T---D~p~~~~~~l 335 (361)
..+.+-..|++++.++...-..+ ..+++.++..|+..++=-.-+++..+.+++ ++|++||+. +.++.+.+++
T Consensus 29 ~~ei~a~~G~Dfv~iD~EHg~~~~~~~~~~i~a~~~~g~~~~VRvp~~~~~~i~~~L-D~Ga~GIivP~v~s~eea~~~v 107 (253)
T d1dxea_ 29 STEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPTNEPVIIKRLL-DIGFYNFLIPFVETKEEAELAV 107 (253)
T ss_dssp HHHHHTTSCCSEEEEESSSSSCCHHHHHHHHHHTTTCSSEEEEECSSSCHHHHHHHH-HTTCCEEEESCCCSHHHHHHHH
T ss_pred HHHHHHcCCCCEEEEecccCCCChhHHHHHHHHHhccCCCceecCCCCCHHHHHHHH-hcCccEEEecccCCHHHHHHHH
Confidence 34555567788777765542223 467777788888877652346777888887 799999985 6666666666
Q ss_pred HH
Q 040734 336 YD 337 (361)
Q Consensus 336 ~~ 337 (361)
+.
T Consensus 108 ~~ 109 (253)
T d1dxea_ 108 AS 109 (253)
T ss_dssp HT
T ss_pred Hh
Confidence 64
No 23
>d1vkfa_ c.1.29.1 (A:) Glycerol uptake operon antiterminator-related protein TM1436 {Thermotoga maritima [TaxId: 2336]}
Probab=63.36 E-value=14 Score=28.94 Aligned_cols=139 Identities=12% Similarity=0.098 Sum_probs=90.9
Q ss_pred cCCcccCHHHHHHhCC---CCceEEEEEecC-CccchhhhHHHHHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHC-
Q 040734 162 IDDSLCTLQEAFQQVD---PNVGFNVELKFD-DHIVYEQDYLIRVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQ- 236 (361)
Q Consensus 162 ~~~~iptL~EvL~~~~---~~~~l~iEiK~~-~~~~~~~~~~~~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~- 236 (361)
....|..|.++.+.++ +.+.+++|+=.. +.+ .. -++.+++++. . =+.|-....++..++.-
T Consensus 26 L~g~I~~l~~~v~~~k~~gK~v~VHiDLi~GL~~d--------~~---av~flk~~~~--d-GIISTk~~~i~~Ak~~Gl 91 (172)
T d1vkfa_ 26 LKSDILNLKFHLKILKDRGKTVFVDMDFVNGLGEG--------EE---AILFVKKAGA--D-GIITIKPKNYVVAKKNGI 91 (172)
T ss_dssp CCEETTTHHHHHHHHHHTTCEEEEEGGGEETCCSS--------HH---HHHHHHHHTC--S-EEEESCHHHHHHHHHTTC
T ss_pred ecCcHHHHHHHHHHHHHcCCEEEEEeeecCCCCCC--------HH---HHHHHHHcCC--C-EEEECCHHHHHHHHHcCC
Confidence 4466889999998886 356777776543 121 11 2333444532 2 33456788888888752
Q ss_pred CCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHH
Q 040734 237 STYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQH 316 (361)
Q Consensus 237 p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~ 316 (361)
..+.+.|+.+. .+++...+..+..+++.+-+-... +.|..++++ .+.++++=|-+.+.++....+
T Consensus 92 ~tIqR~FliDS----------~al~~~~~~i~~~~PD~IEiLPG~--i~p~ii~~~--~~~piIAGGLI~~~edv~~al- 156 (172)
T d1vkfa_ 92 PAVLRFFALDS----------KAVERGIEQIETLGVDVVEVLPGA--VAPKVARKI--PGRTVIAAGLVETEEEAREIL- 156 (172)
T ss_dssp CEEEEEECCSH----------HHHHHHHHHHHHHTCSEEEEESGG--GHHHHHTTS--TTSEEEEESCCCSHHHHHHHT-
T ss_pred eEEEEEEeeeh----------HHHHHHHHHHhhcCCCEEEECCch--hhHHHHHHh--cCCCEEeeCCcCCHHHHHHHH-
Confidence 33455666543 457788888888888876543332 246776665 356899988899999998887
Q ss_pred hcCccEEEeCChHH
Q 040734 317 LMGIDGVIVDLVQE 330 (361)
Q Consensus 317 ~~GVdgI~TD~p~~ 330 (361)
..| .+|.|-..+.
T Consensus 157 ~~g-~aVSTS~~~L 169 (172)
T d1vkfa_ 157 KHV-SAISTSSRIL 169 (172)
T ss_dssp TTS-SEEEECCHHH
T ss_pred hcC-eEEECCChHH
Confidence 455 5999987764
No 24
>d1qopa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Salmonella typhimurium [TaxId: 90371]}
Probab=63.06 E-value=11 Score=31.80 Aligned_cols=107 Identities=12% Similarity=0.100 Sum_probs=64.8
Q ss_pred HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccC
Q 040734 226 PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRL 305 (361)
Q Consensus 226 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tv 305 (361)
.+.++.+++..+..|+.++..... +....+++.++.++..|++|+.+.---.--..++.+.++++|+..+..-+.
T Consensus 82 ~~~~~~~r~~~~~~pivlm~Y~N~-----i~~~G~~~f~~~~~~~Gv~GliipDlP~ee~~~~~~~~~~~~l~~I~lvaP 156 (267)
T d1qopa_ 82 FEMLAIIREKHPTIPIGLLMYANL-----VFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPP 156 (267)
T ss_dssp HHHHHHHHHHCSSSCEEEEECHHH-----HHTTCHHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEECT
T ss_pred hhhhhhhcccccccceEEEeeccc-----hhhcCchHHHHHHHhcCCCceeccchhhhhhHHHHHhhhccCceEEEEecc
Confidence 345667778878889887764321 122346777788889999987754321123568888999999988765355
Q ss_pred CCHHH-HHHHHH----------hcCccEEEeCChHHHHHHHHH
Q 040734 306 NNVAE-AVYMQH----------LMGIDGVIVDLVQEITEAVYD 337 (361)
Q Consensus 306 n~~~~-~~~~~~----------~~GVdgI~TD~p~~~~~~l~~ 337 (361)
+++.+ +.+... ..||-|.-+..+..+.+++++
T Consensus 157 tt~~~Ri~~i~~~a~gFiY~vs~~GvTG~~~~~~~~~~~~i~~ 199 (267)
T d1qopa_ 157 NADDDLLRQVASYGRGYTYLLSRSGVTGAENRGALPLHHLIEK 199 (267)
T ss_dssp TCCHHHHHHHHHHCCSCEEEESSSSCCCSSSCC--CCHHHHHH
T ss_pred cccHHHHHHHHhhCchhhhhhcccccCCcccccchhHHHHHHH
Confidence 55443 544332 146666555555544444443
No 25
>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=60.96 E-value=18 Score=26.82 Aligned_cols=54 Identities=19% Similarity=0.185 Sum_probs=41.7
Q ss_pred ChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCC-hHHHHHHHHHhc
Q 040734 285 NPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL-VQEITEAVYDMI 339 (361)
Q Consensus 285 ~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~-p~~~~~~l~~~~ 339 (361)
.++.|+.++++|++++.- |-++.....++...+|++-++.+. |..-.+++++..
T Consensus 26 a~~~I~~L~~~Gi~v~il-TGD~~~~a~~ia~~lgI~~v~~~~~p~~k~~~v~~~q 80 (135)
T d2b8ea1 26 AKPAVQELKRMGIKVGMI-TGDNWRSAEAISRELNLDLVIAEVLPHQKSEEVKKLQ 80 (135)
T ss_dssp HHHHHHHHHHTTCEEEEE-CSSCHHHHHHHHHHHTCSEEECSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCEEEEE-cCcchhhhhHHHhhhhhhhhccccchhHHHHHHHHHH
Confidence 357899999999999999 888888887776679999999876 444445555543
No 26
>d2ptda_ c.1.18.2 (A:) Phosphatidylinositol-specific phospholipase C {Bacillus cereus [TaxId: 1396]}
Probab=58.10 E-value=3.6 Score=34.86 Aligned_cols=31 Identities=16% Similarity=0.195 Sum_probs=28.3
Q ss_pred HHHHHHHhCCCCEEEEeeeeecCCcEEEEcC
Q 040734 76 ASFNSSAKYPLDFIEFDVQVTKDGWPVIFHD 106 (361)
Q Consensus 76 ~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD 106 (361)
.++...++.|+.++++||+...++.++++|.
T Consensus 53 ~~i~~QL~~GvR~fDlrv~~~~~~~~~~~Hg 83 (296)
T d2ptda_ 53 YDFRYQMDHGARIFDIRGRLTDDNTIVLHHG 83 (296)
T ss_dssp SCHHHHHTTTCCEEEEEEEECTTSCEEEEET
T ss_pred chHHHHHHhCCcEEEEeeeecCCCceEEEeC
Confidence 4678889999999999999999999999995
No 27
>d1zfja1 c.1.5.1 (A:2-94,A:221-492) Inosine monophosphate dehydrogenase (IMPDH) {Streptococcus pyogenes [TaxId: 1314]}
Probab=54.20 E-value=58 Score=28.25 Aligned_cols=90 Identities=12% Similarity=0.090 Sum_probs=57.8
Q ss_pred HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcc--ccC--------C------hHHH
Q 040734 226 PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKG--VFR--------N------PGAV 289 (361)
Q Consensus 226 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~--~~~--------~------~~~v 289 (361)
.+.++.+|+..|+.++..-.-. +.+.+.. +...|++++-+.... .-. . .+..
T Consensus 136 ~~~i~~ik~~~~~~~iIaGNV~-----------T~e~a~~-L~~aGaD~VkVGiG~Gs~CTTr~~tGvGvPq~sai~~~~ 203 (365)
T d1zfja1 136 LRKIAEIRAHFPNRTLIAGNIA-----------TAEGARA-LYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAA 203 (365)
T ss_dssp HHHHHHHHHHCSSSCEEEEEEC-----------SHHHHHH-HHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHH
T ss_pred hHHHHHHHhhCCCcceeecccc-----------cHHHHHH-HHhcCCceEEeeecccccccCcceeeeeccchhHHHHHH
Confidence 3567777777888776543211 2333333 346777776443311 000 0 1334
Q ss_pred HHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCCh
Q 040734 290 TKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLV 328 (361)
Q Consensus 290 ~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p 328 (361)
+..++.|.+|++-|-+.+..++.+.+ .+|.|+||--.+
T Consensus 204 ~~~~~~~~~iIADGGi~~~GDi~KAl-a~GAd~VMlG~~ 241 (365)
T d1zfja1 204 AVAREYGKTIIADGGIKYSGDIVKAL-AAGGNAVMLGSM 241 (365)
T ss_dssp HHHHHTTCEEEEESCCCSHHHHHHHH-HTTCSEEEESTT
T ss_pred HHHHhCCceEEecCCcCcchhhhhhh-hccCCEEEecch
Confidence 55688899999999999999999997 799999997653
No 28
>d7reqb2 c.23.6.1 (B:476-638) Methylmalonyl-CoA mutase beta subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}
Probab=53.73 E-value=6.6 Score=30.53 Aligned_cols=53 Identities=13% Similarity=0.131 Sum_probs=35.1
Q ss_pred hHHHHHHHHcCCEEE--EeccCCCHHHHHHHHHhcCccEEE---eCChHHHHHHHHHhcC
Q 040734 286 PGAVTKIKESKLSLL--TYGRLNNVAEAVYMQHLMGIDGVI---VDLVQEITEAVYDMIK 340 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~--~w~Tvn~~~~~~~~~~~~GVdgI~---TD~p~~~~~~l~~~~~ 340 (361)
+++++.++++|.... +. -.....+...+. +.|||+++ ||-.+.+.+++++++.
T Consensus 104 ~~~~~aLk~ag~~~~vlaG-g~~~~~d~~~l~-~aGVd~~i~~G~d~~~~l~~l~~~lGv 161 (163)
T d7reqb2 104 LEVAKALKAAGAKALYLSG-AFKEFGDDAAEA-EKLIDGRLFMGMDVVDTLSSTLDILGV 161 (163)
T ss_dssp HHHHHHHHHTTCSEEEEES-CGGGGGGGHHHH-HHHCCEEECTTCCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcccceeEEEe-cCCCcccHHHHH-hCCCCeEecCCCcHHHHHHHHHHHhcC
Confidence 688899999886543 33 233344454553 68999999 4666777777776654
No 29
>d1vhna_ c.1.4.1 (A:) Putative flavin oxidoreducatase TM0096 {Thermotoga maritima [TaxId: 2336]}
Probab=53.28 E-value=21 Score=30.31 Aligned_cols=76 Identities=16% Similarity=0.217 Sum_probs=53.5
Q ss_pred HHHHHHHHHhcCCcEEEcCCccc------cCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCC-----h
Q 040734 260 LEEAVKVCLEGGLQGIVSEVKGV------FRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL-----V 328 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~~~------~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~-----p 328 (361)
..+.+......|+..+.++.+.- ..+-+.|..+++ .+.|++.|-+.+.+++.+++...||||||.-+ |
T Consensus 138 ~~~~~~~l~~~G~~~itvH~Rt~~q~~~~~a~~~~i~~~~~-~ipvi~NGdI~s~~d~~~~l~~tg~dgVMiGRgal~nP 216 (305)
T d1vhna_ 138 VEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK-RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRP 216 (305)
T ss_dssp HHHHHHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCC-SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTTCT
T ss_pred hhHHHHHHHHhCCcEEEechhhhhhccccchhhhHHHhhhh-hhhhhcccccccHHHHHHHHHhcCCCeEehhHHHHHhh
Confidence 34555666778998887776542 112355666655 59999999999999999887557999999854 6
Q ss_pred HHHHHHHH
Q 040734 329 QEITEAVY 336 (361)
Q Consensus 329 ~~~~~~l~ 336 (361)
-.+.++.+
T Consensus 217 ~if~~i~~ 224 (305)
T d1vhna_ 217 WIFKQIKD 224 (305)
T ss_dssp THHHHHHH
T ss_pred hHhhhhhh
Confidence 66665543
No 30
>d1eepa_ c.1.5.1 (A:) Inosine monophosphate dehydrogenase (IMPDH) {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]}
Probab=50.89 E-value=52 Score=28.76 Aligned_cols=99 Identities=9% Similarity=0.067 Sum_probs=64.6
Q ss_pred CCEEEEcCC------HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccC------
Q 040734 217 RPIIFSTFQ------PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFR------ 284 (361)
Q Consensus 217 ~rv~~~Sf~------~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~------ 284 (361)
+-+++.+-+ .+.++++++.+|++++..-.-. +.+.+..+. ..|++++-+-..---+
T Consensus 165 D~ivID~AhG~s~~~~~~i~~ik~~~~~v~vIaGNV~-----------T~e~a~~L~-~~GaD~VkVGiGpGs~CtTr~~ 232 (388)
T d1eepa_ 165 DILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNIV-----------TKEAALDLI-SVGADCLKVGIGPGSICTTRIV 232 (388)
T ss_dssp SEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEEC-----------SHHHHHHHH-TTTCSEEEECSSCSTTSHHHHH
T ss_pred ceeeeeccccchHHHHHHHHHHHHHCCCCceeecccc-----------CHHHHHHHH-hcCCCeeeeccccccccccccc
Confidence 445555443 5677888888898887543211 234444444 6788877443321000
Q ss_pred ----------ChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCCh
Q 040734 285 ----------NPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLV 328 (361)
Q Consensus 285 ----------~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p 328 (361)
-.+..+..+..+.+|++-|-+.+..++.+.+ .+|.|.||-..+
T Consensus 233 ~GvG~pq~sai~~~~~~~~~~~vpiIADGGi~~~Gdi~KAl-a~GAd~VMlG~~ 285 (388)
T d1eepa_ 233 AGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAI-AAGADSVMIGNL 285 (388)
T ss_dssp HCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHH-HHTCSEEEECHH
T ss_pred cccCcchHHHHHHHHHHhccCCceEEeccccCcCCceeeeE-Eeccceeecchh
Confidence 1134555677789999999999999999997 699999997654
No 31
>d1i3ca_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Synechocystis sp. PCC 6803, RCP1 [TaxId: 1148]}
Probab=50.85 E-value=42 Score=24.56 Aligned_cols=48 Identities=8% Similarity=0.236 Sum_probs=31.4
Q ss_pred HHHHHHHHc----CCEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHHH
Q 040734 287 GAVTKIKES----KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEAV 335 (361)
Q Consensus 287 ~~v~~~~~~----Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l 335 (361)
++++++++. .++|++.++-++.....+++ .+|++++++= .+..+.+.+
T Consensus 73 el~~~ir~~~~~~~iPvi~lT~~~~~~~~~~a~-~~Ga~~yl~KP~~~~~L~~~i 126 (144)
T d1i3ca_ 73 EVLAEIKQNPDLKRIPVVVLTTSHNEDDVIASY-ELHVNCYLTKSRNLKDLFKMV 126 (144)
T ss_dssp HHHHHHHHCTTTTTSCEEEEESCCCHHHHHHHH-HTTCSEEEECCSSHHHHHHHH
T ss_pred HHHHHHHhCcccCCCeEEEEECCCCHHHHHHHH-HCCCCEEEECCCCHHHHHHHH
Confidence 666777653 46788884456666677776 6999999973 334443333
No 32
>d1jbea_ c.23.1.1 (A:) CheY protein {Escherichia coli [TaxId: 562]}
Probab=49.67 E-value=35 Score=24.42 Aligned_cols=48 Identities=17% Similarity=0.239 Sum_probs=29.7
Q ss_pred HHHHHHHH----cCCEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHHH
Q 040734 287 GAVTKIKE----SKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEAV 335 (361)
Q Consensus 287 ~~v~~~~~----~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l 335 (361)
++++.+++ .+++|+.-+.-++.....+++ ..|++++++= .+..+.+.+
T Consensus 66 el~~~ir~~~~~~~~piI~lt~~~~~~~~~~a~-~~G~~~~l~KP~~~~~L~~~l 119 (128)
T d1jbea_ 66 ELLKTIRADGAMSALPVLMVTAEAKKENIIAAA-QAGASGYVVKPFTAATLEEKL 119 (128)
T ss_dssp HHHHHHHC--CCTTCCEEEEESSCCHHHHHHHH-HTTCSEEEESSCCHHHHHHHH
T ss_pred HHHHHHHhCccCCCCcEEEEECcCCHHHHHHHH-HCCCCEEEECCCCHHHHHHHH
Confidence 55666654 346777773455666666776 6999999874 344444433
No 33
>d1jr1a1 c.1.5.1 (A:17-112,A:233-514) Inosine monophosphate dehydrogenase (IMPDH) {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=48.19 E-value=50 Score=28.81 Aligned_cols=90 Identities=9% Similarity=0.074 Sum_probs=58.6
Q ss_pred HHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCcccc--C--------------ChHHH
Q 040734 226 PDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVF--R--------------NPGAV 289 (361)
Q Consensus 226 ~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~--~--------------~~~~v 289 (361)
.+.++.+++..|+.++..-.-. +.+.+..+ .+.|++++.+....-- . -.+.-
T Consensus 148 ~~~i~~ik~~~~~~~iIaGnVa-----------T~e~a~~L-~~aGAD~VkVGiG~Gs~ctTr~~tGvG~pq~sai~~~~ 215 (378)
T d1jr1a1 148 INMIKYMKEKYPNLQVIGGNVV-----------TAAQAKNL-IDAGVDALRVGMGCGSICITQEVLACGRPQATAVYKVS 215 (378)
T ss_dssp HHHHHHHHHHSTTCEEEEEEEC-----------SHHHHHHH-HHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCceeecccc-----------cHHHHHHH-HHhCCCEEeeccccccccccccccccCcccchhhhHHH
Confidence 3556778888888877543321 23333333 3678887754332100 0 01344
Q ss_pred HHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCCh
Q 040734 290 TKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLV 328 (361)
Q Consensus 290 ~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p 328 (361)
+.+++.+++|++-|-+.+..++.+.+ .+|.|+||--.+
T Consensus 216 ~~a~~~~vpIIADGGi~~~gdiakAl-a~GAd~VMmGs~ 253 (378)
T d1jr1a1 216 EYARRFGVPVIADGGIQNVGHIAKAL-ALGASTVMMGSL 253 (378)
T ss_dssp HHHGGGTCCEEEESCCCSHHHHHHHH-HTTCSEEEESTT
T ss_pred HhhcccCCceecccccccCCceeeEE-Eeecceeeecce
Confidence 55677899999999999999999997 799999996553
No 34
>d1piia2 c.1.2.4 (A:1-254) Indole-3-glycerophosphate synthase, IPGS {Escherichia coli [TaxId: 562]}
Probab=47.68 E-value=63 Score=26.51 Aligned_cols=160 Identities=11% Similarity=0.056 Sum_probs=92.6
Q ss_pred CHHHHHHhCCCCceEEEEEecCCccc--h-hhhHHHHHHHHHHHHHHHhcCCCCEEEE------cCCHHHHHHHHHHCCC
Q 040734 168 TLQEAFQQVDPNVGFNVELKFDDHIV--Y-EQDYLIRVIQAILKIVFEFAENRPIIFS------TFQPDAAVLIRKLQST 238 (361)
Q Consensus 168 tL~EvL~~~~~~~~l~iEiK~~~~~~--~-~~~~~~~~v~~vl~~l~~~~~~~rv~~~------Sf~~~~l~~l~~~~p~ 238 (361)
.|.+.|. .++..++-|+|..+|.. . ... . ...+.+ ..+.| ..-+-+- .-+.+.++.+++.. +
T Consensus 38 ~f~~aL~--~~~~~iIAEiKraSPSkG~i~~~~---~-p~~~a~-~~~~g-A~aiSVLTe~~~F~Gs~~~l~~v~~~~-~ 108 (254)
T d1piia2 38 HFYDALQ--GARTAFILECKKASPSKGVIRDDF---D-PARIAA-IYKHY-ASAISVLTDEKYFQGSFNFLPIVSQIA-P 108 (254)
T ss_dssp CHHHHHC--SSSCEEEEEECSEETTTEESCSSC---C-HHHHHH-HHTTT-CSEEEEECCSTTTCCCTTHHHHHHHHC-C
T ss_pred CHHHHHh--cCCCceehhhhhcccchhhhcccc---h-hHHHHH-HHHhc-cCceEEecccccCCCCHHHHHHHHhcc-c
Confidence 5555553 35789999999865431 0 000 1 112233 22333 2111111 12456788888774 4
Q ss_pred CCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccC--ChHHHHHHHHcCCEEEEeccCCCHHHHHHHHH
Q 040734 239 YPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFR--NPGAVTKIKESKLSLLTYGRLNNVAEAVYMQH 316 (361)
Q Consensus 239 ~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~--~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~ 316 (361)
+|+..- |+-... .-+..++.+|++.+.+-...+-. -.++++.+++.|+.+.+= |++.+++.+.+
T Consensus 109 ~PiLrK---------DFIid~--~QI~ear~~GADavLLI~~~L~~~~l~~l~~~a~~lgl~~LVE--vh~~~El~~a~- 174 (254)
T d1piia2 109 QPILCK---------DFIIDP--YQIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMGVLTE--VSNEEEQERAI- 174 (254)
T ss_dssp SCEEEE---------SCCCSH--HHHHHHHHTTCSEEEEETTTCCHHHHHHHHHHHHHTTCEEEEE--ECSHHHHHHHH-
T ss_pred cccchh---------cccCcH--HHHHHHHhhccchhhhhHhhhcccHHHHHHHHHHHHhhhHHHh--hccHHHHHHHH-
Confidence 676432 111111 12455778999988766655411 147888999999999887 78999999887
Q ss_pred hcCccEEEeCC---------hHHHHHHHHHhcCCcccccccCc
Q 040734 317 LMGIDGVIVDL---------VQEITEAVYDMIKPAKVVEKEDN 350 (361)
Q Consensus 317 ~~GVdgI~TD~---------p~~~~~~l~~~~~~~~~~~~~~~ 350 (361)
.+|.+-|-.|. +....+.............++|.
T Consensus 175 ~~~a~iIGINnRnL~tf~vd~~~t~~L~~~ip~~~~~VsESGI 217 (254)
T d1piia2 175 ALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGI 217 (254)
T ss_dssp HTTCSEEEEESEETTTTEECTHHHHHHHHHHCTTSEEEEESCC
T ss_pred hhcccccCccccchhhhhhhhHHHHHHHHhCCCCCEEEEcCCC
Confidence 58887766554 45555566655554444444444
No 35
>d1qwga_ c.1.27.1 (A:) (2r)-phospho-3-sulfolactate synthase ComA {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=46.75 E-value=43 Score=27.55 Aligned_cols=67 Identities=16% Similarity=0.220 Sum_probs=47.2
Q ss_pred cHHHHHHHHHhcCCcEEEcCCccccCC----hHHHHHHHHcCCEEEEeccCC--------CHHH----HHHHHHhcCccE
Q 040734 259 SLEEAVKVCLEGGLQGIVSEVKGVFRN----PGAVTKIKESKLSLLTYGRLN--------NVAE----AVYMQHLMGIDG 322 (361)
Q Consensus 259 ~l~~~~~~~~~~~~~~i~~~~~~~~~~----~~~v~~~~~~Gl~v~~w~Tvn--------~~~~----~~~~~~~~GVdg 322 (361)
.+++.++.++.+|+..+-++-....++ .++|+.++++|++|..=--.. ++++ +++.+ +.|++.
T Consensus 86 ~~~~y~~~~~~lGf~~iEiSdg~~~i~~~~~~~~I~~~~~~G~~V~~EvG~K~~~~~~~~~~~~~i~~~~~~L-eaGA~~ 164 (251)
T d1qwga_ 86 KFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFMVLTEVGKKMPDKDKQLTIDDRIKLINFDL-DAGADY 164 (251)
T ss_dssp CHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEEECCSSHHHHTTCCHHHHHHHHHHHH-HHTCSE
T ss_pred CHHHHHHHHHHcCCCEEEEcCCccCCCHHHHHHHHHHHHhCCCEEeecccCCCCCCccccCHHHHHHHHHHHH-HCCCce
Confidence 477888999999999987776554333 388899999999997630111 2333 33344 589999
Q ss_pred EEeC
Q 040734 323 VIVD 326 (361)
Q Consensus 323 I~TD 326 (361)
||.+
T Consensus 165 ViiE 168 (251)
T d1qwga_ 165 VIIE 168 (251)
T ss_dssp EEEC
T ss_pred eEee
Confidence 9997
No 36
>d2pl1a1 c.23.1.1 (A:1-119) PhoP receiver domain {Escherichia coli [TaxId: 562]}
Probab=46.63 E-value=43 Score=23.54 Aligned_cols=38 Identities=13% Similarity=0.233 Sum_probs=25.6
Q ss_pred HHHHHHHHcC--CEEEEeccCCCHHHHHHHHHhcCccEEEe
Q 040734 287 GAVTKIKESK--LSLLTYGRLNNVAEAVYMQHLMGIDGVIV 325 (361)
Q Consensus 287 ~~v~~~~~~G--l~v~~w~Tvn~~~~~~~~~~~~GVdgI~T 325 (361)
++++.+++.+ .++.+-+.-++.+...+.+ ..|++++++
T Consensus 61 e~~~~i~~~~~~~pvi~lt~~~~~~~~~~a~-~~Ga~~yl~ 100 (119)
T d2pl1a1 61 SLIRRWRSNDVSLPILVLTARESWQDKVEVL-SAGADDYVT 100 (119)
T ss_dssp HHHHHHHHTTCCSCEEEEESCCCHHHHHHHH-HTTCSEEEE
T ss_pred HHHHHHHhcCcccceEeeeccCCHHHHHHHH-HcCCCEEEE
Confidence 5666666654 5677773445555566665 699999987
No 37
>d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}
Probab=46.02 E-value=26 Score=27.07 Aligned_cols=77 Identities=9% Similarity=0.063 Sum_probs=48.5
Q ss_pred cHHHHHHHHHhcCCcEEEcCCcc---ccCChHHHHHHHHcC---CEEEEeccCCCHHHHHHHHHhcCccEEEe---CChH
Q 040734 259 SLEEAVKVCLEGGLQGIVSEVKG---VFRNPGAVTKIKESK---LSLLTYGRLNNVAEAVYMQHLMGIDGVIV---DLVQ 329 (361)
Q Consensus 259 ~l~~~~~~~~~~~~~~i~~~~~~---~~~~~~~v~~~~~~G---l~v~~w~Tvn~~~~~~~~~~~~GVdgI~T---D~p~ 329 (361)
+.++.++.+.+.+++.+.++... ....+++++.++++| +.|++=|++ -+++...+. .+|||.|++ .-++
T Consensus 76 ~~e~iv~aa~~~~advI~iSs~~~~~~~~~~~l~~~L~~~g~~~v~VivGG~i-p~~d~~~l~-~~Gv~~iF~pgt~~~e 153 (168)
T d7reqa2 76 TPEETARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILITVGGVI-PEQDFDELR-KDGAVEIYTPGTVIPE 153 (168)
T ss_dssp CHHHHHHHHHHHTCSEEEEEECSSCHHHHHHHHHHHHHHTTCTTSEEEEEESC-CGGGHHHHH-HHTEEEEECTTCCHHH
T ss_pred cHHHHHHHHHccCCCEEEEecCcccchHHHHHHHHHHHhcCCCCeEEEEeCCC-CHHHHHHHH-hCCCCEEECcCCCHHH
Confidence 46677777878888776655321 112468899999998 556665433 334555564 699999995 3344
Q ss_pred HHHHHHHH
Q 040734 330 EITEAVYD 337 (361)
Q Consensus 330 ~~~~~l~~ 337 (361)
.+...+++
T Consensus 154 ~a~~~~~~ 161 (168)
T d7reqa2 154 SAISLVKK 161 (168)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444443
No 38
>d1vhca_ c.1.10.1 (A:) Hypothetical protein HI0047 {Haemophilus influenzae [TaxId: 727]}
Probab=46.00 E-value=67 Score=25.53 Aligned_cols=82 Identities=13% Similarity=0.119 Sum_probs=50.5
Q ss_pred HHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEe-CChHHHHHHHHH
Q 040734 261 EEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIV-DLVQEITEAVYD 337 (361)
Q Consensus 261 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T-D~p~~~~~~l~~ 337 (361)
....+.+...|+..+-+.++.- ..-+.++.++++ ++.|.+= ||-+.++++++. ++|++.++| ..-..+.++..+
T Consensus 29 ~~~~~al~~~Gi~~iEitl~~~-~a~~~I~~l~~~~p~~~vGaG-TV~~~~~~~~a~-~aGa~FivSP~~~~~v~~~a~~ 105 (212)
T d1vhca_ 29 LPLADTLAKNGLSVAEITFRSE-AAADAIRLLRANRPDFLIAAG-TVLTAEQVVLAK-SSGADFVVTPGLNPKIVKLCQD 105 (212)
T ss_dssp HHHHHHHHHTTCCEEEEETTST-THHHHHHHHHHHCTTCEEEEE-SCCSHHHHHHHH-HHTCSEEECSSCCHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEeCCCh-hHHHHHHHHHhcCCCceEeee-ecccHHHHHHHH-hhCCcEEECCCCCHHHHHHHHh
Confidence 3344555566776665444321 112556666543 4777777 888888888886 689998887 445556666666
Q ss_pred hcCCcccc
Q 040734 338 MIKPAKVV 345 (361)
Q Consensus 338 ~~~~~~~~ 345 (361)
+..|.-++
T Consensus 106 ~~i~~iPG 113 (212)
T d1vhca_ 106 LNFPITPG 113 (212)
T ss_dssp TTCCEECE
T ss_pred cCCCccCC
Confidence 55554444
No 39
>d1xm3a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Bacillus subtilis [TaxId: 1423]}
Probab=45.05 E-value=29 Score=28.52 Aligned_cols=136 Identities=15% Similarity=0.097 Sum_probs=78.4
Q ss_pred ccCHHHHHHhCC------CCceEEEEEecCCccchhhhHHHHHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCC
Q 040734 166 LCTLQEAFQQVD------PNVGFNVELKFDDHIVYEQDYLIRVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTY 239 (361)
Q Consensus 166 iptL~EvL~~~~------~~~~l~iEiK~~~~~~~~~~~~~~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~ 239 (361)
--|-+|++.... ..-++-||+=.++..-++ +....+++.-.+++ .|+ .-.-+++-|+..+++|.+.--..
T Consensus 74 c~tA~EAvr~A~lARE~~~t~~IKLEVi~D~~~L~P--D~~etl~Aae~Lv~-eGF-~VlpY~~~D~v~ak~Le~~Gc~a 149 (251)
T d1xm3a_ 74 ASTAEEAVRIARLAKASGLCDMIKVEVIGCSRSLLP--DPVETLKASEQLLE-EGF-IVLPYTSDDVVLARKLEELGVHA 149 (251)
T ss_dssp CSSHHHHHHHHHHHHHTTCCSSEEECCBCCTTTCCB--CHHHHHHHHHHHHH-TTC-CEEEEECSCHHHHHHHHHHTCSC
T ss_pred HhhHHHHHHHHHHHHHhcCCceEEEEEecCCCCcCC--CHHHHHHHHHHHHh-CCc-EEEEecCCCHHHHHHHHHcCChh
Confidence 445666665543 234777888654321111 11234444434443 343 23346677888888887763221
Q ss_pred CEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHH-HcCCEEEEeccCCCHHHHHHHHHhc
Q 040734 240 PVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIK-ESKLSLLTYGRLNNVAEAVYMQHLM 318 (361)
Q Consensus 240 ~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~-~~Gl~v~~w~Tvn~~~~~~~~~~~~ 318 (361)
++-+-.. .| ...=+.++..++.+. +..+.|++-..+..+.+..+.+ ++
T Consensus 150 -vMPlgsP----------------------IG-------Sg~Gl~n~~~l~~i~~~~~vPvIvDAGIG~pSdAa~AM-El 198 (251)
T d1xm3a_ 150 -IMPGASP----------------------IG-------SGQGILNPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAM-EL 198 (251)
T ss_dssp -BEECSSS----------------------TT-------CCCCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHH-HT
T ss_pred -HHHhhhh----------------------hh-------cCCCcCChHHHHHHHhcCCccEEEecCCCCHHHHHHHH-Hc
Confidence 1111100 00 001134788888775 5678888887799999999987 69
Q ss_pred CccEEEeC-------ChHHHHHHHH
Q 040734 319 GIDGVIVD-------LVQEITEAVY 336 (361)
Q Consensus 319 GVdgI~TD-------~p~~~~~~l~ 336 (361)
|+|+|..| +|..+.++++
T Consensus 199 G~daVLvNTAIA~a~dPv~MA~A~~ 223 (251)
T d1xm3a_ 199 GADGVLLNTAVSGADDPVKMARAMK 223 (251)
T ss_dssp TCSEEEESHHHHTSSSHHHHHHHHH
T ss_pred cCCEEEechhhhcCCCHHHHHHHHH
Confidence 99999987 4666665544
No 40
>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=43.91 E-value=47 Score=23.20 Aligned_cols=49 Identities=14% Similarity=0.215 Sum_probs=27.8
Q ss_pred HHHHHHHHcC-CEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHHHH
Q 040734 287 GAVTKIKESK-LSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEAVY 336 (361)
Q Consensus 287 ~~v~~~~~~G-l~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~ 336 (361)
++++.+++.. ++|.+-++-++.....+.+ ..|++++++= .++.+...++
T Consensus 61 ~~~~~i~~~~~~pvI~lt~~~~~~~~~~a~-~~Ga~d~l~KP~~~~~L~~~i~ 112 (117)
T d2a9pa1 61 EVAKTIRKTSSVPILMLSAKDSEFDKVIGL-ELGADDYVTKPFSNRELQARVK 112 (117)
T ss_dssp HHHHHHHTTCCCCEEEEESCCSHHHHHHHH-HHTCSEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHhCCCCCEEEEecCCCHHHHHHHH-HcCCCEEEECCCCHHHHHHHHH
Confidence 3444444333 6677773445555555665 6999998874 3444444443
No 41
>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]}
Probab=43.43 E-value=49 Score=23.24 Aligned_cols=49 Identities=12% Similarity=0.158 Sum_probs=30.5
Q ss_pred HHHHHHHHc----CCEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHHHH
Q 040734 287 GAVTKIKES----KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEAVY 336 (361)
Q Consensus 287 ~~v~~~~~~----Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~ 336 (361)
++++.+++. .++|.+.+..++.....+++ ..|++++++= .+..+...++
T Consensus 61 ~l~~~lr~~~~~~~~pvi~lt~~~~~~~~~~~~-~~G~~d~l~KP~~~~~L~~~v~ 115 (121)
T d1zesa1 61 QFIKHLKRESMTRDIPVVMLTARGEEEDRVRGL-ETGADDYITKPFSPKELVARIK 115 (121)
T ss_dssp HHHHHHHHSTTTTTSCEEEEESCCSHHHHHHHH-HHTCSEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHhCccCCCCeEEEEECCCCHHHHHHHH-HCCCCEEEECCCCHHHHHHHHH
Confidence 566666553 37788873344556666665 6999999874 4444444443
No 42
>d1w96a2 c.30.1.1 (A:14-183) Acetyl-CoA carboxylase, BC-N subdomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=43.28 E-value=23 Score=27.46 Aligned_cols=40 Identities=15% Similarity=0.191 Sum_probs=35.0
Q ss_pred ccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHc--CC
Q 040734 258 NSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKES--KL 297 (361)
Q Consensus 258 ~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~--Gl 297 (361)
...+..++.|++.++++|++-|..+--+++|.+.+.++ |+
T Consensus 116 Ln~~~II~~A~~~~~DAIHPGYGFLSEn~~FA~~~~~a~~gi 157 (170)
T d1w96a2 116 ANVDLIVDIAERADVDAVWAGWGHASENPLLPEKLSQSKRKV 157 (170)
T ss_dssp TCHHHHHHHHHHTTCSEEECCSSTTTTCTHHHHHHHHSTTCC
T ss_pred hhHHHHHHHHHhcCCCEEEechhhhhhCHHHHHHHHHhcCCC
Confidence 45788899999999999999999887789999999877 65
No 43
>d1li4a2 c.23.12.3 (A:3-189,A:353-432) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.17 E-value=62 Score=26.74 Aligned_cols=73 Identities=8% Similarity=-0.019 Sum_probs=48.9
Q ss_pred HHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHh------cCccEEEeCChHHHHHHHHHh
Q 040734 265 KVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHL------MGIDGVIVDLVQEITEAVYDM 338 (361)
Q Consensus 265 ~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~------~GVdgI~TD~p~~~~~~l~~~ 338 (361)
...+..|+....+..+-+....+.+..+.+.|+.|++| .-.+.+++.+++.. .+-+-|+-|-.+....+..++
T Consensus 63 ~tL~~~GA~V~~~~~Np~STQDdvaAaL~~~Gi~VfA~-~g~~~eey~~~~~~~L~~~~~~P~liiDDG~Dl~~~~h~~~ 141 (267)
T d1li4a2 63 ETLVTLGAEVQWSSCNIFSTQDHAAAAIAKAGIPVYAW-KGETDEEYLWCIEQTLYFKDGPLNMILDDGGDLTNLIHTKY 141 (267)
T ss_dssp HHHHHTTCEEEEECSSTTCCCHHHHHHHHHTTCCEEEC-TTCCHHHHHHHHHTTTEETTEECSEEEESSSHHHHHHHHHC
T ss_pred HHHHHccCcEEEeccCcccccccceeeeccCCceEEEe-cCCCHHHHHHHHHHHHhccCCCCcEEEehhhhHHHhhhhhc
Confidence 44567787655444343333567788889999999999 66777777665531 235777778877776665543
No 44
>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}
Probab=41.50 E-value=38 Score=23.95 Aligned_cols=34 Identities=3% Similarity=-0.003 Sum_probs=22.5
Q ss_pred CCCHHHHHHHHHhcCccEEEeCC---hHHHHHHHHHh
Q 040734 305 LNNVAEAVYMQHLMGIDGVIVDL---VQEITEAVYDM 338 (361)
Q Consensus 305 vn~~~~~~~~~~~~GVdgI~TD~---p~~~~~~l~~~ 338 (361)
.+|.+...++....++|.|+.++ |....+.+++.
T Consensus 60 ~~d~~~l~~~~~~~~~DviT~E~EnI~~~~L~~le~~ 96 (111)
T d1kjqa2 60 MLDGDALRRVVELEKPHYIVPEIEAIATDMLIQLEEE 96 (111)
T ss_dssp TTCHHHHHHHHHHHCCSEEEECSSCSCHHHHHHHHHT
T ss_pred CCCHHHHHHHHHhhCCceEEEEecCcCHHHHHHHHHC
Confidence 46777777775446899998766 45555555543
No 45
>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}
Probab=40.08 E-value=55 Score=22.88 Aligned_cols=46 Identities=13% Similarity=0.144 Sum_probs=26.8
Q ss_pred HHHHHHHHcC--CEEEEeccCCCHHHHHHHHHhcCccEEEeCChHHHHHH
Q 040734 287 GAVTKIKESK--LSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEITEA 334 (361)
Q Consensus 287 ~~v~~~~~~G--l~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~~ 334 (361)
++++.+++.+ .+|.+-+.-++.....+++ ..|++++++ .|-...++
T Consensus 63 e~~~~ir~~~~~~pvi~ls~~~~~~~~~~a~-~~Ga~~yl~-KP~~~~~L 110 (118)
T d1u0sy_ 63 DAIKEIMKIDPNAKIIVCSAMGQQAMVIEAI-KAGAKDFIV-KPFQPSRV 110 (118)
T ss_dssp HHHHHHHHHCTTCCEEEEECTTCHHHHHHHH-HTTCCEEEE-SSCCHHHH
T ss_pred HHHHHHHHhCCCCcEEEEEccCCHHHHHHHH-HcCCCEEEE-CCCCHHHH
Confidence 4444444443 6666663345666666665 699999987 34333333
No 46
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]}
Probab=39.77 E-value=49 Score=27.13 Aligned_cols=133 Identities=10% Similarity=0.083 Sum_probs=62.7
Q ss_pred HHHHHhCCCCceEEEEEecCCccchhhhHHHHHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCC--CCCEEEEccC
Q 040734 170 QEAFQQVDPNVGFNVELKFDDHIVYEQDYLIRVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQS--TYPVFFLTNG 247 (361)
Q Consensus 170 ~EvL~~~~~~~~l~iEiK~~~~~~~~~~~~~~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p--~~~~~~l~~~ 247 (361)
+++.+.++..-.|.+||...+...........+.+.+++.+++.+..+-|++.+.+...........| .-.+.+-...
T Consensus 116 ~~~a~r~k~~~~V~~el~NEP~~~~~~~~~~~~~~~~~~~Ir~~dp~~~I~v~g~~~~~~~~~~~~~~~~~~~~v~s~H~ 195 (293)
T d1tvna1 116 EDVATKYGQYDNVIYEIYNEPLQISWVNDIKPYAETVIDKIRAIDPDNLIVVGTPTWSQDVDVASQNPIDRANIAYTLHF 195 (293)
T ss_dssp HHHHHHHTTCTTEEEECCSCCCSCCTTTTHHHHHHHHHHHHHTTCCSCEEEECCHHHHTCHHHHHHSCCCSSSEEEEEEE
T ss_pred HHHHHHhCCCCeEEEEEecccCCCCcHHHHHHHHHHHHHHHhhcCCCcEEEEeCCccccccchhhcCCccCCCceEEEEe
Confidence 34445555433455888876432222234556777788888777655545554433222122222222 1112221110
Q ss_pred CCccccccccccHHHHHHHHHhcCCcEEEcCCcccc----------CChHHHHHHHHcCCEEEEeccCCC
Q 040734 248 GTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVF----------RNPGAVTKIKESKLSLLTYGRLNN 307 (361)
Q Consensus 248 ~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~----------~~~~~v~~~~~~Gl~v~~w~Tvn~ 307 (361)
+.........+....+...+...+...+.... ....+++.+.++|+.-..| +.++
T Consensus 196 ----Y~~~~~~~~~~~~~~~~~~g~Pv~vgEfG~~~~~~~~~~~~~~~~~~~~~~~~~~igw~~W-~~~d 260 (293)
T d1tvna1 196 ----YAGTHGQSYRNKAQTALDNGIALFATEWGTVNADGNGGVNINETDAWMAFFKTNNISHANW-ALND 260 (293)
T ss_dssp ----ETTTCCHHHHHHHHHHHHTTCCEEEEEEESSCTTSCSCCCHHHHHHHHHHHHHHTCCEEEE-EESC
T ss_pred ----eccccchHHHHHHHHHHhcCCCeEeeccCCcccCCCCCCCHHHHHHHHHHHHHhCCeEEEE-Eeec
Confidence 00011122334445555666555444432110 1136677788888888888 6554
No 47
>d1gvfa_ c.1.10.2 (A:) Tagatose-1,6-bisphosphate aldolase {Escherichia coli [TaxId: 562]}
Probab=38.96 E-value=1e+02 Score=25.58 Aligned_cols=110 Identities=20% Similarity=0.264 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEcCC-------H----HHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHh
Q 040734 201 RVIQAILKIVFEFAENRPIIFSTFQ-------P----DAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLE 269 (361)
Q Consensus 201 ~~v~~vl~~l~~~~~~~rv~~~Sf~-------~----~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~ 269 (361)
..+..+++..++.+ .+++++... . ..++.+.+. ..+|+++-.+-. .++ +.+..+.+
T Consensus 28 e~~~avi~AAe~~~--sPvIlq~~~~~~~~~~~~~~~~~~~~~a~~-~~vpV~lHlDH~---------~~~-e~i~~ai~ 94 (284)
T d1gvfa_ 28 ETIQAILEVCSEMR--SPVILAGTPGTFKHIALEEIYALCSAYSTT-YNMPLALHLDHH---------ESL-DDIRRKVH 94 (284)
T ss_dssp HHHHHHHHHHHHHT--CCCEEEECTTHHHHSCHHHHHHHHHHHHHH-TTSCBEEEEEEE---------CCH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHC--CCEEEEcCHhHHhhCCHHHHHHHHHHHHHh-cCCeEEeeeccc---------cch-HHHHHHHh
Confidence 34566666665553 345655332 1 122333333 467876544322 123 33455668
Q ss_pred cCCcEEEcCCccc------cCChHHHHHHHHcCCEEEE-ecc----------------CCCHHHHHHHHHhcCccEE
Q 040734 270 GGLQGIVSEVKGV------FRNPGAVTKIKESKLSLLT-YGR----------------LNNVAEAVYMQHLMGIDGV 323 (361)
Q Consensus 270 ~~~~~i~~~~~~~------~~~~~~v~~~~~~Gl~v~~-w~T----------------vn~~~~~~~~~~~~GVdgI 323 (361)
.|+..+.++.+.+ ..+.++++.+|+.|+.|=+ -|. .-+++++.++....|||.+
T Consensus 95 ~GftSVMiD~S~lp~eeNi~~t~~vv~~ah~~gv~VE~ElG~v~g~ed~~~~~~~~~~~T~peea~~Fv~~TgvD~L 171 (284)
T d1gvfa_ 95 AGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSL 171 (284)
T ss_dssp TTCCEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC-----------CCSSCCHHHHHHHHHHHCCSEE
T ss_pred cCCCeEEEECCCCCHHHHHHHHHHHHHHHHhhccceeeeeeeeccccccccccccccccCCHHHHHHHHHHhCCCEE
Confidence 8898888877654 2357899999999988722 000 1367788787766787754
No 48
>d1wv2a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Pseudomonas aeruginosa [TaxId: 287]}
Probab=38.87 E-value=53 Score=26.85 Aligned_cols=52 Identities=21% Similarity=0.298 Sum_probs=39.4
Q ss_pred CChHHHHHHHH-cCCEEEEeccCCCHHHHHHHHHhcCccEEEeCC-------hHHHHHHHH
Q 040734 284 RNPGAVTKIKE-SKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL-------VQEITEAVY 336 (361)
Q Consensus 284 ~~~~~v~~~~~-~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~-------p~~~~~~l~ 336 (361)
.++..++.+.+ ..+.|++-.-+.++++...++ ++|+|||..|. |..+.+.++
T Consensus 166 ~n~~~l~~i~~~~~vpvivdAGIg~psdaa~AM-ElG~dgVLvnsaIa~A~dP~~mA~A~~ 225 (243)
T d1wv2a_ 166 CNPYNLRIILEEAKVPVLVDAGVGTASDAAIAM-ELGCEAVLMNTAIAHAKDPVMMAEAMK 225 (243)
T ss_dssp SCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHH-HHTCSEEEESHHHHTSSSHHHHHHHHH
T ss_pred ccHHHHHhccccCCcceEeecccCCHHHHHHHH-HccCCEEEechHhhcCCCHHHHHHHHH
Confidence 46777776654 557788877799999999987 69999999874 666665553
No 49
>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}
Probab=37.49 E-value=61 Score=22.63 Aligned_cols=50 Identities=14% Similarity=0.225 Sum_probs=27.6
Q ss_pred HHHHHHHHcC--CEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHHHHH
Q 040734 287 GAVTKIKESK--LSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEAVYD 337 (361)
Q Consensus 287 ~~v~~~~~~G--l~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~~ 337 (361)
+++.++++.+ ..|.+-+..++.+...+.+ .+|++++++= .+..+.+.++.
T Consensus 63 ~~~~~~r~~~~~~~ii~lt~~~~~~~~~~~~-~~Ga~~yl~KP~~~~~L~~~i~~ 116 (121)
T d1mvoa_ 63 EVCKQLRQQKLMFPILMLTAKDEEFDKVLGL-ELGADDYMTKPFSPREVNARVKA 116 (121)
T ss_dssp HHHHHHHHTTCCCCEEEEECTTCCCCHHHHH-HTTCCEEEESSCCHHHHHHHHHH
T ss_pred hhhhhhhccCCCCEEEEEEeeCCHHHHHHHH-HCCCCEEEECCCCHHHHHHHHHH
Confidence 4445555444 4555552233444455555 5899998875 45555555544
No 50
>d1p6qa_ c.23.1.1 (A:) CheY protein {Sinorhizobium meliloti, CheY2 [TaxId: 382]}
Probab=36.98 E-value=65 Score=22.82 Aligned_cols=50 Identities=12% Similarity=0.262 Sum_probs=30.5
Q ss_pred HHHHHHHH----cCCEEEEeccCCCHHHHHHHHHhcCccEEEeC--ChHHHHHHHHH
Q 040734 287 GAVTKIKE----SKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD--LVQEITEAVYD 337 (361)
Q Consensus 287 ~~v~~~~~----~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~~ 337 (361)
++++.+++ .++++...+.-++.+...+++ .+|++++++= .+..+.+.+++
T Consensus 68 el~~~lr~~~~~~~~pii~lt~~~~~~~~~~a~-~~G~~~~l~KP~~~~~L~~~i~~ 123 (129)
T d1p6qa_ 68 GLLQAVRANPATKKAAFIILTAQGDRALVQKAA-ALGANNVLAKPFTIEKMKAAIEA 123 (129)
T ss_dssp HHHHHHTTCTTSTTCEEEECCSCCCHHHHHHHH-HHTCSCEECCCSSHHHHHHHHHH
T ss_pred HHHHHHHhCcccCCCeEEEEEecCCHHHHHHHH-HCCCCEEEECCCCHHHHHHHHHH
Confidence 55555554 347778873334555566665 6899998863 45555555544
No 51
>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]}
Probab=35.72 E-value=24 Score=29.05 Aligned_cols=42 Identities=14% Similarity=0.116 Sum_probs=31.0
Q ss_pred hHHHHHHHHcCCEEEEeccC------C--------C-HHHHHHHHHhcCccEEEeCChH
Q 040734 286 PGAVTKIKESKLSLLTYGRL------N--------N-VAEAVYMQHLMGIDGVIVDLVQ 329 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tv------n--------~-~~~~~~~~~~~GVdgI~TD~p~ 329 (361)
+.+++.+|++|+++..| +- + . ...++.+ .++|||.|-.|+..
T Consensus 77 ~~~~~~~~~~G~~~Glw-~~~~~~~~~~~~~~~~~~~~~d~~~~-~~wGvd~vK~D~~~ 133 (273)
T d1uasa2 77 KALADYVHAKGLKLGIY-SDAGSQTCSNKMPGSLDHEEQDVKTF-ASWGVDYLKYDNCN 133 (273)
T ss_dssp HHHHHHHHHTTCEEEEE-EESSSBCTTSSSBCCTTCHHHHHHHH-HHHTCCEEEEECCC
T ss_pred HHHHHHHHhCCCeEEEe-cCCcccccCCCCCcchhhHHHHHHHH-HhCCCceecccccc
Confidence 47899999999999999 42 1 1 2234444 57999999999753
No 52
>d1znna1 c.1.2.6 (A:18-271) Pyridoxal biosynthesis lyase PdxS {Bacillus stearothermophilus [TaxId: 1422]}
Probab=35.20 E-value=36 Score=27.90 Aligned_cols=50 Identities=24% Similarity=0.336 Sum_probs=36.6
Q ss_pred ChHHHHHHHHcC---CEEEEeccCCCHHHHHHHHHhcCccEEEeCC-------hHHHHHHH
Q 040734 285 NPGAVTKIKESK---LSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL-------VQEITEAV 335 (361)
Q Consensus 285 ~~~~v~~~~~~G---l~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~-------p~~~~~~l 335 (361)
..+++.+.++.| ..+++-+.+-++.+...++ ++|+|||+.+. |..+.+.+
T Consensus 175 p~~l~~~v~~~g~l~v~~~~~~Gi~tpadaa~~M-elG~dgV~v~s~I~~s~dP~~~a~A~ 234 (254)
T d1znna1 175 PVEVLREIKRLGRLPVVNFAAGGVTTPADAALMM-HLGADGVFVGSGIFKSENPEKYARAI 234 (254)
T ss_dssp CHHHHHHHHHHTSCSSEEEEESSCCSHHHHHHHH-HTTCSEEEECGGGGGSSCHHHHHHHH
T ss_pred chHHHHHHHHhCCCCceEEecCCCCChhhHHHHH-HcCCCEEEEcchhhcCCCHHHHHHHH
Confidence 446677777766 4556666789999998887 69999999764 66655554
No 53
>d1l6wa_ c.1.10.1 (A:) Decameric fructose-6-phosphate aldolase/transaldolase {Escherichia coli [TaxId: 562]}
Probab=34.38 E-value=23 Score=28.62 Aligned_cols=33 Identities=15% Similarity=0.153 Sum_probs=0.0
Q ss_pred CEEEEeccCCCHHHHHHHHHhcC-ccEEEeCChHHHHH
Q 040734 297 LSLLTYGRLNNVAEAVYMQHLMG-IDGVIVDLVQEITE 333 (361)
Q Consensus 297 l~v~~w~Tvn~~~~~~~~~~~~G-VdgI~TD~p~~~~~ 333 (361)
++++.- |.| .++++++. .+| |+||+|| |..+.+
T Consensus 1 Mkl~lD-tAd-~~eik~~~-~~~~i~GvTTN-Psll~k 34 (220)
T d1l6wa_ 1 MELYLD-TSD-VVAVKALS-RIFPLAGVTTN-PSIIAA 34 (220)
T ss_dssp CEEEEE-CCC-HHHHHHHH-TTSCCCEEECC-HHHHHH
T ss_pred CEEEEE-cCC-HHHHHHHH-hcCCCCEEecC-HHHHHh
No 54
>d2ayxa1 c.23.1.1 (A:817-949) Sensor kinase protein RcsC, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=33.27 E-value=55 Score=23.44 Aligned_cols=48 Identities=15% Similarity=0.201 Sum_probs=27.9
Q ss_pred HHHHHHHHc--CCEEEEeccCC-CHHHHHHHHHhcCccEEEeC--ChHHHHHHHH
Q 040734 287 GAVTKIKES--KLSLLTYGRLN-NVAEAVYMQHLMGIDGVIVD--LVQEITEAVY 336 (361)
Q Consensus 287 ~~v~~~~~~--Gl~v~~w~Tvn-~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~ 336 (361)
++++.+++. ..+|.+- |.. +.+...+++ ..|++++++= .+..+.+.+.
T Consensus 69 el~~~ir~~~~~~pii~l-t~~~~~~~~~~~~-~~G~~~~l~KP~~~~~L~~~l~ 121 (133)
T d2ayxa1 69 RLTQRIRQLGLTLPVIGV-TANALAEEKQRCL-ESGMDSCLSKPVTLDVIKQTLT 121 (133)
T ss_dssp HHHHHHHHHHCCSCEEEE-ESSTTSHHHHHHH-HCCCEEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCEEEE-eccCCHHHHHHHH-HcCCCEEEECCCCHHHHHHHHH
Confidence 445555444 3666666 443 445556665 6999999874 3444544443
No 55
>d2tpsa_ c.1.3.1 (A:) Thiamin phosphate synthase {Bacillus subtilis [TaxId: 1423]}
Probab=32.71 E-value=25 Score=28.29 Aligned_cols=56 Identities=18% Similarity=0.093 Sum_probs=38.4
Q ss_pred HHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeC
Q 040734 265 KVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD 326 (361)
Q Consensus 265 ~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD 326 (361)
+.+...+++|+|+..... ....++... |-.+... ++++.++..... ..|+|.|..-
T Consensus 87 ~lA~~~~adGvHl~~~d~--~~~~~r~~~--~~~iig~-S~h~~~e~~~a~-~~g~DYi~~g 142 (226)
T d2tpsa_ 87 ELALNLKADGIHIGQEDA--NAKEVRAAI--GDMILGV-SAHTMSEVKQAE-EDGADYVGLG 142 (226)
T ss_dssp HHHHHHTCSEEEECTTSS--CHHHHHHHH--TTSEEEE-EECSHHHHHHHH-HHTCSEEEEC
T ss_pred HHHhhccCCEEEeccccc--hhhhhhhcc--cceeeee-eccchHHHHHHH-hCcCCeEEEe
Confidence 456677899999876543 455555443 3446666 678888887775 6899988743
No 56
>d1k66a_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Calothrix sp. pcc 7601, RcpB [TaxId: 1188]}
Probab=32.14 E-value=86 Score=22.78 Aligned_cols=39 Identities=18% Similarity=0.228 Sum_probs=26.7
Q ss_pred HHHHHHHHc----CCEEEEeccCCCHHHHHHHHHhcCccEEEeC
Q 040734 287 GAVTKIKES----KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD 326 (361)
Q Consensus 287 ~~v~~~~~~----Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD 326 (361)
++++.+|+. .++|+.-+.-++.....+++ ..|++++++=
T Consensus 79 el~~~ir~~~~~~~ipiI~lT~~~~~~~~~~~~-~~Ga~~~l~K 121 (149)
T d1k66a_ 79 EVLQEIKQDEVLKKIPVVIMTTSSNPKDIEICY-SYSISSYIVK 121 (149)
T ss_dssp HHHHHHTTSTTGGGSCEEEEESCCCHHHHHHHH-HTTCSEEEEC
T ss_pred HHHHHHHhccccCCCeEEEEeCCCCHHHHHHHH-HCCCCEEEEC
Confidence 556666543 56777773445666677776 6999999983
No 57
>d1q6oa_ c.1.2.3 (A:) 3-keto-L-gulonate 6-phosphate decarboxylase {Escherichia coli [TaxId: 562]}
Probab=31.82 E-value=98 Score=23.31 Aligned_cols=92 Identities=15% Similarity=0.016 Sum_probs=55.3
Q ss_pred cCCHHHHHHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccc-cCChHHHHHHHHcCCEEEE
Q 040734 223 TFQPDAAVLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGV-FRNPGAVTKIKESKLSLLT 301 (361)
Q Consensus 223 Sf~~~~l~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~-~~~~~~v~~~~~~Gl~v~~ 301 (361)
+|..+.++.+++..|+.+........ |. .....+.+.+.|++.+.++...- -.-..+++.+++.|..+.+
T Consensus 39 ~~G~~~i~~l~~~~~~~~i~~d~k~~-----d~----~~~~~~~~~~~gad~vtvh~~~g~~~~~~~~~~~~~~~~~~~v 109 (213)
T d1q6oa_ 39 GEGVRAVRDLKALYPHKIVLADAKIA-----DA----GKILSRMCFEANADWVTVICCADINTAKGALDVAKEFNGDVQI 109 (213)
T ss_dssp HHCTHHHHHHHHHCTTSEEEEEEEEC-----SC----HHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCHHHHHHHHHhcccccceeEEeec-----cc----hHHHHHHHHHcCCCEEEEeccCCchHHHHHHHHHHHcCCceec
Confidence 56678899999998887765433211 11 11223344577888887764321 0123566777889988754
Q ss_pred e-ccCCCHHHHHHHHHhcCccEEE
Q 040734 302 Y-GRLNNVAEAVYMQHLMGIDGVI 324 (361)
Q Consensus 302 w-~Tvn~~~~~~~~~~~~GVdgI~ 324 (361)
- .+..+......+. ..|++.++
T Consensus 110 ~~~~~~~~~~~~~~~-~~~~~~~~ 132 (213)
T d1q6oa_ 110 ELTGYWTWEQAQQWR-DAGIGQVV 132 (213)
T ss_dssp EECSCCCHHHHHHHH-HTTCCEEE
T ss_pred ccCCCCCHHHHHHHH-HhHHHHHH
Confidence 3 1444556665664 57887765
No 58
>d1mxsa_ c.1.10.1 (A:) KDPG aldolase {Pseudomonas putida [TaxId: 303]}
Probab=31.37 E-value=1.2e+02 Score=24.09 Aligned_cols=82 Identities=15% Similarity=0.146 Sum_probs=50.8
Q ss_pred HHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEe-CChHHHHHHHHH
Q 040734 261 EEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIV-DLVQEITEAVYD 337 (361)
Q Consensus 261 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T-D~p~~~~~~l~~ 337 (361)
....+.+...|+..+-+..+.- ..-+.++.++++ ++.|.+= ||-+.++.+++. +.|++.++| .....+.++..+
T Consensus 32 ~~~~~al~~~Gi~~iEitl~~p-~a~~~i~~l~~~~p~~~vGaG-TV~~~~~~~~a~-~aGa~FivsP~~~~~v~~~a~~ 108 (216)
T d1mxsa_ 32 LPLADALAAGGIRTLEVTLRSQ-HGLKAIQVLREQRPELCVGAG-TVLDRSMFAAVE-AAGAQFVVTPGITEDILEAGVD 108 (216)
T ss_dssp HHHHHHHHHTTCCEEEEESSST-HHHHHHHHHHHHCTTSEEEEE-CCCSHHHHHHHH-HHTCSSEECSSCCHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEeCCCh-hHHHHHHHHHHhCCCcceeee-eeecHHHHHHHH-hCCCCEEECCCCcHHHHHHHHh
Confidence 3444555567777655444321 112556665554 5777777 888888888886 689998887 445555666666
Q ss_pred hcCCcccc
Q 040734 338 MIKPAKVV 345 (361)
Q Consensus 338 ~~~~~~~~ 345 (361)
...+--++
T Consensus 109 ~~i~~iPG 116 (216)
T d1mxsa_ 109 SEIPLLPG 116 (216)
T ss_dssp CSSCEECE
T ss_pred cCCCccCC
Confidence 55544443
No 59
>d1twda_ c.1.30.1 (A:) Copper homeostasis protein CutC {Shigella flexneri [TaxId: 623]}
Probab=31.14 E-value=1.3e+02 Score=24.41 Aligned_cols=112 Identities=17% Similarity=0.110 Sum_probs=66.1
Q ss_pred cCCCCEEEEc--------CCHHHHHHHHHHCCCCCEEEEccCCCc--cccccccccHHHHHHHHHhcCCcEEEcCCcc--
Q 040734 214 AENRPIIFST--------FQPDAAVLIRKLQSTYPVFFLTNGGTE--IFYDVRRNSLEEAVKVCLEGGLQGIVSEVKG-- 281 (361)
Q Consensus 214 ~~~~rv~~~S--------f~~~~l~~l~~~~p~~~~~~l~~~~~~--~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~-- 281 (361)
+..+|+-++| .+...++.+++.. ++|+..+...... .|.+..-..+.+.++.+++.|+++++.-.-.
T Consensus 19 ~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~-~iPv~vMIRPR~GdF~Ys~~E~~~M~~di~~~k~~G~dGvV~G~L~~d 97 (247)
T d1twda_ 19 NGADRVELCAAPKEGGLTPSLGVLKSVRQRV-TIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVD 97 (247)
T ss_dssp TTCSEEEECBCGGGTCBCCCHHHHHHHHHHC-CSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTT
T ss_pred cCCCEEEEcCCcccCCCCCCHHHHHHHHHhc-CCCeEEEEecCCCCCCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCC
Confidence 4567888874 4678888888764 7999887765432 1222111224556778899999998865421
Q ss_pred ccCChHHHHHH--HHcCCEEEEe---ccCCCHHH-HHHHHHhcCccEEEeCC
Q 040734 282 VFRNPGAVTKI--KESKLSLLTY---GRLNNVAE-AVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 282 ~~~~~~~v~~~--~~~Gl~v~~w---~Tvn~~~~-~~~~~~~~GVdgI~TD~ 327 (361)
-.++.+.++.+ ...|+.+..- ..+.++.+ ++++. .+|++.|.|--
T Consensus 98 g~iD~~~~~~L~~~a~~l~vTFHRAfD~~~d~~~al~~Li-~lG~~rILTSG 148 (247)
T d1twda_ 98 GNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLA-ELGIARVLTSG 148 (247)
T ss_dssp SSBCHHHHHHHHHHHTTSEEEECGGGGGCSCHHHHHHHHH-HHTCCEEEECT
T ss_pred CCccHHHHHHHHHHhcccCeeeehhhhhhCCHHHHHHHHH-hcCCCeEeccC
Confidence 01233444433 2246665432 12334444 55665 68999999843
No 60
>d1rvga_ c.1.10.2 (A:) Fructose-bisphosphate aldolase (FBP aldolase) {Thermus aquaticus [TaxId: 271]}
Probab=30.99 E-value=1.4e+02 Score=24.89 Aligned_cols=111 Identities=22% Similarity=0.269 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCHHHHH--------HHH--HHCCCCCEEEEccCCCccccccccccHHHHHHHHHhc
Q 040734 201 RVIQAILKIVFEFAENRPIIFSTFQPDAAV--------LIR--KLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEG 270 (361)
Q Consensus 201 ~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~--------~l~--~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~ 270 (361)
..+..+++.-++. ..+++++... ..++ .++ .....+|+++=.+-. .+++ .+..+.+.
T Consensus 28 e~~~avi~AAee~--~sPvIiq~s~-~~~~~~~~~~~~~~~~~a~~~~vpv~lHlDH~---------~~~e-~i~~ai~~ 94 (305)
T d1rvga_ 28 EFLQAVLEAAEEQ--RSPVILALSE-GAMKYGGRALTLMAVELAKEARVPVAVHLDHG---------SSYE-SVLRALRA 94 (305)
T ss_dssp HHHHHHHHHHHHT--TCCEEEEEEH-HHHHHHHHHHHHHHHHHHHHCSSCEEEEEEEE---------CSHH-HHHHHHHT
T ss_pred HHHHHHHHHHHHH--CCCEEEECCc-cHHhHccHHHHHHHHHHHhccCCcEEEeehhc---------cChh-hhHHHHhc
Confidence 3455666665554 3456666431 1111 111 124578887654432 1343 34456678
Q ss_pred CCcEEEcCCccc------cCChHHHHHHHHcCCEEEE-ecc----------------CCCHHHHHHHHHhcCccEEE
Q 040734 271 GLQGIVSEVKGV------FRNPGAVTKIKESKLSLLT-YGR----------------LNNVAEAVYMQHLMGIDGVI 324 (361)
Q Consensus 271 ~~~~i~~~~~~~------~~~~~~v~~~~~~Gl~v~~-w~T----------------vn~~~~~~~~~~~~GVdgI~ 324 (361)
|++.+..+.+.+ ..+.++++.+|..|+.|=+ -|. .-+++++.++....|||.+-
T Consensus 95 GftSVMiDgS~l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~igg~Ed~~~~~~~~~~~T~peea~~Fv~~TgvD~LA 171 (305)
T d1rvga_ 95 GFTSVMIDKSHEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFMERTGADYLA 171 (305)
T ss_dssp TCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCSCC------CCTTCCCHHHHHHHHHHHCCSEEE
T ss_pred CCceEEEcCccccHHHHHHHHHHHHHHhchhceeEEeeeeeeecccccccccccccccCCHHHHHHHHHHhCccHhh
Confidence 999888877653 2367999999999988822 000 12678888877667887554
No 61
>d1xrsb1 c.23.6.1 (B:102-261) D-lysine 5,6-aminomutase beta subunit KamE, C-terminal domain {Clostridium sticklandii [TaxId: 1511]}
Probab=30.52 E-value=1e+02 Score=23.09 Aligned_cols=74 Identities=14% Similarity=0.051 Sum_probs=47.2
Q ss_pred cHHHHHHHHHhcCCcEEEcCCccc------cCChHHHHHHHHcCC----EEEEeccCCCHHHHHHHHHhcCccEEEeCC-
Q 040734 259 SLEEAVKVCLEGGLQGIVSEVKGV------FRNPGAVTKIKESKL----SLLTYGRLNNVAEAVYMQHLMGIDGVIVDL- 327 (361)
Q Consensus 259 ~l~~~~~~~~~~~~~~i~~~~~~~------~~~~~~v~~~~~~Gl----~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~- 327 (361)
+.++.++.+.+.+++.+.++.... ..-+++++.++++|+ +|++=|..=+++. +..+|+|+++.+-
T Consensus 67 p~e~~v~~a~e~~~d~VglS~l~t~~~~h~~~~~~~i~~l~~~g~~d~v~vivGG~~~~~~~----a~~~GaD~~f~~g~ 142 (160)
T d1xrsb1 67 ANEDFIKKAVELEADVLLVSQTVTQKNVHIQNMTHLIELLEAEGLRDRFVLLCGGPRINNEI----AKELGYDAGFGPGR 142 (160)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCCCTTSHHHHHHHHHHHHHHHTTCGGGSEEEEECTTCCHHH----HHTTTCSEEECTTC
T ss_pred CHHHHHHHHHhcCCCEEEEeecccccchhHHHHHHHHHHHHHcCCCCceEEEEcCCCCCHHH----HHHcCCCEEcCCCC
Confidence 467778888888888777664321 012578899999986 5565543333332 2468999999884
Q ss_pred -hHHHHHHHH
Q 040734 328 -VQEITEAVY 336 (361)
Q Consensus 328 -p~~~~~~l~ 336 (361)
+..+.+++.
T Consensus 143 ~a~~~a~~l~ 152 (160)
T d1xrsb1 143 FADDVATFAV 152 (160)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 444444443
No 62
>d1s8na_ c.23.1.1 (A:) Probable two-component system transcriptional regulator Rv1626 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=30.38 E-value=46 Score=25.43 Aligned_cols=47 Identities=11% Similarity=0.104 Sum_probs=25.4
Q ss_pred HHHHHHHHcC-CEEEEeccCC-CHHHHHHHHHhcCccEEEe--CChHHHHHHH
Q 040734 287 GAVTKIKESK-LSLLTYGRLN-NVAEAVYMQHLMGIDGVIV--DLVQEITEAV 335 (361)
Q Consensus 287 ~~v~~~~~~G-l~v~~w~Tvn-~~~~~~~~~~~~GVdgI~T--D~p~~~~~~l 335 (361)
++++.+++.+ .+|++- |.. +.+...+++ .+|++++++ =.|..+...+
T Consensus 65 e~~~~ir~~~~~pIi~l-Ta~~~~~~~~~al-~~Ga~~yl~KP~~~~~L~~~i 115 (190)
T d1s8na_ 65 DAASEIASKRIAPIVVL-TAFSQRDLVERAR-DAGAMAYLVKPFSISDLIPAI 115 (190)
T ss_dssp HHHHHHHHTTCSCEEEE-EEGGGHHHHHTTG-GGSCEEEEEESCCHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEE-eCCCCHHHHHHHH-HcCCCEeccCCCCHHHHHHHH
Confidence 4555554443 566666 443 344444454 588888886 3344444443
No 63
>d1pv8a_ c.1.10.3 (A:) 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.31 E-value=64 Score=27.46 Aligned_cols=66 Identities=14% Similarity=0.156 Sum_probs=43.5
Q ss_pred hcCCcEEEcCCccccCChHHHHHHHHc--CCEEEEeccCCCHHHH----------------HH---HHHhcCccEEEeCC
Q 040734 269 EGGLQGIVSEVKGVFRNPGAVTKIKES--KLSLLTYGRLNNVAEA----------------VY---MQHLMGIDGVIVDL 327 (361)
Q Consensus 269 ~~~~~~i~~~~~~~~~~~~~v~~~~~~--Gl~v~~w~Tvn~~~~~----------------~~---~~~~~GVdgI~TD~ 327 (361)
.-|++.+.+-... ..-++|+.+++. +++|.+| -|--+-.| .+ .+++.|.|.|+|=+
T Consensus 233 ~EGAD~lMVKPa~--~yLDiI~~~k~~~~~~Pv~aY-qVSGEYami~aa~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~ 309 (320)
T d1pv8a_ 233 REGADMLMVKPGM--PYLDIVREVKDKHPDLPLAVY-HVSGEFAMLWHGAQAGAFDLKAAVLEAMTAFRRAGADIIITYY 309 (320)
T ss_dssp HTTCSBEEEESCG--GGHHHHHHHHHHSTTSCEEEE-ECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTCSEEEETT
T ss_pred hcCCceEeeehhH--HHHHHHHHHHhhCCCCCEEEE-EccHHHHHHHHHHHCCCCchHHHHHHHHHHHHhcCCCEEEEhh
Confidence 4566665433221 244889999875 6899998 54322222 11 23468999999999
Q ss_pred hHHHHHHHHH
Q 040734 328 VQEITEAVYD 337 (361)
Q Consensus 328 p~~~~~~l~~ 337 (361)
...+.++|++
T Consensus 310 A~~~a~~L~~ 319 (320)
T d1pv8a_ 310 TPQLLQWLKE 319 (320)
T ss_dssp HHHHHHHTTT
T ss_pred HHHHHHHHhc
Confidence 9999888754
No 64
>d1izca_ c.1.12.5 (A:) Macrophomate synthase {Macrophoma commelinae [TaxId: 108330]}
Probab=30.18 E-value=1.4e+02 Score=24.70 Aligned_cols=79 Identities=15% Similarity=0.114 Sum_probs=49.3
Q ss_pred HHHHHHhcCCcEEEcCCccccCCh----HHHHHHHHcC---CEEEEeccCCCHHHHHHHHHhcCccEEEe---CChHHHH
Q 040734 263 AVKVCLEGGLQGIVSEVKGVFRNP----GAVTKIKESK---LSLLTYGRLNNVAEAVYMQHLMGIDGVIV---DLVQEIT 332 (361)
Q Consensus 263 ~~~~~~~~~~~~i~~~~~~~~~~~----~~v~~~~~~G---l~v~~w~Tvn~~~~~~~~~~~~GVdgI~T---D~p~~~~ 332 (361)
..+.+-..|++++.++...-..+. .+++.++..| ..+.+=-.-+++..+.+++ ++|++||+. +.++.+.
T Consensus 54 ~~e~~a~~g~D~v~iD~EHg~~~~~~~~~~i~a~~~~~~~~~~~iVRvp~~~~~~I~~~L-D~Ga~GIivP~V~s~eea~ 132 (299)
T d1izca_ 54 VTKVLAATKPDFVWIDVEHGMFNRLELHDAIHAAQHHSEGRSLVIVRVPKHDEVSLSTAL-DAGAAGIVIPHVETVEEVR 132 (299)
T ss_dssp HHHHHHHTCCSEEEEETTTSCCCHHHHHHHHHHHHHHTTTCSEEEEECCTTCHHHHHHHH-HHTCSEEEETTCCCHHHHH
T ss_pred HHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHHHHHhCCCCCCeEEeCCCCChHHHHHHH-HhCcCeeeccccccHHHHH
Confidence 345666788888887765432332 4455565544 3333321236778888887 799999995 6677777
Q ss_pred HHHHHhcCCc
Q 040734 333 EAVYDMIKPA 342 (361)
Q Consensus 333 ~~l~~~~~~~ 342 (361)
++++...=|.
T Consensus 133 ~~v~~~rypP 142 (299)
T d1izca_ 133 EFVKEMYYGP 142 (299)
T ss_dssp HHHHHHSCTT
T ss_pred HHHHhhhhcc
Confidence 7777543333
No 65
>d1wx0a1 c.1.10.1 (A:1-211) Decameric fructose-6-phosphate aldolase/transaldolase {Thermus thermophilus [TaxId: 274]}
Probab=29.79 E-value=41 Score=26.73 Aligned_cols=40 Identities=15% Similarity=0.165 Sum_probs=0.0
Q ss_pred CEEEEeccCCCHHHHHHHHHhcC-ccEEEeCChHHHHHHHHHhcC
Q 040734 297 LSLLTYGRLNNVAEAVYMQHLMG-IDGVIVDLVQEITEAVYDMIK 340 (361)
Q Consensus 297 l~v~~w~Tvn~~~~~~~~~~~~G-VdgI~TD~p~~~~~~l~~~~~ 340 (361)
++++.- |.| .++++++. .+| ++||+|| |..+.+.......
T Consensus 1 Mk~~lD-tad-~~eik~~~-~~g~i~GvTTN-Ptl~~k~~~~~~~ 41 (211)
T d1wx0a1 1 MELYLD-TAS-LEEIREIA-AWGVLSGVTTN-PTLVAKAFAAKGE 41 (211)
T ss_dssp CEEEEE-CCC-HHHHHHHH-HHTCCCEEECC-HHHHHHHHHHHTC
T ss_pred CEEEEE-cCC-HHHHHHHh-cCCCcCeEeeC-HHHHHHcCCCchh
No 66
>d2basa1 c.1.33.1 (A:2-262) Hypothetical protein YkuI, N-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=29.42 E-value=31 Score=28.01 Aligned_cols=40 Identities=10% Similarity=-0.138 Sum_probs=32.9
Q ss_pred hHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 286 PGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
..++..+|..|++|++= -|++.++...+. .+|||.+.=.+
T Consensus 192 ~~l~~~a~~~~~~vIae-GVE~~~~~~~l~-~lg~d~~QG~~ 231 (261)
T d2basa1 192 YSISLLARKIGAALLYE-DIEANFQLQYAW-RNGGRYFQGYY 231 (261)
T ss_dssp HHHHHHHHHHTCEEEEE-CCCSHHHHHHHH-HTTEEEECSTT
T ss_pred HHHHHHHHHcCCEEEEE-eCCcHHHHHHHH-HcCCCEEECCc
Confidence 46677889999999999 699999998885 79999875443
No 67
>d1yxya1 c.1.2.5 (A:4-233) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Streptococcus pyogenes [TaxId: 1314]}
Probab=29.39 E-value=1.2e+02 Score=23.38 Aligned_cols=152 Identities=13% Similarity=0.047 Sum_probs=76.9
Q ss_pred cCHHHHHHhCCCCceEEEEEecCCccchhhhHHHHHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCCCCCEEEEcc
Q 040734 167 CTLQEAFQQVDPNVGFNVELKFDDHIVYEQDYLIRVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQSTYPVFFLTN 246 (361)
Q Consensus 167 ptL~EvL~~~~~~~~l~iEiK~~~~~~~~~~~~~~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p~~~~~~l~~ 246 (361)
||=+++++.++.++.+.++-+...+..... ...+.++.+...+.+ ..-+.+ -....++.+|+. .+.|......
T Consensus 2 ~~k~~li~~lk~~livs~q~~~~~p~~~~~---~~~v~~~A~a~~~~G-a~~i~~--~~~~~~~~ir~~-~~~~~~~~~~ 74 (230)
T d1yxya1 2 PTKEKLMEQLKGGIIVSCQALPGEPLYSET---GGIMPLMAKAAQEAG-AVGIRA--NSVRDIKEIQAI-TDLPIIGIIK 74 (230)
T ss_dssp CCHHHHHHHHTTSCEEECCCCTTSTTCCTT---CCSHHHHHHHHHHHT-CSEEEE--ESHHHHHHHHTT-CCSCEEEECB
T ss_pred ccHHHHHHHHcCCeEEEEecCCCCcccCCC---hHHHHHHHHHHHHCC-CeEEEe--cChhhHHHHHhh-hhcchhhhhc
Confidence 677888999987654444433322211000 012223333333333 222222 356777777775 4566554432
Q ss_pred CCCccccccccccHHHHHHHHHhcCCcEEEcCCcccc-----CChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCcc
Q 040734 247 GGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVF-----RNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGID 321 (361)
Q Consensus 247 ~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVd 321 (361)
.............. .........+++.+........ ...+.++.++..+..+.++..+.+.++...+. +.|+|
T Consensus 75 ~~~~~~~~~~~~~~-~~~~~~~~~gad~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~t~~~a~~a~-~~Gad 152 (230)
T d1yxya1 75 KDYPPQEPFITATM-TEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADISTFDEGLVAH-QAGID 152 (230)
T ss_dssp CCCTTSCCCBSCSH-HHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECSSHHHHHHHH-HTTCS
T ss_pred ccCCcceeeechhH-HHHHHHHhcCCCEEEEecccccccchhhHHHHHHHHHhcCCCceEecCCCCHHHHHHHH-hcCCC
Confidence 21100000111112 2334455667776654432211 11366777777765555664688888887775 79999
Q ss_pred EEEeCC
Q 040734 322 GVIVDL 327 (361)
Q Consensus 322 gI~TD~ 327 (361)
.|.+..
T Consensus 153 ~i~~~~ 158 (230)
T d1yxya1 153 FVGTTL 158 (230)
T ss_dssp EEECTT
T ss_pred EEEeec
Confidence 997643
No 68
>d2f6ua1 c.1.4.1 (A:1001-1231) (S)-3-O-geranylgeranylglyceryl phosphate synthase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=28.93 E-value=16 Score=29.59 Aligned_cols=55 Identities=29% Similarity=0.315 Sum_probs=35.2
Q ss_pred CCcEEEcCCccccCChHHHHHHHH-c-CCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 271 GLQGIVSEVKGVFRNPGAVTKIKE-S-KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 271 ~~~~i~~~~~~~~~~~~~v~~~~~-~-Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
+..++..........++.+...++ . .+++.+=+-|+++++++++. .+.|||+.-.
T Consensus 160 s~~gvtg~~~~~~~~~~~~~~~~k~~~~~Pv~VGFGI~s~e~a~~~~--~~ADgvIVGS 216 (231)
T d2f6ua1 160 NLPIIYIEYSGTYGNPELVAEVKKVLDKARLFYGGGIDSREKAREML--RYADTIIVGN 216 (231)
T ss_dssp CCSEEEEECTTSCCCHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHH--HHSSEEEECH
T ss_pred ceEEEEEecccccchhhHHHHHHHhcCCCCEEEEeCcCCHHHHHHHH--hcCCEEEECh
Confidence 455554443333334555555544 3 37887543699999998875 4799999875
No 69
>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}
Probab=28.80 E-value=97 Score=22.33 Aligned_cols=108 Identities=7% Similarity=0.015 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCHHH-HHHHHHHC-CCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcC
Q 040734 201 RVIQAILKIVFEFAENRPIIFSTFQPDA-AVLIRKLQ-STYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSE 278 (361)
Q Consensus 201 ~~v~~vl~~l~~~~~~~rv~~~Sf~~~~-l~~l~~~~-p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~ 278 (361)
.+...+++.+.+.+. ++++.-.+++. ...+.+.. .++.+. ..... -.+.++-+.-..+..+..-
T Consensus 13 ~~g~~l~~~L~~~~~--~v~vId~d~~~~~~~~~~~~~~~~~vi--~Gd~~----------d~~~L~~a~i~~a~~vi~~ 78 (153)
T d1id1a_ 13 ILAINTILQLNQRGQ--NVTVISNLPEDDIKQLEQRLGDNADVI--PGDSN----------DSSVLKKAGIDRCRAILAL 78 (153)
T ss_dssp HHHHHHHHHHHHTTC--CEEEEECCCHHHHHHHHHHHCTTCEEE--ESCTT----------SHHHHHHHTTTTCSEEEEC
T ss_pred HHHHHHHHHHHHcCC--CEEEEeccchhHHHHHHHhhcCCcEEE--EccCc----------chHHHHHhccccCCEEEEc
Confidence 456667777776653 56666666543 33333332 234332 22211 1122222222234445433
Q ss_pred CccccCChHHHHHHHHcC--CEEEEeccCCCHHHHHHHHHhcCccEEEe
Q 040734 279 VKGVFRNPGAVTKIKESK--LSLLTYGRLNNVAEAVYMQHLMGIDGVIV 325 (361)
Q Consensus 279 ~~~~~~~~~~v~~~~~~G--l~v~~w~Tvn~~~~~~~~~~~~GVdgI~T 325 (361)
......+-..+..+++.+ .++++- +++++....+ ..+|+|.|++
T Consensus 79 ~~~d~~n~~~~~~~r~~~~~~~iia~--~~~~~~~~~l-~~~Gad~vi~ 124 (153)
T d1id1a_ 79 SDNDADNAFVVLSAKDMSSDVKTVLA--VSDSKNLNKI-KMVHPDIILS 124 (153)
T ss_dssp SSCHHHHHHHHHHHHHHTSSSCEEEE--CSSGGGHHHH-HTTCCSEEEC
T ss_pred cccHHHHHHHHHHHHHhCCCCceEEE--EcCHHHHHHH-HHCCCCEEEC
Confidence 322112335555666754 456665 5777666666 4799999986
No 70
>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]}
Probab=28.71 E-value=87 Score=21.74 Aligned_cols=50 Identities=12% Similarity=0.151 Sum_probs=27.5
Q ss_pred HHHHHHHHc----CCEEEEeccCCC-HHHHHHHHHhcCccEEEeC--ChHHHHHHHHHh
Q 040734 287 GAVTKIKES----KLSLLTYGRLNN-VAEAVYMQHLMGIDGVIVD--LVQEITEAVYDM 338 (361)
Q Consensus 287 ~~v~~~~~~----Gl~v~~w~Tvn~-~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~~~ 338 (361)
++++.+++. .+++.+. |..+ .....++. ..|++++++= .+..+.+.+++.
T Consensus 62 el~~~ir~~~~~~~iPii~l-t~~~~~~~~~~~~-~~G~~~~l~KP~~~~~L~~~i~~~ 118 (123)
T d1mb3a_ 62 EVTKWLKEDDDLAHIPVVAV-TAFAMKGDEERIR-EGGCEAYISKPISVVHFLETIKRL 118 (123)
T ss_dssp HHHHHHHHSTTTTTSCEEEE-C------CHHHHH-HHTCSEEECSSCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcCCCCeEEE-EEecCHHHHHHHH-HcCCCEEEECCCCHHHHHHHHHHH
Confidence 555666553 3577777 5443 33444554 6899999874 345555555544
No 71
>d1i4na_ c.1.2.4 (A:) Indole-3-glycerophosphate synthase, IPGS {Thermotoga maritima [TaxId: 2336]}
Probab=28.52 E-value=86 Score=25.58 Aligned_cols=161 Identities=12% Similarity=0.061 Sum_probs=89.1
Q ss_pred CHHHHHHhCCCCceEEEEEecCCccc--h-hhhHHHHHHHHHHHHHHHhcC------CCCEEEEcCCHHHHHHHHHHCCC
Q 040734 168 TLQEAFQQVDPNVGFNVELKFDDHIV--Y-EQDYLIRVIQAILKIVFEFAE------NRPIIFSTFQPDAAVLIRKLQST 238 (361)
Q Consensus 168 tL~EvL~~~~~~~~l~iEiK~~~~~~--~-~~~~~~~~v~~vl~~l~~~~~------~~rv~~~Sf~~~~l~~l~~~~p~ 238 (361)
.|.+.|. -++++.++-|+|..+|.. . +..+... +.+... .|. .+.-+|. -+.+.+..+++. .+
T Consensus 30 ~f~~al~-~~~~~~iIAEiKr~SPS~G~i~~~~d~~~----~a~~ye-~GA~aiSVLTd~~~F~-Gs~~~l~~vr~~-~~ 101 (251)
T d1i4na_ 30 RFLEVLS-GKERVKIIAEFKKASPSAGDINADASLED----FIRMYD-ELADAISILTEKHYFK-GDPAFVRAARNL-TC 101 (251)
T ss_dssp HHHHHHC-CSSSCEEEEEECSBCSSSCBSCTTCCHHH----HHHHHH-HHCSEEEEECCCSSSC-CCTHHHHHHHTT-CC
T ss_pred hHHHHHh-cCCCCeEEEeeecCCCCCCCCcCCccHHH----HHHHHh-cCCcceEEecccCCCC-CCHHHHHHHhhc-cc
Confidence 4555553 124689999999876541 0 1111122 223222 231 1222222 246778888765 46
Q ss_pred CCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccC--ChHHHHHHHHcCCEEEEeccCCCHHHHHHHHH
Q 040734 239 YPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFR--NPGAVTKIKESKLSLLTYGRLNNVAEAVYMQH 316 (361)
Q Consensus 239 ~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~--~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~ 316 (361)
+|+..-- +-...++ +.-++..|++++.+-...+-. -.++++.++..|+.+.+= |++.+++.+.+.
T Consensus 102 ~PiLrKD---------FIid~~Q--I~ea~~~GADaiLLI~~~L~~~~l~~l~~~a~~lgle~LvE--vh~~~El~~al~ 168 (251)
T d1i4na_ 102 RPILAKD---------FYIDTVQ--VKLASSVGADAILIIARILTAEQIKEIYEAAEELGMDSLVE--VHSREDLEKVFS 168 (251)
T ss_dssp SCEEEEC---------CCCSTHH--HHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTTCEEEEE--ECSHHHHHHHHT
T ss_pred Cchhhhh---------hhhCHHH--HHHHHhhccceEEeecccccHHHHHHHHHHHHHhCCeeecc--cCCHHHHHHHhc
Confidence 7865321 1111121 345678899988766655411 248889999999999987 789999988763
Q ss_pred hcCccEEEeCC---------hHHHHHHHHHhcCCcccccccC
Q 040734 317 LMGIDGVIVDL---------VQEITEAVYDMIKPAKVVEKED 349 (361)
Q Consensus 317 ~~GVdgI~TD~---------p~~~~~~l~~~~~~~~~~~~~~ 349 (361)
..|.+-|-.|. +....+.............++|
T Consensus 169 ~~~a~iiGINnRdL~t~~vd~~~~~~L~~~ip~~~~~IaESG 210 (251)
T d1i4na_ 169 VIRPKIIGINTRDLDTFEIKKNVLWELLPLVPDDTVVVAESG 210 (251)
T ss_dssp TCCCSEEEEECBCTTTCCBCTTHHHHHGGGSCTTSEEEEESC
T ss_pred ccccceeeeeecchhccchhhhHHHHHHhhCCCCCEEEEcCC
Confidence 34666664433 3444455544444333334444
No 72
>d1xi3a_ c.1.3.1 (A:) Thiamin phosphate synthase {Archaeon (Pyrococcus furiosus) [TaxId: 2261]}
Probab=27.74 E-value=59 Score=25.35 Aligned_cols=54 Identities=17% Similarity=0.126 Sum_probs=33.1
Q ss_pred HHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEE
Q 040734 265 KVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVI 324 (361)
Q Consensus 265 ~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~ 324 (361)
+.+...+++|+|+..... ... ..+....+ .+... ..++.+++.... ..|+|.+.
T Consensus 71 ~lA~~~~adGvHl~~~~~--~~~-~~~~~~~~-~iig~-s~h~~~e~~~a~-~~g~DYi~ 124 (206)
T d1xi3a_ 71 DVALAVDADGVQLGPEDM--PIE-VAKEIAPN-LIIGA-SVYSLEEALEAE-KKGADYLG 124 (206)
T ss_dssp HHHHHHTCSEEEECTTSC--CHH-HHHHHCTT-SEEEE-EESSHHHHHHHH-HHTCSEEE
T ss_pred HHHHhccCceEeeccccc--cHh-hhhhcccc-ccccc-ccCCHHHHHHHH-hcCCCEEE
Confidence 456678899998875532 222 22222222 34455 677888887775 58999887
No 73
>d1y0ea_ c.1.2.5 (A:) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Staphylococcus aureus [TaxId: 1280]}
Probab=27.67 E-value=50 Score=25.53 Aligned_cols=40 Identities=8% Similarity=0.086 Sum_probs=31.9
Q ss_pred HHHHHH-HHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 287 GAVTKI-KESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 287 ~~v~~~-~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
+++.++ +...+.|++=|-+.+.+++.+++ ++|+|||+.-.
T Consensus 165 ~~i~~~~~~~~iPVia~GGI~t~~d~~~~~-~~GAdgV~iGs 205 (222)
T d1y0ea_ 165 QFLKDVLQSVDAKVIAEGNVITPDMYKRVM-DLGVHCSVVGG 205 (222)
T ss_dssp HHHHHHHHHCCSEEEEESSCCSHHHHHHHH-HTTCSEEEECH
T ss_pred HHHHHHHhcCCCcEEEeCCCCCHHHHHHHH-HcCCCEEEEch
Confidence 444544 45678998877899999999997 69999999875
No 74
>d2q02a1 c.1.15.4 (A:1-271) Putative cytoplasmic protein STM4435 {Salmonella typhimurium [TaxId: 90371]}
Probab=27.64 E-value=84 Score=25.04 Aligned_cols=68 Identities=10% Similarity=0.060 Sum_probs=42.5
Q ss_pred ccHHHHHHHHHhcCCcEEEcCCcc---cc---CC-hHHHHHHHHcCCEEEEecc---CCC--H------HHHHHHHHhcC
Q 040734 258 NSLEEAVKVCLEGGLQGIVSEVKG---VF---RN-PGAVTKIKESKLSLLTYGR---LNN--V------AEAVYMQHLMG 319 (361)
Q Consensus 258 ~~l~~~~~~~~~~~~~~i~~~~~~---~~---~~-~~~v~~~~~~Gl~v~~w~T---vn~--~------~~~~~~~~~~G 319 (361)
.++++.++.+++.|+++|-+.... .. .. .++-+.+++.|+.+...+. .++ + ..+.++...+|
T Consensus 18 l~lee~l~~a~~~G~dgiEl~~~~~~~~~~~~~~~~~~k~~l~~~gl~i~~l~~~~~~~~~~~~~~~~~~~~i~~a~~lG 97 (271)
T d2q02a1 18 LSIEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVG 97 (271)
T ss_dssp SCHHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHhCCCEEEEecCcccccccccCCHHHHHHHHHHcCCcEEEeecccccCCCCHHHHHHHHHHHHHHHHcC
Confidence 468999999999999998763211 00 12 3555667999999876521 222 1 11222334589
Q ss_pred ccEEEe
Q 040734 320 IDGVIV 325 (361)
Q Consensus 320 VdgI~T 325 (361)
++.|..
T Consensus 98 ~~~v~~ 103 (271)
T d2q02a1 98 ARALVL 103 (271)
T ss_dssp CSEEEE
T ss_pred CcEEEE
Confidence 998875
No 75
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}
Probab=26.99 E-value=76 Score=22.21 Aligned_cols=38 Identities=16% Similarity=0.190 Sum_probs=22.7
Q ss_pred HHHHHHHHcC--CEEEEeccCCCHHHHHHHHHhcCccEEEe
Q 040734 287 GAVTKIKESK--LSLLTYGRLNNVAEAVYMQHLMGIDGVIV 325 (361)
Q Consensus 287 ~~v~~~~~~G--l~v~~w~Tvn~~~~~~~~~~~~GVdgI~T 325 (361)
++++.+++.+ ++|.+-+...+.+...+++ ..|++.+++
T Consensus 64 el~~~l~~~~~~~piI~~t~~~~~~~~~~a~-~~Ga~dyl~ 103 (123)
T d1krwa_ 64 ALLKQIKQRHPMLPVIIMTAHSDLDAAVSAY-QQGAFDYLP 103 (123)
T ss_dssp HHHHHHHHHSSSCCEEESCCCSCHHHHHHHH-HHTEEEECS
T ss_pred HHHHHHHHhCCCCeEEEEecCCCHHHHHHHH-HcCCCeEEe
Confidence 5566665544 6667763334445555555 588888775
No 76
>d1f3ta2 c.1.6.1 (A:44-283) Eukaryotic ornithine decarboxylase {Trypanosoma brucei [TaxId: 5691]}
Probab=26.92 E-value=1.4e+02 Score=23.45 Aligned_cols=88 Identities=10% Similarity=0.135 Sum_probs=45.3
Q ss_pred HHHHHHCCCCCEEEEccCCCccccccccccHHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCE---EEEeccCC
Q 040734 230 VLIRKLQSTYPVFFLTNGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLS---LLTYGRLN 306 (361)
Q Consensus 230 ~~l~~~~p~~~~~~l~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~---v~~w~Tvn 306 (361)
+.+++..|++...|-.... +....++.....|+. +- ..++.-++.+++.|.. ++.-+...
T Consensus 10 ~~~~~~~p~v~~~YA~KaN----------~~~~il~~l~~~g~g-~d------v~S~~El~~al~~G~~~~~Iif~g~~k 72 (240)
T d1f3ta2 10 ETWKKCLPRVTPFYAVKCN----------DDWRVLGTLAALGTG-FD------CASNTEIQRVRGIGVPPEKIIYANPCK 72 (240)
T ss_dssp HHHHHHCTTEEEEEEGGGC----------CCHHHHHHHHHTTCE-EE------ECSHHHHHHHHHTTCCGGGEEECCSSC
T ss_pred HHHHHHCCCCEEEEEeccC----------CCHHHHHHHHHcCCC-eE------eccchhHHHHHHcCCCccceeeccccc
Confidence 3455666665555544332 223344455555542 21 1245556666666643 32222345
Q ss_pred CHHHHHHHHHhcCccEEEeCChHHHHHHH
Q 040734 307 NVAEAVYMQHLMGIDGVIVDLVQEITEAV 335 (361)
Q Consensus 307 ~~~~~~~~~~~~GVdgI~TD~p~~~~~~l 335 (361)
+.++++.++ +.|+.-+..|..+.+.++.
T Consensus 73 ~~~ei~~a~-~~g~~~~~~ds~~el~~i~ 100 (240)
T d1f3ta2 73 QISHIRYAR-DSGVDVMTFDCVDELEKVA 100 (240)
T ss_dssp CHHHHHHHH-HTTCCEEEECSHHHHHHHH
T ss_pred hhHHHHHHH-Hhcccceeeeehhhhhhhh
Confidence 666666665 4677666667666665543
No 77
>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.82 E-value=41 Score=27.60 Aligned_cols=41 Identities=15% Similarity=-0.029 Sum_probs=29.6
Q ss_pred hHHHHHHHHcCCEEEEeccCC-------------CHHHHHHHHHhcCccEEEeCC
Q 040734 286 PGAVTKIKESKLSLLTYGRLN-------------NVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tvn-------------~~~~~~~~~~~~GVdgI~TD~ 327 (361)
+.+++++|++|+++..| +.- ......+.+.++|||.|=-|+
T Consensus 87 ~~l~~~i~~~G~~~Giw-~~~~~~~~~~~p~~~~~~~~~~~~~~~~GvdyvK~D~ 140 (292)
T d1r46a2 87 RQLANYVHSKGLKLGIY-ADVGNKTCAGFPGSFGYYDIDAQTFADWGVDLLKFDG 140 (292)
T ss_dssp HHHHHHHHHTTCEEEEE-EESSSBCTTSSBCCTTTHHHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHhcCceeccc-CCCccccCCCCccHHHHHHHHHHHHHHcCCCeeccCC
Confidence 47899999999999999 531 123323333579999999886
No 78
>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}
Probab=26.80 E-value=1.2e+02 Score=22.69 Aligned_cols=34 Identities=15% Similarity=0.028 Sum_probs=20.7
Q ss_pred hHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCc
Q 040734 286 PGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGI 320 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GV 320 (361)
.++++.++++|+++.+- |-+....+...+..+|+
T Consensus 94 ~~~l~~L~~~g~~~~i~-T~~~~~~~~~~l~~~~l 127 (218)
T d1te2a_ 94 REAVALCKEQGLLVGLA-SASPLHMLEKVLTMFDL 127 (218)
T ss_dssp HHHHHHHHHTTCEEEEE-ESSCHHHHHHHHHHTTC
T ss_pred HHHHHHhhhcccccccc-ccccccccccccccccc
Confidence 46677777777777777 55555545444444553
No 79
>d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId: 562]}
Probab=26.74 E-value=1.4e+02 Score=23.48 Aligned_cols=82 Identities=13% Similarity=0.075 Sum_probs=52.0
Q ss_pred HHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEe-CChHHHHHHHHH
Q 040734 261 EEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIV-DLVQEITEAVYD 337 (361)
Q Consensus 261 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T-D~p~~~~~~l~~ 337 (361)
....+.+...|+..+-+..+.- ..-+.++.++++ .+.+.+= ||-+.++.+++. ++|++.++| .....+.++..+
T Consensus 30 ~~~~~al~~~Gi~~iEitl~tp-~a~~~I~~l~~~~p~~~vGaG-TV~~~~~~~~a~-~aGa~FivSP~~~~~v~~~a~~ 106 (213)
T d1wbha1 30 VPMAKALVAGGVRVLNVTLRTE-CAVDAIRAIAKEVPEAIVGAG-TVLNPQQLAEVT-EAGAQFAISPGLTEPLLKAATE 106 (213)
T ss_dssp HHHHHHHHHTTCCEEEEESCST-THHHHHHHHHHHCTTSEEEEE-SCCSHHHHHHHH-HHTCSCEEESSCCHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEeCCCh-hHHHHHHHHHHHCCCCeeecc-ccccHHHHHHHH-HCCCcEEECCCCCHHHHHHHHh
Confidence 3444555677777765554321 123556666554 4666776 999999998886 699999997 445556666666
Q ss_pred hcCCcccc
Q 040734 338 MIKPAKVV 345 (361)
Q Consensus 338 ~~~~~~~~ 345 (361)
...+.-++
T Consensus 107 ~~i~~iPG 114 (213)
T d1wbha1 107 GTIPLIPG 114 (213)
T ss_dssp SSSCEEEE
T ss_pred cCCCccCC
Confidence 55544443
No 80
>d2d1pb1 c.114.1.1 (B:1-119) tRNA 2-thiouridine synthesizing protein C, TusC {Escherichia coli [TaxId: 562]}
Probab=26.60 E-value=15 Score=26.31 Aligned_cols=50 Identities=8% Similarity=-0.039 Sum_probs=37.4
Q ss_pred CcceEEEecCCCCCCCCcchhhhcccccchHHHHHHHHhCCCCEEEEeeeeecCCcEEEEcCC
Q 040734 45 PKFLVVGHRGHGMNVLQSSDKRMQAIKENSIASFNSSAKYPLDFIEFDVQVTKDGWPVIFHDD 107 (361)
Q Consensus 45 ~~~~iiaHRG~~~~~~~~~~~~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~ 107 (361)
++.+|+-+.|-.+ -+.+.+|++.|...++-..|+.|.++.||+..+.-+.
T Consensus 2 kkv~ii~~~~P~~-------------~~~~~~al~~Ala~a~~~~~V~iff~~dGV~~l~~~~ 51 (119)
T d2d1pb1 2 KRIAFVFSTAPHG-------------TAAGREGLDALLATSALTDDLAVFFIADGVFQLLPGQ 51 (119)
T ss_dssp CCEEEEECSCTTT-------------STHHHHHHHHHHHHHTTCSCEEEEECGGGGGGGCTTC
T ss_pred cEEEEEEcCCCCC-------------cHHHHHHHHHHHHHHhCCCCEEEEEechHHHHHhcCC
Confidence 4556666666432 4578889999988877788999999999998776543
No 81
>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=26.28 E-value=71 Score=23.91 Aligned_cols=17 Identities=18% Similarity=0.243 Sum_probs=10.4
Q ss_pred hHHHHHHHHcCCEEEEe
Q 040734 286 PGAVTKIKESKLSLLTY 302 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w 302 (361)
.++++.++++|+++.+-
T Consensus 88 ~~~L~~L~~~g~~~~v~ 104 (204)
T d2go7a1 88 REVLAWADESGIQQFIY 104 (204)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred Hhhhhcccccccchhhh
Confidence 35556666666666666
No 82
>d1qapa1 c.1.17.1 (A:130-296) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=25.81 E-value=35 Score=26.28 Aligned_cols=64 Identities=20% Similarity=0.167 Sum_probs=43.3
Q ss_pred HHHHHHHHcC--CEEEEeccCCCHHHHHHHHHhcCccEEEeCC--hHHHHHHHHHhcCCcccccccCccccc
Q 040734 287 GAVTKIKESK--LSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL--VQEITEAVYDMIKPAKVVEKEDNKSLN 354 (361)
Q Consensus 287 ~~v~~~~~~G--l~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~--p~~~~~~l~~~~~~~~~~~~~~~~~~~ 354 (361)
+.++.+++.+ .++-+ -+.+.+++..++ ..|+|.|+-|. |+.+.++++.. ++....+.+|+..++
T Consensus 68 ~~~~~~~~~~~~~~IeV--Ev~~~~~~~~a~-~~g~diImLDN~~pe~~~~av~~i-~~~~~lEaSGgI~~~ 135 (167)
T d1qapa1 68 QAVEKAFWLHPDVPVEV--EVENLDELDDAL-KAGADIIMLDNFNTDQMREAVKRV-NGQARLEVSGNVTAE 135 (167)
T ss_dssp HHHHHHHHHSTTSCEEE--EESSHHHHHHHH-HTTCSEEEESSCCHHHHHHHHHTT-CTTCCEEECCCSCHH
T ss_pred hhhHHHhhcCCCceEEE--ecCcHHHHHHHH-hcCCcEEEecCCCHHHHHHHHHhc-CCceEEEEeCCCCHH
Confidence 5555555444 44444 367888888887 59999999997 78888887664 344455566665543
No 83
>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=25.61 E-value=1.1e+02 Score=21.78 Aligned_cols=37 Identities=19% Similarity=0.171 Sum_probs=24.7
Q ss_pred HHHHHHHHcC--CEEEEeccC-CCHHHHHHHHHhcCccEEEe
Q 040734 287 GAVTKIKESK--LSLLTYGRL-NNVAEAVYMQHLMGIDGVIV 325 (361)
Q Consensus 287 ~~v~~~~~~G--l~v~~w~Tv-n~~~~~~~~~~~~GVdgI~T 325 (361)
++++.+++.+ ++|++- |. .+.+...+++ ..|++.+++
T Consensus 61 e~~~~lr~~~~~~piI~l-T~~~~~~~~~~a~-~~Ga~dyl~ 100 (137)
T d1ny5a1 61 EILKWIKERSPETEVIVI-TGHGTIKTAVEAM-KMGAYDFLT 100 (137)
T ss_dssp HHHHHHHHHCTTSEEEEE-EETTCHHHHHHHH-TTTCCEEEE
T ss_pred HHHHHHHHhCCCCCEEEE-ECCCCHHHHHHHH-HcCCCEEEe
Confidence 5566666554 777777 44 4555566665 699888887
No 84
>d1dz3a_ c.23.1.1 (A:) Sporulation response regulator Spo0A {Bacillus stearothermophilus [TaxId: 1422]}
Probab=25.45 E-value=1e+02 Score=21.44 Aligned_cols=48 Identities=6% Similarity=0.138 Sum_probs=28.0
Q ss_pred HHHHHHHHc---CCEEEEeccC-CCHHHHHHHHHhcCccEEEeC--ChHHHHHHHH
Q 040734 287 GAVTKIKES---KLSLLTYGRL-NNVAEAVYMQHLMGIDGVIVD--LVQEITEAVY 336 (361)
Q Consensus 287 ~~v~~~~~~---Gl~v~~w~Tv-n~~~~~~~~~~~~GVdgI~TD--~p~~~~~~l~ 336 (361)
++++.+++. ...+.+. |. ++.....+++ +.|++++++= .++.+.+.++
T Consensus 64 e~~~~ir~~~~~~~~ii~~-t~~~~~~~~~~a~-~~Ga~~~l~KP~~~~~L~~~i~ 117 (123)
T d1dz3a_ 64 AVLERIRAGFEHQPNVIML-TAFGQEDVTKKAV-ELGASYFILKPFDMENLAHHIR 117 (123)
T ss_dssp HHHHHHHHHCSSCCEEEEE-EETTCHHHHHHHH-HTTCEEEEECSSCCTTHHHHHH
T ss_pred HHHHHHHhcCCCCCeEEEE-ECcCCHHHHHHHH-HCCCCEEEECCCCHHHHHHHHH
Confidence 566666642 2456666 44 4555556665 6999999862 2344444443
No 85
>d1v5xa_ c.1.2.4 (A:) N-(5'phosphoribosyl)antranilate isomerase, PRAI {Thermus thermophilus [TaxId: 274]}
Probab=24.17 E-value=1.3e+02 Score=23.09 Aligned_cols=62 Identities=15% Similarity=0.101 Sum_probs=32.4
Q ss_pred HHHHHHHHHhcCCcEEEcCCccccCChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 260 LEEAVKVCLEGGLQGIVSEVKGVFRNPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 260 l~~~~~~~~~~~~~~i~~~~~~~~~~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
.++..+.+...+++.+.++... ++++++.+++.=..+.+| .+++.....+. ...+|+++.|.
T Consensus 64 ~~~i~~~~~~~~~d~vQlHg~e---~~~~~~~l~~~~~iik~~-~~~~~~~~~~~--~~~~~~~L~D~ 125 (200)
T d1v5xa_ 64 PEEVLRLMEEARLQVAQLHGEE---PPEWAEAVGRFYPVIKAF-PLEGPARPEWA--DYPAQALLLDG 125 (200)
T ss_dssp HHHHHHHHHHTTCSEEEECSCC---CHHHHHHHTTTSCEEEEE-ECSSSCCGGGG--GSSCSEEEEEC
T ss_pred hhhhhhhhcccccccccccccC---CHHHHHHHhhccccceee-ccCchhhHHHh--hcchhheeecc
Confidence 4555566666677777666543 566666654433344555 45444333222 24455555543
No 86
>d1w25a1 c.23.1.1 (A:2-140) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]}
Probab=23.60 E-value=1.2e+02 Score=21.57 Aligned_cols=39 Identities=10% Similarity=0.201 Sum_probs=23.4
Q ss_pred HHHHHHHH----cCCEEEEeccCCCHHHHHHHHHhcCccEEEeC
Q 040734 287 GAVTKIKE----SKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVD 326 (361)
Q Consensus 287 ~~v~~~~~----~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD 326 (361)
++++.+++ ..++|.+-+.-++.....+++ ..|++.+++=
T Consensus 62 ~~~~~ir~~~~~~~~piI~lt~~~~~~~~~~a~-~~Ga~dyl~K 104 (139)
T d1w25a1 62 TVCRKLKDDPTTRHIPVVLITALDGRGDRIQGL-ESGASDFLTK 104 (139)
T ss_dssp HHHHHHHHSTTTTTSCEEEEECSSCHHHHHHHH-HHTCCEEEES
T ss_pred HHHHHhhhcccccCCCEEEEEcCCCHHHHHHHH-HcCCCEEEEC
Confidence 34444444 235676663345566666665 5899888873
No 87
>d1viza_ c.1.4.1 (A:) PcrB protein homolog YerE {Bacillus subtilis [TaxId: 1423]}
Probab=23.56 E-value=25 Score=28.44 Aligned_cols=42 Identities=21% Similarity=0.185 Sum_probs=29.1
Q ss_pred ChHHHHHHHHc--CCEEEEeccCCCHHHHHHHHHhcCccEEEeCCh
Q 040734 285 NPGAVTKIKES--KLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLV 328 (361)
Q Consensus 285 ~~~~v~~~~~~--Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p 328 (361)
+.+.+...++. .+++.+=+-+.++++++++. .++|||++-..
T Consensus 168 ~~~~~~~v~~~~~~~Pl~VGFGIst~e~a~~v~--~~ADgVVVGSA 211 (229)
T d1viza_ 168 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA--EHADVIVVGNA 211 (229)
T ss_dssp CHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHH--TTCSEEEECTH
T ss_pred cchhHHHHHhhccCcceEEEcccCCHHHHHHHH--cCCCEEEECHH
Confidence 45666665543 35665433699999998874 69999999763
No 88
>d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]}
Probab=23.55 E-value=1.2e+02 Score=23.36 Aligned_cols=41 Identities=20% Similarity=0.047 Sum_probs=19.1
Q ss_pred hHHHHHHHHcCCEEEEeccCCCHHHHHHHH---HhcCccEEEeCC
Q 040734 286 PGAVTKIKESKLSLLTYGRLNNVAEAVYMQ---HLMGIDGVIVDL 327 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~---~~~GVdgI~TD~ 327 (361)
+.+-....-.|+.+..+ ++++++++...+ ++.|++.|+-+.
T Consensus 107 ~~~~~~~~ll~~~i~~~-~~~~~~e~~~~v~~l~~~G~~vVVG~~ 150 (186)
T d2pjua1 107 PALVAFQKTFNLRLDQR-SYITEEDARGQINELKANGTEAVVGAG 150 (186)
T ss_dssp HHHHHHHHHHTCCEEEE-EESSHHHHHHHHHHHHHTTCCEEEESH
T ss_pred hHHHHHHHHhCCceEEE-EecCHHHHHHHHHHHHHCCCCEEECCh
Confidence 33333333445555555 455555544322 235666665554
No 89
>d1rxwa2 c.120.1.2 (A:3-219) Flap endonuclease-1 (Fen-1 nuclease) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=23.37 E-value=52 Score=26.01 Aligned_cols=44 Identities=14% Similarity=0.055 Sum_probs=19.9
Q ss_pred HHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHHHH
Q 040734 288 AVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEIT 332 (361)
Q Consensus 288 ~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~ 332 (361)
+.+.++..|+.++.= .-.-+++..++...-.||+|+|++-+.+.
T Consensus 132 ~~~lL~~~gi~~i~A-p~EAeaqcA~L~~~g~vd~v~seDsD~l~ 175 (217)
T d1rxwa2 132 AKTLLSYMGIPFVDA-PSEGEAQAAYMAAKGDVEYTGSQDYDSLL 175 (217)
T ss_dssp HHHHHHHTTCCEEEC-SSCHHHHHHHHHHTTSSSEEECSSSHHHH
T ss_pred HHHHHHHcCceEEec-CchHHHHHHHHHhCCCeEEEEecccceee
Confidence 334445556555443 22222333444322236666666655543
No 90
>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=23.35 E-value=92 Score=21.69 Aligned_cols=38 Identities=18% Similarity=0.238 Sum_probs=21.9
Q ss_pred HHHHHHHHcC--CEEEEeccCC-CHHHHHHHHHhcCccEEEeC
Q 040734 287 GAVTKIKESK--LSLLTYGRLN-NVAEAVYMQHLMGIDGVIVD 326 (361)
Q Consensus 287 ~~v~~~~~~G--l~v~~w~Tvn-~~~~~~~~~~~~GVdgI~TD 326 (361)
++++.+++.+ +.+.+- |.. +.+...+.+ ..|++++++=
T Consensus 62 el~~~ir~~~~~~piI~l-t~~~~~~~~~~a~-~~Ga~dyl~K 102 (121)
T d1ys7a2 62 SVVTALRAMDNDVPVCVL-SARSSVDDRVAGL-EAGADDYLVK 102 (121)
T ss_dssp HHHHHHHHTTCCCCEEEE-ECCCTTTCCCTTT-TTTCSEEEES
T ss_pred HHHHHHHhcCCCCEEEEE-EeeCCHHHHHHHH-HCCCCEEEEC
Confidence 4555555443 566666 433 333344554 5899998874
No 91
>d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]}
Probab=23.03 E-value=1.1e+02 Score=21.10 Aligned_cols=37 Identities=22% Similarity=0.176 Sum_probs=22.9
Q ss_pred HHHHHHHHcC--CEEEEeccCCCHHH-HHHHHHhcCccEEEe
Q 040734 287 GAVTKIKESK--LSLLTYGRLNNVAE-AVYMQHLMGIDGVIV 325 (361)
Q Consensus 287 ~~v~~~~~~G--l~v~~w~Tvn~~~~-~~~~~~~~GVdgI~T 325 (361)
++++.+++.+ ..+.+- |..+..+ ..+.+ .+|++++++
T Consensus 62 ~~~~~lr~~~~~~piI~l-t~~~~~~~~~~~~-~~Ga~~yl~ 101 (122)
T d1kgsa2 62 EILKSMRESGVNTPVLML-TALSDVEYRVKGL-NMGADDYLP 101 (122)
T ss_dssp HHHHHHHHTTCCCCEEEE-ESSCHHHHHHHTC-CCCCSEEEE
T ss_pred HHHHHHHhcCCCCcEEEE-cCCCCHHHHHHHH-HcCCceeec
Confidence 4555555543 566777 5555444 44554 689999997
No 92
>d7odca2 c.1.6.1 (A:44-283) Eukaryotic ornithine decarboxylase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.00 E-value=1.6e+02 Score=22.89 Aligned_cols=49 Identities=12% Similarity=0.211 Sum_probs=25.6
Q ss_pred ChHHHHHHHHcCCEE--EEe-ccCCCHHHHHHHHHhcCccEEEeCChHHHHHH
Q 040734 285 NPGAVTKIKESKLSL--LTY-GRLNNVAEAVYMQHLMGIDGVIVDLVQEITEA 334 (361)
Q Consensus 285 ~~~~v~~~~~~Gl~v--~~w-~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~~~ 334 (361)
++.-+..+.++|..- ++| +...+.++++.++ ..|+.-+..|....+..+
T Consensus 48 S~~El~~a~~aG~~~~~Iv~~g~~K~~~~l~~a~-~~g~~~~~~ds~~el~~i 99 (240)
T d7odca2 48 SKTEIQLVQGLGVPAERVIYANPCKQVSQIKYAA-SNGVQMMTFDSEIELMKV 99 (240)
T ss_dssp SHHHHHHHHHTTCCGGGEEECCSSCCHHHHHHHH-HTTCCEEEECSHHHHHHH
T ss_pred cchHHHHHHhcCCCccceEecCCccchHHHHHHH-HhhcccccchhHHHHHHH
Confidence 444455666666431 233 2344566666554 466665666665555443
No 93
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]}
Probab=22.61 E-value=1.7e+02 Score=23.41 Aligned_cols=135 Identities=16% Similarity=0.127 Sum_probs=65.8
Q ss_pred CHHHHHHhCCCCceEEEEEecCCccchhhhHHHHHHHHHHHHHHHhcCCCCEEEEcCCHHHHHHHHHHCC--CCCEEEEc
Q 040734 168 TLQEAFQQVDPNVGFNVELKFDDHIVYEQDYLIRVIQAILKIVFEFAENRPIIFSTFQPDAAVLIRKLQS--TYPVFFLT 245 (361)
Q Consensus 168 tL~EvL~~~~~~~~l~iEiK~~~~~~~~~~~~~~~v~~vl~~l~~~~~~~rv~~~Sf~~~~l~~l~~~~p--~~~~~~l~ 245 (361)
.+.++.+.++..-.+.+||...+...........+.+.+++.|++.+...-|++.+.....-.......| .-.+++..
T Consensus 112 ~w~~la~ryk~~p~v~~el~NEP~~~~~~~~~~~~~~~~~~~IR~~d~~~~I~v~~~~~~~~~~~~~~~~~~~~n~vys~ 191 (291)
T d1egza_ 112 FFQEMARKYGNKPNVIYEIYNEPLQVSWSNTIKPYAEAVISAIRAIDPDNLIIVGTPSWSQNVDEASRDPINAKNIAYTL 191 (291)
T ss_dssp HHHHHHHHHTTSTTEEEECCSCCCSCCTTTTHHHHHHHHHHHHHHHCSSSCEEECCHHHHTCHHHHHTSCCCSSSEEEEE
T ss_pred HHHHHHHHhCCCcceeeeeccCcCCCcchhhHHHHHHHHHHHHHhcCCCcEEEEecCCcccccchhhhcccCCCcEEEEe
Confidence 3455556666443456888876533222334567788888888888766555555433221111111111 11122211
Q ss_pred cCCCccccccccccHHHHHHHHHhcCCcEEEcCCcccc----------CChHHHHHHHHcCCEEEEeccCCC
Q 040734 246 NGGTEIFYDVRRNSLEEAVKVCLEGGLQGIVSEVKGVF----------RNPGAVTKIKESKLSLLTYGRLNN 307 (361)
Q Consensus 246 ~~~~~~~~d~~~~~l~~~~~~~~~~~~~~i~~~~~~~~----------~~~~~v~~~~~~Gl~v~~w~Tvn~ 307 (361)
.. +.......+......+...+...+...+.... .-..+++.+.++|+.-..| +.++
T Consensus 192 H~----Y~~~~~~~~~~~~~~~~~~~~Pv~vgEfG~~~~~~~~~~~~~~~~~~~~~~~~~~i~w~~W-~~~~ 258 (291)
T d1egza_ 192 HF----YAGTHGESLRNKARQALNNGIALFVTEWGTVNADGNGGVNQTETDAWVTFMRDNNISNANW-ALND 258 (291)
T ss_dssp EE----ETTTCCHHHHHHHHHHHHTTCCEEEEEEESSCTTSCSCCCHHHHHHHHHHHHHTTCCEEEE-EECC
T ss_pred cc----cCCCCchhHHHHHHHHHHcCCCeEecccCCcccCCCCCcCHHHHHHHHHHHHHcCCeEEEE-eeeC
Confidence 10 00111112333344455556554443332110 0135678888999988888 6554
No 94
>d1rd5a_ c.1.2.4 (A:) Trp synthase alpha-subunit {Maize (Zea mays) [TaxId: 4577]}
Probab=22.61 E-value=28 Score=28.86 Aligned_cols=41 Identities=15% Similarity=0.192 Sum_probs=31.2
Q ss_pred hHHHHHHHHcC-CEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 286 PGAVTKIKESK-LSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 286 ~~~v~~~~~~G-l~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
.++++.+++.. +++++=.-|.++++++++. ..|+|||+.-.
T Consensus 189 ~~~i~~ik~~t~~Pi~vGFGI~~~e~v~~~~-~~gaDGvIVGS 230 (261)
T d1rd5a_ 189 ESLIQEVKKVTNKPVAVGFGISKPEHVKQIA-QWGADGVIIGS 230 (261)
T ss_dssp HHHHHHHHHHCSSCEEEESCCCSHHHHHHHH-HTTCSEEEECH
T ss_pred HHHHHHhhhccCCCeEEEcCCCCHHHHHHHH-hcCCCEEEECH
Confidence 46778887775 5665432699999998886 68999999764
No 95
>d1m5wa_ c.1.24.1 (A:) Pyridoxine 5'-phosphate synthase {Escherichia coli [TaxId: 562]}
Probab=22.31 E-value=58 Score=26.54 Aligned_cols=37 Identities=5% Similarity=0.040 Sum_probs=28.0
Q ss_pred hHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEE
Q 040734 286 PGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVI 324 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~ 324 (361)
..+|+.+++.|++|-.+ .--++++++.+ +.+|+|.|-
T Consensus 116 ~~~i~~l~~~girvSLF-iDpd~~~i~~a-~~lGad~IE 152 (242)
T d1m5wa_ 116 RDACKRLADAGIQVSLF-IDADEEQIKAA-AEVGAPFIE 152 (242)
T ss_dssp HHHHHHHHHTTCEEEEE-ECSCHHHHHHH-HHTTCSEEE
T ss_pred HHHHHHHHhcCCeEEEE-eccchhhHHHH-hhcCcceee
Confidence 57788999999999888 44456666666 479998774
No 96
>d2j07a2 c.28.1.1 (A:2-171) DNA photolyase {Thermus thermophilus [TaxId: 274]}
Probab=22.11 E-value=49 Score=25.02 Aligned_cols=40 Identities=5% Similarity=-0.158 Sum_probs=20.4
Q ss_pred HHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCC
Q 040734 287 GAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDL 327 (361)
Q Consensus 287 ~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~ 327 (361)
++-+.+++.|..+++. .-+..+.+.+++...||+.|.++.
T Consensus 55 ~L~~~L~~~g~~L~v~-~G~~~~~l~~l~~~~~i~~V~~n~ 94 (170)
T d2j07a2 55 ALREAYRARGGALWVL-EGLPWEKVPEAARRLKAKAVYALT 94 (170)
T ss_dssp HHHHHHHHTTCCEEEE-ESCHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHhhhccccchhhh-hhhHHHHHHHHHHHhhhhHHHhhc
Confidence 3444555556665555 333333444444445666666544
No 97
>d1xm3a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Bacillus subtilis [TaxId: 1423]}
Probab=22.05 E-value=42 Score=27.50 Aligned_cols=50 Identities=14% Similarity=0.200 Sum_probs=34.7
Q ss_pred HHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEe-----------CChHHHHHHHHHh
Q 040734 287 GAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIV-----------DLVQEITEAVYDM 338 (361)
Q Consensus 287 ~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T-----------D~p~~~~~~l~~~ 338 (361)
+..+.+-+.|..|..| +-+|+--.+++. +.|+..||- ..|..+...+++.
T Consensus 116 ~Aae~Lv~eGF~VlpY-~~~D~v~ak~Le-~~Gc~avMPlgsPIGSg~Gl~n~~~l~~i~~~~ 176 (251)
T d1xm3a_ 116 KASEQLLEEGFIVLPY-TSDDVVLARKLE-ELGVHAIMPGASPIGSGQGILNPLNLSFIIEQA 176 (251)
T ss_dssp HHHHHHHHTTCCEEEE-ECSCHHHHHHHH-HHTCSCBEECSSSTTCCCCCSCHHHHHHHHHHC
T ss_pred HHHHHHHhCCcEEEEe-cCCCHHHHHHHH-HcCChhHHHhhhhhhcCCCcCChHHHHHHHhcC
Confidence 3445566789999999 778887777775 789888773 3455565555543
No 98
>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=21.62 E-value=62 Score=24.47 Aligned_cols=35 Identities=14% Similarity=0.281 Sum_probs=29.1
Q ss_pred ChHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCc
Q 040734 285 NPGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGI 320 (361)
Q Consensus 285 ~~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GV 320 (361)
.++.|+.+|++|++|+.- |-++........+.+|+
T Consensus 25 ~~~~I~~l~~~GI~v~mi-TGD~~~tA~~ia~~~Gi 59 (168)
T d1wpga2 25 VMGSIQLCRDAGIRVIMI-TGDNKGTAIAICRRIGI 59 (168)
T ss_dssp HHHHHHHHHHTTCEEEEE-CSSCHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHCcCEEEEE-CCCCHHHHHHHHHHcCC
Confidence 468899999999999999 88888877776666776
No 99
>d1ul1x2 c.120.1.2 (X:2-217) Flap endonuclease-1 (Fen-1 nuclease) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.56 E-value=62 Score=25.31 Aligned_cols=46 Identities=7% Similarity=-0.041 Sum_probs=28.4
Q ss_pred hHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEeCChHHHH
Q 040734 286 PGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIVDLVQEIT 332 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~TD~p~~~~ 332 (361)
....+.++..|+.++.= .-.-+++..++...-.||+|+|++-+.+.
T Consensus 138 ~~~~~ll~~~gv~~i~A-p~EAdaq~A~L~~~g~vd~v~S~DsD~l~ 183 (216)
T d1ul1x2 138 DECKHLLSLMGIPYLDA-PSEAEASCAALVKAGKVYAAATEDMDCLT 183 (216)
T ss_dssp HHHHHHHHHHTCCEEEC-SSCHHHHHHHHHHHTSSSEEECSCTHHHH
T ss_pred HHHHHHHHhcCeeeEec-cchHHHHHHHHHhcCceEEEEccccceec
Confidence 35566677788876543 22333445566543447889888877665
No 100
>d1ojxa_ c.1.10.1 (A:) Archaeal fructose 1,6-bisphosphate aldolase {Archaeon Thermoproteus tenax [TaxId: 2271]}
Probab=21.26 E-value=75 Score=25.67 Aligned_cols=70 Identities=9% Similarity=0.069 Sum_probs=44.9
Q ss_pred HHHhcCCcEEEcCCccc--------cCChHHHHHHHHcCCEEEEeccCC---------CHHHHHH---HHHhcCccEEEe
Q 040734 266 VCLEGGLQGIVSEVKGV--------FRNPGAVTKIKESKLSLLTYGRLN---------NVAEAVY---MQHLMGIDGVIV 325 (361)
Q Consensus 266 ~~~~~~~~~i~~~~~~~--------~~~~~~v~~~~~~Gl~v~~w~Tvn---------~~~~~~~---~~~~~GVdgI~T 325 (361)
-+.+.|++++......- ....++++++++.|+.+.+| .+- +++.+.+ ...++|+|-|=|
T Consensus 98 ~a~rlGadaV~~~v~~g~~~e~~~l~~~~~v~~e~~~~glP~v~e-~~p~g~~~~~~~~~~~v~~aaria~ElGaDivK~ 176 (251)
T d1ojxa_ 98 EAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVW-SYPRGGKVVNETAPEIVAYAARIALELGADAMKI 176 (251)
T ss_dssp HHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHHHTCCEEEE-ECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHhchhceEEEEEeCCCCchHHHHHHHHHHHHHHHHcCCeEEEE-EeecCCccccCCCHHHHHHHHHHHHHhCCCEEEe
Confidence 35567777765433221 01237889999999999888 531 2333332 223699999999
Q ss_pred CChHHHHHHHH
Q 040734 326 DLVQEITEAVY 336 (361)
Q Consensus 326 D~p~~~~~~l~ 336 (361)
.+|.....+.+
T Consensus 177 ~~p~~~~~~~~ 187 (251)
T d1ojxa_ 177 KYTGDPKTFSW 187 (251)
T ss_dssp CCCSSHHHHHH
T ss_pred cCCCcHHHHHH
Confidence 99977665554
No 101
>d1dxea_ c.1.12.5 (A:) 2-dehydro-3-deoxy-galactarate aldolase {Escherichia coli [TaxId: 562]}
Probab=20.31 E-value=88 Score=25.38 Aligned_cols=48 Identities=13% Similarity=-0.092 Sum_probs=33.9
Q ss_pred hHHHHHHHHcCCEEEEeccCCCHHHHHHHHHhcCccEEEe-CChHHHHHHHH
Q 040734 286 PGAVTKIKESKLSLLTYGRLNNVAEAVYMQHLMGIDGVIV-DLVQEITEAVY 336 (361)
Q Consensus 286 ~~~v~~~~~~Gl~v~~w~Tvn~~~~~~~~~~~~GVdgI~T-D~p~~~~~~l~ 336 (361)
.+.++.++++|+.+.++ . .+++++.+++ ++|++.|.. ++...+.+..+
T Consensus 197 ~~v~~~~~~~gk~~g~~-~-~~~~~~~~~~-~~G~~~i~~g~D~~~l~~~~~ 245 (253)
T d1dxea_ 197 QHIFNRASAHGKPSGIL-A-PVEADARRYL-EWGATFVAVGSDLGVFRSATQ 245 (253)
T ss_dssp HHHHHHHHHTTCCEEEE-C-CSHHHHHHHH-HTTCCEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCeEEe-c-CCHHHHHHHH-HcCCCEEEehHHHHHHHHHHH
Confidence 46788889999999888 3 5677887776 699998863 33444444443
Done!