Query 040736
Match_columns 448
No_of_seqs 369 out of 2938
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 18:15:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040736.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040736hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b4r_A Putative zinc metallopr 99.7 5.6E-17 1.9E-21 154.7 14.1 68 93-197 44-111 (224)
2 3i18_A LMO2051 protein; alpha- 99.4 1.3E-12 4.4E-17 108.7 11.2 86 211-302 6-93 (100)
3 2kjp_A Uncharacterized protein 99.3 4.9E-13 1.7E-17 109.7 4.5 80 213-298 2-84 (91)
4 2kl1_A YLBL protein; structure 99.3 6.1E-12 2.1E-16 103.6 9.3 81 212-298 5-88 (94)
5 2zpm_A Regulator of sigma E pr 99.3 9.5E-12 3.2E-16 101.0 10.2 68 214-286 6-73 (91)
6 2l97_A HTRA, putative serine p 99.2 4.3E-11 1.5E-15 104.9 10.4 76 204-286 50-126 (134)
7 2i6v_A General secretion pathw 99.2 2.9E-11 9.9E-16 97.8 8.3 67 212-283 19-86 (87)
8 2pzd_A Serine protease HTRA2; 99.2 5.5E-11 1.9E-15 100.6 9.2 70 211-287 34-103 (113)
9 3id1_A Regulator of sigma E pr 99.2 7.5E-11 2.6E-15 97.2 8.8 68 214-286 4-74 (95)
10 2hga_A Conserved protein MTH13 99.2 8.9E-11 3E-15 101.9 9.5 82 211-300 24-106 (125)
11 2kom_A Partitioning defective 99.2 6.6E-11 2.3E-15 101.7 8.3 102 164-276 18-121 (121)
12 3cyy_A Tight junction protein 99.1 1.5E-10 5.1E-15 93.8 7.6 67 212-284 23-92 (92)
13 2i4s_A General secretion pathw 99.1 1.8E-10 6.1E-15 96.5 8.2 66 213-283 38-104 (105)
14 2p3w_A Probable serine proteas 99.1 1.9E-10 6.4E-15 97.2 8.4 70 211-287 34-103 (112)
15 3rle_A Golgi reassembly-stacki 99.1 1.6E-10 5.4E-15 108.6 8.0 84 212-301 112-198 (209)
16 2pkt_A PDZ and LIM domain prot 99.1 8.4E-11 2.9E-15 95.5 5.0 61 212-278 27-89 (91)
17 2vsp_A PDZ domain-containing p 99.1 2.3E-10 7.8E-15 93.0 7.3 62 212-277 27-88 (91)
18 1qau_A Neuronal nitric oxide s 99.1 2.8E-10 9.7E-15 95.9 8.0 70 212-286 26-98 (112)
19 2vz5_A TAX1-binding protein 3; 99.1 2.6E-10 9E-15 100.5 8.0 70 212-284 64-133 (139)
20 2pa1_A PDZ and LIM domain prot 99.1 3.5E-10 1.2E-14 91.0 8.0 59 212-276 26-86 (87)
21 1wh1_A KIAA1095 protein; PDZ d 99.0 1.3E-10 4.4E-15 100.2 5.2 69 212-285 48-117 (124)
22 2eaq_A LIM domain only protein 99.0 1.9E-10 6.6E-15 93.0 5.2 62 212-276 28-90 (90)
23 2v90_A PDZ domain-containing p 99.0 1.6E-10 5.3E-15 94.8 4.3 62 212-277 30-91 (96)
24 1wf7_A Enigma homologue protei 99.0 2.2E-10 7.5E-15 95.3 4.9 69 213-285 30-98 (103)
25 3stj_A Protease DEGQ; serine p 99.0 8.1E-10 2.8E-14 111.6 9.3 72 211-287 262-334 (345)
26 2uzc_A Human pdlim5, PDZ and L 99.0 8.1E-10 2.8E-14 88.9 7.2 59 212-276 27-87 (88)
27 1vb7_A PDZ and LIM domain 2; P 99.0 6.7E-10 2.3E-14 90.8 6.5 62 212-277 30-91 (94)
28 3rle_A Golgi reassembly-stacki 99.0 1.6E-09 5.6E-14 101.6 9.9 84 211-299 15-102 (209)
29 2jil_A GRIP1 protein, glutamat 99.0 5.1E-10 1.8E-14 91.8 5.4 60 212-277 32-94 (97)
30 1te0_A Protease DEGS; two doma 99.0 1.2E-09 4.2E-14 108.8 9.1 70 212-286 244-314 (318)
31 1b8q_A Protein (neuronal nitri 99.0 6.4E-10 2.2E-14 96.0 5.9 70 212-286 33-105 (127)
32 2jxo_A Ezrin-radixin-moesin-bi 99.0 3.2E-10 1.1E-14 93.2 3.8 60 212-276 33-94 (98)
33 1w9e_A Syntenin 1; cell adhesi 98.9 2.1E-09 7.1E-14 96.9 9.4 92 211-312 26-119 (166)
34 3qo6_A Protease DO-like 1, chl 98.9 9.9E-10 3.4E-14 110.9 7.6 71 212-287 251-333 (348)
35 1ihj_A INAD; intermolecular di 98.9 1.2E-09 4.1E-14 89.7 6.7 61 212-276 37-98 (98)
36 2q3g_A PDZ and LIM domain prot 98.9 1.6E-09 5.4E-14 87.5 7.2 61 212-276 27-87 (89)
37 1v5l_A PDZ and LIM domain 3; a 98.9 7.2E-10 2.5E-14 92.2 5.2 60 213-278 30-91 (103)
38 3khf_A Microtubule-associated 98.9 1.2E-09 4E-14 90.0 6.3 60 213-276 35-94 (99)
39 2he4_A Na(+)/H(+) exchange reg 98.9 1.4E-09 4.7E-14 88.0 6.6 59 212-276 28-88 (90)
40 2awx_A Synapse associated prot 98.9 2.1E-09 7.1E-14 89.7 7.6 70 212-285 33-103 (105)
41 2yub_A LIMK-2, LIM domain kina 98.9 5E-10 1.7E-14 96.1 3.6 64 211-280 43-110 (118)
42 2rcz_A Tight junction protein 98.9 2E-09 6.8E-14 84.7 6.8 58 212-275 21-81 (81)
43 1y8t_A Hypothetical protein RV 98.9 2.7E-09 9.2E-14 106.4 9.4 71 211-286 241-313 (324)
44 2eeg_A PDZ and LIM domain prot 98.9 2.4E-09 8.1E-14 87.5 7.5 61 212-276 32-92 (94)
45 3sfj_A TAX1-binding protein 3; 98.9 2.8E-09 9.6E-14 88.4 7.9 61 211-274 44-104 (104)
46 1kwa_A Hcask/LIN-2 protein; PD 98.9 2.2E-09 7.7E-14 86.9 7.0 60 213-276 26-86 (88)
47 1x5q_A LAP4 protein; PDZ domai 98.9 2.3E-09 7.8E-14 90.1 7.2 63 211-277 45-107 (110)
48 3tsv_A Tight junction protein 98.9 1.6E-09 5.4E-14 93.6 6.1 61 212-277 51-114 (124)
49 2o2t_A Multiple PDZ domain pro 98.9 8.1E-10 2.8E-14 93.9 3.9 63 212-277 49-112 (117)
50 1rgw_A ZAsp protein; PDZ, cyph 98.9 2.1E-09 7.2E-14 85.8 6.1 61 212-276 25-85 (85)
51 2w4f_A Protein LAP4; structura 98.9 1.7E-09 6E-14 88.5 5.8 61 211-277 33-95 (97)
52 1lcy_A HTRA2 serine protease; 98.9 3.7E-09 1.3E-13 105.7 9.2 68 212-286 256-323 (325)
53 3ngh_A PDZ domain-containing p 98.9 1.4E-09 4.9E-14 90.6 5.0 63 211-277 25-87 (106)
54 1n7e_A AMPA receptor interacti 98.9 4.1E-09 1.4E-13 86.5 7.7 62 212-277 30-92 (97)
55 2eeh_A PDZ domain-containing p 98.9 3.8E-09 1.3E-13 87.2 7.3 60 212-276 36-95 (100)
56 2opg_A Multiple PDZ domain pro 98.9 3.8E-09 1.3E-13 86.7 7.0 63 212-278 30-93 (98)
57 1um1_A KIAA1849 protein, RSGI 98.9 8.4E-10 2.9E-14 92.7 3.1 71 211-285 35-106 (110)
58 1d5g_A Human phosphatase HPTP1 98.9 5.6E-09 1.9E-13 85.3 7.8 61 212-276 33-94 (96)
59 2vsv_A Rhophilin-2; scaffold p 98.8 5.3E-09 1.8E-13 88.5 7.8 58 213-275 45-104 (109)
60 3qik_A Phosphatidylinositol 3, 98.8 2.3E-09 7.9E-14 89.4 5.3 59 211-272 38-98 (101)
61 2i04_A Membrane-associated gua 98.8 5.1E-09 1.7E-13 83.6 7.2 59 212-273 25-85 (85)
62 2f5y_A Regulator of G-protein 98.8 5.6E-09 1.9E-13 84.7 7.4 62 212-277 24-85 (91)
63 2jre_A C60-1 PDZ domain peptid 98.8 2.2E-09 7.7E-14 89.7 5.2 62 212-277 44-106 (108)
64 1g9o_A NHE-RF; PDZ domain, com 98.8 4.7E-09 1.6E-13 84.9 6.9 62 212-276 27-88 (91)
65 2fcf_A Multiple PDZ domain pro 98.8 5E-09 1.7E-13 86.7 7.2 59 212-276 39-100 (103)
66 2fne_A Multiple PDZ domain pro 98.8 6E-09 2E-13 89.0 7.8 62 212-277 53-115 (117)
67 2koj_A Partitioning defective 98.8 6.4E-09 2.2E-13 87.4 7.7 63 212-277 39-103 (111)
68 4amh_A Disks large homolog 1; 98.8 1.4E-08 4.9E-13 84.9 9.8 61 212-276 32-93 (106)
69 1v5q_A GRIP1 homolog, glutamat 98.8 3.5E-09 1.2E-13 90.9 6.1 61 212-277 45-109 (122)
70 1uf1_A KIAA1526 protein; PDZ d 98.8 1.2E-09 4.2E-14 94.4 3.3 70 212-286 46-115 (128)
71 2kv8_A RGS12, regulator of G-p 98.8 4.9E-09 1.7E-13 83.4 6.5 58 212-275 23-82 (83)
72 2edz_A PDZ domain-containing p 98.8 2.5E-09 8.5E-14 90.6 5.0 68 212-283 38-105 (114)
73 3bpu_A Membrane-associated gua 98.8 5.1E-09 1.7E-13 84.3 6.5 60 212-276 27-87 (88)
74 2vwr_A Ligand of NUMB protein 98.8 7E-09 2.4E-13 84.7 7.2 61 212-276 29-90 (95)
75 3cbz_A Dishevelled-2; PDZ doma 98.8 5.2E-09 1.8E-13 87.9 6.5 63 211-276 32-97 (108)
76 2kjd_A Sodium/hydrogen exchang 98.8 5.8E-10 2E-14 96.2 0.5 69 212-285 33-105 (128)
77 1wi2_A Riken cDNA 2700099C19; 98.8 6.4E-09 2.2E-13 86.6 6.9 60 212-276 41-100 (104)
78 2g5m_B Neurabin-2; spinophilin 98.8 1.8E-09 6.3E-14 91.1 3.6 70 212-285 35-105 (113)
79 2r4h_A Membrane-associated gua 98.8 1E-08 3.5E-13 86.7 8.0 62 212-277 49-111 (112)
80 1whd_A RGS3, regulator of G-pr 98.8 7.5E-09 2.6E-13 85.6 7.1 60 212-275 36-95 (100)
81 2i1n_A Discs, large homolog 3; 98.8 7.8E-09 2.7E-13 85.5 7.1 63 211-277 33-96 (102)
82 3r68_A Na(+)/H(+) exchange reg 98.8 7.6E-09 2.6E-13 84.2 7.0 59 212-276 29-89 (95)
83 2ego_A General receptor for ph 98.8 1E-08 3.4E-13 84.0 7.7 59 212-274 37-95 (96)
84 3pv2_A DEGQ; trypsin fold, PDZ 98.8 1.1E-08 3.8E-13 106.8 9.9 70 212-286 282-352 (451)
85 1ueq_A Membrane associated gua 98.8 1.1E-08 3.8E-13 87.8 8.2 62 212-276 44-107 (123)
86 2d90_A PDZ domain containing p 98.8 6.7E-09 2.3E-13 86.0 6.6 61 212-276 30-90 (102)
87 2fe5_A Presynaptic protein SAP 98.8 9.5E-09 3.3E-13 83.5 7.4 61 212-276 33-94 (94)
88 1uep_A Membrane associated gua 98.8 3.5E-09 1.2E-13 88.0 4.8 62 212-276 34-97 (103)
89 1wif_A RSGI RUH-020, riken cDN 98.8 6.1E-09 2.1E-13 90.5 6.3 60 212-274 49-110 (126)
90 2ejy_A 55 kDa erythrocyte memb 98.8 6E-09 2.1E-13 86.3 6.0 59 212-274 36-95 (97)
91 1wha_A KIAA0147 protein, scrib 98.8 1E-08 3.6E-13 85.3 7.4 61 212-276 38-99 (105)
92 2djt_A Unnamed protein product 98.8 6.3E-09 2.2E-13 86.4 6.1 61 212-276 38-99 (104)
93 3r0h_A INAD, inactivation-NO-a 98.8 2E-08 6.7E-13 93.1 9.9 100 212-314 45-150 (206)
94 4a8c_A Periplasmic PH-dependen 98.8 1.7E-08 5.7E-13 105.0 10.1 70 212-286 263-333 (436)
95 2jik_A Synaptojanin-2 binding 98.8 1.2E-08 4.2E-13 84.1 7.4 61 212-276 37-98 (101)
96 2byg_A Channel associated prot 98.8 1E-08 3.4E-13 87.5 7.0 61 212-276 54-115 (117)
97 1p1d_A PDZ45, glutamate recept 98.8 2.5E-08 8.6E-13 92.1 10.2 62 212-276 36-99 (196)
98 2edp_A Fragment, shroom family 98.8 1E-08 3.5E-13 84.8 6.8 59 212-276 35-95 (100)
99 2dls_A PDZ-rhogef, RHO guanine 98.8 8.5E-09 2.9E-13 84.1 6.1 60 212-276 29-88 (93)
100 1ujd_A KIAA0559 protein; PDZ d 98.8 6.9E-09 2.4E-13 88.4 5.7 62 212-277 49-111 (117)
101 1wfg_A Regulating synaptic mem 98.8 1.4E-08 4.7E-13 88.4 7.7 62 212-276 65-128 (131)
102 1uit_A Human discs large 5 pro 98.8 3.5E-09 1.2E-13 90.0 3.8 64 212-280 42-106 (117)
103 2iwq_A Multiple PDZ domain pro 98.8 1.3E-08 4.4E-13 87.7 7.4 61 212-276 59-120 (123)
104 1va8_A Maguk P55 subfamily mem 98.8 6.7E-09 2.3E-13 87.9 5.5 62 212-277 48-110 (113)
105 1vae_A Rhophilin 2, rhophilin, 98.8 7.2E-09 2.5E-13 87.8 5.6 56 213-273 37-94 (111)
106 2iwn_A Multiple PDZ domain pro 98.8 1.5E-08 5.2E-13 82.5 7.3 61 212-276 33-94 (97)
107 2dmz_A INAD-like protein; PDZ 98.8 8.5E-09 2.9E-13 89.1 6.0 63 212-278 46-109 (129)
108 2dm8_A INAD-like protein; PDZ 98.7 1.5E-08 5E-13 85.8 7.3 62 212-277 43-105 (116)
109 3axa_A Afadin, nectin-3, prote 98.7 1.4E-08 4.9E-13 84.6 7.2 63 211-277 37-100 (106)
110 4a8c_A Periplasmic PH-dependen 98.7 2.3E-08 7.8E-13 104.0 10.3 70 212-287 363-432 (436)
111 4fgm_A Aminopeptidase N family 98.7 1.4E-08 4.9E-13 109.5 9.0 70 212-287 496-566 (597)
112 1x6d_A Interleukin-16; PDZ dom 98.7 3.3E-09 1.1E-13 90.4 3.3 65 212-279 42-107 (119)
113 3qe1_A Sorting nexin-27, G pro 98.7 1.4E-08 4.9E-13 84.6 7.1 61 212-276 43-103 (107)
114 1m5z_A GRIP, AMPA receptor int 98.7 2E-08 6.9E-13 81.1 7.8 59 212-274 32-90 (91)
115 2qg1_A Multiple PDZ domain pro 98.7 1.7E-08 5.9E-13 81.7 7.3 61 212-276 29-90 (92)
116 1q3o_A Shank1; PDZ, GKAP, pept 98.7 2E-08 7E-13 84.1 8.0 57 212-274 45-103 (109)
117 1wfv_A Membrane associated gua 98.7 8E-09 2.7E-13 85.4 5.3 61 212-276 36-97 (103)
118 2yuy_A RHO GTPase activating p 98.7 5.3E-09 1.8E-13 90.3 4.3 61 212-276 61-121 (126)
119 1wi4_A Synip, syntaxin binding 98.7 1.1E-08 3.9E-13 86.1 6.3 62 212-276 41-106 (109)
120 1uew_A Membrane associated gua 98.7 1E-08 3.5E-13 86.7 5.9 61 213-277 44-105 (114)
121 1uez_A KIAA1526 protein; PDZ d 98.7 5.6E-09 1.9E-13 86.3 4.0 59 212-276 35-94 (101)
122 2q9v_A Membrane-associated gua 98.7 8.9E-09 3.1E-13 83.1 5.1 61 212-275 27-89 (90)
123 2iwo_A Multiple PDZ domain pro 98.7 5.6E-09 1.9E-13 89.6 4.0 63 212-278 53-116 (120)
124 1q7x_A PDZ2B domain of PTP-BAS 98.7 1.2E-08 4E-13 85.4 5.7 62 212-277 42-104 (108)
125 2h2b_A Tight junction protein 98.7 1.3E-08 4.5E-13 84.8 6.0 60 212-277 39-99 (107)
126 3num_A Serine protease HTRA1; 98.7 1.5E-09 5.3E-14 108.7 0.0 69 212-287 254-322 (332)
127 2yt7_A Amyloid beta A4 precurs 98.7 2.1E-08 7.1E-13 83.1 6.8 60 212-274 37-98 (101)
128 2d92_A INAD-like protein; PDZ 98.7 1.9E-08 6.5E-13 84.3 6.6 60 212-274 44-104 (108)
129 2kpk_A Membrane-associated gua 98.7 1.9E-08 6.7E-13 87.1 6.9 62 212-276 43-106 (129)
130 2db5_A INAD-like protein; PDZ 98.7 2.5E-08 8.4E-13 86.1 7.4 62 212-276 54-116 (128)
131 1v62_A KIAA1719 protein; struc 98.7 1.5E-08 5.1E-13 86.3 5.9 60 213-276 43-103 (117)
132 3o46_A Maguk P55 subfamily mem 98.7 2.7E-08 9.3E-13 80.9 7.0 61 212-276 28-89 (93)
133 1y7n_A Amyloid beta A4 precurs 98.7 2.5E-08 8.6E-13 81.2 6.7 56 215-274 34-89 (90)
134 1mfg_A ERB-B2 interacting prot 98.7 3.5E-08 1.2E-12 80.5 7.6 60 211-275 34-93 (95)
135 3i4w_A Disks large homolog 4; 98.7 2.2E-08 7.4E-13 82.9 6.3 61 212-276 35-96 (104)
136 1qav_A Alpha-1 syntrophin (res 98.7 3.7E-08 1.3E-12 79.5 7.6 58 212-273 30-88 (90)
137 2e7k_A Maguk P55 subfamily mem 98.7 2.2E-08 7.6E-13 81.4 6.2 59 212-275 29-88 (91)
138 1uhp_A Hypothetical protein KI 98.7 6.4E-08 2.2E-12 80.8 9.1 61 211-275 40-101 (107)
139 1nf3_C PAR-6B; semi-CRIB motif 98.7 2.7E-08 9.3E-13 86.1 6.7 61 212-276 65-126 (128)
140 2edv_A FERM and PDZ domain-con 98.7 3E-08 1E-12 81.4 6.6 59 212-275 31-89 (96)
141 1n7t_A 99-MER peptide of densi 98.7 4.5E-08 1.5E-12 81.1 7.7 61 210-275 41-101 (103)
142 3gsl_A Disks large homolog 4; 98.7 2.5E-08 8.5E-13 91.1 6.6 63 212-278 130-193 (196)
143 3kzd_A TIAM-1, T-lymphoma inva 98.7 5.3E-08 1.8E-12 80.3 7.7 56 212-273 35-90 (94)
144 2dlu_A INAD-like protein; PDZ 98.7 2.5E-08 8.5E-13 83.8 5.9 62 212-277 38-100 (111)
145 1ujv_A Membrane associated gua 98.7 4E-08 1.4E-12 80.8 6.9 60 212-276 32-92 (96)
146 2eno_A Synaptojanin-2-binding 98.7 3.9E-08 1.3E-12 83.9 7.1 63 211-277 46-109 (120)
147 2qbw_A PDZ-fibronectin fusion 98.6 1E-07 3.5E-12 87.5 10.4 76 205-285 17-95 (195)
148 1wf8_A Neurabin-I; PDZ domain, 98.6 3.4E-08 1.2E-12 82.4 6.5 61 212-276 40-101 (107)
149 2dkr_A LIN-7 homolog B; LIN-7B 98.6 3E-08 1E-12 80.3 5.9 61 212-276 30-91 (93)
150 3l4f_D SH3 and multiple ankyri 98.6 4.9E-08 1.7E-12 85.1 7.5 61 212-276 65-125 (132)
151 2qkv_A Inactivation-NO-after-p 98.6 3.3E-08 1.1E-12 81.1 5.7 60 212-275 31-91 (96)
152 2eei_A PDZ domain-containing p 98.6 3.5E-08 1.2E-12 82.1 5.9 61 212-276 32-92 (106)
153 1x5n_A Harmonin; PDZ domain, u 98.6 5.9E-09 2E-13 88.1 1.2 66 212-284 41-109 (114)
154 3pv2_A DEGQ; trypsin fold, PDZ 98.6 5.1E-08 1.7E-12 101.8 8.4 65 212-282 386-450 (451)
155 2la8_A Inactivation-NO-after-p 98.6 4.3E-08 1.5E-12 82.2 6.4 60 212-275 25-85 (106)
156 3k1r_A Harmonin; protein-prote 98.6 4.8E-08 1.6E-12 90.3 7.3 60 212-276 110-169 (192)
157 3b76_A E3 ubiquitin-protein li 98.6 5.8E-08 2E-12 83.1 7.3 61 211-275 52-113 (118)
158 3gsl_A Disks large homolog 4; 98.6 1.3E-07 4.6E-12 86.2 10.2 67 211-283 34-105 (196)
159 3e17_A Tight junction protein 98.6 5.2E-08 1.8E-12 78.7 6.4 58 213-274 22-80 (88)
160 3nfk_A Tyrosine-protein phosph 98.6 6.3E-08 2.2E-12 80.7 7.2 60 212-274 43-107 (107)
161 2daz_A INAD-like protein; PDZ 98.6 4.7E-08 1.6E-12 83.9 6.4 62 212-277 51-113 (124)
162 4e34_A Golgi-associated PDZ an 98.6 7.3E-08 2.5E-12 77.1 7.0 58 212-273 28-86 (87)
163 1i16_A Interleukin 16, LCF; cy 98.6 3.3E-08 1.1E-12 85.8 5.3 62 212-276 57-119 (130)
164 1uju_A Scribble; PDZ domain, c 98.6 1.7E-08 5.7E-13 84.9 3.2 62 211-276 43-105 (111)
165 2qt5_A Glutamate receptor-inte 98.6 4.6E-08 1.6E-12 90.4 6.4 61 212-278 135-198 (200)
166 1fc6_A Photosystem II D1 prote 98.6 1E-07 3.4E-12 97.5 9.5 69 212-285 99-172 (388)
167 1wg6_A Hypothetical protein (r 98.6 3E-08 1E-12 85.8 4.5 62 212-276 55-123 (127)
168 2cs5_A Tyrosine-protein phosph 98.6 1.8E-08 6.3E-13 85.7 3.1 62 213-277 42-108 (119)
169 2gzv_A PRKCA-binding protein; 98.6 8.2E-08 2.8E-12 81.5 7.1 58 212-273 50-108 (114)
170 3hpk_A Protein interacting wit 98.6 7.9E-08 2.7E-12 82.6 7.0 58 212-273 45-103 (125)
171 2d8i_A T-cell lymphoma invasio 98.6 4.6E-08 1.6E-12 83.3 5.3 58 212-275 44-101 (114)
172 2ehr_A INAD-like protein; PDZ 98.6 8.2E-08 2.8E-12 81.4 6.7 61 212-276 50-111 (117)
173 1r6j_A Syntenin 1; PDZ, membra 98.6 7.6E-08 2.6E-12 77.3 6.1 55 215-273 26-80 (82)
174 2z17_A Pleckstrin homology SEC 98.6 4.5E-08 1.5E-12 81.3 4.7 56 212-271 48-103 (104)
175 1ky9_A Protease DO, DEGP, HTRA 98.5 2.6E-08 9E-13 103.9 3.4 69 212-285 286-355 (448)
176 1ufx_A KIAA1526 protein; PDZ d 98.5 4.6E-08 1.6E-12 81.5 4.2 62 212-276 32-98 (103)
177 1p1d_A PDZ45, glutamate recept 98.5 1.3E-07 4.3E-12 87.4 7.4 58 212-275 135-195 (196)
178 1um7_A Synapse-associated prot 98.5 1E-07 3.5E-12 80.0 6.0 61 212-276 39-100 (113)
179 2dc2_A GOPC, golgi associated 98.5 2E-07 6.9E-12 77.4 7.6 60 213-276 36-96 (103)
180 2csj_A TJP2 protein; PDZ domai 98.5 4.9E-08 1.7E-12 82.9 3.5 61 212-277 46-106 (117)
181 1tp5_A Presynaptic density pro 98.5 1.1E-07 3.7E-12 80.8 5.4 59 212-276 38-99 (119)
182 2qt5_A Glutamate receptor-inte 98.5 3.5E-07 1.2E-11 84.5 8.9 58 212-275 33-93 (200)
183 1v6b_A Harmonin isoform A1; st 98.5 1.8E-07 6E-12 79.8 6.3 59 213-274 44-106 (118)
184 3egg_C Spinophilin; PP1, serin 98.5 2.3E-07 7.7E-12 84.5 7.2 59 212-274 111-170 (170)
185 3suz_A Amyloid beta A4 precurs 98.4 1.3E-07 4.6E-12 96.7 5.6 80 212-299 232-315 (388)
186 3tsz_A Tight junction protein 98.4 2.5E-07 8.5E-12 94.9 6.5 61 212-275 31-92 (391)
187 2krg_A Na(+)/H(+) exchange reg 98.4 1.3E-08 4.3E-13 96.4 -2.9 70 212-285 33-105 (216)
188 4fln_A Protease DO-like 2, chl 98.4 5E-07 1.7E-11 96.1 8.4 74 212-286 277-356 (539)
189 3soe_A Membrane-associated gua 98.4 5.6E-07 1.9E-11 76.5 6.9 62 213-279 35-97 (113)
190 3r0h_A INAD, inactivation-NO-a 98.3 5.7E-07 1.9E-11 83.2 5.7 60 212-275 136-196 (206)
191 1ky9_A Protease DO, DEGP, HTRA 98.3 1.2E-07 4E-12 99.0 0.0 65 212-282 383-447 (448)
192 2lob_A Golgi-associated PDZ an 97.6 1.3E-07 4.5E-12 80.0 0.0 57 212-272 53-110 (112)
193 3k50_A Putative S41 protease; 98.2 4.7E-07 1.6E-11 93.2 4.0 57 214-277 92-148 (403)
194 3shw_A Tight junction protein 98.2 1E-06 3.6E-11 92.1 6.4 62 212-276 23-85 (468)
195 1z87_A Alpha-1-syntrophin; pro 98.2 1.2E-06 4.2E-11 85.1 6.3 61 212-276 103-164 (263)
196 1k32_A Tricorn protease; prote 97.9 9.6E-06 3.3E-10 92.0 7.0 67 212-284 748-825 (1045)
197 1w9e_A Syntenin 1; cell adhesi 97.9 1.1E-06 3.9E-11 78.8 -0.7 55 215-284 110-164 (166)
198 3gge_A PDZ domain-containing p 97.8 6E-05 2E-09 62.0 7.9 57 214-273 30-88 (95)
199 2xkx_A Disks large homolog 4; 97.8 3.2E-05 1.1E-09 85.1 7.7 62 211-276 88-150 (721)
200 2xkx_A Disks large homolog 4; 97.7 5E-05 1.7E-09 83.6 7.4 60 212-275 331-391 (721)
201 4fln_A Protease DO-like 2, chl 97.2 0.00033 1.1E-08 74.5 6.7 62 211-278 414-475 (539)
202 3suz_A Amyloid beta A4 precurs 97.2 5E-05 1.7E-09 77.6 0.0 56 215-274 318-373 (388)
203 2di4_A Zinc protease, cell div 94.4 0.0046 1.6E-07 58.9 -1.4 25 99-123 18-44 (238)
204 2jsd_A Matrix metalloproteinas 54.6 4.6 0.00016 35.2 1.6 11 99-109 110-120 (160)
205 3dor_A Protein CT_858, CPAF; m 52.0 25 0.00084 37.4 6.9 57 229-285 109-185 (583)
206 2xs4_A Karilysin protease; hyd 51.2 6.6 0.00023 34.5 2.1 11 99-109 117-127 (167)
207 2ovx_A Matrix metalloproteinas 49.8 6 0.00021 34.6 1.6 11 99-109 113-123 (159)
208 1hy7_A Stromelysin-1, MMP-3; m 49.5 6.1 0.00021 35.0 1.6 11 99-109 115-125 (173)
209 1cge_A Fibroblast collagenase; 46.8 6 0.0002 34.9 1.1 11 99-109 113-123 (168)
210 1hv5_A Stromelysin 3; inhibiti 43.2 7.3 0.00025 34.2 1.1 11 99-109 115-125 (165)
211 1i76_A MMP-8;, neutrophil coll 41.3 9.8 0.00034 33.3 1.6 11 99-109 114-124 (163)
212 1slm_A Stromelysin-1; hydrolas 36.0 13 0.00044 35.2 1.6 11 99-109 197-207 (255)
213 1c7k_A NCNP, zinc endoprotease 35.8 17 0.00057 31.2 2.1 11 99-109 79-89 (132)
214 1uf1_A KIAA1526 protein; PDZ d 33.9 19 0.00066 29.6 2.2 49 262-314 6-60 (128)
215 1y93_A Macrophage metalloelast 33.4 16 0.00053 31.9 1.6 11 99-109 110-120 (159)
216 3ayu_A 72 kDa type IV collagen 32.6 14 0.00047 32.6 1.1 11 99-109 116-126 (167)
217 1rm8_A MMP-16, matrix metallop 32.6 20 0.00067 31.5 2.1 11 99-109 119-129 (169)
218 2ce7_A Cell division protein F 32.3 7 0.00024 40.5 -1.0 24 100-123 275-300 (476)
219 2y6d_A Matrilysin; hydrolase; 32.0 20 0.00069 31.7 2.1 11 99-109 117-127 (174)
220 3cqb_A Probable protease HTPX 29.3 21 0.00071 28.9 1.6 11 99-109 85-95 (107)
221 2j3t_D Trafficking protein par 28.6 38 0.0013 31.4 3.4 49 225-273 52-100 (219)
222 1sat_A Serratia protease; para 27.3 21 0.00073 36.8 1.6 12 98-109 171-182 (471)
223 3p1v_A Metallo-endopeptidase; 27.2 17 0.00057 37.0 0.7 13 98-110 288-300 (407)
224 1g9k_A Serralysin; beta jelly 26.4 23 0.00077 36.6 1.6 11 99-109 165-175 (463)
225 2cki_A Ulilysin; metalloprotea 25.2 21 0.00073 33.9 1.1 11 99-109 164-174 (262)
226 1k7i_A PROC, secreted protease 25.2 25 0.00084 36.4 1.6 12 98-109 183-194 (479)
227 830c_A MMP-13, MMP-13; matrix 24.8 27 0.00092 30.8 1.6 11 99-109 115-125 (168)
228 1kap_P Alkaline protease; calc 24.8 29 0.001 35.9 2.1 11 99-109 181-191 (479)
229 3edh_A Bone morphogenetic prot 23.8 29 0.00098 31.6 1.6 11 99-109 89-99 (201)
230 3lqb_A Hatching enzyme, LOC792 23.4 30 0.001 31.5 1.6 11 99-109 95-105 (199)
231 3ma2_D Matrix metalloproteinas 23.2 30 0.001 30.9 1.6 10 99-108 124-133 (181)
232 4dv8_A Lethal factor; endopept 22.5 42 0.0015 34.5 2.7 17 98-114 431-447 (526)
233 3sks_A Putative oligoendopepti 22.3 33 0.0011 36.1 2.0 20 97-116 353-372 (567)
234 3lq0_A Proastacin; metallopept 21.0 35 0.0012 31.9 1.6 11 99-109 122-132 (235)
235 3ahn_A Oligopeptidase, PZ pept 20.7 37 0.0013 35.4 2.0 17 98-114 351-367 (564)
236 2ejq_A Hypothetical protein TT 20.3 39 0.0013 28.7 1.6 19 99-117 91-111 (130)
No 1
>3b4r_A Putative zinc metalloprotease MJ0392; intramembrane protease, CBS domain, hydrolase, metal-binding, transmembrane; 3.30A {Methanocaldococcus jannaschii}
Probab=99.71 E-value=5.6e-17 Score=154.72 Aligned_cols=68 Identities=22% Similarity=0.396 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhCCccceEeeeccceeeeeccCceeEEEeEEeccceeecCCCCCCCCCCCCChhhhhCC
Q 040736 93 AGVLTAIIIVHESGHFLAAYLQGIHVSKFAVGFGPILAKFSANNVEYSLRAFPLGGFVGFPDNDPESGIPVDDENLLKNR 172 (448)
Q Consensus 93 ~~~l~~~i~vHE~gH~~~A~~~gv~V~~fsiGfGp~l~~~~~~~t~y~i~~~plGg~v~~~~~~~~~~~~~~~~~~f~~~ 172 (448)
++.+.+++++||+||+++||++|+++++ +.++|+|||+++.+ .
T Consensus 44 ~l~l~~~v~~HElgH~~~A~~~G~~~~~--------------------i~l~p~Gg~~~~~~-----------------~ 86 (224)
T 3b4r_A 44 FILLFVSVVLHELGHSYVAKKYGVKIEK--------------------ILLLPIGGVAMMDK-----------------I 86 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCCC--------------------EEECSSSCBCCCCC-----------------C
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcccc--------------------EEEEEeeeEEEccc-----------------C
Confidence 4456777899999999999999999998 56789999998621 1
Q ss_pred CccceeeeeecchhHHHHHHHHHHh
Q 040736 173 PILDRVIVISAGVVANIVFAFVIIF 197 (448)
Q Consensus 173 ~~~~r~~v~~aGp~~N~l~a~v~~~ 197 (448)
++++++.|++|||++|+++|++++.
T Consensus 87 ~~~~~~~ValAGPl~nl~la~~~~~ 111 (224)
T 3b4r_A 87 PKEGELRIGIAGPLVSFIIGIVLLI 111 (224)
T ss_dssp CSSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccceeeeeeeHHHHHHHHHHHHHH
Confidence 2378999999999999999987654
No 2
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=99.41 E-value=1.3e-12 Score=108.69 Aligned_cols=86 Identities=24% Similarity=0.405 Sum_probs=75.2
Q ss_pred CCceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHc-CCCCcEEEEEEeCCEEEEEEEeecccC-
Q 040736 211 FPGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKK-SPKRNVLLKVARGEQQFEIGVTPDENY- 288 (448)
Q Consensus 211 ~~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~-~~g~~V~l~V~R~G~~~~l~v~p~~~~- 288 (448)
..|++|.+|.++|||++ ||++||+|++|||+++ .+++|+.+.+.. .+++++++++.|+|+..++++++....
T Consensus 6 ~~Gv~V~~V~~~spA~~-GL~~GD~I~~Ing~~v-----~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~ 79 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-VLHAGDLITEIDGNAF-----KSSQEFIDYIHSKKVGDTVKINYKHGDKNEQADIKLTAIDK 79 (100)
T ss_dssp CCCEEEEEECTTSGGGG-TCCTTCEEEEETTBCC-----SSHHHHHHHHHTSCTTCEEEEEEEETTEEEEEEEECEECST
T ss_pred CCCEEEEEeCCCCchHH-CCCCCCEEEEECCEEC-----CCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEEEEecCCC
Confidence 46899999999999996 9999999999999999 899999999987 468999999999999999888886543
Q ss_pred CCCceEEEEecCCc
Q 040736 289 DGTGKIGVQLSPNV 302 (448)
Q Consensus 289 ~~~~~lGV~~~~~~ 302 (448)
++.+.+|+.+.++.
T Consensus 80 ~~~~~iGi~~~~~~ 93 (100)
T 3i18_A 80 KGTPGIGITLVDDL 93 (100)
T ss_dssp TCCEECSEEEGGGC
T ss_pred CCCcEEeEEEecCC
Confidence 46789999877654
No 3
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=99.34 E-value=4.9e-13 Score=109.73 Aligned_cols=80 Identities=26% Similarity=0.394 Sum_probs=69.3
Q ss_pred ceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcC-CCCcEEEEEEeCCEEEEEEEeecccCC--
Q 040736 213 GVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKS-PKRNVLLKVARGEQQFEIGVTPDENYD-- 289 (448)
Q Consensus 213 gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~-~g~~V~l~V~R~G~~~~l~v~p~~~~~-- 289 (448)
|++|.+|.++|||++ ||++||+|++|||+++ .+++|+.++++.. +|+++++++.|+|+..++++++....+
T Consensus 2 Gv~V~~V~~~spA~~-GL~~GD~I~~InG~~v-----~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~~~ 75 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-KIEVGDKIISADGKNY-----QSAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEP 75 (91)
T ss_dssp CSSCCCCCCSSCCSS-CCCSSCEEEEETTBCC-----SSHHHHHHHHSSCCSSCEECEEEESSSCEECCCEECCCCTTCT
T ss_pred ceEEEEECCCChHHH-cCCCCCEEEEECCEEC-----CCHHHHHHHHHcCCCCCEEEEEEEECCEEEEEEEEEeccCCCC
Confidence 678999999999999 9999999999999999 8999999999875 689999999999999999888875433
Q ss_pred CCceEEEEe
Q 040736 290 GTGKIGVQL 298 (448)
Q Consensus 290 ~~~~lGV~~ 298 (448)
++..||+.+
T Consensus 76 gr~~~~~~~ 84 (91)
T 2kjp_A 76 DRAGIGVSL 84 (91)
T ss_dssp TSCSCCSCC
T ss_pred CcceeEEee
Confidence 456667654
No 4
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=99.31 E-value=6.1e-12 Score=103.55 Aligned_cols=81 Identities=23% Similarity=0.294 Sum_probs=69.8
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcC-CCCcEEEEEEeCCEEEEEEEeecccCC-
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKS-PKRNVLLKVARGEQQFEIGVTPDENYD- 289 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~-~g~~V~l~V~R~G~~~~l~v~p~~~~~- 289 (448)
.|++|.+|.++|||++ ||++||+|++|||+++ .+++|+.++++.. +++++++++.|+|+..++++++....+
T Consensus 5 ~Gv~V~~V~~~spA~~-GL~~GD~Il~InG~~v-----~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~~ 78 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-RLEAGDRIAAIDGQPI-----NTSEQIVSYVREKQAGDRVRVTFIRDRKQHEAELVLKPFPHH 78 (94)
T ss_dssp CCEECCCCCTTSTTBT-TBCTTCEEEEETTBCC-----CCHHHHHHHHHHSCTTCCEEEEEEETTEEEEEEECCCBCSSC
T ss_pred CcEEEEEECCCChHHh-CCCCCCEEEEECCEEC-----CCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEEEEeeCCCC
Confidence 5789999999999999 9999999999999999 8899999999875 689999999999999999998875433
Q ss_pred -CCceEEEEe
Q 040736 290 -GTGKIGVQL 298 (448)
Q Consensus 290 -~~~~lGV~~ 298 (448)
++..+|+.+
T Consensus 79 ~~~~~~~~~~ 88 (94)
T 2kl1_A 79 PNQIGLGVTL 88 (94)
T ss_dssp TTCBCCSCC-
T ss_pred CCCcEEEEEe
Confidence 455666654
No 5
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=99.31 E-value=9.5e-12 Score=101.04 Aligned_cols=68 Identities=25% Similarity=0.444 Sum_probs=62.7
Q ss_pred eeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEEEEEEEeecc
Q 040736 214 VLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQFEIGVTPDE 286 (448)
Q Consensus 214 vvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~~~l~v~p~~ 286 (448)
++|.+|.++|||+++||++||+|++|||+++ .+++|+.+.+...+++++++++.|+|+..++++++..
T Consensus 6 ~~V~~v~~~spA~~aGl~~GD~I~~ing~~v-----~~~~~~~~~l~~~~g~~v~l~v~R~g~~~~~~v~~~~ 73 (91)
T 2zpm_A 6 PVLENVQPNSAASXAGLQAGDRIVXVDGQPL-----TQWVTFVMLVRDNPGXSLALEIERQGSPLSLTLIPES 73 (91)
T ss_dssp CBCSEECTTSHHHHTTCCTTCEEEEETTEEC-----CCHHHHHHHHHHCTTCCEEEEEEETTEEEEEEECCEE
T ss_pred eEEEEECCCChHHhcCCCCCCEEEEECCeEc-----CCHHHHHHHHhcCCCCeEEEEEEECCeEEEEEEEEee
Confidence 4788999999999999999999999999999 8999999999877788999999999999999888754
No 6
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=99.22 E-value=4.3e-11 Score=104.89 Aligned_cols=76 Identities=20% Similarity=0.249 Sum_probs=66.4
Q ss_pred cccccCCCCceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcC-CCCcEEEEEEeCCEEEEEEE
Q 040736 204 GLPVQDAFPGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKS-PKRNVLLKVARGEQQFEIGV 282 (448)
Q Consensus 204 G~p~~~~~~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~-~g~~V~l~V~R~G~~~~l~v 282 (448)
|++... ..|++|.+|.++|||+ |||++||+|++|||+++ .+++|+.+.+... +|+++++++.|+|+..++++
T Consensus 50 gl~~~~-~~g~~V~~V~~~spA~-aGL~~GD~I~~inG~~v-----~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v 122 (134)
T 2l97_A 50 NIPSNV-TSGVIVRSVQSNMPAN-GHLEKYDVITKVDDKEI-----ASSTDLQSALYNHSIGDTIKITYYRNGKEETTSI 122 (134)
T ss_dssp SSCSSS-CSCEEEEECSTTSGGG-TTSCSSCEEEEETTEEC-----CCHHHHHHHHHHSSTTCEEEEEEEETTEEEEEEE
T ss_pred CCCcCC-CCCEEEEEECCCCchH-HCCCCCCEEEEECCEEc-----CCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEE
Confidence 555321 3578999999999999 99999999999999999 8999999998875 68999999999999999998
Q ss_pred eecc
Q 040736 283 TPDE 286 (448)
Q Consensus 283 ~p~~ 286 (448)
++..
T Consensus 123 ~~~~ 126 (134)
T 2l97_A 123 KLNK 126 (134)
T ss_dssp ECCC
T ss_pred EEcc
Confidence 8764
No 7
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.21 E-value=2.9e-11 Score=97.84 Aligned_cols=67 Identities=19% Similarity=0.237 Sum_probs=59.1
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHc-CCCCcEEEEEEeCCEEEEEEEe
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKK-SPKRNVLLKVARGEQQFEIGVT 283 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~-~~g~~V~l~V~R~G~~~~l~v~ 283 (448)
.|+.|..+.|+|||++|||++||+|++|||+++ .+++|+.+.+.. .+++++++++.|+|+..+++++
T Consensus 19 ~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v-----~~~~d~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~ 86 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDL-----TDPNVMNTLFQSMNEMTEMSLTVERDGQQHDVYIQ 86 (87)
T ss_dssp EEEEEEECSCHHHHHHTTCCTTCEEEEETTEET-----TCHHHHHHHHHTGGGCSEEEEEEEETTEEEEEEEE
T ss_pred EEEEEEeCCCCCHHHHCCCCCCCEEEEECCEEC-----CCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEE
Confidence 367788888999999999999999999999999 899999988876 4578999999999988777664
No 8
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=99.19 E-value=5.5e-11 Score=100.57 Aligned_cols=70 Identities=30% Similarity=0.510 Sum_probs=63.5
Q ss_pred CCceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEEEEEEEeeccc
Q 040736 211 FPGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQFEIGVTPDEN 287 (448)
Q Consensus 211 ~~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~~~l~v~p~~~ 287 (448)
..|++|.+|.++|||+++||++||+|++|||+++ .+++|+.+.++. ++++++++.|+|+..++++++...
T Consensus 34 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v-----~~~~~~~~~l~~--~~~v~l~v~R~g~~~~~~v~~~~~ 103 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMV-----QNAEDVYEAVRT--QSQLAVQIRRGRETLTLYVTPEVT 103 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEEC-----CSHHHHHHHHHH--CSSEEEEEEETTEEEEEEECCEEC
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEEC-----CCHHHHHHHHhC--CCeEEEEEEECCEEEEEEEEEeec
Confidence 3688999999999999999999999999999999 889999998875 678999999999999999888643
No 9
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=99.17 E-value=7.5e-11 Score=97.23 Aligned_cols=68 Identities=19% Similarity=0.169 Sum_probs=58.8
Q ss_pred eeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCC-CCcEEEEEEeCC--EEEEEEEeecc
Q 040736 214 VLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSP-KRNVLLKVARGE--QQFEIGVTPDE 286 (448)
Q Consensus 214 vvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~-g~~V~l~V~R~G--~~~~l~v~p~~ 286 (448)
++|.+|.++|||++|||++||+|++|||+++ .+|+|+.+.+..+. +++++++|.|+| +..+++++...
T Consensus 4 p~V~~V~~~spA~~aGl~~GD~I~~ing~~v-----~~~~d~~~~l~~~~~~~~v~l~v~R~g~~~~~~~~l~l~~ 74 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQIAPGTELKAVDGIET-----PDWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLRH 74 (95)
T ss_dssp CBEEEECTTSHHHHTTCCTTCEEEEETTEEC-----SSHHHHHHHHHHTTTCSEEEEEEECTTCCCCEEEEEECTT
T ss_pred CEEEeeCCCCHHHHcCCCCCCEEEEECCEEC-----CCHHHHHHHHHHhcCCCcEEEEEEECCCCceEEEEEEccc
Confidence 4789999999999999999999999999999 89999999997654 478999999987 45666666643
No 10
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=99.16 E-value=8.9e-11 Score=101.87 Aligned_cols=82 Identities=26% Similarity=0.285 Sum_probs=67.6
Q ss_pred CCceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHc-CCCCcEEEEEEeCCEEEEEEEeecccCC
Q 040736 211 FPGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKK-SPKRNVLLKVARGEQQFEIGVTPDENYD 289 (448)
Q Consensus 211 ~~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~-~~g~~V~l~V~R~G~~~~l~v~p~~~~~ 289 (448)
..|++|.+|.++|||+++ |++||+|++|||+++ .+++|+.+.+.. .+++++++++ |+|+ .++++.+....+
T Consensus 24 ~~gv~V~~V~~~spA~~a-L~~GD~Il~InG~~v-----~~~~dl~~~l~~~~~g~~v~l~V-R~g~-~~v~l~~~~~~~ 95 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKV-LTPGLVIESINGMPT-----SNLTTYSAALKTISVGEVINITT-DQGT-FHLKTGRNPNNS 95 (125)
T ss_dssp CCCEEEEEECSSSGGGGT-SCTTCEEEEETTEEC-----SSHHHHHHHHTTCCTTCEEEEEE-TTEE-EEEECCBCSSSC
T ss_pred CCceEEEEECCCChHHHh-cCCCCEEEEECCEEc-----CCHHHHHHHHHhcCCCCEEEEEE-ECCE-EEEEEeccCCCC
Confidence 367899999999999999 999999999999999 899999999885 6788999999 9998 555554432224
Q ss_pred CCceEEEEecC
Q 040736 290 GTGKIGVQLSP 300 (448)
Q Consensus 290 ~~~~lGV~~~~ 300 (448)
+.+.+|+.+.+
T Consensus 96 ~~~~lGi~~~~ 106 (125)
T 2hga_A 96 SRAYMGIRTSN 106 (125)
T ss_dssp CSCBCCEEEEC
T ss_pred CceEEEEEecC
Confidence 45689988654
No 11
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.16 E-value=6.6e-11 Score=101.74 Aligned_cols=102 Identities=20% Similarity=0.199 Sum_probs=75.7
Q ss_pred CChhhhhCCCccceeeeeecchhHHHHHHHHHHhhhhccccccccCCCCceeecccCCCChhhhCC-CCCCCEEEEECCe
Q 040736 164 DDENLLKNRPILDRVIVISAGVVANIVFAFVIIFTQVLSVGLPVQDAFPGVLVPEVRALSAASRDG-LFPGDVILSVNGN 242 (448)
Q Consensus 164 ~~~~~f~~~~~~~r~~v~~aGp~~N~l~a~v~~~~~~~~~G~p~~~~~~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~ 242 (448)
|....|..++.|+++.+.++|+..|+ .+.+..+........+++|.+|.++|||+++| |++||+|++|||+
T Consensus 18 D~~~~y~~~~~~~~~~v~l~~~~~~l--------G~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~ 89 (121)
T 2kom_A 18 YFQGSYNTKKIGKRLNIQLKKGTEGL--------GFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGV 89 (121)
T ss_dssp ---CCCCCCCSCEEEEEEEECCTTCC--------CEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTE
T ss_pred CccccccCccCCeEEEEEEEcCCCcE--------eEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCE
Confidence 34467888999999999999998763 11111111100112568999999999999999 9999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHcC-CCCcEEEEEEeCCE
Q 040736 243 EFPKTGPNVVSELVNAIKKS-PKRNVLLKVARGEQ 276 (448)
Q Consensus 243 ~V~~~~~~s~~dl~~~L~~~-~g~~V~l~V~R~G~ 276 (448)
++.+ .+++++.+.++.. ++++++++|.|+|+
T Consensus 90 ~v~~---~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 121 (121)
T 2kom_A 90 DLVG---KSQEEVVSLLRSTKMEGTVSLLVFRQED 121 (121)
T ss_dssp ECTT---SCHHHHHHHHHHCCSSCEEEEEEEECCC
T ss_pred EcCC---CCHHHHHHHHhcCCCCCEEEEEEEeCCC
Confidence 9922 2368999888875 48899999999874
No 12
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.10 E-value=1.5e-10 Score=93.85 Aligned_cols=67 Identities=28% Similarity=0.436 Sum_probs=50.8
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCC--CHHHHHHHHHcCCCCcEEEEEEeCCEEEEEEEee
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPN--VVSELVNAIKKSPKRNVLLKVARGEQQFEIGVTP 284 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~--s~~dl~~~L~~~~g~~V~l~V~R~G~~~~l~v~p 284 (448)
.|++|.+|.++|||+++| |++||+|++|||+++ . +++|+.+.++... +++.+++.|+|+..+++++|
T Consensus 23 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v-----~~~~~~~~~~~l~~~~-~~v~l~v~r~g~~~~~~v~p 92 (92)
T 3cyy_A 23 SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVT-----ENMSLTDAKTLIERSK-GKLKMVVQRDERATLLNVPD 92 (92)
T ss_dssp EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEEC-----TTCCHHHHHHHHHTTT-TEEEEEEEC-----------
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEEC-----CCCCHHHHHHHHHcCC-CcEEEEEEeCCceeeeeCCC
Confidence 467899999999999999 999999999999999 6 8999999888644 48999999999887776653
No 13
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.10 E-value=1.8e-10 Score=96.48 Aligned_cols=66 Identities=20% Similarity=0.252 Sum_probs=58.0
Q ss_pred ceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHc-CCCCcEEEEEEeCCEEEEEEEe
Q 040736 213 GVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKK-SPKRNVLLKVARGEQQFEIGVT 283 (448)
Q Consensus 213 gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~-~~g~~V~l~V~R~G~~~~l~v~ 283 (448)
|+.|..+.|+|||+++||++||+|++|||+++ .+++|+.+.+.. .+++++++++.|+|+..+++++
T Consensus 38 G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v-----~~~~d~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~ 104 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIGLQDGDMAVALNGLDL-----TDPNVMNTLFQSMNEMTEMSLTVERDGQQHDVYIQ 104 (105)
T ss_dssp EEEEEECSCTHHHHHHTCCTTCEEEEETTEET-----TSTTHHHHHHHHHTTCSEEEEEEEETTEEEEEEEE
T ss_pred EEEEecCCCCCHHHHcCCCCCCEEEEECCEEC-----CCHHHHHHHHHhcCCCCeEEEEEEECCEEEEEEEe
Confidence 56677788888899999999999999999999 899999888875 5688999999999988877764
No 14
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=99.10 E-value=1.9e-10 Score=97.17 Aligned_cols=70 Identities=33% Similarity=0.524 Sum_probs=62.8
Q ss_pred CCceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEEEEEEEeeccc
Q 040736 211 FPGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQFEIGVTPDEN 287 (448)
Q Consensus 211 ~~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~~~l~v~p~~~ 287 (448)
..|++|.+|.++|||+++||++||+|++|||+++ .+++|+.+.+. +++++++++.|+|+..++++++...
T Consensus 34 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v-----~~~~~~~~~l~--~g~~v~l~v~R~g~~~~~~v~~~~~ 103 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPL-----VDSSELQEAVL--TESPLLLEVRRGNDDLLFSIAPEVV 103 (112)
T ss_dssp CSSEEEEEECTTSHHHHHTCCTTCEEEEETTEEC-----CSHHHHHHHHH--HCSSEEEEEEETTEEEEEEECCEEE
T ss_pred CCCeEEEEECCCChHHHCCCCCCCEEEEECCEEC-----CCHHHHHHHHh--CCCeEEEEEEECCEEEEEEEEEeee
Confidence 3588999999999999999999999999999999 89999988884 4778999999999999988887643
No 15
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.08 E-value=1.6e-10 Score=108.59 Aligned_cols=84 Identities=25% Similarity=0.340 Sum_probs=73.7
Q ss_pred CceeecccCCCChhhhCCCCC-CCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCC--EEEEEEEeecccC
Q 040736 212 PGVLVPEVRALSAASRDGLFP-GDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGE--QQFEIGVTPDENY 288 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~-GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G--~~~~l~v~p~~~~ 288 (448)
.|++|.+|.++|||++|||++ ||+|++|||+ + .+++|+.+.++..++++++++|.|++ +..+++++|+..+
T Consensus 112 ~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~-v-----~~~~~l~~~l~~~~g~~v~l~v~r~~~~~~~~v~l~p~~~~ 185 (209)
T 3rle_A 112 NVWHVLEVESNSPAALAGLRPHSDYIIGADTV-M-----NESEDLFSLIETHEAKPLKLYVYNTDTDNCREVIITPNSAW 185 (209)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTTEEEEEESSC-C-----CSSSCHHHHHHHTTTSCEEEEEEETTTTEEEEEEECCCTTS
T ss_pred cceEEEEeCCCChHHHCCCCCCCCEEEECCCE-e-----CCHHHHHHHHHhCCCCeEEEEEEECCceEEEEEEEEecCCC
Confidence 578999999999999999999 9999999998 8 88999999998888899999999965 5688888887655
Q ss_pred CCCceEEEEecCC
Q 040736 289 DGTGKIGVQLSPN 301 (448)
Q Consensus 289 ~~~~~lGV~~~~~ 301 (448)
.+.+++|+.+...
T Consensus 186 ~g~g~lG~~~~~g 198 (209)
T 3rle_A 186 GGEGSLGCGIGYG 198 (209)
T ss_dssp SSSSSSCEEEECS
T ss_pred CCceeeeEEecCc
Confidence 5788999987653
No 16
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.07 E-value=8.4e-11 Score=95.46 Aligned_cols=61 Identities=31% Similarity=0.369 Sum_probs=54.0
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHH--HHHHHHHcCCCCcEEEEEEeCCEEE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVS--ELVNAIKKSPKRNVLLKVARGEQQF 278 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~--dl~~~L~~~~g~~V~l~V~R~G~~~ 278 (448)
.+++|.+|.++|||+++||++||+|++|||+++ .+++ ++.+.++. +++++++++.|+|+..
T Consensus 27 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v-----~~~~~~~~~~~l~~-~g~~v~l~v~R~g~~~ 89 (91)
T 2pkt_A 27 QPLAISRVTPGSKAALANLCIGDVITAIDGENT-----SNMTHLEAQNRIKG-CTDNLTLTVARSEHES 89 (91)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEEEETTEEC-----TTCCHHHHHHHHHT-CSSEEEEEEEEECCCC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEEC-----CCCCHHHHHHHHHc-CCCeEEEEEEECCccc
Confidence 467899999999999999999999999999999 5555 88888887 8899999999988653
No 17
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.07 E-value=2.3e-10 Score=92.97 Aligned_cols=62 Identities=34% Similarity=0.445 Sum_probs=51.3
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQ 277 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~ 277 (448)
.+++|.+|.++|||+++||++||+|++|||+++.+ .+++|+.+.++.. ++++++++.|+++.
T Consensus 27 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~---~~~~~~~~~l~~~-g~~v~l~v~r~~~~ 88 (91)
T 2vsp_A 27 PGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLD---EPYEKVVDRIQSS-GKNVTLLVCGKKAQ 88 (91)
T ss_dssp SCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTT---SCHHHHHHHHTTS-CSEEEEEEEC----
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEECCC---CCHHHHHHHHHcC-CCEEEEEEEeCCcc
Confidence 56789999999999999999999999999999921 2899999999876 88999999998764
No 18
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.06 E-value=2.8e-10 Score=95.88 Aligned_cols=70 Identities=21% Similarity=0.367 Sum_probs=62.7
Q ss_pred CceeecccCCCChhhhCCC-CCCCEEEEECCeecCCCCCCC--HHHHHHHHHcCCCCcEEEEEEeCCEEEEEEEeecc
Q 040736 212 PGVLVPEVRALSAASRDGL-FPGDVILSVNGNEFPKTGPNV--VSELVNAIKKSPKRNVLLKVARGEQQFEIGVTPDE 286 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL-~~GDvIlsInG~~V~~~~~~s--~~dl~~~L~~~~g~~V~l~V~R~G~~~~l~v~p~~ 286 (448)
.+++|.+|.++|||+++|+ ++||+|++|||+++ .+ ++|+.+.++..+++++.+++.|+|+..++++++..
T Consensus 26 ~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v-----~~~~~~~~~~~l~~~~g~~v~l~v~R~g~~~~~~~~~~~ 98 (112)
T 1qau_A 26 PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPL-----VDLSYDSALEVLRGIASETHVVLILRGPEGFTTHLETTF 98 (112)
T ss_dssp SCEEEEEECTTSHHHHHTCCCTTCEEEEETTEEC-----TTSCHHHHHHHHHHSCSSSEEEEEEECCTTSEEEEEEEE
T ss_pred CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEEC-----CCCCHHHHHHHHHhCCCCcEEEEEEeCCcccceEeeeec
Confidence 4689999999999999998 99999999999999 55 99999999887789999999999988777777654
No 19
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.06 E-value=2.6e-10 Score=100.54 Aligned_cols=70 Identities=26% Similarity=0.272 Sum_probs=56.4
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEEEEEEEee
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQFEIGVTP 284 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~~~l~v~p 284 (448)
.|++|.+|.++|||++|||++||+|++|||+++.+ .+++|+.+.++..+|++++++|.|+|+..+++++.
T Consensus 64 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~---~~~~~~~~~l~~~~g~~v~l~v~R~g~~~~v~~~~ 133 (139)
T 2vz5_A 64 KGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTM---VTHDQARKRLTKRSEEVVRLLVTRQSLQKAVQQSM 133 (139)
T ss_dssp CCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTT---CCHHHHHHHHCCTTCSEEEEEEEECC-------CC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCC---CCHHHHHHHHHhCCCCEEEEEEEECCEEEEEEEee
Confidence 57899999999999999999999999999999921 26899999998777899999999999887766554
No 20
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.06 E-value=3.5e-10 Score=90.98 Aligned_cols=59 Identities=27% Similarity=0.428 Sum_probs=53.7
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCC--HHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNV--VSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s--~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++||++||+|++|||+++ .+ ++|+.+.++..+ +++++++.|+++
T Consensus 26 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v-----~~~~~~~~~~~l~~~~-~~v~l~v~R~~~ 86 (87)
T 2pa1_A 26 TPIMVTKVAERGKAKDADLRPGDIIVAINGESA-----EGMLHAEAQSKIRQSP-SPLRLQLDRITS 86 (87)
T ss_dssp EEEEEEEECSSSHHHHTTCCTTCEEEEETTEES-----TTCCHHHHHHHHHTCC-SSEEEEEEECCC
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEEC-----CCCCHHHHHHHHHcCC-CeEEEEEEecCC
Confidence 468999999999999999999999999999999 55 899999998766 889999999875
No 21
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.05 E-value=1.3e-10 Score=100.22 Aligned_cols=69 Identities=32% Similarity=0.468 Sum_probs=61.5
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEEEEEEEeec
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQFEIGVTPD 285 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~~~l~v~p~ 285 (448)
.|++|.+|.++|||+++| |++||+|++|||+++ .+++|+.+.++..+++++.++|.|+|+.++....++
T Consensus 48 ~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v-----~~~~~~~~~l~~~~g~~v~l~v~R~g~~~~~~~~~~ 117 (124)
T 1wh1_A 48 IGIYISEIDPNSIAAKDGRIREGDRIIQINGIEV-----QNREEAVALLTSEENKNFSLLIARPELQLDEGWMDD 117 (124)
T ss_dssp CCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBC-----CSHHHHHHHHTCSSCCSCCEEEEECSSCCCCCCCCS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-----CCHHHHHHHHHhCCCCEEEEEEEECCEEeecccCCC
Confidence 579999999999999999 999999999999999 889999999987778899999999998766555443
No 22
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.03 E-value=1.9e-10 Score=93.02 Aligned_cols=62 Identities=29% Similarity=0.387 Sum_probs=53.9
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHc-CCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKK-SPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~-~~g~~V~l~V~R~G~ 276 (448)
.|++|.+|.++|||+++||++||+|++|||+++.+ .+++|+.+.++. .++++++++|.|+|+
T Consensus 28 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~---~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 90 (90)
T 2eaq_A 28 PGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSY---NDSKEWEEAMAKAQETGHLVMDVRRYGK 90 (90)
T ss_dssp TEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCT---TCHHHHHHHHHHHHHHTEEEEEEEEEC-
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEEccC---CCHHHHHHHHHhcCCCCEEEEEEEeCCC
Confidence 57899999999999999999999999999999932 578999988875 357899999999874
No 23
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.01 E-value=1.6e-10 Score=94.80 Aligned_cols=62 Identities=27% Similarity=0.320 Sum_probs=54.2
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQ 277 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~ 277 (448)
.|++|.+|.++|||++|||++||+|++|||+++.+ .+++++.+.++.. ++++++++.|+++.
T Consensus 30 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~---~~~~~~~~~l~~~-g~~v~l~v~r~~~~ 91 (96)
T 2v90_A 30 PGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEG---LGHEETVSRIQGQ-GSCVSLTVVDPEAD 91 (96)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTT---CCHHHHHHHHHTT-TTEEEEEEECCCTT
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEECCC---CCHHHHHHHHHcC-CCEEEEEEECCCCc
Confidence 47899999999999999999999999999999921 2389999999875 88999999998854
No 24
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.01 E-value=2.2e-10 Score=95.30 Aligned_cols=69 Identities=19% Similarity=0.200 Sum_probs=57.6
Q ss_pred ceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEEEEEEEeec
Q 040736 213 GVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQFEIGVTPD 285 (448)
Q Consensus 213 gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~~~l~v~p~ 285 (448)
+++|.+|.++|||++|||++||+|++|||+++.+ .++.++.+.++.. +++++++|.|+++..+++++|.
T Consensus 30 ~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~---~~~~~~~~~~~~~-g~~v~l~v~R~g~~~~~~v~p~ 98 (103)
T 1wf7_A 30 PLTISSLKDGGKASQAHVRIGDVVLSIDGISAQG---MTHLEAQNKIKAC-TGSLNMTLQRASAAAKSEPVSS 98 (103)
T ss_dssp EEEECCCCTTCHHHHTTCCTTCBEEEETTEECSS---CCHHHHHHHHHHC-SSEEEEEECCCSCCCCCCCCCC
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCC---CCHHHHHHHHHcC-CCeEEEEEEeCCCcCCCCCCCC
Confidence 4789999999999999999999999999999922 2347777777654 7789999999998887777764
No 25
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.99 E-value=8.1e-10 Score=111.59 Aligned_cols=72 Identities=33% Similarity=0.485 Sum_probs=66.2
Q ss_pred CCceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHc-CCCCcEEEEEEeCCEEEEEEEeeccc
Q 040736 211 FPGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKK-SPKRNVLLKVARGEQQFEIGVTPDEN 287 (448)
Q Consensus 211 ~~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~-~~g~~V~l~V~R~G~~~~l~v~p~~~ 287 (448)
..|++|.+|.++|||++|||++||+|++|||+++ .+++|+.+.+.. .+|++++++|.|+|+.+++++++...
T Consensus 262 ~~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v-----~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~~ 334 (345)
T 3stj_A 262 QRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPL-----NSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDTS 334 (345)
T ss_dssp CSSEEEEEECTTSHHHHHTCCTTCEECEETTEEC-----SCHHHHHHHHHTSCTTCEEEEEEEETTEEEEEEEECEEC
T ss_pred CceEEEEEeccCChHHHcCCCCCCEEEEECCEEC-----CCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEccc
Confidence 3689999999999999999999999999999999 899999999987 57999999999999999999888643
No 26
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.98 E-value=8.1e-10 Score=88.91 Aligned_cols=59 Identities=20% Similarity=0.276 Sum_probs=51.7
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCH--HHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVV--SELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~--~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++||++||+|++|||+++ .++ +++.+.++.. ++++++++.|+++
T Consensus 27 ~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v-----~~~~~~~~~~~~~~~-g~~v~l~v~R~g~ 87 (88)
T 2uzc_A 27 MPLTISSLKDGGKAAQANVRIGDVVLSIDGINA-----QGMTHLEAQNKIKGC-TGSLNMTLQRESD 87 (88)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEEEETTEEC-----TTCCHHHHHHHHHTC-CSEEEEEEECCCC
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEEC-----CCCCHHHHHHHHHhC-CCeEEEEEEeCCC
Confidence 357899999999999999999999999999999 555 7888877754 7899999999874
No 27
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.97 E-value=6.7e-10 Score=90.80 Aligned_cols=62 Identities=24% Similarity=0.401 Sum_probs=53.5
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQ 277 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~ 277 (448)
.+++|.+|.++|||+++||++||+|++|||+++.+ .+++|+.+.++..+ +++++++.|+|+.
T Consensus 30 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~---~~~~~~~~~l~~~~-~~v~l~v~R~g~~ 91 (94)
T 1vb7_A 30 TPIIVTKVTERGKAEAADLRPGDIIVAINGQSAEN---MLHAEAQSKIRQSA-SPLRLQLDRSSGP 91 (94)
T ss_dssp EEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTT---CCHHHHHHHHHTCC-SSEEEEEECCCCC
T ss_pred CCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCC---CCHHHHHHHHHhCC-CcEEEEEEECCcC
Confidence 46899999999999999999999999999999921 23499999898765 8899999999864
No 28
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.97 E-value=1.6e-09 Score=101.60 Aligned_cols=84 Identities=29% Similarity=0.434 Sum_probs=66.4
Q ss_pred CCceeecccCCCChhhhCCCCCC-CEEEEECCeecCCCCCCCHHHHHHHH-HcCCCCcEEEEEEeCC--EEEEEEEeecc
Q 040736 211 FPGVLVPEVRALSAASRDGLFPG-DVILSVNGNEFPKTGPNVVSELVNAI-KKSPKRNVLLKVARGE--QQFEIGVTPDE 286 (448)
Q Consensus 211 ~~gvvV~~V~~gSpA~~AGL~~G-DvIlsInG~~V~~~~~~s~~dl~~~L-~~~~g~~V~l~V~R~G--~~~~l~v~p~~ 286 (448)
..|++|.+|.++|||++|||++| |+|++|||+++ .+++|+...+ ...+++++++++.|++ +..+++++|..
T Consensus 15 ~~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v-----~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~~~v~l~p~~ 89 (209)
T 3rle_A 15 TEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRL-----NKDNDTLKDLLKANVEKPVKMLIYSSKTLELRETSVTPSN 89 (209)
T ss_dssp SEEEEEEEECTTSHHHHTTCCTTTEEEEEETTEEC-----CSSSSHHHHHHHHTTTSCEEEEEEETTTCCEEEEEECCCS
T ss_pred CCEEEEEEECCCCHHHHCCCCcCCeEEEEECCEEC-----cCHHHHHHHHHhcCCCCEEEEEEEecCCceEEEEEEcccc
Confidence 35789999999999999999999 99999999999 7777776554 4467899999999965 56667776553
Q ss_pred cCCCCceEEEEec
Q 040736 287 NYDGTGKIGVQLS 299 (448)
Q Consensus 287 ~~~~~~~lGV~~~ 299 (448)
.+...+.+|+.+.
T Consensus 90 ~~~~~~~lGi~~~ 102 (209)
T 3rle_A 90 LWGGQGLLGVSIR 102 (209)
T ss_dssp SSSSSSSSCEEEE
T ss_pred cccccCccceEEe
Confidence 3334567887654
No 29
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.96 E-value=5.1e-10 Score=91.77 Aligned_cols=60 Identities=27% Similarity=0.388 Sum_probs=54.6
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCC--HHHHHHHHHcCCCCcEEEEEEeCCEE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNV--VSELVNAIKKSPKRNVLLKVARGEQQ 277 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s--~~dl~~~L~~~~g~~V~l~V~R~G~~ 277 (448)
.+++|.+|.++|||+++| |++||+|++|||+++ .+ ++++.+.++. +++++++++.|+++.
T Consensus 32 ~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v-----~~~~~~~~~~~l~~-~g~~v~l~v~R~~~~ 94 (97)
T 2jil_A 32 RPVVITSVRPGGPADREGTIKPGDRLLSVDGIRL-----LGTTHAEAMSILKQ-CGQEAALLIEYDVSE 94 (97)
T ss_dssp EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEEC-----SSCCHHHHHHHHHH-SCSEEEEEEEEECCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEEC-----CCCCHHHHHHHHHc-CCCeEEEEEEeCCCc
Confidence 468899999999999999 999999999999999 55 9999999987 789999999998764
No 30
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.96 E-value=1.2e-09 Score=108.76 Aligned_cols=70 Identities=26% Similarity=0.386 Sum_probs=65.1
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHc-CCCCcEEEEEEeCCEEEEEEEeecc
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKK-SPKRNVLLKVARGEQQFEIGVTPDE 286 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~-~~g~~V~l~V~R~G~~~~l~v~p~~ 286 (448)
.|++|.+|.++|||++|||++||+|++|||+++ .+++|+.+.++. .+|+++++++.|+|+..++++++..
T Consensus 244 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v-----~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~ 314 (318)
T 1te0_A 244 QGIVVNEVSPDGPAANAGIQVNDLIISVDNKPA-----ISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQE 314 (318)
T ss_dssp CCEEEEEECTTSTTTTTCCCTTCCEEEETTEEC-----CCHHHHHHHHHTSCTTCEEEEEEESSSCEEEEEEECEE
T ss_pred CcEEEEEeCCCChHHHCCCCCCCEEEEECCEEc-----CCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEcc
Confidence 689999999999999999999999999999999 899999999987 6789999999999999999988754
No 31
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.95 E-value=6.4e-10 Score=95.96 Aligned_cols=70 Identities=21% Similarity=0.367 Sum_probs=63.1
Q ss_pred CceeecccCCCChhhhCCC-CCCCEEEEECCeecCCCCCCC--HHHHHHHHHcCCCCcEEEEEEeCCEEEEEEEeecc
Q 040736 212 PGVLVPEVRALSAASRDGL-FPGDVILSVNGNEFPKTGPNV--VSELVNAIKKSPKRNVLLKVARGEQQFEIGVTPDE 286 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL-~~GDvIlsInG~~V~~~~~~s--~~dl~~~L~~~~g~~V~l~V~R~G~~~~l~v~p~~ 286 (448)
.+++|.+|.++|||+++|+ ++||+|++|||+++ .+ ++|+.+.++..+++++++++.|+|+..++++++..
T Consensus 33 ~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v-----~~~~~~~~~~~l~~~~g~~v~l~v~R~g~~~~~~~~~~~ 105 (127)
T 1b8q_A 33 PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPL-----VDLSYDSALEVLRGIASETHVVLILRGPEGFTTHLETTF 105 (127)
T ss_dssp SCEEECCCSSSSSHHHHSSCCTTTCCCEETTEEC-----SSSCHHHHHHHHHSCCSSCEEEEEECCCCSEEECCCCCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEEC-----CCCCHHHHHHHHHhCCCCeEEEEEEeCCceEEEEEEEEe
Confidence 4689999999999999999 99999999999999 55 99999999887789999999999998888877643
No 32
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.95 E-value=3.2e-10 Score=93.24 Aligned_cols=60 Identities=32% Similarity=0.408 Sum_probs=54.1
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCC--HHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNV--VSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s--~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++||++||+|++|||+++ .+ ++|+.+.++..+++.+.+++.|+|+
T Consensus 33 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v-----~~~~~~~~~~~l~~~~~~~~~l~v~R~g~ 94 (98)
T 2jxo_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCM-----EGKQHGDVVSAIRAGGDETKLLVVDRETD 94 (98)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTEEC-----TTCCHHHHHHHHHTTTTEEEEEECCHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEEC-----CCCCHHHHHHHHHhCCCcEEEEEEECCch
Confidence 478999999999999999999999999999999 55 9999999988777778899988764
No 33
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.95 E-value=2.1e-09 Score=96.94 Aligned_cols=92 Identities=25% Similarity=0.326 Sum_probs=68.0
Q ss_pred CCceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHH-HH-HHHHcCCCCcEEEEEEeCCEEEEEEEeecccC
Q 040736 211 FPGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSE-LV-NAIKKSPKRNVLLKVARGEQQFEIGVTPDENY 288 (448)
Q Consensus 211 ~~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~d-l~-~~L~~~~g~~V~l~V~R~G~~~~l~v~p~~~~ 288 (448)
..|++|.+|.++|||++|||++||+|++|||+++ .++++ +. ..++..++++++++++|+++..+++++++
T Consensus 26 ~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v-----~~~~~~~~~~~~~~~~~~~v~l~vr~~~~~~~v~l~~~--- 97 (166)
T 1w9e_A 26 DNGIFVQLVQANSPASLVGLRFGDQVLQINGENC-----AGWSSDKAHKVLKQAFGEKITMTIRDRPFERTITMHKD--- 97 (166)
T ss_dssp TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEEC-----TTCCHHHHHHHHHHCCSSEEEEEEECCTTCEEEEEECC---
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEEC-----CCCCHHHHHHHHhcCCCCEEEEEEEcCCCcEEEEEecC---
Confidence 3678999999999999999999999999999999 67766 54 44455677899999955548888888753
Q ss_pred CCCceEEEEecCCcceeeeecCCH
Q 040736 289 DGTGKIGVQLSPNVKISKVLPKNL 312 (448)
Q Consensus 289 ~~~~~lGV~~~~~~~~~~~~~~~~ 312 (448)
....+|+.+... .+..+.+.++
T Consensus 98 -~~~~lG~~~~~g-~v~~v~~~s~ 119 (166)
T 1w9e_A 98 -STGHVGFIFKNG-KITSIVKDSS 119 (166)
T ss_dssp -TTSCCSEEEETT-EEEEECTTSH
T ss_pred -CCCcEeEEEeCC-EEEEEccCCH
Confidence 234567766433 3444444444
No 34
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=98.94 E-value=9.9e-10 Score=110.90 Aligned_cols=71 Identities=32% Similarity=0.482 Sum_probs=65.3
Q ss_pred CceeecccCCCChhhhCCCCC-----------CCEEEEECCeecCCCCCCCHHHHHHHHHc-CCCCcEEEEEEeCCEEEE
Q 040736 212 PGVLVPEVRALSAASRDGLFP-----------GDVILSVNGNEFPKTGPNVVSELVNAIKK-SPKRNVLLKVARGEQQFE 279 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~-----------GDvIlsInG~~V~~~~~~s~~dl~~~L~~-~~g~~V~l~V~R~G~~~~ 279 (448)
.|++|.+|.++|||++|||++ ||+|++|||+++ .+++|+.+.+.. ++|++++++|.|+|+.++
T Consensus 251 ~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v-----~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~ 325 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKV-----SNGSDLYRILDQCKVGDEVTVEVLRGDHKEK 325 (348)
T ss_dssp SSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCC-----SSSHHHHHHHTTCCTTCEEEEEEECSSSEEE
T ss_pred ceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEe-----CCHHHHHHHHHhCCCcCEEEEEEEECCEEEE
Confidence 589999999999999999999 999999999999 899999999965 568999999999999999
Q ss_pred EEEeeccc
Q 040736 280 IGVTPDEN 287 (448)
Q Consensus 280 l~v~p~~~ 287 (448)
+++++...
T Consensus 326 ~~v~l~~~ 333 (348)
T 3qo6_A 326 ISVTLEPK 333 (348)
T ss_dssp EEEECEEC
T ss_pred EEEEEccC
Confidence 98888654
No 35
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.93 E-value=1.2e-09 Score=89.69 Aligned_cols=61 Identities=25% Similarity=0.384 Sum_probs=51.7
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+.+++.+.++. ++++++++|.|+|+
T Consensus 37 ~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~---~~~~~~~~~l~~-~g~~v~l~v~R~g~ 98 (98)
T 1ihj_A 37 TGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRN---STEQAVIDLIKE-ADFKIELEIQTFDK 98 (98)
T ss_dssp EEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTT---CCHHHHHHHHHH-SCSEEEEEEEEC--
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHhc-CCCeEEEEEEeCCC
Confidence 468899999999999999 99999999999999922 234888888876 78899999999874
No 36
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.93 E-value=1.6e-09 Score=87.49 Aligned_cols=61 Identities=20% Similarity=0.254 Sum_probs=52.0
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++||++||+|++|||+++.+ .+++++.+.++.. ++++++++.|+++
T Consensus 27 ~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~---~~~~~~~~~~~~~-g~~v~l~v~R~~~ 87 (89)
T 2q3g_A 27 VPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGS---LTHIEAQNKIRAC-GERLSLGLSRAIT 87 (89)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGG---CCHHHHHHHHHTC-TTEEEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCC---CCHHHHHHHHHhC-CCEEEEEEEeCCC
Confidence 45789999999999999999999999999999932 2678888877754 7789999999875
No 37
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.93 E-value=7.2e-10 Score=92.23 Aligned_cols=60 Identities=27% Similarity=0.444 Sum_probs=54.6
Q ss_pred ceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCC--HHHHHHHHHcCCCCcEEEEEEeCCEEE
Q 040736 213 GVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNV--VSELVNAIKKSPKRNVLLKVARGEQQF 278 (448)
Q Consensus 213 gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s--~~dl~~~L~~~~g~~V~l~V~R~G~~~ 278 (448)
+++|.+|.++|||++|||++||+|++|||+++ .+ ++|+.+.++.. +++++++|.|+++..
T Consensus 30 ~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v-----~~~~~~~~~~~l~~~-g~~v~l~v~R~g~~~ 91 (103)
T 1v5l_A 30 PLVITRITPGSKAAAANLCPGDVILAIDGFGT-----ESMTHADAQDRIKAA-SYQLCLKIDRAETRL 91 (103)
T ss_dssp EEECSCBCTTSTTGGGTCCTTCBEEEETTEEC-----SSCCHHHHHHHHTTC-CSEEECEECCCTTTT
T ss_pred CeEEEEECCCCHHHHcCCCCCCEEEEECCEEC-----CCCCHHHHHHHHHhC-CCeEEEEEEECCeEc
Confidence 67899999999999999999999999999999 66 99999999876 889999999988643
No 38
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.92 E-value=1.2e-09 Score=90.02 Aligned_cols=60 Identities=25% Similarity=0.276 Sum_probs=53.0
Q ss_pred ceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 213 GVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 213 gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
|++|.+|.++|||++|||++||+|++|||+++.+ .+++++.+.++ .+++++++++.|+++
T Consensus 35 g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~---~~~~~~~~~l~-~~g~~v~l~v~r~~~ 94 (99)
T 3khf_A 35 HHVVWSVEDGSPAQEAGLRAGDLITHINGESVLG---LVHMDVVELLL-KSGNKISLRTTALEN 94 (99)
T ss_dssp EEEEEEECTTSHHHHHTCCTTCEEEEETTEECTT---CCHHHHHHHHH-HSCSEEEEEEECSCS
T ss_pred CeEEEEECCCCHHHHcCCCCCCEEEEECCEECCC---CCHHHHHHHHh-cCCCEEEEEEEECCC
Confidence 5689999999999999999999999999999921 38899998888 568899999999775
No 39
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.92 E-value=1.4e-09 Score=88.01 Aligned_cols=59 Identities=31% Similarity=0.427 Sum_probs=52.7
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCH--HHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVV--SELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~--~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.|++|.+|.++|||+++||++||+|++|||+++ .++ +|+.+.++.. ++++.+++.|++.
T Consensus 28 ~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v-----~~~~~~~~~~~l~~~-~~~v~l~v~r~~~ 88 (90)
T 2he4_A 28 PGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNV-----EGLRHAEVVASIKAR-EDEARLLVVGPST 88 (90)
T ss_dssp SSEEEEEECTTSHHHHHTCCTTCEEEEETTEEC-----TTSCHHHHHHHHTTS-SSEEEEEEECCCC
T ss_pred CCEEEEEECCCChHHHCCCCCCCEEEEECCEEC-----CCCCHHHHHHHHHcC-CCcEEEEEEccCC
Confidence 578999999999999999999999999999999 555 8998888865 7899999998764
No 40
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.92 E-value=2.1e-09 Score=89.66 Aligned_cols=70 Identities=29% Similarity=0.335 Sum_probs=53.5
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEEEEEEEeec
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQFEIGVTPD 285 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~~~l~v~p~ 285 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++...++.. +++++++|.|+++.....++|.
T Consensus 33 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~---~~~~~~~~~~~~~-~~~v~l~v~R~~~~~~~~~~p~ 103 (105)
T 2awx_A 33 NSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEE---VTHEEAVTALKNT-SDFVYLKVAKPTSMYISRHHHH 103 (105)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT---CBHHHHHHHHHSC-CSEEEEEEECCCC---------
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCC---CCHHHHHHHHHcC-CCeEEEEEEcCCCCCCcccccc
Confidence 478999999999999999 99999999999999932 4577877777754 7899999999998888777764
No 41
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.91 E-value=5e-10 Score=96.08 Aligned_cols=64 Identities=28% Similarity=0.468 Sum_probs=57.6
Q ss_pred CCceeecccCC--CChhhhCCCCCCCEEEEECCeecCCCCCCCH--HHHHHHHHcCCCCcEEEEEEeCCEEEEE
Q 040736 211 FPGVLVPEVRA--LSAASRDGLFPGDVILSVNGNEFPKTGPNVV--SELVNAIKKSPKRNVLLKVARGEQQFEI 280 (448)
Q Consensus 211 ~~gvvV~~V~~--gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~--~dl~~~L~~~~g~~V~l~V~R~G~~~~l 280 (448)
..|++|.+|.+ +|||++|||++||+|++|||+++ .++ +|+.+.++.. +++++++|.|+++..++
T Consensus 43 ~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v-----~~~~~~dl~~~l~~~-g~~v~l~v~R~g~~~~~ 110 (118)
T 2yub_A 43 ATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPV-----RTLRVEEVEDAIKQT-SQTLQLLIEHDPVPQRL 110 (118)
T ss_dssp CCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBT-----TTSCHHHHHHHHHCC-SSCEEEEEEECSSCCCC
T ss_pred CCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEEC-----CCcCHHHHHHHHHhC-CCEEEEEEEECCEEEee
Confidence 36889999999 99999999999999999999999 777 9999999877 88999999999876543
No 42
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.91 E-value=2e-09 Score=84.73 Aligned_cols=58 Identities=31% Similarity=0.491 Sum_probs=50.3
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCC--CHHHHHHHHHcCCCCcEEEEEEeCC
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPN--VVSELVNAIKKSPKRNVLLKVARGE 275 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~--s~~dl~~~L~~~~g~~V~l~V~R~G 275 (448)
.|++|.+|.++|||+++| |++||+|++|||+++ . +++++.+.++... +++++++.|+|
T Consensus 21 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v-----~~~~~~~~~~~l~~~~-~~v~l~v~R~g 81 (81)
T 2rcz_A 21 SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVT-----ENMSLTDAKTLIERSK-GKLKMVVQRDE 81 (81)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEEC-----TTCCHHHHHHHHHTST-TEEEEEEEC--
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEEC-----CCCCHHHHHHHHHCCC-CeEEEEEEeCC
Confidence 467899999999999999 999999999999999 6 8999999888654 48999998865
No 43
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.91 E-value=2.7e-09 Score=106.44 Aligned_cols=71 Identities=27% Similarity=0.306 Sum_probs=64.9
Q ss_pred CCceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHc-CCCCcEEEEEEe-CCEEEEEEEeecc
Q 040736 211 FPGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKK-SPKRNVLLKVAR-GEQQFEIGVTPDE 286 (448)
Q Consensus 211 ~~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~-~~g~~V~l~V~R-~G~~~~l~v~p~~ 286 (448)
..|++|.+|.++|||++||||+||+|++|||+++ .+++|+.+.+.. .+|++++++|.| +|+.+++++++..
T Consensus 241 ~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v-----~~~~~l~~~l~~~~~g~~v~l~v~R~~g~~~~~~v~~~~ 313 (324)
T 1y8t_A 241 TLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPI-----NSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGK 313 (324)
T ss_dssp SSSEEEEEECTTSTTTTTTCCTTCEEEEETTEEC-----CSHHHHHHHHHTSCTTCEEEEEEECSSCCEEEEEEECEE
T ss_pred CCceEEEEECCCChHHHcCCCCCCEEEEECCEEC-----CCHHHHHHHHHhcCCCCEEEEEEEECCCCEEEEEEEEcc
Confidence 4678999999999999999999999999999999 899999999976 578999999999 9999988888764
No 44
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.91 E-value=2.4e-09 Score=87.51 Aligned_cols=61 Identities=30% Similarity=0.346 Sum_probs=51.3
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||++|||++||+|++|||+++.+ .++.++.+.++. .+++++++|.|+++
T Consensus 32 ~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~---~~~~~~~~~~~~-~g~~v~l~v~R~g~ 92 (94)
T 2eeg_A 32 APLTISRVHAGSKAALAALCPGDLIQAINGESTEL---MTHLEAQNRIKG-CHDHLTLSVSSGPS 92 (94)
T ss_dssp SCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTT---CCHHHHHHHHHT-CCSCEEEEEECCSS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCeEEEEEEeCCC
Confidence 45789999999999999999999999999999922 235777777765 67889999999875
No 45
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.90 E-value=2.8e-09 Score=88.44 Aligned_cols=61 Identities=28% Similarity=0.300 Sum_probs=53.7
Q ss_pred CCceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeC
Q 040736 211 FPGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARG 274 (448)
Q Consensus 211 ~~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~ 274 (448)
..|++|.+|.++|||+++||++||+|++|||+++.+ .+++|+.+.++..+++++++++.|+
T Consensus 44 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~---~~~~~~~~~l~~~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 44 DKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTM---VTHDQARKRLTKRSEEVVRLLVTRQ 104 (104)
T ss_dssp CCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTT---CCHHHHHHHHTCTTCSEEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCC---CCHHHHHHHHHhCCCCEEEEEEEcC
Confidence 357899999999999999999999999999999932 4578999999877788999999884
No 46
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.90 E-value=2.2e-09 Score=86.85 Aligned_cols=60 Identities=18% Similarity=0.285 Sum_probs=53.1
Q ss_pred ceeecccCCCChhhh-CCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 213 GVLVPEVRALSAASR-DGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 213 gvvV~~V~~gSpA~~-AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
+++|.+|.++|||++ +||++||+|++|||+++.+ .+++|+.+.++..++ ++++++.|+++
T Consensus 26 ~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~---~~~~~~~~~l~~~~~-~v~l~v~r~~~ 86 (88)
T 1kwa_A 26 HCIVARIMHGGMIHRQGTLHVGDEIREINGISVAN---QTVEQLQKMLREMRG-SITFKIVPSYR 86 (88)
T ss_dssp GEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGG---SCHHHHHHHHHHCCE-EEEEEEECCCC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHhcCCC-cEEEEEECCcC
Confidence 578999999999999 8999999999999999921 289999999998776 89999998765
No 47
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.90 E-value=2.3e-09 Score=90.06 Aligned_cols=63 Identities=27% Similarity=0.370 Sum_probs=52.0
Q ss_pred CCceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEE
Q 040736 211 FPGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQ 277 (448)
Q Consensus 211 ~~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~ 277 (448)
..+++|.+|.++|||+++||++||+|++|||+++.+ .+..+....++. ++++++++|.|+|+.
T Consensus 45 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~---~~~~~~~~~~~~-~g~~v~l~v~R~g~~ 107 (110)
T 1x5q_A 45 DEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQG---AEHHEAVEALRG-AGTAVQMRVWRESGP 107 (110)
T ss_dssp CCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTT---CCHHHHHHHHHS-CCSEEEEEEEECSSC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCC---cCHHHHHHHhhC-CCCeEEEEEEECCcc
Confidence 467899999999999999999999999999999922 234555555554 789999999999864
No 48
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.89 E-value=1.6e-09 Score=93.63 Aligned_cols=61 Identities=28% Similarity=0.376 Sum_probs=54.5
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCH--HHHHHHHHc-CCCCcEEEEEEeCCEE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVV--SELVNAIKK-SPKRNVLLKVARGEQQ 277 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~--~dl~~~L~~-~~g~~V~l~V~R~G~~ 277 (448)
.|++|.+|.++|||++|||++||+|++|||+++ .++ +|+.+.+.. .++++++++|.|+++.
T Consensus 51 ~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v-----~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~ 114 (124)
T 3tsv_A 51 VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDF-----TNIIREEAVLFLLDLPKGEEVTILAQKKKDV 114 (124)
T ss_dssp SCEEEEEECTTCHHHHTTCCTTEEEEEETTEEC-----SSCCHHHHHHHHHHSCTTCEEEEEEEECHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEEC-----CCCCHHHHHHHHHhcCCCCEEEEEEEECCch
Confidence 578999999999999999999999999999999 666 899888876 6788999999998753
No 49
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.88 E-value=8.1e-10 Score=93.88 Aligned_cols=63 Identities=33% Similarity=0.503 Sum_probs=54.8
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQ 277 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~ 277 (448)
.|++|.+|.++|||+++| |++||+|++|||+++.. ..+++++.+.++. .++++++++.|+++.
T Consensus 49 ~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~--~~~~~~~~~~l~~-~~~~v~l~v~R~~~~ 112 (117)
T 2o2t_A 49 LGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQ--TITHQQAISILQK-AKDTVQLVIARGSLP 112 (117)
T ss_dssp EEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCT--TSCHHHHHHHHHH-CCSEEEEEEESSCCG
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCC--CCCHHHHHHHHHc-CCCEEEEEEEeCCcc
Confidence 478999999999999999 99999999999999920 1389999998876 578999999998864
No 50
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.88 E-value=2.1e-09 Score=85.80 Aligned_cols=61 Identities=20% Similarity=0.287 Sum_probs=50.0
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++||++||+|++|||+++.+ .+.+++.+.++. .++++++++.|+++
T Consensus 25 ~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~---~~~~~~~~~~~~-~~~~v~l~v~R~~~ 85 (85)
T 1rgw_A 25 MPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDT---MTHLEAQNKIKS-ASYNLSLTLQKSKR 85 (85)
T ss_dssp SCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTT---CCHHHHHHHHTT-CSSCEEEEEESCCC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCC---cCHHHHHHHHHc-CCCeEEEEEEeCCC
Confidence 35789999999999999999999999999999922 234777777764 45679999999863
No 51
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.88 E-value=1.7e-09 Score=88.46 Aligned_cols=61 Identities=26% Similarity=0.404 Sum_probs=50.5
Q ss_pred CCceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHH--HHHHHcCCCCcEEEEEEeCCEE
Q 040736 211 FPGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSEL--VNAIKKSPKRNVLLKVARGEQQ 277 (448)
Q Consensus 211 ~~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl--~~~L~~~~g~~V~l~V~R~G~~ 277 (448)
..+++|.+|.++|||+++||++||+|++|||+++ .+++++ ...++ .+++++++++.|+|+.
T Consensus 33 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v-----~~~~~~~~~~~~~-~~g~~v~l~v~R~g~~ 95 (97)
T 2w4f_A 33 DEGIFISRVSEEGPAARAGVRVGDKLLEVNGVAL-----QGAEHHEAVEALR-GAGTAVQMRVWRERET 95 (97)
T ss_dssp BCSEEEEEECTTSHHHHHTCCTTCEEEEETTEEC-----TTCCHHHHHHHHH-TSCSEEEEEEECCSSC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEEC-----CCcCHHHHHHHHh-CCCCeEEEEEEeCCcc
Confidence 3578999999999999999999999999999999 555443 33333 3789999999999864
No 52
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=98.88 E-value=3.7e-09 Score=105.70 Aligned_cols=68 Identities=31% Similarity=0.536 Sum_probs=62.8
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEEEEEEEeecc
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQFEIGVTPDE 286 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~~~l~v~p~~ 286 (448)
.|++|.+|.++|||++|||++||+|++|||+++ .+++|+.+.++. ++++++++.|+|+.+++++++..
T Consensus 256 ~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v-----~~~~~l~~~l~~--~~~v~l~v~R~g~~~~~~v~~~~ 323 (325)
T 1lcy_A 256 HGVLIHKVILGSPAHRAGLRPGDVILAIGEQMV-----QNAEDVYEAVRT--QSQLAVQIRRGRETLTLYVTPEV 323 (325)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTEEC-----CSHHHHHHHHTT--CSSEEEEEEETTEEEEEEECCEE
T ss_pred CCeEEEEeCcCChHHHCCCCCCCEEEEECCEEc-----CCHHHHHHHHhC--CCeEEEEEEECCEEEEEEEEEec
Confidence 589999999999999999999999999999999 899999998875 58899999999999999988753
No 53
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.87 E-value=1.4e-09 Score=90.62 Aligned_cols=63 Identities=27% Similarity=0.401 Sum_probs=52.9
Q ss_pred CCceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEE
Q 040736 211 FPGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQ 277 (448)
Q Consensus 211 ~~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~ 277 (448)
..|++|.+|.++|||+++||++||+|++|||+++.+ .+.+++.+.++ ..++++++++.|+++.
T Consensus 25 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~---~~~~~~~~~l~-~~g~~v~l~v~r~~~~ 87 (106)
T 3ngh_A 25 TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDK---EEHAQVVELVR-KSGNSVTLLVLDGDSY 87 (106)
T ss_dssp CCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTT---SCHHHHHHHHH-HTTTEEEEEEECHHHH
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCC---CCHHHHHHHHH-hCCCEEEEEEEECCee
Confidence 357899999999999999999999999999999932 23458888887 4678999999997753
No 54
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.87 E-value=4.1e-09 Score=86.50 Aligned_cols=62 Identities=21% Similarity=0.379 Sum_probs=54.1
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQ 277 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~ 277 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++ ..++++++++.|+++.
T Consensus 30 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~---~~~~~~~~~l~-~~g~~v~l~v~R~~~~ 92 (97)
T 1n7e_A 30 DPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKG---KPLSEAIHLLQ-MAGETVTLKIKKQTDA 92 (97)
T ss_dssp SCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTT---CCHHHHHHHHH-TCCSEEEEEEECCCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCC---CCHHHHHHHHH-cCCCeEEEEEEeCCCC
Confidence 468899999999999999 99999999999999932 35789988887 5788999999998863
No 55
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.86 E-value=3.8e-09 Score=87.25 Aligned_cols=60 Identities=28% Similarity=0.395 Sum_probs=52.0
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++||++||+|++|||+++.+ .+++++.+.++. ++++++++.|+|+
T Consensus 36 ~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~---~~~~~~~~~~~~--~~~v~l~v~R~g~ 95 (100)
T 2eeh_A 36 LGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLES---TTMGSAVKVLTS--SSRLHMMVRRMGS 95 (100)
T ss_dssp CCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSS---CCHHHHHHHHHS--CSSEEEEEEECSC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCC---CCHHHHHHhhcC--CCEEEEEEEECCc
Confidence 47899999999999999999999999999999932 236888887765 7899999999886
No 56
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.86 E-value=3.8e-09 Score=86.69 Aligned_cols=63 Identities=33% Similarity=0.570 Sum_probs=53.1
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEEE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQF 278 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~~ 278 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++.. ++++++++.|+++..
T Consensus 30 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~---~~~~~~~~~~~~~-~~~v~l~v~R~~~~~ 93 (98)
T 2opg_A 30 GAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRK---ATHDEAINVLRQT-PQRVRLTLYRDEAPY 93 (98)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT---CCHHHHHHHHHTC-CSEEEEEEEECSSCC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCC---CCHHHHHHHHHhC-CCeEEEEEEcCCCCC
Confidence 478999999999999999 99999999999999932 3467888777754 478999999988643
No 57
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.86 E-value=8.4e-10 Score=92.74 Aligned_cols=71 Identities=25% Similarity=0.329 Sum_probs=59.7
Q ss_pred CCceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEEEEEEEeec
Q 040736 211 FPGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQFEIGVTPD 285 (448)
Q Consensus 211 ~~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~~~l~v~p~ 285 (448)
..|++|.+|.++|||+++| |++||+|++|||+++.+ .++.++...++. .+++++++|.|+++..+++++|.
T Consensus 35 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~---~~~~~~~~~~~~-~~~~v~l~v~R~~~~~~~~v~~~ 106 (110)
T 1um1_A 35 APGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLG---LGYLRAVDLIRH-GGKKMRFLVAKSDVETAKKIHSG 106 (110)
T ss_dssp CSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSS---CCHHHHHHHHHT-CCSEEEEEEECCCHHHHHHHSSC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCeEEEEEEeCCcceeEEEEec
Confidence 3578999999999999999 99999999999999932 467888887775 47899999999998766666654
No 58
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.85 E-value=5.6e-09 Score=85.33 Aligned_cols=61 Identities=28% Similarity=0.455 Sum_probs=53.1
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++. .++++++++.|++.
T Consensus 33 ~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~---~~~~~~~~~l~~-~g~~v~l~v~R~~~ 94 (96)
T 1d5g_A 33 GGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEG---ATHKQAVETLRN-TGQVVHLLLEKGQS 94 (96)
T ss_dssp SCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTT---CCHHHHHHHHHS-CCSEEEEEEECCSC
T ss_pred CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCeEEEEEEcCCC
Confidence 578999999999999999 99999999999999932 377888888876 67899999999764
No 59
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.85 E-value=5.3e-09 Score=88.51 Aligned_cols=58 Identities=24% Similarity=0.233 Sum_probs=51.3
Q ss_pred ceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCC--CHHHHHHHHHcCCCCcEEEEEEeCC
Q 040736 213 GVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPN--VVSELVNAIKKSPKRNVLLKVARGE 275 (448)
Q Consensus 213 gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~--s~~dl~~~L~~~~g~~V~l~V~R~G 275 (448)
+++|.+|.++|||++|||++||+|++|||+++ . +++|+.+.++...+++++++|.|..
T Consensus 45 ~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v-----~~~~~~dv~~~i~~~~~~~v~l~V~~~~ 104 (109)
T 2vsv_A 45 PVQVHFLDPYCSASVAGAREGDYIVSIQLVDC-----KWLTLSEVMKLLKSFGEDEIEMKVVSLL 104 (109)
T ss_dssp SCEEEEECTTSHHHHTTCCTTCEEEEETTEEC-----TTCCHHHHHHHHHTTTTSCEEEEEESCC
T ss_pred CeEEEEECCCCHHHHcCCCCCCEEEEECCEEC-----CCCCHHHHHHHHHhCCCCeEEEEEEECC
Confidence 46899999999999999999999999999999 6 6799999998766667999988754
No 60
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.85 E-value=2.3e-09 Score=89.39 Aligned_cols=59 Identities=29% Similarity=0.264 Sum_probs=51.3
Q ss_pred CCceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHc--CCCCcEEEEEE
Q 040736 211 FPGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKK--SPKRNVLLKVA 272 (448)
Q Consensus 211 ~~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~--~~g~~V~l~V~ 272 (448)
..+++|.+|.++|||++|||++||+|++|||+++. ..+|+|+.+.+++ +.++++.+.|.
T Consensus 38 ~~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~---~~s~~dv~~~i~~~~~~g~~v~LLV~ 98 (101)
T 3qik_A 38 NKAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVF---LRPFSEVESILNQSFCSRRPLRLLVA 98 (101)
T ss_dssp TTEEEEEEECTTSHHHHHTCCTTCBEEEETTEEST---TSCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcC---cCCHHHHHHHHHHhhccCCeEEEEEe
Confidence 34678999999999999999999999999999982 1599999999987 46888988875
No 61
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.84 E-value=5.1e-09 Score=83.64 Aligned_cols=59 Identities=25% Similarity=0.311 Sum_probs=50.7
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCC-CCcEEEEEEe
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSP-KRNVLLKVAR 273 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~-g~~V~l~V~R 273 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++|+.+.++..+ ++++++++.|
T Consensus 25 ~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~---~~~~~~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 25 EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLG---HTHAQVVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp BCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT---CCHHHHHHHHHTSCTTCEEEEEEEC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHhCCCCCeEEEEEEC
Confidence 468999999999999999 99999999999999921 26789998888754 7889998876
No 62
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.84 E-value=5.6e-09 Score=84.73 Aligned_cols=62 Identities=27% Similarity=0.253 Sum_probs=51.1
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQ 277 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~ 277 (448)
.+++|.+|.++|||+++||++||+|++|||+++.+ .+++++.+.++. .++++++++.|++..
T Consensus 24 ~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~---~~~~~~~~~l~~-~~~~v~l~v~R~~~~ 85 (91)
T 2f5y_A 24 SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEH---WKCVELAHEIRS-CPSEIILLVWRMVPQ 85 (91)
T ss_dssp SSCEEEEECTTSHHHHHTCCTTCEEEEETTEECTT---CCHHHHHHHHHT-CSSEEEEEEEECC--
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCeEEEEEEeCCCC
Confidence 35789999999999999999999999999999932 256888888875 456799999998754
No 63
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.84 E-value=2.2e-09 Score=89.73 Aligned_cols=62 Identities=27% Similarity=0.334 Sum_probs=53.7
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQ 277 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~ 277 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++. .++++++++.|+++.
T Consensus 44 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~---~~~~~~~~~l~~-~g~~v~l~v~R~~~~ 106 (108)
T 2jre_A 44 TGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQG---MAQSDVVEVLRN-AGNPVRLLLIRRLPL 106 (108)
T ss_dssp CCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTT---SCHHHHHHHHHH-HCSEEEEEEEECCCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCeEEEEEEeCCcC
Confidence 578999999999999999 99999999999999922 237888888876 678999999998864
No 64
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.84 E-value=4.7e-09 Score=84.92 Aligned_cols=62 Identities=27% Similarity=0.381 Sum_probs=51.0
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++||++||+|++|||+++.+ .+.+++.+.++..+++.+.+++.|+++
T Consensus 27 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~---~~~~~~~~~l~~~~~~~~~~~~~r~~~ 88 (91)
T 1g9o_A 27 LGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEK---ETHQQVVSRIRAALNAVRLLVVDPETD 88 (91)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTT---CCHHHHHHHHHTCSSEEEEEEECCCCS
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCC---CCHHHHHHHHHcCCCcEEEEEEcCCcc
Confidence 57899999999999999999999999999999932 347888888887666666666666654
No 65
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.84 E-value=5e-09 Score=86.73 Aligned_cols=59 Identities=31% Similarity=0.450 Sum_probs=51.3
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCC--HHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNV--VSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s--~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.|++|.+|.++|||+++| |++||+|++|||+++ .+ ++|+.+.++... .+++++|.|.++
T Consensus 39 ~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v-----~~~~~~~~~~~l~~~~-~~v~l~v~r~~~ 100 (103)
T 2fcf_A 39 RGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDL-----RDASHEQAVEAIRKAG-NPVVFMVQSIIS 100 (103)
T ss_dssp --EEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-----TTCCHHHHHHHHHTCC-SSEEEEEECCCC
T ss_pred CCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEEC-----CCCCHHHHHHHHHhCC-CcEEEEEEECCC
Confidence 478999999999999999 999999999999999 55 999999998764 489999998764
No 66
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.84 E-value=6e-09 Score=89.00 Aligned_cols=62 Identities=34% Similarity=0.407 Sum_probs=53.6
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQ 277 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~ 277 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++... .+++++|.|+++.
T Consensus 53 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~---~~~~~~~~~l~~~~-~~v~l~v~R~g~~ 115 (117)
T 2fne_A 53 LPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEG---VTHEEAVAILKRTK-GTVTLMVLSSDET 115 (117)
T ss_dssp EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT---CCHHHHHHHHHHCC-SSEEEEEEECSCE
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHcCC-CeEEEEEEeCCcc
Confidence 468999999999999999 99999999999999922 38899999888654 4699999998864
No 67
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.83 E-value=6.4e-09 Score=87.35 Aligned_cols=63 Identities=29% Similarity=0.413 Sum_probs=54.8
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcC-CCCcEEEEEEeCCEE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKS-PKRNVLLKVARGEQQ 277 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~-~g~~V~l~V~R~G~~ 277 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++.. ++++++++|.|+++.
T Consensus 39 ~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~---~~~~~~~~~l~~~~~g~~v~l~v~R~~~~ 103 (111)
T 2koj_A 39 APIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAG---KSQEEVVSLLRSTKMEGTVSLLVFRQEEA 103 (111)
T ss_dssp SCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTT---SCHHHHHHHHHHCCCSSEEEEEEEECCCC
T ss_pred cCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCC---CCHHHHHHHHHhCCCCCeEEEEEEeCCCC
Confidence 578999999999999999 99999999999999932 3468999888874 588999999998863
No 68
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.83 E-value=1.4e-08 Score=84.95 Aligned_cols=61 Identities=33% Similarity=0.396 Sum_probs=52.9
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .++++....++. .+++++++|.|+++
T Consensus 32 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~---~~~~~~~~~l~~-~~~~v~l~v~R~~~ 93 (106)
T 4amh_A 32 NSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEE---VTHEEAVTALKN-TSDFVYLKVAKPGS 93 (106)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSS---CCHHHHHHHHHS-CCSEEEEEEECCSS
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCC---CCHHHHHHHHhC-CCCeEEEEEEeCCC
Confidence 478999999999999999 99999999999999932 467888888875 46689999999874
No 69
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.83 E-value=3.5e-09 Score=90.92 Aligned_cols=61 Identities=25% Similarity=0.298 Sum_probs=54.5
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCC--HHHHHHHHHcCC-CCcEEEEEEeCCEE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNV--VSELVNAIKKSP-KRNVLLKVARGEQQ 277 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s--~~dl~~~L~~~~-g~~V~l~V~R~G~~ 277 (448)
..++|.+|.++|||+++| |++||+|++|||+++ .+ ++|+.+.++..+ +++++++|.|+++.
T Consensus 45 ~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v-----~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~ 109 (122)
T 1v5q_A 45 SPPLISYIEADSPAERCGVLQIGDRVMAINGIPT-----EDSTFEEANQLLRDSSITSKVTLEIEFDVAE 109 (122)
T ss_dssp SCCEEEEECTTSHHHHSCCCCTTCCEEEETTEES-----SSSCHHHHHHHHHHHTTTTCEEEEEEEECCC
T ss_pred CCcEEEEECCCChHHHcCCCCCCCEEEEECCEEC-----CCCCHHHHHHHHHhCCCCCeEEEEEEECCcc
Confidence 346899999999999999 999999999999999 55 999999998755 88999999998863
No 70
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.83 E-value=1.2e-09 Score=94.37 Aligned_cols=70 Identities=33% Similarity=0.393 Sum_probs=56.8
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEEEEEEEeecc
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQFEIGVTPDE 286 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~~~l~v~p~~ 286 (448)
.+++|.+|.++|||++|||++||+|++|||+++.+ .+.+++.+.++ .++++.++|.|+|+..++++++..
T Consensus 46 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~---~~~~~~~~~~~--~~~~v~l~v~R~g~~~~~~v~~~~ 115 (128)
T 1uf1_A 46 LGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLN---ILHDEAVRLLK--SSRHLILTVKDVGRLPHARTTVDE 115 (128)
T ss_dssp CCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSS---CCHHHHHHHHT--TCSEEEEEEECCSCCSSCSCCCCS
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCC---CCHHHHHHHHh--cCCeEEEEEEECCccccccccccc
Confidence 47899999999999999999999999999999922 22355555554 357899999999998877777754
No 71
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.83 E-value=4.9e-09 Score=83.43 Aligned_cols=58 Identities=28% Similarity=0.280 Sum_probs=49.6
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCH--HHHHHHHHcCCCCcEEEEEEeCC
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVV--SELVNAIKKSPKRNVLLKVARGE 275 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~--~dl~~~L~~~~g~~V~l~V~R~G 275 (448)
.+++|.+|.++|||+++||++||+|++|||+++ .++ +|+.+.++.. ++++++++.|+.
T Consensus 23 ~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v-----~~~~~~~~~~~l~~~-~~~v~l~v~R~~ 82 (83)
T 2kv8_A 23 APCVLSCVMRGSPADFVGLRAGDQILAVNEINV-----KKASHEDVVKLIGKC-SGVLHMVIAEGV 82 (83)
T ss_dssp SSCBCCBCCTTSTTTTTTCCTTCEEEEETTEEC-----SSCCHHHHHHHHTTC-SSCEEEEEECCC
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEEC-----CCCCHHHHHHHHHhC-CCeEEEEEEcCC
Confidence 357899999999999999999999999999999 555 8888877643 567999999863
No 72
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.82 E-value=2.5e-09 Score=90.58 Aligned_cols=68 Identities=28% Similarity=0.367 Sum_probs=57.0
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEEEEEEEe
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQFEIGVT 283 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~~~l~v~ 283 (448)
.|++|.+|.++|||+++||++||+|++|||+++.+ .+++++.+.++.. ++++++++.|+++..+++++
T Consensus 38 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~---~~~~~~~~~l~~~-g~~v~l~v~R~~~~~~~~~~ 105 (114)
T 2edz_A 38 DGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDK---EEHAQVVELVRKS-GNSVTLLVLDGDSYEKAVKN 105 (114)
T ss_dssp CSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSS---SCHHHHHHHHHHT-CSEEEEEEECHHHHHHHHHH
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCC---CCHHHHHHHHHcC-CCEEEEEEEECCcceehhhc
Confidence 57899999999999999999999999999999932 3468998888764 88999999998875554443
No 73
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.82 E-value=5.1e-09 Score=84.28 Aligned_cols=60 Identities=27% Similarity=0.336 Sum_probs=48.0
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHc-CCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKK-SPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~-~~g~~V~l~V~R~G~ 276 (448)
.+++|..+ ++|||+ +||++||+|++|||+++.+ .+++|+.+.++. .+++++++++.|+|+
T Consensus 27 ~~~~v~~v-~~spA~-aGl~~GD~I~~vng~~v~~---~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 87 (88)
T 3bpu_A 27 GGQRVKQI-VDSPRS-RGLKEGDLIVEVNKKNVQA---LTHNQVVDMLVESPKGSEVTLLVQRQTR 87 (88)
T ss_dssp SSEEEEEC-CC--CC-TTCCTTCEEEEETTEECTT---SCHHHHHHHHHTSCTTCEEEEEEEEECC
T ss_pred CcEEEEEe-cCChhH-hCCCCCCEEEEECCEEcCC---CCHHHHHHHHHhCCCCCEEEEEEEeCCc
Confidence 46777777 999999 9999999999999999922 234899988885 568899999999875
No 74
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.82 E-value=7e-09 Score=84.67 Aligned_cols=61 Identities=26% Similarity=0.422 Sum_probs=51.9
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.|++|.+|.++|||+++| |++||+|++|||+++.+ .++.+....++. .++++++++.|+++
T Consensus 29 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~---~~~~~~~~~~~~-~g~~v~l~v~R~~~ 90 (95)
T 2vwr_A 29 PGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKY---GTPELAAQIIQA-SGERVNLTIARPGK 90 (95)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT---CCHHHHHHHHHH-CCSEEEEEEEEESC
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCEEEEEEEcCCc
Confidence 578999999999999999 99999999999999932 346777777764 47899999999775
No 75
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.81 E-value=5.2e-09 Score=87.91 Aligned_cols=63 Identities=24% Similarity=0.392 Sum_probs=53.9
Q ss_pred CCceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcC--CCCcEEEEEEeCCE
Q 040736 211 FPGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKS--PKRNVLLKVARGEQ 276 (448)
Q Consensus 211 ~~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~--~g~~V~l~V~R~G~ 276 (448)
..+++|.+|.++|||+++| |++||+|++|||+++.+ .+++|+.+.++.. ++.+++++|.|+++
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~---~~~~~~~~~l~~~~~~~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 32 DGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFEN---MSNDDAVRVLRDIVHKPGPIVLTVAKSGG 97 (108)
T ss_dssp CCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTS---CCHHHHHHHHHHHHTSSSCEEEEEECCCC
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHhcccCCCeEEEEEEeCCC
Confidence 3578999999999999999 99999999999999922 3499999999875 45579999999765
No 76
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.81 E-value=5.8e-10 Score=96.19 Aligned_cols=69 Identities=32% Similarity=0.420 Sum_probs=60.4
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCC--HHHHHHHHHcCCCCcEEEEEEeCCEEEE--EEEeec
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNV--VSELVNAIKKSPKRNVLLKVARGEQQFE--IGVTPD 285 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s--~~dl~~~L~~~~g~~V~l~V~R~G~~~~--l~v~p~ 285 (448)
.+++|.+|.++|||+++||++||+|++|||+++ .+ ++|+.+.++..+++.+.+++.|+|+..+ +++++.
T Consensus 33 ~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v-----~~~~~~~~~~~l~~~~~~~~~l~v~R~g~~~~~~~~l~~~ 105 (128)
T 2kjd_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCM-----EGKQHGDVVSAIRAGGDETKLLVVDRETDEFFKKCRVIPS 105 (128)
T ss_dssp CSEEEEEECTTSHHHHHTCCTTCEEEEETTEEC-----TTCCHHHHHHHHHTTCSEEEEEEECHHHHHHHHHHTCCCC
T ss_pred CCEEEEEeCCCChHHHcCCCCCCEEEEECCEEC-----CCCCHHHHHHHHHhCCCCEEEEEEEeCCcceEEEEEEEec
Confidence 478999999999999999999999999999999 55 9999999988778888999999987665 555553
No 77
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.81 E-value=6.4e-09 Score=86.58 Aligned_cols=60 Identities=30% Similarity=0.395 Sum_probs=52.2
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++||++||+|++|||+++.+ .+++++.+.++. +++++++|+|+..
T Consensus 41 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~---~~~~~~~~~l~~--~~~v~l~v~r~~~ 100 (104)
T 1wi2_A 41 LGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQD---IEHSKAVEILKT--AREISMRVRFFSG 100 (104)
T ss_dssp CCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSS---CCHHHHHHHHHH--SSSEEEEEECCCC
T ss_pred CCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCC---CCHHHHHHHHhC--CCEEEEEEEECCC
Confidence 47899999999999999999999999999999921 239999999986 6889999998753
No 78
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.81 E-value=1.8e-09 Score=91.09 Aligned_cols=70 Identities=23% Similarity=0.298 Sum_probs=58.8
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEEEEEEEeec
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQFEIGVTPD 285 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~~~l~v~p~ 285 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .++.+....++.. ++++++++.|+++..+++++|.
T Consensus 35 ~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~---~~~~~~~~~~~~~-g~~v~l~v~R~~~~~~~~v~p~ 105 (113)
T 2g5m_B 35 LGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVG---VTQSFAASVLRNT-KGRVRFMIGRERPGEQSEVAQL 105 (113)
T ss_dssp EEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSS---CCHHHHHHHHHHS-CSSCEEEEEECCCCTTSSCSSC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHhcC-CCeEEEEEEeCCCCCcchhhhh
Confidence 578999999999999999 99999999999999932 3577887877764 7889999999998766665554
No 79
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.80 E-value=1e-08 Score=86.65 Aligned_cols=62 Identities=31% Similarity=0.363 Sum_probs=53.0
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQ 277 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~ 277 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++. .+++++++|.|+++.
T Consensus 49 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~---~~~~~~~~~l~~-~g~~v~l~v~R~~~~ 111 (112)
T 2r4h_A 49 MDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKN---MKHSRAIELIKN-GGRRVRLFLKRGETS 111 (112)
T ss_dssp CCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTT---CCHHHHHHHHHT-TTTEEEEEEECCEEE
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCeEEEEEEeCCcc
Confidence 578999999999999999 99999999999999932 356788777775 678899999998763
No 80
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.80 E-value=7.5e-09 Score=85.60 Aligned_cols=60 Identities=28% Similarity=0.323 Sum_probs=50.8
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCC
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGE 275 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G 275 (448)
.+++|.+|.++|||++|||++||+|++|||+++.+ .+++|+.+.++... ++++++|.|++
T Consensus 36 ~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~---~~~~~~~~~l~~~~-~~v~l~v~R~~ 95 (100)
T 1whd_A 36 SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEH---WKCVELAHEIRSCP-SEIILLVWRVS 95 (100)
T ss_dssp SSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTT---CCHHHHHHHHHHCS-SEEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCC---CCHHHHHHHHHcCC-CeEEEEEEECC
Confidence 45789999999999999999999999999999921 25789988887654 45999999975
No 81
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.80 E-value=7.8e-09 Score=85.50 Aligned_cols=63 Identities=32% Similarity=0.378 Sum_probs=54.3
Q ss_pred CCceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEE
Q 040736 211 FPGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQ 277 (448)
Q Consensus 211 ~~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~ 277 (448)
..+++|.+|.++|||+++| |++||+|++|||+++.+ .++.++.+.++. .++++++++.|+++.
T Consensus 33 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~---~~~~~~~~~~~~-~g~~v~l~v~R~~~~ 96 (102)
T 2i1n_A 33 DPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSE---VVHSRAVEALKE-AGPVVRLVVRRRQPP 96 (102)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSS---CCHHHHHHHHHH-SCSEEEEEEEEECCC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCeEEEEEEeCCCC
Confidence 3578999999999999999 99999999999999932 347888888876 578999999998764
No 82
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.80 E-value=7.6e-09 Score=84.25 Aligned_cols=59 Identities=25% Similarity=0.392 Sum_probs=48.9
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCH--HHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVV--SELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~--~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||++|||++||+|++|||+++ .++ +++.+.++. .+.++.+++.|.+.
T Consensus 29 ~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v-----~~~~~~~~~~~l~~-~~~~~~~~~~r~~~ 89 (95)
T 3r68_A 29 KGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSV-----EALDHDGVVEMIRK-GGDQTTLLVLDKEL 89 (95)
T ss_dssp CSEEEECCCTTSHHHHHTCCTTEEEEEETTEEC-----TTCCHHHHHHHHHT-TTTEEEEEEEECC-
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEEC-----CCCCHHHHHHHHHh-CCCeEEEEEECCcc
Confidence 378999999999999999999999999999999 555 899999987 44566666666543
No 83
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.80 E-value=1e-08 Score=84.04 Aligned_cols=59 Identities=36% Similarity=0.374 Sum_probs=50.4
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeC
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARG 274 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~ 274 (448)
.+++|.+|.++|||+++||++||+|++|||+++.+ .+++|+.+.++.. +++++++|.|+
T Consensus 37 ~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~---~~~~~~~~~l~~~-~~~v~l~v~~~ 95 (96)
T 2ego_A 37 MVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEG---IRHREIVDIIKAS-GNVLRLETLYG 95 (96)
T ss_dssp EEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTT---CCHHHHHHHHHHT-TTEEEEEEECC
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEECCC---CCHHHHHHHHHhC-CCeEEEEEEEC
Confidence 46789999999999999999999999999999921 2379999999876 45899988875
No 84
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.80 E-value=1.1e-08 Score=106.82 Aligned_cols=70 Identities=23% Similarity=0.360 Sum_probs=64.8
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHc-CCCCcEEEEEEeCCEEEEEEEeecc
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKK-SPKRNVLLKVARGEQQFEIGVTPDE 286 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~-~~g~~V~l~V~R~G~~~~l~v~p~~ 286 (448)
.|++|.+|.++|||++|||++||+|++|||+++ .+++|+...+.. .+|++++++|.|+|+..++++++..
T Consensus 282 ~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v-----~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~~~v~l~~ 352 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAGLKAGDIITQINDTKI-----TQATQVKTTISLLRVGSTVKIIVERDNKPLTLSAVVTD 352 (451)
T ss_dssp CCEEEEEECTTSHHHHHTCCTTCEEEEETTEEC-----CSHHHHHHHHHTSCTTCEEEEEEEETTEEEEEEEECBC
T ss_pred ceEEEEecCCCChHHHcCCCCCCEEEEECCEEc-----CCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEcc
Confidence 689999999999999999999999999999999 899999999986 6789999999999999998888753
No 85
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.80 E-value=1.1e-08 Score=87.85 Aligned_cols=62 Identities=26% Similarity=0.317 Sum_probs=54.7
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCC-CCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSP-KRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~-g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++|+.+.++..+ +++++++|.|++.
T Consensus 44 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~---~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 107 (123)
T 1ueq_A 44 EFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLG---HTHADVVKLFQSVPIGQSVNLVLCRGYP 107 (123)
T ss_dssp CCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTT---SCHHHHHHHHHTSCTTCEEEEEEEESCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCC---CCHHHHHHHHHhCCCCCeEEEEEEeCCC
Confidence 468999999999999999 99999999999999922 37899999998764 8899999999874
No 86
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.80 E-value=6.7e-09 Score=85.98 Aligned_cols=61 Identities=25% Similarity=0.324 Sum_probs=52.3
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++||++||+|++|||+++.+ .+++++.+.++. .++++++++.|+++
T Consensus 30 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~---~~~~~~~~~l~~-~g~~v~l~v~r~~~ 90 (102)
T 2d90_A 30 KGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEA---LDHDGVVEMIRK-GGDQTTLLVLDKEA 90 (102)
T ss_dssp SSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTT---SCHHHHHHHHHH-STTEEEEEECSTTC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCEEEEEEEECCC
Confidence 57899999999999999999999999999999932 236888888876 47889999988664
No 87
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.80 E-value=9.5e-09 Score=83.50 Aligned_cols=61 Identities=30% Similarity=0.402 Sum_probs=51.1
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++.. ++++++++.|+++
T Consensus 33 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~---~~~~~~~~~~~~~-~~~v~l~v~R~g~ 94 (94)
T 2fe5_A 33 NSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQD---VRHEEAVASLKNT-SDMVYLKVAKPGS 94 (94)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT---CBHHHHHHHHHTC-CSEEEEEEECCCC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHcC-CCeEEEEEEcCCC
Confidence 478999999999999999 99999999999999932 3467887777654 4589999999763
No 88
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.79 E-value=3.5e-09 Score=88.01 Aligned_cols=62 Identities=27% Similarity=0.431 Sum_probs=53.7
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCC-CCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSP-KRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~-g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++|+.+.++..+ +++++++|.|+++
T Consensus 34 ~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~---~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 97 (103)
T 1uep_A 34 QPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAG---KTHRYVIDLMHHAARNGQVNLTVRRKVL 97 (103)
T ss_dssp SCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTT---SCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCC---CCHHHHHHHHHhCCCCCcEEEEEEeCCC
Confidence 467899999999999999 99999999999999932 35889999888654 7899999999764
No 89
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.79 E-value=6.1e-09 Score=90.46 Aligned_cols=60 Identities=27% Similarity=0.426 Sum_probs=53.8
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHc-CCCCcEEEEEEeC
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKK-SPKRNVLLKVARG 274 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~-~~g~~V~l~V~R~ 274 (448)
.+++|.+|.++|||++|| |++||+|++|||+++.. .+++|+.+.++. .+|++++++|.|+
T Consensus 49 ~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~---~s~~d~~~~l~~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 49 PYLQISHLINKGAAASDGILQPGDVLISVGHANVLG---YTLREFLKLLQNITIGTVLQIKAYRG 110 (126)
T ss_dssp TEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTT---CCHHHHHHHHTSCCSSCEEEEEEESS
T ss_pred CcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCC---CCHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 467899999999999999 99999999999999921 489999999987 4689999999997
No 90
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.79 E-value=6e-09 Score=86.32 Aligned_cols=59 Identities=31% Similarity=0.427 Sum_probs=50.4
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeC
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARG 274 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~ 274 (448)
.+++|.+|.++|||++|| |++||+|++|||+++.+ .+++|+.+.++.. +++++++|.+.
T Consensus 36 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~---~~~~~~~~~l~~~-~~~v~L~V~~~ 95 (97)
T 2ejy_A 36 QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTN---HSVDQLQKAMKET-KGMISLKVIPN 95 (97)
T ss_dssp CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCS---SCSHHHHHHHHHC-CEEEEEEEECC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHcC-CCeEEEEEEEC
Confidence 478999999999999999 99999999999999921 2599999999865 56788888764
No 91
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.78 E-value=1e-08 Score=85.34 Aligned_cols=61 Identities=26% Similarity=0.407 Sum_probs=52.7
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++.. +++++++|.|+++
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~---~~~~~~~~~l~~~-g~~v~l~v~R~~~ 99 (105)
T 1wha_A 38 AGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTE---ARHDHAVSLLTAA-SPTIALLLEREAG 99 (105)
T ss_dssp CSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTT---CCHHHHHHHHTSC-CSCEEEEEEECCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHcC-CCeEEEEEEECCC
Confidence 578999999999999999 99999999999999932 3488998888754 7889999999753
No 92
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.78 E-value=6.3e-09 Score=86.35 Aligned_cols=61 Identities=23% Similarity=0.251 Sum_probs=52.4
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++. .+++++++|.|+++
T Consensus 38 ~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~---~~~~~~~~~~~~-~g~~v~l~v~R~g~ 99 (104)
T 2djt_A 38 TPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQG---LTHAQAVERIRA-GGPQLHLVIRRPLS 99 (104)
T ss_dssp CCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTT---CCHHHHHHHHHH-TCSEEEEEECCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCeEEEEEEECCC
Confidence 467899999999999999 99999999999999932 236788877776 67899999999875
No 93
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.78 E-value=2e-08 Score=93.09 Aligned_cols=100 Identities=19% Similarity=0.250 Sum_probs=67.2
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEEE--EEEEeecccC
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQF--EIGVTPDENY 288 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~~--~l~v~p~~~~ 288 (448)
.|++|.+|.++|||+++| |++||+|++|||+++.+|. .++.++...++...+.+++++|.|+++.. ++++....
T Consensus 45 ~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~-~~~~~~~~~~~~~~~~~v~l~v~R~~~~~~~~~~v~l~~-- 121 (206)
T 3r0h_A 45 TGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGS-MTTLKVHQLFHTTYEKAVTLTVFRADPPELEKFNVDLMK-- 121 (206)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGG-SCHHHHHHHHHSCCSSEEEEEEECCSSCCEEEEEEEEEC--
T ss_pred CCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCc-cCHHHHHHHHHhcCCCceEEEEEecccCCCcEEEEEEec--
Confidence 578999999999999998 9999999999999992100 23777777777655555999999987543 33333321
Q ss_pred CCCceEEEEecC---CcceeeeecCCHHH
Q 040736 289 DGTGKIGVQLSP---NVKISKVLPKNLLE 314 (448)
Q Consensus 289 ~~~~~lGV~~~~---~~~~~~~~~~~~~~ 314 (448)
.....+|+.+.. ...+..+.+.++.+
T Consensus 122 ~~~~~lG~~~~~~~~gv~V~~V~~gs~A~ 150 (206)
T 3r0h_A 122 KAGKELGLSLSPNEIGCTIADLIQGQYPE 150 (206)
T ss_dssp CTTCCCCEEEEECSSCEEEEEECTTSCHH
T ss_pred CCCCccCeEEEcCCceEEEEEECCCChHH
Confidence 122346766532 23344555555543
No 94
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.77 E-value=1.7e-08 Score=104.99 Aligned_cols=70 Identities=34% Similarity=0.507 Sum_probs=64.3
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHc-CCCCcEEEEEEeCCEEEEEEEeecc
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKK-SPKRNVLLKVARGEQQFEIGVTPDE 286 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~-~~g~~V~l~V~R~G~~~~l~v~p~~ 286 (448)
.|++|.+|.++|||++|||++||+|++|||+++ .+++|+...+.. .+|++++++|.|+|+..++++++..
T Consensus 263 ~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v-----~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~ 333 (436)
T 4a8c_A 263 RGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPL-----NSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDT 333 (436)
T ss_pred cceEEEEECCCChHHHCCCCCCCEEEEECCEEC-----CCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEECC
Confidence 689999999999999999999999999999999 899999988875 5689999999999999999888764
No 95
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.77 E-value=1.2e-08 Score=84.11 Aligned_cols=61 Identities=31% Similarity=0.475 Sum_probs=51.9
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++. .+++++++|.|+++
T Consensus 37 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~---~~~~~~~~~~~~-~g~~v~l~v~R~~~ 98 (101)
T 2jik_A 37 SGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKN---LLHQDAVDLFRN-AGYAVSLRVQHRLE 98 (101)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSS---CCHHHHHHHHHT-CCSEEEEEEEEESC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCC---CCHHHHHHHHHh-CCCeEEEEEEeCCC
Confidence 578999999999999999 99999999999999932 346788877775 47789999999775
No 96
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.77 E-value=1e-08 Score=87.53 Aligned_cols=61 Identities=30% Similarity=0.378 Sum_probs=53.5
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++.. +++++++|.|+++
T Consensus 54 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~---~~~~~~~~~l~~~-g~~v~l~v~R~~~ 115 (117)
T 2byg_A 54 NSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEE---VTHEEAVAILKNT-SEVVYLKVGKPTT 115 (117)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT---CCHHHHHHHHHTC-CSEEEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHcC-CCeEEEEEEeCCc
Confidence 478999999999999999 99999999999999932 3788998888854 7889999999765
No 97
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.77 E-value=2.5e-08 Score=92.13 Aligned_cols=62 Identities=24% Similarity=0.299 Sum_probs=54.8
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCC-CCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSP-KRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~-g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||++|| |++||+|++|||+++.+ .+++|+.+.++..+ ++++++++.|+++
T Consensus 36 ~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~---~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 99 (196)
T 1p1d_A 36 SPPLISYIEADSPAERCGVLQIGDRVMAINGIPTED---STFEEANQLLRDSSITSKVTLEIEFDVA 99 (196)
T ss_dssp CSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTT---SCHHHHHHHHHTCCSSSEEEEEEEECSC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHhCCCCCeEEEEEEecCC
Confidence 467899999999999999 99999999999999921 27899999998765 8899999999984
No 98
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.77 E-value=1e-08 Score=84.79 Aligned_cols=59 Identities=22% Similarity=0.233 Sum_probs=50.7
Q ss_pred CceeecccCCCChhhhC-CCCCCCEEEEECCeecCCCCCCC-HHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRD-GLFPGDVILSVNGNEFPKTGPNV-VSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~A-GL~~GDvIlsInG~~V~~~~~~s-~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||++| ||++||+|++|||+++ .+ .+++.+.++. .+++++++|.|+++
T Consensus 35 ~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v-----~~~~~~~~~~~~~-~~~~v~l~v~R~~~ 95 (100)
T 2edp_A 35 EPLTVSKIEDGGKAALSQKMRTGDELVNINGTPL-----YGSRQEALILIKG-SFRILKLIVRRRNS 95 (100)
T ss_dssp EEEEECCCCTTSHHHHHTSCCTTCEEEEETTEEC-----CSCSHHHHHHHHT-CCSSCEEEEEECCC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEc-----cchHHHHHHHHHh-CCCeEEEEEEeCCC
Confidence 35789999999999999 9999999999999999 44 4677777775 36889999999875
No 99
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.76 E-value=8.5e-09 Score=84.08 Aligned_cols=60 Identities=33% Similarity=0.363 Sum_probs=48.8
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++||++||+|++|||+++.+ .+..++.+.++ ++++++++|.|+++
T Consensus 29 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~---~~~~~~~~~~~--~g~~v~l~v~R~~~ 88 (93)
T 2dls_A 29 RIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTN---SSHLEVVKLIK--SGAYVALTLLGSSS 88 (93)
T ss_dssp SSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSS---SCHHHHHHHHT--SSSEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCC---CCHHHHHHhhc--CCCEEEEEEEECCC
Confidence 46889999999999999999999999999999932 22345555554 58899999999764
No 100
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.76 E-value=6.9e-09 Score=88.36 Aligned_cols=62 Identities=18% Similarity=0.234 Sum_probs=53.8
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQ 277 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~ 277 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++. .+++++++|+|+++.
T Consensus 49 ~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~---~~~~~~~~~l~~-~~~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 49 IGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTS---KTYEEVQSIISQ-QSGEAEICVRLDLNM 111 (117)
T ss_dssp EEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTT---CCHHHHHHHHSC-CSSCEEEEEESSCCC
T ss_pred cCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCC---CCHHHHHHHHhc-CCCEEEEEEEECCcc
Confidence 368999999999999999 99999999999999932 457888888876 678899999998763
No 101
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.76 E-value=1.4e-08 Score=88.43 Aligned_cols=62 Identities=32% Similarity=0.403 Sum_probs=54.5
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcC-CCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKS-PKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~-~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++|+.+.++.. ++++++++|.|++.
T Consensus 65 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~---~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 128 (131)
T 1wfg_A 65 LCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQG---ATFEEVYNIILESKPEPQVELVVSRSGP 128 (131)
T ss_dssp EEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTT---CCHHHHHHHHHHTSSSSEEEEEEEEECS
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHhcCCCCEEEEEEEcCCC
Confidence 478999999999999999 99999999999999932 4679999999875 67899999999763
No 102
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.76 E-value=3.5e-09 Score=89.99 Aligned_cols=64 Identities=20% Similarity=0.262 Sum_probs=53.3
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHH-cCCCCcEEEEEEeCCEEEEE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIK-KSPKRNVLLKVARGEQQFEI 280 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~-~~~g~~V~l~V~R~G~~~~l 280 (448)
.|++|.+|.++|||+++||++||+|++|||+++ .+++++...+. ..++++++++|.|+++..+.
T Consensus 42 ~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v-----~~~~~~~~~~~~~~~g~~v~l~v~r~~~~~~~ 106 (117)
T 1uit_A 42 GGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINL-----RSATEQQARLIIGQQCDTITILAQYNPHVHQL 106 (117)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEECEETTEET-----TTCCHHHHHHHTTSCCSEEEEEECCCSCCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEEC-----CCCCHHHHHHHHHcCCCeEEEEEEECCchhhh
Confidence 478999999999999999999999999999999 66666555443 35688999999998876543
No 103
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.76 E-value=1.3e-08 Score=87.72 Aligned_cols=61 Identities=30% Similarity=0.440 Sum_probs=52.5
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.|++|.+|.++|||++|| |++||+|++|||+++.+ .+++|+.+.++... ++++++|.|...
T Consensus 59 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~---~~~~~~~~~l~~~~-~~v~l~v~r~~~ 120 (123)
T 2iwq_A 59 RGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRD---ASHEQAVEAIRKAG-NPVVFMVQSIIS 120 (123)
T ss_dssp CSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTT---CCHHHHHHHHHHCC-SSEEEEEECCCC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHcCC-CeEEEEEEECCc
Confidence 578999999999999999 99999999999999921 33899999998764 489999998653
No 104
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.76 E-value=6.7e-09 Score=87.89 Aligned_cols=62 Identities=21% Similarity=0.346 Sum_probs=53.5
Q ss_pred CceeecccCCCChhhhCCC-CCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEE
Q 040736 212 PGVLVPEVRALSAASRDGL-FPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQ 277 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL-~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~ 277 (448)
.+++|.+|.++|||+++|+ ++||+|++|||+++.+ .+++|+.+.++... ++++++|.|+++.
T Consensus 48 ~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~---~~~~~~~~~l~~~~-~~v~l~v~r~~~~ 110 (113)
T 1va8_A 48 DSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRG---KDVNEVFDLLSDMH-GTLTFVLIPSSGP 110 (113)
T ss_dssp SSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTT---CCHHHHHHHHHHCC-EEEEEEEECCCCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHcCC-CeEEEEEEECCcc
Confidence 5789999999999999999 9999999999999922 37889999987654 5799999998763
No 105
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.75 E-value=7.2e-09 Score=87.81 Aligned_cols=56 Identities=30% Similarity=0.338 Sum_probs=50.9
Q ss_pred ceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCC--CHHHHHHHHHcCCCCcEEEEEEe
Q 040736 213 GVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPN--VVSELVNAIKKSPKRNVLLKVAR 273 (448)
Q Consensus 213 gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~--s~~dl~~~L~~~~g~~V~l~V~R 273 (448)
+++|.+|.++|||++|||++||+|++|||+++ . +++|+.+.++...+++++++|.|
T Consensus 37 ~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v-----~~~~~~d~~~~i~~~~~~~v~l~V~~ 94 (111)
T 1vae_A 37 PVQVHFLDPHCSASLAGAKEGDYIVSIQGVDC-----KWLTVSEVMKLLKSFGGEEVEMKVVS 94 (111)
T ss_dssp SCEECCCCTTSSHHHHHCCTTCEEEEETTEEC-----SSCCHHHHHHHHHHTTTSEECEEEEC
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEEC-----CCCCHHHHHHHHHhCCCceEEEEEEe
Confidence 46899999999999999999999999999999 6 89999999987777778888876
No 106
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.75 E-value=1.5e-08 Score=82.47 Aligned_cols=61 Identities=26% Similarity=0.471 Sum_probs=52.1
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+..++.+.++. .++++++++.|+|+
T Consensus 33 ~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~---~~~~~~~~~~~~-~~~~v~l~v~r~g~ 94 (97)
T 2iwn_A 33 SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQG---FTNQQAVEVLRH-TGQTVLLTLMRRGE 94 (97)
T ss_dssp CCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTT---SCHHHHHHHHHT-CCSEEEEEEEEEEE
T ss_pred CCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCeEEEEEEeCCC
Confidence 578899999999999999 99999999999999932 246777777775 78899999999774
No 107
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.75 E-value=8.5e-09 Score=89.09 Aligned_cols=63 Identities=24% Similarity=0.329 Sum_probs=55.4
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEEE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQF 278 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~~ 278 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++|+.+.++. .++++.++|.|+++..
T Consensus 46 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~---~~~~~~~~~l~~-~~~~v~l~v~R~~~~~ 109 (129)
T 2dmz_A 46 SGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQG---FANHDVVEVLRN-AGQVVHLTLVRRKTSS 109 (129)
T ss_dssp CEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTT---CCHHHHHHHHHH-CCSSEEEEEEEESSSS
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCeEEEEEEeCCccc
Confidence 578999999999999999 99999999999999921 238999999987 7889999999988643
No 108
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.75 E-value=1.5e-08 Score=85.83 Aligned_cols=62 Identities=37% Similarity=0.604 Sum_probs=53.0
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQ 277 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~ 277 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++... ++++++|.|+++.
T Consensus 43 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~---~~~~~~~~~l~~~~-~~v~l~v~R~~~~ 105 (116)
T 2dm8_A 43 NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRN---SSHEEAITALRQTP-QKVRLVVYRDEAH 105 (116)
T ss_dssp SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSS---SCHHHHHHHHHTCC-SEEEEEEECCSSC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCC---CCHHHHHHHHHhCC-CeEEEEEEeCCcc
Confidence 478999999999999999 99999999999999932 23788888887544 7899999998864
No 109
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.75 E-value=1.4e-08 Score=84.56 Aligned_cols=63 Identities=29% Similarity=0.319 Sum_probs=54.1
Q ss_pred CCceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEE
Q 040736 211 FPGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQ 277 (448)
Q Consensus 211 ~~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~ 277 (448)
..+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++...++. .++++++++.|+++.
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~---~~~~~~~~~~~~-~g~~v~l~v~R~~~~ 100 (106)
T 3axa_A 37 KLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVG---LSQERAAELMTR-TSSVVTLEVAKQGAI 100 (106)
T ss_dssp SEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTT---CCHHHHHHHHHT-CCSEEEEEEECCCSS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCeEEEEEEeCCcc
Confidence 3578999999999999999 99999999999999932 468888887765 678999999998753
No 110
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.75 E-value=2.3e-08 Score=103.97 Aligned_cols=70 Identities=26% Similarity=0.440 Sum_probs=63.9
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEEEEEEEeeccc
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQFEIGVTPDEN 287 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~~~l~v~p~~~ 287 (448)
.|++|.+|.++|||+++||++||+|++|||+++ .+++|+.+.++.+++ ++.++|+|+|+.+++++++...
T Consensus 363 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v-----~~~~~~~~~l~~~~~-~v~l~v~R~g~~~~~~~~~~~~ 432 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRV-----NSIAEMRKVLAAKPA-IIALQIVRGNESIYLLMRLEHH 432 (436)
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCEEEEECCEEC-----CCHHHHHHHHHhCCC-eEEEEEEECCEEEEEEEEeccc
Confidence 478999999999999999999999999999999 899999999987544 8999999999999999888754
No 111
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.75 E-value=1.4e-08 Score=109.49 Aligned_cols=70 Identities=20% Similarity=0.275 Sum_probs=61.7
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHc-CCCCcEEEEEEeCCEEEEEEEeeccc
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKK-SPKRNVLLKVARGEQQFEIGVTPDEN 287 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~-~~g~~V~l~V~R~G~~~~l~v~p~~~ 287 (448)
.|++|.+|.++|||++|||++||+|++|||++| + .+++.+.++. ++|++++++|.|+|+.+++++++...
T Consensus 496 ~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v-----~-~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~~ 566 (597)
T 4fgm_A 496 QGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQA-----T-EQSVKRILERYIPGDTVTIHAFRRDELMTLELTWQEP 566 (597)
T ss_dssp TEEEEEEECTTSHHHHHTCCTTCEEEEETTEEC-----C-TTTHHHHHTTCCTTCEEEEEEEETTEEEEEEEECCCC
T ss_pred CeEEEEEeCCCChHHHCCCCCCCEEEEECCEEC-----C-HHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEecCC
Confidence 367899999999999999999999999999999 3 5677777775 57899999999999999999988654
No 112
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.75 E-value=3.3e-09 Score=90.41 Aligned_cols=65 Identities=18% Similarity=0.255 Sum_probs=56.4
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEEEE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQFE 279 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~~~ 279 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++..+++.+.+++.|+++..+
T Consensus 42 ~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~---~~~~~~~~~l~~~~~~~~~l~v~R~~~~~~ 107 (119)
T 1x6d_A 42 KVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKG---TTHHDALAILRQAREPRQAVIVTRKLTPEA 107 (119)
T ss_dssp SSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSS---CCHHHHHHHHHHTTSSSEEEEEEECCCSSS
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHhCCCCeEEEEEEcCCCccc
Confidence 578999999999999999 99999999999999932 378999999988777888899999886543
No 113
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.75 E-value=1.4e-08 Score=84.62 Aligned_cols=61 Identities=31% Similarity=0.385 Sum_probs=52.3
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
++++|.+|.++|||+++||++||+|++|||+++.+ .+++++.+.++. .++++++++.|.+.
T Consensus 43 p~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~---~~~~~~~~~l~~-~g~~v~l~v~r~~~ 103 (107)
T 3qe1_A 43 PLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEG---ATHKQVVDLIRA-GEKELILTVLSVES 103 (107)
T ss_dssp CCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTT---CCHHHHHHHHHH-CSSEEEEEEECSSC
T ss_pred CceEEEEECCCCHHHHcCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCEEEEEEEcCCC
Confidence 44569999999999999999999999999999921 388999998885 57889999998654
No 114
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.75 E-value=2e-08 Score=81.15 Aligned_cols=59 Identities=25% Similarity=0.282 Sum_probs=48.0
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeC
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARG 274 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~ 274 (448)
.|++|.+|.++|||+++||++||+|++|||+++.+ .+..+....++ ..++++++++.|+
T Consensus 32 ~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~---~~~~~~~~~~~-~~g~~v~l~v~R~ 90 (91)
T 1m5z_A 32 KGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRD---FDCCLVVPLIA-ESGNKLDLVISRN 90 (91)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTT---CCHHHHHHHHH-TSTTEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCC---CCHHHHHHHHH-cCCCEEEEEEEeC
Confidence 57899999999999999999999999999999921 22345555565 3578899999886
No 115
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.74 E-value=1.7e-08 Score=81.73 Aligned_cols=61 Identities=31% Similarity=0.431 Sum_probs=51.1
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+.+++...++. .++++++++.|++.
T Consensus 29 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~---~~~~~~~~~~~~-~~~~v~l~v~R~~~ 90 (92)
T 2qg1_A 29 TGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRN---ATQEAVAALLKC-SLGTVTLEVGRIST 90 (92)
T ss_dssp CSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTT---CCHHHHHHHHHH-CCSEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCeEEEEEEcccc
Confidence 478999999999999999 99999999999999932 346777777765 46789999999763
No 116
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.74 E-value=2e-08 Score=84.13 Aligned_cols=57 Identities=28% Similarity=0.364 Sum_probs=50.0
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCH--HHHHHHHHcCCCCcEEEEEEeC
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVV--SELVNAIKKSPKRNVLLKVARG 274 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~--~dl~~~L~~~~g~~V~l~V~R~ 274 (448)
.|++|.+|.++|||+++||++||+|++|||+++ .++ +++.+.++.. ++++.+++.|.
T Consensus 45 ~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v-----~~~~~~~~~~~l~~~-~~~v~l~v~~~ 103 (109)
T 1q3o_A 45 ALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNV-----VKVGHRQVVNMIRQG-GNTLMVKVVMV 103 (109)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTEEC-----TTCCHHHHHHHHHHT-TTEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEEC-----CCCCHHHHHHHHHhC-CCEEEEEEEEC
Confidence 478999999999999999999999999999999 566 8888888764 67888888774
No 117
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.74 E-value=8e-09 Score=85.40 Aligned_cols=61 Identities=28% Similarity=0.356 Sum_probs=52.1
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++ ..++++++++.|+++
T Consensus 36 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~---~~~~~~~~~~~-~~g~~v~l~v~R~~~ 97 (103)
T 1wfv_A 36 MDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRD---MTHARAIELIK-SGGRRVRLLLKRGTG 97 (103)
T ss_dssp EEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSS---CCHHHHHHHHH-HHCSEECEEEECTTC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHH-cCCCeEEEEEEECCC
Confidence 378999999999999999 99999999999999932 34678877776 457889999999875
No 118
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.74 E-value=5.3e-09 Score=90.27 Aligned_cols=61 Identities=26% Similarity=0.385 Sum_probs=53.8
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++||++||+|++|||+++.+ .+++|+.+.++.. +++++++|.|+++
T Consensus 61 ~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~---~~~~~~~~~l~~~-g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 61 DTIFVKQVKEGGPAFEAGLCTGDRIIKVNGESVIG---KTYSQVIALIQNS-DTTLELSVMPKDS 121 (126)
T ss_dssp CCCCBCCCCSSSHHHHHTCCSSCCCCEETTEECSS---CCHHHHHHHHHTC-TTEEEEECCCCCC
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCC---CCHHHHHHHHHcC-CCEEEEEEEECCC
Confidence 56789999999999999999999999999999921 3899999999864 8899999999775
No 119
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.74 E-value=1.1e-08 Score=86.07 Aligned_cols=62 Identities=24% Similarity=0.309 Sum_probs=54.7
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCC---CCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSP---KRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~---g~~V~l~V~R~G~ 276 (448)
++++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++... ++++++++.|+++
T Consensus 41 ~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~---~~~~~~~~~l~~~~~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 41 PLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIG---VSFEEAKSIITRAKLRSESPWEIAFIRSGP 106 (109)
T ss_dssp SSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTT---CCHHHHHHHHHHSCCSSSSCEEEEEECCCC
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCC---CCHHHHHHHHHccccCCCceEEEEEEeCCC
Confidence 468999999999999999 99999999999999932 45999999998866 8889999999764
No 120
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.73 E-value=1e-08 Score=86.73 Aligned_cols=61 Identities=28% Similarity=0.298 Sum_probs=53.1
Q ss_pred ceeecccCCCChhhh-CCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEE
Q 040736 213 GVLVPEVRALSAASR-DGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQ 277 (448)
Q Consensus 213 gvvV~~V~~gSpA~~-AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~ 277 (448)
+++|.+|.++|||++ +||++||+|++|||+++.+ .+++|+.+.++. .++++.++|.|+++.
T Consensus 44 ~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~---~~~~~~~~~l~~-~g~~v~l~v~r~~~~ 105 (114)
T 1uew_A 44 PHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIIN---MPHADIVKLIKD-AGLSVTLRIIPQEEL 105 (114)
T ss_dssp SCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTT---SCHHHHHHHHHH-TTTEEEEEECCCSCC
T ss_pred CeEEEEECCCChHHHhCCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCeEEEEEEeCCcC
Confidence 458999999999999 9999999999999999921 237999999987 788999999998763
No 121
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.73 E-value=5.6e-09 Score=86.32 Aligned_cols=59 Identities=31% Similarity=0.420 Sum_probs=48.5
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHc-CCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKK-SPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~-~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++||++||+|++|||+++ .++++. +.+.. +.+++++++|.|+++
T Consensus 35 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v-----~~~~~~-~~~~~~~~~~~v~l~v~R~g~ 94 (101)
T 1uez_A 35 VGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSL-----ARVTHA-EAVKALKGSKKLVLSVYSAGR 94 (101)
T ss_dssp CCEEEEEECTTSHHHHHTCCSSCCEEEETTEEC-----SSCCHH-HHHHHSSSSSSCCEEECCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEEC-----CCcCHH-HHHHhhcCCCeEEEEEEECCc
Confidence 478999999999999999999999999999999 566552 33332 456789999999875
No 122
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.73 E-value=8.9e-09 Score=83.09 Aligned_cols=61 Identities=25% Similarity=0.377 Sum_probs=51.6
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCC-CCcEEEEEEeCC
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSP-KRNVLLKVARGE 275 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~-g~~V~l~V~R~G 275 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++..+ +++++++|.|.+
T Consensus 27 ~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~---~~~~~~~~~l~~~~~~~~v~l~v~R~~ 89 (90)
T 2q9v_A 27 EPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIG---KSHQLVVQLMQQAAKQGHVNLTVRQTR 89 (90)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT---SCHHHHHHHHHHHHHHTEEEEEEEECC
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCC---CCHHHHHHHHHhCCCCCeEEEEEEecc
Confidence 347899999999999999 99999999999999943 56888888887644 458999998864
No 123
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.72 E-value=5.6e-09 Score=89.60 Aligned_cols=63 Identities=17% Similarity=0.270 Sum_probs=53.4
Q ss_pred CceeecccCCCChhhhC-CCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEEE
Q 040736 212 PGVLVPEVRALSAASRD-GLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQF 278 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~A-GL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~~ 278 (448)
.+++|.+|.++|||+++ ||++||+|++|||+++.+ .+++++.+.++.. +++++++|.|+++..
T Consensus 53 ~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~---~~~~~~~~~l~~~-~~~v~l~v~r~g~~~ 116 (120)
T 2iwo_A 53 VPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEG---MTHTQAVNLLKNA-SGSIEMQVVAGGDVS 116 (120)
T ss_dssp EEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTT---CBHHHHHHHHHHC-CSEEEEEEECCTTSS
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCC---CCHHHHHHHHHcC-CCeEEEEEEECCccc
Confidence 36889999999999998 999999999999999932 4578888888865 456999999988643
No 124
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.72 E-value=1.2e-08 Score=85.39 Aligned_cols=62 Identities=27% Similarity=0.447 Sum_probs=53.7
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQ 277 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~ 277 (448)
.|++|.+|.++|||+++| |++||+|++|||+++.+ .++.++...++. .++++++++.|+++.
T Consensus 42 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~---~~~~~~~~~~~~-~g~~v~l~v~R~~~~ 104 (108)
T 1q7x_A 42 GGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEG---ATHKQAVETLRN-TGQVVHLLLEKGQSP 104 (108)
T ss_dssp CCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBS---CTTSHHHHHHHH-TTSEEEEEEECCCCS
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCeEEEEEEeCCcc
Confidence 578999999999999999 99999999999999932 377888888876 478999999998753
No 125
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.72 E-value=1.3e-08 Score=84.84 Aligned_cols=60 Identities=17% Similarity=0.227 Sum_probs=49.8
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHc-CCCCcEEEEEEeCCEE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKK-SPKRNVLLKVARGEQQ 277 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~-~~g~~V~l~V~R~G~~ 277 (448)
.+++|.+|.++|||+ +||++||+|++|||+++ .++++....... .+++++++++.|+++.
T Consensus 39 ~gv~V~~V~~~spA~-agl~~GD~I~~vng~~v-----~~~~~~~~~~~~~~~g~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 39 TSIVISDVLKGGPAE-GQLQENDRVAMVNGVSM-----DNVEHAFAVQQLRKSGKNAKITIRRKKGG 99 (107)
T ss_dssp CCEEEEEECTTSTTB-TTBCTTCEEEEETTEEC-----TTCCHHHHHHHHHTCCSEEEEEEEEESCC
T ss_pred CCEEEEEECCCCchh-hCCCCCCEEEEECCEEC-----CCccHHHHHHHhhCCCCEEEEEEEECCCC
Confidence 478999999999999 99999999999999999 666555444332 5688999999998753
No 126
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=98.71 E-value=1.5e-09 Score=108.66 Aligned_cols=69 Identities=30% Similarity=0.482 Sum_probs=0.0
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEEEEEEEeeccc
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQFEIGVTPDEN 287 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~~~l~v~p~~~ 287 (448)
.|++|.+|.++|||++|||++||+|++|||+++ .+++|+.+.++. +++++++|.|+|+.++++++|...
T Consensus 254 ~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v-----~~~~~~~~~l~~--~~~v~l~v~R~g~~~~~~v~p~~~ 322 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGGLKENDVIISINGQSV-----VSANDVSDVIKR--ESTLNMVVRRGNEDIMITVIPEEI 322 (332)
T ss_dssp ----------------------------------------------------------------------------
T ss_pred CceEEEEeccCCChHHcCCCCCCEEEEECCEEC-----CCHHHHHHHHhC--CCeEEEEEEECCEEEEEEEEEeee
Confidence 578999999999999999999999999999999 889999888864 778999999999999999998754
No 127
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.71 E-value=2.1e-08 Score=83.07 Aligned_cols=60 Identities=18% Similarity=0.312 Sum_probs=52.6
Q ss_pred CceeecccCCCChhhh-CCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcC-CCCcEEEEEEeC
Q 040736 212 PGVLVPEVRALSAASR-DGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKS-PKRNVLLKVARG 274 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~-AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~-~g~~V~l~V~R~ 274 (448)
++++|.+|.++|||++ +||++||+|++|||+++.+ .+++|+.+.++.. +++++++++.|.
T Consensus 37 ~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~---~~~~~~~~~l~~~~~g~~v~l~v~R~ 98 (101)
T 2yt7_A 37 PTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVG---LPLAACQAAVRETKSQTSVTLSIVHC 98 (101)
T ss_dssp CCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTT---SCHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred cCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHhCCCCCeEEEEEEeC
Confidence 4689999999999999 6799999999999999943 6899999999875 688999998874
No 128
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.70 E-value=1.9e-08 Score=84.31 Aligned_cols=60 Identities=30% Similarity=0.454 Sum_probs=53.2
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeC
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARG 274 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~ 274 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++..++++++++|.|.
T Consensus 44 ~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~---~~~~~~~~~l~~~~~~~v~l~v~R~ 104 (108)
T 2d92_A 44 SVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDN---TSLAEAVEILKAVPPGLVHLGICSG 104 (108)
T ss_dssp EEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTT---CCHHHHHHHHHHSCSEEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCC---CCHHHHHHHHHhCCCCeEEEEEEcC
Confidence 578999999999999999 99999999999999932 4689999999887667899999885
No 129
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.70 E-value=1.9e-08 Score=87.09 Aligned_cols=62 Identities=26% Similarity=0.315 Sum_probs=54.3
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCC-CCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSP-KRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~-g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++|+.+.++..+ +++++++|.|++.
T Consensus 43 ~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~---~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 106 (129)
T 2kpk_A 43 EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLG---HTHAQVVKIFQSIPIGASVDLELCRGYP 106 (129)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTT---SCHHHHHHHHHHSCTTEEEEEEEEECSC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHhCCCCCeEEEEEEeCCC
Confidence 457999999999999999 99999999999999932 36889999998765 8899999999873
No 130
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.70 E-value=2.5e-08 Score=86.13 Aligned_cols=62 Identities=24% Similarity=0.298 Sum_probs=53.8
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.. ..+++++.+.++. .+++++++|.|+..
T Consensus 54 ~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~--~~~~~~~~~~l~~-~~~~v~l~v~r~~~ 116 (128)
T 2db5_A 54 VDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQ--NISHQQAIALLQQ-TTGSLRLIVAREPV 116 (128)
T ss_dssp EEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCST--TSCHHHHHHHHHH-CCSEEEEEEEECCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC--CCCHHHHHHHHHc-CCCeEEEEEEcCCC
Confidence 478999999999999999 99999999999999920 1389999998986 67889999999764
No 131
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.70 E-value=1.5e-08 Score=86.32 Aligned_cols=60 Identities=27% Similarity=0.416 Sum_probs=53.9
Q ss_pred ceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 213 GVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 213 gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
+++|.+|.++|||+++| |++||+|++|||+++.+ .+++|+.+.++ ..+++++++|.|+++
T Consensus 43 ~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~---~~~~~~~~~l~-~~g~~v~l~v~r~~~ 103 (117)
T 1v62_A 43 VITIDRIKPASVVDRSGALHPGDHILSIDGTSMEH---CSLLEATKLLA-SISEKVRLEILPVPQ 103 (117)
T ss_dssp EEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTS---CCHHHHHHHHH-SCSSEEEEEECCBTT
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHH-hCCCeEEEEEEECCC
Confidence 48999999999999999 99999999999999943 57999999998 478899999999875
No 132
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.69 E-value=2.7e-08 Score=80.87 Aligned_cols=61 Identities=23% Similarity=0.396 Sum_probs=51.9
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++...+ ++++++.|..+
T Consensus 28 ~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~---~~~~~~~~~l~~~~~-~v~l~v~~~~~ 89 (93)
T 3o46_A 28 GAIIVARIMRGGAADRSGLIHVGDELREVNGIPVED---KRPEEIIQILAQSQG-AITFKIIPGSK 89 (93)
T ss_dssp CCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTT---SCHHHHHHHHHHCCE-EEEEEEECC--
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHhCCC-eEEEEEEeCCC
Confidence 567899999999999999 99999999999999943 688999999987654 88888887653
No 133
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.69 E-value=2.5e-08 Score=81.23 Aligned_cols=56 Identities=16% Similarity=0.274 Sum_probs=48.6
Q ss_pred eecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeC
Q 040736 215 LVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARG 274 (448)
Q Consensus 215 vV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~ 274 (448)
+|.+|.++|||+++||++||+|++|||+++.+ .+++|+.+.++. .++++++++.+.
T Consensus 34 ~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~---~~~~~~~~~l~~-~g~~v~l~v~p~ 89 (90)
T 1y7n_A 34 IICSLMRGGIAERGGVRVGHRIIEINGQSVVA---TPHEKIVHILSN-AVGEIHMKTMPA 89 (90)
T ss_dssp EEEEECTTSHHHHHTCCSSCEEEEETTEECTT---SCHHHHHHHHHH-CCEEEEEEEECC
T ss_pred EEEEECCCCHHHHcCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCeEEEEEEEC
Confidence 78899999999999999999999999999932 479999999985 477888888764
No 134
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.69 E-value=3.5e-08 Score=80.48 Aligned_cols=60 Identities=30% Similarity=0.376 Sum_probs=50.2
Q ss_pred CCceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCC
Q 040736 211 FPGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGE 275 (448)
Q Consensus 211 ~~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G 275 (448)
..+++|.+|.++|||++ ||++||+|++|||+++.+ .++.+....++ ..+++++++|.|+.
T Consensus 34 ~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~---~~~~~~~~~~~-~~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 34 DDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFIN---IEHGQAVSLLK-TFQNTVELIIVREV 93 (95)
T ss_dssp CCCEEEEEECTTSTTTT-TCCTTCEEEEETTEECTT---CBHHHHHHHHH-HCCSEEEEEEEEEC
T ss_pred CCCEEEEEECCCCchhh-CCCCCCEEEEECCEEcCC---CCHHHHHHHhh-cCCCeEEEEEEeCC
Confidence 45889999999999999 999999999999999932 34677777776 35788999999864
No 135
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.69 E-value=2.2e-08 Score=82.92 Aligned_cols=61 Identities=26% Similarity=0.333 Sum_probs=51.1
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .++.+....++. .++++++++.|+++
T Consensus 35 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~---~~~~~~~~~~~~-~~~~v~l~v~r~~~ 96 (104)
T 3i4w_A 35 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRN---ASHEQAAIALKN-AGQTVTIIAQYKPE 96 (104)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTT---CCHHHHHHHHHT-SCSEEEEEEEECHH
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCeEEEEEEECcc
Confidence 478999999999999999 99999999999999932 456666666664 67889999998753
No 136
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.68 E-value=3.7e-08 Score=79.46 Aligned_cols=58 Identities=36% Similarity=0.514 Sum_probs=49.4
Q ss_pred CceeecccCCCChhhhC-CCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEe
Q 040736 212 PGVLVPEVRALSAASRD-GLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVAR 273 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~A-GL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R 273 (448)
.+++|.+|.++|||+++ ||++||+|++|||+++.+ .++.++.+.++. .++++++++.|
T Consensus 30 ~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~---~~~~~~~~~~~~-~~~~v~l~v~r 88 (90)
T 1qav_A 30 MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSS---ATHDEAVQALKK-TGKEVVLEVKY 88 (90)
T ss_dssp EEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTT---CCHHHHHHHHHT-CCSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHh-CCCeEEEEEEE
Confidence 46789999999999999 999999999999999932 367888887875 46789999887
No 137
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.68 E-value=2.2e-08 Score=81.44 Aligned_cols=59 Identities=22% Similarity=0.391 Sum_probs=51.5
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCC
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGE 275 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G 275 (448)
.+++|.+|.++|||+++| |++||+|++|||+++ + .+++|+.+.++.. ++++++++.|..
T Consensus 29 ~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~---~~~~~~~~~l~~~-~~~v~l~v~~~~ 88 (91)
T 2e7k_A 29 GELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-G---SDPRALQELLRNA-SGSVILKILSGP 88 (91)
T ss_dssp SSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-T---TCHHHHHHHHHTC-CSSBCEEEECCS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-C---CCHHHHHHHHHcC-CCeEEEEEEECC
Confidence 468999999999999987 999999999999999 4 6899999999864 668889888753
No 138
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.68 E-value=6.4e-08 Score=80.78 Aligned_cols=61 Identities=26% Similarity=0.460 Sum_probs=52.2
Q ss_pred CCceeecccCCCChhhhC-CCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCC
Q 040736 211 FPGVLVPEVRALSAASRD-GLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGE 275 (448)
Q Consensus 211 ~~gvvV~~V~~gSpA~~A-GL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G 275 (448)
..+++|.+|.++|||+++ ||++||+|++|||+++.+ .+++++.+.++. .+++++++|.|++
T Consensus 40 ~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~---~~~~~~~~~~~~-~~~~v~l~v~R~~ 101 (107)
T 1uhp_A 40 SEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSR---ATHDQAVEAFKT-AKEPIVVQVLRRT 101 (107)
T ss_dssp SCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTT---CCHHHHHHHHHH-CCSSEEEEEEECC
T ss_pred CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCcEEEEEEeCC
Confidence 357899999999999999 999999999999999932 457888888875 4678999999865
No 139
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.67 E-value=2.7e-08 Score=86.06 Aligned_cols=61 Identities=25% Similarity=0.447 Sum_probs=53.4
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
+|++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++.. ++++++++.|+++
T Consensus 65 ~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~---~~~~~~~~~l~~~-~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 65 PGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSG---KSLDQVTDMMIAN-SRNLIITVRPANQ 126 (128)
T ss_dssp EEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTT---CCHHHHHHHHHHT-TTSEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCC---CCHHHHHHHHHcC-CCeEEEEEEECCc
Confidence 478999999999999999 99999999999999943 6789999988854 4579999999875
No 140
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.67 E-value=3e-08 Score=81.39 Aligned_cols=59 Identities=25% Similarity=0.327 Sum_probs=50.5
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCC
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGE 275 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G 275 (448)
.+++|.+|.++|||+ +||++||+|++|||+++.+ .++.++.+.++. .+++++++|.|++
T Consensus 31 ~~~~V~~V~~~spA~-agL~~GD~Il~ing~~v~~---~~~~~~~~~~~~-~g~~v~l~v~R~~ 89 (96)
T 2edv_A 31 LPLTVVAVTAGGSAH-GKLFPGDQILQMNNEPAED---LSWERAVDILRE-AEDSLSITVVRCT 89 (96)
T ss_dssp SSCBCCCBCSSSSST-TTSCTTCBEEEESSCBSTT---CCHHHHHHHHHH-CSSCEEEEEEECC
T ss_pred CCeEEEEECCCCchh-hCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCeEEEEEEECC
Confidence 457899999999996 9999999999999999932 357788887776 6789999999976
No 141
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.66 E-value=4.5e-08 Score=81.08 Aligned_cols=61 Identities=30% Similarity=0.368 Sum_probs=51.1
Q ss_pred CCCceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCC
Q 040736 210 AFPGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGE 275 (448)
Q Consensus 210 ~~~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G 275 (448)
...+++|.+|.++|||++ ||++||+|++|||+++.+ .++.+....++ ..++++++++.|+.
T Consensus 41 ~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~---~~~~~~~~~~~-~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 41 DDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFIN---IEHGQAVSLLK-TFQNTVELIIVREV 101 (103)
T ss_dssp SCCSEECCCBSSSSTTSS-SCCTTCEEEEETTEECSS---CCHHHHHHHHH-HCCSEEEEEEECCC
T ss_pred CCCCEEEEEECCCCchHH-CCCCCCEEEEECCEECCC---CCHHHHHHHhh-cCCCeEEEEEEecC
Confidence 346899999999999999 999999999999999932 34777777776 45788999999864
No 142
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.66 E-value=2.5e-08 Score=91.11 Aligned_cols=63 Identities=32% Similarity=0.361 Sum_probs=54.4
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEEE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQF 278 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~~ 278 (448)
.|++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++. .++.+.++|.|+++..
T Consensus 130 ~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~---~~~~~~~~~l~~-~~~~v~l~v~R~~~~~ 193 (196)
T 3gsl_A 130 NSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLED---VMHEDAVAALKN-TYDVVYLKVAKPSNAE 193 (196)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSS---CBHHHHHHHHHS-CCEEEEEEEEEESCCC
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCC---CCHHHHHHHHHc-CCCeEEEEEeCCCCcc
Confidence 478999999999999999 99999999999999921 239999999975 4788999999988654
No 143
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.65 E-value=5.3e-08 Score=80.26 Aligned_cols=56 Identities=27% Similarity=0.277 Sum_probs=47.1
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEe
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVAR 273 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R 273 (448)
.+++|.+|.++|||++|||++||+|++|||+++.+ .+++|+.+.+++ ++++++|+.
T Consensus 35 ~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~---~~~~~l~~~l~~---~~l~ltV~~ 90 (94)
T 3kzd_A 35 RRLYVNSVKETGLASKKGLKAGDEILEINNRAADA---LNSSMLKDFLSQ---PSLGLLVRT 90 (94)
T ss_dssp CEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGG---CCHHHHHHHHHS---SEEEEEEEE
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCC---CCHHHHHHHHhC---CeEEEEEEe
Confidence 47899999999999999999999999999999932 368999988873 457776653
No 144
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.65 E-value=2.5e-08 Score=83.80 Aligned_cols=62 Identities=27% Similarity=0.401 Sum_probs=53.0
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQ 277 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~ 277 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++. .+++++++|.|+++.
T Consensus 38 ~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~---~~~~~~~~~l~~-~g~~v~l~v~R~~~~ 100 (111)
T 2dlu_A 38 SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQG---MTSEQVAQVLRN-CGNSVRMLVARDPAG 100 (111)
T ss_dssp SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTT---SCHHHHHHHHHH-HCSEEEEEEEESCTT
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHh-CCCeEEEEEEeCCCC
Confidence 478999999999999999 99999999999999932 267888888875 467899999998754
No 145
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.65 E-value=4e-08 Score=80.77 Aligned_cols=60 Identities=25% Similarity=0.408 Sum_probs=51.1
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCC-CCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSP-KRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~-g~~V~l~V~R~G~ 276 (448)
.|++|.+|.+ +|+++||++||+|++|||+++.+ .+++|+.+.++..+ +++++++|.|+++
T Consensus 32 ~Gv~V~~v~~--~a~~aGL~~GD~I~~vng~~v~~---~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 92 (96)
T 1ujv_A 32 TGQRVKQILD--IQGCPGLCEGDLIVEINQQNVQN---LSHTEVVDILKDCPIGSETSLIIHRGSG 92 (96)
T ss_dssp TEEEEEEESC--GGGSTTCCSSCEEEEETTEECSS---CCHHHHHHHHHHSCTTSEEEEEEECCSS
T ss_pred CCEEEEEEec--ccccCCCCCCCEEEEECCEECCC---CCHHHHHHHHHcCCCCCEEEEEEEECCC
Confidence 4778899987 37899999999999999999932 35799999998864 8999999999875
No 146
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.65 E-value=3.9e-08 Score=83.89 Aligned_cols=63 Identities=32% Similarity=0.438 Sum_probs=52.9
Q ss_pred CCceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEE
Q 040736 211 FPGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQ 277 (448)
Q Consensus 211 ~~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~ 277 (448)
..+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++.. +++++++|.|+++.
T Consensus 46 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~---~~~~~~~~~~~~~-g~~v~l~v~R~~~~ 109 (120)
T 2eno_A 46 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKN---LLHQDAVDLFRNA-GYAVSLRVQHRLQV 109 (120)
T ss_dssp CCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCS---CCHHHHHHHHHHH-CSEEEEEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCC---CCHHHHHHHHHcC-CCeEEEEEEeCCcC
Confidence 3578999999999999999 99999999999999932 3466888877753 67899999997763
No 147
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.65 E-value=1e-07 Score=87.53 Aligned_cols=76 Identities=29% Similarity=0.370 Sum_probs=60.4
Q ss_pred ccccCCCCceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEe---CCEEEEEE
Q 040736 205 LPVQDAFPGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVAR---GEQQFEIG 281 (448)
Q Consensus 205 ~p~~~~~~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R---~G~~~~l~ 281 (448)
.|......|++|.+|.++|||++ ||++||+|++|||+++.+ .+..+....++.. ++.+.++|.| +|+..+++
T Consensus 17 ~~~~~~~~g~~V~~v~~~spA~~-gl~~GD~I~~vng~~v~~---~~~~~~~~~~~~~-~~~v~l~v~r~~~~G~~~~~~ 91 (195)
T 2qbw_A 17 NPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFIN---IEHGQAVSLLKTF-QNTVELIIVREVGNGAKQEIR 91 (195)
T ss_dssp CSSCTTCCSEEEEEECTTSTTTT-TCCTTCEEEEETTEECTT---CCHHHHHHHHHHC-CSEEEEEEEEECSSSCEEEEE
T ss_pred CccccCCCCEEEEEECCCChHHh-CCCCCCEEEEECCEECCC---CCHHHHHHHHHcC-CCeEEEEEEEcCCCCCCceeE
Confidence 34333346899999999999999 999999999999999932 3467777777654 4589999999 88887777
Q ss_pred Eeec
Q 040736 282 VTPD 285 (448)
Q Consensus 282 v~p~ 285 (448)
++..
T Consensus 92 v~~~ 95 (195)
T 2qbw_A 92 VRVE 95 (195)
T ss_dssp EEEE
T ss_pred eEee
Confidence 6654
No 148
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.65 E-value=3.4e-08 Score=82.44 Aligned_cols=61 Identities=26% Similarity=0.352 Sum_probs=52.1
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .++.++...++. .+++++++|.|++.
T Consensus 40 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~---~~~~~~~~~~~~-~~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 40 LGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVG---VTQNFAATVLRN-TKGNVRFVIGREKP 101 (107)
T ss_dssp EEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBS---CCHHHHHHHHHH-CCSEEEEEEEEECC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHhc-CCCeEEEEEEeCCC
Confidence 478999999999999999 99999999999999932 367788777775 47889999998653
No 149
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.64 E-value=3e-08 Score=80.33 Aligned_cols=61 Identities=30% Similarity=0.373 Sum_probs=50.9
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++.. ++++++++.|+++
T Consensus 30 ~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~---~~~~~~~~~~~~~-~~~v~l~v~r~~~ 91 (93)
T 2dkr_A 30 SPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEG---EQHEKAVELLKAA-QGSVKLVVRSGPS 91 (93)
T ss_dssp CCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTT---SCHHHHHHHHHHC-CSEEEEEECCCCS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHhC-CCcEEEEEEeCCC
Confidence 568999999999999996 99999999999999932 2678888888764 4579999988653
No 150
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.64 E-value=4.9e-08 Score=85.08 Aligned_cols=61 Identities=26% Similarity=0.306 Sum_probs=52.6
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.|++|.+|.++|||++|||++||+|++|||+++.+ .+++++.+.++. .++++.++|.|.++
T Consensus 65 ~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~---~~~~~~~~~l~~-~g~~v~l~v~~~~~ 125 (132)
T 3l4f_D 65 ALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVK---VGHRQVVNMIRQ-GGNTLMVKVVMVTR 125 (132)
T ss_dssp CSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTT---SCHHHHHHHHHH-TTTEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCEEEEEEEECCC
Confidence 37899999999999999999999999999999932 368888888876 66789999988664
No 151
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.63 E-value=3.3e-08 Score=81.08 Aligned_cols=60 Identities=20% Similarity=0.236 Sum_probs=48.3
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCC
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGE 275 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G 275 (448)
.|++|.+|.++|||+++| |++||+|++|||+++.+ .+.++....++. .+++++++|.|..
T Consensus 31 ~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~---~~~~~~~~~~~~-~~~~v~l~v~R~~ 91 (96)
T 2qkv_A 31 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEG---LPFQVSYALFKG-ANGKVSMEVTRPK 91 (96)
T ss_dssp SSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTT---CCHHHHHHHHHT-CSSEEEEEEECCC
T ss_pred CcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCC---CCHHHHHHHHhc-CCCcEEEEEEeCC
Confidence 578999999999999999 99999999999999932 245555555554 5567999998853
No 152
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.63 E-value=3.5e-08 Score=82.11 Aligned_cols=61 Identities=25% Similarity=0.447 Sum_probs=51.2
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++||++||+|++|||+++.+ .+++++.+.++. .++++.+++.|++.
T Consensus 32 ~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~---~~~~~~~~~~~~-~~~~v~l~v~r~~~ 92 (106)
T 2eei_A 32 KGVYMTDITPQGVAMRAGVLADDHLIEVNGENVED---ASHEEVVEKVKK-SGSRVMFLLVDKET 92 (106)
T ss_dssp CSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTT---CCHHHHHHHHHH-HCSEEEEEECCTTT
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCC---CCHHHHHHHHHh-CCCeEEEEEEcCch
Confidence 57899999999999999999999999999999932 357888877764 36788999988764
No 153
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.63 E-value=5.9e-09 Score=88.08 Aligned_cols=66 Identities=29% Similarity=0.491 Sum_probs=52.8
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCH--HHHHHHHHcCCCCcEEEEEEeC-CEEEEEEEee
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVV--SELVNAIKKSPKRNVLLKVARG-EQQFEIGVTP 284 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~--~dl~~~L~~~~g~~V~l~V~R~-G~~~~l~v~p 284 (448)
.+++|.+|.++|||+++||++||+|++|||+++ .++ .++.+.++.. +++++++.|+ |+..++++++
T Consensus 41 ~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v-----~~~~~~~~~~~~~~~--~~v~l~v~r~~g~~~~~~~~~ 109 (114)
T 1x5n_A 41 PGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDF-----SNLDHKEAVNVLKSS--RSLTISIVAAAGRELFMTDRS 109 (114)
T ss_dssp CSEEEEEECTTSTTTTTTCCTTCEEEEETTEET-----TSCCTTHHHHHHHHC--SSEEEEECSSTTTHHHHSSCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEEC-----CCCCHHHHHHHHhcC--CeEEEEEEcCCCCceEEEecc
Confidence 578999999999999999999999999999999 444 4466666643 5799999998 7655444433
No 154
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.62 E-value=5.1e-08 Score=101.81 Aligned_cols=65 Identities=32% Similarity=0.430 Sum_probs=59.8
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEEEEEEE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQFEIGV 282 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~~~l~v 282 (448)
.|++|.+|.++|||+++||++||+|++|||+++ .+++|+.+.++. .++.+.++|.|+|+.+.+++
T Consensus 386 ~Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~v-----~~~~~~~~~l~~-~~~~v~l~v~R~g~~~~v~l 450 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAGIRPGDIIISANKKPV-----TDVKSLQTIAQE-KKKELLVQVLRGPGSMYLLV 450 (451)
T ss_dssp EEEEEEEECTTSHHHHHTCCTTCEEEEETTEEC-----CSHHHHHHHTTS-SCSCEEEEEEETTEEEEEEE
T ss_pred CceEEEEECCCCHHHHcCCCCCCEEEEECCEEC-----CCHHHHHHHHhc-CCCeEEEEEEECCEEEEEEe
Confidence 478999999999999999999999999999999 899999999986 67889999999999887765
No 155
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.62 E-value=4.3e-08 Score=82.23 Aligned_cols=60 Identities=20% Similarity=0.239 Sum_probs=48.4
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCC
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGE 275 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G 275 (448)
.|++|.+|.++|||+++| |++||+|++|||+++.+ .+.++....++. .++++++++.|..
T Consensus 25 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~---~~~~~~~~~~~~-~~~~v~l~v~R~~ 85 (106)
T 2la8_A 25 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEG---LPFQVCYALFKG-ANGKVSMEVTRPK 85 (106)
T ss_dssp SSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSS---SCHHHHHHHHHS-CBSCEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCC---CCHHHHHHHHhC-CCCeEEEEEEeCC
Confidence 578999999999999999 99999999999999932 245555555554 4567999999853
No 156
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.62 E-value=4.8e-08 Score=90.29 Aligned_cols=60 Identities=25% Similarity=0.353 Sum_probs=53.4
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|..|.++|||+++||++||+|++|||+++.+ .+++++.+.++. +++++++|.|+|+
T Consensus 110 ~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~---~~~~~~~~~l~~--~~~v~l~v~r~g~ 169 (192)
T 3k1r_A 110 CGLFISHLIKGGQADSVGLQVGDEIVRINGYSISS---CTHEEVINLIRT--EKTVSIKVRHIGL 169 (192)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTT---CCHHHHHHHHTS--SSEEEEEEEECCE
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCC---CCHHHHHHHHcC--CCeEEEEEEECCc
Confidence 46899999999999999999999999999999921 349999988876 7899999999987
No 157
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.62 E-value=5.8e-08 Score=83.07 Aligned_cols=61 Identities=30% Similarity=0.403 Sum_probs=52.3
Q ss_pred CCceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCC
Q 040736 211 FPGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGE 275 (448)
Q Consensus 211 ~~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G 275 (448)
..+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++.. +++++++|.|..
T Consensus 52 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~---~~~~~~~~~l~~~-~~~v~L~v~R~~ 113 (118)
T 3b76_A 52 DLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTE---VSRSEAVALLKRT-SSSIVLKALEVK 113 (118)
T ss_dssp CCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGG---SCHHHHHHHHHSC-CSEEEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCC---CCHHHHHHHHHcC-CCeEEEEEEECC
Confidence 3578999999999999999 99999999999999922 3889999988864 677999998743
No 158
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.62 E-value=1.3e-07 Score=86.20 Aligned_cols=67 Identities=30% Similarity=0.339 Sum_probs=52.3
Q ss_pred CCceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCH--HHHHHHHHcCCCCcEEEEEEeCC--EEEEEEEe
Q 040736 211 FPGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVV--SELVNAIKKSPKRNVLLKVARGE--QQFEIGVT 283 (448)
Q Consensus 211 ~~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~--~dl~~~L~~~~g~~V~l~V~R~G--~~~~l~v~ 283 (448)
..+++|.+|.++|||++|| |++||+|++|||+++ .++ .+....++ ..++++++++.|++ ....++++
T Consensus 34 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v-----~~~~~~~~~~~~~-~~g~~v~l~v~r~~~~~~~~~~v~ 105 (196)
T 3gsl_A 34 DPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDV-----REVTHSAAVEALK-EAGSIVRLYVMRRKPPAEKVMEIK 105 (196)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEEC-----TTCCHHHHHHHHH-TSCSEEEEEEEEECCCCEEEEEEE
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEEC-----CCCCHHHHHHHHH-hCCCcEEEEEEecCCCccccEEEE
Confidence 3578999999999999999 999999999999999 544 34444444 45789999999977 33444444
No 159
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.61 E-value=5.2e-08 Score=78.73 Aligned_cols=58 Identities=31% Similarity=0.469 Sum_probs=49.5
Q ss_pred ceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeC
Q 040736 213 GVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARG 274 (448)
Q Consensus 213 gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~ 274 (448)
+++|.+|.++|||+++| |++||+|++|||+++.+ .+++|+.+.++... .++++++.+.
T Consensus 22 gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~---~~~~~~~~~i~~~~-~~v~L~v~~~ 80 (88)
T 3e17_A 22 QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTEN---MSLTDARKLIEKSR-GKLQLVVLRD 80 (88)
T ss_dssp EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT---CCHHHHHHHHHHTT-TEEEEEECCC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHcCC-CeEEEEEeCC
Confidence 57899999999999999 99999999999999943 68899999998754 4677777653
No 160
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.61 E-value=6.3e-08 Score=80.66 Aligned_cols=60 Identities=25% Similarity=0.274 Sum_probs=49.7
Q ss_pred CceeecccCCCChhhhCC--CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCC---CCcEEEEEEeC
Q 040736 212 PGVLVPEVRALSAASRDG--LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSP---KRNVLLKVARG 274 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG--L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~---g~~V~l~V~R~ 274 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++... +..++++|.|+
T Consensus 43 ~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~---~~~~~~~~~i~~~~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 43 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAE---HTHDQVVLFIKASCERHSGELMLLVRPN 107 (107)
T ss_dssp EEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTT---CCHHHHHHHHHCGGGSBTTBEEEEEECC
T ss_pred CCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCC---CCHHHHHHHHHhccccCCcEEEEEEEcC
Confidence 357899999999999999 99999999999999932 35678888887643 35899999885
No 161
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.61 E-value=4.7e-08 Score=83.92 Aligned_cols=62 Identities=23% Similarity=0.281 Sum_probs=52.6
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQ 277 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~ 277 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .++.++...++.. +++++++|.|+++.
T Consensus 51 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~---~~~~~~~~~~~~~-~~~v~l~v~R~~~~ 113 (124)
T 2daz_A 51 MSIFVVGINPEGPAAADGRMRIGDELLEINNQILYG---RSHQNASAIIKTA-PSKVKLVFIRNEDA 113 (124)
T ss_dssp CCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTT---SCHHHHHHHHHHS-CSEEEEEEEECTTH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHcC-CCeEEEEEEeCCCc
Confidence 578999999999999999 99999999999999932 4577777777654 45899999998764
No 162
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.60 E-value=7.3e-08 Score=77.14 Aligned_cols=58 Identities=28% Similarity=0.440 Sum_probs=48.5
Q ss_pred CceeecccCCCChhhh-CCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEe
Q 040736 212 PGVLVPEVRALSAASR-DGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVAR 273 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~-AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R 273 (448)
.+++|.+|.++|||++ +||++||+|++|||+++.+ .+++++.+.++. .++++++++++
T Consensus 28 ~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~---~~~~~~~~~~~~-~~~~v~l~v~~ 86 (87)
T 4e34_A 28 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRD---TKHKEAVTILSQ-QRGEIEFEVVY 86 (87)
T ss_dssp EEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTT---CCHHHHHHHHHH-CCSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCeEEEEEEE
Confidence 3578999999999999 7999999999999999943 467888888875 45678888764
No 163
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.60 E-value=3.3e-08 Score=85.79 Aligned_cols=62 Identities=23% Similarity=0.268 Sum_probs=54.4
Q ss_pred CceeecccCCCChhhhC-CCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRD-GLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~A-GL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++ ||++||+|++|||+++.+ .+++|+.+.++..+++.+.++|+|++.
T Consensus 57 ~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~---~~~~~~~~~l~~~~~~~v~l~v~r~~~ 119 (130)
T 1i16_A 57 KPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQG---LTRFEAWNIIKALPDGPVTIVIRRKSL 119 (130)
T ss_dssp CCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGG---SCHHHHHHHHHTSCSSEEEEEEEEESS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHhCCCceEEEEEEeCCC
Confidence 45899999999999999 999999999999999932 358999999998777889999998654
No 164
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.60 E-value=1.7e-08 Score=84.94 Aligned_cols=62 Identities=26% Similarity=0.320 Sum_probs=53.0
Q ss_pred CCceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 211 FPGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 211 ~~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
..+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++. .+++++++|.|+..
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~---~~~~~~~~~l~~-~g~~v~l~v~r~~~ 105 (111)
T 1uju_A 43 DEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLG---LTHGEAVQLLRS-VGDTLTVLVCDGFE 105 (111)
T ss_dssp CCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTT---SCHHHHHHHHSS-CSSEEEECCCCCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCeEEEEEEECCC
Confidence 3578999999999999999 99999999999999922 378898888875 67889999988653
No 165
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.59 E-value=4.6e-08 Score=90.43 Aligned_cols=61 Identities=26% Similarity=0.373 Sum_probs=55.5
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCC--CHHHHHHHHHcCCCCcEEEEEEeCCEEE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPN--VVSELVNAIKKSPKRNVLLKVARGEQQF 278 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~--s~~dl~~~L~~~~g~~V~l~V~R~G~~~ 278 (448)
.+++|.+|.++|||+++| |++||+|++|||+++ . +++|+.+.++. .++++++++.|+++..
T Consensus 135 ~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v-----~~~~~~~~~~~l~~-~~~~v~l~v~R~~~~~ 198 (200)
T 2qt5_A 135 RPVVITCVRPGGPADREGTIKPGDRLLSVDGIRL-----LGTTHAEAMSILKQ-CGQEATLLIEYDVSVM 198 (200)
T ss_dssp EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEEC-----TTCCHHHHHHHHHT-TCSEEEEEEEEEEEC-
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEEC-----CCCCHHHHHHHHHc-CCCeEEEEEEECCccC
Confidence 478999999999999999 999999999999999 6 99999999987 7889999999987654
No 166
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.59 E-value=1e-07 Score=97.55 Aligned_cols=69 Identities=17% Similarity=0.244 Sum_probs=61.1
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCC--HHHHHHHHHcCCCCcEEEEEEeCCE---EEEEEEeec
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNV--VSELVNAIKKSPKRNVLLKVARGEQ---QFEIGVTPD 285 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s--~~dl~~~L~~~~g~~V~l~V~R~G~---~~~l~v~p~ 285 (448)
.+++|.+|.++|||++|||++||+|++|||+++ .+ .+++.+.++..+|+++++++.|+|+ .++++++++
T Consensus 99 ~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v-----~~~~~~~~~~~l~~~~g~~v~l~v~r~g~~~~~~~~~l~r~ 172 (388)
T 1fc6_A 99 KDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAV-----KGMSLYDVSDLLQGEADSQVEVVLHAPGAPSNTRTLQLTRQ 172 (388)
T ss_dssp SCEEEEEECTTSHHHHTTCCTTCEEEEETTEEC-----TTCCHHHHHHHHCBSTTCEEEEEEEETTEEEEEEEEEEECB
T ss_pred CcEEEEEeCCCChHHHcCCCCCCEEEEECCEEC-----CCCCHHHHHHHHhcCCCCEEEEEEEeCCCCcceEEEEEEEc
Confidence 578999999999999999999999999999999 45 4788888887788999999999998 777877764
No 167
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.58 E-value=3e-08 Score=85.77 Aligned_cols=62 Identities=23% Similarity=0.349 Sum_probs=53.4
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcC------CCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKS------PKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~------~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++.. ++++++++|.|+++
T Consensus 55 ~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~---~~~~~~~~~l~~~~~~~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 55 LGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLG---KSNHEAMETLRRSMSMEGNIRGMIQLVILRRSG 123 (127)
T ss_dssp EEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTT---SCHHHHHHHHHHHHHHHHHHTCEEEEEEEECSC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCC---CCHHHHHHHHHHhhccccCCCCEEEEEEEeCCC
Confidence 368999999999999999 99999999999999932 4578998888754 47899999999764
No 168
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.58 E-value=1.8e-08 Score=85.73 Aligned_cols=62 Identities=24% Similarity=0.274 Sum_probs=52.0
Q ss_pred ceeecccCCCChhhhC--CCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCC---CCcEEEEEEeCCEE
Q 040736 213 GVLVPEVRALSAASRD--GLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSP---KRNVLLKVARGEQQ 277 (448)
Q Consensus 213 gvvV~~V~~gSpA~~A--GL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~---g~~V~l~V~R~G~~ 277 (448)
+++|.+|.++|||++| ||++||+|++|||+++.+ .+++++.+.++... ++++.++|.|+...
T Consensus 42 ~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~---~~~~~~~~~~~~~~~~~~~~v~l~v~R~~~~ 108 (119)
T 2cs5_A 42 PVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAE---HTHDQVVLFIKASCERHSGELMLLVRPNAVY 108 (119)
T ss_dssp EEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTS---SCHHHHHHHHHHHHHCCSSCEEEEEECCCCC
T ss_pred CeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCC---CCHHHHHHHHHhccccCCCEEEEEEEccccc
Confidence 5789999999999999 999999999999999932 45788888887643 25899999998653
No 169
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.58 E-value=8.2e-08 Score=81.50 Aligned_cols=58 Identities=24% Similarity=0.364 Sum_probs=49.5
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEe
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVAR 273 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R 273 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.. .+++|+.+.++... +++++++.+
T Consensus 50 ~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~---~~~~~~~~~l~~~~-~~v~l~v~~ 108 (114)
T 2gzv_A 50 PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKG---KTKVEVAKMIQEVK-GEVTIHYNK 108 (114)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT---CCHHHHHHHHHHCC-SEEEEEEEC
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCC---CCHHHHHHHHHcCC-CeEEEEEEe
Confidence 468999999999999999 99999999999999943 68899998888654 458888765
No 170
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.58 E-value=7.9e-08 Score=82.57 Aligned_cols=58 Identities=24% Similarity=0.363 Sum_probs=50.4
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEe
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVAR 273 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R 273 (448)
.+++|.+|.++|||++|| |++||+|++|||+++.+ .+++++.+.++...+ ++++++.|
T Consensus 45 ~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~---~~~~~~~~~l~~~~~-~v~l~v~r 103 (125)
T 3hpk_A 45 PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKG---KTKVEVAKMIQEVKG-EVTIHYNK 103 (125)
T ss_dssp SSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT---CCHHHHHHHHHHSCS-EEEEEEEE
T ss_pred CCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCC---CCHHHHHHHHHcCCC-eEEEEEEE
Confidence 467899999999999999 99999999999999932 378999999987554 59999987
No 171
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.57 E-value=4.6e-08 Score=83.29 Aligned_cols=58 Identities=26% Similarity=0.242 Sum_probs=48.7
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCC
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGE 275 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G 275 (448)
.+++|.+|.++|||++|||++||+|++|||+++.+ .+++++.+.++. ++++++|.|..
T Consensus 44 ~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~---~~~~~~~~~l~~---~~v~l~v~R~p 101 (114)
T 2d8i_A 44 RRLYVNSVKETGLASKKGLKAGDEILEINNRAADA---LNSSMLKDFLSQ---PSLGLLVRTYP 101 (114)
T ss_dssp EEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGG---CCHHHHHHHHTS---SEEEEEEEECC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCC---cCHHHHHHHHhC---CcEEEEEEECC
Confidence 36889999999999999999999999999999932 236788888863 47888888854
No 172
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.57 E-value=8.2e-08 Score=81.44 Aligned_cols=61 Identities=31% Similarity=0.396 Sum_probs=52.1
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+++++.+.++. .+++++++|.|..+
T Consensus 50 ~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~---~~~~~~~~~~~~-~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 50 KGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQN---ASHSEAVEAIKN-AGNPVVFIVQSLSS 111 (117)
T ss_dssp CSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTT---CCHHHHHHHHHT-SCSSEEEEECCBSC
T ss_pred CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCeEEEEEEECCC
Confidence 578999999999999999 99999999999999932 457788888875 57889999987653
No 173
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=98.57 E-value=7.6e-08 Score=77.28 Aligned_cols=55 Identities=18% Similarity=0.271 Sum_probs=47.7
Q ss_pred eecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEe
Q 040736 215 LVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVAR 273 (448)
Q Consensus 215 vV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R 273 (448)
.|..|.++|||+++||++||+|++|||+.+.+ .+.+|+.+.++ ..+.+++++|..
T Consensus 26 ~I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~---~~~~evv~llr-~~g~~V~L~v~p 80 (82)
T 1r6j_A 26 KITSIVKDSSAARNGLLTEHNICEINGQNVIG---LKDSQIADILS-TSGTVVTITIMP 80 (82)
T ss_dssp EEEEECTTSHHHHHTCCSSEEEEEETTEECTT---CCHHHHHHHHH-HSCSEEEEEEEE
T ss_pred EEEEecCCCHHHHcCCCCCCEEEEECCEEcCC---CCHHHHHHHHh-cCCCEEEEEEEe
Confidence 36789999999999999999999999999943 67889999998 577889988764
No 174
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.56 E-value=4.5e-08 Score=81.30 Aligned_cols=56 Identities=23% Similarity=0.282 Sum_probs=47.9
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKV 271 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V 271 (448)
.+++|.+|.++|||+++||++||+|++|||+++.+ .+++|+.+.++..++ +++++|
T Consensus 48 ~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~---~~~~~~~~~l~~~~~-~v~l~v 103 (104)
T 2z17_A 48 MFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEG---FTYKQVVDLIRSSGN-LLTIET 103 (104)
T ss_dssp CCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTT---CCHHHHHHHHHHTTT-EEEEEC
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCC---CCHHHHHHHHHhCCC-cEEEEE
Confidence 47899999999999999999999999999999921 288999999987654 677654
No 175
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.54 E-value=2.6e-08 Score=103.91 Aligned_cols=69 Identities=25% Similarity=0.389 Sum_probs=61.7
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHc-CCCCcEEEEEEeCCEEEEEEEeec
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKK-SPKRNVLLKVARGEQQFEIGVTPD 285 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~-~~g~~V~l~V~R~G~~~~l~v~p~ 285 (448)
.|++|.+|.++|||++|||++||+|++|||+++ ++++|+...+.. .+|++++++|.|+|+..++++++.
T Consensus 286 ~G~~V~~V~~gspA~~AGL~~GDvI~~inG~~v-----~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~ 355 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPI-----SSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQ 355 (448)
T ss_dssp CSEECCCCTTCSSSTTTTCCTTCEECBSSSSBC-----CSSHHHHHHTTSSBTTCCCEEEEESSSCEEECCCC--
T ss_pred CceEEEEeccCCHHHHcCCCCCCEEEEECCEEc-----CCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEe
Confidence 589999999999999999999999999999999 889999998876 568899999999999888877764
No 176
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.53 E-value=4.6e-08 Score=81.54 Aligned_cols=62 Identities=23% Similarity=0.216 Sum_probs=52.0
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcC----CCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKS----PKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~----~g~~V~l~V~R~G~ 276 (448)
+.++|..|.++|||+++| |++||+|++|||+++.+ .+++|+.+.++.. .++++++++.|.++
T Consensus 32 ~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~---~~~~~~~~~l~~~~~~~~~~~i~l~v~r~~~ 98 (103)
T 1ufx_A 32 PLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRG---KEHREAARIIAEAFKTKDRDYIDFLVTEFNS 98 (103)
T ss_dssp SSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTT---CBHHHHHHHHHHHHHCSSCSEEEEEECCCCC
T ss_pred CcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCC---CCHHHHHHHHHHhcccCCCCeEEEEEEEccc
Confidence 345899999999999999 99999999999999932 4699999888763 57788888888653
No 177
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.53 E-value=1.3e-07 Score=87.36 Aligned_cols=58 Identities=22% Similarity=0.426 Sum_probs=53.7
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCC--HHHHHHHHHcCCCCcEEEEEEeCC
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNV--VSELVNAIKKSPKRNVLLKVARGE 275 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s--~~dl~~~L~~~~g~~V~l~V~R~G 275 (448)
.+++|.+|.++|||+++| |++||+|++|||+++ .+ ++|+.+.++.. ++++.++|.|++
T Consensus 135 ~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v-----~~~~~~~~~~~l~~~-~~~v~l~v~R~~ 195 (196)
T 1p1d_A 135 DPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRL-----DSCSMEDAVQILQQC-EDLVKLKIRKDE 195 (196)
T ss_dssp CCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEG-----GGCCHHHHHHHHHHC-TTCEEEEEECCC
T ss_pred CCEEEEEECCCCcHHhcCCCCCCCEEEEECCEEC-----CCCCHHHHHHHHHhC-CCEEEEEEEeCC
Confidence 578999999999999999 999999999999999 55 99999999877 889999999986
No 178
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.52 E-value=1e-07 Score=80.02 Aligned_cols=61 Identities=28% Similarity=0.339 Sum_probs=50.3
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||+++| |++||+|++|||+++.+ .+..++...++ ..++++.+++.|+++
T Consensus 39 ~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~---~~~~~~~~~~~-~~~~~v~l~v~r~~~ 100 (113)
T 1um7_A 39 EGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRN---ATHEQAAAALK-RAGQSVTIVAQYRPE 100 (113)
T ss_dssp CCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTT---CCHHHHHHHHH-SCCSEEEEEEECCHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHH-hCCCcEEEEEEECcc
Confidence 578899999999999999 99999999999999932 23467776666 457889999998764
No 179
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.51 E-value=2e-07 Score=77.39 Aligned_cols=60 Identities=27% Similarity=0.390 Sum_probs=50.4
Q ss_pred ceeecccCCCChhhh-CCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 213 GVLVPEVRALSAASR-DGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 213 gvvV~~V~~gSpA~~-AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
+++|.+|.++|||++ +||++||+|++|||+++.+ .+++++.+.++... .++++++.|...
T Consensus 36 ~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~---~~~~~~~~~l~~~~-~~v~l~v~~~~~ 96 (103)
T 2dc2_A 36 PILISEIHPGQPADRCGGLHVGDAILAVNGVNLRD---TKHKEAVTILSQQR-GEIEFEVVYVAL 96 (103)
T ss_dssp EEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTT---SCHHHHHHHHHHCC-SEEEEEEEECC-
T ss_pred CEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCC---CCHHHHHHHHHhCC-CcEEEEEEecCC
Confidence 578999999999999 5999999999999999932 46889988888654 478998888653
No 180
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.50 E-value=4.9e-08 Score=82.88 Aligned_cols=61 Identities=20% Similarity=0.242 Sum_probs=51.3
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQ 277 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~ 277 (448)
.+++|.+|.++|||+ +||++||+|++|||+++.+ .+++++...++. .+++++++|.|+++.
T Consensus 46 ~gv~V~~V~~~spA~-~gL~~GD~I~~Vng~~v~~---~~~~~~~~~l~~-~~~~v~l~v~R~~~~ 106 (117)
T 2csj_A 46 TSIVISDVLPGGPAD-GLLQENDRVVMVNGTPMED---VLHSFAVQQLRK-SGKIAAIVVKRPRKV 106 (117)
T ss_dssp CBCEEEEECTTSSHH-HHBCTTCEEEEESSCBCBT---CCHHHHHHHHHH-SCSEEEEEEEEEEEC
T ss_pred CCEEEEEECCCCccc-ccCCCCCEEEEECCEECCC---cCHHHHHHHHhc-CCCeEEEEEEECCcc
Confidence 468999999999997 8999999999999999932 456778787776 578999999996653
No 181
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.49 E-value=1.1e-07 Score=80.81 Aligned_cols=59 Identities=29% Similarity=0.365 Sum_probs=48.3
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHH--HHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVS--ELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~--dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||++|| |++||+|++|||+++ .+++ +....++ ..++++.+++.|+++
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v-----~~~~~~~~~~~~~-~~~~~v~l~v~r~~~ 99 (119)
T 1tp5_A 38 EGIFISFILAGGPADLSGELRKGDQILSVNGVDL-----RNASHEQAAIALK-NAGQTVTIIAQYKPE 99 (119)
T ss_dssp CCEEEEEECTTSHHHHHSCCCTTEEEEEETTEEC-----TTCCHHHHHHHHH-TSCSEEEEEEEECHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-----CCCCHHHHHHHHH-cCCCeEEEEEEECCc
Confidence 578999999999999999 999999999999999 5553 3344444 467889999998763
No 182
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.48 E-value=3.5e-07 Score=84.49 Aligned_cols=58 Identities=28% Similarity=0.305 Sum_probs=50.7
Q ss_pred CceeecccCCCChhhhC-CCCCCCEEEEECCeecCCCCCCCH--HHHHHHHHcCCCCcEEEEEEeCC
Q 040736 212 PGVLVPEVRALSAASRD-GLFPGDVILSVNGNEFPKTGPNVV--SELVNAIKKSPKRNVLLKVARGE 275 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~A-GL~~GDvIlsInG~~V~~~~~~s~--~dl~~~L~~~~g~~V~l~V~R~G 275 (448)
.+++|.+|.++|||++| ||++||+|++|||+++ .++ +++...++. .++++++++.|++
T Consensus 33 ~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v-----~~~~~~~~~~~~~~-~g~~v~l~v~R~~ 93 (200)
T 2qt5_A 33 GKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINL-----AKFRHDEIISLLKN-VGERVVLEVEYEL 93 (200)
T ss_dssp SCSEEEEECTTSHHHHTTSCCTTCEEEEETTEEC-----TTSCHHHHHHHHHT-CCSEEEEEEEEEC
T ss_pred CCeEEEEECCCChHHhcCCCCCCCEEEEECCEEC-----CCCCHHHHHHHHHh-CCCeEEEEEeccC
Confidence 45789999999999999 9999999999999999 666 888877764 5779999999976
No 183
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.47 E-value=1.8e-07 Score=79.80 Aligned_cols=59 Identities=31% Similarity=0.354 Sum_probs=50.4
Q ss_pred ceeecccCCCChhhhC-CCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcC---CCCcEEEEEEeC
Q 040736 213 GVLVPEVRALSAASRD-GLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKS---PKRNVLLKVARG 274 (448)
Q Consensus 213 gvvV~~V~~gSpA~~A-GL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~---~g~~V~l~V~R~ 274 (448)
.++|.+|.++|||+++ ||++||+|++|||+++.+ .+++++.+.++.. .+++++++|.|.
T Consensus 44 ~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~---~~~~~~~~~l~~~~~~~g~~v~l~v~r~ 106 (118)
T 1v6b_A 44 KVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTD---YTLAEAEAALQKAWNQGGDWIDLVVAVC 106 (118)
T ss_dssp SEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTT---CBHHHHHHHHHHHHHHTCSEEEEEEECC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHHhhhcCCCeEEEEEEeC
Confidence 3789999999999999 999999999999999932 3588888888653 478899999984
No 184
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=98.47 E-value=2.3e-07 Score=84.52 Aligned_cols=59 Identities=25% Similarity=0.378 Sum_probs=52.1
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeC
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARG 274 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~ 274 (448)
.+++|..|.++|||+++| |++||+|++|||+++.+ .+++++.+.++. .+.+++++|.|+
T Consensus 111 ~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~---~~~~~~~~~l~~-~g~~v~L~V~R~ 170 (170)
T 3egg_C 111 LGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVG---VTQSFAASVLRN-TKGRVRFMIGRE 170 (170)
T ss_dssp BEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTT---BCHHHHHHHHHH-CCSEEEEEEEEC
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCEEEEEEEeC
Confidence 467899999999999999 99999999999999943 577888888886 667899999985
No 185
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.44 E-value=1.3e-07 Score=96.75 Aligned_cols=80 Identities=23% Similarity=0.302 Sum_probs=54.0
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCH--HHHHHHHHcC-CCCcEEEEEEeCCEEEEEEEeeccc
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVV--SELVNAIKKS-PKRNVLLKVARGEQQFEIGVTPDEN 287 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~--~dl~~~L~~~-~g~~V~l~V~R~G~~~~l~v~p~~~ 287 (448)
++++|.+|.++|||+++| |++||+|++|||+++ .+| +++.+.++.. ++.++++++.|++...++++...
T Consensus 232 ~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v-----~~~~~~~~~~~l~~~~~~~~v~l~v~r~~~~~~v~l~~~-- 304 (388)
T 3suz_A 232 PTVILANMMNGGPAARSGKLSIGDQIMSINGTSL-----VGLPLATCQGIIKGLKNQTQVKLNIVSCPPVTTVLIKRP-- 304 (388)
T ss_dssp CCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEEC-----SSCCSTTHHHHTTTCTTCSCEEEEEEECCSCC---------
T ss_pred CCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEc-----cCCCHHHHHHHHHhccCCCccccccccccccceeeEeec--
Confidence 467999999999999999 999999999999999 555 6777778764 56779999999987777666432
Q ss_pred CCCCceEEEEec
Q 040736 288 YDGTGKIGVQLS 299 (448)
Q Consensus 288 ~~~~~~lGV~~~ 299 (448)
+..+.+|+.+.
T Consensus 305 -~~~~~lG~~i~ 315 (388)
T 3suz_A 305 -DLKYQLGFSVQ 315 (388)
T ss_dssp ------------
T ss_pred -CCCCccceEEe
Confidence 22345676543
No 186
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.40 E-value=2.5e-07 Score=94.91 Aligned_cols=61 Identities=28% Similarity=0.367 Sum_probs=54.8
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHc-CCCCcEEEEEEeCC
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKK-SPKRNVLLKVARGE 275 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~-~~g~~V~l~V~R~G 275 (448)
.|++|.+|.+||||++|||++||+|++|||+++.+ .+++++.+.++. .+|+++++++.|++
T Consensus 31 ~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~---~~~~e~~~~l~~~~~g~~v~l~v~r~~ 92 (391)
T 3tsz_A 31 VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTN---IIREEAVLFLLDLPKGEEVTILAQKKK 92 (391)
T ss_dssp TEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTT---CCHHHHHHHHHHSCTTSEEEEEEEECH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCC---CCHHHHHHHHHhhcCCCeEEEEEeeCC
Confidence 57899999999999999999999999999999932 459999999987 68899999999975
No 187
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.40 E-value=1.3e-08 Score=96.37 Aligned_cols=70 Identities=31% Similarity=0.446 Sum_probs=58.6
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcE-EEEEEeCCEEE--EEEEeec
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNV-LLKVARGEQQF--EIGVTPD 285 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V-~l~V~R~G~~~--~l~v~p~ 285 (448)
.|++|..|.++|||+++||++||+|++|||+++.. .+++|+.+.++.. ++++ .++|.|+|+.. ++++++.
T Consensus 33 ~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~---~s~~dl~~~l~~~-g~~v~~l~V~R~g~~~~~~v~v~p~ 105 (216)
T 2krg_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEG---KQHGDVVSAIRAG-GDETKLLVVDRETDEFFKKCRVIPS 105 (216)
T ss_dssp CSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTT---CCTHHHHHHHHHH-CSEEEEEECCHHHHHHHHHHTCCCC
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCC---CCHHHHHHHHHhc-CCeEEEEEEEECCEEEEEEEEEEEe
Confidence 37899999999999999999999999999999921 2899999888765 7788 99999988765 5555554
No 188
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=98.38 E-value=5e-07 Score=96.07 Aligned_cols=74 Identities=24% Similarity=0.231 Sum_probs=59.0
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCC-----CCHHHHHHHHHc-CCCCcEEEEEEeCCEEEEEEEeec
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGP-----NVVSELVNAIKK-SPKRNVLLKVARGEQQFEIGVTPD 285 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~-----~s~~dl~~~L~~-~~g~~V~l~V~R~G~~~~l~v~p~ 285 (448)
.|++|.+|.++|||+++ |++||+|+++||++|.+.++ .+..++...+.. .+|++++++|.|+|+.++++++..
T Consensus 277 ~Gv~V~~V~~~spA~~a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~~~v~Vtl~ 355 (539)
T 4fln_A 277 EGVLVRRVEPTSDASKV-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHKKVQVVLR 355 (539)
T ss_dssp BCEEEEEECTTSGGGGT-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEEEEEEEECB
T ss_pred CceeeecccCCChHHhC-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEEEEEEEEEc
Confidence 58999999999999987 99999999999999932111 111235556654 679999999999999999998876
Q ss_pred c
Q 040736 286 E 286 (448)
Q Consensus 286 ~ 286 (448)
.
T Consensus 356 ~ 356 (539)
T 4fln_A 356 P 356 (539)
T ss_dssp C
T ss_pred c
Confidence 4
No 189
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.37 E-value=5.6e-07 Score=76.54 Aligned_cols=62 Identities=21% Similarity=0.233 Sum_probs=50.2
Q ss_pred ceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcC-CCCcEEEEEEeCCEEEE
Q 040736 213 GVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKS-PKRNVLLKVARGEQQFE 279 (448)
Q Consensus 213 gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~-~g~~V~l~V~R~G~~~~ 279 (448)
|..|..|.+ +++.+||++||+|++|||+++.+ .+++|+.+.++.. .|++++++|.|+|....
T Consensus 35 g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~---~~h~evv~~lk~~~~G~~v~L~V~R~g~~~p 97 (113)
T 3soe_A 35 GQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQN---LTHLQVVEVLKQFPVGADVPLLILRGGPPSP 97 (113)
T ss_dssp EEEEEEESC--GGGSTTCCTTCEEEEETTEECTT---SCHHHHHHHHHHSCTTCEEEEEEEESSCC--
T ss_pred CcEEEEecC--hHHhCCCCCCCEEEEECCEECCC---CCHHHHHHHHHcCCCCCEEEEEEEECCccCc
Confidence 455777766 68899999999999999999932 4778999999875 48899999999986443
No 190
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.30 E-value=5.7e-07 Score=83.16 Aligned_cols=60 Identities=20% Similarity=0.239 Sum_probs=50.1
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCC
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGE 275 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G 275 (448)
.|++|.+|.++|||+++| |++||+|++|||+++.+ .+.+++.+.++. .++++.++|.|..
T Consensus 136 ~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~---~~~~~~~~~l~~-~~~~v~L~V~R~~ 196 (206)
T 3r0h_A 136 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEG---LPFQVCYALFKG-ANGKVSMEVTRPK 196 (206)
T ss_dssp SCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTT---CCHHHHHHHHHT-CCSEEEEEEEEEC
T ss_pred ceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCC---CCHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 578999999999999999 99999999999999921 245788888875 5678999998843
No 191
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.26 E-value=1.2e-07 Score=98.99 Aligned_cols=65 Identities=28% Similarity=0.471 Sum_probs=0.0
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEEEEEEE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQFEIGV 282 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~~~l~v 282 (448)
.|++|.+|.++|||+++||++||+|++|||+++ .+++|+.+.++..++ .+.++|.|+|+.+++++
T Consensus 383 ~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v-----~~~~~l~~~l~~~~~-~v~l~v~R~g~~~~~~l 447 (448)
T 1ky9_A 383 QGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAV-----KNIAELRKVLDSKPS-VLALNIQRGDSTIYLLM 447 (448)
T ss_dssp -----------------------------------------------------------------------
T ss_pred CeEEEEEecCCCHHHHcCCCCCCEEEEECCEEC-----CCHHHHHHHHHcCCC-eEEEEEEECCEEEEEEe
Confidence 578899999999999999999999999999999 889999998886555 89999999998776654
No 192
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=97.56 E-value=1.3e-07 Score=80.04 Aligned_cols=57 Identities=28% Similarity=0.460 Sum_probs=45.2
Q ss_pred CceeecccCCCChhhh-CCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEE
Q 040736 212 PGVLVPEVRALSAASR-DGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVA 272 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~-AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~ 272 (448)
.+++|.+|.++|||++ +||++||+|++|||+++.+ .+++++.+.++.. +++++++|.
T Consensus 53 ~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~---~~~~~~~~~l~~~-~~~v~l~V~ 110 (112)
T 2lob_A 53 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRD---TKHKEAVTILSQQ-RGEIEFEVV 110 (112)
Confidence 3678999999999999 9999999999999999932 4577777777643 344666654
No 193
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.24 E-value=4.7e-07 Score=93.20 Aligned_cols=57 Identities=21% Similarity=0.227 Sum_probs=48.7
Q ss_pred eeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEE
Q 040736 214 VLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQ 277 (448)
Q Consensus 214 vvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~ 277 (448)
++|.+|.++|||++|||++||+|++|||+++ .+++ +.+.++. +++++++++.|+|+.
T Consensus 92 ~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v-----~~~~-~~~~l~~-~g~~v~l~v~R~g~~ 148 (403)
T 3k50_A 92 ALISYVVPGSPAEEAGLQRGHWIMMMNGDYI-----TKKV-ESELLQG-STRQLQIGVYKEVVG 148 (403)
T ss_dssp EEEEEECTTSHHHHTTCCTTCEEEEETTBCB-----CTTT-GGGGTSC-SCEEEEEEEEEEEC-
T ss_pred EEEEEeCCCChHHHcCCCCCCEEEEECCEEc-----cchh-HHHHhhC-CCCEEEEEEEeCCcc
Confidence 6899999999999999999999999999999 5553 5556665 889999999998753
No 194
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.23 E-value=1e-06 Score=92.12 Aligned_cols=62 Identities=27% Similarity=0.366 Sum_probs=54.6
Q ss_pred CceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHc-CCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKK-SPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~-~~g~~V~l~V~R~G~ 276 (448)
.|++|..|.+||||+++||++||+|++|||+++.+ .+.+++.+.++. .+|++++++|.|+++
T Consensus 23 ~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~---~t~~e~~~~L~~~~~g~~v~L~V~r~g~ 85 (468)
T 3shw_A 23 VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTN---IIREEAVLFLLDLPKGEEVTILAQKKKD 85 (468)
T ss_dssp TEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTT---CCHHHHHHHHHHSCTTSEEEEEEEECHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCC---CCHHHHHHHHHhcCCCCEEEEEEEECCc
Confidence 57899999999999999999999999999999932 358999999987 478899999999653
No 195
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.22 E-value=1.2e-06 Score=85.06 Aligned_cols=61 Identities=34% Similarity=0.508 Sum_probs=52.8
Q ss_pred CceeecccCCCChhhh-CCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 212 PGVLVPEVRALSAASR-DGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~-AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
.+++|.+|.++|||++ +||++||+|++|||+++.+ .+++++.+.++.. +++++++|.|.++
T Consensus 103 ~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~---~t~~e~v~~l~~~-g~~V~L~V~R~~~ 164 (263)
T 1z87_A 103 MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSS---ATHDEAVQALKKT-GKEVVLEVKYMKE 164 (263)
T ss_dssp EEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTT---SCHHHHHHHHHHC-CSCCCEEEECCSS
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCC---cCHHHHHHHHhcC-CCeEEEEEEeCcc
Confidence 4689999999999999 7999999999999999932 4578888888865 6779999999765
No 196
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.92 E-value=9.6e-06 Score=91.98 Aligned_cols=67 Identities=12% Similarity=0.152 Sum_probs=58.5
Q ss_pred CceeecccCCC--------ChhhhCC--CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCC-EEEEE
Q 040736 212 PGVLVPEVRAL--------SAASRDG--LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGE-QQFEI 280 (448)
Q Consensus 212 ~gvvV~~V~~g--------SpA~~AG--L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G-~~~~l 280 (448)
.+++|.+|.++ |||+++| |+ ||+|++|||+++ .++.++.+.++..+|++++++|.|++ +.+++
T Consensus 748 ~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~-----~~~~~~~~~~~~~~g~~v~l~v~r~~~~~~~~ 821 (1045)
T 1k32_A 748 DHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETV-----GAGSNIYRVLSEKAGTSARIRLSGKGGDKRDL 821 (1045)
T ss_dssp TEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEEC-----BTTBCHHHHHHTTTTSEEEEEEECSSSCEEEE
T ss_pred CEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEc-----cchhhHHHhhcCCCCCEEEEEEECCCCceEEE
Confidence 45788888887 9999999 99 999999999999 66678888898888999999999987 56678
Q ss_pred EEee
Q 040736 281 GVTP 284 (448)
Q Consensus 281 ~v~p 284 (448)
++++
T Consensus 822 ~~~~ 825 (1045)
T 1k32_A 822 MIDI 825 (1045)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8776
No 197
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=97.91 E-value=1.1e-06 Score=78.84 Aligned_cols=55 Identities=18% Similarity=0.281 Sum_probs=41.2
Q ss_pred eecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEEEEEEEee
Q 040736 215 LVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQFEIGVTP 284 (448)
Q Consensus 215 vV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~~~l~v~p 284 (448)
+|.+|.++|||+++||++||+|++|||+++ .++. ++++.+++.|+|+..+++++|
T Consensus 110 ~v~~v~~~s~a~~aGl~~GD~I~~ing~~v-----~~~~----------~~~v~~~v~r~g~~~~l~v~~ 164 (166)
T 1w9e_A 110 KITSIVKDSSAARNGLLTEHNICEINGQNV-----IGLK----------DSQIADILSTSGTVVTITIMP 164 (166)
T ss_dssp EEEEECTTSHHHHTTCCSSEEEEEETTEEC-----TTCC----------HHHHHHHHHHSCSEEEEEEEE
T ss_pred EEEEEccCCHHHHcCCCCCCEEEEECCEEC-----CCCC----------hHHHHHHHhhCCCEEEEEEEE
Confidence 688999999999999999999999999999 4441 223333445666666666555
No 198
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=97.80 E-value=6e-05 Score=61.98 Aligned_cols=57 Identities=14% Similarity=0.196 Sum_probs=48.2
Q ss_pred eeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCC-CCcEEEEEEe
Q 040736 214 VLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSP-KRNVLLKVAR 273 (448)
Q Consensus 214 vvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~-g~~V~l~V~R 273 (448)
.+|..+.++|+|++.| |++||.|++|||+.+.. .+-+|+.+.|++.+ +.++++++.+
T Consensus 30 ~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g---~~h~evv~lLk~~~~g~~~~L~lv~ 88 (95)
T 3gge_A 30 AFIKRIKDGGVIDSVKTICVGDHIESINGENIVG---WRHYDVAKKLKELKKEELFTMKLIE 88 (95)
T ss_dssp CEEEEECTTSHHHHCTTCCTTCEEEEETTEECTT---CCHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred EEEEEEcCCChHHhcCCCCCCCEEEEECCEEccC---CCHHHHHHHHHhCCCCCEEEEEEEC
Confidence 5789999999999977 89999999999999943 56789999998854 6778887765
No 199
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=97.77 E-value=3.2e-05 Score=85.12 Aligned_cols=62 Identities=31% Similarity=0.333 Sum_probs=51.6
Q ss_pred CCceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCE
Q 040736 211 FPGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQ 276 (448)
Q Consensus 211 ~~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~ 276 (448)
..|++|.+|.++|||+++| |++||+|++|||+++.+ .+..++.+.++. .+++++++|.|++.
T Consensus 88 ~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~---~~~~~~~~~l~~-~g~~v~l~v~R~~~ 150 (721)
T 2xkx_A 88 DPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVRE---VTHSAAVEALKE-AGSIVRLYVMRRKP 150 (721)
T ss_pred CCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCC---CCHHHHHHHhhc-cccccceEEEeccc
Confidence 4578999999999999999 99999999999999932 234667766654 57889999999874
No 200
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=97.67 E-value=5e-05 Score=83.61 Aligned_cols=60 Identities=27% Similarity=0.334 Sum_probs=51.9
Q ss_pred CceeecccCCCChhhhCC-CCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCC
Q 040736 212 PGVLVPEVRALSAASRDG-LFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGE 275 (448)
Q Consensus 212 ~gvvV~~V~~gSpA~~AG-L~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G 275 (448)
.|++|.+|.++|||+++| |++||+|++|||+++.+ .+++|+.+.++.. +++++++|.|+.
T Consensus 331 ~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~---~~~~e~~~~l~~~-~~~v~L~v~r~~ 391 (721)
T 2xkx_A 331 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRN---ASHEQAAIALKNA-GQTVTIIAQYKP 391 (721)
T ss_pred CCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCC---CCHHHHHHHHHhc-CCeEEEEEEeCc
Confidence 578999999999999999 99999999999999932 3589999999864 677999998864
No 201
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.24 E-value=0.00033 Score=74.46 Aligned_cols=62 Identities=13% Similarity=0.109 Sum_probs=53.5
Q ss_pred CCceeecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeCCEEE
Q 040736 211 FPGVLVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARGEQQF 278 (448)
Q Consensus 211 ~~gvvV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~G~~~ 278 (448)
..+++|.+|.++++|+.+|+++||+|++|||++| +|.+|+.+.+++..++.+.+... +++..
T Consensus 414 ~~gVvvs~V~~~s~a~~~g~~~gdiI~~vNg~~V-----~s~~~l~~~l~~~k~~~l~~~~~-~~~~i 475 (539)
T 4fln_A 414 EQIVILSQVLANEVNIGYEDMNNQQVLKFNGIPI-----RNIHHLAHLIDMCKDKYLVFEFE-DNYVA 475 (539)
T ss_dssp CCCEEEEEECCCGGGTTCSSCCSEEEEEETTEEC-----CSHHHHHHHHHTCCSSEEEEEET-TSCEE
T ss_pred ceEEEEEEecCCchhhhcCCCCCCEEEeECCEEc-----CCHHHHHHHHHHcCCCeEEEEEC-CCEEE
Confidence 3579999999999999999999999999999999 99999999999887777776644 34443
No 202
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=97.21 E-value=5e-05 Score=77.61 Aligned_cols=56 Identities=18% Similarity=0.302 Sum_probs=0.0
Q ss_pred eecccCCCChhhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEeC
Q 040736 215 LVPEVRALSAASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVARG 274 (448)
Q Consensus 215 vV~~V~~gSpA~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R~ 274 (448)
+|.+|.++|||+++||++||+|++|||+++.+ .+++++.+.++. .++.+++++.+.
T Consensus 318 ~I~~V~~gs~A~~aGL~~GD~Il~VNg~~v~~---~s~~~~~~~l~~-~~~~v~L~V~p~ 373 (388)
T 3suz_A 318 IICSLMRGGIAERGGVRVGHRIIEINGQSVVA---TAHEKIVQALSN-SVGEIHMKTMPA 373 (388)
T ss_dssp ------------------------------------------------------------
T ss_pred EEEEeecCCHHHHcCCCCCCEEEEECCEECCC---CCHHHHHHHHHh-CCCeEEEEEEec
Confidence 78899999999999999999999999999932 356788877765 445667766543
No 203
>2di4_A Zinc protease, cell division protein FTSH homolog; metalloproteinase, hexamer-ring, hydrolase; 2.79A {Aquifex aeolicus} SCOP: a.269.1.1
Probab=94.35 E-value=0.0046 Score=58.95 Aligned_cols=25 Identities=32% Similarity=0.527 Sum_probs=20.6
Q ss_pred HHHHHhhHHHHHHHHhC--CccceEee
Q 040736 99 IIIVHESGHFLAAYLQG--IHVSKFAV 123 (448)
Q Consensus 99 ~i~vHE~gH~~~A~~~g--v~V~~fsi 123 (448)
.+..||.||+++|.++. .+|++.+|
T Consensus 18 ~vAyHEAGHAlva~~l~~~~pV~KVTI 44 (238)
T 2di4_A 18 KIAIHEAGHALMGLVSDDDDKVHKISI 44 (238)
T ss_dssp HHHHHHHHHHHHHHHCSSCCCCCCEEC
T ss_pred HHHHHHHHHHHHHHHcCCCCceeEEEE
Confidence 35689999999999987 78888544
No 204
>2jsd_A Matrix metalloproteinase-20; MMP-NNGH, structural genomics, structural proteomics in europe, spine, spine-2, spine2-complexes, hydrolase; HET: NGH; NMR {Homo sapiens}
Probab=54.61 E-value=4.6 Score=35.15 Aligned_cols=11 Identities=45% Similarity=0.694 Sum_probs=9.3
Q ss_pred HHHHHhhHHHH
Q 040736 99 IIIVHESGHFL 109 (448)
Q Consensus 99 ~i~vHE~gH~~ 109 (448)
.+++||+||++
T Consensus 110 ~v~~HEiGHaL 120 (160)
T 2jsd_A 110 TVAAHEFGHAL 120 (160)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHhHhhh
Confidence 47899999985
No 205
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=51.96 E-value=25 Score=37.40 Aligned_cols=57 Identities=23% Similarity=0.271 Sum_probs=33.3
Q ss_pred CCCCCCEEEEECCeecCCC--------CCCCHHHHHHHHHc-----------CCCCcEEEEEEe-CCEEEEEEEeec
Q 040736 229 GLFPGDVILSVNGNEFPKT--------GPNVVSELVNAIKK-----------SPKRNVLLKVAR-GEQQFEIGVTPD 285 (448)
Q Consensus 229 GL~~GDvIlsInG~~V~~~--------~~~s~~dl~~~L~~-----------~~g~~V~l~V~R-~G~~~~l~v~p~ 285 (448)
+++.||+|++|||+++.+. +.+...+-..+++. -+...+++++.| +|+.++++++..
T Consensus 109 ~I~vGdEIlsING~pv~e~Lek~~~~~Gsn~~a~~~~Al~~Lt~R~~~l~~~~p~~~~tlk~~~~~G~~~~v~~pW~ 185 (583)
T 3dor_A 109 EIRVGDELLEVDGAPVQDVLATLYGSNHKGTAAEESAALRTLFSRMASLGHKVPSGRTTLKIRRPFGTTREVRVKWR 185 (583)
T ss_dssp SSCTTCEEEEETTEEHHHHHHTTSCTTCCCCHHHHHHHHHHHTEEEGGGTCCCCCSEEEEEEECTTSCEEEEEEECE
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHhcCCCcHHHHHHHHHHHhhhHHhhccCCCCCceEEEEECCCCcEEEEEeeeE
Confidence 7999999999999987211 00111111122211 133478888865 578888776543
No 206
>2xs4_A Karilysin protease; hydrolase, bacterial MMP, virulence factor, metalloprotease, dependent, peptidase; 1.70A {Tannerella forsythia} PDB: 2xs3_A
Probab=51.24 E-value=6.6 Score=34.46 Aligned_cols=11 Identities=45% Similarity=0.854 Sum_probs=9.4
Q ss_pred HHHHHhhHHHH
Q 040736 99 IIIVHESGHFL 109 (448)
Q Consensus 99 ~i~vHE~gH~~ 109 (448)
.+++||+||.+
T Consensus 117 ~v~~HEiGHaL 127 (167)
T 2xs4_A 117 TVAAHEIGHLL 127 (167)
T ss_dssp HHHHHHHHHHH
T ss_pred hhHHHHHHHhh
Confidence 57899999985
No 207
>2ovx_A Matrix metalloproteinase-9 (EC 3.4.24.35) (MMP-9) type IV collagenase) (92 kDa gelatinase)...; S1-prime pocket, hydrolase-hydrola inhibitor complex; HET: 4MR; 2.00A {Homo sapiens} SCOP: d.92.1.11 PDB: 2ovz_A* 2ow0_A* 2ow1_A* 2ow2_A* 1gkd_A* 1gkc_A*
Probab=49.85 E-value=6 Score=34.59 Aligned_cols=11 Identities=36% Similarity=0.739 Sum_probs=9.3
Q ss_pred HHHHHhhHHHH
Q 040736 99 IIIVHESGHFL 109 (448)
Q Consensus 99 ~i~vHE~gH~~ 109 (448)
.+++||+||++
T Consensus 113 ~va~HEiGHaL 123 (159)
T 2ovx_A 113 LVAAHQFGHAL 123 (159)
T ss_dssp HHHHHHHHHHT
T ss_pred hhhhhhhhhhh
Confidence 47899999984
No 208
>1hy7_A Stromelysin-1, MMP-3; mixed alpha beta structure, zinc protease, inhibited, hydrol; HET: MBS; 1.50A {Homo sapiens} SCOP: d.92.1.11 PDB: 1biw_A* 1bm6_A* 1bqo_A* 1b3d_A* 1cqr_A 1d5j_A* 1d7x_A* 1d8f_A* 1d8m_A* 1g05_A* 1g49_A* 1c3i_A* 1sln_A* 1uea_A 2srt_A* 1ums_A* 1umt_A* 2d1o_A* 3oho_A* 1ciz_A* ...
Probab=49.51 E-value=6.1 Score=34.99 Aligned_cols=11 Identities=45% Similarity=0.812 Sum_probs=9.4
Q ss_pred HHHHHhhHHHH
Q 040736 99 IIIVHESGHFL 109 (448)
Q Consensus 99 ~i~vHE~gH~~ 109 (448)
.+++||+||++
T Consensus 115 ~v~~HEiGHaL 125 (173)
T 1hy7_A 115 LVAAHEIGHSL 125 (173)
T ss_dssp HHHHHHHHHHH
T ss_pred hhHHHHHHHhh
Confidence 46899999985
No 209
>1cge_A Fibroblast collagenase; hydrolase (metalloprotease); 1.90A {Homo sapiens} SCOP: d.92.1.11 PDB: 2j0t_A 1ayk_A 1hfc_A* 2ayk_A 2tcl_A* 3ayk_A* 4ayk_A* 1cgl_A* 1cgf_A 966c_A* 3shi_A
Probab=46.79 E-value=6 Score=34.91 Aligned_cols=11 Identities=45% Similarity=0.646 Sum_probs=9.2
Q ss_pred HHHHHhhHHHH
Q 040736 99 IIIVHESGHFL 109 (448)
Q Consensus 99 ~i~vHE~gH~~ 109 (448)
.+++||+||++
T Consensus 113 ~v~~HEiGHaL 123 (168)
T 1cge_A 113 RVAAHELGHSL 123 (168)
T ss_dssp HHHHHHHHHHT
T ss_pred hhhhhHhHhhh
Confidence 56899999984
No 210
>1hv5_A Stromelysin 3; inhibition, phosphinic inhibitor, hydrolase; HET: CPS RXP; 2.60A {Mus musculus} SCOP: d.92.1.11
Probab=43.20 E-value=7.3 Score=34.17 Aligned_cols=11 Identities=45% Similarity=0.727 Sum_probs=9.3
Q ss_pred HHHHHhhHHHH
Q 040736 99 IIIVHESGHFL 109 (448)
Q Consensus 99 ~i~vHE~gH~~ 109 (448)
.+++||+||.+
T Consensus 115 ~v~~HEiGHaL 125 (165)
T 1hv5_A 115 QVAAHEFGHVL 125 (165)
T ss_dssp HHHHHHHHHHT
T ss_pred hhHHHHhHhhh
Confidence 57899999984
No 211
>1i76_A MMP-8;, neutrophil collagenase; hydrolase, complex (metalloprotease/inhibitor); HET: BSI; 1.20A {Homo sapiens} SCOP: d.92.1.11 PDB: 1i73_A* 1jao_A* 1jap_A 1jaq_A* 1jj9_A* 1mmb_A* 1zp5_A* 1zs0_A* 1zvx_A* 3dng_A* 3dpe_A* 3dpf_A* 1kbc_A* 1jan_A* 1bzs_A* 1mnc_A* 2oy2_A 1a86_A* 1jh1_A* 1a85_A ...
Probab=41.25 E-value=9.8 Score=33.33 Aligned_cols=11 Identities=45% Similarity=0.782 Sum_probs=9.3
Q ss_pred HHHHHhhHHHH
Q 040736 99 IIIVHESGHFL 109 (448)
Q Consensus 99 ~i~vHE~gH~~ 109 (448)
.+++||+||.+
T Consensus 114 ~v~~HE~GHal 124 (163)
T 1i76_A 114 LVAAHEFGHSL 124 (163)
T ss_dssp HHHHHHHHHHH
T ss_pred hhhHHHhhhhh
Confidence 46799999985
No 212
>1slm_A Stromelysin-1; hydrolase, metalloprotease, fibroblast, collagen degradation; 1.90A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11
Probab=35.98 E-value=13 Score=35.25 Aligned_cols=11 Identities=45% Similarity=0.812 Sum_probs=9.4
Q ss_pred HHHHHhhHHHH
Q 040736 99 IIIVHESGHFL 109 (448)
Q Consensus 99 ~i~vHE~gH~~ 109 (448)
.+++||+||++
T Consensus 197 ~va~HEiGHaL 207 (255)
T 1slm_A 197 LVAAHEIGHSL 207 (255)
T ss_dssp HHHHHHHHHHT
T ss_pred hhhHHHHHHHh
Confidence 57899999985
No 213
>1c7k_A NCNP, zinc endoprotease; alpha and beta protein, metalloproteinase, hydrolase; 1.00A {Streptomyces caespitosus} SCOP: d.92.1.1 PDB: 1kuh_A
Probab=35.85 E-value=17 Score=31.15 Aligned_cols=11 Identities=45% Similarity=0.848 Sum_probs=9.3
Q ss_pred HHHHHhhHHHH
Q 040736 99 IIIVHESGHFL 109 (448)
Q Consensus 99 ~i~vHE~gH~~ 109 (448)
.++.||+||.+
T Consensus 79 ~v~aHE~GH~L 89 (132)
T 1c7k_A 79 RVTAHETGHVL 89 (132)
T ss_dssp HHHHHHHHHHH
T ss_pred eEEeeeehhcc
Confidence 47899999985
No 214
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=33.87 E-value=19 Score=29.62 Aligned_cols=49 Identities=18% Similarity=0.318 Sum_probs=31.7
Q ss_pred CCCCcEEEEEEeCCEEEEEEEeecccCCCCceEEEEecC------CcceeeeecCCHHH
Q 040736 262 SPKRNVLLKVARGEQQFEIGVTPDENYDGTGKIGVQLSP------NVKISKVLPKNLLE 314 (448)
Q Consensus 262 ~~g~~V~l~V~R~G~~~~l~v~p~~~~~~~~~lGV~~~~------~~~~~~~~~~~~~~ 314 (448)
.+|+++.+++.|+|+.++++++.... ..+|+.+.. ...+..+.+.++.+
T Consensus 6 ~~g~~v~l~v~R~g~~~~v~v~~~~~----~~lG~~~~~~~~~~~gv~V~~V~~~spA~ 60 (128)
T 1uf1_A 6 SGDRRSTLHLLQGGDEKKVNLVLGDG----RSLGLTIRGGAEYGLGIYITGVDPGSEAE 60 (128)
T ss_dssp STTTSCCSCCCCCSSEEEEEEECCSS----CCCCEEEECCTTTTCCCEEEEECTTCHHH
T ss_pred CCCCEEEEEEEeCCcEEEEEEEECCC----CccCEEEECcccCCCCEEEEEECCCCHHH
Confidence 46788999999999998888886431 346776533 22344455555543
No 215
>1y93_A Macrophage metalloelastase; matrix metalloproteinase, MMP12, complex (elastase inhibitor), acetohydroxamic acid, hydrola; 1.03A {Homo sapiens} SCOP: d.92.1.11 PDB: 1rmz_A 1ycm_A* 1z3j_A* 2hu6_A* 2oxu_A 2oxw_A 2oxz_A 3lik_A* 3lil_A* 3lir_A* 3ljg_A* 1os9_A 1os2_A 3f17_A* 3ehy_A* 3ehx_A* 3f15_A* 3f16_A* 3f18_A* 3f19_A* ...
Probab=33.41 E-value=16 Score=31.90 Aligned_cols=11 Identities=55% Similarity=0.800 Sum_probs=9.0
Q ss_pred HHHHHhhHHHH
Q 040736 99 IIIVHESGHFL 109 (448)
Q Consensus 99 ~i~vHE~gH~~ 109 (448)
.+.+||+||.+
T Consensus 110 ~~~~HE~GH~l 120 (159)
T 1y93_A 110 LTAVHEIGHSL 120 (159)
T ss_dssp HHHHHHHHHHT
T ss_pred hhhhhhhhhhh
Confidence 46799999974
No 216
>3ayu_A 72 kDa type IV collagenase; protease, hydrolase-hydrolase inhibitor complex; 2.00A {Homo sapiens} PDB: 1qib_A 1hov_A*
Probab=32.60 E-value=14 Score=32.60 Aligned_cols=11 Identities=27% Similarity=0.652 Sum_probs=9.2
Q ss_pred HHHHHhhHHHH
Q 040736 99 IIIVHESGHFL 109 (448)
Q Consensus 99 ~i~vHE~gH~~ 109 (448)
.+++||+||.+
T Consensus 116 ~~~~HE~gH~l 126 (167)
T 3ayu_A 116 LVAAHAFGHAM 126 (167)
T ss_dssp HHHHHHHHHHT
T ss_pred eehhhhhHHhc
Confidence 46899999984
No 217
>1rm8_A MMP-16, matrix metalloproteinase-16, MT3-MMP; membrane type - matrix metalloproteinase, batimastat, hydroxamate inhibitor, protease, hydrolase; HET: BAT; 1.80A {Homo sapiens} SCOP: d.92.1.11
Probab=32.58 E-value=20 Score=31.45 Aligned_cols=11 Identities=55% Similarity=0.918 Sum_probs=9.3
Q ss_pred HHHHHhhHHHH
Q 040736 99 IIIVHESGHFL 109 (448)
Q Consensus 99 ~i~vHE~gH~~ 109 (448)
.+.+||+||.+
T Consensus 119 ~~~~he~gh~l 129 (169)
T 1rm8_A 119 LVAVHELGHAL 129 (169)
T ss_dssp HHHHHHHHHHH
T ss_pred eehhhhhhhhc
Confidence 46799999986
No 218
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=32.27 E-value=7 Score=40.55 Aligned_cols=24 Identities=25% Similarity=0.421 Sum_probs=18.6
Q ss_pred HHHHhhHHHHHHHHhC--CccceEee
Q 040736 100 IIVHESGHFLAAYLQG--IHVSKFAV 123 (448)
Q Consensus 100 i~vHE~gH~~~A~~~g--v~V~~fsi 123 (448)
+..||.||++++..+. .++++.++
T Consensus 275 ~a~~e~G~a~~~~~l~~~~~~~~~~i 300 (476)
T 2ce7_A 275 IAYHEAGHAVVSTVVPNGEPVHRISI 300 (476)
T ss_dssp HHHHHHHHHHHHHHSTTCCCCCEEEC
T ss_pred hHHHHhhhHHHhhccCCccccceeee
Confidence 4589999999999874 66777444
No 219
>2y6d_A Matrilysin; hydrolase; HET: TQJ; 1.60A {Homo sapiens} PDB: 2ddy_A* 1mmq_A* 1mmp_A* 1mmr_A* 2y6c_A*
Probab=32.04 E-value=20 Score=31.70 Aligned_cols=11 Identities=45% Similarity=0.576 Sum_probs=9.2
Q ss_pred HHHHHhhHHHH
Q 040736 99 IIIVHESGHFL 109 (448)
Q Consensus 99 ~i~vHE~gH~~ 109 (448)
.+.+||+||.+
T Consensus 117 ~~~~HE~gH~l 127 (174)
T 2y6d_A 117 YAATHELGHSL 127 (174)
T ss_dssp HHHHHHHHHHH
T ss_pred ehhhHHhHhhh
Confidence 46799999985
No 220
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=29.31 E-value=21 Score=28.94 Aligned_cols=11 Identities=27% Similarity=0.607 Sum_probs=9.1
Q ss_pred HHHHHhhHHHH
Q 040736 99 IIIVHESGHFL 109 (448)
Q Consensus 99 ~i~vHE~gH~~ 109 (448)
.|+.||+||.-
T Consensus 85 aVlaHElgH~~ 95 (107)
T 3cqb_A 85 AVLAHEVSHIA 95 (107)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 47899999974
No 221
>2j3t_D Trafficking protein particle complex subunit 4; trapp, palmitate, transport, lipoprotein, ER-golgi transport apparatus, protein transport; HET: PLM; 2.4A {Homo sapiens} PDB: 2zmv_A 2jsn_A
Probab=28.62 E-value=38 Score=31.38 Aligned_cols=49 Identities=20% Similarity=0.346 Sum_probs=35.7
Q ss_pred hhhCCCCCCCEEEEECCeecCCCCCCCHHHHHHHHHcCCCCcEEEEEEe
Q 040736 225 ASRDGLFPGDVILSVNGNEFPKTGPNVVSELVNAIKKSPKRNVLLKVAR 273 (448)
Q Consensus 225 A~~AGL~~GDvIlsInG~~V~~~~~~s~~dl~~~L~~~~g~~V~l~V~R 273 (448)
+++.|+..|...+++||.++......+-+++.+.+..+.+.++.+...+
T Consensus 52 ~~~d~~~~~~~~~~~ng~~~~~~~~~d~~~v~~~iigk~N~PLyir~f~ 100 (219)
T 2j3t_D 52 GQRDGIRVGHAVLAINGMDVNGRYTADGKEVLEYLGNPANYPVSIRFGR 100 (219)
T ss_dssp CCCTTCCTTCEEEEETTEECBTTBCTTSSBHHHHTTCGGGCSEEEEEEC
T ss_pred cccCCccccceeeecCCccCCCcccccCceeeeeeecCCCCceEEEecC
Confidence 4567999999999999999954323334567777776667777776554
No 222
>1sat_A Serratia protease; parallel beta helix, parallel beta roll, hydrolase (serine protease); 1.75A {Serratia marcescens} SCOP: b.80.7.1 d.92.1.6 PDB: 1af0_A* 1smp_A 1srp_A
Probab=27.28 E-value=21 Score=36.81 Aligned_cols=12 Identities=42% Similarity=0.556 Sum_probs=10.0
Q ss_pred HHHHHHhhHHHH
Q 040736 98 AIIIVHESGHFL 109 (448)
Q Consensus 98 ~~i~vHE~gH~~ 109 (448)
..+++||+||++
T Consensus 171 ~~va~HEiGHaL 182 (471)
T 1sat_A 171 RQTFTHEIGHAL 182 (471)
T ss_dssp HHHHHHHHHHHH
T ss_pred ceeeeeeccccc
Confidence 367899999986
No 223
>3p1v_A Metallo-endopeptidase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.93A {Bacteroides ovatus atcc 8483} PDB: 4df9_A*
Probab=27.17 E-value=17 Score=36.96 Aligned_cols=13 Identities=38% Similarity=0.659 Sum_probs=10.3
Q ss_pred HHHHHHhhHHHHH
Q 040736 98 AIIIVHESGHFLA 110 (448)
Q Consensus 98 ~~i~vHE~gH~~~ 110 (448)
.-+++||+||.++
T Consensus 288 ~~V~vHE~GHsfg 300 (407)
T 3p1v_A 288 KPVVVHEFGHSFG 300 (407)
T ss_dssp HHHHHHHHHHHTT
T ss_pred cceeeeecccccc
Confidence 3588999999753
No 224
>1g9k_A Serralysin; beta jelly roll, hydrolase; 1.96A {Pseudomonas} SCOP: b.80.7.1 d.92.1.6 PDB: 1o0q_A 1o0t_A 1om6_A 1om7_A 1om8_A 1omj_A 1h71_P
Probab=26.40 E-value=23 Score=36.56 Aligned_cols=11 Identities=45% Similarity=0.682 Sum_probs=9.7
Q ss_pred HHHHHhhHHHH
Q 040736 99 IIIVHESGHFL 109 (448)
Q Consensus 99 ~i~vHE~gH~~ 109 (448)
.+++||+||.+
T Consensus 165 ~va~HEiGHaL 175 (463)
T 1g9k_A 165 QTLTHEIGHTL 175 (463)
T ss_dssp HHHHHHHHHHH
T ss_pred hhhhhhhhhhh
Confidence 67899999986
No 225
>2cki_A Ulilysin; metalloprotease, hydrolase; HET: ARG; 1.7A {Methanosarcina acetivorans} PDB: 2j83_A* 3lum_A* 3lun_A*
Probab=25.20 E-value=21 Score=33.91 Aligned_cols=11 Identities=45% Similarity=0.733 Sum_probs=9.2
Q ss_pred HHHHHhhHHHH
Q 040736 99 IIIVHESGHFL 109 (448)
Q Consensus 99 ~i~vHE~gH~~ 109 (448)
-.++||+||++
T Consensus 164 ~TltHEvGH~L 174 (262)
T 2cki_A 164 RTATHEIGHWL 174 (262)
T ss_dssp HHHHHHHHHHT
T ss_pred chhhhhhhhhh
Confidence 47899999974
No 226
>1k7i_A PROC, secreted protease C; metalloprotease, hydrolase; 1.59A {Erwinia chrysanthemi} SCOP: b.80.7.1 d.92.1.6 PDB: 1k7g_A 1k7q_A 1go8_P 3hbv_P 3hda_P 3hbu_P 1go7_P 3hb2_P
Probab=25.15 E-value=25 Score=36.44 Aligned_cols=12 Identities=42% Similarity=0.556 Sum_probs=10.1
Q ss_pred HHHHHHhhHHHH
Q 040736 98 AIIIVHESGHFL 109 (448)
Q Consensus 98 ~~i~vHE~gH~~ 109 (448)
..+++||+||.+
T Consensus 183 ~~va~HEiGHaL 194 (479)
T 1k7i_A 183 RQTFTHEIGHAL 194 (479)
T ss_dssp HHHHHHHHHHHH
T ss_pred ccccHHHHHHhh
Confidence 367899999986
No 227
>830c_A MMP-13, MMP-13; matrix metalloprotease; HET: RS1; 1.60A {Homo sapiens} SCOP: d.92.1.11 PDB: 456c_A* 1you_A* 4a7b_A* 3tvc_A* 1eub_A* 1xuc_A* 1xud_A* 1xur_A* 2yig_A* 3elm_A* 3i7g_A* 3i7i_A* 3zxh_A* 2ow9_A* 2ozr_A* 3kek_A* 3kej_A* 3kec_A* 2d1n_A* 1fls_A* ...
Probab=24.82 E-value=27 Score=30.80 Aligned_cols=11 Identities=45% Similarity=0.782 Sum_probs=9.1
Q ss_pred HHHHHhhHHHH
Q 040736 99 IIIVHESGHFL 109 (448)
Q Consensus 99 ~i~vHE~gH~~ 109 (448)
.+.+||+||.+
T Consensus 115 ~v~~hE~Gh~l 125 (168)
T 830c_A 115 LVAAHEFGHSL 125 (168)
T ss_dssp HHHHHHHHHHT
T ss_pred hhhhhhhcchh
Confidence 46799999985
No 228
>1kap_P Alkaline protease; calcium binding protein, zinc metalloprotease; 1.64A {Pseudomonas aeruginosa} SCOP: b.80.7.1 d.92.1.6 PDB: 1jiw_P 1akl_A
Probab=24.80 E-value=29 Score=35.86 Aligned_cols=11 Identities=45% Similarity=0.682 Sum_probs=9.5
Q ss_pred HHHHHhhHHHH
Q 040736 99 IIIVHESGHFL 109 (448)
Q Consensus 99 ~i~vHE~gH~~ 109 (448)
.+++||+||.+
T Consensus 181 ~va~HEIGHaL 191 (479)
T 1kap_P 181 QTLTHEIGHTL 191 (479)
T ss_dssp HHHHHHHHHHH
T ss_pred eeehhhhhhhh
Confidence 67899999975
No 229
>3edh_A Bone morphogenetic protein 1; vicinal disulfide, alternative splicing, calcium, chondrogenesis, cleavage on PAIR of basic residues, cytokine; 1.25A {Homo sapiens} SCOP: d.92.1.0 PDB: 3edg_A 3edi_A
Probab=23.77 E-value=29 Score=31.60 Aligned_cols=11 Identities=55% Similarity=0.848 Sum_probs=9.3
Q ss_pred HHHHHhhHHHH
Q 040736 99 IIIVHESGHFL 109 (448)
Q Consensus 99 ~i~vHE~gH~~ 109 (448)
-+++||++|++
T Consensus 89 g~i~HEl~Hal 99 (201)
T 3edh_A 89 GIVVHELGHVV 99 (201)
T ss_dssp HHHHHHHHHHH
T ss_pred chhHHHHHHHh
Confidence 47799999985
No 230
>3lqb_A Hatching enzyme, LOC792177 protein; hydrolase, metalloprotease, astacin, metal- protease; 1.10A {Danio rerio}
Probab=23.36 E-value=30 Score=31.54 Aligned_cols=11 Identities=45% Similarity=0.389 Sum_probs=9.3
Q ss_pred HHHHHhhHHHH
Q 040736 99 IIIVHESGHFL 109 (448)
Q Consensus 99 ~i~vHE~gH~~ 109 (448)
-+++||++|++
T Consensus 95 g~i~HEl~HaL 105 (199)
T 3lqb_A 95 GIAQHELNHAL 105 (199)
T ss_dssp HHHHHHHHHHH
T ss_pred chHHHHHHHHh
Confidence 47799999985
No 231
>3ma2_D Matrix metalloproteinase-14; protein - protein complex, cleavage on PAIR of basic residue disulfide bond, membrane, metal-binding; 2.05A {Homo sapiens} SCOP: d.92.1.11 PDB: 1bqq_M 1buv_M
Probab=23.22 E-value=30 Score=30.94 Aligned_cols=10 Identities=50% Similarity=0.876 Sum_probs=8.6
Q ss_pred HHHHHhhHHH
Q 040736 99 IIIVHESGHF 108 (448)
Q Consensus 99 ~i~vHE~gH~ 108 (448)
.+.+||+||.
T Consensus 124 ~v~~hE~Gh~ 133 (181)
T 3ma2_D 124 LVAVHELGHA 133 (181)
T ss_dssp HHHHHHHHHH
T ss_pred eeehhhcccc
Confidence 3779999998
No 232
>4dv8_A Lethal factor; endopeptidase, zinc dependent, hydrolase; HET: 0LX; 1.63A {Bacillus anthracis} PDB: 1yqy_A* 2l0r_A
Probab=22.51 E-value=42 Score=34.55 Aligned_cols=17 Identities=29% Similarity=0.430 Sum_probs=13.3
Q ss_pred HHHHHHhhHHHHHHHHh
Q 040736 98 AIIIVHESGHFLAAYLQ 114 (448)
Q Consensus 98 ~~i~vHE~gH~~~A~~~ 114 (448)
...++||+||++.....
T Consensus 431 s~tlLHEfGHaVD~~vg 447 (526)
T 4dv8_A 431 SEGFIHEFGHAVDDYAG 447 (526)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHh
Confidence 35779999999876654
No 233
>3sks_A Putative oligoendopeptidase F; structural genomics, center for structural genomics of infec diseases, csgid, protease, hydrolase; 2.05A {Bacillus anthracis}
Probab=22.30 E-value=33 Score=36.11 Aligned_cols=20 Identities=25% Similarity=0.439 Sum_probs=14.3
Q ss_pred HHHHHHHhhHHHHHHHHhCC
Q 040736 97 TAIIIVHESGHFLAAYLQGI 116 (448)
Q Consensus 97 ~~~i~vHE~gH~~~A~~~gv 116 (448)
-+..+.||+||++=......
T Consensus 353 dV~TL~HE~GHalH~~ls~~ 372 (567)
T 3sks_A 353 DIDVLTHEAGHAFQVYESRK 372 (567)
T ss_dssp HHHHHHHHHHHHHHHHHTTT
T ss_pred hHHHHHHHccHHHHHHHHcc
Confidence 34567999999977655543
No 234
>3lq0_A Proastacin; metallopeptidase, zymogen activation, proenzyme, protease, D bond, hydrolase, metal-binding, metalloprotease, zymogen; 1.45A {Astacus astacus} PDB: 1iab_A 1iaa_A 1ast_A 1iac_A 1iad_A 1iae_A 1qji_A* 1qjj_A
Probab=20.96 E-value=35 Score=31.89 Aligned_cols=11 Identities=27% Similarity=0.232 Sum_probs=9.5
Q ss_pred HHHHHhhHHHH
Q 040736 99 IIIVHESGHFL 109 (448)
Q Consensus 99 ~i~vHE~gH~~ 109 (448)
-+++||++|++
T Consensus 122 g~i~HEl~HaL 132 (235)
T 3lq0_A 122 GTILHALMHAI 132 (235)
T ss_dssp HHHHHHHHHHH
T ss_pred chHHHHHHHHh
Confidence 57899999986
No 235
>3ahn_A Oligopeptidase, PZ peptidase A; hydrolase, hydrolase-hydrolase inhibitor complex; HET: 3A1; 1.80A {Geobacillus SP} PDB: 3ahm_A* 3aho_A* 2h1n_A 2h1j_A
Probab=20.67 E-value=37 Score=35.43 Aligned_cols=17 Identities=29% Similarity=0.577 Sum_probs=12.0
Q ss_pred HHHHHHhhHHHHHHHHh
Q 040736 98 AIIIVHESGHFLAAYLQ 114 (448)
Q Consensus 98 ~~i~vHE~gH~~~A~~~ 114 (448)
+..+.||+||++=..+-
T Consensus 351 v~TL~HE~GHa~H~~ls 367 (564)
T 3ahn_A 351 IDVLTHEAGHAFQVYES 367 (564)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred hhhHHHHhCHHHHHHHh
Confidence 45679999998654433
No 236
>2ejq_A Hypothetical protein TTHA0227; NPPSFA, national project on protein structural and functional analyses; 2.08A {Thermus thermophilus} SCOP: d.92.1.17
Probab=20.28 E-value=39 Score=28.71 Aligned_cols=19 Identities=26% Similarity=0.251 Sum_probs=12.1
Q ss_pred HHHHHhhHHHH--HHHHhCCc
Q 040736 99 IIIVHESGHFL--AAYLQGIH 117 (448)
Q Consensus 99 ~i~vHE~gH~~--~A~~~gv~ 117 (448)
-+++||+||.+ .|..-|..
T Consensus 91 ~tvvHEiaHhfe~lag~~gls 111 (130)
T 2ejq_A 91 ETMLHELRHHLESLAGRDDLV 111 (130)
T ss_dssp HHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHhHHHHHhhcccCCCC
Confidence 47799999997 55444433
Done!