Query 040737
Match_columns 662
No_of_seqs 125 out of 151
Neff 3.2
Searched_HMMs 46136
Date Fri Mar 29 11:17:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040737.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040737hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF04833 COBRA: COBRA-like pro 100.0 9.1E-79 2E-83 578.1 17.7 167 237-417 1-169 (169)
2 PF00553 CBM_2: Cellulose bind 95.1 0.096 2.1E-06 46.4 7.6 53 224-277 2-54 (101)
3 PF04833 COBRA: COBRA-like pro 94.6 0.19 4.1E-06 49.9 8.9 104 78-193 1-143 (169)
4 PF00553 CBM_2: Cellulose bind 84.8 1.6 3.5E-05 38.7 4.8 40 76-115 13-52 (101)
5 smart00637 CBD_II CBD_II domai 70.7 6.4 0.00014 34.0 4.1 39 77-115 7-45 (92)
6 smart00637 CBD_II CBD_II domai 69.1 10 0.00022 32.8 5.0 43 234-277 5-47 (92)
7 PF10563 CdCA1: Cadmium carbon 41.0 5.9 0.00013 41.0 -1.3 18 497-514 5-22 (218)
8 PF03128 CXCXC: CXCXC repeat; 35.0 19 0.00041 22.7 0.8 8 441-448 7-14 (14)
9 COG5341 Uncharacterized protei 28.1 57 0.0012 31.8 3.0 42 586-628 42-83 (132)
10 PF07131 DUF1382: Protein of u 24.4 27 0.00059 30.0 0.2 22 135-156 5-26 (61)
11 PF03173 CHB_HEX: Putative car 21.9 1.2E+02 0.0026 30.1 4.1 88 74-176 28-117 (164)
No 1
>PF04833 COBRA: COBRA-like protein; InterPro: IPR006918 In Arabidopsis thaliana (Mouse-ear cress) members of the family are all extracellular glycosyl-phosphatidyl inositol-anchored proteins (GPI-linked) []. The type example of the family is COBRA (Q94KT8 from SWISSPROT) and the family is generally annotated as COBRA-like (COBL). COBRA is involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. It may act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface. Some members of this family are annotated as phytochelatin synthase, but these annotations are incorrect [].
Probab=100.00 E-value=9.1e-79 Score=578.12 Aligned_cols=167 Identities=44% Similarity=0.851 Sum_probs=158.8
Q ss_pred eEEEEEEecCcccCCCC--CCeeeeeecCCeeeEEecCceeeeecCCCcccCCCCcccccCCCCccccccCCCeeeeCCC
Q 040737 237 YLAQVTMENEHPLGRLD--HWNLTWEWQNNEFISQMRGAFTHKKDISGCLYGPAGKYYKEFDFSQVVNCEKKPIISDLPA 314 (662)
Q Consensus 237 Y~A~VTi~N~q~yr~Id--gW~L~W~W~k~E~IwsM~GA~~te~DqgdCs~g~ag~~yk~~dfs~ph~C~k~P~IVDLpP 314 (662)
|+|+|||+|||+||||| ||+|||+|+|+||||+|+|||++| ||||+ +||+++ ++||||+|+|+||||||
T Consensus 1 Y~A~VTi~N~~~yr~id~pgW~L~W~W~~~E~IwsM~GA~~td--qgdCs-----~~~~~~--~~ph~C~k~P~IvDLpp 71 (169)
T PF04833_consen 1 YVAQVTISNYQPYRHIDNPGWNLGWTWAKKEFIWSMKGAQTTD--QGDCS-----KFYKDG--DFPHCCKKRPTIVDLPP 71 (169)
T ss_pred CEEEEEEecCCeecccCCCCceEeeEEcCCEEEEEeeCceecc--CCccc-----ccccCC--CCCcccCCCCEEEeCCC
Confidence 99999999999999998 599999999999999999999995 69995 577775 56789999999999999
Q ss_pred CCcCccccCCCCccccCCeeccCccCcccceeeEEEEEeecCCCCCCCccCCCCCeEEccCCCCCcccCCCeeeCCCccc
Q 040737 315 TYFNDTKLGKLPYCCRNGSLLPKLMDESKATSVFQLTVFKLPPHDNRTALVPPMKWQIRGDLNPNYRCGPPIRVEPTEFP 394 (662)
Q Consensus 315 ~~~~d~q~g~i~nCCr~GvL~~~~qDps~S~SsFQm~Vgk~p~~~NrT~v~pP~Nftl~gp~gPgYtCGpp~~V~PT~f~ 394 (662)
+++||+|+ +||||||||+||+|||+||+|+|||+||++||++|++.++||+||+|++| ||||+||+|++|+||+|+
T Consensus 72 ~~~~n~qi---~nCCrgG~l~~~~~Dps~s~S~FQm~Vg~~pp~~~~~~~~~P~nf~l~~~-~pgYtCg~~~~V~pT~f~ 147 (169)
T PF04833_consen 72 GTPYNQQI---GNCCRGGVLSSWAQDPSKSVSAFQMSVGKAPPGTNNTTVKPPQNFTLGGP-GPGYTCGPPKRVSPTVFP 147 (169)
T ss_pred CCCCcccc---ccccCCCEECCcccChhhCceEEEEEEeEeeccCCCceecCCcceEEcCC-CCCcCCCCcceeCCceee
Confidence 99999994 68999999999999999999999999999999988888999999999996 999999999999999999
Q ss_pred CCCCCceeeEEeEEEEEeEeeec
Q 040737 395 DPSGLQSTTTAVASWQVVCNITK 417 (662)
Q Consensus 395 dpdgl~r~tqAl~TWqVtCnySq 417 (662)
|+|| ||+|||||||||||||||
T Consensus 148 ~~~g-~r~t~A~~TWqvtC~ysq 169 (169)
T PF04833_consen 148 DPDG-RRTTQALMTWQVTCNYSQ 169 (169)
T ss_pred CCCC-CEEEEEEEEEeEEEEeeC
Confidence 9999 799999999999999997
No 2
>PF00553 CBM_2: Cellulose binding domain; InterPro: IPR001919 The microbial degradation of cellulose and xylans requires several types of enzyme such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) []. Structurally, cellulases and xylanases generally consist of a catalytic domain joined to a cellulose-binding domain (CBD) by a short linker sequence rich in proline and/or hydroxy-amino acids. The CBD domain is found either at the N-terminal or at the C-terminal extremity of these enzymes. As it is shown in the following schematic representation, there are two conserved cysteines in this CBD domain - one at each extremity of the domain - which have been shown [] to be involved in a disulphide bond. There are also four conserved tryptophan, two are involved in cellulose binding. The CBD of a number of bacterial cellulases has been shown to consist of about 105 amino acid residues [, ]. +-------------------------------------------------+ | | xCxxxxWxxxxxNxxxWxxxxxxxWxxxxxxxxWNxxxxxGxxxxxxxxxxCx 'C': conserved cysteine involved in a disulphide bond. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process; PDB: 2CZN_A 2CWR_A 1HEH_C 1HEJ_C 3NDZ_E 3NDY_E 2XBD_A 1E5C_A 1XBD_A 1E5B_A ....
Probab=95.08 E-value=0.096 Score=46.41 Aligned_cols=53 Identities=19% Similarity=0.486 Sum_probs=47.7
Q ss_pred EEEEEEEEeeCCCeEEEEEEecCcccCCCCCCeeeeeecCCeeeEEecCceeee
Q 040737 224 LLSYDVMQAYGNNYLAQVTMENEHPLGRLDHWNLTWEWQNNEFISQMRGAFTHK 277 (662)
Q Consensus 224 TI~wDV~q~~~dgY~A~VTi~N~q~yr~IdgW~L~W~W~k~E~IwsM~GA~~te 277 (662)
+++|.|.+--++||.+.|+|.|... ..|.+|+|.|+-..++-|-++.+|..+.
T Consensus 2 tv~~~v~~~W~~Gf~~~v~v~N~~~-~~i~~W~v~~~~~~~~~i~~~Wna~~s~ 54 (101)
T PF00553_consen 2 TVTYTVTNSWGGGFQGEVTVTNNGS-SPINGWTVTFTFPSGQTITSSWNATVSQ 54 (101)
T ss_dssp EEEEEEEEESSSEEEEEEEEEESSS-STEESEEEEEEESTTEEEEEEESCEEEE
T ss_pred EEEEEEecccCCCeEEEEEEEECCC-CccCCEEEEEEeCCCCEEeeeeccEEEe
Confidence 6889999888999999999999887 5778999999999889998999998765
No 3
>PF04833 COBRA: COBRA-like protein; InterPro: IPR006918 In Arabidopsis thaliana (Mouse-ear cress) members of the family are all extracellular glycosyl-phosphatidyl inositol-anchored proteins (GPI-linked) []. The type example of the family is COBRA (Q94KT8 from SWISSPROT) and the family is generally annotated as COBRA-like (COBL). COBRA is involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. It may act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface. Some members of this family are annotated as phytochelatin synthase, but these annotations are incorrect [].
Probab=94.59 E-value=0.19 Score=49.87 Aligned_cols=104 Identities=24% Similarity=0.406 Sum_probs=68.3
Q ss_pred eeeeeEeecc-Ccccccc--eEEEeeeccceEEEecCCeeeccCC---------CcCc-------------e------ec
Q 040737 78 FKAMATVVNA-GSEELKA--WKLFVGFRHREILVSATGATIIDGG---------DFPA-------------A------VG 126 (662)
Q Consensus 78 F~s~~tv~N~-G~~~lk~--W~~~vgF~h~EiLVsa~gavl~dg~---------~~P~-------------~------v~ 126 (662)
|-|.+|+.|. -++.|++ |++.-..+.+||+-|--||--.|-. ++|- . ++
T Consensus 1 Y~A~VTi~N~~~yr~id~pgW~L~W~W~~~E~IwsM~GA~~tdqgdCs~~~~~~~~ph~C~k~P~IvDLpp~~~~n~qi~ 80 (169)
T PF04833_consen 1 YVAQVTISNYQPYRHIDNPGWNLGWTWAKKEFIWSMKGAQTTDQGDCSKFYKDGDFPHCCKKRPTIVDLPPGTPYNQQIG 80 (169)
T ss_pred CEEEEEEecCCeecccCCCCceEeeEEcCCEEEEEeeCceeccCCcccccccCCCCCcccCCCCEEEeCCCCCCCccccc
Confidence 4578888885 4678888 9999999999999999999877644 3332 1 12
Q ss_pred ----CCcEEecCChhhhhhHHhhcCCccceEEEEEEeeeee--ccCCCCCCCCCceeecC--CCccCCCccCCCc
Q 040737 127 ----NGTTFVGNPQADLKTAIETAGDYPQISAQIEIKGTQF--GVKPPTIPMPKSLKLVN--DGYLCPAAKNDGS 193 (662)
Q Consensus 127 ----ngt~f~g~p~~dLktaI~TAgd~~qiq~~i~l~GT~F--gv~~p~~PmP~~i~l~n--~gy~Cp~~~~~~~ 193 (662)
|||..+ ...|.. +-.+.++|.==.+ |...-.+.+|++.+|.. +||+|.+|....-
T Consensus 81 nCCrgG~l~~--~~~Dps----------~s~S~FQm~Vg~~pp~~~~~~~~~P~nf~l~~~~pgYtCg~~~~V~p 143 (169)
T PF04833_consen 81 NCCRGGVLSS--WAQDPS----------KSVSAFQMSVGKAPPGTNNTTVKPPQNFTLGGPGPGYTCGPPKRVSP 143 (169)
T ss_pred cccCCCEECC--cccChh----------hCceEEEEEEeEeeccCCCceecCCcceEEcCCCCCcCCCCcceeCC
Confidence 233321 233333 3333444421122 22334578999999976 9999999887653
No 4
>PF00553 CBM_2: Cellulose binding domain; InterPro: IPR001919 The microbial degradation of cellulose and xylans requires several types of enzyme such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) []. Structurally, cellulases and xylanases generally consist of a catalytic domain joined to a cellulose-binding domain (CBD) by a short linker sequence rich in proline and/or hydroxy-amino acids. The CBD domain is found either at the N-terminal or at the C-terminal extremity of these enzymes. As it is shown in the following schematic representation, there are two conserved cysteines in this CBD domain - one at each extremity of the domain - which have been shown [] to be involved in a disulphide bond. There are also four conserved tryptophan, two are involved in cellulose binding. The CBD of a number of bacterial cellulases has been shown to consist of about 105 amino acid residues [, ]. +-------------------------------------------------+ | | xCxxxxWxxxxxNxxxWxxxxxxxWxxxxxxxxWNxxxxxGxxxxxxxxxxCx 'C': conserved cysteine involved in a disulphide bond. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process; PDB: 2CZN_A 2CWR_A 1HEH_C 1HEJ_C 3NDZ_E 3NDY_E 2XBD_A 1E5C_A 1XBD_A 1E5B_A ....
Probab=84.84 E-value=1.6 Score=38.73 Aligned_cols=40 Identities=28% Similarity=0.464 Sum_probs=34.4
Q ss_pred ceeeeeeEeeccCcccccceEEEeeeccceEEEecCCeee
Q 040737 76 WAFKAMATVVNAGSEELKAWKLFVGFRHREILVSATGATI 115 (662)
Q Consensus 76 y~F~s~~tv~N~G~~~lk~W~~~vgF~h~EiLVsa~gavl 115 (662)
-.|.+.++|.|.|.+.+++|+|-+.|.+.+-|.++=+|-+
T Consensus 13 ~Gf~~~v~v~N~~~~~i~~W~v~~~~~~~~~i~~~Wna~~ 52 (101)
T PF00553_consen 13 GGFQGEVTVTNNGSSPINGWTVTFTFPSGQTITSSWNATV 52 (101)
T ss_dssp SEEEEEEEEEESSSSTEESEEEEEEESTTEEEEEEESCEE
T ss_pred CCeEEEEEEEECCCCccCCEEEEEEeCCCCEEeeeeccEE
Confidence 4699999999999999999999999997777777755443
No 5
>smart00637 CBD_II CBD_II domain.
Probab=70.66 E-value=6.4 Score=34.04 Aligned_cols=39 Identities=26% Similarity=0.462 Sum_probs=33.0
Q ss_pred eeeeeeEeeccCcccccceEEEeeeccceEEEecCCeee
Q 040737 77 AFKAMATVVNAGSEELKAWKLFVGFRHREILVSATGATI 115 (662)
Q Consensus 77 ~F~s~~tv~N~G~~~lk~W~~~vgF~h~EiLVsa~gavl 115 (662)
.|.++++|.|+|...+.+|++-+-|.+.+-+.+.-++.+
T Consensus 7 G~~~~v~vtN~~~~~~~~W~v~~~~~~~~~i~~~Wn~~~ 45 (92)
T smart00637 7 GFTANVTVTNTGSSAINGWTVTFDLPGGQTVTNSWNATV 45 (92)
T ss_pred CEEEEEEEEeCCCCcccCeEEEEEcCCCcEEeeeEEEEE
Confidence 389999999999999999999999988766666666554
No 6
>smart00637 CBD_II CBD_II domain.
Probab=69.06 E-value=10 Score=32.81 Aligned_cols=43 Identities=19% Similarity=0.425 Sum_probs=35.3
Q ss_pred CCCeEEEEEEecCcccCCCCCCeeeeeecCCeeeEEecCceeee
Q 040737 234 GNNYLAQVTMENEHPLGRLDHWNLTWEWQNNEFISQMRGAFTHK 277 (662)
Q Consensus 234 ~dgY~A~VTi~N~q~yr~IdgW~L~W~W~k~E~IwsM~GA~~te 277 (662)
.+||.+.|+|.|..-. .|++|.+.|+...++-|-++..|....
T Consensus 5 ~~G~~~~v~vtN~~~~-~~~~W~v~~~~~~~~~i~~~Wn~~~~~ 47 (92)
T smart00637 5 GSGFTANVTVTNTGSS-AINGWTVTFDLPGGQTVTNSWNATVSQ 47 (92)
T ss_pred CCCEEEEEEEEeCCCC-cccCeEEEEEcCCCcEEeeeEEEEEEe
Confidence 5699999999997553 488999999998888787888877654
No 7
>PF10563 CdCA1: Cadmium carbonic anhydrase repeat; InterPro: IPR018883 This entry represents the cadmium-binding carbonic anhydrase domain of marine diatoms []. The prevalence of carbonic anhydrase in diatoms that contain Cd at their active site probably reflects the very low concentration of Zn in the marine environment and the difficulty in acquiring inorganic carbon for photosynthesis. Compared with alpha- and gamma-carbonic anhydrases that use three histidines to coordinate the zinc-atom, this beta-carbonic anhydrase has two cysteines and one histidine, and rapidly binds cadmium []. ; PDB: 3BOH_A 3BOJ_A 3BOC_A 3BOE_A 3BOB_A.
Probab=41.02 E-value=5.9 Score=40.99 Aligned_cols=18 Identities=22% Similarity=0.702 Sum_probs=9.0
Q ss_pred CCCceeEEEEEecCCCCc
Q 040737 497 DNCGVSINWHVSTDYKDG 514 (662)
Q Consensus 497 dmCpVrIhWHVk~nYk~~ 514 (662)
.||||+||||+-.-....
T Consensus 5 ~mc~vnvhwHlgaEh~s~ 22 (218)
T PF10563_consen 5 SMCPVNVHWHLGAEHYSE 22 (218)
T ss_dssp EEEECGGG------CCCC
T ss_pred eeeeeeeecccccchhhh
Confidence 599999999998744433
No 8
>PF03128 CXCXC: CXCXC repeat; InterPro: IPR004153 This repeat contains the conserved pattern CXCXC where X can be any amino acid. The repeat is found in up to five copies in Vascular endothelial growth factor C []. In the salivary glands of the dipteran Chironomus tentans, a specific messenger ribonucleoprotein (mRNP) particle, the Balbiani ring (BR) granule, can be visualized during its assembly on the gene and during its nucleocytoplasmic transport. This repeat is found over 70 copies in the balbiani ring protein 3 (Q03376 from SWISSPROT). It is also found in some silk proteins [].
Probab=35.00 E-value=19 Score=22.70 Aligned_cols=8 Identities=63% Similarity=1.784 Sum_probs=6.2
Q ss_pred CCCcCCCC
Q 040737 441 PTCACGCP 448 (662)
Q Consensus 441 pTCACGC~ 448 (662)
.||+|+|+
T Consensus 7 ~tC~C~Cp 14 (14)
T PF03128_consen 7 DTCQCECP 14 (14)
T ss_pred CCcCccCC
Confidence 46999985
No 9
>COG5341 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.05 E-value=57 Score=31.77 Aligned_cols=42 Identities=31% Similarity=0.419 Sum_probs=35.4
Q ss_pred CCCCCCceeEEEEEeecCCCCceeeCCCcCcceeEeeCCcccC
Q 040737 586 EPQVPGKQQSVISFLKKKTPNIDVQRGDGFPAKVYFNGEECAL 628 (662)
Q Consensus 586 dp~v~GkvQSeilf~K~~t~~ft~~~GwaFP~rVyFNGeEC~m 628 (662)
.-+|.|++=-++.++|.. .+|++++-+||=-+|-|.|+|=+.
T Consensus 42 ~i~v~Gk~~r~i~l~Kg~-~t~~v~~~~g~~n~vev~g~~IRV 83 (132)
T COG5341 42 EISVDGKVIRTIPLTKGN-ETFDVKENGGFYNKVEVKGNRIRV 83 (132)
T ss_pred EEEECCEEEEEEEcccCC-ccEEEEcCCCceEEEEEcCCEEEE
Confidence 345679999999999866 799999999999999999986543
No 10
>PF07131 DUF1382: Protein of unknown function (DUF1382); InterPro: IPR009814 This entry is represented by Bacteriophage lambda, Xis. This entry overlaps with IPR009750, both representing lambda Xis. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical Escherichia coli and Bacteriophage lambda-like proteins of around 60 residues in length. The function of this family is unknown.
Probab=24.44 E-value=27 Score=30.04 Aligned_cols=22 Identities=27% Similarity=0.442 Sum_probs=17.5
Q ss_pred ChhhhhhHHhhcCCccceEEEE
Q 040737 135 PQADLKTAIETAGDYPQISAQI 156 (662)
Q Consensus 135 p~~dLktaI~TAgd~~qiq~~i 156 (662)
.+.||+.+||+|--|+|+-.++
T Consensus 5 sPv~LR~~lE~A~~La~~GIRF 26 (61)
T PF07131_consen 5 SPVDLRKALEMAHSLAHIGIRF 26 (61)
T ss_pred cHHHHHHHHHHHHHHHHcCcee
Confidence 3567999999999999874444
No 11
>PF03173 CHB_HEX: Putative carbohydrate binding domain; InterPro: IPR004866 This domain represents the N-terminal domain in chitobiases and beta-hexosaminidases 3.2.1.52 from EC. Chitobiases degrade chitin, which forms the exoskeleton in insects and crustaceans, and which is one of the most abundant polysaccharides on earth []. Beta-hexosaminidases are composed of either a HexA/HexB heterodimer or a HexB homodimer, and can hydrolyse diverse substrates, including GM(2)-gangliosides; mutations in this enzyme are associated with Tay-Sachs disease []. HexB is structurally similar to chitobiase, consisting of a beta sandwich structure; this structure is similar to that found in the cellulose-binding domain of cellulase from Cellulomonas fimi (IPR001919 from INTERPRO), suggesting that it may function as a carbohydrate-binding domain.; GO: 0030246 carbohydrate binding; PDB: 1C7T_A 1QBA_A 1QBB_A 1C7S_A.
Probab=21.86 E-value=1.2e+02 Score=30.06 Aligned_cols=88 Identities=27% Similarity=0.402 Sum_probs=41.8
Q ss_pred CcceeeeeeEeeccCcccccc--eEEEeeeccceEEEecCCeeeccCCCcCceecCCcEEecCChhhhhhHHhhcCCccc
Q 040737 74 QAWAFKAMATVVNAGSEELKA--WKLFVGFRHREILVSATGATIIDGGDFPAAVGNGTTFVGNPQADLKTAIETAGDYPQ 151 (662)
Q Consensus 74 Qpy~F~s~~tv~N~G~~~lk~--W~~~vgF~h~EiLVsa~gavl~dg~~~P~~v~ngt~f~g~p~~dLktaI~TAgd~~q 151 (662)
-...|++.+|+.|.|...+.. |+++..+. |.|+-.-+ ..|=..-=||--+.=.|-.+.+- | -||+
T Consensus 28 ~~~c~~~~ltl~n~~~~~~~~~dW~IYf~~i-r~i~~~~s-------~~f~i~hinGDl~kl~Pt~~F~g-l-~~Ge--- 94 (164)
T PF03173_consen 28 WASCFRAELTLTNPGDAPLPKSDWAIYFSSI-RPILQVDS-------DQFKITHINGDLHKLTPTAGFKG-L-APGE--- 94 (164)
T ss_dssp GG-EEEEEEEEEE-SS-B------EEEEE-S-S-EEEESS-------TTEEEEE-STTEEEEEE-TT----B--TTE---
T ss_pred cccceEEEEEEEcCCCccCCCCCeEEEEecc-eeeeccCC-------CCeEEEEEcCeEEEEeECCCCCc-c-CCCC---
Confidence 377899999999999988776 99999986 66763221 12222333665554444433220 0 1333
Q ss_pred eEEEEEEeeeeeccCCCCCCCCCce
Q 040737 152 ISAQIEIKGTQFGVKPPTIPMPKSL 176 (662)
Q Consensus 152 iq~~i~l~GT~Fgv~~p~~PmP~~i 176 (662)
+.+|.++|..+-+..-.+ ||...
T Consensus 95 -s~~I~~~~~~w~~~~tD~-mp~~Y 117 (164)
T PF03173_consen 95 -SLEIPFVGEYWQVSETDA-MPGWY 117 (164)
T ss_dssp -EEEEEEEEES---SGGGS-----E
T ss_pred -EEEEEEEccccEEEEccC-CCceE
Confidence 568888998887775333 66553
Done!