Query 040737
Match_columns 662
No_of_seqs 125 out of 151
Neff 3.2
Searched_HMMs 29240
Date Mon Mar 25 18:17:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040737.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040737hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ndz_E Endoglucanase D; cellot 95.3 0.041 1.4E-06 48.9 7.4 54 223-277 3-56 (107)
2 3icg_A Endoglucanase D; cellul 93.1 0.17 5.7E-06 54.1 7.7 58 219-277 379-436 (515)
3 1exg_A EXO-1,4-beta-D-glycanas 92.8 0.19 6.5E-06 44.4 6.3 56 220-277 5-60 (110)
4 1e5b_A Xylanase D; hydrolase, 91.9 0.046 1.6E-06 46.9 1.2 48 224-277 4-51 (87)
5 2cwr_A Chitinase; chitin-bindi 91.0 0.52 1.8E-05 41.6 7.0 48 225-277 12-59 (103)
6 1heh_C Endo-1,4-beta-xylanase 84.2 0.27 9.4E-06 42.3 0.9 50 222-277 3-52 (88)
7 3ndz_E Endoglucanase D; cellot 83.3 1.1 3.9E-05 39.6 4.5 40 77-116 16-55 (107)
8 1exg_A EXO-1,4-beta-D-glycanas 83.0 1.1 3.7E-05 39.6 4.2 39 77-115 20-58 (110)
9 3icg_A Endoglucanase D; cellul 61.3 6.6 0.00023 41.9 4.5 40 77-116 396-435 (515)
10 2cwr_A Chitinase; chitin-bindi 26.6 64 0.0022 28.3 4.3 36 77-115 22-57 (103)
No 1
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=95.32 E-value=0.041 Score=48.88 Aligned_cols=54 Identities=22% Similarity=0.456 Sum_probs=46.4
Q ss_pred eEEEEEEEEeeCCCeEEEEEEecCcccCCCCCCeeeeeecCCeeeEEecCceeee
Q 040737 223 LLLSYDVMQAYGNNYLAQVTMENEHPLGRLDHWNLTWEWQNNEFISQMRGAFTHK 277 (662)
Q Consensus 223 iTI~wDV~q~~~dgY~A~VTi~N~q~yr~IdgW~L~W~W~k~E~IwsM~GA~~te 277 (662)
.++.|.|.+--.+||.|.|||.|.-- ..|++|+|+|++..++-|-++..|..+.
T Consensus 3 c~v~y~v~~~W~~Gf~~~vtVtN~g~-~~i~gWtv~~~~p~g~~it~~Wna~~s~ 56 (107)
T 3ndz_E 3 VEVTYAITNSWGSGASVNVTIKNNGT-TPINGWTLKWTMPINQTITNMWSASFVA 56 (107)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEECSS-SCEESCEEEEECCTTEEEEEEESEEEEE
T ss_pred cEEEEEEcccCCCCEEEEEEEEeCCC-CcccCcEEEEEcCCCCEEecccceEEEe
Confidence 47899998888999999999999743 3478999999999999999999997653
No 2
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=93.12 E-value=0.17 Score=54.11 Aligned_cols=58 Identities=21% Similarity=0.428 Sum_probs=50.1
Q ss_pred CCCCeEEEEEEEEeeCCCeEEEEEEecCcccCCCCCCeeeeeecCCeeeEEecCceeee
Q 040737 219 QNGDLLLSYDVMQAYGNNYLAQVTMENEHPLGRLDHWNLTWEWQNNEFISQMRGAFTHK 277 (662)
Q Consensus 219 ~~GniTI~wDV~q~~~dgY~A~VTi~N~q~yr~IdgW~L~W~W~k~E~IwsM~GA~~te 277 (662)
+.|-.+++|.|.+.-.+||.|.|||.|.-- .-|+||+|+|++..++-|-+...|..+.
T Consensus 379 ~~~~~~~~~~~~~~W~~g~~~~v~v~n~~~-~~~~~W~~~~~~~~~~~i~~~wn~~~~~ 436 (515)
T 3icg_A 379 PQSAVEVTYAITNSWGSGASVNVTIKNNGT-TPINGWTLKWTMPINQTITNMWSASFVA 436 (515)
T ss_dssp --CCEEEEEEEEEECSSEEEEEEEEEECSS-SCEESCEEEEECCTTEEEEEEESEEEEE
T ss_pred CCCceEEEEEEecCCCCccEEEEEEEeCCC-CCcCCeEEEEEeCCCCEeeccccceEEe
Confidence 467799999999999999999999999754 3578999999999999999999998764
No 3
>1exg_A EXO-1,4-beta-D-glycanase; cellulose binding domain, cellulose degradation; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1exh_A
Probab=92.80 E-value=0.19 Score=44.41 Aligned_cols=56 Identities=16% Similarity=0.397 Sum_probs=46.9
Q ss_pred CCCeEEEEEEEEeeCCCeEEEEEEecCcccCCCCCCeeeeeecCCeeeEEecCceeee
Q 040737 220 NGDLLLSYDVMQAYGNNYLAQVTMENEHPLGRLDHWNLTWEWQNNEFISQMRGAFTHK 277 (662)
Q Consensus 220 ~GniTI~wDV~q~~~dgY~A~VTi~N~q~yr~IdgW~L~W~W~k~E~IwsM~GA~~te 277 (662)
.|..+++|. .+.-.+||.|.|||.|.-- ..|++|+|.|++..++-|-++..|..+.
T Consensus 5 ~~~c~v~y~-~~~W~~Gf~~~vtVtN~g~-~~i~gWtv~~~~~~g~~i~~~Wna~~s~ 60 (110)
T 1exg_A 5 PAGCQVLWG-VNQWNTGFTANVTVKNTSS-APVDGWTLTFSFPSGQQVTQAWSSTVTQ 60 (110)
T ss_dssp CCCEEEECC-EEESSSEEEEEEEEEECSS-SCEESEEEEEECSSSCEEEEEESSEEEE
T ss_pred CCcEEEEEE-eCCCCCCEEEEEEEEeCCC-CcccceEEEEEcCCCcEEecccceEEEc
Confidence 467899998 6777899999999999643 3478999999999998898998887654
No 4
>1e5b_A Xylanase D; hydrolase, xylan binding domain, beta-sheet; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1e5c_A 1xbd_A 2xbd_A
Probab=91.91 E-value=0.046 Score=46.91 Aligned_cols=48 Identities=6% Similarity=0.168 Sum_probs=40.1
Q ss_pred EEEEEEEEeeCCCeEEEEEEecCcccCCCCCCeeeeeecCCeeeEEecCceeee
Q 040737 224 LLSYDVMQAYGNNYLAQVTMENEHPLGRLDHWNLTWEWQNNEFISQMRGAFTHK 277 (662)
Q Consensus 224 TI~wDV~q~~~dgY~A~VTi~N~q~yr~IdgW~L~W~W~k~E~IwsM~GA~~te 277 (662)
+..|.|.+.-.+||.|.|+|.| +.+|+|.|++..++=|-++..|..+.
T Consensus 4 ta~y~v~~~W~~Gf~~~vtVtn------~~gWtv~~~~~~g~~i~~~Wn~~~s~ 51 (87)
T 1e5b_A 4 SVTATRAEEWSDGFNVTYSVSG------SSAWTVNLALNGSQTIQASWNANVTG 51 (87)
T ss_dssp CCBCCBCCCCSSEEEEEEBCCS------CSSCCCEEECCTTCCEEEEESBCCEE
T ss_pred EEEEEECccCCCCEEEEEEEEc------cCceEEEEEcCCCCEEeeeeceeEec
Confidence 4566666666799999999998 69999999999999888888887664
No 5
>2cwr_A Chitinase; chitin-binding domain, endoglucanase, hyperthermophilic, hydrolase; 1.70A {Pyrococcus furiosus} PDB: 2czn_A
Probab=91.03 E-value=0.52 Score=41.61 Aligned_cols=48 Identities=13% Similarity=0.229 Sum_probs=40.2
Q ss_pred EEEEEEEeeCCCeEEEEEEecCcccCCCCCCeeeeeecCCeeeEEecCceeee
Q 040737 225 LSYDVMQAYGNNYLAQVTMENEHPLGRLDHWNLTWEWQNNEFISQMRGAFTHK 277 (662)
Q Consensus 225 I~wDV~q~~~dgY~A~VTi~N~q~yr~IdgW~L~W~W~k~E~IwsM~GA~~te 277 (662)
.+|. .+--.+||.|.|||.|.- +++|+|.|++..++=|-++..|..+.
T Consensus 12 c~y~-~n~W~~Gf~~~vtVtN~g----~~gWtv~~~~~~g~~it~~Wna~~s~ 59 (103)
T 2cwr_A 12 LEVK-VNDWGSGAEYDVTLNLDG----QYDWTVKVKLAPGATVGSFWSANKQE 59 (103)
T ss_dssp EEEE-EEECSSEEEEEEEEEESS----CCCCEEEEEECTTCEEEEEESEEEEE
T ss_pred EEEE-ECCCCCceEEEEEEeCCC----CCcEEEEEECCCCcEEecccceEEec
Confidence 3677 455578999999999983 48999999999999999999888764
No 6
>1heh_C Endo-1,4-beta-xylanase D; hydrolase(xylan degradation), hydrolase, xylan binding domain, beta-sheet; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1hej_C
Probab=84.22 E-value=0.27 Score=42.27 Aligned_cols=50 Identities=10% Similarity=0.143 Sum_probs=40.4
Q ss_pred CeEEEEEEEEeeCCCeEEEEEEecCcccCCCCCCeeeeeecCCeeeEEecCceeee
Q 040737 222 DLLLSYDVMQAYGNNYLAQVTMENEHPLGRLDHWNLTWEWQNNEFISQMRGAFTHK 277 (662)
Q Consensus 222 niTI~wDV~q~~~dgY~A~VTi~N~q~yr~IdgW~L~W~W~k~E~IwsM~GA~~te 277 (662)
--+.+|.|.+.-.+||.|.|||. + .++|+|.|++..++=|-++..|..+.
T Consensus 3 ~Ctaty~~~n~W~~Gf~a~vtVt-----g-~~gWtv~~~~~~gq~vt~~Wna~~s~ 52 (88)
T 1heh_C 3 SCSVSAVRGEEWADRFNVTYSVS-----G-SSSWVVTLGLNGGQSVQSSWNAALTG 52 (88)
T ss_dssp CCCCCCCCCSBCSSEEEEEEECS-----S-CCSCCCEEECCSSCCCCCEESSEEEC
T ss_pred ceEEEEEEcccCCCceEEEEEEe-----c-cccEEEEEECCCCCEEEccccccCcc
Confidence 34566776666679999999998 3 48999999999999898888887653
No 7
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=83.29 E-value=1.1 Score=39.63 Aligned_cols=40 Identities=15% Similarity=0.288 Sum_probs=34.8
Q ss_pred eeeeeeEeeccCcccccceEEEeeeccceEEEecCCeeec
Q 040737 77 AFKAMATVVNAGSEELKAWKLFVGFRHREILVSATGATII 116 (662)
Q Consensus 77 ~F~s~~tv~N~G~~~lk~W~~~vgF~h~EiLVsa~gavl~ 116 (662)
.|.++++|+|+|.+.|.+|+|-+.|.-.+-+.++=+|.+.
T Consensus 16 Gf~~~vtVtN~g~~~i~gWtv~~~~p~g~~it~~Wna~~s 55 (107)
T 3ndz_E 16 GASVNVTIKNNGTTPINGWTLKWTMPINQTITNMWSASFV 55 (107)
T ss_dssp EEEEEEEEEECSSSCEESCEEEEECCTTEEEEEEESEEEE
T ss_pred CEEEEEEEEeCCCCcccCcEEEEEcCCCCEEecccceEEE
Confidence 4999999999999999999999999877777777777654
No 8
>1exg_A EXO-1,4-beta-D-glycanase; cellulose binding domain, cellulose degradation; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1exh_A
Probab=82.99 E-value=1.1 Score=39.60 Aligned_cols=39 Identities=28% Similarity=0.434 Sum_probs=32.8
Q ss_pred eeeeeeEeeccCcccccceEEEeeeccceEEEecCCeee
Q 040737 77 AFKAMATVVNAGSEELKAWKLFVGFRHREILVSATGATI 115 (662)
Q Consensus 77 ~F~s~~tv~N~G~~~lk~W~~~vgF~h~EiLVsa~gavl 115 (662)
.|.+.++|+|+|.+.|.+|+|-+.|...+-+.++=++.+
T Consensus 20 Gf~~~vtVtN~g~~~i~gWtv~~~~~~g~~i~~~Wna~~ 58 (110)
T 1exg_A 20 GFTANVTVKNTSSAPVDGWTLTFSFPSGQQVTQAWSSTV 58 (110)
T ss_dssp EEEEEEEEEECSSSCEESEEEEEECSSSCEEEEEESSEE
T ss_pred CEEEEEEEEeCCCCcccceEEEEEcCCCcEEecccceEE
Confidence 499999999999999999999999998766666655544
No 9
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=61.31 E-value=6.6 Score=41.94 Aligned_cols=40 Identities=15% Similarity=0.288 Sum_probs=35.4
Q ss_pred eeeeeeEeeccCcccccceEEEeeeccceEEEecCCeeec
Q 040737 77 AFKAMATVVNAGSEELKAWKLFVGFRHREILVSATGATII 116 (662)
Q Consensus 77 ~F~s~~tv~N~G~~~lk~W~~~vgF~h~EiLVsa~gavl~ 116 (662)
.|.+++||+|+|...|.+|+|-+.|.-.+-+.++=+|.++
T Consensus 396 g~~~~v~v~n~~~~~~~~W~~~~~~~~~~~i~~~wn~~~~ 435 (515)
T 3icg_A 396 GASVNVTIKNNGTTPINGWTLKWTMPINQTITNMWSASFV 435 (515)
T ss_dssp EEEEEEEEEECSSSCEESCEEEEECCTTEEEEEEESEEEE
T ss_pred ccEEEEEEEeCCCCCcCCeEEEEEeCCCCEeeccccceEE
Confidence 4999999999999999999999999877778888777664
No 10
>2cwr_A Chitinase; chitin-binding domain, endoglucanase, hyperthermophilic, hydrolase; 1.70A {Pyrococcus furiosus} PDB: 2czn_A
Probab=26.55 E-value=64 Score=28.29 Aligned_cols=36 Identities=17% Similarity=0.071 Sum_probs=27.8
Q ss_pred eeeeeeEeeccCcccccceEEEeeeccceEEEecCCeee
Q 040737 77 AFKAMATVVNAGSEELKAWKLFVGFRHREILVSATGATI 115 (662)
Q Consensus 77 ~F~s~~tv~N~G~~~lk~W~~~vgF~h~EiLVsa~gavl 115 (662)
.|.+.++|.|.|. .+|++-+.|.-.+-+-++=+|.+
T Consensus 22 Gf~~~vtVtN~g~---~gWtv~~~~~~g~~it~~Wna~~ 57 (103)
T 2cwr_A 22 GAEYDVTLNLDGQ---YDWTVKVKLAPGATVGSFWSANK 57 (103)
T ss_dssp EEEEEEEEEESSC---CCCEEEEEECTTCEEEEEESEEE
T ss_pred ceEEEEEEeCCCC---CcEEEEEECCCCcEEecccceEE
Confidence 4899999999986 79999999986665555544444
Done!