BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040738
(88 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 32.3 bits (72), Expect = 0.072, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 9 NLSLLEHFVDSSRDDTNFTCKLMRRLDVALLCVQENPNDRPSTLEVSSMLKNE 61
N +L+ +D D C R D+ +C Q NPN RP+ LE+ ++LK++
Sbjct: 239 NEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 290
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 32.3 bits (72), Expect = 0.076, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 9 NLSLLEHFVDSSRDDTNFTCKLMRRLDVALLCVQENPNDRPSTLEVSSMLKNE 61
N +L+ +D D C R D+ +C Q NPN RP+ LE+ ++LK++
Sbjct: 238 NEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 32.0 bits (71), Expect = 0.092, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 9 NLSLLEHFVDSSRDDTNFTCKLMRRLDVALLCVQENPNDRPSTLEVSSMLKNE 61
N +L+ +D D C R D+ +C Q NPN RP+ LE+ ++LK++
Sbjct: 238 NEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 31.6 bits (70), Expect = 0.10, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 34 LDVALLCVQENPNDRPSTLEVSSMLKNE 61
+ VALLC Q +P +RP EV ML+ +
Sbjct: 282 IQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 31.6 bits (70), Expect = 0.12, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 34 LDVALLCVQENPNDRPSTLEVSSMLKNE 61
+ VALLC Q +P +RP EV ML+ +
Sbjct: 290 IQVALLCTQSSPMERPKMSEVVRMLEGD 317
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 30.0 bits (66), Expect = 0.35, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 9 NLSLLEHFVDSSRDDTNFTCKLMRRLDVALLCVQENPNDRPSTLEVSSMLKNE 61
N +L+ +D D C R D+ +C Q NP RP+ LE+ ++LK++
Sbjct: 238 NEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 30.0 bits (66), Expect = 0.35, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 9 NLSLLEHFVDSSRDDTNFTCKLMRRLDVALLCVQENPNDRPSTLEVSSMLKNE 61
N +L+ +D D C R D+ +C Q NP RP+ LE+ ++LK++
Sbjct: 237 NEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 288
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 29.6 bits (65), Expect = 0.40, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 9 NLSLLEHFVDSSRDDTNFTCKLMRRLDVALLCVQENPNDRPSTLEVSSMLKNE 61
N +L+ +D D C R D+ +C Q NP RP+ LE+ ++LK++
Sbjct: 238 NEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 29.6 bits (65), Expect = 0.42, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 34 LDVALLCVQENPNDRPSTLEVSSMLKNE 61
L++ +C Q NP RPS LE+ S +K E
Sbjct: 257 LELMRMCWQYNPKMRPSFLEIISSIKEE 284
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 29.6 bits (65), Expect = 0.47, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 9 NLSLLEHFVDSSRDDTNFTCKLMRRLDVALLCVQENPNDRPSTLEVSSMLKNE 61
N +L+ +D D C R D+ +C Q NP RP+ LE+ ++LK++
Sbjct: 238 NEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 29.6 bits (65), Expect = 0.49, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 9 NLSLLEHFVDSSRDDTNFTCKLMRRLDVALLCVQENPNDRPSTLEVSSMLKNE 61
N +L+ +D D C R D+ +C Q NP RP+ LE+ ++LK++
Sbjct: 235 NEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 286
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 29.3 bits (64), Expect = 0.51, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 34 LDVALLCVQENPNDRPSTLEVSSMLKNE 61
L++ +C Q NP RPS LE+ S +K E
Sbjct: 255 LELMRMCWQYNPKMRPSFLEIISSIKEE 282
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 28.5 bits (62), Expect = 0.90, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 39 LCVQENPNDRPSTLEVSSMLKNE 61
+C Q NP RPS LE+ S +K E
Sbjct: 265 MCWQYNPKMRPSFLEIISSIKEE 287
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 28.5 bits (62), Expect = 0.91, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 39 LCVQENPNDRPSTLEVSSMLKNE 61
+C Q NP RPS LE+ S +K E
Sbjct: 297 MCWQYNPKMRPSFLEIISSIKEE 319
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 28.5 bits (62), Expect = 0.94, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 39 LCVQENPNDRPSTLEVSSMLKNE 61
+C Q NP RPS LE+ S +K E
Sbjct: 269 MCWQYNPKMRPSFLEIISSIKEE 291
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 39 LCVQENPNDRPSTLEVSSMLKNE 61
+C Q NP RPS LE+ S +K E
Sbjct: 266 MCWQYNPKMRPSFLEIISSIKEE 288
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 39 LCVQENPNDRPSTLEVSSMLKNE 61
+C Q NP RPS LE+ S +K E
Sbjct: 268 MCWQYNPKMRPSFLEIISSIKEE 290
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 39 LCVQENPNDRPSTLEVSSMLKNE 61
+C Q NP RPS LE+ S +K E
Sbjct: 262 MCWQYNPKMRPSFLEIISSIKEE 284
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 39 LCVQENPNDRPSTLEVSSMLKNE 61
+C Q NP RPS LE+ S +K E
Sbjct: 275 MCWQYNPKMRPSFLEIISSIKEE 297
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 39 LCVQENPNDRPSTLEVSSMLKNE 61
+C Q NP RPS LE+ S +K E
Sbjct: 269 MCWQYNPKMRPSFLEIISSIKEE 291
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 39 LCVQENPNDRPSTLEVSSMLKNE 61
+C Q NP RPS LE+ S +K E
Sbjct: 268 MCWQYNPKMRPSFLEIISSIKEE 290
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 28.1 bits (61), Expect = 1.1, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 39 LCVQENPNDRPSTLEVSSMLKNE 61
+C Q NP RPS LE+ S +K E
Sbjct: 275 MCWQYNPKMRPSFLEIISSIKEE 297
>pdb|4GMS|L Chain L, Crystal Structure Of Heterosubtypic Fab S1391 IN COMPLEX
WITH Influenza A H3 Hemagglutinin
pdb|4GMS|M Chain M, Crystal Structure Of Heterosubtypic Fab S1391 IN COMPLEX
WITH Influenza A H3 Hemagglutinin
pdb|4GMS|N Chain N, Crystal Structure Of Heterosubtypic Fab S1391 IN COMPLEX
WITH Influenza A H3 Hemagglutinin
pdb|4GMT|L Chain L, Crystal Structure Of Heterosubtypic Fab S1391
pdb|4GMT|M Chain M, Crystal Structure Of Heterosubtypic Fab S1391
Length = 214
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 22 DDTNFTCKLMRRLDVALLCVQENPNDRPSTLEVSS 56
D + TCK + +D + QE P P TL S+
Sbjct: 17 DRVSVTCKASQNVDTNVAWYQEKPGQSPKTLIYSA 51
>pdb|4FHR|A Chain A, Crystal Structure Of The Complex Between The Flagellar
Motor Proteins Flig And Flim
Length = 187
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 34 LDVALLCVQENPNDRPSTLEVSSMLKNETTN 64
LD+ + ENP +RP T +S+++ E TN
Sbjct: 84 LDIIMGGPGENPPNRPPTEIETSIMRKEVTN 114
>pdb|2HP7|A Chain A, Structure Of Flim Provides Insight Into Assembly Of The
Switch Complex In The Bacterial Flagella Motor
Length = 183
Score = 26.2 bits (56), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 34 LDVALLCVQENPNDRPSTLEVSSMLKNETTN 64
LD+ + ENP +RP T +S+++ E TN
Sbjct: 84 LDIIMGGPGENPPNRPPTEIETSIMRKEVTN 114
>pdb|3SOH|A Chain A, Architecture Of The Flagellar Rotor
pdb|3SOH|C Chain C, Architecture Of The Flagellar Rotor
Length = 188
Score = 26.2 bits (56), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 34 LDVALLCVQENPNDRPSTLEVSSMLKNETTN 64
LD+ + ENP +RP T +S+++ E TN
Sbjct: 82 LDIIMGGPGENPPNRPPTEIETSIMRKEVTN 112
>pdb|2EF1|A Chain A, Crystal Structure Of The Extracellular Domain Of Human
Cd38
pdb|2EF1|B Chain B, Crystal Structure Of The Extracellular Domain Of Human
Cd38
Length = 256
Score = 25.4 bits (54), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 3 LCSIDENLSLLEHFVDSSRDDTNFTCKLMRRLDVALLCVQENPNDRPSTLEV 54
LC D + LE + S+ + F+CK + R D L CV+ NP D T E+
Sbjct: 209 LCQ-DPTIKELESII--SKRNIQFSCKNIYRPDKFLQCVK-NPEDSSCTSEI 256
>pdb|3DZJ|A Chain A, Crystal Structure Of Human Cd38 Extracellular Domain E226q
Mutant, Nmn Complex
pdb|3DZJ|B Chain B, Crystal Structure Of Human Cd38 Extracellular Domain E226q
Mutant, Nmn Complex
Length = 262
Score = 25.4 bits (54), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 3 LCSIDENLSLLEHFVDSSRDDTNFTCKLMRRLDVALLCVQENPNDRPSTLEV 54
LC D + LE + S+ + F+CK + R D L CV+ NP D T E+
Sbjct: 215 LCQ-DPTIKELESII--SKRNIQFSCKNIYRPDKFLQCVK-NPEDSSCTSEI 262
>pdb|1ZVM|A Chain A, Crystal Structure Of Human Cd38: Cyclic-Adp-Ribosyl
SynthetaseNAD+ Glycohydrolase
pdb|1ZVM|B Chain B, Crystal Structure Of Human Cd38: Cyclic-Adp-Ribosyl
SynthetaseNAD+ Glycohydrolase
pdb|1ZVM|C Chain C, Crystal Structure Of Human Cd38: Cyclic-Adp-Ribosyl
SynthetaseNAD+ Glycohydrolase
pdb|1ZVM|D Chain D, Crystal Structure Of Human Cd38: Cyclic-Adp-Ribosyl
SynthetaseNAD+ Glycohydrolase
Length = 256
Score = 25.4 bits (54), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 3 LCSIDENLSLLEHFVDSSRDDTNFTCKLMRRLDVALLCVQENPNDRPSTLEV 54
LC D + LE + S+ + F+CK + R D L CV+ NP D T E+
Sbjct: 209 LCQ-DPTIKELESII--SKRNIQFSCKNIYRPDKFLQCVK-NPEDSSCTSEI 256
>pdb|1YH3|A Chain A, Crystal Structure Of Human Cd38 Extracellular Domain
pdb|1YH3|B Chain B, Crystal Structure Of Human Cd38 Extracellular Domain
Length = 256
Score = 25.4 bits (54), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 3 LCSIDENLSLLEHFVDSSRDDTNFTCKLMRRLDVALLCVQENPNDRPSTLEV 54
LC D + LE + S+ + F+CK + R D L CV+ NP D T E+
Sbjct: 209 LCQ-DPTIKELESII--SKRNIQFSCKNIYRPDKFLQCVK-NPEDSSCTSEI 256
>pdb|2O3S|A Chain A, Structural Basis For Formation And Hydrolysis Of Calcium
Messenger Cyclic Adp-Ribose By Human Cd38
pdb|2O3S|B Chain B, Structural Basis For Formation And Hydrolysis Of Calcium
Messenger Cyclic Adp-Ribose By Human Cd38
Length = 262
Score = 25.4 bits (54), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 3 LCSIDENLSLLEHFVDSSRDDTNFTCKLMRRLDVALLCVQENPNDRPSTLEV 54
LC D + LE + S+ + F+CK + R D L CV+ NP D T E+
Sbjct: 215 LCQ-DPTIKELESII--SKRNIQFSCKNIYRPDKFLQCVK-NPEDSSCTSEI 262
>pdb|2HCT|A Chain A, Acidic Residues At The Active Sites Of Cd38 And
Adp-Ribosyl Cyclase Determine Naapd Synthesis And
Hydrolysis Activities
pdb|2HCT|B Chain B, Acidic Residues At The Active Sites Of Cd38 And
Adp-Ribosyl Cyclase Determine Naapd Synthesis And
Hydrolysis Activities
Length = 262
Score = 25.4 bits (54), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 3 LCSIDENLSLLEHFVDSSRDDTNFTCKLMRRLDVALLCVQENPNDRPSTLEV 54
LC D + LE + S+ + F+CK + R D L CV+ NP D T E+
Sbjct: 215 LCQ-DPTIKELESII--SKRNIQFSCKNIYRPDKFLQCVK-NPEDSSCTSEI 262
>pdb|3F6Y|A Chain A, Conformational Closure Of The Catalytic Site Of Human Cd38
Induced By Calcium
Length = 262
Score = 25.4 bits (54), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 3 LCSIDENLSLLEHFVDSSRDDTNFTCKLMRRLDVALLCVQENPNDRPSTLEV 54
LC D + LE + S+ + F+CK + R D L CV+ NP D T E+
Sbjct: 215 LCQ-DPTIKELESII--SKRNIQFSCKNIYRPDKFLQCVK-NPEDSSCTSEI 262
>pdb|2I65|A Chain A, Structural Basis For The Mechanistic Understanding Human
Cd38 Controlled Multiple Catalysis
pdb|2I65|B Chain B, Structural Basis For The Mechanistic Understanding Human
Cd38 Controlled Multiple Catalysis
pdb|2O3Q|A Chain A, Structural Basis For Formation And Hydrolysis Of Calcium
Messenger Cyclic Adp-Ribose By Human Cd38
pdb|2O3Q|B Chain B, Structural Basis For Formation And Hydrolysis Of Calcium
Messenger Cyclic Adp-Ribose By Human Cd38
pdb|2O3T|A Chain A, Structural Basis For Formation And Hydrolysis Of Calcium
Messenger Cyclic Adp-Ribose By Human Cd38
pdb|2O3T|B Chain B, Structural Basis For Formation And Hydrolysis Of Calcium
Messenger Cyclic Adp-Ribose By Human Cd38
pdb|2O3U|A Chain A, Structural Basis For Formation And Hydrolysis Of Calcium
Messenger Cyclic Adp-Ribose By Human Cd38
pdb|2O3U|B Chain B, Structural Basis For Formation And Hydrolysis Of Calcium
Messenger Cyclic Adp-Ribose By Human Cd38
pdb|2PGL|A Chain A, Catalysis Associated Conformational Changes Revealed By
Human Cd38 Complexed With A Non-Hydrolyzable Substrate
Analog
pdb|2PGL|B Chain B, Catalysis Associated Conformational Changes Revealed By
Human Cd38 Complexed With A Non-Hydrolyzable Substrate
Analog
Length = 262
Score = 25.4 bits (54), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 3 LCSIDENLSLLEHFVDSSRDDTNFTCKLMRRLDVALLCVQENPNDRPSTLEV 54
LC D + LE + S+ + F+CK + R D L CV+ NP D T E+
Sbjct: 215 LCQ-DPTIKELESII--SKRNIQFSCKNIYRPDKFLQCVK-NPEDSSCTSEI 262
>pdb|2O3R|A Chain A, Structural Basis For Formation And Hydrolysis Of Calcium
Messenger Cyclic Adp-Ribose By Human Cd38
pdb|2O3R|B Chain B, Structural Basis For Formation And Hydrolysis Of Calcium
Messenger Cyclic Adp-Ribose By Human Cd38
Length = 262
Score = 25.4 bits (54), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 3 LCSIDENLSLLEHFVDSSRDDTNFTCKLMRRLDVALLCVQENPNDRPSTLEV 54
LC D + LE + S+ + F+CK + R D L CV+ NP D T E+
Sbjct: 215 LCQ-DPTIKELESII--SKRNIQFSCKNIYRPDKFLQCVK-NPEDSSCTSEI 262
>pdb|3OFS|A Chain A, Dynamic Conformations Of The Cd38-Mediated Nad Cyclization
Captured Using Multi-Copy Crystallography
pdb|3OFS|B Chain B, Dynamic Conformations Of The Cd38-Mediated Nad Cyclization
Captured Using Multi-Copy Crystallography
pdb|3OFS|C Chain C, Dynamic Conformations Of The Cd38-Mediated Nad Cyclization
Captured Using Multi-Copy Crystallography
pdb|3OFS|D Chain D, Dynamic Conformations Of The Cd38-Mediated Nad Cyclization
Captured Using Multi-Copy Crystallography
pdb|3OFS|E Chain E, Dynamic Conformations Of The Cd38-Mediated Nad Cyclization
Captured Using Multi-Copy Crystallography
pdb|3OFS|F Chain F, Dynamic Conformations Of The Cd38-Mediated Nad Cyclization
Captured Using Multi-Copy Crystallography
Length = 257
Score = 25.4 bits (54), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 20 SRDDTNFTCKLMRRLDVALLCVQENPNDRPSTLEV 54
S+ + F+CK + R D L CV+ NP D T E+
Sbjct: 224 SKRNIQFSCKNIYRPDKFLQCVK-NPEDSSCTSEI 257
>pdb|2I66|A Chain A, Structural Basis For The Mechanistic Understanding Human
Cd38 Controlled Multiple Catalysis
pdb|2I66|B Chain B, Structural Basis For The Mechanistic Understanding Human
Cd38 Controlled Multiple Catalysis
pdb|2I67|A Chain A, Structural Basis For The Mechanistic Understanding Human
Cd38 Controlled Multiple Catalysis
pdb|2I67|B Chain B, Structural Basis For The Mechanistic Understanding Human
Cd38 Controlled Multiple Catalysis
pdb|2PGJ|A Chain A, Catalysis Associated Conformational Changes Revealed By
Human Cd38 Complexed With A Non-Hydrolyzable Substrate
Analog
pdb|2PGJ|B Chain B, Catalysis Associated Conformational Changes Revealed By
Human Cd38 Complexed With A Non-Hydrolyzable Substrate
Analog
pdb|3DZF|A Chain A, Crystal Structure Of Human Cd38 Extracellular Domain
Complexed With A Covalent Intermediate,
Ara-F-Ribose-5'-Phosphate
pdb|3DZF|B Chain B, Crystal Structure Of Human Cd38 Extracellular Domain
Complexed With A Covalent Intermediate,
Ara-F-Ribose-5'-Phosphate
pdb|3DZF|C Chain C, Crystal Structure Of Human Cd38 Extracellular Domain
Complexed With A Covalent Intermediate,
Ara-F-Ribose-5'-Phosphate
pdb|3DZF|D Chain D, Crystal Structure Of Human Cd38 Extracellular Domain
Complexed With A Covalent Intermediate,
Ara-F-Ribose-5'-Phosphate
pdb|3DZF|E Chain E, Crystal Structure Of Human Cd38 Extracellular Domain
Complexed With A Covalent Intermediate,
Ara-F-Ribose-5'-Phosphate
pdb|3DZF|F Chain F, Crystal Structure Of Human Cd38 Extracellular Domain
Complexed With A Covalent Intermediate,
Ara-F-Ribose-5'-Phosphate
pdb|3DZG|A Chain A, Crystal Structure Of Human Cd38 Extracellular Domain,
Ara-F- Ribose-5'-PhosphateNICOTINAMIDE COMPLEX
pdb|3DZG|B Chain B, Crystal Structure Of Human Cd38 Extracellular Domain,
Ara-F- Ribose-5'-PhosphateNICOTINAMIDE COMPLEX
pdb|3DZH|A Chain A, Crystal Structure Of Human Cd38 Extracellular Domain, Gtp
Complex
pdb|3DZH|B Chain B, Crystal Structure Of Human Cd38 Extracellular Domain, Gtp
Complex
pdb|3DZI|A Chain A, Crystal Structure Of Human Cd38 Extracellular Domain,
Ribose-5'-phosphate Intermediate/gtp Complex
pdb|3DZI|B Chain B, Crystal Structure Of Human Cd38 Extracellular Domain,
Ribose-5'-phosphate Intermediate/gtp Complex
pdb|3DZK|A Chain A, Crystal Structure Of Human Cd38 Extracellular Domain, Nmn
Complex
pdb|3DZK|B Chain B, Crystal Structure Of Human Cd38 Extracellular Domain, Nmn
Complex
pdb|3I9M|A Chain A, Crystal Structure Of Human Cd38 Complexed With An Analog
Ara-2'f-Adpr
pdb|3I9M|B Chain B, Crystal Structure Of Human Cd38 Complexed With An Analog
Ara-2'f-Adpr
pdb|3I9N|A Chain A, Crystal Structure Of Human Cd38 Complexed With An Analog
Ribo-2'f-Adp Ribose
pdb|3I9N|B Chain B, Crystal Structure Of Human Cd38 Complexed With An Analog
Ribo-2'f-Adp Ribose
pdb|3U4H|A Chain A, Cd38 Structure-Based Inhibitor Design Using The N1-Cyclic
Inosine 5'- Diphosphate Ribose Template
pdb|3U4H|B Chain B, Cd38 Structure-Based Inhibitor Design Using The N1-Cyclic
Inosine 5'- Diphosphate Ribose Template
pdb|3U4I|A Chain A, Cd38 Structure-Based Inhibitor Design Using The N1-Cyclic
Inosine 5'- Diphosphate Ribose Template
pdb|3U4I|B Chain B, Cd38 Structure-Based Inhibitor Design Using The N1-Cyclic
Inosine 5'- Diphosphate Ribose Template
Length = 262
Score = 25.4 bits (54), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 3 LCSIDENLSLLEHFVDSSRDDTNFTCKLMRRLDVALLCVQENPNDRPSTLEV 54
LC D + LE + S+ + F+CK + R D L CV+ NP D T E+
Sbjct: 215 LCQ-DPTIKELESII--SKRNIQFSCKNIYRPDKFLQCVK-NPEDSSCTSEI 262
>pdb|3RAJ|A Chain A, Crystal Structure Of Human Cd38 In Complex With The Fab
Fragment Of Antibody Hb7
Length = 257
Score = 25.4 bits (54), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 20 SRDDTNFTCKLMRRLDVALLCVQENPNDRPSTLEV 54
S+ + F+CK + R D L CV+ NP D T E+
Sbjct: 224 SKRNIQFSCKNIYRPDKFLQCVK-NPEDSSCTSEI 257
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.130 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,439,787
Number of Sequences: 62578
Number of extensions: 77243
Number of successful extensions: 283
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 253
Number of HSP's gapped (non-prelim): 42
length of query: 88
length of database: 14,973,337
effective HSP length: 56
effective length of query: 32
effective length of database: 11,468,969
effective search space: 367007008
effective search space used: 367007008
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 45 (21.9 bits)