Query 040739
Match_columns 594
No_of_seqs 183 out of 473
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 18:19:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040739.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040739hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2h5c_A Alpha-lytic protease; s 99.9 2.6E-22 8.8E-27 194.0 15.4 178 219-445 15-198 (198)
2 2pfe_A Protease A, alkaline se 99.8 1.9E-20 6.7E-25 179.5 14.5 173 219-445 14-186 (186)
3 1hpg_A Glutamic acid specific 99.8 2.7E-20 9.4E-25 177.4 15.0 176 218-443 11-187 (187)
4 2oua_A Serine protease, protei 99.8 3.1E-20 1.1E-24 178.0 14.8 175 219-444 13-188 (188)
5 2sga_A Proteinase A; hydrolase 99.8 1.4E-18 4.7E-23 163.0 12.2 180 202-443 2-181 (181)
6 2ea3_A Chymotrypsin; celloulom 99.7 1.3E-17 4.4E-22 160.2 11.5 170 219-446 15-184 (189)
7 2qa9_E Streptogrisin-B; chymot 99.6 2.1E-15 7.2E-20 141.6 15.2 183 202-443 2-185 (185)
8 1l1j_A Heat shock protease HTR 98.8 9.4E-08 3.2E-12 94.4 16.0 94 328-439 127-224 (239)
9 3k6y_A Serine protease, possib 98.7 2.5E-07 8.5E-12 90.0 14.6 93 327-439 123-222 (237)
10 3tjo_A Serine protease HTRA1; 98.6 2.7E-07 9.3E-12 90.2 11.0 154 224-438 67-225 (231)
11 3qo6_A Protease DO-like 1, chl 98.5 5.7E-07 2E-11 92.9 13.7 93 328-438 124-221 (348)
12 3sti_A Protease DEGQ; serine p 98.5 2.1E-07 7.2E-12 92.5 10.1 157 224-438 67-228 (245)
13 3lgi_A Protease DEGS; stress-s 98.5 3.1E-07 1.1E-11 89.7 10.8 160 224-438 57-220 (237)
14 1y8t_A Hypothetical protein RV 98.5 1.1E-06 3.7E-11 89.5 14.1 100 328-437 110-216 (324)
15 4fln_A Protease DO-like 2, chl 98.5 1.2E-06 4E-11 96.7 15.4 89 328-436 145-238 (539)
16 4a8c_A Periplasmic PH-dependen 98.4 9.1E-07 3.1E-11 94.3 11.9 155 224-436 67-226 (436)
17 3stj_A Protease DEGQ; serine p 98.4 1.8E-06 6.3E-11 89.5 12.2 155 224-436 67-226 (345)
18 3num_A Serine protease HTRA1; 98.3 1.9E-06 6.6E-11 88.2 11.6 154 224-438 50-208 (332)
19 1te0_A Protease DEGS; two doma 98.3 1.4E-06 4.8E-11 88.8 9.5 91 328-436 112-207 (318)
20 3pv2_A DEGQ; trypsin fold, PDZ 98.2 2.5E-06 8.7E-11 91.5 9.1 88 328-436 147-244 (451)
21 1lcy_A HTRA2 serine protease; 98.2 1.7E-06 5.8E-11 88.6 6.8 89 328-439 117-210 (325)
22 1ky9_A Protease DO, DEGP, HTRA 98.1 5.2E-06 1.8E-10 89.1 9.8 88 328-436 157-249 (448)
23 2as9_A Serine protease; trypsi 98.1 1.4E-05 4.6E-10 76.3 11.4 61 328-409 110-178 (210)
24 2w7s_A Serine protease SPLA; h 98.0 2.1E-05 7.3E-10 73.7 8.9 61 328-409 106-174 (200)
25 2o8l_A V8 protease, taphylococ 97.9 4.2E-05 1.4E-09 76.4 11.4 133 237-409 45-189 (274)
26 1wcz_A Glutamyl endopeptidase; 97.8 7.2E-05 2.5E-09 74.5 9.6 91 289-409 92-189 (268)
27 1agj_A Epidermolytic toxin A; 97.8 3.4E-05 1.2E-09 74.7 6.7 117 288-436 118-235 (242)
28 2vid_A Serine protease SPLB; h 97.7 6.8E-05 2.3E-09 69.9 7.7 61 328-409 109-177 (204)
29 2w5e_A Putative serine proteas 97.7 0.00023 7.9E-09 66.8 10.8 27 378-409 121-147 (163)
30 1qtf_A Exfoliative toxin B; se 97.5 0.00011 3.8E-09 71.8 6.1 26 378-408 180-205 (246)
31 1zyo_A Serine protease; beta-b 97.4 0.00079 2.7E-08 65.2 10.8 157 219-437 27-185 (191)
32 1mbm_A NSP4 proteinase, chymot 97.1 0.00091 3.1E-08 65.1 7.1 29 378-413 108-136 (198)
33 3s9c_A Vipera russelli protein 96.5 0.015 5.3E-07 55.0 10.6 44 378-435 174-217 (234)
34 1ao5_A Glandular kallikrein-13 96.3 0.029 1E-06 53.5 11.6 38 368-411 172-210 (237)
35 4e7n_A Snake-venom thrombin-li 96.2 0.027 9.1E-07 53.4 10.5 29 377-411 177-205 (238)
36 3s69_A Thrombin-like enzyme de 96.2 0.033 1.1E-06 52.6 11.0 29 377-411 173-201 (234)
37 1npm_A Neuropsin; serine prote 96.1 0.031 1.1E-06 53.1 10.7 44 378-435 174-217 (225)
38 2zch_P Prostate-specific antig 96.1 0.046 1.6E-06 52.2 11.7 105 288-411 94-210 (237)
39 1gvz_A Kallikrein-1E2; antigen 96.1 0.026 9E-07 53.9 9.9 105 288-411 94-210 (237)
40 2psx_A Kallikrein-5; zinc inhi 96.0 0.03 1E-06 53.3 9.9 35 368-408 163-197 (227)
41 4ag1_A Chymase; hydrolase-de n 95.9 0.029 1E-06 52.9 9.5 51 368-435 165-216 (226)
42 2aiq_A Protein C activator; sn 95.9 0.041 1.4E-06 52.5 10.3 36 367-408 159-195 (231)
43 2bdg_A Kallikrein-4; serine pr 95.8 0.04 1.4E-06 52.4 9.7 38 368-411 160-198 (223)
44 1ton_A Tonin; hydrolase(serine 95.7 0.03 1E-06 53.4 8.7 105 288-411 92-208 (235)
45 1fuj_A PR3, myeloblastin; hydr 95.7 0.12 4E-06 48.7 12.5 23 378-406 170-192 (221)
46 1a7s_A Heparin binding protein 95.7 0.09 3.1E-06 49.7 11.7 28 378-411 169-196 (225)
47 4i8h_A Cationic trypsin, beta- 95.6 0.018 6.2E-07 54.3 6.6 36 368-409 160-196 (223)
48 1sgf_A 7S NGF, nerve growth fa 95.6 0.032 1.1E-06 53.5 8.3 28 378-411 186-213 (240)
49 3gov_B MAsp-1; complement, ser 95.5 0.07 2.4E-06 50.7 10.4 42 367-408 180-222 (251)
50 1hj8_A Trypsin I; hydrolase, r 95.5 0.035 1.2E-06 52.8 8.1 35 368-408 159-194 (222)
51 1spj_A Kallikrein 1; serine pr 95.5 0.077 2.6E-06 50.5 10.5 28 378-411 184-211 (238)
52 3rp2_A RAT MAST cell protease 95.5 0.049 1.7E-06 51.2 9.0 41 378-435 176-216 (224)
53 1eq9_A Chymotrypsin; FIRE ANT, 95.4 0.018 6.2E-07 54.7 5.8 35 368-408 162-196 (222)
54 2any_A Kininogenin, plasma kal 95.4 0.15 5E-06 48.8 12.1 39 368-408 171-210 (241)
55 3mfj_A Cationic trypsin; serin 95.3 0.064 2.2E-06 51.0 9.5 36 367-408 159-195 (223)
56 1lo6_A Kallikrein 6, HK6; seri 95.3 0.15 5.1E-06 48.4 11.7 28 378-411 170-197 (223)
57 3mmg_A Nuclear inclusion prote 95.2 0.17 5.8E-06 50.8 12.3 72 327-411 101-174 (241)
58 3gyl_B Prostasin; ENAC, zymoge 95.2 0.077 2.6E-06 50.9 9.6 40 367-408 176-216 (261)
59 2z7f_E Leukocyte elastase; ser 95.2 0.15 5.1E-06 48.0 11.4 23 378-406 167-189 (218)
60 1fxy_A Coagulation factor XA-t 95.2 0.042 1.4E-06 52.4 7.5 36 367-408 163-199 (228)
61 1mza_A Pro-granzyme K; apoptos 95.1 0.077 2.6E-06 50.7 9.2 36 367-408 172-208 (240)
62 4dgj_A Enteropeptidase catalyt 95.0 0.093 3.2E-06 49.7 9.5 40 368-409 170-210 (235)
63 2qxi_A Kallikrein-7; S1 pocket 95.0 0.064 2.2E-06 51.0 8.3 28 378-411 170-197 (224)
64 3fzz_A Granzyme C; hydrolase, 94.9 0.07 2.4E-06 50.2 8.3 27 377-409 177-203 (227)
65 3tvj_B Mannan-binding lectin s 94.8 0.12 3.9E-06 48.9 9.4 42 367-408 171-213 (242)
66 1pq7_A Trypsin; ultra-high res 94.7 0.11 3.6E-06 49.3 8.9 37 367-408 162-199 (224)
67 3f1s_B Vitamin K-dependent pro 94.6 0.09 3.1E-06 52.1 8.5 42 381-435 226-268 (283)
68 3ncl_A Suppressor of tumorigen 94.5 0.36 1.2E-05 45.6 12.3 31 378-409 185-215 (241)
69 2xw9_A Complement factor D; im 94.5 0.1 3.5E-06 49.3 8.3 37 368-411 168-204 (228)
70 2zgc_A Granzyme M; serine prot 94.4 0.31 1.1E-05 46.8 11.6 30 378-411 176-205 (240)
71 1euf_A Duodenase; serine prote 94.4 0.074 2.5E-06 50.6 7.1 22 381-408 179-200 (227)
72 3h7o_A Group 3 allergen smipp- 94.4 0.068 2.3E-06 50.2 6.7 26 378-409 177-202 (228)
73 2f91_A Hepatopancreas trypsin; 94.3 0.46 1.6E-05 45.3 12.4 40 367-408 171-211 (237)
74 2r0l_A Hepatocyte growth facto 94.2 0.15 5.2E-06 48.8 8.9 40 367-408 173-213 (248)
75 1fiw_A Beta-acrosin heavy chai 94.2 0.56 1.9E-05 46.6 13.3 42 367-408 181-223 (290)
76 3mhw_U Urokinase-type plasmino 94.2 0.089 3E-06 49.9 7.1 30 377-408 191-220 (247)
77 3h7t_A Group 3 allergen smipp- 94.2 0.057 1.9E-06 50.8 5.7 37 367-409 168-205 (235)
78 2oq5_A Transmembrane protease, 94.1 0.3 1E-05 46.3 10.7 30 378-408 176-205 (232)
79 1iau_A Granzyme B; hydrolase-h 94.1 0.16 5.4E-06 48.2 8.7 34 368-407 166-200 (227)
80 1cgh_A Cathepsin G; inflammati 93.9 0.094 3.2E-06 49.8 6.7 35 368-408 164-199 (224)
81 3beu_A Trypsin, SGT; beta shee 93.9 0.37 1.3E-05 45.2 10.8 58 368-435 156-214 (224)
82 1si5_H Scatter factor, hepatoc 93.9 0.34 1.2E-05 46.3 10.7 29 378-408 173-201 (240)
83 2asu_B Hepatocyte growth facto 93.9 0.19 6.5E-06 48.0 8.9 39 368-408 161-200 (234)
84 1azz_A Collagenase; complex (s 93.9 0.14 4.9E-06 48.7 7.9 35 368-408 162-196 (226)
85 2jde_A Urokinase-type plasmino 93.8 0.13 4.5E-06 50.0 7.7 30 377-408 214-243 (276)
86 1t8o_A Chymotrypsin A; chymotr 93.8 0.42 1.4E-05 46.0 11.1 30 378-409 189-218 (245)
87 3bg8_A Coagulation factor XIA 93.6 0.4 1.4E-05 45.7 10.7 39 368-408 171-210 (238)
88 1bru_P Elastase, PPE; serine p 93.5 0.42 1.4E-05 45.8 10.5 41 367-408 171-211 (241)
89 1yc0_A Hepatocyte growth facto 93.3 0.26 8.8E-06 48.5 8.9 40 367-408 208-248 (283)
90 3h5c_B Vitamin K-dependent pro 93.3 0.11 3.9E-06 51.9 6.4 24 380-405 266-289 (317)
91 1ym0_A Fibrinotic enzyme compo 93.1 0.73 2.5E-05 43.6 11.4 47 378-435 182-228 (238)
92 1aut_C Activated protein C; se 93.0 0.78 2.7E-05 44.1 11.6 40 367-408 173-213 (250)
93 1elt_A Elastase; serine protei 92.8 0.35 1.2E-05 45.9 8.9 38 368-408 172-209 (236)
94 1orf_A Granzyme A; hydrolase-h 92.8 0.83 2.9E-05 43.4 11.5 25 378-408 178-202 (234)
95 1ddj_A Plasminogen; catalytic 92.5 0.56 1.9E-05 45.0 9.9 40 367-408 179-219 (247)
96 1fon_A Procarboxypeptidase A-S 92.4 0.4 1.4E-05 45.7 8.6 39 368-408 172-210 (240)
97 1vcp_A Semliki forest virus ca 92.4 0.16 5.3E-06 46.5 5.2 29 378-411 95-123 (149)
98 1gvk_B Elastase 1, peptide inh 92.3 0.63 2.1E-05 44.4 9.9 39 368-408 172-210 (240)
99 1svp_A Sindbis virus capsid pr 92.2 0.16 5.6E-06 47.0 5.2 29 378-411 104-132 (161)
100 1md8_A C1R complement serine p 92.1 0.58 2E-05 47.6 9.8 42 367-408 262-304 (329)
101 1ep5_B Capsid protein C, coat 92.0 0.19 6.4E-06 46.4 5.3 29 378-411 102-130 (157)
102 2yew_A Capsid protein, coat pr 91.9 0.13 4.4E-06 51.1 4.5 29 378-411 199-227 (253)
103 2hlc_A Collagenase; serine pro 91.9 0.33 1.1E-05 45.9 7.3 37 368-408 164-200 (230)
104 2vnt_A Urokinase-type plasmino 91.8 0.6 2.1E-05 45.1 9.2 32 376-409 213-244 (276)
105 2f9n_A Alpha I tryptase; serin 91.8 0.59 2E-05 44.7 8.9 38 368-408 179-216 (245)
106 1lvm_A Catalytic domain of the 91.7 1 3.5E-05 44.9 10.7 72 327-411 109-182 (229)
107 1elv_A Complement C1S componen 91.5 1.8 6E-05 43.7 12.6 41 368-408 261-302 (333)
108 1pyt_D TC, PCPA-TC, chymotryps 91.5 0.65 2.2E-05 44.7 9.0 40 367-408 183-222 (251)
109 2jkh_A Activated factor XA hea 91.5 1.3 4.5E-05 42.1 11.0 39 368-408 168-207 (241)
110 1zjk_A Mannan-binding lectin s 91.4 0.9 3.1E-05 47.0 10.5 41 367-407 332-373 (403)
111 1kxf_A Sindbis virus capsid pr 91.2 0.23 7.7E-06 49.7 5.3 29 378-411 209-237 (264)
112 1m9u_A Earthworm fibrinolytic 90.5 0.66 2.3E-05 44.1 7.9 37 367-406 173-210 (241)
113 1rtf_B (TC)-T-PA, two chain ti 90.3 0.89 3.1E-05 43.4 8.7 29 378-408 197-225 (252)
114 1gpz_A Complement C1R componen 90.2 1.9 6.6E-05 44.3 11.7 41 368-408 331-372 (399)
115 4agk_A Capsid protein, coat pr 89.7 0.39 1.3E-05 44.3 5.3 29 378-411 103-131 (158)
116 4dur_A Plasminogen, serine pro 89.7 0.72 2.5E-05 53.0 8.7 40 367-408 723-763 (791)
117 2wph_S Coagulation factor IXA 89.6 2.3 7.8E-05 40.2 10.8 40 367-408 167-207 (235)
118 2bz6_H Blood coagulation facto 89.3 1.1 3.7E-05 43.0 8.4 39 368-408 175-214 (254)
119 3fan_A Non-structural protein; 88.7 0.22 7.5E-06 49.1 3.0 28 378-410 121-148 (213)
120 1z8g_A Serine protease hepsin; 88.2 3.6 0.00012 42.4 11.9 42 367-408 290-334 (372)
121 2pka_B Kallikrein A; serine pr 83.6 3.5 0.00012 36.8 8.0 34 368-407 87-121 (152)
122 2b9l_A Prophenoloxidase activa 82.8 3.3 0.00011 43.4 8.6 42 367-408 315-357 (394)
123 2xrc_A Human complement factor 82.7 4.5 0.00015 44.3 9.9 30 378-408 501-530 (565)
124 2xxl_A GRAM-positive specific 82.0 6.6 0.00022 41.3 10.5 45 367-411 301-349 (408)
125 2f83_A Coagulation factor XI; 74.5 1.9 6.3E-05 48.0 3.8 29 378-408 569-597 (625)
126 4dcd_A Protease 3C, genome pol 69.2 48 0.0016 32.0 11.8 36 365-410 139-174 (190)
127 2hrv_A 2A cysteine proteinase; 68.4 7.8 0.00027 36.0 5.8 38 378-435 100-137 (142)
128 1cqq_A Type 2 rhinovirus 3C pr 66.3 3.8 0.00013 39.1 3.4 26 378-409 141-166 (180)
129 2hal_A Hepatitis A protease 3C 62.6 4.1 0.00014 39.7 2.9 31 378-409 166-196 (212)
130 1z8r_A Coxsackievirus B4 polyp 61.9 7.8 0.00027 36.8 4.6 38 378-435 120-157 (166)
131 2olg_A Pro-phenoloxidase activ 59.0 22 0.00076 34.3 7.5 41 367-408 211-251 (278)
132 3zve_A 3C protease; hydrolase, 56.0 49 0.0017 31.8 9.2 36 365-410 132-167 (190)
133 2bhg_A Foot-and-mouth disease 50.8 7.3 0.00025 37.8 2.5 30 378-409 158-187 (209)
134 1p3c_A Glutamyl-endopeptidase; 50.5 9.9 0.00034 35.3 3.3 26 378-408 165-190 (215)
135 1yph_C Chymotrypsin A, chain B 49.9 20 0.00067 31.0 4.9 18 224-247 29-46 (131)
136 3qzr_A 3C protein; chymotrypsi 49.0 64 0.0022 31.1 8.7 35 366-410 137-171 (187)
137 3rm2_H Thrombin heavy chain; s 46.4 25 0.00085 33.0 5.4 31 378-408 199-229 (259)
138 1yph_E Chymotrypsin A, chain C 45.9 21 0.00071 29.6 4.2 47 378-435 41-87 (97)
139 2ijd_1 Picornain 3C, RNA-direc 45.6 25 0.00085 39.5 6.0 34 366-409 133-166 (644)
140 1arb_A Achromobacter protease 42.5 39 0.0013 33.6 6.3 51 378-439 188-238 (268)
141 2qy0_B Complement C1R subcompo 41.4 61 0.0021 30.3 7.3 42 367-408 173-215 (242)
142 2bdy_A Thrombin; thrombin, com 34.4 45 0.0016 32.5 5.3 31 378-408 229-259 (289)
143 3e90_B NS3 protease; trypsin-l 32.7 21 0.0007 34.8 2.4 19 381-404 136-154 (198)
144 2ggv_B NS3, non-structural pro 32.5 19 0.00065 34.7 2.1 20 381-405 131-150 (185)
145 4f4o_C Haptoglobin; globin fol 31.9 50 0.0017 33.8 5.3 58 368-435 279-337 (347)
146 3u1j_B Serine protease NS3; se 30.3 23 0.0008 34.2 2.3 19 381-404 141-159 (191)
147 2fp7_B Serine protease NS3; fl 29.7 17 0.00059 34.7 1.3 19 381-404 117-135 (172)
148 3cp7_A Alkaline serine proteas 29.1 26 0.00088 33.2 2.4 26 381-408 166-191 (218)
149 3lkw_A Fusion protein of nonst 27.5 26 0.00087 35.0 2.1 19 381-404 182-200 (236)
150 2fom_B Polyprotein; flavivirus 27.3 19 0.00065 34.8 1.1 19 381-404 132-150 (185)
151 2b0f_A Picornain 3C (protease 25.3 2.1E+02 0.0071 27.3 7.9 35 365-409 131-165 (182)
152 3q3y_A HEVB EV93 3C protease; 22.2 2.5E+02 0.0084 27.2 7.8 35 366-410 135-169 (191)
153 3nxp_A Prethrombin-1; alloster 20.5 70 0.0024 33.4 3.9 31 378-408 364-394 (424)
No 1
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...
Probab=99.88 E-value=2.6e-22 Score=193.98 Aligned_cols=178 Identities=22% Similarity=0.287 Sum_probs=128.3
Q ss_pred ceeeeEEEEEeCCCCceeEEEecCceeccCCCCCCCCCCCCCCcccccccCCCccccccccccC-CCccccccccccccc
Q 040739 219 TYGTLGAIVKSQTGSRQVGFLTNRHVAVDLDYPNQKMFHPLPPTLGPGVYLGAVERATSFHHRR-PLTFVRADGAFIPFA 297 (594)
Q Consensus 219 taGTLGclVtD~~G~~~~yiLTNnHVla~~n~~~~~~~~pgdpILQPg~~DGG~~rd~~FIp~~-p~N~VDaD~AIi~va 297 (594)
..||+||+|+++ +..|||||+||..... ++. .|+ ....+++... |.+ |+|++++.
T Consensus 15 ~~CT~Gf~v~~~---~~~~ilTa~Hc~~~~~-----------~v~----~~~--~~~g~vv~~~~~~~----D~Avi~i~ 70 (198)
T 2h5c_A 15 SLCSVGFSVTRG---ATKGFVTAGHCGTVNA-----------TAR----IGG--AVVGTFAARVFPGN----DRAWVSLT 70 (198)
T ss_dssp EEEECCEEEEET---TEEEEEECGGGCCTTC-----------EEE----ETT--EEEEEEEEEECSBS----CEEEEEEC
T ss_pred CCCCcCEEEecC---CeeEEEECcccCCCCC-----------EEE----eCC--cEEEEEEecCCCCC----CEEEEEeC
Confidence 589999999986 4789999999987622 333 222 1113444433 555 66999986
Q ss_pred cCCCCCccccccccccccCcceeecccCcccccCCCeEEEEeecccceEEEEEEEEEEEeCCCCeEEEEEEEEECCCCCC
Q 040739 298 DDFDMSTVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGRSSGLTTGTVLAYALEYNDEKGICFLTDFLVVGENQQT 377 (594)
Q Consensus 298 ~~~d~s~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGRTTGlT~G~Itai~V~y~~~~G~~~f~dqIVt~~~g~~ 377 (594)
... ...+.|.. .|. .+.+.+...+.+|+.|+|+|++||+|+|+|.+++....+..| .|++++.+..
T Consensus 71 ~~~---~~~~~v~~---~g~--~~~v~g~~~~~vG~~V~~~G~~tg~t~G~V~~~~~~~~~~~g--~~~~~i~t~~---- 136 (198)
T 2h5c_A 71 SAQ---TLLPRVAN---GSS--FVTVRGSTEAAVGAAVCRSGRTTGYQCGTITAKNVTANYAEG--AVRGLTQGNA---- 136 (198)
T ss_dssp TTS---EEEEEEEE---TTE--EEECCBCCCCCTTCEEEEEETTTEEEEEEEEEEEEEEEETTE--EEEEEEEECS----
T ss_pred CCC---ccCceEec---CCc--eEEecCcccCCCCCeEEEeecCcceEEEEEEeeeeEEEeCCC--eEeeeEEecc----
Confidence 432 22344543 121 123456678999999999999999999999999854443334 3789999887
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecC-----CCCCccccccCCCCCcceEeechHHHHhhcCCeEEcC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGT-----ANRGRLKLKIGQPPENWTSGVDLGRLLNLLELDLITT 445 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs-----~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~L~V~Lvt~ 445 (594)
++.+||||++|+ +.++++|||++++. .+|+ +...++.+||+||..+|++|+|+|+|.
T Consensus 137 ~~~~GDSGGPl~-----~~~g~~vGI~s~~~~~~~~~~c~------~~~~~g~~f~~Pi~~vl~~~gv~l~t~ 198 (198)
T 2h5c_A 137 CMGRGDSGGSWI-----TSAGQAQGVMSGGNVQSNGNNCG------IPASQRSSLFERLQPILSQYGLSLVTG 198 (198)
T ss_dssp CCBTTCTTCEEE-----CTTCBEEEEEEEECCCTTSBSTT------SCGGGCCEEEEEHHHHHHHHTCEECCC
T ss_pred cCCCCcceeEEE-----eeCCEEEEEEEeecCccCCCccc------cccCCceEEEEEHHHHHHHCCcEEecC
Confidence 899999999999 77889999999986 3220 001145799999999999999999984
No 2
>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}
Probab=99.84 E-value=1.9e-20 Score=179.55 Aligned_cols=173 Identities=24% Similarity=0.293 Sum_probs=121.8
Q ss_pred ceeeeEEEEEeCCCCceeEEEecCceeccCCCCCCCCCCCCCCcccccccCCCccccccccccCCCcccccccccccccc
Q 040739 219 TYGTLGAIVKSQTGSRQVGFLTNRHVAVDLDYPNQKMFHPLPPTLGPGVYLGAVERATSFHHRRPLTFVRADGAFIPFAD 298 (594)
Q Consensus 219 taGTLGclVtD~~G~~~~yiLTNnHVla~~n~~~~~~~~pgdpILQPg~~DGG~~rd~~FIp~~p~N~VDaD~AIi~va~ 298 (594)
..||+||+|+++ ...|||||+||..... ++.. ..|.+. ...| |.+ |+|++++..
T Consensus 14 ~~CT~Gf~v~~~---~~~~ilTa~Hc~~~g~-----------~v~~---~~g~v~-~~~~----~~~----D~Alikl~~ 67 (186)
T 2pfe_A 14 YRCSIGFSVRQG---SQTGFATAGHCGSTGT-----------RVSS---PSGTVA-GSYF----PGR----DMGWVRITS 67 (186)
T ss_dssp EEEECCEEEEET---TEEEEEECGGGCCTTC-----------EEBT---TTEEEE-EEEC----SBS----CEEEEEECT
T ss_pred CcEEeeEEEEcC---CeeEEEEChhhCCCCC-----------EEEE---eeEEEE-ecCC----CCC----CEEEEEeCC
Confidence 689999999986 4689999999986632 2221 112110 1122 555 779999864
Q ss_pred CCCCCccccccccccccCcceeecccCcccccCCCeEEEEeecccceEEEEEEEEEEEeCCCCeEEEEEEEEECCCCCCC
Q 040739 299 DFDMSTVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGRSSGLTTGTVLAYALEYNDEKGICFLTDFLVVGENQQTF 378 (594)
Q Consensus 299 ~~d~s~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGRTTGlT~G~Itai~V~y~~~~G~~~f~dqIVt~~~g~~F 378 (594)
.. ..++.|...+ |. .+.+.+...+.+|+.|+|+|++||+|+|+|++++.++++..+. |.+++.+.. +
T Consensus 68 ~~---~~~~~v~~~~--g~--~~~i~~~~~~~vG~~vc~~G~~tG~t~G~vs~~~~tv~~~~~~--~~~~~~~~~----c 134 (186)
T 2pfe_A 68 AD---TVTPLVNRYN--GG--TVTVTGSQEAATGSSVCRSGATTGWRCGTIQSKNQTVRYAEGT--VTGLTRTTA----C 134 (186)
T ss_dssp TS---EEEEEEECSS--SC--EEECCBCCCCCTTCEEEEEETTTEEEEEEEEEEEEEEEETTEE--EEEEEEESC----C
T ss_pred Cc---ccccceeccC--Cc--eEecCCCCCCCCCCeEEEEEeCCceEEEEEEEEeeeEEeCCce--EeceEeccE----E
Confidence 31 2234444211 11 1234466678999999999999999999999998555433333 677777665 7
Q ss_pred CCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHHhhcCCeEEcC
Q 040739 379 DLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLNLLELDLITT 445 (594)
Q Consensus 379 S~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~L~V~Lvt~ 445 (594)
..+||||++++ . +++++||++++...++ ..+.++|+||..+|+.|+|+|+|.
T Consensus 135 ~~~GDSGgpl~-----~-~~~~vGi~s~g~~~c~---------~~~~~~~~pi~~~l~~~gv~l~t~ 186 (186)
T 2pfe_A 135 AEGGDSGGPWL-----T-GSQAQGVTSGGTGDCR---------SGGITFFQPINPLLSYFGLQLVTG 186 (186)
T ss_dssp CCTTCTTCEEE-----E-TTEEEEEEEEEEEETT---------TEEEEEEEEHHHHHHHHTCEECCC
T ss_pred ecCCCccCeEE-----E-CCEEEEEEeecCCCCC---------CCCcEEEEEHHHHHHHCCeEEecC
Confidence 88999999999 2 5689999998764331 134699999999999999999984
No 3
>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1
Probab=99.83 E-value=2.7e-20 Score=177.37 Aligned_cols=176 Identities=20% Similarity=0.243 Sum_probs=122.3
Q ss_pred cceeeeEEEEEeCCCCceeEEEecCceeccCCCCCCCCCCCCCCcccc-cccCCCccccccccccCCCcccccccccccc
Q 040739 218 ETYGTLGAIVKSQTGSRQVGFLTNRHVAVDLDYPNQKMFHPLPPTLGP-GVYLGAVERATSFHHRRPLTFVRADGAFIPF 296 (594)
Q Consensus 218 ~taGTLGclVtD~~G~~~~yiLTNnHVla~~n~~~~~~~~pgdpILQP-g~~DGG~~rd~~FIp~~p~N~VDaD~AIi~v 296 (594)
...||+||+|++. +..|||||+||....+.. ..++.+ +| +..++ .+| |.| |+|++++
T Consensus 11 ~~~CT~Gfiv~~~---g~~~ilT~~Hv~~~~~~v-----~~~~~~-~~~g~~~~-----~~~----~~~----DiAlikl 68 (187)
T 1hpg_A 11 GSRCSAAFNVTKG---GARYFVTAGHCTNISANW-----SASSGG-SVVGVREG-----TSF----PTN----DYGIVRY 68 (187)
T ss_dssp TEEEECCEEEEET---TEEEEEECHHHHTTCSEE-----ESSTTC-CEEEEEEE-----EEC----SBS----CEEEEEE
T ss_pred CCcCcceEEEEEC---CeeEEEECcccCCCCCeE-----EeCCCc-eeEEEEeC-----ccC----CCC----CEEEEEe
Confidence 3689999999995 478999999999765432 111222 22 22222 344 445 7799998
Q ss_pred ccCCCCCccccccccccccCcceeecccCcccccCCCeEEEEeecccceEEEEEEEEEEEeCCCCeEEEEEEEEECCCCC
Q 040739 297 ADDFDMSTVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGRSSGLTTGTVLAYALEYNDEKGICFLTDFLVVGENQQ 376 (594)
Q Consensus 297 a~~~d~s~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGRTTGlT~G~Itai~V~y~~~~G~~~f~dqIVt~~~g~ 376 (594)
..... .+.+..++. | ..+.+.+...+.+|+.|+|+|++||+|+|+|++++.++.+..+ .+.++|.+..
T Consensus 69 ~~~~~----~~~~v~~~~-g--~~~~i~~~~~~~~G~~v~~~G~~~g~t~G~v~~~~~~v~~~~~--~~~~~i~t~~--- 136 (187)
T 1hpg_A 69 TDGSS----PAGTVDLYN-G--STQDISSAANAVVGQAIKKSGSTTKVTSGTVTAVNVTVNYGDG--PVYNMVRTTA--- 136 (187)
T ss_dssp CSSCC----CCSEEECSS-S--CEEECCEECCCCTTCEEEEEETTTEEEEEEEEEEEEEEEETTE--EEEEEEEECC---
T ss_pred CCCCC----cCceEEecC-C--ceeeeccccCCCCCCEEEEEEcCCCEeEEEEEEeEEEEEeCCC--eEeeeEEecc---
Confidence 65221 112222111 1 1122334567899999999999999999999999855443333 3788998877
Q ss_pred CCCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHHhhcCCeEE
Q 040739 377 TFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLNLLELDLI 443 (594)
Q Consensus 377 ~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~L~V~Lv 443 (594)
++.+||||++++ +. +++|||++++...++ ....++|.||..+|++|+|+|+
T Consensus 137 -~~~~GdSGgpl~-----~~-~~~vGi~s~~~~~~~---------~~~~~~~~~i~~~~~~lgv~l~ 187 (187)
T 1hpg_A 137 -CSAGGDSGGAHF-----AG-SVALGIHSGSSGCSG---------TAGSAIHQPVTEALSAYGVTVY 187 (187)
T ss_dssp -CCCTTCTTCEEE-----ET-TEEEEEEEEESCCBT---------TBCCCEEEEHHHHHHHHTCEEC
T ss_pred -ccCCCCCCCeEE-----EC-CEEEEEEEeeCCCCC---------CCCceEEEEHHHHHHHcCcEEC
Confidence 789999999999 44 499999998875441 1346899999999999999985
No 4
>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}
Probab=99.83 E-value=3.1e-20 Score=177.95 Aligned_cols=175 Identities=23% Similarity=0.277 Sum_probs=123.1
Q ss_pred ceeeeEEEEEeCCCCceeEEEecCceeccCCCCCCCCCCCCCCcccccccCCCccccccccccC-CCccccccccccccc
Q 040739 219 TYGTLGAIVKSQTGSRQVGFLTNRHVAVDLDYPNQKMFHPLPPTLGPGVYLGAVERATSFHHRR-PLTFVRADGAFIPFA 297 (594)
Q Consensus 219 taGTLGclVtD~~G~~~~yiLTNnHVla~~n~~~~~~~~pgdpILQPg~~DGG~~rd~~FIp~~-p~N~VDaD~AIi~va 297 (594)
..||+||+|++.+| ..|||||+||..+.. ++.+.. +.| +++... |.+ |+|++++.
T Consensus 13 ~~CTsGf~v~~~~G--~~~ilTa~Hc~~~g~-----------~v~~~d-~~g------~v~~~~~p~~----DiAlikl~ 68 (188)
T 2oua_A 13 GRCSVGFAATNASG--QPGFVTAGHCGSVGT-----------QVSIGN-GRG------VFERSVFPGN----DAAFVRGT 68 (188)
T ss_dssp SEEECCEEEECTTC--CEEEEECGGGCCTTC-----------EEEETT-EEE------EEEEEECSBS----CEEEEEEE
T ss_pred CcEecCEEEEeCCC--CEEEEECcccCCCCC-----------EEEecC-ceE------EEEeeCCCCC----CEEEEEeC
Confidence 68999999997544 489999999986522 233211 111 222111 555 77999986
Q ss_pred cCCCCCccccccccccccCcceeecccCcccccCCCeEEEEeecccceEEEEEEEEEEEeCCCCeEEEEEEEEECCCCCC
Q 040739 298 DDFDMSTVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGRSSGLTTGTVLAYALEYNDEKGICFLTDFLVVGENQQT 377 (594)
Q Consensus 298 ~~~d~s~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGRTTGlT~G~Itai~V~y~~~~G~~~f~dqIVt~~~g~~ 377 (594)
... ..++.|..+|.. ..+.+.+...+.+|+.|+|+|++||+|+|+|++++.++.+..+ .+.+++.+..
T Consensus 69 ~~~---~~~~~v~~~g~~---~~~~l~~~~~~~vG~~v~~~G~~tG~t~G~v~~~~~~v~~~~~--~~~~~~~~~~---- 136 (188)
T 2oua_A 69 SNF---TLTNLVSRYNSG---GYATVSGSSTAPIGSQVCRSGSTTGWYCGTIQARNQTVSYPQG--TVHSLTRTSV---- 136 (188)
T ss_dssp ESC---EEEEEEECGGGC---SEEECCBCCCCCTTCEEEEEETTTEEEEEEEEEEEEEEEETTE--EEEEEEEESC----
T ss_pred CCC---ccccceeecCCc---ceEeccCccCCCCCCeEEEEEcCCCeEEEEEEEEeeEEEeCCC--cEeeeEeeee----
Confidence 532 223455443322 2223445567899999999999999999999999855544333 4667777766
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHHhhcCCeEEc
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLNLLELDLIT 444 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~L~V~Lvt 444 (594)
+..+||||++++ . ++++|||++++...++ ..+.++|+||..+|++|+|+|+|
T Consensus 137 ~~~~GDSGgpl~-----~-~~~~vGi~s~~~~~~~---------~~~~~~~~pi~~~l~~~gv~l~t 188 (188)
T 2oua_A 137 CAEPGDSGGSFI-----S-GTQAQGVTSGGSGNCR---------TGGTTFYQEVNPMLNSWNLRLRT 188 (188)
T ss_dssp CCCTTCTTCEEE-----E-TTEEEEEEEEEEEETT---------TEEEEEEEESHHHHHHTTCEECC
T ss_pred ecCCCCccceEE-----E-CCEEEEEEeccCCCCC---------CCCceEEEEHHHHHHHcCcEEeC
Confidence 788999999999 2 5689999998764331 13458999999999999999986
No 5
>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A
Probab=99.77 E-value=1.4e-18 Score=162.99 Aligned_cols=180 Identities=21% Similarity=0.258 Sum_probs=121.9
Q ss_pred CCCCCccCCCcccCcccceeeeEEEEEeCCCCceeEEEecCceeccCCCCCCCCCCCCCCcccccccCCCcccccccccc
Q 040739 202 RGGDPSIGSGSQVASQETYGTLGAIVKSQTGSRQVGFLTNRHVAVDLDYPNQKMFHPLPPTLGPGVYLGAVERATSFHHR 281 (594)
Q Consensus 202 ~GG~~SIGggs~~~~~~taGTLGclVtD~~G~~~~yiLTNnHVla~~n~~~~~~~~pgdpILQPg~~DGG~~rd~~FIp~ 281 (594)
+||. .|.. ....||+||+|+|. +..|+|||+||....+.. . .|.. ....|
T Consensus 2 ~gG~-~~~~------~~~~ct~G~~v~~~---~~~~vlTaaHc~~~~~~~-----~-----------~G~~-~~~~~--- 51 (181)
T 2sga_A 2 AGGE-AITT------GGSRCSLGFNVSVN---GVAHALTAGHCTNISASW-----S-----------IGTR-TGTSF--- 51 (181)
T ss_dssp CBTC-EEEE------TTEEEECCEEEEET---TEEEEEECHHHHTTCSEE-----T-----------TEEE-EEEEC---
T ss_pred cCcc-EEEe------CCCcEeccEEEEEC---CceEEEECcccCCCCCce-----e-----------ecce-eCCcC---
Confidence 5664 5542 23589999999985 478999999998653311 1 1110 01222
Q ss_pred CCCccccccccccccccCCCCCccccccccccccCcceeecccCcccccCCCeEEEEeecccceEEEEEEEEEEEeCCCC
Q 040739 282 RPLTFVRADGAFIPFADDFDMSTVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGRSSGLTTGTVLAYALEYNDEKG 361 (594)
Q Consensus 282 ~p~N~VDaD~AIi~va~~~d~s~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGRTTGlT~G~Itai~V~y~~~~G 361 (594)
+.| |+|++++.++... +..|..+. |.. ..+.+...+.+|+.|+|+|+++++|.|.|.++++.+....+
T Consensus 52 -~~~----DiAlikl~~~~~~---~~~v~~i~--~~~--~~~~~~~~~~~G~~v~~~G~~~~~t~G~v~~~~~~v~~~~~ 119 (181)
T 2sga_A 52 -PNN----DYGIIRHSNPAAA---DGRVYLYN--GSY--QDITTAGNAFVGQAVQRSGSTTGLRSGSVTGLNATVNYGSS 119 (181)
T ss_dssp -SBS----CEEEEEESCGGGC---CCEEECSS--SCE--EECCEECCCCTTCEEEEEETTTEEEEEEEEEEEEEEECGGG
T ss_pred -CCC----CEEEEEccCCCcc---cceEEecC--Ccc--eeecccccCCCCCEEEEeecCCCccEEEEEEeEEEEECCCC
Confidence 455 8899998753211 12344320 000 01123356789999999999999999999999866544333
Q ss_pred eEEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHHhhcCCe
Q 040739 362 ICFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLNLLELD 441 (594)
Q Consensus 362 ~~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~L~V~ 441 (594)
. .+.+++.+.. ++.+||||++++ +.+ ++|||+++|...++ ....++|.||..+++.|+|+
T Consensus 120 ~-~~~~~i~~~~----c~~~GDSGGPlv-----~~~-~~vGI~s~g~~~~~---------~~~~~v~~~v~~~~~~l~v~ 179 (181)
T 2sga_A 120 G-IVYGMIQTNV----CAQPGDSGGSLF-----AGS-TALGLTSGGSGNCR---------TGGTTFYQPVTEALSAYGAT 179 (181)
T ss_dssp C-EEEEEEEESC----CCCTTCTTCEEE-----ETT-EEEEEEEEEEEETT---------TEEEEEEEEHHHHHHHHTEE
T ss_pred C-EEeeeEeccc----ccCCCCCCCEEE-----ECC-EEEEEEEeeCCCCc---------CCCceEEEEHHHHHHhcCcE
Confidence 3 4677776654 788999999999 444 99999998864331 13458999999999999999
Q ss_pred EE
Q 040739 442 LI 443 (594)
Q Consensus 442 Lv 443 (594)
|+
T Consensus 180 l~ 181 (181)
T 2sga_A 180 VL 181 (181)
T ss_dssp EC
T ss_pred EC
Confidence 85
No 6
>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}
Probab=99.72 E-value=1.3e-17 Score=160.17 Aligned_cols=170 Identities=24% Similarity=0.343 Sum_probs=117.2
Q ss_pred ceeeeEEEEEeCCCCceeEEEecCceeccCCCCCCCCCCCCCCcccccccCCCccccccccccCCCcccccccccccccc
Q 040739 219 TYGTLGAIVKSQTGSRQVGFLTNRHVAVDLDYPNQKMFHPLPPTLGPGVYLGAVERATSFHHRRPLTFVRADGAFIPFAD 298 (594)
Q Consensus 219 taGTLGclVtD~~G~~~~yiLTNnHVla~~n~~~~~~~~pgdpILQPg~~DGG~~rd~~FIp~~p~N~VDaD~AIi~va~ 298 (594)
..||+|++|++ |||||+||..... .+.. .||.+ ....| |.+ |+|++++..
T Consensus 15 ~~CT~Gf~~~~-------~ilTa~Hc~~~~~-----------~v~~---~dg~v-~~~~~----~~~----DiAlikl~~ 64 (189)
T 2ea3_A 15 SRCSIGFAVNG-------GFITAGHCGRTGA-----------TTAN---PTGTF-AGSSF----PGN----DYAFVRTGA 64 (189)
T ss_dssp EEEECCEEETT-------EEEECGGGCCTTC-----------EEET---TTEEE-EEEEC----SBS----CEEEEEECT
T ss_pred CCCccCEEccC-------eEEEchhcCCCCC-----------EEEe---CCcEE-EeeCC----CCC----CEEEEEECC
Confidence 58999999853 8999999986522 2221 12221 11223 455 779999875
Q ss_pred CCCCCccccccccccccCcceeecccCcccccCCCeEEEEeecccceEEEEEEEEEEEeCCCCeEEEEEEEEECCCCCCC
Q 040739 299 DFDMSTVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGRSSGLTTGTVLAYALEYNDEKGICFLTDFLVVGENQQTF 378 (594)
Q Consensus 299 ~~d~s~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGRTTGlT~G~Itai~V~y~~~~G~~~f~dqIVt~~~g~~F 378 (594)
.. ..++.|..++ |. .+.+.+...+.+|+.|+|+|++||+|+|+|.+++.++.+..+. +.+++.+.. +
T Consensus 65 ~~---~~~~~v~~~~--g~--~v~l~~s~~~~vG~~v~~~G~~tG~t~G~Vs~~~~~v~~~~~~--~~~~~~~~~----~ 131 (189)
T 2ea3_A 65 GV---NLLAQVNNYS--GG--RVQVAGHTAAPVGSAVCRSGSTTGWHCGTITALNSSVTYPEGT--VRGLIRTTV----C 131 (189)
T ss_dssp TC---EEEEEEECSS--SC--EEECCBCCCCCTTCEEEEEETTTEEEEEEEEEEEEEEEETTEE--EEEEEEESC----C
T ss_pred CC---ccccceEecC--Cc--eeecCCCcCCCCCCEEEEEEeCCccEEEEEEecceEEEeCCcc--CcceEEeee----e
Confidence 32 2234443221 11 1223455678999999999999999999999998554433232 567777666 7
Q ss_pred CCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHHhhcCCeEEcCC
Q 040739 379 DLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLNLLELDLITTD 446 (594)
Q Consensus 379 S~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~L~V~Lvt~~ 446 (594)
..+||||++++ . ++++|||++++...++ ....++|.||..+|+.|+|+|+|+.
T Consensus 132 ~~~GDSGgpl~-----~-~~~~vGi~s~~~~~c~---------~~~~~~~~pi~~~l~~~gv~l~t~~ 184 (189)
T 2ea3_A 132 AEPGDSGGSLL-----A-GNQAQGVTSGGSGNCR---------TGGTTFFQPVNPILQAYGLRMITTD 184 (189)
T ss_dssp CCTTCTTCEEE-----E-TTEEEEEEEEEEEETT---------TEEEEEEEEHHHHHHHHTCCBCCC-
T ss_pred ccCCCccCeEE-----E-CCEEEEEEeecCCCCC---------CCCcEEEEEHHHHHHHCCeEEEECC
Confidence 88999999999 3 5789999988764331 1346899999999999999999854
No 7
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...
Probab=99.64 E-value=2.1e-15 Score=141.55 Aligned_cols=183 Identities=24% Similarity=0.305 Sum_probs=119.3
Q ss_pred CCCCCccCCCcccCcccceeeeEEEEEeCCCCceeEEEecCceeccCCCCCCCCCCCCCCcccccccCCCcccccccccc
Q 040739 202 RGGDPSIGSGSQVASQETYGTLGAIVKSQTGSRQVGFLTNRHVAVDLDYPNQKMFHPLPPTLGPGVYLGAVERATSFHHR 281 (594)
Q Consensus 202 ~GG~~SIGggs~~~~~~taGTLGclVtD~~G~~~~yiLTNnHVla~~n~~~~~~~~pgdpILQPg~~DGG~~rd~~FIp~ 281 (594)
+||. .|.. ....||+||+|++. ...|+|||+||....+.. .......++ .|.. ....|
T Consensus 2 ~gG~-~i~~------~~~~ct~Gf~v~~~---~~~~ilTaaHcv~~~~~~-----~v~~~~~~~---~g~~-~~~~~--- 59 (185)
T 2qa9_E 2 SGGD-AIYS------STGRCSLGFNVRSG---STYYFLTAGHCTDGATTW-----WANSARTTV---LGTT-SGSSF--- 59 (185)
T ss_dssp CTTC-EEEC------SSCEEECCEEEEET---TEEEEEECHHHHTTCSEE-----ESSTTSCSE---EEEE-EEEEC---
T ss_pred cCce-EEEe------CCCcEeccEEEEEC---CceEEEECcccCCCCCcE-----EecCCCceE---eEEE-ecccc---
Confidence 5674 5542 23689999999985 478999999998775431 000000011 0110 01122
Q ss_pred CCCcccccccccccccc-CCCCCccccccccccccCcceeecccCcccccCCCeEEEEeecccceEEEEEEEEEEEeCCC
Q 040739 282 RPLTFVRADGAFIPFAD-DFDMSTVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGRSSGLTTGTVLAYALEYNDEK 360 (594)
Q Consensus 282 ~p~N~VDaD~AIi~va~-~~d~s~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGRTTGlT~G~Itai~V~y~~~~ 360 (594)
+.| |+||+++.+ +...+ ..+.. +.+.....+..|+.|+++|+++|.|.|++..+.+.+....
T Consensus 60 -~~~----DiAll~l~~~~~~~~---~~v~~---------~~l~~~~~~~~g~~v~~~Gw~~~~~~g~l~~~~~~v~~~~ 122 (185)
T 2qa9_E 60 -PNN----DYGIVRYTNTTIPKD---GTVGG---------QDITSAANATVGMAVTRRGSTTGTHSGSVTALNATVNYGG 122 (185)
T ss_dssp -SBS----CEEEEEECCSSSCCC---CEETT---------EECCEECCCCTTCEEEEEETTTEEEEEEEEEEEEEEECST
T ss_pred -CCC----CEEEEEecCCCcccc---Cccce---------eeeCCcccCCCCCEEEEecCCCceeEeEEEEEEEEEEcCC
Confidence 445 889999876 32221 11111 1122234567899999999999999999999986665433
Q ss_pred CeEEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHHhhcCC
Q 040739 361 GICFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLNLLEL 440 (594)
Q Consensus 361 G~~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~L~V 440 (594)
+. ++.+++.+.. +..+||||++++ +.+ ++|||+++|...+ .+...++|.+|..+++-+++
T Consensus 123 ~~-~~~~~~~~~~----cac~GDSGGPlv-----~~~-~~vGI~s~g~~~~---------~~~~p~vyt~v~~~~~wI~~ 182 (185)
T 2qa9_E 123 GD-VVYGMIRTNV----CAEPGDSGGPLY-----SGT-RAIGLTSGGSGNC---------SSGGTTFFQPVTEALSAYGV 182 (185)
T ss_dssp TC-EEEEEEEESC----CCCTTCTTCEEE-----ETT-EEEEEEEEEEEET---------TTEEEEEEEEHHHHHHHHTC
T ss_pred CC-EEeceEEecc----cCCCCCccceEE-----ECC-EEEEEEEecCCCC---------CCCCcEEEEEHHHHHHhhCc
Confidence 33 3555554444 778999999999 343 9999998876433 12345899999999999999
Q ss_pred eEE
Q 040739 441 DLI 443 (594)
Q Consensus 441 ~Lv 443 (594)
+|+
T Consensus 183 ~l~ 185 (185)
T 2qa9_E 183 SVY 185 (185)
T ss_dssp EEC
T ss_pred EEC
Confidence 874
No 8
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=98.80 E-value=9.4e-08 Score=94.37 Aligned_cols=94 Identities=20% Similarity=0.253 Sum_probs=68.1
Q ss_pred cccCCCeEEEEeeccc----ceEEEEEEEEEEEeCCCCeEEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEEE
Q 040739 328 SSLIGKQVVKVGRSSG----LTTGTVLAYALEYNDEKGICFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGI 403 (594)
Q Consensus 328 ~p~lG~~V~KvGRTTG----lT~G~Itai~V~y~~~~G~~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGL 403 (594)
....|+.|.-+|.-.| +|.|.|+++.-.+....+...+.++|.++. -..+||||++++ +.++++|||
T Consensus 127 ~~~~G~~v~~iG~p~g~~~~vt~Givs~~~r~~~~~~~~~~~~~~i~tda----~i~~G~SGGPLv-----~~~G~vvGI 197 (239)
T 1l1j_A 127 KVKIGEWAIAIGNPLGFQHTVTVGVVSATNRRIPKPDGSGYYVGLIQTDA----AINPGNSGGPLL-----NIHGEVIGI 197 (239)
T ss_dssp GCCTTCEEEEEECTTSSSCEEEEEEEEEEEEEEECTTSSCEEEEEEEESS----CCCTTTTTSEEE-----CSSSEEEEE
T ss_pred CCccccEEEEEECCCCCCCcEEEEEEeccccccccCCCccccCCEEEECC----CCCCCCccHHhc-----cCCCeEEEE
Confidence 4578999999998665 488999988744443222112456777766 578999999999 778999999
Q ss_pred EEecCCCCCccccccCCCCCcceEeechHHHHhhcC
Q 040739 404 IWGGTANRGRLKLKIGQPPENWTSGVDLGRLLNLLE 439 (594)
Q Consensus 404 lfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~L~ 439 (594)
+.++... ++..+..++.|+..+.+.++
T Consensus 198 ~s~~~~~---------~~~~g~~faIP~~~~~~~~~ 224 (239)
T 1l1j_A 198 NTAIVNP---------QEAVNLGFAIPINTVKKFLD 224 (239)
T ss_dssp ECCCSCC---------CSCCSCEEEEEHHHHHHHHG
T ss_pred EeeeecC---------CCcCceEEEEEHHHHHHHHH
Confidence 9877531 12246789999988776554
No 9
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=98.68 E-value=2.5e-07 Score=89.99 Aligned_cols=93 Identities=18% Similarity=0.233 Sum_probs=62.7
Q ss_pred ccccCCCeEEEEeeccc----ceEEEEEEEE-EEEeC--CCCeEEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCc
Q 040739 327 ISSLIGKQVVKVGRSSG----LTTGTVLAYA-LEYND--EKGICFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPR 399 (594)
Q Consensus 327 ~~p~lG~~V~KvGRTTG----lT~G~Itai~-V~y~~--~~G~~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~ 399 (594)
..+..|+.|+-+|.-.| .+.|.|..+. ..... ..+.....+.+.++. ...+||||++++ +.+++
T Consensus 123 ~~~~~G~~v~v~G~p~g~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~GdSGGPLv-----~~~G~ 193 (237)
T 3k6y_A 123 EPAKTGADVVVLGYPGGGNFTATPARIREAIRLSGPDIYGDPEPVTRDVYTIRA----DVEQGDSGGPLI-----DLNGQ 193 (237)
T ss_dssp SCCCTTCEEEEEECGGGCSCEEEEEEEEEEEEEEECCTTCCSSCEEEEEEEEES----CCCTTCTTCEEE-----CTTSC
T ss_pred CCCCCCCEEEEEECCCCCCCccceeEEEeeEeecccccccCCCcccccEEEecC----ccCCCccHHHEE-----CCCCE
Confidence 45678999999996433 5667776654 22111 112113345555555 356899999999 77899
Q ss_pred eEEEEEecCCCCCccccccCCCCCcceEeechHHHHhhcC
Q 040739 400 PIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLNLLE 439 (594)
Q Consensus 400 aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~L~ 439 (594)
+|||++++.... .+..|+.|+..+...|+
T Consensus 194 vvGI~s~~~~~~-----------~~~~~aip~~~v~~~l~ 222 (237)
T 3k6y_A 194 VLGVVFGAAIDD-----------AETGFVLTAGEVAGQLA 222 (237)
T ss_dssp EEEEEEEECSSS-----------TTEEEEEEHHHHHGGGG
T ss_pred EEEEEEeeccCC-----------CcEEEEEEHHHHHHHHH
Confidence 999999876432 35689999988887653
No 10
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=98.56 E-value=2.7e-07 Score=90.19 Aligned_cols=154 Identities=19% Similarity=0.184 Sum_probs=87.1
Q ss_pred EEEEEeCCCCceeEEEecCceeccCCCCCCCCCCCCCCcccccccCCCccccccccccCCCccccccccccccccCCCCC
Q 040739 224 GAIVKSQTGSRQVGFLTNRHVAVDLDYPNQKMFHPLPPTLGPGVYLGAVERATSFHHRRPLTFVRADGAFIPFADDFDMS 303 (594)
Q Consensus 224 GclVtD~~G~~~~yiLTNnHVla~~n~~~~~~~~pgdpILQPg~~DGG~~rd~~FIp~~p~N~VDaD~AIi~va~~~d~s 303 (594)
|++|... | |||||+||+.+.... .+. ..+|.. ...+.+...+.+ |+|++++..+.+..
T Consensus 67 G~iI~~~-G----~VLTaaHvv~~~~~i---------~V~---~~~g~~-~~a~v~~~d~~~----DlAlL~l~~~~~~~ 124 (231)
T 3tjo_A 67 GFIVSED-G----LIVTNAHVVTNKHRV---------KVE---LKNGAT-YEAKIKDVDEKA----DIALIKIDHQGKLP 124 (231)
T ss_dssp EEECSTT-C----EEEEETTTCCSSSEE---------EEE---CTTSCE-EEEEEEEEETTT----TEEEEECCCSSCCC
T ss_pred EEEEeCC-C----EEEEchhcccCCceE---------EEE---cCCCCE-EEEEEEEecCCC----CEEEEEecCCCCCC
Confidence 5666533 2 899999999763321 011 112321 111222223344 88999987432111
Q ss_pred ccccccccccccCcceeecccCcccccCCCeEEEEeeccc----ceEEEEEEEEEEEeCCCCe-EEEEEEEEECCCCCCC
Q 040739 304 TVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGRSSG----LTTGTVLAYALEYNDEKGI-CFLTDFLVVGENQQTF 378 (594)
Q Consensus 304 ~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGRTTG----lT~G~Itai~V~y~~~~G~-~~f~dqIVt~~~g~~F 378 (594)
.+. + ........|+.|+-+|.-.| +|.|.|.++....... +. ....+.+.++. .
T Consensus 125 ----~~~----l--------~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~~-~~~~~~~~~i~~da----~ 183 (231)
T 3tjo_A 125 ----VLL----L--------GRSSELRPGEFVVAIGSPFSLQNTVTTGIVSTTQRGGKEL-GLRNSDMDYIQTDA----I 183 (231)
T ss_dssp ----CCC----B--------CCGGGCCTTCEEEEEEEEETTEEEEEEEEEEECC--------------CCEEESS----C
T ss_pred ----cee----c--------CCcCCCCCCCEEEEEECCCCCCCceeeEEEeecccccccc-ccCCCcccEEEEcC----C
Confidence 111 1 11234578999999998644 4667776654211100 00 00123455555 4
Q ss_pred CCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHHhhc
Q 040739 379 DLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLNLL 438 (594)
Q Consensus 379 S~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~L 438 (594)
..+||||++++ |.++++|||...+.. .+..|+.|+..+.+.|
T Consensus 184 i~~G~SGGPLv-----~~~G~vVGI~s~~~~-------------~g~~~aip~~~i~~~l 225 (231)
T 3tjo_A 184 INYGNAGGPLV-----NLDGEVIGINTLKVT-------------AGISFAIPSDKIKKFL 225 (231)
T ss_dssp CCTTTTTSEEE-----CTTSCEEEEEEEEEE-------------TTEEEEEEHHHHHHHH
T ss_pred cCCCCchhHee-----cCCCeEEEEEeEEec-------------CCeEEEEEHHHHHHHH
Confidence 66899999999 788999999987642 2458899998887654
No 11
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=98.55 E-value=5.7e-07 Score=92.92 Aligned_cols=93 Identities=19% Similarity=0.235 Sum_probs=66.3
Q ss_pred cccCCCeEEEEeecc----cceEEEEEEEEEEEeCC-CCeEEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEE
Q 040739 328 SSLIGKQVVKVGRSS----GLTTGTVLAYALEYNDE-KGICFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIG 402 (594)
Q Consensus 328 ~p~lG~~V~KvGRTT----GlT~G~Itai~V~y~~~-~G~~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVG 402 (594)
....|+.|.-+|.-. .+|.|.|.++....... .+. ...+.+.++. ...+||||++++ |.++++||
T Consensus 124 ~~~~G~~v~~iG~p~g~~~~~~~g~vs~~~~~~~~~~~~~-~~~~~i~~da----~i~~G~SGGPLv-----n~~G~vvG 193 (348)
T 3qo6_A 124 DLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGR-PIQDVIQTDA----AINPGNSGGPLL-----DSSGTLIG 193 (348)
T ss_dssp TCCTTCEEEEEECGGGCTTEEEEEEEEEEEEEECCSSSSS-CEEEEEEECS----CCCTTCTTCEEE-----CTTSCEEE
T ss_pred cCCCCCEEEEEECCCCCCCcEeEEEEEeeccccccccCCC-cccCEEEEeC----CcCCCCcHHHhh-----CCCCeEEE
Confidence 467899999999654 36889999987544322 122 2345677766 567899999999 78899999
Q ss_pred EEEecCCCCCccccccCCCCCcceEeechHHHHhhc
Q 040739 403 IIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLNLL 438 (594)
Q Consensus 403 LlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~L 438 (594)
|.+++.... +...+..|+.|+..+...+
T Consensus 194 I~s~~~~~~--------~~~~g~gfaiP~~~~~~~~ 221 (348)
T 3qo6_A 194 INTAIYSPS--------GASSGVGFSIPVDTVGGIV 221 (348)
T ss_dssp EEEEEECSS--------SSCSSCEEEEEHHHHHHHH
T ss_pred EEEeeecCC--------CCcccEEEEEEecchHHHH
Confidence 998765432 1225678999998877543
No 12
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=98.55 E-value=2.1e-07 Score=92.50 Aligned_cols=157 Identities=22% Similarity=0.215 Sum_probs=88.7
Q ss_pred EEEEEeCCCCceeEEEecCceeccCCCCCCCCCCCCCCcccccccCCCccccccccccCCCccccccccccccccCCCCC
Q 040739 224 GAIVKSQTGSRQVGFLTNRHVAVDLDYPNQKMFHPLPPTLGPGVYLGAVERATSFHHRRPLTFVRADGAFIPFADDFDMS 303 (594)
Q Consensus 224 GclVtD~~G~~~~yiLTNnHVla~~n~~~~~~~~pgdpILQPg~~DGG~~rd~~FIp~~p~N~VDaD~AIi~va~~~d~s 303 (594)
|++|....| |||||+||+.+.... .+. ..||.. ...+.+...+.+ |+|++++....+..
T Consensus 67 GfiI~~~~G----~IlTnaHvv~~a~~i----------~V~--~~dg~~-~~a~vv~~d~~~----DlAlLkv~~~~~~~ 125 (245)
T 3sti_A 67 GVIINASKG----YVLTNNHVINQAQKI----------SIQ--LNDGRE-FDAKLIGSDDQS----DIALLQIQNPSKLT 125 (245)
T ss_dssp EEEEETTTT----EEEECGGGC----CE----------EEE--CTTSCE-EEEEEEEEETTT----TEEEEEESSCCSCC
T ss_pred EEEEeCCCC----EEEEcHHHhCCCCEE----------EEE--ECCCCE-EEEEEEEecCCC----CEEEEEeccCCCCc
Confidence 666754322 899999999874421 111 123321 111222223344 88999986432211
Q ss_pred ccccccccccccCcceeecccCcccccCCCeEEEEeec----ccceEEEEEEEEEE-EeCCCCeEEEEEEEEECCCCCCC
Q 040739 304 TVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGRS----SGLTTGTVLAYALE-YNDEKGICFLTDFLVVGENQQTF 378 (594)
Q Consensus 304 ~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGRT----TGlT~G~Itai~V~-y~~~~G~~~f~dqIVt~~~g~~F 378 (594)
.+. ++ .......|+.|.-+|.- ..+|.|.|+++.-. +... + +.+++.++. .
T Consensus 126 ----~~~----l~--------~s~~~~~G~~v~aiG~P~g~~~~vt~G~vs~~~~~~~~~~-~---~~~~i~tda----~ 181 (245)
T 3sti_A 126 ----QIA----IA--------DSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLE-G---LENFIQTDA----S 181 (245)
T ss_dssp ----CCC----BC--------CGGGCCTTBEEEEEECGGGSCCEEEEEEEEECSSCSSCCT-T---CSSCEEESS----C
T ss_pred ----eee----ec--------CcCCCCCCCEEEEEECCCCCCCcEEeeEEeeecccccCCC-C---ccCEEEEcC----C
Confidence 111 11 12346899999999963 33677888776422 1111 1 133455655 4
Q ss_pred CCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHHhhc
Q 040739 379 DLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLNLL 438 (594)
Q Consensus 379 S~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~L 438 (594)
..+||||++++ |.++++|||..+..... ++..+..|+.|+..+.+.|
T Consensus 182 i~~G~SGGPLv-----n~~G~vVGI~s~~~~~~--------~~~~g~~faIP~~~~~~~~ 228 (245)
T 3sti_A 182 INRGNSGGALL-----NLNGELIGINTAILAPG--------GGSVGIGFAIPSNMARTLA 228 (245)
T ss_dssp CCTTTTTSEEE-----CTTSCEEEEEECCC--------------CCCEEEEEHHHHHHHH
T ss_pred cCCCcchhHee-----cCCCeEEEEEEeEECCC--------CCcceEEEEEeHHHHHHHH
Confidence 67899999999 88899999988765321 1224668999999887654
No 13
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=98.54 E-value=3.1e-07 Score=89.72 Aligned_cols=160 Identities=21% Similarity=0.258 Sum_probs=92.3
Q ss_pred EEEEEeCCCCceeEEEecCceeccCCCCCCCCCCCCCCcccccccCCCccccccccccCCCccccccccccccccCCCCC
Q 040739 224 GAIVKSQTGSRQVGFLTNRHVAVDLDYPNQKMFHPLPPTLGPGVYLGAVERATSFHHRRPLTFVRADGAFIPFADDFDMS 303 (594)
Q Consensus 224 GclVtD~~G~~~~yiLTNnHVla~~n~~~~~~~~pgdpILQPg~~DGG~~rd~~FIp~~p~N~VDaD~AIi~va~~~d~s 303 (594)
|++|... | |+|||+||+.+.... .+. ..+|.. ...+.+...+.+ |+|++++..+.+..
T Consensus 57 G~ii~~~-G----~IlTaaHvv~~~~~~----------~V~--~~~g~~-~~a~vv~~d~~~----DlAll~l~~~~~~~ 114 (237)
T 3lgi_A 57 GVIMDQR-G----YIITNKHVINDADQI----------IVA--LQDGRV-FEALLVGSDSLT----DLAVLKINATGGLP 114 (237)
T ss_dssp EEEEETT-T----EEEEEHHHHTTCSEE----------EEE--CTTSCE-EEEEEEEEETTT----TEEEEECCCSSCCC
T ss_pred EEEEeCC-C----EEEEeeeecCCCCEE----------EEE--eCCCCE-EEEEEEEEcCCC----CEEEEEecCCCCCc
Confidence 6666543 2 899999999764421 111 112321 111111122334 88999986532111
Q ss_pred ccccccccccccCcceeecccCcccccCCCeEEEEeeccc----ceEEEEEEEEEEEeCCCCeEEEEEEEEECCCCCCCC
Q 040739 304 TVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGRSSG----LTTGTVLAYALEYNDEKGICFLTDFLVVGENQQTFD 379 (594)
Q Consensus 304 ~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGRTTG----lT~G~Itai~V~y~~~~G~~~f~dqIVt~~~g~~FS 379 (594)
.+. + .....+..|+.|.-+|.-.| ++.|.|+++........+ ..+.+.++. ..
T Consensus 115 ----~~~----l--------~~~~~~~~G~~v~~~G~p~~~~~~~~~g~vs~~~~~~~~~~~---~~~~i~~d~----~i 171 (237)
T 3lgi_A 115 ----TIP----I--------NARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTG---RQNFLQTDA----SI 171 (237)
T ss_dssp ----CCC----C--------CTTCCCCTTBEEEEEECGGGSCSEEEEEEEEEECCSSCCTTS---CSCCEEECS----CC
T ss_pred ----eEe----c--------cCcccCCCCCEEEEEECCCCCCCcEEEEEEEecccccccCCC---cCCEEEEcC----cc
Confidence 111 1 11234678999999996544 577888777522111111 123455555 46
Q ss_pred CCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHHhhc
Q 040739 380 LEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLNLL 438 (594)
Q Consensus 380 ~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~L 438 (594)
.+||||++++ |.++++|||...+-... ..+....++.|+-|+..+...|
T Consensus 172 ~~G~SGGPlv-----~~~G~vvGI~s~~~~~~-----~~~~~~~g~~~aip~~~i~~~~ 220 (237)
T 3lgi_A 172 NHGNSGGALV-----NSLGELMGINTLSFDKS-----NDGETPEGIGFAIPFQLATKIM 220 (237)
T ss_dssp CTTCTTCEEE-----CTTCCEEEEECCCCCCC-----TTSCCCCSCEEEEEHHHHHHHH
T ss_pred CCCCchHHee-----CCCCeEEEEEeeeeccC-----CCCcCcCceEEEEEHHHHHHHH
Confidence 7899999999 78999999997754321 0111235678999988877654
No 14
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.50 E-value=1.1e-06 Score=89.52 Aligned_cols=100 Identities=16% Similarity=0.173 Sum_probs=64.1
Q ss_pred cccCCCeEEEEeeccc----ceEEEEEEEEEEEe--CCCCe-EEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCce
Q 040739 328 SSLIGKQVVKVGRSSG----LTTGTVLAYALEYN--DEKGI-CFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRP 400 (594)
Q Consensus 328 ~p~lG~~V~KvGRTTG----lT~G~Itai~V~y~--~~~G~-~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~a 400 (594)
.+..|+.|+-+|...| +|.|.|+++.-.+. ...|. ....++|.++. ...+||||++++ +.++++
T Consensus 110 ~~~~G~~v~~~G~p~g~~~~~~~G~vs~~~~~~~~~~~~g~~~~~~~~i~~d~----~~~~G~SGGPlv-----~~~G~v 180 (324)
T 1y8t_A 110 DLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDA----AINPGNSGGALV-----NMNAQL 180 (324)
T ss_dssp TCCTTCEEEEEECGGGCTTEEEEEEEEEEEEEECC-------CCCEEEEEECS----CCCTTCTTEEEE-----CTTSEE
T ss_pred cCCCCCEEEEEEcCCCCCCcEeeeEEeecccccccccccCcccccCCEEEEcC----CCCCCCccCcEE-----CCCCeE
Confidence 4578999999998544 47899988763322 11111 12346777765 578999999999 778999
Q ss_pred EEEEEecCCCCCccccccCCCCCcceEeechHHHHhh
Q 040739 401 IGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLNL 437 (594)
Q Consensus 401 VGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~ 437 (594)
|||++++....+-. -....+..++.|+.|+..++..
T Consensus 181 vGI~s~~~~~~~~~-~~~~~~~~g~~~aIP~~~v~~~ 216 (324)
T 1y8t_A 181 VGVNSAIATLGADS-ADAQSGSIGLGFAIPVDQAKRI 216 (324)
T ss_dssp EEEEEEECCC--------CCCCSSCEEEEEHHHHHHH
T ss_pred EEEEeeecccCccc-ccccccccceEEecCHHHHHHH
Confidence 99998764321000 0000122567899999888754
No 15
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=98.50 E-value=1.2e-06 Score=96.66 Aligned_cols=89 Identities=15% Similarity=0.079 Sum_probs=61.6
Q ss_pred cccCCCeEEEEeecc-----cceEEEEEEEEEEEeCCCCeEEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEE
Q 040739 328 SSLIGKQVVKVGRSS-----GLTTGTVLAYALEYNDEKGICFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIG 402 (594)
Q Consensus 328 ~p~lG~~V~KvGRTT-----GlT~G~Itai~V~y~~~~G~~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVG 402 (594)
.+.+|+.|.-+|.-- -+|.|.|+++.......... ....|.+.. --.+|.||+++| |.++++||
T Consensus 145 ~~~vGd~V~aiG~P~g~~~~tvT~GIVSa~~r~~~~~~~~--~~~~IQtDA----aInpGnSGGPLv-----n~~GeVIG 213 (539)
T 4fln_A 145 LPRLQDSVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS--DLLGIQIDA----AINPGNSGGPAF-----NDQGECIG 213 (539)
T ss_dssp CCCTTCEEEEEECCSSSCCCEEEEEEEEEEEEEECTTSCC--EEEEEEESS----CCCTTTTTSEEE-----CSSSCEEE
T ss_pred cCcCCCeEEEEEcCCCCCCCcEEeEEECcccccccCCCCc--ceeEEEEEe----EecCCCccchhc-----cCCCcEEE
Confidence 357899999999753 36889999998554432222 123566666 468999999999 89999999
Q ss_pred EEEecCCCCCccccccCCCCCcceEeechHHHHh
Q 040739 403 IIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLN 436 (594)
Q Consensus 403 LlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~ 436 (594)
|.++.-... +..+..|+-|+..+..
T Consensus 214 Intai~~~~---------~~~gigfAIP~~~v~~ 238 (539)
T 4fln_A 214 VAFQVYRSE---------ETENIGYVIPTTVVSH 238 (539)
T ss_dssp EECCCC--------------CCCEEEEEHHHHHH
T ss_pred EEEEEecCC---------CCCcceecccHHHHHH
Confidence 988754221 1245688888776543
No 16
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.43 E-value=9.1e-07 Score=94.35 Aligned_cols=155 Identities=23% Similarity=0.201 Sum_probs=93.1
Q ss_pred EEEEEeCCCCceeEEEecCceeccCCCCCCCCCCCCCCcccccccCCCccccccccccCCCccccccccccccccCCCCC
Q 040739 224 GAIVKSQTGSRQVGFLTNRHVAVDLDYPNQKMFHPLPPTLGPGVYLGAVERATSFHHRRPLTFVRADGAFIPFADDFDMS 303 (594)
Q Consensus 224 GclVtD~~G~~~~yiLTNnHVla~~n~~~~~~~~pgdpILQPg~~DGG~~rd~~FIp~~p~N~VDaD~AIi~va~~~d~s 303 (594)
|++|....| |||||+||+.+.... .-.+ .||. ....+.+-..+.+ |+|++++....+.
T Consensus 67 Gfii~~~~G----~IlTn~Hvv~~a~~i--------~V~~----~dg~-~~~a~vv~~d~~~----DlAllkv~~~~~l- 124 (436)
T 4a8c_A 67 GVIINASKG----YVLTNNHVINQAQKI--------SIQL----NDGR-EFDAKLIGSDDQS----DIALLQIQNPSKL- 124 (436)
T ss_pred EEEEECCCC----EEEECHHHhCCCCEE--------EEEe----CCCC-EEEEEEEEEcCCC----CEEEEEecCCCCC-
Confidence 667754322 899999999875421 0111 2333 1112222233444 8899998543211
Q ss_pred ccccccccccccCcceeecccCcccccCCCeEEEEeeccc----ceEEEEEEEEEE-EeCCCCeEEEEEEEEECCCCCCC
Q 040739 304 TVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGRSSG----LTTGTVLAYALE-YNDEKGICFLTDFLVVGENQQTF 378 (594)
Q Consensus 304 ~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGRTTG----lT~G~Itai~V~-y~~~~G~~~f~dqIVt~~~g~~F 378 (594)
+.+. +| .......|+.|.-+|.--| +|.|.|+++.-. +... .+.++|.++. -
T Consensus 125 ---~~~~----l~--------~s~~~~~G~~v~aiG~P~g~~~~vt~G~vs~~~r~~~~~~----~~~~~iq~da----~ 181 (436)
T 4a8c_A 125 ---TQIA----IA--------DSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLE----GLENFIQTDA----S 181 (436)
T ss_pred ---ceEe----cc--------CcccCCCCCEEEEEEcCCCCCccEEEEEEeeecccccCCC----CccCEEEEcC----c
Confidence 1111 11 1235689999999998554 488999888633 2221 1345666666 4
Q ss_pred CCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHHh
Q 040739 379 DLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLN 436 (594)
Q Consensus 379 S~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~ 436 (594)
..+|+||++++ |.++++|||..+..... ++..++.|+-|+..+..
T Consensus 182 i~~GnSGGPl~-----n~~G~vvGI~~~~~~~~--------~~~~g~gfaIP~~~~~~ 226 (436)
T 4a8c_A 182 INRGNAGGALL-----NLNGELIGINTAILAPG--------GGSVGIGFAIPSNMART 226 (436)
T ss_pred cCCCCCcCccc-----CCCCEEEEEEeeeccCC--------CCceeEEEEEehHHHHH
Confidence 67899999999 88999999988765321 12245688888664443
No 17
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.37 E-value=1.8e-06 Score=89.53 Aligned_cols=155 Identities=21% Similarity=0.205 Sum_probs=91.6
Q ss_pred EEEEEeCCCCceeEEEecCceeccCCCCCCCCCCCCCCcccccccCCCccccccccccCCCccccccccccccccCCCCC
Q 040739 224 GAIVKSQTGSRQVGFLTNRHVAVDLDYPNQKMFHPLPPTLGPGVYLGAVERATSFHHRRPLTFVRADGAFIPFADDFDMS 303 (594)
Q Consensus 224 GclVtD~~G~~~~yiLTNnHVla~~n~~~~~~~~pgdpILQPg~~DGG~~rd~~FIp~~p~N~VDaD~AIi~va~~~d~s 303 (594)
|++|....| |||||+||+.+.... .+ ...||.. ...+.+-..+.+ |+|++++....+..
T Consensus 67 GfiI~~~~G----~IlTnaHVv~~~~~i----------~V--~~~dg~~-~~a~vv~~d~~~----DlAlLkv~~~~~~~ 125 (345)
T 3stj_A 67 GVIINASKG----YVLTNNHVINQAQKI----------SI--QLNDGRE-FDAKLIGSDDQS----DIALLQIQNPSKLT 125 (345)
T ss_dssp EEEEETTTT----EEEECHHHHTTEEEE----------EE--ECTTSCE-EEEEEEEEETTT----TEEEEEESSCCSCC
T ss_pred EEEEECCCC----EEEEChHHhCCCCEE----------EE--EeCCCcE-EEEEEEEEcCCC----CEEEEEEcccCCCc
Confidence 666654323 899999999864321 01 1123321 111221122333 88999985432211
Q ss_pred ccccccccccccCcceeecccCcccccCCCeEEEEeecc----cceEEEEEEEEEE-EeCCCCeEEEEEEEEECCCCCCC
Q 040739 304 TVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGRSS----GLTTGTVLAYALE-YNDEKGICFLTDFLVVGENQQTF 378 (594)
Q Consensus 304 ~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGRTT----GlT~G~Itai~V~-y~~~~G~~~f~dqIVt~~~g~~F 378 (594)
.+. ++ .......|+.|+-+|.-- -+|.|.|+++.-. +... + +.+++.++. .
T Consensus 126 ----~~~----l~--------~s~~~~~G~~V~aiG~p~g~~~~vt~G~Vs~~~~~~~~~~-~---~~~~iq~da----~ 181 (345)
T 3stj_A 126 ----QIA----IA--------DSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLE-G---LENFIQTDA----S 181 (345)
T ss_dssp ----CCC----BC--------CGGGCCTTBEEEEEECGGGCSCEEEEEEEEEEEECCSSSS-S---SCCEEEECS----C
T ss_pred ----eEe----ec--------CcccCCCCCEEEEEECCCCCCCcEEeeEEeeecccccCCC-C---ccCEEEEec----c
Confidence 111 11 123468999999999743 3678888888633 2221 1 234566665 4
Q ss_pred CCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHHh
Q 040739 379 DLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLN 436 (594)
Q Consensus 379 S~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~ 436 (594)
..+||||++++ |.++++|||..+..... ++..+..|+.|+..+..
T Consensus 182 i~~GnSGGPLv-----n~~G~vVGI~s~~~~~~--------~~~~g~gfaIP~~~~~~ 226 (345)
T 3stj_A 182 INRGNSGGALL-----NLNGELIGINTAILAPG--------GGSVGIGFAIPSNMART 226 (345)
T ss_dssp CCTTCTTCEEE-----CTTSCEEEEEEEEECTT--------SSCSSCEEEEEHHHHHH
T ss_pred cCCCcCcccee-----CCCCEEEEEEeccccCC--------CCcceeEEEEehHHHHH
Confidence 67899999999 88999999988764321 12245688999776554
No 18
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=98.35 E-value=1.9e-06 Score=88.23 Aligned_cols=154 Identities=19% Similarity=0.190 Sum_probs=84.3
Q ss_pred EEEEEeCCCCceeEEEecCceeccCCCCCCCCCCCCCCcccccccCCCccccccccccCCCccccccccccccccCCCCC
Q 040739 224 GAIVKSQTGSRQVGFLTNRHVAVDLDYPNQKMFHPLPPTLGPGVYLGAVERATSFHHRRPLTFVRADGAFIPFADDFDMS 303 (594)
Q Consensus 224 GclVtD~~G~~~~yiLTNnHVla~~n~~~~~~~~pgdpILQPg~~DGG~~rd~~FIp~~p~N~VDaD~AIi~va~~~d~s 303 (594)
|+++... | |||||+||+.+.... .+. ..+|.. ...+.+...+.+ |+||+++..+....
T Consensus 50 G~iI~~~-G----~ILTaaHvv~~~~~i----------~V~--~~~g~~-~~a~~~~~d~~~----DlAlL~l~~~~~~~ 107 (332)
T 3num_A 50 GFIVSED-G----LIVTNAHVVTNKHRV----------KVE--LKNGAT-YEAKIKDVDEKA----DIALIKIDHQGKLP 107 (332)
T ss_dssp EEEEETT-T----EEEECTTTCCTTSEE----------EEE--ETTSCE-EEEEEEEEETTT----TEEEEEECCSSCCC
T ss_pred EEEEeCC-C----EEEEChHHcCCCCEE----------EEE--ECCCCE-EEEEEEEecCCC----CeEEEEEcCCCCCc
Confidence 5666533 2 899999999763321 111 112321 111111122333 88999987532111
Q ss_pred ccccccccccccCcceeecccCcccccCCCeEEEEeecc----cceEEEEEEEEEEEeCCCCe-EEEEEEEEECCCCCCC
Q 040739 304 TVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGRSS----GLTTGTVLAYALEYNDEKGI-CFLTDFLVVGENQQTF 378 (594)
Q Consensus 304 ~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGRTT----GlT~G~Itai~V~y~~~~G~-~~f~dqIVt~~~g~~F 378 (594)
.+. + .....+..|+.|.-+|.-. .+|.|.|..+....... +. ....+.+.++. .
T Consensus 108 ----~~~----l--------~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~~-~~~~~~~~~i~~d~----~ 166 (332)
T 3num_A 108 ----VLL----L--------GRSSELRPGEFVVAIGSPFSLQNTVTTGIVSTTQRGGKEL-GLRNSDMDYIQTDA----I 166 (332)
T ss_dssp ----CCC----B--------CCTTSCCTTCEEEEECC-----CCEEEEEEEEC---------------CCEEESS----C
T ss_pred ----eee----e--------cCcccCCCCCEEEEEECCCCCCcceeeeEEEeeccccccc-CcCCCcCCEEEEEC----C
Confidence 111 1 1123467899999998543 35778887764211100 00 01123455554 4
Q ss_pred CCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHHhhc
Q 040739 379 DLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLNLL 438 (594)
Q Consensus 379 S~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~L 438 (594)
..+||||++++ |.++++|||...+.. .+..|+.|+..+...|
T Consensus 167 i~~G~SGGPlv-----~~~G~vvGI~s~~~~-------------~g~~~aip~~~i~~~l 208 (332)
T 3num_A 167 INYGNAGGPLV-----NLDGEVIGINTLKVT-------------AGISFAIPSDKIKKFL 208 (332)
T ss_dssp CCTTTTTSEEE-----ETTSCEEEEEEEEEE-------------TTEEEEEEHHHHHHHH
T ss_pred cCCCCcHHHhh-----CCCCcEEEEEeeEec-------------ccceEEECHHHHHHHH
Confidence 56799999999 778999999977653 2458899977665543
No 19
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.31 E-value=1.4e-06 Score=88.76 Aligned_cols=91 Identities=21% Similarity=0.249 Sum_probs=61.4
Q ss_pred cccCCCeEEEEeeccc----ceEEEEEEEEEE-EeCCCCeEEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEE
Q 040739 328 SSLIGKQVVKVGRSSG----LTTGTVLAYALE-YNDEKGICFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIG 402 (594)
Q Consensus 328 ~p~lG~~V~KvGRTTG----lT~G~Itai~V~-y~~~~G~~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVG 402 (594)
.+..|+.|+-+|.--| +|.|.|+++.-. +.. .+ ..++|.++. -..+||||++++ +.++++||
T Consensus 112 ~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~~-~~---~~~~i~~d~----~~~~G~SGGPl~-----~~~G~vvG 178 (318)
T 1te0_A 112 VPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNP-TG---RQNFLQTDA----SINHGNSGGALV-----NSLGELMG 178 (318)
T ss_dssp CCCTTCEEEEECCCSSSSCCEEEEEEEECCCCCCCT-TC---SCCSEEESS----CCCTTTTTSEEE-----CTTCCEEE
T ss_pred CCCCCCEEEEEEcCCCCCCcEEeeEEecccccccCC-CC---cCCEEEECC----CCCCCCCcCceE-----CCCCeEEE
Confidence 4688999999996544 478888876511 111 11 123455554 468899999999 77899999
Q ss_pred EEEecCCCCCccccccCCCCCcceEeechHHHHh
Q 040739 403 IIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLN 436 (594)
Q Consensus 403 LlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~ 436 (594)
|+.++....+ .+....++.|+.|+..+..
T Consensus 179 I~s~~~~~~~-----~~~~~~~~~~aip~~~i~~ 207 (318)
T 1te0_A 179 INTLSFDKSN-----DGETPEGIGFAIPFQLATK 207 (318)
T ss_dssp EEECCSSSSS-----SCCSCCSCEEEEEHHHHHH
T ss_pred EEeeeeccCC-----ccccccceEEeccHHHHHH
Confidence 9988754320 0112356789999988775
No 20
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.21 E-value=2.5e-06 Score=91.55 Aligned_cols=88 Identities=19% Similarity=0.152 Sum_probs=57.9
Q ss_pred cccCCCeEEEEeec---------ccceEEEEEEEEEE-EeCCCCeEEEEEEEEECCCCCCCCCCCCccceEEeeccCCCC
Q 040739 328 SSLIGKQVVKVGRS---------SGLTTGTVLAYALE-YNDEKGICFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEK 397 (594)
Q Consensus 328 ~p~lG~~V~KvGRT---------TGlT~G~Itai~V~-y~~~~G~~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~ 397 (594)
...+|+.|.-+|.- .-+|.|.|+++.-. +.. ..+.++|.++. ...+|+||++++ |.+
T Consensus 147 ~~~~G~~V~aiG~P~G~~~~~~~~~vt~Givs~~~r~~~~~----~~~~~~iqtda----~i~~GnSGGPl~-----n~~ 213 (451)
T 3pv2_A 147 KLEVGDFVVAIGNPFGLNSFGNSQSATFGIVSALKRSDLNI----EGVENFIQTDA----AINPGNSGGALV-----NAK 213 (451)
T ss_dssp GCCTTCEEEEEECCCCC-----CCEEEEEEEEEEC--------------CCEEESS----CCCGGGTTSEEE-----ETT
T ss_pred cCCCCCEEEEEECCCCccccccCCceeEEEEeeccccccCC----CCcceEEEEec----ccCCCCCcCccc-----CCC
Confidence 46789999999954 34678999888633 221 12345667766 467999999999 889
Q ss_pred CceEEEEEecCCCCCccccccCCCCCcceEeechHHHHh
Q 040739 398 PRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLN 436 (594)
Q Consensus 398 ~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~ 436 (594)
+++|||..+..... ++..++.|+-|+..+..
T Consensus 214 G~VIGI~t~~~~~~--------~~~~g~gfaIP~~~~~~ 244 (451)
T 3pv2_A 214 GELIGINTAILSPY--------GGNVGIGFAIPINMVKD 244 (451)
T ss_dssp CCEEEEEECCC--------------CCCEEEEEHHHHHH
T ss_pred CeEEEEEeEeecCC--------CCccceeeeehhHHHHH
Confidence 99999998765321 11245789999776553
No 21
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=98.19 E-value=1.7e-06 Score=88.61 Aligned_cols=89 Identities=18% Similarity=0.189 Sum_probs=59.9
Q ss_pred cccCCCeEEEEeeccc----ceEEEEEEEEEEEeCCCCe-EEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEE
Q 040739 328 SSLIGKQVVKVGRSSG----LTTGTVLAYALEYNDEKGI-CFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIG 402 (594)
Q Consensus 328 ~p~lG~~V~KvGRTTG----lT~G~Itai~V~y~~~~G~-~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVG 402 (594)
....|+.|.-+|.-.| +|.|.|++..-..... |. ....++|.++. -..+||||++++ |.++++||
T Consensus 117 ~~~~G~~v~~~G~p~~~~~~v~~G~vs~~~~~~~~~-g~~~~~~~~i~~d~----~~~~G~SGGPl~-----~~~G~vVG 186 (325)
T 1lcy_A 117 DVRQGEFVVAMGSPFALQNTITSGIVSSAQRPARDL-GLPQTNVEYIQTDA----AIDFGNAGGPLV-----NLDGEVIG 186 (325)
T ss_dssp GCCTTCEEEECCCTTSSSSCCEEEEBCSCSCC----------CCCCEEESS----CCSTTTTTSEEE-----ETTSCEEE
T ss_pred cCCCCCEEEEEECCCCCCCcEEeEEEeccccccccc-CCCCCCCCEEEEcC----CCCCCCccccEE-----CCCCEEEE
Confidence 4578999999987654 5788887764111000 10 11123555655 367899999999 77899999
Q ss_pred EEEecCCCCCccccccCCCCCcceEeechHHHHhhcC
Q 040739 403 IIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLNLLE 439 (594)
Q Consensus 403 LlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~L~ 439 (594)
|+..+.. .+..|+.|+..+.+.|+
T Consensus 187 I~s~~~~-------------~g~~~aip~~~i~~~l~ 210 (325)
T 1lcy_A 187 VNTMKVT-------------AGISFAIPSDRLREFLH 210 (325)
T ss_dssp EEEEEEE-------------TTEEEEEEHHHHHHHTC
T ss_pred EEeEeec-------------CCeeEEEEHHHHHHHHH
Confidence 9987652 24589999998887765
No 22
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.14 E-value=5.2e-06 Score=89.07 Aligned_cols=88 Identities=19% Similarity=0.179 Sum_probs=60.3
Q ss_pred cccCCCeEEEEeeccc----ceEEEEEEEEEE-EeCCCCeEEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEE
Q 040739 328 SSLIGKQVVKVGRSSG----LTTGTVLAYALE-YNDEKGICFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIG 402 (594)
Q Consensus 328 ~p~lG~~V~KvGRTTG----lT~G~Itai~V~-y~~~~G~~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVG 402 (594)
...+|+.|.-+|.--| +|.|+|+++.-. +.. ..+.++|.+.. -..+|+||++++ |.++++||
T Consensus 157 ~~~~G~~V~aiG~P~g~~~tvt~Givs~~~r~~~~~----~~~~~~iqtda----~i~~GnSGGpl~-----n~~G~vvG 223 (448)
T 1ky9_A 157 ALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNA----ENYENFIQTDA----AINRGNAGGALV-----NLNGELIG 223 (448)
T ss_dssp GCCTTCEEEEEECTTSSSCEEEEEEEEEESSCC---------CCCCEEESC----CCTTSCCCSEEE-----CTTSCEEE
T ss_pred cCCCCCEEEEEECCCCCCCeEEeEEEeeccccccCC----CCccCEEEEcC----CCCCCCCCCeeE-----CCCCEEEE
Confidence 4679999999996554 588999887511 111 11245666766 468999999999 88999999
Q ss_pred EEEecCCCCCccccccCCCCCcceEeechHHHHh
Q 040739 403 IIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLN 436 (594)
Q Consensus 403 LlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~ 436 (594)
|..+..... ++..+..|+-|+..+..
T Consensus 224 I~~~~~~~~--------~~~~g~gfaIP~~~~~~ 249 (448)
T 1ky9_A 224 INTAILAPD--------GGNIGIGFAIPSNMVKN 249 (448)
T ss_dssp EEECSSTTS--------CCCSSSEEEEEHHHHHH
T ss_pred EEEEeecCC--------CCccceeeeeecccchh
Confidence 998764321 11245688888766543
No 23
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=98.13 E-value=1.4e-05 Score=76.35 Aligned_cols=61 Identities=25% Similarity=0.470 Sum_probs=41.1
Q ss_pred cccCCCeEEEEeecccc--------eEEEEEEEEEEEeCCCCeEEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCc
Q 040739 328 SSLIGKQVVKVGRSSGL--------TTGTVLAYALEYNDEKGICFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPR 399 (594)
Q Consensus 328 ~p~lG~~V~KvGRTTGl--------T~G~Itai~V~y~~~~G~~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~ 399 (594)
.+..|+.|.-+|.-.|. +.|.|.... . +++.++. ...+||||++++ +.+++
T Consensus 110 ~~~~g~~v~v~G~p~~~~~~~~l~~~~g~v~~~~----~--------~~i~~~~----~~~~GdSGGPlv-----~~~g~ 168 (210)
T 2as9_A 110 DAKVDDKIKVIGYPLPAQNSFKQFESTGTIKRIK----D--------NILNFDA----YIEPGNSGSPVL-----NSNNE 168 (210)
T ss_dssp CCCTTCEEEEEECSSTTTTTSCCEEEEEEEEEEE----T--------TEEEEEC----CCCTTCTTCEEE-----CTTSC
T ss_pred CCCCCCEEEEEeCCCCCCCCcceEEeeeEEcccc----C--------CeEEEcC----ccCCCCccCcEE-----CCCCe
Confidence 45689999988874332 445555431 1 1233333 367899999999 66789
Q ss_pred eEEEEEecCC
Q 040739 400 PIGIIWGGTA 409 (594)
Q Consensus 400 aVGLlfGGs~ 409 (594)
+|||+..|..
T Consensus 169 lvGI~s~g~~ 178 (210)
T 2as9_A 169 VIGVVYGGIG 178 (210)
T ss_dssp EEEEECCSCC
T ss_pred EEEEEecccc
Confidence 9999987764
No 24
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=97.95 E-value=2.1e-05 Score=73.71 Aligned_cols=61 Identities=26% Similarity=0.526 Sum_probs=40.7
Q ss_pred cccCCCeEEEEeecccc--------eEEEEEEEEEEEeCCCCeEEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCc
Q 040739 328 SSLIGKQVVKVGRSSGL--------TTGTVLAYALEYNDEKGICFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPR 399 (594)
Q Consensus 328 ~p~lG~~V~KvGRTTGl--------T~G~Itai~V~y~~~~G~~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~ 399 (594)
.+..|+.|.-+|.-.|. +.|.|..+. .+++.++. -..+||||++++ +.+++
T Consensus 106 ~~~~g~~v~v~G~p~g~~~~~~~~~~~g~v~~~~------------~~~~~~~~----~~~~GdSGGPl~-----~~~g~ 164 (200)
T 2w7s_A 106 GAKVKDRISVIGYPKGAQTKYKMFESTGTINHIS------------GTFMEFDA----YAQPGNSGSPVL-----NSKHE 164 (200)
T ss_dssp CCCTTCEEEEEECTTHHHHTSCEEEEEEEEEEEE------------TTEEEECS----CCCTTCTTCEEE-----CTTSC
T ss_pred cCCCCCEEEEEECCCCCCCccceEEeEEEEEccC------------CCEEEEcc----eeCCCCccCeEE-----CcCCE
Confidence 45789999999964333 445554421 12334444 367899999999 66789
Q ss_pred eEEEEEecCC
Q 040739 400 PIGIIWGGTA 409 (594)
Q Consensus 400 aVGLlfGGs~ 409 (594)
+|||+..|..
T Consensus 165 lvGI~s~g~~ 174 (200)
T 2w7s_A 165 LIGILYAGSG 174 (200)
T ss_dssp EEEEEEEEC-
T ss_pred EEEEEecccc
Confidence 9999977653
No 25
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=97.95 E-value=4.2e-05 Score=76.42 Aligned_cols=133 Identities=20% Similarity=0.244 Sum_probs=69.0
Q ss_pred EEEecCceeccCCCCCCCCCCCCCCcccccccCCC-----ccccccccccCCCccccccccccccccCCCCCcccccccc
Q 040739 237 GFLTNRHVAVDLDYPNQKMFHPLPPTLGPGVYLGA-----VERATSFHHRRPLTFVRADGAFIPFADDFDMSTVTTSVKG 311 (594)
Q Consensus 237 yiLTNnHVla~~n~~~~~~~~pgdpILQPg~~DGG-----~~rd~~FIp~~p~N~VDaD~AIi~va~~~d~s~vs~~I~~ 311 (594)
++||++||+...... +..-.+.+|..++. .....+++.....+ |+||+++.++.....+...|..
T Consensus 45 ~VLTAAHCv~~~~~~------~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~~~~----DIALLkL~~~~~~~~~~~~v~p 114 (274)
T 2o8l_A 45 TLLTNKHVVDATHGD------PHALKAFPSAINQDNYPNGGFTAEQITKYSGEG----DLAIVKFSPNEQNKHIGEVVKP 114 (274)
T ss_dssp EEEECHHHHHTTTTC------GGGEEEEETCCBTTBCTTCCEEEEEEEECSSSS----CCEEEEECCCTTSCCTTTSSCC
T ss_pred EEEEChhhCcccCCC------cceEEEEecccCcccccCccEEEEEEEeCCCCC----cEEEEEecCccccccccccccc
Confidence 999999998764321 00112333322221 11112222222233 8899999865311111111111
Q ss_pred ccccCcceeecccCcccccCCCeEEEEeecccc-------eEEEEEEEEEEEeCCCCeEEEEEEEEECCCCCCCCCCCCc
Q 040739 312 LGEIGDVKIVDLQSPISSLIGKQVVKVGRSSGL-------TTGTVLAYALEYNDEKGICFLTDFLVVGENQQTFDLEGDS 384 (594)
Q Consensus 312 lG~IG~vk~vdl~g~~~p~lG~~V~KvGRTTGl-------T~G~Itai~V~y~~~~G~~~f~dqIVt~~~g~~FS~~GDS 384 (594)
+.|........|+.|.-+|.-.+. +.|.|..+. ..++.... -+..|||
T Consensus 115 ---------i~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~------------~~~i~~~~----~~c~GdS 169 (274)
T 2o8l_A 115 ---------ATMSNNAETQTNQNITVTGYPGDKPVATMWESKGKITYLK------------GEAMQYDL----STTGGNS 169 (274)
T ss_dssp ---------CEECCCTTCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEE------------TTEEEESC----CCCTTCT
T ss_pred ---------ccccccccccCCCEEEEEECCCCCCCceEEecCceEEecC------------CCeEEeCc----ccCCCCc
Confidence 112122235678999888874332 333333211 11233333 4678999
Q ss_pred cceEEeeccCCCCCceEEEEEecCC
Q 040739 385 GSLILMKGENGEKPRPIGIIWGGTA 409 (594)
Q Consensus 385 GSlVl~~~~~d~~~~aVGLlfGGs~ 409 (594)
|+.|+ +.++++|||+..|..
T Consensus 170 GGPLv-----~~~g~lvGIvS~G~~ 189 (274)
T 2o8l_A 170 GSPVF-----NEKNEVIGIHWGGVP 189 (274)
T ss_dssp TCEEE-----CTTSCEEEEEEEEET
T ss_pred hhhee-----ccCCeEEEEEeCccc
Confidence 99999 667899999987753
No 26
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=97.77 E-value=7.2e-05 Score=74.46 Aligned_cols=91 Identities=21% Similarity=0.353 Sum_probs=51.0
Q ss_pred ccccccccccCCCCCccccccccccccCcceeecccCcccccCCCeEEEEeecccc-------eEEEEEEEEEEEeCCCC
Q 040739 289 ADGAFIPFADDFDMSTVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGRSSGL-------TTGTVLAYALEYNDEKG 361 (594)
Q Consensus 289 aD~AIi~va~~~d~s~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGRTTGl-------T~G~Itai~V~y~~~~G 361 (594)
.|+||+++.++.....++..|.. + .|........|+.|.-+|.-.+. +.|.|..+.
T Consensus 92 ~DIALLkL~~~~~~~~~~~~v~p---i------~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~-------- 154 (268)
T 1wcz_A 92 GDLAIVKFSPNEQNKHIGEVVKP---A------TMSNNAETQVNQNITVTGYPGDKPVATMWESKGKITYLK-------- 154 (268)
T ss_dssp SCCEEEEECCCTTSCCHHHHSCC---C------CBCCCSSCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEE--------
T ss_pred CcEEEEEecCcccccccccccce---e------ecccccccCCCCEEEEEECCCCCCCceEEeecceEEeeC--------
Confidence 38899998764311111111211 1 12111235678888888874332 223333211
Q ss_pred eEEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739 362 ICFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTA 409 (594)
Q Consensus 362 ~~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~ 409 (594)
.+++.... -+..||||+.|+ +.++++|||+..|..
T Consensus 155 ----~~~i~~~~----~~c~GdSGGPLv-----~~~g~lvGIvS~G~~ 189 (268)
T 1wcz_A 155 ----GEAMQYDL----STTGGNSGSPVF-----NEKNEVIGIHWGGVP 189 (268)
T ss_dssp ----TTEEEESB----CCCTTCTTCEEE-----CTTSCEEEEEEEEET
T ss_pred ----CCeEEEec----ccCCCCccCeEE-----ccCCEEEEEEeCCcc
Confidence 11333333 467899999999 667899999987753
No 27
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=97.75 E-value=3.4e-05 Score=74.75 Aligned_cols=117 Identities=16% Similarity=0.158 Sum_probs=60.1
Q ss_pred cccccccccccCCCCCccccccccccccCcceeecccCcccccCCCeEEEEeecccceEEEEEEEEEEEeCCCCeEEEEE
Q 040739 288 RADGAFIPFADDFDMSTVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGRSSGLTTGTVLAYALEYNDEKGICFLTD 367 (594)
Q Consensus 288 DaD~AIi~va~~~d~s~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGRTTGlT~G~Itai~V~y~~~~G~~~f~d 367 (594)
+.|+||+++..+......+..|.. + .|........|+.|.-+|.-.+.....+....+.+.....
T Consensus 118 ~~DiAll~l~~~~~~~~~~~~v~~---i------~L~~~~~~~~g~~~~v~Gwg~~~~~~~l~~~~~~~~~~~~------ 182 (242)
T 1agj_A 118 GVDLALIRLKPDQNGVSLGDKISP---A------KIGTSNDLKDGDKLELIGYPFDHKVNQMHRSEIELTTLSR------ 182 (242)
T ss_dssp TSCCEEEEECCCTTSCCHHHHSCC---C------EECCSTTCCTTCEEEEEECCTTTSTTCCEEEEEEECCGGG------
T ss_pred CCcEEEEEEcCCCccccccccccc---e------ecCccccCCCCCEEEEEeCCCCCCCccceeeeeeEecCCc------
Confidence 348899999865321111111211 1 1111223567888888887543321112222232221111
Q ss_pred EEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechH-HHHh
Q 040739 368 FLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLG-RLLN 436 (594)
Q Consensus 368 qIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~-~VL~ 436 (594)
.+.+.. ....||||++++ +.++++|||+..|... ........++.+|. .++.
T Consensus 183 ~~~~~~----~~c~GdSGGPl~-----~~~g~lvGI~s~g~~c--------~~~~~~~~~~~~i~~~~~~ 235 (242)
T 1agj_A 183 GLRYYG----FTVPGNSGSGIF-----NSNGELVGIHSSKVSH--------LDREHQINYGVGIGNYVKR 235 (242)
T ss_dssp SEEEEC----CCCGGGTTCEEE-----CTTSEEEEEEEEEEEC--------SSTTCEEEEEEECCHHHHH
T ss_pred eEEEeC----CcCCCCCchHhc-----ccCCEEEEEEeccccc--------cCcCCCceeeEEehHHHHH
Confidence 111222 467899999999 6688999999766431 11123456677774 4443
No 28
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=97.70 E-value=6.8e-05 Score=69.92 Aligned_cols=61 Identities=21% Similarity=0.375 Sum_probs=39.7
Q ss_pred cccCCCeEEEEeecccce--------EEEEEEEEEEEeCCCCeEEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCc
Q 040739 328 SSLIGKQVVKVGRSSGLT--------TGTVLAYALEYNDEKGICFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPR 399 (594)
Q Consensus 328 ~p~lG~~V~KvGRTTGlT--------~G~Itai~V~y~~~~G~~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~ 399 (594)
.+..|+.|.-+|.-.+.. .|.|..+. ..++.... ...+||||++++ +.+++
T Consensus 109 ~~~~g~~~~~~G~g~~~~~~~~~~~~~g~v~~~~------------~~~~~~~~----~~~~GdSGGPl~-----~~~g~ 167 (204)
T 2vid_A 109 GAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVE------------GSSIVYSA----HTESGNSGSPVL-----NSNNE 167 (204)
T ss_dssp CCCTTCEEEEEECCCCCC--CCCEEEEEEEEEEE------------TTEEEECC----CCCGGGTTCEEE-----CTTSC
T ss_pred cCCCCCEEEEEeCCCCCCCCcceEeeccEEeecc------------CCeEEEec----ccCCCCccCcEE-----CCCCe
Confidence 456788888888654332 23332211 11333343 477899999999 66889
Q ss_pred eEEEEEecCC
Q 040739 400 PIGIIWGGTA 409 (594)
Q Consensus 400 aVGLlfGGs~ 409 (594)
+|||+++|..
T Consensus 168 lvGI~s~g~~ 177 (204)
T 2vid_A 168 LVGIHFASDV 177 (204)
T ss_dssp EEEEEEEECC
T ss_pred EEEEEecCcc
Confidence 9999988763
No 29
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=97.67 E-value=0.00023 Score=66.81 Aligned_cols=27 Identities=19% Similarity=0.169 Sum_probs=23.7
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTA 409 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~ 409 (594)
-..+|.||+++| |.++++|||+++...
T Consensus 121 ~i~pGnSGGPl~-----n~~G~VVGI~~~~~g 147 (163)
T 2w5e_A 121 RTQDGMSGAPVC-----DKYCRVLAVHQTNTG 147 (163)
T ss_dssp SCSSCCTTCEEE-----CTTSCEEEEEEEEET
T ss_pred EeCCCCchhhEE-----cCCCEEEEEEccCcc
Confidence 477899999999 889999999987654
No 30
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=97.49 E-value=0.00011 Score=71.80 Aligned_cols=26 Identities=38% Similarity=0.419 Sum_probs=22.2
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
...+||||++++ +.++++|||+..|.
T Consensus 180 ~~~~GdSGGPlv-----~~~g~lvGI~s~g~ 205 (246)
T 1qtf_A 180 YTEVGNSGSGIF-----NLKGELIGIHSGKG 205 (246)
T ss_dssp CCCGGGTTCEEE-----CTTCCEEEEEEEEE
T ss_pred CCCCCCchhheE-----CCCCEEEEEEeccc
Confidence 367899999999 67889999997764
No 31
>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase; 2.40A {Sesbania mosaic virus}
Probab=97.40 E-value=0.00079 Score=65.20 Aligned_cols=157 Identities=20% Similarity=0.117 Sum_probs=81.0
Q ss_pred ceeeeEEEEEeCCCCceeEEEecCceeccCCCCCCCCCCCCCCcccccccCCCccccccccccCCCcccccccccccccc
Q 040739 219 TYGTLGAIVKSQTGSRQVGFLTNRHVAVDLDYPNQKMFHPLPPTLGPGVYLGAVERATSFHHRRPLTFVRADGAFIPFAD 298 (594)
Q Consensus 219 taGTLGclVtD~~G~~~~yiLTNnHVla~~n~~~~~~~~pgdpILQPg~~DGG~~rd~~FIp~~p~N~VDaD~AIi~va~ 298 (594)
..|+ |+.|+ -+ ++.|+||+.||+...+. .+.+. ++|..-....|-+..+...=+.|+||+++.+
T Consensus 27 h~G~-g~~V~-~~--G~~~LlTA~Hv~~~~~~-----------~~~~~-k~g~~ip~~~~~~~~~~~d~~~D~all~vp~ 90 (191)
T 1zyo_A 27 TIGF-GCRTK-ID--GEDCLLTAHHVWCNSMR-----------PTGLA-KAGKQVSVEDWEISMSSSDKMLDFAIVRVPT 90 (191)
T ss_dssp EEEE-EEEEE-C----CEEEEECHHHHTSSSC-----------CCEEE-ETTEEEECCSCEEEEEECCTTTCEEEEECCH
T ss_pred EEEE-EEEEE-EC--CCcEEEEChhhCcCCcc-----------eeeec-CCCCEEEcccceeeEccCCCCCcEEEEEcCC
Confidence 4454 45555 32 46899999999865321 12222 3444111223322111111124779988653
Q ss_pred CCCCCccccccccccccCcceeecccCcccccCCCeEEEEee--cccceEEEEEEEEEEEeCCCCeEEEEEEEEECCCCC
Q 040739 299 DFDMSTVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGR--SSGLTTGTVLAYALEYNDEKGICFLTDFLVVGENQQ 376 (594)
Q Consensus 299 ~~d~s~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGR--TTGlT~G~Itai~V~y~~~~G~~~f~dqIVt~~~g~ 376 (594)
. |-+. +| ++.+.++ .+..++.|.-.|- ++++... ..+......+ .++....
T Consensus 91 ~-----~~s~------lg-~~~a~~~---~~~~~~~vt~yg~~~~~~~~s~----~g~~~~~~~~-----~~~~~~~--- 143 (191)
T 1zyo_A 91 H-----VWSK------LG-VKSTPLV---CPSSKDVITCYGGSSSDCLMSG----VGSSSTSEFT-----WKLTHTC--- 143 (191)
T ss_dssp H-----HHHH------HT-CCCCCBC---CCCSCEEEEEEEESSTTSEEEE----EEEEEECSST-----TEEEECC---
T ss_pred C-----hhhh------cC-cceeEee---cCCCCccEEEEeecCCCCEeec----ccceeeccCC-----cEEEEEc---
Confidence 1 2111 11 1222222 2235888888885 4554432 2211111111 2444555
Q ss_pred CCCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHHhh
Q 040739 377 TFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLNL 437 (594)
Q Consensus 377 ~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~ 437 (594)
-+.+|+|||+|| +. +.+|||+.|+... +++-.+..+.-+++.
T Consensus 144 -~T~~G~SGsP~~-----ng-~~IVGvh~G~~~~------------~~~N~a~n~~~~~~~ 185 (191)
T 1zyo_A 144 -PTAAGWSGTPLY-----SS-RGVVGMHVGFEEI------------GKLNRGVNMFYVANY 185 (191)
T ss_dssp -CCCTTCTTCEEE-----CS-SCEEEEEEEEEET------------TTEEEEECHHHHHHH
T ss_pred -CCCCCCCCCcEE-----cC-CeEEEEEeCcccC------------CceeeeeehHHHhhh
Confidence 368999999999 44 5899999998642 234457777777664
No 32
>1mbm_A NSP4 proteinase, chymotrypsin-like serine protease; serine proteinase, chymotrypsin-like proteinase, collapsed O HOLE, transferase; 2.00A {Equine arteritis virus} SCOP: b.47.1.3
Probab=97.06 E-value=0.00091 Score=65.10 Aligned_cols=29 Identities=28% Similarity=0.514 Sum_probs=23.5
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCCCCCc
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGR 413 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~ 413 (594)
|..||||||+|+ +.. ++||++.| ++..|.
T Consensus 108 ~t~PGDSGsPVl-----~~~-~vIGV~T~-s~s~gs 136 (198)
T 1mbm_A 108 WTTSGDSGSAVV-----QGD-AVVGVHTG-SNTSGV 136 (198)
T ss_dssp CCCGGGTTCEEE-----ETT-EEEEEEEE-EEGGGE
T ss_pred cCCCCCCCCccc-----cCC-eEEEEEec-cCCCCc
Confidence 679999999999 666 99999999 443333
No 33
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*
Probab=96.45 E-value=0.015 Score=55.02 Aligned_cols=44 Identities=20% Similarity=0.179 Sum_probs=28.3
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL 435 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL 435 (594)
-+-.||||+.++. ++.++|++..|...|+. +....+|..+...+
T Consensus 174 ~~C~GDSGgPl~~------~~~l~Gi~S~g~~~C~~--------~~~p~vyt~V~~y~ 217 (234)
T 3s9c_A 174 DTCHGDSGGPLIC------NGEMHGIVAGGSEPCGQ--------HLKPAVYTKVFDYN 217 (234)
T ss_dssp BCCTTCTTCEEEE------TTEEEEEEEECCSSTTC--------TTCCEEEEEGGGGH
T ss_pred ccCCCCCCCeEEE------eCCcEEEEEEeCCCCCC--------CCCCcEEEEhHHhH
Confidence 4557999999993 45699999877654421 12335666655443
No 34
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Probab=96.30 E-value=0.029 Score=53.53 Aligned_cols=38 Identities=18% Similarity=0.122 Sum_probs=24.5
Q ss_pred EEEEC-CCCCCCCCCCCccceEEeeccCCCCCceEEEEEecCCCC
Q 040739 368 FLVVG-ENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANR 411 (594)
Q Consensus 368 qIVt~-~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~ 411 (594)
++-+. ..++.-+-.||||++++. ++.++|++.-|...|
T Consensus 172 ~~Ca~~~~~~~~~C~GDSGgPL~~------~~~l~Gi~S~g~~~C 210 (237)
T 1ao5_A 172 MLCAGEMGGGKDTCRDDSGGPLIC------DGILQGTTSYGPVPC 210 (237)
T ss_dssp EEEEECTTCSCBCCTTCTTCEEEE------TTEEEEEEEECCSST
T ss_pred EEEEccCCCCCCCCCCCCcceEEE------CCEEeEEEeEcCCCC
Confidence 44444 222334567999999993 458999997663334
No 35
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}
Probab=96.18 E-value=0.027 Score=53.41 Aligned_cols=29 Identities=24% Similarity=0.219 Sum_probs=21.4
Q ss_pred CCCCCCCccceEEeeccCCCCCceEEEEEecCCCC
Q 040739 377 TFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANR 411 (594)
Q Consensus 377 ~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~ 411 (594)
.-+-.||||+.++. +++++|++.-|...|
T Consensus 177 ~~~C~GDSGgPL~~------~~~l~Gi~S~g~~~C 205 (238)
T 4e7n_A 177 KDTCKGDSGGPLIC------NGQFQGIASWGDDPC 205 (238)
T ss_dssp CBCCTTCTTCEEEE------TTEEEEEEEECCSST
T ss_pred CccCCCCCCcceEE------CCEEEEEEEEeCCCC
Confidence 34567999999993 457999997665434
No 36
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*
Probab=96.16 E-value=0.033 Score=52.64 Aligned_cols=29 Identities=24% Similarity=0.228 Sum_probs=21.1
Q ss_pred CCCCCCCccceEEeeccCCCCCceEEEEEecCCCC
Q 040739 377 TFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANR 411 (594)
Q Consensus 377 ~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~ 411 (594)
.-+-.||||++++. ++.++|++.-|...|
T Consensus 173 ~~~C~GDSGgPL~~------~~~l~Gi~S~g~~~C 201 (234)
T 3s69_A 173 KDTCGGDSGGPLIC------NGQFQGIVSFGAHPC 201 (234)
T ss_dssp CBCCTTCTTCEEEE------TTEEEEEEEECCSST
T ss_pred CccCCCCCccceEE------cCEEEEEEEEccccc
Confidence 34567999999993 456999996665434
No 37
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2
Probab=96.12 E-value=0.031 Score=53.11 Aligned_cols=44 Identities=25% Similarity=0.251 Sum_probs=28.8
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL 435 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL 435 (594)
-+-.||||++++. ++.++|++.-|...|+. +....+|..+...+
T Consensus 174 ~~C~GDSGgPL~~------~~~l~GI~S~g~~~C~~--------~~~p~vyt~V~~y~ 217 (225)
T 1npm_A 174 DTCQGDSGGPLVC------DGMLQGITSWGSDPCGK--------PEKPGVYTKICRYT 217 (225)
T ss_dssp BCCTTCTTCEEEE------TTEEEEEEEECCSSSCB--------TTBCEEEEEHHHHH
T ss_pred eecCCCCCchheE------CCEEEEEEEeCCCCCCC--------CCCCeEEEEHHHHH
Confidence 4567999999993 35899999766433421 12346777776654
No 38
>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*
Probab=96.08 E-value=0.046 Score=52.19 Aligned_cols=105 Identities=18% Similarity=0.186 Sum_probs=52.4
Q ss_pred cccccccccccCCCCCccccccccccccCcceeecccCcccccCCCeEEEEee--ccc---ceEEEEEEEEEEEeCC---
Q 040739 288 RADGAFIPFADDFDMSTVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGR--SSG---LTTGTVLAYALEYNDE--- 359 (594)
Q Consensus 288 DaD~AIi~va~~~d~s~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGR--TTG---lT~G~Itai~V~y~~~--- 359 (594)
+.|+||+++.++...+ ..|.. + .| ....+..|+.+.-.|- +.. .+..+...+.+.+-+.
T Consensus 94 ~~DIALl~L~~~~~~~---~~v~p---i------~L-p~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C 160 (237)
T 2zch_P 94 SHDLMLLRLSEPAELT---DAVKV---M------DL-PTQEPALGTTCYASGWGSIEPEEFLTPKKLQCVDLHVISNDVC 160 (237)
T ss_dssp TTCCEEEEESSCCCCC---SSCCC---C------CC-CSSCCCTTCEEEEEESCCSSSSSCCCCSBCEEEEEEEECHHHH
T ss_pred CcceEEEEeCCCCccC---CcEee---e------EC-CCCCCCCCCEEEEEeCCccCCCCCcCCcccEEeEEEEeCHHHh
Confidence 4489999998765433 22211 1 11 1123456777776664 211 0122333333333211
Q ss_pred ---CCeEEEEEEEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecCCCC
Q 040739 360 ---KGICFLTDFLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANR 411 (594)
Q Consensus 360 ---~G~~~f~dqIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~ 411 (594)
-...+-..++-+.. .+..-+-.||||++++ .++.++|++.-|...|
T Consensus 161 ~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~------~~~~l~Gi~S~g~~~C 210 (237)
T 2zch_P 161 AQVHPQKVTKFMLCAGRWTGGKSTCSGDSGGPLV------CNGVLQGITSWGSEPC 210 (237)
T ss_dssp HHHCSSBCCTTEEEEECTTCSCBCCTTCTTCEEE------SSSSEEEEEEECCSST
T ss_pred cccccCCCCceEEeecCCCCCCcccCCCccCeEE------ECCEEEEEEEeCcCCC
Confidence 00011122444432 2233456799999999 2468999996554333
No 39
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2
Probab=96.06 E-value=0.026 Score=53.85 Aligned_cols=105 Identities=19% Similarity=0.177 Sum_probs=54.5
Q ss_pred cccccccccccCCCCCccccccccccccCcceeecccCcccccCCCeEEEEe--ecc---cceEEEEEEEEEEEeCCC--
Q 040739 288 RADGAFIPFADDFDMSTVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVG--RSS---GLTTGTVLAYALEYNDEK-- 360 (594)
Q Consensus 288 DaD~AIi~va~~~d~s~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvG--RTT---GlT~G~Itai~V~y~~~~-- 360 (594)
+-|+||+++.++...+ ..|. ++ -| ....+..|+.+.-.| +++ +........+.+.+-...
T Consensus 94 ~~DIALl~L~~~~~~~---~~v~---pi------cL-p~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C 160 (237)
T 1gvz_A 94 SHDLMLLRLAQPARIT---DAVK---IL------DL-PTQEPKLGSTCYTSGWGLISTFTNRGSGTLQCVELRLQSNEKC 160 (237)
T ss_dssp TTCCEEEEESSCCCCB---TTBC---CC------CC-CSSCCCTTCEEEEEEEECSCTTTCSEEEEEEEEEEEEECGGGG
T ss_pred CCceEEEEeCCCcccC---CcEe---ee------EC-CCCCCCCCCEEEEECCCcccCCCCCCCCccEEEEEeEeChhHh
Confidence 4599999998765433 2221 11 11 112345677665555 332 334555555555543210
Q ss_pred ----CeEEEEEEEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecCCCC
Q 040739 361 ----GICFLTDFLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANR 411 (594)
Q Consensus 361 ----G~~~f~dqIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~ 411 (594)
+..+...++-+.. .+..-.-.||||++++. ++.++|++.-|...|
T Consensus 161 ~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~------~~~l~GI~S~g~~~C 210 (237)
T 1gvz_A 161 ARAYPEKMTEFVLCATHRDDSGSICLGDSGGALIC------DGVFQGITSWGYSEC 210 (237)
T ss_dssp CSSCGGGCCTTEEEEECSSTTCEECGGGTTCEEEE------TTEEEEEECCCSSSC
T ss_pred hhhhhhcCCCceEEEeeCCCCCccCCCCccCcEee------CCEEEEEEEeCCCCC
Confidence 0001122444432 22233567999999993 458999996654334
No 40
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*
Probab=95.99 E-value=0.03 Score=53.33 Aligned_cols=35 Identities=20% Similarity=0.357 Sum_probs=23.3
Q ss_pred EEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 368 FLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 368 qIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
++-+...++.-+-.||||++++. ++.++|++.-|.
T Consensus 163 ~~Ca~~~~~~~~C~GDSGgPL~~------~~~l~Gi~S~g~ 197 (227)
T 2psx_A 163 MFCAGDKAGRDSCQGDSGGPVVC------NGSLQGLVSWGD 197 (227)
T ss_dssp EEEECCSTTCBCCTTCTTCEEEE------TTEEEEEEEECC
T ss_pred EEcccCCCCCccCCCCCCcceee------CCEEEEEEeecC
Confidence 44444322334567999999993 358999997663
No 41
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A
Probab=95.93 E-value=0.029 Score=52.90 Aligned_cols=51 Identities=24% Similarity=0.316 Sum_probs=31.5
Q ss_pred EEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739 368 FLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL 435 (594)
Q Consensus 368 qIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL 435 (594)
++-+.. .+..-.-.||||++++. ++.++|++.-|.... .. ..+|..+...+
T Consensus 165 ~~Ca~~~~~~~~~C~GDsGgPl~~------~~~l~Gi~S~g~~c~--------~~---p~vyt~v~~~~ 216 (226)
T 4ag1_A 165 QLCVGNPRKTKSAFKGDSGGPLLC------AGVAQGIVSYGRSDA--------KP---PAVFTRISHYR 216 (226)
T ss_dssp EEEESCTTSCCBCCTTCTTCEEEE------TTEEEEEEEECBTTC--------CS---CEEEEEHHHHH
T ss_pred eEeeccCCCCCcCccCCCCCceEE------cCEEEEEEEECCCCC--------CC---CCEEEEhHHHH
Confidence 444433 22334567999999993 568999997665321 11 36777766544
No 42
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*
Probab=95.87 E-value=0.041 Score=52.53 Aligned_cols=36 Identities=25% Similarity=0.281 Sum_probs=23.5
Q ss_pred EEEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 367 DFLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 367 dqIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
+++-+.. .++.-+-.||||++++. ++.++|++.-|.
T Consensus 159 ~~~Ca~~~~~~~~~C~GDSGgPL~~------~~~l~Gi~S~g~ 195 (231)
T 2aiq_A 159 TTLCAGILEGGKDTCKGDSGGPLIC------NGQFQGILSVGG 195 (231)
T ss_dssp SEEEEECTTCSCBCCTTCTTCEEEE------TTEEEEEEEEEC
T ss_pred CcEEeccCCCCCcccCCcCCCcEEE------CCEEEEEEEEeC
Confidence 3444432 22334567999999993 358999996553
No 43
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Probab=95.77 E-value=0.04 Score=52.43 Aligned_cols=38 Identities=24% Similarity=0.312 Sum_probs=24.4
Q ss_pred EEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecCCCC
Q 040739 368 FLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANR 411 (594)
Q Consensus 368 qIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~ 411 (594)
++-+.. .+..-+-.||||++++. ++.++|++.-|...|
T Consensus 160 ~~Ca~~~~~~~~~C~GDsGgPL~~------~~~l~Gi~S~g~~~C 198 (223)
T 2bdg_A 160 MFCAGGGQDQKDSCNGDSGGPLIC------NGYLQGLVSFGKAPC 198 (223)
T ss_dssp EEEECCSTTCCBCCTTCTTCEEEE------TTEEEEEEEECCSST
T ss_pred eEeccCCCCCCCcCCCCCCchheE------ccEEEEEEEecCCCC
Confidence 444443 22234567999999993 358999997664334
No 44
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2
Probab=95.72 E-value=0.03 Score=53.40 Aligned_cols=105 Identities=19% Similarity=0.244 Sum_probs=52.5
Q ss_pred cccccccccccCCCCCccccccccccccCcceeecccCcccccCCCeEEEEee--cc---cceEEEEEEEEEEEeCCC--
Q 040739 288 RADGAFIPFADDFDMSTVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGR--SS---GLTTGTVLAYALEYNDEK-- 360 (594)
Q Consensus 288 DaD~AIi~va~~~d~s~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGR--TT---GlT~G~Itai~V~y~~~~-- 360 (594)
+.|+||+++.++...+ ..|.. + .| ....+..|+.+.-.|- +. +..........+.+-+..
T Consensus 92 ~~DIALl~L~~~~~~~---~~v~p---i------cL-~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C 158 (235)
T 1ton_A 92 SNDLMLLHLSEPADIT---GGVKV---I------DL-PTKEPKVGSTCLASGWGSTNPSEMVVSHDLQCVNIHLLSNEKC 158 (235)
T ss_dssp TTCCEEEEESSCCCCC---SSCCC---C------CC-CCSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECGGGC
T ss_pred cCCEEEEEcCCccccC---Cccee---e------eC-CCCCCCCCCEEEEEecCCCCCCCCccCccceEEEEEEeCHHHH
Confidence 3489999998765433 12211 1 11 1123456777766664 21 111222333333332110
Q ss_pred ----CeEEEEEEEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecCCCC
Q 040739 361 ----GICFLTDFLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANR 411 (594)
Q Consensus 361 ----G~~~f~dqIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~ 411 (594)
+..+...++-+.. .++.-+-.||||++++. ++.++|++..|...|
T Consensus 159 ~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~------~~~l~Gi~S~g~~~C 208 (235)
T 1ton_A 159 IETYKDNVTDVMLCAGEMEGGKDTCAGDSGGPLIC------DGVLQGITSGGATPC 208 (235)
T ss_dssp GGGGSTTGGGGEEEEECTTCSCBCCTTCTTCEEEE------TTEEEEEECCCCSSC
T ss_pred HHHhcCcCCCCeEeeccCCCCCcCCCCCCccccEE------CCEEEEEEeeCCCCC
Confidence 0001123444432 22334567999999993 458999997764334
No 45
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2
Probab=95.69 E-value=0.12 Score=48.71 Aligned_cols=23 Identities=26% Similarity=-0.015 Sum_probs=18.4
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEe
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWG 406 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfG 406 (594)
-.-.||||++++. ++.++|++.-
T Consensus 170 ~~C~GDSGgPL~~------~~~l~Gi~s~ 192 (221)
T 1fuj_A 170 GICFGDSGGPLIC------DGIIQGIDSF 192 (221)
T ss_dssp BCCTTCTTCEEEE------TTEEEEEEEE
T ss_pred CCCCCCCCCeeEE------CCEEeEEEEE
Confidence 4567999999993 4589999865
No 46
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Probab=95.67 E-value=0.09 Score=49.72 Aligned_cols=28 Identities=14% Similarity=0.050 Sum_probs=20.6
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCCCC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANR 411 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~ 411 (594)
-.-.||||+.++. ++.++|++.-|...|
T Consensus 169 ~~C~GDSGgPl~~------~g~l~Gi~S~g~~~C 196 (225)
T 1a7s_A 169 GICNGDGGTPLVC------EGLAHGVASFSLGPC 196 (225)
T ss_dssp BCCTTCTTCEEEE------TTEEEEEEEEECSST
T ss_pred CcccCCCcchhee------CCEEEEEEEEccCCc
Confidence 4567999999993 259999997663333
No 47
>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=95.62 E-value=0.018 Score=54.26 Aligned_cols=36 Identities=22% Similarity=0.344 Sum_probs=23.7
Q ss_pred EEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739 368 FLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTA 409 (594)
Q Consensus 368 qIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~ 409 (594)
++-+.. .+..-.-.||||++++. ++.++|++.-|..
T Consensus 160 ~~Ca~~~~~~~~~C~GDsGgPl~~------~~~l~Gi~S~g~~ 196 (223)
T 4i8h_A 160 MFCAGYLEGGKDSCQGDSGGPVVC------SGKLQGIVSWGSG 196 (223)
T ss_dssp EEEESCTTSSCBCCTTCTTCEEEE------TTEEEEEEEECSS
T ss_pred eEeccCCCCCCccCCCCCCCcEEE------CCEEEEEEEcCCC
Confidence 444432 22334557999999993 4589999976653
No 48
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2
Probab=95.58 E-value=0.032 Score=53.47 Aligned_cols=28 Identities=25% Similarity=0.248 Sum_probs=20.5
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCCCC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANR 411 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~ 411 (594)
-+-.||||++++. ++.++|++.-|...|
T Consensus 186 ~~C~GDSGgPL~~------~~~l~GI~S~g~~~C 213 (240)
T 1sgf_A 186 YTCEHDSGGPLIC------DGILQGITSWGPEPC 213 (240)
T ss_dssp EECCCCTTCEEEE------TTEEEEEECCCCSSC
T ss_pred CCCCCCCcCcEEE------ccEEEEEEEECCCCC
Confidence 3567999999993 458999997663334
No 49
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B
Probab=95.51 E-value=0.07 Score=50.66 Aligned_cols=42 Identities=21% Similarity=0.285 Sum_probs=25.7
Q ss_pred EEEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 367 DFLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 367 dqIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
+++-+.. .+..-.-.||||++++.....+..-.++|++.-|.
T Consensus 180 ~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~~l~Gi~S~g~ 222 (251)
T 3gov_B 180 DMICAGEKEGGKDACAGDSGGPMVTLNRERGQWYLVGTVSWGD 222 (251)
T ss_dssp TEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECS
T ss_pred CcEEecCCCCCCccCCCCCCCeEEeeeCCCCcEEEEEEEEECC
Confidence 3555543 22334567999999985322223337999997764
No 50
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A
Probab=95.48 E-value=0.035 Score=52.79 Aligned_cols=35 Identities=20% Similarity=0.293 Sum_probs=23.4
Q ss_pred EEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 368 FLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 368 qIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
++-+.. .+..-+-.||||++++. ++.++|++.-|.
T Consensus 159 ~~Ca~~~~~~~~~C~GDSGgPL~~------~~~l~Gi~S~g~ 194 (222)
T 1hj8_A 159 MFCAGYLEGGKDSCQGDSGGPVVC------NGELQGVVSWGY 194 (222)
T ss_dssp EEEESCTTSSCBCCTTCTTCEEEE------TTEEEEEEEECS
T ss_pred eEEeccCCCCCccCCCCcccceEE------CCEEEEEEeecC
Confidence 454442 22334567999999993 358999997664
No 51
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}
Probab=95.48 E-value=0.077 Score=50.53 Aligned_cols=28 Identities=21% Similarity=0.135 Sum_probs=20.7
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCCCC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANR 411 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~ 411 (594)
-+-.||||++++. ++.++|++.-|...|
T Consensus 184 ~~C~GDSGgPL~~------~~~l~Gi~S~g~~~C 211 (238)
T 1spj_A 184 DTCVGDSGGPLMC------DGVLQGVTSWGYVPC 211 (238)
T ss_dssp BCCTTCTTCEEEE------TTEEEEEEEECCSST
T ss_pred CCCCCCCCCcEEE------cCEEEEEEEeCCCCC
Confidence 4567999999993 368999997664334
No 52
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2
Probab=95.47 E-value=0.049 Score=51.18 Aligned_cols=41 Identities=22% Similarity=0.257 Sum_probs=27.5
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL 435 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL 435 (594)
-+-.||||++++. ++.++|++.-|.... .. .++|..+...+
T Consensus 176 ~~C~GDsGgPl~~------~~~l~Gi~S~g~~c~--------~~---p~vyt~v~~y~ 216 (224)
T 3rp2_A 176 AAFMGDSGGPLLC------AGVAHGIVSYGHPDA--------KP---PAIFTRVSTYV 216 (224)
T ss_dssp BCCTTTTTCEEEE------TTEEEEEEEECCTTC--------CS---CEEEEEHHHHH
T ss_pred eeccCCCCCeEEE------cceeeEEEEECCCCC--------CC---CcEEEEHHHhH
Confidence 4556999999993 458999997665322 11 36777766554
No 53
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2
Probab=95.39 E-value=0.018 Score=54.66 Aligned_cols=35 Identities=23% Similarity=0.293 Sum_probs=23.3
Q ss_pred EEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 368 FLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 368 qIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
++-+...++.-+-.||||++++. ++..+|++.-|.
T Consensus 162 ~~Ca~~~~~~~~C~GDSGgPL~~------~~~l~GI~S~g~ 196 (222)
T 1eq9_A 162 HICTLTKRGEGACHGDSGGPLVA------NGAQIGIVSFGS 196 (222)
T ss_dssp EEEECCCTTCBCCTTCTTCEEEE------TTEEEEEEEECS
T ss_pred EEeecCCCCCeeeeCCccceEEE------CCEEEEEEEECC
Confidence 44443322334567999999993 358999997664
No 54
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*
Probab=95.36 E-value=0.15 Score=48.77 Aligned_cols=39 Identities=26% Similarity=0.305 Sum_probs=23.8
Q ss_pred EEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 368 FLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 368 qIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
++-+.. .+..-+-.||||++++.. .+..-.++|++.-|.
T Consensus 171 ~~Ca~~~~~~~~~C~GDsGgPl~~~--~~~~~~l~GI~S~g~ 210 (241)
T 2any_A 171 MVCAGYKEGGKDACKGDSGGPLVCK--HNGMWRLVGITSWGE 210 (241)
T ss_dssp EEEECCTTCCCBCCTTCTTCEEEEE--ETTEEEEEEEEEECS
T ss_pred cEeecCCCCCCccCCCCCCCcEEEE--ECCEEEEEEEEEecC
Confidence 454442 223345679999999852 112236899997665
No 55
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=95.35 E-value=0.064 Score=51.00 Aligned_cols=36 Identities=22% Similarity=0.360 Sum_probs=24.1
Q ss_pred EEEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 367 DFLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 367 dqIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
+++-+.. .++.-.-.||||++++. +++++|++.-|.
T Consensus 159 ~~~Ca~~~~~~~~~C~GDSGgPL~~------~~~l~GI~S~g~ 195 (223)
T 3mfj_A 159 NMFCAGYLEGGKDSCQGDSGGPVVC------SGKLQGIVSWGS 195 (223)
T ss_dssp TEEEESCTTSSCBCCTTCTTCEEEE------TTEEEEEEEECS
T ss_pred CEEEccCCCCCCCcCCCCcccceEE------CCEEEEEEEECC
Confidence 3555543 22334567999999993 457999997664
No 56
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Probab=95.25 E-value=0.15 Score=48.43 Aligned_cols=28 Identities=21% Similarity=0.247 Sum_probs=20.6
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCCCC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANR 411 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~ 411 (594)
-+-.||||++++. ++.++|++.-|...|
T Consensus 170 ~~C~GDsGgPL~~------~~~l~Gi~S~g~~~C 197 (223)
T 1lo6_A 170 DSCQGDSGGPLVC------GDHLRGLVSWGNIPC 197 (223)
T ss_dssp BCCTTTTTCEEEE------TTEEEEEEEECCSSC
T ss_pred eeccccCCCcEEe------CCEEEEEEeeCCCCC
Confidence 4567999999993 358999997664333
No 57
>3mmg_A Nuclear inclusion protein A; 3C-type protease, TEV, TVMV, viral protein, hydrolase; 1.70A {Tobacco vein mottling virus} SCOP: b.47.1.0
Probab=95.23 E-value=0.17 Score=50.79 Aligned_cols=72 Identities=15% Similarity=0.126 Sum_probs=54.8
Q ss_pred ccccCCCeEEEEe--ecccceEEEEEEEEEEEeCCCCeEEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEE
Q 040739 327 ISSLIGKQVVKVG--RSSGLTTGTVLAYALEYNDEKGICFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGII 404 (594)
Q Consensus 327 ~~p~lG~~V~KvG--RTTGlT~G~Itai~V~y~~~~G~~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLl 404 (594)
..|..|+.|+.+| +.+....-+|+.-...+..+++ .+++.+|- +..||-|.+++. -..+.+||++
T Consensus 101 R~P~~~E~V~lVg~~fq~k~~~s~vSesS~i~p~~~~-~fWkHwIs--------T~~G~CGlPlVs----~~Dg~IVGiH 167 (241)
T 3mmg_A 101 RQPTIKDRVCMVSTNFQQKSVSSLVSESSHIVHKEDT-SFWQHWIT--------TKDGQAGSPLVS----IIDGNILGIH 167 (241)
T ss_dssp CCCCTTCCEEEEEEEECSSCEEEEEEEEECCEECTTS-SEEEECBC--------CCTTCTTCEEEE----TTTCCEEEEE
T ss_pred CCCCCCCeEEEEEeecccCCccEEECCcceeEEcCCC-CEEEEEcC--------CCCCcCCCeEEE----cCCCcEEEEE
Confidence 5789999999999 5666666777777655554332 46788874 456999999994 4689999999
Q ss_pred EecCCCC
Q 040739 405 WGGTANR 411 (594)
Q Consensus 405 fGGs~~~ 411 (594)
.+++...
T Consensus 168 sl~~~~~ 174 (241)
T 3mmg_A 168 SLTHTTN 174 (241)
T ss_dssp EEEETTT
T ss_pred ecccCCC
Confidence 9988643
No 58
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*
Probab=95.21 E-value=0.077 Score=50.92 Aligned_cols=40 Identities=23% Similarity=0.179 Sum_probs=24.6
Q ss_pred EEEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 367 DFLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 367 dqIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
+++-+.. .+..-.-.||||+.++.. .+..-.++|++.-|.
T Consensus 176 ~~~Ca~~~~~~~~~C~GDsGgPl~~~--~~~~~~lvGI~S~g~ 216 (261)
T 3gyl_B 176 DMVCAGYVEGGKDACQGDSGGPLSCP--VEGLWYLTGIVSWGD 216 (261)
T ss_dssp TEEEESCSSSSCBCCTTTTTCEEEEE--ETTEEEEEEEECCCC
T ss_pred CeEeeCCCCCCCccCCCCCCCeeEEE--eCCEEEEEEEEecCC
Confidence 3555543 233456679999999842 112236999997664
No 59
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*
Probab=95.18 E-value=0.15 Score=48.05 Aligned_cols=23 Identities=30% Similarity=0.056 Sum_probs=18.4
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEe
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWG 406 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfG 406 (594)
-.-.||||++++. ++.++|++.-
T Consensus 167 ~~C~GDSGgPl~~------~~~l~Gi~S~ 189 (218)
T 2z7f_E 167 GVCFGDSGSPLVC------NGLIHGIASF 189 (218)
T ss_dssp BCCTTCTTCEEEE------TTEEEEEEEE
T ss_pred eeCCCcCCCceEE------ccEEEEEEEe
Confidence 4567999999993 4589999966
No 60
>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Probab=95.15 E-value=0.042 Score=52.38 Aligned_cols=36 Identities=22% Similarity=0.352 Sum_probs=23.9
Q ss_pred EEEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 367 DFLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 367 dqIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
+++-+.. .++.-+-.||||++++. ++.++|++.-|.
T Consensus 163 ~~~Ca~~~~~~~~~C~GDSGgPL~~------~~~l~Gi~S~g~ 199 (228)
T 1fxy_A 163 NMFCVGFLEGGKDSCQGDSGGPVVC------NGQLQGVVSWGD 199 (228)
T ss_dssp TEEEESCTTCSCBCCTTCTTCEEEE------TTEEEEEEEECS
T ss_pred CEEEeccCCCCCccccCccccceEE------CCEEEEEEEECC
Confidence 3455443 22334567999999993 358999997664
No 61
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Probab=95.08 E-value=0.077 Score=50.70 Aligned_cols=36 Identities=28% Similarity=0.449 Sum_probs=23.8
Q ss_pred EEEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 367 DFLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 367 dqIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
+++-+.. .+..-+-.||||++++. ++.++|++..|.
T Consensus 172 ~~~Ca~~~~~~~~~C~GDSGGPL~~------~~~l~Gi~S~g~ 208 (240)
T 1mza_A 172 DMVCAGDAKGQKDSCKGDAGGPLIC------KGVFHAIVSGGH 208 (240)
T ss_dssp TEEEEECTTSCCCCCTTCTTCEEEE------TTEEEEEECSSC
T ss_pred CeEeecCCCCCCccCCCCCCCeeEE------CCEEEEEEEECC
Confidence 3454432 22234567999999993 358999997765
No 62
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B
Probab=95.02 E-value=0.093 Score=49.65 Aligned_cols=40 Identities=18% Similarity=0.220 Sum_probs=24.4
Q ss_pred EEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739 368 FLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTA 409 (594)
Q Consensus 368 qIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~ 409 (594)
++-+.. .+..-+-.||||++++.. .+..-.++|++.-|..
T Consensus 170 ~~Ca~~~~~~~~~C~GDsGgPl~~~--~~~~~~l~Gi~S~g~~ 210 (235)
T 4dgj_A 170 MICAGYEEGGIDSCQGDSGGPLMCQ--ENNRWFLAGVTSFGYE 210 (235)
T ss_dssp EEEECCTTCCCBCCTTCTTCEEEEE--ETTEEEEEEEEEECSS
T ss_pred eEeecCCCCCCccCCCCCCCeEEEE--ECCcEEEEEEEEEcCC
Confidence 555542 233345679999999852 1122358999977653
No 63
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Probab=94.98 E-value=0.064 Score=51.03 Aligned_cols=28 Identities=25% Similarity=0.281 Sum_probs=20.5
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCCCC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANR 411 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~ 411 (594)
-.-.||||++++. ++.++|++.-|...|
T Consensus 170 ~~C~GDSGgPL~~------~~~l~Gi~S~g~~~C 197 (224)
T 2qxi_A 170 NACNGDSGGPLVC------RGTLQGLVSWGTFPC 197 (224)
T ss_dssp BCCTTCTTCEEEE------TTEEEEEEEECCSSS
T ss_pred ccCCCCccccEEE------CCEEEEEEEeCCCCC
Confidence 4567999999993 458999997663333
No 64
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A
Probab=94.94 E-value=0.07 Score=50.24 Aligned_cols=27 Identities=30% Similarity=0.396 Sum_probs=20.5
Q ss_pred CCCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739 377 TFDLEGDSGSLILMKGENGEKPRPIGIIWGGTA 409 (594)
Q Consensus 377 ~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~ 409 (594)
.-+-.||||++++. ++.++|++.-|..
T Consensus 177 ~~~C~gDsGgPl~~------~~~l~Gi~S~g~~ 203 (227)
T 3fzz_A 177 GASFEEDSGGPLVC------KRAAAGIVSYGQT 203 (227)
T ss_dssp BCCTTTTTTCEEEE------TTEEEEEEEECCT
T ss_pred CcccccCCccceEE------ecCCcEEEEECCC
Confidence 34567999999993 4589999976653
No 65
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*
Probab=94.79 E-value=0.12 Score=48.87 Aligned_cols=42 Identities=24% Similarity=0.283 Sum_probs=25.1
Q ss_pred EEEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 367 DFLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 367 dqIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
+++-+.. .+..-+-.||||++++.....+..-.++|++.-|.
T Consensus 171 ~~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~Gi~S~g~ 213 (242)
T 3tvj_B 171 NMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGS 213 (242)
T ss_dssp TEEEESCTTCCSBCCTTCTTCEEEEEETTTTEEEEEEEEEEEE
T ss_pred CeEEECCCCCCCccccCCCCCeEEEEeCCCCcEEEEEEEEeCC
Confidence 3555542 22334567999999985322222335899996663
No 66
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=94.67 E-value=0.11 Score=49.29 Aligned_cols=37 Identities=24% Similarity=0.345 Sum_probs=24.9
Q ss_pred EEEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 367 DFLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 367 dqIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
+++-+.. .+..-+-.||||++++ ..++.++|++.-|.
T Consensus 162 ~~~Ca~~~~~~~~~C~GDSGgPL~-----~~~g~l~Gi~S~g~ 199 (224)
T 1pq7_A 162 QMFCAGVSSGGKDSCQGDSGGPIV-----DSSNTLIGAVSWGN 199 (224)
T ss_dssp TEEEECCTTCCCBCCTTCTTCEEE-----CTTCCEEEEEEECS
T ss_pred CeEEeecCCCCCCCCcCCCCcceE-----CcCCeEEEEEEeCC
Confidence 3555542 2233456799999999 44668999997665
No 67
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=94.59 E-value=0.09 Score=52.05 Aligned_cols=42 Identities=10% Similarity=0.015 Sum_probs=24.7
Q ss_pred CCCccceEEeeccCCCCCceEEEE-EecCCCCCccccccCCCCCcceEeechHHHH
Q 040739 381 EGDSGSLILMKGENGEKPRPIGII-WGGTANRGRLKLKIGQPPENWTSGVDLGRLL 435 (594)
Q Consensus 381 ~GDSGSlVl~~~~~d~~~~aVGLl-fGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL 435 (594)
.||||++++.. .+..-.++||+ ||+... +....+|+.+...+
T Consensus 226 ~gDSGgPlv~~--~~~~~~l~GIvS~g~c~~-----------~~~p~vyt~V~~y~ 268 (283)
T 3f1s_B 226 HWMDGSVVTRE--HRGSWFLTGVLGSQPVGG-----------QAHMVLVTKVSRYS 268 (283)
T ss_dssp GBCTTCEEEEE--CSSCEEEEEEECCCSGGG-----------CSSEEEEEEGGGGH
T ss_pred CCCCCCcEEEE--ECCEEEEEEEEEeCCCCC-----------CCcceEEEEhHHhH
Confidence 68999999852 12223489999 543211 23345776665544
No 68
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*
Probab=94.55 E-value=0.36 Score=45.61 Aligned_cols=31 Identities=23% Similarity=0.250 Sum_probs=20.6
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTA 409 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~ 409 (594)
-+-.||||++++.. ..+....++|++.-|..
T Consensus 185 ~~C~GDsGgPl~~~-~~~g~~~l~Gi~S~g~~ 215 (241)
T 3ncl_A 185 DSCQGDSGGPLSSV-EADGRIFQAGVVSWGDG 215 (241)
T ss_dssp BCCTTCTTCEEEEE-CTTSCEEEEEEEEECSS
T ss_pred ccCCCcCCCCEEEE-cCCCcEEEEEEEEECCC
Confidence 45679999999842 11223358999977653
No 69
>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A
Probab=94.50 E-value=0.1 Score=49.34 Aligned_cols=37 Identities=16% Similarity=0.263 Sum_probs=23.8
Q ss_pred EEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecCCCC
Q 040739 368 FLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANR 411 (594)
Q Consensus 368 qIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~ 411 (594)
++-+..+ ..-.-.||||++++. ++.++|++.-|...|
T Consensus 168 ~~Ca~~~-~~~~C~GDsGgPL~~------~~~l~Gi~s~g~~~C 204 (228)
T 2xw9_A 168 LMCAESN-RRDSCKGDAGGPLVC------GGVLEGVVTSGSRVC 204 (228)
T ss_dssp EEEECCS-SCBCCTTCTTCEEEE------TTEEEEEECCSCCCS
T ss_pred EEecCCC-CCccCCCCCcccEEE------CCEEEEEEeecCCcC
Confidence 4444432 223557999999993 358999996555334
No 70
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A
Probab=94.41 E-value=0.31 Score=46.83 Aligned_cols=30 Identities=20% Similarity=0.226 Sum_probs=21.2
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCCCC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANR 411 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~ 411 (594)
-+-.||||++++. +.+..++|++.-|...|
T Consensus 176 ~~C~GDSGgPL~~----~~~~~l~Gi~S~g~~~C 205 (240)
T 2zgc_A 176 APCKGDSGGPLVC----GKGRVLAGVLSFSSRVC 205 (240)
T ss_dssp BCCTTCTTCEEEE----TTTTEEEEEECCCCSST
T ss_pred ccCCCCccCeeEE----CCCCEEEEEEEECCCCC
Confidence 4567999999994 23358999996653334
No 71
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2
Probab=94.40 E-value=0.074 Score=50.58 Aligned_cols=22 Identities=32% Similarity=0.463 Sum_probs=17.9
Q ss_pred CCCccceEEeeccCCCCCceEEEEEecC
Q 040739 381 EGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 381 ~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
.||||++++. ++.++|++.-|.
T Consensus 179 ~GDsGgPL~~------~~~l~Gi~S~gc 200 (227)
T 1euf_A 179 SGDSGGPLVC------NGVAQGIVSYGR 200 (227)
T ss_dssp TTCTTCEEEE------TTEEEEEEEECC
T ss_pred ccCCCCceEE------CCEEEEEEEEeC
Confidence 8999999993 458999987663
No 72
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0
Probab=94.36 E-value=0.068 Score=50.23 Aligned_cols=26 Identities=15% Similarity=0.069 Sum_probs=19.8
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTA 409 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~ 409 (594)
-+-.||||++++. ++.++|++.-|..
T Consensus 177 ~~C~GDsGgPl~~------~~~l~Gi~S~g~~ 202 (228)
T 3h7o_A 177 SLESGDAGDPTVQ------QDTLVGVAAYFPK 202 (228)
T ss_dssp CCCGGGTTCEEEE------TTEEEEEECCCTT
T ss_pred cCCCCCCCCccee------cCeEEEEEeecCc
Confidence 4557999999993 4569999976653
No 73
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2
Probab=94.28 E-value=0.46 Score=45.25 Aligned_cols=40 Identities=20% Similarity=0.258 Sum_probs=24.9
Q ss_pred EEEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 367 DFLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 367 dqIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
+++-+.. .+..-+-.||||++++.. .+....++|++.-|.
T Consensus 171 ~~~Ca~~~~~~~~~C~GDSGgPL~~~--~~~~~~l~Gi~S~g~ 211 (237)
T 2f91_A 171 SMICAGVPEGGKDSCQGDSGGPLAAS--DTGSTYLAGIVSWGY 211 (237)
T ss_dssp TEEEECCTTCCCBCCTTCTTCEEEEC--TTSSCEEEEEEEEES
T ss_pred CeEEEecCCCCCCCCCCcCCCCeEEe--cCCCEEEEEEEEecC
Confidence 3454443 223345679999999852 223347999997664
No 74
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Probab=94.21 E-value=0.15 Score=48.77 Aligned_cols=40 Identities=25% Similarity=0.320 Sum_probs=24.4
Q ss_pred EEEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 367 DFLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 367 dqIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
+++-+.. .+..-.-.||||+.++.. .+..-.++|++.-|.
T Consensus 173 ~~~Ca~~~~~~~~~C~GDSGgPL~~~--~~g~~~l~GI~S~g~ 213 (248)
T 2r0l_A 173 NMLCAGYFDCKSDACQGDSGGPLACE--KNGVAYLYGIISWGD 213 (248)
T ss_dssp TEEEESCSSSCCBCCTTCTTCEEEEE--ETTEEEEEEEEEECS
T ss_pred CEEeECCCCCCCcCCCCccCCeEEEE--ECCcEEEEEEEEeCC
Confidence 3555543 223345679999999952 112226899997665
No 75
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*
Probab=94.21 E-value=0.56 Score=46.57 Aligned_cols=42 Identities=21% Similarity=0.248 Sum_probs=25.3
Q ss_pred EEEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 367 DFLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 367 dqIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
+++-+.. .+..-+-.||||+.++.....+..-.++|++.-|.
T Consensus 181 ~~iCag~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~ 223 (290)
T 1fiw_A 181 TNVCAGYPEGKIDTCQGDSGGPLMCKDSAENSYVVVGITSWGV 223 (290)
T ss_dssp TEEEEECTTCSSBCCTTCTTCEEEEECSSSSCEEEEEEEEECS
T ss_pred CEEEEecCCCCCeeCCCCCchheEEEECCCCCEEEEEEEEECC
Confidence 3555442 23334567999999995322122336899997664
No 76
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...
Probab=94.18 E-value=0.089 Score=49.94 Aligned_cols=30 Identities=27% Similarity=0.289 Sum_probs=20.7
Q ss_pred CCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 377 TFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 377 ~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
.-+-.||||++++.. .+....++|++.-|.
T Consensus 191 ~~~C~GDSGgPl~~~--~~~~~~l~Gi~S~g~ 220 (247)
T 3mhw_U 191 TDSCQGDSGGPLVCS--LQGRMTLTGIVSWGR 220 (247)
T ss_dssp CBCCTTCTTCEEEEE--ETTEEEEEEEEEECS
T ss_pred CccCCCCCCCeEEEE--ECCCEEEEEEEEECC
Confidence 345689999999852 122336899997664
No 77
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}
Probab=94.16 E-value=0.057 Score=50.78 Aligned_cols=37 Identities=16% Similarity=0.227 Sum_probs=24.4
Q ss_pred EEEEECCC-CCCCCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739 367 DFLVVGEN-QQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTA 409 (594)
Q Consensus 367 dqIVt~~~-g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~ 409 (594)
+++-+... +..-.-.||||++++. ++.++|++.-|..
T Consensus 168 ~~~Ca~~~~~~~~~C~GDsGgPl~~------~~~l~Gi~S~g~~ 205 (235)
T 3h7t_A 168 GVFCAGGEYDETYIGYGDAGDPAVQ------NGTLVGVASYISS 205 (235)
T ss_dssp TEEEECBTTTTBBCCTTCTTCEEEE------TTEEEEEECCCTT
T ss_pred CeEecCCCCCCCccccCCCCCceee------CCeEEEEEEecCC
Confidence 35554432 2334557999999993 4569999976653
No 78
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}
Probab=94.11 E-value=0.3 Score=46.29 Aligned_cols=30 Identities=23% Similarity=0.246 Sum_probs=19.9
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
-+-.||||++++.. ..+..-.++|++.-|.
T Consensus 176 ~~C~GDsGgPL~~~-~~~~~~~l~GI~S~g~ 205 (232)
T 2oq5_A 176 DACQGDSGGPLVSS-DARDIWYLAGIVSWGD 205 (232)
T ss_dssp BCCTTCTTCEEEEE-CTTSCEEEEEEEEECS
T ss_pred ccCCCCCCCcEEEE-CCCCCEEEEEEEEeCC
Confidence 45579999999842 1112236899997665
No 79
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Probab=94.10 E-value=0.16 Score=48.22 Aligned_cols=34 Identities=29% Similarity=0.438 Sum_probs=22.9
Q ss_pred EEEECCC-CCCCCCCCCccceEEeeccCCCCCceEEEEEec
Q 040739 368 FLVVGEN-QQTFDLEGDSGSLILMKGENGEKPRPIGIIWGG 407 (594)
Q Consensus 368 qIVt~~~-g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGG 407 (594)
++-+... +..-+-.||||++++. ++.++|++.-|
T Consensus 166 ~~Ca~~~~~~~~~C~GDSGgPL~~------~~~l~Gi~S~g 200 (227)
T 1iau_A 166 ELCVGDPEIKKTSFKGDSGGPLVC------NKVAQGIVSYG 200 (227)
T ss_dssp EEEESCTTSCCBCCTTCTTSEEEE------TTEEEEEEEEE
T ss_pred EEEeECCCCCCeeeecCCCchheE------eeEEEEEEeEe
Confidence 4554432 2334567999999993 35899998655
No 80
>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*
Probab=93.93 E-value=0.094 Score=49.77 Aligned_cols=35 Identities=29% Similarity=0.480 Sum_probs=23.4
Q ss_pred EEEECCC-CCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 368 FLVVGEN-QQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 368 qIVt~~~-g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
++-+... +..-+-.||||++++. ++.++|++.-|.
T Consensus 164 ~~Ca~~~~~~~~~C~GDSGgPL~~------~~~l~Gi~S~g~ 199 (224)
T 1cgh_A 164 QICVGDRRERKAAFKGDSGGPLLC------NNVAHGIVSYGK 199 (224)
T ss_dssp EEEECCTTSCCBCCTTCTTCEEEE------TTEEEEEEEECC
T ss_pred eEeeccCCCCCeEeeCCCccceEE------ccEEEEEEEEEC
Confidence 4544432 2334567999999993 358999997655
No 81
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Probab=93.92 E-value=0.37 Score=45.25 Aligned_cols=58 Identities=21% Similarity=0.340 Sum_probs=32.6
Q ss_pred EEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739 368 FLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL 435 (594)
Q Consensus 368 qIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL 435 (594)
++-+.. .+..-.-.||||++++.. ..+..-.++|++.-|.. |+. +....+|..+...+
T Consensus 156 ~~Ca~~~~~~~~~C~GDsGgPl~~~-~~~~~~~l~Gi~S~g~~-C~~--------~~~p~vyt~V~~~~ 214 (224)
T 3beu_A 156 MICAGYDTKQEDTCQGDSGGPMFRK-DNADEWVQVGIVSWGEG-CAR--------KGKYGVYTEVSTFA 214 (224)
T ss_dssp EEEECCSSSSCBCCTTCTTCEEEEE-CTTSCEEEEEEEEEESS-SSC--------TTCCEEEEEHHHHH
T ss_pred eEEeccCCCCCcCCCCcCCCeeEEe-cCCCCEEEEEEeccCCC-CCC--------CCCCeEEEEHHHHH
Confidence 555443 223345679999999853 11122368999976653 311 12346777766544
No 82
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Probab=93.91 E-value=0.34 Score=46.31 Aligned_cols=29 Identities=24% Similarity=0.330 Sum_probs=20.4
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
-+-.||||++++.. .+..-.++|++..|.
T Consensus 173 ~~C~GDSGgPL~~~--~~~~~~l~Gi~S~g~ 201 (240)
T 1si5_H 173 GPCEGDYGGPLVCE--QHKMRMVLGVIVPGR 201 (240)
T ss_dssp BCCTTCTTCEEEEE--CSSSEEEEEEECSCS
T ss_pred EeccCCCCCcEEEE--ECCcEEEEEEEEECC
Confidence 45579999999953 122337899997665
No 83
>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Probab=93.90 E-value=0.19 Score=47.96 Aligned_cols=39 Identities=18% Similarity=0.015 Sum_probs=24.2
Q ss_pred EEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 368 FLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 368 qIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
++-+.. .++.-+-.||||++++.. .+..-.++|++..|.
T Consensus 161 ~~Ca~~~~~~~~~C~GDSGgPL~~~--~~~~~~l~Gi~S~g~ 200 (234)
T 2asu_B 161 EMCTEGLLAPVGACEGDYGGPLACF--THNSWVLEGIIIPNR 200 (234)
T ss_dssp EEEECCCSSCCBCCTTCTTCEEEEE--ETTEEEEEEEECCCS
T ss_pred eEeecCCCCCCeeccCCCCCceEEE--ECCeEEEEEEEEcCC
Confidence 444433 223345679999999852 122337899997665
No 84
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Probab=93.87 E-value=0.14 Score=48.67 Aligned_cols=35 Identities=20% Similarity=0.181 Sum_probs=23.1
Q ss_pred EEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 368 FLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 368 qIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
++-+...++.-+-.||||++++. ++.++|+..-|.
T Consensus 162 ~~Ca~~~~~~~~C~GDSGgPL~~------~~~l~Gi~S~g~ 196 (226)
T 1azz_A 162 NICIDSTGGKGTCNGDSGGPLNY------NGLTYGITSFGA 196 (226)
T ss_dssp EEEECCTTTCBCCTTCTTCEEEE------TTEEEEEEEEEE
T ss_pred eEeecCCCCCccCCCCCCcceEE------CCEEEEEEEEEC
Confidence 44443323334567999999992 458999996554
No 85
>2jde_A Urokinase-type plasminogen activator; plasminogen activation, EGF-like domain, blood coagulation, inhibitor complex, UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Probab=93.81 E-value=0.13 Score=50.03 Aligned_cols=30 Identities=27% Similarity=0.289 Sum_probs=20.6
Q ss_pred CCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 377 TFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 377 ~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
.-+-.||||+.++.. .+....++|++.-|.
T Consensus 214 ~~~C~GDSGgPL~~~--~~~~~~l~GI~S~g~ 243 (276)
T 2jde_A 214 TDSCQGDSGGPLVCS--LQGRMTLTGIVSWGR 243 (276)
T ss_dssp CBCCTTCTTCEEEEE--ETTEEEEEEEEEECS
T ss_pred CcccccccCcceEEE--eCCcEEEEEEEEECC
Confidence 356689999999842 122335899997664
No 86
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Probab=93.76 E-value=0.42 Score=45.98 Aligned_cols=30 Identities=27% Similarity=0.319 Sum_probs=20.5
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTA 409 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~ 409 (594)
-+-.||||++++... +..-.++|++.-|..
T Consensus 189 ~~C~GDSGgPL~~~~--~~~~~l~GI~S~g~~ 218 (245)
T 1t8o_A 189 SSCMGDSGGPLVCKK--NGAWTLVGIVSWGSS 218 (245)
T ss_dssp BCCTTCTTCEEEEEE--TTEEEEEEEEEECCT
T ss_pred ccCcccCcCCEEEEE--CCEEEEEEEEEeCCC
Confidence 456799999998521 222378999976553
No 87
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...
Probab=93.65 E-value=0.4 Score=45.69 Aligned_cols=39 Identities=26% Similarity=0.280 Sum_probs=23.8
Q ss_pred EEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 368 FLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 368 qIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
++-+.. .+..-+-.||||++++.. .+..-.++|++.-|.
T Consensus 171 ~~Ca~~~~~~~~~C~GDSGgPL~~~--~~~~~~l~GI~S~g~ 210 (238)
T 3bg8_A 171 MICAGYREGGKDACKGDSGGPLSCK--HNEVWHLVGITSWGE 210 (238)
T ss_dssp EEEECCTTCCCBCCTTCTTCEEEEE--ETTEEEEEEEEEECS
T ss_pred eEeecCCCCCCCcCCCCCCcceEEE--ECCeEEEEEEEEECC
Confidence 555543 223345679999999852 112235899997665
No 88
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2
Probab=93.49 E-value=0.42 Score=45.78 Aligned_cols=41 Identities=22% Similarity=0.327 Sum_probs=24.8
Q ss_pred EEEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 367 DFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 367 dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
+++-+...+..-+-.||||++++... .+..-.++|++.-|.
T Consensus 171 ~~~Ca~~~~~~~~C~GDSGgPL~~~~-~~g~~~l~Gi~S~g~ 211 (241)
T 1bru_P 171 NMICAGGDGIISSCNGDSGGPLNCQG-ANGQWQVHGIVSFGS 211 (241)
T ss_dssp TEEEECCSSSSBCCTTCTTCEEEEEC-TTSCEEEEEEEEECB
T ss_pred ceEeecCCCCCccCCCCCCCcEEEEC-CCCCEEEEEEEEEcC
Confidence 35555433333456799999998531 112237899996554
No 89
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A
Probab=93.30 E-value=0.26 Score=48.50 Aligned_cols=40 Identities=25% Similarity=0.320 Sum_probs=24.6
Q ss_pred EEEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 367 DFLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 367 dqIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
+++-+.. .+..-+-.||||+.++.. .+..-.++|++.-|.
T Consensus 208 ~~iCa~~~~~~~~~C~GDSGgPL~~~--~~g~~~l~GIvS~g~ 248 (283)
T 1yc0_A 208 NMLCAGYFDCKSDACQGDSGGPLACE--KNGVAYLYGIISWGD 248 (283)
T ss_dssp TEEEESCSSSCCBCCTTCTTCEEEEE--ETTEEEEEEEEEECS
T ss_pred CEEeeCCCCCCCccCCCCCCCceEEE--ECCcEEEEEEEEECC
Confidence 4555543 223345679999999852 112236899997665
No 90
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=93.28 E-value=0.11 Score=51.86 Aligned_cols=24 Identities=13% Similarity=0.079 Sum_probs=16.2
Q ss_pred CCCCccceEEeeccCCCCCceEEEEE
Q 040739 380 LEGDSGSLILMKGENGEKPRPIGIIW 405 (594)
Q Consensus 380 ~~GDSGSlVl~~~~~d~~~~aVGLlf 405 (594)
..||||++++.. .+..-.++||+.
T Consensus 266 ~~gDsGgPl~~~--~~~~~~l~Gi~S 289 (317)
T 3h5c_B 266 MHWMDGSVVTRE--HRGSWFLTGVLG 289 (317)
T ss_dssp CCCCTTCEEEEE--ETTEEEEEEEEC
T ss_pred cCCCCCCCEEEe--cCCEEEEEEEEE
Confidence 478999999852 112234899994
No 91
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=93.09 E-value=0.73 Score=43.62 Aligned_cols=47 Identities=19% Similarity=0.100 Sum_probs=28.8
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL 435 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL 435 (594)
-+-.||||++++... .+..-.++|++.-|.. |+ +....+|..+...+
T Consensus 182 ~~C~GDsGgPL~~~~-~~~~~~l~Gi~S~g~~-C~---------~~~p~vyt~v~~~~ 228 (238)
T 1ym0_A 182 DSCQGDSGGPLSVKD-GSGIFSLVGIVSWGIG-CA---------SGYPGVYSRVGFHA 228 (238)
T ss_dssp BCCTTTTTCEEEEEC-TTCCEEEEEEEEECSS-SS---------SSSCEEEEEHHHHH
T ss_pred ccCCCccCCeeEEEC-CCCCEEEEEEEeECCC-CC---------CCCCcEEEEHHHhH
Confidence 456799999998531 1122368999976642 31 12346777776554
No 92
>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*
Probab=92.98 E-value=0.78 Score=44.12 Aligned_cols=40 Identities=23% Similarity=0.276 Sum_probs=24.2
Q ss_pred EEEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 367 DFLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 367 dqIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
+++-+.. .+..-+-.||||+.++.. .+..-.++|++.-|.
T Consensus 173 ~~~Cag~~~~~~~~C~GDSGGPL~~~--~~g~~~l~GI~S~g~ 213 (250)
T 1aut_C 173 NMLCAGILGDRQDACEGDSGGPMVAS--FHGTWFLVGLVSWGE 213 (250)
T ss_dssp TEEEECCTTCCCBCCTTCTTCEEEEE--ETTEEEEEEEEEECS
T ss_pred CEEEeCCCCCCCCCCCCCCchheEEE--ECCeEEEEEEEEECC
Confidence 3555543 223345679999999842 112225899997665
No 93
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Probab=92.85 E-value=0.35 Score=45.94 Aligned_cols=38 Identities=16% Similarity=0.114 Sum_probs=23.4
Q ss_pred EEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 368 FLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 368 qIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
++-+...+ .-+-.||||++++.. .+..-.++|++.-|.
T Consensus 172 ~~Ca~~~~-~~~C~GDSGgPL~~~--~~g~~~l~Gi~S~g~ 209 (236)
T 1elt_A 172 MVCAGGGA-NSGCNGDSGGPLNCQ--VNGSYYVHGVTSFVS 209 (236)
T ss_dssp EEEECCSS-CBCCTTCTTCEEEEE--ETTEEEEEEEEEECC
T ss_pred eEEecCCC-CccCCCCCCCeeEEE--ECCEEEEEEEEEEeC
Confidence 44444322 345679999999852 122237999997653
No 94
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Probab=92.84 E-value=0.83 Score=43.36 Aligned_cols=25 Identities=32% Similarity=0.250 Sum_probs=19.2
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
-+-.||||++++. ++.++|+..-|.
T Consensus 178 ~~C~GDSGgPL~~------~~~l~GI~S~g~ 202 (234)
T 1orf_A 178 DSCNGDSGSPLLC------EGVFRGVTSFGL 202 (234)
T ss_dssp BCCTTCTTCEEEE------TTEEEEEEEECC
T ss_pred cCCCCCCCCeEEE------CCEEEEEEEEcC
Confidence 4567999999993 358999996554
No 95
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A
Probab=92.53 E-value=0.56 Score=45.04 Aligned_cols=40 Identities=23% Similarity=0.203 Sum_probs=24.4
Q ss_pred EEEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 367 DFLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 367 dqIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
+++-+.. .++.-+-.||||++++.. .+....++|++.-|.
T Consensus 179 ~~~Ca~~~~~~~~~C~GDSGgPL~~~--~~~~~~l~GI~S~g~ 219 (247)
T 1ddj_A 179 TELCAGHLAGGTDSCQGDAGGPLVCF--EKDKYILQGVTSWGL 219 (247)
T ss_dssp TEEEESCSSSCCCBCCSCTTCEEEEE--CSSSEEEEEEECGGG
T ss_pred CeEeecCCCCCCccccCcCcCcEEEE--ECCcEEEEEEEEECC
Confidence 3555543 223345679999999852 122336899997654
No 96
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Probab=92.41 E-value=0.4 Score=45.70 Aligned_cols=39 Identities=15% Similarity=0.134 Sum_probs=23.8
Q ss_pred EEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 368 FLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 368 qIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
++-+...+ .-+-.||||++++... .+..-.++|++.-|.
T Consensus 172 ~~Ca~~~~-~~~C~GDsGgPL~~~~-~~~~~~l~Gi~S~g~ 210 (240)
T 1fon_A 172 MVCAGGDT-RSGCNGDSGGPLNCPA-ADGSWQVHGVTSFVS 210 (240)
T ss_dssp EEEECCSS-SCSTTSCTTCEEEEEC-SSSCEEEEEEEEECC
T ss_pred eEeecCCC-CcccCCCCCCeEEeEc-CCCCEEEEEEEEEcC
Confidence 45444322 3456799999998531 112237899997654
No 97
>1vcp_A Semliki forest virus capsid protein; virus coat protein, polyprotein, transmembrane, glycoprotein, nucleocapsid protein, viral protein; 3.00A {Semliki forest virus} SCOP: b.47.1.3 PDB: 1dyl_A 1vcq_A
Probab=92.37 E-value=0.16 Score=46.49 Aligned_cols=29 Identities=34% Similarity=0.549 Sum_probs=26.4
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCCCC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANR 411 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~ 411 (594)
...+||||..|+ |+++++|+|+.||....
T Consensus 95 ~g~~GdSGrpI~-----Dn~GrVVaIVlGG~~eg 123 (149)
T 1vcp_A 95 AGKPGDSGRPIF-----DNKGRVVAIVLGGANEG 123 (149)
T ss_dssp SCCTTCTTCEEE-----CTTSCEEEEEEEEEECS
T ss_pred CCCCCCCCCccC-----cCCCcEEEEEecCCCCC
Confidence 688999999999 99999999999998654
No 98
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...
Probab=92.32 E-value=0.63 Score=44.41 Aligned_cols=39 Identities=15% Similarity=0.108 Sum_probs=23.9
Q ss_pred EEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 368 FLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 368 qIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
++-+...+..-+-.||||++++.. .+..-.++|++.-|.
T Consensus 172 ~~Ca~~~~~~~~C~GDSGgPL~~~--~~g~~~l~Gi~S~g~ 210 (240)
T 1gvk_B 172 MVCAGGDGVRSGCQGDSGGPLHCL--VNGQYAVHGVTSFVS 210 (240)
T ss_dssp EEEECCSSSCBCCTTCTTCEEEEE--ETTEEEEEEEEEECB
T ss_pred eEeecCCCCCcccCCCCcCceEEE--ECCcEEEEEEEEEeC
Confidence 554443233345679999999852 122237899997653
No 99
>1svp_A Sindbis virus capsid protein; chymotrypsin-like serine, mutant, coat protein, viral protein; 2.00A {Sindbis virus} SCOP: b.47.1.3 PDB: 1kxb_A 1kxa_A 2snw_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=92.21 E-value=0.16 Score=46.96 Aligned_cols=29 Identities=28% Similarity=0.522 Sum_probs=26.4
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCCCC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANR 411 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~ 411 (594)
...+||||-+|+ |.++++|+|+.||....
T Consensus 104 vG~~GDSGRpI~-----DN~GrVVaivlgg~~eg 132 (161)
T 1svp_A 104 VGGRGDAGRPIM-----DNSGRVVAIVLGGADEG 132 (161)
T ss_dssp SCCTTCTTCEEE-----CTTSCEEEEEEEEEECS
T ss_pred CCCCCCCCCccC-----cCCCcEEEEEecCCCCC
Confidence 688999999999 99999999999998654
No 100
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=92.08 E-value=0.58 Score=47.56 Aligned_cols=42 Identities=21% Similarity=0.370 Sum_probs=25.4
Q ss_pred EEEEECCC-CCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 367 DFLVVGEN-QQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 367 dqIVt~~~-g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
+++-+... +..-+-.||||++++.....+..-.++|++.-|.
T Consensus 262 ~~iCAg~~~~~~d~C~GDSGGPL~~~~~~~~~~~l~GIvS~G~ 304 (329)
T 1md8_A 262 NMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGI 304 (329)
T ss_dssp TEEEESCTTCSCBCCTTTTTCEEEEEETTTTEEEEEEEEEECS
T ss_pred CeEeeecCCCCCcCCCCccccceEEEECCCCcEEEEEEEEECC
Confidence 45555542 2345667999999985311222235899996554
No 101
>1ep5_B Capsid protein C, coat protein C; beta barrel, hydrolase; 2.30A {Venezuelan equine encephalitis virus} SCOP: b.47.1.3 PDB: 1ep6_A 3j0c_C
Probab=91.99 E-value=0.19 Score=46.41 Aligned_cols=29 Identities=34% Similarity=0.603 Sum_probs=26.3
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCCCC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANR 411 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~ 411 (594)
...+||||..|+ |+++++|+|+.||....
T Consensus 102 ~g~~GdSGrpI~-----Dn~GrVVaIVlGGa~eg 130 (157)
T 1ep5_B 102 VGAKGDSGRPIL-----DNQGRVVAIVLGGVNEG 130 (157)
T ss_dssp CCCTTCTTCEEE-----CTTSCEEEEEEEEEEET
T ss_pred CCCCCCCCCccC-----cCCCcEEEEEecCCCCC
Confidence 688999999999 99999999999998653
No 102
>2yew_A Capsid protein, coat protein; alphavirus, molecular dynamics; 5.00A {Barmah forest virus}
Probab=91.95 E-value=0.13 Score=51.07 Aligned_cols=29 Identities=28% Similarity=0.485 Sum_probs=26.7
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCCCC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANR 411 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~ 411 (594)
...+||||-.|| |+++++|+|+.||.+..
T Consensus 199 ~G~~GDSGRpI~-----DN~GrVVaIVLGGanEG 227 (253)
T 2yew_A 199 SGKPGDSGRPIF-----DNTGKVVAIVLGGANEG 227 (253)
T ss_dssp SCCSSCTTCEEE-----CSSCBEEEEEEEEEECS
T ss_pred CCCCCCCCCccc-----cCCCcEEEEEecCCCcC
Confidence 688999999999 99999999999998764
No 103
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Probab=91.89 E-value=0.33 Score=45.94 Aligned_cols=37 Identities=19% Similarity=0.187 Sum_probs=24.1
Q ss_pred EEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 368 FLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 368 qIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
++-+...++.-.-.||||++++. ..++.++|++.-|.
T Consensus 164 ~~Ca~~~~~~~~C~GDSGgPl~~----~~~~~l~Gi~S~g~ 200 (230)
T 2hlc_A 164 TICGDTSDGKSPCFGDSGGPFVL----SDKNLLIGVVSFVS 200 (230)
T ss_dssp EEEECCTTSCBCCTTCTTCEEEE----GGGTEEEEEEEECC
T ss_pred eEEecCCCCCCcCCCCCCCeeEE----CcCCEEEEEEEEeC
Confidence 44444323334567999999985 23458999997654
No 104
>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}
Probab=91.84 E-value=0.6 Score=45.11 Aligned_cols=32 Identities=25% Similarity=0.292 Sum_probs=21.3
Q ss_pred CCCCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739 376 QTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTA 409 (594)
Q Consensus 376 ~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~ 409 (594)
..-+-.||||+.++.. .+....++|++.-|..
T Consensus 213 ~~~~C~GDSGGPLv~~--~~~~~~lvGIvS~G~~ 244 (276)
T 2vnt_A 213 KTDSCQGDSGGPLVCS--LQGRMTLTGIVSWGRG 244 (276)
T ss_dssp CCCCCTTCTTCEEEEE--ETTEEEEEEEEEECSS
T ss_pred CCCCCCCCCCCeEEEe--eCCeEEEEEEEEECCC
Confidence 3345679999999852 1223458999976653
No 105
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Probab=91.77 E-value=0.59 Score=44.66 Aligned_cols=38 Identities=26% Similarity=0.345 Sum_probs=23.2
Q ss_pred EEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 368 FLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 368 qIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
++-+... +.-+-.||||++++.. .+..-.++|++.-|.
T Consensus 179 ~~Ca~~~-~~~~C~GDSGgPL~~~--~~g~~~l~GI~S~g~ 216 (245)
T 2f9n_A 179 MLCAGNS-QRDSCQGDSGGPLVCK--VNGTWLQAGVVSWGE 216 (245)
T ss_dssp EEEECCS-SSBCCTTCTTCEEEEE--ETTEEEEEEEEEECS
T ss_pred cEeecCC-CCCcCCCCCCCceEEE--ECCEEEEEEEEEeCC
Confidence 4544432 2235679999999852 112226899997665
No 106
>1lvm_A Catalytic domain of the nuclear inclusion protein A (NIA); beta barrel, chymotrypsin-type cystein protease, enzyme- peptide complex; 1.80A {Tobacco etch virus} SCOP: b.47.1.3 PDB: 1lvb_A 1q31_A
Probab=91.69 E-value=1 Score=44.88 Aligned_cols=72 Identities=13% Similarity=0.178 Sum_probs=52.3
Q ss_pred ccccCCCeEEEEee--cccceEEEEEEEEEEEeCCCCeEEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEE
Q 040739 327 ISSLIGKQVVKVGR--SSGLTTGTVLAYALEYNDEKGICFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGII 404 (594)
Q Consensus 327 ~~p~lG~~V~KvGR--TTGlT~G~Itai~V~y~~~~G~~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLl 404 (594)
..|..++.|+.+|. .+....-+|+.-.+.+..+.+ .+++.+|- +..||=|.+++. -.++.+||++
T Consensus 109 R~P~~~e~V~lVg~~fq~k~~~s~vSesS~i~p~~~~-~fWkHwIs--------T~~G~CGlPlVs----~~Dg~IVGiH 175 (229)
T 1lvm_A 109 REPQREERICLVTTNFQTKSMSSMVSDTSCTFPSSDG-IFWKHWIQ--------TKDGQCGSPLVS----TRDGFIVGIH 175 (229)
T ss_dssp CCCCTTCEEEEEEEECSSSSCEEEECCCEECEEETTT-TEEEECBC--------CCTTCTTCEEEE----TTTCCEEEEE
T ss_pred CCCCCCCeEEEEEeEeecCCccEEECCcceeEecCCC-CEeEEEee--------CCCCcCCCcEEE----CCCCcEEEEE
Confidence 57899999999985 444555566665555554322 45778864 455999999994 4789999999
Q ss_pred EecCCCC
Q 040739 405 WGGTANR 411 (594)
Q Consensus 405 fGGs~~~ 411 (594)
.+++.+.
T Consensus 176 sl~~~~~ 182 (229)
T 1lvm_A 176 SASNFTN 182 (229)
T ss_dssp EEEETTS
T ss_pred cccccCC
Confidence 9998653
No 107
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=91.54 E-value=1.8 Score=43.68 Aligned_cols=41 Identities=22% Similarity=0.348 Sum_probs=23.9
Q ss_pred EEEECCCCCCCCCCCCccceEEeeccCCC-CCceEEEEEecC
Q 040739 368 FLVVGENQQTFDLEGDSGSLILMKGENGE-KPRPIGIIWGGT 408 (594)
Q Consensus 368 qIVt~~~g~~FS~~GDSGSlVl~~~~~d~-~~~aVGLlfGGs 408 (594)
++-+....+.-+-.||||+.++.....+. .-.++||+.-|.
T Consensus 261 ~~Cag~~~~~~~C~GDSGGPL~~~~~~~~~~~~l~GIvS~g~ 302 (333)
T 1elv_A 261 MICAGGEKGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGP 302 (333)
T ss_dssp EEEEECSTTCBCCTTCTTCEEEEECSSCTTCEEEEEEEEECS
T ss_pred eECccCCCCCCcCcCcCCCceEEEECCCCcEEEEEEEEeeCC
Confidence 44443222234567999999985321111 235899996664
No 108
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2
Probab=91.48 E-value=0.65 Score=44.70 Aligned_cols=40 Identities=20% Similarity=0.232 Sum_probs=24.8
Q ss_pred EEEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 367 DFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 367 dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
+++-+...+..-+-.||||++++.. .+..-.++|++.-|.
T Consensus 183 ~~~Ca~~~~~~~~C~GDSGgPL~~~--~~~~~~l~GI~S~g~ 222 (251)
T 1pyt_D 183 TMVCAGGDGVISACNGDSGGPLNCQ--ADGQWDVRGIVSFGS 222 (251)
T ss_dssp TEEEECCSCSSCCCCSCTTCEEEEE--SSSSEEEEEEEEECC
T ss_pred CeEEecCCCCCccCCCCCCCceEEE--ECCCEEEEEEEEECC
Confidence 3555543333345679999999852 122236899997654
No 109
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...
Probab=91.47 E-value=1.3 Score=42.08 Aligned_cols=39 Identities=23% Similarity=0.261 Sum_probs=23.7
Q ss_pred EEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 368 FLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 368 qIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
++-+.. .+..-.-.||||++++.. .+....++|++.-|.
T Consensus 168 ~~Ca~~~~~~~~~C~GDsGgPl~~~--~~~~~~l~GI~S~g~ 207 (241)
T 2jkh_A 168 MFCAGYDTKQEDACQGDSGGPHVTR--FKDTYFVTGIVSWGE 207 (241)
T ss_dssp EEEESCSSSSCBCCTTTTTCEEEEE--ETTEEEEEEEEEECS
T ss_pred eEEeeCCCCCCccCcCcCCCeeEEE--ECCEEEEEEEEEECC
Confidence 454442 222345679999999842 112236899997665
No 110
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=91.38 E-value=0.9 Score=47.00 Aligned_cols=41 Identities=24% Similarity=0.277 Sum_probs=25.1
Q ss_pred EEEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEec
Q 040739 367 DFLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGG 407 (594)
Q Consensus 367 dqIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGG 407 (594)
+++-+.. .++.-+-.||||+.++.....+..-.++||+.-|
T Consensus 332 ~~~Cag~~~~~~~~C~GDSGGPL~~~~~~~~~~~l~GIvS~g 373 (403)
T 1zjk_A 332 NMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWG 373 (403)
T ss_dssp TEEEECCSSCCTTSCSCSTTCEEEEEETTTTEEEEEEEEEEE
T ss_pred CeEeeccCCCCCCCCcCCCCccEEEEECCCCcEEEEEEEEEC
Confidence 4555543 2234566899999998532222233689999655
No 111
>1kxf_A Sindbis virus capsid protein; chymotrypsin-like serine proteinase, wild type, viral protein; 2.38A {Sindbis virus} SCOP: b.47.1.3 PDB: 1ld4_A 3j0f_A
Probab=91.18 E-value=0.23 Score=49.71 Aligned_cols=29 Identities=31% Similarity=0.534 Sum_probs=26.6
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCCCC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANR 411 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~ 411 (594)
...+||||-.|| |+++++|+|+.||.+..
T Consensus 209 ~G~~GDSGRpI~-----DN~GrVVaIVLGGaneG 237 (264)
T 1kxf_A 209 VGGRGDSGRPIM-----DNSGRVVAIVLGGADEG 237 (264)
T ss_dssp SCCTTCTTCEEE-----CTTSCEEEEEEEEEEET
T ss_pred CCCCCCCCCccc-----cCCCcEEEEEecCCCcC
Confidence 688999999999 99999999999998654
No 112
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Probab=90.48 E-value=0.66 Score=44.10 Aligned_cols=37 Identities=22% Similarity=0.257 Sum_probs=24.0
Q ss_pred EEEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEe
Q 040739 367 DFLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWG 406 (594)
Q Consensus 367 dqIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfG 406 (594)
+++-+.. .+..-+-.||||++++.. +....++|++..
T Consensus 173 ~~~Ca~~~~~~~~~C~GDSGgPL~~~---~~~~~l~Gi~S~ 210 (241)
T 1m9u_A 173 NHICVQDPAGNTGACNGDSGGPLNCP---DGGTRVVGVTSW 210 (241)
T ss_dssp TEEEECCTTSCCBCCTTCTTCEEEEE---SSSEEEEEEEEE
T ss_pred CcEEECcCCCCCeeecCcCCccEEEe---CCCEEEEEEEEE
Confidence 3555543 233345679999999853 233479999976
No 113
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Probab=90.34 E-value=0.89 Score=43.37 Aligned_cols=29 Identities=31% Similarity=0.367 Sum_probs=19.6
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
-+-.||||+.++.. .+..-.++|++.-|.
T Consensus 197 ~~C~GDsGgPL~~~--~~~~~~l~Gi~S~g~ 225 (252)
T 1rtf_B 197 DACQGDSGGPLVCL--NDGRMTLVGIISWGL 225 (252)
T ss_dssp BCCTTCTTCEEEEE--ETTEEEEEEEEEECS
T ss_pred ccccCCCcCceEEE--eCCcEEEEEEEEEcC
Confidence 35569999999852 122236899997654
No 114
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=90.24 E-value=1.9 Score=44.26 Aligned_cols=41 Identities=22% Similarity=0.361 Sum_probs=24.0
Q ss_pred EEEECCC-CCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 368 FLVVGEN-QQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 368 qIVt~~~-g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
++-+... +..-+-.||||++++.....+..-.++|++.-|.
T Consensus 331 ~~Cag~~~~~~d~C~GDSGGPl~~~~~~~~~~~l~GivS~g~ 372 (399)
T 1gpz_A 331 MFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGI 372 (399)
T ss_dssp EEEEECGGGGGGGGCSCSSCEEEEEETTTTEEEEEEEECCCT
T ss_pred eEecccCCCCCccCCCCCchHeEEEECCCCeEEEEEEEEeCC
Confidence 5544432 2234567999999985322222235899996554
No 115
>4agk_A Capsid protein, coat protein, C; hydrolase, viral protein; 1.81A {Aura virus} PDB: 4agj_A 1kxa_A 2snw_A 1svp_A 1kxb_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=89.75 E-value=0.39 Score=44.33 Aligned_cols=29 Identities=31% Similarity=0.487 Sum_probs=26.3
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCCCC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANR 411 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~ 411 (594)
-..+||||.+++ |+++++|+|+.||....
T Consensus 103 ~g~~GdSGrPi~-----Dn~GrVVaIVlGG~neG 131 (158)
T 4agk_A 103 AGGPGDSGRPIL-----DNSGKVVAIVLGGANEG 131 (158)
T ss_dssp SSCTTCTTCEEE-----CTTSCEEEEEEEEEECS
T ss_pred cCCCCCCCCccc-----cCCCCEEEEEecCCCcC
Confidence 588999999999 99999999999998654
No 116
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Probab=89.69 E-value=0.72 Score=53.05 Aligned_cols=40 Identities=25% Similarity=0.213 Sum_probs=24.3
Q ss_pred EEEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 367 DFLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 367 dqIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
+++-++. .++.-+-.||||+.++.. .+....++||+.-|.
T Consensus 723 ~~iCAg~~~gg~daC~GDSGGPLv~~--~~~~~~LvGIvS~G~ 763 (791)
T 4dur_A 723 TELCAGHLAGGTDSCQGDSGGPLVCF--EKDKYILQGVTSWGL 763 (791)
T ss_dssp TEEEESCSSSCCCBCCSCTTCEEEEE--ETTEEEEEEECCTTT
T ss_pred CeEEeccCCCCCCCCCCCcccceEEE--eCCeEEEEEEEEeCC
Confidence 3555443 223345679999999852 122345899997654
No 117
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Probab=89.65 E-value=2.3 Score=40.18 Aligned_cols=40 Identities=23% Similarity=0.221 Sum_probs=24.4
Q ss_pred EEEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 367 DFLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 367 dqIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
+++-+.. .+..-+-.||||++++.. .+....++|++.-|.
T Consensus 167 ~~~Ca~~~~~~~~~C~GDsGgPl~~~--~~~~~~l~GI~S~g~ 207 (235)
T 2wph_S 167 NMFCAGFHEGGRDSCQGDSGGPHVTE--VEGTSFLTGIISWGE 207 (235)
T ss_dssp TEEEESCTTCSCBCCTTCTTCEEEEE--ETTEEEEEEEEEECS
T ss_pred CEEEeCCCCCCCccCCCCCCCceEEe--ECCeEEEEEEEEECC
Confidence 3555542 223345679999999842 122235899997665
No 118
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...
Probab=89.32 E-value=1.1 Score=43.01 Aligned_cols=39 Identities=21% Similarity=0.171 Sum_probs=24.0
Q ss_pred EEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 368 FLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 368 qIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
++-+.. .+..-+-.||||+.++.. .+..-.++|++.-|.
T Consensus 175 ~~Ca~~~~~~~~~C~GDSGgPl~~~--~~g~~~l~GI~S~g~ 214 (254)
T 2bz6_H 175 MFCAGYSDGSKDSCKGDSGGPHATH--YRGTWYLTGIVSWGQ 214 (254)
T ss_dssp EEEESCSSSSCBCCGGGTTCEEEEE--ETTEEEEEEEEEECS
T ss_pred EEeecCCCCCCccccccCCCceEEe--ECCEEEEEEEEEECC
Confidence 555543 223345679999999842 112235899997665
No 119
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=88.72 E-value=0.22 Score=49.10 Aligned_cols=28 Identities=32% Similarity=0.503 Sum_probs=22.3
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCCC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTAN 410 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~ 410 (594)
|+.+|||||+|+ |.++++||++-+.+..
T Consensus 121 ~T~pGdSGsPVv-----n~dG~VIGVHt~s~~~ 148 (213)
T 3fan_A 121 FTACGDSGSPVI-----TEAGELVGVHTGSNKQ 148 (213)
T ss_dssp SSCCCSTTCEEE-----ETTSCEEEEEEC----
T ss_pred ecCCCCCCCccC-----CCCCcEEEEEeccCCc
Confidence 567899999999 8999999999997753
No 120
>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Probab=88.20 E-value=3.6 Score=42.41 Aligned_cols=42 Identities=24% Similarity=0.279 Sum_probs=25.0
Q ss_pred EEEEECC-CCCCCCCCCCccceEEeeccCC--CCCceEEEEEecC
Q 040739 367 DFLVVGE-NQQTFDLEGDSGSLILMKGENG--EKPRPIGIIWGGT 408 (594)
Q Consensus 367 dqIVt~~-~g~~FS~~GDSGSlVl~~~~~d--~~~~aVGLlfGGs 408 (594)
+++-+.. .++.-+-.||||++++...... ..-.++|++.-|.
T Consensus 290 ~~iCag~~~~~~d~C~GDSGGPLv~~~~~~~~~~~~lvGIvS~G~ 334 (372)
T 1z8g_A 290 KMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGT 334 (372)
T ss_dssp TEEEESCTTCSCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBS
T ss_pred CeEeeecCCCCCcCCCCCCccceEeccCcCCCCCEEEEEEEEeCC
Confidence 3555543 2233456799999999532111 1226899996654
No 121
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B
Probab=83.64 E-value=3.5 Score=36.85 Aligned_cols=34 Identities=26% Similarity=0.213 Sum_probs=22.8
Q ss_pred EEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEec
Q 040739 368 FLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGG 407 (594)
Q Consensus 368 qIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGG 407 (594)
++-+.. .+..-+-.||||++++. +++++|++.-|
T Consensus 87 ~iCa~~~~~~~~~C~GDsGgPL~~------~g~l~Gi~S~g 121 (152)
T 2pka_B 87 MLCAGYLPGGKDTCMGDSGGPLIC------NGMWQGITSWG 121 (152)
T ss_dssp EEEEECTTSSCBCCTTCTTCEEEE------TTEEEEEECCC
T ss_pred EEeeccCCCCCcccCCccccceEE------CCEEEEEEecC
Confidence 454442 22334567999999993 25799999666
No 122
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}
Probab=82.80 E-value=3.3 Score=43.36 Aligned_cols=42 Identities=24% Similarity=0.347 Sum_probs=24.5
Q ss_pred EEEEECCCCCCCCCCCCccceEEeeccC-CCCCceEEEEEecC
Q 040739 367 DFLVVGENQQTFDLEGDSGSLILMKGEN-GEKPRPIGIIWGGT 408 (594)
Q Consensus 367 dqIVt~~~g~~FS~~GDSGSlVl~~~~~-d~~~~aVGLlfGGs 408 (594)
.++-+....+.-+-.||||++++..... +..-.++||+.-|.
T Consensus 315 ~~iCAg~~~g~d~C~GDSGGPLv~~~~~~~~~~~lvGIvS~G~ 357 (394)
T 2b9l_A 315 TFVCAGGEQGKDTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGI 357 (394)
T ss_dssp TEEEECCBSSCSCCSSCTTCEEEEEETTEEEEEEEEEEESCTT
T ss_pred CEEEeeCCCCCcCCCCCcchhhEEEEcCCCCeEEEEEEEEECC
Confidence 3555543333346679999999852110 11225899996554
No 123
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=82.68 E-value=4.5 Score=44.34 Aligned_cols=30 Identities=20% Similarity=0.244 Sum_probs=14.2
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
-+-.||||++++.... +..-.++||+.-|.
T Consensus 501 d~C~GDSGGPLv~~~~-~~~~~lvGIvS~G~ 530 (565)
T 2xrc_A 501 DACKGDSGGPLVCMDA-NNVTYVWGVVSWGE 530 (565)
T ss_dssp ------CCCEEEEECT-TCCEEEEEEECC--
T ss_pred ccCCCccccceEEEeC-CCcEEEEEEEeeCC
Confidence 3557999999985311 12235889996554
No 124
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}
Probab=81.97 E-value=6.6 Score=41.32 Aligned_cols=45 Identities=29% Similarity=0.350 Sum_probs=24.6
Q ss_pred EEEEECCCCCCCCCCCCccceEEee----ccCCCCCceEEEEEecCCCC
Q 040739 367 DFLVVGENQQTFDLEGDSGSLILMK----GENGEKPRPIGIIWGGTANR 411 (594)
Q Consensus 367 dqIVt~~~g~~FS~~GDSGSlVl~~----~~~d~~~~aVGLlfGGs~~~ 411 (594)
+++-+....+.-+-.||||++++.. ...+.....+|++.-|...+
T Consensus 301 ~~iCAg~~~g~d~C~GDSGGPL~~~~~~~~~~~~~~~l~GIvS~G~~~C 349 (408)
T 2xxl_A 301 SQLCVGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTC 349 (408)
T ss_dssp TEEEECCSCSSSGGGSCTTCEEEEEECCTTCSSCEEEEEEEEEECCCCT
T ss_pred ceEeecCCCCCccCCCcccChhhcCccceEEECCEEEEEEEEEECCCCC
Confidence 3555543223345679999999411 01122336899996664334
No 125
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=74.51 E-value=1.9 Score=47.97 Aligned_cols=29 Identities=31% Similarity=0.291 Sum_probs=18.0
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
-+-.||||++++.. .+..-.++||+.-|.
T Consensus 569 d~C~GDSGGPLv~~--~~~~~~lvGIvS~G~ 597 (625)
T 2f83_A 569 DACKGDSGGPLSCK--HNEVWHLVGITSWGE 597 (625)
T ss_dssp ---CCCTTCEEEEE--ETTEEEEEEEEEECC
T ss_pred cCCCCCcccceEEE--ECCeEEEEEEEEeCC
Confidence 35579999999852 112236899996654
No 126
>4dcd_A Protease 3C, genome polyprotein; antiviral inhibitors, dipeptidyl inhib hydrolase-hydrolase inhibitor complex; HET: K36; 1.69A {Human poliovirus 1} PDB: 1l1n_A
Probab=69.18 E-value=48 Score=32.05 Aligned_cols=36 Identities=22% Similarity=0.286 Sum_probs=27.4
Q ss_pred EEEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecCCC
Q 040739 365 LTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTAN 410 (594)
Q Consensus 365 f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~ 410 (594)
+...+.-.. -+.+|.=||+++ ..++++||+.||++.
T Consensus 139 t~r~l~Y~~----pT~~G~CGg~l~------~~gkIlGIHvaG~G~ 174 (190)
T 4dcd_A 139 TARTLMYNF----PTRAGQCGGVIT------CTGKVIGMHVGGNGS 174 (190)
T ss_dssp EEEEEEESS----CCCTTCTTCEEE------ETTEEEEEEEEECSS
T ss_pred ccceEEEcc----CCCCCccCCEEE------eCCCEEEEEECCCCC
Confidence 344555455 488999999999 456899999999753
No 127
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=68.41 E-value=7.8 Score=36.04 Aligned_cols=38 Identities=32% Similarity=0.347 Sum_probs=30.2
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL 435 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL 435 (594)
+++|||=|+++. -+.-+|||+.+|... ..-|.+|...+
T Consensus 100 ~~epGDCGG~L~------C~HGviGivTaGG~g--------------~VaF~D~R~l~ 137 (142)
T 2hrv_A 100 PCEPGDCGGKLL------CKHGVIGIVTAGGDN--------------HVAFIDLRHFH 137 (142)
T ss_dssp CCCTTCTTCEEE------ETTEEEEEEEEECSS--------------EEEEEEGGGGS
T ss_pred CCCCCCCCceee------eCCCceEEEecCCCC--------------EEEEEEchhhh
Confidence 899999999998 466799999988743 35577777654
No 128
>1cqq_A Type 2 rhinovirus 3C protease; viral protein, hydrolase; HET: AG7; 1.85A {Human rhinovirus 2} SCOP: b.47.1.4 PDB: 2xya_A*
Probab=66.31 E-value=3.8 Score=39.11 Aligned_cols=26 Identities=23% Similarity=0.350 Sum_probs=22.1
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTA 409 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~ 409 (594)
-+..|+=||+++. .+.++|||.||++
T Consensus 141 pT~~G~CGsvl~~------~gkIiGIHvAG~G 166 (180)
T 1cqq_A 141 PTKSGYCGGVLYK------IGQVLGIHVGGNG 166 (180)
T ss_dssp CCCTTCTTCEEEE------TTEEEEEEEEECS
T ss_pred CCCCCcCCCeEEE------CCCEEEEEECCCC
Confidence 4889999999993 3599999999964
No 129
>2hal_A Hepatitis A protease 3C; 3C protease, inhibitor design; HET: BBL; 1.35A {Hepatitis a virus} SCOP: b.47.1.4 PDB: 2h6m_A* 2h9h_A* 2cxv_A* 2a4o_A* 1hav_A 1qa7_A*
Probab=62.59 E-value=4.1 Score=39.66 Aligned_cols=31 Identities=19% Similarity=0.254 Sum_probs=23.8
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTA 409 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~ 409 (594)
-+.+||=||+++.. .....+.++|||.||++
T Consensus 166 pT~~G~CGs~li~~-~~~~~~kIiGiHvaG~g 196 (212)
T 2hal_A 166 EGLPGMCGGALVSS-NQSIQNAILGIHVAGGN 196 (212)
T ss_dssp CCCTTCTTCEEEES-CGGGTTCEEEEEEEEET
T ss_pred CCCCCcCCCeEEEc-cCCCCceEEEEEeCcCC
Confidence 38899999999941 01127899999999974
No 130
>1z8r_A Coxsackievirus B4 polyprotein; beta barrel coordinated zinc ION, hydrolase; NMR {Human coxsackievirus B4}
Probab=61.90 E-value=7.8 Score=36.84 Aligned_cols=38 Identities=26% Similarity=0.375 Sum_probs=29.7
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL 435 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL 435 (594)
+++|||=|+++. -+--+|||+.+|... ..-|.+|...+
T Consensus 120 ~~epGDCGG~L~------C~HGviGivTaGG~g--------------~VaF~DiR~l~ 157 (166)
T 1z8r_A 120 FSEPGDAGGILR------CEHGVIGLVTMGGEG--------------VVGFADVRDLL 157 (166)
T ss_dssp SSSCCCCBSEEE------CSSSEEEEEEEECSS--------------EEEEEESTTCC
T ss_pred CCCCCCCCceee------eCCCceEEEecCCCC--------------EEEEEEcchhh
Confidence 899999999998 566799999988742 35566776654
No 131
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}
Probab=59.03 E-value=22 Score=34.33 Aligned_cols=41 Identities=22% Similarity=0.252 Sum_probs=24.4
Q ss_pred EEEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 367 DFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 367 dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
+++-+....+.-+-.||||++++... .+....++|++.-|.
T Consensus 211 ~~~Ca~~~~~~~~C~GDSGGPL~~~~-~~~~~~l~GIvS~g~ 251 (278)
T 2olg_A 211 SQLCAGGEKAKDSCGGDSGGPLLAER-ANQQFFLEGLVSFGA 251 (278)
T ss_dssp TEEEECCTTCTTCCCCCTTCEEEEEE-GGGEEEEEEEEEECC
T ss_pred ceEeeecCCCCeeCCCccCcceEEEc-CCCcEEEEEEEEECC
Confidence 35555432233456799999998521 112236899996553
No 132
>3zve_A 3C protease; hydrolase, michael inhibitor; HET: G84; 1.80A {Human enterovirus} PDB: 3zv8_A* 3zva_A* 3zvb_A* 3zv9_A* 3zvd_A* 3zvc_A* 3zvf_A* 3zvg_A*
Probab=55.99 E-value=49 Score=31.75 Aligned_cols=36 Identities=22% Similarity=0.328 Sum_probs=27.1
Q ss_pred EEEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecCCC
Q 040739 365 LTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTAN 410 (594)
Q Consensus 365 f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~ 410 (594)
+...+.-.. -+.+|+=||+++ ..++++||+.||++.
T Consensus 132 ~~~~~~Y~~----pT~~G~CG~~li------~~gkI~GiHvaG~G~ 167 (190)
T 3zve_A 132 THRILMYNF----PTRAGQCGGVVT------TTGKVIGIHVGGNGA 167 (190)
T ss_dssp EEEEEEESS----CCCTTCTTCEEE------ETTEEEEEEEEECSS
T ss_pred eeeeEEEec----CCCCCccCCeEE------ECCCEEEEEECcCCC
Confidence 444555444 488899999998 457899999999743
No 133
>2bhg_A Foot-and-mouth disease virus 3C protease; chymotrypsin-like cysteine protease, capsid protein, core protein; 1.9A {Foot-and-mouth disease virus} SCOP: b.47.1.4 PDB: 2j92_A 2wv4_A 2wv5_A
Probab=50.81 E-value=7.3 Score=37.82 Aligned_cols=30 Identities=20% Similarity=0.298 Sum_probs=23.8
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTA 409 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~ 409 (594)
-+.+||=||+++. .....+.+||||.||++
T Consensus 158 pT~~G~CGs~lv~--~~~~~~kIvGIHvaG~g 187 (209)
T 2bhg_A 158 ATRAGYAGGAVLA--KDGADTFIVGTHSAGGN 187 (209)
T ss_dssp CCCTTCTTCEEEE--EETTEEEEEEEEEEEET
T ss_pred CCCCCcCCCEEEE--ecCCCceEEEEEEccCC
Confidence 3789999999973 12357899999999974
No 134
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Probab=50.49 E-value=9.9 Score=35.28 Aligned_cols=26 Identities=27% Similarity=0.466 Sum_probs=20.1
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
-.-.||||++++ ..++.++|++..|.
T Consensus 165 ~~C~GDSGgPl~-----~~~g~lvGi~S~g~ 190 (215)
T 1p3c_A 165 DTFSGNSGSAML-----DQNQQIVGVHNAGY 190 (215)
T ss_dssp CCCTTCTTCEEE-----CTTSCEEEECCEEE
T ss_pred ccCCCCCCCeeE-----ccCCeEEEEEeccc
Confidence 356799999999 44669999985543
No 135
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Probab=49.86 E-value=20 Score=30.97 Aligned_cols=18 Identities=22% Similarity=0.458 Sum_probs=14.0
Q ss_pred EEEEEeCCCCceeEEEecCceecc
Q 040739 224 GAIVKSQTGSRQVGFLTNRHVAVD 247 (594)
Q Consensus 224 GclVtD~~G~~~~yiLTNnHVla~ 247 (594)
|.|+.++ ++||++||...
T Consensus 29 GsLIs~~------~VLTAAHC~~~ 46 (131)
T 1yph_C 29 GSLINEN------WVVTAAHCGVT 46 (131)
T ss_dssp EEEEETT------EEEECGGGCCC
T ss_pred EEEeeCC------EEEECHHHCCC
Confidence 5666654 89999999865
No 136
>3qzr_A 3C protein; chymotrypsin-fold, beta-ribbon, hydrolysis, nucleus, hydrola hydrolase inhibitor complex; HET: AG7; 1.04A {Human enterovirus 71} SCOP: b.47.1.0 PDB: 3osy_A 3qzq_A* 3r0f_A* 3sjo_A* 3sjk_A 3sji_A* 3sj8_A* 3sj9_A
Probab=49.04 E-value=64 Score=31.06 Aligned_cols=35 Identities=20% Similarity=0.301 Sum_probs=27.6
Q ss_pred EEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecCCC
Q 040739 366 TDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTAN 410 (594)
Q Consensus 366 ~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~ 410 (594)
...+.-.. -+..|.=||+++ ..+.++||+.||++.
T Consensus 137 ~r~l~Y~~----pTk~G~CGgvl~------~~gkIiGIHvaGnG~ 171 (187)
T 3qzr_A 137 HRTMMYNF----PTKAGQCGGVVT------SVGKIIGIHIGGNGR 171 (187)
T ss_dssp EEEEEESS----CCCTTCTTCEEE------ETTEEEEEEEEECSS
T ss_pred ccEEEECC----CCCCCccCCeEE------ecCcEEEEEECCCCC
Confidence 45555555 489999999999 368999999999753
No 137
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Probab=46.38 E-value=25 Score=33.04 Aligned_cols=31 Identities=32% Similarity=0.378 Sum_probs=21.4
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
-.-.||||++++...+.+..-.++|++.-|.
T Consensus 199 ~~C~GDsGgPL~~~~~~~~~~~l~GI~S~g~ 229 (259)
T 3rm2_H 199 DACEGDSGGPFVMKSPFNNRWYQMGIVSWGE 229 (259)
T ss_dssp BCCTTCTTCEEEEECTTTCCEEEEEEEEECS
T ss_pred cccCCCCCCeeEEEECCCCCEEEEEEEEECC
Confidence 3567999999985422233347899997664
No 138
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...
Probab=45.89 E-value=21 Score=29.56 Aligned_cols=47 Identities=19% Similarity=0.163 Sum_probs=28.0
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL 435 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL 435 (594)
-+-.||||++++... +..-.++|++.-|...+ .+..-++|+.+...+
T Consensus 41 ~~C~GDSGGPL~~~~--~~~~~l~GIvS~g~~c~---------~~~~p~vyt~V~~y~ 87 (97)
T 1yph_E 41 SSCMGDSGGPLVCKK--NGAWTLVGIVSWGSSTC---------STSTPGVYARVTALV 87 (97)
T ss_dssp BCCTTCTTCEEEEEE--TTEEEEEEEEEECCTTC---------CTTSEEEEEEHHHHH
T ss_pred CCCcCCCCCcEEEEe--CCeEEEEEEEEeCCCCC---------CCCCCeEEEEHHHhH
Confidence 355699999998521 22236899986554322 112346777766554
No 139
>2ijd_1 Picornain 3C, RNA-directed RNA polymerase; RNA-dependent RNA polymerase, picornavirus, protease, hydrolase, transferase; 3.40A {Human poliovirus 1} SCOP: b.47.1.4 e.8.1.4
Probab=45.64 E-value=25 Score=39.46 Aligned_cols=34 Identities=24% Similarity=0.316 Sum_probs=26.2
Q ss_pred EEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739 366 TDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTA 409 (594)
Q Consensus 366 ~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~ 409 (594)
...+.-.. -+.+||=||+++ ..+++||||.||++
T Consensus 133 ~~~~~y~~----~T~~G~CG~~l~------~~gkIvGiHvaG~g 166 (644)
T 2ijd_1 133 ARTLMYNF----PTRAGQAGGVIT------CTGKVIGMHVGGNG 166 (644)
T ss_dssp EEEEEECS----CCCTTCTTCEEE------ETTEEEEEEEEECS
T ss_pred ccEEEEcC----CCCCCCCCchhh------hCCcEEEEEEcCCC
Confidence 44555555 478999999988 35789999999964
No 140
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Probab=42.52 E-value=39 Score=33.61 Aligned_cols=51 Identities=18% Similarity=0.098 Sum_probs=33.0
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHHhhcC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLNLLE 439 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~L~ 439 (594)
-+..||||++++ ..+.+++||+.-|...|++- .+..-.+|..+...+...+
T Consensus 188 dtC~gdsGgPl~-----~~~~~~~Gi~s~g~~~C~~~------~~~~p~vyt~v~~~~~~~~ 238 (268)
T 1arb_A 188 VTEPGSSGSPIY-----SPEKRVLGQLHGGPSSCSAT------GTNRSDQYGRVFTSWTGGG 238 (268)
T ss_dssp CCCTTCTTCEEE-----CTTSCEEEEEEECSCCTTCC------GGGSEEEEEEHHHHHHTTS
T ss_pred CCccCcccCCcE-----eeCCEEEEEEeecCcccCCC------CCCCCceEEEeeeeeccCC
Confidence 367899999999 44678999997665334211 0012367777777776543
No 141
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2
Probab=41.36 E-value=61 Score=30.25 Aligned_cols=42 Identities=21% Similarity=0.370 Sum_probs=25.4
Q ss_pred EEEEECCC-CCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 367 DFLVVGEN-QQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 367 dqIVt~~~-g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
+++-+... +..-+-.||||++++.....+..-.++|++.-|.
T Consensus 173 ~~~Ca~~~~~~~~~C~GDSGgPl~~~~~~~~~~~l~Gi~S~g~ 215 (242)
T 2qy0_B 173 NMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGI 215 (242)
T ss_dssp TEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECS
T ss_pred CEEeccCCCCCCccccCCCCCcEEEEECCCCeEEEEEEEEECC
Confidence 35555432 2334667999999985311222236899997665
No 142
>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...
Probab=34.38 E-value=45 Score=32.50 Aligned_cols=31 Identities=32% Similarity=0.378 Sum_probs=20.6
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
-+-.||||++++.....+..-.++|++.-|.
T Consensus 229 ~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~ 259 (289)
T 2bdy_A 229 DACEGDSGGPFVMKSPFNNRWYQMGIVSWGE 259 (289)
T ss_dssp BCCTTCTTCEEEEECTTTCCEEEEEEEEECS
T ss_pred ccCCCCCccceEEEECCCCCEEEEEEEEECC
Confidence 4567999999985422222336899996554
No 143
>3e90_B NS3 protease; trypsin-like serine protease, protease inhibitor, catalytic histidine, induced FIT, ATP-binding, capsid protein, helicase; HET: NKK; 2.45A {West nile virus} SCOP: b.47.1.3
Probab=32.75 E-value=21 Score=34.78 Aligned_cols=19 Identities=37% Similarity=0.564 Sum_probs=17.6
Q ss_pred CCCccceEEeeccCCCCCceEEEE
Q 040739 381 EGDSGSLILMKGENGEKPRPIGII 404 (594)
Q Consensus 381 ~GDSGSlVl~~~~~d~~~~aVGLl 404 (594)
.|-|||+|+ |.++++|||+
T Consensus 136 ~GTSGSPIi-----n~~G~VVGLY 154 (198)
T 3e90_B 136 TGTSGSPIV-----DKNGDVIGLY 154 (198)
T ss_dssp TTCTTCEEE-----CTTCCEEEEC
T ss_pred CCCCCCcee-----cCCCcEEEEe
Confidence 489999999 8999999997
No 144
>2ggv_B NS3, non-structural protein 3; beta barrel, serine protease, viral protease, flavivirus, hydrolase; 1.80A {West nile virus} PDB: 2ijo_B
Probab=32.51 E-value=19 Score=34.73 Aligned_cols=20 Identities=35% Similarity=0.469 Sum_probs=17.9
Q ss_pred CCCccceEEeeccCCCCCceEEEEE
Q 040739 381 EGDSGSLILMKGENGEKPRPIGIIW 405 (594)
Q Consensus 381 ~GDSGSlVl~~~~~d~~~~aVGLlf 405 (594)
.|-|||+|+ |.++++|||+=
T Consensus 131 ~GTSGSPIi-----n~~G~vvGLYG 150 (185)
T 2ggv_B 131 TGTSGSPIV-----DKNGDVIGLYG 150 (185)
T ss_dssp GGGTTCEEE-----CTTSCEEEEEE
T ss_pred CCCCCCceE-----cCCCcEEEEec
Confidence 489999999 89999999973
No 145
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=31.92 E-value=50 Score=33.76 Aligned_cols=58 Identities=17% Similarity=0.175 Sum_probs=32.9
Q ss_pred EEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739 368 FLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL 435 (594)
Q Consensus 368 qIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL 435 (594)
++-++. .++.-+-.||||++++.....+..-.++|++.-|.. +| ....++|+.+...+
T Consensus 279 ~iCAG~~~~~~d~C~GDSGGPLv~~~~~~~~~~lvGIvS~G~~-C~---------~~~pgVYTrVs~y~ 337 (347)
T 4f4o_C 279 TFCAGLSKYQEDTCYGDAGSAFAVHDKDDDTWYAAGILSFDKS-CR---------TAEYGVYVRVTSIL 337 (347)
T ss_dssp EEEECCCTTCCCCCTTCTTCEEEEEETTTTEEEEEEEEEECCC-TT---------TSSCEEEEEHHHHH
T ss_pred eEEecCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEEEeCCC-CC---------CCCCeEEEEHHHHH
Confidence 555443 223335579999998753222333358999955542 31 12347777776655
No 146
>3u1j_B Serine protease NS3; serine protease, ER MEM hydrolase-hydrolase inhibitor complex; 1.80A {Dengue virus 3} SCOP: b.47.1.3 PDB: 3u1i_B
Probab=30.33 E-value=23 Score=34.24 Aligned_cols=19 Identities=32% Similarity=0.609 Sum_probs=17.6
Q ss_pred CCCccceEEeeccCCCCCceEEEE
Q 040739 381 EGDSGSLILMKGENGEKPRPIGII 404 (594)
Q Consensus 381 ~GDSGSlVl~~~~~d~~~~aVGLl 404 (594)
.|=|||+|+ |.++++|||+
T Consensus 141 ~GTSGSPIi-----n~~G~VVGLY 159 (191)
T 3u1j_B 141 PGTSGSPII-----NREGKVVGLY 159 (191)
T ss_dssp TTCTTCEEE-----CTTSCEEEEC
T ss_pred CCCCCCcee-----cCCCcEEEEe
Confidence 489999999 8999999997
No 147
>2fp7_B Serine protease NS3; flavivirus, NS3 protease, NS2B cofactor; HET: OAR; 1.68A {West nile virus} SCOP: b.47.1.3
Probab=29.66 E-value=17 Score=34.67 Aligned_cols=19 Identities=37% Similarity=0.564 Sum_probs=17.4
Q ss_pred CCCccceEEeeccCCCCCceEEEE
Q 040739 381 EGDSGSLILMKGENGEKPRPIGII 404 (594)
Q Consensus 381 ~GDSGSlVl~~~~~d~~~~aVGLl 404 (594)
.|-|||+|+ |.++++|||+
T Consensus 117 ~GtSGSPIi-----n~~G~vVGLY 135 (172)
T 2fp7_B 117 TGTSGSPIV-----DKNGDVIGLY 135 (172)
T ss_dssp GGGTTCEEE-----CTTSCEEEES
T ss_pred CCCCCCceE-----ccCCcEEEEe
Confidence 489999999 8999999996
No 148
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}
Probab=29.08 E-value=26 Score=33.21 Aligned_cols=26 Identities=23% Similarity=0.175 Sum_probs=18.4
Q ss_pred CCCccceEEeeccCCCCCceEEEEEecC
Q 040739 381 EGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 381 ~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
.||||++++.. .+..+.++|++.-|.
T Consensus 166 ~GDSGGPlv~~--~~g~~~lvGIvS~G~ 191 (218)
T 3cp7_A 166 GGSSGGPWFLG--NGTGGAQNSTNSYGY 191 (218)
T ss_dssp TTCTTCEEEES--SSSSSCEEEECCEEE
T ss_pred CCCcCCeeEEc--cCCCeEEEEEEcccc
Confidence 59999999942 123468999995443
No 149
>3lkw_A Fusion protein of nonstructural protein 2B and nonstructural protein 3; viral protease, serine protease, NS3 protease, NS2B cofactor; 2.00A {Dengue virus 1} PDB: 3l6p_A
Probab=27.52 E-value=26 Score=34.97 Aligned_cols=19 Identities=26% Similarity=0.559 Sum_probs=17.6
Q ss_pred CCCccceEEeeccCCCCCceEEEE
Q 040739 381 EGDSGSLILMKGENGEKPRPIGII 404 (594)
Q Consensus 381 ~GDSGSlVl~~~~~d~~~~aVGLl 404 (594)
.|=|||+|+ |.++++|||+
T Consensus 182 ~GTSGSPIi-----n~~G~VvGLY 200 (236)
T 3lkw_A 182 PGTAGSPIV-----NREGKIVGLY 200 (236)
T ss_dssp TTCTTCEEE-----CTTSCEEEES
T ss_pred CCCCCCcee-----cCCCcEEEEe
Confidence 489999999 8999999997
No 150
>2fom_B Polyprotein; flavivirus, NS3 protease, NS2B cofactor, viral protein-prote complex; 1.50A {Dengue virus 2} SCOP: b.47.1.3 PDB: 1df9_A 2qid_A 1bef_A
Probab=27.30 E-value=19 Score=34.77 Aligned_cols=19 Identities=37% Similarity=0.635 Sum_probs=17.4
Q ss_pred CCCccceEEeeccCCCCCceEEEE
Q 040739 381 EGDSGSLILMKGENGEKPRPIGII 404 (594)
Q Consensus 381 ~GDSGSlVl~~~~~d~~~~aVGLl 404 (594)
.|=|||+|+ |.++++|||+
T Consensus 132 ~GTSGSPIi-----n~~G~vvGLY 150 (185)
T 2fom_B 132 PGTSGSPIV-----DKKGKVVGLY 150 (185)
T ss_dssp GGGTTCEEE-----CTTSCEEEET
T ss_pred CCCCCCceE-----ccCCcEEEEe
Confidence 489999999 8999999995
No 151
>2b0f_A Picornain 3C (protease 3C) (P3C); beta barrel, hydrolase-hydrolase inhibitor complex; HET: CA1; NMR {Human rhinovirus 14} PDB: 2in2_A
Probab=25.30 E-value=2.1e+02 Score=27.30 Aligned_cols=35 Identities=17% Similarity=0.291 Sum_probs=26.0
Q ss_pred EEEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739 365 LTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTA 409 (594)
Q Consensus 365 f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~ 409 (594)
+...+.-.. -+..|==|++++ ..++++|||+||++
T Consensus 131 t~~~~~Y~~----pTk~G~CGgvl~------~~gkIlGIHvaG~G 165 (182)
T 2b0f_A 131 TNRMIRYDY----ATKTGQCGGVLC------ATGKIFGIHVGGNG 165 (182)
T ss_dssp EEEEEEEES----CCCTTCTTCEEE------ETTEEEEEEEEEET
T ss_pred ecceEEecc----CCCCcccCCeEE------eCCCEEEEEeCCCC
Confidence 344444444 378899999998 35689999999974
No 152
>3q3y_A HEVB EV93 3C protease; cysteine trypsin-like protease, 3C cysteine protease (picorn antiviral compound 1 (AG7404); HET: XNV; 1.32A {Human enterovirus B} SCOP: b.47.1.4 PDB: 3q3x_A* 3ruo_A* 3zyd_A 3zz5_A* 3zz6_A* 3zz7_A* 3zz8_A* 3zz9_A* 3zza_A* 3zzb_A* 2ztx_A 2vb0_A 2zty_A 2ztz_A 2zu3_A* 3zye_A 3zz3_A 2zu1_A 3zz4_A 3zzc_A* ...
Probab=22.17 E-value=2.5e+02 Score=27.19 Aligned_cols=35 Identities=23% Similarity=0.418 Sum_probs=25.8
Q ss_pred EEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecCCC
Q 040739 366 TDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTAN 410 (594)
Q Consensus 366 ~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~ 410 (594)
...+.-.. -+..|==|++++ ..+.++||+.||++.
T Consensus 135 ~r~l~Y~~----pTk~G~CGgvL~------~~gkIiGIHvgGnG~ 169 (191)
T 3q3y_A 135 KRMLVYNF----PTRAGQCGGVLM------STGKVLGIHVGGNGH 169 (191)
T ss_dssp EEEEEEES----CCCTTCTTCEEE------ETTEEEEEEEEEETT
T ss_pred cCEEEecC----CCCCCccCCEEE------eCCCEEEEEECCCCc
Confidence 34444444 377888899988 357999999999753
No 153
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Probab=20.49 E-value=70 Score=33.40 Aligned_cols=31 Identities=32% Similarity=0.378 Sum_probs=20.9
Q ss_pred CCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739 378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGT 408 (594)
Q Consensus 378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs 408 (594)
-+-.||||+.++.....+..-.++||+.-|.
T Consensus 364 d~C~GDSGGPLv~~~~~~~~~~l~GIvS~G~ 394 (424)
T 3nxp_A 364 DACEGDSGGPFVMKSPFNNRWYQMGIVSWGE 394 (424)
T ss_dssp CTTCSCTTCEEEEECTTTCCEEEEEEECCSS
T ss_pred ccCCCcCCCceEEEECCCCcEEEEEEEEeCC
Confidence 4557999999985422233346899996554
Done!