Query         040739
Match_columns 594
No_of_seqs    183 out of 473
Neff          4.5 
Searched_HMMs 13730
Date          Mon Mar 25 18:19:39 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040739.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/040739hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d2qaaa1 b.47.1.1 (A:16-242) Pr  99.8 1.4E-20   1E-24  174.9  15.5  185  201-443     1-185 (185)
  2 d2sgaa_ b.47.1.1 (A:) Protease  99.8 7.4E-20 5.4E-24  169.4  13.0  180  202-443     2-181 (181)
  3 d2h5ca1 b.47.1.1 (A:15A-245) a  99.7 4.5E-17 3.3E-21  150.9  15.7  184  218-445    14-198 (198)
  4 d1hpga_ b.47.1.1 (A:) Glutamic  99.6 2.8E-14   2E-18  127.9  16.0  177  218-443    11-187 (187)
  5 d1l1ja_ b.47.1.1 (A:) Protease  98.6 5.9E-07 4.3E-11   85.2  15.8   95  327-439   126-224 (228)
  6 d2z9ia2 b.47.1.1 (A:6-226) Pro  98.5 2.8E-07   2E-11   86.0  11.0  101  328-438   105-212 (221)
  7 d1lcya2 b.47.1.1 (A:6-210) Mit  98.4 1.3E-07 9.2E-12   87.8   7.1   91  327-439   111-205 (205)
  8 d1agja_ b.47.1.1 (A:) Epidermo  98.4 7.4E-08 5.4E-12   90.8   4.9   86  328-436   149-234 (242)
  9 d2o8la1 b.47.1.1 (A:1-216) V8   98.3 1.7E-06 1.2E-10   79.2  11.3   28  378-410   163-190 (216)
 10 d1ky9a2 b.47.1.1 (A:11-259) Pr  98.3 3.1E-06 2.2E-10   81.7  12.6   90  328-437   147-240 (249)
 11 d2qf3a1 b.47.1.1 (A:43-252) St  98.2 1.4E-06 1.1E-10   80.8   9.4   98  327-438   105-203 (210)
 12 d1lvmb_ b.47.1.3 (B:) TEV prot  98.0 9.3E-06 6.8E-10   77.1  10.3   70  327-410    99-171 (219)
 13 d1qtfa_ b.47.1.1 (A:) Exfoliat  97.9 1.3E-05 9.1E-10   76.3   8.7   28  378-410   180-207 (246)
 14 d2bhga1 b.47.1.4 (A:7-205) 3C   97.9 7.9E-06 5.8E-10   74.7   6.3   86  327-433   101-190 (199)
 15 d1p3ca_ b.47.1.1 (A:) Glutamyl  97.4 0.00011 7.7E-09   66.0   6.5   28  378-410   165-192 (215)
 16 d1arba_ b.47.1.1 (A:) Achromob  96.3  0.0085 6.2E-07   55.8  10.5   30  376-410   186-215 (263)
 17 d1hj8a_ b.47.1.2 (A:) Trypsin(  96.3    0.01 7.5E-07   53.0  10.7  157  220-409    24-195 (222)
 18 g2pka.1 b.47.1.2 (A:,B:) Kalli  96.2   0.021 1.6E-06   51.3  12.3   43  379-435   179-221 (232)
 19 d1nn6a_ b.47.1.2 (A:) Chymase   96.2  0.0076 5.5E-07   54.0   8.9   43  376-435   172-214 (224)
 20 d1gvza_ b.47.1.2 (A:) Prostate  96.1   0.017 1.3E-06   51.5  11.0  106  287-411    93-210 (237)
 21 d1op0a_ b.47.1.2 (A:) Venom se  96.0   0.015 1.1E-06   52.3  10.1   30  376-411   172-201 (234)
 22 d2z7fe1 b.47.1.2 (E:16-243) El  95.7   0.032 2.3E-06   49.1  11.0   23  379-407   168-190 (218)
 23 d1npma_ b.47.1.2 (A:) Neuropsi  95.7   0.032 2.3E-06   49.6  11.0   54  368-435   164-217 (225)
 24 d1j16a_ b.47.1.2 (A:) Trypsin(  95.7   0.044 3.2E-06   48.9  11.8  121  287-435    81-213 (223)
 25 d1q3xa1 b.47.1.2 (A:445-686) M  95.6   0.028   2E-06   50.6  10.2   53  375-435   180-232 (242)
 26 g1fiw.1 b.47.1.2 (L:,A:) Beta-  95.6    0.05 3.6E-06   50.2  12.1   35  375-409   204-238 (274)
 27 d1fuja_ b.47.1.2 (A:) Myelobla  95.6   0.061 4.5E-06   47.3  12.2  121  288-435    89-213 (221)
 28 d1ao5a_ b.47.1.2 (A:) Kallikre  95.6    0.03 2.2E-06   50.2  10.1   46  376-435   181-226 (237)
 29 d1tona_ b.47.1.2 (A:) Tonin {R  95.5   0.055   4E-06   48.2  11.6   44  378-435   181-224 (235)
 30 d1bioa_ b.47.1.2 (A:) Factor D  95.5   0.029 2.1E-06   49.2   9.7   44  378-435   177-220 (228)
 31 d1gdna_ b.47.1.2 (A:) Trypsin(  95.4   0.021 1.6E-06   50.7   8.6   29  376-409   172-200 (224)
 32 d1eufa_ b.47.1.2 (A:) Duodenas  95.3   0.017 1.2E-06   51.5   7.5   43  376-435   174-216 (224)
 33 d1lo6a_ b.47.1.2 (A:) Kallikre  95.3   0.064 4.7E-06   47.6  11.2   52  370-435   162-213 (221)
 34 d1a7sa_ b.47.1.2 (A:) Heparin   95.1   0.076 5.5E-06   47.0  11.2   30  376-411   167-196 (225)
 35 d1sgfa_ b.47.1.2 (A:) 7S NGF p  95.0   0.043 3.2E-06   48.7   9.1   51  371-435   167-217 (228)
 36 d1orfa_ b.47.1.2 (A:) Granzyme  95.0    0.19 1.4E-05   44.4  13.6   27  375-407   175-201 (232)
 37 d1fi8a_ b.47.1.2 (A:) Granzyme  94.9   0.056 4.1E-06   48.0   9.7  104  289-409    88-203 (227)
 38 d2f91a1 b.47.1.2 (A:16-244) Tr  94.9   0.078 5.7E-06   47.4  10.7   31  376-408   181-211 (237)
 39 d2bz6h1 b.47.1.2 (H:16-257) Co  94.7    0.01 7.5E-07   53.4   4.2   33  374-408   182-214 (254)
 40 d1brup_ b.47.1.2 (P:) Elastase  94.6   0.093 6.8E-06   46.4  10.4   40  368-408   172-211 (241)
 41 d2qy0b1 b.47.1.2 (B:447-686) C  94.5   0.086 6.3E-06   47.4  10.0   43  367-409   173-216 (240)
 42 d1eq9a_ b.47.1.2 (A:) (alpha,g  94.4   0.019 1.4E-06   50.7   5.0   34  369-408   163-196 (222)
 43 d1z8ga1 b.47.1.2 (A:163-417) H  94.3    0.16 1.2E-05   45.8  11.5   35  375-409   182-218 (255)
 44 d1xx9a_ b.47.1.2 (A:) Coagulat  94.2   0.065 4.7E-06   47.8   8.3   49  376-435   180-228 (237)
 45 d1rfna_ b.47.1.2 (A:) Coagulat  94.1     0.1 7.5E-06   46.0   9.5   33  375-409   176-208 (235)
 46 d1fq3a_ b.47.1.2 (A:) Granzyme  94.1   0.016 1.2E-06   51.8   3.9   29  375-409   174-202 (227)
 47 d1ekbb_ b.47.1.2 (B:) Enterope  94.0    0.12 8.8E-06   45.8   9.9   29  379-409   182-210 (235)
 48 d1fxya_ b.47.1.2 (A:) Coagulat  93.9    0.14   1E-05   45.4   9.9   30  374-409   171-200 (228)
 49 d1hj9a_ b.47.1.2 (A:) Trypsin(  93.8    0.19 1.4E-05   44.1  10.5   29  375-409   168-196 (223)
 50 d2fpza1 b.47.1.2 (A:16-244) be  93.8   0.065 4.7E-06   48.1   7.5   32  376-409   186-217 (243)
 51 d1mzaa_ b.47.1.2 (A:) Granzyme  93.7    0.35 2.5E-05   42.9  12.4   27  377-409   183-209 (240)
 52 d2hlca_ b.47.1.2 (A:) HL colla  93.5    0.16 1.2E-05   45.1   9.6   37  368-408   164-200 (230)
 53 d1azza_ b.47.1.2 (A:) Crab col  93.4    0.06 4.4E-06   47.9   6.5   25  378-408   172-196 (226)
 54 d1pytd_ b.47.1.2 (D:) (alpha,g  93.4    0.13 9.2E-06   46.4   8.8   57  369-435   185-242 (251)
 55 d1autc_ b.47.1.2 (C:) Activate  93.3    0.18 1.3E-05   44.6   9.7   49  376-435   183-231 (240)
 56 d1m9ua_ b.47.1.2 (A:) Elastase  93.3    0.22 1.6E-05   43.9  10.2   30  376-408   183-212 (241)
 57 d1gvkb_ b.47.1.2 (B:) Elastase  93.3    0.15 1.1E-05   44.9   9.0   36  369-406   173-208 (240)
 58 d1eaxa_ b.47.1.2 (A:) Matripta  93.2    0.43 3.1E-05   42.6  12.2   30  377-409   184-215 (241)
 59 d1si5h_ b.47.1.2 (H:) Hepatocy  93.2    0.45 3.3E-05   42.4  12.3   32  376-409   171-202 (234)
 60 d1t32a1 b.47.1.2 (A:16-244) Ca  93.1    0.12 8.7E-06   45.6   8.1   29  375-409   172-200 (224)
 61 d2p3ub1 b.47.1.2 (B:16-243) Co  93.0   0.043 3.2E-06   48.4   4.9   50  375-435   176-225 (233)
 62 d1ep5a_ b.47.1.3 (A:) Viral ca  93.0   0.053 3.8E-06   48.0   5.2   29  378-411   101-129 (156)
 63 d1wyka_ b.47.1.3 (A:) Viral ca  92.9   0.048 3.5E-06   48.0   4.8   29  378-411    97-125 (152)
 64 g1gg6.1 b.47.1.2 (A:,B:,C:) (a  92.9   0.072 5.2E-06   47.8   6.2   47  378-435   182-228 (238)
 65 d1fona_ b.47.1.2 (A:) Procarbo  92.6    0.11 7.7E-06   46.3   7.0   50  376-434   171-221 (232)
 66 g1h8d.1 b.47.1.2 (L:,H:) Throm  92.5   0.095 6.9E-06   48.7   6.8   32  377-408   220-251 (289)
 67 d1rjxb_ b.47.1.2 (B:) Plasmin(  92.5    0.31 2.2E-05   43.2  10.1   31  376-408   189-219 (247)
 68 d1vcpa_ b.47.1.3 (A:) Viral ca  92.4   0.073 5.3E-06   46.8   5.2   29  378-411    95-123 (149)
 69 g1rtf.1 b.47.1.2 (A:,B:) Two-c  91.9    0.19 1.4E-05   45.0   8.0   48  377-435   204-251 (260)
 70 d3rp2a_ b.47.1.2 (A:) Chymase   91.6    0.58 4.2E-05   41.2  10.7   47  372-435   170-216 (224)
 71 g1gj7.1 b.47.1.2 (A:,B:) Uroki  91.5     0.4 2.9E-05   42.7   9.6   33  375-409   199-231 (256)
 72 d1elta_ b.47.1.2 (A:) Elastase  91.5    0.15 1.1E-05   44.9   6.6   28  378-407   181-208 (236)
 73 d1os8a_ b.47.1.1 (A:) Trypsin   90.3    0.57 4.1E-05   41.4   9.3   46  380-435   168-213 (223)
 74 d1cqqa_ b.47.1.4 (A:) 3C cyste  90.2    0.38 2.8E-05   43.5   8.1   27  378-410   141-167 (180)
 75 d1elva1 b.47.1.2 (A:410-668) C  89.1       3 0.00022   37.0  13.4   33  376-408   200-233 (259)
 76 d2h6ma1 b.47.1.4 (A:1-212) 3C   80.2     3.4 0.00025   37.3   9.4   31  378-409   166-196 (212)
 77 d1l1na_ b.47.1.4 (A:) 3C cyste  73.6     4.9 0.00036   36.1   8.2   27  378-410   141-167 (180)
 78 d1mbma_ b.47.1.3 (A:) NSP4 pro  73.1    0.57 4.2E-05   42.8   1.6   26  378-409   108-133 (198)
 79 d2hrva_ b.47.1.4 (A:) 2A cyste  60.3       7 0.00051   34.0   6.0   37  363-409    89-125 (139)
 80 d1rrka1 b.47.1.2 (A:453-739) F  47.4     6.4 0.00047   35.9   3.9   24  381-406   219-242 (287)
 81 d2fp7b1 b.47.1.3 (B:19-170) NS  31.2     7.4 0.00054   34.3   1.3   19  381-404   114-132 (152)
 82 d2fomb1 b.47.1.3 (B:18-167) NS  25.3      13 0.00096   32.6   1.8   20  380-404   114-133 (150)

No 1  
>d2qaaa1 b.47.1.1 (A:16-242) Protease B {Streptomyces griseus, strain k1 [TaxId: 1911]}
Probab=99.84  E-value=1.4e-20  Score=174.90  Aligned_cols=185  Identities=22%  Similarity=0.213  Sum_probs=126.2

Q ss_pred             CCCCCCccCCCcccCcccceeeeEEEEEeCCCCceeEEEecCceeccCCCCCCCCCCCCCCcccccccCCCccccccccc
Q 040739          201 LRGGDPSIGSGSQVASQETYGTLGAIVKSQTGSRQVGFLTNRHVAVDLDYPNQKMFHPLPPTLGPGVYLGAVERATSFHH  280 (594)
Q Consensus       201 v~GG~~SIGggs~~~~~~taGTLGclVtD~~G~~~~yiLTNnHVla~~n~~~~~~~~pgdpILQPg~~DGG~~rd~~FIp  280 (594)
                      |.||. .|.+      ....||+|+.|++.   ...|||||+||......+            .....++.. ......-
T Consensus         1 ~~gG~-~~~~------~~~~CT~Gf~v~~~---~~~~ilTA~Hcv~~~~~~------------~~~~~~~~~-~g~~~~~   57 (185)
T d2qaaa1           1 ISGGD-AIYS------STGRCSLGFNVRSG---STYYFLTAGHCTDGATTW------------WANSARTTV-LGTTSGS   57 (185)
T ss_dssp             CCBTC-EEEC------SSCEEECCEEEEET---TEEEEEECHHHHTTCCEE------------ESSTTSCSE-EEEEEEE
T ss_pred             CcCcc-ceeC------CCCcEeeeEeEEEC---CccEEEECCCccCCCCEE------------EEEcCCCeE-eeeEEec
Confidence            35775 6643      23579999999986   467999999998764421            111122220 0011111


Q ss_pred             cCCCccccccccccccccCCCCCccccccccccccCcceeecccCcccccCCCeEEEEeecccceEEEEEEEEEEEeCCC
Q 040739          281 RRPLTFVRADGAFIPFADDFDMSTVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGRSSGLTTGTVLAYALEYNDEK  360 (594)
Q Consensus       281 ~~p~N~VDaD~AIi~va~~~d~s~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGRTTGlT~G~Itai~V~y~~~~  360 (594)
                      ..|.+    |+||+++......     ....+      ....+.+...+.+|+.|+|.|++||+++|.|.+++..++...
T Consensus        58 ~~~~~----D~All~~~~~~~~-----~~~~~------~~~~v~~~~~~~~G~~v~~~G~~tg~~~g~v~~~~~~~~~~~  122 (185)
T d2qaaa1          58 SFPNN----DYGIVRYTNTTIP-----KDGTV------GGQDITSAANATVGMAVTRRGSTTGTHSGSVTALNATVNYGG  122 (185)
T ss_dssp             ECSBS----CEEEEEECCSSSC-----CCSEE------TTEECCEECCCCTTCEEEEEETTTEEEEEEEEEEEEEEECST
T ss_pred             cCCCC----CeEEEEeccCCcc-----ccccc------CceeccCCCcCCCCCEEEEccCCCCcccceeEeeEEEEEcCC
Confidence            22444    7799998643211     11111      112233456789999999999999999999999986666544


Q ss_pred             CeEEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHHhhcCC
Q 040739          361 GICFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLNLLEL  440 (594)
Q Consensus       361 G~~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~L~V  440 (594)
                      + ..+.+++.++.    ++.+||||++||     + .+++|||++++....         ...+.+||.||..+|++|+|
T Consensus       123 ~-~~~~~~~~~~~----~~~~GdSGGPv~-----~-~~~~vGi~~~g~~~~---------~~~~~~~~~Pi~~~l~~~g~  182 (185)
T d2qaaa1         123 G-DVVYGMIRTNV----CAEPGDSGGPLY-----S-GTRAIGLTSGGSGNC---------SSGGTTFFQPVTEALSAYGV  182 (185)
T ss_dssp             T-CEEEEEEEESC----CCCTTCTTCEEE-----E-TTEEEEEEEEEEEET---------TTEEEEEEEEHHHHHHHHTC
T ss_pred             C-CeeeeEEEEee----eecCCcccceeE-----E-CCEEEEEEEEeecCC---------CCCceEEEEEHHHHHHHhCC
Confidence            4 34667888777    799999999999     4 579999999987543         12456899999999999999


Q ss_pred             eEE
Q 040739          441 DLI  443 (594)
Q Consensus       441 ~Lv  443 (594)
                      +|.
T Consensus       183 ~l~  185 (185)
T d2qaaa1         183 SVY  185 (185)
T ss_dssp             EEC
T ss_pred             eeC
Confidence            984


No 2  
>d2sgaa_ b.47.1.1 (A:) Protease A {Streptomyces griseus, strain k1 [TaxId: 1911]}
Probab=99.81  E-value=7.4e-20  Score=169.41  Aligned_cols=180  Identities=21%  Similarity=0.248  Sum_probs=126.4

Q ss_pred             CCCCCccCCCcccCcccceeeeEEEEEeCCCCceeEEEecCceeccCCCCCCCCCCCCCCcccccccCCCcccccccccc
Q 040739          202 RGGDPSIGSGSQVASQETYGTLGAIVKSQTGSRQVGFLTNRHVAVDLDYPNQKMFHPLPPTLGPGVYLGAVERATSFHHR  281 (594)
Q Consensus       202 ~GG~~SIGggs~~~~~~taGTLGclVtD~~G~~~~yiLTNnHVla~~n~~~~~~~~pgdpILQPg~~DGG~~rd~~FIp~  281 (594)
                      .||. .|.+      ....||+|+.|++.   ...|+|||+||....+.            ++-+..+|     .+|   
T Consensus         2 ~gg~-~~~~------~~~~ct~Gf~v~~~---~~~~vlTA~Hc~~~~~~------------~~vg~~~g-----~~~---   51 (181)
T d2sgaa_           2 AGGE-AITT------GGSRCSLGFNVSVN---GVAHALTAGHCTNISAS------------WSIGTRTG-----TSF---   51 (181)
T ss_dssp             CBTC-EEEE------TTEEEECCEEEEET---TEEEEEECHHHHTTCSE------------ETTEEEEE-----EEC---
T ss_pred             cCCc-eeeC------CCccEeeeEeEEEC---CCCEEEEChhhCCCCCe------------EEEEeccC-----ccC---
Confidence            5664 5542      23579999999876   47899999999876442            11122222     234   


Q ss_pred             CCCccccccccccccccCCCCCccccccccccccCcceeecccCcccccCCCeEEEEeecccceEEEEEEEEEEEeCCCC
Q 040739          282 RPLTFVRADGAFIPFADDFDMSTVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGRSSGLTTGTVLAYALEYNDEKG  361 (594)
Q Consensus       282 ~p~N~VDaD~AIi~va~~~d~s~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGRTTGlT~G~Itai~V~y~~~~G  361 (594)
                       |.+    |+|++++.+....   .+.+..    +....+.+.....+.+|+.|+|.|++||+++|.|.+++..+++..+
T Consensus        52 -p~~----D~Ali~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~~G~~v~~~G~~~g~~~g~v~~~~~~~~~~~~  119 (181)
T d2sgaa_          52 -PNN----DYGIIRHSNPAAA---DGRVYL----YNGSYQDITTAGNAFVGQAVQRSGSTTGLRSGSVTGLNATVNYGSS  119 (181)
T ss_dssp             -SBS----CEEEEEESCGGGC---CCEEEC----SSSCEEECCEECCCCTTCEEEEEETTTEEEEEEEEEEEEEEECGGG
T ss_pred             -Ccc----ceEEEEecCcccc---cceeec----CCCceeeecCCCcCCCCCEEEEeCCCCcccccceeeecceEEecCC
Confidence             555    7799987654322   122211    1111233345567899999999999999999999999866554322


Q ss_pred             eEEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHHhhcCCe
Q 040739          362 ICFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLNLLELD  441 (594)
Q Consensus       362 ~~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~L~V~  441 (594)
                       ..+.+++.+..    +..+||||++||     + .++++|+++||+.++         .....+||.||..+|+.|+|+
T Consensus       120 -~~~~~~~~~~~----~~~~GdSGGPv~-----~-~~~~vGi~sgg~~~~---------~~~~~~~~~pv~~~l~~~g~~  179 (181)
T d2sgaa_         120 -GIVYGMIQTNV----CAQPGDSGGSLF-----A-GSTALGLTSGGSGNC---------RTGGTTFYQPVTEALSAYGAT  179 (181)
T ss_dssp             -CEEEEEEEESC----CCCTTCTTCEEE-----E-TTEEEEEEEEEEEET---------TTEEEEEEEEHHHHHHHHTEE
T ss_pred             -CeEeeeEEEee----eccCCCcCCeeE-----E-CCEEEEEEEEecCCC---------CCCceEEEEEHHHHHHHhCCE
Confidence             34677887776    689999999999     4 578999999997643         123468999999999999999


Q ss_pred             EE
Q 040739          442 LI  443 (594)
Q Consensus       442 Lv  443 (594)
                      ||
T Consensus       180 ~~  181 (181)
T d2sgaa_         180 VL  181 (181)
T ss_dssp             EC
T ss_pred             eC
Confidence            86


No 3  
>d2h5ca1 b.47.1.1 (A:15A-245) alpha-Lytic protease {Lysobacter enzymogenes, 495 [TaxId: 69]}
Probab=99.71  E-value=4.5e-17  Score=150.86  Aligned_cols=184  Identities=19%  Similarity=0.242  Sum_probs=123.1

Q ss_pred             cceeeeEEEEEeCCCCceeEEEecCceeccCCCCCCCCCCCCCCcccccccCCCccccccccc-cCCCcccccccccccc
Q 040739          218 ETYGTLGAIVKSQTGSRQVGFLTNRHVAVDLDYPNQKMFHPLPPTLGPGVYLGAVERATSFHH-RRPLTFVRADGAFIPF  296 (594)
Q Consensus       218 ~taGTLGclVtD~~G~~~~yiLTNnHVla~~n~~~~~~~~pgdpILQPg~~DGG~~rd~~FIp-~~p~N~VDaD~AIi~v  296 (594)
                      ...||+||.|++.   ...|+|||+||.......            +.    ++.. ...|+- ..|.+    |+||+++
T Consensus        14 ~~~CS~Gf~v~~~---~~~~ilTA~Hc~~~~~~~------------~~----~~~~-~~~~~~~~~p~~----D~All~~   69 (198)
T d2h5ca1          14 ASLCSVGFSVTRG---ATKGFVTAGHCGTVNATA------------RI----GGAV-VGTFAARVFPGN----DRAWVSL   69 (198)
T ss_dssp             TEEEECCEEEEET---TEEEEEECGGGCCTTCEE------------EE----TTEE-EEEEEEEECSBS----CEEEEEE
T ss_pred             CCEEeeeEEEEEC---CCCEEEEChhcCCCCCeE------------EE----CCee-eeeEEeeecCCC----cEEEEEe
Confidence            3689999999987   467999999998663321            10    1100 001111 12444    7799988


Q ss_pred             ccCCCCCccccccccccccCcceeecccCcccccCCCeEEEEeecccceEEEEEEEEEEEeCCCCeEEEEEEEEECCCCC
Q 040739          297 ADDFDMSTVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGRSSGLTTGTVLAYALEYNDEKGICFLTDFLVVGENQQ  376 (594)
Q Consensus       297 a~~~d~s~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGRTTGlT~G~Itai~V~y~~~~G~~~f~dqIVt~~~g~  376 (594)
                      .....   ..+.+..    +.. .....+...+.+|+.|+|.|++++.+++.+...+..+....  ..+.+++.+..   
T Consensus        70 ~~~~~---~~~~~~~----~~~-~~~~~g~~~~~~G~~v~~~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---  136 (198)
T d2h5ca1          70 TSAQT---LLPRVAN----GSS-FVTVRGSTEAAVGAAVCRSGRTTGYQCGTITAKNVTANYAE--GAVRGLTQGNA---  136 (198)
T ss_dssp             CTTSE---EEEEEEE----TTE-EEECCBCCCCCTTCEEEEEETTTEEEEEEEEEEEEEEEETT--EEEEEEEEECS---
T ss_pred             cCCCc---cCceeec----CCc-cccccCceeeccCCcccccCcccceEEeeeeecccccccCC--ceeeeeEEEee---
Confidence            64321   1122211    111 12233567789999999999999999999999886655432  33567777766   


Q ss_pred             CCCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHHhhcCCeEEcC
Q 040739          377 TFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLNLLELDLITT  445 (594)
Q Consensus       377 ~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~L~V~Lvt~  445 (594)
                       ...+||||++||     +.++++||+++|+.....-.... .......++|+||..||++|+|+|+|.
T Consensus       137 -~~~~GdSGGPv~-----~~~g~vvGI~sgg~~~~~~~~~~-~~~~~~~~~~~pi~~vl~~~Gv~l~t~  198 (198)
T d2h5ca1         137 -CMGRGDSGGSWI-----TSAGQAQGVMSGGNVQSNGNNCG-IPASQRSSLFERLQPILSQYGLSLVTG  198 (198)
T ss_dssp             -CCBTTCTTCEEE-----CTTCBEEEEEEEECCCTTSBSTT-SCGGGCCEEEEEHHHHHHHHTCEECCC
T ss_pred             -eeecccccccEE-----cCCCEEEEEEccccccCCCcccc-ccCCCceEEEEEHHHHHHHcCCEEecC
Confidence             689999999999     88999999999987643111000 011134589999999999999999984


No 4  
>d1hpga_ b.47.1.1 (A:) Glutamic acid-specific protease {Streptomyces griseus [TaxId: 1911]}
Probab=99.56  E-value=2.8e-14  Score=127.91  Aligned_cols=177  Identities=16%  Similarity=0.154  Sum_probs=114.4

Q ss_pred             cceeeeEEEEEeCCCCceeEEEecCceeccCCCCCCCCCCCCCCcccccccCCCccccccccccCCCccccccccccccc
Q 040739          218 ETYGTLGAIVKSQTGSRQVGFLTNRHVAVDLDYPNQKMFHPLPPTLGPGVYLGAVERATSFHHRRPLTFVRADGAFIPFA  297 (594)
Q Consensus       218 ~taGTLGclVtD~~G~~~~yiLTNnHVla~~n~~~~~~~~pgdpILQPg~~DGG~~rd~~FIp~~p~N~VDaD~AIi~va  297 (594)
                      ...||+|++|++.   ...||||++||......           +..   .+++...........+.+    |+|++++.
T Consensus        11 ~~~Ct~Gf~v~~~---g~~~ilTAaHCv~~~~~-----------~~~---~~~~~~~~~~~~~~~~~~----D~a~~~~~   69 (187)
T d1hpga_          11 GSRCSAAFNVTKG---GARYFVTAGHCTNISAN-----------WSA---SSGGSVVGVREGTSFPTN----DYGIVRYT   69 (187)
T ss_dssp             TEEEECCEEEEET---TEEEEEECHHHHTTCSE-----------EES---STTCCEEEEEEEEECSBS----CEEEEEEC
T ss_pred             CCeEeeeEEEEcC---CCcEEEEchhcCCCCCe-----------eEE---CCCCEEEEEEEeecccCC----chhheecc
Confidence            4679999999986   47899999999876332           211   123311111111112333    77888875


Q ss_pred             cCCCCCccccccccccccCcceeecccCcccccCCCeEEEEeecccceEEEEEEEEEEEeCCCCeEEEEEEEEECCCCCC
Q 040739          298 DDFDMSTVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGRSSGLTTGTVLAYALEYNDEKGICFLTDFLVVGENQQT  377 (594)
Q Consensus       298 ~~~d~s~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGRTTGlT~G~Itai~V~y~~~~G~~~f~dqIVt~~~g~~  377 (594)
                      ......   ..+...    ........+......+..+.+.+.+.+...+.........+...  ....+++....    
T Consensus        70 ~~~~~~---~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~----  136 (187)
T d1hpga_          70 DGSSPA---GTVDLY----NGSTQDISSAANAVVGQAIKKSGSTTKVTSGTVTAVNVTVNYGD--GPVYNMVRTTA----  136 (187)
T ss_dssp             SSCCCC---SEEECS----SSCEEECCEECCCCTTCEEEEEETTTEEEEEEEEEEEEEEEETT--EEEEEEEEECC----
T ss_pred             cCcccc---eeEecC----CCcccccccceeeeccccccccccceeeeeeeeeeccccEEcCC--ccEeccEEcCc----
Confidence            432211   222221    11111123445678889999999988888887777765544432  33566777666    


Q ss_pred             CCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHHhhcCCeEE
Q 040739          378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLNLLELDLI  443 (594)
Q Consensus       378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~L~V~Lv  443 (594)
                      .+.+||||++|+     + ++++||++++|...++         ....++|.||..+|+.|+|+|.
T Consensus       137 ~~~~GDSGgPl~-----~-~~~~vGi~s~g~~~~~---------~~~~~~~~pv~~~l~~~g~~l~  187 (187)
T d1hpga_         137 CSAGGDSGGAHF-----A-GSVALGIHSGSSGCSG---------TAGSAIHQPVTEALSAYGVTVY  187 (187)
T ss_dssp             CCCTTCTTCEEE-----E-TTEEEEEEEEESCCBT---------TBCCCEEEEHHHHHHHHTCEEC
T ss_pred             ccccCCCCCeEE-----E-CCEEEEEEEEEecCCC---------CCCCEEEEEHHHHHHHhCCEeC
Confidence            688999999999     4 5789999999876541         2345899999999999999984


No 5  
>d1l1ja_ b.47.1.1 (A:) Protease Do (DegP, HtrA), catalytic domain {Thermotoga maritima [TaxId: 2336]}
Probab=98.56  E-value=5.9e-07  Score=85.19  Aligned_cols=95  Identities=19%  Similarity=0.233  Sum_probs=67.2

Q ss_pred             ccccCCCeEEEEeeccc----ceEEEEEEEEEEEeCCCCeEEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEE
Q 040739          327 ISSLIGKQVVKVGRSSG----LTTGTVLAYALEYNDEKGICFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIG  402 (594)
Q Consensus       327 ~~p~lG~~V~KvGRTTG----lT~G~Itai~V~y~~~~G~~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVG  402 (594)
                      ....+|+.|.-+|.--|    .+.|.+..+.-......+.....+++.++.    -..+|+||++||     |.++++||
T Consensus       126 ~~~~~G~~V~aiG~P~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~da----~i~~G~SGGPl~-----n~~G~VIG  196 (228)
T d1l1ja_         126 DKVKIGEWAIAIGNPLGFQHTVTVGVVSATNRRIPKPDGSGYYVGLIQTDA----AINPGNSGGPLL-----NIHGEVIG  196 (228)
T ss_dssp             GGCCTTCEEEEEECTTSSSCEEEEEEEEEEEEEEECTTSSCEEEEEEEESS----CCCTTTTTSEEE-----CSSSEEEE
T ss_pred             cccccCCcEEEEECCCCCCCceEeeeeeccccccccccCcCcccceeEEec----ccCCCCCCCcEE-----CCCCEEEE
Confidence            34689999999998655    356666666533333333344566777777    478999999999     89999999


Q ss_pred             EEEecCCCCCccccccCCCCCcceEeechHHHHhhcC
Q 040739          403 IIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLNLLE  439 (594)
Q Consensus       403 LlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~L~  439 (594)
                      |..+.....         +..+..|+-|+..+.+.|+
T Consensus       197 I~~~~~~~~---------~~~~i~faIp~~~i~~~l~  224 (228)
T d1l1ja_         197 INTAIVNPQ---------EAVNLGFAIPINTVKKFLD  224 (228)
T ss_dssp             EECCCSCCC---------SCCSCEEEEEHHHHHHHHG
T ss_pred             EEEEEecCC---------CCCCEEEEEEHHHHHHHHH
Confidence            998764322         2245678999888876553


No 6  
>d2z9ia2 b.47.1.1 (A:6-226) Protease PepD {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.48  E-value=2.8e-07  Score=85.96  Aligned_cols=101  Identities=14%  Similarity=0.133  Sum_probs=61.9

Q ss_pred             cccCCCeEEEEeeccc----ceEEEEEEEEEEEeC-C--CCeEEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCce
Q 040739          328 SSLIGKQVVKVGRSSG----LTTGTVLAYALEYND-E--KGICFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRP  400 (594)
Q Consensus       328 ~p~lG~~V~KvGRTTG----lT~G~Itai~V~y~~-~--~G~~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~a  400 (594)
                      .+..|+.|+-+|..-|    ...|.+.++...... .  .......+++.++.    --.+|.||++||     |.++++
T Consensus       105 ~~~~g~~v~~~g~p~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~i~~G~SGGPv~-----n~~G~v  175 (221)
T d2z9ia2         105 DLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDA----AINPGNSGGALV-----NMNAQL  175 (221)
T ss_dssp             GCCTTCEEEEEECGGGCTTEEEEEEEEEEEEEEEC-------CCEEEEEEECS----CCCTTCTTEEEE-----CTTSEE
T ss_pred             ccccCceeeeeeccCCCcccccccceeeccccccccccccccccccceEEEee----cccCCCCCCccC-----cCCCEE
Confidence            5689999999998766    446777766522111 1  11122345666666    467899999999     899999


Q ss_pred             EEEEEecCCCCCccccccCCCCCcceEeechHHHHhhc
Q 040739          401 IGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLNLL  438 (594)
Q Consensus       401 VGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~L  438 (594)
                      |||+.+.-...+.- ........+..|+-|+..|.+.|
T Consensus       176 VGI~~~~~~~~~~~-~~~~~~~~gi~faIP~~~v~~~l  212 (221)
T d2z9ia2         176 VGVNSAIATLGADS-ADAQSGSIGLGFAIPVDQAKRIA  212 (221)
T ss_dssp             EEEEEEECCC--------CCCCSSCEEEEEHHHHHHHH
T ss_pred             EEEEEEEecccccc-cccccCccCeEEEEEHHHHHHHH
Confidence            99997654321000 01111224567889988876554


No 7  
>d1lcya2 b.47.1.1 (A:6-210) Mitochondrial serine protease HtrA2, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.43  E-value=1.3e-07  Score=87.85  Aligned_cols=91  Identities=16%  Similarity=0.118  Sum_probs=57.4

Q ss_pred             ccccCCCeEEEEeeccc----ceEEEEEEEEEEEeCCCCeEEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEE
Q 040739          327 ISSLIGKQVVKVGRSSG----LTTGTVLAYALEYNDEKGICFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIG  402 (594)
Q Consensus       327 ~~p~lG~~V~KvGRTTG----lT~G~Itai~V~y~~~~G~~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVG  402 (594)
                      ..+..|+.|+-+|.-.+    ...|.+......+........-...+.++.    ...+|+||++||     |.++++||
T Consensus       111 ~~~~~G~~v~~iG~P~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~----~~~~G~SGGPv~-----d~~G~vVG  181 (205)
T d1lcya2         111 ADVRQGEFVVAMGSPFALQNTITSGIVSSAQRPARDLGLPQTNVEYIQTDA----AIDFGNAGGPLV-----NLDGEVIG  181 (205)
T ss_dssp             GGCCTTCEEEECCCTTSSSSCCEEEEBCSCSCC---------CCCCEEESS----CCSTTTTTSEEE-----ETTSCEEE
T ss_pred             ccCCCCCEEEEEECCcccCceEeeeEEEeccccccccCCCCccceEEEEee----eeCCCCCcCcEE-----CCCCEEEE
Confidence            35688999999987433    334444333211111101111123455555    467899999999     88999999


Q ss_pred             EEEecCCCCCccccccCCCCCcceEeechHHHHhhcC
Q 040739          403 IIWGGTANRGRLKLKIGQPPENWTSGVDLGRLLNLLE  439 (594)
Q Consensus       403 LlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~L~  439 (594)
                      |..++..             .++.|+-|++.+.+-|+
T Consensus       182 I~s~~~~-------------~g~~~aip~~~l~~~Ln  205 (205)
T d1lcya2         182 VNTMKVT-------------AGISFAIPSDRLREFLH  205 (205)
T ss_dssp             EEEEEEE-------------TTEEEEEEHHHHHHHTC
T ss_pred             EEeeEcc-------------CCeEEEEEHHHHHHhhC
Confidence            9987653             24689999999988774


No 8  
>d1agja_ b.47.1.1 (A:) Epidermolytic (exfoliative) toxin A {Staphylococcus aureus [TaxId: 1280]}
Probab=98.41  E-value=7.4e-08  Score=90.84  Aligned_cols=86  Identities=17%  Similarity=0.190  Sum_probs=49.2

Q ss_pred             cccCCCeEEEEeecccceEEEEEEEEEEEeCCCCeEEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEec
Q 040739          328 SSLIGKQVVKVGRSSGLTTGTVLAYALEYNDEKGICFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGG  407 (594)
Q Consensus       328 ~p~lG~~V~KvGRTTGlT~G~Itai~V~y~~~~G~~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGG  407 (594)
                      ....|+.|.-+|---|....+...-.+.......      .+....    ...+||||++||     |.++++|||+.++
T Consensus       149 ~~~~G~~v~~~GyP~~~~~~~~~~~~~~~~~~~~------~~~~~~----~~~~G~SGgPl~-----~~~g~vVGI~~~~  213 (242)
T d1agja_         149 DLKDGDKLELIGYPFDHKVNQMHRSEIELTTLSR------GLRYYG----FTVPGNSGSGIF-----NSNGELVGIHSSK  213 (242)
T ss_dssp             TCCTTCEEEEEECCTTTSTTCCEEEEEEECCGGG------SEEEEC----CCCGGGTTCEEE-----CTTSEEEEEEEEE
T ss_pred             cccCCcEEEEEEcCCCCccceeEecccccccccc------cEEEec----ccCCccCCCcEE-----CCCCeEEEEEeEe
Confidence            4678999998885333221111111112111111      122223    367899999999     8899999999988


Q ss_pred             CCCCCccccccCCCCCcceEeechHHHHh
Q 040739          408 TANRGRLKLKIGQPPENWTSGVDLGRLLN  436 (594)
Q Consensus       408 s~~~g~~~~~~~~~p~~~Tl~~pI~~VL~  436 (594)
                      ....+        ......++.||...+.
T Consensus       214 ~~~~~--------~~~~~~~av~i~~~i~  234 (242)
T d1agja_         214 VSHLD--------REHQINYGVGIGNYVK  234 (242)
T ss_dssp             EECSS--------TTCEEEEEEECCHHHH
T ss_pred             ecCCC--------CccceEEEEeCHHHHH
Confidence            64321        1133467777765554


No 9  
>d2o8la1 b.47.1.1 (A:1-216) V8 protease {Staphylococcus aureus [TaxId: 1280]}
Probab=98.30  E-value=1.7e-06  Score=79.18  Aligned_cols=28  Identities=46%  Similarity=0.792  Sum_probs=24.0

Q ss_pred             CCCCCCccceEEeeccCCCCCceEEEEEecCCC
Q 040739          378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTAN  410 (594)
Q Consensus       378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~  410 (594)
                      ...+|||||+|+     ++++++|||+++|..+
T Consensus       163 ~~~~G~SGgPv~-----~~~g~vVGI~s~g~~~  190 (216)
T d2o8la1         163 STTGGNSGSPVF-----NEKNEVIGIHWGGVPN  190 (216)
T ss_dssp             CCCTTCTTCEEE-----CTTSCEEEEEEEEETT
T ss_pred             CcCCCCCCCcEE-----CCCCEEEEEEeeecCC
Confidence            467999999999     8889999999887643


No 10 
>d1ky9a2 b.47.1.1 (A:11-259) Protease Do (DegP, HtrA), catalytic domain {Escherichia coli [TaxId: 562]}
Probab=98.26  E-value=3.1e-06  Score=81.69  Aligned_cols=90  Identities=20%  Similarity=0.157  Sum_probs=59.6

Q ss_pred             cccCCCeEEEEeecccc----eEEEEEEEEEEEeCCCCeEEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEEE
Q 040739          328 SSLIGKQVVKVGRSSGL----TTGTVLAYALEYNDEKGICFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGI  403 (594)
Q Consensus       328 ~p~lG~~V~KvGRTTGl----T~G~Itai~V~y~~~~G~~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGL  403 (594)
                      ...+|+.|.-+|.--|+    |.|.+.++.....   ......+.|.++.    --.+|.||++++     |.++++|||
T Consensus       147 ~~~~G~~v~aiG~P~g~~~tvt~~~~~~~~~~~~---~~~~~~~~iqtda----~i~~GnSGGPl~-----n~~G~vIGI  214 (249)
T d1ky9a2         147 ALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGL---NAENYENFIQTDA----AINRGNAGGALV-----NLNGELIGI  214 (249)
T ss_dssp             GCCTTCEEEEEECTTSSSCEEEEEEEEEESSCC--------CCCCEEESC----CCTTSCCCSEEE-----CTTSCEEEE
T ss_pred             cCCcCCEEEEEecccccCCceeecceeecccccc---cCccccceEEEee----eecCCCCCceEE-----CCCCEEEEE
Confidence            46899999999987664    4444544431111   1122345677776    478999999999     999999999


Q ss_pred             EEecCCCCCccccccCCCCCcceEeechHHHHhh
Q 040739          404 IWGGTANRGRLKLKIGQPPENWTSGVDLGRLLNL  437 (594)
Q Consensus       404 lfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~  437 (594)
                      ..+.-...        .+..+..|+-|+..+.+.
T Consensus       215 ~t~~~~~~--------~~~~gi~faIP~~~~~~~  240 (249)
T d1ky9a2         215 NTAILAPD--------GGNIGIGFAIPSNMVKNL  240 (249)
T ss_dssp             EECSSTTS--------CCCSSSEEEEEHHHHHHH
T ss_pred             EEEEeccC--------CCcccEEEEEEHHHHHHH
Confidence            87754321        122456788899877653


No 11 
>d2qf3a1 b.47.1.1 (A:43-252) Stress sensor protease DegS, catalytic domain {Escherichia coli [TaxId: 562]}
Probab=98.24  E-value=1.4e-06  Score=80.80  Aligned_cols=98  Identities=15%  Similarity=0.108  Sum_probs=57.4

Q ss_pred             ccccCCCeEEEEeecccceEEEEEEEEEEEeCCCC-eEEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEE
Q 040739          327 ISSLIGKQVVKVGRSSGLTTGTVLAYALEYNDEKG-ICFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIW  405 (594)
Q Consensus       327 ~~p~lG~~V~KvGRTTGlT~G~Itai~V~y~~~~G-~~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlf  405 (594)
                      ..+.+|+.|+-.|..-+............+..... .....+++.++.    ...+|+||++||     |.++++|||+.
T Consensus       105 ~~~~~g~~v~~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~a----~i~~G~SGGPv~-----n~~G~vVGI~~  175 (210)
T d2qf3a1         105 RVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDA----SINHGNSGGALV-----NSLGELMGINT  175 (210)
T ss_dssp             CCCCTTBEEEEEECGGGSSSEEEEEEEEESCC---------CCEEECS----CCCTTCTTCEEE-----ETTCCEEEEEE
T ss_pred             cccccceEEEEeccccccccccccccceeeeeeeeccccceeEEEEee----eEEeccCCCceE-----eecCEEEEEEE
Confidence            35789999999997655443333333221111000 011223566666    478999999999     89999999998


Q ss_pred             ecCCCCCccccccCCCCCcceEeechHHHHhhc
Q 040739          406 GGTANRGRLKLKIGQPPENWTSGVDLGRLLNLL  438 (594)
Q Consensus       406 GGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL~~L  438 (594)
                      ++....     ..+..+.++.|+-|+..|.+.|
T Consensus       176 ~~~~~~-----~~~~~~~~i~faIP~~~v~~~l  203 (210)
T d2qf3a1         176 LSFDKS-----NDGETPEGIGFAIPFQLATKIM  203 (210)
T ss_dssp             EEC-------------CCSCEEEEEHHHHHHHH
T ss_pred             EEeecc-----CCCccccceEEEEEHHHHHHHH
Confidence            765432     1112235678899977766544


No 12 
>d1lvmb_ b.47.1.3 (B:) TEV protease (nucleat inclusion protein A, NIA) {Tobacco etch virus, TEV [TaxId: 12227]}
Probab=98.02  E-value=9.3e-06  Score=77.06  Aligned_cols=70  Identities=14%  Similarity=0.113  Sum_probs=44.0

Q ss_pred             ccccCCCeEEEEeecc--cceEEEEEEEEEEEeCCCCeEEEEEEEEECCCCCCCCCCCCccceEEeeccCCC-CCceEEE
Q 040739          327 ISSLIGKQVVKVGRSS--GLTTGTVLAYALEYNDEKGICFLTDFLVVGENQQTFDLEGDSGSLILMKGENGE-KPRPIGI  403 (594)
Q Consensus       327 ~~p~lG~~V~KvGRTT--GlT~G~Itai~V~y~~~~G~~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~-~~~aVGL  403 (594)
                      ..+.+|+.|+.+|--.  ..+...|+.....+....+.     ++.+..    -..+|+||++++     |. .+++||+
T Consensus        99 ~~~~~Ge~V~aiG~p~~~~~~~~~v~~~~~~~~~~~~~-----~~~~~~----~t~~GnSGGPlv-----d~~dG~VVGI  164 (219)
T d1lvmb_          99 REPQREERICLVTTNFQTKSMSSMVSDTSCTFPSSDGI-----FWKHWI----QTKDGQCGSPLV-----STRDGFIVGI  164 (219)
T ss_dssp             CCCCTTCEEEEEEECCSCGGGCEEECCCEECEEETTTT-----EEEECB----CCCTTCTTCEEE-----ETTTCCEEEE
T ss_pred             CCCCcCCEEEEEEccCCCCceEEEEeccceeeccCCCc-----eEEEEE----EcCCCCCCCceE-----EcCCCEEEEE
Confidence            4678999999999532  22223333333333222222     233333    367899999999     74 6999999


Q ss_pred             EEecCCC
Q 040739          404 IWGGTAN  410 (594)
Q Consensus       404 lfGGs~~  410 (594)
                      +.++...
T Consensus       165 hs~~~~~  171 (219)
T d1lvmb_         165 HSASNFT  171 (219)
T ss_dssp             EEEEETT
T ss_pred             EEeeecc
Confidence            9988653


No 13 
>d1qtfa_ b.47.1.1 (A:) Exfoliative toxin B {Staphylococcus aureus [TaxId: 1280]}
Probab=97.90  E-value=1.3e-05  Score=76.28  Aligned_cols=28  Identities=36%  Similarity=0.404  Sum_probs=24.7

Q ss_pred             CCCCCCccceEEeeccCCCCCceEEEEEecCCC
Q 040739          378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTAN  410 (594)
Q Consensus       378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~  410 (594)
                      ...+|+|||+||     |.++++|||++||...
T Consensus       180 ~~~~G~SGgPv~-----n~~G~vVGI~~~g~~~  207 (246)
T d1qtfa_         180 YTEVGNSGSGIF-----NLKGELIGIHSGKGGQ  207 (246)
T ss_dssp             CCCGGGTTCEEE-----CTTCCEEEEEEEEETT
T ss_pred             eccCCCCCCcEE-----CCCCeEEEEEecccCC
Confidence            467899999999     8899999999998754


No 14 
>d2bhga1 b.47.1.4 (A:7-205) 3C cysteine protease (picornain 3C) {Foot-and-mouth disease virus FMDV [TaxId: 12110]}
Probab=97.86  E-value=7.9e-06  Score=74.67  Aligned_cols=86  Identities=19%  Similarity=0.184  Sum_probs=52.4

Q ss_pred             ccccCCCeEEEEeecccc----eEEEEEEEEEEEeCCCCeEEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEE
Q 040739          327 ISSLIGKQVVKVGRSSGL----TTGTVLAYALEYNDEKGICFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIG  402 (594)
Q Consensus       327 ~~p~lG~~V~KvGRTTGl----T~G~Itai~V~y~~~~G~~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVG  402 (594)
                      ..+..|+.|.-+|...+.    +.|.+.+..-.+....| ..+.+.+....    -..+||||++++..  ++..+.+||
T Consensus       101 ~~~~~g~~v~~ig~p~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~y~a----~t~~G~cGgplv~~--~~~~~~IvG  173 (199)
T d2bhga1         101 ARMKKGTPVVGVVNNADVGRLIFSGEALTYKDIVVSMDG-DTMPGLFAYKA----ATRAGYAGGAVLAK--DGADTFIVG  173 (199)
T ss_dssp             CEECTTCEEEEEEEETTTEEEEEEEEESSCEECCC------CCTTEEEEEC----CCCTTCTTCEEEEE--ETTEEEEEE
T ss_pred             ccccccceEEEEEcCCCCCceEEEEEEEEecceeecCCC-ccccCEEEEEe----ccCCCCcCCeEEEe--cCCeEEEEE
Confidence            356789999999988774    34444333211111111 22334555555    36799999999831  234567999


Q ss_pred             EEEecCCCCCccccccCCCCCcceEeechHH
Q 040739          403 IIWGGTANRGRLKLKIGQPPENWTSGVDLGR  433 (594)
Q Consensus       403 LlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~  433 (594)
                      |+.+|+.              +..|+.||.+
T Consensus       174 ih~aG~~--------------g~G~a~~it~  190 (199)
T d2bhga1         174 THSAGGN--------------GVGYCSCVSR  190 (199)
T ss_dssp             EEEEEET--------------TEEEEEECCH
T ss_pred             EEeCCCC--------------CEEEEEEccH
Confidence            9999974              3478888763


No 15 
>d1p3ca_ b.47.1.1 (A:) Glutamyl endopeptidase {Bacillus intermedius [TaxId: 1400]}
Probab=97.38  E-value=0.00011  Score=66.00  Aligned_cols=28  Identities=29%  Similarity=0.491  Sum_probs=23.9

Q ss_pred             CCCCCCccceEEeeccCCCCCceEEEEEecCCC
Q 040739          378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTAN  410 (594)
Q Consensus       378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~  410 (594)
                      ...+||||+.++     +.++++|||+.+|...
T Consensus       165 ~~~~G~SGgPl~-----~~~~~lvGi~s~g~~~  192 (215)
T d1p3ca_         165 DTFSGNSGSAML-----DQNQQIVGVHNAGYSN  192 (215)
T ss_dssp             CCCTTCTTCEEE-----CTTSCEEEECCEEEGG
T ss_pred             ccCCCCccCeEE-----CCCCEEEEEEEeccCC
Confidence            477899999999     7889999999887643


No 16 
>d1arba_ b.47.1.1 (A:) Achromobacter protease {Achromobacter lyticus, strain m497-1 [TaxId: 224]}
Probab=96.35  E-value=0.0085  Score=55.76  Aligned_cols=30  Identities=30%  Similarity=0.475  Sum_probs=24.7

Q ss_pred             CCCCCCCCccceEEeeccCCCCCceEEEEEecCCC
Q 040739          376 QTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTAN  410 (594)
Q Consensus       376 ~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~  410 (594)
                      ..-+.+||||++++     +.++..||++.+|...
T Consensus       186 ~~~~c~GDSGGPL~-----~~~g~~vGvvsgg~s~  215 (263)
T d1arba_         186 GGVTEPGSSGSPIY-----SPEKRVLGQLHGGPSS  215 (263)
T ss_dssp             SCCCCTTCTTCEEE-----CTTSCEEEEEEECSCC
T ss_pred             CccccCCCCcceEE-----ecCCCEEEEEEEEEeC
Confidence            33477899999999     6788999999988754


No 17 
>d1hj8a_ b.47.1.2 (A:) Trypsin(ogen) {North atlantic salmon (Salmo salar) [TaxId: 8030]}
Probab=96.33  E-value=0.01  Score=53.03  Aligned_cols=157  Identities=12%  Similarity=0.099  Sum_probs=74.4

Q ss_pred             eeeeEEEEEeCCCCceeEEEecCceeccCCCCCCCCCCCCCCcccccccCCCc--ccccccc--ccCCCccccccccccc
Q 040739          220 YGTLGAIVKSQTGSRQVGFLTNRHVAVDLDYPNQKMFHPLPPTLGPGVYLGAV--ERATSFH--HRRPLTFVRADGAFIP  295 (594)
Q Consensus       220 aGTLGclVtD~~G~~~~yiLTNnHVla~~n~~~~~~~~pgdpILQPg~~DGG~--~rd~~FI--p~~p~N~VDaD~AIi~  295 (594)
                      .|+ |.|+..+      ++||++||+........     ......  ...+..  ....+.+  |.......+.|+||++
T Consensus        24 ~C~-GtLIs~~------~VLTAAhCv~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~diALl~   89 (222)
T d1hj8a_          24 FCG-GSLVNEN------WVVSAAHCYKSRVEVRL-----GEHNIK--VTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIK   89 (222)
T ss_dssp             EEE-EEEEETT------EEEECGGGCCSSCEEEE-----SCSBTT--SCCSCCEEEEEEEEEECTTCBTTTTBSCCEEEE
T ss_pred             EEE-EEEeeCC------EEEeCceecccccCcce-----eecccc--ccCCccccccceEEEecccccccccCCcEEEEe
Confidence            444 7788775      89999999877553100     000000  000110  0001111  1122233456999999


Q ss_pred             cccCCCCCccccccccccccCcceeecccCcccccCCCeEEEEeecccceEE----EEEEEEEEEeCC------CCeEEE
Q 040739          296 FADDFDMSTVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGRSSGLTTG----TVLAYALEYNDE------KGICFL  365 (594)
Q Consensus       296 va~~~d~s~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGRTTGlT~G----~Itai~V~y~~~------~G~~~f  365 (594)
                      +.++...+.   .+..   |      -| .......++.+.-.|.......+    ....+.+.+-..      -+..+-
T Consensus        90 l~~~v~~~~---~~~p---i------cl-~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~  156 (222)
T d1hj8a_          90 LSKPATLNT---YVQP---V------AL-PTSCAPAGTMCTVSGWGNTMSSTADSNKLQCLNIPILSYSDCNNSYPGMIT  156 (222)
T ss_dssp             ESSCCCCSS---SCCC---C------BC-CSSCCCTTCEEEEEESSCCCCSSCCTTBCEEEEEEBCCHHHHHHHSTTCCC
T ss_pred             cccceeeec---eeEE---E------EC-CCcCCCCCceEEEEeccccccccccccccEEEEEEEeCHHHHhhhcccccc
Confidence            987654432   2211   1      01 12334566666666653322211    112222322110      011111


Q ss_pred             EEEEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739          366 TDFLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTA  409 (594)
Q Consensus       366 ~dqIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~  409 (594)
                      .+++.+.. ++....-.||||+.++      .+.+++||+.-|..
T Consensus       157 ~~~~C~~~~~~~~~~c~gdsGgPl~------~~~~l~Gi~S~g~~  195 (222)
T d1hj8a_         157 NAMFCAGYLEGGKDSCQGDSGGPVV------CNGELQGVVSWGYG  195 (222)
T ss_dssp             TTEEEESCTTSSCBCCTTCTTCEEE------ETTEEEEEEEECSS
T ss_pred             cceEEEccCCCCcccccCCcccEEE------ECCEEEEEEEEecC
Confidence            23444433 2334456899999998      35789999876543


No 18 
>g2pka.1 b.47.1.2 (A:,B:) Kallikrein A {Pig (Sus scrofa) [TaxId: 9823]}
Probab=96.22  E-value=0.021  Score=51.34  Aligned_cols=43  Identities=23%  Similarity=0.114  Sum_probs=28.1

Q ss_pred             CCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739          379 DLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL  435 (594)
Q Consensus       379 S~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL  435 (594)
                      .-.||||+.++      .+++++||+.-|...+++     .   ...++|+.|...+
T Consensus       179 ~c~gd~G~pl~------~~~~l~GI~S~g~~~c~~-----~---~~p~v~t~V~~~~  221 (232)
T g2pka.1         179 TCMGDSGGPLI------CNGMWQGITSWGHTPCGS-----A---NKPSIYTKLIFYL  221 (232)
T ss_dssp             CCTTCTTCEEE------ETTEEEEEECCCCSSTTC-----T---TCCEEEEEGGGGH
T ss_pred             cccCCCCCeEE------ECCEEEEEEEEcCCCCCC-----C---CCCeEEEEHHHHH
Confidence            45799999998      357899999866544411     1   2235666665544


No 19 
>d1nn6a_ b.47.1.2 (A:) Chymase (mast cell protease I) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.19  E-value=0.0076  Score=54.02  Aligned_cols=43  Identities=19%  Similarity=0.181  Sum_probs=28.8

Q ss_pred             CCCCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739          376 QTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL  435 (594)
Q Consensus       376 ~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL  435 (594)
                      ....-.||||+.++      .+..++||..-|....           ...++|+.|...+
T Consensus       172 ~~~~c~gDsG~PL~------~~~~l~GI~s~g~~~~-----------~~p~vyt~v~~y~  214 (224)
T d1nn6a_         172 TKSAFKGDSGGPLL------CAGVAQGIVSYGRSDA-----------KPPAVFTRISHYR  214 (224)
T ss_dssp             C--CCCCCTTCEEE------ETTEEEEEEEECCTTC-----------CSCEEEEEHHHHH
T ss_pred             cccccCCCccceEE------ECCEEEEEEEECCCCC-----------CCCeEEEEHHHHH
Confidence            34467799999998      3578999997665432           2236777776655


No 20 
>d1gvza_ b.47.1.2 (A:) Prostate specific antigen (PSA kallikrein) {Horse (Equus caballus) [TaxId: 9796]}
Probab=96.12  E-value=0.017  Score=51.50  Aligned_cols=106  Identities=15%  Similarity=0.117  Sum_probs=54.5

Q ss_pred             ccccccccccccCCCCCccccccccccccCcceeecccCcccccCCCeEEEEeecc-----cceEEEEEEEEEEEeCC--
Q 040739          287 VRADGAFIPFADDFDMSTVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGRSS-----GLTTGTVLAYALEYNDE--  359 (594)
Q Consensus       287 VDaD~AIi~va~~~d~s~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGRTT-----GlT~G~Itai~V~y~~~--  359 (594)
                      ++-|+||+++.++...+   +.+..   +    .+   .......++.+...|+-+     +.+......+.+.+.+.  
T Consensus        93 ~~~Diali~L~~pv~~~---~~v~p---~----~l---~~~~~~~~~~~~~~g~g~~~~~~~~~~~~l~~~~~~~~~~~~  159 (237)
T d1gvza_          93 ISHDLMLLRLAQPARIT---DAVKI---L----DL---PTQEPKLGSTCYTSGWGLISTFTNRGSGTLQCVELRLQSNEK  159 (237)
T ss_dssp             CTTCCEEEEESSCCCCB---TTBCC---C----CC---CSSCCCTTCEEEEEEEECSCTTTCSEEEEEEEEEEEEECGGG
T ss_pred             cccceEEEEECCceecc---ccccc---c----cc---cccccccceeEEEEeeeeeccccccccceeeEEEEEeecHHH
Confidence            44588999998764332   22211   1    01   112345566666655432     22333344444333221  


Q ss_pred             ----CCeEEEE-EEEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecCCCC
Q 040739          360 ----KGICFLT-DFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANR  411 (594)
Q Consensus       360 ----~G~~~f~-dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~  411 (594)
                          .+..... ........+......||||+.++      .++.++|+..-|...+
T Consensus       160 C~~~~~~~~~~~~~~~~~~~~~~~~~~gdsG~pl~------~~~~l~Gv~s~g~~~c  210 (237)
T d1gvza_         160 CARAYPEKMTEFVLCATHRDDSGSICLGDSGGALI------CDGVFQGITSWGYSEC  210 (237)
T ss_dssp             GCSSCGGGCCTTEEEEECSSTTCEECGGGTTCEEE------ETTEEEEEECCCSSSC
T ss_pred             HHhhcccccccccccceecccccccccCCCCCcEE------EcCEEEEEEEeccCCC
Confidence                0111111 12233334456788999999998      3579999986555444


No 21 
>d1op0a_ b.47.1.2 (A:) Venom serine protease {Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]}
Probab=96.03  E-value=0.015  Score=52.29  Aligned_cols=30  Identities=23%  Similarity=0.200  Sum_probs=22.1

Q ss_pred             CCCCCCCCccceEEeeccCCCCCceEEEEEecCCCC
Q 040739          376 QTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANR  411 (594)
Q Consensus       376 ~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~  411 (594)
                      ......||||++++      .+++++|++.-|...+
T Consensus       172 ~~~~~~g~~G~Pl~------~~~~l~Gi~S~g~~~c  201 (234)
T d1op0a_         172 GKDTCGGDSGGPLI------CNGQFQGIVSYGAHPC  201 (234)
T ss_dssp             CCBCCTTCTTCEEE------ETTEEEEEEEECCSST
T ss_pred             ccccccCCCCceEE------EcCEEEEEEEEcCCCC
Confidence            34566799999998      3578999986555443


No 22 
>d2z7fe1 b.47.1.2 (E:16-243) Elastase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.75  E-value=0.032  Score=49.15  Aligned_cols=23  Identities=30%  Similarity=0.053  Sum_probs=18.3

Q ss_pred             CCCCCccceEEeeccCCCCCceEEEEEec
Q 040739          379 DLEGDSGSLILMKGENGEKPRPIGIIWGG  407 (594)
Q Consensus       379 S~~GDSGSlVl~~~~~d~~~~aVGLlfGG  407 (594)
                      .-.||||+.++      .++.++|++.-+
T Consensus       168 ~C~gdsG~Pl~------~~~~l~GI~s~~  190 (218)
T d2z7fe1         168 VCFGDSGSPLV------CNGLIHGIASFV  190 (218)
T ss_dssp             CCTTCTTCEEE------ETTEEEEEEEEE
T ss_pred             ccccccCCCEE------ECCEEEEEEEEe
Confidence            46799999998      357899998533


No 23 
>d1npma_ b.47.1.2 (A:) Neuropsin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.73  E-value=0.032  Score=49.63  Aligned_cols=54  Identities=20%  Similarity=0.202  Sum_probs=33.3

Q ss_pred             EEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739          368 FLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL  435 (594)
Q Consensus       368 qIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL  435 (594)
                      ++-+........-.||||+.++      .+..++|++.-|...+++.        ...++|+.|..-+
T Consensus       164 ~~C~~~~~~~~~c~gd~G~pl~------~~~~l~Gi~S~g~~~c~~~--------~~p~vyt~V~~~~  217 (225)
T d1npma_         164 MVCAGSSNGADTCQGDSGGPLV------CDGMLQGITSWGSDPCGKP--------EKPGVYTKICRYT  217 (225)
T ss_dssp             EEEEECTTCCBCCTTCTTCEEE------ETTEEEEEEEECCSSSCBT--------TBCEEEEEHHHHH
T ss_pred             EEEecCCCCCccccCCCCceEE------EccEEEEEEEECCCCCCCC--------CCCEEEEEHHHHH
Confidence            3433332334567899999998      3578999997665544221        2335677766544


No 24 
>d1j16a_ b.47.1.2 (A:) Trypsin(ogen) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=95.69  E-value=0.044  Score=48.86  Aligned_cols=121  Identities=17%  Similarity=0.192  Sum_probs=60.1

Q ss_pred             ccccccccccccCCCCCccccccccccccCcceeecccCcccccCCCeEEEEeecccceEE-----EEEEEEEEEeC---
Q 040739          287 VRADGAFIPFADDFDMSTVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGRSSGLTTG-----TVLAYALEYND---  358 (594)
Q Consensus       287 VDaD~AIi~va~~~d~s~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGRTTGlT~G-----~Itai~V~y~~---  358 (594)
                      .+.|+||+++.++...+.   .+.   +|      -| .......|+.+.-.|.-.....|     ....+.+.+.+   
T Consensus        81 ~~~diAll~L~~~v~~~~---~~~---pi------cL-~~~~~~~~~~~~~~g~g~~~~~~~~~~~~l~~~~~~~~~~~~  147 (223)
T d1j16a_          81 YNNDIMLIKLSSPVKLNA---RVA---TV------AL-PSSCAPAGTQCLISGWGNTLSSGVNEPDLLQCLDAPLLPQAD  147 (223)
T ss_dssp             TBTCCEEEEESSCCCCBT---TBC---CC------BC-CSSCCCTTCEEEEEESSCCCSSSCCCCSBCEEEEEEEECHHH
T ss_pred             cceeEEEEEecCccccce---eEE---EE------ec-CCcCCCCCCEEEEEeeeeeeCCCccCcceeeEEEEEEEEhhH
Confidence            445889999987654331   221   11      11 12234566666655553322222     22233333321   


Q ss_pred             ---CCCeEEEEEEEEECCC-CCCCCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHH
Q 040739          359 ---EKGICFLTDFLVVGEN-QQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRL  434 (594)
Q Consensus       359 ---~~G~~~f~dqIVt~~~-g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~V  434 (594)
                         ..+..+..+++-+... +....-.||||+.++      .+++++||+.-|...+         .+...++|+.|..-
T Consensus       148 C~~~~~~~~~~~~~C~~~~~~~~~~c~gd~g~pl~------~~~~L~Gi~s~~~~~~---------~~~~p~vft~v~~~  212 (223)
T d1j16a_         148 CEASSSFIITDNMVCVGFLEGGKDACQGDSGGPVV------CNGELQGIVSWGYGCA---------LPDNPGVYTKVCNY  212 (223)
T ss_dssp             HHSSSSCCCCTTEEEESCTTCSCBCCTTCTTCEEE------ETTEEEEEEEECSSSS---------CTTCCEEEEEGGGG
T ss_pred             hhccccceeCCCceEEecCCCCCcccCCccCCcEE------EeeEEEEEEEEccCCC---------CCCCCEEEEEhHHh
Confidence               1111222344444332 233445699999998      3578999987665432         11333667766554


Q ss_pred             H
Q 040739          435 L  435 (594)
Q Consensus       435 L  435 (594)
                      +
T Consensus       213 ~  213 (223)
T d1j16a_         213 V  213 (223)
T ss_dssp             H
T ss_pred             H
Confidence            4


No 25 
>d1q3xa1 b.47.1.2 (A:445-686) Mannan-binding lectin serine protease 2 (MASP-2), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.62  E-value=0.028  Score=50.61  Aligned_cols=53  Identities=19%  Similarity=0.189  Sum_probs=30.3

Q ss_pred             CCCCCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739          375 QQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL  435 (594)
Q Consensus       375 g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL  435 (594)
                      +..-...||||+.++.....+..-.++||..=|...+++        +...++|+.|..-+
T Consensus       180 ~~~~~c~gdsGgpl~~~~~~~~~~~l~Gi~S~g~~~c~~--------~~~p~vft~v~~~~  232 (242)
T d1q3xa1         180 GGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGE--------AGQYGVYTKVINYI  232 (242)
T ss_dssp             CCSBCCTTCTTCEEEEEETTTTEEEEEEEEEECCSSTTC--------TTCCEEEEEGGGGH
T ss_pred             CCccccccccccceEEeeCCCCeEEEEEEEEeCCCCCCC--------CCCCEEEEEHHHhH
Confidence            334557899999998532222223589998644443321        13336676665543


No 26 
>g1fiw.1 b.47.1.2 (L:,A:) Beta-acrosin {Sheep (Ovis aries) [TaxId: 9940]}
Probab=95.58  E-value=0.05  Score=50.20  Aligned_cols=35  Identities=23%  Similarity=0.267  Sum_probs=23.4

Q ss_pred             CCCCCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739          375 QQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTA  409 (594)
Q Consensus       375 g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~  409 (594)
                      +..-.-.||||+.++.....+..-.++||...|..
T Consensus       204 ~~~~~c~gd~G~pl~~~~~~~~~~~L~GI~s~g~~  238 (274)
T g1fiw.1         204 GKIDTCQGDSGGPLMCKDSAENSYVVVGITSWGVG  238 (274)
T ss_dssp             CSSBCCTTCTTCEEEEECSSSSCEEEEEEEEECSS
T ss_pred             CCCCCccCCCcCcEEEEeCCCCeEEEEEEEEeCCC
Confidence            34456779999999854222333469999976653


No 27 
>d1fuja_ b.47.1.2 (A:) Myeloblastin, PR3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.57  E-value=0.061  Score=47.34  Aligned_cols=121  Identities=12%  Similarity=-0.034  Sum_probs=58.4

Q ss_pred             cccccccccccCCCCCccccccccccccCcceeecccCcccccCCCeEEEEeecccceEEE----EEEEEEEEeCCCCeE
Q 040739          288 RADGAFIPFADDFDMSTVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGRSSGLTTGT----VLAYALEYNDEKGIC  363 (594)
Q Consensus       288 DaD~AIi~va~~~d~s~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGRTTGlT~G~----Itai~V~y~~~~G~~  363 (594)
                      +.|+|+++++++...+   +.|..   +    .+.. .......++...-.|...-.+.|.    ...+.+......  +
T Consensus        89 ~~diAll~L~~~~~~~---~~v~p---i----cl~~-~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~~~~~~~~~~--~  155 (221)
T d1fuja_          89 LNDILLIQLSSPANLS---ASVAT---V----QLPQ-QDQPVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTVVTFF--C  155 (221)
T ss_dssp             BCCCEEEEESSCCCCC---SSCCC---C----BCCC-TTCCCCTTCEEEEEESSBSCSSSCBCSBCEEEEEEEECTT--C
T ss_pred             ccEEEEEEcccccccc---ceEEE---E----Eecc-cccccCCCceEEEecccccccccccCccceeeeeeeeeec--c
Confidence            3488999998765433   22211   1    1100 111234566677677655443332    222333332211  0


Q ss_pred             EEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739          364 FLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL  435 (594)
Q Consensus       364 ~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL  435 (594)
                      .-............-.-.||||+.++      .++.++||..-+...++.        .....+|+.|...+
T Consensus       156 ~~~~~~~~~~~~~~~~c~gd~G~pl~------~~~~l~Gi~s~~~~gc~~--------~~~p~vyt~v~~~~  213 (221)
T d1fuja_         156 RPHNICTFVPRRKAGICFGDSGGPLI------CDGIIQGIDSFVIWGCAT--------RLFPDFFTRVALYV  213 (221)
T ss_dssp             CTTEEEEECSSSSCBCCTTCTTCEEE------ETTEEEEEEEECSSSTTC--------SSSCEEEEEGGGGH
T ss_pred             ccccceeccccCCCceeCCccCCCEE------EeCEEEEEEEEEECCCCC--------CCCCeEEEEHHHhH
Confidence            00111111222333456799999998      357999998654432211        12235677765544


No 28 
>d1ao5a_ b.47.1.2 (A:) Kallikrein-13 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.55  E-value=0.03  Score=50.16  Aligned_cols=46  Identities=17%  Similarity=0.067  Sum_probs=30.1

Q ss_pred             CCCCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739          376 QTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL  435 (594)
Q Consensus       376 ~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL  435 (594)
                      ....-.||||+.++      .++.++|+..-|...+++        +...++|+.|...+
T Consensus       181 ~~~~c~gdsG~pl~------~~~~l~Gi~S~g~~~c~~--------~~~p~vft~V~~y~  226 (237)
T d1ao5a_         181 GKDTCRDDSGGPLI------CDGILQGTTSYGPVPCGK--------PGVPAIYTNLIKFN  226 (237)
T ss_dssp             SCBCCTTCTTCEEE------ETTEEEEEEEECCSSTTC--------TTCCEEEECGGGGH
T ss_pred             CCcccCCCCCCeeE------EccEEEEEEEEecCCCCC--------CCCCeEEEEHHHHH
Confidence            34567799999999      357999999766654422        12235666665544


No 29 
>d1tona_ b.47.1.2 (A:) Tonin {Rat (Rattus rattus) [TaxId: 10117]}
Probab=95.50  E-value=0.055  Score=48.16  Aligned_cols=44  Identities=20%  Similarity=0.164  Sum_probs=30.5

Q ss_pred             CCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739          378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL  435 (594)
Q Consensus       378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL  435 (594)
                      -.-.||||+.++      .+..++||+..|...++..        ...++|+.|...+
T Consensus       181 ~~c~gdsG~Pl~------~~~~l~Gi~S~g~~~c~~~--------~~p~vyt~v~~y~  224 (235)
T d1tona_         181 DTCAGDSGGPLI------CDGVLQGITSGGATPCAKP--------KTPAIYAKLIKFT  224 (235)
T ss_dssp             BCCTTCTTCEEE------ETTEEEEEECCCCSSCSCT--------TCCEEEEEGGGGH
T ss_pred             cccCCCcCCeEE------EcCEEEEEEEeCCCCCCCC--------CCCeEEEEHHHHH
Confidence            355799999999      3579999998777655222        3336777766554


No 30 
>d1bioa_ b.47.1.2 (A:) Factor D {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.50  E-value=0.029  Score=49.25  Aligned_cols=44  Identities=16%  Similarity=0.118  Sum_probs=29.8

Q ss_pred             CCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739          378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL  435 (594)
Q Consensus       378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL  435 (594)
                      -...||||+.++      -+..++|++.-|...+|+        +...++|+.|...+
T Consensus       177 ~~~~gdsG~Pl~------~~~~LvGi~S~g~~~c~~--------~~~p~v~t~v~~~~  220 (228)
T d1bioa_         177 DSCKGDSGGPLV------CGGVLEGVVTSGSRVCGN--------RKKPGIYTRVASYA  220 (228)
T ss_dssp             BCCTTTTTCEEE------ETTEEEEEECCSCCCSSC--------TTSCEEEEEGGGGH
T ss_pred             CcccCCcCccEE------EcCEEEEEEEECCCCCCC--------CCCCEEEEEHHHHH
Confidence            466799999999      357999999766554421        13346777765544


No 31 
>d1gdna_ b.47.1.2 (A:) Trypsin(ogen) {Mold (Fusarium oxysporum) [TaxId: 5507]}
Probab=95.44  E-value=0.021  Score=50.70  Aligned_cols=29  Identities=28%  Similarity=0.340  Sum_probs=23.0

Q ss_pred             CCCCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739          376 QTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTA  409 (594)
Q Consensus       376 ~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~  409 (594)
                      ....-.||||+.++     ..+..++|++.-|..
T Consensus       172 ~~~~c~~dsG~pl~-----~~~~~l~GI~S~g~~  200 (224)
T d1gdna_         172 GKDSCQGDSGGPIV-----DSSNTLIGAVSWGNG  200 (224)
T ss_dssp             CCBCCTTCTTCEEE-----CTTCCEEEEEEECSS
T ss_pred             CccccccccCCceE-----ecCCEEEEEEEeCCC
Confidence            33567899999999     567899999987654


No 32 
>d1eufa_ b.47.1.2 (A:) Duodenase {Cow (Bos taurus) [TaxId: 9913]}
Probab=95.32  E-value=0.017  Score=51.50  Aligned_cols=43  Identities=19%  Similarity=0.246  Sum_probs=28.6

Q ss_pred             CCCCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739          376 QTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL  435 (594)
Q Consensus       376 ~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL  435 (594)
                      ....-.||||+.++.      ++.++|++.-|....           ....+|..|...+
T Consensus       174 ~~~~c~~dsGgpl~~------~~~l~Gi~s~g~~~~-----------~~p~vft~V~~y~  216 (224)
T d1eufa_         174 RKNSFSGDSGGPLVC------NGVAQGIVSYGRNDG-----------TTPDVYTRISSFL  216 (224)
T ss_dssp             CCBCCTTCTTCEEEE------TTEEEEEEEECCTTC-----------CSCEEEEEGGGTH
T ss_pred             ccccccCCCCCeEEE------cCEEEEEEEEcCCCC-----------CCCeEEEEHHHHH
Confidence            334567999999993      568999987765432           2335676665544


No 33 
>d1lo6a_ b.47.1.2 (A:) Kallikrein 6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.26  E-value=0.064  Score=47.56  Aligned_cols=52  Identities=19%  Similarity=0.141  Sum_probs=32.4

Q ss_pred             EECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739          370 VVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL  435 (594)
Q Consensus       370 Vt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL  435 (594)
                      ......+.....||||++++      .+++++|++.-|...+++        +....+|+.|...+
T Consensus       162 ~~~~~~~~~~c~gd~G~Pl~------~~~~l~Gi~S~g~~~c~~--------~~~p~vyt~v~~~~  213 (221)
T d1lo6a_         162 AGDEKYGKDSCQGDSGGPLV------CGDHLRGLVSWGNIPCGS--------KEKPGVYTNVCRYT  213 (221)
T ss_dssp             EECTTTCCBCCTTTTTCEEE------ETTEEEEEEEECCSSCCC--------SSSCEEEEEGGGGH
T ss_pred             eeccccCCCCccCCCCCcEE------ECCEEEEEEEEccCCCCC--------CCCCeEEEEHHHHH
Confidence            33444456778899999998      356899999655543311        12335666665543


No 34 
>d1a7sa_ b.47.1.2 (A:) Heparin binding protein, HBP {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.10  E-value=0.076  Score=46.98  Aligned_cols=30  Identities=13%  Similarity=0.028  Sum_probs=23.7

Q ss_pred             CCCCCCCCccceEEeeccCCCCCceEEEEEecCCCC
Q 040739          376 QTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANR  411 (594)
Q Consensus       376 ~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~  411 (594)
                      ......||||+.++      .+..++||+.-|...+
T Consensus       167 ~~~~c~gdsG~Pl~------~~~~l~Gi~S~~~~~c  196 (225)
T d1a7sa_         167 RGGICNGDGGTPLV------CEGLAHGVASFSLGPC  196 (225)
T ss_dssp             SCBCCTTCTTCEEE------ETTEEEEEEEEECSST
T ss_pred             ccccccCCCCCCEE------EeCEEEEEEEECCCCC
Confidence            44678899999999      3688999998766544


No 35 
>d1sgfa_ b.47.1.2 (A:) 7S NGF protease subunits {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.96  E-value=0.043  Score=48.73  Aligned_cols=51  Identities=18%  Similarity=0.092  Sum_probs=31.7

Q ss_pred             ECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739          371 VGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL  435 (594)
Q Consensus       371 t~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL  435 (594)
                      ....++.....||+|+.++      .++.++|++.-|...+++.        ...++|+.|...+
T Consensus       167 ~~~~~~~~~~~~d~G~pl~------~~~~l~Gv~S~g~~~c~~~--------~~p~vyt~V~~~~  217 (228)
T d1sgfa_         167 GEMDGGSYTCEHDSGGPLI------CDGILQGITSWGPEPCGEP--------TEPSVYTKLIKFS  217 (228)
T ss_dssp             EECSSSEEECCCCTTCEEE------ETTEEEEEECCCCSSCCCS--------SCCEEEEESGGGH
T ss_pred             ccCCCCccccCCCcCCcEE------EeCEEEEEEEECCCCCCCC--------CCCeEEEEHHHHH
Confidence            3333445778899999999      3579999996544333211        2235666665544


No 36 
>d1orfa_ b.47.1.2 (A:) Granzyme A {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.96  E-value=0.19  Score=44.44  Aligned_cols=27  Identities=30%  Similarity=0.220  Sum_probs=20.3

Q ss_pred             CCCCCCCCCccceEEeeccCCCCCceEEEEEec
Q 040739          375 QQTFDLEGDSGSLILMKGENGEKPRPIGIIWGG  407 (594)
Q Consensus       375 g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGG  407 (594)
                      +......||||+.++.      ++.++|+..-|
T Consensus       175 ~~~~~c~gdsG~Pl~~------~~~l~GI~S~g  201 (232)
T d1orfa_         175 GGRDSCNGDSGSPLLC------EGVFRGVTSFG  201 (232)
T ss_dssp             CCCBCCTTCTTCEEEE------TTEEEEEEEEC
T ss_pred             CCcccccccCCCeEEE------cCEEEEEEEEE
Confidence            3445678999999983      57899998533


No 37 
>d1fi8a_ b.47.1.2 (A:) Granzyme B {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=94.88  E-value=0.056  Score=48.04  Aligned_cols=104  Identities=15%  Similarity=0.129  Sum_probs=53.2

Q ss_pred             ccccccccccCCCCCccccccccccccCcceeecccCcccccCCCeEEEEeecccceEEEE----EEEEEEEeC------
Q 040739          289 ADGAFIPFADDFDMSTVTTSVKGLGEIGDVKIVDLQSPISSLIGKQVVKVGRSSGLTTGTV----LAYALEYND------  358 (594)
Q Consensus       289 aD~AIi~va~~~d~s~vs~~I~~lG~IG~vk~vdl~g~~~p~lG~~V~KvGRTTGlT~G~I----tai~V~y~~------  358 (594)
                      -|+|++++.++...+   +.|..   +    .+.. .......|+.+...|..+.......    ....+.+-.      
T Consensus        88 ~diall~l~~~i~~~---~~v~p---i----cl~~-~~~~~~~~~~~~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~c~~  156 (227)
T d1fi8a_          88 NDIMLLKLKSKAKRS---SAVKP---L----NLPR-RNVKVKPGDVCYVAGWGKLGPMGKYSDTLQEVELTVQEDQKCES  156 (227)
T ss_dssp             SCCEEEEESSCCCCC---SSCCC---C----CCCC-TTCCCCTTCEEEEEESCBSSTTCCBCSBCEEEEEEBCCHHHHHH
T ss_pred             chhhhhhccCceeee---eeEEE---E----Eecc-cCcccCCCCEEEEEeeccccCCCCCCceeeEEEEEEEEchhhhh
Confidence            388999998765443   22221   1    0100 1123456788888886553333321    111222211      


Q ss_pred             --CCCeEEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739          359 --EKGICFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTA  409 (594)
Q Consensus       359 --~~G~~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~  409 (594)
                        .........+......+....-.||||++++      .+..++||+.-|..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~c~gdsGgPl~------~~~~l~Gi~S~g~~  203 (227)
T d1fi8a_         157 YLKNYFDKANEICAGDPKIKRASFRGDSGGPLV------CKKVAAGIVSYGQN  203 (227)
T ss_dssp             HTTTTCCTTTEEEESCTTSCCBCCTTCTTSEEE------ETTEEEEEEEEEET
T ss_pred             hhhcccccceeeeeeeccccCCCcCCCcCCEEE------ECCEEEEEEEEcCC
Confidence              1111111123333333445667899999998      35799999976553


No 38 
>d2f91a1 b.47.1.2 (A:16-244) Trypsin(ogen) {Narrow-clawed crayfish (Pontastacus leptodactylus) [TaxId: 6717]}
Probab=94.86  E-value=0.078  Score=47.39  Aligned_cols=31  Identities=23%  Similarity=0.230  Sum_probs=21.3

Q ss_pred             CCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739          376 QTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT  408 (594)
Q Consensus       376 ~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs  408 (594)
                      ..-...||||+.++..  ++..-.++||+..|.
T Consensus       181 ~~~~~~gdsG~Pl~~~--~~~~~~L~Gi~S~g~  211 (237)
T d2f91a1         181 GKDSCQGDSGGPLAAS--DTGSTYLAGIVSWGY  211 (237)
T ss_dssp             CCBCCTTCTTCEEEEC--TTSSCEEEEEEEEES
T ss_pred             ccccccCCCCCeEEEe--cCCeEEEEEEEEeCC
Confidence            3356679999999852  223345999997664


No 39 
>d2bz6h1 b.47.1.2 (H:16-257) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.72  E-value=0.01  Score=53.37  Aligned_cols=33  Identities=21%  Similarity=0.125  Sum_probs=22.7

Q ss_pred             CCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739          374 NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT  408 (594)
Q Consensus       374 ~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs  408 (594)
                      .+..++..||||+.++..  .+..-.++|++.-|.
T Consensus       182 ~~~~~~~~gdsGgPl~~~--~~~~~~lvGi~S~g~  214 (254)
T d2bz6h1         182 DGSKDSCKGDSGGPHATH--YRGTWYLTGIVSWGQ  214 (254)
T ss_dssp             SSSCBCCGGGTTCEEEEE--ETTEEEEEEEEEECS
T ss_pred             CCCcccccCccccceEEc--cCCeEEEEEEEEeCC
Confidence            345688899999999842  122335899996554


No 40 
>d1brup_ b.47.1.2 (P:) Elastase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=94.62  E-value=0.093  Score=46.38  Aligned_cols=40  Identities=23%  Similarity=0.317  Sum_probs=23.5

Q ss_pred             EEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739          368 FLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT  408 (594)
Q Consensus       368 qIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs  408 (594)
                      ++.....+....-.||||+.++..+ .+....++||+.-|.
T Consensus       172 ~~~~~~~~~~~~C~gdsGgPl~~~~-~~~~~~L~Gi~S~g~  211 (241)
T d1brup_         172 MICAGGDGIISSCNGDSGGPLNCQG-ANGQWQVHGIVSFGS  211 (241)
T ss_dssp             EEEECCSSSSBCCTTCTTCEEEEEC-TTSCEEEEEEEEECB
T ss_pred             ceeecCCCCccccCCCcccceEEEc-CCCCEEEEEEEEECC
Confidence            4444443333456799999887431 122347899994433


No 41 
>d2qy0b1 b.47.1.2 (B:447-686) Complement C1R protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.47  E-value=0.086  Score=47.42  Aligned_cols=43  Identities=21%  Similarity=0.380  Sum_probs=27.1

Q ss_pred             EEEEECC-CCCCCCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739          367 DFLVVGE-NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTA  409 (594)
Q Consensus       367 dqIVt~~-~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~  409 (594)
                      +++.+.. .+......||||+.++...+......++|++.-|..
T Consensus       173 ~~~c~~~~~~~~~~~~gdsG~pl~~~~~~~~~~~l~Gi~S~g~~  216 (240)
T d2qy0b1         173 NMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIG  216 (240)
T ss_dssp             TEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSS
T ss_pred             ceEEeccCCccceeeccccccceEEEeCCCCeEEEEEEEEECCC
Confidence            3554432 334567889999999864222233468999876653


No 42 
>d1eq9a_ b.47.1.2 (A:) (alpha,gamma)-chymotrypsin(ogen) {Red fire ant (Solenopsis invicta) [TaxId: 13686]}
Probab=94.35  E-value=0.019  Score=50.72  Aligned_cols=34  Identities=24%  Similarity=0.309  Sum_probs=23.8

Q ss_pred             EEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739          369 LVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT  408 (594)
Q Consensus       369 IVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs  408 (594)
                      +.....+....-.||||+.++      .+..++||+.-|.
T Consensus       163 ~c~~~~~~~~~c~~d~G~pl~------~~~~L~GI~s~~~  196 (222)
T d1eq9a_         163 ICTLTKRGEGACHGDSGGPLV------ANGAQIGIVSFGS  196 (222)
T ss_dssp             EEECCCTTCBCCTTCTTCEEE------ETTEEEEEEEECS
T ss_pred             eEeccCCCCCccccCCcCCEE------EcCEEEEEEEECC
Confidence            333333344567899999999      3578999997664


No 43 
>d1z8ga1 b.47.1.2 (A:163-417) Hepsin, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.29  E-value=0.16  Score=45.84  Aligned_cols=35  Identities=29%  Similarity=0.357  Sum_probs=23.4

Q ss_pred             CCCCCCCCCccceEEeeccCCCCC--ceEEEEEecCC
Q 040739          375 QQTFDLEGDSGSLILMKGENGEKP--RPIGIIWGGTA  409 (594)
Q Consensus       375 g~~FS~~GDSGSlVl~~~~~d~~~--~aVGLlfGGs~  409 (594)
                      +....-.||||+.++.....+..+  .++||+.-|..
T Consensus       182 ~~~~~c~gdsGgPl~~~~~~~~~~~~~l~Gi~S~g~~  218 (255)
T d1z8ga1         182 GGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTG  218 (255)
T ss_dssp             CSCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBSS
T ss_pred             CCcccccCccccceEEecCCCCCCcEEEEEEEEECCC
Confidence            344567899999999543222222  68999977654


No 44 
>d1xx9a_ b.47.1.2 (A:) Coagulation factor XI {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.16  E-value=0.065  Score=47.83  Aligned_cols=49  Identities=20%  Similarity=0.118  Sum_probs=29.9

Q ss_pred             CCCCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739          376 QTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL  435 (594)
Q Consensus       376 ~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL  435 (594)
                      ..-.-.||||+.++..  .+..-.++||+..|...+         .....++|..|...+
T Consensus       180 ~~~~c~gdsG~pl~~~--~~~~~~l~Gi~s~g~~~~---------~~~~p~vft~v~~~~  228 (237)
T d1xx9a_         180 GKDACKGDSGGPLSCK--HNEVWHLVGITSWGEGCA---------QRERPGVYTNVVEYV  228 (237)
T ss_dssp             CCBCCTTCTTCEEEEE--ETTEEEEEEEEEEESSSS---------CTTCCEEEECGGGGH
T ss_pred             CcccccCCccceeEEe--cCCEEEEEEEEEeCCCCC---------CCCCCEEEEEhHHhH
Confidence            3345579999999842  122336899998775422         113346777766554


No 45 
>d1rfna_ b.47.1.2 (A:) Coagulation factor IXa, protease domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.10  E-value=0.1  Score=46.04  Aligned_cols=33  Identities=24%  Similarity=0.172  Sum_probs=23.4

Q ss_pred             CCCCCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739          375 QQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTA  409 (594)
Q Consensus       375 g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~  409 (594)
                      +......||||+.++..  .+....++|++..|..
T Consensus       176 ~~~~~~~gdsGgpl~~~--~~~~~~l~Gi~s~g~~  208 (235)
T d1rfna_         176 GGRDSCQGDSGGPHVTE--VEGTSFLTGIISWGEE  208 (235)
T ss_dssp             CSCBCCTTCTTCEEEEE--SSSCEEEEEEEEEESS
T ss_pred             CCccccCCCCCceeEEe--cCCeEEEEEEEEeCCC
Confidence            34456779999999952  2335569999987664


No 46 
>d1fq3a_ b.47.1.2 (A:) Granzyme B {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.05  E-value=0.016  Score=51.79  Aligned_cols=29  Identities=24%  Similarity=0.347  Sum_probs=22.3

Q ss_pred             CCCCCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739          375 QQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTA  409 (594)
Q Consensus       375 g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~  409 (594)
                      +......||||++++      .+..++|++.-|..
T Consensus       174 ~~~~~~~gdsG~pl~------~~~~l~GI~s~g~~  202 (227)
T d1fq3a_         174 IKKTSFKGDSGGPLV------CNKVAQGIVSYGRN  202 (227)
T ss_dssp             SSCBCCTTCTTCBCB------SSSSCCCEECCCCT
T ss_pred             cccccccCCCCceEE------EeCEEEEEEEEcCC
Confidence            344567799999998      35789999876654


No 47 
>d1ekbb_ b.47.1.2 (B:) Enteropeptidase (enterokinase light chain) {Cow (Bos taurus) [TaxId: 9913]}
Probab=94.04  E-value=0.12  Score=45.77  Aligned_cols=29  Identities=21%  Similarity=0.287  Sum_probs=19.6

Q ss_pred             CCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739          379 DLEGDSGSLILMKGENGEKPRPIGIIWGGTA  409 (594)
Q Consensus       379 S~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~  409 (594)
                      +-.||||+.++..  ++..-.++||..-|..
T Consensus       182 ~c~gdsG~pl~~~--~~~~~~l~Gi~S~g~~  210 (235)
T d1ekbb_         182 SCQGDSGGPLMCQ--ENNRWLLAGVTSFGYQ  210 (235)
T ss_dssp             CCTTCTTCEEEEE--ETTEEEEEEEEEECSS
T ss_pred             cccCCCCCccEEc--cCCEEEEEEEEEecCC
Confidence            4579999999852  1122348999876654


No 48 
>d1fxya_ b.47.1.2 (A:) Coagulation factor Xa-trypsin chimera {Synthetic, based on Homo sapiens sequence}
Probab=93.88  E-value=0.14  Score=45.41  Aligned_cols=30  Identities=20%  Similarity=0.273  Sum_probs=22.2

Q ss_pred             CCCCCCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739          374 NQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTA  409 (594)
Q Consensus       374 ~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~  409 (594)
                      .+....-.||||+.++      -+.+++||+.-|..
T Consensus       171 ~~~~~~~~gd~G~Pl~------~~~~l~Gi~s~g~~  200 (228)
T d1fxya_         171 EGGKDSCQGDSGGPVV------CNGQLQGVVSWGDG  200 (228)
T ss_dssp             TCSCBCCTTCTTCEEE------ETTEEEEEEEECSS
T ss_pred             CCCcccccCccCccEE------EeCEEEEEEEECCC
Confidence            3344567799999999      35789999866553


No 49 
>d1hj9a_ b.47.1.2 (A:) Trypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}
Probab=93.76  E-value=0.19  Score=44.14  Aligned_cols=29  Identities=24%  Similarity=0.320  Sum_probs=21.5

Q ss_pred             CCCCCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739          375 QQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTA  409 (594)
Q Consensus       375 g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~  409 (594)
                      +......||||+.++      .+.+++|++.-|..
T Consensus       168 ~~~~~~~gd~g~pl~------~~~~L~Gi~S~g~~  196 (223)
T d1hj9a_         168 GKGDSCQGDSGGPVV------CSGKLQGIVSWGSG  196 (223)
T ss_dssp             CCCCCCTTCTTCEEE------ETTEEEEEEEECSC
T ss_pred             CCcccccCCCCceeE------EeCEEEEEEEEcCC
Confidence            444567899999998      35689999865553


No 50 
>d2fpza1 b.47.1.2 (A:16-244) beta-Tryptase {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.76  E-value=0.065  Score=48.12  Aligned_cols=32  Identities=22%  Similarity=0.256  Sum_probs=22.4

Q ss_pred             CCCCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739          376 QTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTA  409 (594)
Q Consensus       376 ~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~  409 (594)
                      ......||||+.++..  .+....++|++.-|..
T Consensus       186 ~~~~~~gdsGgpl~~~--~~~~~~L~Gi~s~~~~  217 (243)
T d2fpza1         186 RRDSCQGDSGGPLVCK--VNGTWLQAGVVSWGEG  217 (243)
T ss_dssp             SSBCCTTCTTCEEEEE--ETTEEEEEEEEEECSS
T ss_pred             CCCCccCCCCCeEEEe--eCCEEEEEEEEEECCC
Confidence            3356679999999852  1234568999987754


No 51 
>d1mzaa_ b.47.1.2 (A:) Granzyme K {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.71  E-value=0.35  Score=42.89  Aligned_cols=27  Identities=26%  Similarity=0.326  Sum_probs=20.9

Q ss_pred             CCCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739          377 TFDLEGDSGSLILMKGENGEKPRPIGIIWGGTA  409 (594)
Q Consensus       377 ~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~  409 (594)
                      .-.-.||||+.++      .++.++|++..|..
T Consensus       183 ~~~C~gDsGgPl~------~~~~l~Gi~S~g~~  209 (240)
T d1mzaa_         183 KDSCKGDAGGPLI------CKGVFHAIVSGGHE  209 (240)
T ss_dssp             CCCCTTCTTCEEE------ETTEEEEEECSSCC
T ss_pred             ccCccCCCCCeEE------ECCEEEEEEEeCCC
Confidence            3445699999999      35789999987753


No 52 
>d2hlca_ b.47.1.2 (A:) HL collagenase {Common cattle grub (Hypoderma lineatum) [TaxId: 7389]}
Probab=93.47  E-value=0.16  Score=45.07  Aligned_cols=37  Identities=19%  Similarity=0.187  Sum_probs=24.5

Q ss_pred             EEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739          368 FLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT  408 (594)
Q Consensus       368 qIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs  408 (594)
                      ++............||||+.++.    +.+..++||+..+.
T Consensus       164 ~~~~~~~~~~~~~~gdsGgp~~~----~~~~~l~Gi~S~~~  200 (230)
T d2hlca_         164 TICGDTSDGKSPCFGDSGGPFVL----SDKNLLIGVVSFVS  200 (230)
T ss_dssp             EEEECCTTSCBCCTTCTTCEEEE----GGGTEEEEEEEECC
T ss_pred             ceEeccccCccccccccCCCeEE----CCCeEEEEEEEEeC
Confidence            34444333445678999999984    34567999986444


No 53 
>d1azza_ b.47.1.2 (A:) Crab collagenase {Atlantic sand fiddler crab (Uca pugilator) [TaxId: 6772]}
Probab=93.38  E-value=0.06  Score=47.94  Aligned_cols=25  Identities=28%  Similarity=0.196  Sum_probs=19.5

Q ss_pred             CCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739          378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGT  408 (594)
Q Consensus       378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs  408 (594)
                      -+-.||||+.++      .+..++||+.-|.
T Consensus       172 ~~c~gdsG~Pl~------~~~~l~Gi~S~g~  196 (226)
T d1azza_         172 GTCNGDSGGPLN------YNGLTYGITSFGA  196 (226)
T ss_dssp             BCCTTCTTCEEE------ETTEEEEEEEEEE
T ss_pred             ccccCCcCCCEE------EcCEEEEEEEEeC
Confidence            456799999998      4578999985444


No 54 
>d1pytd_ b.47.1.2 (D:) (alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}
Probab=93.37  E-value=0.13  Score=46.36  Aligned_cols=57  Identities=16%  Similarity=0.121  Sum_probs=31.7

Q ss_pred             EEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEE-ecCCCCCccccccCCCCCcceEeechHHHH
Q 040739          369 LVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIW-GGTANRGRLKLKIGQPPENWTSGVDLGRLL  435 (594)
Q Consensus       369 IVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlf-GGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL  435 (594)
                      +.+...+....-.||||+.++..  ++..-.++||+. |-...+++        .....+|+.|...+
T Consensus       185 ~c~~~~~~~~~c~gd~G~Pl~~~--~~~~~~L~Gi~S~~~~~~c~~--------~~~p~vyt~v~~y~  242 (251)
T d1pytd_         185 VCAGGDGVISACNGDSGGPLNCQ--ADGQWDVRGIVSFGSGLSCNT--------FKKPTVFTRVSAYI  242 (251)
T ss_dssp             EEECCSCSSCCCCSCTTCEEEEE--SSSSEEEEEEEEECCSSCTTB--------TTBCEEEEEGGGGH
T ss_pred             EEeccCCCCccccCCCCCceEEe--eCCEEEEEEEEEECCCCCCCC--------CCCCeEEEEHHHhH
Confidence            44444344456789999999852  223346899984 43333321        12335666665443


No 55 
>d1autc_ b.47.1.2 (C:) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.32  E-value=0.18  Score=44.58  Aligned_cols=49  Identities=20%  Similarity=0.183  Sum_probs=29.6

Q ss_pred             CCCCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739          376 QTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL  435 (594)
Q Consensus       376 ~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL  435 (594)
                      ......||||+.++..  .+....++|+...|.... .        +...++|+.|...+
T Consensus       183 ~~~~~~gd~G~pl~~~--~~~~~~l~Gi~s~g~~c~-~--------~~~p~vftrv~~y~  231 (240)
T d1autc_         183 RQDACEGDSGGPMVAS--FHGTWFLVGLVSWGEGCG-L--------LHNYGVYTKVSRYL  231 (240)
T ss_dssp             CCBCCTTCTTCEEEEE--ETTEEEEEEEEEECSSSS-C--------TTCCEEEECGGGTH
T ss_pred             cCCCcCCccCceeEEc--CCCCEEEEEEEEeCCCCC-C--------CCCCeEEEEHHHHH
Confidence            3456789999999842  122345899987765321 1        12335677765544


No 56 
>d1m9ua_ b.47.1.2 (A:) Elastase {Worm (Eisenia fetida) [TaxId: 6396]}
Probab=93.29  E-value=0.22  Score=43.87  Aligned_cols=30  Identities=23%  Similarity=0.184  Sum_probs=22.6

Q ss_pred             CCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739          376 QTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT  408 (594)
Q Consensus       376 ~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs  408 (594)
                      ...+..||||+.++..   +.+.+++|++.+..
T Consensus       183 ~~~~~~g~sGgpl~~~---~~~~~l~Gi~s~~~  212 (241)
T d1m9ua_         183 NTGACNGDSGGPLNCP---DGGTRVVGVTSWVV  212 (241)
T ss_dssp             CCBCCTTCTTCEEEEE---SSSEEEEEEEEECC
T ss_pred             CcCcccCCCCcceEEe---cCCEEEEEEEEEEE
Confidence            4467889999998853   45667999997654


No 57 
>d1gvkb_ b.47.1.2 (B:) Elastase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=93.27  E-value=0.15  Score=44.93  Aligned_cols=36  Identities=17%  Similarity=0.119  Sum_probs=22.7

Q ss_pred             EEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEe
Q 040739          369 LVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWG  406 (594)
Q Consensus       369 IVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfG  406 (594)
                      +.+...+....-.||||+.++..  .+.+..++||+.-
T Consensus       173 ~c~~~~~~~~~c~gDsG~pl~~~--~~~~~~lvGI~S~  208 (240)
T d1gvkb_         173 VCAGGDGVRSGCQGDSGGPLHCL--VNGQYAVHGVTSF  208 (240)
T ss_dssp             EEECCSSSCBCCTTCTTCEEEEE--ETTEEEEEEEEEE
T ss_pred             EEecCCCCCccccCccccceEEE--ECCEEEEEEEEEE
Confidence            33433333345579999998853  1335679999943


No 58 
>d1eaxa_ b.47.1.2 (A:) Matriptase MTSP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.20  E-value=0.43  Score=42.61  Aligned_cols=30  Identities=20%  Similarity=0.207  Sum_probs=20.2

Q ss_pred             CCCCCCCccceEEeeccCCCCC--ceEEEEEecCC
Q 040739          377 TFDLEGDSGSLILMKGENGEKP--RPIGIIWGGTA  409 (594)
Q Consensus       377 ~FS~~GDSGSlVl~~~~~d~~~--~aVGLlfGGs~  409 (594)
                      .-.-.||||+.++..   +.++  .++||+.-|..
T Consensus       184 ~~~c~gd~G~pl~~~---~~~g~~~L~Gi~s~~~~  215 (241)
T d1eaxa_         184 VDSCQGDSGGPLSSV---EADGRIFQAGVVSWGDG  215 (241)
T ss_dssp             SBCCTTCTTCEEEEE---CTTSCEEEEEEEEECSS
T ss_pred             cccccCcccceeEEE---cCCCeEEEEEEEEECCC
Confidence            345679999999853   2233  47899866553


No 59 
>d1si5h_ b.47.1.2 (H:) Hepatocyte growth factor, HGF {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.18  E-value=0.45  Score=42.39  Aligned_cols=32  Identities=22%  Similarity=0.310  Sum_probs=22.2

Q ss_pred             CCCCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739          376 QTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTA  409 (594)
Q Consensus       376 ~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~  409 (594)
                      ......||||+.++..  .+....++|++..|..
T Consensus       171 ~~~~c~gdsG~pl~~~--~~~~~~l~Gi~s~g~~  202 (234)
T d1si5h_         171 GSGPCEGDYGGPLVCE--QHKMRMVLGVIVPGRG  202 (234)
T ss_dssp             CCBCCTTCTTCEEEEE--CSSSEEEEEEECSCSC
T ss_pred             CCCCCcCccccceEEe--cCCeEEEEEEEEeCCC
Confidence            3456779999999952  2234458999987653


No 60 
>d1t32a1 b.47.1.2 (A:16-244) Cathepsin G {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.14  E-value=0.12  Score=45.59  Aligned_cols=29  Identities=28%  Similarity=0.416  Sum_probs=21.3

Q ss_pred             CCCCCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739          375 QQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTA  409 (594)
Q Consensus       375 g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~  409 (594)
                      +..-.-.||||++++      .++.++||+.-|..
T Consensus       172 ~~~~~c~gdsGgPl~------~~~~l~Gi~S~g~~  200 (224)
T d1t32a1         172 ERKAAFKGDSGGPLL------CNNVAHGIVSYGKS  200 (224)
T ss_dssp             SSCBCCTTCTTCEEE------ETTEEEEEEEECCT
T ss_pred             ccccccccCcCCeEE------EcCEEEEEEEEcCC
Confidence            334456699999998      35699999876654


No 61 
>d2p3ub1 b.47.1.2 (B:16-243) Coagulation factor Xa, protease domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.04  E-value=0.043  Score=48.40  Aligned_cols=50  Identities=18%  Similarity=0.153  Sum_probs=30.1

Q ss_pred             CCCCCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739          375 QQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL  435 (594)
Q Consensus       375 g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL  435 (594)
                      +......||||+.++..  .+....++|+...|....         .+....+|+.|..-+
T Consensus       176 ~~~~~~~gdsGgpl~~~--~~~~~~L~Gv~s~g~~c~---------~~~~p~vyt~v~~y~  225 (233)
T d2p3ub1         176 KQEDACQGDSGGPHVTR--FKDTYFVTGIVSWGEGCA---------RKGKYGIYTKVTAFL  225 (233)
T ss_dssp             SSCBCCTTTTTCEEEEE--ETTEEEEEEEEEECSSSS---------CTTCCEEEEEGGGGH
T ss_pred             ccCCCcCCCcccccEEe--cCCeEEEEEEEEECCCCC---------CCCCCEEEEEHHHHH
Confidence            34567789999999952  122234899997665422         112335666665544


No 62 
>d1ep5a_ b.47.1.3 (A:) Viral capsid protein {Venezuelan equine encephalitis virus [TaxId: 11036]}
Probab=92.96  E-value=0.053  Score=48.01  Aligned_cols=29  Identities=34%  Similarity=0.603  Sum_probs=26.5

Q ss_pred             CCCCCCccceEEeeccCCCCCceEEEEEecCCCC
Q 040739          378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANR  411 (594)
Q Consensus       378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~  411 (594)
                      -..+||||-+++     |+++++|||+.||....
T Consensus       101 ~g~~GDSGRpi~-----DN~GkVVaIVLGG~neg  129 (156)
T d1ep5a_         101 VGAKGDSGRPIL-----DNQGRVVAIVLGGVNEG  129 (156)
T ss_dssp             CCCTTCTTCEEE-----CTTSCEEEEEEEEEECS
T ss_pred             CCCCCCCCCccC-----cCCCcEEEEEecCCCCC
Confidence            588999999999     99999999999998764


No 63 
>d1wyka_ b.47.1.3 (A:) Viral capsid protein {Sindbis virus [TaxId: 11034]}
Probab=92.86  E-value=0.048  Score=48.02  Aligned_cols=29  Identities=31%  Similarity=0.534  Sum_probs=26.4

Q ss_pred             CCCCCCccceEEeeccCCCCCceEEEEEecCCCC
Q 040739          378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANR  411 (594)
Q Consensus       378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~  411 (594)
                      -..+||||-+++     |+++++|||+.||....
T Consensus        97 ~g~~GDSGRpi~-----DN~GrVVaIVLGGaneG  125 (152)
T d1wyka_          97 VGGRGDSGRPIM-----DNSGRVVAIVLGGADEG  125 (152)
T ss_dssp             TCCTTCTTCEEE-----CTTSCEEEEEEEEEEET
T ss_pred             CCCCCCCCCccC-----cCCCcEEEEEecCCCCC
Confidence            588999999999     99999999999998654


No 64 
>g1gg6.1 b.47.1.2 (A:,B:,C:) (alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}
Probab=92.86  E-value=0.072  Score=47.79  Aligned_cols=47  Identities=19%  Similarity=0.176  Sum_probs=27.7

Q ss_pred             CCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739          378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL  435 (594)
Q Consensus       378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL  435 (594)
                      ..-.||||+.++..  .+..-.++||+.-|...+         ....-.+|+.|...+
T Consensus       182 ~~c~gd~G~pl~~~--~~~~~~l~Gi~S~~~~~~---------~~~~p~v~t~v~~~~  228 (238)
T g1gg6.1         182 SSCMGDSGGPLVCK--KNGAWTLVGIVSWGSSTC---------STSTPGVYARVTALV  228 (238)
T ss_dssp             BCCTTCTTCEEEEE--ETTEEEEEEEEEECCTTC---------CTTSEEEEEEGGGTH
T ss_pred             cccCCCCCCeeEEe--eCCeEEEEEEEEeCCCCC---------CCCCCEEEEEHHHHH
Confidence            45679999999852  122335899986555433         112335666665543


No 65 
>d1fona_ b.47.1.2 (A:) Procarboxypeptidase A-S6 subunit III (zymogen E) {Cow (Bos taurus) [TaxId: 9913]}
Probab=92.62  E-value=0.11  Score=46.33  Aligned_cols=50  Identities=14%  Similarity=-0.009  Sum_probs=29.1

Q ss_pred             CCCCCCCCccceEEeeccCCCCCceEEEEEecCC-CCCccccccCCCCCcceEeechHHH
Q 040739          376 QTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTA-NRGRLKLKIGQPPENWTSGVDLGRL  434 (594)
Q Consensus       376 ~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~-~~g~~~~~~~~~p~~~Tl~~pI~~V  434 (594)
                      ......||||+.++.. ..+....++||+..+.. .+++        +...++|+.|..-
T Consensus       171 ~~~~~~gdsGgpl~~~-~~~~~~~L~Gi~s~~~~~~c~~--------~~~p~vyt~V~~y  221 (232)
T d1fona_         171 TRSGCNGDSGGPLNCP-AADGSWQVHGVTSFVSAFGCNT--------IKKPTVFTRVSAF  221 (232)
T ss_dssp             SSCSTTSCTTCEEEEE-CSSSCEEEEEEEEECCTTCSSB--------TTBCEEEEEGGGS
T ss_pred             cccccccCCCCceEEE-ccCCCEEEEEEEEEcCCCCCCC--------CCCCEEEEEHHHH
Confidence            3356779999998743 11223468999975543 2321        1233567666553


No 66 
>g1h8d.1 b.47.1.2 (L:,H:) Thrombin {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.51  E-value=0.095  Score=48.70  Aligned_cols=32  Identities=31%  Similarity=0.354  Sum_probs=21.3

Q ss_pred             CCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739          377 TFDLEGDSGSLILMKGENGEKPRPIGIIWGGT  408 (594)
Q Consensus       377 ~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs  408 (594)
                      ...-.||||++++..+..+..-.++||+..|.
T Consensus       220 ~~~C~gdsGgPL~~~~~~~~~~~LvGv~S~g~  251 (289)
T g1h8d.1         220 GDACEGDSGGPFVMKSPFNNRWYQMGIVSWGE  251 (289)
T ss_dssp             CBCCTTCTTCEEEEECTTTCCEEEEEEEEECS
T ss_pred             ccccCCCccCeeEEEeccCCEEEEEEEEEECC
Confidence            45567999999885422233335899987654


No 67 
>d1rjxb_ b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.50  E-value=0.31  Score=43.23  Aligned_cols=31  Identities=26%  Similarity=0.210  Sum_probs=20.9

Q ss_pred             CCCCCCCCccceEEeeccCCCCCceEEEEEecC
Q 040739          376 QTFDLEGDSGSLILMKGENGEKPRPIGIIWGGT  408 (594)
Q Consensus       376 ~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs  408 (594)
                      ......||||+.++..  .+..-.++|++.-|.
T Consensus       189 ~~~~c~gdsG~pl~~~--~~~~~~l~Gi~S~~~  219 (247)
T d1rjxb_         189 GTDSCQGDSGGPLVCF--EKDKYILQGVTSWGL  219 (247)
T ss_dssp             CCCBCCSCTTCEEEEE--CSSSEEEEEEECTTS
T ss_pred             CcccccCCccceEEEe--eCCEEEEEEEEEeCC
Confidence            4456779999999842  122335899997654


No 68 
>d1vcpa_ b.47.1.3 (A:) Viral capsid protein {Semliki forest virus [TaxId: 11033]}
Probab=92.35  E-value=0.073  Score=46.81  Aligned_cols=29  Identities=34%  Similarity=0.549  Sum_probs=26.5

Q ss_pred             CCCCCCccceEEeeccCCCCCceEEEEEecCCCC
Q 040739          378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTANR  411 (594)
Q Consensus       378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~  411 (594)
                      ...+||||-+++     |+++++|+|+.||....
T Consensus        95 ~g~~GDSGRpi~-----DN~GkVVaIVLGGa~eG  123 (149)
T d1vcpa_          95 AGKPGDSGRPIF-----DNKGRVVAIVLGGANEG  123 (149)
T ss_dssp             SCCTTCTTCEEE-----CTTSCEEEEEEEEEECS
T ss_pred             cCCCCCCCCccC-----cCCCCEEEEEecCCCCC
Confidence            688999999999     99999999999998764


No 69 
>g1rtf.1 b.47.1.2 (A:,B:) Two-chain tissue plasminogen activator (TC)-T-PA {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.94  E-value=0.19  Score=44.98  Aligned_cols=48  Identities=21%  Similarity=0.175  Sum_probs=30.1

Q ss_pred             CCCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739          377 TFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL  435 (594)
Q Consensus       377 ~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL  435 (594)
                      ...-.||||+.++..  .+..-.++||+..+.... .        .+...+|..|..-+
T Consensus       204 ~~~C~gdsGgplv~~--~~~~~~l~Gi~s~~~~c~-~--------~~~p~vytrv~~~~  251 (260)
T g1rtf.1         204 HDACQGDSGGPLVCL--NDGRMTLVGIISWGLGCG-Q--------KDVPGVYTKVTNYL  251 (260)
T ss_dssp             CBCCTTCTTCEEEEE--ETTEEEEEEEEEECSSSS-C--------TTCCEEEEEGGGGH
T ss_pred             CcCCCCCccCEEEEE--ECCEEEEEEEEEeCCCCC-C--------CCCCEEEEEHHHHH
Confidence            345689999999852  122346999998765421 1        13346777766544


No 70 
>d3rp2a_ b.47.1.2 (A:) Chymase II (mast cell proteinase II) {Rat (Rattus rattus) [TaxId: 10117]}
Probab=91.59  E-value=0.58  Score=41.22  Aligned_cols=47  Identities=17%  Similarity=0.138  Sum_probs=30.4

Q ss_pred             CCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739          372 GENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL  435 (594)
Q Consensus       372 ~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL  435 (594)
                      ...+....-.||||+.++      .++.++|++.-|....           ....+|..|..-+
T Consensus       170 ~~~~~~~~c~~d~G~Pl~------~~~~l~Gi~S~g~~~~-----------~~p~vyt~v~~~~  216 (224)
T d3rp2a_         170 SPTTLRAAFMGDSGGPLL------CAGVAHGIVSYGHPDA-----------KPPAIFTRVSTYV  216 (224)
T ss_dssp             CTTSCCBCCTTTTTCEEE------ETTEEEEEEEECCTTC-----------CSCEEEEEHHHHH
T ss_pred             cCcccccCcCCCcCCeEE------EcCEEEEEEEECCCCC-----------CCCeEEEEHHHHH
Confidence            333444566899999999      3578999986555332           1236677766543


No 71 
>g1gj7.1 b.47.1.2 (A:,B:) Urokinase-type plasminogen activator (LMW U-PA), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.53  E-value=0.4  Score=42.70  Aligned_cols=33  Identities=24%  Similarity=0.256  Sum_probs=22.6

Q ss_pred             CCCCCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739          375 QQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTA  409 (594)
Q Consensus       375 g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~  409 (594)
                      +......||||++++..  .+....++||..-|..
T Consensus       199 ~~~~~c~gDsGgPl~~~--~~~~~~lvGv~S~~~~  231 (256)
T g1gj7.1         199 WKTDSCQGDSGGPLVCS--LQGRMTLTGIVSWGRG  231 (256)
T ss_dssp             SCCBCCTTSTTCEEEEE--ETTEEEEEEEEEECSS
T ss_pred             CCCCCCCCCcCCeEEEE--eCCEEEEEEEEEECCC
Confidence            34456689999999852  1234569999976654


No 72 
>d1elta_ b.47.1.2 (A:) Elastase {Salmon (Salmo salar) [TaxId: 8030]}
Probab=91.48  E-value=0.15  Score=44.93  Aligned_cols=28  Identities=18%  Similarity=0.017  Sum_probs=19.5

Q ss_pred             CCCCCCccceEEeeccCCCCCceEEEEEec
Q 040739          378 FDLEGDSGSLILMKGENGEKPRPIGIIWGG  407 (594)
Q Consensus       378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGG  407 (594)
                      -...||||+.++..  .+....++|++..+
T Consensus       181 ~~c~gdsGgpl~~~--~~~~~~l~GI~s~~  208 (236)
T d1elta_         181 SGCNGDSGGPLNCQ--VNGSYYVHGVTSFV  208 (236)
T ss_dssp             BCCTTCTTCEEEEE--ETTEEEEEEEEEEC
T ss_pred             cccccccccceEEE--ECCeEEEEEEEEEe
Confidence            45679999998852  13345689999543


No 73 
>d1os8a_ b.47.1.1 (A:) Trypsin {Streptomyces griseus, strain k1 [TaxId: 1911]}
Probab=90.26  E-value=0.57  Score=41.44  Aligned_cols=46  Identities=24%  Similarity=0.324  Sum_probs=27.3

Q ss_pred             CCCCccceEEeeccCCCCCceEEEEEecCCCCCccccccCCCCCcceEeechHHHH
Q 040739          380 LEGDSGSLILMKGENGEKPRPIGIIWGGTANRGRLKLKIGQPPENWTSGVDLGRLL  435 (594)
Q Consensus       380 ~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~~g~~~~~~~~~p~~~Tl~~pI~~VL  435 (594)
                      -.||||+.++.. ..+..-.++||..-|...+ +        +...++|..|..-+
T Consensus       168 c~~~~G~pl~~~-~~~~~~~L~Gi~s~~~~c~-~--------~~~p~vft~V~~y~  213 (223)
T d1os8a_         168 CQGDSGGPMFRK-DNADEWIQVGIVSWGYGCA-R--------PGYPGVYTEVSTFA  213 (223)
T ss_dssp             CTTCTTCEEEEE-CTTSCEEEEEEEEECSSSS-C--------TTCCEEEEEHHHHH
T ss_pred             cccccccceEEe-cCCCeEEEEEEEEeCCCCC-C--------CCCCEEEEEHHHHH
Confidence            459999998742 1112224899987665321 1        13346788776654


No 74 
>d1cqqa_ b.47.1.4 (A:) 3C cysteine protease (picornain 3C) {Human rhinovirus 2 [TaxId: 12130]}
Probab=90.19  E-value=0.38  Score=43.45  Aligned_cols=27  Identities=22%  Similarity=0.373  Sum_probs=22.7

Q ss_pred             CCCCCCccceEEeeccCCCCCceEEEEEecCCC
Q 040739          378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTAN  410 (594)
Q Consensus       378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~  410 (594)
                      -+.+|++|++++      ..+++|||+.||++.
T Consensus       141 ~t~~g~cg~~~~------~~~~i~G~h~~g~~~  167 (180)
T d1cqqa_         141 PTKSGYCGGVLY------KIGQVLGIHVGGNGR  167 (180)
T ss_dssp             CCCTTCTTCEEE------ETTEEEEEEEEECSS
T ss_pred             cCCCcccCCeEE------ECCCEEEEEeccCCC
Confidence            377899999999      457899999999743


No 75 
>d1elva1 b.47.1.2 (A:410-668) Complement C1S protease, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.07  E-value=3  Score=37.05  Aligned_cols=33  Identities=24%  Similarity=0.291  Sum_probs=20.8

Q ss_pred             CCCCCCCCccceEEeeccCC-CCCceEEEEEecC
Q 040739          376 QTFDLEGDSGSLILMKGENG-EKPRPIGIIWGGT  408 (594)
Q Consensus       376 ~~FS~~GDSGSlVl~~~~~d-~~~~aVGLlfGGs  408 (594)
                      ....-.||||+.++....+. ....++||..-|.
T Consensus       200 ~~~~c~gDsGgPl~~~~~~~~~~~~l~Gi~S~~~  233 (259)
T d1elva1         200 GMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGP  233 (259)
T ss_dssp             TCBCCTTCTTCEEEEECSSCTTCEEEEEEEEECS
T ss_pred             CCccCCCCcCCeEEEEecCCCcEEEEEEEEEeCC
Confidence            34566799999998542211 1235899986444


No 76 
>d2h6ma1 b.47.1.4 (A:1-212) 3C cysteine protease (picornain 3C) {Human hepatitis A virus [TaxId: 208726]}
Probab=80.25  E-value=3.4  Score=37.32  Aligned_cols=31  Identities=19%  Similarity=0.260  Sum_probs=23.5

Q ss_pred             CCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739          378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTA  409 (594)
Q Consensus       378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~  409 (594)
                      -+..||-||+++..+. ...+.++|||.||++
T Consensus       166 ~T~~G~CGsplv~~~~-~~~~kIiGiHvaG~g  196 (212)
T d2h6ma1         166 EGLPGMCGGALVSSNQ-SIQNAILGIHVAGGN  196 (212)
T ss_dssp             CCCTTCTTCEEEESCG-GGTTCEEEEEEEEET
T ss_pred             CCCCcCcCCeEEEcCC-CCCceEEEEEcCCCC
Confidence            3788999999995321 134679999999974


No 77 
>d1l1na_ b.47.1.4 (A:) 3C cysteine protease (picornain 3C) {Human poliovirus 1 Mahoney [TaxId: 12081]}
Probab=73.55  E-value=4.9  Score=36.09  Aligned_cols=27  Identities=26%  Similarity=0.407  Sum_probs=22.7

Q ss_pred             CCCCCCccceEEeeccCCCCCceEEEEEecCCC
Q 040739          378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTAN  410 (594)
Q Consensus       378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~~  410 (594)
                      -+..|+-||+++      ..++++|||.||++.
T Consensus       141 ~t~~G~CG~~l~------~~~~I~GiH~ag~g~  167 (180)
T d1l1na_         141 PTRAGQCGGVIT------CTGKVIGMHVGGNGS  167 (180)
T ss_dssp             CCCTTCTTCEEE------ETTEEEEEEEEEETT
T ss_pred             CCCCcccCCEEE------eCCCEEEEEeCCCCC
Confidence            377899999999      457899999999753


No 78 
>d1mbma_ b.47.1.3 (A:) NSP4 proteinase {Equine arteritis virus, EAV [TaxId: 11047]}
Probab=73.06  E-value=0.57  Score=42.82  Aligned_cols=26  Identities=27%  Similarity=0.525  Sum_probs=21.7

Q ss_pred             CCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739          378 FDLEGDSGSLILMKGENGEKPRPIGIIWGGTA  409 (594)
Q Consensus       378 FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~  409 (594)
                      |+..|||||+|+     +..+ +||++.|.+.
T Consensus       108 fT~cGDSGSPVi-----~~d~-LvGVHTGSNk  133 (198)
T d1mbma_         108 WTTSGDSGSAVV-----QGDA-VVGVHTGSNT  133 (198)
T ss_dssp             CCCGGGTTCEEE-----ETTE-EEEEEEEEEG
T ss_pred             EccCCCCCCcee-----cCCc-eEEEEeCCCC
Confidence            899999999999     3333 8999999764


No 79 
>d2hrva_ b.47.1.4 (A:) 2A cysteine proteinase {Human rhinovirus 2 [TaxId: 12130]}
Probab=60.25  E-value=7  Score=33.96  Aligned_cols=37  Identities=27%  Similarity=0.286  Sum_probs=27.9

Q ss_pred             EEEEEEEEECCCCCCCCCCCCccceEEeeccCCCCCceEEEEEecCC
Q 040739          363 CFLTDFLVVGENQQTFDLEGDSGSLILMKGENGEKPRPIGIIWGGTA  409 (594)
Q Consensus       363 ~~f~dqIVt~~~g~~FS~~GDSGSlVl~~~~~d~~~~aVGLlfGGs~  409 (594)
                      .+-.+.++..-    |++|||=|.++.      -.--+|||+.+|..
T Consensus        89 ryQ~~vllg~G----~~epGDCGGiLr------C~HGviGivTaGG~  125 (139)
T d2hrva_          89 HIQYNLLIGEG----PCEPGDCGGKLL------CKHGVIGIVTAGGD  125 (139)
T ss_dssp             EEEEEEEEEEC----CCCTTCTTCEEE------ETTEEEEEEEEECS
T ss_pred             HhhcceeEeec----CCCCCCCceEEE------ecCCCEEEEEcCCC
Confidence            34455555444    899999999998      45669999998874


No 80 
>d1rrka1 b.47.1.2 (A:453-739) Factor B {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.42  E-value=6.4  Score=35.94  Aligned_cols=24  Identities=25%  Similarity=0.448  Sum_probs=16.2

Q ss_pred             CCCccceEEeeccCCCCCceEEEEEe
Q 040739          381 EGDSGSLILMKGENGEKPRPIGIIWG  406 (594)
Q Consensus       381 ~GDSGSlVl~~~~~d~~~~aVGLlfG  406 (594)
                      .||||++++..  .+..-.++||+.-
T Consensus       219 ~GDSGgPL~~~--~~~~~~lvGI~S~  242 (287)
T d1rrka1         219 RGDSGGPLIVH--KRSRFIQVGVISW  242 (287)
T ss_dssp             GGGTTCEEEEE--ETTEEEEEEEEEE
T ss_pred             CCCccCCeEEe--cCCeEEEEEEEEe
Confidence            59999999852  1122358999853


No 81 
>d2fp7b1 b.47.1.3 (B:19-170) NS3 protease {West nile virus [TaxId: 11082]}
Probab=31.25  E-value=7.4  Score=34.31  Aligned_cols=19  Identities=37%  Similarity=0.564  Sum_probs=17.5

Q ss_pred             CCCccceEEeeccCCCCCceEEEE
Q 040739          381 EGDSGSLILMKGENGEKPRPIGII  404 (594)
Q Consensus       381 ~GDSGSlVl~~~~~d~~~~aVGLl  404 (594)
                      +|-|||+|+     +.++++|||+
T Consensus       114 ~GtSGSPI~-----n~~G~vVGLY  132 (152)
T d2fp7b1         114 TGTSGSPIV-----DKNGDVIGLY  132 (152)
T ss_dssp             GGGTTCEEE-----CTTSCEEEES
T ss_pred             CCCCCCceE-----ccCCCEEEEe
Confidence            599999999     8999999996


No 82 
>d2fomb1 b.47.1.3 (B:18-167) NS3 protease {Dengue virus type 2 [TaxId: 11060]}
Probab=25.34  E-value=13  Score=32.56  Aligned_cols=20  Identities=35%  Similarity=0.569  Sum_probs=18.2

Q ss_pred             CCCCccceEEeeccCCCCCceEEEE
Q 040739          380 LEGDSGSLILMKGENGEKPRPIGII  404 (594)
Q Consensus       380 ~~GDSGSlVl~~~~~d~~~~aVGLl  404 (594)
                      -+|-|||+|+     |.++++|||+
T Consensus       114 p~GtSGSPIi-----n~~G~vVGLY  133 (150)
T d2fomb1         114 SPGTSGSPIV-----DKKGKVVGLY  133 (150)
T ss_dssp             CGGGTTCEEE-----CTTSCEEEET
T ss_pred             CCCCCCCceE-----CCCCCEEEEe
Confidence            5699999999     9999999995


Done!