Query 040740
Match_columns 217
No_of_seqs 169 out of 1203
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 18:20:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040740.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040740hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 2.7E-42 9.3E-47 313.0 20.0 182 30-217 3-188 (439)
2 2bgh_A Vinorine synthase; VS, 100.0 1.2E-41 4.1E-46 307.2 20.7 184 34-217 3-190 (421)
3 2e1v_A Acyl transferase; BAHD 100.0 2E-38 6.9E-43 288.4 16.5 179 30-209 1-193 (454)
4 2xr7_A Malonyltransferase; xen 100.0 1.4E-37 4.7E-42 282.7 15.7 172 36-209 2-188 (453)
5 2rkv_A Trichothecene 3-O-acety 100.0 3.4E-29 1.2E-33 227.0 15.9 152 57-210 5-179 (451)
6 1q9j_A PAPA5, polyketide synth 98.0 9.2E-05 3.1E-09 64.7 13.7 132 55-207 6-144 (422)
7 4hvm_A Tlmii; PSI-biology, mid 97.3 0.0019 6.5E-08 57.9 11.7 137 55-210 12-165 (493)
8 1l5a_A Amide synthase, VIBH; n 97.2 0.0077 2.6E-07 52.7 13.8 117 71-207 23-146 (436)
9 2jgp_A Tyrocidine synthetase 3 97.1 0.0069 2.3E-07 54.5 12.9 137 55-210 95-245 (520)
10 2xhg_A Tyrocidine synthetase A 95.9 0.2 7E-06 43.8 14.2 138 55-208 16-168 (466)
11 2vsq_A Surfactin synthetase su 95.4 0.074 2.5E-06 53.6 10.4 121 71-208 37-168 (1304)
12 3cla_A Type III chloramphenico 85.7 0.61 2.1E-05 37.6 3.6 45 164-208 164-210 (213)
13 2i9d_A Chloramphenicol acetylt 85.0 0.68 2.3E-05 37.5 3.6 28 179-206 189-216 (217)
14 1q23_A Chloramphenicol acetylt 84.7 0.72 2.5E-05 37.3 3.6 44 164-207 168-213 (219)
15 3b8k_A PDCE2;, dihydrolipoylly 84.4 0.76 2.6E-05 37.7 3.6 30 179-208 204-233 (239)
16 3rqc_A Probable lipoamide acyl 84.1 0.66 2.2E-05 37.7 3.1 31 179-209 187-217 (224)
17 1dpb_A Dihydrolipoyl-transacet 83.6 0.84 2.9E-05 37.6 3.6 30 179-208 208-237 (243)
18 1scz_A E2, dihydrolipoamide su 83.5 0.86 2.9E-05 37.2 3.6 30 179-208 196-225 (233)
19 3fot_A 15-O-acetyltransferase; 82.6 2.9 9.9E-05 38.1 7.1 28 84-111 70-97 (519)
20 2ii3_A Lipoamide acyltransfera 82.5 0.97 3.3E-05 37.7 3.6 30 179-208 224-253 (262)
21 3mae_A 2-oxoisovalerate dehydr 81.7 1.8 6.1E-05 35.9 4.9 32 179-210 210-241 (256)
22 3l60_A Branched-chain alpha-ke 78.6 1.6 5.5E-05 36.1 3.6 30 179-208 205-234 (250)
23 3dva_I Dihydrolipoyllysine-res 64.6 1.4 4.7E-05 39.4 0.0 29 180-208 392-420 (428)
24 4e17_B Catenin alpha-1; four h 49.6 8.2 0.00028 22.6 1.6 13 5-17 22-34 (40)
25 2xt6_A 2-oxoglutarate decarbox 41.5 17 0.0006 36.2 3.6 30 179-208 192-221 (1113)
26 4hhu_A OR280; engineered prote 33.5 86 0.0029 22.9 5.3 33 72-111 84-116 (170)
27 4hhu_A OR280; engineered prote 31.8 80 0.0027 23.0 4.9 24 88-111 12-35 (170)
28 4e18_B Catenin alpha-1; four h 29.3 25 0.00086 22.3 1.6 13 5-17 41-53 (59)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=2.7e-42 Score=312.98 Aligned_cols=182 Identities=31% Similarity=0.502 Sum_probs=154.6
Q ss_pred ccCceeEEEEeeeEEeCCCCCCCCcceeeCCcccccccCcceEEEEEEecCCCCChhhHHHHHHHHHHHHhhhhccCCce
Q 040740 30 MEKALEVLVRARESIKPAYPTPEHLRNFKLSLMDQITFPAYVSTIFLYKADGNVKADQISQCLKSSLSKTLTKFYPLAGR 109 (217)
Q Consensus 30 m~~~~~V~i~~~~~V~P~~pt~~~~~~~~LS~lD~~~~~~y~~~~~~F~~~~~~~~~~~~~~Lk~sLs~~L~~~p~LAGR 109 (217)
|.+ |+|++.++++|+|+.|||. +.++||+||+.+.+.|++.+|||+.+.. +....+++||+||+++|++|||||||
T Consensus 3 m~~-~~V~i~~~~~V~P~~~tp~--~~~~LS~lD~~~~~~~~~~~~~y~~~~~-~~~~~~~~Lk~sLs~~L~~f~plAGR 78 (439)
T 4g22_A 3 MGS-MKIEVKESTMVRPAQETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTGS-SNFFDAKVLKDALSRALVPFYPMAGR 78 (439)
T ss_dssp ----CCEEEEEEEEECCSSCCCC--CEECCCHHHHSCCTTCCCEEEEECCCSC-TTTTCHHHHHHHHHHHTTTTGGGGCE
T ss_pred CCc-eEEEEeeeEEEeCCCCCCC--CeecCChhHhCccccceeeEEEEcCCCC-ccccHHHHHHHHHHHHHhhcccccee
Confidence 444 8999999999999999975 4699999999987899999999997543 23356899999999999999999999
Q ss_pred ec----CceEEEeCCCCcEEEEeecccChhhhcCCCCchhhcccccCCCCCCCCCCCCCCeEEEEEEEeecCcEEEEecc
Q 040740 110 VK----DDFSIECNDEGAEYVEALANGFLFEYLQKPDQNLLRDFHPFNYAESPVASNGGPMMRIQATFFKCGGLAITVCT 185 (217)
Q Consensus 110 l~----~~~~I~c~~~Gv~f~~a~~d~sl~~l~~~p~~~~~~~l~P~~~~~~~~~~~~~Pll~vQvT~f~cGG~~Lgi~~ 185 (217)
|+ ++++|+||++||.|++|++|.+++|+........++.|+|..+. ..+..+.|++.+|+|+|+|||++||+++
T Consensus 79 l~~~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p~~~~~~l~p~~~~--~~~~~~~pll~vQvT~f~cGG~~lg~~~ 156 (439)
T 4g22_A 79 LKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPAVDY--SQGISSYALLVLQVTYFKCGGVSLGVGM 156 (439)
T ss_dssp EEECTTSCEEEECCCCCEEEEEEEESSCGGGGTTCCCCGGGGGGSCCCCT--TSCTTSSCSEEEEEEECTTSCEEEEEEE
T ss_pred eeeCCCCCEEEEECCCCCEEEEEEcCCcHHHhcCCCCCHHHHhcCCCCCc--ccccccCceeEEEEEEecCCCEEEEEEe
Confidence 98 47999999999999999999999999763222356778886543 1224568999999999999999999999
Q ss_pred cccccchhhHHHHHHHHHHHhccCCCCCCCCC
Q 040740 186 CHKLIDGVSLGIFVNSWTTTARAGNKEVVPRF 217 (217)
Q Consensus 186 ~H~v~Dg~g~~~Fl~~WA~~~rg~~~~~~P~f 217 (217)
||.++||.|+++|+++||++|||.+...+|+|
T Consensus 157 ~H~v~Dg~~~~~Fl~~wa~~~rg~~~~~~P~~ 188 (439)
T 4g22_A 157 RHHAADGFSGLHFINSWSDMARGLDVTLPPFI 188 (439)
T ss_dssp CTTTCCHHHHHHHHHHHHHHHTTCCCSSCCBC
T ss_pred eeccCcHHHHHHHHHHHHHHhCCCCCCCCCcc
Confidence 99999999999999999999999876666764
No 2
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=1.2e-41 Score=307.24 Aligned_cols=184 Identities=36% Similarity=0.583 Sum_probs=157.2
Q ss_pred eeEEEEeeeEEeCCCCCCCCcceeeCCcccccccCcceEEEEEEecCCCC--ChhhHHHHHHHHHHHHhhhhccCCceec
Q 040740 34 LEVLVRARESIKPAYPTPEHLRNFKLSLMDQITFPAYVSTIFLYKADGNV--KADQISQCLKSSLSKTLTKFYPLAGRVK 111 (217)
Q Consensus 34 ~~V~i~~~~~V~P~~pt~~~~~~~~LS~lD~~~~~~y~~~~~~F~~~~~~--~~~~~~~~Lk~sLs~~L~~~p~LAGRl~ 111 (217)
|+|++.++++|+|+.|||.+.+.++||+||+.+.+.|++.+|||+.++.. +....+++||+||+++|++||||||||+
T Consensus 3 m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~ 82 (421)
T 2bgh_A 3 PQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLTHFYPLAGRIN 82 (421)
T ss_dssp -CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTTTSGGGGSEEE
T ss_pred ceEEEeeeEEEeCCCCCCCCCcccCCChHHhcccccccceEEEEeCCCccccchhhHHHHHHHHHHHHhhhcchhccccC
Confidence 78999999999999999875568999999998778999999999975431 3567899999999999999999999999
Q ss_pred CceEEEeCCCCcEEEEeecccChhhhcCC-CCchhhcccccCCCCCCCC-CCCCCCeEEEEEEEeecCcEEEEecccccc
Q 040740 112 DDFSIECNDEGAEYVEALANGFLFEYLQK-PDQNLLRDFHPFNYAESPV-ASNGGPMMRIQATFFKCGGLAITVCTCHKL 189 (217)
Q Consensus 112 ~~~~I~c~~~Gv~f~~a~~d~sl~~l~~~-p~~~~~~~l~P~~~~~~~~-~~~~~Pll~vQvT~f~cGG~~Lgi~~~H~v 189 (217)
++++|+||++||.|++|+++.+++|+... |+...++.|+|.......+ ...+.|++.+|+|+|+|||++||+++||.+
T Consensus 83 ~~~~i~c~~~Gv~fv~A~~d~~l~~~~~~~p~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvt~f~cgG~~lg~~~~H~v 162 (421)
T 2bgh_A 83 VNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPSAAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKI 162 (421)
T ss_dssp TTTEEECCCCCEEEEEEEESSCHHHHHSCCSSGGGGGGGSSSCSSSSSSSCCCTTCSEEEEEEECTTSCEEEEEEEETTT
T ss_pred CCcEEEEcCCceEEEEEEEcCCHHHHhccCCChHHHHhcCCCCCCccccccccCCceEEEEEEEEcCCCEEEEEEeeEEe
Confidence 89999999999999999999999999875 6655677888866210000 034689999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHhccCCCCCCCCC
Q 040740 190 IDGVSLGIFVNSWTTTARAGNKEVVPRF 217 (217)
Q Consensus 190 ~Dg~g~~~Fl~~WA~~~rg~~~~~~P~f 217 (217)
+||.|+++|+++||++|||.+...+|.|
T Consensus 163 ~Dg~~~~~fl~~wa~~~rg~~~~~~P~~ 190 (421)
T 2bgh_A 163 ADVLSLATFLNAWTATCRGETEIVLPNF 190 (421)
T ss_dssp CCHHHHHHHHHHHHHHHTTCSCCCCCBC
T ss_pred chHHHHHHHHHHHHHHhcCCCCCCCCcc
Confidence 9999999999999999999764455654
No 3
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=2e-38 Score=288.38 Aligned_cols=179 Identities=23% Similarity=0.310 Sum_probs=144.7
Q ss_pred ccCceeEEEEeeeEEeCCCCCCCCcceeeCCcccccccC-cceEEEEEEecCCCCC--hhhHHHHHHHHHHHHhhhhccC
Q 040740 30 MEKALEVLVRARESIKPAYPTPEHLRNFKLSLMDQITFP-AYVSTIFLYKADGNVK--ADQISQCLKSSLSKTLTKFYPL 106 (217)
Q Consensus 30 m~~~~~V~i~~~~~V~P~~pt~~~~~~~~LS~lD~~~~~-~y~~~~~~F~~~~~~~--~~~~~~~Lk~sLs~~L~~~p~L 106 (217)
|++.++|+|.++++|+|+.+++. .+.++||++|+.+.. .|++.+|||+.+...+ .+..+++||+||+++|++||||
T Consensus 1 ~~~~~~v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~pl 79 (454)
T 2e1v_A 1 MASLPILTVLEQSQVSPPPDTLG-DKSLQLTFFDFFWLRSPPINNLFFYELPITRSQFTETVVPNIKHSLSITLKHFYPF 79 (454)
T ss_dssp -----CEEEEEEEEECCCTTSCC-CEEEECCHHHHTTTTCCCEEEEEEEECCCCHHHHHHTHHHHHHHHHHHHHTTCGGG
T ss_pred CCCCceEEEEEEEEEeCCCCCCC-CceecCchHHhhhhccCCccEEEEEeCCCCcchhhHHHHHHHHHHHHHHhhhcccc
Confidence 66668899999999999987544 478999999998654 6999999999654312 3457999999999999999999
Q ss_pred Cceec--C----ceEEEeC-CCCcEEEEeecccChhhhcCC-C-CchhhcccccCCCCCC-CCCCCCCCeEEEEEEEeec
Q 040740 107 AGRVK--D----DFSIECN-DEGAEYVEALANGFLFEYLQK-P-DQNLLRDFHPFNYAES-PVASNGGPMMRIQATFFKC 176 (217)
Q Consensus 107 AGRl~--~----~~~I~c~-~~Gv~f~~a~~d~sl~~l~~~-p-~~~~~~~l~P~~~~~~-~~~~~~~Pll~vQvT~f~c 176 (217)
||||+ + +++|+|| ++||.|++|+++.+++++... + +...++.|+|..+... ..+..+.|++.+|+|+|+|
T Consensus 80 AGRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~c 159 (454)
T 2e1v_A 80 VGKLVVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLFPN 159 (454)
T ss_dssp GSEEEECSSSSSCCEEEECTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEEETT
T ss_pred ceeeeeccCCCCCEEEEECCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEEecC
Confidence 99997 2 6899999 599999999999999999753 2 2345677888654211 0112345999999999999
Q ss_pred CcEEEEecccccccchhhHHHHHHHHHHHhc-cC
Q 040740 177 GGLAITVCTCHKLIDGVSLGIFVNSWTTTAR-AG 209 (217)
Q Consensus 177 GG~~Lgi~~~H~v~Dg~g~~~Fl~~WA~~~r-g~ 209 (217)
||++||+++||.++||.|+++|+++||++|| |.
T Consensus 160 gG~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~ 193 (454)
T 2e1v_A 160 QGIAIGITNHHCLGDASTRFCFLKAWTSIARSGN 193 (454)
T ss_dssp TEEEEEEEECGGGCCHHHHHHHHHHHHHHHHTTS
T ss_pred CcEEEEEEeeeeecchhHHHHHHHHHHHHhccCC
Confidence 9999999999999999999999999999999 76
No 4
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=1.4e-37 Score=282.65 Aligned_cols=172 Identities=21% Similarity=0.266 Sum_probs=143.7
Q ss_pred EEEEeeeEEeCCCCCCCCcceeeCCcccccccC-cceEEEEEEecCCCCC--hhhHHHHHHHHHHHHhhhhccCCceec-
Q 040740 36 VLVRARESIKPAYPTPEHLRNFKLSLMDQITFP-AYVSTIFLYKADGNVK--ADQISQCLKSSLSKTLTKFYPLAGRVK- 111 (217)
Q Consensus 36 V~i~~~~~V~P~~pt~~~~~~~~LS~lD~~~~~-~y~~~~~~F~~~~~~~--~~~~~~~Lk~sLs~~L~~~p~LAGRl~- 111 (217)
|+|.++++|+|+.+++. .+.++||+||+.+.+ .|++.+|||+.+.+.+ .+..+++||+||+++|++||||||||+
T Consensus 2 v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~ 80 (453)
T 2xr7_A 2 ASVIEQCQVVPSPGSAT-ELTLPLTYFDHVWLAFHRMRRILFYKLPISRPDFVQTIIPTLKDSLSLTLKYYLPLAGNVAC 80 (453)
T ss_dssp CEEEEESCCCCCTTCCS-EEEEECCHHHHGGGGSCCEEEEEEEECCCCSHHHHHTHHHHHHHHHHHHHTTSGGGGSCCEE
T ss_pred eEEEEEEEecCCCCCCC-CceECCCHHHhhhhhcCCccEEEEEeCCCCCchhHHHHHHHHHHHHHHHhhhccccCeeEEc
Confidence 78999999999987544 478999999998654 6999999999764322 446799999999999999999999995
Q ss_pred -----CceEEEeC-CCCcEEEEeecccChhhhcCC--CCchhhcccccCCCCCCCC--CCCCCCeEEEEEEEeecCcEEE
Q 040740 112 -----DDFSIECN-DEGAEYVEALANGFLFEYLQK--PDQNLLRDFHPFNYAESPV--ASNGGPMMRIQATFFKCGGLAI 181 (217)
Q Consensus 112 -----~~~~I~c~-~~Gv~f~~a~~d~sl~~l~~~--p~~~~~~~l~P~~~~~~~~--~~~~~Pll~vQvT~f~cGG~~L 181 (217)
++++|+|| ++||.|++|+++.+++++... ++...++.|+|..+... + ...+.|++.+|+|+|+|||++|
T Consensus 81 ~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~-~~~~~~~~pll~vQvT~f~cGG~~l 159 (453)
T 2xr7_A 81 PQDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEPK-DAPGVQLAPVLAIQVTLFPNHGISI 159 (453)
T ss_dssp ESSTTCCCEEEEETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCCE-EETTEEECCCEEEEEEEETTTEEEE
T ss_pred cCCCCCCEEEEecCCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCcc-cccccccCCeEEEEEEEccCCcEEE
Confidence 27899999 599999999999999999752 23445677888653210 0 0122899999999999999999
Q ss_pred EecccccccchhhHHHHHHHHHHHhc-cC
Q 040740 182 TVCTCHKLIDGVSLGIFVNSWTTTAR-AG 209 (217)
Q Consensus 182 gi~~~H~v~Dg~g~~~Fl~~WA~~~r-g~ 209 (217)
|+++||+++||.|+++|+++||++|| |.
T Consensus 160 g~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~ 188 (453)
T 2xr7_A 160 GFTNHHVAGDGATIVKFVRAWALLNKFGG 188 (453)
T ss_dssp EEEECTTTCCSHHHHHHHHHHHHHHHTTT
T ss_pred EEeeeeeeechhHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999 76
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=99.96 E-value=3.4e-29 Score=226.96 Aligned_cols=152 Identities=18% Similarity=0.204 Sum_probs=117.5
Q ss_pred eeCCcccccc--cCcceEEEEEEecCCCCChhhHHHHHHHHHHHHhhhhccCCceec---------CceEEEeCCCCcEE
Q 040740 57 FKLSLMDQIT--FPAYVSTIFLYKADGNVKADQISQCLKSSLSKTLTKFYPLAGRVK---------DDFSIECNDEGAEY 125 (217)
Q Consensus 57 ~~LS~lD~~~--~~~y~~~~~~F~~~~~~~~~~~~~~Lk~sLs~~L~~~p~LAGRl~---------~~~~I~c~~~Gv~f 125 (217)
++||++|+.+ ++.|++.+|||+.+++.+....+++||+||+++|++||||||||+ ++++|.|++.++.|
T Consensus 5 ~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~~~~~~ 84 (451)
T 2rkv_A 5 IQLDTLGQLPGLLSIYTQISLLYPVSDSSQYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFEDVPRV 84 (451)
T ss_dssp EECCGGGGCTTGGGCEEEEEEEEECSCGGGHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCCSSCEE
T ss_pred ccCChhhcCccccccceeEEEEEECCCCCCHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecCCCCeE
Confidence 6999999987 589999999999643223466899999999999999999999996 14789888777779
Q ss_pred EEeeccc-----ChhhhcC--CCCchhh--cccccCCCCCC---CCCCCCCCeEEEEEEEeecCcEEEEecccccccchh
Q 040740 126 VEALANG-----FLFEYLQ--KPDQNLL--RDFHPFNYAES---PVASNGGPMMRIQATFFKCGGLAITVCTCHKLIDGV 193 (217)
Q Consensus 126 ~~a~~d~-----sl~~l~~--~p~~~~~--~~l~P~~~~~~---~~~~~~~Pll~vQvT~f~cGG~~Lgi~~~H~v~Dg~ 193 (217)
++++++. +++++.. .|. ..+ ..+.|....+. .....+.|++.+|+|+| |||++||+++||+++||.
T Consensus 85 ~va~~~~d~~~p~~~~l~~~~~p~-~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~~-~GG~~lg~~~~H~v~Dg~ 162 (451)
T 2rkv_A 85 VVKDLRDDPSAPTIEGMRKAGYPM-AMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFI-KGGLILTVNGQHGAMDMV 162 (451)
T ss_dssp EEEECTTCTTSCBHHHHHHHTSCG-GGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEEE-BTEEEEEEEEETTTCCHH
T ss_pred EEEeCCCCCCCCCHHHHHHcCCCh-hhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEEe-cCceeeeeeehhccccHH
Confidence 9988764 5777753 232 111 12333221110 01134589999999955 899999999999999999
Q ss_pred hHHHHHHHHHHHhccCC
Q 040740 194 SLGIFVNSWTTTARAGN 210 (217)
Q Consensus 194 g~~~Fl~~WA~~~rg~~ 210 (217)
|+++|+++||++|||.+
T Consensus 163 g~~~Fl~awa~~~rg~~ 179 (451)
T 2rkv_A 163 GQDAVIRLLSKACRNDP 179 (451)
T ss_dssp HHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhcCCC
Confidence 99999999999999975
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=98.02 E-value=9.2e-05 Score=64.66 Aligned_cols=132 Identities=13% Similarity=0.139 Sum_probs=81.5
Q ss_pred ceeeCCccccccc-C-cceEEEEEEecCCCCChhhHHHHHHHHHHHHhhhhccCCceec--C-c-eEEEeCCCCcE-EEE
Q 040740 55 RNFKLSLMDQITF-P-AYVSTIFLYKADGNVKADQISQCLKSSLSKTLTKFYPLAGRVK--D-D-FSIECNDEGAE-YVE 127 (217)
Q Consensus 55 ~~~~LS~lD~~~~-~-~y~~~~~~F~~~~~~~~~~~~~~Lk~sLs~~L~~~p~LAGRl~--~-~-~~I~c~~~Gv~-f~~ 127 (217)
..+|||++.+.+. . +++...+-++.+ ...++|+++|.+++.++|.|-.++. + + ..+........ +.+
T Consensus 6 ~~~pls~~Q~~~~~~~y~~~~~~~l~g~------ld~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~~~~~~ 79 (422)
T 1q9j_A 6 VIRKLSHSEEVFAQYEVFTSMTIQLRGV------IDVDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHSGICV 79 (422)
T ss_dssp EEEECCHHHHHHHHTTCEEEEEEEEESC------CCHHHHHHHHHHHHHHCGGGSEEEEECTTSSEEEEECCSSSCCCEE
T ss_pred eeecCCHHHHHHHhcCceEEEEEEEecC------CCHHHHHHHHHHHHHhCccceEEEEecCCcceeeeccCCCCCceEE
Confidence 4689999987543 2 335555555533 3478999999999999999988775 1 1 12212211111 111
Q ss_pred eecccChhhhcCCCCchhhcccccCCCCCCCCCCCCCCeEEEEEEEeecCcEEEEecccccccchhhHHHHHHHHHHHhc
Q 040740 128 ALANGFLFEYLQKPDQNLLRDFHPFNYAESPVASNGGPMMRIQATFFKCGGLAITVCTCHKLIDGVSLGIFVNSWTTTAR 207 (217)
Q Consensus 128 a~~d~sl~~l~~~p~~~~~~~l~P~~~~~~~~~~~~~Pll~vQvT~f~cGG~~Lgi~~~H~v~Dg~g~~~Fl~~WA~~~r 207 (217)
. ++........+.. .. . . -+ ...|++.+.+.. ..++..|.+.+||.++||.|+..|++.|.++++
T Consensus 80 ~-------d~~~~~~~~~~~~---~~-~-~-~d-~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y~ 144 (422)
T 1q9j_A 80 I-------DGTAATNGSPSGN---AE-L-R-LD-QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDELFSRYT 144 (422)
T ss_dssp E-------C---------------CC-C-C-CC-TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHH
T ss_pred E-------ECCCCCcchhhhc---cc-C-c-cC-CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHHHHHHHH
Confidence 1 1111000000100 00 0 0 11 357888888777 777899999999999999999999999999887
No 7
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=97.33 E-value=0.0019 Score=57.86 Aligned_cols=137 Identities=14% Similarity=0.078 Sum_probs=83.4
Q ss_pred ceeeCCcccccc-------c--CcceEEEEEEecCCCCChhhHHHHHHHHHHHHhhhhccCCceec--C-ceEEEeCCCC
Q 040740 55 RNFKLSLMDQIT-------F--PAYVSTIFLYKADGNVKADQISQCLKSSLSKTLTKFYPLAGRVK--D-DFSIECNDEG 122 (217)
Q Consensus 55 ~~~~LS~lD~~~-------~--~~y~~~~~~F~~~~~~~~~~~~~~Lk~sLs~~L~~~p~LAGRl~--~-~~~I~c~~~G 122 (217)
..+|||+.-+.+ + .+.+...+-++.+ ...++|+++|.+++.+++.|--++. + .+.+.....
T Consensus 12 ~~~Pls~~Q~~~~~~~~~~~~~~y~~~~~~~l~g~------ld~~~L~~A~~~lv~rh~~LRt~f~~~~~~~~~v~~~~- 84 (493)
T 4hvm_A 12 GLRRASFLQRGAWRWLREAPPAAAFAARGLLGSGR------IDDDRLAAAADEVLDAFPLLRVNFVDDDGLWMRTRENA- 84 (493)
T ss_dssp CEEECCHHHHHHHHHHTTSCGGGGEEEEEEEEESS------CCHHHHHHHHHHHHHHCGGGGEEEEESSSEEEEECSCC-
T ss_pred CCCCCCHHHHHHHHHHhhCCCCcceeEEEEEEeCC------CCHHHHHHHHHHHHHhchhceeEEEccCCEEEEecCCC-
Confidence 458888875421 1 1223444444432 3588999999999999999977775 2 222111222
Q ss_pred cEEEEeecccChhhhcCCCCc-hh----hcccccCCCCCCCCCCCCCCeEEEEEEEeecCcEEEEecccccccchhhHHH
Q 040740 123 AEYVEALANGFLFEYLQKPDQ-NL----LRDFHPFNYAESPVASNGGPMMRIQATFFKCGGLAITVCTCHKLIDGVSLGI 197 (217)
Q Consensus 123 v~f~~a~~d~sl~~l~~~p~~-~~----~~~l~P~~~~~~~~~~~~~Pll~vQvT~f~cGG~~Lgi~~~H~v~Dg~g~~~ 197 (217)
+.+.+.+. ...++. .. .....-.. . + ....|++.+.+.....+...|.+.+||.++||.|+..
T Consensus 85 ~~~~~~d~-------~~~~~~~~~~~~~~~~~~~~~-f---d-l~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~ 152 (493)
T 4hvm_A 85 DALVRSDL-------RGHPDPQARCVELLRADRDRP-T---D-PERDPLVRLHLVRLSETDVVLGVVAHQMLLDARSRYM 152 (493)
T ss_dssp CCEEEEEC-------TTSSSHHHHHHHHHHHHHSSC-C---C-TTTSCSEEEEEEECSSSEEEEEEEEETTTCCHHHHHH
T ss_pred CCceEEEC-------CCCCchHHHHHHHHHHHhcCC-C---C-CCCCCeEEEEEEEECCCcEEEEEecchhhccHHHHHH
Confidence 43333221 111110 11 11111111 1 1 2345888887777765668999999999999999999
Q ss_pred HHHHHHHHhccCC
Q 040740 198 FVNSWTTTARAGN 210 (217)
Q Consensus 198 Fl~~WA~~~rg~~ 210 (217)
|++.+.+++.|.+
T Consensus 153 l~~~l~~~Y~g~~ 165 (493)
T 4hvm_A 153 VLGAVWQAYYGRF 165 (493)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCC
Confidence 9999999997765
No 8
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=97.17 E-value=0.0077 Score=52.67 Aligned_cols=117 Identities=10% Similarity=0.043 Sum_probs=72.3
Q ss_pred eEEEEEEecCCCCChhhHHHHHHHHHHHHhhhhccCCceecC--ceEEEeCCCCcEEEEeecccChhhhcCCCCc-h---
Q 040740 71 VSTIFLYKADGNVKADQISQCLKSSLSKTLTKFYPLAGRVKD--DFSIECNDEGAEYVEALANGFLFEYLQKPDQ-N--- 144 (217)
Q Consensus 71 ~~~~~~F~~~~~~~~~~~~~~Lk~sLs~~L~~~p~LAGRl~~--~~~I~c~~~Gv~f~~a~~d~sl~~l~~~p~~-~--- 144 (217)
+...+-++.+ ...++|+++|.+++.+++.|--++.. . .+ .....+.+.+ -++...++. .
T Consensus 23 ~~~~~~l~g~------ld~~~L~~A~~~lv~rh~~LRt~f~~~~~-~v-~~~~~~~~~~-------~d~~~~~~~~~~~~ 87 (436)
T 1l5a_A 23 VAHSLRLTGP------LDTTLLLRALHLTVSEIDLFRARFSAQGE-LY-WHPFSPPIDY-------QDLSIHLEAEPLAW 87 (436)
T ss_dssp EEEEEEEESS------CCHHHHHHHHHHHHHTCGGGGEEECTTCC-EE-ECSSCCCCEE-------EECTTCTTHHHHHH
T ss_pred eeEEEEEeCC------CCHHHHHHHHHHHHHHhheeEEEEEecCC-eE-CCCcCCCccE-------EeCCCCCCHHHHHH
Confidence 4555555533 34789999999999999999777752 2 11 1111111111 111111110 0
Q ss_pred -hhcccccCCCCCCCCCCCCCCeEEEEEEEeecCcEEEEecccccccchhhHHHHHHHHHHHhc
Q 040740 145 -LLRDFHPFNYAESPVASNGGPMMRIQATFFKCGGLAITVCTCHKLIDGVSLGIFVNSWTTTAR 207 (217)
Q Consensus 145 -~~~~l~P~~~~~~~~~~~~~Pll~vQvT~f~cGG~~Lgi~~~H~v~Dg~g~~~Fl~~WA~~~r 207 (217)
......-.. . + ....|++.+.+-....+...|.+.+||.++||.|+..|++.+.++.+
T Consensus 88 ~~~~~~~~~~-f---d-l~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~ 146 (436)
T 1l5a_A 88 RQIEQDLQRS-S---T-LIDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQ 146 (436)
T ss_dssp HHHHHHHTSC-C---C-CBTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC-C---C-cCCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHH
Confidence 011111111 1 1 23458888877777667789999999999999999999999999887
No 9
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=97.09 E-value=0.0069 Score=54.55 Aligned_cols=137 Identities=12% Similarity=0.084 Sum_probs=83.5
Q ss_pred ceeeCCccccc-c------c--Ccc-eEEEEEEecCCCCChhhHHHHHHHHHHHHhhhhccCCceec--C-ce-EEEeCC
Q 040740 55 RNFKLSLMDQI-T------F--PAY-VSTIFLYKADGNVKADQISQCLKSSLSKTLTKFYPLAGRVK--D-DF-SIECND 120 (217)
Q Consensus 55 ~~~~LS~lD~~-~------~--~~y-~~~~~~F~~~~~~~~~~~~~~Lk~sLs~~L~~~p~LAGRl~--~-~~-~I~c~~ 120 (217)
..+|||+.-.. + + ..| +...+-++.+ ...++|++++.+++.+++.|--++. + .+ .+....
T Consensus 95 ~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~------ld~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~~ 168 (520)
T 2jgp_A 95 AYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEGK------LERTRVEAAFQRLIARHESLRTSFAVVNGEPVQNIHED 168 (520)
T ss_dssp SSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEEC------CCHHHHHHHHHHHHHHCGGGGEEEEEETTEEEEEECSC
T ss_pred CCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECCC------CCHHHHHHHHHHHHHHhHhheeEEEeeCCEEEEEECCC
Confidence 45899986542 1 1 123 5555666543 3488999999999999999977764 1 11 111111
Q ss_pred CCcEEEEeecccChhhhcCCCCchhhcccccCCCCCCCCCCCCCCeEEEEEEEeecCcEEEEecccccccchhhHHHHHH
Q 040740 121 EGAEYVEALANGFLFEYLQKPDQNLLRDFHPFNYAESPVASNGGPMMRIQATFFKCGGLAITVCTCHKLIDGVSLGIFVN 200 (217)
Q Consensus 121 ~Gv~f~~a~~d~sl~~l~~~p~~~~~~~l~P~~~~~~~~~~~~~Pll~vQvT~f~cGG~~Lgi~~~H~v~Dg~g~~~Fl~ 200 (217)
..+.+.+.+ .+-+++.. .....-. +. + ....|++.+.+-....+...|-+.+||.++||.|+..|++
T Consensus 169 ~~~~~~~~~--~~~~~~~~------~~~~~~~-~f---d-l~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~ 235 (520)
T 2jgp_A 169 VPFALAYSE--VTEEEARE------LVSSLVQ-PF---D-LEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSGILLA 235 (520)
T ss_dssp CCCCCEEEE--CCHHHHHH------HHHHTCC-CC---C-TTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHHHHHH
T ss_pred CCCceEEEe--CCHHHHHH------HHHHhcC-CC---C-CCCCcceeEEEEEEcCCcEEEEEEccceeecHhHHHHHHH
Confidence 111111111 11111100 1000101 11 1 2346888887777766778999999999999999999999
Q ss_pred HHHHHhccCC
Q 040740 201 SWTTTARAGN 210 (217)
Q Consensus 201 ~WA~~~rg~~ 210 (217)
.+.++.++.+
T Consensus 236 el~~~Y~~~~ 245 (520)
T 2jgp_A 236 EWVQLYQGDV 245 (520)
T ss_dssp HHHHHHTTCC
T ss_pred HHHHHHccCC
Confidence 9999999864
No 10
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=95.87 E-value=0.2 Score=43.85 Aligned_cols=138 Identities=10% Similarity=0.072 Sum_probs=78.5
Q ss_pred ceeeCCcccccc-----c--CcceEEEEEEecCCCCChhhHHHHHHHHHHHHhhhhccCCceecC---ce-EEEeC--CC
Q 040740 55 RNFKLSLMDQIT-----F--PAYVSTIFLYKADGNVKADQISQCLKSSLSKTLTKFYPLAGRVKD---DF-SIECN--DE 121 (217)
Q Consensus 55 ~~~~LS~lD~~~-----~--~~y~~~~~~F~~~~~~~~~~~~~~Lk~sLs~~L~~~p~LAGRl~~---~~-~I~c~--~~ 121 (217)
..+|||+..+.+ . ..| ...+.|+... ....++|+++|.+++.+.+.|--++.. .+ .+... ..
T Consensus 16 ~~~pls~~Q~~~~~~~~~~~~~y-~~~~~~~l~g----~ld~~~L~~Al~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~ 90 (466)
T 2xhg_A 16 GNVPLTPIQKWFFGKNFTNTGHW-NQSSVLYRPE----GFDPKVIQSVMDKIIEHHDALRMVYQHENGNVVQHNRGLGGQ 90 (466)
T ss_dssp EECCCCHHHHHHHHTTCTTTTCB-EEEEEEEETT----CCCHHHHHHHHHHHHHHSGGGGEEEECGGGCCEEEECCSSSC
T ss_pred CCCCCCHHHHHHHhCCCCCcCcc-eeEEEEEcCC----CCCHHHHHHHHHHHHHhChHhheEEecCCCceeeeccccccc
Confidence 457888765521 1 123 2334444433 235889999999999999999877752 22 22111 12
Q ss_pred CcEEEEeecc--cChhhhcCCCCchhhcccccCCCCCCCCCCCCCCeEEEEEEEeecCcEEEEecccccccchhhHHHHH
Q 040740 122 GAEYVEALAN--GFLFEYLQKPDQNLLRDFHPFNYAESPVASNGGPMMRIQATFFKCGGLAITVCTCHKLIDGVSLGIFV 199 (217)
Q Consensus 122 Gv~f~~a~~d--~sl~~l~~~p~~~~~~~l~P~~~~~~~~~~~~~Pll~vQvT~f~cGG~~Lgi~~~H~v~Dg~g~~~Fl 199 (217)
.+.+.+.+.. ...++... ..... .-. +. + ....|++.+.+.... ++-.|-+.+||.++||.|+..|+
T Consensus 91 ~~~~~~~d~~~~~~~~~~~~----~~~~~-~~~-~f---d-l~~~pl~r~~l~~~~-~~~~l~l~~HH~i~Dg~S~~~l~ 159 (466)
T 2xhg_A 91 LYDFFSYNLTAQPDVQQAIE----AETQR-LHS-SM---N-LQEGPLVKVALFQTL-HGDHLFLAIHHLVVDGISWRILF 159 (466)
T ss_dssp CCEEEEEECTTCSCHHHHHH----HHHHH-HHT-TC---C-TTTCCCEEEEEEEET-TEEEEEEEEEGGGCCHHHHHHHH
T ss_pred cceeEEEecCCcccHHHHHH----HHHHH-HHh-cc---C-CCCCCeEEEEEEEcC-CCCEEEEEeeeeeechhhHHHHH
Confidence 2333322211 01111000 00011 101 11 1 234688888877776 44446799999999999999999
Q ss_pred HHHHHHhcc
Q 040740 200 NSWTTTARA 208 (217)
Q Consensus 200 ~~WA~~~rg 208 (217)
+.+.++.++
T Consensus 160 ~el~~~Y~~ 168 (466)
T 2xhg_A 160 EDLATGYAQ 168 (466)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988753
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=95.38 E-value=0.074 Score=53.63 Aligned_cols=121 Identities=12% Similarity=0.078 Sum_probs=74.2
Q ss_pred eEEEEEEecCCCCChhhHHHHHHHHHHHHhhhhccCCceecC---c--eEEEeCCCCcEEEEeecccChhhhcCCCCc--
Q 040740 71 VSTIFLYKADGNVKADQISQCLKSSLSKTLTKFYPLAGRVKD---D--FSIECNDEGAEYVEALANGFLFEYLQKPDQ-- 143 (217)
Q Consensus 71 ~~~~~~F~~~~~~~~~~~~~~Lk~sLs~~L~~~p~LAGRl~~---~--~~I~c~~~Gv~f~~a~~d~sl~~l~~~p~~-- 143 (217)
+...+-++.+ ...++|+++|.+++.+.+.|--++.. . ..+......+.+.+.+ +...+..
T Consensus 37 ~~~~~~l~g~------ld~~~l~~A~~~lv~rH~~LRt~f~~~~~~~p~Q~v~~~~~~~~~~~d-------~~~~~~~~~ 103 (1304)
T 2vsq_A 37 EQITMKVKGS------LNIKCLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVLKKRQFHIEEID-------LTHLTGSEQ 103 (1304)
T ss_dssp EEEEEEEEEC------CCHHHHHHHHHHHHHHCGGGGEEEECSSCSSCEEEEESCCCCCEEEEE-------CTTSCHHHH
T ss_pred EEEEEEEcCC------cCHHHHHHHHHHHHHhhhhceEEEEEcCCCeEEEEECCCCCCceEEEE-------CCCCCchhH
Confidence 4555555543 34889999999999999999776641 1 1222222222222211 1111110
Q ss_pred -hhhccccc---CCCCCCCCCCCCCCeEEEEEEEeecCcEEEEecccccccchhhHHHHHHHHHHHhcc
Q 040740 144 -NLLRDFHP---FNYAESPVASNGGPMMRIQATFFKCGGLAITVCTCHKLIDGVSLGIFVNSWTTTARA 208 (217)
Q Consensus 144 -~~~~~l~P---~~~~~~~~~~~~~Pll~vQvT~f~cGG~~Lgi~~~H~v~Dg~g~~~Fl~~WA~~~rg 208 (217)
..+..+.- ..+. + ....|++.+.+-+...+...|-+.+||.++||.|+..|++.+.++.++
T Consensus 104 ~~~~~~~~~~~~~~~f---d-l~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~ 168 (1304)
T 2vsq_A 104 TAKINEYKEQDKIRGF---D-LTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNA 168 (1304)
T ss_dssp HHHHHHHHHHHHHHCC---C-TTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCC---C-CCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHH
Confidence 00111110 0011 1 234688988888887678899999999999999999999999988764
No 12
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=85.65 E-value=0.61 Score=37.59 Aligned_cols=45 Identities=18% Similarity=0.336 Sum_probs=33.0
Q ss_pred CCeEEEEEEEeecCc--EEEEecccccccchhhHHHHHHHHHHHhcc
Q 040740 164 GPMMRIQATFFKCGG--LAITVCTCHKLIDGVSLGIFVNSWTTTARA 208 (217)
Q Consensus 164 ~Pll~vQvT~f~cGG--~~Lgi~~~H~v~Dg~g~~~Fl~~WA~~~rg 208 (217)
.|++.+=-..-+.|. +-|++++||.++||.-+..|++.+.+....
T Consensus 164 ~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le~ 210 (213)
T 3cla_A 164 APIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCNS 210 (213)
T ss_dssp SCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHTS
T ss_pred ccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHHh
Confidence 577754222222233 568999999999999999999999987643
No 13
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=84.99 E-value=0.68 Score=37.47 Aligned_cols=28 Identities=25% Similarity=0.415 Sum_probs=25.3
Q ss_pred EEEEecccccccchhhHHHHHHHHHHHh
Q 040740 179 LAITVCTCHKLIDGVSLGIFVNSWTTTA 206 (217)
Q Consensus 179 ~~Lgi~~~H~v~Dg~g~~~Fl~~WA~~~ 206 (217)
+-|++++||.++||.-+..|++.+.+..
T Consensus 189 m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 189 MPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 5689999999999999999999998764
No 14
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=84.66 E-value=0.72 Score=37.34 Aligned_cols=44 Identities=14% Similarity=0.351 Sum_probs=32.6
Q ss_pred CCeEEEEEEEeecCc--EEEEecccccccchhhHHHHHHHHHHHhc
Q 040740 164 GPMMRIQATFFKCGG--LAITVCTCHKLIDGVSLGIFVNSWTTTAR 207 (217)
Q Consensus 164 ~Pll~vQvT~f~cGG--~~Lgi~~~H~v~Dg~g~~~Fl~~WA~~~r 207 (217)
.|++.+=-..-+.|. +-|++++||.++||.-+..|++.+.+...
T Consensus 168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 476654322223233 56899999999999999999999998764
No 15
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=84.41 E-value=0.76 Score=37.68 Aligned_cols=30 Identities=13% Similarity=0.352 Sum_probs=27.5
Q ss_pred EEEEecccccccchhhHHHHHHHHHHHhcc
Q 040740 179 LAITVCTCHKLIDGVSLGIFVNSWTTTARA 208 (217)
Q Consensus 179 ~~Lgi~~~H~v~Dg~g~~~Fl~~WA~~~rg 208 (217)
+-|++++||.++||.-+..|++.+.+.+..
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 233 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLEK 233 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 679999999999999999999999987754
No 16
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=84.10 E-value=0.66 Score=37.73 Aligned_cols=31 Identities=19% Similarity=0.336 Sum_probs=27.9
Q ss_pred EEEEecccccccchhhHHHHHHHHHHHhccC
Q 040740 179 LAITVCTCHKLIDGVSLGIFVNSWTTTARAG 209 (217)
Q Consensus 179 ~~Lgi~~~H~v~Dg~g~~~Fl~~WA~~~rg~ 209 (217)
+-|+++++|.++||.-+..|++.|.+.....
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~p 217 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIEDP 217 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHTCT
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHhCH
Confidence 4489999999999999999999999988764
No 17
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=83.59 E-value=0.84 Score=37.56 Aligned_cols=30 Identities=13% Similarity=0.245 Sum_probs=27.3
Q ss_pred EEEEecccccccchhhHHHHHHHHHHHhcc
Q 040740 179 LAITVCTCHKLIDGVSLGIFVNSWTTTARA 208 (217)
Q Consensus 179 ~~Lgi~~~H~v~Dg~g~~~Fl~~WA~~~rg 208 (217)
+-|+++++|.++||.-+..|++.|.+.+..
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 237 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLAD 237 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHhC
Confidence 569999999999999999999999988764
No 18
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=83.48 E-value=0.86 Score=37.25 Aligned_cols=30 Identities=20% Similarity=0.235 Sum_probs=27.4
Q ss_pred EEEEecccccccchhhHHHHHHHHHHHhcc
Q 040740 179 LAITVCTCHKLIDGVSLGIFVNSWTTTARA 208 (217)
Q Consensus 179 ~~Lgi~~~H~v~Dg~g~~~Fl~~WA~~~rg 208 (217)
+-|+++++|.++||.-+..|++.+.+....
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 559999999999999999999999998765
No 19
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=82.56 E-value=2.9 Score=38.15 Aligned_cols=28 Identities=11% Similarity=0.058 Sum_probs=24.8
Q ss_pred ChhhHHHHHHHHHHHHhhhhccCCceec
Q 040740 84 KADQISQCLKSSLSKTLTKFYPLAGRVK 111 (217)
Q Consensus 84 ~~~~~~~~Lk~sLs~~L~~~p~LAGRl~ 111 (217)
...++.++||.|+-.+--.+|-+|+++.
T Consensus 70 ~~~~l~~~lr~AW~~lR~~hP~iA~~v~ 97 (519)
T 3fot_A 70 TLQNLKEMFELALLDARFEHPECACTVS 97 (519)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGGCEEE
T ss_pred cHHHHHHHHHHHHHHHHhhCCcceeEEe
Confidence 3568899999999999999999999986
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=82.50 E-value=0.97 Score=37.66 Aligned_cols=30 Identities=23% Similarity=0.564 Sum_probs=27.1
Q ss_pred EEEEecccccccchhhHHHHHHHHHHHhcc
Q 040740 179 LAITVCTCHKLIDGVSLGIFVNSWTTTARA 208 (217)
Q Consensus 179 ~~Lgi~~~H~v~Dg~g~~~Fl~~WA~~~rg 208 (217)
+-|+++++|.++||.-+..|++.|.+.+..
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le~ 253 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLEN 253 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHhC
Confidence 458999999999999999999999988754
No 21
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=81.66 E-value=1.8 Score=35.94 Aligned_cols=32 Identities=16% Similarity=0.387 Sum_probs=28.6
Q ss_pred EEEEecccccccchhhHHHHHHHHHHHhccCC
Q 040740 179 LAITVCTCHKLIDGVSLGIFVNSWTTTARAGN 210 (217)
Q Consensus 179 ~~Lgi~~~H~v~Dg~g~~~Fl~~WA~~~rg~~ 210 (217)
+-|+++++|.++||.-+..|++.|.+......
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~P~ 241 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEKIS 241 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHTCC
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhChH
Confidence 45999999999999999999999999987644
No 22
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=78.55 E-value=1.6 Score=36.10 Aligned_cols=30 Identities=17% Similarity=0.383 Sum_probs=27.3
Q ss_pred EEEEecccccccchhhHHHHHHHHHHHhcc
Q 040740 179 LAITVCTCHKLIDGVSLGIFVNSWTTTARA 208 (217)
Q Consensus 179 ~~Lgi~~~H~v~Dg~g~~~Fl~~WA~~~rg 208 (217)
+-|+++++|.++||.-+..|++.|.+....
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 234 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIES 234 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHhC
Confidence 458999999999999999999999998764
No 23
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=64.56 E-value=1.4 Score=39.35 Aligned_cols=29 Identities=21% Similarity=0.295 Sum_probs=0.0
Q ss_pred EEEecccccccchhhHHHHHHHHHHHhcc
Q 040740 180 AITVCTCHKLIDGVSLGIFVNSWTTTARA 208 (217)
Q Consensus 180 ~Lgi~~~H~v~Dg~g~~~Fl~~WA~~~rg 208 (217)
-|++++||.++||.-...|++.|.+.+..
T Consensus 392 ~lsls~DHRviDG~~aa~Fl~~lk~~Le~ 420 (428)
T 3dva_I 392 ALSLSFDHRMIDGATAQKALNHIKRLLSD 420 (428)
T ss_dssp -----------------------------
T ss_pred EEEEEecccccchHHHHHHHHHHHHHHhC
Confidence 49999999999999999999999988765
No 24
>4e17_B Catenin alpha-1; four helix bundle, cell adhesion; 2.30A {Mus musculus}
Probab=49.58 E-value=8.2 Score=22.60 Aligned_cols=13 Identities=46% Similarity=0.698 Sum_probs=10.8
Q ss_pred HHHHHHHHHhhhh
Q 040740 5 RATRQALKSILTR 17 (217)
Q Consensus 5 ~~~~~~~~~~~~~ 17 (217)
.|.|||||-|+|.
T Consensus 22 navrqALQdLlse 34 (40)
T 4e17_B 22 NAVRQALQDLLSE 34 (40)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3789999999874
No 25
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=41.50 E-value=17 Score=36.21 Aligned_cols=30 Identities=20% Similarity=0.330 Sum_probs=26.5
Q ss_pred EEEEecccccccchhhHHHHHHHHHHHhcc
Q 040740 179 LAITVCTCHKLIDGVSLGIFVNSWTTTARA 208 (217)
Q Consensus 179 ~~Lgi~~~H~v~Dg~g~~~Fl~~WA~~~rg 208 (217)
+-|+++++|.++||.-+..|++.+.+....
T Consensus 192 m~lsls~DHRviDGa~aa~FL~~lk~~Le~ 221 (1113)
T 2xt6_A 192 ITLTSTYDHRIIQGAESGDFLRTIHQLLLD 221 (1113)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHTTC
T ss_pred eEEEEEECcceechHHHHHHHHHHHHHHhC
Confidence 669999999999999999999988877654
No 26
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=33.51 E-value=86 Score=22.87 Aligned_cols=33 Identities=18% Similarity=0.374 Sum_probs=26.1
Q ss_pred EEEEEEecCCCCChhhHHHHHHHHHHHHhhhhccCCceec
Q 040740 72 STIFLYKADGNVKADQISQCLKSSLSKTLTKFYPLAGRVK 111 (217)
Q Consensus 72 ~~~~~F~~~~~~~~~~~~~~Lk~sLs~~L~~~p~LAGRl~ 111 (217)
-....|+.. .+++|+++|...+.+-..+||.+.
T Consensus 84 vm~i~f~gd-------dlea~ekalkemirqarkfagtvt 116 (170)
T 4hhu_A 84 VMVIVFEGD-------DLEALEKALKEMIRQARKFAGTVT 116 (170)
T ss_dssp EEEEEEECS-------CHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred EEEEEEecC-------cHHHHHHHHHHHHHHHHhhcceEE
Confidence 345566633 488999999999999999999986
No 27
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=31.76 E-value=80 Score=23.04 Aligned_cols=24 Identities=21% Similarity=0.295 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHhhhhccCCceec
Q 040740 88 ISQCLKSSLSKTLTKFYPLAGRVK 111 (217)
Q Consensus 88 ~~~~Lk~sLs~~L~~~p~LAGRl~ 111 (217)
.+++|+++|...+.+-..+||.+.
T Consensus 12 dlea~ekalkemirqarkfagtvt 35 (170)
T 4hhu_A 12 DLEALEKALKEMIRQARKFAGTVT 35 (170)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred cHHHHHHHHHHHHHHHHhhcceEE
Confidence 478899999999999999999875
No 28
>4e18_B Catenin alpha-1; four helix bundle, cell adhesion; 2.40A {Mus musculus}
Probab=29.34 E-value=25 Score=22.32 Aligned_cols=13 Identities=46% Similarity=0.698 Sum_probs=10.7
Q ss_pred HHHHHHHHHhhhh
Q 040740 5 RATRQALKSILTR 17 (217)
Q Consensus 5 ~~~~~~~~~~~~~ 17 (217)
.|.|||||-|+|.
T Consensus 41 navrqALQdLlsE 53 (59)
T 4e18_B 41 NAVRQALQDLLSE 53 (59)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3789999999874
Done!