Query 040741
Match_columns 457
No_of_seqs 183 out of 1886
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 11:20:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040741.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040741hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1104 NifS Cysteine sulfinat 100.0 7E-72 1.5E-76 526.3 40.4 381 58-441 2-386 (386)
2 KOG1549 Cysteine desulfurase N 100.0 9.6E-65 2.1E-69 478.9 33.3 388 53-442 39-428 (428)
3 TIGR02006 IscS cysteine desulf 100.0 3.6E-55 7.8E-60 437.1 45.1 399 58-457 4-402 (402)
4 PRK14012 cysteine desulfurase; 100.0 2.5E-52 5.5E-57 417.1 44.4 399 58-457 4-404 (404)
5 PLN02651 cysteine desulfurase 100.0 9.3E-51 2E-55 400.4 39.6 362 59-420 1-364 (364)
6 COG0520 csdA Selenocysteine ly 100.0 1.5E-49 3.2E-54 389.9 40.5 364 55-431 20-404 (405)
7 TIGR03402 FeS_nifS cysteine de 100.0 4.1E-49 9E-54 391.2 42.9 376 59-438 1-378 (379)
8 TIGR03403 nifS_epsilon cystein 100.0 2.5E-48 5.4E-53 385.8 42.9 374 59-436 1-379 (382)
9 PRK02948 cysteine desulfurase; 100.0 1.7E-46 3.7E-51 372.7 43.1 372 58-433 1-375 (381)
10 PRK09295 bifunctional cysteine 100.0 4.6E-46 1E-50 372.3 40.6 362 56-431 22-403 (406)
11 PLN02855 Bifunctional selenocy 100.0 1.1E-45 2.3E-50 371.6 41.9 370 56-437 31-423 (424)
12 TIGR03392 FeS_syn_CsdA cystein 100.0 1.6E-45 3.6E-50 367.6 40.5 364 55-433 14-396 (398)
13 PRK10874 cysteine sulfinate de 100.0 3.2E-45 6.9E-50 365.9 40.9 364 55-433 17-399 (401)
14 TIGR03235 DNA_S_dndA cysteine 100.0 1.2E-44 2.6E-49 355.8 37.7 349 60-410 1-353 (353)
15 PF00266 Aminotran_5: Aminotra 100.0 1.6E-44 3.5E-49 357.2 36.2 351 59-422 1-371 (371)
16 TIGR01979 sufS cysteine desulf 100.0 1.7E-43 3.8E-48 353.9 41.5 367 55-433 16-402 (403)
17 cd06453 SufS_like Cysteine des 100.0 3.1E-41 6.7E-46 334.3 38.7 352 59-426 1-373 (373)
18 PLN02724 Molybdenum cofactor s 100.0 3.5E-40 7.6E-45 352.4 36.8 370 52-431 29-487 (805)
19 TIGR01977 am_tr_V_EF2568 cyste 100.0 6.7E-39 1.5E-43 317.9 41.0 354 59-428 1-375 (376)
20 TIGR01976 am_tr_V_VC1184 cyste 100.0 5.2E-39 1.1E-43 321.0 38.9 357 58-426 18-397 (397)
21 TIGR01814 kynureninase kynuren 100.0 1.6E-37 3.5E-42 310.4 35.2 342 56-430 26-405 (406)
22 PLN02409 serine--glyoxylate am 100.0 4.3E-35 9.4E-40 291.8 33.0 341 58-434 9-374 (401)
23 cd06451 AGAT_like Alanine-glyo 100.0 2E-34 4.3E-39 283.7 31.9 333 63-431 4-356 (356)
24 PRK02769 histidine decarboxyla 100.0 2.5E-33 5.4E-38 274.4 33.4 335 55-431 20-371 (380)
25 TIGR02326 transamin_PhnW 2-ami 100.0 1.5E-33 3.3E-38 278.0 32.2 333 60-431 5-361 (363)
26 TIGR01788 Glu-decarb-GAD gluta 100.0 4.3E-33 9.4E-38 276.1 35.0 350 56-433 32-430 (431)
27 COG0075 Serine-pyruvate aminot 100.0 9.6E-33 2.1E-37 263.3 32.6 340 60-435 7-366 (383)
28 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 9.8E-33 2.1E-37 273.9 33.4 343 55-433 17-382 (387)
29 PLN03032 serine decarboxylase; 100.0 9.1E-33 2E-37 268.3 32.3 329 56-428 22-372 (374)
30 PRK13479 2-aminoethylphosphona 100.0 2.5E-32 5.4E-37 269.9 33.4 337 60-434 7-365 (368)
31 PTZ00094 serine hydroxymethylt 100.0 7.5E-33 1.6E-37 279.4 29.9 351 63-440 40-416 (452)
32 cd00611 PSAT_like Phosphoserin 100.0 2.7E-33 5.9E-38 274.4 23.5 335 63-429 4-353 (355)
33 PRK03080 phosphoserine aminotr 100.0 1.7E-32 3.7E-37 270.8 28.6 336 56-435 11-376 (378)
34 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 6.2E-31 1.3E-35 258.8 32.1 328 63-429 4-354 (355)
35 PRK13520 L-tyrosine decarboxyl 100.0 1.1E-30 2.3E-35 258.7 32.5 332 60-431 24-370 (371)
36 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 1.2E-30 2.5E-35 257.2 32.6 331 64-430 8-360 (361)
37 TIGR01364 serC_1 phosphoserine 100.0 4E-31 8.8E-36 257.1 28.4 327 68-432 2-348 (349)
38 PRK05355 3-phosphoserine/phosp 100.0 4.6E-31 1E-35 258.0 27.6 339 59-432 4-358 (360)
39 PRK06225 aspartate aminotransf 100.0 2.6E-30 5.7E-35 256.4 30.6 342 50-435 22-379 (380)
40 PLN02483 serine palmitoyltrans 100.0 1.4E-30 3.1E-35 264.0 29.0 349 38-433 88-467 (489)
41 PRK07179 hypothetical protein; 100.0 2.2E-30 4.9E-35 259.1 29.8 317 69-433 69-399 (407)
42 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 1.5E-29 3.3E-34 249.7 33.5 338 57-432 7-368 (370)
43 COG0436 Aspartate/tyrosine/aro 100.0 1.6E-29 3.5E-34 248.8 33.3 338 56-433 28-392 (393)
44 PRK05937 8-amino-7-oxononanoat 100.0 6.1E-30 1.3E-34 252.5 27.2 324 57-435 11-353 (370)
45 TIGR01822 2am3keto_CoA 2-amino 100.0 3.2E-29 7E-34 250.0 32.6 329 60-434 40-391 (393)
46 KOG1357 Serine palmitoyltransf 100.0 3.8E-31 8.3E-36 247.9 16.8 352 36-432 122-502 (519)
47 TIGR03812 tyr_de_CO2_Arch tyro 100.0 3.6E-28 7.9E-33 240.8 34.4 329 60-428 24-372 (373)
48 cd06450 DOPA_deC_like DOPA dec 100.0 3.9E-29 8.4E-34 245.1 26.9 281 93-428 30-344 (345)
49 cd06454 KBL_like KBL_like; thi 100.0 9.7E-29 2.1E-33 242.6 29.7 326 60-429 3-348 (349)
50 PRK05957 aspartate aminotransf 100.0 3.4E-28 7.3E-33 241.8 33.4 338 57-434 28-387 (389)
51 cd00613 GDC-P Glycine cleavage 100.0 2.4E-28 5.2E-33 244.1 31.2 340 56-426 20-398 (398)
52 TIGR01366 serC_3 phosphoserine 100.0 9.2E-29 2E-33 242.3 27.5 330 64-433 9-361 (361)
53 PRK06108 aspartate aminotransf 100.0 5.1E-28 1.1E-32 240.5 32.2 333 57-431 25-381 (382)
54 TIGR01141 hisC histidinol-phos 100.0 2E-28 4.4E-33 240.1 28.7 317 56-427 19-346 (346)
55 PRK06207 aspartate aminotransf 100.0 7.6E-28 1.6E-32 240.2 33.2 340 52-434 35-404 (405)
56 PRK08960 hypothetical protein; 100.0 4.4E-28 9.4E-33 241.0 28.9 332 55-431 31-386 (387)
57 PLN02822 serine palmitoyltrans 100.0 4.3E-27 9.3E-32 238.2 34.3 334 59-434 110-479 (481)
58 PRK08361 aspartate aminotransf 100.0 6.1E-28 1.3E-32 240.3 27.4 330 57-432 34-390 (391)
59 PLN00175 aminotransferase fami 100.0 2.1E-27 4.6E-32 237.4 31.2 332 56-431 54-412 (413)
60 PRK07324 transaminase; Validat 100.0 6.4E-28 1.4E-32 238.2 27.0 292 102-432 63-370 (373)
61 PRK05764 aspartate aminotransf 100.0 2E-27 4.3E-32 237.0 30.4 330 56-433 31-392 (393)
62 COG0156 BioF 7-keto-8-aminopel 100.0 2.2E-27 4.7E-32 228.9 29.4 324 60-429 41-387 (388)
63 PLN00145 tyrosine/nicotianamin 100.0 4.2E-27 9.1E-32 236.1 32.4 338 55-435 51-427 (430)
64 PRK07682 hypothetical protein; 100.0 1.1E-27 2.4E-32 237.6 27.5 330 57-433 21-377 (378)
65 TIGR01437 selA_rel uncharacter 100.0 2.8E-27 6.1E-32 232.1 29.8 326 51-429 9-362 (363)
66 TIGR01821 5aminolev_synth 5-am 100.0 3.9E-27 8.4E-32 235.4 31.0 332 60-434 47-398 (402)
67 PRK09105 putative aminotransfe 100.0 5.2E-27 1.1E-31 231.3 31.3 316 55-430 42-368 (370)
68 PRK07681 aspartate aminotransf 100.0 3.1E-27 6.8E-32 235.8 30.0 326 56-428 32-384 (399)
69 PLN03026 histidinol-phosphate 100.0 4.8E-27 1E-31 232.5 30.3 316 56-428 52-378 (380)
70 PRK07568 aspartate aminotransf 100.0 1E-26 2.2E-31 232.3 32.6 334 56-434 30-394 (397)
71 PRK00950 histidinol-phosphate 100.0 2.9E-27 6.4E-32 233.2 28.1 318 56-430 34-360 (361)
72 PLN02187 rooty/superroot1 100.0 7E-27 1.5E-31 236.1 31.1 341 55-439 65-445 (462)
73 PRK03158 histidinol-phosphate 100.0 6.2E-27 1.3E-31 230.6 29.9 315 57-429 30-358 (359)
74 KOG1368 Threonine aldolase [Am 100.0 2.9E-28 6.2E-33 217.1 18.2 323 55-430 20-366 (384)
75 PRK05387 histidinol-phosphate 100.0 6.2E-27 1.3E-31 230.2 29.0 319 56-431 24-352 (353)
76 KOG2862 Alanine-glyoxylate ami 100.0 1.7E-26 3.7E-31 207.1 28.5 338 60-433 19-383 (385)
77 PRK01533 histidinol-phosphate 100.0 4.2E-27 9E-32 231.5 26.7 314 56-434 29-357 (366)
78 PRK06348 aspartate aminotransf 100.0 1.2E-26 2.7E-31 230.3 30.1 325 57-428 30-381 (384)
79 PRK02731 histidinol-phosphate 100.0 1.6E-26 3.4E-31 228.4 30.6 319 56-431 32-365 (367)
80 KOG0259 Tyrosine aminotransfer 100.0 1.6E-26 3.5E-31 212.7 28.1 340 57-434 62-435 (447)
81 TIGR03540 DapC_direct LL-diami 100.0 1.3E-26 2.7E-31 230.4 29.8 326 57-428 30-382 (383)
82 PRK13355 bifunctional HTH-doma 100.0 2.4E-26 5.1E-31 236.2 32.5 334 56-434 146-516 (517)
83 PRK07337 aminotransferase; Val 100.0 1.1E-26 2.5E-31 231.1 29.2 331 55-430 29-387 (388)
84 PRK04870 histidinol-phosphate 100.0 1.2E-26 2.6E-31 228.3 28.9 318 56-429 26-355 (356)
85 PRK08912 hypothetical protein; 100.0 1.1E-26 2.4E-31 231.1 28.9 331 57-432 27-386 (387)
86 PRK08133 O-succinylhomoserine 100.0 1.3E-26 2.8E-31 229.3 28.9 334 57-431 26-389 (390)
87 PRK14807 histidinol-phosphate 100.0 2E-26 4.3E-31 226.0 30.0 317 58-429 24-349 (351)
88 PRK13393 5-aminolevulinate syn 100.0 3.1E-26 6.7E-31 229.1 31.7 331 60-433 47-397 (406)
89 PLN02656 tyrosine transaminase 100.0 2E-26 4.3E-31 230.5 30.3 333 55-434 30-405 (409)
90 TIGR00858 bioF 8-amino-7-oxono 100.0 2.8E-26 6E-31 226.1 31.0 323 60-427 18-360 (360)
91 PRK13392 5-aminolevulinate syn 100.0 2.6E-26 5.5E-31 230.0 31.0 323 69-434 61-399 (410)
92 PRK09064 5-aminolevulinate syn 100.0 3.5E-26 7.7E-31 229.0 31.8 331 60-433 48-398 (407)
93 TIGR01265 tyr_nico_aTase tyros 100.0 3.2E-26 6.8E-31 228.8 31.2 335 55-433 30-402 (403)
94 PTZ00433 tyrosine aminotransfe 100.0 4.7E-26 1E-30 228.1 32.0 333 54-434 31-410 (412)
95 cd00378 SHMT Serine-glycine hy 100.0 1.1E-26 2.3E-31 232.5 27.4 338 63-434 25-387 (402)
96 PRK05958 8-amino-7-oxononanoat 100.0 4.1E-26 8.9E-31 227.1 31.4 328 57-429 38-384 (385)
97 PRK07309 aromatic amino acid a 100.0 2.1E-26 4.6E-31 229.1 29.1 332 56-434 30-390 (391)
98 PRK08134 O-acetylhomoserine am 100.0 4.1E-26 8.8E-31 227.3 30.9 319 93-436 56-431 (433)
99 PRK09276 LL-diaminopimelate am 100.0 2.9E-26 6.3E-31 227.9 29.4 325 57-427 32-383 (385)
100 PLN02721 threonine aldolase 100.0 1.6E-26 3.4E-31 227.3 27.2 322 59-432 8-352 (353)
101 PRK08363 alanine aminotransfer 100.0 4.4E-26 9.5E-31 227.6 30.5 333 56-432 30-394 (398)
102 PRK07366 succinyldiaminopimela 100.0 2.4E-26 5.3E-31 228.7 28.6 328 56-429 30-387 (388)
103 PRK05942 aspartate aminotransf 100.0 3.1E-26 6.8E-31 228.2 29.4 326 56-427 35-387 (394)
104 TIGR03537 DapC succinyldiamino 100.0 3.9E-26 8.4E-31 224.0 29.3 312 68-428 13-349 (350)
105 PTZ00377 alanine aminotransfer 100.0 8.7E-26 1.9E-30 230.1 32.9 330 63-434 83-477 (481)
106 PRK07683 aminotransferase A; V 100.0 4.8E-26 1E-30 226.3 29.8 330 56-432 28-383 (387)
107 PRK08153 histidinol-phosphate 100.0 8E-26 1.7E-30 223.1 31.0 319 58-434 34-367 (369)
108 PRK00451 glycine dehydrogenase 100.0 1.1E-25 2.4E-30 227.9 32.8 303 99-430 110-446 (447)
109 PRK06939 2-amino-3-ketobutyrat 100.0 1.1E-25 2.3E-30 225.0 32.2 319 69-433 57-394 (397)
110 COG0399 WecE Predicted pyridox 100.0 4.9E-26 1.1E-30 217.8 27.8 340 68-432 12-373 (374)
111 PLN02955 8-amino-7-oxononanoat 100.0 1.5E-25 3.3E-30 221.0 31.8 332 58-434 102-463 (476)
112 TIGR01264 tyr_amTase_E tyrosin 100.0 7.1E-26 1.5E-30 226.3 30.1 333 56-433 31-400 (401)
113 PRK04366 glycine dehydrogenase 100.0 2.9E-25 6.2E-30 225.3 34.8 347 59-435 71-451 (481)
114 PLN00143 tyrosine/nicotianamin 100.0 1E-25 2.2E-30 225.2 30.8 335 56-434 32-406 (409)
115 PRK08056 threonine-phosphate d 100.0 1.2E-25 2.6E-30 221.0 30.8 319 56-431 20-354 (356)
116 PRK07550 hypothetical protein; 100.0 6.3E-26 1.4E-30 225.6 29.2 328 57-429 30-384 (386)
117 PRK07908 hypothetical protein; 100.0 1.4E-25 3E-30 220.0 30.7 317 54-431 20-346 (349)
118 PRK09082 methionine aminotrans 100.0 1.1E-25 2.5E-30 223.6 30.2 332 56-428 30-385 (386)
119 PLN03227 serine palmitoyltrans 100.0 2.8E-25 6E-30 220.1 32.7 329 70-433 14-383 (392)
120 PRK08068 transaminase; Reviewe 100.0 1.1E-25 2.4E-30 224.0 29.7 327 56-428 32-385 (389)
121 TIGR01329 cysta_beta_ly_E cyst 100.0 1.1E-26 2.4E-31 228.8 21.9 301 100-433 46-376 (378)
122 PRK09147 succinyldiaminopimela 100.0 1E-25 2.3E-30 224.7 29.2 331 56-431 29-395 (396)
123 PRK09265 aminotransferase AlaT 100.0 2.9E-25 6.3E-30 222.0 32.3 335 56-434 33-403 (404)
124 PRK06107 aspartate aminotransf 99.9 2E-25 4.4E-30 222.8 31.1 333 57-433 34-401 (402)
125 PRK12414 putative aminotransfe 99.9 3.2E-25 7E-30 220.0 32.1 331 56-428 29-383 (384)
126 COG1168 MalY Bifunctional PLP- 99.9 1.9E-25 4.2E-30 207.3 28.3 325 68-433 38-387 (388)
127 PLN02452 phosphoserine transam 99.9 1.4E-25 3E-30 218.1 28.8 337 59-432 8-363 (365)
128 PRK06767 methionine gamma-lyas 99.9 4.6E-26 9.9E-31 225.4 25.9 306 95-432 55-385 (386)
129 cd00614 CGS_like CGS_like: Cys 99.9 3.4E-26 7.3E-31 225.4 24.5 306 93-430 32-368 (369)
130 PRK07504 O-succinylhomoserine 99.9 4.9E-26 1.1E-30 225.6 25.7 338 56-434 29-397 (398)
131 PLN02414 glycine dehydrogenase 99.9 4.2E-25 9.1E-30 235.0 34.3 308 98-435 565-910 (993)
132 KOG0257 Kynurenine aminotransf 99.9 1.6E-25 3.5E-30 209.9 27.4 267 61-347 36-335 (420)
133 TIGR01825 gly_Cac_T_rel pyrido 99.9 3.7E-25 7.9E-30 220.2 31.9 320 68-433 47-382 (385)
134 cd00616 AHBA_syn 3-amino-5-hyd 99.9 7.6E-26 1.6E-30 222.4 26.5 313 101-427 18-352 (352)
135 PRK11658 UDP-4-amino-4-deoxy-L 99.9 1.4E-25 3E-30 221.7 28.4 334 68-430 11-377 (379)
136 COG2008 GLY1 Threonine aldolas 99.9 4.1E-26 8.8E-31 211.5 22.9 322 59-430 2-341 (342)
137 PRK09148 aminotransferase; Val 99.9 2.2E-25 4.9E-30 222.6 30.0 335 56-436 30-394 (405)
138 PRK00011 glyA serine hydroxyme 99.9 1E-25 2.3E-30 226.2 27.7 342 56-432 25-389 (416)
139 PLN02263 serine decarboxylase 99.9 1.3E-24 2.8E-29 214.1 34.4 333 56-432 89-443 (470)
140 TIGR03538 DapC_gpp succinyldia 99.9 1.9E-25 4E-30 222.6 28.8 329 56-429 28-392 (393)
141 PRK15481 transcriptional regul 99.9 1E-25 2.2E-30 227.1 27.1 290 103-431 123-430 (431)
142 PRK03321 putative aminotransfe 99.9 1.5E-25 3.2E-30 220.2 27.4 314 57-431 23-350 (352)
143 PRK08861 cystathionine gamma-s 99.9 1.8E-25 4E-30 219.5 27.4 311 94-436 46-387 (388)
144 PRK08249 cystathionine gamma-s 99.9 3.9E-26 8.4E-31 225.9 22.6 310 93-434 56-395 (398)
145 TIGR01324 cysta_beta_ly_B cyst 99.9 2.1E-25 4.6E-30 218.9 27.5 306 94-432 43-376 (377)
146 PRK07777 aminotransferase; Val 99.9 6.1E-25 1.3E-29 218.5 31.2 334 57-430 25-384 (387)
147 PRK08114 cystathionine beta-ly 99.9 1.2E-25 2.5E-30 219.9 25.4 313 93-433 54-394 (395)
148 COG0079 HisC Histidinol-phosph 99.9 7E-25 1.5E-29 212.3 30.5 321 57-432 23-354 (356)
149 PRK06290 aspartate aminotransf 99.9 4.2E-25 9.1E-30 220.3 29.8 328 56-433 44-406 (410)
150 PRK05968 hypothetical protein; 99.9 1.5E-25 3.2E-30 221.7 26.2 308 94-433 56-387 (389)
151 PRK06836 aspartate aminotransf 99.9 7.5E-25 1.6E-29 218.2 31.2 330 58-433 35-392 (394)
152 PRK08636 aspartate aminotransf 99.9 5E-25 1.1E-29 220.1 29.9 331 57-433 34-401 (403)
153 PLN02242 methionine gamma-lyas 99.9 1.5E-25 3.3E-30 222.7 25.6 312 93-434 68-417 (418)
154 TIGR01328 met_gam_lyase methio 99.9 1.9E-25 4.2E-30 220.8 26.1 309 94-432 52-390 (391)
155 PRK05166 histidinol-phosphate 99.9 1E-24 2.3E-29 215.5 31.0 318 56-430 36-369 (371)
156 TIGR01325 O_suc_HS_sulf O-succ 99.9 2.5E-25 5.3E-30 219.7 26.5 300 99-430 52-380 (380)
157 cd00609 AAT_like Aspartate ami 99.9 2.3E-25 5E-30 218.4 26.0 291 101-428 36-350 (350)
158 PRK01688 histidinol-phosphate 99.9 2.5E-25 5.5E-30 218.1 25.9 281 103-427 59-351 (351)
159 cd06502 TA_like Low-specificit 99.9 1.5E-25 3.2E-30 219.1 24.2 309 66-428 7-337 (338)
160 PRK14809 histidinol-phosphate 99.9 9.1E-25 2E-29 214.9 29.8 314 56-431 30-356 (357)
161 PRK03317 histidinol-phosphate 99.9 1.1E-24 2.4E-29 215.3 30.1 319 57-431 27-363 (368)
162 PRK13580 serine hydroxymethylt 99.9 5.6E-25 1.2E-29 217.1 27.2 345 56-433 49-446 (493)
163 PRK02610 histidinol-phosphate 99.9 1.4E-24 3.1E-29 214.7 30.2 320 57-433 29-372 (374)
164 PLN03226 serine hydroxymethylt 99.9 2.7E-24 5.9E-29 216.3 32.5 343 63-433 40-420 (475)
165 PRK09028 cystathionine beta-ly 99.9 5E-25 1.1E-29 216.2 26.4 309 95-435 55-390 (394)
166 PRK08064 cystathionine beta-ly 99.9 2.1E-25 4.5E-30 220.7 23.9 306 94-428 47-382 (390)
167 COG3844 Kynureninase [Amino ac 99.9 1.8E-24 3.9E-29 195.4 27.3 354 48-433 22-403 (407)
168 PF00155 Aminotran_1_2: Aminot 99.9 6.5E-25 1.4E-29 216.7 27.0 285 101-426 44-363 (363)
169 PRK04635 histidinol-phosphate 99.9 6.9E-25 1.5E-29 215.4 27.0 280 103-429 62-352 (354)
170 PRK06234 methionine gamma-lyas 99.9 7.7E-25 1.7E-29 217.4 27.3 309 95-433 58-398 (400)
171 PRK06358 threonine-phosphate d 99.9 3.4E-24 7.4E-29 210.3 31.5 315 58-430 21-353 (354)
172 PRK06460 hypothetical protein; 99.9 1E-24 2.3E-29 214.7 27.4 309 93-433 37-375 (376)
173 PRK05613 O-acetylhomoserine am 99.9 1.4E-24 3E-29 216.2 28.2 316 93-432 61-436 (437)
174 PRK08776 cystathionine gamma-s 99.9 1.9E-24 4.1E-29 214.2 28.8 308 95-434 54-392 (405)
175 PRK08248 O-acetylhomoserine am 99.9 1.3E-24 2.7E-29 216.8 27.5 315 95-434 58-429 (431)
176 PRK07503 methionine gamma-lyas 99.9 1.5E-24 3.3E-29 215.3 27.8 313 94-436 58-400 (403)
177 PRK08574 cystathionine gamma-s 99.9 6.2E-25 1.3E-29 216.6 24.6 307 93-432 45-384 (385)
178 TIGR03799 NOD_PanD_pyr putativ 99.9 7.6E-24 1.6E-28 214.4 33.0 257 93-358 121-437 (522)
179 PRK07812 O-acetylhomoserine am 99.9 2.6E-24 5.6E-29 214.1 29.1 318 95-436 63-435 (436)
180 PRK08175 aminotransferase; Val 99.9 3.4E-24 7.4E-29 213.6 29.8 331 56-433 29-390 (395)
181 PLN02607 1-aminocyclopropane-1 99.9 1.6E-24 3.4E-29 217.7 27.5 349 53-439 44-444 (447)
182 PRK07810 O-succinylhomoserine 99.9 1.3E-24 2.8E-29 215.5 26.5 304 95-430 64-402 (403)
183 PLN02880 tyrosine decarboxylas 99.9 3.4E-24 7.5E-29 216.6 29.8 349 55-435 80-487 (490)
184 PRK13238 tnaA tryptophanase/L- 99.9 3.5E-24 7.6E-29 215.1 29.6 307 101-433 78-434 (460)
185 PLN02376 1-aminocyclopropane-1 99.9 6.2E-24 1.3E-28 215.8 31.6 341 55-436 45-442 (496)
186 PRK07811 cystathionine gamma-s 99.9 6.7E-25 1.5E-29 216.9 23.9 304 96-431 56-387 (388)
187 PRK07392 threonine-phosphate d 99.9 9.5E-24 2.1E-28 207.9 31.7 318 56-430 22-357 (360)
188 PLN02271 serine hydroxymethylt 99.9 7E-24 1.5E-28 209.8 29.8 341 63-431 154-539 (586)
189 TIGR02080 O_succ_thio_ly O-suc 99.9 2.2E-24 4.7E-29 212.5 26.2 305 96-432 46-381 (382)
190 PRK06855 aminotransferase; Val 99.9 4E-24 8.7E-29 215.1 28.7 333 58-432 34-429 (433)
191 TIGR01365 serC_2 phosphoserine 99.9 4.6E-24 9.9E-29 207.5 27.7 326 65-432 10-373 (374)
192 PLN02590 probable tyrosine dec 99.9 2.4E-23 5.2E-28 210.4 33.8 349 56-434 129-534 (539)
193 PRK08045 cystathionine gamma-s 99.9 3.2E-24 7E-29 211.4 26.7 308 94-433 45-383 (386)
194 PRK13034 serine hydroxymethylt 99.9 4.5E-24 9.8E-29 213.0 28.0 337 63-434 34-394 (416)
195 COG4992 ArgD Ornithine/acetylo 99.9 1.1E-23 2.4E-28 199.2 29.0 338 50-435 34-401 (404)
196 PRK05939 hypothetical protein; 99.9 3.2E-24 7E-29 212.0 26.5 314 93-431 39-395 (397)
197 PLN02450 1-aminocyclopropane-1 99.9 4.2E-24 9E-29 216.3 27.3 342 55-434 37-432 (468)
198 PRK07050 cystathionine beta-ly 99.9 2.3E-24 4.9E-29 213.2 24.4 309 93-433 57-392 (394)
199 PRK12462 phosphoserine aminotr 99.9 1.8E-23 3.8E-28 201.1 29.8 335 60-432 6-362 (364)
200 COG0076 GadB Glutamate decarbo 99.9 9.6E-24 2.1E-28 209.9 28.9 292 56-359 61-380 (460)
201 TIGR02379 ECA_wecE TDP-4-keto- 99.9 1.5E-23 3.2E-28 206.3 29.5 332 68-430 8-375 (376)
202 PRK06176 cystathionine gamma-s 99.9 1.1E-24 2.3E-29 214.5 21.2 307 94-433 43-379 (380)
203 KOG1360 5-aminolevulinate synt 99.9 3.6E-24 7.9E-29 197.9 22.8 325 68-434 185-526 (570)
204 PRK10534 L-threonine aldolase; 99.9 6E-24 1.3E-28 207.2 25.6 310 59-431 2-332 (333)
205 TIGR03588 PseC UDP-4-keto-6-de 99.9 1.3E-23 2.9E-28 208.3 27.8 337 68-430 7-380 (380)
206 PRK03967 histidinol-phosphate 99.9 1.9E-23 4.2E-28 203.6 28.1 309 56-432 18-334 (337)
207 PRK08247 cystathionine gamma-s 99.9 7.9E-24 1.7E-28 208.1 25.3 305 93-432 44-364 (366)
208 PRK05839 hypothetical protein; 99.9 5.6E-23 1.2E-27 203.2 31.2 324 57-431 25-373 (374)
209 PRK07590 L,L-diaminopimelate a 99.9 1.8E-23 3.8E-28 209.4 27.5 334 56-429 34-408 (409)
210 PLN02231 alanine transaminase 99.9 7.8E-23 1.7E-27 208.9 32.1 327 67-434 139-529 (534)
211 PRK05994 O-acetylhomoserine am 99.9 2.4E-23 5.2E-28 207.9 27.7 308 100-432 62-426 (427)
212 PRK05967 cystathionine beta-ly 99.9 1.4E-23 3.1E-28 205.5 25.2 307 94-433 57-392 (395)
213 COG1167 ARO8 Transcriptional r 99.9 1.1E-22 2.4E-27 204.8 32.2 299 102-434 133-457 (459)
214 PRK07865 N-succinyldiaminopime 99.9 2.6E-23 5.6E-28 205.2 27.2 310 57-427 28-363 (364)
215 PRK07671 cystathionine beta-ly 99.9 2.3E-23 4.9E-28 205.1 26.4 304 94-430 43-376 (377)
216 PRK03244 argD acetylornithine 99.9 2E-22 4.3E-27 201.3 33.6 327 56-434 41-396 (398)
217 PRK06084 O-acetylhomoserine am 99.9 1.8E-23 3.9E-28 208.3 25.9 316 94-434 51-424 (425)
218 TIGR03542 DAPAT_plant LL-diami 99.9 3.5E-23 7.6E-28 206.8 28.1 335 56-429 33-401 (402)
219 TIGR01140 L_thr_O3P_dcar L-thr 99.9 2.6E-23 5.6E-28 202.2 26.3 270 103-426 49-329 (330)
220 PRK04781 histidinol-phosphate 99.9 4.9E-23 1.1E-27 202.8 28.5 285 103-430 61-361 (364)
221 COG2873 MET17 O-acetylhomoseri 99.9 5.8E-23 1.3E-27 189.4 26.5 342 57-432 27-425 (426)
222 TIGR03576 pyridox_MJ0158 pyrid 99.9 2.2E-23 4.8E-28 202.6 25.3 303 59-430 28-345 (346)
223 PRK05367 glycine dehydrogenase 99.9 3.7E-22 7.9E-27 213.8 36.5 350 51-435 494-878 (954)
224 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 7.9E-23 1.7E-27 204.2 29.5 311 95-430 51-417 (418)
225 PRK06702 O-acetylhomoserine am 99.9 4.5E-23 9.8E-28 204.0 27.3 309 100-432 60-424 (432)
226 PLN02509 cystathionine beta-ly 99.9 3.1E-23 6.6E-28 207.1 26.2 304 95-431 127-460 (464)
227 PRK06425 histidinol-phosphate 99.9 3.6E-23 7.9E-28 201.3 26.3 278 102-430 41-331 (332)
228 PRK14808 histidinol-phosphate 99.9 5.3E-23 1.1E-27 200.2 27.1 304 56-428 19-333 (335)
229 PF01041 DegT_DnrJ_EryC1: DegT 99.9 2.3E-23 5E-28 205.0 24.3 332 70-427 4-363 (363)
230 PRK04073 rocD ornithine--oxo-a 99.9 2.6E-22 5.5E-27 200.1 31.8 324 55-430 37-395 (396)
231 PRK07505 hypothetical protein; 99.9 4.1E-22 8.8E-27 199.1 33.3 336 55-432 43-399 (402)
232 TIGR03539 DapC_actino succinyl 99.9 7.9E-23 1.7E-27 201.0 27.4 308 58-426 23-356 (357)
233 PLN02672 methionine S-methyltr 99.9 3.3E-22 7.2E-27 213.4 33.8 326 56-432 697-1080(1082)
234 PRK00854 rocD ornithine--oxo-a 99.9 3.2E-22 6.9E-27 200.0 31.8 324 57-431 40-400 (401)
235 PRK04311 selenocysteine syntha 99.9 4.4E-22 9.6E-27 198.8 32.5 339 47-431 76-463 (464)
236 PRK07269 cystathionine gamma-s 99.9 4.4E-23 9.5E-28 201.8 24.1 300 94-431 47-363 (364)
237 PRK01278 argD acetylornithine 99.9 4.7E-22 1E-26 197.9 31.9 327 56-432 29-388 (389)
238 PRK09440 avtA valine--pyruvate 99.9 1.1E-22 2.5E-27 204.2 27.6 307 103-436 76-415 (416)
239 PF01053 Cys_Met_Meta_PP: Cys/ 99.9 1E-22 2.2E-27 198.9 25.6 308 92-431 46-386 (386)
240 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 3.1E-22 6.7E-27 197.8 29.2 334 68-430 8-374 (375)
241 PRK07049 methionine gamma-lyas 99.9 1.2E-22 2.6E-27 202.8 26.1 306 95-431 77-425 (427)
242 cd00617 Tnase_like Tryptophana 99.9 2.2E-22 4.7E-27 199.4 27.5 304 101-437 53-413 (431)
243 TIGR00474 selA seryl-tRNA(sec) 99.9 9.9E-22 2.2E-26 195.7 32.3 270 47-335 71-370 (454)
244 PLN02414 glycine dehydrogenase 99.9 4.7E-22 1E-26 211.9 30.9 329 56-428 100-465 (993)
245 PRK15407 lipopolysaccharide bi 99.9 6E-22 1.3E-26 198.2 29.0 341 68-431 41-435 (438)
246 cd00610 OAT_like Acetyl ornith 99.9 7.8E-22 1.7E-26 198.2 30.0 330 57-430 35-413 (413)
247 PRK12566 glycine dehydrogenase 99.9 5.4E-22 1.2E-26 207.4 29.3 312 96-434 538-878 (954)
248 TIGR00461 gcvP glycine dehydro 99.9 2.9E-21 6.3E-26 203.3 34.5 348 59-435 488-870 (939)
249 TIGR03246 arg_catab_astC succi 99.9 5.1E-21 1.1E-25 190.5 34.4 328 56-433 33-396 (397)
250 PRK08354 putative aminotransfe 99.9 4E-21 8.7E-26 185.2 32.0 295 56-429 8-309 (311)
251 PRK07582 cystathionine gamma-l 99.9 2.4E-22 5.3E-27 197.3 23.8 297 95-432 45-365 (366)
252 cd00615 Orn_deC_like Ornithine 99.9 5.3E-23 1.2E-27 196.5 17.9 219 101-334 59-293 (294)
253 PTZ00125 ornithine aminotransf 99.9 1.9E-21 4.1E-26 194.5 29.7 327 57-435 30-398 (400)
254 COG1103 Archaea-specific pyrid 99.9 8.7E-22 1.9E-26 173.6 22.7 347 56-433 15-381 (382)
255 TIGR03531 selenium_SpcS O-phos 99.9 2.7E-22 5.9E-27 198.1 21.8 311 100-430 104-444 (444)
256 TIGR00707 argD acetylornithine 99.9 6.6E-21 1.4E-25 189.2 31.8 322 59-429 28-378 (379)
257 PRK05367 glycine dehydrogenase 99.9 2.9E-21 6.2E-26 206.9 30.9 291 96-427 116-437 (954)
258 PRK09275 aspartate aminotransf 99.9 1.6E-21 3.5E-26 196.6 27.2 291 119-435 162-520 (527)
259 COG0112 GlyA Glycine/serine hy 99.9 1.9E-21 4.1E-26 181.4 24.6 338 63-434 32-392 (413)
260 PRK09257 aromatic amino acid a 99.9 2.3E-21 5E-26 193.3 26.3 322 57-429 27-395 (396)
261 COG0626 MetC Cystathionine bet 99.9 5E-21 1.1E-25 184.5 27.1 311 92-433 54-395 (396)
262 PRK06959 putative threonine-ph 99.9 3.2E-21 7E-26 187.9 26.1 272 104-437 56-338 (339)
263 PRK05093 argD bifunctional N-s 99.9 1.5E-20 3.2E-25 187.9 31.4 328 56-433 38-401 (403)
264 PF00282 Pyridoxal_deC: Pyrido 99.9 8.7E-21 1.9E-25 185.7 27.9 290 57-358 39-372 (373)
265 TIGR03801 asp_4_decarbox aspar 99.9 6.3E-21 1.4E-25 192.1 27.3 344 56-435 94-519 (521)
266 PTZ00376 aspartate aminotransf 99.9 4.9E-21 1.1E-25 191.4 26.3 328 57-431 30-402 (404)
267 PRK02627 acetylornithine amino 99.9 7.6E-20 1.6E-24 182.7 34.7 327 57-433 38-395 (396)
268 PRK05664 threonine-phosphate d 99.9 1E-20 2.3E-25 183.8 26.7 267 104-432 52-328 (330)
269 PRK08637 hypothetical protein; 99.9 6.7E-21 1.4E-25 189.5 25.8 297 101-434 44-388 (388)
270 KOG1359 Glycine C-acetyltransf 99.9 6.7E-21 1.4E-25 169.8 22.8 317 69-434 82-414 (417)
271 PRK06434 cystathionine gamma-l 99.9 5.2E-21 1.1E-25 187.4 24.2 302 93-431 56-383 (384)
272 PRK03715 argD acetylornithine 99.9 7.1E-20 1.5E-24 181.5 32.5 329 56-433 34-394 (395)
273 TIGR01885 Orn_aminotrans ornit 99.9 2.8E-20 6.1E-25 185.8 29.3 323 57-430 36-400 (401)
274 PRK02936 argD acetylornithine 99.9 7.3E-20 1.6E-24 181.5 32.0 319 57-430 28-377 (377)
275 PRK12381 bifunctional succinyl 99.9 9.9E-20 2.2E-24 181.8 31.1 330 56-435 37-402 (406)
276 PLN02624 ornithine-delta-amino 99.9 5.7E-20 1.2E-24 186.1 28.6 325 56-432 73-444 (474)
277 PRK05964 adenosylmethionine--8 99.9 9.3E-20 2E-24 182.9 29.3 339 56-433 40-423 (423)
278 PLN02368 alanine transaminase 99.9 5.4E-20 1.2E-24 182.5 27.1 228 102-344 108-384 (407)
279 PRK04260 acetylornithine amino 99.9 5.3E-19 1.1E-23 175.1 32.8 323 56-429 27-374 (375)
280 COG0160 GabT 4-aminobutyrate a 99.9 7.2E-19 1.6E-23 171.7 32.7 338 55-433 53-446 (447)
281 KOG0053 Cystathionine beta-lya 99.9 2.4E-20 5.2E-25 177.3 19.6 302 100-433 76-407 (409)
282 TIGR03811 tyr_de_CO2_Ent tyros 99.9 1.4E-18 3E-23 177.6 33.9 363 59-432 85-602 (608)
283 PRK11522 putrescine--2-oxoglut 99.9 3.9E-19 8.4E-24 178.7 29.3 339 55-435 79-454 (459)
284 PF00464 SHMT: Serine hydroxym 99.9 2E-20 4.4E-25 181.1 18.6 329 64-426 27-399 (399)
285 cd01494 AAT_I Aspartate aminot 99.9 2.9E-20 6.2E-25 162.6 17.4 162 103-271 2-170 (170)
286 PLN00144 acetylornithine trans 99.9 8.2E-19 1.8E-23 173.4 29.4 324 56-433 13-381 (382)
287 PLN02760 4-aminobutyrate:pyruv 99.9 1.2E-18 2.5E-23 176.9 30.9 343 56-434 87-493 (504)
288 PRK08117 4-aminobutyrate amino 99.8 1.6E-18 3.4E-23 174.5 30.0 337 56-433 41-430 (433)
289 TIGR02618 tyr_phenol_ly tyrosi 99.8 2.1E-18 4.6E-23 168.3 28.8 302 101-437 71-431 (450)
290 TIGR03372 putres_am_tran putre 99.8 5.8E-18 1.2E-22 169.1 31.4 329 53-430 70-442 (442)
291 PRK13360 omega amino acid--pyr 99.8 4.4E-18 9.4E-23 170.8 30.5 342 55-433 43-441 (442)
292 COG1932 SerC Phosphoserine ami 99.8 1.5E-18 3.2E-23 161.2 24.7 333 63-433 10-364 (365)
293 PLN02397 aspartate transaminas 99.8 1.2E-18 2.6E-23 174.7 26.2 284 101-431 91-420 (423)
294 COG1003 GcvP Glycine cleavage 99.8 4.7E-18 1E-22 159.9 28.0 311 98-436 106-451 (496)
295 PRK09221 beta alanine--pyruvat 99.8 9.2E-18 2E-22 168.6 31.4 342 55-433 46-444 (445)
296 KOG0256 1-aminocyclopropane-1- 99.8 1E-18 2.3E-23 162.9 22.3 294 101-431 121-460 (471)
297 PRK06541 hypothetical protein; 99.8 1.3E-17 2.9E-22 168.0 31.6 345 55-435 49-458 (460)
298 PRK06105 aminotransferase; Pro 99.8 5.6E-18 1.2E-22 170.9 28.5 344 55-435 45-452 (460)
299 PRK08360 4-aminobutyrate amino 99.8 3.2E-17 7E-22 164.6 33.4 338 55-435 38-429 (443)
300 PRK07495 4-aminobutyrate amino 99.8 3.7E-17 8.1E-22 163.4 33.6 336 55-435 37-424 (425)
301 PRK13237 tyrosine phenol-lyase 99.8 7.9E-18 1.7E-22 164.7 27.9 303 101-437 78-438 (460)
302 PRK06062 hypothetical protein; 99.8 1.5E-17 3.2E-22 167.4 30.8 335 55-436 50-449 (451)
303 PRK06058 4-aminobutyrate amino 99.8 3.8E-17 8.3E-22 164.6 33.0 339 53-433 51-443 (443)
304 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 3.2E-19 6.9E-24 173.5 17.0 230 101-346 66-329 (417)
305 PRK07678 aminotransferase; Val 99.8 1.9E-17 4.1E-22 166.8 30.1 350 54-434 43-451 (451)
306 PRK08593 4-aminobutyrate amino 99.8 4.5E-17 9.8E-22 163.8 32.7 337 55-434 39-431 (445)
307 TIGR00713 hemL glutamate-1-sem 99.8 1.3E-17 2.8E-22 167.8 28.7 323 55-432 45-422 (423)
308 PRK04612 argD acetylornithine 99.8 1.7E-17 3.8E-22 164.9 29.1 332 54-433 36-404 (408)
309 PRK15029 arginine decarboxylas 99.8 5.6E-18 1.2E-22 176.3 26.5 223 101-339 205-466 (755)
310 PRK05965 hypothetical protein; 99.8 2.2E-17 4.8E-22 166.5 29.9 346 53-433 41-448 (459)
311 PRK12403 putative aminotransfe 99.8 4E-17 8.7E-22 164.7 31.8 340 55-433 51-453 (460)
312 KOG1358 Serine palmitoyltransf 99.8 3.3E-18 7.1E-23 158.6 21.7 332 60-432 96-465 (467)
313 PRK06173 adenosylmethionine--8 99.8 3.1E-17 6.8E-22 163.9 30.6 341 55-433 41-426 (429)
314 PRK05639 4-aminobutyrate amino 99.8 9.4E-17 2E-21 161.6 34.2 350 55-455 50-457 (457)
315 KOG1383 Glutamate decarboxylas 99.8 1.4E-17 3.1E-22 158.1 26.3 312 99-437 118-451 (491)
316 PRK07986 adenosylmethionine--8 99.8 2.4E-17 5.3E-22 164.4 29.0 340 55-432 40-423 (428)
317 TIGR02407 ectoine_ectB diamino 99.8 9.2E-17 2E-21 160.3 33.1 334 55-432 32-412 (412)
318 PRK04013 argD acetylornithine/ 99.8 8.1E-17 1.8E-21 157.1 31.8 313 56-433 22-361 (364)
319 PRK07482 hypothetical protein; 99.8 2.4E-17 5.2E-22 166.3 28.7 344 53-433 45-455 (461)
320 PRK09264 diaminobutyrate--2-ox 99.8 8E-17 1.7E-21 161.5 32.1 335 55-433 36-417 (425)
321 PRK06943 adenosylmethionine--8 99.8 6.2E-17 1.3E-21 162.8 31.1 340 55-433 51-447 (453)
322 TIGR00700 GABAtrnsam 4-aminobu 99.8 1.5E-16 3.2E-21 159.5 33.7 333 55-431 30-419 (420)
323 PRK09792 4-aminobutyrate trans 99.8 4.7E-17 1E-21 162.9 29.9 334 54-431 36-420 (421)
324 PRK05630 adenosylmethionine--8 99.8 4.6E-17 1E-21 162.4 29.5 341 54-431 36-419 (422)
325 PRK06777 4-aminobutyrate amino 99.8 1.8E-16 4E-21 158.6 32.8 333 55-431 37-420 (421)
326 PRK06916 adenosylmethionine--8 99.8 9E-17 1.9E-21 162.1 30.8 343 55-434 53-457 (460)
327 PRK06082 4-aminobutyrate amino 99.8 1.8E-16 3.8E-21 159.8 32.7 334 56-433 70-452 (459)
328 PRK07030 adenosylmethionine--8 99.8 1.4E-16 2.9E-21 160.8 31.5 341 55-433 44-447 (466)
329 TIGR00461 gcvP glycine dehydro 99.8 8.8E-17 1.9E-21 169.7 31.1 292 96-427 104-426 (939)
330 PRK07480 putative aminotransfe 99.8 6.4E-17 1.4E-21 162.9 28.9 343 55-435 47-451 (456)
331 PRK08742 adenosylmethionine--8 99.8 1.3E-16 2.9E-21 160.8 30.9 342 55-433 61-468 (472)
332 PRK05769 4-aminobutyrate amino 99.8 3.6E-16 7.8E-21 157.1 34.0 333 55-433 51-440 (441)
333 KOG0634 Aromatic amino acid am 99.8 4.2E-17 9E-22 153.5 24.8 303 101-434 100-468 (472)
334 PRK13578 ornithine decarboxyla 99.8 3.3E-17 7.1E-22 168.9 26.3 324 101-441 174-574 (720)
335 PRK06918 4-aminobutyrate amino 99.8 2.5E-16 5.5E-21 159.1 32.0 336 55-434 51-445 (451)
336 PRK08088 4-aminobutyrate amino 99.8 1.6E-16 3.4E-21 159.7 30.0 335 55-433 38-424 (425)
337 PRK07036 hypothetical protein; 99.8 2.5E-16 5.4E-21 159.0 30.8 342 55-433 48-453 (466)
338 COG3977 Alanine-alpha-ketoisov 99.8 4.9E-17 1.1E-21 145.8 22.2 352 56-437 30-416 (417)
339 KOG1402 Ornithine aminotransfe 99.8 1E-16 2.2E-21 145.5 24.5 328 53-431 54-426 (427)
340 PF01212 Beta_elim_lyase: Beta 99.8 8.7E-20 1.9E-24 171.8 4.9 247 69-340 7-273 (290)
341 TIGR00709 dat 2,4-diaminobutyr 99.8 4.3E-16 9.4E-21 156.8 31.7 337 55-433 36-436 (442)
342 PRK07483 hypothetical protein; 99.8 4.8E-16 1E-20 156.1 31.8 348 54-435 26-440 (443)
343 PRK07481 hypothetical protein; 99.8 3.1E-16 6.7E-21 157.9 30.1 343 55-433 39-446 (449)
344 PRK12389 glutamate-1-semialdeh 99.8 2.7E-16 5.9E-21 157.7 28.8 323 55-432 50-427 (428)
345 PRK06938 diaminobutyrate--2-ox 99.8 1.1E-15 2.4E-20 154.1 32.4 337 55-433 60-461 (464)
346 PRK07046 aminotransferase; Val 99.8 1.7E-15 3.6E-20 152.4 33.0 326 55-434 72-452 (453)
347 TIGR00508 bioA adenosylmethion 99.8 5.7E-16 1.2E-20 155.1 29.4 339 56-432 43-426 (427)
348 COG0161 BioA Adenosylmethionin 99.8 8.3E-17 1.8E-21 156.3 22.1 330 67-434 59-445 (449)
349 PRK00615 glutamate-1-semialdeh 99.8 8.8E-16 1.9E-20 153.3 29.8 332 55-435 50-431 (433)
350 PRK00062 glutamate-1-semialdeh 99.8 8.8E-16 1.9E-20 154.1 29.8 325 56-433 48-425 (426)
351 PRK06917 hypothetical protein; 99.8 1.4E-15 3.1E-20 152.8 31.1 346 55-433 28-438 (447)
352 KOG3846 L-kynurenine hydrolase 99.8 2.4E-16 5.2E-21 141.8 22.0 356 53-434 63-463 (465)
353 COG0001 HemL Glutamate-1-semia 99.8 2E-15 4.3E-20 145.0 29.2 325 56-435 51-431 (432)
354 PLN02482 glutamate-1-semialdeh 99.7 9E-16 1.9E-20 154.6 27.4 323 55-432 96-473 (474)
355 TIGR00699 GABAtrns_euk 4-amino 99.7 2.6E-15 5.6E-20 150.3 29.2 334 55-430 55-464 (464)
356 PRK06149 hypothetical protein; 99.7 2.4E-15 5.2E-20 164.6 31.5 333 56-432 583-970 (972)
357 PRK15399 lysine decarboxylase 99.7 2.2E-15 4.8E-20 155.3 28.9 323 101-442 195-569 (713)
358 PRK06148 hypothetical protein; 99.7 2.2E-15 4.8E-20 164.9 29.7 339 53-433 619-1011(1013)
359 TIGR02617 tnaA_trp_ase tryptop 99.7 1.8E-15 4E-20 146.3 25.5 346 56-437 41-446 (467)
360 PRK15400 lysine decarboxylase 99.7 8.2E-16 1.8E-20 158.5 24.6 321 101-440 195-567 (714)
361 PRK06931 diaminobutyrate--2-ox 99.7 8.5E-15 1.8E-19 147.7 30.9 334 55-433 55-455 (459)
362 PRK08297 L-lysine aminotransfe 99.7 3.8E-15 8.3E-20 149.6 28.2 336 56-433 43-442 (443)
363 PF02347 GDC-P: Glycine cleava 99.7 6.9E-15 1.5E-19 143.2 28.4 291 96-426 105-429 (429)
364 TIGR03251 LAT_fam L-lysine 6-t 99.7 2.7E-14 5.9E-19 143.3 31.3 332 57-428 37-430 (431)
365 KOG1404 Alanine-glyoxylate ami 99.7 7.3E-15 1.6E-19 136.8 22.9 336 48-426 40-432 (442)
366 KOG0633 Histidinol phosphate a 99.7 2.2E-15 4.8E-20 132.6 14.3 285 105-429 73-374 (375)
367 KOG2467 Glycine/serine hydroxy 99.7 1.3E-13 2.8E-18 127.2 26.0 342 63-433 46-427 (477)
368 COG0403 GcvP Glycine cleavage 99.6 2.7E-13 5.9E-18 128.3 28.5 299 98-429 117-447 (450)
369 PRK06209 glutamate-1-semialdeh 99.6 7.2E-14 1.6E-18 140.3 25.3 258 55-335 45-328 (431)
370 COG1982 LdcC Arginine/lysine/o 99.6 5E-14 1.1E-18 139.8 23.4 310 101-451 70-423 (557)
371 KOG1401 Acetylornithine aminot 99.6 3.6E-13 7.8E-18 126.6 24.1 248 68-335 72-351 (433)
372 PLN02974 adenosylmethionine-8- 99.6 4.2E-13 9.2E-18 142.1 27.6 334 59-430 366-816 (817)
373 COG1448 TyrB Aspartate/tyrosin 99.6 4.8E-13 1E-17 125.2 23.1 325 54-429 30-395 (396)
374 KOG0629 Glutamate decarboxylas 99.6 1.2E-13 2.7E-18 129.8 18.6 309 102-430 142-507 (510)
375 PF00202 Aminotran_3: Aminotra 99.6 6.5E-13 1.4E-17 129.2 23.8 258 56-335 14-315 (339)
376 PF03841 SelA: L-seryl-tRNA se 99.6 2E-15 4.4E-20 142.2 5.4 252 65-335 14-295 (367)
377 PF12897 Aminotran_MocR: Alani 99.6 4.6E-13 1E-17 125.6 20.5 303 98-432 66-415 (425)
378 COG1921 SelA Selenocysteine sy 99.6 2.4E-13 5.2E-18 129.3 18.3 240 50-313 20-271 (395)
379 PF06838 Met_gamma_lyase: Meth 99.5 2E-12 4.4E-17 120.5 20.6 277 72-371 28-328 (403)
380 PRK12566 glycine dehydrogenase 99.5 1.8E-11 3.8E-16 129.2 28.9 288 96-427 119-439 (954)
381 KOG0628 Aromatic-L-amino-acid/ 99.5 3.1E-11 6.7E-16 115.1 25.9 312 98-436 106-475 (511)
382 KOG0258 Alanine aminotransfera 99.5 2.8E-11 6E-16 113.0 24.8 259 69-345 87-390 (475)
383 KOG2040 Glycine dehydrogenase 99.4 3.2E-11 7E-16 118.8 23.0 307 99-435 580-921 (1001)
384 KOG2790 Phosphoserine aminotra 99.4 4.2E-11 9.1E-16 107.1 21.1 340 57-432 7-368 (370)
385 PF05889 SLA_LP_auto_ag: Solub 99.4 2.5E-12 5.3E-17 122.4 14.2 301 101-431 56-389 (389)
386 COG3033 TnaA Tryptophanase [Am 99.3 2.3E-09 5E-14 99.3 22.3 342 65-438 56-450 (471)
387 KOG1403 Predicted alanine-glyo 99.2 1E-09 2.2E-14 99.1 17.6 343 50-435 39-440 (452)
388 COG4100 Cystathionine beta-lya 99.1 6.9E-09 1.5E-13 93.9 15.4 172 102-278 66-256 (416)
389 KOG2040 Glycine dehydrogenase 99.0 3E-08 6.5E-13 98.3 17.3 301 85-427 141-478 (1001)
390 KOG1412 Aspartate aminotransfe 98.9 1.5E-07 3.2E-12 85.9 18.4 275 121-435 102-408 (410)
391 PF04864 Alliinase_C: Allinase 98.9 9.2E-08 2E-12 89.2 15.8 283 102-428 47-361 (363)
392 KOG1405 4-aminobutyrate aminot 98.4 6.1E-06 1.3E-10 76.8 12.9 207 185-432 254-483 (484)
393 KOG3843 Predicted serine hydro 98.1 9E-06 1.9E-10 72.8 7.7 178 101-284 57-253 (432)
394 KOG1411 Aspartate aminotransfe 98.0 0.00013 2.8E-09 68.0 12.6 325 59-431 61-424 (427)
395 PLN02994 1-aminocyclopropane-1 97.4 0.0011 2.4E-08 56.3 8.7 54 101-158 96-153 (153)
396 KOG2142 Molybdenum cofactor su 96.6 0.0064 1.4E-07 61.5 7.5 354 60-430 23-429 (728)
397 KOG1465 Translation initiation 79.2 57 0.0012 30.7 13.8 115 106-233 152-271 (353)
398 COG1184 GCD2 Translation initi 72.6 89 0.0019 29.7 13.1 101 118-232 119-227 (301)
399 KOG0630 Predicted pyridoxal-de 69.6 99 0.0022 31.3 12.2 186 147-345 232-441 (838)
400 PF01008 IF-2B: Initiation fac 68.0 95 0.002 29.2 11.9 104 118-233 107-217 (282)
401 PRK08535 translation initiatio 67.2 1.2E+02 0.0026 29.1 14.8 102 119-232 121-228 (310)
402 PF05368 NmrA: NmrA-like famil 65.9 45 0.00097 30.1 9.1 63 163-231 37-99 (233)
403 KOG2142 Molybdenum cofactor su 64.7 4.4 9.5E-05 41.9 2.1 164 106-275 181-363 (728)
404 TIGR00511 ribulose_e2b2 ribose 61.8 1.5E+02 0.0033 28.3 15.2 102 119-232 116-223 (301)
405 TIGR00524 eIF-2B_rel eIF-2B al 60.9 1.6E+02 0.0034 28.2 13.6 104 119-232 119-237 (303)
406 COG1954 GlpP Glycerol-3-phosph 58.6 16 0.00035 31.3 4.1 50 185-239 12-63 (181)
407 COG1504 Uncharacterized conser 57.7 24 0.00052 27.7 4.6 50 182-233 47-96 (121)
408 COG0656 ARA1 Aldo/keto reducta 56.4 1.5E+02 0.0032 28.0 10.6 142 73-230 30-187 (280)
409 PF04309 G3P_antiterm: Glycero 56.3 5.4 0.00012 34.6 1.0 52 185-241 8-61 (175)
410 cd02070 corrinoid_protein_B12- 54.7 1.5E+02 0.0033 26.2 10.2 125 101-233 33-172 (201)
411 smart00642 Aamy Alpha-amylase 53.3 28 0.00061 29.9 5.0 73 158-235 20-92 (166)
412 KOG1467 Translation initiation 53.2 2.6E+02 0.0057 28.4 13.2 106 117-232 358-467 (556)
413 cd02072 Glm_B12_BD B12 binding 52.5 44 0.00096 27.4 5.7 57 165-227 22-79 (128)
414 PRK13396 3-deoxy-7-phosphohept 52.4 2.4E+02 0.0051 27.6 13.0 120 107-241 157-286 (352)
415 PF02310 B12-binding: B12 bind 51.3 66 0.0014 25.5 6.7 68 163-236 21-91 (121)
416 COG0159 TrpA Tryptophan syntha 50.7 2.1E+02 0.0046 26.7 16.5 81 146-229 123-208 (265)
417 TIGR03573 WbuX N-acetyl sugar 49.8 2.6E+02 0.0055 27.3 11.7 124 102-236 41-170 (343)
418 TIGR03772 anch_rpt_subst ancho 49.1 1.6E+02 0.0034 30.3 10.2 74 145-229 370-448 (479)
419 TIGR01501 MthylAspMutase methy 49.1 52 0.0011 27.2 5.7 58 164-227 23-81 (134)
420 CHL00200 trpA tryptophan synth 48.9 2.3E+02 0.005 26.5 16.0 84 146-232 120-208 (263)
421 COG2515 Acd 1-aminocyclopropan 48.4 1.9E+02 0.0041 27.6 9.7 122 101-224 47-177 (323)
422 PRK10886 DnaA initiator-associ 48.0 95 0.0021 27.5 7.6 41 187-231 101-141 (196)
423 TIGR02990 ectoine_eutA ectoine 47.3 2.3E+02 0.005 26.0 10.6 95 127-231 107-211 (239)
424 COG3019 Predicted metal-bindin 47.0 1.6E+02 0.0034 24.5 7.8 73 145-226 25-104 (149)
425 COG2515 Acd 1-aminocyclopropan 45.7 1.6E+02 0.0036 27.9 8.9 36 97-134 162-199 (323)
426 PRK05096 guanosine 5'-monophos 44.9 1.4E+02 0.003 28.9 8.5 109 121-234 99-221 (346)
427 COG1908 FrhD Coenzyme F420-red 44.5 59 0.0013 26.1 4.9 42 391-439 86-127 (132)
428 TIGR03600 phage_DnaB phage rep 44.5 2.1E+02 0.0045 28.7 10.5 17 145-161 222-238 (421)
429 cd02067 B12-binding B12 bindin 43.6 1.1E+02 0.0024 24.2 6.9 66 163-234 20-89 (119)
430 PF00290 Trp_syntA: Tryptophan 42.5 2.9E+02 0.0062 25.8 15.7 157 55-230 37-202 (259)
431 COG1105 FruK Fructose-1-phosph 41.8 1.7E+02 0.0037 28.0 8.6 36 199-235 132-168 (310)
432 PF13460 NAD_binding_10: NADH( 41.7 1.6E+02 0.0035 25.0 8.2 52 169-227 39-90 (183)
433 KOG0352 ATP-dependent DNA heli 41.4 1.9E+02 0.0042 28.9 8.9 54 194-253 111-166 (641)
434 COG0108 RibB 3,4-dihydroxy-2-b 41.3 63 0.0014 28.6 5.2 37 194-231 154-190 (203)
435 TIGR00640 acid_CoA_mut_C methy 41.0 92 0.002 25.6 6.0 56 164-225 24-80 (132)
436 PRK08335 translation initiatio 40.6 3.2E+02 0.0069 25.7 15.5 111 108-231 101-216 (275)
437 PRK02261 methylaspartate mutas 40.5 2.1E+02 0.0046 23.6 8.3 56 164-225 25-81 (137)
438 TIGR01305 GMP_reduct_1 guanosi 40.4 1.7E+02 0.0037 28.4 8.3 129 121-255 98-241 (343)
439 PLN03013 cysteine synthase 40.4 98 0.0021 31.2 7.1 82 121-208 178-259 (429)
440 PRK06372 translation initiatio 40.3 3.1E+02 0.0067 25.5 14.5 97 120-231 88-190 (253)
441 COG2185 Sbm Methylmalonyl-CoA 40.1 74 0.0016 26.6 5.2 60 163-227 33-92 (143)
442 cd02068 radical_SAM_B12_BD B12 39.7 1.3E+02 0.0029 24.1 6.8 68 162-237 8-79 (127)
443 PF04413 Glycos_transf_N: 3-De 39.5 1.2E+02 0.0026 26.6 6.9 101 120-234 22-126 (186)
444 cd01455 vWA_F11C1-5a_type Von 39.4 65 0.0014 28.4 5.1 36 196-231 112-147 (191)
445 PRK06371 translation initiatio 39.0 3.7E+02 0.008 26.0 12.2 81 144-233 168-256 (329)
446 PF01976 DUF116: Protein of un 38.7 1.6E+02 0.0035 25.1 7.2 75 109-194 80-158 (158)
447 KOG2865 NADH:ubiquinone oxidor 38.4 1.7E+02 0.0036 27.8 7.6 84 144-231 83-173 (391)
448 PLN02672 methionine S-methyltr 38.3 2.1E+02 0.0046 32.6 9.9 130 101-235 426-566 (1082)
449 PRK10494 hypothetical protein; 37.4 84 0.0018 29.3 5.8 71 105-179 140-210 (259)
450 PLN02361 alpha-amylase 37.2 1E+02 0.0022 30.8 6.7 83 144-235 8-98 (401)
451 PF02603 Hpr_kinase_N: HPr Ser 36.2 54 0.0012 26.7 3.9 39 187-231 72-110 (127)
452 KOG3974 Predicted sugar kinase 36.1 1.6E+02 0.0034 27.4 7.0 50 185-234 91-140 (306)
453 PF10087 DUF2325: Uncharacteri 36.1 1.8E+02 0.0039 22.2 6.7 63 165-232 18-81 (97)
454 PLN02565 cysteine synthase 35.7 1.2E+02 0.0026 29.2 6.8 52 121-178 70-121 (322)
455 COG1587 HemD Uroporphyrinogen- 35.5 2.2E+02 0.0047 26.1 8.4 137 106-258 41-185 (248)
456 TIGR02026 BchE magnesium-proto 35.2 1E+02 0.0022 31.8 6.7 70 163-236 29-102 (497)
457 COG1058 CinA Predicted nucleot 34.7 1.3E+02 0.0028 27.9 6.5 83 145-234 9-95 (255)
458 PRK06015 keto-hydroxyglutarate 34.3 2.4E+02 0.0052 25.1 7.9 44 180-232 60-103 (201)
459 cd06409 PB1_MUG70 The MUG70 pr 33.1 59 0.0013 24.5 3.3 75 87-176 7-81 (86)
460 COG2870 RfaE ADP-heptose synth 33.0 78 0.0017 31.3 4.8 82 148-233 93-178 (467)
461 PF00478 IMPDH: IMP dehydrogen 32.9 4E+02 0.0086 26.1 9.7 50 184-233 158-218 (352)
462 PF08659 KR: KR domain; Inter 32.8 1.7E+02 0.0036 25.3 6.8 67 123-194 4-73 (181)
463 cd04728 ThiG Thiazole synthase 32.8 2.2E+02 0.0049 26.2 7.5 72 156-233 106-182 (248)
464 PLN02556 cysteine synthase/L-3 32.7 1.3E+02 0.0027 29.7 6.5 84 120-209 113-196 (368)
465 COG0300 DltE Short-chain dehyd 32.6 2.9E+02 0.0064 25.8 8.5 99 121-222 8-112 (265)
466 COG0352 ThiE Thiamine monophos 32.4 62 0.0013 29.1 3.9 49 186-234 24-73 (211)
467 PLN00011 cysteine synthase 32.3 2.7E+02 0.0059 26.8 8.7 53 120-178 71-123 (323)
468 PF01081 Aldolase: KDPG and KH 32.0 2.3E+02 0.0049 25.2 7.4 42 183-233 67-108 (196)
469 PRK11761 cysM cysteine synthas 31.7 2.7E+02 0.0059 26.4 8.5 53 120-178 65-117 (296)
470 PF00128 Alpha-amylase: Alpha 31.6 33 0.00071 32.3 2.3 68 160-235 7-74 (316)
471 COG2984 ABC-type uncharacteriz 31.3 3.5E+02 0.0076 26.0 8.8 67 165-236 183-249 (322)
472 PRK05678 succinyl-CoA syntheta 31.2 2.7E+02 0.0059 26.4 8.3 46 186-235 79-125 (291)
473 PF07085 DRTGG: DRTGG domain; 31.1 1.8E+02 0.0039 22.5 6.1 41 185-231 50-90 (105)
474 COG2099 CobK Precorrin-6x redu 30.4 1.8E+02 0.004 26.8 6.6 94 120-230 4-97 (257)
475 PF04392 ABC_sub_bind: ABC tra 30.3 1.2E+02 0.0025 28.7 5.8 151 71-230 14-164 (294)
476 COG0296 GlgB 1,4-alpha-glucan 30.3 36 0.00077 35.9 2.3 37 200-236 201-237 (628)
477 PRK13397 3-deoxy-7-phosphohept 30.1 4.5E+02 0.0098 24.3 12.3 136 88-240 53-198 (250)
478 COG2121 Uncharacterized protei 30.1 1.8E+02 0.0038 26.0 6.1 70 163-234 84-154 (214)
479 TIGR01470 cysG_Nterm siroheme 30.0 4E+02 0.0086 23.7 9.8 91 116-230 7-98 (205)
480 KOG1201 Hydroxysteroid 17-beta 29.9 3.9E+02 0.0084 25.4 8.7 54 121-179 41-94 (300)
481 TIGR01182 eda Entner-Doudoroff 29.4 3.1E+02 0.0067 24.5 7.8 93 122-231 14-106 (204)
482 PRK05973 replicative DNA helic 29.3 4.5E+02 0.0098 24.1 9.4 35 196-230 147-187 (237)
483 COG2102 Predicted ATPases of P 28.9 3.7E+02 0.0081 24.3 8.1 99 121-230 4-116 (223)
484 cd01137 PsaA Metal binding pro 28.7 4E+02 0.0088 25.1 9.1 71 146-229 177-252 (287)
485 cd05126 Mth938 Mth938 domain. 28.7 1.4E+02 0.003 24.0 5.0 50 183-234 45-94 (117)
486 PF05690 ThiG: Thiazole biosyn 28.7 2.8E+02 0.006 25.4 7.3 69 158-233 111-182 (247)
487 PRK00208 thiG thiazole synthas 28.5 3.9E+02 0.0085 24.7 8.3 72 156-233 106-182 (250)
488 COG2099 CobK Precorrin-6x redu 28.5 91 0.002 28.8 4.3 28 210-237 50-77 (257)
489 PRK09622 porA pyruvate flavodo 28.3 2.3E+02 0.005 28.4 7.6 82 160-242 283-368 (407)
490 PLN02784 alpha-amylase 28.0 1.2E+02 0.0027 33.3 5.8 82 145-235 500-590 (894)
491 PRK09441 cytoplasmic alpha-amy 27.8 42 0.00091 34.4 2.4 68 158-235 23-103 (479)
492 COG2022 ThiG Uncharacterized e 27.7 1.8E+02 0.004 26.5 5.9 91 156-253 116-209 (262)
493 PRK08329 threonine synthase; V 27.6 3.7E+02 0.008 26.2 8.8 54 119-178 105-158 (347)
494 KOG1251 Serine racemase [Signa 27.5 4.5E+02 0.0098 24.4 8.3 76 121-205 76-151 (323)
495 TIGR01136 cysKM cysteine synth 27.4 3.6E+02 0.0078 25.5 8.6 53 121-179 61-113 (299)
496 COG0157 NadC Nicotinate-nucleo 27.0 2.6E+02 0.0057 26.2 7.1 97 147-255 159-262 (280)
497 TIGR00789 flhB_rel flhB C-term 26.9 59 0.0013 24.3 2.4 21 215-235 29-49 (82)
498 PRK05234 mgsA methylglyoxal sy 26.9 3.5E+02 0.0077 22.5 7.3 63 170-235 50-115 (142)
499 cd01561 CBS_like CBS_like: Thi 26.4 4.1E+02 0.0089 25.0 8.8 53 121-179 56-108 (291)
500 PF07131 DUF1382: Protein of u 26.1 65 0.0014 22.2 2.2 32 402-433 20-51 (61)
No 1
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=7e-72 Score=526.29 Aligned_cols=381 Identities=57% Similarity=0.928 Sum_probs=366.6
Q ss_pred cEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHH
Q 040741 58 PLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKG 137 (457)
Q Consensus 58 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~ 137 (457)
+||||++.++|+.|+++++|.+++...||||+| .|.+|+...+.++++|+++|+++|+++++|+||+||||++|+++++
T Consensus 2 miYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS-~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g 80 (386)
T COG1104 2 MIYLDNAATTPVDPEVLEAMLPYLTEVFGNPSS-LHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKG 80 (386)
T ss_pred cccccccccCCCCHHHHHHHHHHHHhhcCCccc-hhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHh
Confidence 699999999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred hhhhhc--CCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccCh
Q 040741 138 VMHFYK--DKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPM 215 (457)
Q Consensus 138 ~~~~~~--~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l 215 (457)
+...+. +++.|||++..+|+++.+.+++++..|++|+|++++.+|.+|+++|+++|+++|.+|+++++||++|+++|+
T Consensus 81 ~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQpI 160 (386)
T COG1104 81 AALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQPI 160 (386)
T ss_pred hHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcCCCceEEEEEecccCeeecccH
Confidence 654443 368999999999999999999998889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCCceEEEEecCCCccccccccCCccccccccCC
Q 040741 216 EEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGT 295 (457)
Q Consensus 216 ~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t 295 (457)
++|.++|+++++++|+|++|++|.+|+++..+++|++++|.||++||.|+|++++++ ..++.|.+.||+|+++.|+||
T Consensus 161 ~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~~vD~ls~SaHK~~GpkGiGaLyv~~--~~~~~p~i~GGgQE~g~RsGT 238 (386)
T COG1104 161 AEIGEICKERGILFHVDAVQAVGKIPIDLEELGVDLLSFSAHKFGGPKGIGALYVRP--GVRLEPLIHGGGQERGLRSGT 238 (386)
T ss_pred HHHHHHHHHcCCeEEEehhhhcCceeccccccCcceEEeehhhccCCCceEEEEECC--CCccCceeccCcCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999964 478899999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHHhcc--cCe
Q 040741 296 LPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGL--KEV 373 (457)
Q Consensus 296 ~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i 373 (457)
.|+++++++..|++...++++...++...++++|.+.|.+..|++.+.+.+..+.|+++++.|++++++.++..| +||
T Consensus 239 env~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~gE~ll~~L~~~gI 318 (386)
T COG1104 239 ENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVEGESLLLALDLAGI 318 (386)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCcHHHHHHhccccCe
Confidence 999999999999999999999999999999999999999845999999988899999999999999999999999 499
Q ss_pred EecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHhcChhHH
Q 040741 374 AVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLREMSPLYE 441 (457)
Q Consensus 374 ~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~~~~~~~ 441 (457)
+++.|++|+++.++|++||.++|++++.+++.|||+++.++|+||||++++.+.++++++++++|+|.
T Consensus 319 ~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~~~~~~~ 386 (386)
T COG1104 319 AVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLRELSPLWA 386 (386)
T ss_pred EEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhhhccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999984
No 2
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=100.00 E-value=9.6e-65 Score=478.88 Aligned_cols=388 Identities=63% Similarity=1.023 Sum_probs=367.8
Q ss_pred ccCCCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHH
Q 040741 53 RIAGRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNN 132 (457)
Q Consensus 53 ~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~ 132 (457)
..+.+++|||+++++|++++|+++|.+++...++|||++ .|+|...+.++++|+.+|+++|+++++|+||+|+|+|++
T Consensus 39 ~~~~~~vyld~~at~p~~~~Vldam~~~~~~~~~nPh~~--~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~N 116 (428)
T KOG1549|consen 39 HHGTRPVYLDNQATGPMDPRVLDAMLPYLLEYLGNPHSR--SYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNN 116 (428)
T ss_pred cCCCccEEEecCcCCCCCHHHHHHHHHHHHHhhcCCCcc--ccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHH
Confidence 456789999999999999999999999999999999997 789999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcC-CCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEecccccccc
Q 040741 133 VSIKGVMHFYKD-KKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGV 211 (457)
Q Consensus 133 ~al~~~~~~~~~-~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~ 211 (457)
++++++.+++++ .+.+||+.+.+|+|+..+++.++..|++|+++|++.++.+|++.+++.|+++|++|.+++++|++|+
T Consensus 117 lvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv 196 (428)
T KOG1549|consen 117 LVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIRSKTRLVSIMHVNNEIGV 196 (428)
T ss_pred HHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcCCCceEEEEEecccCccc
Confidence 999999987664 3349999999999999999999999999999999988999999999999999999999999999999
Q ss_pred ccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCCceEEEEec-CCCccccccccCCccccc
Q 040741 212 IQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRR-RPRIRVEPLINGGGQERG 290 (457)
Q Consensus 212 ~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~-~~~~~~~~~~~~~~~~~~ 290 (457)
++|+++|.++|+++++++|+|+||++|..++|+.++++|++++|.||+|||+|+|++|+++ ...-+..|.+.||+++++
T Consensus 197 ~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV~eln~D~~s~s~HK~ygp~~iGaLYvr~~~~~~~~~p~~~GGgq~r~ 276 (428)
T KOG1549|consen 197 LQPVKEIVKICREEGVQVHVDAAQAVGKIPVDVQELNADFLSISAHKIYGPPGIGALYVRRKRPRLRVEPPLSGGGQERG 276 (428)
T ss_pred cccHHHHHHHhCcCCcEEEeehhhhcCCccccHHHcCchheeeecccccCCCcceEEEEccCCCcccccCcccCCccccc
Confidence 9999999999999999999999999999999999999999999999999999999999998 566677899999999999
Q ss_pred cccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHHhcc
Q 040741 291 IRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGL 370 (457)
Q Consensus 291 ~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 370 (457)
+++||.+.+...++..|+++....+......+.++...+...+....+++.+.|++...+++++.+.|+.+++..+++.+
T Consensus 277 ~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~~~~~~ll~~i~~~~~~~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~ 356 (428)
T KOG1549|consen 277 LRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIKRLSEKLLMGIGQSLPEVTLNGSGKSRYPGLVSLSFPYVEGESLLMDL 356 (428)
T ss_pred cccCCcCchhhhhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHhhhCchhhccCCcccccccceeeecccccCcchhhhh
Confidence 99999999999999999999988777777777789999988887657889999999899999999999999999999999
Q ss_pred cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHhcChhHHH
Q 040741 371 KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLREMSPLYEM 442 (457)
Q Consensus 371 ~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~~~~~~~~ 442 (457)
+.+.+++|..|.+..++|+|++++.|.+.+..+..|||+++.+++++|++++++.+++.++.+++|+|||+|
T Consensus 357 ~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~~~~~~i~~~v~~~~~~s~l~~~ 428 (428)
T KOG1549|consen 357 KDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDIDYLVDAIKKLVSLLREMSPLWEM 428 (428)
T ss_pred hhhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHHHHHHHHHHHHHHHHhccccCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999987
No 3
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=100.00 E-value=3.6e-55 Score=437.05 Aligned_cols=399 Identities=64% Similarity=1.085 Sum_probs=364.1
Q ss_pred cEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHH
Q 040741 58 PLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKG 137 (457)
Q Consensus 58 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~ 137 (457)
++|||+++++++++++++++.+++...+++|+++.+..++...+.++++++.+++++|+++++++|++|+|+++++++.+
T Consensus 4 ~~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~ 83 (402)
T TIGR02006 4 PIYLDYAATTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESNNLAIKG 83 (402)
T ss_pred cEEeeCCcCCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHH
Confidence 58999999999999999999999987788988766666777778899999999999999888999999999999999888
Q ss_pred hhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHH
Q 040741 138 VMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEE 217 (457)
Q Consensus 138 ~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~ 217 (457)
+...+.++|++|+++..+|+++..++..++..|+++++++.+.++.+|++++++++++++++|++++++|++|.+.|+++
T Consensus 84 l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~~~~ 163 (402)
T TIGR02006 84 IAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQDIAA 163 (402)
T ss_pred HHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCCCCEEEEEECCCcCceecccHHH
Confidence 76433368899999999999999888877777999999999888899999999999999999999999999999999999
Q ss_pred HHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCCceEEEEecCCCccccccccCCccccccccCCCC
Q 040741 218 IGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLP 297 (457)
Q Consensus 218 i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 297 (457)
|.++|+++|+++++|++|++|..++++..+++|++++|+||++||.|+|+++++++...++.+...++++.++++.|+++
T Consensus 164 I~~l~~~~g~~livD~a~a~g~~~~~~~~~~~D~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~ 243 (402)
T TIGR02006 164 IGEICRERKVFFHVDAAQSVGKIPINVNELKVDLMSISGHKIYGPKGIGALYVRRKPRVRLEALIHGGGHERGMRSGTLP 243 (402)
T ss_pred HHHHHHHcCCEEEEEcchhcCCcccCccccCCCEEEEehhhhcCCCceEEEEEccCCCCCCCceecCCCccCCccCCCcc
Confidence 99999999999999999999999999988899999999999999999999999988777777777777777778899999
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHHhcccCeEecc
Q 040741 298 TPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGLKEVAVSS 377 (457)
Q Consensus 298 ~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~ 377 (457)
+..+.++..+++.+.++++.+.++.+++++++.+.|++ ++++.+.++...+.+..+.+.|...+.+.+...++++.++.
T Consensus 244 ~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~-~~~v~~~~~~~~~~p~~~~v~f~~~~~~~~~~~l~~i~v~~ 322 (402)
T TIGR02006 244 THQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKS-IEEVYLNGDLEHRVPGNLNVSFNYVEGESLIMALKDLAVSS 322 (402)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc-CCCEEEeCCccccCCCeEEEEEeCcCHHHHHHhcCCEEEec
Confidence 99999999999998888888999999999999999998 89998887655555666667777777778888889999999
Q ss_pred cCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHhcChhHHHHHhcCCccccccccC
Q 040741 378 GSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLREMSPLYEMVKEGIDIKQIQWAQH 457 (457)
Q Consensus 378 g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (457)
|.+|++...+|+++++++|+.+...++.||++++.++|+||||++++.|++++++++.++|.|+|..+|.|+..++|..|
T Consensus 323 G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (402)
T TIGR02006 323 GSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLRELSPLWEMFKEGVDLNSIEWAAH 402 (402)
T ss_pred hhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhcchhhhccccCCccccCCCCC
Confidence 99999999999999999999888888999999999999999999999999999999999999999999999999999876
No 4
>PRK14012 cysteine desulfurase; Provisional
Probab=100.00 E-value=2.5e-52 Score=417.06 Aligned_cols=399 Identities=63% Similarity=1.073 Sum_probs=356.2
Q ss_pred cEEecCCCCCCCCHHHHHHHHHHHh--hccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHH
Q 040741 58 PLYLDMQATTPVDPRVLDAMLPFYL--SRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSI 135 (457)
Q Consensus 58 ~i~l~~~~~~~~~~~v~~a~~~~~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al 135 (457)
.+|||+++++++++++++++.+++. ..+++|+++.+..++...+.++++|+.+++++|+++++++|++|+|+|+++++
T Consensus 4 ~iyld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l 83 (404)
T PRK14012 4 PIYLDYSATTPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATESDNLAI 83 (404)
T ss_pred eEEecCcCCCCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHH
Confidence 4899999999999999999999987 66788887666667777788999999999999998888999999999999999
Q ss_pred HHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccCh
Q 040741 136 KGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPM 215 (457)
Q Consensus 136 ~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l 215 (457)
.++...+.++|++|+++..+|+++..+++.++..|+++++++.+.++.+|+++++++|++++++|++++++|++|.+.|+
T Consensus 84 ~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~ 163 (404)
T PRK14012 84 KGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQDI 163 (404)
T ss_pred HHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcCCCCEEEEEECcCCCccchhhH
Confidence 88764333789999999999999988887777779999999998889999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCCceEEEEecCCCccccccccCCccccccccCC
Q 040741 216 EEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGT 295 (457)
Q Consensus 216 ~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t 295 (457)
++|.++|+++|+++|+|++|++|..++++...++|++++|+||++||.|+|+++++++...++.+...|++..++++.|+
T Consensus 164 ~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt 243 (404)
T PRK14012 164 AAIGEICRERGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAHKIYGPKGIGALYVRRKPRVRLEAQMHGGGHERGMRSGT 243 (404)
T ss_pred HHHHHHHHHcCCEEEEEcchhcCCcccCcccCCCCEEEEehhhccCCCceEEEEEecCCCCCCCceecCCCccCCccCCC
Confidence 99999999999999999999999999888888899999999999999899999999887667777666766666678889
Q ss_pred CChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHHhcccCeEe
Q 040741 296 LPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGLKEVAV 375 (457)
Q Consensus 296 ~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 375 (457)
++...+.++.++++....++....++.+++++++.+.|++ ++++.+.++.....+....+.|...+..++...|+++.+
T Consensus 244 ~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i 322 (404)
T PRK14012 244 LPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKD-IEEVYLNGDLEQRVPGNLNVSFNYVEGESLIMALKDLAV 322 (404)
T ss_pred cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc-CCCEEEeCCccccCCCEEEEEEeCcCHHHHHHhCCCeEE
Confidence 9999999999999888777788889999999999999999 899988765433445555566665556778888899999
Q ss_pred cccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHhcChhHHHHHhcCCccccccc
Q 040741 376 SSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLREMSPLYEMVKEGIDIKQIQWA 455 (457)
Q Consensus 376 ~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (457)
.+|.+|.+...+|.+.+..+|+.+....+.||++++.++|++|+|+++++|+++++.++.++|+|+|..+|.|+..|+|.
T Consensus 323 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (404)
T PRK14012 323 SSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLRELSPLWEMFKEGVDLNSIEWA 402 (404)
T ss_pred EchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhccchhhccccCCCCccCCC
Confidence 99999999999999999999988888889999999999999999999999999999999999999999999999999998
Q ss_pred cC
Q 040741 456 QH 457 (457)
Q Consensus 456 ~~ 457 (457)
.|
T Consensus 403 ~~ 404 (404)
T PRK14012 403 HH 404 (404)
T ss_pred CC
Confidence 76
No 5
>PLN02651 cysteine desulfurase
Probab=100.00 E-value=9.3e-51 Score=400.36 Aligned_cols=362 Identities=80% Similarity=1.257 Sum_probs=329.8
Q ss_pred EEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHh
Q 040741 59 LYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGV 138 (457)
Q Consensus 59 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~ 138 (457)
+|||+++++++++++++++.+++...++||+++.+.+++.+.+.++++++.+++++|+++++++|++|+|+++++++.++
T Consensus 1 iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~ 80 (364)
T PLN02651 1 LYLDMQATTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGV 80 (364)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHH
Confidence 69999999999999999999999888899887667667777889999999999999998889999999999999998887
Q ss_pred hhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHH
Q 040741 139 MHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEI 218 (457)
Q Consensus 139 ~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i 218 (457)
...+.++|++|+++..+|+++...+..+...|++++.++.+.++.+|+++++++|+++++++++++++|++|.+.|+++|
T Consensus 81 ~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~l~~I 160 (364)
T PLN02651 81 MHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQPVEEI 160 (364)
T ss_pred HHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEECCCCCceecccHHHH
Confidence 54333678999999999999988887777779999999998888999999999999999999999999999999999999
Q ss_pred HHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCCceEEEEecCCCccccccccCCccccccccCCCCh
Q 040741 219 GQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPT 298 (457)
Q Consensus 219 ~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 298 (457)
.++||++|+++++|++|++|..++++.++++|++++|+||++||.|+|+++++++...++.+...|++++.+++.||++.
T Consensus 161 ~~~~~~~g~~~~vD~a~~~g~~~~~~~~~~~D~~~~s~hK~~gp~G~g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~~ 240 (364)
T PLN02651 161 GELCREKKVLFHTDAAQAVGKIPVDVDDLGVDLMSISGHKIYGPKGVGALYVRRRPRVRLEPLMSGGGQERGRRSGTENT 240 (364)
T ss_pred HHHHHHcCCEEEEEcchhhCCcccCcccCCCCEEEechhhhCCCCceEEEEEcCCCCCCCCccccCCCccCCccCCCccH
Confidence 99999999999999999999999999999999999999999999999999999998888888888888777889999999
Q ss_pred hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCC--CCcccceEEEEEccccchHHHhcccCeEec
Q 040741 299 PLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSM--ERRYIGNLNLSFAYVEGESLLMGLKEVAVS 376 (457)
Q Consensus 299 ~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~ 376 (457)
+.+.++.++++++.++.+++.++.+++.+++.+.|.+.+++++++++. ..+.++++.|.+++.+++++...|.+|.++
T Consensus 241 ~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~i~v~ 320 (364)
T PLN02651 241 PLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAYVEGESLLMGLKEVAVS 320 (364)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCCCCHHHHHHHhCCEEEE
Confidence 999999999999988788999999999999999998536899999863 334577888999888888998888779999
Q ss_pred ccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHH
Q 040741 377 SGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVD 420 (457)
Q Consensus 377 ~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid 420 (457)
.|.+|++...+++.+++++|..+....+.+|+|++.++|++|||
T Consensus 321 ~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 321 SGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred chhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 99999999999999999999887667799999999999999986
No 6
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-49 Score=389.94 Aligned_cols=364 Identities=30% Similarity=0.504 Sum_probs=330.9
Q ss_pred CCCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCC-CcEEEeCChHHHHHH
Q 040741 55 AGRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASP-KEIIFTSGATESNNV 133 (457)
Q Consensus 55 ~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~-~~i~~t~g~T~a~~~ 133 (457)
..+.+|||++++++.|..|++++.+++...++|++++.|..+....+.++++|+.+++++|+++ ++|+||.|+|+|+++
T Consensus 20 ~~~~vylD~aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~ 99 (405)
T COG0520 20 GKPLVYLDNAATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNL 99 (405)
T ss_pred CCCeEEecCcccccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHH
Confidence 4567999999999999999999999999999999998888888888999999999999999995 889999999999999
Q ss_pred HHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHH-hcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccc
Q 040741 134 SIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQ-QEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVI 212 (457)
Q Consensus 134 al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~-~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~ 212 (457)
+..++.... ++||+||++..+|+++...++.+. +.|++++++|.+++|.+|+++++..++++|++|.+++++|.+|.+
T Consensus 100 va~~l~~~~-~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~~Tklvais~vSn~tG~~ 178 (405)
T COG0520 100 VARGLGRSL-KPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITPKTKLVALSHVSNVTGTV 178 (405)
T ss_pred HHHHhhhhh-cCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCCCceEEEEECcccccccc
Confidence 999985321 788999999999999999998775 459999999999999999999999999999999999999999999
Q ss_pred cChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEecccc-ccCCCCceEEEEecCCCccccccccCCcc----
Q 040741 213 QPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHK-IYGPKGVGALYMRRRPRIRVEPLINGGGQ---- 287 (457)
Q Consensus 213 ~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K-~~g~~G~G~l~~~~~~~~~~~~~~~~~~~---- 287 (457)
.|+++|+++||++|+++++|++|++|..++|+.++++|++++|+|| ++||.|+|+++++++.++.+.|...|++.
T Consensus 179 ~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~~l~~l~P~~~gg~~~~~~ 258 (405)
T COG0520 179 NPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKELLEELEPFLGGGGMIEYV 258 (405)
T ss_pred chHHHHHHHHHHcCCEEEEECccccCccCCCchhcCCCEEEEcccccccCCCceEEEEEchHHHhhcCCcccCCCceeee
Confidence 9999999999999999999999999999999999999999999999 89999999999999999999887776543
Q ss_pred -----------ccccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEE
Q 040741 288 -----------ERGIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLN 355 (457)
Q Consensus 288 -----------~~~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 355 (457)
..++..||++.....++.+|+++.++ +++++.++.+++.+++.+.|.+ +|++++++++.....+.+.
T Consensus 259 ~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~-~~~v~i~g~~~~~r~~~vs 337 (405)
T COG0520 259 SRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSE-LPGVEIYGPPDADRGGIVS 337 (405)
T ss_pred cccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc-CCCeEEecCCcccCceEEE
Confidence 13567899999999999999999887 6899999999999999999999 9999999976545577888
Q ss_pred EEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 356 LSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 356 ~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
|.+.+....++...| +||+++.|.+|..+ +++-++++ ..+|+|++.|+|+||||+++++|+++.+
T Consensus 338 F~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p------~~~~~~~~-----~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 338 FNVKGIHPHDVATLLDEKGIAVRAGHHCAQP------LHRLLGVD-----ATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred EEeCCCCHHHHHHHHHhCCeEEEeccccccH------HHHhcCCC-----CceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 888988888988888 78999999999863 46666766 4599999999999999999999998765
No 7
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=100.00 E-value=4.1e-49 Score=391.16 Aligned_cols=376 Identities=52% Similarity=0.857 Sum_probs=333.5
Q ss_pred EEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHh
Q 040741 59 LYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGV 138 (457)
Q Consensus 59 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~ 138 (457)
+|||+++++++++++++++.+++...++||++ .+..+..+.+.++++++.+++++|+++++++||+|+|+++++++.++
T Consensus 1 ~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~ 79 (379)
T TIGR03402 1 IYLDNNATTRVDPEVLEAMLPYFTEYFGNPSS-MHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSA 79 (379)
T ss_pred CcCCCcCCCCCCHHHHHHHHHHHHhcCCCCCc-ccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHH
Confidence 59999999999999999999999877888885 45556666788999999999999999889999999999999999887
Q ss_pred hhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHH
Q 040741 139 MHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEI 218 (457)
Q Consensus 139 ~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i 218 (457)
.... .++++|+++..+|+++...+..++..|.+++.++.+.+|.+|+++++++++++++++++++++|++|.+.|+++|
T Consensus 80 ~~~~-~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~I 158 (379)
T TIGR03402 80 LAAQ-PEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAITDDTALVSVMWANNETGTIFPIEEI 158 (379)
T ss_pred HHhc-CCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEEcccCCeeecccHHHH
Confidence 5221 346899999999999988887777789999999988888899999999999999999999999999999999999
Q ss_pred HHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCCceEEEEecCCCccccccccCCccccccccCCCCh
Q 040741 219 GQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPT 298 (457)
Q Consensus 219 ~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 298 (457)
.++|+++|+++++|++|++|..++++..+++|++++|+||++||.|+|+++++++. .+.|...++.+..+.+.|++++
T Consensus 159 ~~l~~~~g~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G~g~l~v~~~~--~~~p~~~g~~~~~~~~~gt~~~ 236 (379)
T TIGR03402 159 GEIAKERGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHKLHGPKGVGALYIRKGT--RFRPLLRGGHQERGRRAGTENV 236 (379)
T ss_pred HHHHHHcCCEEEEECcccccccccCcccCCCCEEEEcHHHcCCCCceEEEEECCCC--CCCCcccCCccCCCcCCCCccH
Confidence 99999999999999999999999999989999999999999999999999998764 3566666666666678899999
Q ss_pred hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHHhcc--cCeEec
Q 040741 299 PLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGL--KEVAVS 376 (457)
Q Consensus 299 ~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~ 376 (457)
+.+.++.+++++..+.++++.++.+++.+++++.|.+.++++.+.+++..+.++.+.+.++..++.++...| +||.++
T Consensus 237 ~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~ 316 (379)
T TIGR03402 237 PGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYIEGEAILLLLDMEGICAS 316 (379)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCCCHHHHHHhhccCCEEEE
Confidence 999999999999988888888999999999999998437899998865545567888888888888888777 699999
Q ss_pred ccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHhcCh
Q 040741 377 SGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLREMSP 438 (457)
Q Consensus 377 ~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~~~~ 438 (457)
+|.+|++...+++.+++++|.......+.||++++.++|++|||++++.|+++++++++++|
T Consensus 317 ~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~~~~~ 378 (379)
T TIGR03402 317 SGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLRAMSP 378 (379)
T ss_pred chhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999877667789999999999999999999999999998877543
No 8
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=100.00 E-value=2.5e-48 Score=385.85 Aligned_cols=374 Identities=46% Similarity=0.725 Sum_probs=330.2
Q ss_pred EEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCC-CCCcEEEeCChHHHHHHHHHH
Q 040741 59 LYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGA-SPKEIIFTSGATESNNVSIKG 137 (457)
Q Consensus 59 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~-~~~~i~~t~g~T~a~~~al~~ 137 (457)
+|||++++++++++|++++.+++...++||++ .+.++....+.+.+.++.+++.+|+ ++++++||+|+|+++++++.+
T Consensus 1 ~yld~aa~~~~~~~v~~~~~~~~~~~~~n~~~-~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~ 79 (382)
T TIGR03403 1 VYLDNNATTMLDPKVKELMDPFFCDIYGNPNS-LHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKG 79 (382)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHHhcCcCCcc-ccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHH
Confidence 59999999999999999999999988999985 6667766667788888888888887 678899999999999999987
Q ss_pred hhh-hh-cCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccCh
Q 040741 138 VMH-FY-KDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPM 215 (457)
Q Consensus 138 ~~~-~~-~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l 215 (457)
+.. .+ +..+++|+++..+|+++...+..++..|++++.++.+.++.+|+++++++++++++++++++++|++|.+.|+
T Consensus 80 ~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~ 159 (382)
T TIGR03403 80 VYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFPI 159 (382)
T ss_pred HHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhcccCCeEEEEEcccCCCccccCH
Confidence 642 11 1335789999999999999888777789999999998888999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCCceEEEEecCCCccccccccCCccccccccCC
Q 040741 216 EEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGT 295 (457)
Q Consensus 216 ~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t 295 (457)
++|.++|+++|+++++|++++.|..++++.++++|++++|+||++||+|+|+++++++. .+.+...|+++..+.+.|+
T Consensus 160 ~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G~g~l~vr~~~--~~~p~~~g~~~~~~~~~gt 237 (382)
T TIGR03403 160 KEIGEICKERGVLFHTDAVQAIGKIPVDVQKAGVDFLSFSAHKFHGPKGVGGLYIRKGV--ELTPLFHGGEHMGGRRSGT 237 (382)
T ss_pred HHHHHHHHHcCCEEEEechhhcCCCccCccccCCCEEEEcchhhCCCCceEEEEECCCC--CCCCcccCCCCCCCcccCC
Confidence 99999999999999999999999999988888999999999999999999999998764 3456555555566678899
Q ss_pred CChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHHhcc--cCe
Q 040741 296 LPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGL--KEV 373 (457)
Q Consensus 296 ~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i 373 (457)
++.+.++++..+++...+.++...++.+++++++.+.|.+ ++++.++++.+.+.++++.+.+++++++.+...| +||
T Consensus 238 ~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI 316 (382)
T TIGR03403 238 LNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLE-LPDVFVVGDREHRVPNTILISIKGVEGEAMLWDLNKAGI 316 (382)
T ss_pred cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc-CCCEEEECCCCCCcCCEEEEEeCCCCHHHHHHhhccCCE
Confidence 9999999999999988777888889999999999999999 8999999865555577778888877788777766 799
Q ss_pred EecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 040741 374 AVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLREM 436 (457)
Q Consensus 374 ~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~~ 436 (457)
.++.|++|++..+++++++.++|..++..++.||++++.++|++|||+++++|++++++++..
T Consensus 317 ~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~~~ 379 (382)
T TIGR03403 317 AASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLRAI 379 (382)
T ss_pred EEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999998766667899999999999999999999999999988764
No 9
>PRK02948 cysteine desulfurase; Provisional
Probab=100.00 E-value=1.7e-46 Score=372.70 Aligned_cols=372 Identities=34% Similarity=0.568 Sum_probs=320.5
Q ss_pred cEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHH
Q 040741 58 PLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKG 137 (457)
Q Consensus 58 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~ 137 (457)
++|||+++++++++++++++.++++..++||++ .+..+....+.++++++.+++++|+++++++|++|+|+++++++.+
T Consensus 1 ~~yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~ 79 (381)
T PRK02948 1 MIYLDYAATTPMSKEALQTYQKAASQYFGNESS-LHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQS 79 (381)
T ss_pred CEeccCCCCCCCCHHHHHHHHHHHHhcCCCCcc-ccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHH
Confidence 489999999999999999999999888888875 5667777778999999999999999888999999999999999988
Q ss_pred hhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHH
Q 040741 138 VMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEE 217 (457)
Q Consensus 138 ~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~ 217 (457)
+...+.++++.|+++..+|+++...++.++..|.+++.++.+.++.+|++++++++++++++|++++++|++|.+.|+++
T Consensus 80 ~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~ 159 (381)
T PRK02948 80 LLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAITPDTVLASIQHANSEIGTIQPIAE 159 (381)
T ss_pred HHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehhHHH
Confidence 86432357899999999999999988888888999999999888899999999999999999999999999999999999
Q ss_pred HHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCCceEEEEecCCCccccccccCCccccccccCCCC
Q 040741 218 IGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLP 297 (457)
Q Consensus 218 i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 297 (457)
|.++|+++|+++++|+++++|..++++..+++|++++|+||++||.|+|+++++++. .+.+...++.+..++..++++
T Consensus 160 I~~l~~~~~~~vivD~~~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~--~~~~~~~~~~~~~~~~~~t~~ 237 (381)
T PRK02948 160 IGALLKKYNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSAHKIYGPKGVGAVYINPQV--RWKPVFPGTTHEKGFRPGTVN 237 (381)
T ss_pred HHHHHHHcCCEEEEEChhhccccccCcccCCCCEEEecHHhcCCCCcEEEEEEcCCC--CCCCcccCCCCCCCcCCCCcc
Confidence 999999999999999999999999888888999999999999999999999998764 222333334445567889999
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCC-CeEEeCCCCCcccceEEEEEccccchHHHhcc--cCeE
Q 040741 298 TPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLD-GVVVNGSMERRYIGNLNLSFAYVEGESLLMGL--KEVA 374 (457)
Q Consensus 298 ~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~ 374 (457)
.+.+.++.++++...+++++..++.+++++++.+.|++ ++ .+...+......+.++.+.+++.+..++...| +||.
T Consensus 238 ~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~v~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~gI~ 316 (381)
T PRK02948 238 VPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQT-LPLPIEVEGHSTSCLPHIIGVTIKGIEGQYTMLECNRRGIA 316 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCEEEeCCCccCcCCEEEEEeCCCCHHHHHHhcccCCEE
Confidence 99999999999988777889999999999999999998 53 13323223334455666777766667666666 7999
Q ss_pred ecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 375 VSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 375 ~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
++.|..|+++..+|+++++++|...+..++.|||+++.++|++|+|++++.|++.++++
T Consensus 317 v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 375 (381)
T PRK02948 317 ISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQF 375 (381)
T ss_pred EEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998554556899999999999999999999999987654
No 10
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=4.6e-46 Score=372.32 Aligned_cols=362 Identities=25% Similarity=0.374 Sum_probs=311.9
Q ss_pred CCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCC-CCCcEEEeCChHHHHHHH
Q 040741 56 GRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGA-SPKEIIFTSGATESNNVS 134 (457)
Q Consensus 56 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~-~~~~i~~t~g~T~a~~~a 134 (457)
.+.+|||+++++++++++++++.+++...++|++++.+..+....+..+++|+.+++++|+ ++++++||+|+|++++++
T Consensus 22 ~~~iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~ 101 (406)
T PRK09295 22 LPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGINLV 101 (406)
T ss_pred CceEEEeCcccccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHH
Confidence 3579999999999999999999999988788887767766777778999999999999998 577899999999999999
Q ss_pred HHHhhhhhcCCCCEEEEcCCCCcchHHHHHHH-HhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEecccccccccc
Q 040741 135 IKGVMHFYKDKKRHVITTQTEHKCVLDSCRHL-QQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQ 213 (457)
Q Consensus 135 l~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~-~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~ 213 (457)
+.++.....++|++|+++..+|++.......+ +..|++++.++.+.++.+|+++++++++++|++|++++++|++|.+.
T Consensus 102 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~l~~~~n~tG~~~ 181 (406)
T PRK09295 102 ANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFDERTRLLAITHVSNVLGTEN 181 (406)
T ss_pred HHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcCCCcEEEEEecchhcccccC
Confidence 88753211278999999999999887665543 56799999999988888999999999999999999999999999999
Q ss_pred ChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCCceEEEEecCCCccccccccCCcc------
Q 040741 214 PMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQ------ 287 (457)
Q Consensus 214 ~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~~------ 287 (457)
|+++|.++|+++|+++++|++|+.|..++++..+++|++++|+||++||.|+|+++++++.++.+.+...|++.
T Consensus 182 ~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~ 261 (406)
T PRK09295 182 PLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSL 261 (406)
T ss_pred CHHHHHHHHHHcCCEEEEEcccccCccccCchhcCCCEEEeehhhccCCCCcEEEEEchHhHhhCCCcccCCceeeeeec
Confidence 99999999999999999999999999999988889999999999999999999999999877777665444322
Q ss_pred ---------ccccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEE
Q 040741 288 ---------ERGIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLS 357 (457)
Q Consensus 288 ---------~~~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 357 (457)
..+++.||++...++++.+|++++.+ +++++.++.+++++++.+.|.+ +++++++++. ...+++.+.
T Consensus 262 ~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~-~~~~~~~~~~--~~~~iv~~~ 338 (406)
T PRK09295 262 TEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLES-VPDLTLYGPQ--NRLGVIAFN 338 (406)
T ss_pred CCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc-CCCEEEeCCC--CCceEEEEE
Confidence 13567899999999999999999887 6889999999999999999999 8999998753 235677788
Q ss_pred EccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 358 FAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 358 ~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
+++.+++++...| +||.++.|..|.. .++..+|.. +.||+|++.++|++|||+++++|++..+
T Consensus 339 ~~~~~~~~~~~~L~~~gI~v~~g~~c~~------~~~~~~~~~-----~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 339 LGKHHAYDVGSFLDNYGIAVRTGHHCAM------PLMAYYNVP-----AMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred ECCcCHHHHHHHHHhCCeEEeccccchH------HHHHHHCCC-----CEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 7776667776666 6999999999974 355666654 6899999999999999999999988754
No 11
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=100.00 E-value=1.1e-45 Score=371.61 Aligned_cols=370 Identities=26% Similarity=0.369 Sum_probs=318.3
Q ss_pred CCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCChHHHHHHH
Q 040741 56 GRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGAS-PKEIIFTSGATESNNVS 134 (457)
Q Consensus 56 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~i~~t~g~T~a~~~a 134 (457)
.+.+|||++++++.|+.+++++.+++....++++++.+..+....+.++++++.+++++|++ +++++||+|+|++++++
T Consensus 31 ~~~iyLd~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i 110 (424)
T PLN02855 31 SKLVYLDNAATSQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEAINLV 110 (424)
T ss_pred CCeEEeeCccccCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHH
Confidence 45799999999999999999999999887788776566555566678899999999999995 57899999999999999
Q ss_pred HHHhhhhhcCCCCEEEEcCCCCcchHHHHHHH-HhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEecccccccccc
Q 040741 135 IKGVMHFYKDKKRHVITTQTEHKCVLDSCRHL-QQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQ 213 (457)
Q Consensus 135 l~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~-~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~ 213 (457)
+.++....-++|++|+++.++|++....++.+ +..|.+++.++.+.++.+|++++++++++++++|++++++|++|.+.
T Consensus 111 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~ 190 (424)
T PLN02855 111 AYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLSEKTKLVATHHVSNVLGSIL 190 (424)
T ss_pred HHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhccCceEEEEeCccccccccC
Confidence 88642111178999999999999887666543 56699999999987777999999999999999999999999999999
Q ss_pred ChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCCceEEEEecCCCccccccccCCcc------
Q 040741 214 PMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQ------ 287 (457)
Q Consensus 214 ~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~~------ 287 (457)
|+++|.++|+++|+++++|++|+.|..++++..+++|++++|+||++||.|+|+++++++.++++.+...|+..
T Consensus 191 ~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~ 270 (424)
T PLN02855 191 PVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTLGADFLVASSHKMCGPTGIGFLWGKSDLLESMPPFLGGGEMISDVFL 270 (424)
T ss_pred CHHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhcCCCEEEeecccccCCCccEEEEEchhhhhcCCCEecCCCceeeeec
Confidence 99999999999999999999999999999988889999999999999999999999999888888776654432
Q ss_pred --------ccccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCC---CcccceEE
Q 040741 288 --------ERGIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSME---RRYIGNLN 355 (457)
Q Consensus 288 --------~~~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---~~~~~~~~ 355 (457)
..+++.||+++..++++.++++++.+ +++++.++..++++++++.|.+ +++++++++.+ ....+++.
T Consensus 271 ~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~-~~g~~i~~~~~~~~~~r~~~v~ 349 (424)
T PLN02855 271 DHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSS-VPGVRIYGPKPSEGVGRAALCA 349 (424)
T ss_pred CccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc-CCCEEEeCCCcccccCcccEEE
Confidence 34577899999999999999998876 7899999999999999999999 89999997643 23467888
Q ss_pred EEEccccchHHHhcc--c-CeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 356 LSFAYVEGESLLMGL--K-EVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 356 ~~~~~~~~~~~~~~l--~-~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
+.+++.+..++...| + ||.++.|.+|.. ..++.+|.. +.||++++.++|++|||+++++|+++++.
T Consensus 350 ~~~~~~~~~~v~~~L~~~~gI~v~~g~~c~~------~~~~~~g~~-----~~iRiS~~~ynt~~di~~l~~~l~~~~~~ 418 (424)
T PLN02855 350 FNVEGIHPTDLSTFLDQQHGVAIRSGHHCAQ------PLHRYLGVN-----ASARASLYFYNTKEEVDAFIHALKDTIAF 418 (424)
T ss_pred EEECCcCHHHHHHHhcccCCEEEechhhhhH------HHHHHhCCC-----CeEEEEeccCCCHHHHHHHHHHHHHHHHH
Confidence 888877777788777 4 999999999974 234666665 68999999999999999999999999988
Q ss_pred HHhcC
Q 040741 433 LREMS 437 (457)
Q Consensus 433 ~~~~~ 437 (457)
+++|.
T Consensus 419 ~~~~~ 423 (424)
T PLN02855 419 FSSFK 423 (424)
T ss_pred HHhhc
Confidence 87663
No 12
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=1.6e-45 Score=367.64 Aligned_cols=364 Identities=25% Similarity=0.369 Sum_probs=309.8
Q ss_pred CCCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCChHHHHHH
Q 040741 55 AGRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGAS-PKEIIFTSGATESNNV 133 (457)
Q Consensus 55 ~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~i~~t~g~T~a~~~ 133 (457)
..+.+|||+++++++|+.+++++.+++....++|+...+..+....+.++++|+.+++++|++ +++++||+|+|+++++
T Consensus 14 ~~~~iyld~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~ 93 (398)
T TIGR03392 14 QDGTVYLDSAATALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTESINL 93 (398)
T ss_pred CCCeEEeeCccccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHH
Confidence 346899999999999999999999999877788877666666677788999999999999995 7889999999999999
Q ss_pred HHHHhhhhhcCCCCEEEEcCCCCcchHHHHH-HHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccc
Q 040741 134 SIKGVMHFYKDKKRHVITTQTEHKCVLDSCR-HLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVI 212 (457)
Q Consensus 134 al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~ 212 (457)
++.++.....++|++|++++++|++...... .++..|++++.++.+.++.+|+++++++++++|++|++++++|++|.+
T Consensus 94 ~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~ 173 (398)
T TIGR03392 94 VAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTPRTRILALGQMSNVTGGC 173 (398)
T ss_pred HHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhccCceEEEEECcccccccc
Confidence 9998731101689999999999998755443 346679999999998778899999999999999999999999999999
Q ss_pred cChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCCceEEEEecCCCccccccccCCcc-----
Q 040741 213 QPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQ----- 287 (457)
Q Consensus 213 ~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~~----- 287 (457)
.|+++|.++|+++|+++++|++|+.+..++++..+++|++++|+||++||.|+|+++++++.++++.+...++..
T Consensus 174 ~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 253 (398)
T TIGR03392 174 PDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGHKLYGPTGIGVLYGKTELLEAMPPWQGGGKMLSHVS 253 (398)
T ss_pred CCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhcCCCEEEEecccccCCCceEEEEEcHHHHhhCCCeecCCceEeecc
Confidence 999999999999999999999999998888888788999999999999999999999998877777665433221
Q ss_pred ---------ccccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEE
Q 040741 288 ---------ERGIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLS 357 (457)
Q Consensus 288 ---------~~~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 357 (457)
..+++.||++...++++.++++++.+ +++++.++..++++++.+.|.+ ++++.+++.+. ..++.+.
T Consensus 254 ~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~-l~g~~~~~~~~---~~i~~~~ 329 (398)
T TIGR03392 254 FDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQ-LPGFRSFRCPG---SSLLAFD 329 (398)
T ss_pred ccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc-CCCeEEeCCCC---CcEEEEE
Confidence 14567899999999999999998765 5778889999999999999999 88998876542 4566667
Q ss_pred EccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 358 FAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 358 ~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
+++.+.+++...| +||.+++|..|+. .++..+|.. +.||++++.++|++|||+++++|+++++++
T Consensus 330 ~~~~~~~~l~~~L~~~gI~v~~g~~~~~------~~~~~~g~~-----~~iRvS~~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 330 FAGVHHSDLAALLAESGIALRAGQHCAQ------PLMAALGVS-----GTLRASFAPYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred eCCcCHHHHHHHHHhCCEEEecCccchH------HHHHHhCCC-----CEEEEEeeccCCHHHHHHHHHHHHHHHHHh
Confidence 7766667777776 7999999998874 355566654 799999999999999999999999988764
No 13
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=3.2e-45 Score=365.93 Aligned_cols=364 Identities=26% Similarity=0.383 Sum_probs=310.9
Q ss_pred CCCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCC-CCCcEEEeCChHHHHHH
Q 040741 55 AGRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGA-SPKEIIFTSGATESNNV 133 (457)
Q Consensus 55 ~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~-~~~~i~~t~g~T~a~~~ 133 (457)
..+.+|||++++++.|+.+++++.+++...+++++++.+..+..+.+.++++++.+++++|+ ++++|+|++|+|+++++
T Consensus 17 ~~~~~yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~ 96 (401)
T PRK10874 17 QDAGVYLDSAATALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINL 96 (401)
T ss_pred CCceEEEeCCcccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHH
Confidence 34689999999999999999999999988888888767777777888999999999999999 68899999999999999
Q ss_pred HHHHhhhhhcCCCCEEEEcCCCCcchHHHHH-HHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccc
Q 040741 134 SIKGVMHFYKDKKRHVITTQTEHKCVLDSCR-HLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVI 212 (457)
Q Consensus 134 al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~ 212 (457)
++.++.....++|++|++++++|++....+. .++..|.++++++.+.++.+|+++++++++++|++|++++++|++|.+
T Consensus 97 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~i~~~~n~tG~~ 176 (401)
T PRK10874 97 VAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELITPRTRILALGQMSNVTGGC 176 (401)
T ss_pred HHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcCcCcEEEEEeCCcccccCc
Confidence 9998741111689999999999999765544 346669999999998888899999999999999999999999999999
Q ss_pred cChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCCceEEEEecCCCccccccccCCc------
Q 040741 213 QPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGG------ 286 (457)
Q Consensus 213 ~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~------ 286 (457)
.|+++|.++|+++|+++++|++|+.|..++++..+++|++++|+||++||.|+|+++++++.++++.+...++.
T Consensus 177 ~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 256 (401)
T PRK10874 177 PDLARAITLAHQAGMVVMVDGAQGAVHFPADVQALDIDFYAFSGHKLYGPTGIGVLYGKSELLEAMSPWQGGGKMLTEVS 256 (401)
T ss_pred CCHHHHHHHHHHcCCEEEEECCcccccccCCchhcCCCEEEEecccccCCCccEEEEEchHHHhcCCCeecCCcceEeec
Confidence 99999999999999999999999999888888888899999999999999999999999988777766553321
Q ss_pred --------cccccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEE
Q 040741 287 --------QERGIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLS 357 (457)
Q Consensus 287 --------~~~~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 357 (457)
...+++.||+++..+.++.+|++.+.+ +..+..++.+++++++.+.|++ ++++.++.++. .+++.+.
T Consensus 257 ~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~-~~g~~~~~~~~---~~i~~~~ 332 (401)
T PRK10874 257 FDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAK-LPGFRSFRCQD---SSLLAFD 332 (401)
T ss_pred cCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc-CCCEEEeCCCC---CcEEEEE
Confidence 123567789999999999999998765 5778889999999999999998 88998876543 4566667
Q ss_pred EccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 358 FAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 358 ~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
+++.+..++...| +||.+.+|..|+. .++..+|.. +.||++++.++|++|||+++++|+++++.+
T Consensus 333 ~~~~~~~~~~~~L~~~gI~v~~g~~~~~------~~~~~~g~~-----~~iRiS~~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 333 FAGVHHSDLVTLLAEYGIALRAGQHCAQ------PLLAALGVT-----GTLRASFAPYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred ECCcCHHHHHHHHHHCCcEEeccccchH------HHHHHhCCC-----CEEEEEecccCCHHHHHHHHHHHHHHHHHh
Confidence 7766667776666 7999999988864 355566654 799999999999999999999999988765
No 14
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=100.00 E-value=1.2e-44 Score=355.76 Aligned_cols=349 Identities=49% Similarity=0.798 Sum_probs=310.0
Q ss_pred EecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhh
Q 040741 60 YLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVM 139 (457)
Q Consensus 60 ~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~ 139 (457)
|||+++.+++++++++++.+++...+++|+++.+.++....+.++++++.+++++|+++++++|++|+|+++++++.++.
T Consensus 1 yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~ 80 (353)
T TIGR03235 1 YLDHNATTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLA 80 (353)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHH
Confidence 89999999999999999999997777888876666666666789999999999999998899999999999999998876
Q ss_pred hhhcCCC-CEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHH
Q 040741 140 HFYKDKK-RHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEI 218 (457)
Q Consensus 140 ~~~~~~g-~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i 218 (457)
.....+| ++|+++..+|+++......++..|++++.++.+.++.+|++++++++++++++|++++++|++|.+.|+++|
T Consensus 81 ~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I 160 (353)
T TIGR03235 81 RAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQPIREI 160 (353)
T ss_pred HhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccCHHHH
Confidence 3211344 889999999999999888777789999999998888899999999999999999999999999999999999
Q ss_pred HHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCCceEEEEecCCCc--cccccccCCccccccccCCC
Q 040741 219 GQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRI--RVEPLINGGGQERGIRSGTL 296 (457)
Q Consensus 219 ~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~--~~~~~~~~~~~~~~~~~~t~ 296 (457)
.++|+++|+++++|++|++|..++++..+++|++++|+||++||.|+|+++++++... ++.+...++++.+++..|++
T Consensus 161 ~~l~~~~~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (353)
T TIGR03235 161 AEVLEAHEAFFHVDAAQVVGKITVDLSADRIDLISCSGHKIYGPKGIGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTL 240 (353)
T ss_pred HHHHHHcCCEEEEEchhhcCCccccccccCCCEEEeehhhcCCCCceEEEEEccCcccccccCceeeCCCCcCccccCCC
Confidence 9999999999999999999999999988899999999999999999999999987543 35666666666677889999
Q ss_pred ChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHHhcc-cCeEe
Q 040741 297 PTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGL-KEVAV 375 (457)
Q Consensus 297 ~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~i~~ 375 (457)
+++.++++.+++++..++++++.++++++.+++++.|.+ +++++++++....+.++.+.+++.+.+++...| ++|.+
T Consensus 241 ~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~--~g~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~L~~~i~v 318 (353)
T TIGR03235 241 PVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQT--LGVKLNGDPAETIPHILNFSIDGVNSEALIVNLRADAAV 318 (353)
T ss_pred ChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc--CCeEEeCCcccccCCEEEEEeCCcCHHHHHHHHhCCeEE
Confidence 999999999999998878899999999999999999988 799988766556677788888877777887777 58999
Q ss_pred cccCccCCCCCChhHHHHHcCCCccCCCCeEEEec
Q 040741 376 SSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGI 410 (457)
Q Consensus 376 ~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~ 410 (457)
.+|..|.++..+|++++.++|.+++..++.+||++
T Consensus 319 ~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~r~s~ 353 (353)
T TIGR03235 319 STGSACSSSKYEPSHVLQAMGLDTDRARGAIRFSW 353 (353)
T ss_pred EchhhcCCCCCCCCHHHHHcCCCHHHhCccEEEeC
Confidence 99999999999999999999999888889999985
No 15
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=100.00 E-value=1.6e-44 Score=357.17 Aligned_cols=351 Identities=32% Similarity=0.541 Sum_probs=305.2
Q ss_pred EEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCC-CcEEEeCChHHHHHHHHHH
Q 040741 59 LYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASP-KEIIFTSGATESNNVSIKG 137 (457)
Q Consensus 59 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~-~~i~~t~g~T~a~~~al~~ 137 (457)
||||+++++++|+.|++++.+++...++||++..+..+..+.+.++++++.+++++|+++ ++++|++|+|.+++.++.+
T Consensus 1 iYld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~ 80 (371)
T PF00266_consen 1 IYLDNAGTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASS 80 (371)
T ss_dssp EEEBTSSS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHH
T ss_pred CEeeCCCccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhc
Confidence 799999999999999999999999999999777777777888999999999999999998 7899999999999999999
Q ss_pred hhhhhcCCCCEEEEcCCCCcchHHHHHHH-HhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChH
Q 040741 138 VMHFYKDKKRHVITTQTEHKCVLDSCRHL-QQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPME 216 (457)
Q Consensus 138 ~~~~~~~~g~~vi~~~~~h~~~~~~~~~~-~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~ 216 (457)
+.... +++++|++...+|++...++..+ +..|+++++++.+.++.+|+++++++|++++++|+++++++.+|.+.|++
T Consensus 81 l~~~~-~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~pi~ 159 (371)
T PF00266_consen 81 LLNPL-KPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALNPDTRLVSISHVENSTGVRNPIE 159 (371)
T ss_dssp HHHHG-TTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHTTESEEEEESBETTTTBBSSHH
T ss_pred ccccc-ccccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhccccceEEeecccccccEEeeec
Confidence 93211 78999999999999999877765 47799999999988899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCCceEEEEecCCCccccccccCCcc---------
Q 040741 217 EIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQ--------- 287 (457)
Q Consensus 217 ~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~~--------- 287 (457)
+|.++||++|+++++|++|++|..++++.++++|++++|+||++||+|+|+++++++..+++++...+++.
T Consensus 160 ~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~~~D~~~~s~~Kl~gp~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~ 239 (371)
T PF00266_consen 160 EIAKLAHEYGALLVVDAAQSAGCVPIDLDELGADFLVFSSHKLGGPPGLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEY 239 (371)
T ss_dssp HHHHHHHHTTSEEEEE-TTTTTTSS--TTTTTESEEEEESTSTTSSSTEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHH
T ss_pred eehhhhhccCCceeEechhccccccccccccccceeeecccccCCCCchhhheehhhhhhccccccccccccccccchhc
Confidence 99999999999999999999999999999999999999999988999999999999988888777766651
Q ss_pred -----ccccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeC-CCCCcccceEEEEEcc
Q 040741 288 -----ERGIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLDGVVVNG-SMERRYIGNLNLSFAY 360 (457)
Q Consensus 288 -----~~~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 360 (457)
..++..||+++..++++..+++.+.+ +++++.++..++.+++.+.|.+ ++++.+++ +...+.++++.+.+++
T Consensus 240 ~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~-~~~~~~~~~~~~~~~~~i~~~~~~~ 318 (371)
T PF00266_consen 240 GLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEE-LPGIEVLGPDDEPRRPSIVSFNLPG 318 (371)
T ss_dssp CHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTTEEESSSSCGGBGTTEEEEEETT
T ss_pred ccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhc-CCceeEeeecccccccceEEEeecC
Confidence 12356789999999999999999855 6999999999999999999999 99999987 4566778899999988
Q ss_pred ccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHH
Q 040741 361 VEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRA 422 (457)
Q Consensus 361 ~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~ 422 (457)
.+...+...| ++|.+..|..|.. | .+..+++. +.||++++.++|+||||++
T Consensus 319 ~~~~~~~~~L~~~~I~~~~G~~~~~----~--~~~~~~~~-----~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 319 SDADDVVKYLEERGIAVSTGSACAG----P--SLDILGMG-----GVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp SSHHHHHHHHHHHTEEEEESTTTCH----H--HHHHHHTT-----TEEEEE-GTTSSHHHHHHH
T ss_pred CCHHHHHHHHhhcCEEEeccCcccH----H--HHHHhCCC-----CEEEEeccCCCCHHHHhhC
Confidence 8888888887 6999999988872 2 23333333 8999999999999999986
No 16
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=1.7e-43 Score=353.85 Aligned_cols=367 Identities=26% Similarity=0.442 Sum_probs=309.7
Q ss_pred CCCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCChHHHHHH
Q 040741 55 AGRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGAS-PKEIIFTSGATESNNV 133 (457)
Q Consensus 55 ~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~i~~t~g~T~a~~~ 133 (457)
+.+.+|||+++.+++|+.+.+++.++++..+++|+++.+..+..+.+..+++++.+++++|++ +++++|++|+|+++++
T Consensus 16 ~~~~~yld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~ 95 (403)
T TIGR01979 16 GKPLVYLDSAATSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESINL 95 (403)
T ss_pred CCceEEEeCccccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHH
Confidence 446799999999999999999999999888888887666666666778999999999999998 6789999999999999
Q ss_pred HHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHH-HhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccc
Q 040741 134 SIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHL-QQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVI 212 (457)
Q Consensus 134 al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~-~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~ 212 (457)
++.++.....++|++|++++++|++....++.+ ...|.+++.++.+.++.+|++++++++++++++|++++++|++|.+
T Consensus 96 ~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~~ 175 (403)
T TIGR01979 96 VAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLTEKTKLVAITHVSNVLGTV 175 (403)
T ss_pred HHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhccCCeEEEEEccccccccc
Confidence 988763211168999999999999977655433 4569999999998888999999999999999999999999999999
Q ss_pred cChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCCceEEEEecCCCccccccccCCcc-----
Q 040741 213 QPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQ----- 287 (457)
Q Consensus 213 ~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~~----- 287 (457)
.|+++|.++|+++|+++++|++|+.|..++++..+++|++++|+||++||.|+|+++++++.++++.+...++..
T Consensus 176 ~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~g~l~~~~~~~~~~~~~~~g~~~~~~~~ 255 (403)
T TIGR01979 176 NPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFSGHKMYGPTGIGVLYGKEELLEQMPPFLGGGEMIAEVS 255 (403)
T ss_pred CCHHHHHHHHHHcCCEEEEEchhhcCccccCccccCCCEEEEecccccCCCCceEEEEchHHHhcCCCeecCCCceeecc
Confidence 999999999999999999999999999988888889999999999999999999999998877777665544322
Q ss_pred ---------ccccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCC-cccceEEE
Q 040741 288 ---------ERGIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMER-RYIGNLNL 356 (457)
Q Consensus 288 ---------~~~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~ 356 (457)
..++..|+++...++++..+++++.+ +++++.++..++++++.+.|++ +++++++++.+. ...+++.+
T Consensus 256 ~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~-~~g~~~~~~~~~~~~~~~v~~ 334 (403)
T TIGR01979 256 FEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGE-IPGLRIYGPRDAEDRGGIISF 334 (403)
T ss_pred cCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc-CCCEEEeCCCCccccCceEEE
Confidence 12355689999999999999988766 5889999999999999999998 889999875432 34667778
Q ss_pred EEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 357 SFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 357 ~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
.+++.+..++...| +||.++.|..|+. .++..+|.. +.+||+++.++|++|+++++++|+++++.+
T Consensus 335 ~~~~~~~~~~~~~L~~~gI~v~~g~~~~~------~~~~~~~~~-----~~iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 335 NVEGVHPHDVGTILDEEGIAVRSGHHCAQ------PLMRRFGVP-----ATCRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred EeCCcCHHHHHHHHhhCCEEEcchhhhhH------HHHHHhCCC-----CEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 87766666776666 6999999888854 234445533 799999999999999999999999988765
No 17
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=100.00 E-value=3.1e-41 Score=334.27 Aligned_cols=352 Identities=30% Similarity=0.502 Sum_probs=298.2
Q ss_pred EEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCChHHHHHHHHHH
Q 040741 59 LYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGAS-PKEIIFTSGATESNNVSIKG 137 (457)
Q Consensus 59 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~i~~t~g~T~a~~~al~~ 137 (457)
+|||+++.+++++.+++++.+++...+++|+++.+..+....+.+.++++.+++++|++ ++++++|+|+|+++++++.+
T Consensus 1 ~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~ 80 (373)
T cd06453 1 VYLDNAATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYG 80 (373)
T ss_pred CcccCccccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHH
Confidence 59999999999999999999999888889888777777778889999999999999998 77899999999999999999
Q ss_pred hhhhhcC--CCCEEEEcCCCCcchHHHHHHH-HhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccC
Q 040741 138 VMHFYKD--KKRHVITTQTEHKCVLDSCRHL-QQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQP 214 (457)
Q Consensus 138 ~~~~~~~--~g~~vi~~~~~h~~~~~~~~~~-~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~ 214 (457)
+.. + +|++|+++.++|++........ +..|+++++++.+.++.+|++++++++++++++|++++++|++|.+.|
T Consensus 81 l~~---~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~ 157 (373)
T cd06453 81 LGR---ANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINP 157 (373)
T ss_pred hhh---cCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCC
Confidence 883 2 8999999999999976654433 456999999999888889999999999999999999999999999999
Q ss_pred hHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCCceEEEEecCCCccccccccCCccc------
Q 040741 215 MEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQE------ 288 (457)
Q Consensus 215 l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~------ 288 (457)
+++|.++|+++|+++++|++++.|..++++...++|++++|+||++|+.|+|+++++++.++++.+...++...
T Consensus 158 ~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 237 (373)
T cd06453 158 VKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHKMLGPTGIGVLYGKEELLEEMPPYGGGGEMIEEVSFE 237 (373)
T ss_pred HHHHHHHHHHcCCEEEEEhhhhcCceeeeccccCCCEEEeccccccCCCCcEEEEEchHHhhcCCCeecCCCcccccccc
Confidence 99999999999999999999999988888777889999999999888788999999998888777765544221
Q ss_pred --------cccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEc
Q 040741 289 --------RGIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFA 359 (457)
Q Consensus 289 --------~~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (457)
..+..++++...+.++.++++.+.+ +++++.++.+++++++.+.|.+ ++++.++.++.. ..+++.+.++
T Consensus 238 ~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~-~~~~~~~~~~ 315 (373)
T cd06453 238 ETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSE-IPGVRVYGDAED-RAGVVSFNLE 315 (373)
T ss_pred ccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhc-CCCeEEeCCccc-cCCeEEEEEC
Confidence 1244578888899999999988775 5888999999999999999999 888888854322 3566677776
Q ss_pred cccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHH
Q 040741 360 YVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELT 426 (457)
Q Consensus 360 ~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l 426 (457)
..+..++...| +||.+.+|..|.++ .++..|.. +.||++++.++|++|+|+++++|
T Consensus 316 ~~~~~~i~~~l~~~gi~i~~g~~~~~~------~~~~~~~~-----~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 316 GIHPHDVATILDQYGIAVRAGHHCAQP------LMRRLGVP-----GTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred CcCHHHHHHHHHHCCEEeccCccchhH------HHHHhCCC-----CeEEEEecCCCCHHHHHHHHhhC
Confidence 66667777666 69999888877652 34444433 79999999999999999999864
No 18
>PLN02724 Molybdenum cofactor sulfurase
Probab=100.00 E-value=3.5e-40 Score=352.39 Aligned_cols=370 Identities=21% Similarity=0.305 Sum_probs=297.2
Q ss_pred cccCCCcEEecCCCCCCCCHH-HHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCC--cEEEeCChH
Q 040741 52 VRIAGRPLYLDMQATTPVDPR-VLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPK--EIIFTSGAT 128 (457)
Q Consensus 52 ~~~~~~~i~l~~~~~~~~~~~-v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~--~i~~t~g~T 128 (457)
++...+.+|||+++++++++. +.+++.+++...++||++ .+..+..+.+.++++|+.+++++|++++ +|+||+|+|
T Consensus 29 fp~l~~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s-~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT 107 (805)
T PLN02724 29 FARLKGVVYLDHAGATLYSESQLEAALADFSSNVYGNPHS-QSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGAT 107 (805)
T ss_pred hhhcCCCEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCc-CcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChH
Confidence 444456899999999987764 455555677778899995 5666777778999999999999999765 489999999
Q ss_pred HHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC--------CCCCCCH--HHHHHhc-----
Q 040741 129 ESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG--------ADGIVNL--DELRAAI----- 193 (457)
Q Consensus 129 ~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~--------~~~~~d~--~~le~~i----- 193 (457)
+|+++++.++.. ++|++|+++..+|.++....+.++..|+++.+++++ ..+.+|+ +++++.+
T Consensus 108 ~alnlva~~l~~---~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~ 184 (805)
T PLN02724 108 AALKLVGETFPW---SSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQ 184 (805)
T ss_pred HHHHHHHHHCCC---CCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhc
Confidence 999999888753 789999999999999887666667789999999876 3444544 6677654
Q ss_pred -----CCCceEEEEeccccccccccChHHHHHHHHhc--------CCcEEEehhhhcCCCcccCCCCcccEEEecccccc
Q 040741 194 -----RPDTGLISVMAVNNEIGVIQPMEEIGQICKEF--------KIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIY 260 (457)
Q Consensus 194 -----~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~--------~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~ 260 (457)
.+++++|++++++|.+|.+.|++.|..+++.. ++++++|+||++|..++++.++++|++++|+||++
T Consensus 185 ~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~~~~~Dfl~~S~HK~~ 264 (805)
T PLN02724 185 KREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLSRYPADFVVVSFYKIF 264 (805)
T ss_pred cccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChhhcCCCEEEEecceec
Confidence 24678999999999999999999876555532 36899999999999999999999999999999988
Q ss_pred C-CCCceEEEEecCCCccccccccCCcc-----------------ccccccCCCChhHHHHHHHHHHHHHH-hhHHHHHH
Q 040741 261 G-PKGVGALYMRRRPRIRVEPLINGGGQ-----------------ERGIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKR 321 (457)
Q Consensus 261 g-~~G~G~l~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~ 321 (457)
| |.|+|+++++++....+.|...||+. ..+++.||+++..++++.+|++++.+ +++++.++
T Consensus 265 GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~ 344 (805)
T PLN02724 265 GYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMH 344 (805)
T ss_pred cCCCCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHH
Confidence 7 89999999999888888887777643 24578899999999999999999987 79999999
Q ss_pred HHHHHHHHHHHHhhcCC------CeEEeCCCC-----CcccceEEEEEccccchHH----Hhc---ccCeEecccCccCC
Q 040741 322 ITALHDRLLNGIKEKLD------GVVVNGSME-----RRYIGNLNLSFAYVEGESL----LMG---LKEVAVSSGSACTS 383 (457)
Q Consensus 322 ~~~~~~~l~~~l~~~~~------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~----~~~---l~~i~~~~g~~~~~ 383 (457)
..++.+++.+.|.+ ++ +++++++.. ....+++.|.+.+.++..+ ... .+||.++.|.+|.+
T Consensus 345 ~~~L~~~l~~~L~~-l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~Ca~ 423 (805)
T PLN02724 345 TWALTHYVANSLRN-LKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFCNP 423 (805)
T ss_pred HHHHHHHHHHHHHh-ccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccccCc
Confidence 99999999999998 76 588887541 2356788888876553222 222 27999999999997
Q ss_pred CCCChhHHHHHcCCCc---------------------cCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 384 ASLEPSYVLRALGVDE---------------------DMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 384 ~~~~~~~~l~~~g~~~---------------------~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
+..+ ..+|+.+ ....+.||+|+++++|.+|||++++.|++.+-
T Consensus 424 ~~~~-----~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~ 487 (805)
T PLN02724 424 GACA-----KYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFV 487 (805)
T ss_pred hHHH-----HHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhh
Confidence 5332 1222211 11238999999999999999999999999774
No 19
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=100.00 E-value=6.7e-39 Score=317.92 Aligned_cols=354 Identities=32% Similarity=0.570 Sum_probs=290.6
Q ss_pred EEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCC-CcEEEeCChHHHHHHHHH
Q 040741 59 LYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASP-KEIIFTSGATESNNVSIK 136 (457)
Q Consensus 59 i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~-~~i~~t~g~T~a~~~al~ 136 (457)
+|||+++.+ ++|+.+++++.+++....++++.+.+.......+.+.++++.+++++|+++ ++++|++|+|+++++++.
T Consensus 1 ~yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~ 80 (376)
T TIGR01977 1 IYFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALK 80 (376)
T ss_pred CCccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHH
Confidence 599998877 788999999999988755555543333333445788999999999999864 479999999999999999
Q ss_pred HhhhhhcCCCCEEEEcCCCCcchHHHHHHH-HhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccCh
Q 040741 137 GVMHFYKDKKRHVITTQTEHKCVLDSCRHL-QQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPM 215 (457)
Q Consensus 137 ~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~-~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l 215 (457)
++. ++|++|+++..+|+++...+... +..|.+++.++.+.++.+|+++++++++++++++++++++|++|.+.|+
T Consensus 81 ~~~----~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~~ 156 (376)
T TIGR01977 81 GLL----KEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIKTNTKLIVVSHASNVTGTILPI 156 (376)
T ss_pred hcc----CCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcCCCCeEEEEECCCCCccccCCH
Confidence 876 79999999999999987765543 4559999999988888899999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEecccc-ccCCCCceEEEEecCCCccccccccCCcc-------
Q 040741 216 EEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHK-IYGPKGVGALYMRRRPRIRVEPLINGGGQ------- 287 (457)
Q Consensus 216 ~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K-~~g~~G~G~l~~~~~~~~~~~~~~~~~~~------- 287 (457)
++|.++|+++|+++++|++|++|..++++..+++|++++|+|| ++||.|+|+++++++. .+.+...++..
T Consensus 157 ~~i~~l~~~~~~~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~--~~~~~~~~~~~~~~~~~~ 234 (376)
T TIGR01977 157 EEIGELAQENGIFFILDAAQTAGVIPIDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGI--KLKPLKSGGTGSHSALID 234 (376)
T ss_pred HHHHHHHHHcCCEEEEEhhhccCccCCCchhcCCCEEEecccccccCCCCceEEEEcCCc--CcCceecCCCcccccccc
Confidence 9999999999999999999999999999888899999999999 5678899999998875 23343332211
Q ss_pred -----ccccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCC-CcccceEEEEEcc
Q 040741 288 -----ERGIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSME-RRYIGNLNLSFAY 360 (457)
Q Consensus 288 -----~~~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 360 (457)
..++..++++...+.++..+++++.+ +++++.++..++++++.+.|.+ .+++.++++.+ ....+++.+.+++
T Consensus 235 ~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~-~~~~~~~~~~~~~~~~~~v~~~~~~ 313 (376)
T TIGR01977 235 QPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLRE-INKVKIYGPADPANRVGVVSFTVEG 313 (376)
T ss_pred ccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc-CCCeEEeCCCCccccCCeEEEEECC
Confidence 12456789999999999999998876 5889999999999999999998 88999887532 2335677777776
Q ss_pred ccchHHHhcc--c-CeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHH
Q 040741 361 VEGESLLMGL--K-EVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVK 428 (457)
Q Consensus 361 ~~~~~~~~~l--~-~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~ 428 (457)
.+..++...| + ||.+..|.+|++. ....+|. ...+.||++++.++|.+||++++++|++
T Consensus 314 ~~~~~~~~~L~~~~gi~v~~g~~~~~~------~~~~~g~---~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 314 IDSEEVADILDEKFDIATRTGLHCAPL------AHKTIGT---FATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred CCHHHHHHHHhccCCEEEEcccccchH------HHHHhCC---CCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 6777777777 4 8999999888752 2233432 2347999999999999999999999975
No 20
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=100.00 E-value=5.2e-39 Score=320.96 Aligned_cols=357 Identities=21% Similarity=0.322 Sum_probs=290.1
Q ss_pred cEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHH
Q 040741 58 PLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKG 137 (457)
Q Consensus 58 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~ 137 (457)
.+|||+++++++|+++++++.+++.....++.+ .+.......+.++++++.+++++|++++++++++|+|+++++++.+
T Consensus 18 ~~yl~~~~~~~~p~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~ 96 (397)
T TIGR01976 18 RVFFDNPAGTQIPQSVADAVSAALTRSNANRGG-AYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRA 96 (397)
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhcCCCCCC-CchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHH
Confidence 699999999999999999999998765555543 2333334457789999999999999877899999999999887777
Q ss_pred hhhhhcCCCCEEEEcCCCCcchHHHH-HHHHhcCcEEEEEeCCC-CCCCCHHHHHHhcCCCceEEEEeccccccccccCh
Q 040741 138 VMHFYKDKKRHVITTQTEHKCVLDSC-RHLQQEGFEITYLPVGA-DGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPM 215 (457)
Q Consensus 138 ~~~~~~~~g~~vi~~~~~h~~~~~~~-~~~~~~G~~v~~v~~~~-~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l 215 (457)
+.... ++|++|+++.++|++....+ ..++..|+++++++.+. ++.+|++++++++++++++|++++++|++|.+.|+
T Consensus 97 ~~~~~-~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~ 175 (397)
T TIGR01976 97 ISRRW-GPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLSPRTRLVAVTAASNTLGSIVDL 175 (397)
T ss_pred HHhcC-CCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcCCCceEEEEeCCCCCCCccCCH
Confidence 63111 78999999999999987665 34466799999999875 68899999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCCceEEEEecCCCccccccccCC---ccccccc
Q 040741 216 EEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGG---GQERGIR 292 (457)
Q Consensus 216 ~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~---~~~~~~~ 292 (457)
++|.++|+++|+++++|++|+.|..++++.++++|++++|+||++|++ +|+++++++.++.+.+....+ ....++.
T Consensus 176 ~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~-~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~ 254 (397)
T TIGR01976 176 AAITELVHAAGALVVVDAVHYAPHGLIDVQATGADFLTCSAYKFFGPH-MGILWGRPELLMNLPPYKLTFSYDTGPERFE 254 (397)
T ss_pred HHHHHHHHHcCCEEEEehhhhccccCCCHHHcCCCEEEEechhhcCCc-eEEEEEcHHHHhhCCCccccCccCCCcchhc
Confidence 999999999999999999999988888888889999999999999986 899999988776666543322 1223477
Q ss_pred cCCCChhHHHHHHHHHHHHHHh---------------hHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCC-CcccceEEE
Q 040741 293 SGTLPTPLIVGFGSACEIAKKE---------------MDYDHKRITALHDRLLNGIKEKLDGVVVNGSME-RRYIGNLNL 356 (457)
Q Consensus 293 ~~t~~~~~~~al~~al~~~~~~---------------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~ 356 (457)
.||+++..++++.+|++++.+. +++..++..++++++++.|++ +++++++++.+ ....+++.+
T Consensus 255 ~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~ 333 (397)
T TIGR01976 255 LGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSD-LPGVTLYGVARLAARVPTVSF 333 (397)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEeCCCCccCCCceEEE
Confidence 8999999999999999887542 566777888899999999998 77898887522 223556666
Q ss_pred EEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHH
Q 040741 357 SFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELT 426 (457)
Q Consensus 357 ~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l 426 (457)
.+.+.+..++...| +||.++.+..|.+ .+++.+|+.. ..++|||+++.++|++|+++++++|
T Consensus 334 ~~~~~~~~~l~~~L~~~gI~v~~~~~~~~------~~~~~~~~~~--~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 334 TVHGLPPQRVVRRLADQGIDAWAGHFYAV------RLLRRLGLND--EGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred EeCCcCHHHHHHHHHHCCeEEEeCccchH------HHHHHhCCCC--CCCeEEEEeeccCCHHHHHHHHHhC
Confidence 66655567777777 6999998877753 4567777642 2368999999999999999999864
No 21
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=100.00 E-value=1.6e-37 Score=310.37 Aligned_cols=342 Identities=17% Similarity=0.202 Sum_probs=267.3
Q ss_pred CCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhh-hHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHH
Q 040741 56 GRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGW-ESEVAVETARSQIADLIGASPKEIIFTSGATESNNVS 134 (457)
Q Consensus 56 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~a 134 (457)
.+++|||+++.+++|+.+.+++.+++... +++.++.+..+. .+......+++ + +++|+++++++|++|+|++++++
T Consensus 26 ~~~iyld~~a~g~~p~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~~~v~~~~~~t~~l~~~ 102 (406)
T TIGR01814 26 NAVIYLDGNSLGLMPKAARNALKEELDKW-AKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKEDEVVVMNTLTINLHLL 102 (406)
T ss_pred CCcEEecCCCcCcCcHHHHHHHHHHHHHH-HHhhhccCccCCCChhhhhhhhcc-c-cccCCCCCcEEEeCCchHHHHHH
Confidence 56899998888899999999999988653 333222222211 22233444444 5 89999999999999999999999
Q ss_pred HHHhhhhhcCC---CCEEEEcCCCCcchHHHHH-HHHhcCcEE----EEEeCCCCCCCCHHHHHHhc---CCCceEEEEe
Q 040741 135 IKGVMHFYKDK---KRHVITTQTEHKCVLDSCR-HLQQEGFEI----TYLPVGADGIVNLDELRAAI---RPDTGLISVM 203 (457)
Q Consensus 135 l~~~~~~~~~~---g~~vi~~~~~h~~~~~~~~-~~~~~G~~v----~~v~~~~~~~~d~~~le~~i---~~~t~li~i~ 203 (457)
+.++. ++ +++|+++..+|++....+. .++..|+++ +.++.+.++.+|++++++++ +++|++|+++
T Consensus 103 ~~~~~----~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~ 178 (406)
T TIGR01814 103 LASFY----KPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKNGDDIAVILLS 178 (406)
T ss_pred HHHhc----CCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhcCCCeEEEEEe
Confidence 99874 33 3478899999999888765 345668887 56666667788999998887 4789999999
Q ss_pred ccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccc-cCCCCceEEEEecCCCccccccc
Q 040741 204 AVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKI-YGPKGVGALYMRRRPRIRVEPLI 282 (457)
Q Consensus 204 ~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~-~g~~G~G~l~~~~~~~~~~~~~~ 282 (457)
+++|.+|.+.|+++|.++|+++|+++++|++|++|..++++..+++|++++|+||+ +||+| |.++++++....+.+..
T Consensus 179 ~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~gvD~~~~s~hK~l~g~pG-~~l~v~~~~~~~~~p~~ 257 (406)
T TIGR01814 179 GVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDWGVDFACWCTYKYLNAGPG-AGAFVHEKHAHTERPRL 257 (406)
T ss_pred ccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccCCCCEEEEcCccccCCCCC-eEEEEehhhhhhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999995 56778 77777665554555543
Q ss_pred cCC----------------ccccccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcC----CCeE
Q 040741 283 NGG----------------GQERGIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKL----DGVV 341 (457)
Q Consensus 283 ~~~----------------~~~~~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~----~~~~ 341 (457)
.|| ....+++.||+++..++++.++++++.+ +++++.++.+++.+++++.|.+ + +++.
T Consensus 258 ~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~-~~~~~~~~~ 336 (406)
T TIGR01814 258 AGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKA-RCGGPPVLT 336 (406)
T ss_pred CcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHh-hcCCCCceE
Confidence 332 1223566799999999999999999865 6899999999999999999987 5 3588
Q ss_pred EeCCCC-CcccceEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEec-CCCCCHH
Q 040741 342 VNGSME-RRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGI-GRFTTEA 417 (457)
Q Consensus 342 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~-~~~~t~e 417 (457)
++++.+ ...++++.+.++ .+.+++...| +||.+... ..+.|||++ +.++|++
T Consensus 337 i~~~~~~~~r~~~v~~~~~-~~~~~~~~~L~~~gi~v~~~-----------------------~~~~iRiS~~~~~nt~~ 392 (406)
T TIGR01814 337 IITPRDHAQRGCQLSLTHP-VPGKAVFQALIKRGVIGDKR-----------------------EPSVIRVAPVPLYNTFV 392 (406)
T ss_pred EeCCCChhhcCCeEEEEec-CCHHHHHHHHHHCCEEEecc-----------------------CCCeEEEechhccCCHH
Confidence 887543 223566777777 5677777776 57765311 126899999 5899999
Q ss_pred HHHHHHHHHHHHH
Q 040741 418 EVDRAIELTVKQV 430 (457)
Q Consensus 418 did~~~~~l~~~~ 430 (457)
|||+++++|++.+
T Consensus 393 did~l~~~l~~~~ 405 (406)
T TIGR01814 393 DVYDAVNVLEEIL 405 (406)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998764
No 22
>PLN02409 serine--glyoxylate aminotransaminase
Probab=100.00 E-value=4.3e-35 Score=291.77 Aligned_cols=341 Identities=13% Similarity=0.151 Sum_probs=277.6
Q ss_pred cEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCC-CcEEEeCChHHHHHHHHH
Q 040741 58 PLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASP-KEIIFTSGATESNNVSIK 136 (457)
Q Consensus 58 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~-~~i~~t~g~T~a~~~al~ 136 (457)
..+|..+++..++++|+++|......+ .+....+.++++++.+++++|+++ +.++++++||.+++.++.
T Consensus 9 ~~~l~~pGP~~~~~~V~~a~~~~~~~~----------~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~ 78 (401)
T PLN02409 9 RNHLFVPGPVNIPERVLRAMNRPNEDH----------RSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALT 78 (401)
T ss_pred CceeccCCCCCCCHHHHHHhcCCCCCC----------CCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHH
Confidence 457889999999999999997754221 134566899999999999999975 468999999999999998
Q ss_pred HhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC----CceEEEEeccccccccc
Q 040741 137 GVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP----DTGLISVMAVNNEIGVI 212 (457)
Q Consensus 137 ~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~----~t~li~i~~~~~~~G~~ 212 (457)
++. ++||+|++..+.|++... ...++..|++++.++.+.++.+|++++++++++ ++++|++++++|++|.+
T Consensus 79 ~~~----~~Gd~Vlv~~~~~~~~~~-~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~ 153 (401)
T PLN02409 79 NTL----SPGDKVVSFRIGQFSLLW-IDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVT 153 (401)
T ss_pred hcC----CCCCEEEEeCCCchhHHH-HHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeeccccccc
Confidence 887 899999999988877653 245566799999999887666899999999986 78999999999999999
Q ss_pred cChHHHHHH--HHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccc-cCCCCceEEEEecCCCccccccc-----cC
Q 040741 213 QPMEEIGQI--CKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKI-YGPKGVGALYMRRRPRIRVEPLI-----NG 284 (457)
Q Consensus 213 ~~l~~i~~l--~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~-~g~~G~G~l~~~~~~~~~~~~~~-----~~ 284 (457)
.|+++|.++ |+++|+++++|+++++|..++++.++++|++++|+||+ +||.|+|+++++++.++++.+.. .+
T Consensus 154 ~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~~~~~~ 233 (401)
T PLN02409 154 NDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEASKTAKSPRVFFD 233 (401)
T ss_pred CCHHHHHHHHhhhccCcEEEEEcccccCCccccccccCccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCCCCeecC
Confidence 999999999 99999999999999999999999999999999999994 57889999999988766654321 11
Q ss_pred Ccc-----cc-ccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCC-CCcccceEEE
Q 040741 285 GGQ-----ER-GIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSM-ERRYIGNLNL 356 (457)
Q Consensus 285 ~~~-----~~-~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~ 356 (457)
+.. +. .+..+|+++..++++..+++++.+ +++++.++.+++++++++.|.+ + ++.++++. ..+.+.++.+
T Consensus 234 ~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~-~-g~~~~~~~~~~~s~~v~~~ 311 (401)
T PLN02409 234 WADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEA-W-GLKLCTKKPEWRSDTVTAV 311 (401)
T ss_pred HHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH-c-CCeeccCChhhcccceEEE
Confidence 100 01 122568999999999999999776 6999999999999999999988 5 88888743 3344455556
Q ss_pred EEc-cccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 357 SFA-YVEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 357 ~~~-~~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
.++ +.+..++...+ .+|.+..|... ..++.+||++..+++.+|+..++.+|++++++
T Consensus 312 ~~p~~~~~~~l~~~l~~~~~i~i~~G~~~-------------------~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~ 372 (401)
T PLN02409 312 VVPEGIDSAEIVKNAWKKYNLSLGLGLNK-------------------VAGKVFRIGHLGNVNELQLLGALAGVEMVLKD 372 (401)
T ss_pred eCCCCCCHHHHHHHHHHhCCEEEEcCCCc-------------------ccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 553 45666666555 48888877532 22489999999999999999999999999987
Q ss_pred HH
Q 040741 433 LR 434 (457)
Q Consensus 433 ~~ 434 (457)
++
T Consensus 373 ~g 374 (401)
T PLN02409 373 VG 374 (401)
T ss_pred cC
Confidence 76
No 23
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=100.00 E-value=2e-34 Score=283.71 Aligned_cols=333 Identities=18% Similarity=0.253 Sum_probs=261.3
Q ss_pred CCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCC-cEEEeCChHHHHHHHHHHhhhh
Q 040741 63 MQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPK-EIIFTSGATESNNVSIKGVMHF 141 (457)
Q Consensus 63 ~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~-~i~~t~g~T~a~~~al~~~~~~ 141 (457)
.+++.++++++++++.+.+.. +. +....+..+++++.+++++|++++ .+++++|||+|+.+++.++.
T Consensus 4 ~~~~~~~~~~v~~a~~~~~~~---------~~-~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~-- 71 (356)
T cd06451 4 IPGPSNVPPRVLKAMNRPMLG---------HR-SPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLL-- 71 (356)
T ss_pred cCCCcCCCHHHHHHhCCCccC---------CC-CHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhC--
Confidence 467778999999999765421 11 223456789999999999999544 58899999999999999987
Q ss_pred hcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC-CceEEEEeccccccccccChHHHHH
Q 040741 142 YKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP-DTGLISVMAVNNEIGVIQPMEEIGQ 220 (457)
Q Consensus 142 ~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~-~t~li~i~~~~~~~G~~~~l~~i~~ 220 (457)
.+|+.|++..+.|++... ...++..|+++++++.+.++.+|++++++++++ ++++|++++++|++|.+.|+++|.+
T Consensus 72 --~~g~~vl~~~~~~~~~~~-~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~ 148 (356)
T cd06451 72 --EPGDKVLVGVNGVFGDRW-ADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGA 148 (356)
T ss_pred --CCCCEEEEecCCchhHHH-HHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHH
Confidence 789999999888876321 133445599999999887788999999999987 8999999999999999999999999
Q ss_pred HHHhcCCcEEEehhhhcCCCcccCCCCcccEEEecccccc-CCCCceEEEEecCCCccccc--cccCCc----------c
Q 040741 221 ICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIY-GPKGVGALYMRRRPRIRVEP--LINGGG----------Q 287 (457)
Q Consensus 221 l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~-g~~G~G~l~~~~~~~~~~~~--~~~~~~----------~ 287 (457)
+|+++|+++++|++|++|..+++....++|++++|+||++ +|.|+|+++++++..+++.. ...++. .
T Consensus 149 ~a~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (356)
T cd06451 149 LAKKHDALLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWG 228 (356)
T ss_pred HHHhcCCEEEEeeehhccCccccccccCccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhc
Confidence 9999999999999999998888877778999999999954 57789999999876655542 111110 0
Q ss_pred ccccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEc-cccchH
Q 040741 288 ERGIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFA-YVEGES 365 (457)
Q Consensus 288 ~~~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 365 (457)
...+..+++++..++++.++++++.+ ++++..++.+++++++.+.|.+ . ++.+.+++..+.+.++.+.++ +.+..+
T Consensus 229 ~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (356)
T cd06451 229 EGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEA-L-GLKLLAKPELRSPTVTAVLVPEGVDGDE 306 (356)
T ss_pred ccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH-c-CCeeccCcccCCCceEEEECCCCCCHHH
Confidence 11245678888888999999988765 5788899999999999999998 5 787776543333333344443 345567
Q ss_pred HHhcc--c-CeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 366 LLMGL--K-EVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 366 ~~~~l--~-~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
+...| + ||.+.+|..|. ..++||++++.++++||+++++++|+++++
T Consensus 307 ~~~~L~~~~gI~~~~g~~~~-------------------~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 307 VVRRLMKRYNIEIAGGLGPT-------------------AGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred HHHHHHHhCCEEEecccccc-------------------cCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 77776 5 89888775432 126999999999999999999999998763
No 24
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=2.5e-33 Score=274.36 Aligned_cols=335 Identities=16% Similarity=0.184 Sum_probs=266.4
Q ss_pred CCCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCc--EEEeCChHHHHH
Q 040741 55 AGRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKE--IIFTSGATESNN 132 (457)
Q Consensus 55 ~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~--i~~t~g~T~a~~ 132 (457)
..+..|+.++.+...+...++.+..+..+.+|||.+ .+.++....+...++++++++++|+++++ .+||+|||+|++
T Consensus 20 ~~~~~~~g~p~~~~~~~~~~~~~~~~~~~n~gnp~~-~~~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~ 98 (380)
T PRK02769 20 HNQYFNVGYPEAADFDYSALKRFFSFSINNCGDPYS-KSNYPLNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNL 98 (380)
T ss_pred HhhhcccCCCchhhcCHHHHHHHHHhhhccCCCccc-cCCCCCChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHH
Confidence 345578888888888878888888888888899977 67777777788889999999999997655 599999999998
Q ss_pred HHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCC---ceEEEEecccccc
Q 040741 133 VSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPD---TGLISVMAVNNEI 209 (457)
Q Consensus 133 ~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~---t~li~i~~~~~~~ 209 (457)
.++...... .++++|++++.+|+++..+++.+ |.+...++.+.+|.+|+++|+++|+++ |.+|++++++|++
T Consensus 99 ~a~~~ar~~--~~~~~ii~s~~~H~Sv~ka~~~l---g~~~~~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~t 173 (380)
T PRK02769 99 YGCYLAREL--FPDGTLYYSKDTHYSVSKIARLL---RIKSRVITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMT 173 (380)
T ss_pred HHHHHHHHh--CCCcEEEeCCCceehHHHHHHHc---CCCCceeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCC
Confidence 887766542 45789999999999999999888 777777888888999999999999876 9999999999999
Q ss_pred ccccChHHHHHHHHhcC---CcEEEehhhhcCCCc-------ccCCCCcccEEEeccccccC-CCCceEEEEecCCCccc
Q 040741 210 GVIQPMEEIGQICKEFK---IPFHTDAAQALGKIP-------VDVEKWNVSLMSLSGHKIYG-PKGVGALYMRRRPRIRV 278 (457)
Q Consensus 210 G~~~~l~~i~~l~~~~~---v~li~D~a~~~g~~~-------~~~~~~~~Di~~~s~~K~~g-~~G~G~l~~~~~~~~~~ 278 (457)
|.+.|+++|.++|++|| +++|+|+|++.+..+ +++.. ++|.+++|+||++| |.|+|+++++++...++
T Consensus 174 G~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~-~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~ 252 (380)
T PRK02769 174 GAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFAD-GIDSIAISGHKFIGSPMPCGIVLAKKKYVERI 252 (380)
T ss_pred cccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccC-CCCEEEECCcccCCCCCCcEEEEEehhhhhhc
Confidence 99999999999999998 699999999998875 56655 89999999999765 99999999998766555
Q ss_pred cccccCCccccccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEE
Q 040741 279 EPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLS 357 (457)
Q Consensus 279 ~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 357 (457)
.+...--........|+.+...++++..+++.+.. ++.++.++..++++++.+.|++ .++.+..++. .+ .+.
T Consensus 253 ~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~--~g~~~~~~p~---~~--~v~ 325 (380)
T PRK02769 253 SVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQA--NGIPAWRNPN---SI--TVV 325 (380)
T ss_pred ccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh--CCCEEEcCCC---ce--EEE
Confidence 33111000111123677887778888888887654 6999999999999999999988 5888876643 23 344
Q ss_pred EccccchHHHhcccCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 358 FAYVEGESLLMGLKEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 358 ~~~~~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
|+..+ ..+. ++-.+.. ....+|+++...+++|.||.+++.|.+...
T Consensus 326 f~~~~-~~~~---~~w~l~~------------------------~~~~~hi~~~~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 326 FPCPS-ERIW---KKWHLAT------------------------SGNQAHIITMPHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred EcCCC-HHHH---hCeeEcc------------------------cCCEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 54333 2222 3333321 015899999999999999999999988765
No 25
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=100.00 E-value=1.5e-33 Score=278.00 Aligned_cols=333 Identities=17% Similarity=0.196 Sum_probs=256.7
Q ss_pred EecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCC--cEEEeCChHHHHHHHHHH
Q 040741 60 YLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPK--EIIFTSGATESNNVSIKG 137 (457)
Q Consensus 60 ~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~--~i~~t~g~T~a~~~al~~ 137 (457)
+|-.+++..++++|.++|..... .+ +..+.+.++++++.+++++|++++ ++++|+|||+|++.++.+
T Consensus 5 ~l~~pgp~~~~~~v~~~~~~~~~-~~----------~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~ 73 (363)
T TIGR02326 5 LLLTPGPLTTSRTVKEAMLFDWC-TW----------DSDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGS 73 (363)
T ss_pred eEecCCCCCCCHHHHHHhCCCCC-CC----------ChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHh
Confidence 35577788888999988766541 11 235567899999999999999764 699999999999999999
Q ss_pred hhhhhcCCCCEE-EEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC--CceEEEEeccccccccccC
Q 040741 138 VMHFYKDKKRHV-ITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP--DTGLISVMAVNNEIGVIQP 214 (457)
Q Consensus 138 ~~~~~~~~g~~v-i~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~--~t~li~i~~~~~~~G~~~~ 214 (457)
+. .+++++ ++...+|+... ...++..|.+++.++.+.++.+|+++++++++. +++++++++++|++|.+.|
T Consensus 74 l~----~~~~~vlv~~~~~~~~~~--~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~ 147 (363)
T TIGR02326 74 AV----PKDGKLLVVINGAYGARI--VQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNP 147 (363)
T ss_pred cC----CCCCeEEEEeCChhhHHH--HHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc
Confidence 87 566665 44555555432 133355699999999988888999999999875 4578899999999999999
Q ss_pred hHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEecccc-ccCCCCceEEEEecCCCccccccccCCc-------
Q 040741 215 MEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHK-IYGPKGVGALYMRRRPRIRVEPLINGGG------- 286 (457)
Q Consensus 215 l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K-~~g~~G~G~l~~~~~~~~~~~~~~~~~~------- 286 (457)
+++|.++|+++|+++++|++|++|..++++..+++|++++|+|| ++||+|+|+++++++..+++.+...+..
T Consensus 148 i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (363)
T TIGR02326 148 IEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAELHIDYLISSANKCIQGVPGFGFVIARQAELAACKGNARSLSLDLYDQW 227 (363)
T ss_pred HHHHHHHHHHcCCEEEEEccccccCcccchhhcCccEEEecCccccccCCcceEEEECHHHHHHhhcCCCceeecHHHHH
Confidence 99999999999999999999999999999998999999999999 5689999999999876655432211100
Q ss_pred ----cccccccCCCChhHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcc
Q 040741 287 ----QERGIRSGTLPTPLIVGFGSACEIAKK--EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAY 360 (457)
Q Consensus 287 ----~~~~~~~~t~~~~~~~al~~al~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (457)
...+.+..+++.+.+.++.++++.+.+ +++++.++++++++++++.|++ + ++.++.+++.+.+.++.+.++.
T Consensus 228 ~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~ 305 (363)
T TIGR02326 228 RCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRA-L-GFEPLLDDEIQSPIITSFYSPE 305 (363)
T ss_pred HHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHH-c-CCeeccCcccCCceEEEEECCC
Confidence 011123347788899999999988755 3788999999999999999988 4 7777655443444455566653
Q ss_pred ---ccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 361 ---VEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 361 ---~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
.+...+.+.| +||.+.+|..+. .+.|||++..+++.+|+++++++|++++.
T Consensus 306 ~~~~~~~~v~~~L~~~gi~v~~g~~~~--------------------~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 306 DPDYRFADFYQRLKEQGFVIYPGKVSQ--------------------VDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred CCCCCHHHHHHHHHHCCEEEECCcCCC--------------------CCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 2345566666 689988775321 26899998777899999999999988753
No 26
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=4.3e-33 Score=276.13 Aligned_cols=350 Identities=15% Similarity=0.110 Sum_probs=259.4
Q ss_pred CCcEEecCCC--------CCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCC-C-CcEEE--
Q 040741 56 GRPLYLDMQA--------TTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGAS-P-KEIIF-- 123 (457)
Q Consensus 56 ~~~i~l~~~~--------~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~-~~i~~-- 123 (457)
...+|+|+.. ++++.|++.++|.+.+...++||++. +... +..+++++++++++|++ + +++.|
T Consensus 32 ~~~iyld~~a~~~~~~~~tt~~~p~~~~~~~~~l~~~~~np~s~----~~~~-~le~~~~~~la~llg~~~~~~~~~g~~ 106 (431)
T TIGR01788 32 HDELSLDGNPRLNLATFVTTWMEPEARKLMDETINKNMIDKDEY----PQTA-EIENRCVNMLADLWHAPAKDAEAVGTS 106 (431)
T ss_pred HHHhhhcCCcceeeeeeeCCCCCHHHHHHHHHHHhcCCCCcccC----ccHH-HHHHHHHHHHHHHhCCCCCCCCCeEEE
Confidence 3467899988 89999999999999998778888762 3344 78899999999999997 3 45555
Q ss_pred eCChHHHHHHHHHHhhhhhc----C-----CCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCC-CCCCHHHHHHhc
Q 040741 124 TSGATESNNVSIKGVMHFYK----D-----KKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGAD-GIVNLDELRAAI 193 (457)
Q Consensus 124 t~g~T~a~~~al~~~~~~~~----~-----~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~-~~~d~~~le~~i 193 (457)
|+|||+|+++++.+....+. . .+.+|+++..+|+++..+++.+ |+++++++++.+ +.+|+++|+++|
T Consensus 107 TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~l---g~~v~~i~~d~~~~~vd~~~L~~~i 183 (431)
T TIGR01788 107 TIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYF---DVELREVPMDPGRYVIDPEQVVEAV 183 (431)
T ss_pred echHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHc---CceeEEEecCCCceeeCHHHHHHHH
Confidence 89999999999987653211 1 1348999999999999998877 999999999875 589999999999
Q ss_pred CCCceEEEEeccccccccccChHHHHHHHHhc------CCcEEEehhhh-------cCCCcccCCCCcccEEEeccccc-
Q 040741 194 RPDTGLISVMAVNNEIGVIQPMEEIGQICKEF------KIPFHTDAAQA-------LGKIPVDVEKWNVSLMSLSGHKI- 259 (457)
Q Consensus 194 ~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~------~v~li~D~a~~-------~g~~~~~~~~~~~Di~~~s~~K~- 259 (457)
+++|.+|++++++|.+|.+.|+++|+++|+++ |+++|+|+||+ .+..+.++...++|.+++|+||+
T Consensus 184 ~~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~ 263 (431)
T TIGR01788 184 DENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYG 263 (431)
T ss_pred hhCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhcc
Confidence 99999999999999999999999999999999 99999999999 44555555555789999999995
Q ss_pred cCCCCceEEEEecC--CCccccc--cccCCcc-ccccccCCCChhHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHH
Q 040741 260 YGPKGVGALYMRRR--PRIRVEP--LINGGGQ-ERGIRSGTLPTPLIVGFGSACEI-AKKEMDYDHKRITALHDRLLNGI 333 (457)
Q Consensus 260 ~g~~G~G~l~~~~~--~~~~~~~--~~~~~~~-~~~~~~~t~~~~~~~al~~al~~-~~~~~~~~~~~~~~~~~~l~~~l 333 (457)
+||.|+|+++++++ +...+.. ...++.. ...... +-+.....++...+.. ...++.++.++..++++++.+.|
T Consensus 264 ~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~-sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L 342 (431)
T TIGR01788 264 LVYPGVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNF-SRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEI 342 (431)
T ss_pred CCCCCcEEEEEeChHHcchhheecccccCCCCCCcceec-CchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH
Confidence 59999999999875 2122211 1222211 011111 1121122222222222 23579999999999999999999
Q ss_pred hhcCCCeEEeCCCCCcccceEEEEEcc-----ccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeE
Q 040741 334 KEKLDGVVVNGSMERRYIGNLNLSFAY-----VEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSI 406 (457)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~i 406 (457)
++ .++++++++. ...+++.|.+.+ .+..++...| +|+.+..-. ++. .-.+.-.+
T Consensus 343 ~~-~~~~el~~~~--~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~--~p~--------------~~~~~~~l 403 (431)
T TIGR01788 343 AK-LGPFEIISDG--SGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYT--LPK--------------NAEDIVVM 403 (431)
T ss_pred Hh-CCCEEEeeCC--CCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCC--CCC--------------ccCCeEEE
Confidence 99 8999998752 236777777763 3334566666 455432110 000 01123578
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 407 RFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 407 Ri~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
|+++...++++.++.+++.|++++..+
T Consensus 404 R~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 404 RIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred EEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 999988899999999999999998765
No 27
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.6e-33 Score=263.26 Aligned_cols=340 Identities=19% Similarity=0.248 Sum_probs=281.3
Q ss_pred EecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCC-CcEEEeCChHHHHHHHHHHh
Q 040741 60 YLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASP-KEIIFTSGATESNNVSIKGV 138 (457)
Q Consensus 60 ~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~-~~i~~t~g~T~a~~~al~~~ 138 (457)
.|-.+|+.+++++|+++|...... .....+...+.++.+.+..+++.+. +-++++++||.|++.++.++
T Consensus 7 ~Ll~PGP~~v~~~V~~am~~~~~~----------h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl 76 (383)
T COG0075 7 LLLTPGPVPVPPRVLLAMARPMVG----------HRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASL 76 (383)
T ss_pred eeeeCCCCCCCHHHHHHhcCCCCC----------CCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhc
Confidence 566788999999999999887643 2245667899999999999999873 45888899999999999999
Q ss_pred hhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcC--CCceEEEEeccccccccccChH
Q 040741 139 MHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIR--PDTGLISVMAVNNEIGVIQPME 216 (457)
Q Consensus 139 ~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~--~~t~li~i~~~~~~~G~~~~l~ 216 (457)
. +|||+|++....-++... .+.++..|++++.+..+.+..+|+++++++++ ++.++|+++|..++||+..|++
T Consensus 77 ~----~pgdkVLv~~nG~FG~R~-~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~ 151 (383)
T COG0075 77 V----EPGDKVLVVVNGKFGERF-AEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLK 151 (383)
T ss_pred c----CCCCeEEEEeCChHHHHH-HHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHH
Confidence 9 899999887665555543 36678889999999999988999999999998 4467999999999999999999
Q ss_pred HHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEecccc-ccCCCCceEEEEecCCCccccccccC-C---------
Q 040741 217 EIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHK-IYGPKGVGALYMRRRPRIRVEPLING-G--------- 285 (457)
Q Consensus 217 ~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K-~~g~~G~G~l~~~~~~~~~~~~~~~~-~--------- 285 (457)
+|+++||+||.++++|++.++|..++++++|++|+++.+++| +.+|+|+|++.++++..+++...... +
T Consensus 152 ~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~ 231 (383)
T COG0075 152 EIAKAAKEHGALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKKWLK 231 (383)
T ss_pred HHHHHHHHcCCEEEEEecccCCCcccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceeecHHHHHH
Confidence 999999999999999999999999999999999999999999 56799999999999876665422111 1
Q ss_pred cccc-ccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEc-ccc
Q 040741 286 GQER-GIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFA-YVE 362 (457)
Q Consensus 286 ~~~~-~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 362 (457)
.++. +.++.|+++..+.++..|++.+.+ +++.+.+++++++++++++++. .|+.++.+++...+.+..+..+ +++
T Consensus 232 ~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~a--lGl~~~~~~~~~s~tvta~~~P~g~~ 309 (383)
T COG0075 232 YMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEA--LGLELFADPERRSPTVTAIKVPEGVD 309 (383)
T ss_pred HHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH--cCCccccCcccCCCceEEEECCCCCC
Confidence 1112 567789999999999999999886 5999999999999999999999 6899988655666666666664 344
Q ss_pred chHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHh
Q 040741 363 GESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLRE 435 (457)
Q Consensus 363 ~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~ 435 (457)
+.+....+ .++.+.+|. ....+..+||+.....+.+|+.+++.+|+.++++++.
T Consensus 310 ~~~~~~~~~~~~g~~i~gg~-------------------~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g~ 366 (383)
T COG0075 310 DKKVRRALLKEYGVEIAGGQ-------------------GPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELGV 366 (383)
T ss_pred cHHHHHHHHHhCCEEecccc-------------------cccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcCC
Confidence 43343333 477776664 3345589999998899999999999999999998754
No 28
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=100.00 E-value=9.8e-33 Score=273.88 Aligned_cols=343 Identities=15% Similarity=0.177 Sum_probs=254.3
Q ss_pred CCCcEEecC-CCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHH
Q 040741 55 AGRPLYLDM-QATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNV 133 (457)
Q Consensus 55 ~~~~i~l~~-~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~ 133 (457)
...+|.||. +..+|+++++++++.++.. .+++|.+-.+..++...+.+.++++.+++++|+++ ++|++|+|+|+.+
T Consensus 17 ~~~~~~~~~~~~~~p~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~~--~~~~~g~t~a~~~ 93 (387)
T PRK09331 17 EEEFINLDPIQRGGILTPEARKALIEYGD-GYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMDE--ARVTHGAREGKFA 93 (387)
T ss_pred cccccccChhhcCCCCCHHHHHHHHHHHh-ccCCCcccccccccccChHHHHHHHHHHHHhCCCc--EEEeCCHHHHHHH
Confidence 345666764 4456999999999999984 45666543555566666789999999999999964 8899999999999
Q ss_pred HHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeC--CCCCCCCHHHHHHhcCC-------CceEEEEec
Q 040741 134 SIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPV--GADGIVNLDELRAAIRP-------DTGLISVMA 204 (457)
Q Consensus 134 al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~le~~i~~-------~t~li~i~~ 204 (457)
++.++. ++|++|+++..+|.+...+++.. |+++++++. +.++.+|++++++++++ ++++|++++
T Consensus 94 al~~l~----~~gd~Vlv~~~~h~s~~~~~~~~---G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~ 166 (387)
T PRK09331 94 VMHSLC----KKGDYVVLDGLAHYTSYVAAERA---GLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTH 166 (387)
T ss_pred HHHHhc----CCCCEEEECCCchHHHHHHHHHc---CCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEEC
Confidence 999997 89999999999999998876554 999999998 66788999999999863 689999999
Q ss_pred cccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEecccccc-CCCCceEEEEecCCCcccccccc
Q 040741 205 VNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIY-GPKGVGALYMRRRPRIRVEPLIN 283 (457)
Q Consensus 205 ~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~-g~~G~G~l~~~~~~~~~~~~~~~ 283 (457)
++|++|.+.|+++|.++|++||+++|+|++|+.|..+++...+++|++++|+||++ ++.|+|+++++++.++++.....
T Consensus 167 ~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~~~i~~~~~~~~ 246 (387)
T PRK09331 167 VDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKKLGADFIVGSGHKSMAASAPSGVLATTEEYADKVFRTSR 246 (387)
T ss_pred CCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhcccccC
Confidence 99999999999999999999999999999999999998888889999999999954 56789999999876665543322
Q ss_pred CCcccc-ccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccc-
Q 040741 284 GGGQER-GIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYV- 361 (457)
Q Consensus 284 ~~~~~~-~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 361 (457)
...... ....++.+....+++.++++.+.+.+ ...++..++++++++.|.+ +++++++++... ..+++.+..+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~-~~~~~~~~~~~~l~~~L~~-l~g~~~~~~~~~-~~~i~~~~~~~~~ 323 (387)
T PRK09331 247 KFGVKEVELLGCTLRGAPLVTLMASFPHVVERV-KRWDEEVKKARWFVDELEK-IEGFKQLGEKPR-NHDLMKFETPSFD 323 (387)
T ss_pred CCcccceeeeceecCchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhc-CCCEEEeccCcC-cCCeEEEeCCchh
Confidence 111000 01122333334555555666655443 3456667888899999999 889999863221 233443443321
Q ss_pred --------cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 362 --------EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 362 --------~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
++..+...| +||..... .....+|+.... ++++|+++++++|+++++
T Consensus 324 ~~~~~~~~~~~~~~~~L~~~gI~~~~~----------------------~~~~i~ri~~~g-~t~~di~~l~~aL~~i~~ 380 (387)
T PRK09331 324 EIAKKHKRRGFFLYEELKKRGIHGIKP----------------------GATKEFKLSTYG-LTWEQVEYVADAFKEIAE 380 (387)
T ss_pred HHhhhccccchhHHHHHHHcCceEEcc----------------------CCceEEEEEecc-CCHHHHHHHHHHHHHHHH
Confidence 123344555 35542110 112456666533 789999999999999877
Q ss_pred HH
Q 040741 432 KL 433 (457)
Q Consensus 432 ~~ 433 (457)
++
T Consensus 381 ~~ 382 (387)
T PRK09331 381 KY 382 (387)
T ss_pred hc
Confidence 64
No 29
>PLN03032 serine decarboxylase; Provisional
Probab=100.00 E-value=9.1e-33 Score=268.25 Aligned_cols=329 Identities=17% Similarity=0.176 Sum_probs=254.4
Q ss_pred CCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcE--EEeCChHHHHHH
Q 040741 56 GRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEI--IFTSGATESNNV 133 (457)
Q Consensus 56 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i--~~t~g~T~a~~~ 133 (457)
....+++++.+.-++..++++|.+++.+.+|||.+ .|.+|....+...++++++++++|++++++ +||+|||+||+.
T Consensus 22 ~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~gnP~s-~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~ 100 (374)
T PLN03032 22 KSSVHFGYPYNLDFDYGELSQLMKYSINNLGDPFI-ESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLH 100 (374)
T ss_pred hhhhccCCCchhccChHHHHHHHHhcccCCCCCcc-cCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHH
Confidence 44568888888888888999999999988999998 788898999999999999999999987765 999999999999
Q ss_pred HHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC---CceEEEEeccccccc
Q 040741 134 SIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP---DTGLISVMAVNNEIG 210 (457)
Q Consensus 134 al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~---~t~li~i~~~~~~~G 210 (457)
++.+.... .++.+|+++..+|+++.++++.+ |..++.+|++.+|.+|+++|+++|++ +|.+|+++..+|++|
T Consensus 101 al~~ar~~--~~~~~vi~s~~~H~Sv~kaa~~l---g~~~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG 175 (374)
T PLN03032 101 GILVGREV--FPDGILYASRESHYSVFKAARMY---RMEAVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKG 175 (374)
T ss_pred HHHHHHHh--CCCcEEEeCCCceeHHHHHHHHc---CCCCeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCc
Confidence 99876643 24568999999999999999888 88888999999999999999999986 478999999999999
Q ss_pred cccChHHHHHHHHhcC-----CcEEEehhhhcCCCcc-------cCCCCcccEEEeccccccC-CCCceEEEEecCCCcc
Q 040741 211 VIQPMEEIGQICKEFK-----IPFHTDAAQALGKIPV-------DVEKWNVSLMSLSGHKIYG-PKGVGALYMRRRPRIR 277 (457)
Q Consensus 211 ~~~~l~~i~~l~~~~~-----v~li~D~a~~~g~~~~-------~~~~~~~Di~~~s~~K~~g-~~G~G~l~~~~~~~~~ 277 (457)
.+.|+++|+++|+++| +++|+|+|++.+..++ ++. .++|.+++|+||++| |.|+|+++++++....
T Consensus 176 ~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~-~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~ 254 (374)
T PLN03032 176 AVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFR-KPIGSVSVSGHKFLGCPMPCGVALTRKKHVKA 254 (374)
T ss_pred cCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCC-cCCcEEEECcccccCCCcCeEEEEEEchhhHh
Confidence 9999999999999996 5899999999887764 333 268999999999877 9999999999866543
Q ss_pred cc---ccccCCccccccccCCCChhHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccce
Q 040741 278 VE---PLINGGGQERGIRSGTLPTPLIVGFGSACEIA-KKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGN 353 (457)
Q Consensus 278 ~~---~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 353 (457)
+. +++.... . .-.|+-+....+.+..+++.. .+++.++.+++-++++++.+.|.+ . ++.+..++. .
T Consensus 255 ~~~~~~Yl~~~d--~-ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~-~-~~~~~~~p~-----~ 324 (374)
T PLN03032 255 LSQNVEYLNSRD--A-TIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTE-A-GLTCRLNEL-----S 324 (374)
T ss_pred hccCCcccCCCC--C-cccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHh-C-CCcEEECCC-----c
Confidence 32 1111110 0 112333333333344444443 457999999999999999999998 4 666655432 2
Q ss_pred EEEEEccccchHHHhcccCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHH
Q 040741 354 LNLSFAYVEGESLLMGLKEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVK 428 (457)
Q Consensus 354 ~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~ 428 (457)
..+.|.....+.+. ++-.+.+ ..+.+|+++...++++.+|.+++.|++
T Consensus 325 ~~V~f~~~~~~~~~---~~w~l~~------------------------~~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 325 STVVFERPMDEAFI---KKWQLAC------------------------EGDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred eEEEEcCCCcHhHh---heeeecc------------------------cCCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 23444433222211 3322221 015899999998999999999988865
No 30
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=100.00 E-value=2.5e-32 Score=269.93 Aligned_cols=337 Identities=16% Similarity=0.190 Sum_probs=259.5
Q ss_pred EecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCC--CcEEEeCChHHHHHHHHHH
Q 040741 60 YLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASP--KEIIFTSGATESNNVSIKG 137 (457)
Q Consensus 60 ~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~--~~i~~t~g~T~a~~~al~~ 137 (457)
+|-.+++.++++.++++|.+.+ ..+ ...+.+.+.++++.+++++|+++ +.+++++|||++++.++.+
T Consensus 7 ~~~~pgP~~~~~~~~~a~~~~~-~~~----------~~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~ 75 (368)
T PRK13479 7 LLLTPGPLTTSRTVREAMLRDW-GSW----------DDDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGS 75 (368)
T ss_pred eeecCCCCCCCHHHHHHhCCCC-CCC----------ChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHh
Confidence 3557778888999998887754 211 11233689999999999999965 3588999999999999999
Q ss_pred hhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC--CceEEEEeccccccccccCh
Q 040741 138 VMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP--DTGLISVMAVNNEIGVIQPM 215 (457)
Q Consensus 138 ~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~--~t~li~i~~~~~~~G~~~~l 215 (457)
+. .+++.+++....+++.. ....++..|.+++.++.+.++.+|++++++++++ ++++|++++++|++|.+.|+
T Consensus 76 l~----~~~~~vlv~~~~~~~~~-~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~ 150 (368)
T PRK13479 76 LV----PRDGKVLVPDNGAYGAR-IAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNPL 150 (368)
T ss_pred cc----CCCCeEEEEeCCchHHH-HHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCH
Confidence 97 78888887665554432 1244456699999999987778999999999864 45789999999999999999
Q ss_pred HHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEecccc-ccCCCCceEEEEecCCCccccccccCCcc-------
Q 040741 216 EEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHK-IYGPKGVGALYMRRRPRIRVEPLINGGGQ------- 287 (457)
Q Consensus 216 ~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K-~~g~~G~G~l~~~~~~~~~~~~~~~~~~~------- 287 (457)
++|.++|+++|+++++|+++++|..++++..+++|++++|+|| ++||+|+|+++++++.++++......+..
T Consensus 151 ~~i~~l~~~~~~~livDa~~~~g~~~~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (368)
T PRK13479 151 DEIAAVAKRHGKRLIVDAMSSFGAIPIDIAELGIDALISSANKCIEGVPGFGFVIARRSELEACKGNSRSLSLDLYDQWA 230 (368)
T ss_pred HHHHHHHHHcCCEEEEEcccccCCccccccccCceEEEecCccccccCCCceEEEECHHHHHHhhcCCCCeeecHHHHHh
Confidence 9999999999999999999999988888888899999999999 67899999999998766655433211100
Q ss_pred ---ccccccCCCChhHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccc-
Q 040741 288 ---ERGIRSGTLPTPLIVGFGSACEIAKK--EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYV- 361 (457)
Q Consensus 288 ---~~~~~~~t~~~~~~~al~~al~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 361 (457)
..+....+++.+.+.++.++++.+.+ ++++..+++.++++++++.|.+ + ++.+..++....+.++.+.++..
T Consensus 231 ~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~~ 308 (368)
T PRK13479 231 YMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRA-L-GFEPLLDAEIQSPIIVTFHAPADP 308 (368)
T ss_pred hhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHH-c-CCcccCCchhcCceEEEEECCCCC
Confidence 01122237888899999999987754 3788889999999999999998 5 77766544333445566665432
Q ss_pred --cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 362 --EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 362 --~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
+..++...| +||.+.+|..+ ..+.+|+++..+++++|+++++++|++++++++
T Consensus 309 ~~~~~~l~~~L~~~gi~v~~g~~~--------------------~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~~ 365 (368)
T PRK13479 309 AYDFKEFYERLKEQGFVIYPGKLT--------------------QVDTFRIGCIGDVDAADIRRLVAAIAEALYWMG 365 (368)
T ss_pred CcCHHHHHHHHHHCCEEEecCCCC--------------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 345666666 69988765321 126899998778899999999999999987653
No 31
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=7.5e-33 Score=279.36 Aligned_cols=351 Identities=15% Similarity=0.184 Sum_probs=265.8
Q ss_pred CCCCCCCCHHHHHHHHHHHhhcc--CCCCCCccchhhhHHHHHHH-HHHHHHHHhCCCCCcEEEe---CChHHHHHHHHH
Q 040741 63 MQATTPVDPRVLDAMLPFYLSRY--GNPHSRTHLFGWESEVAVET-ARSQIADLIGASPKEIIFT---SGATESNNVSIK 136 (457)
Q Consensus 63 ~~~~~~~~~~v~~a~~~~~~~~~--~~p~~~~~~~~~~~~~~~~~-~~~~la~~~g~~~~~i~~t---~g~T~a~~~al~ 136 (457)
.++.+.++|.+++++...+.+.| |||++ .|..|....+.+++ +++.+++++|++++++.++ +|||+|+++++.
T Consensus 40 ~~sen~~s~~v~~~~~~~l~~~y~~g~p~s-~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~ 118 (452)
T PTZ00094 40 IASENFTSRAVLECLGSCFTNKYAEGLPGN-RYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYT 118 (452)
T ss_pred ecccccCCHHHHHHhcchhhccccCCCCCc-cccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHH
Confidence 34566899999999999999888 89987 56667666677774 8999999999988887777 799999999999
Q ss_pred HhhhhhcCCCCEEEEcCCCCcchHHHHHHHHh-------cCcEEEEEeCCCCCCCCHHHHHHhcCC-CceEEEEeccccc
Q 040741 137 GVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQ-------EGFEITYLPVGADGIVNLDELRAAIRP-DTGLISVMAVNNE 208 (457)
Q Consensus 137 ~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~-------~G~~v~~v~~~~~~~~d~~~le~~i~~-~t~li~i~~~~~~ 208 (457)
++. ++|++|+++..+|.++...+..++. .++++..++++.+|.+|++++++++++ +++++++. ++.
T Consensus 119 al~----~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~--~s~ 192 (452)
T PTZ00094 119 ALL----QPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAG--ASA 192 (452)
T ss_pred Hhc----CCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEe--CCC
Confidence 997 8999999999999998765432211 124555666777799999999999954 56677653 345
Q ss_pred cccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCC---CcccEEEecccc-ccCCCCceEEEEecCCCccccccccC
Q 040741 209 IGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEK---WNVSLMSLSGHK-IYGPKGVGALYMRRRPRIRVEPLING 284 (457)
Q Consensus 209 ~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~---~~~Di~~~s~~K-~~g~~G~G~l~~~~~~~~~~~~~~~~ 284 (457)
+|...|+++|.++|+++|+++++|++|++|..+.+... .++|++++|+|| ++||.| |+++++++..+.+.+....
T Consensus 193 ~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~GP~G-g~l~~~~~~~~~l~~~~~~ 271 (452)
T PTZ00094 193 YPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRGPRS-GLIFYRKKVKPDIENKINE 271 (452)
T ss_pred CCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCCCCc-eEEEEecccchHHHHhhcc
Confidence 99999999999999999999999999999988765422 268999999999 568997 8888877544333222111
Q ss_pred CccccccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccc
Q 040741 285 GGQERGIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEG 363 (457)
Q Consensus 285 ~~~~~~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (457)
... . ...|+++...++++.++++++.. +.+++.++..++++++.+.|.+ . ++.+..+........+.+...+.++
T Consensus 272 ~~~-p-~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~-~-g~~v~~~~~~~~~~~v~~~~~~~~~ 347 (452)
T PTZ00094 272 AVF-P-GLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEK-R-GYDLVTGGTDNHLVLVDLRPFGITG 347 (452)
T ss_pred ccC-C-CCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHh-C-CcEEecCCCCCceEeecCCcCCCCH
Confidence 000 0 12367888899999999999854 6788899999999999999988 4 7777653322223333444455566
Q ss_pred hHHHhcc--cCeEe-cccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCC----HHHHHHHHHHHHHHHHHHHhc
Q 040741 364 ESLLMGL--KEVAV-SSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTT----EAEVDRAIELTVKQVEKLREM 436 (457)
Q Consensus 364 ~~~~~~l--~~i~~-~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t----~edid~~~~~l~~~~~~~~~~ 436 (457)
..+...| +||.+ ..+..|.... ...+.||++++.+++ ++||+++++.|.+.++....+
T Consensus 348 ~~~~~~L~~~gI~vs~~~~p~~~~~---------------~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~~~~~ 412 (452)
T PTZ00094 348 SKMEKLLDAVNISVNKNTIPGDKSA---------------LNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKLAQEI 412 (452)
T ss_pred HHHHHHHHHCCcEEecccCCCCCcC---------------CCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHHHhhh
Confidence 7777776 58888 4555554211 123799999988776 999999999999999976665
Q ss_pred ChhH
Q 040741 437 SPLY 440 (457)
Q Consensus 437 ~~~~ 440 (457)
++.+
T Consensus 413 ~~~~ 416 (452)
T PTZ00094 413 QKQV 416 (452)
T ss_pred hhhc
Confidence 5555
No 32
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=100.00 E-value=2.7e-33 Score=274.36 Aligned_cols=335 Identities=16% Similarity=0.139 Sum_probs=246.6
Q ss_pred CCCCCCCCHHHHHHHHHHHhhccCCCCCCccchh---hhHHHHHHHHHHHHHHHhCC-CCCcEEEeCC-hHHHHHHHHHH
Q 040741 63 MQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFG---WESEVAVETARSQIADLIGA-SPKEIIFTSG-ATESNNVSIKG 137 (457)
Q Consensus 63 ~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~---~~~~~~~~~~~~~la~~~g~-~~~~i~~t~g-~T~a~~~al~~ 137 (457)
++++.+.|++|+++|.+++.... |++++.+..+ ..+.+.++++|+.+++++|+ ++++++||+| +|+|++.++.+
T Consensus 4 ~pGp~~~p~~V~~a~~~~~~~~~-~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~ 82 (355)
T cd00611 4 SAGPAALPEEVLEQAQKELLDFN-GLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLN 82 (355)
T ss_pred CCCCCCCCHHHHHHHHHHHhhcc-cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHh
Confidence 46788999999999999987644 8887777766 46668999999999999998 4567999988 99999999999
Q ss_pred hhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCC-C-HHHHHHhcCCCceEEEEeccccccccccCh
Q 040741 138 VMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIV-N-LDELRAAIRPDTGLISVMAVNNEIGVIQPM 215 (457)
Q Consensus 138 ~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~-d-~~~le~~i~~~t~li~i~~~~~~~G~~~~l 215 (457)
+... .+++++|++....|.. ...+++.|+++++++.+.++.. + .+..+..+++++++|+++|..|.+|...+
T Consensus 83 l~~~-~~~~~~i~~g~~~~~~----~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~- 156 (355)
T cd00611 83 LLGD-KGTADYVVTGAWSAKA----AKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVEFD- 156 (355)
T ss_pred cCCC-CCeEEEEECCHHHHHH----HHHHHhcCCCcEEEecccccCCCCCCCHhhcCCCCCCCEEEEeCCcccccEEcc-
Confidence 8621 1366777764444422 3445666999999998755322 4 33344556789999999999999999843
Q ss_pred HHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCCceEEEEecCCCccccccccCCc---c--ccc
Q 040741 216 EEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGG---Q--ERG 290 (457)
Q Consensus 216 ~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~---~--~~~ 290 (457)
++++.||+++++|++|++|..++++++++ +.+.|.||++||+|+|+++++++..+++.+...... . ...
T Consensus 157 ----~i~~~~g~~~~VDa~qs~g~~~idv~~~~--~~~ss~~K~lGP~G~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (355)
T cd00611 157 ----EVPDTGGVPLVADMSSNILSRPIDVSKFG--VIYAGAQKNLGPAGVTVVIVRKDLLGKARKITPSMLNYKTHADNN 230 (355)
T ss_pred ----eecccCCCeEEEEccccccCCCCCHHHhC--EEEeecccccCCCceEEEEECHHHHhhcccCCCCcccHHHHHhcC
Confidence 45566999999999999999999998755 555668999999999999999987777665422111 0 112
Q ss_pred cccCCCChhHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHhhcCCCeE-EeCCCCCcccceEEEEEccccchHHH
Q 040741 291 IRSGTLPTPLIVGFGSACEIAKK--EMDYDHKRITALHDRLLNGIKEKLDGVV-VNGSMERRYIGNLNLSFAYVEGESLL 367 (457)
Q Consensus 291 ~~~~t~~~~~~~al~~al~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (457)
...+|||+..++++.++++++.+ +++++.++.+++++++++.|++ +|++. ...++..+.+.++.|.+++. .+.
T Consensus 231 ~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~-~~gl~~~~~~~~~rs~~vvsf~~~~~---~l~ 306 (355)
T cd00611 231 SLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDN-SNGFYRGPVDKRARSRMNVPFRLGKE---ELE 306 (355)
T ss_pred CCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh-CccccccCCCHHHcCceEEEEEcCCh---hhh
Confidence 23689999999999999999876 4999999999999999999999 87852 11112233344466665543 111
Q ss_pred hcccCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Q 040741 368 MGLKEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQ 429 (457)
Q Consensus 368 ~~l~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~ 429 (457)
..+.++.++.|.. ..... + ..+.+|+|++.++|+||||+++++|+++
T Consensus 307 ~~~~~~~~r~G~~-~~~~~---------~-----~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 307 KEFLKEAEAAGMI-GLKGH---------R-----SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred HHHHHHHHHCCCc-ccCCC---------c-----ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 2211233334432 11100 0 1268999999999999999999999884
No 33
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=100.00 E-value=1.7e-32 Score=270.81 Aligned_cols=336 Identities=15% Similarity=0.100 Sum_probs=253.3
Q ss_pred CCcEEecCCCCCCCCHH-HHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeC-ChHHHHH
Q 040741 56 GRPLYLDMQATTPVDPR-VLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGAS-PKEIIFTS-GATESNN 132 (457)
Q Consensus 56 ~~~i~l~~~~~~~~~~~-v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~i~~t~-g~T~a~~ 132 (457)
....||+.+ ++.++++ |++++...+. ++.|+ +..+.+.++++++.+++++|++ +++++|++ |||++++
T Consensus 11 ~~~~~f~~G-p~~~~~~~v~~a~~~~~~---~~~hr-----~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~ 81 (378)
T PRK03080 11 PADPRFSSG-PCKKRPGWQLEALADALL---GRSHR-----QKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWE 81 (378)
T ss_pred CCCCCcCCC-CcCCChHHHHHHHHhhhc---ccCcC-----CHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHH
Confidence 335677664 5555555 9999987643 22222 3467789999999999999985 34688875 8999999
Q ss_pred HHHHHhhhhhcCC-CCEEEEcCCCCcchHHHHHHHHhcCc-EEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccc
Q 040741 133 VSIKGVMHFYKDK-KRHVITTQTEHKCVLDSCRHLQQEGF-EITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIG 210 (457)
Q Consensus 133 ~al~~~~~~~~~~-g~~vi~~~~~h~~~~~~~~~~~~~G~-~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G 210 (457)
+++.++. ++ ++.+++ ..+|.+.+.. ...+..|. +++.++.+.++.+|+++++ . +++|+++|++|.+|
T Consensus 82 ~~~~~l~----~~~~~~vi~-~g~f~~~~~~-~~~~~~g~~~v~~~~~~~g~~~d~~~i~----~-~~~V~~~h~~t~tG 150 (378)
T PRK03080 82 MALWSLL----GARRVDHLA-WESFGSKWAT-DVVKQLKLEDPRVLEADYGSLPDLSAVD----F-DRDVVFTWNGTTTG 150 (378)
T ss_pred HHHHhcC----CCCcceEEE-eCHHHHHHHH-HHHhhcCCCCceEeccCCCCCCCHhhcC----C-CCCEEEEecCCccc
Confidence 9999986 53 556665 5688776542 12244588 9999998877788888743 2 56799999999999
Q ss_pred cccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccc-cCCCCceEEEEecCCCccccccccCCc---
Q 040741 211 VIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKI-YGPKGVGALYMRRRPRIRVEPLINGGG--- 286 (457)
Q Consensus 211 ~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~-~g~~G~G~l~~~~~~~~~~~~~~~~~~--- 286 (457)
.+.|+++|++ +++|+++++|++|++|..++++.+ +|++++|+||+ +||+|+|+++++++.++++.+...++.
T Consensus 151 ~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~~--iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~~~~~~~ 226 (378)
T PRK03080 151 VRVPVARWIG--ADREGLTICDATSAAFALPLDWSK--LDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTPARPIPK 226 (378)
T ss_pred eeccchhhcc--ccCCCeEEEecccccccCCCCHHH--CcEEEEehhhhCCCCCceEEEEECHHHHHhhhcccCCCCCch
Confidence 9999999999 889999999999999999999986 79999999995 568999999999988877776543321
Q ss_pred ----------ccccc---ccCCCChhHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCC-CCCcc
Q 040741 287 ----------QERGI---RSGTLPTPLIVGFGSACEIAKK--EMDYDHKRITALHDRLLNGIKEKLDGVVVNGS-MERRY 350 (457)
Q Consensus 287 ----------~~~~~---~~~t~~~~~~~al~~al~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~ 350 (457)
....+ ..+|+++..+.++.++++++.+ +++++.++.+++++++++.|++ ++++.++.. +..+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~-~~~~~~~~~~~~~~s 305 (378)
T PRK03080 227 FFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEK-TPWATPLVADPATRS 305 (378)
T ss_pred hheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh-CCCcccccCCccccC
Confidence 11112 2346777778888999999986 5899999999999999999999 777777643 33333
Q ss_pred cceEEEEEccc---cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHH
Q 040741 351 IGNLNLSFAYV---EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIEL 425 (457)
Q Consensus 351 ~~~~~~~~~~~---~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~ 425 (457)
..++.+.++.. ...++...+ +++.+..|.++. ..+.+|++++.+++.+||++++++
T Consensus 306 ~~i~~~~~~~~~~~~~~~~~~~l~~~~i~v~~g~~~~-------------------~~~~vRis~~~~~t~~di~~l~~a 366 (378)
T PRK03080 306 NTSVTLDFVDAQAAVDAAAVAKLLRENGAVDIEPYRD-------------------APNGLRIWCGPTVEPADVEALTPW 366 (378)
T ss_pred ccEEEEEcCCchHHHHHHHHHHHHHcCCeeccccccC-------------------CCCcEEEecCCCCCHHHHHHHHHH
Confidence 45566665541 122344344 577777664321 127899999999999999999999
Q ss_pred HHHHHHHHHh
Q 040741 426 TVKQVEKLRE 435 (457)
Q Consensus 426 l~~~~~~~~~ 435 (457)
|++++++++.
T Consensus 367 l~~~~~~~~~ 376 (378)
T PRK03080 367 LDWAFERLKA 376 (378)
T ss_pred HHHHHHHHhh
Confidence 9999988774
No 34
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=100.00 E-value=6.2e-31 Score=258.80 Aligned_cols=328 Identities=17% Similarity=0.224 Sum_probs=247.2
Q ss_pred CCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCC--cEEEeCChHHHHHHHHHHhhh
Q 040741 63 MQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPK--EIIFTSGATESNNVSIKGVMH 140 (457)
Q Consensus 63 ~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~--~i~~t~g~T~a~~~al~~~~~ 140 (457)
.+++..+++.+.+++.... ..+ .....+...++++.+++++|++++ .+++++|||+++..++.++.
T Consensus 4 ~p~p~~~~~~~~~~~~~~~-~~~----------~~~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~- 71 (355)
T TIGR03301 4 TPGPLSTSATVRDAMLVDW-CHW----------DSEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV- 71 (355)
T ss_pred cCCCCCCCHHHHHHhhhhc-cCC----------CHHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc-
Confidence 3567778899999988732 111 112237899999999999999765 47899999999999999987
Q ss_pred hhcCCCCEEE-EcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC--CceEEEEeccccccccccChHH
Q 040741 141 FYKDKKRHVI-TTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP--DTGLISVMAVNNEIGVIQPMEE 217 (457)
Q Consensus 141 ~~~~~g~~vi-~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~--~t~li~i~~~~~~~G~~~~l~~ 217 (457)
.+++.++ +...+|.... ...++..|.+++.++.+.++.+|++++++++++ +.+++++++++|++|.+.|+++
T Consensus 72 ---~~~~~vi~~~~~~~~~~~--~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~ 146 (355)
T TIGR03301 72 ---PRDGKLLVLINGAYGERL--AKICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEA 146 (355)
T ss_pred ---CCCCeEEEECCCchhhHH--HHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHH
Confidence 5666655 5555555422 122344599999999887788999999999974 4567888999999999999999
Q ss_pred HHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccc-cCCCCceEEEEecCCCccccccccCCc----------
Q 040741 218 IGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKI-YGPKGVGALYMRRRPRIRVEPLINGGG---------- 286 (457)
Q Consensus 218 i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~-~g~~G~G~l~~~~~~~~~~~~~~~~~~---------- 286 (457)
|.++|++|++++++|+++++|..++++..+++|++++|++|+ +|++|+|+++++++.++++........
T Consensus 147 i~~l~~~~~~~livD~~~s~g~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (355)
T TIGR03301 147 IAKVARSHGAVLIVDAMSSFGAIPIDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGNARSLYLDLYDQWAYM 226 (355)
T ss_pred HHHHHHHcCCEEEEEeccccCCcccchhhcCccEEEecCCcccccCCceeEEEECHHHHHHhhCCCCCceeeHHHHHHHh
Confidence 999999999999999999999888888888999999999994 688899999999876655442111100
Q ss_pred cccccccCCCChhHHHHHHHHHHHHHH-h-hHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcc---c
Q 040741 287 QERGIRSGTLPTPLIVGFGSACEIAKK-E-MDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAY---V 361 (457)
Q Consensus 287 ~~~~~~~~t~~~~~~~al~~al~~~~~-~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 361 (457)
...+...++++...+.++..+++.+.+ + +++..++++++++++.+.|++ + ++.+..+++...+.++.+.++. .
T Consensus 227 ~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (355)
T TIGR03301 227 EKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRA-L-GFQPLLPERWQSPIIVSFLYPDDPDF 304 (355)
T ss_pred hhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHH-c-CCeeecCCCCCCCcEEEEECCCCCcc
Confidence 001223457888888999899987765 3 788899999999999999988 5 6766554333333344455543 2
Q ss_pred cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Q 040741 362 EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQ 429 (457)
Q Consensus 362 ~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~ 429 (457)
+..++...+ +||.+.+|..+. .++|||++..+++.+|++++++.|+++
T Consensus 305 ~~~~~~~~l~~~gi~i~~~~~~~--------------------~~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 305 DFDDFYQELKERGFVIYPGKLTL--------------------ADTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred hHHHHHHHHHHCCEEEECCcccc--------------------ccEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 334566666 688887664210 168999998889999999999999875
No 35
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=100.00 E-value=1.1e-30 Score=258.70 Aligned_cols=332 Identities=19% Similarity=0.185 Sum_probs=249.2
Q ss_pred EecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhh
Q 040741 60 YLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVM 139 (457)
Q Consensus 60 ~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~ 139 (457)
+|+. .+++..+.+.+++.+++....+++.. + ..+.+...++++++++++|+++.++++++|||+++..++.++.
T Consensus 24 ~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~ 97 (371)
T PRK13520 24 ILSS-MCTEPHPIARKAHEMFLETNLGDPGL--F---PGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAAR 97 (371)
T ss_pred eeee-eecCchHHHHHHHHHHHhcCCCCccc--C---ccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHH
Confidence 3444 35678888999999998765555432 1 1344667899999999999987779999999999999988776
Q ss_pred hhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHH
Q 040741 140 HFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIG 219 (457)
Q Consensus 140 ~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~ 219 (457)
.....++++|+++..+|.++...++.. |.+++.++.+.++.+|++++++++++++++|++.+++|++|.+.|+++|.
T Consensus 98 ~~~~~~~~~vl~~~~~h~s~~~~~~~~---g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~l~~I~ 174 (371)
T PRK13520 98 NLAKAEKPNIVVPESAHFSFDKAADML---GVELRRAPLDDDYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDPIPELS 174 (371)
T ss_pred hhccCCCceEEecCcchHHHHHHHHHc---CceEEEecCCCCCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHHHH
Confidence 321135789999999999987776555 99999999888889999999999998888888888889999999999999
Q ss_pred HHHHhcCCcEEEehhhhcCCCc-------ccCCCCcccEEEecccccc-CCCCceEEEEecC-CCcccc---ccccCCcc
Q 040741 220 QICKEFKIPFHTDAAQALGKIP-------VDVEKWNVSLMSLSGHKIY-GPKGVGALYMRRR-PRIRVE---PLINGGGQ 287 (457)
Q Consensus 220 ~l~~~~~v~li~D~a~~~g~~~-------~~~~~~~~Di~~~s~~K~~-g~~G~G~l~~~~~-~~~~~~---~~~~~~~~ 287 (457)
++|+++|+++|+|++|+.+..+ ++....++|++++|+||+. +|.|+|+++++++ ....+. +...+..
T Consensus 175 ~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~l~~~~~~~~~~~- 253 (371)
T PRK13520 175 KIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLAPIPAGGILFRDESYLDALAVDTPYLTSKK- 253 (371)
T ss_pred HHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCccCCceEEEEcCHHHHHhhcccCccccCCC-
Confidence 9999999999999999865432 2333457899999999964 4666787877554 333332 2221111
Q ss_pred ccccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHH
Q 040741 288 ERGIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESL 366 (457)
Q Consensus 288 ~~~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (457)
.....|+.+...+.++.++++.+.+ ++++..++..++++++.+.|.+ + ++.+...+ ..+++.+.++ +..++
T Consensus 254 -~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~---~~~~v~~~~~--~~~~v 325 (371)
T PRK13520 254 -QATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKE-R-GFEPVIEP---VLNIVAFDDP--NPDEV 325 (371)
T ss_pred -CcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHh-C-CCEEecCC---CceEEEEecC--CHHHH
Confidence 1122356666778888888876644 5788999999999999999998 5 77743322 2445555554 45666
Q ss_pred Hhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 367 LMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 367 ~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
...| +||.+.... ..+.+||+++.++|++||+++++.|+++++
T Consensus 326 ~~~L~~~gi~v~~~~----------------------~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 326 REKLRERGWRVSVTR----------------------CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred HHHHHHCCceeccCC----------------------CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 6666 577765321 116899999999999999999999998765
No 36
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=100.00 E-value=1.2e-30 Score=257.17 Aligned_cols=331 Identities=14% Similarity=0.177 Sum_probs=242.4
Q ss_pred CCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhc
Q 040741 64 QATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYK 143 (457)
Q Consensus 64 ~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~ 143 (457)
+...++.+++.+++.++... +++|++-.+..+....+.+.++++.+++++|+ +++++++|+|+++.+++.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~~i~~~~g~t~al~~~l~~~~---- 80 (361)
T cd06452 8 QRGGRLTPEARKALIEWGDG-YSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM--DEARVTPGAREGKFAVMHSLC---- 80 (361)
T ss_pred hcCCCCCHHHHHHHHHHhcc-cCCccccccccccccCchHHHHHHHHHHHcCC--ceEEEeCCHHHHHHHHHHHhc----
Confidence 34568999999999999843 56765534444555557899999999999998 469999999999999999987
Q ss_pred CCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCC--CCCHHHHHHhcC-------CCceEEEEeccccccccccC
Q 040741 144 DKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADG--IVNLDELRAAIR-------PDTGLISVMAVNNEIGVIQP 214 (457)
Q Consensus 144 ~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~--~~d~~~le~~i~-------~~t~li~i~~~~~~~G~~~~ 214 (457)
++|++|+++.+.|.+...+++. .|++++.++.+.++ .+|+++++++++ +++++|++++++|++|.+.|
T Consensus 81 ~~gd~Vl~~~~~~~~~~~~~~~---~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~ 157 (361)
T cd06452 81 EKGDWVVVDGLAHYTSYVAAER---AGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD 157 (361)
T ss_pred CCCCEEEEcCCcchHHHHHHHh---cCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc
Confidence 8999999999999998766544 49999999988654 899999999886 37899999999999999999
Q ss_pred hHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccC-CCCceEEEEecCCCccccccccCCcccc-ccc
Q 040741 215 MEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYG-PKGVGALYMRRRPRIRVEPLINGGGQER-GIR 292 (457)
Q Consensus 215 l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g-~~G~G~l~~~~~~~~~~~~~~~~~~~~~-~~~ 292 (457)
+++|.++|+++|+++++|+||+.|..+++...++.|++++|+||+++ +.++|+++++++..+++......++... ...
T Consensus 158 ~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~ 237 (361)
T cd06452 158 AKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKELGADFIVGSGHKSMAASAPIGVLATTEEWADIVFRTSQMFKIKEVELL 237 (361)
T ss_pred HHHHHHHHHHcCCeEEEECCcccCCcCCCHHHcCCCEEEecCCccccCCCCeEEEEECHHHHHHHhccccccccceeeee
Confidence 99999999999999999999999988887777789999999999654 5579999998876666543222111100 111
Q ss_pred cCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccc---------cc
Q 040741 293 SGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYV---------EG 363 (457)
Q Consensus 293 ~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 363 (457)
.++.....+.++.++++...+.++ ..++..++++++.+.|.+ +++++++++... ..+++.+..+.. ++
T Consensus 238 ~~~~~~~~~~~~~~al~~~~~~~~-~~~~~~~~~~~l~~~L~~-l~g~~v~~~~~~-~~n~~~~~~~~~~~~~~~~~~~~ 314 (361)
T cd06452 238 GCTLRGAPLVTLMASFPHVKERVK-RWDEEVEKARWFVAELEK-IEGIKQLGEKPK-NHDLMFFETPSFDEIAKKHKRRG 314 (361)
T ss_pred ccccCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhc-CCCeEEECCCCC-CCceEEEEcCCcchhhhhccccc
Confidence 223333445555556655544433 334445566899999999 889988753322 344444444311 12
Q ss_pred hHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHH
Q 040741 364 ESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 364 ~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~ 430 (457)
..+...| +||.... ....+.+|++... .++||++.++++|+++.
T Consensus 315 ~~~~~~L~~~gI~~~~----------------------~~~~~~~ri~~~g-~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 315 YFLYSELKKRGIHGIK----------------------PGLTRYFKLSTYG-LTWEQVEYVVDAFKEIA 360 (361)
T ss_pred hhHHHHHHHcCceEEc----------------------CCCceEEEEEecC-CCHHHHHHHHHHHHHHh
Confidence 2455555 4665310 1112588999844 58999999999998654
No 37
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=100.00 E-value=4e-31 Score=257.09 Aligned_cols=327 Identities=18% Similarity=0.156 Sum_probs=245.8
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCccchh---hhHHHHHHHHHHHHHHHhCCCC-CcEEEeCC-hHHHHHHHHHHhhhhh
Q 040741 68 PVDPRVLDAMLPFYLSRYGNPHSRTHLFG---WESEVAVETARSQIADLIGASP-KEIIFTSG-ATESNNVSIKGVMHFY 142 (457)
Q Consensus 68 ~~~~~v~~a~~~~~~~~~~~p~~~~~~~~---~~~~~~~~~~~~~la~~~g~~~-~~i~~t~g-~T~a~~~al~~~~~~~ 142 (457)
..|.+|++++.+++.... |.+.+.+..+ ..+.+.++++++.++++++.+. .+++|++| ||+|+++++.++.
T Consensus 2 ~~p~~v~~~~~~~~~~~~-~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~--- 77 (349)
T TIGR01364 2 ALPEEVLEQAQKELLNFN-GTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLL--- 77 (349)
T ss_pred CCCHHHHHHHHHHHhCcc-CCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcC---
Confidence 478899999999998655 6666666444 3445899999999999999743 35777766 9999999999998
Q ss_pred cCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC----CCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHH
Q 040741 143 KDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG----ADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEI 218 (457)
Q Consensus 143 ~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~----~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i 218 (457)
.+++++++-.....+... .+.++..|. +..+..+ ....+|+++++ +++++++|+++|..|.||+..|
T Consensus 78 -~~~~~~l~i~~G~fg~r~-~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~---- 148 (349)
T TIGR01364 78 -AEGKVADYIVTGAWSKKA-AKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR---- 148 (349)
T ss_pred -CCCCeEEEEECCHHHHHH-HHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc----
Confidence 677776654444433332 466677798 7777654 23356667665 4568899999999999999887
Q ss_pred HHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCCceEEEEecCCCccccccccCCc-----ccccccc
Q 040741 219 GQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGG-----QERGIRS 293 (457)
Q Consensus 219 ~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~-----~~~~~~~ 293 (457)
++++.+++++++|+++++|..++++++ .|++++|+||++||+|+|++++++++.+++.+...... ......+
T Consensus 149 -~l~~~~~~l~iVDavss~g~~~id~~~--~d~~~~ssqK~lgP~Glg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (349)
T TIGR01364 149 -ELPDVKNAPLVADMSSNILSRPIDVSK--FGLIYAGAQKNIGPAGLTVVIVRKDLLGRASRITPSMLNYKIHAENDSMY 225 (349)
T ss_pred -eecccCCCeEEEEccccccCccCCHHH--ccEEEEecccccCCCceEEEEECHHHHhhcccCCCCcchHHHHHhcCCCC
Confidence 677788999999999999999999987 45999999998899999999999988877665432211 0113345
Q ss_pred CCCChhHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCC-CCCcccceEEEEEcccc-chHHHhc
Q 040741 294 GTLPTPLIVGFGSACEIAKK--EMDYDHKRITALHDRLLNGIKEKLDGVVVNGS-MERRYIGNLNLSFAYVE-GESLLMG 369 (457)
Q Consensus 294 ~t~~~~~~~al~~al~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~ 369 (457)
+||++..++++.++++++.+ +++++.++.+++++++++.|++ ++++..... +..+.+.++.|.+++.. ..++...
T Consensus 226 ~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~-~~gl~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~ 304 (349)
T TIGR01364 226 NTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDN-SNGFYRNPVDPRNRSRMNVVFTLGNEELEKRFLKE 304 (349)
T ss_pred CCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh-CCCeeccCCCHHHcCCeEEEEecCChhHhHHHHHH
Confidence 89999999999999999876 4999999999999999999999 878655532 23344455666655331 1233233
Q ss_pred c--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 370 L--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 370 l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
+ +|+++..|.. ..+.+|+|+..++|.||||+++++|+++.++
T Consensus 305 ~~~~Gi~~~~~~~---------------------~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 305 AEERGLVSLKGHR---------------------SVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred HHHCCCcccCCcc---------------------ccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 3 4554433321 1268999999999999999999999987653
No 38
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=100.00 E-value=4.6e-31 Score=257.98 Aligned_cols=339 Identities=16% Similarity=0.127 Sum_probs=248.1
Q ss_pred EEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccc---hhhhHHHHHHHHHHHHHHHhCCCC-CcE-EEeCChHHHHHH
Q 040741 59 LYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHL---FGWESEVAVETARSQIADLIGASP-KEI-IFTSGATESNNV 133 (457)
Q Consensus 59 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~---~~~~~~~~~~~~~~~la~~~g~~~-~~i-~~t~g~T~a~~~ 133 (457)
.+|-++|++.+|++|+++|...+.... +.+.+.+. ....+.+.+.++++.+++++|.+. .++ +++++||.+++.
T Consensus 4 ~~l~~pGP~~~p~~V~~a~~~~~~~~~-~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea 82 (360)
T PRK05355 4 VYNFSAGPAMLPEEVLEQAQQELLDWN-GSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAM 82 (360)
T ss_pred eeeccCCCCCCCHHHHHHHHHHhhccc-cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHH
Confidence 467788999999999999999875432 32322332 234455899999999999999732 345 555779999999
Q ss_pred HHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC-CCCCCHHHHHH-hcCCCceEEEEecccccccc
Q 040741 134 SIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA-DGIVNLDELRA-AIRPDTGLISVMAVNNEIGV 211 (457)
Q Consensus 134 al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~-~~~~d~~~le~-~i~~~t~li~i~~~~~~~G~ 211 (457)
++.++. .+++++++-.....+.. ..+.++..|.. ..+..+. .+..+..++++ ++++++++|+++|..|.||+
T Consensus 83 ~~~nl~----~~g~~~l~i~~G~fg~r-~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTstGv 156 (360)
T PRK05355 83 VPMNLL----GGGKKADYVDTGSWSKK-AIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETIDGT 156 (360)
T ss_pred HHHhcC----CCCCeEEEEECCHHHHH-HHHHHHHhCCc-eEEecccccCCCCCCChhhccCCCCCCEEEEccCCCcceE
Confidence 999998 67766654333322222 24556666865 6666553 56666666666 78888999999999999999
Q ss_pred cc-ChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCCceEEEEecCCCccccccccCC-----
Q 040741 212 IQ-PMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGG----- 285 (457)
Q Consensus 212 ~~-~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~----- 285 (457)
.. |+++| +|+++++|+++++|..+++++++ |++++|+||++||+|+|++++++++.+++.+...++
T Consensus 157 ~~~~i~~i------~g~l~vVDavss~g~~~idv~~~--d~~~~ssqK~lgP~Glg~l~~s~~~l~~~~~~~~~~~~~~~ 228 (360)
T PRK05355 157 EFHELPDT------GDVPLVADMSSDILSRPIDVSKF--GLIYAGAQKNIGPAGLTIVIVREDLLGRALPSIPSMLDYKT 228 (360)
T ss_pred ecCccccc------CCCcEEEEcCccccCccCCHHHc--cEEEEeccccccCCceEEEEECHHHHhhcccCCChHHHHHH
Confidence 98 77766 89999999999999999999875 699999999889999999999999887776632111
Q ss_pred ccccccccCCCChhHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccc-c
Q 040741 286 GQERGIRSGTLPTPLIVGFGSACEIAKK--EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYV-E 362 (457)
Q Consensus 286 ~~~~~~~~~t~~~~~~~al~~al~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 362 (457)
........+|||...++++.++++++.+ +++++.++.+++++++++.|++ ++.+..+.++..+.+.++.|.++.. .
T Consensus 229 ~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~-~~~~~~~~~~~~rs~~v~sf~~~~~~~ 307 (360)
T PRK05355 229 HADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDS-SDFYRNPVAPEDRSRMNVPFTLADEEL 307 (360)
T ss_pred HHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHh-CCCcccCCChhhcCCcEEEEEcCChHH
Confidence 0122345689999999999999999876 4999999999999999999999 7643333333334445566665542 1
Q ss_pred chHHHhcccCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 363 GESLLMGLKEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 363 ~~~~~~~l~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
..++.. +..+.|..|.... . ..+.+|+|+..++|.||||+++++|+++++.
T Consensus 308 ~~~~~~----~~~~~Gi~~~~~~------------~---~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 308 DKKFLA----EAKAAGLVGLKGH------------R---SVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred HHHHHH----HHHHCCCcccCCC------------C---ccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 122222 3334444442210 0 1278999999999999999999999998764
No 39
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.6e-30 Score=256.41 Aligned_cols=342 Identities=15% Similarity=0.149 Sum_probs=245.7
Q ss_pred cccccCCCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChH
Q 040741 50 KGVRIAGRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGAT 128 (457)
Q Consensus 50 ~~~~~~~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T 128 (457)
..+...++.|.|+.+.+. ++++++.+++.+.+.....+ .|.......++++++++++|++++++++|+|+|
T Consensus 22 ~~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~--------~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t 93 (380)
T PRK06225 22 DYVFKDKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYC--------KYPPPEGFPELRELILKDLGLDDDEALITAGAT 93 (380)
T ss_pred HHHhhcCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCC--------CCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHH
Confidence 334455778889876665 67899999999988642111 111123578899999999999988999999999
Q ss_pred HHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC---CCCCCHHHHHHhcCCCceEEEEecc
Q 040741 129 ESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA---DGIVNLDELRAAIRPDTGLISVMAV 205 (457)
Q Consensus 129 ~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~---~~~~d~~~le~~i~~~t~li~i~~~ 205 (457)
+|+.+++.+++ .+|+.|++.++.|......++.. |.+++.++.+. ++.+|++++++++++++++++++++
T Consensus 94 ~al~~~~~~~~----~~gd~vl~~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p 166 (380)
T PRK06225 94 ESLYLVMRAFL----SPGDNAVTPDPGYLIIDNFASRF---GAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDP 166 (380)
T ss_pred HHHHHHHHHhc----CCCCEEEEcCCCCcchHHHHHHh---CceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCC
Confidence 99999999987 78999999999998776665555 99999998742 3579999999999999999999999
Q ss_pred ccccccccC---hHHHHHHHHhcCCcEEEehhhhc---CCCcccCCCCcccEEEeccccccCCCC--ceEEEEecCCCcc
Q 040741 206 NNEIGVIQP---MEEIGQICKEFKIPFHTDAAQAL---GKIPVDVEKWNVSLMSLSGHKIYGPKG--VGALYMRRRPRIR 277 (457)
Q Consensus 206 ~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~---g~~~~~~~~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~ 277 (457)
+||+|.+.+ +++|.++|+++|+++|+|+++.- +............+++.|++|.+|++| +|+++++++.+++
T Consensus 167 ~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~l~~~ 246 (380)
T PRK06225 167 LNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVATPDLIEV 246 (380)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCCEEEEeechhhcCCccceeEEEecCHHHHHH
Confidence 999999877 88899999999999999999852 221111111234677889999888777 7999998876666
Q ss_pred ccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEE
Q 040741 278 VEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLS 357 (457)
Q Consensus 278 ~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 357 (457)
+.+...+ ....+.....++..++....+.+++..+..+++.+.+.+.|++ ++++.+...+. ..+++.+.
T Consensus 247 ~~~~~~~--------~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~--~g~~~~~~ 315 (380)
T PRK06225 247 VKSIVIN--------DLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDE-IEGVFLPVYPS--HGNMMVID 315 (380)
T ss_pred HHHHHhc--------ccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CcCCccccCCC--CCeEEEEE
Confidence 5543211 1123444444444444332333556666677778888888888 66654321111 13444555
Q ss_pred Ec--cccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 358 FA--YVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 358 ~~--~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
++ ..+..++...| +||.+.+|..|.. ..+.+++|++++. ++|++++++++|+++++.+
T Consensus 316 ~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~----------------~~~~~~iR~s~~~--~~e~l~~~~~~l~~~~~~~ 377 (380)
T PRK06225 316 ISEAGIDPEDLVEYLLERKIFVRQGTYTSK----------------RFGDRYIRVSFSI--PREQVEVFCEEFPDVVETL 377 (380)
T ss_pred cccccCCHHHHHHHHHHCCEEEcCCcccCc----------------CCCCceEEEEeCC--CHHHHHHHHHHHHHHHHHh
Confidence 53 24566777666 6899998865532 1123799999975 6899999999999999988
Q ss_pred Hh
Q 040741 434 RE 435 (457)
Q Consensus 434 ~~ 435 (457)
|.
T Consensus 378 ~~ 379 (380)
T PRK06225 378 RT 379 (380)
T ss_pred hc
Confidence 74
No 40
>PLN02483 serine palmitoyltransferase
Probab=99.98 E-value=1.4e-30 Score=264.02 Aligned_cols=349 Identities=16% Similarity=0.206 Sum_probs=252.1
Q ss_pred CCCCcccccceecccccCCCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCC
Q 040741 38 YEPQEDQNGITLKGVRIAGRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGA 116 (457)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~ 116 (457)
|+++++..+...+.+.+-..+.||+++.+. .+++.+.+++.++..... ..+..++..+.+.++|+.+|+++|.
T Consensus 88 ~~~~~~~~~~~~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~------~sr~~~g~~~~~~ele~~lA~~~g~ 161 (489)
T PLN02483 88 DNNKTLKRTTKTRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTC------SSRVDGGTTKLHRELEELVARFVGK 161 (489)
T ss_pred CCCceEEecCCCceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCC------ccccccCCcHHHHHHHHHHHHHhCC
Confidence 567777677777888899999999998765 577888988888643211 1122233447899999999999996
Q ss_pred CCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcC--
Q 040741 117 SPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIR-- 194 (457)
Q Consensus 117 ~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~-- 194 (457)
+ +.++|++ |+.++..++.+++ ++||+|++++++|++....++.. |++++.++.+ |++++++.++
T Consensus 162 ~-~ai~~~~-G~~an~~~i~al~----~~Gd~Vi~d~~~h~s~~~~~~~~---Ga~v~~~~~~-----d~~~le~~l~~~ 227 (489)
T PLN02483 162 P-AAIVFGM-GYATNSTIIPALI----GKGGLIISDSLNHNSIVNGARGS---GATIRVFQHN-----TPSHLEEVLREQ 227 (489)
T ss_pred C-cEEEECC-HHHHHHHHHHHhC----CCCCEEEEcchhhHHHHHHHHHc---CCeEEEEeCC-----CHHHHHHHHHhh
Confidence 4 4466655 6667777788887 89999999999999999887665 9999999865 5666665543
Q ss_pred -----CCc------eEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCc---------ccCCCCcccEEEe
Q 040741 195 -----PDT------GLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIP---------VDVEKWNVSLMSL 254 (457)
Q Consensus 195 -----~~t------~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~---------~~~~~~~~Di~~~ 254 (457)
+++ .+|+++++.++.|.+.++++|.++|++||+++++|++|+.|... .++...+.|+++.
T Consensus 228 i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~ 307 (489)
T PLN02483 228 IAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMG 307 (489)
T ss_pred hhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEE
Confidence 222 37778888899999999999999999999999999999865431 2233346799999
Q ss_pred ccccccCCCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHH-----hhHHHHHHHHHHHHHH
Q 040741 255 SGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKK-----EMDYDHKRITALHDRL 329 (457)
Q Consensus 255 s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~-----~~~~~~~~~~~~~~~l 329 (457)
|++|.+|+.| |+++++++.++.+.....+. ...++.+++.++++.++++.+.. ...+..++++++++++
T Consensus 308 SfSKs~g~~G-G~i~~~~~li~~l~~~~~~~-----~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l 381 (489)
T PLN02483 308 TFTKSFGSCG-GYIAGSKELIQYLKRTCPAH-----LYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFF 381 (489)
T ss_pred ecchhcccCc-eEEEcCHHHHHHHHHhCccc-----cccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHH
Confidence 9999999887 99998887766665433221 11234555666667777876652 1345678899999999
Q ss_pred HHHHhhcCCCeEEeCCCCCcccceEEEEEc-cccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeE
Q 040741 330 LNGIKEKLDGVVVNGSMERRYIGNLNLSFA-YVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSI 406 (457)
Q Consensus 330 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~i 406 (457)
++.|++ + ++.+.++... +.+.+.+. .....++...| +||.+.+..++.. ....+.+
T Consensus 382 ~~~L~~-~-G~~v~~~~~s---p~~~l~l~~~~~~~~~~~~Ll~~GI~v~~~~fp~~----------------p~~~~~v 440 (489)
T PLN02483 382 RSELQK-M-GFEVLGDNDS---PVMPIMLYNPAKIPAFSRECLKQNVAVVVVGFPAT----------------PLLLARA 440 (489)
T ss_pred HHHHHH-C-CCcccCCCCC---CEEEEEECCHHHHHHHHHHHHHCCcEEeeeCCCCC----------------CCCCceE
Confidence 999999 5 7776654332 22223222 12233454444 6888875333221 1123689
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 407 RFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 407 Ri~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
||+++..+++|||++++++|+++++.+
T Consensus 441 Ri~isa~~t~edId~~l~~L~~~~~~~ 467 (489)
T PLN02483 441 RICISASHSREDLIKALEVISEVGDLV 467 (489)
T ss_pred EEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998765
No 41
>PRK07179 hypothetical protein; Provisional
Probab=99.98 E-value=2.2e-30 Score=259.09 Aligned_cols=317 Identities=20% Similarity=0.249 Sum_probs=235.7
Q ss_pred CCHHHHHHHHHHHhhccCCCCC-CccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCC
Q 040741 69 VDPRVLDAMLPFYLSRYGNPHS-RTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKR 147 (457)
Q Consensus 69 ~~~~v~~a~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~ 147 (457)
..|++++++.+.+.+...+++. +.+..+ .+...++++.+++++|.+. +++++||++|++++++++. .+++
T Consensus 69 ~~p~v~~a~~~~~~~~~~~~~~s~~~~~~---~~~~~~le~~la~~~g~~~--~~~~~sG~~An~~~l~~l~----~~g~ 139 (407)
T PRK07179 69 GHPDIIKAQIAALQEEGDSLVMSAVFLHD---DSPKPQFEKKLAAFTGFES--CLLCQSGWAANVGLLQTIA----DPNT 139 (407)
T ss_pred CCHHHHHHHHHHHHHhCCCCCccccccCC---chHHHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHhC----CCCC
Confidence 4689999999999876555542 223222 2467788999999999864 7899999999999999998 7899
Q ss_pred EEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC-CceEEEEeccccccccccChHHHHHHHHhcC
Q 040741 148 HVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP-DTGLISVMAVNNEIGVIQPMEEIGQICKEFK 226 (457)
Q Consensus 148 ~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~-~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~ 226 (457)
+|+++...|.+....++.. |.++..++. .|++++++++++ ++++|++++++|++|.+.|+++|.++|++||
T Consensus 140 ~v~~~~~~h~s~~~~~~~~---g~~~~~~~~-----~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~ 211 (407)
T PRK07179 140 PVYIDFFAHMSLWEGVRAA---GAQAHPFRH-----NDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIVDIAEEFG 211 (407)
T ss_pred EEEEECCcCHHHHHHHHHC---CCeEEEecC-----CCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHHHHHHHHcC
Confidence 9999999999998877655 887766543 489999999976 5889999999999999999999999999999
Q ss_pred CcEEEehhhhcCCCcc---------cCCCCcccEEEeccccccCCCCceEEEEecCCCccccccccCCccccccccCCCC
Q 040741 227 IPFHTDAAQALGKIPV---------DVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLP 297 (457)
Q Consensus 227 v~li~D~a~~~g~~~~---------~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 297 (457)
+++|+|++|++|.... ++. .++|++++|++|.+|++ +|+++++++..+.+...... ....++.+
T Consensus 212 ~~livDea~~~g~~g~~g~g~~~~~~~~-~~vdi~~~S~sK~~g~~-~G~l~~~~~~~~~~~~~~~~-----~~~~~t~~ 284 (407)
T PRK07179 212 CVLVVDESHSLGTHGPQGAGLVAELGLT-SRVHFITASLAKAFAGR-AGIITCPRELAEYVPFVSYP-----AIFSSTLL 284 (407)
T ss_pred CEEEEECcccccCcCCCCCchHHhcCCC-CCCCEEEeechHhhhcc-CeEEEeCHHHHHHHHHhCcC-----eeeCCCCC
Confidence 9999999998765321 111 24699999999988876 79999887654443211110 12345667
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccc-cchHHHhcc--cCeE
Q 040741 298 TPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYV-EGESLLMGL--KEVA 374 (457)
Q Consensus 298 ~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l--~~i~ 374 (457)
+..++++.++++.... .....++++++++++++.|.+ + ++.+.+. ..++.+.+... ....+...| +||.
T Consensus 285 ~~~~aa~~aal~~~~~-~~~~~~~l~~~~~~l~~~L~~-~-g~~v~~~-----~~i~~l~~~~~~~~~~~~~~L~~~GI~ 356 (407)
T PRK07179 285 PHEIAGLEATLEVIES-ADDRRARLHANARFLREGLSE-L-GYNIRSE-----SQIIALETGSERNTEVLRDALEERNVF 356 (407)
T ss_pred HHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHH-c-CCCCCCC-----CCEEEEEeCCHHHHHHHHHHHHHCCce
Confidence 7777777777777643 466788999999999999998 5 6665532 34555554321 234455555 5765
Q ss_pred ecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 375 VSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 375 ~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
+. .+|.+.. ....+.|||+++..+|++||++++++|++++++.
T Consensus 357 ~~--~~~~p~~--------------~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 357 GA--VFCAPAT--------------PKNRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred Ee--eecCCCC--------------CCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 32 3343310 1123799999999999999999999999988764
No 42
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.98 E-value=1.5e-29 Score=249.65 Aligned_cols=338 Identities=14% Similarity=0.164 Sum_probs=236.5
Q ss_pred CcEEecC-CCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHH
Q 040741 57 RPLYLDM-QATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSI 135 (457)
Q Consensus 57 ~~i~l~~-~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al 135 (457)
+.|.|+. +..+.+.+.+.+++.++.....+...- .......+.+...++++.+|+++|+++ +++++|+++++..++
T Consensus 7 ~~~~~~~~~~~g~~~~~~~~a~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~e~lA~~~g~~~--~~i~~g~~~a~~~~~ 83 (370)
T TIGR02539 7 GSINLNPLQRGGVLTEAARKALVEFGDGYSVCDFC-GGRLDQITKPPIHDFLEDLAEFLGMDE--ARVTHGAREGKFAVM 83 (370)
T ss_pred cccccChhhhCCCCcHHHHHHHHHHhhcccccccc-ccccccccchHHHHHHHHHHHHhCCCc--eEEECChHHHHHHHH
Confidence 3445542 345588899999999987632211110 111111223567788889999999975 777899999999999
Q ss_pred HHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC--CCCCCCHHHHHHhcCC-------CceEEEEeccc
Q 040741 136 KGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG--ADGIVNLDELRAAIRP-------DTGLISVMAVN 206 (457)
Q Consensus 136 ~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~le~~i~~-------~t~li~i~~~~ 206 (457)
.++. ++|+.|+++...|.+.+.+++. .|++++.++.+ .++.+|++++++++++ ++++|++++++
T Consensus 84 ~~l~----~~gd~Vl~~~~~h~s~~~~~~~---~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~ 156 (370)
T TIGR02539 84 HALC----KEGDWVVLDGLAHYTSYVAAER---AGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVD 156 (370)
T ss_pred HHhh----CCCCEEEECCcccHHHHHHHHH---cCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCC
Confidence 9998 8999999999999998876544 49999999986 3477899999999863 67899999999
Q ss_pred cccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCC-CCceEEEEecCCCccccccccCC
Q 040741 207 NEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGP-KGVGALYMRRRPRIRVEPLINGG 285 (457)
Q Consensus 207 ~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~-~G~G~l~~~~~~~~~~~~~~~~~ 285 (457)
|++|.+.|+++|.++|+++|+++++|++|+.|..+.+...+++|+++.|+||++|+ .++|+++++++.++++......+
T Consensus 157 ~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~~~ 236 (370)
T TIGR02539 157 GEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKEIGADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSRYS 236 (370)
T ss_pred CCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhhcccccCC
Confidence 99999999999999999999999999999998766666566789999999997764 34899999988777765544322
Q ss_pred ccccc-cccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccc---
Q 040741 286 GQERG-IRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYV--- 361 (457)
Q Consensus 286 ~~~~~-~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 361 (457)
..... ...++.......++.+++....+.+++.. +..++++++++.|++ + ++.+++... ...+++.+.++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~l~~~~-~~~~~~~~l~~~L~~-~-g~~~~~~~~-s~t~~v~~~~~~~~~~ 312 (370)
T TIGR02539 237 PVKEVELLGCTSRGAPIVTMMASFPHVVERVKRWD-EEVKKTRWFVAELED-I-GFIQLGQKP-KEHDLVKFETPGFHEI 312 (370)
T ss_pred ccceeeeecccccccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHh-C-CcEEEccCC-CcCceEEEECCchhHH
Confidence 11110 11123333344444455554444444333 334446789999999 4 677653211 2255555555432
Q ss_pred ------cchHHHhcc--cCeE-ecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 362 ------EGESLLMGL--KEVA-VSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 362 ------~~~~~~~~l--~~i~-~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
....+...| +||. +++| ..++||+++. ..+++|+++++++|++++++
T Consensus 313 ~~~~~~~~~~~~~~L~e~GI~~ir~~-----------------------~~~~iRis~~-~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 313 AQKHKRRGYFLYEELKKRGIHGIRSG-----------------------QTKYFKLSVY-GLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred hhhhccccHHHHHHHHhCCCccccCC-----------------------cceEEEEEec-CCCHHHHHHHHHHHHHHHHh
Confidence 122455555 4664 3221 0268999984 46899999999999988764
No 43
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.98 E-value=1.6e-29 Score=248.81 Aligned_cols=338 Identities=18% Similarity=0.187 Sum_probs=252.2
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhC--CCCCc-EEEeCChHHHH
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIG--ASPKE-IIFTSGATESN 131 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g--~~~~~-i~~t~g~T~a~ 131 (457)
.+.|.|..+.+. +.|+.+.+++.+.+.... . ..++. .+..+..+.+.+.+.+..| .++++ ++.|+|+++|+
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~-~--~Y~~~--~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al 102 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAIEALEEGG-T--HYTPS--AGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEAL 102 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhccc-C--CCCCC--CCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHH
Confidence 457899888887 778889999999886521 0 01111 1222344444444455545 34555 99999999999
Q ss_pred HHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC---CCCCCCHHHHHHhcCCCceEEEEeccccc
Q 040741 132 NVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG---ADGIVNLDELRAAIRPDTGLISVMAVNNE 208 (457)
Q Consensus 132 ~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~---~~~~~d~~~le~~i~~~t~li~i~~~~~~ 208 (457)
.+++.++. ++||+||++.+.|+++......+ |.+++.++++ .++.+|+++|+++++++|++|+++.||||
T Consensus 103 ~~~~~a~~----~pGDeVlip~P~Y~~y~~~~~~~---gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NP 175 (393)
T COG0436 103 FLAFLALL----NPGDEVLIPDPGYPSYEAAVKLA---GGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNP 175 (393)
T ss_pred HHHHHHhc----CCCCEEEEeCCCCcCHHHHHHhc---CCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCC
Confidence 99999999 99999999999999999998888 9999999975 37899999999999999999999999999
Q ss_pred cccccC---hHHHHHHHHhcCCcEEEehhhhcC---C-Cccc---CCC-CcccEEEeccccccCCCC--ceEEEEe-cCC
Q 040741 209 IGVIQP---MEEIGQICKEFKIPFHTDAAQALG---K-IPVD---VEK-WNVSLMSLSGHKIYGPKG--VGALYMR-RRP 274 (457)
Q Consensus 209 ~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g---~-~~~~---~~~-~~~Di~~~s~~K~~g~~G--~G~l~~~-~~~ 274 (457)
||.+++ +++|+++|++||++|+.|++|.-- . .... ... ...-+.+.|+||.|+..| +||++++ +.+
T Consensus 176 TGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l 255 (393)
T COG0436 176 TGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEEL 255 (393)
T ss_pred cCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChHHH
Confidence 999988 788999999999999999999631 1 1111 111 134567779999888666 9999998 544
Q ss_pred CccccccccCCccccccccCCCChhHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccc
Q 040741 275 RIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAK--KEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIG 352 (457)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 352 (457)
++.+..... ....+++.+...++..|++.-. ..++...+.++++++.+.+.|.+ ++++.+..+++. ..
T Consensus 256 ~~~~~~~~~-------~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~-~~g~~~~~~p~G--a~ 325 (393)
T COG0436 256 IAALRKLKS-------YLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNE-IGGLSVVKPPEG--AF 325 (393)
T ss_pred HHHHHHHHH-------hcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHh-cCCeeeccCCCe--eE
Confidence 444442221 1122566666777777887652 35677778999999999999999 888988875443 33
Q ss_pred eEEEEEcc-ccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHH
Q 040741 353 NLNLSFAY-VEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVK 428 (457)
Q Consensus 353 ~~~~~~~~-~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~ 428 (457)
+++..++. .++.++...| .||++.+|..+.. . .++++|||++.. +.++++++++++.+
T Consensus 326 Y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~--------------~--~g~~~vRis~~~--~~~~l~~a~~rl~~ 387 (393)
T COG0436 326 YLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGE--------------P--PGEGYVRLSLAT--SEETLEEALRRLAR 387 (393)
T ss_pred EEEeecCCCCCHHHHHHHHHHhCCEEEecccccCC--------------C--CCCCeEEEEEec--CHHHHHHHHHHHHH
Confidence 33444443 4667787777 5899999975432 1 345899999986 45999999999999
Q ss_pred HHHHH
Q 040741 429 QVEKL 433 (457)
Q Consensus 429 ~~~~~ 433 (457)
+++..
T Consensus 388 ~~~~~ 392 (393)
T COG0436 388 FLAEY 392 (393)
T ss_pred HHHhc
Confidence 88754
No 44
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.97 E-value=6.1e-30 Score=252.51 Aligned_cols=324 Identities=18% Similarity=0.199 Sum_probs=231.3
Q ss_pred CcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhh----HHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHH
Q 040741 57 RPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWE----SEVAVETARSQIADLIGASPKEIIFTSGATESNN 132 (457)
Q Consensus 57 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~----~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~ 132 (457)
..-|||++.++++.+++.+++.++.... |+++.+..|.. ..+.++++|+.+++++|++. .++|++ |+.++.
T Consensus 11 s~~YL~~~~~~~~~~~~~~~~~~~~~~~---p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~-~l~~~s-G~~a~~ 85 (370)
T PRK05937 11 TNDFLGFSRSDTLVHEVEKRYRLYCRQF---PHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE-AFIVPS-GYMANL 85 (370)
T ss_pred CCCccCCCCCHHHHHHHHHHHHHhcccc---CCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe-EEEECC-hHHHHH
Confidence 3359999998888899999988886543 54445555555 66899999999999999964 355555 556665
Q ss_pred HHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcC------CCceEEEEeccc
Q 040741 133 VSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIR------PDTGLISVMAVN 206 (457)
Q Consensus 133 ~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~------~~t~li~i~~~~ 206 (457)
.++..+. ++++.|+++..+|.++..+++.+. |..+. ++ ..|+++++++++ +.+.+|++++++
T Consensus 86 ~~~~~~~----~~~d~ii~d~~~H~sv~~~~~~~~--~~~~~-~~-----~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~ 153 (370)
T PRK05937 86 GLCAHLS----SVTDYVLWDEQVHISVVYSLSVIS--GWHQS-FR-----HNDLDHLESLLESCRQRSFGRIFIFVCSVY 153 (370)
T ss_pred HHHHHhC----CCCCEEEEEhhhhHHHHHHHHHcC--CceEE-ec-----CCCHHHHHHHHHhhhccCCCcEEEEEecCC
Confidence 4444433 678999999999999999987652 43333 33 358999999886 346788899999
Q ss_pred cccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCC----CC---cccEEEeccccccCCCCceEEEEecCCCcccc
Q 040741 207 NEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVE----KW---NVSLMSLSGHKIYGPKGVGALYMRRRPRIRVE 279 (457)
Q Consensus 207 ~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~----~~---~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~ 279 (457)
|++|.+.|+++|.++|+++|+++++|++|+.|..+.+.. .+ +.++++.|++|.+|+.|.|+++.+ +....+.
T Consensus 154 s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G~~vl~~~-~~~~~~~ 232 (370)
T PRK05937 154 SFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMGAALLSSS-EVKQDLM 232 (370)
T ss_pred CCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCceEEEcCH-HHHHHHH
Confidence 999999999999999999999999999999987766542 22 234677889999999987776653 3222222
Q ss_pred ccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEc
Q 040741 280 PLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFA 359 (457)
Q Consensus 280 ~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (457)
...... ...++.+++.++++.++++++.+..+...++.+++.+++.+.|.. .. + .....+.++
T Consensus 233 ~~~~~~-----~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~-~~-------~----~~~~~i~~~ 295 (370)
T PRK05937 233 LNSPPL-----RYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSS-AA-------P----GCVQPIFLP 295 (370)
T ss_pred HhCCCC-----eecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCC-CC-------C----CCEEEEEeC
Confidence 111100 122346667788888899888765466778888888888887754 21 0 011224455
Q ss_pred cccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHh
Q 040741 360 YVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLRE 435 (457)
Q Consensus 360 ~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~ 435 (457)
+.....+...| +||.+. .+|.+ ..+.|||+++.++|+||||+++++|++.+++++.
T Consensus 296 ~~~~~~~~~~L~~~gi~v~--~~~~~------------------~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~~ 353 (370)
T PRK05937 296 GISEQELYSKLVETGIRVG--VVCFP------------------TGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQK 353 (370)
T ss_pred ChhHHHHHHHHHHCCeeEE--eeCCC------------------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCC
Confidence 45556666666 577664 33432 1268999999999999999999999999887654
No 45
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.97 E-value=3.2e-29 Score=250.00 Aligned_cols=329 Identities=17% Similarity=0.209 Sum_probs=237.8
Q ss_pred EecCCCCC----CCCHHHHHHHHHHHhhc-cCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHH
Q 040741 60 YLDMQATT----PVDPRVLDAMLPFYLSR-YGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVS 134 (457)
Q Consensus 60 ~l~~~~~~----~~~~~v~~a~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~a 134 (457)
++++.++. ..+|++.+++.+.+.+. .+++.++ +..|. .+.+.++|+.+++++|.+ ++++++||++|++.+
T Consensus 40 ~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~-~~~G~--~~~~~~le~~ia~~~g~~--~~ii~~~~~~a~~~~ 114 (393)
T TIGR01822 40 VLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVR-FICGT--QDIHKELEAKIAAFLGTE--DTILYASCFDANGGL 114 (393)
T ss_pred EEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcC-cccCC--hHHHHHHHHHHHHHhCCC--cEEEECchHHHHHHH
Confidence 44444444 35789999999998763 5555552 33343 467899999999999985 377778999999999
Q ss_pred HHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC------CceEEEEeccccc
Q 040741 135 IKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP------DTGLISVMAVNNE 208 (457)
Q Consensus 135 l~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~------~t~li~i~~~~~~ 208 (457)
+.++. ++||+|+++.++|+++...++.+ +.+...++ .+|++++++++++ ++++|++++++|+
T Consensus 115 ~~~l~----~~gd~vi~~~~~~~s~~~~~~~~---~~~~~~~~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~ 182 (393)
T TIGR01822 115 FETLL----GAEDAIISDALNHASIIDGVRLC---KAKRYRYA-----NNDMADLEAQLKEARAAGARHRLIATDGVFSM 182 (393)
T ss_pred HHHhC----CCCCEEEEeccccHHHHHHHHhc---CCceEEeC-----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccC
Confidence 88887 89999999999999999887665 55554333 3689999998874 7889999999999
Q ss_pred cccccChHHHHHHHHhcCCcEEEehhhhcCCCcc---------cCCCCcccEEEeccccccCCCCceEEEEecCCCcccc
Q 040741 209 IGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPV---------DVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVE 279 (457)
Q Consensus 209 ~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~---------~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~ 279 (457)
+|.+.|+++|+++|++||+++++|++|+.|.... +.. .++|++++|+||++++..+|+++++++..+.+.
T Consensus 183 tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~di~~~s~sK~l~g~r~G~~~~~~~~~~~l~ 261 (393)
T TIGR01822 183 DGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVM-GRVDIITGTLGKALGGASGGFTTARKEVVELLR 261 (393)
T ss_pred CCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCC-CCCeEEEEEChHHhhCCCcEEEEeCHHHHHHHH
Confidence 9999999999999999999999999998765421 111 257999999999655334699998877666554
Q ss_pred ccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEc
Q 040741 280 PLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFA 359 (457)
Q Consensus 280 ~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (457)
...... ...++.++..++++.++++.. ++.++..++++++++++.+.|.+ . ++.+..+ . ..++.+.+.
T Consensus 262 ~~~~~~-----~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~-~---~~~~~i~~~ 329 (393)
T TIGR01822 262 QRSRPY-----LFSNSLPPAVVGASIKVLEML-EASNELRDRLWANTRYFRERMEA-A-GFDIKPA-D---HPIIPVMLY 329 (393)
T ss_pred HhCccc-----eecCCCCHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHH-c-CCCCCCC-C---CCEEEEEeC
Confidence 322111 123455556666666777665 34677888999999999999988 3 6655432 1 234444443
Q ss_pred c-ccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 360 Y-VEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 360 ~-~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
. ....++...| +||.+. +..+ +. .......+||+++.+++++||++++++|++++++++
T Consensus 330 ~~~~~~~l~~~L~~~gI~v~-~~~~-~~--------------~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~~~ 391 (393)
T TIGR01822 330 DAVLAQRFARRLLEEGIYVT-GFFY-PV--------------VPKGQARIRVQISAAHTEEQLDRAVEAFTRIGRELG 391 (393)
T ss_pred CHHHHHHHHHHHHHCCeeEe-eeCC-CC--------------CCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHhC
Confidence 2 2345666665 688776 3221 10 011235799999999999999999999999877653
No 46
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=3.8e-31 Score=247.88 Aligned_cols=352 Identities=18% Similarity=0.200 Sum_probs=279.5
Q ss_pred ccCCCCcccccceecccccCCCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh
Q 040741 36 TAYEPQEDQNGITLKGVRIAGRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI 114 (457)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~ 114 (457)
++|++|++..+.+...+.+.+.++||.|+... ++.+.+.+++..+.....+. .+ -.+..+.+.++++.+|+++
T Consensus 122 S~D~n~tfk~tG~~~~~lNlgSYNYLGFa~~~g~ca~~~~~~~~kygl~~css----~~--e~G~~~~hkelE~l~A~f~ 195 (519)
T KOG1357|consen 122 SDDYNWTFKYTGTRSRCLNLGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSS----RH--EAGTTEEHKELEELVARFL 195 (519)
T ss_pred ccCCCceEEeccceeeeeeecccccccccccCCcCChHHHHHHHHhccccccc----ch--hcccHHHHHHHHHHHHHhc
Confidence 34899999999999999999999999998877 99999999999986543221 11 2234478999999999999
Q ss_pred CCCCCcEEEeCC-hHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhc
Q 040741 115 GASPKEIIFTSG-ATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAI 193 (457)
Q Consensus 115 g~~~~~i~~t~g-~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i 193 (457)
|+++. ++|..| +|.++ .+.+++ .++..||.++.+|.+....++.. |+.++.+..+ |+.+||+.+
T Consensus 196 g~e~a-~vF~mGf~TNs~--~~p~l~----~~gsLIiSDelNHaSi~~GaRLS---gAtiRVfkHN-----dm~~LEr~L 260 (519)
T KOG1357|consen 196 GVEDA-IVFSMGFATNSM--NIPSLL----GKGSLIISDELNHASLITGARLS---GATTRVFRHN-----DMQGLERLL 260 (519)
T ss_pred CCcce-EEEecccccccc--Ccceee----cCCcceeeccccchheecccccc---CceEEEEecC-----CHHHHHHHH
Confidence 98753 677666 55554 456677 89999999999999999999887 9999999988 888888887
Q ss_pred CC-------------CceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCc---------ccCCCCcccE
Q 040741 194 RP-------------DTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIP---------VDVEKWNVSL 251 (457)
Q Consensus 194 ~~-------------~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~---------~~~~~~~~Di 251 (457)
++ ++.+|+++...++-|.+..++++.+++|+|+.++++|+||+.|+.. ..++..++|+
T Consensus 261 rd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDI 340 (519)
T KOG1357|consen 261 RDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDI 340 (519)
T ss_pred HHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhhee
Confidence 63 2357888999989999999999999999999999999999987762 2344446899
Q ss_pred EEeccccccCCCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHH-----hhHHHHHHHHHHH
Q 040741 252 MSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKK-----EMDYDHKRITALH 326 (457)
Q Consensus 252 ~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~-----~~~~~~~~~~~~~ 326 (457)
++++++|.||..| |++.++++.++.++...... ......+++.+.....+++.+.. ..++..+++.+++
T Consensus 341 mMGtftKSfga~G-Gyiagsk~lid~lrt~s~~~-----~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns 414 (519)
T KOG1357|consen 341 MMGTFTKSFGAAG-GYIAGSKELIDYLRTPSPSA-----LYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENS 414 (519)
T ss_pred ecceehhhccccc-ceecCcHHHHhhhccCCCce-----eecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhh
Confidence 9999999999987 99999998887776544332 23346677777777788888763 2688889999999
Q ss_pred HHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHHhcccCeEecccCccCCCCCChhHHHHHcCCCccCCCCeE
Q 040741 327 DRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGLKEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSI 406 (457)
Q Consensus 327 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~i 406 (457)
++++..+++ .++.++++.++++.+++.+.........-.+.-+++++..+.+..++.+ .+++
T Consensus 415 ~yfr~~l~~--~gfivyG~~dSpVvplll~~~~k~~~f~r~~l~~nigvVvvgfPatpl~----------------e~r~ 476 (519)
T KOG1357|consen 415 RYFRWELQK--MGFIVYGNNDSPVVPLLLYGPAKIVAFSREMLERNIGVVVVGFPATPLL----------------ESRA 476 (519)
T ss_pred HHHHHhhhc--CcEEEecCCCCCcceeeecCcccccHHHHHHHhcCceEEEEeCCCchHH----------------HhHH
Confidence 999999999 7999999999888887766665443333222336777766655443222 2789
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 407 RFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 407 Ri~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
||+.+..++.|++|++++.+.+.-++
T Consensus 477 R~c~Sa~ht~e~ld~~l~~i~~~g~~ 502 (519)
T KOG1357|consen 477 RFCLSASHTKEDLDRALEVIDRVGDE 502 (519)
T ss_pred HhhhcccccHHHHHHHHHHHhhhchh
Confidence 99999999999999999999888754
No 47
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.97 E-value=3.6e-28 Score=240.77 Aligned_cols=329 Identities=18% Similarity=0.203 Sum_probs=238.4
Q ss_pred EecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhh
Q 040741 60 YLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVM 139 (457)
Q Consensus 60 ~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~ 139 (457)
+|.+.++. +.+.+.+++..++....+++.. + ....+..+++++++++++|++++++++++|+|+++.+++.++.
T Consensus 24 ~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~ 97 (373)
T TIGR03812 24 ILGSMCTN-PHPIAVKAYDMFIETNLGDPGL--F---PGTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAK 97 (373)
T ss_pred EEEEEeCC-chHHHHHHHHHHhhcCCCCccc--C---ccHHHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHH
Confidence 44444443 4455688888887655555431 1 1234677899999999999988788999999999988887765
Q ss_pred hhh--cCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHH
Q 040741 140 HFY--KDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEE 217 (457)
Q Consensus 140 ~~~--~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~ 217 (457)
... +.+|+.|+++.++|.++..+++.. |++++.++.+.++.+|++++++++++++..+++..++|++|.+.|+++
T Consensus 98 ~~~~~~~~g~~vl~~~~~h~~~~~~~~~~---G~~~~~v~~~~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~~~~ 174 (373)
T TIGR03812 98 NLAREEKRTPNIIVPESAHFSFEKAAEML---GLELRYAPLDEDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDDIEE 174 (373)
T ss_pred HHHhccCCCcEEEECCcchHHHHHHHHHc---CCeEEEEeeCCCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCCHHH
Confidence 321 146689999999999988776655 999999999888889999999999888754444447899999999999
Q ss_pred HHHHHHhcCCcEEEehhhhcCCC----------cccCCCCcccEEEeccccc-cCCCCceEEEE-ecCCCcccc---ccc
Q 040741 218 IGQICKEFKIPFHTDAAQALGKI----------PVDVEKWNVSLMSLSGHKI-YGPKGVGALYM-RRRPRIRVE---PLI 282 (457)
Q Consensus 218 i~~l~~~~~v~li~D~a~~~g~~----------~~~~~~~~~Di~~~s~~K~-~g~~G~G~l~~-~~~~~~~~~---~~~ 282 (457)
|.++|+++|+++|+|+||+.+.. .+++...++|++++|+||+ ++|.|+|+++. +++.++.+. +..
T Consensus 175 i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~~l~~~~~~~ 254 (373)
T TIGR03812 175 LSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKSYLKYLSVDAPYL 254 (373)
T ss_pred HHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCHHHHhhhcccCccc
Confidence 99999999999999999985532 2344334789999999995 45656666654 444444432 111
Q ss_pred cCCccccccccCCCChhHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccc
Q 040741 283 NGGGQERGIRSGTLPTPLIVGFGSACEIAK-KEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYV 361 (457)
Q Consensus 283 ~~~~~~~~~~~~t~~~~~~~al~~al~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (457)
.+.. .....|+.+...+.++..+++.+. +++++..++..++++++++.|++ ++...+.. + ..+++.+.++
T Consensus 255 ~~~~--~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~-~---~~~~v~~~~~-- 325 (373)
T TIGR03812 255 TVKK--QATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKK-IGFEPVIE-P---VLNIVAFEVD-- 325 (373)
T ss_pred CCCC--CcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHh-CCCeEEcC-C---CceEEEEEeC--
Confidence 1110 111235777778888888888764 46888999999999999999999 64333433 1 2445555554
Q ss_pred cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHH
Q 040741 362 EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVK 428 (457)
Q Consensus 362 ~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~ 428 (457)
+..++...| +||.+.... ..+.|||+++.++|++|+|+++++|++
T Consensus 326 ~~~~v~~~L~~~gi~v~~~~----------------------~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 326 DPEEVRKKLRDRGWYVSVTR----------------------CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred CHHHHHHHHHHCCceeccCC----------------------CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 234566666 577765321 126899999999999999999999975
No 48
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.97 E-value=3.9e-29 Score=245.07 Aligned_cols=281 Identities=21% Similarity=0.233 Sum_probs=217.5
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCC--CCcEEEeCChHHHHHHHHHHhhhhhc----------CCCCEEEEcCCCCcchH
Q 040741 93 HLFGWESEVAVETARSQIADLIGAS--PKEIIFTSGATESNNVSIKGVMHFYK----------DKKRHVITTQTEHKCVL 160 (457)
Q Consensus 93 ~~~~~~~~~~~~~~~~~la~~~g~~--~~~i~~t~g~T~a~~~al~~~~~~~~----------~~g~~vi~~~~~h~~~~ 160 (457)
+..+....+..+++++++++++|++ +++++||+|||+|+.+++.++...+. ..+..|+++..+|.++.
T Consensus 30 y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~ 109 (345)
T cd06450 30 WDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVE 109 (345)
T ss_pred cccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHH
Confidence 3444455567777889999999985 34799999999999999998864221 12458899999999998
Q ss_pred HHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC------CceEEEEeccccccccccChHHHHHHHHhcCCcEEEehh
Q 040741 161 DSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP------DTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAA 234 (457)
Q Consensus 161 ~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~------~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a 234 (457)
.+++.+ |.+++.++.+.++.+|+++|++++++ +++++++++++|++|.+.|+++|.++|+++|+++|+|++
T Consensus 110 ~~~~~~---g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a 186 (345)
T cd06450 110 KAAAYL---DVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAA 186 (345)
T ss_pred HHHHHH---hcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEech
Confidence 888777 99999999988889999999999987 788999999999999999999999999999999999999
Q ss_pred hhcCCCcccCCC------CcccEEEecccc-ccCCCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHH
Q 040741 235 QALGKIPVDVEK------WNVSLMSLSGHK-IYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSA 307 (457)
Q Consensus 235 ~~~g~~~~~~~~------~~~Di~~~s~~K-~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~a 307 (457)
|+.+..+.+... .++|++++|+|| +++|.|+|+++++ ..++..+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~-----------------------------~~~~~~~ 237 (345)
T cd06450 187 YGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR-----------------------------ALKLWAT 237 (345)
T ss_pred hhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH-----------------------------HHHHHHH
Confidence 998876543221 268999999999 4578889988776 3333345
Q ss_pred HHHHH-HhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcc-----ccchHHHhcc--cCeEecccC
Q 040741 308 CEIAK-KEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAY-----VEGESLLMGL--KEVAVSSGS 379 (457)
Q Consensus 308 l~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l--~~i~~~~g~ 379 (457)
++.+. .+++++.++..++++++.+.|.+ ++++.+..++. .+++.+.++. ....++...| +|+.+.++.
T Consensus 238 l~~l~~~g~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~---~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~ 313 (345)
T cd06450 238 LRRFGRDGYGEHIDRIVDLAKYLAELIRA-DPGFELLGEPN---LSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPAT 313 (345)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEecCCc---eeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEee
Confidence 55444 36889999999999999999999 88888776432 4566666653 2334566666 344443321
Q ss_pred ccCCCCCChhHHHHHcCCCccCCCCeEEEecCCC-CCHHHHHHHHHHHHH
Q 040741 380 ACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRF-TTEAEVDRAIELTVK 428 (457)
Q Consensus 380 ~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~-~t~edid~~~~~l~~ 428 (457)
.. + ...++|++++.. ++++|+|+++++|++
T Consensus 314 ~~--------------~-----~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 314 TL--------------G-----GPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred EE--------------C-----CeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 10 0 237899999986 599999999999875
No 49
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.97 E-value=9.7e-29 Score=242.63 Aligned_cols=326 Identities=19% Similarity=0.201 Sum_probs=235.3
Q ss_pred EecCCCCC----CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHH
Q 040741 60 YLDMQATT----PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSI 135 (457)
Q Consensus 60 ~l~~~~~~----~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al 135 (457)
||+|.++. +-+|++++++.+++++ ++++.+ .+...+...+...++++.+++++|++. .+++++||+++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~-~~~~~~~~~~~~~~l~~~la~~~~~~~--~iv~~sg~~a~~~~~ 78 (349)
T cd06454 3 VLNFCSNDYLGLANHPEVIEAAKEALDK-YGVGAG-GSRLISGTSDLHEELEEELAEFHGKEA--ALVFSSGYAANDGVL 78 (349)
T ss_pred ceecccCCccccCCCHHHHHHHHHHHHH-hCCCCC-CcCeecCCchHHHHHHHHHHHHhCCCC--EEEeccHHHHHHHHH
Confidence 45555544 3369999999999975 444332 222222334788999999999999853 667777889999888
Q ss_pred HHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC-----CceEEEEeccccccc
Q 040741 136 KGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP-----DTGLISVMAVNNEIG 210 (457)
Q Consensus 136 ~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~-----~t~li~i~~~~~~~G 210 (457)
.++. ++|++|++++++|++...+++.. |.++++++. +|++++++++++ +++++++++++|++|
T Consensus 79 ~~~~----~~gd~Vl~~~~~~~~~~~~~~~~---g~~~~~~~~-----~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG 146 (349)
T cd06454 79 STLA----GKGDLIISDSLNHASIIDGIRLS---GAKKRIFKH-----NDMEDLEKLLREARRPYGKKLIVTEGVYSMDG 146 (349)
T ss_pred HHhc----CCCCEEEEehhhhHHHHHHHHHc---CCceEEecC-----CCHHHHHHHHHHhhccCCCeEEEEeccccCCC
Confidence 8887 89999999999999988776554 988887753 478888888863 578999999999999
Q ss_pred cccChHHHHHHHHhcCCcEEEehhhhcCCCc--------ccCCCCcccEEEeccccccCCCCceEEEEecCCCccccccc
Q 040741 211 VIQPMEEIGQICKEFKIPFHTDAAQALGKIP--------VDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLI 282 (457)
Q Consensus 211 ~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~--------~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~ 282 (457)
...|+++|.++|+++|+++|+|++|+.|... .+....+.|+++.|+||.+|+.| |+++.+++..+++....
T Consensus 147 ~~~~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g-G~i~~~~~~~~~~~~~~ 225 (349)
T cd06454 147 DIAPLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG-GYIAGSKELIDYLRSYA 225 (349)
T ss_pred CccCHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC-CEEECCHHHHHHHHHhc
Confidence 9999999999999999999999999876543 12234468999999999888876 88888766554443322
Q ss_pred cCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEc-cc
Q 040741 283 NGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFA-YV 361 (457)
Q Consensus 283 ~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 361 (457)
... ...++.+...++++.++++.... .+...++++++++++.+.|.+ + ++.+.+++. ..+..+.+. ..
T Consensus 226 ~~~-----~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~l~~~l~~-~-g~~~~~~~~---~~~~~~~~~~~~ 294 (349)
T cd06454 226 RGF-----IFSTSLPPAVAAAALAALEVLQG-GPERRERLQENVRYLRRGLKE-L-GFPVGGSPS---HIIPPLIGDDPA 294 (349)
T ss_pred hhh-----hccCCCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHh-c-CCcccCCCC---CcEEEEeCCChH
Confidence 111 11235667777778788876654 567788999999999999988 4 666655422 222222222 23
Q ss_pred cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Q 040741 362 EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQ 429 (457)
Q Consensus 362 ~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~ 429 (457)
+..++...| +||.+.++..... ....+.|||+++.+++++|+++++++|+++
T Consensus 295 ~~~~~~~~L~~~gI~~~~~~~~~~----------------~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 295 KAVAFSDALLERGIYVQAIRYPTV----------------PRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred HHHHHHHHHHhCCceEEEecCCcc----------------CCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 345666666 5887765422110 112379999999999999999999999864
No 50
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.97 E-value=3.4e-28 Score=241.83 Aligned_cols=338 Identities=17% Similarity=0.182 Sum_probs=242.5
Q ss_pred CcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCC---CCcEEEeCChHHHHH
Q 040741 57 RPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGAS---PKEIIFTSGATESNN 132 (457)
Q Consensus 57 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~---~~~i~~t~g~T~a~~ 132 (457)
+.++|+.+.+. ++++.+.+++.+++... ... .|....+..+..+.+++.+++++|.. ++++++|+|+++++.
T Consensus 28 ~~~~l~~g~~~~~~~~~~~~a~~~~~~~~--~~~--~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~ 103 (389)
T PRK05957 28 GTISLGQGVVSYPPPPEAIEALNNFLANP--ENH--KYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFM 103 (389)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhCC--CCC--CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHH
Confidence 56888887776 67889999998877532 111 12112233467778888888888873 567999999999999
Q ss_pred HHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccc
Q 040741 133 VSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVI 212 (457)
Q Consensus 133 ~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~ 212 (457)
.++.+++ ++||+|+++.+.|..+...++. .|.++++++.+.++.+|++++++++++++++|++++++||||.+
T Consensus 104 ~~~~~~~----~~gd~Vlv~~P~y~~~~~~~~~---~g~~~~~v~~~~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~ 176 (389)
T PRK05957 104 NAILAIT----DPGDEIILNTPYYFNHEMAITM---AGCQPILVPTDDNYQLQPEAIEQAITPKTRAIVTISPNNPTGVV 176 (389)
T ss_pred HHHHHhc----CCCCEEEEeCCCCcCHHHHHHh---cCCEEEEeecCCCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcC
Confidence 9998887 8999999999999887665554 49999999988777899999999999999999999999999999
Q ss_pred cC---hHHHHHHHHhcCCcEEEehhhhcCCC------c-ccC-CCCcccEEEeccccccCCCC--ceEEEEecCCCcccc
Q 040741 213 QP---MEEIGQICKEFKIPFHTDAAQALGKI------P-VDV-EKWNVSLMSLSGHKIYGPKG--VGALYMRRRPRIRVE 279 (457)
Q Consensus 213 ~~---l~~i~~l~~~~~v~li~D~a~~~g~~------~-~~~-~~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~~~ 279 (457)
+| +++|+++|+++|+++++|++++-... + ... +.....+++.|++|.+|.+| +|+++++++.++++.
T Consensus 177 ~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~ 256 (389)
T PRK05957 177 YPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHLLEAIK 256 (389)
T ss_pred cCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCHHHHHHHH
Confidence 98 88899999999999999999862211 1 111 11224578889999888777 999999887766665
Q ss_pred ccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCe-EEeCCCCCcccceEEEEE
Q 040741 280 PLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGV-VVNGSMERRYIGNLNLSF 358 (457)
Q Consensus 280 ~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~ 358 (457)
..... .....+.....++..+++.....+++..++++++++.+.+.|++ ++++ .+.. +.. +.++.+.+
T Consensus 257 ~~~~~-------~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~~~-~~g--g~~~~~~~ 325 (389)
T PRK05957 257 KIQDT-------ILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQ-LQDRCTLHP-ANG--AFYCFLKV 325 (389)
T ss_pred HHHhh-------cccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh-cCCCccccC-CCe--eEEEEEeC
Confidence 44321 11133333333333344322223566777788899999999988 6664 3322 221 22333444
Q ss_pred c-cccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 359 A-YVEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 359 ~-~~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
+ +.+..++...+ +||.+.+|..|.. . ..+++||+++.. +.+++++.+++|.+.++++.
T Consensus 326 ~~~~~~~~~~~~l~~~~gv~v~pg~~f~~--------------~---~~~~iRis~~~~-~~~~l~~~~~~l~~~~~~~~ 387 (389)
T PRK05957 326 NTDLNDFELVKQLIREYRVAVIPGTTFGM--------------K---NGCYLRIAYGAL-QKATAKEGIERLVQGLKTIV 387 (389)
T ss_pred CCCCChHHHHHHHHHHCCEEEccchhhCC--------------C---CCCEEEEEEecC-CHHHHHHHHHHHHHHHHhhh
Confidence 3 34566777765 5899999875421 1 136999999763 58899999999999887653
No 51
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.97 E-value=2.4e-28 Score=244.15 Aligned_cols=340 Identities=14% Similarity=0.122 Sum_probs=230.7
Q ss_pred CCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccch--hhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHH
Q 040741 56 GRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLF--GWESEVAVETARSQIADLIGASPKEIIFTSGATESNNV 133 (457)
Q Consensus 56 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~--~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~ 133 (457)
.+.+.|..+.++..+|+++++..... ... +.+. .+.. ..+..+..+++++++++++|++.++++++++|+.+.+.
T Consensus 20 ~~~~~l~~g~~~~~~p~~~~~~~~~~-~~~-~~~~-~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~ 96 (398)
T cd00613 20 QSMSFLGSGTYKHNPPAVIKRNILEN-EFY-TAYT-PYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEA 96 (398)
T ss_pred cCcccccccccCCcCcHHHHHHhccc-cCc-ccCC-CCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHH
Confidence 34478888888866666666644433 110 1000 0100 22344788899999999999987678888877765555
Q ss_pred HHHHhhhhhcCC--CCEEEEcCCCCcchHHHHHHHH-hcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccc
Q 040741 134 SIKGVMHFYKDK--KRHVITTQTEHKCVLDSCRHLQ-QEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIG 210 (457)
Q Consensus 134 al~~~~~~~~~~--g~~vi~~~~~h~~~~~~~~~~~-~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G 210 (457)
++..+.. .+ |++|++++++|+++..++..+. ..|++++.++.+.++.+|++++++++++++++|++++++ ++|
T Consensus 97 ~~~~~~~---~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~t~~viv~~~~-~~G 172 (398)
T cd00613 97 AGLAAIR---AYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVSEEVAALMVQYPN-TLG 172 (398)
T ss_pred HHHHHHh---cccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcCCCeEEEEEECCC-CCc
Confidence 5554432 44 9999999999999998887762 334899999988777899999999999999999999985 799
Q ss_pred cccCh-HHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCC-----CCceEEEEecCCCccccccccC
Q 040741 211 VIQPM-EEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGP-----KGVGALYMRRRPRIRVEPLING 284 (457)
Q Consensus 211 ~~~~l-~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~-----~G~G~l~~~~~~~~~~~~~~~~ 284 (457)
.+.++ ++|+++|++||+++|+|++|+.+....+...+++|++++|+||+++| +|+|+++++++..+.+.+...+
T Consensus 173 ~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~~~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~ 252 (398)
T cd00613 173 VFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEYGADIVVGNLQKTGVPHGGGGPGAGFFAVKKELVRFLPGRLVG 252 (398)
T ss_pred eecchHHHHHHHHHhcCCEEEEEeccccccCCCChHHcCCCEEEeeccccCCCCCCCCCceeEEEEhhhhHhhCCCCeec
Confidence 99885 99999999999999999999877666666667899999999997643 4589999988766655443222
Q ss_pred Ccc-----------------ccccccCCCC-----hhHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHhhcCCCeE
Q 040741 285 GGQ-----------------ERGIRSGTLP-----TPLIVGFGSACEIA-KKEMDYDHKRITALHDRLLNGIKEKLDGVV 341 (457)
Q Consensus 285 ~~~-----------------~~~~~~~t~~-----~~~~~al~~al~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 341 (457)
+.. ..++..++.+ .....++..++... ..+++++.++.+++++++++.|.+ +++..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~~~~~ 331 (398)
T cd00613 253 VTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKE-VGGVL 331 (398)
T ss_pred cccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHh-cCCcc
Confidence 210 0001122222 12222222333333 346788899999999999999998 65543
Q ss_pred EeCCCCCcccceEEEEEcc---ccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCH
Q 040741 342 VNGSMERRYIGNLNLSFAY---VEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTE 416 (457)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~ 416 (457)
... ......+.+.++. .+..++...| ++|.+... . ....+.||++++.++|+
T Consensus 332 ~~~---~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~~~----------------~----~~~~~~lRis~~~~~t~ 388 (398)
T cd00613 332 PFN---GPFFHEFVLRLPPLYGIRAEDLAKALIDGGFHAPTM----------------Y----LPVDGTLMIEPTETETK 388 (398)
T ss_pred cCC---CCeeEEEEEEcCCcchHHHHHHHHhhhhcCcccccc----------------c----cCCCCeEEEEcCCCCCH
Confidence 211 1122333445442 2345566665 34432110 0 01237899999999999
Q ss_pred HHHHHHHHHH
Q 040741 417 AEVDRAIELT 426 (457)
Q Consensus 417 edid~~~~~l 426 (457)
||||+++++|
T Consensus 389 edid~~~~~L 398 (398)
T cd00613 389 EELDALLEAL 398 (398)
T ss_pred HHHHHHHHhC
Confidence 9999998864
No 52
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.97 E-value=9.2e-29 Score=242.26 Aligned_cols=330 Identities=16% Similarity=0.142 Sum_probs=239.3
Q ss_pred CCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCC-cEEEe-CChHHHHHHHHHHhhhh
Q 040741 64 QATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPK-EIIFT-SGATESNNVSIKGVMHF 141 (457)
Q Consensus 64 ~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~-~i~~t-~g~T~a~~~al~~~~~~ 141 (457)
.|+..++++++++|.....+...- ...+..+.+.++++++.++++++++++ +++|+ +|||.++++++.++.
T Consensus 9 pGP~~~~~~v~~a~~~~~~~~~~~-----~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~-- 81 (361)
T TIGR01366 9 SGPSKVRLEQLQALTTTAASLFGT-----SHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLI-- 81 (361)
T ss_pred CCCcCCCHHHHHHHHhcCcccccc-----CcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcc--
Confidence 467789999999987543222211 122446668999999999999999544 68886 669999999999986
Q ss_pred hcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHH
Q 040741 142 YKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQI 221 (457)
Q Consensus 142 ~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l 221 (457)
.+ +.+++...+|...+.........+.++..++.+.+..++. .+++++++|+++|..|.+|.+.|+++|
T Consensus 82 --~~-~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~lV~~~h~et~tG~~~pi~~I--- 150 (361)
T TIGR01366 82 --EK-KSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADPGSAPEP-----QADPGVDVIAWAHNETSTGVAVPVRRP--- 150 (361)
T ss_pred --cc-cccEEecCHHHHHHHHHHHhhhccCCceEEecCCCCCCCC-----ccCCCCCEEEEcccCCccceecccccc---
Confidence 33 3334445666655543332211122677777665544433 456899999999999999999999988
Q ss_pred HHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCC-CCceEEEEecCCCccccccccCCc----c---------
Q 040741 222 CKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGP-KGVGALYMRRRPRIRVEPLINGGG----Q--------- 287 (457)
Q Consensus 222 ~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~-~G~G~l~~~~~~~~~~~~~~~~~~----~--------- 287 (457)
+|++|+++++|+++++|..+++++. +|++++|.||++|+ +|+++++++++..+++.+...++. .
T Consensus 151 ~~~~g~~~iVDavqs~g~~~idv~~--~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~ 228 (361)
T TIGR01366 151 EGSDDALVVIDATSGAGGLPVDIAE--TDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDN 228 (361)
T ss_pred cccCCCeEEEEcCccccCCCCCHHH--CCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhc
Confidence 5889999999999999999999985 89999999997664 578888889987777665443321 0
Q ss_pred -ccccccCCCChhHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCC-CCcccceEEEEE-cccc
Q 040741 288 -ERGIRSGTLPTPLIVGFGSACEIAKK--EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSM-ERRYIGNLNLSF-AYVE 362 (457)
Q Consensus 288 -~~~~~~~t~~~~~~~al~~al~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~ 362 (457)
..+...+|++...++++..+++++.+ +++.+.++.+++++++++.+.+ ++.+.++... ..+......+.| .+.+
T Consensus 229 ~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~-~~~~~~~~~~~~~~s~~v~~v~~~~g~~ 307 (361)
T TIGR01366 229 SLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQE-RPYATPFVTDPGKRSQVVGTIDFVDDID 307 (361)
T ss_pred cccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHh-CCCcccCCCChhhcccceEEEECCCccC
Confidence 11234578888888899999999876 3899999999999999999999 7666665432 212222233444 3456
Q ss_pred chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 363 GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 363 ~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
..++...| +||.+.++.. .+ ..+.+|+++..++|.+||++++++|+++++++
T Consensus 308 ~~~v~~~L~~~gI~i~~~~~-------------~l------~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 308 AATVAKILRANGIVDTEPYR-------------KL------GRNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred HHHHHHHHHHCCCeeccCcc-------------cc------CCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 66676666 5787754321 11 22689999999999999999999999987753
No 53
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.97 E-value=5.1e-28 Score=240.46 Aligned_cols=333 Identities=17% Similarity=0.161 Sum_probs=237.4
Q ss_pred CcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhC--CCCCcEEEeCChHHHHHH
Q 040741 57 RPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIG--ASPKEIIFTSGATESNNV 133 (457)
Q Consensus 57 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g--~~~~~i~~t~g~T~a~~~ 133 (457)
+.+.|+.+.+. ++++.+.+++.+.+.+.. . .|....+..+..+.+.+.+.++.| ++++++++|+|+++|+.+
T Consensus 25 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~----~-~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~ 99 (382)
T PRK06108 25 GVLPLWFGESDLPTPDFIRDAAAAALADGE----T-FYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALML 99 (382)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHhcCC----C-CCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHH
Confidence 45777776666 568899999988875421 0 011111222444455555555557 678899999999999999
Q ss_pred HHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC---CCCCCHHHHHHhcCCCceEEEEeccccccc
Q 040741 134 SIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA---DGIVNLDELRAAIRPDTGLISVMAVNNEIG 210 (457)
Q Consensus 134 al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~---~~~~d~~~le~~i~~~t~li~i~~~~~~~G 210 (457)
++.++. ++|+.|++..+.|+.+...++.. |.+++.++.+. ++.+|+++++++++++++++++++++||+|
T Consensus 100 ~~~~l~----~~gd~vl~~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG 172 (382)
T PRK06108 100 AAQALV----GPGDEVVAVTPLWPNLVAAPKIL---GARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTG 172 (382)
T ss_pred HHHHhc----CCCCEEEEeCCCccchHHHHHHC---CCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCC
Confidence 999887 89999999999999888776655 99999999863 245899999999998999999999999999
Q ss_pred cccC---hHHHHHHHHhcCCcEEEehhhhcCCCc--------ccCCC-CcccEEEeccccccCCCC--ceEEEEecCCCc
Q 040741 211 VIQP---MEEIGQICKEFKIPFHTDAAQALGKIP--------VDVEK-WNVSLMSLSGHKIYGPKG--VGALYMRRRPRI 276 (457)
Q Consensus 211 ~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~~--------~~~~~-~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~ 276 (457)
.+.+ +++|+++|+++|+++|+|++|+..... .++.. .+..+++.|++|.+|.+| +|+++++++.++
T Consensus 173 ~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~~ 252 (382)
T PRK06108 173 WTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALGQ 252 (382)
T ss_pred cccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHHH
Confidence 9887 678899999999999999998743221 11111 134588999999887555 899999877666
Q ss_pred cccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEE
Q 040741 277 RVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNL 356 (457)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 356 (457)
++...... .....+.....++..++....+.+++..++++++++++.+.|++ ++++.+..+. . +.++.+
T Consensus 253 ~~~~~~~~-------~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~p~-~--g~~~~~ 321 (382)
T PRK06108 253 VLEKLIEY-------NTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRA-LPGVEVAKPD-G--AMYAFF 321 (382)
T ss_pred HHHHHHHh-------cccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh-CCCCcccCCC-e--eEEEEE
Confidence 55443211 11233444444444555433344678888899999999999988 7787765432 1 233344
Q ss_pred EEcc-ccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 357 SFAY-VEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 357 ~~~~-~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
.++. .+..++...| +||.+.+|..+.+ ...+++||+++. +.++++.++++|+++++
T Consensus 322 ~l~~~~~~~~~~~~ll~~~gV~v~pg~~f~~-----------------~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 322 RIPGVTDSLALAKRLVDEAGLGLAPGTAFGP-----------------GGEGFLRWCFAR--DPARLDEAVERLRRFLA 381 (382)
T ss_pred eCCCCCCHHHHHHHHHHhCCEEEeCchhhCC-----------------CCCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 5543 2445666654 5899988864421 123799999998 78999999999988765
No 54
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.97 E-value=2e-28 Score=240.05 Aligned_cols=317 Identities=18% Similarity=0.230 Sum_probs=234.5
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHH
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVS 134 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~a 134 (457)
++.|.|..+.++ +.++++++++.++.......+.. ...++|+.++++++++++++++++|+|+++..+
T Consensus 19 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~-----------~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~ 87 (346)
T TIGR01141 19 KEVIKLNSNENPFGPPPKAKEALRAEADKLHRYPDP-----------DPAELKQALADYYGVDPEQILLGNGSDEIIELL 87 (346)
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHhHHHhhcCCCC-----------CHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHH
Confidence 467788766655 67899999999986533222211 136899999999999888999999999999999
Q ss_pred HHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccC
Q 040741 135 IKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQP 214 (457)
Q Consensus 135 l~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~ 214 (457)
+.++. ++|+.|+++.+.|+.+...++. .|.+++.++.+.++.+|++++++++++++++|++++++||+|.+.|
T Consensus 88 ~~~l~----~~gd~v~~~~p~y~~~~~~~~~---~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~ 160 (346)
T TIGR01141 88 IRAFL----EPGDAVLVPPPTYSMYEISAKI---HGAEVVKVPLDEDGQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLS 160 (346)
T ss_pred HHHhc----CCCCEEEEcCCCHHHHHHHHHH---cCCeEEEeccCCCCCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCC
Confidence 98887 8899999999988766554444 4999999999888889999999999889999999999999999999
Q ss_pred hHHHHHHHHhc--CCcEEEehhhhcCCC---cccC-CCCcccEEEeccccccCCCC--ceEEEEecCCCccccccccCCc
Q 040741 215 MEEIGQICKEF--KIPFHTDAAQALGKI---PVDV-EKWNVSLMSLSGHKIYGPKG--VGALYMRRRPRIRVEPLINGGG 286 (457)
Q Consensus 215 l~~i~~l~~~~--~v~li~D~a~~~g~~---~~~~-~~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~ 286 (457)
++++.++|+.+ ++++++|++|+.-.. ..+. .....++++.|++|++|.+| +|+++++++.++++.+....
T Consensus 161 ~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~-- 238 (346)
T TIGR01141 161 RSDIEAVLERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVRAP-- 238 (346)
T ss_pred HHHHHHHHHhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCHHHHHHHHhccCC--
Confidence 99999999887 999999999872111 1111 11233577889999887555 89999987766655543321
Q ss_pred cccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHH
Q 040741 287 QERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESL 366 (457)
Q Consensus 287 ~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (457)
...+.+.+.++..+++... .+.+..++++++++++.+.|++ ++++.+.+. . +.++.+.++. +.+++
T Consensus 239 -------~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~-~---g~~~~~~~~~-~~~~~ 304 (346)
T TIGR01141 239 -------FNLSRLAQAAAIAALRDDD-FIEKTVEEINAERERLYDGLKK-LPGLEVYPS-D---ANFVLIRFPR-DADAL 304 (346)
T ss_pred -------CCCCHHHHHHHHHHhCCHH-HHHHHHHHHHHHHHHHHHHHHh-cCCCEECCC-c---CCEEEEecCC-CHHHH
Confidence 1234444444444443322 4677888899999999999998 778776532 1 3455555554 55666
Q ss_pred Hhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHH
Q 040741 367 LMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTV 427 (457)
Q Consensus 367 ~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~ 427 (457)
...| +||.+.+|..+.. . .+++|++++ +++|+++++++|+
T Consensus 305 ~~~L~~~gI~v~~g~~f~~-----------------~-~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 305 FEALLEKGIIVRDLNSYPG-----------------L-PNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred HHHHHHCCeEEEeCCCcCC-----------------C-CCeEEEecC---CHHHHHHHHHHhC
Confidence 6666 6999988764311 1 389999976 6899999998763
No 55
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.97 E-value=7.6e-28 Score=240.22 Aligned_cols=340 Identities=16% Similarity=0.149 Sum_probs=240.5
Q ss_pred cccCCCcEEecCCCCC--CCCHHHHHHHHHHHhhc--cCCCCCCccchhhhHHHHHHHHHHHHHHHhCC--CC-CcEEEe
Q 040741 52 VRIAGRPLYLDMQATT--PVDPRVLDAMLPFYLSR--YGNPHSRTHLFGWESEVAVETARSQIADLIGA--SP-KEIIFT 124 (457)
Q Consensus 52 ~~~~~~~i~l~~~~~~--~~~~~v~~a~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~--~~-~~i~~t 124 (457)
-+...+.++|+.+.+. ++++.+.+++.+.+... .+++. ..+..+..+.+.++++++.|. ++ +++++|
T Consensus 35 ~~~~~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~------~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it 108 (405)
T PRK06207 35 EPLPGRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTE------YRGDADIRELLAARLAAFTGAPVDAADELIIT 108 (405)
T ss_pred CcCCCCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCC------CCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEe
Confidence 3455777899987766 36678888888876532 11111 112234555566666776684 56 789999
Q ss_pred CChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC-----CCCCCCHHHHHHhcCCCceE
Q 040741 125 SGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG-----ADGIVNLDELRAAIRPDTGL 199 (457)
Q Consensus 125 ~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~-----~~~~~d~~~le~~i~~~t~l 199 (457)
+|+++++.+++.+++ ++||.|++..+.|+.+...++.+ |.+++.++.+ .+..+|+++|++++++++++
T Consensus 109 ~Ga~~al~~~~~~l~----~~Gd~Vlv~~P~y~~~~~~~~~~---g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~ 181 (405)
T PRK06207 109 PGTQGALFLAVAATV----ARGDKVAIVQPDYFANRKLVEFF---EGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRV 181 (405)
T ss_pred CCcHHHHHHHHHHhc----CCCCEEEEeCCCchhHHHHHHHc---CCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeE
Confidence 999999999999988 89999999999999888777666 9999988875 24678999999999989999
Q ss_pred EEEeccccccccccC---hHHHHHHHHhcCCcEEEehhhhcC----CCcccCC----CCcccEEEeccccccCCCC--ce
Q 040741 200 ISVMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALG----KIPVDVE----KWNVSLMSLSGHKIYGPKG--VG 266 (457)
Q Consensus 200 i~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g----~~~~~~~----~~~~Di~~~s~~K~~g~~G--~G 266 (457)
|++++++||||.+.+ +++|+++|++||++|++|++++.. .....+. ..+.-+++.|++|.+|.+| +|
T Consensus 182 v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG 261 (405)
T PRK06207 182 FLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLG 261 (405)
T ss_pred EEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceE
Confidence 999999999999998 677888999999999999999742 1111111 1123478899999888656 99
Q ss_pred EEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCC
Q 040741 267 ALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSM 346 (457)
Q Consensus 267 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 346 (457)
+++.+++.++++....... ....+.....++..+++.....+++..++++++++.+.+.|++ ++++.+..+.
T Consensus 262 ~ii~~~~l~~~~~~~~~~~-------~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~~p~ 333 (405)
T PRK06207 262 VAFGSPAIIDRMEKLQAIV-------SLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRG-VEGVFVRAPQ 333 (405)
T ss_pred EEEcCHHHHHHHHHHHhHh-------ccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc-CCCceecCCC
Confidence 9998877666554433211 1122333334444444321123566677778888889899987 7677655421
Q ss_pred CCcccceEEEEEcc--ccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHH
Q 040741 347 ERRYIGNLNLSFAY--VEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDR 421 (457)
Q Consensus 347 ~~~~~~~~~~~~~~--~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~ 421 (457)
. +.++.+.++. .+..++...+ .||.+.+|..+.. ...+++||+++. +.++++.
T Consensus 334 -g--g~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~~-----------------~~~~~~Ris~~~--~~~~l~~ 391 (405)
T PRK06207 334 -A--GSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFSP-----------------HTADSIRLNFSQ--DHAAAVA 391 (405)
T ss_pred -e--eEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhCC-----------------CCCCeEEEEecC--CHHHHHH
Confidence 1 3344455542 3456666665 4999999875421 113799999996 6899999
Q ss_pred HHHHHHHHHHHHH
Q 040741 422 AIELTVKQVEKLR 434 (457)
Q Consensus 422 ~~~~l~~~~~~~~ 434 (457)
.+++|.+++++++
T Consensus 392 al~rl~~~l~~~~ 404 (405)
T PRK06207 392 AAERIAQLIERYR 404 (405)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999988765
No 56
>PRK08960 hypothetical protein; Provisional
Probab=99.97 E-value=4.4e-28 Score=241.05 Aligned_cols=332 Identities=15% Similarity=0.127 Sum_probs=234.9
Q ss_pred CCCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhC------CCCCcEEEeCCh
Q 040741 55 AGRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIG------ASPKEIIFTSGA 127 (457)
Q Consensus 55 ~~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g------~~~~~i~~t~g~ 127 (457)
..+.++|+.+.++ ++++.+.+++.+.+.... . +|.......++|+.++++++ ++++++++|+|+
T Consensus 31 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~---~------~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~ 101 (387)
T PRK08960 31 GHDVIHLEIGEPDFTTAEPIVAAGQAALAAGH---T------RYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGG 101 (387)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhcCC---C------ccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCc
Confidence 3467999999888 679999999999876321 1 11111345667777777763 678899999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCC--CCCCHHHHHHhcCCCceEEEEecc
Q 040741 128 TESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGAD--GIVNLDELRAAIRPDTGLISVMAV 205 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~--~~~d~~~le~~i~~~t~li~i~~~ 205 (457)
++|+.+++.++. ++||+|+++.++|+.+...++.. |.+++.++++.+ +.+|++++++++++++++++++++
T Consensus 102 ~~al~~~~~~~~----~~gd~vlv~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p 174 (387)
T PRK08960 102 SGALLLASSLLV----DPGKHWLLADPGYPCNRHFLRLV---EGAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASP 174 (387)
T ss_pred HHHHHHHHHHhc----CCCCEEEEcCCCCcchHHHHHhc---CCeEEEEecCcccCCCCCHHHHHHHhCccceEEEEECC
Confidence 999999999887 89999999999999998877766 889999988743 468999999999999999999999
Q ss_pred ccccccccCh---HHHHHHHHhcCCcEEEehhhhcCC---CcccCCCC-cccEEEeccccccCCCC--ceEEEEecCCCc
Q 040741 206 NNEIGVIQPM---EEIGQICKEFKIPFHTDAAQALGK---IPVDVEKW-NVSLMSLSGHKIYGPKG--VGALYMRRRPRI 276 (457)
Q Consensus 206 ~~~~G~~~~l---~~i~~l~~~~~v~li~D~a~~~g~---~~~~~~~~-~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~ 276 (457)
+||||.+.+. ++|+++|++||+++++|+++..-. ........ ...+++.|+||.+|.+| +|+++++++.+.
T Consensus 175 ~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~ 254 (387)
T PRK08960 175 ANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLVAPPAAVP 254 (387)
T ss_pred CCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhccCCEEEEeecccccCCcccEEEEEEcCHHHHH
Confidence 9999999984 567778999999999999985321 11111111 23467889999988777 999999887666
Q ss_pred cccccccCCccccccccCCCChhHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEE
Q 040741 277 RVEPLINGGGQERGIRSGTLPTPLIVGFGSACEI-AKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLN 355 (457)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 355 (457)
++....... ....+.....++..++.. ....+.+.++.+++.++.+.+.|++ + ++.+...+.. ..++.
T Consensus 255 ~~~~~~~~~-------~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~p~g--~~f~~ 323 (387)
T PRK08960 255 ELEKLAQNL-------YISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRE-L-GFGIAVEPQG--AFYLY 323 (387)
T ss_pred HHHHHHhhh-------ccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHh-c-CCcCCcCCCe--eEEEE
Confidence 554433211 113344444444444432 2234677778888889999999988 4 4443222221 33334
Q ss_pred EEEcc--ccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHH
Q 040741 356 LSFAY--VEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 356 ~~~~~--~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~ 430 (457)
+.++. .+..++...+ +||.+.+|..|.. . ...++|||+++. +.++++.++++|++++
T Consensus 324 ~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--------------~--~~~~~iRi~~~~--~~~~l~~al~~l~~~~ 385 (387)
T PRK08960 324 ADISAFGGDAFAFCRHFLETEHVAFTPGLDFGR--------------H--QAGQHVRFAYTQ--SLPRLQEAVERIARGL 385 (387)
T ss_pred EeccccCCCHHHHHHHHHHhCCEEEcCchHhCC--------------C--CCCCeEEEEecC--CHHHHHHHHHHHHHHH
Confidence 44442 3456666553 5999999875532 1 123699999996 5788888888887765
Q ss_pred H
Q 040741 431 E 431 (457)
Q Consensus 431 ~ 431 (457)
+
T Consensus 386 ~ 386 (387)
T PRK08960 386 R 386 (387)
T ss_pred h
Confidence 4
No 57
>PLN02822 serine palmitoyltransferase
Probab=99.96 E-value=4.3e-27 Score=238.16 Aligned_cols=334 Identities=14% Similarity=0.156 Sum_probs=239.0
Q ss_pred EEecCCCCC----CCCHHHHHHHHHHHhhcc-CCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHH
Q 040741 59 LYLDMQATT----PVDPRVLDAMLPFYLSRY-GNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNV 133 (457)
Q Consensus 59 i~l~~~~~~----~~~~~v~~a~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~ 133 (457)
-|+|+.+.. ..+|++.+++.+.+++.. +...+ +.-+...+.+.++++.|+++++.+ +.++|++|++ ++..
T Consensus 110 ~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~---r~~yg~~~~~~~Lee~La~~~~~~-~~i~~s~G~~-a~~s 184 (481)
T PLN02822 110 DVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGP---RGFYGTIDVHLDCETKIAKFLGTP-DSILYSYGLS-TIFS 184 (481)
T ss_pred eEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCccc---CccccCHHHHHHHHHHHHHHhCCC-CEEEECCHHH-HHHH
Confidence 355555443 357999999999987632 11111 112344578999999999999965 5688887766 6788
Q ss_pred HHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcC---------CCc-eEEEEe
Q 040741 134 SIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIR---------PDT-GLISVM 203 (457)
Q Consensus 134 al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~---------~~t-~li~i~ 203 (457)
++.++. +++|.|+++...|.++..+++.. |.++++++.+ |+++++..++ +++ ++|+++
T Consensus 185 ai~a~~----~~gd~Ii~d~~~H~s~~~~~~ls---~~~~~~~~~n-----d~~~l~~~l~~~~~~~~~~~~~~~~Ivve 252 (481)
T PLN02822 185 VIPAFC----KKGDIIVADEGVHWGIQNGLYLS---RSTIVYFKHN-----DMESLRNTLEKLTAENKRKKKLRRYIVVE 252 (481)
T ss_pred HHHHhC----CCCCEEEEeCCccHHHHHHHHHc---CCeEEEECCC-----CHHHHHHHHHHHhhhhcccCCCcEEEEEe
Confidence 888887 89999999999999998887766 8899999876 4555544432 234 799999
Q ss_pred ccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCc---------ccCCCCcccEEEeccccccCCCCceEEEEecCC
Q 040741 204 AVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIP---------VDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRP 274 (457)
Q Consensus 204 ~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~---------~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~ 274 (457)
.+++++|.+.|+++|+++|++||+++|+|++|++|... +++....+|+++.|++|.+|..| |+++++++.
T Consensus 253 ~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G-G~i~g~~~i 331 (481)
T PLN02822 253 AIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG-GFCTGSARV 331 (481)
T ss_pred cCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC-eEEEcCHHH
Confidence 99999999999999999999999999999999966432 12222257999999999989887 999988776
Q ss_pred CccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceE
Q 040741 275 RIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNL 354 (457)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 354 (457)
++.++....+. ..++..++..+.+..++++.... .+...++++++.+++++.|.+ .+++.+..+.. ..++
T Consensus 332 i~~~~~~~~~~-----~fsa~lPp~~~~Aa~~aL~~l~~-~~~~~~~l~~~~~~l~~~L~~-~~g~~~~~~~~---spi~ 401 (481)
T PLN02822 332 VDHQRLSSSGY-----VFSASLPPYLASAAITAIDVLED-NPSVLAKLKENIALLHKGLSD-IPGLSIGSNTL---SPIV 401 (481)
T ss_pred HHHHHhcCCce-----eeccccCHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHh-cCCcccCCCCC---CCEE
Confidence 65544322111 22334455556666668876553 367889999999999999998 77777654322 4555
Q ss_pred EEEEccc------c---chHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHH
Q 040741 355 NLSFAYV------E---GESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRA 422 (457)
Q Consensus 355 ~~~~~~~------~---~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~ 422 (457)
.+.+... + ..++...| +||.+.++..... ........+||+++..+|++||+++
T Consensus 402 ~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~--------------~~~~~~~~lRi~is~~~t~edI~~~ 467 (481)
T PLN02822 402 FLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTL--------------DKCRLPVGIRLFVSAGHTESDILKA 467 (481)
T ss_pred EEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCc--------------CCCCCCCcEEEEECCCCCHHHHHHH
Confidence 5666432 1 13455554 4888876532111 0011125799999999999999999
Q ss_pred HHHHHHHHHHHH
Q 040741 423 IELTVKQVEKLR 434 (457)
Q Consensus 423 ~~~l~~~~~~~~ 434 (457)
+++|+++++.+.
T Consensus 468 ~~~l~~~~~~~~ 479 (481)
T PLN02822 468 SESLKRVAASVL 479 (481)
T ss_pred HHHHHHHHHHHh
Confidence 999999988753
No 58
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.96 E-value=6.1e-28 Score=240.32 Aligned_cols=330 Identities=16% Similarity=0.171 Sum_probs=234.5
Q ss_pred CcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh----C--CCCCcEEEeCChHH
Q 040741 57 RPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI----G--ASPKEIIFTSGATE 129 (457)
Q Consensus 57 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~----g--~~~~~i~~t~g~T~ 129 (457)
+.+.|+.+.+. +.++.+.+++.+.+..... .|.......++++.+++++ | ++++++++|+|+|+
T Consensus 34 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~---------~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 104 (391)
T PRK08361 34 NVISLGIGEPDFDTPKNIKEAAKRALDEGWT---------HYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYE 104 (391)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhcCCC---------CCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHH
Confidence 45677766665 3567888888877653210 0111123456777777765 3 56788999999999
Q ss_pred HHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC--CCCCCHHHHHHhcCCCceEEEEecccc
Q 040741 130 SNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA--DGIVNLDELRAAIRPDTGLISVMAVNN 207 (457)
Q Consensus 130 a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~le~~i~~~t~li~i~~~~~ 207 (457)
|+.+++.+++ ++|++|+++.++|.++...+... |++++.++++. ++.+|+++++++++++++++++++++|
T Consensus 105 al~~~~~~l~----~~g~~Vlv~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~N 177 (391)
T PRK08361 105 ATYLAFESLL----EEGDEVIIPDPAFVCYVEDAKIA---EAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNN 177 (391)
T ss_pred HHHHHHHHhc----CCCCEEEEcCCCCcccHHHHHHc---CCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCC
Confidence 9999999887 89999999999999988776665 99999999874 346999999999999999999999999
Q ss_pred ccccccC---hHHHHHHHHhcCCcEEEehhhhcCC----CcccCC--CCcccEEEeccccccCCCC--ceEEEEecCCCc
Q 040741 208 EIGVIQP---MEEIGQICKEFKIPFHTDAAQALGK----IPVDVE--KWNVSLMSLSGHKIYGPKG--VGALYMRRRPRI 276 (457)
Q Consensus 208 ~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~----~~~~~~--~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~ 276 (457)
|+|.+.| +++|.++|+++++++|+|++++... ...... ....++++.|++|.+|.+| +|+++++++.+.
T Consensus 178 PtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~~~~~ 257 (391)
T PRK08361 178 PTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPEQVIK 257 (391)
T ss_pred CCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccCHHHHH
Confidence 9999999 8889999999999999999986321 111111 1245788999999988777 899999876655
Q ss_pred cccccccCCccccccccCCCChhHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceE
Q 040741 277 RVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAK--KEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNL 354 (457)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 354 (457)
++...... ..+..+.....++..+++... +.+++..++++++++.+.+.|++ ++++.+..+.. +.++
T Consensus 258 ~~~~~~~~-------~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~~~~~~~~p~g---~~~~ 326 (391)
T PRK08361 258 DMIKLHAY-------IIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKE-MPHIKVFEPKG---AFYV 326 (391)
T ss_pred HHHHHHhh-------hccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHh-CCCCeecCCCE---EEEE
Confidence 54332210 111233333333333443211 23677888889999999999998 77877655421 2233
Q ss_pred EEEEc--cccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Q 040741 355 NLSFA--YVEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQ 429 (457)
Q Consensus 355 ~~~~~--~~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~ 429 (457)
.+.++ +.+..++...+ +||.+.+|..+.. ...+++||+++. +.++++.++++|+++
T Consensus 327 ~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~-----------------~~~~~iRi~~~~--~~~~l~~al~~l~~~ 387 (391)
T PRK08361 327 FANIDETGMSSEDFAEWLLEKARVVVIPGTAFGK-----------------AGEGYIRISYAT--SKEKLIEAMERMEKA 387 (391)
T ss_pred EEECCCCCCCHHHHHHHHHHhCCEEEcCchhhCC-----------------CCCCEEEEEecC--CHHHHHHHHHHHHHH
Confidence 34444 24566676655 4899998865421 123799999985 678999999999888
Q ss_pred HHH
Q 040741 430 VEK 432 (457)
Q Consensus 430 ~~~ 432 (457)
+++
T Consensus 388 l~~ 390 (391)
T PRK08361 388 LEE 390 (391)
T ss_pred Hhc
Confidence 764
No 59
>PLN00175 aminotransferase family protein; Provisional
Probab=99.96 E-value=2.1e-27 Score=237.36 Aligned_cols=332 Identities=20% Similarity=0.177 Sum_probs=235.4
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh----C--CCCC-cEEEeCCh
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI----G--ASPK-EIIFTSGA 127 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~----g--~~~~-~i~~t~g~ 127 (457)
.+.+.|..+.+. +.++.+.+++.+.+.... + .|... ....++++.+++++ | ++++ ++++|+|+
T Consensus 54 ~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~-~----~Y~~~----~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~ 124 (413)
T PLN00175 54 HGAINLGQGFPNFDGPDFVKEAAIQAIRDGK-N----QYARG----FGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGC 124 (413)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHHhcCC-C----CcCCC----CCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCH
Confidence 456777776666 457888899888876410 0 11111 22344555555544 5 4565 69999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC-CCCCCCHHHHHHhcCCCceEEEEeccc
Q 040741 128 TESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG-ADGIVNLDELRAAIRPDTGLISVMAVN 206 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~-~~~~~d~~~le~~i~~~t~li~i~~~~ 206 (457)
++|+.+++.+++ ++||.|++.++.|+.+...++.. |.+++.++.+ +++.+|+++|++++++++++|++++++
T Consensus 125 ~~al~~~~~~l~----~~gd~Vlv~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~~~~l~~~~~~~~k~i~i~~p~ 197 (413)
T PLN00175 125 TEAIAATILGLI----NPGDEVILFAPFYDSYEATLSMA---GAKIKTVTLRPPDFAVPEDELKAAFTSKTRAILINTPH 197 (413)
T ss_pred HHHHHHHHHHhC----CCCCEEEEeCCCchhHHHHHHHc---CCEEEEEECCcccCCCCHHHHHHhcCcCceEEEecCCC
Confidence 999999999888 89999999999999988777665 9999999987 356889999999999999999999999
Q ss_pred cccccccC---hHHHHHHHHhcCCcEEEehhhhcCCC---cc---cCCC-CcccEEEeccccccCCCC--ceEEEEecCC
Q 040741 207 NEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKI---PV---DVEK-WNVSLMSLSGHKIYGPKG--VGALYMRRRP 274 (457)
Q Consensus 207 ~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~---~~---~~~~-~~~Di~~~s~~K~~g~~G--~G~l~~~~~~ 274 (457)
||||.+++ +++|+++|++|++++|+|++|..... .. .+.. .+..+++.|++|.||.+| +||++++++.
T Consensus 198 NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l 277 (413)
T PLN00175 198 NPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHL 277 (413)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHHH
Confidence 99999987 67789999999999999999864321 11 1111 234688899999887555 8999998876
Q ss_pred CccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceE
Q 040741 275 RIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNL 354 (457)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 354 (457)
++.+...... ...+.+.+...++..+++.....+++..++++++++.+.+.|++ . ++.+..+ +. ..++
T Consensus 278 ~~~l~~~~~~-------~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~p-~g--~~f~ 345 (413)
T PLN00175 278 TWGVRQAHSF-------LTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKE-V-GFKVYPS-SG--TYFV 345 (413)
T ss_pred HHHHHHHHhh-------ccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH-C-CCeecCC-Ce--eEEE
Confidence 6555433211 11244555555555565433345788888999999999999998 4 6666543 21 2233
Q ss_pred EEEEc--cc-cchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHH
Q 040741 355 NLSFA--YV-EGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVK 428 (457)
Q Consensus 355 ~~~~~--~~-~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~ 428 (457)
.+.+. +. +..++...+ .||.+.+|..+.. ......++|||+++. +++++++.+++|++
T Consensus 346 ~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~--------------~~~~~~~~iRls~~~--~~e~l~~~~~rL~~ 409 (413)
T PLN00175 346 MVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYL--------------NPEDGKNLVRFAFCK--DEETLRAAVERMKT 409 (413)
T ss_pred EEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCC--------------CCCCCCCEEEEEEcC--CHHHHHHHHHHHHH
Confidence 33432 22 345666655 4899998875432 111234799999984 68999999999998
Q ss_pred HHH
Q 040741 429 QVE 431 (457)
Q Consensus 429 ~~~ 431 (457)
.++
T Consensus 410 ~~~ 412 (413)
T PLN00175 410 KLK 412 (413)
T ss_pred HHh
Confidence 875
No 60
>PRK07324 transaminase; Validated
Probab=99.96 E-value=6.4e-28 Score=238.24 Aligned_cols=292 Identities=18% Similarity=0.199 Sum_probs=215.7
Q ss_pred HHHHHHHHHHHHhC-CCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC
Q 040741 102 AVETARSQIADLIG-ASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA 180 (457)
Q Consensus 102 ~~~~~~~~la~~~g-~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~ 180 (457)
...++++.++++++ ++++++++|+|+++|+.+++.+++ ++||+|++..+.|..+...++.. |.+++.++.+.
T Consensus 63 G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~~l~----~~gd~Vl~~~P~y~~~~~~~~~~---g~~v~~v~~~~ 135 (373)
T PRK07324 63 GSPEFKEAVASLYQNVKPENILQTNGATGANFLVLYALV----EPGDHVISVYPTYQQLYDIPESL---GAEVDYWQLKE 135 (373)
T ss_pred CCHHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhC----CCCCEEEEcCCCchhHHHHHHHc---CCEEEEEeccc
Confidence 45689999999885 678899999999999999999998 89999999999998887766655 99999999874
Q ss_pred -C-CCCCHHHHHHhcCCCceEEEEeccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCCC---cccC-CCCcccE
Q 040741 181 -D-GIVNLDELRAAIRPDTGLISVMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKI---PVDV-EKWNVSL 251 (457)
Q Consensus 181 -~-~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~---~~~~-~~~~~Di 251 (457)
+ ..+|++++++++++++++|++++++||||.+.+ +++|+++|++||+++++|+++..-.. ...+ ...+..+
T Consensus 136 ~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I 215 (373)
T PRK07324 136 ENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGI 215 (373)
T ss_pred ccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEE
Confidence 2 458999999999999999999999999999999 88899999999999999999863211 1111 1122357
Q ss_pred EEeccccccCCCC--ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 040741 252 MSLSGHKIYGPKG--VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRL 329 (457)
Q Consensus 252 ~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l 329 (457)
.+.|++|.+|.+| +|+++++++.++++....... . .+.+.....++..+++.....+++..+.++++++.+
T Consensus 216 ~~~s~SK~~~~~G~RiG~i~~~~~li~~~~~~~~~~------~-~~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l 288 (373)
T PRK07324 216 STNSMSKTYSLPGIRVGWIAANEEVIDILRKYRDYT------M-ICAGVFDDMLASLALEHRDAILERNRKIVRTNLAIL 288 (373)
T ss_pred EEecchhhcCCccceeEEEecCHHHHHHHHHHhCcE------E-ecCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 7889999888655 899999776666555433211 1 123333333333445433334677777788888888
Q ss_pred HHHHhhcCCCeEEeCCCCCcccceEEEEEcc-ccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCe
Q 040741 330 LNGIKEKLDGVVVNGSMERRYIGNLNLSFAY-VEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTS 405 (457)
Q Consensus 330 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~ 405 (457)
.+.|.+ .+++.+..+ +. +....+.++. .+..++...+ .||.+.+|..+. . .++
T Consensus 289 ~~~l~~-~~~~~~~~p-~g--g~~~~i~~~~~~~~~~~~~~ll~~~gv~v~pg~~F~--------------~-----~~~ 345 (373)
T PRK07324 289 DEWVAK-EPRVSYVKP-KA--VSTSFVKLDVDMPSEDFCLKLLKETGVLLVPGNRFD--------------L-----EGH 345 (373)
T ss_pred HHHHhc-CCCceEECC-Cc--eEEEEEEeCCCCCHHHHHHHHHHhcCEEEECccccC--------------C-----CCe
Confidence 888887 677766543 22 2233444442 3556676664 489999986432 1 269
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 406 IRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 406 iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
+||+++. +++.+++.+++|++++++
T Consensus 346 iRis~~~--~~~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 346 VRIGYCC--DTETLKKGLKKLSEFLRE 370 (373)
T ss_pred EEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 9999975 589999999999998875
No 61
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2e-27 Score=237.04 Aligned_cols=330 Identities=15% Similarity=0.171 Sum_probs=235.4
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh------CCCCCcEEEeCChH
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI------GASPKEIIFTSGAT 128 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~------g~~~~~i~~t~g~T 128 (457)
...+.|..+.+. +.++++.+++.+.+.... . .|+ ......++++.+++++ +++++++++|+|++
T Consensus 31 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~---~Y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~ 101 (393)
T PRK05764 31 RDVISLGAGEPDFDTPEHIKEAAIEALDDGK----T---KYT--PAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAK 101 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhcCC----C---CcC--CCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcH
Confidence 345666665555 456888888888775321 0 011 1123466777777776 45677899999999
Q ss_pred HHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC--CCCCCHHHHHHhcCCCceEEEEeccc
Q 040741 129 ESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA--DGIVNLDELRAAIRPDTGLISVMAVN 206 (457)
Q Consensus 129 ~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~le~~i~~~t~li~i~~~~ 206 (457)
+|+.+++.++. ++|+.|+++.+.|..+..+++.. |.+++.++.+. ++.+|+++++++++++++++++++++
T Consensus 102 ~a~~~~~~~~~----~~gd~vl~~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~ 174 (393)
T PRK05764 102 QALYNAFMALL----DPGDEVIIPAPYWVSYPEMVKLA---GGVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNSPS 174 (393)
T ss_pred HHHHHHHHHhc----CCCCEEEecCCCCcchHHHHHHc---CCEEEEEecCcccCCcCCHHHHHHhhCccceEEEEECCC
Confidence 99999999887 89999999999999888777665 99999999873 35689999999999899999999999
Q ss_pred cccccccC---hHHHHHHHHhcCCcEEEehhhhcCCC------cc-c--CCCCcccEEEeccccccCCCC--ceEEEEec
Q 040741 207 NEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKI------PV-D--VEKWNVSLMSLSGHKIYGPKG--VGALYMRR 272 (457)
Q Consensus 207 ~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~------~~-~--~~~~~~Di~~~s~~K~~g~~G--~G~l~~~~ 272 (457)
||+|.+.+ +++|+++|++||+++++|++++.... ++ . ....+.++++.|++|.+|.+| +|+++.++
T Consensus 175 NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~ 254 (393)
T PRK05764 175 NPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGPK 254 (393)
T ss_pred CCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecCH
Confidence 99999987 77899999999999999999863211 11 1 122346789999999888666 89999887
Q ss_pred CCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccc
Q 040741 273 RPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIG 352 (457)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 352 (457)
+.++++...... ....++.....++..+++...+.+++..++++++++.+.+.|++ ++++.+..+. . +.
T Consensus 255 ~~~~~~~~~~~~-------~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~~-g--~~ 323 (393)
T PRK05764 255 ELIKAMSKLQSH-------STSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNE-IPGLECPKPE-G--AF 323 (393)
T ss_pred HHHHHHHHHHhh-------cccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhh-CCCCcccCCC-c--ce
Confidence 666655443321 11234444444444455422344677788888899999999998 7787765532 1 22
Q ss_pred eEEEEEccc-c-----chHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHH
Q 040741 353 NLNLSFAYV-E-----GESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAI 423 (457)
Q Consensus 353 ~~~~~~~~~-~-----~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~ 423 (457)
++.+.++.. . ..++...+ .||.+.+|..|.. .++|||+++. ++++++.++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~-------------------~~~vRis~~~--~~~~~~~~i 382 (393)
T PRK05764 324 YVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGA-------------------PGYVRLSYAT--SLEDLEEGL 382 (393)
T ss_pred EEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCC-------------------CCEEEEEecC--CHHHHHHHH
Confidence 333344321 1 25555544 4899988865421 2899999874 699999999
Q ss_pred HHHHHHHHHH
Q 040741 424 ELTVKQVEKL 433 (457)
Q Consensus 424 ~~l~~~~~~~ 433 (457)
++|.++++++
T Consensus 383 ~~l~~~~~~~ 392 (393)
T PRK05764 383 ERIERFLESL 392 (393)
T ss_pred HHHHHHHHhh
Confidence 9999998764
No 62
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.96 E-value=2.2e-27 Score=228.91 Aligned_cols=324 Identities=18% Similarity=0.169 Sum_probs=239.1
Q ss_pred EecCCCCCC----CCHHHHHHHHHHHhhc-cCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHH
Q 040741 60 YLDMQATTP----VDPRVLDAMLPFYLSR-YGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVS 134 (457)
Q Consensus 60 ~l~~~~~~~----~~~~v~~a~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~a 134 (457)
.+|+.++.. -.|++++++.+.++++ .|.+.+ +.-.+..+.+.++|+.||+++|.+. +++-++|-.||..+
T Consensus 41 ~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gs---R~i~G~~~~h~~LE~~lA~f~g~e~--al~f~SGy~AN~~~ 115 (388)
T COG0156 41 VLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGS---RLISGTSDLHVELEEELADFLGAEA--ALLFSSGFVANLGL 115 (388)
T ss_pred eEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCc---CcccCCcHHHHHHHHHHHHHhCCCc--EEEEcccchhHHHH
Confidence 444444442 3466778877777763 233322 2223444799999999999999875 55555566689999
Q ss_pred HHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC------CceEEEEeccccc
Q 040741 135 IKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP------DTGLISVMAVNNE 208 (457)
Q Consensus 135 l~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~------~t~li~i~~~~~~ 208 (457)
+.+++ +++|.|+.+..+|.|..++++.. +++++.++++ |++.||+.+.+ +.++|+++.+.++
T Consensus 116 i~~l~----~~~dli~~D~lnHASiidG~rls---~a~~~~f~Hn-----D~~~Le~~l~~~~~~~~~~~~IvtegVfSM 183 (388)
T COG0156 116 LSALL----KKGDLIFSDELNHASIIDGIRLS---RAEVRRFKHN-----DLDHLEALLEEARENGARRKLIVTEGVFSM 183 (388)
T ss_pred HHHhc----CCCcEEEEechhhhhHHHHHHhC---CCcEEEecCC-----CHHHHHHHHHhhhccCCCceEEEEeccccC
Confidence 99999 89999999999999999999877 9999999876 99999999965 3689999999999
Q ss_pred cccccChHHHHHHHHhcCCcEEEehhhhcCCCc---------ccCCCCcccEEEeccccccCCCCceEEEEecCCCcccc
Q 040741 209 IGVIQPMEEIGQICKEFKIPFHTDAAQALGKIP---------VDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVE 279 (457)
Q Consensus 209 ~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~---------~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~ 279 (457)
.|.+.||++|.+++++|+.++++|+||++|... +.+....+||++++++|.+|..| |++.++....+.+.
T Consensus 184 dGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G-g~v~g~~~~~d~L~ 262 (388)
T COG0156 184 DGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG-GYIAGSAALIDYLR 262 (388)
T ss_pred CCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC-ceeeCcHHHHHHHH
Confidence 999999999999999999999999999987653 22322346899999999999886 99999887666554
Q ss_pred ccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEc
Q 040741 280 PLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFA 359 (457)
Q Consensus 280 ~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (457)
...... .++.+.|+...++...+++.+.+ ...++++.+++..+++..+.. .++.+.... .+++.+.+.
T Consensus 263 ~~ar~~-----ifStalpP~~aaa~~~al~~l~~-~~~~r~~L~~~~~~~~~~~~~--~~~~~~~s~----s~I~pv~~g 330 (388)
T COG0156 263 NRARPF-----IFSTALPPAVAAAALAALRILEE-GPERRERLQELAAFFRSLLKA--LGLVLLPSE----SPIIPVILG 330 (388)
T ss_pred HhCCce-----eccCCCCHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHh--cCCccCCCC----CCeeeeEeC
Confidence 433221 34456777777788888888774 478888999999999966655 355442221 233333333
Q ss_pred cc-cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Q 040741 360 YV-EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQ 429 (457)
Q Consensus 360 ~~-~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~ 429 (457)
.. ....+...| +||.+..-.+.+. +.+...||++++..+|++||+.+++++.+.
T Consensus 331 d~~~a~~~s~~l~~~Gi~v~~i~~PTV----------------p~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 331 DEERALEASRALLEEGIYVSAIRPPTV----------------PKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred CHHHHHHHHHHHHHCCeeEeeecCCCC----------------CCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 21 123333333 5777766544433 234479999999999999999999999864
No 63
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.96 E-value=4.2e-27 Score=236.12 Aligned_cols=338 Identities=15% Similarity=0.114 Sum_probs=238.3
Q ss_pred CCCcEEecCCCCC-----CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhC------CCCCcEEE
Q 040741 55 AGRPLYLDMQATT-----PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIG------ASPKEIIF 123 (457)
Q Consensus 55 ~~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g------~~~~~i~~ 123 (457)
..+.|.|..+.++ +.++++.+++.+.+.....+ +|.......++|+.++++++ ++++++++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~--------~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~i 122 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYN--------SYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYL 122 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCC--------CCCCCccCHHHHHHHHHHHhhccCCCCChhhEEE
Confidence 4578888887664 45788999999887642111 11112346678888888874 36778999
Q ss_pred eCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC--CCCCCCHHHHHHhcCCCceEEE
Q 040741 124 TSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG--ADGIVNLDELRAAIRPDTGLIS 201 (457)
Q Consensus 124 t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~le~~i~~~t~li~ 201 (457)
|+|+|+|+.+++.++. ++||+|+++.+.|+.+...+... |.+++.++.. .++.+|++++++++++++++++
T Consensus 123 t~G~~~al~l~~~~l~----~~Gd~Vlv~~P~y~~y~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~ 195 (430)
T PLN00145 123 TAGCAQAIEIIMSVLA----QPGANILLPRPGYPLYEARAVFS---GLEVRHFDLLPERGWEVDLEGVEALADENTVAMV 195 (430)
T ss_pred eCCHHHHHHHHHHHhc----CCCCEEEEcCCCCccHHHHHHHc---CCEEEEeeCCcccCCcCCHHHHHHHhCcCceEEE
Confidence 9999999999999987 89999999999999987776665 9999998864 4567999999999999999999
Q ss_pred EeccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCC---Cc-cc---CCCCcccEEEeccccccCCCC--ceEEE
Q 040741 202 VMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGK---IP-VD---VEKWNVSLMSLSGHKIYGPKG--VGALY 269 (457)
Q Consensus 202 i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~---~~-~~---~~~~~~Di~~~s~~K~~g~~G--~G~l~ 269 (457)
+++++||||.+++ +++|+++|+++|+++|+|+++.-.. .+ .. +.....-+++.|++|.|+.+| +||++
T Consensus 196 i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv 275 (430)
T PLN00145 196 IINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIA 275 (430)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEE
Confidence 9999999999998 7788999999999999999987321 11 11 122234578889999877666 99999
Q ss_pred Eec-C-CCccc--cccccCCccccccccCCCChhHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeC
Q 040741 270 MRR-R-PRIRV--EPLINGGGQERGIRSGTLPTPLIVGFGSACEI-AKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNG 344 (457)
Q Consensus 270 ~~~-~-~~~~~--~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 344 (457)
+.. + .+... ....... . .....++.....++..+++. ..+.+++..++++++++.+.+.|++ ++++.+..
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~~g~~~~~ 350 (430)
T PLN00145 276 TCDPNGILKETKVVDSIRNY---L-NISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKE-IKCITCPH 350 (430)
T ss_pred EecchhhhhhhHHHHHHHHH---h-cccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCc
Confidence 843 2 22110 0011000 0 00112344445555555543 2334788888999999999999988 77776532
Q ss_pred CCCCcccceEEEEEcc-----c-cchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCC
Q 040741 345 SMERRYIGNLNLSFAY-----V-EGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTT 415 (457)
Q Consensus 345 ~~~~~~~~~~~~~~~~-----~-~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t 415 (457)
.+.. ..++.+.++. . ++.+++..+ ++|.+.+|..+ |. .+++||+++. +
T Consensus 351 ~P~g--a~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~f--------------g~-----~~~lRis~~~--~ 407 (430)
T PLN00145 351 KPEG--SMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSAL--------------GM-----KNWLRITFAI--D 407 (430)
T ss_pred CCCe--eeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCcccc--------------CC-----CCeEEEEeCC--C
Confidence 2322 2333333331 1 344555444 58999988643 21 2799999984 6
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 040741 416 EAEVDRAIELTVKQVEKLRE 435 (457)
Q Consensus 416 ~edid~~~~~l~~~~~~~~~ 435 (457)
.++++..+++|++++++.++
T Consensus 408 ~~~l~~al~rl~~~~~~~~~ 427 (430)
T PLN00145 408 PPSLEDGLERLKSFCLRHAK 427 (430)
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 89999999999999988764
No 64
>PRK07682 hypothetical protein; Validated
Probab=99.96 E-value=1.1e-27 Score=237.59 Aligned_cols=330 Identities=16% Similarity=0.145 Sum_probs=232.1
Q ss_pred CcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh----CC--CCC-cEEEeCChH
Q 040741 57 RPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI----GA--SPK-EIIFTSGAT 128 (457)
Q Consensus 57 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~----g~--~~~-~i~~t~g~T 128 (457)
+.+.|+.+.+. +.++.+.+++.+.+.... .. |.......++++.+++++ |. +++ ++++|+|++
T Consensus 21 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~--Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~ 91 (378)
T PRK07682 21 GVISLGVGEPDFVTPWNVREASIRSLEQGY-------TS--YTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGAS 91 (378)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-------CC--CCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChH
Confidence 45777776665 345667888877664311 00 111123445556666655 43 454 699999999
Q ss_pred HHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC--CCCCCCHHHHHHhcCCCceEEEEeccc
Q 040741 129 ESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG--ADGIVNLDELRAAIRPDTGLISVMAVN 206 (457)
Q Consensus 129 ~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~le~~i~~~t~li~i~~~~ 206 (457)
+|+.+++++++ ++|+.|++.++.|+.+...++.. |.+++.++.+ .++.+|+++++++++++++++++++++
T Consensus 92 ~al~~~~~~l~----~~gd~vl~~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~ 164 (378)
T PRK07682 92 QALDVAMRAII----NPGDEVLIVEPSFVSYAPLVTLA---GGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPN 164 (378)
T ss_pred HHHHHHHHHhC----CCCCEEEEeCCCchhhHHHHHHc---CCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCC
Confidence 99999999988 89999999999999887766655 9999888875 346789999999999899999999999
Q ss_pred cccccccC---hHHHHHHHHhcCCcEEEehhhhcCCCc-----c-cCCC-CcccEEEeccccccCCCC--ceEEEEecCC
Q 040741 207 NEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKIP-----V-DVEK-WNVSLMSLSGHKIYGPKG--VGALYMRRRP 274 (457)
Q Consensus 207 ~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~~-----~-~~~~-~~~Di~~~s~~K~~g~~G--~G~l~~~~~~ 274 (457)
||||.+.+ +++|.++|++|++++++|++|+..... + .... .+..+++.|++|.+|.+| +|+++++++.
T Consensus 165 NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~ 244 (378)
T PRK07682 165 NPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVYF 244 (378)
T ss_pred CCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHHH
Confidence 99999987 788999999999999999998743211 0 1111 134688999999888666 9999998877
Q ss_pred CccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceE
Q 040741 275 RIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNL 354 (457)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 354 (457)
++++..... ....+.+.....++..+++.....+++.+++++++++++.+.|++ + ++.+..+ +. ..++
T Consensus 245 i~~l~~~~~-------~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~-~-~~~~~~p-~g--~~~~ 312 (378)
T PRK07682 245 SEAMLKIHQ-------YSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNE-I-GLTCHVP-GG--AFYA 312 (378)
T ss_pred HHHHHHHHH-------hhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH-C-CCccCCC-Ce--eEEE
Confidence 666654321 111133444444444455432234677888889999999999998 5 6655442 21 1222
Q ss_pred EEEEc--cccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Q 040741 355 NLSFA--YVEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQ 429 (457)
Q Consensus 355 ~~~~~--~~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~ 429 (457)
...+. ..+..++...+ +||.+.+|..|.. ...+++||+++. +.+++++++++|+++
T Consensus 313 ~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~-----------------~~~~~iRis~~~--~~~~l~~~l~~l~~~ 373 (378)
T PRK07682 313 FPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFGE-----------------SGEGFIRCSYAT--SLEQLQEAMKRMKRF 373 (378)
T ss_pred EEeccCCCCCHHHHHHHHHHhCCEEEcCchhhCc-----------------CCCCeEEEEeCC--CHHHHHHHHHHHHHH
Confidence 23332 24556676554 5899998875422 113799999985 689999999999998
Q ss_pred HHHH
Q 040741 430 VEKL 433 (457)
Q Consensus 430 ~~~~ 433 (457)
++++
T Consensus 374 l~~~ 377 (378)
T PRK07682 374 VENK 377 (378)
T ss_pred Hhhc
Confidence 8754
No 65
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.96 E-value=2.8e-27 Score=232.13 Aligned_cols=326 Identities=18% Similarity=0.198 Sum_probs=229.1
Q ss_pred ccccCCCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHH
Q 040741 51 GVRIAGRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATES 130 (457)
Q Consensus 51 ~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a 130 (457)
.++|..+.+ -+-+.+++|++++++|.++...+. ...+...++++.+++++|.+ ++++++|+|+|
T Consensus 9 ~~ina~g~~--t~~g~s~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~~~~a~~~g~~--~~~~~~g~t~a 72 (363)
T TIGR01437 9 KVINASGKM--TILGVSTVSDEVADAQKRGAQNYF------------EIKELVNKTGEYIANLLGVE--DAVIVSSASAG 72 (363)
T ss_pred eEEECCcEe--ecCCCCCCCHHHHHHHHHHHhcCC------------CHHHHHHHHHHHHHHhhCCC--eEEEEcCHHHH
Confidence 345555543 334556799999999999975421 23478899999999999986 48999999999
Q ss_pred HHHHHHHhhhhhcCCCC---------------EEEEcCCCCcchHHH-HHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcC
Q 040741 131 NNVSIKGVMHFYKDKKR---------------HVITTQTEHKCVLDS-CRHLQQEGFEITYLPVGADGIVNLDELRAAIR 194 (457)
Q Consensus 131 ~~~al~~~~~~~~~~g~---------------~vi~~~~~h~~~~~~-~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~ 194 (457)
++++++++. ++|| +||++.+.+..+... ...+...|+++++++. ++.+|+++++++|+
T Consensus 73 l~~al~al~----~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~--~~~~d~~~le~ai~ 146 (363)
T TIGR01437 73 IAQSVAAVI----TRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGY--ANECSAEQLEAAIT 146 (363)
T ss_pred HHHHHHHHh----cCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcC--CCCCCHHHHHHhcC
Confidence 999999997 6777 888877433322101 1122345999999986 35689999999999
Q ss_pred CCceEEE-EeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEecccc-ccCCCCceEEEEec
Q 040741 195 PDTGLIS-VMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHK-IYGPKGVGALYMRR 272 (457)
Q Consensus 195 ~~t~li~-i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K-~~g~~G~G~l~~~~ 272 (457)
++|++++ ++.++|++|.+.|+++|.++|++||+++++|++|+.... .....+.|++++|+|| +.||. .|+++.++
T Consensus 147 ~~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~~--~~~~~g~D~~~~S~~K~l~gp~-~G~l~~~~ 223 (363)
T TIGR01437 147 EKTAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDLQ--KYYRLGADLVIYSGAKAIEGPT-SGLVLGKK 223 (363)
T ss_pred hhceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCchH--HHHHcCCCEEEEeCCcccCCCc-eEEEEEcH
Confidence 9998766 566788999999999999999999999999999973211 1123468999999999 67787 69988876
Q ss_pred CCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCC--cc
Q 040741 273 RPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMER--RY 350 (457)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~ 350 (457)
+.++.+.+...+.+ +.++.++ ..++++.++++.+.+......++..++++++.+.|.+ ++++++..+.+. ..
T Consensus 224 ~~i~~~~~~~~~~~--~~~~~~~---~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~-i~g~~~~~~~~~~~~~ 297 (363)
T TIGR01437 224 KYIEWVKLQSKGIG--RAMKVGK---ENILGLTAALEQYLSTGKESGAEMVAKLTPFIEALNT-LKGVSASIVQDEAGRD 297 (363)
T ss_pred HHHHHHHhccCCCc--ceeccCH---HHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHhc-CCCeEEEEecCCCCCc
Confidence 66555544333221 2233334 3367777888877654344444555667789999999 899988743221 11
Q ss_pred --cceEEEEE--ccccchHHHhccc--C--eEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHH
Q 040741 351 --IGNLNLSF--AYVEGESLLMGLK--E--VAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRA 422 (457)
Q Consensus 351 --~~~~~~~~--~~~~~~~~~~~l~--~--i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~ 422 (457)
...+.+.. .+.++.++...|+ + |.++. + ....+.+|+.+.. ++++|+|.+
T Consensus 298 ~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~--~-------------------~~~~~~~~l~~~~-~~~~e~~~~ 355 (363)
T TIGR01437 298 IARAEIRFDESELGMTAADVVQALRQGEPAIYTRG--Y-------------------KANEGIIEIDPRS-VTGGQLDII 355 (363)
T ss_pred CceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEee--e-------------------eecCCeEEEEeec-CCHHHHHHH
Confidence 12223333 1467788888883 5 44432 1 1123789999886 459999999
Q ss_pred HHHHHHH
Q 040741 423 IELTVKQ 429 (457)
Q Consensus 423 ~~~l~~~ 429 (457)
+++|++.
T Consensus 356 ~~~l~~~ 362 (363)
T TIGR01437 356 VERIREI 362 (363)
T ss_pred HHHHHHh
Confidence 9999875
No 66
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.96 E-value=3.9e-27 Score=235.42 Aligned_cols=332 Identities=16% Similarity=0.158 Sum_probs=232.3
Q ss_pred EecCCCCC----CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHH
Q 040741 60 YLDMQATT----PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSI 135 (457)
Q Consensus 60 ~l~~~~~~----~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al 135 (457)
++++.++. ..+|++.+++.+.+.....++.. ...-+...+.+.++++.+++++|.+ ..++.++|++|+..++
T Consensus 47 ~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~--s~~~~g~~~~~~~Le~~la~~~g~~--~~l~~~sG~~an~~ai 122 (402)
T TIGR01821 47 VTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGG--TRNISGTNIPHVELEAELADLHGKE--SALVFTSGYVANDATL 122 (402)
T ss_pred EEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcc--hhhhhCCcHHHHHHHHHHHHHhCCC--eEEEECchHHHHHHHH
Confidence 45555555 35689999999998764322221 1111222367889999999999964 3777788899999999
Q ss_pred HHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcC---C-CceEEEEecccccccc
Q 040741 136 KGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIR---P-DTGLISVMAVNNEIGV 211 (457)
Q Consensus 136 ~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~---~-~t~li~i~~~~~~~G~ 211 (457)
..+... .+++.|+++..+|.+....+... |.++..++.+ |++++++.++ + ++++|++++++|++|.
T Consensus 123 ~~l~~~--~~~~~v~~~~~~h~s~~~~~~~~---g~~~~~~~~~-----d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~ 192 (402)
T TIGR01821 123 ATLAKI--IPGCVIFSDELNHASMIEGIRHS---GAEKFIFRHN-----DVAHLEKLLQSVDPNRPKIIAFESVYSMDGD 192 (402)
T ss_pred HHhhCC--CCCCEEEEcchHhHHHHHHHHHc---CCeEEEECCC-----CHHHHHHHHHhccCCCCeEEEEcCCCCCCCC
Confidence 887621 26788888888998888877654 8877666543 6777777764 3 5789999999999999
Q ss_pred ccChHHHHHHHHhcCCcEEEehhhhcCCCc-c--c-CC----CCcccEEEeccccccCCCCceEEEEecCCCcccccccc
Q 040741 212 IQPMEEIGQICKEFKIPFHTDAAQALGKIP-V--D-VE----KWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLIN 283 (457)
Q Consensus 212 ~~~l~~i~~l~~~~~v~li~D~a~~~g~~~-~--~-~~----~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~ 283 (457)
+.|+++|.++|++||+++++|++|++|... . . .. ...+|+++.+++|.+|..| |+++++++..+.+.....
T Consensus 193 ~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G-G~i~~~~~~~~~l~~~~~ 271 (402)
T TIGR01821 193 IAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG-GYIAASRKLIDAIRSYAP 271 (402)
T ss_pred ccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC-ceeecCHHHHHHHHHhCc
Confidence 999999999999999999999999865321 1 1 00 1146899999999988876 888887765555443222
Q ss_pred CCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccc-c
Q 040741 284 GGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYV-E 362 (457)
Q Consensus 284 ~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 362 (457)
++ ...++.++..++++.++++.+.+. +...++.+++.+++.+.|++ + ++.+..+. .+++.+.+... .
T Consensus 272 ~~-----~~t~~~~~~~~aaa~aaL~~~~~~-~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~----~~i~~i~~~~~~~ 339 (402)
T TIGR01821 272 GF-----IFTTSLPPAIAAGATASIRHLKES-QDLRRAHQENVKRLKNLLEA-L-GIPVIPNP----SHIVPVIIGDAAL 339 (402)
T ss_pred Cc-----eecCcCCHHHHHHHHHHHHHhhcC-HHHHHHHHHHHHHHHHHHHH-c-CCCcCCCC----CCEEEEEeCCHHH
Confidence 11 122345666677777888877654 55666778899999999988 4 66554432 33444444321 2
Q ss_pred chHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 363 GESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 363 ~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
..++...| +||.+.+....+. ..+..+|||+++..++++|||+++++|+++++++.
T Consensus 340 a~~~~~~L~~~~Gi~v~~~~~p~~----------------~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~~ 398 (402)
T TIGR01821 340 CKKVSDLLLNKHGIYVQPINYPTV----------------PRGTERLRITPTPAHTDKMIDDLVEALLLVWDRLG 398 (402)
T ss_pred HHHHHHHHHhcCCEEEEeECCCCC----------------CCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 34555554 3888876432211 11236899999999999999999999999987653
No 67
>PRK09105 putative aminotransferase; Provisional
Probab=99.96 E-value=5.2e-27 Score=231.26 Aligned_cols=316 Identities=18% Similarity=0.228 Sum_probs=231.0
Q ss_pred CCCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHH
Q 040741 55 AGRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNV 133 (457)
Q Consensus 55 ~~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~ 133 (457)
..+.++|+.+.+. ++++.+++++.+...... .|++. ...++++.+++++|+++++|++|+|+++++.+
T Consensus 42 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~--------~Y~~~---~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~ 110 (370)
T PRK09105 42 AEGAVFLNANECPLGPSPAARDAAARSAALSG--------RYDLE---LEDDLRTLFAAQEGLPADHVMAYAGSSEPLNY 110 (370)
T ss_pred CCCcEEecCCCCCCCCCHHHHHHHHHHHHHhc--------CCCCc---hHHHHHHHHHHHhCcChhhEEEcCChHHHHHH
Confidence 3677999999887 678999999988764321 12211 26789999999999999999999999999999
Q ss_pred HHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEecccccccccc
Q 040741 134 SIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQ 213 (457)
Q Consensus 134 al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~ 213 (457)
++.++. ++|+.|+++.++|+.+...++.. |.+++.++.+.++.+|++++++. .++++++++++++||||.+.
T Consensus 111 ~~~~l~----~~gd~Vli~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~ 182 (370)
T PRK09105 111 AVLAFT----SPTAGLVTADPTYEAGWRAADAQ---GAPVAKVPLRADGAHDVKAMLAA-DPNAGLIYICNPNNPTGTVT 182 (370)
T ss_pred HHHHHc----CCCCEEEEeCCChHHHHHHHHHc---CCeEEEecCCCCCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCc
Confidence 999988 89999999999999998776665 99999999887778999999887 56789999999999999999
Q ss_pred ChHHHHHHHHh--cCCcEEEehhhhc-CCCc--ccCCCCccc-EEEeccccccCCCC--ceEEEEecCCCccccccccCC
Q 040741 214 PMEEIGQICKE--FKIPFHTDAAQAL-GKIP--VDVEKWNVS-LMSLSGHKIYGPKG--VGALYMRRRPRIRVEPLINGG 285 (457)
Q Consensus 214 ~l~~i~~l~~~--~~v~li~D~a~~~-g~~~--~~~~~~~~D-i~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~ 285 (457)
+.+++.++++. +++++++|++|.. ...+ .++.....+ +++.|++|.||.+| +|+++++++.++++... +.
T Consensus 183 ~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~~l~~~--~~ 260 (370)
T PRK09105 183 PRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARF--GH 260 (370)
T ss_pred CHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHHHHHHHhc--CC
Confidence 98888777654 4899999999952 1111 111111223 66679999999777 99999987766665543 11
Q ss_pred ccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchH
Q 040741 286 GQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGES 365 (457)
Q Consensus 286 ~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (457)
...+.....+...++.. .+.+++..++++++++++.+.|++ + ++.+..+ + .+++.+.++ .+..+
T Consensus 261 --------~~~~~~~~~aa~~~L~~-~~~~~~~~~~~~~~r~~l~~~L~~-~-g~~~~~~-~---~~f~~~~~~-~~~~~ 324 (370)
T PRK09105 261 --------NPLPVPAAAAGLASLRD-PKLVPQRRAENAAVREDTIAWLKK-K-GYKCTPS-Q---ANCFMVDVK-RPAKA 324 (370)
T ss_pred --------CCcCHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHHH-C-CCCcCCC-C---CcEEEEeCC-CCHHH
Confidence 13444444444444532 234677778888999999999988 4 6655432 1 333333333 34566
Q ss_pred HHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHH
Q 040741 366 LLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 366 ~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~ 430 (457)
+...| +||.+ |..+. ...+++||+++ +++++++++++|++.+
T Consensus 325 l~~~L~~~gI~v--~~~~~------------------~~~~~~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 325 VADAMAKQGVFI--GRSWP------------------IWPNWVRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred HHHHHHHCCcEE--ecCCC------------------CCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 66666 68777 22121 01279999988 4788999999988764
No 68
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.96 E-value=3.1e-27 Score=235.76 Aligned_cols=326 Identities=14% Similarity=0.136 Sum_probs=230.1
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhC------CCC-CcEEEeCCh
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIG------ASP-KEIIFTSGA 127 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g------~~~-~~i~~t~g~ 127 (457)
.+.+.|+.+.+. +.++.+.+++.+.+.... .++|. .....++++.++++++ +++ +++++|+|+
T Consensus 32 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~--------~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~ 102 (399)
T PRK07681 32 HKMIDLSIGNPDMPPADFVREEMVHTANQKE--------SYGYT-LSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGS 102 (399)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhccc--------cCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCc
Confidence 455677666555 467788888887764311 11111 1234456666666653 466 689999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCC--CCCCHHHHHHhcCCCceEEEEecc
Q 040741 128 TESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGAD--GIVNLDELRAAIRPDTGLISVMAV 205 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~--~~~d~~~le~~i~~~t~li~i~~~ 205 (457)
++++.+++.+++ ++||.|+++.+.|+.+...++.. |.+++.++.+.+ ..+|++++++++.+++++|+++++
T Consensus 103 ~~al~~~~~~~~----~~Gd~Vlv~~P~y~~~~~~~~~~---G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P 175 (399)
T PRK07681 103 QDGLVHLPMVYA----NPGDIILVPDPGYTAYETGIQMA---GATSYYMPLKKENDFLPDLELIPEEIADKAKMMILNFP 175 (399)
T ss_pred HHHHHHHHHHhC----CCCCEEEECCCCccchHHHHHhc---CCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCC
Confidence 999999999888 89999999999999998877666 999999998743 357999999999889999999999
Q ss_pred ccccccccC---hHHHHHHHHhcCCcEEEehhhhcCCC----ccc---CC-CCcccEEEeccccccCCCC--ceEEEEec
Q 040741 206 NNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKI----PVD---VE-KWNVSLMSLSGHKIYGPKG--VGALYMRR 272 (457)
Q Consensus 206 ~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~----~~~---~~-~~~~Di~~~s~~K~~g~~G--~G~l~~~~ 272 (457)
+||||.+.+ +++|+++|++||++||+|++|+-... ... .. ..+..+++.|++|.+|.+| +||+++++
T Consensus 176 ~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~ 255 (399)
T PRK07681 176 GNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNE 255 (399)
T ss_pred CCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecCH
Confidence 999999999 77788899999999999999973211 111 11 1234578889999888766 99999887
Q ss_pred CCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccc
Q 040741 273 RPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIG 352 (457)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 352 (457)
+.++++...... ...+.+.....++..+++.....+++..+.++++++.+.+.|++ . ++.+..+. . +.
T Consensus 256 ~l~~~~~~~~~~-------~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~p~-~--g~ 323 (399)
T PRK07681 256 EIVRALTQFKSN-------TDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRT-F-GWNVDKPA-G--SM 323 (399)
T ss_pred HHHHHHHHHHhh-------cccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH-C-CCcccCCC-e--ee
Confidence 766665443321 11134444444444455433334667777888889999999988 5 66654322 1 33
Q ss_pred eEEEEEc-cccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHH
Q 040741 353 NLNLSFA-YVEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVK 428 (457)
Q Consensus 353 ~~~~~~~-~~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~ 428 (457)
++.+.++ ..+..++...+ +||.+.+|..|.. ...+++||+++. +.+++++++++|++
T Consensus 324 f~~~~l~~~~~~~~~~~~l~~~~gv~v~pg~~f~~-----------------~~~~~iRis~~~--~~~~~~~~l~~l~~ 384 (399)
T PRK07681 324 FVWAEIPKGWTSLSFAYALMDRANVVVTPGHAFGP-----------------HGEGFVRIALVQ--DEEVLQQAVENIRN 384 (399)
T ss_pred EEEEECCCCCCHHHHHHHHHHhCCEEEeCChhhCc-----------------CCCCeEEEEecC--CHHHHHHHHHHHHH
Confidence 4444444 23455565555 5899998865421 112799999983 68999999999987
No 69
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=4.8e-27 Score=232.48 Aligned_cols=316 Identities=17% Similarity=0.114 Sum_probs=231.1
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHH
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVS 134 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~a 134 (457)
.+.++|+.+.+. ++++.+.+++.+... . +.|+. ....++++.+++++|++++++++|+|+++++.++
T Consensus 52 ~~~i~l~~n~~p~~~~~~v~~a~~~~~~-~--------~~Yp~---~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~ 119 (380)
T PLN03026 52 EDIVKLDANENPYGPPPEVLEALGNMKF-P--------YVYPD---PESRRLRAALAEDSGLESENILVGCGADELIDLL 119 (380)
T ss_pred cceEEccCCCCCCCCCHHHHHHHHhhHh-h--------ccCCC---CCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHH
Confidence 467899988766 677888888865311 0 11111 1246799999999999999999999999999999
Q ss_pred HHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhc-CCCceEEEEecccccccccc
Q 040741 135 IKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAI-RPDTGLISVMAVNNEIGVIQ 213 (457)
Q Consensus 135 l~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i-~~~t~li~i~~~~~~~G~~~ 213 (457)
+.++. ++|++|+++.+.|..+...++.. |++++.++.+.++.+|++++++++ ++++++|++++++||||.+.
T Consensus 120 ~~~~~----~~gd~Vlv~~P~y~~y~~~~~~~---g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~ 192 (380)
T PLN03026 120 MRCVL----DPGDKIIDCPPTFGMYVFDAAVN---GAEVIKVPRTPDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSII 192 (380)
T ss_pred HHHhc----CCCCEEEEcCCChHHHHHHHHHc---CCEEEEeecCCCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCC
Confidence 99887 89999999999987666555544 999999998777789999999999 78899999999999999999
Q ss_pred ChHHHHHHHHhcCCcEEEehhhhcCCC---cc-cCCCCcccEEEeccccccCCCC--ceEEEEecCCCccccccccCCcc
Q 040741 214 PMEEIGQICKEFKIPFHTDAAQALGKI---PV-DVEKWNVSLMSLSGHKIYGPKG--VGALYMRRRPRIRVEPLINGGGQ 287 (457)
Q Consensus 214 ~l~~i~~l~~~~~v~li~D~a~~~g~~---~~-~~~~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~~ 287 (457)
+.+++.++++.. +++++|++|.-... .. .+...+..+++.|++|.||.+| +|+++++++.++++......
T Consensus 193 ~~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~~~i~~l~~~~~~--- 268 (380)
T PLN03026 193 SDDDLLKILELP-ILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--- 268 (380)
T ss_pred CHHHHHHHHhcC-CEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCHHHHHHHHHhcCC---
Confidence 999999999865 99999999863211 11 1222345688999999888766 89999987666555433321
Q ss_pred ccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEc-cccchHH
Q 040741 288 ERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFA-YVEGESL 366 (457)
Q Consensus 288 ~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 366 (457)
...+.....++.++++. .+.+++..+++++.++++.+.|++ ++++.+..+ . .+++.+.++ ..+...+
T Consensus 269 ------~~~~~~~q~aa~~aL~~-~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~p~--~--~~f~~~~~~~~~~~~~~ 336 (380)
T PLN03026 269 ------YNVSVAAEVAACAALSN-PKYLEDVKNALVEERERLFGLLKE-VPFLEPYPS--D--ANFILCRVTSGRDAKKL 336 (380)
T ss_pred ------CCCCHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHHHH-CCCCeECCC--C--CeEEEEECCCCCCHHHH
Confidence 13444555555555543 234677788888899999999998 765554321 1 445555554 2345666
Q ss_pred Hhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHH
Q 040741 367 LMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVK 428 (457)
Q Consensus 367 ~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~ 428 (457)
...| +||.++.+.. ....+++||+++ +.+++++++++|++
T Consensus 337 ~~~l~~~gI~v~~~~~-------------------~~~~~~lRis~~---~~~~~~~l~~al~~ 378 (380)
T PLN03026 337 KEDLAKMGVMVRHYNS-------------------KELKGYIRVSVG---KPEHTDALMEALKQ 378 (380)
T ss_pred HHHHHHCCeEEEECCC-------------------CCCCCEEEEecC---CHHHHHHHHHHHHH
Confidence 6666 6898876532 012379999998 47899999998875
No 70
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1e-26 Score=232.30 Aligned_cols=334 Identities=17% Similarity=0.203 Sum_probs=233.1
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh-----CCCCCcEEEeCChHH
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI-----GASPKEIIFTSGATE 129 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~-----g~~~~~i~~t~g~T~ 129 (457)
.+.++|+.+.+. +.++.+.+++.+.......+ .......++++.+++++ +++++++++|+|+|+
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y----------~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~ 99 (397)
T PRK07568 30 IKVYHLNIGQPDIKTPEVFFEAIKNYDEEVLAY----------SHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSE 99 (397)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHhcCCcCc----------CCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHH
Confidence 356889988876 57888888887765322211 11134567788888877 467888999999999
Q ss_pred HHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC-CCC-C-CCHHHHHHhcCCCceEEEEeccc
Q 040741 130 SNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG-ADG-I-VNLDELRAAIRPDTGLISVMAVN 206 (457)
Q Consensus 130 a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~-~~~-~-~d~~~le~~i~~~t~li~i~~~~ 206 (457)
|+.+++.++. ++|++|+++.+.|..+...++. .|.+++.++.+ .++ . .|++++++++++++++|++++++
T Consensus 100 al~~~~~~l~----~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~p~ 172 (397)
T PRK07568 100 AILFAMMAIC----DPGDEILVPEPFYANYNGFATS---AGVKIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNPG 172 (397)
T ss_pred HHHHHHHHhc----CCCCEEEEecCCCccHHHHHHH---cCCEEEEeecCcccCCCCCCHHHHHHhcCccceEEEEECCC
Confidence 9999999887 8999999999988877665544 49999999986 333 2 36799999999999999999999
Q ss_pred cccccccC---hHHHHHHHHhcCCcEEEehhhhcCC----Cc---ccCCC-CcccEEEeccccccCCCC--ceEEEEec-
Q 040741 207 NEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGK----IP---VDVEK-WNVSLMSLSGHKIYGPKG--VGALYMRR- 272 (457)
Q Consensus 207 ~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~----~~---~~~~~-~~~Di~~~s~~K~~g~~G--~G~l~~~~- 272 (457)
||+|.+.+ +++|+++|+++|+++++|++++... .. ..... .+..+++.|++|.+|.+| +|+++.++
T Consensus 173 NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~ 252 (397)
T PRK07568 173 NPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNK 252 (397)
T ss_pred CCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCH
Confidence 99999987 7789999999999999999986321 11 11211 123478889999777544 89998753
Q ss_pred CCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccc
Q 040741 273 RPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIG 352 (457)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 352 (457)
+.++++...... ..+.+.....++..+++.....+++..+.++++++.+.+.|++ ++++.+..+ +. +.
T Consensus 253 ~~~~~~~~~~~~--------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~p-~g--~~ 320 (397)
T PRK07568 253 ELIAAAMKLCQA--------RLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNK-IPGVVCEKP-KG--AF 320 (397)
T ss_pred HHHHHHHHHhhc--------cCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhc-CCCceecCC-Cc--ce
Confidence 444333222111 0133444445555555433345778888899999999999988 777665433 21 22
Q ss_pred eEEEEEccccchHHHhcc--------cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHH
Q 040741 353 NLNLSFAYVEGESLLMGL--------KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIE 424 (457)
Q Consensus 353 ~~~~~~~~~~~~~~~~~l--------~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~ 424 (457)
++.+.++..+..++...+ +||.+.+|..+.. .+...+++|||+++. +.++++.+++
T Consensus 321 ~~~~~l~~~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~--------------~~~~~~~~iRls~~~--~~~~~~~~~~ 384 (397)
T PRK07568 321 YIIAKLPVDDAEDFAKWLLTDFNYNGETVMVAPASGFYA--------------TPGLGKNEIRIAYVL--NEEDLKRAME 384 (397)
T ss_pred EEEEecCCCCHHHHHHHHHhhcccccceEEEeCchHhcC--------------CCCCCCCeEEEEEeC--CHHHHHHHHH
Confidence 334455433445555544 4799988865421 112223799999974 5799999999
Q ss_pred HHHHHHHHHH
Q 040741 425 LTVKQVEKLR 434 (457)
Q Consensus 425 ~l~~~~~~~~ 434 (457)
+|.++++++.
T Consensus 385 ~l~~~l~~~~ 394 (397)
T PRK07568 385 ILKEALEKYN 394 (397)
T ss_pred HHHHHHHHhh
Confidence 9999987654
No 71
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=2.9e-27 Score=233.17 Aligned_cols=318 Identities=17% Similarity=0.150 Sum_probs=224.1
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEE-eCChHHHHHH
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIF-TSGATESNNV 133 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~-t~g~T~a~~~ 133 (457)
++.++|+.+.+. .+++.+.+++.+.......+|.. ...++++.+++++|++++++++ ++|+++++.+
T Consensus 34 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~-----------~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~ 102 (361)
T PRK00950 34 ESIIKLGSNENPLGPSPKAVEAIEKELSKIHRYPEP-----------DAPELREALSKYTGVPVENIIVGGDGMDEVIDT 102 (361)
T ss_pred cceEEccCCCCCCCCCHHHHHHHHHHHHhhcCCCCC-----------CHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHH
Confidence 366788766544 57788999998877643323221 2378999999999999888999 6788889999
Q ss_pred HHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEecccccccccc
Q 040741 134 SIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQ 213 (457)
Q Consensus 134 al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~ 213 (457)
+++++. ++|++|+++.+.|..+...++.. |++++.++.+.++.+|+++++++++++++++++++++||+|.+.
T Consensus 103 ~~~~~~----~~gd~vlv~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~ 175 (361)
T PRK00950 103 LMRTFI----DPGDEVIIPTPTFSYYEISAKAH---GAKPVYAKREEDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLI 175 (361)
T ss_pred HHHHhc----CCCCEEEEcCCChHHHHHHHHHc---CCEEEEeecCCCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCc
Confidence 888887 89999999998887776655444 99999999777778999999999988899999999999999999
Q ss_pred ChHHHHHHHHhcCCcEEEehhhhcCCC-c-cc-CCCCcccEEEeccccccCCCC--ceEEEEecCCCccccccccCCccc
Q 040741 214 PMEEIGQICKEFKIPFHTDAAQALGKI-P-VD-VEKWNVSLMSLSGHKIYGPKG--VGALYMRRRPRIRVEPLINGGGQE 288 (457)
Q Consensus 214 ~l~~i~~l~~~~~v~li~D~a~~~g~~-~-~~-~~~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~ 288 (457)
|.+++.++|+++|+++|+|++|+.... . .. ....+.-+++.|++|.+|.+| +|+++++++.+..+......
T Consensus 176 ~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~---- 251 (361)
T PRK00950 176 PEEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLIDYYMRAKTP---- 251 (361)
T ss_pred CHHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCHHHHHHHHHhcCC----
Confidence 999999999999999999999964321 0 01 112223477889999888666 89999887655544432211
Q ss_pred cccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHHh
Q 040741 289 RGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLM 368 (457)
Q Consensus 289 ~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (457)
...+.....++..+++. .+.+++..++.+++++++.+.|. +.+.. .. .+++.+.+...+..++..
T Consensus 252 -----~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~r~~l~~~l~-----~~~~~-~~---~~~i~~~~~~~~~~~~~~ 316 (361)
T PRK00950 252 -----FSLTRLSQAAAIAALSD-KEYIEKSIEHGIKSREYLYNELP-----FKVYP-SE---ANFVLVDVTPMTAKEFCE 316 (361)
T ss_pred -----CCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHhhcC-----eeECC-Cc---ceEEEEECCCCCHHHHHH
Confidence 12333344433334431 12245555566666665555442 33332 11 344555555455677776
Q ss_pred cc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHH
Q 040741 369 GL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 369 ~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~ 430 (457)
.| +||.+.+|..+. ....++|||+++ +.+++++++++|++++
T Consensus 317 ~l~~~gv~v~~~~~f~-----------------~~~~~~lRis~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 317 ELLKRGVIVRDCTSFR-----------------GLGDYYIRVSIG---TFEENERFLEILKEIV 360 (361)
T ss_pred HHHHCCEEEeeCCccC-----------------CCCCCeEEEECC---CHHHHHHHHHHHHHHh
Confidence 66 689888765321 112379999998 5789999999998865
No 72
>PLN02187 rooty/superroot1
Probab=99.96 E-value=7e-27 Score=236.06 Aligned_cols=341 Identities=15% Similarity=0.183 Sum_probs=237.4
Q ss_pred CCCcEEecCCCCC-----CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh------CCCCCcEEE
Q 040741 55 AGRPLYLDMQATT-----PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI------GASPKEIIF 123 (457)
Q Consensus 55 ~~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~------g~~~~~i~~ 123 (457)
..+.++|..+.+. +.++++.+++.+.+.....+ +|.......++|+.+++++ ++++++|++
T Consensus 65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~--------~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~i 136 (462)
T PLN02187 65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGN--------SYGPGAGILPARRAVADYMNRDLPHKLTPEDIFL 136 (462)
T ss_pred CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCC--------CCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEE
Confidence 3567888887554 34578889988877632111 1111234566788888877 357889999
Q ss_pred eCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC--CCCCCCHHHHHHhcCCCceEEE
Q 040741 124 TSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG--ADGIVNLDELRAAIRPDTGLIS 201 (457)
Q Consensus 124 t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~le~~i~~~t~li~ 201 (457)
|+|+++|+.+++.++. ++||.|+++.+.|+.+...++.. |.+++.++.. .++.+|++++++++++++++++
T Consensus 137 t~G~~~al~~~~~~l~----~pGd~Vlv~~P~y~~y~~~~~~~---g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~~~v~ 209 (462)
T PLN02187 137 TAGCNQGIEIVFESLA----RPNANILLPRPGFPHYDARAAYS---GLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMV 209 (462)
T ss_pred eCCHHHHHHHHHHHhc----CCCCEEEEeCCCCccHHHHHHHc---CCEEEEEeCccccCCccCHHHHHHhcCCCcEEEE
Confidence 9999999999999998 89999999999999987666555 9999999874 4568999999999999999999
Q ss_pred EeccccccccccC---hHHHHHHHHhcCCcEEEehhhhc---CCCcc-cCCC---CcccEEEeccccccCCCC--ceEEE
Q 040741 202 VMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQAL---GKIPV-DVEK---WNVSLMSLSGHKIYGPKG--VGALY 269 (457)
Q Consensus 202 i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~---g~~~~-~~~~---~~~Di~~~s~~K~~g~~G--~G~l~ 269 (457)
+++++||||.+.+ +++|+++|++||++||+|++|+- +..+. .+.. ...-+++.|++|.|+.+| +||++
T Consensus 210 i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v 289 (462)
T PLN02187 210 VINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIA 289 (462)
T ss_pred EeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeEEEE
Confidence 9999999999998 77899999999999999999974 21111 1111 112477889999887666 99999
Q ss_pred Eec-CCC----ccccccccCCccccccccCCCChhHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEe
Q 040741 270 MRR-RPR----IRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEI-AKKEMDYDHKRITALHDRLLNGIKEKLDGVVVN 343 (457)
Q Consensus 270 ~~~-~~~----~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 343 (457)
+.+ +.+ +.+........ ....++.....++.++++. ..+.+++.++.++++++++.+.|++ +++....
T Consensus 290 ~~~p~~~~~~~~~~~~~~~~~~-----~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~-~~~~~~~ 363 (462)
T PLN02187 290 LNDPEGVFETTKVLQSIKQNLD-----VTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKD-IPCVVCP 363 (462)
T ss_pred ecCchhHHHHHHHHHHHHHhcc-----ccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhh-CCCCcCC
Confidence 853 211 12222111100 0112345555555555542 2345788888899999999999998 7654332
Q ss_pred CCCCCcccceEEEEEcc-----c-cchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCC
Q 040741 344 GSMERRYIGNLNLSFAY-----V-EGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFT 414 (457)
Q Consensus 344 ~~~~~~~~~~~~~~~~~-----~-~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~ 414 (457)
..+.. ..++.+.+.. . +..++...+ +||.+.+|..+ |. .++|||+++.
T Consensus 364 ~~P~g--g~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~f--------------g~-----~~~iRis~~~-- 420 (462)
T PLN02187 364 KKPES--CTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDAL--------------GL-----KNWMRITIGV-- 420 (462)
T ss_pred CCCCE--eEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECcccc--------------CC-----CCeEEEEeCC--
Confidence 22221 2333333321 1 233444333 69999988644 21 2799999985
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcChh
Q 040741 415 TEAEVDRAIELTVKQVEKLREMSPL 439 (457)
Q Consensus 415 t~edid~~~~~l~~~~~~~~~~~~~ 439 (457)
++++++..+++|.++++++.+....
T Consensus 421 ~~e~l~~al~rL~~~l~~~~~~~~~ 445 (462)
T PLN02187 421 EAHMLEDALERLKGFCTRHAKKTET 445 (462)
T ss_pred CHHHHHHHHHHHHHHHHHhhhcccc
Confidence 5899999999999999877655433
No 73
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=6.2e-27 Score=230.60 Aligned_cols=315 Identities=18% Similarity=0.162 Sum_probs=231.5
Q ss_pred CcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHH
Q 040741 57 RPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSI 135 (457)
Q Consensus 57 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al 135 (457)
..+.|+.+.+. ..++.+.+++.+.+......|. ....++++.++++++++++++++|+|+++++.+++
T Consensus 30 ~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~~~p~-----------~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~ 98 (359)
T PRK03158 30 KIVKLASNENPYGPSPKVKEAIAAHLDELALYPD-----------GYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMIS 98 (359)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCC-----------CcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHH
Confidence 45677665554 4678899999887654211111 24678999999999998889999999999999999
Q ss_pred HHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccCh
Q 040741 136 KGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPM 215 (457)
Q Consensus 136 ~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l 215 (457)
.++. ++|+.|++..++|+.+...+... |.++..++.+ ++.+|+++++++++++++++++++++||||.+.|.
T Consensus 99 ~~~~----~~gd~v~~~~p~y~~~~~~~~~~---g~~~~~~~~~-~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~ 170 (359)
T PRK03158 99 RALL----NPGTNTVMAEPTFSQYRHNAIIE---GAEVREVPLK-DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNH 170 (359)
T ss_pred HHHh----CCCCEEEEcCCCHHHHHHHHHHc---CCeEEEEecC-CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCH
Confidence 8887 89999999999998877665554 9999999987 66789999999999899999999999999999999
Q ss_pred HHHHHHHHh--cCCcEEEehhhhcCCC----cc--c-CCCCcccEEEeccccccCCCC--ceEEEEecCCCccccccccC
Q 040741 216 EEIGQICKE--FKIPFHTDAAQALGKI----PV--D-VEKWNVSLMSLSGHKIYGPKG--VGALYMRRRPRIRVEPLING 284 (457)
Q Consensus 216 ~~i~~l~~~--~~v~li~D~a~~~g~~----~~--~-~~~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~ 284 (457)
+++.++++. +|+++++|++|..... +. . ....+..+++.|++|.+|.+| +|+++++++.++++......
T Consensus 171 ~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~~ 250 (359)
T PRK03158 171 EELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEELIEKLNIARPP 250 (359)
T ss_pred HHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCHHHHHHHHHhcCC
Confidence 999888887 5999999999964321 11 0 112345688899999888666 69999988766665443211
Q ss_pred CccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccch
Q 040741 285 GGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGE 364 (457)
Q Consensus 285 ~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (457)
...+.....++..+++. .+.+++..+..++.++++.+.|.+ . ++.+..+ . +.++.+.+. .+..
T Consensus 251 ---------~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~~~-~---g~~i~~~~~-~~~~ 313 (359)
T PRK03158 251 ---------FNTTRIAQYAAIAALED-QAFLKECVEKNAEGLEQYYAFCKE-Y-GLFYYPS-Q---TNFIFVDTG-RDAN 313 (359)
T ss_pred ---------CCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHH-C-CCeeCCC-c---CcEEEEECC-CCHH
Confidence 13455555555555532 123556666777888888888888 5 6655432 1 334444443 3456
Q ss_pred HHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Q 040741 365 SLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQ 429 (457)
Q Consensus 365 ~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~ 429 (457)
++...| +||.+.+|..+. . .++|||+++ +.+++++++++|+++
T Consensus 314 ~~~~~l~~~gv~v~~g~~f~--------------~-----~~~iRi~~~---~~~~~~~l~~al~~~ 358 (359)
T PRK03158 314 ELFEALLKKGYIVRSGAALG--------------F-----PTGVRITIG---LKEQNDKIIELLKEL 358 (359)
T ss_pred HHHHHHHHCCeEEeeCCCCC--------------C-----CCeEEEecC---CHHHHHHHHHHHHHh
Confidence 666665 699999886431 1 279999988 589999999999875
No 74
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.96 E-value=2.9e-28 Score=217.10 Aligned_cols=323 Identities=21% Similarity=0.263 Sum_probs=233.8
Q ss_pred CCCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHH
Q 040741 55 AGRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVS 134 (457)
Q Consensus 55 ~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~a 134 (457)
....+.|..+..+.+.+++.++|.+.... ...||. ++...++|+.+|+++|.++ .+|++|||++|.++
T Consensus 20 ~~~~vDLRSDTvT~PTdeMr~am~eA~vg--------DdVyGe--D~tt~rLE~~vA~l~GKEA--gLFv~SGTmgNlla 87 (384)
T KOG1368|consen 20 THRSVDLRSDTVTVPTDEMRRAMAEASVG--------DDVYGE--DPTTNRLEQRVAELFGKEA--GLFVPSGTMGNLLA 87 (384)
T ss_pred eeeccccccccccCChHHHHHHHhhcccC--------cccccC--CccHHHHHHHHHHHhCccc--eeeecccccccHHH
Confidence 35567888888888999999999988643 122233 3578899999999999887 99999999999999
Q ss_pred HHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC--------CceEEEEeccc
Q 040741 135 IKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP--------DTGLISVMAVN 206 (457)
Q Consensus 135 l~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~--------~t~li~i~~~~ 206 (457)
++..+. ++|.+||+.+..|...+++.......|+.++.+..+.+|.+|++++|++|+. -|++||+++.+
T Consensus 88 Im~Hc~---~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~ 164 (384)
T KOG1368|consen 88 IMVHCH---QRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTH 164 (384)
T ss_pred HHHHhc---CCCceEEeccchheeehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccc
Confidence 999996 7999999999999999998888777899999999999999999999999973 37999999999
Q ss_pred cccc-cccChH---HHHHHHHhcCCcEEEehhhhcCCC---cccCCCC--cccEEEeccccccC-CCCceEEEEecCCCc
Q 040741 207 NEIG-VIQPME---EIGQICKEFKIPFHTDAAQALGKI---PVDVEKW--NVSLMSLSGHKIYG-PKGVGALYMRRRPRI 276 (457)
Q Consensus 207 ~~~G-~~~~l~---~i~~l~~~~~v~li~D~a~~~g~~---~~~~~~~--~~Di~~~s~~K~~g-~~G~G~l~~~~~~~~ 276 (457)
+.+| .++|++ +|.++|+++|+.+|+|+|.-+.+. ...+.++ .+|.++.|++|..| |-| .+++++++.+.
T Consensus 165 ~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAPVG-SViVG~k~FI~ 243 (384)
T KOG1368|consen 165 NNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAPVG-SVIVGSKDFID 243 (384)
T ss_pred cccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCCcc-cEEEccHHHHH
Confidence 9987 888855 688899999999999999865321 2223333 47999999999555 554 56666665555
Q ss_pred ccccc--ccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceE
Q 040741 277 RVEPL--INGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNL 354 (457)
Q Consensus 277 ~~~~~--~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 354 (457)
+.+.. ..|||. ..+..++++...++..-...+....++.+ .+.+.+.. .+++.+..+... .+++
T Consensus 244 kA~~~RKalGGGm-------RQsGvLaaaaLval~~~~~~L~~dHk~A~----~lAe~~~~-~~~i~v~v~a~e--tNiv 309 (384)
T KOG1368|consen 244 KARHFRKALGGGM-------RQSGVLAAAALVALDENVPLLRADHKRAK----ELAEYINT-PEEIRVEVPAVE--TNIV 309 (384)
T ss_pred HHHHHHHHhcCch-------hHHHHHHHHHHHHhhcchHHHHHHHHHHH----HHHHHhcc-ccceeeecchhh--ccee
Confidence 44322 223332 12222333333333322223444444444 44455555 566777554222 2333
Q ss_pred E--EEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHH
Q 040741 355 N--LSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 355 ~--~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~ 430 (457)
+ +.-+..+.+.+...+ .||.+..|.. .++|+.+.+-+|.+++++++.++.+.+
T Consensus 310 ~~~l~q~~~~~~~l~~~~~k~gi~lm~~~s-----------------------~r~Rivlh~Qvt~~~ve~~~~~~~k~~ 366 (384)
T KOG1368|consen 310 NMVLCQARLTAEELCKFLEKNGILLMGGAS-----------------------RRIRIVLHHQVTDEDVEYVKSVLSKKF 366 (384)
T ss_pred eeecccccCCHHHHHHHHHHCCeEEeeccc-----------------------cceEEEEEEecCHHHHHHHHHHHHHHH
Confidence 3 333567788888888 5777765531 679999999999999999999995444
No 75
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=6.2e-27 Score=230.16 Aligned_cols=319 Identities=17% Similarity=0.207 Sum_probs=231.6
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhc-cCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHH
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSR-YGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNV 133 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~ 133 (457)
++.++|+.+.+. ++++.+.+++.+.+... ..+|. ....++++.++++++++++++++|+|+++++.+
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~y~~-----------~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~ 92 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALGDDLRLYPD-----------PNADALRQAIAAYYGLDPEQVFVGNGSDEVLAH 92 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhhhhhhcCCC-----------CcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHH
Confidence 467899888877 46789999998876531 11111 123689999999999999999999999999999
Q ss_pred HHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEecccccccccc
Q 040741 134 SIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQ 213 (457)
Q Consensus 134 al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~ 213 (457)
++.++. ++||+|+++.+.|+.+...++.. |.+++.++.+.++.+|++++++ .++++++++++||||.+.
T Consensus 93 ~~~~l~----~~gd~vlv~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~d~~~l~~----~~~~v~~~~P~NPtG~~~ 161 (353)
T PRK05387 93 AFLAFF----NHDRPLLFPDITYSFYPVYAGLY---GIPYEEIPLDDDFSIDVEDYLR----PNGGIIFPNPNAPTGIAL 161 (353)
T ss_pred HHHHhc----CCCCEEEEeCCCHHHHHHHHHHc---CCEEEEeecCCCCCCCHHHHHh----cCCEEEEeCCCCCCCCCC
Confidence 999998 89999999999997776655544 9999999988778899999874 457889999999999999
Q ss_pred ChHHHHHHHHhc-CCcEEEehhhhc-CCCc-cc-CCCCcccEEEeccccccCCCC--ceEEEEecCCCccccccccCCcc
Q 040741 214 PMEEIGQICKEF-KIPFHTDAAQAL-GKIP-VD-VEKWNVSLMSLSGHKIYGPKG--VGALYMRRRPRIRVEPLINGGGQ 287 (457)
Q Consensus 214 ~l~~i~~l~~~~-~v~li~D~a~~~-g~~~-~~-~~~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~~ 287 (457)
|.+++.++++.+ ++++++|++|.- +... .. ....+..+++.|++|.+|.+| +|+++.+++.++++......
T Consensus 162 ~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~~~--- 238 (353)
T PRK05387 162 PLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELIEALNRVKNS--- 238 (353)
T ss_pred CHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecCHHHHHHHHHhhcc---
Confidence 999999999876 999999999852 1111 11 112244689999999877555 99999887766655443211
Q ss_pred ccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHH
Q 040741 288 ERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLL 367 (457)
Q Consensus 288 ~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (457)
....+.+.....++..++.. .+.+++..++++++++++.+.|++ + ++.+..+ . .+++.+.++..+..++.
T Consensus 239 ---~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~--~--~~~~~~~~~~~~~~~~~ 308 (353)
T PRK05387 239 ---FNSYPLDRLAQAGAIAAIED-EAYFEETRAKVIATRERLVEELEA-L-GFEVLPS--K--ANFVFARHPSHDAAELA 308 (353)
T ss_pred ---CCCCCcCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHH-C-CCeECCC--c--CcEEEEECCCCCHHHHH
Confidence 11224555555555555532 234677788888999999999998 5 6665432 1 34445555544556677
Q ss_pred hcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 368 MGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 368 ~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
+.| +||.+.. +.. ....+++||+++ +.+++++++++|++++.
T Consensus 309 ~~l~~~gi~v~~---~~~----------------~~~~~~iRis~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 309 AKLRERGIIVRH---FNK----------------PRIDQFLRITIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred HHHHHCCEEEEE---CCC----------------CCCCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 666 6888752 110 012379999997 57999999999988754
No 76
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.96 E-value=1.7e-26 Score=207.06 Aligned_cols=338 Identities=14% Similarity=0.188 Sum_probs=266.0
Q ss_pred EecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCC-cEEEeCChHHHHHHHHHHh
Q 040741 60 YLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPK-EIIFTSGATESNNVSIKGV 138 (457)
Q Consensus 60 ~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~-~i~~t~g~T~a~~~al~~~ 138 (457)
.|-.+|+.-+++++++||......+ ..........++.+-+...|..... -.++..+|+.+++.++-.+
T Consensus 19 ~L~gPGPsnl~~~V~~A~~~~~lgh----------~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~ 88 (385)
T KOG2862|consen 19 TLLGPGPSNLSGRVQEAMSRPSLGH----------MSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNL 88 (385)
T ss_pred eeecCCCcCCCHHHHHhhcCCcccc----------CCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhh
Confidence 3666677789999999988765432 1345567888999999999986533 3888889999999999999
Q ss_pred hhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC-CceEEEEeccccccccccC-hH
Q 040741 139 MHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP-DTGLISVMAVNNEIGVIQP-ME 216 (457)
Q Consensus 139 ~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~-~t~li~i~~~~~~~G~~~~-l~ 216 (457)
. .|||.|++....-.+. .++..+++.|++|.+++.+.+..+.++++++++.. ++++|+++|..+.||+..| ++
T Consensus 89 l----ePgd~vLv~~~G~wg~-ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~ 163 (385)
T KOG2862|consen 89 L----EPGDNVLVVSTGTWGQ-RAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLA 163 (385)
T ss_pred c----CCCCeEEEEEechHHH-HHHHHHHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccchHHH
Confidence 9 8999998866554443 34566777899999999998889999999999976 4689999999999999999 77
Q ss_pred HHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEecccc-ccCCCCceEEEEecCCCccccccccC-----------
Q 040741 217 EIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHK-IYGPKGVGALYMRRRPRIRVEPLING----------- 284 (457)
Q Consensus 217 ~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K-~~g~~G~G~l~~~~~~~~~~~~~~~~----------- 284 (457)
.+.++|++|+.++++|.+.++|..++.+++|++|+.....+| +.+|+|.+.+..+++..++++....+
T Consensus 164 ~~g~lc~k~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~ 243 (385)
T KOG2862|consen 164 ISGELCHKHEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYFDILRL 243 (385)
T ss_pred HHHHHhhcCCeEEEEechhhcCCccceehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEEeHHhh
Confidence 788999999999999999999999999999999999999999 56699999999998766665422221
Q ss_pred ---C--ccccccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeC-CCCCcccceEEEE
Q 040741 285 ---G--GQERGIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLDGVVVNG-SMERRYIGNLNLS 357 (457)
Q Consensus 285 ---~--~~~~~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~ 357 (457)
| ..+.+.+..|++...++++.+|+..+.+ ++++..++.++++++++..|++ .|++... +++.+.+....+.
T Consensus 244 ~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~--~GLq~fv~~e~~rlptvttv~ 321 (385)
T KOG2862|consen 244 GNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEA--LGLQLFVVDEELRLPTVTTVK 321 (385)
T ss_pred cchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCccceecChhhccCcceeee
Confidence 1 1223556779999999999999998765 6999999999999999999999 5777653 3444555555555
Q ss_pred Ec-cccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCC-CCHHHHHHHHHHHHHHHHH
Q 040741 358 FA-YVEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRF-TTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 358 ~~-~~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~-~t~edid~~~~~l~~~~~~ 432 (457)
.+ +++..++...+ .++.+..|.. +..+..+||+.... -+.|.|+..++.|+.++.+
T Consensus 322 vp~gvDw~dVv~~~~~~~~vei~gglg-------------------~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 322 VPYGVDWKDVVAYAMSHYVVEIGGGLG-------------------PTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred cCCCCCHHHHHHHHHHhcCEEeccccC-------------------CCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 53 46666666655 2444443322 23348999997665 4688999999999888865
Q ss_pred H
Q 040741 433 L 433 (457)
Q Consensus 433 ~ 433 (457)
-
T Consensus 383 ~ 383 (385)
T KOG2862|consen 383 K 383 (385)
T ss_pred c
Confidence 3
No 77
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=4.2e-27 Score=231.48 Aligned_cols=314 Identities=16% Similarity=0.143 Sum_probs=230.2
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHH
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVS 134 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~a 134 (457)
.+.+.|+.+.+. ++++++++++.+.+.....+|. ....++++.+++++|++++++++|+|+++++.++
T Consensus 29 ~~~i~l~~nen~~~~~~~v~~a~~~~~~~~~~Yp~-----------~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~ 97 (366)
T PRK01533 29 HSFVKLASNENPFGCSPRVLDELQKSWLDHALYPD-----------GGATTLRQTIANKLHVKMEQVLCGSGLDEVIQII 97 (366)
T ss_pred CceEEeCCCCCCCCCCHHHHHHHHHHHHhcCcCCC-----------CCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHH
Confidence 466889888777 6889999999887654321221 2356799999999999999999999999999999
Q ss_pred HHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccC
Q 040741 135 IKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQP 214 (457)
Q Consensus 135 l~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~ 214 (457)
+.++. ++|+.|++..++|+.+...++.. |.+++.++.+ ++.+|+++++++++++++++++++++||||.+.+
T Consensus 98 ~~~l~----~~gd~vlv~~P~y~~~~~~~~~~---g~~v~~v~~~-~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~ 169 (366)
T PRK01533 98 SRAVL----KAGDNIVTAGATFPQYRHHAIIE---GCEVKEVALN-NGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVN 169 (366)
T ss_pred HHHhc----CCCCEEEEcCCcHHHHHHHHHHc---CCEEEEeecC-CCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcC
Confidence 99988 89999999999998888877665 9999999986 4568999999999989999999999999999999
Q ss_pred hHHHHHH---HHhcCCcEEEehhhhcCCC------ccc-CCCCcccEEEeccccccCCCC--ceEEEEecCCCccccccc
Q 040741 215 MEEIGQI---CKEFKIPFHTDAAQALGKI------PVD-VEKWNVSLMSLSGHKIYGPKG--VGALYMRRRPRIRVEPLI 282 (457)
Q Consensus 215 l~~i~~l---~~~~~v~li~D~a~~~g~~------~~~-~~~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~ 282 (457)
.+++.++ |++++ ++++|+++.-... ... +...+..+++.|++|.||.+| +|+++++++.++++....
T Consensus 170 ~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~~~~l~~~~ 248 (366)
T PRK01533 170 DRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEELIEKLNVVR 248 (366)
T ss_pred HHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCHHHHHHHHHhc
Confidence 6665555 44555 6778999862111 011 112234588899999888666 899998877666554432
Q ss_pred cCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcccc
Q 040741 283 NGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVE 362 (457)
Q Consensus 283 ~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (457)
.. ...+.....++..+++. .+..+...+..++.++++.+.++. + ++.+..+ ..+++.+.++ +
T Consensus 249 ~~---------~~~~~~~q~aa~~~l~~-~~~~~~~~~~~~~~r~~~~~~l~~-~-g~~~~~~----~~nf~~~~~~--~ 310 (366)
T PRK01533 249 LP---------FNVSSLAQKAATIAFGD-DEFIEEIVRVNTEGLRQYESFCKE-N-EIPFYQS----QTNFIFLPVE--N 310 (366)
T ss_pred CC---------CCcCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHh-C-CCccCCC----cCcEEEEeCC--C
Confidence 11 24565666666556642 223556667777788888888877 4 5655433 1445555543 4
Q ss_pred chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 363 GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 363 ~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
...+...| +||.+++ | .++|||+++. .++.++++++|++.++-.+
T Consensus 311 ~~~~~~~l~~~GI~Vr~---~---------------------~~~iRis~~~---~~~~~~l~~al~~~~~~~~ 357 (366)
T PRK01533 311 GGEIYEACAHAGFIIRP---F---------------------PNGVRITVGT---REQNEGVISVLQQHFENKK 357 (366)
T ss_pred HHHHHHHHHHCCcEEcc---C---------------------CCceEEeCCC---HHHHHHHHHHHHHHHHhcc
Confidence 45666665 6888874 1 1689999984 8999999999998876443
No 78
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1.2e-26 Score=230.34 Aligned_cols=325 Identities=15% Similarity=0.073 Sum_probs=226.0
Q ss_pred CcEEecCCCCC-CCCHHHHHHHHHHHhhc-cCCCCCCccchhhhHHHHHHHHHHHHHHHh------CCCCCcEEEeCChH
Q 040741 57 RPLYLDMQATT-PVDPRVLDAMLPFYLSR-YGNPHSRTHLFGWESEVAVETARSQIADLI------GASPKEIIFTSGAT 128 (457)
Q Consensus 57 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~la~~~------g~~~~~i~~t~g~T 128 (457)
+.+.|..+.+. +.++++++++.+..... ..++. .....++++.+++++ +++++++++|+|++
T Consensus 30 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~----------~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~ 99 (384)
T PRK06348 30 DIIDLSLGDPDLITDESIINAAFEDAKKGHTRYTD----------SGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGAC 99 (384)
T ss_pred CcEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCC----------CCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChH
Confidence 44666665555 44567777665544321 11111 122345666666666 45788999999999
Q ss_pred HHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC--CCCCCCHHHHHHhcCCCceEEEEeccc
Q 040741 129 ESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG--ADGIVNLDELRAAIRPDTGLISVMAVN 206 (457)
Q Consensus 129 ~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~le~~i~~~t~li~i~~~~ 206 (457)
+|+.+++.++. ++|+.|+++.+.|+.+...+..+ |.+++.++.. .++.+|++++++++++++++|++++++
T Consensus 100 ~al~~~~~~~~----~~gd~vlv~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~ 172 (384)
T PRK06348 100 HGMYLALQSIL----DPGDEVIIHEPYFTPYKDQIEMV---GGKPIILETYEEDGFQINVKKLEALITSKTKAIILNSPN 172 (384)
T ss_pred HHHHHHHHHhc----CCCCEEEEeCCCCcchHHHHHHc---CCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCC
Confidence 99999999998 89999999999999998888776 9899888864 344689999999998899999999999
Q ss_pred cccccccC---hHHHHHHHHhcCCcEEEehhhhcCC---Cccc---CCC-CcccEEEeccccccCCCC--ceEEEEecCC
Q 040741 207 NEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGK---IPVD---VEK-WNVSLMSLSGHKIYGPKG--VGALYMRRRP 274 (457)
Q Consensus 207 ~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~---~~~~---~~~-~~~Di~~~s~~K~~g~~G--~G~l~~~~~~ 274 (457)
||||.+.+ +++|.++|++||++|++|++++-.. .... +.. .+..+++.|++|.+|.+| +|+++++++.
T Consensus 173 NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~ 252 (384)
T PRK06348 173 NPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDYI 252 (384)
T ss_pred CCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeeecCHHH
Confidence 99999988 6778888999999999999987321 1111 111 234588889999877544 8999998766
Q ss_pred CccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceE
Q 040741 275 RIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNL 354 (457)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 354 (457)
+.++....... ..+.+.....++..++......+++.++.++++++++.+.|.+ ++++.+..+ +. +.++
T Consensus 253 ~~~~~~~~~~~-------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~-~~~~~~~~p-~g--g~~~ 321 (384)
T PRK06348 253 IETAKIINEGI-------CFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIES-IPNLSLHPP-KG--SIYA 321 (384)
T ss_pred HHHHHHHHHhc-------cCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc-CCCceeccC-Ce--eEEE
Confidence 55544333211 1134444455555555443334677788888889999999988 777665542 21 2233
Q ss_pred EEEEc--cccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHH
Q 040741 355 NLSFA--YVEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVK 428 (457)
Q Consensus 355 ~~~~~--~~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~ 428 (457)
.+.++ +.+..++...+ .||.+.+|..+.. ...++|||+++ .+.++++.++++|++
T Consensus 322 ~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~-----------------~~~~~iRi~~~--~~~~~l~~al~~l~~ 381 (384)
T PRK06348 322 FINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGE-----------------SGEGYIRLACT--VGIEVLEEAFNRIEK 381 (384)
T ss_pred EEecccCCCCHHHHHHHHHHhCCEEEcCchhhcc-----------------CCCCeEEEEec--CCHHHHHHHHHHHHh
Confidence 44454 34566666654 4899998875421 12379999996 368888888888764
No 79
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=1.6e-26 Score=228.44 Aligned_cols=319 Identities=18% Similarity=0.161 Sum_probs=228.8
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHH
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVS 134 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~a 134 (457)
.+.+.|..+.+. .+++.+.+++.+.......+|.. ...++++.+++++|++++++++|+|+++++.++
T Consensus 32 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~-----------~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~ 100 (367)
T PRK02731 32 ADIIKLASNENPLGPSPKAIEAIRAAADELHRYPDG-----------SGFELKAALAEKFGVDPERIILGNGSDEILELL 100 (367)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHhhcCCCCC-----------cHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHH
Confidence 344566554333 46788999998877543222221 135799999999999888999999999999998
Q ss_pred HHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccC
Q 040741 135 IKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQP 214 (457)
Q Consensus 135 l~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~ 214 (457)
+.++. ++|+.|+++.+.|..+...++. .|.+++.++.+ ++.+|++++++++++++++|++++++||+|.+.|
T Consensus 101 ~~~l~----~~gd~vl~~~p~y~~~~~~~~~---~g~~~~~~~~~-~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~ 172 (367)
T PRK02731 101 ARAYL----GPGDEVIYSEHGFAVYPIAAQA---VGAKPVEVPAK-DYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLP 172 (367)
T ss_pred HHHhc----CCCCEEEEecCCHHHHHHHHHH---cCCeEEEeccc-CCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCC
Confidence 88887 8999999999998766655544 49999999874 5678999999999989999999999999999999
Q ss_pred hHHHHHHHHhc--CCcEEEehhhhcCCC------cccC-CCCcccEEEeccccccCCCC--ceEEEEecCCCcccccccc
Q 040741 215 MEEIGQICKEF--KIPFHTDAAQALGKI------PVDV-EKWNVSLMSLSGHKIYGPKG--VGALYMRRRPRIRVEPLIN 283 (457)
Q Consensus 215 l~~i~~l~~~~--~v~li~D~a~~~g~~------~~~~-~~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~ 283 (457)
.+++.++++.+ ++++++|++|..... .++. ......+++.|++|.+|.+| +|+++++++.++++.....
T Consensus 173 ~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~l~~~~~ 252 (367)
T PRK02731 173 AEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPPEIIDALNRVRQ 252 (367)
T ss_pred HHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCHHHHHHHHHccC
Confidence 99999998875 899999999864321 1111 11123577889999887655 7999998876665544321
Q ss_pred CCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEc-ccc
Q 040741 284 GGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFA-YVE 362 (457)
Q Consensus 284 ~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 362 (457)
. ...+.....++..+++. ...+++..+..+++.+++.+.|++ . ++.+.. +. ..++.+.++ ..+
T Consensus 253 ~---------~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~-~~---g~~~~i~~~~~~~ 316 (367)
T PRK02731 253 P---------FNVNSLALAAAVAALDD-DAFVEKSRALNAEGMAWLTEFLAE-L-GLEYIP-SV---GNFILVDFDDGKD 316 (367)
T ss_pred C---------CCCCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHH-C-CCccCC-CC---ceEEEEECCCCCC
Confidence 1 12233444433334431 123677788888889999999988 5 665542 11 445555553 235
Q ss_pred chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 363 GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 363 ~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
..++...| +||.+.++..+ | ..++||++++ +.+++++++++|+++++
T Consensus 317 ~~~~~~~L~~~gI~v~~~~~~--------------~-----~~~~iRis~~---~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 317 AAEAYQALLKRGVIVRPVAGY--------------G-----LPNALRITIG---TEEENRRFLAALKEFLA 365 (367)
T ss_pred HHHHHHHHHHCCEEEEeCCCC--------------C-----CCCeEEEecC---CHHHHHHHHHHHHHHHh
Confidence 56666666 79988876432 1 1278999997 58999999999998764
No 80
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=1.6e-26 Score=212.72 Aligned_cols=340 Identities=16% Similarity=0.163 Sum_probs=254.0
Q ss_pred CcEEecCCCCC-----CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCC------CCCcEEEeC
Q 040741 57 RPLYLDMQATT-----PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGA------SPKEIIFTS 125 (457)
Q Consensus 57 ~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~------~~~~i~~t~ 125 (457)
..|-|.++-++ +.++++.+|+.+.+++.-+| +|.....+..+|+.+|++++- +++++++|+
T Consensus 62 ~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N--------~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~lts 133 (447)
T KOG0259|consen 62 PILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGN--------GYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTS 133 (447)
T ss_pred eeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCC--------CcCCccccHHHHHHHHHHhhcCCCCccCcCceEEec
Confidence 45666665555 46799999999999876555 333445788899999999753 456799999
Q ss_pred ChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeC--CCCCCCCHHHHHHhcCCCceEEEEe
Q 040741 126 GATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPV--GADGIVNLDELRAAIRPDTGLISVM 203 (457)
Q Consensus 126 g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~le~~i~~~t~li~i~ 203 (457)
|.++|+++++.++. +||..|+++++.|+-+..-+.+. |++|++++. +.++.+|++.+|++++++|..+++.
T Consensus 134 GC~qAIe~~i~~LA----~p~aNILlPrPGfp~Y~~~a~~~---~lEVR~ydlLPe~~weIDL~~veal~DENT~Aivvi 206 (447)
T KOG0259|consen 134 GCSQAIELAISSLA----NPGANILLPRPGFPLYDTRAIYS---GLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVI 206 (447)
T ss_pred cchHHHHHHHHHhc----CCCCceecCCCCCchHHHhhhhc---CceeEeecccCcccceechHHHHHhhccCeeEEEEe
Confidence 99999999999999 99999999999999988777776 999999876 4678999999999999999999999
Q ss_pred ccccccccccC---hHHHHHHHHhcCCcEEEehhhh---cCCCccc----CCCCcccEEEecccc-ccCCC-CceEEEEe
Q 040741 204 AVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQA---LGKIPVD----VEKWNVSLMSLSGHK-IYGPK-GVGALYMR 271 (457)
Q Consensus 204 ~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~---~g~~~~~----~~~~~~Di~~~s~~K-~~g~~-G~G~l~~~ 271 (457)
+++||+|.++. |++|+++|+++++++|.|++|. +|..++- +...-+-+.+++.+| |+-|. .+||+++.
T Consensus 207 NP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~h 286 (447)
T KOG0259|consen 207 NPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALH 286 (447)
T ss_pred CCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEe
Confidence 99999999988 8999999999999999999996 3444331 222234567888999 76543 49999998
Q ss_pred cCCCcccccccc-CCccccccccCCCChhHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCc
Q 040741 272 RRPRIRVEPLIN-GGGQERGIRSGTLPTPLIVGFGSACEIAKKE-MDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERR 349 (457)
Q Consensus 272 ~~~~~~~~~~~~-~~~~~~~~~~~t~~~~~~~al~~al~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 349 (457)
+.. ..++.... -+....--....|+.....|+-..++...++ +.....-++.+++...+.|++ +|++..+..|++.
T Consensus 287 D~~-gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~-IP~l~cp~kPeg~ 364 (447)
T KOG0259|consen 287 DPR-GVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKD-IPCLTCPVKPEGC 364 (447)
T ss_pred ccc-ccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhc-CCCcccCcCCCcc
Confidence 742 22221110 0000000112244555555555555544443 778888889999999999999 9999977777765
Q ss_pred ccceEEEEEc---c-ccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHH
Q 040741 350 YIGNLNLSFA---Y-VEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRA 422 (457)
Q Consensus 350 ~~~~~~~~~~---~-~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~ 422 (457)
...++.+.+. . .++.+++..| +.+.+-+|.++ |.. +|+|+++.- ..+.++++
T Consensus 365 mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af--------------~~~-----nw~Ri~i~~--~~~~leea 423 (447)
T KOG0259|consen 365 MYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAF--------------GLK-----NWLRIVITV--EEEMLEEA 423 (447)
T ss_pred eEEEeccchhhhccccccHHHHHHHhhhcceEEeccccc--------------cCC-----CeEEEEEcc--ChHHHHHH
Confidence 5555544443 2 2456777777 68888888643 333 899999985 66899999
Q ss_pred HHHHHHHHHHHH
Q 040741 423 IELTVKQVEKLR 434 (457)
Q Consensus 423 ~~~l~~~~~~~~ 434 (457)
+++|+++.++.-
T Consensus 424 ~~Rik~Fc~RH~ 435 (447)
T KOG0259|consen 424 FSRIKEFCDRHS 435 (447)
T ss_pred HHHHHHHHHhhh
Confidence 999999998764
No 81
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.96 E-value=1.3e-26 Score=230.41 Aligned_cols=326 Identities=16% Similarity=0.167 Sum_probs=225.9
Q ss_pred CcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh----CC--CCC-cEEEeCChH
Q 040741 57 RPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI----GA--SPK-EIIFTSGAT 128 (457)
Q Consensus 57 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~----g~--~~~-~i~~t~g~T 128 (457)
+.+.|+.+.+. +.++.+.+++.+.+... . .+.|+ ......++++.+++++ |. +++ ++++|+|++
T Consensus 30 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~Y~--~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~ 101 (383)
T TIGR03540 30 DVISLGIGDPDLPTPKHIVEALCKAAENP--E----NHRYP--SYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSK 101 (383)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhCC--C----CCCCC--CCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcH
Confidence 44666666555 45788889988876421 0 01111 1112345566666654 44 444 589999999
Q ss_pred HHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC-C-CCCCHHHHHHhcCCCceEEEEeccc
Q 040741 129 ESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA-D-GIVNLDELRAAIRPDTGLISVMAVN 206 (457)
Q Consensus 129 ~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~-~-~~~d~~~le~~i~~~t~li~i~~~~ 206 (457)
+++.+++..++ ++|++|++..+.|+.+...++.+ |.+++.++.+. + ..+|++++++++.+++++|++++++
T Consensus 102 ~~l~~~~~~~~----~~gd~vlv~~P~y~~~~~~~~~~---G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~ 174 (383)
T TIGR03540 102 EGIAHIPLAFV----NPGDIVLVPDPGYPVYRIGTLFA---GGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPN 174 (383)
T ss_pred HHHHHHHHHhC----CCCCEEEEeCCCCcchHHHHHhc---CCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCC
Confidence 99999999988 89999999999999998877666 99999999873 2 4579999999998899999999999
Q ss_pred cccccccC---hHHHHHHHHhcCCcEEEehhhhcCC----CcccC---CC-CcccEEEeccccccCCCC--ceEEEEecC
Q 040741 207 NEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGK----IPVDV---EK-WNVSLMSLSGHKIYGPKG--VGALYMRRR 273 (457)
Q Consensus 207 ~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~----~~~~~---~~-~~~Di~~~s~~K~~g~~G--~G~l~~~~~ 273 (457)
||||.+.+ +++|+++|++||+++++|++|+-.. .+..+ .. .+..+++.|++|.||.+| +|+++.+++
T Consensus 175 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~~ 254 (383)
T TIGR03540 175 NPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNAD 254 (383)
T ss_pred CCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCHH
Confidence 99999999 6889999999999999999997321 11111 11 134577889999998777 999998877
Q ss_pred CCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccce
Q 040741 274 PRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGN 353 (457)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 353 (457)
.++++...... ... ..+.+...++..+++...+.+++..+.++++++.+.+.|++ . ++.+..+.. ..+
T Consensus 255 l~~~~~~~~~~------~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~-~-~~~~~~~~~---~~~ 322 (383)
T TIGR03540 255 LIAGLGKVKTN------VDS-GVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKK-I-GIDVEKPKA---TFY 322 (383)
T ss_pred HHHHHHHHHHh------ccc-CCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh-C-CCEecCCCc---ceE
Confidence 66655443221 111 22333344444455433344677788889999999999998 5 676654321 222
Q ss_pred EEEEEc-cccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHH
Q 040741 354 LNLSFA-YVEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVK 428 (457)
Q Consensus 354 ~~~~~~-~~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~ 428 (457)
+.+.++ ..+..++...+ +||.+.+|..|.. ...+++||+++. +.++++..+++|++
T Consensus 323 ~~~~l~~~~~~~~~~~~ll~~~gi~v~~g~~f~~-----------------~~~~~~Ris~~~--~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 323 VWVPVPEGYTSAEFAARLLEETGVVVTPGVGFGE-----------------YGEGYIRISLTV--PDERLEEAVARIKK 382 (383)
T ss_pred EEEECCCCCCHHHHHHHHHHHCCEEEecchhhCc-----------------cCCCeEEEEecC--CHHHHHHHHHHHhh
Confidence 344443 33456666654 5899998875521 112799999974 57777777776653
No 82
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.96 E-value=2.4e-26 Score=236.20 Aligned_cols=334 Identities=15% Similarity=0.130 Sum_probs=229.0
Q ss_pred CCcEEecCCCCC----CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh------CCCCCcEEEeC
Q 040741 56 GRPLYLDMQATT----PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI------GASPKEIIFTS 125 (457)
Q Consensus 56 ~~~i~l~~~~~~----~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~------g~~~~~i~~t~ 125 (457)
.+.+.|+.+.+. +.|+++.+++.+.+....+++. .....++|+.+++++ ++++++|++|+
T Consensus 146 ~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~~~Y~~----------~~G~~~lReaia~~~~~~~~~~~~~~~I~it~ 215 (517)
T PRK13355 146 THILKLNIGNPAPFGFRTPDEVVYDMAQQLTDTEGYSD----------SKGLFSARKAIMQYAQLKGLPNVDVDDIYTGN 215 (517)
T ss_pred CCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcCCCCCC----------CcChHHHHHHHHHHHHhcCCCCCChhHEEEeC
Confidence 366888886663 3488899999887653222211 134677888888888 67888999999
Q ss_pred ChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC--CCCCCHHHHHHhcCCCceEEEEe
Q 040741 126 GATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA--DGIVNLDELRAAIRPDTGLISVM 203 (457)
Q Consensus 126 g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~le~~i~~~t~li~i~ 203 (457)
|+++++.+++.+++ ++||+|+++.+.|+.+...++.. |.+++.++++. ++.+|++++++++++++++|+++
T Consensus 216 G~~eal~~~~~~l~----~~Gd~Vli~~P~y~~y~~~~~~~---g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i~i~ 288 (517)
T PRK13355 216 GVSELINLSMSALL----DDGDEVLIPSPDYPLWTACVNLA---GGTAVHYRCDEQSEWYPDIDDIRSKITSRTKAIVII 288 (517)
T ss_pred cHHHHHHHHHHHhC----CCCCEEEEcCCCCcCHHHHHHHC---CCEEEEeecCcccCCCCCHHHHHHhcCcCceEEEEE
Confidence 99999999999988 89999999999999998877766 99999998763 45789999999999999999999
Q ss_pred ccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCC----CcccCCCCccc---EEEeccccccCCCC--ceEEEEe
Q 040741 204 AVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGK----IPVDVEKWNVS---LMSLSGHKIYGPKG--VGALYMR 271 (457)
Q Consensus 204 ~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~----~~~~~~~~~~D---i~~~s~~K~~g~~G--~G~l~~~ 271 (457)
+++||||.+++ +++|+++|++||++||+|++|.--. ....+.....+ +.+.|++|.|+.+| +||+++.
T Consensus 289 nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~ 368 (517)
T PRK13355 289 NPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILS 368 (517)
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEee
Confidence 99999999999 7889999999999999999987321 11111111112 33578999887666 8999965
Q ss_pred c--CCCccccccccCCccccccccCCCChhHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCC
Q 040741 272 R--RPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIA---KKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSM 346 (457)
Q Consensus 272 ~--~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 346 (457)
. +....+...+.. ..... .+.+.+...++..++... .+.+... .+..+.++++.+.|.+ ++++.+..+.
T Consensus 369 ~~~~~~~~~~~~l~~---~~~~~-~~~~~~~q~a~~~aL~~~~~~~~~~~~~-~~~~~~r~~l~~~L~~-~~g~~~~~p~ 442 (517)
T PRK13355 369 GNKRIAKDYIEGLNM---LANMR-LCSNVPAQSIVQTALGGHQSVKDYLVPG-GRVYEQRELVYNALNA-IPGISAVKPK 442 (517)
T ss_pred CchhhHHHHHHHHHH---HhcCc-CCcChHHHHHHHHHhcCCccHHHHHHHH-HHHHHHHHHHHHHHhc-CCCcccCCCC
Confidence 2 221111111100 00011 134555555555565321 2223332 3444567888889988 7888766532
Q ss_pred CCcccceEEEEEcc-----ccchHHHhc-c--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHH
Q 040741 347 ERRYIGNLNLSFAY-----VEGESLLMG-L--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAE 418 (457)
Q Consensus 347 ~~~~~~~~~~~~~~-----~~~~~~~~~-l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~ed 418 (457)
. ..++.+.++. .+..+++.. | +||.+.+|..|.. ...+++||++. .+.++
T Consensus 443 g---~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~-----------------~~~~~~Ris~~--~~~~~ 500 (517)
T PRK13355 443 A---AFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNW-----------------DKPDHFRVVYL--PRLED 500 (517)
T ss_pred e---eeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCC-----------------CCcCEEEEEeC--CCHHH
Confidence 1 1222223331 123344433 3 6999999875421 12379999995 57899
Q ss_pred HHHHHHHHHHHHHHHH
Q 040741 419 VDRAIELTVKQVEKLR 434 (457)
Q Consensus 419 id~~~~~l~~~~~~~~ 434 (457)
++..+++|.++++..+
T Consensus 501 l~~a~~rl~~~~~~~~ 516 (517)
T PRK13355 501 LEDAMDRLADFFSYYR 516 (517)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999987654
No 83
>PRK07337 aminotransferase; Validated
Probab=99.96 E-value=1.1e-26 Score=231.05 Aligned_cols=331 Identities=14% Similarity=0.087 Sum_probs=229.6
Q ss_pred CCCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh----C--CCCCcEEEeCCh
Q 040741 55 AGRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI----G--ASPKEIIFTSGA 127 (457)
Q Consensus 55 ~~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~----g--~~~~~i~~t~g~ 127 (457)
..+.++|+.+.+. +.++.+.+++.+.+.... . . |.......++++.+++++ | ++++++++|+|+
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~---~----~--Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~ 99 (388)
T PRK07337 29 GRDIIHMGIGEPDFTAPEPVVEAAARALRRGV---T----Q--YTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGA 99 (388)
T ss_pred CCCEEEeCCcCCCCCCCHHHHHHHHHHHhcCC---C----C--CCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCc
Confidence 3466899988877 467888999988775321 0 0 111123556677777765 4 477889999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC--CCCCCHHHHHHhcCCCceEEEEecc
Q 040741 128 TESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA--DGIVNLDELRAAIRPDTGLISVMAV 205 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~le~~i~~~t~li~i~~~ 205 (457)
++|+.+++.+++ ++||+|+++.++|+.+...+... |.+++.++.+. ++.+|++++++++++++++|+++++
T Consensus 100 ~~al~~~~~~l~----~~gd~Vlv~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p 172 (388)
T PRK07337 100 SAALLLACLALV----ERGDEVLMPDPSYPCNRHFVAAA---EGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASP 172 (388)
T ss_pred HHHHHHHHHHhc----CCCCEEEEeCCCchhhHHHHHHc---CCEEEEeecCCccCCcCCHHHHHhhcCccceEEEEECC
Confidence 999999999887 89999999999999987766555 99999999863 3578999999999999999999999
Q ss_pred ccccccccC---hHHHHHHHHhcCCcEEEehhhhcCCC---cccCCCCccc-EEEeccccccCCCC--ceEEEEecCCCc
Q 040741 206 NNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKI---PVDVEKWNVS-LMSLSGHKIYGPKG--VGALYMRRRPRI 276 (457)
Q Consensus 206 ~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~---~~~~~~~~~D-i~~~s~~K~~g~~G--~G~l~~~~~~~~ 276 (457)
+||||.+.+ +++|+++|+++++++++|+++..-.. +......+.+ +++.|++|.+|.+| +|+++++++.++
T Consensus 173 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~~~l~~ 252 (388)
T PRK07337 173 SNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVVPEALVG 252 (388)
T ss_pred CCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcCCchhheeeeecCHHHHH
Confidence 999999987 67788899999999999999863211 1111122233 45679999887666 899999877666
Q ss_pred cccccccCCccccccccCCCChhHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEE
Q 040741 277 RVEPLINGGGQERGIRSGTLPTPLIVGFGSACEI-AKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLN 355 (457)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 355 (457)
++....... ....+.....++..++.. ..+.+.+..+.++++++++.+.|++ + ++.+...+.. +.++.
T Consensus 253 ~l~~~~~~~-------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~-~-~~~~~~~p~~--g~f~~ 321 (388)
T PRK07337 253 TFEKLAQNL-------FICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALES-L-GFKVPVMPDG--AFYVY 321 (388)
T ss_pred HHHHHHHHh-------ccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHh-c-CCccccCCCe--eEEEE
Confidence 554433211 113344444444444431 1123566777888888999999988 4 4443211221 34444
Q ss_pred EEEcc------ccchHHHhc-c--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHH
Q 040741 356 LSFAY------VEGESLLMG-L--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELT 426 (457)
Q Consensus 356 ~~~~~------~~~~~~~~~-l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l 426 (457)
+.++. .+..++... + +||.+.+|..|.. . ...+++|++++. +.++++..+++|
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~--------------~--~~~~~~Ri~~~~--~~~~l~~~l~rl 383 (388)
T PRK07337 322 ADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGP--------------H--APRDYIRLSYAT--SMSRLEEAVARL 383 (388)
T ss_pred EecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCC--------------C--CCCCEEEEEecC--CHHHHHHHHHHH
Confidence 55542 244566544 3 6999999875432 1 123799999996 588888888888
Q ss_pred HHHH
Q 040741 427 VKQV 430 (457)
Q Consensus 427 ~~~~ 430 (457)
.+++
T Consensus 384 ~~~l 387 (388)
T PRK07337 384 GKLF 387 (388)
T ss_pred HHHh
Confidence 7654
No 84
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=1.2e-26 Score=228.28 Aligned_cols=318 Identities=16% Similarity=0.131 Sum_probs=233.5
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhh--ccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCC-CcEEEeCChHHHH
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLS--RYGNPHSRTHLFGWESEVAVETARSQIADLIGASP-KEIIFTSGATESN 131 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~-~~i~~t~g~T~a~ 131 (457)
.+.++|+.+.+. ++++++++++.+.+.. ...+|. ....++++.+++++|.++ +++++|+|+++++
T Consensus 26 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-----------~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i 94 (356)
T PRK04870 26 TGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPD-----------PRAAALKAALRAAMGVPAGADVLLGNGSDELI 94 (356)
T ss_pred CCceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCC-----------CCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHH
Confidence 467899888777 6889999999988753 111111 134689999999999875 4799999999999
Q ss_pred HHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcC-CCceEEEEeccccccc
Q 040741 132 NVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIR-PDTGLISVMAVNNEIG 210 (457)
Q Consensus 132 ~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~-~~t~li~i~~~~~~~G 210 (457)
.+++.++. ++|+.|+++.+.|..+...++.. |++++.++.++++.+|+++++++++ .++++|++++++||||
T Consensus 95 ~~~~~~~~----~~gd~vlv~~P~y~~~~~~~~~~---g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG 167 (356)
T PRK04870 95 QLLALACA----KPGATVLAPEPGFVMYRMSAKLA---GLEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTG 167 (356)
T ss_pred HHHHHHhc----CCCCEEEECCCCHHHHHHHHHHc---CCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCC
Confidence 99999888 89999999999998877766555 9999999998778899999999996 4789999999999999
Q ss_pred cccChHHHHHHHHhcCCcEEEehhhhcCCC-c--ccCCCCcccEEEeccccccCCCC--ceEEEEecCCCccccccccCC
Q 040741 211 VIQPMEEIGQICKEFKIPFHTDAAQALGKI-P--VDVEKWNVSLMSLSGHKIYGPKG--VGALYMRRRPRIRVEPLINGG 285 (457)
Q Consensus 211 ~~~~l~~i~~l~~~~~v~li~D~a~~~g~~-~--~~~~~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~ 285 (457)
.+.+.+++.++++..++++|+|+++..... . ..+...+..+++.|++| +|.+| +|+++++++.++++......+
T Consensus 168 ~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i~~~~~~~~~~ 246 (356)
T PRK04870 168 NLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAELDKVRPPY 246 (356)
T ss_pred CCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh-hhhHHHhhhhhhCCHHHHHHHHHccCCC
Confidence 999988888888777899999999852211 1 11222234578899999 77666 999999877666554433211
Q ss_pred ccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchH
Q 040741 286 GQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGES 365 (457)
Q Consensus 286 ~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (457)
..+.....++..+++. .+.+++..++++++++++.+.|.+ ++++.+..+ . .+++.+.++ +...
T Consensus 247 ---------~~~~~~q~~a~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~-~---~~~~~~~~~--~~~~ 309 (356)
T PRK04870 247 ---------NVNVLTQATALFALEH-VDVLDAQAAQLRAERTRLAAALAA-LPGVTVFPS-A---ANFILVRVP--DAAA 309 (356)
T ss_pred ---------cCCHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHHh-CCCcEECCC-C---CeEEEEECC--CHHH
Confidence 2333333333344432 223677788888999999999988 778765432 1 334444444 4455
Q ss_pred HHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Q 040741 366 LLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQ 429 (457)
Q Consensus 366 ~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~ 429 (457)
+...+ +||.+.++..+.. ...+++||+++ +.+++++++++|+++
T Consensus 310 ~~~~l~~~gI~v~~~~~f~~-----------------~~~~~iRis~~---~~~~~~~l~~al~~~ 355 (356)
T PRK04870 310 VFDGLKTRGVLVKNLSGMHP-----------------LLANCLRVTVG---TPEENAQFLAALKAA 355 (356)
T ss_pred HHHHHHHCCEEEEECCCCCC-----------------CCCCeEEEeCC---CHHHHHHHHHHHHHh
Confidence 66655 6899987753311 12379999998 589999999999865
No 85
>PRK08912 hypothetical protein; Provisional
Probab=99.96 E-value=1.1e-26 Score=231.08 Aligned_cols=331 Identities=19% Similarity=0.180 Sum_probs=228.7
Q ss_pred CcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh----C--CCCC-cEEEeCChH
Q 040741 57 RPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI----G--ASPK-EIIFTSGAT 128 (457)
Q Consensus 57 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~----g--~~~~-~i~~t~g~T 128 (457)
..+.|..+.+. +.|+.+.+++.+.+.... ..|+ ......++|+.+++++ | ++++ ++++|+|++
T Consensus 27 ~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~-------~~Y~--~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~ 97 (387)
T PRK08912 27 GAINLGQGFPDDPGPEDVRRAAADALLDGS-------NQYP--PMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGAT 97 (387)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhcCC-------CCCC--CCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcH
Confidence 44666655544 456778888777654211 0111 1112345555555544 4 4676 899999999
Q ss_pred HHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC-CCCCCHHHHHHhcCCCceEEEEecccc
Q 040741 129 ESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA-DGIVNLDELRAAIRPDTGLISVMAVNN 207 (457)
Q Consensus 129 ~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~-~~~~d~~~le~~i~~~t~li~i~~~~~ 207 (457)
+|+.+++.++. ++|++|+++.+.|+.+...++.. |.+++.++.+. ++.+|+++++++++++++++++++++|
T Consensus 98 ~al~~~~~~~~----~~gd~Vlv~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~N 170 (387)
T PRK08912 98 EALAAALLALV----EPGDEVVLFQPLYDAYLPLIRRA---GGVPRLVRLEPPHWRLPRAALAAAFSPRTKAVLLNNPLN 170 (387)
T ss_pred HHHHHHHHHhc----CCCCEEEEeCCCchhhHHHHHHc---CCEEEEEecCcccCcCCHHHHHHHhCccceEEEEeCCCC
Confidence 99999999887 89999999999999888776655 99999999863 567899999999998999999999999
Q ss_pred ccccccC---hHHHHHHHHhcCCcEEEehhhhcCCC------cc-cCCC-CcccEEEeccccccCCCC--ceEEEEecCC
Q 040741 208 EIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKI------PV-DVEK-WNVSLMSLSGHKIYGPKG--VGALYMRRRP 274 (457)
Q Consensus 208 ~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~------~~-~~~~-~~~Di~~~s~~K~~g~~G--~G~l~~~~~~ 274 (457)
|||.+.+ +++|.++|++|++++|+|++|+.... ++ .... .+.++++.|++|.||.+| +|+++++++.
T Consensus 171 PtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~ 250 (387)
T PRK08912 171 PAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPPL 250 (387)
T ss_pred CcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCHHH
Confidence 9999998 66789999999999999999863211 11 1111 245789999999988777 9999998776
Q ss_pred CccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceE
Q 040741 275 RIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNL 354 (457)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 354 (457)
++++....... ..+.+.....++..++....+.+++..++++++++++.+.|++ . ++.+..+ .. ..++
T Consensus 251 ~~~l~~~~~~~-------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~-~g--~~~l 318 (387)
T PRK08912 251 LRVLAKAHQFL-------TFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRR-I-GFPVLPS-QG--TYFL 318 (387)
T ss_pred HHHHHHHHhhc-------cccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh-C-CCcccCC-Cc--ceEE
Confidence 65554332111 1123333333343444322334677788889999999999998 5 6665543 21 2233
Q ss_pred EEEEcc----ccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHH
Q 040741 355 NLSFAY----VEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTV 427 (457)
Q Consensus 355 ~~~~~~----~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~ 427 (457)
.+.++. .+..++...+ +||.+.+|..+... ....+++||+++. ++++++..+++|+
T Consensus 319 ~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~---------------~~~~~~iRl~~~~--~~~~l~~~l~rl~ 381 (387)
T PRK08912 319 TVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEE---------------DPVTSVVRFCFAK--RDATLDEAVERLA 381 (387)
T ss_pred EecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCC---------------CCCCCEEEEEEeC--CHHHHHHHHHHHH
Confidence 444432 3455666654 59999988654321 1123799999996 5799999999998
Q ss_pred HHHHH
Q 040741 428 KQVEK 432 (457)
Q Consensus 428 ~~~~~ 432 (457)
+++++
T Consensus 382 ~~l~~ 386 (387)
T PRK08912 382 AARRR 386 (387)
T ss_pred HHHhc
Confidence 87753
No 86
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.96 E-value=1.3e-26 Score=229.25 Aligned_cols=334 Identities=16% Similarity=0.157 Sum_probs=231.1
Q ss_pred CcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHH
Q 040741 57 RPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIK 136 (457)
Q Consensus 57 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~ 136 (457)
.+||+. ++...+.+.+++..+..+..++ .|++...+.+.++++.+++++|.+. +++++||++|+.+++.
T Consensus 26 ~pi~~~---~~~~~~~~~~~~~~~~~~~~~~------~y~r~~~p~~~~le~~la~l~g~~~--~v~~ssG~~Ai~~al~ 94 (390)
T PRK08133 26 EALFLT---SSFVFESAAEAAARFAGEEPGN------IYSRFTNPTVTMFQERLAALEGAEA--CVATASGMAAILAVVM 94 (390)
T ss_pred CCccCC---CCcccCCHHHHHHhhcCCcCCc------eeECCCChHHHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHH
Confidence 457765 3444555666666554332222 2333345678899999999999864 8999999999999999
Q ss_pred HhhhhhcCCCCEEEEcCCCCcchHHHHH-HHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccCh
Q 040741 137 GVMHFYKDKKRHVITTQTEHKCVLDSCR-HLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPM 215 (457)
Q Consensus 137 ~~~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l 215 (457)
++. ++||+||++...|.+....+. .+...|+++++++.+ |+++++++++++|++|++++++||+|.+.|+
T Consensus 95 al~----~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-----d~~~l~~~i~~~tklV~ie~p~NptG~v~dl 165 (390)
T PRK08133 95 ALL----QAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLT-----DLDAWRAAVRPNTKLFFLETPSNPLTELADI 165 (390)
T ss_pred HHh----CCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCC-----CHHHHHHhcCcCCeEEEEECCCCCCCCcCCH
Confidence 887 899999999999988876554 345669999999875 8999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCC--c-eEEEEecCCCccccccccCCccccccc
Q 040741 216 EEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKG--V-GALYMRRRPRIRVEPLINGGGQERGIR 292 (457)
Q Consensus 216 ~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G--~-G~l~~~~~~~~~~~~~~~~~~~~~~~~ 292 (457)
++|.++|+++|+++++|++++.+..... ...++|+++.|++|++++.| + |+++.+++.++++.......+
T Consensus 166 ~~I~~la~~~gi~livD~t~~~~~~~~p-l~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g------ 238 (390)
T PRK08133 166 AALAEIAHAAGALLVVDNCFCTPALQQP-LKLGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAG------ 238 (390)
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCCc-hhhCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhC------
Confidence 9999999999999999999876543222 24478999999999877654 3 677766654444332221111
Q ss_pred cCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCC--------------CcccceEEEEE
Q 040741 293 SGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSME--------------RRYIGNLNLSF 358 (457)
Q Consensus 293 ~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~ 358 (457)
...+...... ++.. .+.+..+.++..+++.++.+.|++ .|++..+-.+. ..+++++.|.+
T Consensus 239 -~~~~~~~a~~---~l~g-l~tl~~R~~~~~~~a~~la~~L~~-~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l 312 (390)
T PRK08133 239 -PTLSPFNAWV---FLKG-LETLSLRMEAHSANALALAEWLEA-HPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEV 312 (390)
T ss_pred -CCCCHHHHHH---HHcc-cchHHHHHHHHHHHHHHHHHHHHh-CCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEE
Confidence 1222222221 2211 124677777888899999999998 77764332211 23577888887
Q ss_pred ccc--cchHHHhccc--CeEecccCccC----CCCCC----hhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHH
Q 040741 359 AYV--EGESLLMGLK--EVAVSSGSACT----SASLE----PSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELT 426 (457)
Q Consensus 359 ~~~--~~~~~~~~l~--~i~~~~g~~~~----~~~~~----~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l 426 (457)
.+- ....++..|+ .++++-|..-+ +.... +.-..+..|+.+ +.|||+++. ||+|.+++.|
T Consensus 313 ~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~----~liR~svGl----E~~~dl~~dl 384 (390)
T PRK08133 313 KGGREAAWRVIDATRLISITANLGDTKTTITHPATTTHGRLSPEARAAAGITE----GLIRVAVGL----EDVADIKADL 384 (390)
T ss_pred cCCHHHHHHHHHhCCcceEeccCCCcceeeecCCCCCcccCCHHHHHhcCCCC----CeEEEEeCc----CCHHHHHHHH
Confidence 531 1235555553 44555554322 22221 111244567665 899999997 7888899999
Q ss_pred HHHHH
Q 040741 427 VKQVE 431 (457)
Q Consensus 427 ~~~~~ 431 (457)
+++++
T Consensus 385 ~~al~ 389 (390)
T PRK08133 385 ARGLA 389 (390)
T ss_pred HHHhh
Confidence 88875
No 87
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=2e-26 Score=226.03 Aligned_cols=317 Identities=15% Similarity=0.146 Sum_probs=227.5
Q ss_pred cEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHH
Q 040741 58 PLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIK 136 (457)
Q Consensus 58 ~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~ 136 (457)
.+.|+.+.+. ++|+.+.+++.+.+... . ...|+ .....++|+.++++++++++++++|+|+++++.+++.
T Consensus 24 ~~~l~~~~~~~~~p~~~~~a~~~~~~~~--~----~~~y~---~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~ 94 (351)
T PRK14807 24 KYKMDANETPFELPEEVIKNIQEIVKSS--Q----VNIYP---DPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIML 94 (351)
T ss_pred eeEccCCCCCCCCCHHHHHHHHHHhhcC--c----ccCCC---CccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHH
Confidence 3667777776 67899999998877421 1 11111 1234789999999999999999999999999999999
Q ss_pred HhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC-CceEEEEeccccccccccCh
Q 040741 137 GVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP-DTGLISVMAVNNEIGVIQPM 215 (457)
Q Consensus 137 ~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~-~t~li~i~~~~~~~G~~~~l 215 (457)
++. ++||+|+++.+.|..+...++.. |++++.++.+.++.+|++++++++++ ++++|++++++||||.+.+.
T Consensus 95 ~l~----~~gd~Vlv~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~ 167 (351)
T PRK14807 95 AFI----NKGDVVIYPHPSFAMYSVYSKIA---GAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIER 167 (351)
T ss_pred Hhc----CCCCEEEEeCCChHHHHHHHHHc---CCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCH
Confidence 887 89999999999888766555554 99999999887778999999999975 89999999999999999999
Q ss_pred HHHHHHHHhcCCcEEEehhhhcC--CCccc-CCCCcccEEEeccccccCCCC--ceEEEEecCCCccccccccCCccccc
Q 040741 216 EEIGQICKEFKIPFHTDAAQALG--KIPVD-VEKWNVSLMSLSGHKIYGPKG--VGALYMRRRPRIRVEPLINGGGQERG 290 (457)
Q Consensus 216 ~~i~~l~~~~~v~li~D~a~~~g--~~~~~-~~~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~ 290 (457)
+++.++|++++.++++|++|.-- ..... ....+..+++.|++|.+|.+| +|+++.+++.++++......
T Consensus 168 ~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~~~~~~------ 241 (351)
T PRK14807 168 EDIIKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVKSP------ 241 (351)
T ss_pred HHHHHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEEecchHhcccchhceeeeecCHHHHHHHHHccCC------
Confidence 99999999988899999998521 11111 112234588899999888655 99999887666555432211
Q ss_pred cccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHHhcc
Q 040741 291 IRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGL 370 (457)
Q Consensus 291 ~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 370 (457)
...+.....++..+++. ..+++..+.++++++++.+.|.+ ++++.+.. +. .+++.+.++ +...+...+
T Consensus 242 ---~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~r~~l~~~l~~-~~g~~~~~-~~---~~~~~i~~~--~~~~~~~~l 309 (351)
T PRK14807 242 ---YNINSLSQVIALKVLRT--GVLKERVNYILNERERLIKELSK-IPGIKVYP-SK---TNFILVKFK--DADYVYQGL 309 (351)
T ss_pred ---CCcCHHHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHHh-CCCcEECc-CC---ccEEEEEcC--CHHHHHHHH
Confidence 12333444444444432 24566667778888889899987 77876643 22 334444443 345555555
Q ss_pred --cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Q 040741 371 --KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQ 429 (457)
Q Consensus 371 --~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~ 429 (457)
+||.+..+... ....+++||+++ +.++.+++++.|+++
T Consensus 310 ~~~gV~v~~~~~~------------------~~~~~~iRis~~---~~~~~~~l~~~l~~~ 349 (351)
T PRK14807 310 LERGILVRDFSKV------------------EGLEGALRITVS---SCEANDYLINGLKEL 349 (351)
T ss_pred HHCCEEEEECCCC------------------CCCCCeEEEEcC---CHHHHHHHHHHHHHh
Confidence 58888653210 011278999998 478889999888764
No 88
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.96 E-value=3.1e-26 Score=229.06 Aligned_cols=331 Identities=15% Similarity=0.122 Sum_probs=228.6
Q ss_pred EecCCCCC----CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHH
Q 040741 60 YLDMQATT----PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSI 135 (457)
Q Consensus 60 ~l~~~~~~----~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al 135 (457)
++++.++. ..+|++.+++.+.+.....++.+ ... .....+.+.++++.+++++|.+ .+++.++|++|+..++
T Consensus 47 ~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~-s~~-~~~~~~~~~~le~~la~~~g~~--~~~~~~SG~~An~~ai 122 (406)
T PRK13393 47 VTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGG-TRN-ISGTNHYHVLLEAELADLHGKE--AALLFTSGYVSNWAAL 122 (406)
T ss_pred EEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcc-ccc-ccCChHHHHHHHHHHHHHhCCC--cEEEeCCcHHHHHHHH
Confidence 45555554 25799999999998764322221 111 1122357889999999999974 3677777788999999
Q ss_pred HHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcC----CCceEEEEecccccccc
Q 040741 136 KGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIR----PDTGLISVMAVNNEIGV 211 (457)
Q Consensus 136 ~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~----~~t~li~i~~~~~~~G~ 211 (457)
..+... .+++.|+++..+|.++..+++.. |.++..++.+ |++++++.+. +++++|++++++|++|.
T Consensus 123 ~~l~~~--~~g~~I~~~~~~H~s~~~~~~~~---g~~~~~~~~~-----d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~ 192 (406)
T PRK13393 123 STLGSR--LPGCVILSDELNHASMIEGIRHS---RAEKRIFRHN-----DPADLERKLSDLDPHRPKLVAFESVYSMDGD 192 (406)
T ss_pred HHhhcC--CCCCEEEEccchhHHHHHHHHHc---CCeEEEeCCC-----CHHHHHHHHHhccCCCCEEEEEcCCCCCCCc
Confidence 977631 26788899999999999887654 7788777654 7777777664 36789999999999999
Q ss_pred ccChHHHHHHHHhcCCcEEEehhhhcCCC-ccc-----CC--CCcccEEEeccccccCCCCceEEEEecCCCcccccccc
Q 040741 212 IQPMEEIGQICKEFKIPFHTDAAQALGKI-PVD-----VE--KWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLIN 283 (457)
Q Consensus 212 ~~~l~~i~~l~~~~~v~li~D~a~~~g~~-~~~-----~~--~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~ 283 (457)
+.|+++|.++|+++|+++++|++|+.|.. +.. .. ...+|+++.|++|.+|..| |+++.+++..+.+.....
T Consensus 193 ~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G-G~~~~~~~~~~~l~~~~~ 271 (406)
T PRK13393 193 IAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG-GYITGSAALCDFIRSFAS 271 (406)
T ss_pred hhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC-ceeeCCHHHHHHHHHhCc
Confidence 99999999999999999999999986542 111 00 1136888899999988776 888877665444433221
Q ss_pred CCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcc-cc
Q 040741 284 GGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAY-VE 362 (457)
Q Consensus 284 ~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 362 (457)
++ ...++.++..++++.++++.+.+. ....++.+++.+++++.|.+ + ++.+... ..+++.+.+.. ..
T Consensus 272 ~~-----~~t~~~~p~~~aa~~aaL~~~~~~-~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~----~~~i~~v~~~~~~~ 339 (406)
T PRK13393 272 GF-----IFTTSLPPAVAAGALASVRHLKAS-SAERERHQDRVARLRARLDK-A-GIPHLPN----PSHIVPVMVGDPVL 339 (406)
T ss_pred Cc-----eecCccCHHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHH-c-CCCcCCC----CCCeEEEEeCCHHH
Confidence 11 123456666677777888876554 23346678889999999987 4 5544322 13344343322 12
Q ss_pred chHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 363 GESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 363 ~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
...+...| +||.+.++...+. ..+.+.|||+++.++|++|+|+++++|+++++++
T Consensus 340 ~~~l~~~L~~~~Gi~v~~~~~p~~----------------p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 340 CKQISDELLDRYGIYVQPINYPTV----------------PRGTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred HHHHHHHHHHhCCEEEEeECCCCC----------------CCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 34555554 3888876432111 1123689999999999999999999999988764
No 89
>PLN02656 tyrosine transaminase
Probab=99.96 E-value=2e-26 Score=230.45 Aligned_cols=333 Identities=16% Similarity=0.165 Sum_probs=231.3
Q ss_pred CCCcEEecCCCCC-----CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhC------CCCCcEEE
Q 040741 55 AGRPLYLDMQATT-----PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIG------ASPKEIIF 123 (457)
Q Consensus 55 ~~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g------~~~~~i~~ 123 (457)
..+.+.|..+.+. ++++.+.+++.+.+..... . +|.......++++.++++++ ++++++++
T Consensus 30 ~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~------~--~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~ 101 (409)
T PLN02656 30 GKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKF------N--GYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFI 101 (409)
T ss_pred CCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCC------C--CCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEE
Confidence 3566777777665 6679999999887764210 0 11111345567777777763 46788999
Q ss_pred eCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC--CCCCCCHHHHHHhcCCCceEEE
Q 040741 124 TSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG--ADGIVNLDELRAAIRPDTGLIS 201 (457)
Q Consensus 124 t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~le~~i~~~t~li~ 201 (457)
|+|+++|+.+++.+++ ++||+|+++++.|+.+...+... |++++.++.+ .++.+|++++++++++++++++
T Consensus 102 t~G~~~al~~~~~~l~----~~gd~Vlv~~p~y~~~~~~~~~~---g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~ 174 (409)
T PLN02656 102 TSGCTQAIDVALSMLA----RPGANILLPRPGFPIYELCAAFR---HLEVRYVDLLPEKGWEVDLDAVEALADQNTVALV 174 (409)
T ss_pred eCChHHHHHHHHHHHh----CCCCeEEEeCCCCCcHHHHHHHc---CCEEEEEeCCCcCCCCCCHHHHHHHhccCceEEE
Confidence 9999999999999987 89999999999998887666555 9999999985 2457899999999999999999
Q ss_pred EeccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCCC---c-cc---CCCCcccEEEeccccccCCCC--ceEEE
Q 040741 202 VMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKI---P-VD---VEKWNVSLMSLSGHKIYGPKG--VGALY 269 (457)
Q Consensus 202 i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~---~-~~---~~~~~~Di~~~s~~K~~g~~G--~G~l~ 269 (457)
+++++||||.+.+ +++|+++|+++|++||+|++++--.. . .. +.....-+++.|++|.|+.+| +|+++
T Consensus 175 l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i 254 (409)
T PLN02656 175 IINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFV 254 (409)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEEE
Confidence 9999999999976 77889999999999999999973211 1 11 112223477889999877666 99999
Q ss_pred Eec--------CCCccccccccCCccccccccCCCChhHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHHhhcCCCe
Q 040741 270 MRR--------RPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEI-AKKEMDYDHKRITALHDRLLNGIKEKLDGV 340 (457)
Q Consensus 270 ~~~--------~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 340 (457)
+.+ +.++++..... . .+.++.....++..+++. ....+++.+++++++++.+.+.|++ ++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~-~~~~ 325 (409)
T PLN02656 255 TTDPSGSFRDPKIVERIKKYFD-------I-LGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKE-IPCI 325 (409)
T ss_pred EeCcccccccHHHHHHHHHHHh-------h-hcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhh-CCCC
Confidence 852 23333322211 0 123444455555555542 1234777888888999999999988 6654
Q ss_pred EEeCCCCCcccceEEEEEcc-----c-cchHHHh-cc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecC
Q 040741 341 VVNGSMERRYIGNLNLSFAY-----V-EGESLLM-GL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIG 411 (457)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~-~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~ 411 (457)
.....+.. +.++.+.++. . +..++.. .+ +||.+.+|..|. . .+++||+++
T Consensus 326 ~~~~~p~g--g~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg--------------~-----~~~iRi~~~ 384 (409)
T PLN02656 326 TCPHKPEG--SMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVG--------------L-----KNWLRITFA 384 (409)
T ss_pred cCCcCCCe--EEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcC--------------C-----CCeEEEEeC
Confidence 32222222 2333344431 1 2334333 33 699999986542 1 279999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHH
Q 040741 412 RFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 412 ~~~t~edid~~~~~l~~~~~~~~ 434 (457)
. +++++++.+++|++++++..
T Consensus 385 ~--~~e~l~eal~rl~~~~~~~~ 405 (409)
T PLN02656 385 A--DPSSLEEALGRIKSFYLRHS 405 (409)
T ss_pred C--CHHHHHHHHHHHHHHHHHhc
Confidence 5 68999999999999887554
No 90
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.96 E-value=2.8e-26 Score=226.15 Aligned_cols=323 Identities=18% Similarity=0.207 Sum_probs=224.9
Q ss_pred EecCCCCC----CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHH
Q 040741 60 YLDMQATT----PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSI 135 (457)
Q Consensus 60 ~l~~~~~~----~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al 135 (457)
|+|+.++. +.++++++++.+++.. ++...+ .+...+...+...++++.++++++.+ +++++++ |++++..++
T Consensus 18 ~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~-~~~~~~g~~~~~~~l~~~la~~~~~~-~~i~~~~-G~~~~~~~l 93 (360)
T TIGR00858 18 LLNFSSNDYLGLASHPEVIQAAQQGAEQ-YGAGST-ASRLVSGNSPLHEELEEELAEWKGTE-AALLFSS-GYLANVGVI 93 (360)
T ss_pred EEecccCCcccCCCCHHHHHHHHHHHHh-cCCCCC-CcCcccCCcHHHHHHHHHHHHHhCCC-CEEEECc-hHHHHHHHH
Confidence 44544443 3558999999998865 222211 11111222356788999999999963 4455555 567776777
Q ss_pred HHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC----CceEEEEecccccccc
Q 040741 136 KGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP----DTGLISVMAVNNEIGV 211 (457)
Q Consensus 136 ~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~----~t~li~i~~~~~~~G~ 211 (457)
.++. ++|++|++..++|+++...++.. |.+++.++. +|++++++.+++ ++++|++++++|++|.
T Consensus 94 ~~~~----~~gd~v~~~~~~~~~~~~~~~~~---g~~~~~~~~-----~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~ 161 (360)
T TIGR00858 94 SALV----GKGDLILSDALNHASLIDGCRLS---GARVRRYRH-----NDVEHLERLLEKNRGERRKLIVTDGVFSMDGD 161 (360)
T ss_pred HHhC----CCCCEEEEEccccHHHHHHHHhc---CCceEEecC-----CCHHHHHHHHHHcccCCCeEEEEeCCccCCCC
Confidence 7776 89999999999999998876655 888887763 488999998864 5789999999999999
Q ss_pred ccChHHHHHHHHhcCCcEEEehhhhcCCCccc---------CCCCcccEEEeccccccCCCCceEEEEecCCCccccccc
Q 040741 212 IQPMEEIGQICKEFKIPFHTDAAQALGKIPVD---------VEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLI 282 (457)
Q Consensus 212 ~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~---------~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~ 282 (457)
..|+++|.++|+++|+++++|++|+.+..+.+ +...+.|+++.|++|.+|+.| |+++++++..+++....
T Consensus 162 ~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g-G~~~~~~~~~~~~~~~~ 240 (360)
T TIGR00858 162 IAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG-AYVAGSQALIDYLINRA 240 (360)
T ss_pred CcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC-cEEEcCHHHHHHHHHhC
Confidence 99999999999999999999999986643221 222357899999999989887 89988776554443221
Q ss_pred cCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcc-c
Q 040741 283 NGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAY-V 361 (457)
Q Consensus 283 ~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 361 (457)
..+ ...+..+...++++.++++.... .++..++++++.+++.+.|.+ + ++.+..+ ..+++.+.++. .
T Consensus 241 ~~~-----~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~----~~~~~~~~~~~~~ 308 (360)
T TIGR00858 241 RTL-----IFSTALPPAVAAAALAALELIQE-EPWRREKLLALIARLRAGLEA-L-GFTLMPS----CTPIVPVIIGDNA 308 (360)
T ss_pred ccc-----eecCCCCHHHHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHHHH-c-CCccCCC----CCCEEEEEeCCHH
Confidence 110 01123444555666677765543 467788999999999999998 5 4555432 13344455542 2
Q ss_pred cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHH
Q 040741 362 EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTV 427 (457)
Q Consensus 362 ~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~ 427 (457)
+..++...| +||.+.++..+.. ....++|||+++.+++++|+++++++|+
T Consensus 309 ~~~~~~~~l~~~gI~v~~~~~~~~----------------~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 309 SALALAEELQQQGIFVGAIRPPTV----------------PAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred HHHHHHHHHHHCCeeEeeeCCCCC----------------CCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 345566655 6888876532211 1123689999999999999999999874
No 91
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.96 E-value=2.6e-26 Score=230.04 Aligned_cols=323 Identities=16% Similarity=0.160 Sum_probs=222.2
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCE
Q 040741 69 VDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRH 148 (457)
Q Consensus 69 ~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~ 148 (457)
.+|++++++.+.+... +...+++..+ +...+.+.++++.+++++|.+ + .++.++|++|+..++..+... .+++.
T Consensus 61 ~~p~v~~a~~~~~~~~-~~~~~~s~~~-~~~~~~~~~Le~~la~~~g~~-~-~i~~~sG~~a~~~~i~~l~~~--~~g~~ 134 (410)
T PRK13392 61 QHPDVIGAMVDALDRY-GAGAGGTRNI-SGTSHPHVLLERELADLHGKE-S-ALLFTSGYVSNDAALSTLGKL--LPGCV 134 (410)
T ss_pred CCHHHHHHHHHHHHHc-CCCCchhhhc-ccChHHHHHHHHHHHHHhCCC-C-EEEECcHHHHHHHHHHHHhcC--CCCCE
Confidence 5799999999988654 2211112111 122245789999999999964 3 555556788988888876521 37889
Q ss_pred EEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhc----CCCceEEEEeccccccccccChHHHHHHHHh
Q 040741 149 VITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAI----RPDTGLISVMAVNNEIGVIQPMEEIGQICKE 224 (457)
Q Consensus 149 vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i----~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~ 224 (457)
|+++..+|.+...+++.. |.++..++.+ |++++++.+ .+++++|++++++||+|.+.|+++|.++|++
T Consensus 135 vi~~~~~h~s~~~~~~~~---g~~~~~~~~~-----d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~ 206 (410)
T PRK13392 135 ILSDALNHASMIEGIRRS---GAEKQVFRHN-----DLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIEAICDLADR 206 (410)
T ss_pred EEEehhhhHHHHHHHHHc---CCeEEEEeCC-----CHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHHHHHHHHHH
Confidence 999888999988766554 8888777643 455555544 3578999999999999999999999999999
Q ss_pred cCCcEEEehhhhcCCCccc---C----C-CCcccEEEeccccccCCCCceEEEEecCCCccccccccCCccccccccCCC
Q 040741 225 FKIPFHTDAAQALGKIPVD---V----E-KWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTL 296 (457)
Q Consensus 225 ~~v~li~D~a~~~g~~~~~---~----~-~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 296 (457)
||+++++|++|+.|..... + . ...+|+++.|++|.+|..| |+++++++.++.+.....++ ......
T Consensus 207 ~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G-G~~~~~~~~~~~l~~~~~~~-----~~s~~~ 280 (410)
T PRK13392 207 YNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG-GYIAASADLIDFVRSFAPGF-----IFTTAL 280 (410)
T ss_pred cCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc-chhhcCHHHHHHHHHhCcch-----hccCcC
Confidence 9999999999996543111 0 0 1146899999999888776 88888776555444322211 112234
Q ss_pred ChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccc-cchHHHhcc---cC
Q 040741 297 PTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYV-EGESLLMGL---KE 372 (457)
Q Consensus 297 ~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l---~~ 372 (457)
++..++++.++++.... .....++++++++++.+.|++ + ++.+..+. .+++.+.+... ...++...| +|
T Consensus 281 ~~~~~~a~~aaL~~~~~-~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~----~~~~~i~~~~~~~~~~~~~~L~~~~G 353 (410)
T PRK13392 281 PPAVAAGATAAIRHLKT-SQTERDAHQDRVAALKAKLNA-N-GIPVMPSP----SHIVPVMVGDPTLCKAISDRLMSEHG 353 (410)
T ss_pred CHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHH-c-CCCCCCCC----CCEEEEEeCCHHHHHHHHHHHHHhCC
Confidence 55667777778876543 345567788899999999988 4 66554321 23333444321 234566554 48
Q ss_pred eEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 373 VAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 373 i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
|.+.+...... ..+..+|||+++..+|++|+|+++++|+++.+++.
T Consensus 354 I~v~~~~~p~~----------------~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~~ 399 (410)
T PRK13392 354 IYIQPINYPTV----------------PRGTERLRITPTPLHDDEDIDALVAALVAIWDRLE 399 (410)
T ss_pred EEEeeeCCCCC----------------CCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHcC
Confidence 88876432110 11236899999999999999999999999877653
No 92
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.96 E-value=3.5e-26 Score=228.96 Aligned_cols=331 Identities=15% Similarity=0.149 Sum_probs=228.9
Q ss_pred EecCCCCC----CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHH
Q 040741 60 YLDMQATT----PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSI 135 (457)
Q Consensus 60 ~l~~~~~~----~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al 135 (457)
++++.++. ..+|++.+++.+.+......+ +++ ...+...+.+.++++.+++++|.+ + .++.++|++|+..++
T Consensus 48 ~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~-~~s-~~~~g~~~~~~~l~~~la~~~g~~-~-~~~~~sG~~an~~ai 123 (407)
T PRK09064 48 VTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGA-GGT-RNISGTNHYHVELERELADLHGKE-A-ALVFTSGYVSNDATL 123 (407)
T ss_pred EEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCC-CCc-CcCccCHHHHHHHHHHHHHHhCCC-c-EEEECcHHHHHHHHH
Confidence 44555554 457899999999887642221 111 111223468899999999999963 3 566666888999888
Q ss_pred HHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcC----CCceEEEEecccccccc
Q 040741 136 KGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIR----PDTGLISVMAVNNEIGV 211 (457)
Q Consensus 136 ~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~----~~t~li~i~~~~~~~G~ 211 (457)
..+... .+++.|+.+...|.+....++.. |.++..++.+ |++++++.++ +++++|++++++|++|.
T Consensus 124 ~~l~~~--~~~~~i~~~~~~h~s~~~~~~~~---~~~~~~~~~~-----d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~ 193 (407)
T PRK09064 124 STLAKL--IPDCVIFSDELNHASMIEGIRRS---RCEKHIFRHN-----DVAHLEELLAAADPDRPKLIAFESVYSMDGD 193 (407)
T ss_pred HHHhCC--CCCCEEEEeCcchHHHHHHHHHc---CCcEEEECCC-----CHHHHHHHHHhccCCCCeEEEEeCCCCCCcc
Confidence 877632 36788888888898888777655 7777666543 7888888775 56889999999999999
Q ss_pred ccChHHHHHHHHhcCCcEEEehhhhcCCC-cc-----cCCC--CcccEEEeccccccCCCCceEEEEecCCCcccccccc
Q 040741 212 IQPMEEIGQICKEFKIPFHTDAAQALGKI-PV-----DVEK--WNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLIN 283 (457)
Q Consensus 212 ~~~l~~i~~l~~~~~v~li~D~a~~~g~~-~~-----~~~~--~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~ 283 (457)
+.|+++|.++|++||+++++|++|+.|.. +. .... ..+|+++.|++|.+|..| |+++++++.++.+.....
T Consensus 194 ~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G-G~~~~~~~~~~~l~~~~~ 272 (407)
T PRK09064 194 IAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG-GYIAGSAALVDAVRSYAP 272 (407)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC-ceEecCHHHHHHHHHhCc
Confidence 99999999999999999999999985532 10 1011 146899999999999887 898887765554433222
Q ss_pred CCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcc-cc
Q 040741 284 GGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAY-VE 362 (457)
Q Consensus 284 ~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 362 (457)
++ ......++..++++.++++.+... ....++.+++++++.+.|.+ + ++.+.++. .+++.+.+.. ..
T Consensus 273 ~~-----~~t~~~~~~~~~aa~~al~~~~~~-~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~----~~iv~i~~~~~~~ 340 (407)
T PRK09064 273 GF-----IFTTSLPPAIAAAALASIRHLKES-NEERERHQERAAKLKAALDA-A-GIPVMPNE----SHIVPVMVGDPEK 340 (407)
T ss_pred cc-----cccCcCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHH-c-CCCCCCCC----CCEEEEEeCCHHH
Confidence 11 112244555666666778776543 44567888999999999988 4 66554421 3344444432 12
Q ss_pred chHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 363 GESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 363 ~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
..++...| +||.+.+...... +.+..++||+++..+|++|+++++++|+++++++
T Consensus 341 ~~~l~~~L~~~~gi~v~~~~~p~~----------------~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 341 CKKASDMLLEEHGIYVQPINYPTV----------------PRGTERLRITPTPFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred HHHHHHHHHHhCCEEEeeECCCCC----------------CCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 34565554 3888865321110 1123689999999999999999999999988754
No 93
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.96 E-value=3.2e-26 Score=228.76 Aligned_cols=335 Identities=17% Similarity=0.167 Sum_probs=233.0
Q ss_pred CCCcEEecCCCCC-----CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCC------CCCcEEE
Q 040741 55 AGRPLYLDMQATT-----PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGA------SPKEIIF 123 (457)
Q Consensus 55 ~~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~------~~~~i~~ 123 (457)
+.+.+.|..+.+. ++++++.+++.+.+.....+ +|.......++++.++++++. +++++++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~--------~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~ 101 (403)
T TIGR01265 30 EKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFN--------GYAPSVGALAAREAVAEYLSSDLPGKLTADDVVL 101 (403)
T ss_pred CCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCC--------CCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEE
Confidence 3566788777653 67799999999887542111 111123466788999999874 5678999
Q ss_pred eCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC--CCCCCCHHHHHHhcCCCceEEE
Q 040741 124 TSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG--ADGIVNLDELRAAIRPDTGLIS 201 (457)
Q Consensus 124 t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~le~~i~~~t~li~ 201 (457)
|+|+|+|+.+++.++. ++|++|+++.++|..+...++.. |.+++.++.+ .++.+|++++++++++++++++
T Consensus 102 t~G~t~al~~~~~~l~----~~gd~Vlv~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~ 174 (403)
T TIGR01265 102 TSGCSQAIEICIEALA----NPGANILVPRPGFPLYDTRAAFS---GLEVRLYDLLPEKDWEIDLDGLEALADEKTVAIV 174 (403)
T ss_pred ecChHHHHHHHHHHhC----CCCCEEEEeCCCchhHHHHHHHc---CCEEEEecCCcccCCccCHHHHHHHhCcCccEEE
Confidence 9999999999999998 89999999999998776665544 9999998875 3457999999999999999999
Q ss_pred EeccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCCC---c-cc---CCCCcccEEEeccccccCCCC--ceEEE
Q 040741 202 VMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKI---P-VD---VEKWNVSLMSLSGHKIYGPKG--VGALY 269 (457)
Q Consensus 202 i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~---~-~~---~~~~~~Di~~~s~~K~~g~~G--~G~l~ 269 (457)
+++++||+|.+.+ +++|.++|+++|+++|+|++++--.. + .. +.....-+++.|++|.|+.+| +|+++
T Consensus 175 i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v 254 (403)
T TIGR01265 175 VINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWII 254 (403)
T ss_pred EecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEEE
Confidence 9999999999987 78899999999999999999873211 1 11 111112467889999877656 99999
Q ss_pred Eec--CCCcc-ccccccCCccccccccCCCChhHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCC
Q 040741 270 MRR--RPRIR-VEPLINGGGQERGIRSGTLPTPLIVGFGSACEI-AKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGS 345 (457)
Q Consensus 270 ~~~--~~~~~-~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 345 (457)
+.+ +.... +......... . ...++.....++..+++. ....+++..++++++++.+.+.|+. ++++.+..+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~p 329 (403)
T TIGR01265 255 IHDPHGIFRDTVLQGLKNLLQ---R-ILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKD-IPGLVCPKP 329 (403)
T ss_pred EeCchhhhHHHHHHHHHHHhh---h-hcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc-CCCceecCC
Confidence 853 22111 1111100000 0 112344444555555543 2234777888888899999999988 677664432
Q ss_pred CCCcccceEEEEEcc------ccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCH
Q 040741 346 MERRYIGNLNLSFAY------VEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTE 416 (457)
Q Consensus 346 ~~~~~~~~~~~~~~~------~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~ 416 (457)
.. ..++.+.++. .+..++...+ +||.+.+|..+.. .++|||+++. ++
T Consensus 330 -~~--g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~-------------------~~~iRis~~~--~~ 385 (403)
T TIGR01265 330 -EG--AMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGL-------------------PNWVRITITV--PE 385 (403)
T ss_pred -Cc--eeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCC-------------------CCeEEEEecC--CH
Confidence 21 3344444432 1345565553 5999998875421 2799999985 57
Q ss_pred HHHHHHHHHHHHHHHHH
Q 040741 417 AEVDRAIELTVKQVEKL 433 (457)
Q Consensus 417 edid~~~~~l~~~~~~~ 433 (457)
+.++..+++|.++++++
T Consensus 386 ~~l~~~l~~l~~~~~~~ 402 (403)
T TIGR01265 386 SMLEEACSRIKEFCERH 402 (403)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 88999999998888653
No 94
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.96 E-value=4.7e-26 Score=228.10 Aligned_cols=333 Identities=16% Similarity=0.161 Sum_probs=230.5
Q ss_pred cCCCcEEecCCCCC-----CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhC------------C
Q 040741 54 IAGRPLYLDMQATT-----PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIG------------A 116 (457)
Q Consensus 54 ~~~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g------------~ 116 (457)
...+.+.|..+.+. .+++.+.+++.+.+... . .. +|.......++++.++++++ +
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~--~----~~--~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~ 102 (412)
T PTZ00433 31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQ--E----CN--GYPPTVGSPEAREAVATYWRNSFVHKESLKSTI 102 (412)
T ss_pred CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcC--C----CC--CCCCCCCcHHHHHHHHHHHHhhccccccccCCC
Confidence 34555777766664 36788899988876531 0 00 11111235567777777765 5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC--CCCCCHHHHHHhcC
Q 040741 117 SPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA--DGIVNLDELRAAIR 194 (457)
Q Consensus 117 ~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~le~~i~ 194 (457)
+++++++|+|+++++.+++.++. ++|++|+++.++|..+...++.. |++++.++.+. ++.+|+++++++++
T Consensus 103 ~~~~i~it~G~~~al~~~~~~~~----~~gd~vlv~~P~y~~~~~~~~~~---g~~~~~i~~~~~~~~~~d~~~l~~~~~ 175 (412)
T PTZ00433 103 KKDNVVLCSGVSHAILMALTALC----DEGDNILVPAPGFPHYETVCKAY---GIEMRFYNCRPEKDWEADLDEIRRLVD 175 (412)
T ss_pred ChhhEEEeCChHHHHHHHHHHhc----CCCCEEEEccCCcccHHHHHHHc---CCEEEEEecCccccCcCCHHHHHHHhc
Confidence 67889999999999999999988 89999999999999988776665 99999999863 45789999999999
Q ss_pred CCceEEEEeccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCCC---c-c---cCCCCcccEEEeccccccCCCC
Q 040741 195 PDTGLISVMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKI---P-V---DVEKWNVSLMSLSGHKIYGPKG 264 (457)
Q Consensus 195 ~~t~li~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~---~-~---~~~~~~~Di~~~s~~K~~g~~G 264 (457)
+++++|++++++||||.+.+ +++|.++|+++|++|++|+++.--.. . . .+.....-+++.|++|.+|.+|
T Consensus 176 ~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pG 255 (412)
T PTZ00433 176 DRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPG 255 (412)
T ss_pred cCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCC
Confidence 89999999999999999887 67788999999999999999863211 1 1 1111112377889999887665
Q ss_pred --ceEEEEe-c-----CCCccccccccCCccccccccCCCChhHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHHhh
Q 040741 265 --VGALYMR-R-----RPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEI-AKKEMDYDHKRITALHDRLLNGIKE 335 (457)
Q Consensus 265 --~G~l~~~-~-----~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~ 335 (457)
+||+++. + +.++.+..... . ....+.....++..++.. ....+++..++++++++.+.+.|++
T Consensus 256 lRlG~~i~~~p~~~~~~~~~~~~~~~~-------~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 327 (412)
T PTZ00433 256 WRLGWLLLVDPHGNGGDFLDGMKRLGM-------L-VCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGE 327 (412)
T ss_pred eeEEEEEEeCCcccHHHHHHHHHHHhh-------c-cCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999973 2 12222221110 0 113344444444444432 2234777888888999999999987
Q ss_pred cCCCeEEeCCCCCcccceEEEEEcc------ccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeE
Q 040741 336 KLDGVVVNGSMERRYIGNLNLSFAY------VEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSI 406 (457)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~i 406 (457)
+.++.+..+ .. +.++.+.++. .+..++...+ +||.+.+|..|.. .+++
T Consensus 328 -~~~~~~~~p-~g--g~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~-------------------~~~i 384 (412)
T PTZ00433 328 -CIGLSPTMP-RG--SMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHM-------------------PGFT 384 (412)
T ss_pred -CCCCcccCC-Ce--eEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCC-------------------CCeE
Confidence 556554432 11 3334444432 1345565554 4899998875421 2799
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 407 RFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 407 Ri~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
||+++. .++++++.+++|.++++..+
T Consensus 385 Ris~~~--~~e~l~~al~~l~~~~~~~~ 410 (412)
T PTZ00433 385 RLTISR--PVEVLREAVERIKAFCERHK 410 (412)
T ss_pred EEEecC--CHHHHHHHHHHHHHHHHHhc
Confidence 999985 48899999999999988654
No 95
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.96 E-value=1.1e-26 Score=232.49 Aligned_cols=338 Identities=18% Similarity=0.237 Sum_probs=234.3
Q ss_pred CCCCCCCCHHHHHHHHHHHhhcc--CCCCCCccchhhhHHHHHHH-HHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhh
Q 040741 63 MQATTPVDPRVLDAMLPFYLSRY--GNPHSRTHLFGWESEVAVET-ARSQIADLIGASPKEIIFTSGATESNNVSIKGVM 139 (457)
Q Consensus 63 ~~~~~~~~~~v~~a~~~~~~~~~--~~p~~~~~~~~~~~~~~~~~-~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~ 139 (457)
++++++++++|.+++.+++...+ ++|+++ +..+....+.+++ .++.+++++|++..+++++ |||+|+.+++.++.
T Consensus 25 ~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~-~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~-sgt~a~~~~l~~l~ 102 (402)
T cd00378 25 IASENFTSPAVMEAMGSDLTNKYAEGYPGKR-YYGGCEYVDEIEDLAIERAKKLFGAEYANVQPH-SGSQANLAVYFALL 102 (402)
T ss_pred eccCCcCCHHHHHHhcccccccccCCCCCCc-ccCCchHHHHHHHHHHHHHHHHhCCCceeeecC-CcHHHHHHHHHHhc
Confidence 56777899999999998875555 566553 2334444444555 6678889999976545544 57899999999997
Q ss_pred hhhcCCCCEEEEcCCCCcchHHHHHH--HHhcCcEEEEEeCCC---CCCCCHHHHHHhcC-CCceEEEEecccccccccc
Q 040741 140 HFYKDKKRHVITTQTEHKCVLDSCRH--LQQEGFEITYLPVGA---DGIVNLDELRAAIR-PDTGLISVMAVNNEIGVIQ 213 (457)
Q Consensus 140 ~~~~~~g~~vi~~~~~h~~~~~~~~~--~~~~G~~v~~v~~~~---~~~~d~~~le~~i~-~~t~li~i~~~~~~~G~~~ 213 (457)
++||+|+++.++|+++...... ++..|.++..++.+. ++.+|+++++++++ +++++++++++++ |...
T Consensus 103 ----~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~--~~~~ 176 (402)
T cd00378 103 ----EPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAY--PRPI 176 (402)
T ss_pred ----CCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCccc--CCCc
Confidence 8999999999999877544221 334487777776642 58899999999985 6788888877754 5778
Q ss_pred ChHHHHHHHHhcCCcEEEehhhhcCCC-----cccCCCCcccEEEecccccc-CCCCceEEEEec-CCCccccccccCCc
Q 040741 214 PMEEIGQICKEFKIPFHTDAAQALGKI-----PVDVEKWNVSLMSLSGHKIY-GPKGVGALYMRR-RPRIRVEPLINGGG 286 (457)
Q Consensus 214 ~l~~i~~l~~~~~v~li~D~a~~~g~~-----~~~~~~~~~Di~~~s~~K~~-g~~G~G~l~~~~-~~~~~~~~~~~~~~ 286 (457)
++++|.++|+++|+++++|++|..|.. +..+. ++|++++|+||++ |++| |+++.++ +..+++......+
T Consensus 177 ~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~~dv~~~s~sK~l~G~~g-g~i~~~~~~~~~~l~~~~~~~- 252 (402)
T cd00378 177 DFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--GADVVTTTTHKTLRGPRG-GLILTRKGELAKKINSAVFPG- 252 (402)
T ss_pred CHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--CCcEEEeccccCCCCCCc-eEEEeccHHHHHHHHHHhCcc-
Confidence 999999999999999999999866532 22232 5799999999955 6775 7777766 5555543322111
Q ss_pred cccccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEc--cccc
Q 040741 287 QERGIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFA--YVEG 363 (457)
Q Consensus 287 ~~~~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 363 (457)
..+++....+.++..++..... ++++..++++++++++.+.|.+ + ++.+...+.. ...+.+.++ ..+.
T Consensus 253 -----~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~--~~~v~v~~~~~~~~~ 323 (402)
T cd00378 253 -----LQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKE-R-GFKVVSGGTD--NHLVLVDLRPKGITG 323 (402)
T ss_pred -----ccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHh-C-CCeEeecCCC--CeEEEEeCCccCCCH
Confidence 1234555666666666765554 5678888999999999999998 5 7776533322 344445554 2233
Q ss_pred hHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCC----CHHHHHHHHHHHHHHHHHHH
Q 040741 364 ESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFT----TEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 364 ~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~----t~edid~~~~~l~~~~~~~~ 434 (457)
..+...| +||.+..+...... ........+||+++..+ +.+|++++++.|++++++-.
T Consensus 324 ~~~~~~l~~~gI~v~~~~~p~~~-------------~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~~~ 387 (402)
T cd00378 324 KAAEDALEEAGITVNKNTLPWDP-------------SSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKDAE 387 (402)
T ss_pred HHHHHHHHHcCcEEcCCcCCCCC-------------CCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhccc
Confidence 4444444 58888764321110 00123478999987744 68999999999999886544
No 96
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.96 E-value=4.1e-26 Score=227.06 Aligned_cols=328 Identities=18% Similarity=0.191 Sum_probs=227.6
Q ss_pred CcEEecCCCC---C-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHH
Q 040741 57 RPLYLDMQAT---T-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNN 132 (457)
Q Consensus 57 ~~i~l~~~~~---~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~ 132 (457)
+.-|+|+.++ + ..+|++.+++.+.+... +.+.. .+.......+...++++.++++++. + +.+++++|++++.
T Consensus 38 g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~-~~~~~-~~~~~~g~~~~~~~l~~~la~~~~~-~-~~i~~~~g~~~~~ 113 (385)
T PRK05958 38 GRRMLNFASNDYLGLARHPRLIAAAQQAARRY-GAGSG-GSRLVTGNSPAHEALEEELAEWFGA-E-RALLFSSGYAANL 113 (385)
T ss_pred CceEEEeeCCCcccCCCCHHHHHHHHHHHHhc-CCCCC-CcCcccCCcHHHHHHHHHHHHHhCC-C-cEEEECcHHHHHH
Confidence 3445565544 2 35789999999998652 22111 1111112235788899999999995 3 3566667888888
Q ss_pred HHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC---CceEEEEecccccc
Q 040741 133 VSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP---DTGLISVMAVNNEI 209 (457)
Q Consensus 133 ~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~---~t~li~i~~~~~~~ 209 (457)
.+++.+. ++|++|+++.++|+++..++... |.+++.++.. |++++++++++ .+.++++++++|++
T Consensus 114 ~~l~~~~----~~gd~V~~~~~~~~~~~~~~~~~---g~~~~~~~~~-----d~~~l~~~i~~~~~~~~lvi~~~~~~~~ 181 (385)
T PRK05958 114 AVLTALA----GKGDLIVSDKLNHASLIDGARLS---RARVRRYPHN-----DVDALEALLAKWRAGRALIVTESVFSMD 181 (385)
T ss_pred HHHHHhC----CCCCEEEEeCccCHHHHHHHHhc---CCceEEeCCC-----CHHHHHHHHHhccCCCeEEEEEecccCC
Confidence 7777776 89999999999999998876655 8888887653 88999998865 36788888899999
Q ss_pred ccccChHHHHHHHHhcCCcEEEehhhhcCCCcc---------cCCCCcccEEEeccccccCCCCceEEEEecCCCccccc
Q 040741 210 GVIQPMEEIGQICKEFKIPFHTDAAQALGKIPV---------DVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEP 280 (457)
Q Consensus 210 G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~---------~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~ 280 (457)
|...++++|.++|++||+++|+|++|+.|.... .+.....++++.|++|.+|+.| |+++.+++..+.+..
T Consensus 182 G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-g~~~~~~~~~~~~~~ 260 (385)
T PRK05958 182 GDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG-AAVLGSETLIDYLIN 260 (385)
T ss_pred CCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC-cEEEcCHHHHHHHHH
Confidence 999999999999999999999999997653321 1222234588899999889887 888877654443321
Q ss_pred cccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcc
Q 040741 281 LINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAY 360 (457)
Q Consensus 281 ~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (457)
..... ...+..++.+++++.++++..... ++..+++.++.+++.+.|.+ + ++.+..+ ..+++.+.++.
T Consensus 261 ~~~~~-----~~~~~~~~~~~aa~~aal~~~~~~-~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~----~~~~~~~~~~~ 328 (385)
T PRK05958 261 RARPF-----IFTTALPPAQAAAARAALRILRRE-PERRERLAALIARLRAGLRA-L-GFQLMDS----QSAIQPLIVGD 328 (385)
T ss_pred hCccc-----eecCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHH-c-CCCcCCC----CCCEEEEEeCC
Confidence 11100 112234555666666777766543 57788999999999999988 4 4554332 23445555543
Q ss_pred -ccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Q 040741 361 -VEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQ 429 (457)
Q Consensus 361 -~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~ 429 (457)
.+..++...| +||.+.++..... ..+++++||+++.+++++|+++++++|+++
T Consensus 329 ~~~~~~~~~~l~~~gI~v~~~~~~~~----------------~~~~~~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 329 NERALALAAALQEQGFWVGAIRPPTV----------------PAGTSRLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred HHHHHHHHHHHHHCCceEecccCCCC----------------CCCCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence 2344566666 6888865321110 112368999999999999999999999875
No 97
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.96 E-value=2.1e-26 Score=229.06 Aligned_cols=332 Identities=14% Similarity=0.124 Sum_probs=228.6
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh----CC--C-CCcEEEeCCh
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI----GA--S-PKEIIFTSGA 127 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~----g~--~-~~~i~~t~g~ 127 (457)
.+.+.|..+.+. ..++.+.+++.+....... .|+ ......++++.+++++ |. + ++++++|+|+
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~Y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~ 100 (391)
T PRK07309 30 PGILKLTLGEPDFTTPDHVKEAAKRAIDANQS-------HYT--GMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGA 100 (391)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-------CCC--CCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCh
Confidence 456777776666 4567788888877653210 011 1122456666666665 33 2 3679999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCC-CCCCHHHHHHhcCC---CceEEEEe
Q 040741 128 TESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGAD-GIVNLDELRAAIRP---DTGLISVM 203 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~-~~~d~~~le~~i~~---~t~li~i~ 203 (457)
|+|+++++.++. ++|+.|++..+.|..+...++.. |.+++.++.+.+ +.+|+++++++++. ++++++++
T Consensus 101 ~~al~~~~~~~~----~~gd~vl~~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~ 173 (391)
T PRK07309 101 TEALSASLTAIL----EPGDKVLLPAPAYPGYEPIVNLV---GAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILN 173 (391)
T ss_pred HHHHHHHHHHhc----CCCCEEEEeCCCCcchHHHHHHc---CCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEE
Confidence 999999999987 89999999999999988777665 999999998654 46899999999864 58899999
Q ss_pred ccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCCC----cccCCC--CcccEEEeccccccCCCC--ceEEEEec
Q 040741 204 AVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKI----PVDVEK--WNVSLMSLSGHKIYGPKG--VGALYMRR 272 (457)
Q Consensus 204 ~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~----~~~~~~--~~~Di~~~s~~K~~g~~G--~G~l~~~~ 272 (457)
+++||||.+++ +++|+++|++||+++++|++++.... ...+.. .+..+++.|++|.+|.+| +|++++++
T Consensus 174 ~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~ 253 (391)
T PRK07309 174 YPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAPA 253 (391)
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeCH
Confidence 99999999987 78889999999999999999874221 111111 123488899999888666 99999988
Q ss_pred CCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccc
Q 040741 273 RPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIG 352 (457)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 352 (457)
+.++++..... +...+++.....++..+++..........++++++++++.+.|++ . ++.+..+. . ..
T Consensus 254 ~~~~~~~~~~~-------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~~p~-g--g~ 321 (391)
T PRK07309 254 EFTAQLIKSHQ-------YLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTD-L-GFKIIKPD-G--AF 321 (391)
T ss_pred HHHHHHHHHHh-------hcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHH-C-CCeecCCC-e--eE
Confidence 76666553321 111134444444444444322222345567778888889999988 4 66655432 1 12
Q ss_pred eEEEEEcc-c--cchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHH
Q 040741 353 NLNLSFAY-V--EGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELT 426 (457)
Q Consensus 353 ~~~~~~~~-~--~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l 426 (457)
.+.+.++. . +...+...+ +||.+.+|..+.. ...++|||+++. +.++++.++++|
T Consensus 322 ~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~-----------------~~~~~iRi~~~~--~~~~l~~~i~~l 382 (391)
T PRK07309 322 YIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFGP-----------------YGEGYVRLSYAA--SMETIKEAMKRL 382 (391)
T ss_pred EEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhCC-----------------CCCCEEEEEecC--CHHHHHHHHHHH
Confidence 22334432 1 234555443 6999998865422 123799999985 579999999999
Q ss_pred HHHHHHHH
Q 040741 427 VKQVEKLR 434 (457)
Q Consensus 427 ~~~~~~~~ 434 (457)
++++++++
T Consensus 383 ~~~~~~~~ 390 (391)
T PRK07309 383 KEYMEEHA 390 (391)
T ss_pred HHHHHhhc
Confidence 99987764
No 98
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.96 E-value=4.1e-26 Score=227.35 Aligned_cols=319 Identities=19% Similarity=0.213 Sum_probs=224.3
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHH-HHhcCc
Q 040741 93 HLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRH-LQQEGF 171 (457)
Q Consensus 93 ~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~-~~~~G~ 171 (457)
+.|+....+.+.++|+.++++.|.+. +++++|||+|+++++.++. ++||+||++..+|.+....+.. +...|+
T Consensus 56 ~~y~R~~~p~~~~le~~lA~l~g~~~--av~~sSGt~Al~~al~~ll----~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi 129 (433)
T PRK08134 56 HVYSRISNPTVAVLEERVAALEGGVG--AIATASGQAALHLAIATLM----GAGSHIVASSALYGGSHNLLHYTLRRFGI 129 (433)
T ss_pred ceeecCcChHHHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHHh----CCCCEEEEeCCccHHHHHHHHHHHhhCCe
Confidence 33444445789999999999999875 8999999999999999886 8999999999999988776654 456799
Q ss_pred EEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccE
Q 040741 172 EITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSL 251 (457)
Q Consensus 172 ~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di 251 (457)
++++++++ |+++++++|+++|++|++++++||+|.+.|+++|.++|+++|+++++|++++.+.....+ ..++|+
T Consensus 130 ~v~~vd~~-----d~~~l~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~~pl-~~GaD~ 203 (433)
T PRK08134 130 ETTFVKPG-----DIDGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLLRPF-EHGADL 203 (433)
T ss_pred EEEEECCC-----CHHHHHHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccCCch-hcCCCE
Confidence 99999975 899999999999999999999999999999999999999999999999999988765444 678999
Q ss_pred EEeccccccCCCC--ceEEEEecCC--------CccccccccCCc-c--cc----------------ccccCCCChhHHH
Q 040741 252 MSLSGHKIYGPKG--VGALYMRRRP--------RIRVEPLINGGG-Q--ER----------------GIRSGTLPTPLIV 302 (457)
Q Consensus 252 ~~~s~~K~~g~~G--~G~l~~~~~~--------~~~~~~~~~~~~-~--~~----------------~~~~~t~~~~~~~ 302 (457)
++.|.||++|+.| +|.+++.... ...+.+...+++ . .. .......++..++
T Consensus 204 vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~ 283 (433)
T PRK08134 204 VYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMNAW 283 (433)
T ss_pred EEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHHHH
Confidence 9999999888766 5555543211 111222221110 0 00 0000111211111
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCC---------------CcccceEEEEEccc--cchH
Q 040741 303 GFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSME---------------RRYIGNLNLSFAYV--EGES 365 (457)
Q Consensus 303 al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~--~~~~ 365 (457)
-+.. -.+.++.++++..+++.++.+.|++ .|.+.-+..|. ..+++++.|.+++- ....
T Consensus 284 l~~~----gL~tl~~R~~~~~~nA~~la~~L~~-~p~V~~V~yP~l~~~p~~~~~~~~~~~g~gg~~s~~l~~~~~~~~~ 358 (433)
T PRK08134 284 QLLQ----GIETLPLRMERHVANTRKVVAFLAS-HPAVARVAHPELESHPDHALAKRLLPRGAGSVFSFDLKGGRAAGRK 358 (433)
T ss_pred HHhc----CCCcHHHHHHHHHHHHHHHHHHHHh-CCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEEecCCHHHHHH
Confidence 1111 1124788889999999999999998 78763322111 23577788887531 2345
Q ss_pred HHhccc--CeEecccCccC----CCCCCh----hHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHh
Q 040741 366 LLMGLK--EVAVSSGSACT----SASLEP----SYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLRE 435 (457)
Q Consensus 366 ~~~~l~--~i~~~~g~~~~----~~~~~~----~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~ 435 (457)
++..|+ .++.+-|...+ +....+ .-..+..|+.+ +.|||+++. ||+|.+++.|+++++..+.
T Consensus 359 f~~~l~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~----~liRlsvGl----E~~~dli~dl~~Al~~~~~ 430 (433)
T PRK08134 359 FIESLKLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGE----GTIRLSIGL----EDADDLIDDLKRALKAAEK 430 (433)
T ss_pred HHHhCCcceeccccCCCCceeeCCCccCcccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHHhhhh
Confidence 666663 44445555433 222211 11234577765 899999997 7899999999999987654
Q ss_pred c
Q 040741 436 M 436 (457)
Q Consensus 436 ~ 436 (457)
.
T Consensus 431 ~ 431 (433)
T PRK08134 431 A 431 (433)
T ss_pred c
Confidence 3
No 99
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.95 E-value=2.9e-26 Score=227.93 Aligned_cols=325 Identities=17% Similarity=0.171 Sum_probs=225.0
Q ss_pred CcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh----CC--CCC-cEEEeCChH
Q 040741 57 RPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI----GA--SPK-EIIFTSGAT 128 (457)
Q Consensus 57 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~----g~--~~~-~i~~t~g~T 128 (457)
+.+.|+.+.+. ++++.+.+++.+.+... ... .|+ ......++++.+++++ |. +++ ++++|+|++
T Consensus 32 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~Y~--~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~ 103 (385)
T PRK09276 32 DVISLGIGDPDLPTPDHIIEAMCKAVEDP--ENH----QYP--SYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSK 103 (385)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHhCC--CCC----CCC--CCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcH
Confidence 44667766655 46778888888877531 101 111 1112445666666665 43 555 599999999
Q ss_pred HHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC--CCCCCHHHHHHhcCCCceEEEEeccc
Q 040741 129 ESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA--DGIVNLDELRAAIRPDTGLISVMAVN 206 (457)
Q Consensus 129 ~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~le~~i~~~t~li~i~~~~ 206 (457)
+++.+++..++ ++||.|+++++.|+.+...++.. |.+++.++.+. +..+|++++++.+.+++++|++++++
T Consensus 104 ~~i~~~~~~~~----~~gd~Vl~~~P~y~~~~~~~~~~---g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~ 176 (385)
T PRK09276 104 EGIAHIPLAFV----NPGDVVLVPDPGYPVYKIGTIFA---GGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPN 176 (385)
T ss_pred HHHHHHHHHhC----CCCCEEEEcCCCCcChHHHHHHc---CCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCC
Confidence 99999999888 89999999999999988877666 99999999863 24579999999998899999999999
Q ss_pred cccccccC---hHHHHHHHHhcCCcEEEehhhhcCC----Cccc---CCC-CcccEEEeccccccCCCC--ceEEEEecC
Q 040741 207 NEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGK----IPVD---VEK-WNVSLMSLSGHKIYGPKG--VGALYMRRR 273 (457)
Q Consensus 207 ~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~----~~~~---~~~-~~~Di~~~s~~K~~g~~G--~G~l~~~~~ 273 (457)
||||.+.+ +++|+++|++||++|++|+++.... .... ... .+..+++.|++|.||.+| +|+++++++
T Consensus 177 NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~~ 256 (385)
T PRK09276 177 NPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNAD 256 (385)
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCCHH
Confidence 99999998 5788889999999999999997321 1111 111 234678899999998777 999998877
Q ss_pred CCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccce
Q 040741 274 PRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGN 353 (457)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 353 (457)
.++++...... .. .+.+.....++..++......+++..++++++++++.+.|++ + ++.+..+. . ..+
T Consensus 257 l~~~~~~~~~~------~~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~~-~--~~~ 324 (385)
T PRK09276 257 LIAGLGKVKSN------VD-SGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRK-L-GLEVEPPK-A--TFY 324 (385)
T ss_pred HHHHHHHHHhh------cc-CCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh-C-CCcccCCC-c--ceE
Confidence 66655443211 11 123333344444444333344677888889999999999998 5 66655432 1 222
Q ss_pred EEEEEc-cccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHH
Q 040741 354 LNLSFA-YVEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTV 427 (457)
Q Consensus 354 ~~~~~~-~~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~ 427 (457)
+.+.++ ..+..++...+ +||.+.+|..|.. ...+++||+++. ++++++.++++|.
T Consensus 325 ~~v~~~~~~~~~~l~~~ll~~~gi~v~~g~~f~~-----------------~~~~~~Ris~~~--~~~~l~~~l~~l~ 383 (385)
T PRK09276 325 VWAPVPKGYTSAEFATLLLDKAGVVVTPGNGFGE-----------------YGEGYFRIALTV--PDERIEEAVERIK 383 (385)
T ss_pred EEEECCCCCCHHHHHHHHHHhCCEEECCchhhCC-----------------CCCCeEEEEeCC--CHHHHHHHHHHHh
Confidence 344443 23456666654 4899998865421 112799999974 5777777777664
No 100
>PLN02721 threonine aldolase
Probab=99.95 E-value=1.6e-26 Score=227.33 Aligned_cols=322 Identities=18% Similarity=0.213 Sum_probs=218.3
Q ss_pred EEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHh
Q 040741 59 LYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGV 138 (457)
Q Consensus 59 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~ 138 (457)
+.|..+.++.+++.+.+++.+... +. . .+ ++ .+...++++.+++++|.+. ++++++||+++.+++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~a~~~~~~---~~--~-~~--~~--~~~~~~l~~~la~~~~~~~--~~~~~~Gs~a~~~~l~~~ 75 (353)
T PLN02721 8 VDLRSDTVTKPTDAMRAAMANAEV---DD--D-VL--GY--DPTALRLEEEMAKIFGKEA--ALFVPSGTMGNLISVLVH 75 (353)
T ss_pred hhhhcccccCCCHHHHHHHHhccC---CC--c-cc--CC--CHHHHHHHHHHHHHhCCce--eEEecCccHHHHHHHHHH
Confidence 455555556677888888865311 11 0 11 12 1347889999999999865 788888999988888877
Q ss_pred hhhhcC-CCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcC-------CCceEEEEecc-cccc
Q 040741 139 MHFYKD-KKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIR-------PDTGLISVMAV-NNEI 209 (457)
Q Consensus 139 ~~~~~~-~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~-------~~t~li~i~~~-~~~~ 209 (457)
. + +||+|+++.++|.+.......+...|++++.++.+.++.+|+++++++++ +++++|+++++ +||+
T Consensus 76 ~----~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~ 151 (353)
T PLN02721 76 C----DVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCG 151 (353)
T ss_pred c----cCCCCeEEEcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccC
Confidence 6 5 99999999999987776322334559999999988788899999999998 68899999885 5668
Q ss_pred ccccC---hHHHHHHHHhcCCcEEEehhhhcCCC---cccCC--CCcccEEEeccccccCCCCceEEEEecCCCcccccc
Q 040741 210 GVIQP---MEEIGQICKEFKIPFHTDAAQALGKI---PVDVE--KWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPL 281 (457)
Q Consensus 210 G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~---~~~~~--~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~ 281 (457)
|.+.| +++|.++|+++|+++|+|+++.++.. ..+.. ..++|.+++|+||+++++..++++.+++.++.+...
T Consensus 152 G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~~~~~~~~~~ 231 (353)
T PLN02721 152 GRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVGSVIVGSKSFIRKAKRL 231 (353)
T ss_pred CccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCceeeEEecCHHHHHhHHHH
Confidence 88877 78999999999999999999876532 11111 226789999999977654223466666555544333
Q ss_pred ccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEE-eCCCCCcccceEEEEEcc
Q 040741 282 INGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVV-NGSMERRYIGNLNLSFAY 360 (457)
Q Consensus 282 ~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 360 (457)
....+ +.+......++ .++..+.+.+++ .++..++.+++.+.|++ ++++.+ ...+. .+++.+.++.
T Consensus 232 ~~~~~-------~~~~~~~~~~~-~~~~~l~~~~~~-~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~---~~~~~~~~~~ 298 (353)
T PLN02721 232 RKTLG-------GGMRQVGVLAA-AALVALQENVPK-LEDDHKKAKLLAEGLNQ-IKGLRVNVAAVE---TNIVYFDITD 298 (353)
T ss_pred HHhcC-------CCeehhHHHHH-HHHHHHHHHHHH-HHHHHHHHHHHHHHHHh-CCCcEEecCCcc---ceEEEEEccC
Confidence 22110 11111111111 112122222222 34446678899999988 777754 33222 3455566653
Q ss_pred ---ccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 361 ---VEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 361 ---~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
.+...+...| +||.+.++. ..+||++++.+++++|+++++++|++++..
T Consensus 299 ~~~~~~~~~~~~L~~~gi~v~~~~-----------------------~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 299 GSRITAEKLCKSLEEHGVLLMPGN-----------------------SSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred CccccHHHHHHHHHhCCcEEecCC-----------------------CceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 3456677666 588877552 268999999889999999999999987653
No 101
>PRK08363 alanine aminotransferase; Validated
Probab=99.95 E-value=4.4e-26 Score=227.55 Aligned_cols=333 Identities=15% Similarity=0.166 Sum_probs=229.5
Q ss_pred CCcEEecCCCCC----CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh----C--CCCCcEEEeC
Q 040741 56 GRPLYLDMQATT----PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI----G--ASPKEIIFTS 125 (457)
Q Consensus 56 ~~~i~l~~~~~~----~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~----g--~~~~~i~~t~ 125 (457)
.+.+.|..+.+. ++++.+.+++.+.+.... + .|+ ......++++.+++++ | ++++++++|+
T Consensus 30 ~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~-~------~Y~--~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~ 100 (398)
T PRK08363 30 IKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGH-N------YYG--PSEGLPELREAIVKREKRKNGVDITPDDVRVTA 100 (398)
T ss_pred CCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCC-C------CCC--CCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeC
Confidence 356777776663 467889999988775320 0 111 1134566777777776 3 5778899999
Q ss_pred ChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEE-eCCC-CCCCCHHHHHHhcCCCceEEEEe
Q 040741 126 GATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYL-PVGA-DGIVNLDELRAAIRPDTGLISVM 203 (457)
Q Consensus 126 g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v-~~~~-~~~~d~~~le~~i~~~t~li~i~ 203 (457)
|+|+|+.+++.+++ ++||.|+++.++|+.+...++.. |..++.+ +.+. ++.+|++++++++++++++++++
T Consensus 101 G~~~al~~~~~~~~----~~gd~Vl~~~p~y~~~~~~~~~~---g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~ 173 (398)
T PRK08363 101 AVTEALQLIFGALL----DPGDEILIPGPSYPPYTGLVKFY---GGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIAVI 173 (398)
T ss_pred CHHHHHHHHHHHhC----CCCCEEEEcCCCCcchHHHHHHc---CCEEEEeccccccCCcCCHHHHHhhCCcceEEEEEE
Confidence 99999999999987 89999999999999998777655 8888777 4443 34689999999999999999999
Q ss_pred ccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCCCc------ccCCCCcccEEEeccccccCCCC--ceEEEE--
Q 040741 204 AVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKIP------VDVEKWNVSLMSLSGHKIYGPKG--VGALYM-- 270 (457)
Q Consensus 204 ~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~~------~~~~~~~~Di~~~s~~K~~g~~G--~G~l~~-- 270 (457)
+++||||.+.+ +++|.++|+++|+++++|++|+..... ..+.....-+++.|++|.|+.+| +|++++
T Consensus 174 ~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~ 253 (398)
T PRK08363 174 NPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVD 253 (398)
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeC
Confidence 99999999988 888999999999999999998742111 11111122466789999876554 899998
Q ss_pred ecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcc
Q 040741 271 RRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRY 350 (457)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 350 (457)
+++.++.+......... .. ...+.....++..++....+.+.+..++++++++++.+.|.+ ++++.+..+.
T Consensus 254 ~~~~~~~l~~~~~~~~~---~~-~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~-~~~~~~~~p~---- 324 (398)
T PRK08363 254 PEGKLAEVREAIDKLAR---IR-LCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNE-IPGISTTKPQ---- 324 (398)
T ss_pred cHHHHHHHHHHHHHHhc---cc-ccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhc-CCCCEecCCC----
Confidence 44443343332211000 01 134444444444555433345677788889999999999988 7777664431
Q ss_pred cceE-EEEEcc---ccchHHHhc-c--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHH
Q 040741 351 IGNL-NLSFAY---VEGESLLMG-L--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAI 423 (457)
Q Consensus 351 ~~~~-~~~~~~---~~~~~~~~~-l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~ 423 (457)
++++ .+.++. .+..+++.. + +||.+.+|..+.. ...++|||++. .+.++++.++
T Consensus 325 g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~-----------------~~~~~iRis~~--~~~~~l~~~l 385 (398)
T PRK08363 325 GAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFGE-----------------YGAGHFRLVFL--PPVEILEEAM 385 (398)
T ss_pred eEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCC-----------------CCCCeEEEEec--CCHHHHHHHH
Confidence 2322 224443 133444333 3 6899998864421 12379999996 3689999999
Q ss_pred HHHHHHHHH
Q 040741 424 ELTVKQVEK 432 (457)
Q Consensus 424 ~~l~~~~~~ 432 (457)
++|++++++
T Consensus 386 ~~l~~~~~~ 394 (398)
T PRK08363 386 DRFEEFMRE 394 (398)
T ss_pred HHHHHHHHH
Confidence 999988765
No 102
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.95 E-value=2.4e-26 Score=228.67 Aligned_cols=328 Identities=15% Similarity=0.157 Sum_probs=226.2
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh----C--CCCC-cEEEeCCh
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI----G--ASPK-EIIFTSGA 127 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~----g--~~~~-~i~~t~g~ 127 (457)
.+.+.|+.+.+. ++++.+.+++.+.+... . .. +|.......++++.+++++ | ++++ ++++|+|+
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~----~--~~--~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs 101 (388)
T PRK07366 30 KELIDLSLGSSDLPAPAHALEAIAQSLHDP----S--TH--GYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGS 101 (388)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhCc----c--cC--CCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCc
Confidence 345777766666 55788999988876421 0 01 1111123456777777766 4 5777 69999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCC--CCCCHHHHHHhcCCCceEEEEecc
Q 040741 128 TESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGAD--GIVNLDELRAAIRPDTGLISVMAV 205 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~--~~~d~~~le~~i~~~t~li~i~~~ 205 (457)
++++.+++.+++ ++||.|++..+.|+.+...++.. |.+++.++.+.+ ..+|++++++.+.+++++|+++++
T Consensus 102 ~~al~~~~~~l~----~~gd~Vlv~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p 174 (388)
T PRK07366 102 QEGTAHLPLAVL----NPGDFALLLDPGYPSHAGGVYLA---GGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYP 174 (388)
T ss_pred HHHHHHHHHHhC----CCCCEEEEcCCCCcchHHHHHhc---CCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCC
Confidence 999999999988 89999999999999998877766 999999998743 457888998888888999999999
Q ss_pred ccccccccC---hHHHHHHHHhcCCcEEEehhhhcCC----C-cccC---CCC-cccEEEeccccccCCCC--ceEEEEe
Q 040741 206 NNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGK----I-PVDV---EKW-NVSLMSLSGHKIYGPKG--VGALYMR 271 (457)
Q Consensus 206 ~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~----~-~~~~---~~~-~~Di~~~s~~K~~g~~G--~G~l~~~ 271 (457)
|||||.+.+ +++|+++|++||++||+|+++.--. . ...+ ... ..-+++.|++|.+|.+| +|+++++
T Consensus 175 ~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~ 254 (388)
T PRK07366 175 HNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGN 254 (388)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCC
Confidence 999999988 5567789999999999999987321 1 1111 111 12467889999887555 9999988
Q ss_pred cCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCccc
Q 040741 272 RRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYI 351 (457)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 351 (457)
++.++++........ .++.+ ....++.+++....+.+++.++.+++.++++.+.|++ + ++.+..+ . ..
T Consensus 255 ~~li~~l~~~~~~~~------~~~~~-~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~-~-~~~~~~p-~--~g 322 (388)
T PRK07366 255 AQLIQALRQVKAVVD------FNQYR-GILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQ-I-GWPVPLP-E--AT 322 (388)
T ss_pred HHHHHHHHHHHhhcc------cCCCH-HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH-C-CCcccCC-C--ee
Confidence 777666654432111 11212 2222333344322345788888899999999999988 5 5543322 1 13
Q ss_pred ceEEEEEccc---cchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHH
Q 040741 352 GNLNLSFAYV---EGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIEL 425 (457)
Q Consensus 352 ~~~~~~~~~~---~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~ 425 (457)
.++.+.++.. +..++...+ .||.+.+|..+.. ...++|||+++. +.+++++++++
T Consensus 323 ~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~-----------------~~~~~iRi~~~~--~~~~l~~~l~r 383 (388)
T PRK07366 323 MYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGK-----------------SGEGYVRFALVH--DPDILEEAVER 383 (388)
T ss_pred EEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhCc-----------------CCCCeEEEEecC--CHHHHHHHHHH
Confidence 4444455421 245555444 4899998864421 113799999974 58999999999
Q ss_pred HHHH
Q 040741 426 TVKQ 429 (457)
Q Consensus 426 l~~~ 429 (457)
|+++
T Consensus 384 l~~~ 387 (388)
T PRK07366 384 IAAF 387 (388)
T ss_pred HHHh
Confidence 8865
No 103
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.95 E-value=3.1e-26 Score=228.19 Aligned_cols=326 Identities=16% Similarity=0.180 Sum_probs=221.2
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh----C--CCCC-cEEEeCCh
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI----G--ASPK-EIIFTSGA 127 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~----g--~~~~-~i~~t~g~ 127 (457)
.+.+.|+.+.+. +.|+++++++.+.+... . .. +|.......++++.+++++ | ++++ ++++|+|+
T Consensus 35 ~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~----~--~~--~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~ 106 (394)
T PRK05942 35 LDLIDLGMGNPDGAAPQPVIEAAIAALADP----Q--NH--GYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGS 106 (394)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhCC----C--Cc--cCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccCh
Confidence 345777765554 34566788777765421 0 01 1111123446666666665 5 3566 48999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC--CCCCCHHHHHHhcCCCceEEEEecc
Q 040741 128 TESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA--DGIVNLDELRAAIRPDTGLISVMAV 205 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~le~~i~~~t~li~i~~~ 205 (457)
++|+.+++.+++ ++||+|+++.++|+.+...+... |.+++.++.+. ++.+|++++++++++++++|+++++
T Consensus 107 ~~al~~~~~~~~----~~gd~Vlv~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P 179 (394)
T PRK05942 107 KEGLTHLALAYV----NPGDVVLVPSPAYPAHFRGPLIA---GAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYP 179 (394)
T ss_pred HHHHHHHHHHhC----CCCCEEEEcCCCCcchHHHHHHc---CCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCC
Confidence 999999999887 89999999999999988776655 99999998873 3468999999999999999999999
Q ss_pred ccccccccC---hHHHHHHHHhcCCcEEEehhhhcCCC----ccc---CCC-CcccEEEeccccccCCCC--ceEEEEec
Q 040741 206 NNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKI----PVD---VEK-WNVSLMSLSGHKIYGPKG--VGALYMRR 272 (457)
Q Consensus 206 ~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~----~~~---~~~-~~~Di~~~s~~K~~g~~G--~G~l~~~~ 272 (457)
+||||.+.+ +++|.++|+++|+++|+|++++.... ... +.. .+..+.+.|++|.||.+| +|++++++
T Consensus 180 ~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~ 259 (394)
T PRK05942 180 SNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNR 259 (394)
T ss_pred CCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCH
Confidence 999999998 77899999999999999999863221 111 111 234577889999888666 99999988
Q ss_pred CCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccc
Q 040741 273 RPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIG 352 (457)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 352 (457)
+.++++....... ..+.+.....++..+++...+.+++.+++++++++++.+.|.+ . ++.+..+ .. +.
T Consensus 260 ~l~~~l~~~~~~~-------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~-~-~~~~~~~-~~--~~ 327 (394)
T PRK05942 260 HIIQGLRTLKTNL-------DYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGE-L-GWNIPPT-KA--TM 327 (394)
T ss_pred HHHHHHHHHHhhc-------ccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH-C-CCeecCC-Ce--ee
Confidence 7766665433211 1123334444455556544445778888899999999999988 4 6665543 11 22
Q ss_pred eEEEEEcc-ccchHHHhc-c--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHH
Q 040741 353 NLNLSFAY-VEGESLLMG-L--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTV 427 (457)
Q Consensus 353 ~~~~~~~~-~~~~~~~~~-l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~ 427 (457)
++.+.++. .+..++... + +||.+.+|..+.. ...++|||+++. +.+.+...++++.
T Consensus 328 f~~~~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~-----------------~~~~~iRis~~~--~~~~l~~~l~~l~ 387 (394)
T PRK05942 328 YLWVPCPVGMGSTDFALNVLQKTGVVVTPGNAFGE-----------------GGEGYVRISLIA--DCDRLGEALDRLK 387 (394)
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCEEEeCChhhCc-----------------CCCCeEEEEecC--CHHHHHHHHHHHH
Confidence 34444442 344555543 3 6999988764321 113799999973 3455555554443
No 104
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.95 E-value=3.9e-26 Score=223.98 Aligned_cols=312 Identities=17% Similarity=0.178 Sum_probs=215.2
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh----C--CCCC-cEEEeCChHHHHHHHHHHhhh
Q 040741 68 PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI----G--ASPK-EIIFTSGATESNNVSIKGVMH 140 (457)
Q Consensus 68 ~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~----g--~~~~-~i~~t~g~T~a~~~al~~~~~ 140 (457)
+.++++.+++.+.......++.. ....++++.+++++ | ++++ ++++|+|+++++.+++.+++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~Y~~~----------~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~- 81 (350)
T TIGR03537 13 PTPPFIRKALIDAVPEVSQYPSA----------LGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFI- 81 (350)
T ss_pred CCCHHHHHHHHHHHhccCCCCCC----------CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHc-
Confidence 44788888888775432212111 22345555666554 6 4676 89999999999999999887
Q ss_pred hhcCCC---CEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC-CC-CCCCHHHHHHhcCCCceEEEEeccccccccccC-
Q 040741 141 FYKDKK---RHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG-AD-GIVNLDELRAAIRPDTGLISVMAVNNEIGVIQP- 214 (457)
Q Consensus 141 ~~~~~g---~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~-~~-~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~- 214 (457)
++| +.|+++.+.|+.+...++.. |.+++.++.+ .+ ..+|+++++++++++++++++++++||||.+.+
T Consensus 82 ---~~g~~~d~Vl~~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~ 155 (350)
T TIGR03537 82 ---DPEEDRRRVIFGTPGYPVYERGALFA---GGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPR 155 (350)
T ss_pred ---CCCCCCceEEEcCCCCcchHHHHHhc---CCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCH
Confidence 665 79999999999999888776 9999999986 33 348999999999989999999999999999999
Q ss_pred --hHHHHHHHHhcCCcEEEehhhhc---CCCcccCCC--CcccEEEeccccccCCCC--ceEEEEecCCCccccccccCC
Q 040741 215 --MEEIGQICKEFKIPFHTDAAQAL---GKIPVDVEK--WNVSLMSLSGHKIYGPKG--VGALYMRRRPRIRVEPLINGG 285 (457)
Q Consensus 215 --l~~i~~l~~~~~v~li~D~a~~~---g~~~~~~~~--~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~ 285 (457)
+++|.++|+++|+++++|++++. +..+..... .+..+++.|++|.+|.+| +|+++.+++..+++.......
T Consensus 156 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~ 235 (350)
T TIGR03537 156 SYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGDEKLISFLRKLRANF 235 (350)
T ss_pred HHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccccceeeecCHHHHHHHHHHHHhh
Confidence 88899999999999999999863 222211111 123477889999887666 899988766655555433211
Q ss_pred ccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcc-ccch
Q 040741 286 GQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAY-VEGE 364 (457)
Q Consensus 286 ~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 364 (457)
+ ...+.....++..++.. ...+.+.+++++++.+.+.+.|.+ . ++.+..+ .. +.++.+.++. .+..
T Consensus 236 ~-------~~~~~~~q~~~~~~l~~-~~~~~~~r~~l~~~~~~~~~~l~~-~-g~~~~~~-~g--~~~~~~~~~~~~~~~ 302 (350)
T TIGR03537 236 G-------VASPDFVQAAAKAAWSD-DNHVLERRKIFKRKRDLFIEFFNK-V-GLEYLYP-DA--TFYLWVKVPSGIDAK 302 (350)
T ss_pred c-------cCCCHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHH-C-CCcccCC-Ce--EEEEEEECCCCCCHH
Confidence 1 12222222323233321 224567778888889999999988 4 6655432 11 2223445543 3456
Q ss_pred HHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHH
Q 040741 365 SLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVK 428 (457)
Q Consensus 365 ~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~ 428 (457)
.+...| +||.+.+|..+.. ...+++||++. .++++++++++++++
T Consensus 303 ~l~~~L~~~gv~v~~g~~f~~-----------------~~~~~~Ri~~~--~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 303 DYALRLLENGIVVAPGENFGS-----------------GEEGYVRVALV--PTLEECEEALRLWER 349 (350)
T ss_pred HHHHHHHHCCEEEcCchhhCC-----------------CCCCEEEEEec--CCHHHHHHHHHHHhc
Confidence 666666 7999998865421 11278999986 467888888887764
No 105
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.95 E-value=8.7e-26 Score=230.12 Aligned_cols=330 Identities=16% Similarity=0.146 Sum_probs=225.9
Q ss_pred CCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhC------CCCCcEEEeCChHHHHHHHHH
Q 040741 63 MQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIG------ASPKEIIFTSGATESNNVSIK 136 (457)
Q Consensus 63 ~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g------~~~~~i~~t~g~T~a~~~al~ 136 (457)
.+++...|..+++++.+.+....... . .|.......++|+.++++++ +++++|++|+|+++|+.+++.
T Consensus 83 ~~~~~~~P~~~~~~~~~~~~~~~~~~----~--~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~ 156 (481)
T PTZ00377 83 PSVSSLFPADVVARAKEYLNAIGGGT----G--AYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQ 156 (481)
T ss_pred ccccccCCHHHHHHHHHHHHhCCCcc----c--CcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHH
Confidence 33444667888988877665431111 1 12222456677777777764 567889999999999999999
Q ss_pred HhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC--CCCCCHHHHHHhcCC------CceEEEEeccccc
Q 040741 137 GVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA--DGIVNLDELRAAIRP------DTGLISVMAVNNE 208 (457)
Q Consensus 137 ~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~le~~i~~------~t~li~i~~~~~~ 208 (457)
++.. ++||.|++..+.|+.+...++.. |.+++.++.+. ++.+|++++++++++ +++++++++++||
T Consensus 157 ~l~~---~~gD~Vlv~~P~y~~y~~~~~~~---g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NP 230 (481)
T PTZ00377 157 LLIG---DPSDGVMIPIPQYPLYSAAITLL---GGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNP 230 (481)
T ss_pred Hhcc---CCCCEEEECCCCchhHHHHHHHc---CCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCC
Confidence 8863 58999999999999998887776 99999999873 347899999999875 7888888899999
Q ss_pred cccccC---hHHHHHHHHhcCCcEEEehhhhcCCC----cc-c-------CCCC---c-ccEEEecccc-ccCCCC--ce
Q 040741 209 IGVIQP---MEEIGQICKEFKIPFHTDAAQALGKI----PV-D-------VEKW---N-VSLMSLSGHK-IYGPKG--VG 266 (457)
Q Consensus 209 ~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~----~~-~-------~~~~---~-~Di~~~s~~K-~~g~~G--~G 266 (457)
||.+++ +++|+++|++||++||+|++|.--.. ++ . .... + .-+++.|++| ++|.+| +|
T Consensus 231 TG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG 310 (481)
T PTZ00377 231 TGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGG 310 (481)
T ss_pred CCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceE
Confidence 999999 78899999999999999999973211 11 1 1110 0 1256779999 577555 89
Q ss_pred EEEE---ecCCCccccccccCCccccccccCCCChhHHHHHHHHHHH----------HHHhhHHHHHHHHHHHHHHHHHH
Q 040741 267 ALYM---RRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEI----------AKKEMDYDHKRITALHDRLLNGI 333 (457)
Q Consensus 267 ~l~~---~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~----------~~~~~~~~~~~~~~~~~~l~~~l 333 (457)
|+++ +++.++++...... . .+++.....++..+++. ....+.+..++++++++.+.+.|
T Consensus 311 ~~~~~~~p~~li~~l~~~~~~-------~-~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L 382 (481)
T PTZ00377 311 YFELTNIPPEVREQIYKLASI-------N-LCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDEL 382 (481)
T ss_pred EEEEeCCCHHHHHHHHHHhhe-------e-cCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9987 55555555433211 1 13444555555555531 22334555566788899999999
Q ss_pred hhcCCCeEEeCCCCCcccceEEEEEccc-------------cchHHHhc-c--cCeEecccCccCCCCCChhHHHHHcCC
Q 040741 334 KEKLDGVVVNGSMERRYIGNLNLSFAYV-------------EGESLLMG-L--KEVAVSSGSACTSASLEPSYVLRALGV 397 (457)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~-l--~~i~~~~g~~~~~~~~~~~~~l~~~g~ 397 (457)
.+ ++++.+..+.. +.++.+.+... +...++.. + +||.+.+|..+..
T Consensus 383 ~~-~~g~~~~~p~g---g~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~-------------- 444 (481)
T PTZ00377 383 NK-IEGVSCQPVEG---AMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQ-------------- 444 (481)
T ss_pred hc-CCCcEeecCCe---eEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCC--------------
Confidence 88 78888765321 22222222211 11223222 2 5999999976532
Q ss_pred CccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 398 DEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 398 ~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
. ...+++||+++ .+.++++.++++|++++++..
T Consensus 445 ~--~~~~~~Rls~~--~~~e~l~~~l~rl~~~~~~~~ 477 (481)
T PTZ00377 445 K--PGTYHFRITIL--PPEEQIEEMVKKIKEFHESFM 477 (481)
T ss_pred C--CCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHHH
Confidence 1 12369999998 568999999999999988654
No 106
>PRK07683 aminotransferase A; Validated
Probab=99.95 E-value=4.8e-26 Score=226.26 Aligned_cols=330 Identities=15% Similarity=0.156 Sum_probs=229.6
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh----CC--CCC-cEEEeCCh
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI----GA--SPK-EIIFTSGA 127 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~----g~--~~~-~i~~t~g~ 127 (457)
.+.+.|+.+.+. +.++.+.+++.+.+..... .|.......++|+.+++++ |. +++ ++++|+|+
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~---------~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~ 98 (387)
T PRK07683 28 DNLISLTIGQPDFPTPSHVKEAAKRAITENYT---------SYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGA 98 (387)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhcCCC---------CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCh
Confidence 456788777665 4567888998888764211 1111123456677777766 43 666 89999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCC-CCCCHHHHHHhcCCCceEEEEeccc
Q 040741 128 TESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGAD-GIVNLDELRAAIRPDTGLISVMAVN 206 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~-~~~d~~~le~~i~~~t~li~i~~~~ 206 (457)
++|+.+++.++. ++|+.|+++.+.|..+...++.. |+++++++.+.+ ..+|.+++++.++++++++++++++
T Consensus 99 ~~al~~~~~~l~----~~gd~Vl~~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~p~ 171 (387)
T PRK07683 99 SEAIDIAFRTIL----EPGTEVILPAPIYPGYEPIIRLC---GAKPVFIDTRSTGFRLTAEALENAITEKTRCVVLPYPS 171 (387)
T ss_pred HHHHHHHHHHhC----CCCCEEEEcCCCccchHHHHHHc---CCEEEEeecCcccCCCCHHHHHHhcCcCceEEEEeCCC
Confidence 999999999887 89999999999999887777665 999999998744 4578899999999899999999999
Q ss_pred cccccccC---hHHHHHHHHhcCCcEEEehhhhcCC---CcccCCC----CcccEEEeccccccCCCC--ceEEEEecCC
Q 040741 207 NEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGK---IPVDVEK----WNVSLMSLSGHKIYGPKG--VGALYMRRRP 274 (457)
Q Consensus 207 ~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~---~~~~~~~----~~~Di~~~s~~K~~g~~G--~G~l~~~~~~ 274 (457)
||||.+.+ +++|.++|+++|+++|+|++++... ....+.. .+..+++.|++|.+|.+| +|+++++++.
T Consensus 172 NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~l 251 (387)
T PRK07683 172 NPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYL 251 (387)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCHHH
Confidence 99999987 7888999999999999999987432 1111111 234688999999888555 9999998876
Q ss_pred CccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceE
Q 040741 275 RIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNL 354 (457)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 354 (457)
++++..... +.....+.....++...+......+++.+++++++++.+.+.|.+ . ++.+..+. . +.++
T Consensus 252 ~~~~~~~~~-------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~~~~-~--~~~~ 319 (387)
T PRK07683 252 AKHILKVHQ-------YNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLIS-M-GLDVEKPT-G--AFYL 319 (387)
T ss_pred HHHHHHHHH-------hccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH-c-CCcccCCC-e--eEEE
Confidence 665543321 111122333333333333322233567777888889999999988 4 55544321 1 2223
Q ss_pred EEEEcc--ccchHHHhc-c--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Q 040741 355 NLSFAY--VEGESLLMG-L--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQ 429 (457)
Q Consensus 355 ~~~~~~--~~~~~~~~~-l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~ 429 (457)
...++. .+..++... + +||.+.+|..+.. ...+++||+++. ++++++.++++|.+.
T Consensus 320 ~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~-----------------~~~~~~Ri~~~~--~~~~~~~al~~l~~~ 380 (387)
T PRK07683 320 FPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSE-----------------YGEGYVRLSYAY--SIETLKEGLDRLEAF 380 (387)
T ss_pred EEecccCCCCHHHHHHHHHHhCCEEEcCchhhCC-----------------CCCCeEEEEecC--CHHHHHHHHHHHHHH
Confidence 333432 344455543 2 6999999875421 113799999985 688999999999988
Q ss_pred HHH
Q 040741 430 VEK 432 (457)
Q Consensus 430 ~~~ 432 (457)
+++
T Consensus 381 l~~ 383 (387)
T PRK07683 381 LQQ 383 (387)
T ss_pred HHh
Confidence 753
No 107
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=8e-26 Score=223.09 Aligned_cols=319 Identities=17% Similarity=0.153 Sum_probs=228.6
Q ss_pred cEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHH
Q 040741 58 PLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIK 136 (457)
Q Consensus 58 ~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~ 136 (457)
.+.|+.+.+. ++++++.+++.+......++|.. ...++++.++++++++++++++|+|+++++.+++.
T Consensus 34 ~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~-----------~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~ 102 (369)
T PRK08153 34 RARIGANESGFGPSPSVIAAMREAAAEIWKYGDP-----------ENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVR 102 (369)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCC-----------ccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHH
Confidence 3577777666 78899999998876543322211 25689999999999998999999999999999999
Q ss_pred HhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhc-CCCceEEEEeccccccccccCh
Q 040741 137 GVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAI-RPDTGLISVMAVNNEIGVIQPM 215 (457)
Q Consensus 137 ~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i-~~~t~li~i~~~~~~~G~~~~l 215 (457)
+++ ++||.|++..+.|+.+...+... |.+++.++.+.++ +|++++++.+ +++++++++++++||||.+.+.
T Consensus 103 ~~~----~~gd~vlv~~p~y~~~~~~~~~~---g~~~~~vp~~~~~-~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~ 174 (369)
T PRK08153 103 LYV----EPGDPVVTSLGAYPTFNYHVAGF---GGRLVTVPYRDDR-EDLDALLDAARRENAPLVYLANPDNPMGSWHPA 174 (369)
T ss_pred Hhc----CCCCEEEECCCcchHHHHHHHHc---CCeEEEeeCCCCC-CCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCH
Confidence 888 89999999999999988766655 9999999986554 7899988766 4678999999999999999998
Q ss_pred HHHHHHHHhc--CCcEEEehhhhcCCC---cccCC-CCcccEEEeccccccCCCC--ceEEEEecCCCccccccccCCcc
Q 040741 216 EEIGQICKEF--KIPFHTDAAQALGKI---PVDVE-KWNVSLMSLSGHKIYGPKG--VGALYMRRRPRIRVEPLINGGGQ 287 (457)
Q Consensus 216 ~~i~~l~~~~--~v~li~D~a~~~g~~---~~~~~-~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~~ 287 (457)
+++.++++.+ +++||+|++++.-.. ...+. .....+++.|++|.+|.+| +|+++++++.++++......
T Consensus 175 ~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~~~~--- 251 (369)
T PRK08153 175 ADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKVRNH--- 251 (369)
T ss_pred HHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEEEecchHhccCcchheeeeecCHHHHHHHHHhhcC---
Confidence 8777776654 899999999863211 11111 1123477889999888665 89999987665555433311
Q ss_pred ccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcc--ccchH
Q 040741 288 ERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAY--VEGES 365 (457)
Q Consensus 288 ~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 365 (457)
...+.....++..+++. .+.+++..+..+++++++.+.|++ . ++.+.. .. ..++.+.+.. .....
T Consensus 252 ------~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~~~~~L~~-~-g~~~~p--~~--~~f~~~~~~~~~~~a~~ 318 (369)
T PRK08153 252 ------FGMNRIAQAAALAALKD-QAYLAEVVGKIAAARDRIAAIARA-N-GLTPLP--SA--TNFVAIDCGRDGAFARA 318 (369)
T ss_pred ------CCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHH-C-CCccCC--Cc--CcEEEEECCCCcccHHH
Confidence 24555666655555542 223667778888888889888887 4 554332 11 3344444431 22446
Q ss_pred HHhcc--cCeEec-ccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 366 LLMGL--KEVAVS-SGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 366 ~~~~l--~~i~~~-~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
+...+ +||.+. +|.. ...+++|++++ +++|+++++++++++++.++
T Consensus 319 l~~~l~~~Gi~v~~p~~~--------------------~~~~~iRis~~---~~~~~~~~~~al~~~~~~~~ 367 (369)
T PRK08153 319 VLDGLIARDIFVRMPGVA--------------------PLDRCIRVSCG---PDEELDLFAEALPEALEAAR 367 (369)
T ss_pred HHHHHHHCCeEEeeCCCC--------------------CCCCeEEEecC---CHHHHHHHHHHHHHHHHHhh
Confidence 66655 688884 3321 11269999998 58999999999999887554
No 108
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.95 E-value=1.1e-25 Score=227.94 Aligned_cols=303 Identities=16% Similarity=0.209 Sum_probs=221.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHH-HhcCcEEEEEe
Q 040741 99 SEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHL-QQEGFEITYLP 177 (457)
Q Consensus 99 ~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~-~~~G~~v~~v~ 177 (457)
..+...++++++++++|++++++++++|||++++.++.++.. .++++|++++++|+++..+++.+ ...|++++.++
T Consensus 110 ~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~---~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~ 186 (447)
T PRK00451 110 TLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMAVRI---TKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVP 186 (447)
T ss_pred HHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHh---cCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEec
Confidence 446777888899999999988899999999999988887753 68899999999999999887753 44699999999
Q ss_pred CCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEE--ehhhhcCCCcccCCCCcccEEEec
Q 040741 178 VGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHT--DAAQALGKIPVDVEKWNVSLMSLS 255 (457)
Q Consensus 178 ~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~--D~a~~~g~~~~~~~~~~~Di~~~s 255 (457)
.+.+ .+|++++++++++++++|+++++ |++|.+.|+++|.++|+++|+++++ |.. +.|.... ..++++|++++|
T Consensus 187 ~~~~-~~d~~~l~~~i~~~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~~~-~~~~~~D~~~~s 262 (447)
T PRK00451 187 YEDG-VTDLEALEAAVDDDTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLLKP-PGEYGADIVVGE 262 (447)
T ss_pred CCCC-CCCHHHHHHhcCCCeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccCCC-cccCCCCEEEEC
Confidence 8877 89999999999999999999998 8899999999999999999999998 644 4554432 356789999998
Q ss_pred cccc-----cCCCCceEEEEecCCCccccccccCCccc-----------------cccccCCCChhH---HH--HHHHHH
Q 040741 256 GHKI-----YGPKGVGALYMRRRPRIRVEPLINGGGQE-----------------RGIRSGTLPTPL---IV--GFGSAC 308 (457)
Q Consensus 256 ~~K~-----~g~~G~G~l~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~t~~~~~---~~--al~~al 308 (457)
.+|+ +|++|+|+++++++....+.+...|+... .+...++.+... +. +...++
T Consensus 263 ~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l 342 (447)
T PRK00451 263 GQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYM 342 (447)
T ss_pred CCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHH
Confidence 8774 45557999999988777665443333110 112223333321 22 222234
Q ss_pred HHH-HHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHHhcc--cCeEec-ccCccCCC
Q 040741 309 EIA-KKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGL--KEVAVS-SGSACTSA 384 (457)
Q Consensus 309 ~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~-~g~~~~~~ 384 (457)
+.+ .++++++.+++.++++++.+.|.+ ++++.+... .....+.+.++ .+..++.+.| ++|... .+....
T Consensus 343 ~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~~g~~~~~~---~~~~~~~v~~~-~~~~~~~~~L~~~gi~~~~~~~~~~-- 415 (447)
T PRK00451 343 SLLGPEGLRELAEQNHQKAHYLAERLAE-IGGVELFDG---PFFNEFVVRLP-KPAEEVNEALLEKGILGGYDLGRYY-- 415 (447)
T ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHHhh-cCCEEecCC---CeEEEEEEecC-CCHHHHHHHHHhcCCCCCccccccc--
Confidence 433 346899999999999999999999 888887622 11122223332 3456777777 444321 111100
Q ss_pred CCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHH
Q 040741 385 SLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 385 ~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~ 430 (457)
+.. .+.+|++++.++|++|+++++++|++.+
T Consensus 416 --------------~~~-~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 416 --------------PEL-GNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred --------------CCc-CCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 011 2689999999999999999999998753
No 109
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.95 E-value=1.1e-25 Score=225.04 Aligned_cols=319 Identities=17% Similarity=0.177 Sum_probs=224.9
Q ss_pred CCHHHHHHHHHHHhhc-cCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCC
Q 040741 69 VDPRVLDAMLPFYLSR-YGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKR 147 (457)
Q Consensus 69 ~~~~v~~a~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~ 147 (457)
.++++.+++.+.+... ++.+.+ ....+..+...++++.+++++|.+ +++++|+| ++++..+++++. ++||
T Consensus 57 ~~~~i~~a~~~~~~~~~~~~~~~---~~~~G~~~l~~~l~~~la~~~g~~-~~i~~tsG-~~a~~~~~~~l~----~~gd 127 (397)
T PRK06939 57 NHPELIAAAKAALDSHGFGMASV---RFICGTQDLHKELEEKLAKFLGTE-DAILYSSC-FDANGGLFETLL----GKED 127 (397)
T ss_pred CCHHHHHHHHHHHHHcCCCCccc---ccccCCcHHHHHHHHHHHHHhCCC-cEEEEcCh-HHHHHHHHHHhC----CCCC
Confidence 6889999999988652 222111 111122367888999999999975 55666665 888999888887 8999
Q ss_pred EEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC------CceEEEEeccccccccccChHHHHHH
Q 040741 148 HVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP------DTGLISVMAVNNEIGVIQPMEEIGQI 221 (457)
Q Consensus 148 ~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~------~t~li~i~~~~~~~G~~~~l~~i~~l 221 (457)
+|+++++.|+++...++.+ |.+++.++. .|++++++++++ ++++|++.+++|++|...++++|.++
T Consensus 128 ~vi~~~~~~~~~~~~~~~~---~~~~~~~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~l 199 (397)
T PRK06939 128 AIISDALNHASIIDGVRLC---KAKRYRYAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDL 199 (397)
T ss_pred EEEEEhhhhHHHHHHHHhc---CCceEEeCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHH
Confidence 9999999999998877666 888777754 388888888763 67889988899999999999999999
Q ss_pred HHhcCCcEEEehhhhcCCCccc------CC--CCcccEEEecccccc-CCCCceEEEEecCCCccccccccCCccccccc
Q 040741 222 CKEFKIPFHTDAAQALGKIPVD------VE--KWNVSLMSLSGHKIY-GPKGVGALYMRRRPRIRVEPLINGGGQERGIR 292 (457)
Q Consensus 222 ~~~~~v~li~D~a~~~g~~~~~------~~--~~~~Di~~~s~~K~~-g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 292 (457)
|++||+++|+|++|+.|..... .. ..++|++++|+||.+ |+. +|+++++++.++.+....... ..
T Consensus 200 a~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r-~G~v~~~~~~~~~l~~~~~~~-----~~ 273 (397)
T PRK06939 200 ADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGAS-GGYTAGRKEVIDWLRQRSRPY-----LF 273 (397)
T ss_pred HHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccC-ceEEEeCHHHHHHHHHhCccc-----cc
Confidence 9999999999999976533211 11 124689999999966 565 599999877665554321110 11
Q ss_pred cCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcc-ccchHHHhcc-
Q 040741 293 SGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAY-VEGESLLMGL- 370 (457)
Q Consensus 293 ~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l- 370 (457)
.+++++..++++.++++.+. ...+..++++++++++.+.|.+ + ++.+..+ . ..++.+.++. .+..++...|
T Consensus 274 ~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~L~ 346 (397)
T PRK06939 274 SNSLAPAIVAASIKVLELLE-ESDELRDRLWENARYFREGMTA-A-GFTLGPG-E---HPIIPVMLGDAKLAQEFADRLL 346 (397)
T ss_pred cCCCCHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHH-c-CCCcCCC-C---CCEEEEEECCHHHHHHHHHHHH
Confidence 23444555566666776654 3467788899999999999988 4 4544321 1 2333333332 2345666665
Q ss_pred -cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 371 -KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 371 -~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
+||.+.++.+.. ......+||++++.+++++++++++++|+++++++
T Consensus 347 ~~gI~v~~~~~~~----------------~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 347 EEGVYVIGFSFPV----------------VPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred HCCceEeeeCCCC----------------CCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 688877432211 01123689999999899999999999999987754
No 110
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.95 E-value=4.9e-26 Score=217.79 Aligned_cols=340 Identities=18% Similarity=0.187 Sum_probs=239.6
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCC
Q 040741 68 PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKR 147 (457)
Q Consensus 68 ~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~ 147 (457)
.+.++.++++.+.+.+.+-.++ +.+.++++++++++|+.. ++.++|||.|+.++++++.. ++||
T Consensus 12 ~i~~~e~~~v~~vl~sg~i~~G-----------~~v~~FE~~~ae~~G~k~--ava~~sgT~AL~laL~al~i---g~GD 75 (374)
T COG0399 12 SIGEEELAAVQEVLKSGWLTGG-----------PFVRRFEQAFAEYLGVKY--AVAVSSGTAALHLALLALAI---GPGD 75 (374)
T ss_pred CcchHHHHHHHHHHHcCCeecC-----------hHHHHHHHHHHHHhCCCe--EEEecChHHHHHHHHHhcCC---CCCC
Confidence 3678899999999987543321 688999999999999876 99999999999999997764 8999
Q ss_pred EEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC-CCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcC
Q 040741 148 HVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA-DGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFK 226 (457)
Q Consensus 148 ~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~-~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~ 226 (457)
+||++..+|.+..+++.+. |+++++++++. .+.+|++.||++|+++|+.|+..|. .|...++++|.++|++||
T Consensus 76 eVI~ps~TfvATan~i~~~---Ga~PVFvDid~~T~nid~~~ie~aIt~~tKAIipVhl---~G~~~dm~~i~~la~~~~ 149 (374)
T COG0399 76 EVIVPSFTFVATANAVLLV---GAKPVFVDIDPDTLNIDPDLIEAAITPRTKAIIPVHL---AGQPCDMDAIMALAKRHG 149 (374)
T ss_pred EEEecCCchHHHHHHHHHc---CCeEEEEecCCcccCCCHHHHHHHcccCCeEEEEehh---ccCCCCHHHHHHHHHHcC
Confidence 9999999999999999888 99999999994 4789999999999999999999887 799999999999999999
Q ss_pred CcEEEehhhhcCCCcccC--CCCc-ccEEEeccccccCCCCceEEEEecCCC-ccccccccCCccc---cccccCCCChh
Q 040741 227 IPFHTDAAQALGKIPVDV--EKWN-VSLMSLSGHKIYGPKGVGALYMRRRPR-IRVEPLINGGGQE---RGIRSGTLPTP 299 (457)
Q Consensus 227 v~li~D~a~~~g~~~~~~--~~~~-~Di~~~s~~K~~g~~G~G~l~~~~~~~-~~~~~~~~~~~~~---~~~~~~t~~~~ 299 (457)
++||.|+||++|+..-+- ..++ +-+++|-.+|.++....|+++.+++.+ ++++.+...|... .....-.....
T Consensus 150 l~vIEDaAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K~ittgEGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N 229 (374)
T COG0399 150 LPVIEDAAQAHGATYKGKKVGSFGDIGAFSFHATKNLTTGEGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYN 229 (374)
T ss_pred CeEEEEcchhccCeecCcccccccceEEEEecCCCCccccCceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccc
Confidence 999999999999875432 1222 334444556865543348888887533 3333333222111 00111011111
Q ss_pred -HHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccce--EEEEEcc--ccchHHHhccc--
Q 040741 300 -LIVGFGSACEIAK-KEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGN--LNLSFAY--VEGESLLMGLK-- 371 (457)
Q Consensus 300 -~~~al~~al~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~l~-- 371 (457)
-+..+.+|+.+.+ +.++++.++.+++++++.+.|++ ++++.+...+......+ ..+.++. .+.+.+...|+
T Consensus 230 ~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~-~~~~~~p~~~~~~~~~~~~~~i~~~~~~~~R~~l~~~L~~~ 308 (374)
T COG0399 230 YRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKG-LPGITLPPEPDGAVHAWHLYTILVDEEGISRDALMESLKEA 308 (374)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCCceeeeeeeEEEecCCCCCHHHHHHHHHhC
Confidence 1112333443333 35788899999999999999999 77766655443322222 2223332 34567777773
Q ss_pred CeEecccCccCCCCCChhHHHH------HcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 372 EVAVSSGSACTSASLEPSYVLR------ALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 372 ~i~~~~g~~~~~~~~~~~~~l~------~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
||. ...++.|-...|-|.-. .+...+....+.+++.+....+.+|++++++.|++++..
T Consensus 309 gi~--~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 309 GVG--AVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred CCC--ceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhcc
Confidence 444 44445543333322111 122233456789999999999999999999999998753
No 111
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.95 E-value=1.5e-25 Score=221.00 Aligned_cols=332 Identities=16% Similarity=0.117 Sum_probs=238.7
Q ss_pred cEEecCCCCCC----CCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHH
Q 040741 58 PLYLDMQATTP----VDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNV 133 (457)
Q Consensus 58 ~i~l~~~~~~~----~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~ 133 (457)
.-+++|.++.+ -.|++.++..+.++.+ |...+ ....-.+....+.++|+.||+++|.+. +++.++|..|+..
T Consensus 102 r~~l~FsSndYLGL~~~p~v~~a~~~ai~~y-G~g~~-gSrl~~G~~~~h~~LE~~LA~f~g~e~--all~sSGy~AN~~ 177 (476)
T PLN02955 102 KKLLLFSGNDYLGLSSHPTISNAAANAAKEY-GMGPK-GSALICGYTTYHRLLESSLADLKKKED--CLVCPTGFAANMA 177 (476)
T ss_pred ceEEEeeccCccCCCCCHHHHHHHHHHHHHc-CCCCC-CcCccccChHHHHHHHHHHHHHHCCCc--EEEECChHHHHHH
Confidence 35777877774 4688999988888764 32211 112222333688899999999999876 8888889999999
Q ss_pred HHHHhhh----------hhcCCCCEEEEcCCCCcchHHHHHHHHhc-CcEEEEEeCCCCCCCCHHHHHHhcC---CCceE
Q 040741 134 SIKGVMH----------FYKDKKRHVITTQTEHKCVLDSCRHLQQE-GFEITYLPVGADGIVNLDELRAAIR---PDTGL 199 (457)
Q Consensus 134 al~~~~~----------~~~~~g~~vi~~~~~h~~~~~~~~~~~~~-G~~v~~v~~~~~~~~d~~~le~~i~---~~t~l 199 (457)
++.++.. ...++++.|+++...|.|...+++..+.. ++++..++.+ |+++|+++++ .+.++
T Consensus 178 ~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HN-----D~~~Le~~L~~~~~~~~~ 252 (476)
T PLN02955 178 AMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHC-----DMYHLNSLLSSCKMKRKV 252 (476)
T ss_pred HHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCC-----CHHHHHHHHHhCCCCceE
Confidence 8888731 01156788999999999999999987544 4788888877 8999998874 34678
Q ss_pred EEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcc---------cCCCCcccEEEeccccccCCCCceEEEE
Q 040741 200 ISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPV---------DVEKWNVSLMSLSGHKIYGPKGVGALYM 270 (457)
Q Consensus 200 i~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~---------~~~~~~~Di~~~s~~K~~g~~G~G~l~~ 270 (457)
|+++.+.++.|.+.|+++|.++|++||+++++|+||++|.... ++. .++|+++.|++|.+|..| |++++
T Consensus 253 Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~-~di~ii~~TLsKA~G~~G-Gfi~g 330 (476)
T PLN02955 253 VVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCE-ADVDLCVGTLSKAAGCHG-GFIAC 330 (476)
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCC-CCCcEEEEeCccchhccC-ceeec
Confidence 9999999999999999999999999999999999999765422 221 257899999999999886 99999
Q ss_pred ecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcc
Q 040741 271 RRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRY 350 (457)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 350 (457)
+++.++.+....... ..++..+++.+++..++++.+..+ +..+++++++.+++++.+ ++.+ .
T Consensus 331 s~~~~~~l~~~~~~~-----ifStalpp~~aaa~laal~l~~~~-~~~r~~L~~n~~~fr~~~-----G~~~-~------ 392 (476)
T PLN02955 331 SKKWKQLIQSRGRSF-----IFSTAIPVPMAAAAYAAVVVARKE-KWRRKAIWERVKEFKALS-----GVDI-S------ 392 (476)
T ss_pred HHHHHHHHHHhCCCC-----eecccccHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHhc-----CCCC-C------
Confidence 886555554322211 333455666777777888877654 456778888888888732 2221 1
Q ss_pred cceEEEEEcc-ccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHH
Q 040741 351 IGNLNLSFAY-VEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTV 427 (457)
Q Consensus 351 ~~~~~~~~~~-~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~ 427 (457)
.+++.+.+.. .....+...| +||.+.+-.+.+. +.+..++||+++..+|++||++++++|.
T Consensus 393 sPI~pI~ig~~~~a~~~~~~L~~~Gi~v~~i~yPtV----------------P~g~~rLRi~lsA~Ht~edId~lv~~L~ 456 (476)
T PLN02955 393 SPIISLVVGNQEKALKASRYLLKSGFHVMAIRPPTV----------------PPNSCRLRVTLSAAHTTEDVKKLITALS 456 (476)
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHCCCEEEEECCCCC----------------CCCCceEEEeeCCCCCHHHHHHHHHHHH
Confidence 3344444432 2223445555 6887765443322 1233689999999999999999999999
Q ss_pred HHHHHHH
Q 040741 428 KQVEKLR 434 (457)
Q Consensus 428 ~~~~~~~ 434 (457)
++.+...
T Consensus 457 ~~~~~~~ 463 (476)
T PLN02955 457 SCLDFDN 463 (476)
T ss_pred HHHhhhc
Confidence 8866543
No 112
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.95 E-value=7.1e-26 Score=226.26 Aligned_cols=333 Identities=15% Similarity=0.118 Sum_probs=230.6
Q ss_pred CCcEEecCCCCC-----CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhC-----CCCCcEEEeC
Q 040741 56 GRPLYLDMQATT-----PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIG-----ASPKEIIFTS 125 (457)
Q Consensus 56 ~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g-----~~~~~i~~t~ 125 (457)
.+.+.|..+.+. ++++.+.+++.+.+.... ..+|.......++++.++++++ ++++++++|+
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~--------~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~ 102 (401)
T TIGR01264 31 KPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGK--------YNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCS 102 (401)
T ss_pred CCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccC--------CCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECc
Confidence 355677766553 567889999888765310 1112112345678888888887 6778899999
Q ss_pred ChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC--CCCCCHHHHHHhcCCCceEEEEe
Q 040741 126 GATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA--DGIVNLDELRAAIRPDTGLISVM 203 (457)
Q Consensus 126 g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~le~~i~~~t~li~i~ 203 (457)
|+++|+.+++.+++ ++|++|+++.+.|..+...++.. |++++.++.+. ++.+|++++++++++++++++++
T Consensus 103 G~~~al~~~~~~l~----~~gd~v~i~~P~y~~~~~~~~~~---g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~ 175 (401)
T TIGR01264 103 GCSHAIEMCIAALA----NAGQNILVPRPGFPLYETLAESM---GIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALIVN 175 (401)
T ss_pred ChHHHHHHHHHHhC----CCCCEEEEeCCCChhHHHHHHHc---CCEEEEeecCCccCCCCCHHHHHHHhccCceEEEEc
Confidence 99999999999988 89999999999998887666555 99999988753 46799999999998889999999
Q ss_pred ccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCC---Cc-cc---CCCCcccEEEeccccccCCCC--ceEEEEe
Q 040741 204 AVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGK---IP-VD---VEKWNVSLMSLSGHKIYGPKG--VGALYMR 271 (457)
Q Consensus 204 ~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~---~~-~~---~~~~~~Di~~~s~~K~~g~~G--~G~l~~~ 271 (457)
+++||||.+.+ +++|+++|+++|+++++|+++.-.. .. .. ......-+++.|++|.||.+| +|++++.
T Consensus 176 ~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~ 255 (401)
T TIGR01264 176 NPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIH 255 (401)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEec
Confidence 99999999987 7788999999999999999997321 11 11 111112377889999877666 9999987
Q ss_pred cC--CCccc-cccccCCccccccccCCCChhHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCC
Q 040741 272 RR--PRIRV-EPLINGGGQERGIRSGTLPTPLIVGFGSACEI-AKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSME 347 (457)
Q Consensus 272 ~~--~~~~~-~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 347 (457)
+. ....+ .....-. .....++.....++..++.. ..+.+++..++++++++++.+.|++ ++++.+..+ .
T Consensus 256 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~-~~~~~~~~p-~ 328 (401)
T TIGR01264 256 DRRGILRDIRDGLVKLS-----QRILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAA-VPGLRPVMP-S 328 (401)
T ss_pred CcchhHHHHHHHHHHHh-----hccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHh-CCCCcccCC-C
Confidence 42 11111 1111000 00113344444445455542 2345778888899999999999998 767554332 1
Q ss_pred CcccceEEEEEcc------ccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHH
Q 040741 348 RRYIGNLNLSFAY------VEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAE 418 (457)
Q Consensus 348 ~~~~~~~~~~~~~------~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~ed 418 (457)
. +.++.+.++. .+..++...+ +||.+.+|..+.. .+++||+++. ++++
T Consensus 329 ~--g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~-------------------~~~iRis~~~--~~~~ 385 (401)
T TIGR01264 329 G--AMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEY-------------------PGFFRVVLTV--PVVM 385 (401)
T ss_pred e--eeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCC-------------------CCeEEEEEcC--CHHH
Confidence 1 3444444431 1344555543 5899988864321 2799999985 5799
Q ss_pred HHHHHHHHHHHHHHH
Q 040741 419 VDRAIELTVKQVEKL 433 (457)
Q Consensus 419 id~~~~~l~~~~~~~ 433 (457)
++..+++|.++++++
T Consensus 386 l~~~l~rl~~~~~~~ 400 (401)
T TIGR01264 386 MEEACSRIQEFCERH 400 (401)
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999888653
No 113
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.95 E-value=2.9e-25 Score=225.28 Aligned_cols=347 Identities=14% Similarity=0.129 Sum_probs=229.6
Q ss_pred EEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCc-cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHH
Q 040741 59 LYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRT-HLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIK 136 (457)
Q Consensus 59 i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~ 136 (457)
.|+..+.+. ..++.+.+++.+... +.+.+... .....+..+...++++++++++|.+.. .++.++|+.+...++.
T Consensus 71 ~~~g~G~~~~~~~p~i~~~~~~~~~--~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~-~l~~~~GA~a~~~~l~ 147 (481)
T PRK04366 71 GFYPLGSCTMKYNPKINEKVARLPG--FAELHPLQPEETVQGALELMYELQEWLKEITGMDAV-TLQPAAGAHGELTGLL 147 (481)
T ss_pred ceecCcccCCCCCHHHHHHHHhCcc--hhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCce-EEEeCcHHHHHHHHHH
Confidence 466666344 778888888887521 11211111 112344558889999999999999742 3443445444433222
Q ss_pred HhhhhhcCCCC----EEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccc
Q 040741 137 GVMHFYKDKKR----HVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVI 212 (457)
Q Consensus 137 ~~~~~~~~~g~----~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~ 212 (457)
.+..+..++|+ +|+++.+.|+++...+... |++++.++.+.++.+|++++++++++++++|++++++ ++|.+
T Consensus 148 ~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~---G~~vv~v~~~~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~ 223 (481)
T PRK04366 148 MIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMA---GFKVVEIPSNEDGLVDLEALKAAVGEDTAALMLTNPN-TLGLF 223 (481)
T ss_pred HHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHc---CCEEEEeecCCCCCcCHHHHHhhcccCCeEEEEeCCC-Ccccc
Confidence 21111114554 9999999999999876554 9999999998788999999999999999999999876 89987
Q ss_pred -cChHHHHHHHHhcCCcEEEehhhhcCCC-cccCCCCcccEEEecccccc------CCCCceEEEEecCCCccccccccC
Q 040741 213 -QPMEEIGQICKEFKIPFHTDAAQALGKI-PVDVEKWNVSLMSLSGHKIY------GPKGVGALYMRRRPRIRVEPLING 284 (457)
Q Consensus 213 -~~l~~i~~l~~~~~v~li~D~a~~~g~~-~~~~~~~~~Di~~~s~~K~~------g~~G~G~l~~~~~~~~~~~~~~~~ 284 (457)
.|+++|+++|+++|+++++|+|+..+.. ..+..++++|++++++||++ |++|+|++++++++..++.+...+
T Consensus 224 ~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~ 303 (481)
T PRK04366 224 ERNILEIAEIVHEAGGLLYYDGANLNAILGKARPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVE 303 (481)
T ss_pred chHHHHHHHHHHHcCCEEEEEecChhhhcccCCccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeee
Confidence 5899999999999999999999986532 24566789999999999953 345678999998766655433221
Q ss_pred C---c---------cccccccCCCChhHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCccc
Q 040741 285 G---G---------QERGIRSGTLPTPLIVGFGSACEI-AKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYI 351 (457)
Q Consensus 285 ~---~---------~~~~~~~~t~~~~~~~al~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 351 (457)
. . ..++...++.+...+.++...+.. ..+++.++.++...+++++++.|.+ +..+ .-+ ....
T Consensus 304 ~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~-~~~~--~~~--~~~~ 378 (481)
T PRK04366 304 KDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKD-IYDL--PYD--RPCM 378 (481)
T ss_pred ccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh-hCcc--cCC--CCee
Confidence 0 0 001233333333222222222222 2345778888889999999999988 5222 211 1111
Q ss_pred ceEEEEEc-----cccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHH
Q 040741 352 GNLNLSFA-----YVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIE 424 (457)
Q Consensus 352 ~~~~~~~~-----~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~ 424 (457)
..+.+.+. +.+..++...| +||.+..-. .+....+.+|+++...+|++|||++++
T Consensus 379 ~~~~~~~~~~~~~g~~~~~v~~~L~~~Gi~~~~~~------------------~p~~~~~~l~is~~e~~t~edid~l~~ 440 (481)
T PRK04366 379 HEFVLSGKKLKETGVRTLDIAKRLLDYGFHPPTIY------------------FPLIVPEALMIEPTETESKETLDAFIA 440 (481)
T ss_pred EEEEEECccccccCCCHHHHHHHHHHCCccCCccc------------------cccccCCeEEEcccCCCCHHHHHHHHH
Confidence 22233322 23456677777 455432100 011123789999999999999999999
Q ss_pred HHHHHHHHHHh
Q 040741 425 LTVKQVEKLRE 435 (457)
Q Consensus 425 ~l~~~~~~~~~ 435 (457)
+|+++.+++.+
T Consensus 441 ~l~~i~~~~~~ 451 (481)
T PRK04366 441 AMKQIAEEAKE 451 (481)
T ss_pred HHHHHHHHHHh
Confidence 99999988764
No 114
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.95 E-value=1e-25 Score=225.23 Aligned_cols=335 Identities=13% Similarity=0.116 Sum_probs=228.7
Q ss_pred CCcEEecCCCCC-----CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh------CCCCCcEEEe
Q 040741 56 GRPLYLDMQATT-----PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI------GASPKEIIFT 124 (457)
Q Consensus 56 ~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~------g~~~~~i~~t 124 (457)
.+.|.|..+.+. +.|+.+.+++.+.+.... ... |.......++++.+++++ +++++++++|
T Consensus 32 ~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~------~~~--Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it 103 (409)
T PLN00143 32 RLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAK------FNS--YAPTGGILPARRAIADYLSNDLPYQLSPDDVYLT 103 (409)
T ss_pred CceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcC------CCC--CCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEe
Confidence 455777776664 778889999988776320 001 111123455777777776 3577889999
Q ss_pred CChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC--CCCCCCHHHHHHhcCCCceEEEE
Q 040741 125 SGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG--ADGIVNLDELRAAIRPDTGLISV 202 (457)
Q Consensus 125 ~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~le~~i~~~t~li~i 202 (457)
+|+++++.+++.+++ ++|+.|++..+.|+.+...++.. |.+++.++.+ .+..+|+++++++++++++++++
T Consensus 104 ~G~~~al~~~~~~l~----~~gd~v~v~~P~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~ 176 (409)
T PLN00143 104 LGCKHAAEIIIKVLA----RPEANILLPRPGFPDVETYAIFH---HLEIRHFDLLPEKGWEVDLDAVEAIADENTIAMVI 176 (409)
T ss_pred cChHHHHHHHHHHHc----CCCCEEEEcCCCCcCHHHHHHHc---CCEEEEEeccCCCCCcCCHHHHHHhcccCCEEEEE
Confidence 999999999999998 89999999999999988777665 9999999874 34568999999999989999999
Q ss_pred eccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCC---Cc-cc---CCCCcccEEEeccccccCCCC--ceEEEE
Q 040741 203 MAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGK---IP-VD---VEKWNVSLMSLSGHKIYGPKG--VGALYM 270 (457)
Q Consensus 203 ~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~---~~-~~---~~~~~~Di~~~s~~K~~g~~G--~G~l~~ 270 (457)
+++|||||.+.+ +++|+++|++|+++|++|++|.--. .+ .. +.....-+++.|++|.|+.+| +||+++
T Consensus 177 ~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~ 256 (409)
T PLN00143 177 INPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVT 256 (409)
T ss_pred ECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEe
Confidence 999999999998 6778889999999999999997321 11 11 111223478889999877666 999998
Q ss_pred e-cC-CCccc---cccccCCccccccccCCCChhHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeC
Q 040741 271 R-RR-PRIRV---EPLINGGGQERGIRSGTLPTPLIVGFGSACEI-AKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNG 344 (457)
Q Consensus 271 ~-~~-~~~~~---~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 344 (457)
. ++ .++.+ ....... .... ..+.....++..+++. ....+++..+++++..+++.+.|.+ +++.....
T Consensus 257 ~~p~~~~~~~~~~~~~~~~~----~~~~-~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~~~~~~~~ 330 (409)
T PLN00143 257 CDPSGLLQICEIADSIKKAL----NPAP-FPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKE-IPCIMCPQ 330 (409)
T ss_pred eCchhhhhhHHHHHHHHHHH----hccC-CCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCC
Confidence 4 32 22111 1111000 0001 1233444444444432 2234677788888888888888888 65443222
Q ss_pred CCCCcccceEEEEEcc-----c-cchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCC
Q 040741 345 SMERRYIGNLNLSFAY-----V-EGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTT 415 (457)
Q Consensus 345 ~~~~~~~~~~~~~~~~-----~-~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t 415 (457)
.++. ..++.+.++. . +..++...+ +||.+.+|..+ |. .+++||+++. +
T Consensus 331 ~p~g--g~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f--------------~~-----~~~iRi~~~~--~ 387 (409)
T PLN00143 331 KAEG--AFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTV--------------GL-----KNWLRITFAV--E 387 (409)
T ss_pred CCCe--eEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCcccc--------------CC-----CCeEEEEEcC--C
Confidence 2222 3344444432 1 234454333 69999998643 11 2799999984 5
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 040741 416 EAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 416 ~edid~~~~~l~~~~~~~~ 434 (457)
.+++++.+++|++++++..
T Consensus 388 ~~~l~~al~rl~~~l~~~~ 406 (409)
T PLN00143 388 QSSLEDGLGRLKSFCGRHA 406 (409)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 8999999999999987654
No 115
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.95 E-value=1.2e-25 Score=220.99 Aligned_cols=319 Identities=15% Similarity=0.126 Sum_probs=220.5
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHH
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVS 134 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~a 134 (457)
.+.+.|+.+.+. ++|+.+++++.+.+.....+|. ....++++.++++++++++++++|+|+++++.++
T Consensus 20 ~~~i~l~~~~~~~~~p~~~~~a~~~~~~~~~~y~~-----------~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~ 88 (356)
T PRK08056 20 DQLLDFSANINPLGMPVSLKRAIIDNLDCAERYPD-----------VEYRHLHQALARHHQVPASWILAGNGETESIFAV 88 (356)
T ss_pred hhEEEeccccCCCCCCHHHHHHHHHHHHhcccCcC-----------ccHHHHHHHHHHHhCcChhhEEECCCHHHHHHHH
Confidence 456888877665 7889999999887654321111 1367899999999999999999999999999998
Q ss_pred HHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCC--CCCCHHHHHHhcCCCceEEEEeccccccccc
Q 040741 135 IKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGAD--GIVNLDELRAAIRPDTGLISVMAVNNEIGVI 212 (457)
Q Consensus 135 l~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~--~~~d~~~le~~i~~~t~li~i~~~~~~~G~~ 212 (457)
+.++ .+++ +++..+.|..+...++.. |.+++.++.+.+ ..+| +++++.+.+++++|++++++||||.+
T Consensus 89 ~~~l-----~~g~-viv~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~NPTG~~ 158 (356)
T PRK08056 89 VSGL-----KPRR-AMIVTPGFAEYRRALQQV---GCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLL 158 (356)
T ss_pred HHHh-----CCCC-EEEeCCCcHHHHHHHHHc---CCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCcCCCCCC
Confidence 8865 3465 555667777666655544 999999998633 3444 45666777889999999999999999
Q ss_pred cC---hHHHHHHHHhcCCcEEEehhhhcCCC----cc-cCCCCcccEEEeccccccCCCC--ceEEEEec-CCCcccccc
Q 040741 213 QP---MEEIGQICKEFKIPFHTDAAQALGKI----PV-DVEKWNVSLMSLSGHKIYGPKG--VGALYMRR-RPRIRVEPL 281 (457)
Q Consensus 213 ~~---l~~i~~l~~~~~v~li~D~a~~~g~~----~~-~~~~~~~Di~~~s~~K~~g~~G--~G~l~~~~-~~~~~~~~~ 281 (457)
.+ +++|+++|+++++++++|+++.--.. .. .+...+.++++.|+||.+|.+| +|++++.+ +.++++...
T Consensus 159 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~ 238 (356)
T PRK08056 159 PERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQ 238 (356)
T ss_pred CCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHh
Confidence 99 78899999999999999999752111 00 1223346788999999988665 99998853 333333321
Q ss_pred ccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccc
Q 040741 282 INGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYV 361 (457)
Q Consensus 282 ~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (457)
.. ..+.+.....++..+++. .....+..++++++++++.+.|++ ++++.+..+ . .+++.+.++ .
T Consensus 239 ~~---------~~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~~~-~---~~~~~~~~~-~ 302 (356)
T PRK08056 239 QM---------PWSINAFAALAGEVILQD-RAYQQATWQWLAEEGARFYQALCA-LPLLTVWPG-R---ANYLFLRCE-R 302 (356)
T ss_pred CC---------CCchhHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHhc-CCCcEEcCC-C---CcEEEEEcC-C
Confidence 11 113333333333333321 123556678888999999999988 778766432 1 344444444 2
Q ss_pred cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 362 EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 362 ~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
+..++...| +||.+.+|..+.. ...++|||+++ +.++.++++++|+++++
T Consensus 303 ~~~~~~~~l~~~gI~v~~~~~f~~-----------------~~~~~iRis~~---~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 303 PDIDLQRALLTQRILIRSCANYPG-----------------LDSRYYRVAIR---SAAENERLLAALRNVLT 354 (356)
T ss_pred ChHHHHHHHHHCCeEEEECCCCCC-----------------CCCCEEEEEEc---CHHHHHHHHHHHHHHHc
Confidence 345566655 7999998865421 12369999997 47899999999987643
No 116
>PRK07550 hypothetical protein; Provisional
Probab=99.95 E-value=6.3e-26 Score=225.56 Aligned_cols=328 Identities=17% Similarity=0.152 Sum_probs=227.5
Q ss_pred CcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh----C--CCCCcEEEeCChHH
Q 040741 57 RPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI----G--ASPKEIIFTSGATE 129 (457)
Q Consensus 57 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~----g--~~~~~i~~t~g~T~ 129 (457)
+.+.|..+.+. +.++.+.+++.+..... .. ..|+ ......++|+.+++++ | .+++++++|+|+++
T Consensus 30 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~Y~--~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 101 (386)
T PRK07550 30 PLIDLSQAVPGYPPPPELLRALAEAAADP----AA--HLYG--PVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQ 101 (386)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhCc----CC--cCCC--CCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHH
Confidence 45677666655 44677888887766321 10 1111 1123445555555554 4 46788999999999
Q ss_pred HHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC--CCCCCHHHHHHhcCCCceEEEEecccc
Q 040741 130 SNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA--DGIVNLDELRAAIRPDTGLISVMAVNN 207 (457)
Q Consensus 130 a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~le~~i~~~t~li~i~~~~~ 207 (457)
|+.+++.++. ++||.|++..+.|..+...++.. |++++.++.+. ++.+|++++++++++++++|++++++|
T Consensus 102 al~~~~~~l~----~~gd~Vlv~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~P~N 174 (386)
T PRK07550 102 AFWAAMVTLA----GAGDEVILPLPWYFNHKMWLDML---GIRPVYLPCDEGPGLLPDPAAAEALITPRTRAIALVTPNN 174 (386)
T ss_pred HHHHHHHHhc----CCCCEEEEcCCCCcchHHHHHhc---CCEEEEEecCCCcCCCCCHHHHHHHhcccCcEEEEeCCCC
Confidence 9999999987 89999999999998887666554 99999999863 345799999999998999999999999
Q ss_pred ccccccC---hHHHHHHHHhcCCcEEEehhhhcCC----CcccC---CC-CcccEEEeccccccCCCC--ceEEEEecCC
Q 040741 208 EIGVIQP---MEEIGQICKEFKIPFHTDAAQALGK----IPVDV---EK-WNVSLMSLSGHKIYGPKG--VGALYMRRRP 274 (457)
Q Consensus 208 ~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~----~~~~~---~~-~~~Di~~~s~~K~~g~~G--~G~l~~~~~~ 274 (457)
|+|.+.+ +++|+++|++||++||+|++++... .+... .. ....+++.|++|.+|.+| +|+++.+++.
T Consensus 175 PtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~ 254 (386)
T PRK07550 175 PTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPAR 254 (386)
T ss_pred CCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCHHH
Confidence 9999988 7789999999999999999986321 11111 11 123467889999777444 9999998766
Q ss_pred CccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceE
Q 040741 275 RIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNL 354 (457)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 354 (457)
+.++....... ..+++.....++..+++...+.+++.+++++++++++.+.|.+ ++++.+... . ..++
T Consensus 255 ~~~~~~~~~~~-------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~--g--~~~~ 322 (386)
T PRK07550 255 IAEIEKFMDTV-------AICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFAR-LPGWELLAS--G--AYFA 322 (386)
T ss_pred HHHHHHHHhhc-------ccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHh-CCCceeCCC--c--eEEE
Confidence 55555433211 1234445555555566544445677778888999999999988 556554321 1 2333
Q ss_pred EEEEc--cccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Q 040741 355 NLSFA--YVEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQ 429 (457)
Q Consensus 355 ~~~~~--~~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~ 429 (457)
.+.++ +.+..++...+ .||.+.+|..+.. ...+++||+++. .++++++.++++|.++
T Consensus 323 ~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~-----------------~~~~~iRis~~~-~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 323 YVRHPFPDRPSREVARRLAKEAGILCLPGTMFGP-----------------GQEGYLRLAFAN-ADVAGIGELVERLRAF 384 (386)
T ss_pred EecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCC-----------------CCCCEEEEEeec-CCHHHHHHHHHHHHhh
Confidence 34444 34566777664 4999998865421 112799999975 4589999999988765
No 117
>PRK07908 hypothetical protein; Provisional
Probab=99.95 E-value=1.4e-25 Score=220.03 Aligned_cols=317 Identities=16% Similarity=0.167 Sum_probs=221.7
Q ss_pred cCCCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHH
Q 040741 54 IAGRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNN 132 (457)
Q Consensus 54 ~~~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~ 132 (457)
...+.+.|+.+.+. ++++.+++++.+.+.....+|.. ....++++.+++++|++++++++|+|+++++.
T Consensus 20 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~----------~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~ 89 (349)
T PRK07908 20 AGPGLLDFAVNVRHDTPPEWLRERLAARLGDLAAYPST----------EDERRARAAVAARHGRTPDEVLLLAGAAEGFA 89 (349)
T ss_pred CCCCeEEecCCCCCCCCCHHHHHHHHHHhhHhhcCCCc----------cchHHHHHHHHHHhCcChhhEEECCCHHHHHH
Confidence 34677888887765 57888999999887543323221 34678999999999999999999999999999
Q ss_pred HHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccc
Q 040741 133 VSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVI 212 (457)
Q Consensus 133 ~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~ 212 (457)
+++. . +++ .+++..+.|......++ ..|.+++.++.+.++.+|++.+ +++++++++++++||||.+
T Consensus 90 ~~~~--l----~~~-~viv~~P~y~~~~~~~~---~~G~~i~~v~~~~~~~~d~~~l----~~~~~~i~l~np~NPTG~~ 155 (349)
T PRK07908 90 LLAR--L----RPR-RAAVVHPSFTEPEAALR---AAGIPVHRVVLDPPFRLDPAAV----PDDADLVVIGNPTNPTSVL 155 (349)
T ss_pred HHHh--c----CCC-eEEEeCCCChHHHHHHH---HcCCEEEeeccCcccCcChhHh----ccCCCEEEEcCCCCCCCCC
Confidence 8877 3 454 45566666666655444 4599999999886677888754 5678899999999999999
Q ss_pred cChHHHHHHHHhcCCcEEEehhhhc--CCCcccCC--CCcccEEEeccccccCCCC--ceEEEEecCCCccccccccCCc
Q 040741 213 QPMEEIGQICKEFKIPFHTDAAQAL--GKIPVDVE--KWNVSLMSLSGHKIYGPKG--VGALYMRRRPRIRVEPLINGGG 286 (457)
Q Consensus 213 ~~l~~i~~l~~~~~v~li~D~a~~~--g~~~~~~~--~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~ 286 (457)
.|.++|.++|++ +.++|+|++++- ......+. ..+..+++.|+||.+|.+| +|+++++++.++++.+....+
T Consensus 156 ~~~~~l~~l~~~-~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~~- 233 (349)
T PRK07908 156 HPAEQLLALRRP-GRILVVDEAFADAVPGEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRAHW- 233 (349)
T ss_pred cCHHHHHHHHhc-CCEEEEECcchhhccCCccccccccCCCEEEEeecccccCCccceeeeeecCHHHHHHHHhcCCCC-
Confidence 999999999975 788999999862 21222221 1223456669999888555 799999887666655443221
Q ss_pred cccccccCCCChhHHHHHHHHHH-HHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchH
Q 040741 287 QERGIRSGTLPTPLIVGFGSACE-IAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGES 365 (457)
Q Consensus 287 ~~~~~~~~t~~~~~~~al~~al~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (457)
..+.....++...++ .....+++..++++++++++.+.|.+ + ++.+..+.. ..++.+.++. ...
T Consensus 234 --------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~-~~~~~~p~~---g~~~~~~~~~--~~~ 298 (349)
T PRK07908 234 --------PVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRA-V-GARVVDPAA---APFVLVRVPD--AEL 298 (349)
T ss_pred --------CccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHh-C-CcEeccCCC---ceEEEEECCc--HHH
Confidence 233333443333332 11234677888889999999999998 6 777665322 4444444442 445
Q ss_pred HHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 366 LLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 366 ~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
+...+ +||.+.+|..+.. ...++|||+++ +++++++++++|++.+.
T Consensus 299 ~~~~l~~~gI~v~~g~~f~~-----------------~~~~~vRis~~---~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 299 LRKRLRERGIAVRRGDTFPG-----------------LDPDYLRLAVR---PRAEVPVLVQALAEILK 346 (349)
T ss_pred HHHHHHhCCEEEEECCCCCC-----------------CCCCeEEEEeC---CCccHHHHHHHHHHHHh
Confidence 55555 6899998865421 11379999996 57899999999987654
No 118
>PRK09082 methionine aminotransferase; Validated
Probab=99.95 E-value=1.1e-25 Score=223.56 Aligned_cols=332 Identities=17% Similarity=0.108 Sum_probs=232.5
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCC--CC-cEEEeCChHHHH
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGAS--PK-EIIFTSGATESN 131 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~--~~-~i~~t~g~T~a~ 131 (457)
.+.+.|..+.+. +.++.+.+++.+.+.... + .|....+..+..+.+.+.+.+++|.+ ++ ++++|+|+++|+
T Consensus 30 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~----~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al 104 (386)
T PRK09082 30 HGAINLSQGFPDFDGPPYLVEALAYAMAAGH-N----QYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEAL 104 (386)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHHcCC-C----CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHH
Confidence 456778776555 457888888888765321 0 11111122345666777777777864 33 699999999999
Q ss_pred HHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC-CCCCCCHHHHHHhcCCCceEEEEeccccccc
Q 040741 132 NVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG-ADGIVNLDELRAAIRPDTGLISVMAVNNEIG 210 (457)
Q Consensus 132 ~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~-~~~~~d~~~le~~i~~~t~li~i~~~~~~~G 210 (457)
.+++.+++ ++|++|++..+.|+++...++.+ |.+++.++.+ .++.+|+++++++++++++++++++++||||
T Consensus 105 ~~~~~~~~----~~gd~Vli~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG 177 (386)
T PRK09082 105 FAAILALV----RPGDEVIVFDPSYDSYAPAIELA---GGRAVRVALQPPDFRVDWQRFAAAISPRTRLIILNTPHNPSG 177 (386)
T ss_pred HHHHHHHc----CCCCEEEEeCCCchhhHHHHHHc---CCEEEEEecCcccccCCHHHHHHhcCccceEEEEeCCCCCCC
Confidence 99999988 89999999999999998887766 9999999986 4568999999999999999999999999999
Q ss_pred cccC---hHHHHHHHHhcCCcEEEehhhhcCCC----cc---cCCC-CcccEEEeccccccCCCC--ceEEEEecCCCcc
Q 040741 211 VIQP---MEEIGQICKEFKIPFHTDAAQALGKI----PV---DVEK-WNVSLMSLSGHKIYGPKG--VGALYMRRRPRIR 277 (457)
Q Consensus 211 ~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~----~~---~~~~-~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~ 277 (457)
.+.+ +++|.++|++||+++|+|++++.... .. .... .+..+++.|++|.+|.+| +|+++++++.++.
T Consensus 178 ~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~~l~~~ 257 (386)
T PRK09082 178 TVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPAALSAE 257 (386)
T ss_pred cCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCHHHHHH
Confidence 8865 78889999999999999999863221 11 1111 235688899999887666 8999998776655
Q ss_pred ccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEE
Q 040741 278 VEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLS 357 (457)
Q Consensus 278 ~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 357 (457)
+...... ...+.+.....++...+....+.+++..+.++++++++.+.|++ .++.+..+ +. ..++.+.
T Consensus 258 ~~~~~~~-------~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~--~~~~~~~~-~g--~~~~~~~ 325 (386)
T PRK09082 258 FRKVHQY-------NTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALAN--SRFKLLPC-EG--TYFQLVD 325 (386)
T ss_pred HHHHHhh-------hcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh--CCCcccCC-Ce--eEEEEEe
Confidence 5443311 11134444444444444322334677788889999999999988 35655432 21 2233344
Q ss_pred Ec---cccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHH
Q 040741 358 FA---YVEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVK 428 (457)
Q Consensus 358 ~~---~~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~ 428 (457)
++ +.+..++...+ .||.+.+|..+.. . ....+++||+++. ++++++..+++|++
T Consensus 326 ~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~--------------~-~~~~~~~Ri~~~~--~~~~l~~~~~rl~~ 385 (386)
T PRK09082 326 YSAISDLDDVEFCQWLTREHGVAAIPLSVFYA--------------D-PFPHRLVRLCFAK--QEETLDAAAERLCQ 385 (386)
T ss_pred ccccCCCCHHHHHHHHHHhCCEEEeCcHHhCC--------------C-CCCCCEEEEEecC--CHHHHHHHHHHHhh
Confidence 44 33456666654 4899998864321 0 1223799999986 68888888888764
No 119
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.95 E-value=2.8e-25 Score=220.14 Aligned_cols=329 Identities=13% Similarity=0.147 Sum_probs=215.0
Q ss_pred CHHHHHHHHHHHhhcc-CCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCE
Q 040741 70 DPRVLDAMLPFYLSRY-GNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRH 148 (457)
Q Consensus 70 ~~~v~~a~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~ 148 (457)
+|++.+++.+.++++. +...++.+ ||. ...+.++|+.+++++|.+. .++.++|+.++..++.++. ++||+
T Consensus 14 ~~~~~~~~~~a~~~~g~~~~~sr~~-yg~--~~~~~~LE~~lA~~~g~e~--al~~~sG~~a~~~~i~~l~----~~GD~ 84 (392)
T PLN03227 14 SPTLRQTALESLSHYGCGSCGPRGF-YGT--IDAHLELEQCMAEFLGTES--AILYSDGASTTSSTVAAFA----KRGDL 84 (392)
T ss_pred CHHHHHHHHHHHHHhCCCCcccccc-cCC--hHHHHHHHHHHHHHhCCCc--EEEecCcHHHHHHHHHHhC----CCCCE
Confidence 4567777777765432 22233332 333 3589999999999999863 5555556666678888887 89999
Q ss_pred EEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcC-----------CCceEEEEeccccccccccChHH
Q 040741 149 VITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIR-----------PDTGLISVMAVNNEIGVIQPMEE 217 (457)
Q Consensus 149 vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~-----------~~t~li~i~~~~~~~G~~~~l~~ 217 (457)
|++++..|++....+... ++++++++.++ .-|++.+.+.++ +++++|+++.++|++|.+.|+++
T Consensus 85 Vl~~~~~h~s~~~~~~l~---~~~~~~~~~~d--~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~ 159 (392)
T PLN03227 85 LVVDRGVNEALLVGVSLS---RANVRWFRHND--MKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKE 159 (392)
T ss_pred EEEeccccHHHHHHHHHc---CCeEEEeCCCC--HHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHH
Confidence 999999999998887554 77888777651 113344433442 36889999999999999999999
Q ss_pred HHHHHHhcCCcEEEehhhhcCCCc---------ccCC-CCcccEEEeccccccCCCCceEEEEecCCCccccccccCCcc
Q 040741 218 IGQICKEFKIPFHTDAAQALGKIP---------VDVE-KWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQ 287 (457)
Q Consensus 218 i~~l~~~~~v~li~D~a~~~g~~~---------~~~~-~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~~ 287 (457)
|.++|++||+++|+|++|++|... +++. ..++|++++|++|.+|+.| |+++++++..+.+.....+.
T Consensus 160 i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~g-g~v~~~~~~~~~~~~~~~~~-- 236 (392)
T PLN03227 160 LVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSVG-GMTVGSEEVVDHQRLSGSGY-- 236 (392)
T ss_pred HHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhccC-cEEecCHHHHHHHHHhCcCc--
Confidence 999999999999999999865331 1121 2356999999999888875 88887765544333221111
Q ss_pred ccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCC-------CcccceEEEEEcc
Q 040741 288 ERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSME-------RRYIGNLNLSFAY 360 (457)
Q Consensus 288 ~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 360 (457)
...+..++..+.+...++....+ .+...++.+++.+++++.|++ . ++....+.. ....+++.+.+..
T Consensus 237 ---~~~~~~~p~~~~aa~~al~~~~~-~~~~~~~l~~~~~~l~~~L~~-~-~~~~~~~~rg~~~~~~~~~~~i~~i~~~~ 310 (392)
T PLN03227 237 ---CFSASAPPFLAKADATATAGELA-GPQLLNRLHDSIANLYSTLTN-S-SHPYALKLRNRLVITSDPISPIIYLRLSD 310 (392)
T ss_pred ---cccCCCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHh-c-CCccccccccccccCCCCCCCEEEEEeCC
Confidence 12223344445555556654433 367788899999999999975 2 221111100 0113445555532
Q ss_pred cc----------chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHH
Q 040741 361 VE----------GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVK 428 (457)
Q Consensus 361 ~~----------~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~ 428 (457)
.. ...+...+ +|+.+.....+... .+ +-.....|||+++..+|+||||+++++|++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~---------~~---~~~P~~~iR~~~~~~~t~eei~~~~~~l~~ 378 (392)
T PLN03227 311 QEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKK---------FL---QLVPPPCLRVVANASHTREDIDKLLTVLGE 378 (392)
T ss_pred HHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCC---------cC---CCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 11 12444444 57766431111000 00 011237899999999999999999999999
Q ss_pred HHHHH
Q 040741 429 QVEKL 433 (457)
Q Consensus 429 ~~~~~ 433 (457)
+++++
T Consensus 379 ~~~~~ 383 (392)
T PLN03227 379 AVEAI 383 (392)
T ss_pred HHHHH
Confidence 99875
No 120
>PRK08068 transaminase; Reviewed
Probab=99.95 E-value=1.1e-25 Score=224.01 Aligned_cols=327 Identities=15% Similarity=0.112 Sum_probs=224.0
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh----C--CCCC-cEEEeCCh
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI----G--ASPK-EIIFTSGA 127 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~----g--~~~~-~i~~t~g~ 127 (457)
.+.+.|+.+.+. +.++.+.+++.+.+.... .. .|.......++++++++++ | ++++ ++++|+|+
T Consensus 32 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~------~~--~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~ 103 (389)
T PRK08068 32 HDVINLGQGNPDQPTPEHIVEALQEAAENPA------NH--KYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGG 103 (389)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhCCC------CC--CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCc
Confidence 345777766555 345778888888765310 01 1111123556777777776 5 5676 79999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC--CCCCCHHHHHHhcCCCceEEEEecc
Q 040741 128 TESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA--DGIVNLDELRAAIRPDTGLISVMAV 205 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~le~~i~~~t~li~i~~~ 205 (457)
++++.+++.+++ ++|+.|+++.++|+.+...++.. |++++.++.+. +..+|++++++++++++++|+++++
T Consensus 104 ~~~l~~~~~~~~----~~gd~vlv~~P~y~~~~~~~~~~---g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P 176 (389)
T PRK08068 104 KAGLVELPQCLM----NPGDTILVPDPGYPDYLSGVALA---RAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNYP 176 (389)
T ss_pred HHHHHHHHHHhC----CCCCEEEEcCCCCcchHHHHHhc---CCEEEEeecccccCCCCCHHHHHHhccccceEEEEECC
Confidence 999999989888 89999999999999998877665 99999999874 3467999999999888999999999
Q ss_pred ccccccccCh---HHHHHHHHhcCCcEEEehhhhcC---C-CcccC---C-CCcccEEEeccccccCCCC--ceEEEEec
Q 040741 206 NNEIGVIQPM---EEIGQICKEFKIPFHTDAAQALG---K-IPVDV---E-KWNVSLMSLSGHKIYGPKG--VGALYMRR 272 (457)
Q Consensus 206 ~~~~G~~~~l---~~i~~l~~~~~v~li~D~a~~~g---~-~~~~~---~-~~~~Di~~~s~~K~~g~~G--~G~l~~~~ 272 (457)
+||||.+.+. ++|+++|++|++++|+|+++..- . .+... . ..+..+++.|++|.||.+| +|++++++
T Consensus 177 ~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~ 256 (389)
T PRK08068 177 NNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNE 256 (389)
T ss_pred CCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEecCH
Confidence 9999999995 67888999999999999999631 1 11111 1 1234578899999888666 99999888
Q ss_pred CCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccc
Q 040741 273 RPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIG 352 (457)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 352 (457)
+.++++....... .. +.+.....++..++....+.+++.+++++++++.+.+.|++ + ++.+..+ .. ..
T Consensus 257 ~l~~~l~~~~~~~------~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~-~-g~~~~~~-~g--~~ 324 (389)
T PRK08068 257 SVIEAINLLQDHL------FV-SLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACRE-I-GWEVDAP-KG--SF 324 (389)
T ss_pred HHHHHHHHHHhhc------cC-CCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH-C-CCcccCC-Ce--eE
Confidence 7666654433211 11 22222233333344322345778888899999999999988 4 5554432 11 22
Q ss_pred eEEEEEcc-ccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHH
Q 040741 353 NLNLSFAY-VEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVK 428 (457)
Q Consensus 353 ~~~~~~~~-~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~ 428 (457)
++.+.++. .+..++...+ .||.+.+|..+.. ...++|||+++. +++.+..++++|++
T Consensus 325 ~~~v~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~-----------------~~~~~iRi~~~~--~~~~l~~al~~l~~ 385 (389)
T PRK08068 325 FAWMPVPKGYTSEQFADLLLEKAHVAVAPGNGFGE-----------------HGEGYVRVGLLT--DEERLREAVERIGK 385 (389)
T ss_pred EEEEECCCCCCHHHHHHHHHHhCCEEEecchHhCc-----------------cCCCeEEEEEcC--CHHHHHHHHHHHHH
Confidence 23445542 3556676665 4899988864321 123799999974 45666666666654
No 121
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.95 E-value=1.1e-26 Score=228.84 Aligned_cols=301 Identities=16% Similarity=0.128 Sum_probs=216.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHH-HHhcCcEEEEEeC
Q 040741 100 EVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRH-LQQEGFEITYLPV 178 (457)
Q Consensus 100 ~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~-~~~~G~~v~~v~~ 178 (457)
.+...++++.+++++|.+ +++++++|+.|+.+++. ++ ++||+|+++.+.|.++...+.. +...|+++++++.
T Consensus 46 ~p~~~~le~~la~l~g~~--~~l~~~sG~~al~~~l~-ll----~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~ 118 (378)
T TIGR01329 46 NPTRTALESLLAKLDKAD--RAFAFSSGMAALDVITR-LL----NNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDT 118 (378)
T ss_pred ChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHH-Hh----CCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCC
Confidence 356889999999999984 37777888889887665 55 8999999999999887765543 4566999999986
Q ss_pred CCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEecccc
Q 040741 179 GADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHK 258 (457)
Q Consensus 179 ~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K 258 (457)
. |++++++++++++++|++++++||+|.+.|+++|+++|+++|+++++|++++.+.....+ .+++|++++|++|
T Consensus 119 ~-----d~~~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~~~~l-~~g~Di~v~S~tK 192 (378)
T TIGR01329 119 T-----DLDKVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLLCNPL-ELGADIVYHSATK 192 (378)
T ss_pred C-----CHHHHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChh-hcCCcEEEEecce
Confidence 5 899999999999999999999999999999999999999999999999999776543333 4589999999999
Q ss_pred -ccCCCC--ceEEEEecCCC-ccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHh
Q 040741 259 -IYGPKG--VGALYMRRRPR-IRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIK 334 (457)
Q Consensus 259 -~~g~~G--~G~l~~~~~~~-~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~ 334 (457)
+.|+.+ .|+++++++.. +++.+.....+ ...++....-+ ....+.+..++++..+++..+.+.|+
T Consensus 193 ~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G-------~~~~~~~a~l~----~~~l~tl~~R~e~~~~na~~la~~L~ 261 (378)
T TIGR01329 193 FLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTG-------SGLAPFDCWLL----LRGIKTLAIRIEKQQENARAIAMFLS 261 (378)
T ss_pred eccCCccceeEEEEeCcHHHHHHHHHHHHhcC-------CcCCHHHHHHH----HccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 556655 79988866433 44444332111 12222211111 11123477888888899999999998
Q ss_pred hcCCCeE-EeCC-------------CCCcccceEEEEEcccc-chHHHhcc--cCeEecccCccC----CCCCChh----
Q 040741 335 EKLDGVV-VNGS-------------MERRYIGNLNLSFAYVE-GESLLMGL--KEVAVSSGSACT----SASLEPS---- 389 (457)
Q Consensus 335 ~~~~~~~-~~~~-------------~~~~~~~~~~~~~~~~~-~~~~~~~l--~~i~~~~g~~~~----~~~~~~~---- 389 (457)
+ .|.+. +.-+ ......+++.|.+.+.+ ..++...| .+++++.|...+ +..+.+.
T Consensus 262 ~-~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~ 340 (378)
T TIGR01329 262 T-HPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEATKLFSITVSFGSVNSLISMPCFMSHASIPA 340 (378)
T ss_pred h-CCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCcCcccccCCCCCCceeeCCCccccccCCH
Confidence 8 66652 2211 11234677778875433 45677776 477888887533 3322221
Q ss_pred HHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 390 YVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 390 ~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
-.....|+.+ +.|||+++. ||+|.+++.|++++++.
T Consensus 341 ~~~~~~gi~~----~liR~svGl----E~~~dl~~dl~~al~~~ 376 (378)
T TIGR01329 341 EVREERGLPE----DLVRLSVGI----EDVDDLISDLDIAFVTA 376 (378)
T ss_pred HHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHHhc
Confidence 1234566654 899999996 88999999999998753
No 122
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.95 E-value=1e-25 Score=224.69 Aligned_cols=331 Identities=15% Similarity=0.114 Sum_probs=224.8
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHH----hC---CCCC-cEEEeCC
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADL----IG---ASPK-EIIFTSG 126 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~----~g---~~~~-~i~~t~g 126 (457)
.+.+.|..+.+. ++++.+.+++.+.+.....++.. ....++++.++++ .| ++++ ++++|+|
T Consensus 29 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~Y~~~----------~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G 98 (396)
T PRK09147 29 LPPISLSIGEPKHPTPAFIKDALAANLDGLASYPTT----------AGLPALREAIAAWLERRYGLPALDPATQVLPVNG 98 (396)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHhhhhcCCCCC----------CCCHHHHHHHHHHHHHHhCCCcCCccceEEECCC
Confidence 456777776665 45788888888766433222211 1233455555554 46 5554 7999999
Q ss_pred hHHHHHHHHHHhhhhhcCC---CCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC--CCCCCHHHHHHhcCCCceEEE
Q 040741 127 ATESNNVSIKGVMHFYKDK---KRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA--DGIVNLDELRAAIRPDTGLIS 201 (457)
Q Consensus 127 ~T~a~~~al~~~~~~~~~~---g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~le~~i~~~t~li~ 201 (457)
+++++.++++++. ++ |+.|+++.+.|..+...++.+ |.+++.+|.+. ++.+|++++++.+.+++++++
T Consensus 99 ~~~al~~~~~~l~----~~~~~gd~vlv~~P~y~~~~~~~~~~---g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~ 171 (396)
T PRK09147 99 SREALFAFAQTVI----DRDGPGPLVVCPNPFYQIYEGAALLA---GAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLF 171 (396)
T ss_pred hHHHHHHHHHHHc----CCCCCCCEEEEcCCCccchHHHHHhc---CCEEEEeccCccccCccCHHHHHHHHhhccEEEE
Confidence 9999999999998 78 899999999999888877666 99999999863 346899999988888899999
Q ss_pred EeccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCC-----Cccc-------C--CCCcccEEEeccccccCCCC
Q 040741 202 VMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGK-----IPVD-------V--EKWNVSLMSLSGHKIYGPKG 264 (457)
Q Consensus 202 i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~-----~~~~-------~--~~~~~Di~~~s~~K~~g~~G 264 (457)
+++++||||.+.+ +++|+++|++|+++|++|++++... .+.. . ...+.-+++.|++|.+|.+|
T Consensus 172 l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G 251 (396)
T PRK09147 172 VCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPG 251 (396)
T ss_pred EcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCcc
Confidence 9999999999987 6778888999999999999997421 1111 0 01123488999999877665
Q ss_pred --ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEE
Q 040741 265 --VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVV 342 (457)
Q Consensus 265 --~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 342 (457)
+|+++++++.++++...... .....+.....++.+++. ..+.+.+.++.+++.++.+.+.|.+ . +.+
T Consensus 252 lRiG~~~~~~~l~~~~~~~~~~-------~~~~~~~~~q~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~~-~--~~~ 320 (396)
T PRK09147 252 LRSGFVAGDAALLKKFLLYRTY-------HGCAMPPAVQAASIAAWN-DEAHVRENRALYREKFDAVTPILAP-V--LDV 320 (396)
T ss_pred ceeeeecCCHHHHHHHHHHhhh-------cccCCCHHHHHHHHHHhc-chhHHHHHHHHHHHHHHHHHHHHHH-h--cCC
Confidence 99999887766555433210 111334334443333332 1234677778888888888888877 3 332
Q ss_pred eCCCCCcccceEEEEEccccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHH
Q 040741 343 NGSMERRYIGNLNLSFAYVEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEV 419 (457)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edi 419 (457)
.. +. .+.++.+.++ .+..++...+ +||.+.+|..+.... . ......+++||+++. +++++
T Consensus 321 ~~-p~--~g~f~~~~~~-~~~~~~~~~ll~~~gv~v~pg~~f~~~~---------~--~~~~~~~~iRi~~~~--~~~~l 383 (396)
T PRK09147 321 QL-PD--AGFYLWAKVP-GDDTEFARRLYADYNVTVLPGSYLAREA---------H--GVNPGAGRVRIALVA--PLAEC 383 (396)
T ss_pred CC-CC--eeEEEEEECC-CCHHHHHHHHHHhCCEEEeCCccccccc---------c--CCCCCCCeEEEEecC--CHHHH
Confidence 22 11 1344444444 3455665554 599999987543200 0 011234799999985 57889
Q ss_pred HHHHHHHHHHHH
Q 040741 420 DRAIELTVKQVE 431 (457)
Q Consensus 420 d~~~~~l~~~~~ 431 (457)
++++++|+++++
T Consensus 384 ~~~l~rl~~~~~ 395 (396)
T PRK09147 384 VEAAERIVDFCR 395 (396)
T ss_pred HHHHHHHHHHhc
Confidence 999999988763
No 123
>PRK09265 aminotransferase AlaT; Validated
Probab=99.95 E-value=2.9e-25 Score=221.98 Aligned_cols=335 Identities=15% Similarity=0.140 Sum_probs=224.1
Q ss_pred CCcEEecCCCCC----CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh------CCCCCcEEEeC
Q 040741 56 GRPLYLDMQATT----PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI------GASPKEIIFTS 125 (457)
Q Consensus 56 ~~~i~l~~~~~~----~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~------g~~~~~i~~t~ 125 (457)
.+.+.|+.+.+. +.++++.+++.+.......++. .....++++.+++++ +++++++++|+
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~~~Y~~----------~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~ 102 (404)
T PRK09265 33 HKILKLNIGNPAPFGFEAPDEILRDVIRNLPTAQGYSD----------SKGLFSARKAIMQYYQQKGIPDVDVDDIYIGN 102 (404)
T ss_pred CCeEEecCCCCCcCCCCCCHHHHHHHHHHhhcCCCCCC----------CCCcHHHHHHHHHHHhccCCCCCCcccEEEeC
Confidence 356788776553 3678888888876543221111 123457888888887 67888999999
Q ss_pred ChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC--CCCCCHHHHHHhcCCCceEEEEe
Q 040741 126 GATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA--DGIVNLDELRAAIRPDTGLISVM 203 (457)
Q Consensus 126 g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~le~~i~~~t~li~i~ 203 (457)
|+++++.+++.++. ++||+|+++.++|..+...++.. |.+++.++.+. ++.+|++++++++++++++|+++
T Consensus 103 G~~~~l~~~~~~~~----~~gd~Vlv~~p~y~~~~~~~~~~---g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~ 175 (404)
T PRK09265 103 GVSELIVMAMQALL----NNGDEVLVPAPDYPLWTAAVSLS---GGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVII 175 (404)
T ss_pred ChHHHHHHHHHHhC----CCCCEEEEeCCCCcChHHHHHHc---CCEEEEEecccccCCCCCHHHHHHhccccceEEEEE
Confidence 99999999999887 89999999999999988877665 88888887653 45689999999999899999999
Q ss_pred ccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCC----CcccCCCC--c-ccEEEeccccccCCCC--ceEEEEe
Q 040741 204 AVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGK----IPVDVEKW--N-VSLMSLSGHKIYGPKG--VGALYMR 271 (457)
Q Consensus 204 ~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~----~~~~~~~~--~-~Di~~~s~~K~~g~~G--~G~l~~~ 271 (457)
+++||||.+.+ +++|.++|+++|+++++|++++--. ....+... + .-+++.|++|.+|.+| +|++++.
T Consensus 176 ~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~ 255 (404)
T PRK09265 176 NPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLS 255 (404)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEe
Confidence 99999999999 8889999999999999999986321 11111111 1 2356688999887666 8999974
Q ss_pred c-C-CCccccccccCCccccccccCCCChhHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCC
Q 040741 272 R-R-PRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKK--EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSME 347 (457)
Q Consensus 272 ~-~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 347 (457)
. . ..+.+........ ....+.+.....++..++..... .+.+..+++.++++.+.+.|++ ++++.+..+.
T Consensus 256 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~-~~~~~~~~p~- 329 (404)
T PRK09265 256 GPKKHAKGYIEGLDMLA----SMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNA-IPGVSCVKPK- 329 (404)
T ss_pred CchHHHHHHHHHHHHHh----ccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhc-CCCCcccCCC-
Confidence 2 2 1111111110000 00113444444545555532111 1122224566778888888887 7776655432
Q ss_pred CcccceEEEEEccc-----cchH-HHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHH
Q 040741 348 RRYIGNLNLSFAYV-----EGES-LLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEV 419 (457)
Q Consensus 348 ~~~~~~~~~~~~~~-----~~~~-~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edi 419 (457)
. +.++.+.++.. +..+ +...+ +||.+.+|..+.. ...+++||++. .+.|++
T Consensus 330 ~--g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~-----------------~~~~~~Ri~~~--~~~e~l 388 (404)
T PRK09265 330 G--ALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNW-----------------PEPDHFRIVTL--PRVDDL 388 (404)
T ss_pred c--ceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhCC-----------------CCCCeEEEEeC--CCHHHH
Confidence 1 33444445421 2223 33333 6999998865421 11379999995 578999
Q ss_pred HHHHHHHHHHHHHHH
Q 040741 420 DRAIELTVKQVEKLR 434 (457)
Q Consensus 420 d~~~~~l~~~~~~~~ 434 (457)
+.++++|+++++..+
T Consensus 389 ~~~l~rl~~~l~~~~ 403 (404)
T PRK09265 389 EEAIGRIGRFLSGYR 403 (404)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999887543
No 124
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.95 E-value=2e-25 Score=222.85 Aligned_cols=333 Identities=14% Similarity=0.089 Sum_probs=231.2
Q ss_pred CcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCC--CCCcEEEeCChHHHHHH
Q 040741 57 RPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGA--SPKEIIFTSGATESNNV 133 (457)
Q Consensus 57 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~--~~~~i~~t~g~T~a~~~ 133 (457)
+.+.|..+.+. +.++.+.+++.+.+.+.. . .|....+..+..+.+.+.+++.+|. +++++++|+|+++|+.+
T Consensus 34 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~---~--~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~ 108 (402)
T PRK06107 34 SIVDLTVGEPDFDTPDHIKQAAVAAIERGE---T--KYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFL 108 (402)
T ss_pred CEEEcCCCCCCCCCCHHHHHHHHHHHHcCC---C--CCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHH
Confidence 44677766666 456888888888775321 0 1111112224556666677777676 56789999999999999
Q ss_pred HHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC--CCCCCHHHHHHhcCCCceEEEEecccccccc
Q 040741 134 SIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA--DGIVNLDELRAAIRPDTGLISVMAVNNEIGV 211 (457)
Q Consensus 134 al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~le~~i~~~t~li~i~~~~~~~G~ 211 (457)
++.++. ++|+.|+++.+.|..+...+... |..++.++.+. ++.+|+++++++++++++++++++++||||.
T Consensus 109 ~~~~~~----~~gd~vl~~~p~y~~y~~~~~~~---~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~ 181 (402)
T PRK06107 109 ALMATL----EAGDEVIIPAPYWVSYPDMVLAN---DGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPTGA 181 (402)
T ss_pred HHHHhc----CCCCEEEEecCCCcCHHHHHHHc---CCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCCCc
Confidence 998877 89999999999998887766554 77777787752 3468999999999989999999999999999
Q ss_pred ccC---hHHHHHHHHhc-CCcEEEehhhhcC---CCc-ccCCC-----CcccEEEeccccccCCCC--ceEEEEecCCCc
Q 040741 212 IQP---MEEIGQICKEF-KIPFHTDAAQALG---KIP-VDVEK-----WNVSLMSLSGHKIYGPKG--VGALYMRRRPRI 276 (457)
Q Consensus 212 ~~~---l~~i~~l~~~~-~v~li~D~a~~~g---~~~-~~~~~-----~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~ 276 (457)
+.+ +++|+++|+++ ++++|+|++++.- ..+ ..+.. .+.-+++.|++|.||.+| +|+++++++.++
T Consensus 182 ~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~~~~~ 261 (402)
T PRK06107 182 VYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPADLIA 261 (402)
T ss_pred CcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCHHHHH
Confidence 987 56778889998 9999999998631 111 11111 123577889999888666 799999887666
Q ss_pred cccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEE
Q 040741 277 RVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNL 356 (457)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 356 (457)
++...... ....++.....++..++......+++..+.++++++.+.+.|++ ++++.+..+ +. +.++.+
T Consensus 262 ~~~~~~~~-------~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~-~~g~~~~~p-~g--g~~~~~ 330 (402)
T PRK06107 262 AINKLQSQ-------SSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNA-IPGLSCLVP-DG--AFYLYV 330 (402)
T ss_pred HHHHHHHh-------cccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhc-CCCCcccCC-Cc--ceEEee
Confidence 55543321 11244555555555555322234677788889999999999988 777766543 22 222223
Q ss_pred EEcc------------ccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHH
Q 040741 357 SFAY------------VEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDR 421 (457)
Q Consensus 357 ~~~~------------~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~ 421 (457)
.++. .+..++...+ +||.+.+|..+ |. .+++||+++. +.|++++
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~F--------------g~-----~~~iRis~~~--~~e~l~~ 389 (402)
T PRK06107 331 NCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAY--------------GL-----SPYFRLSIAT--SLETLEE 389 (402)
T ss_pred ecccccccccccccCCCCHHHHHHHHHHhCCEEEeCcccc--------------CC-----CCeEEEEeCC--CHHHHHH
Confidence 3311 1234555443 59999998644 21 1699999995 6899999
Q ss_pred HHHHHHHHHHHH
Q 040741 422 AIELTVKQVEKL 433 (457)
Q Consensus 422 ~~~~l~~~~~~~ 433 (457)
++++|.+.++++
T Consensus 390 ~l~~l~~~l~~~ 401 (402)
T PRK06107 390 ACARIERAVAAL 401 (402)
T ss_pred HHHHHHHHHHhc
Confidence 999999988765
No 125
>PRK12414 putative aminotransferase; Provisional
Probab=99.95 E-value=3.2e-25 Score=220.05 Aligned_cols=331 Identities=17% Similarity=0.093 Sum_probs=228.2
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCC--C-CcEEEeCChHHHH
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGAS--P-KEIIFTSGATESN 131 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~--~-~~i~~t~g~T~a~ 131 (457)
.+.+.|+.+.+. ++++.+.+++.+.+.... . .|....+..+..+.+++.+++++|++ + +++++|+|+++++
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~----~-~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al 103 (384)
T PRK12414 29 HDALNLSQGAPNFAPDPALVEGVARAMRDGH----N-QYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGL 103 (384)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHHhCC----C-CcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHH
Confidence 456888877666 457888998888765311 0 11111122356677777888888874 3 5799999999999
Q ss_pred HHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC-CCCCCHHHHHHhcCCCceEEEEeccccccc
Q 040741 132 NVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA-DGIVNLDELRAAIRPDTGLISVMAVNNEIG 210 (457)
Q Consensus 132 ~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~-~~~~d~~~le~~i~~~t~li~i~~~~~~~G 210 (457)
.+++.+++ ++||+|+++.++|..+...++.. |.+++.++.+. ++.+|++++++++++++++|++++++||||
T Consensus 104 ~~~~~~l~----~~gd~Vlv~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG 176 (384)
T PRK12414 104 YAAISALV----HPGDEVIYFEPSFDSYAPIVRLQ---GATPVAIKLSPEDFRVNWDEVAAAITPRTRMIIVNTPHNPSA 176 (384)
T ss_pred HHHHHHhc----CCCCEEEEeCCCccchHHHHHHc---CCEEEEEecCccccccCHHHHHhhcCcccEEEEEcCCCCCCC
Confidence 99999988 89999999999998887776665 99999999874 457899999999998999999999999999
Q ss_pred cccC---hHHHHHHHHhcCCcEEEehhhhcCCC---cc-cCC---C-CcccEEEeccccccCCCC--ceEEEEecCCCcc
Q 040741 211 VIQP---MEEIGQICKEFKIPFHTDAAQALGKI---PV-DVE---K-WNVSLMSLSGHKIYGPKG--VGALYMRRRPRIR 277 (457)
Q Consensus 211 ~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~---~~-~~~---~-~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~ 277 (457)
.+++ +++|+++|++||+++++|++|..... +. .+. . .+..+++.|++|.+|.+| +||++++++.+++
T Consensus 177 ~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~l~~~ 256 (384)
T PRK12414 177 TVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAELMDE 256 (384)
T ss_pred cCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCHHHHHH
Confidence 9876 77888999999999999999973211 11 111 1 123488999999888666 8999998876665
Q ss_pred ccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEE
Q 040741 278 VEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLS 357 (457)
Q Consensus 278 ~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 357 (457)
+....... ....+.....++..+++.. ....+..+.++++++.+.+.|++ . ++.+..+. . +.++.+.
T Consensus 257 l~~~~~~~-------~~~~s~~~q~a~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~-~-g~~~~~~~-g--g~~~~~~ 323 (384)
T PRK12414 257 IRKVHQFM-------VFSADTPMQHAFAEALAEP-ASYLGLGAFYQRKRDLLARELAG-S-RFELLPSE-G--SFFMLAR 323 (384)
T ss_pred HHHHHhhe-------ecCCCcHHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHHHHHHh-C-CCeecCCC-c--ceEEEEc
Confidence 54433210 1133444444444444321 12345677788899999999998 4 56654321 1 1222233
Q ss_pred Ecc---ccchHHH-hcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHH
Q 040741 358 FAY---VEGESLL-MGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVK 428 (457)
Q Consensus 358 ~~~---~~~~~~~-~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~ 428 (457)
++. ....++. ..+ +||.+.+|..|... ....++|||+++. ++++++..+++|.+
T Consensus 324 ~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~---------------~~~~~~iRis~~~--~~~~~~~~~~rl~~ 383 (384)
T PRK12414 324 FRHFSDESDSDFVLRLIRDARVATIPLSAFYTD---------------GTDTGLIRLSFSK--DDATLVEGARRLCS 383 (384)
T ss_pred ccccCCCCHHHHHHHHHHhCCEEEecchhhcCC---------------CCCCCEEEEEecC--CHHHHHHHHHHHhh
Confidence 432 1233444 333 69999998755321 1113799999995 57888888888753
No 126
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.95 E-value=1.9e-25 Score=207.30 Aligned_cols=325 Identities=17% Similarity=0.229 Sum_probs=249.7
Q ss_pred CCCHHHHHHHHHHHhhc-cCCCCCCccchhhhHHHHHHHHHHHHHHHhCCC--CCcEEEeCChHHHHHHHHHHhhhhhcC
Q 040741 68 PVDPRVLDAMLPFYLSR-YGNPHSRTHLFGWESEVAVETARSQIADLIGAS--PKEIIFTSGATESNNVSIKGVMHFYKD 144 (457)
Q Consensus 68 ~~~~~v~~a~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~--~~~i~~t~g~T~a~~~al~~~~~~~~~ 144 (457)
+.+|++++|+.+..+.. +|+| +..++....+..+.++..+.+ ++.++|++|--.++.++++.+. +
T Consensus 38 ~~pp~i~~Al~~rvdhGvfGY~--------~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T----~ 105 (388)
T COG1168 38 PTPPEIIEALRERVDHGVFGYP--------YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALT----K 105 (388)
T ss_pred CCCHHHHHHHHHHHhcCCCCCC--------CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhC----c
Confidence 67899999999998743 4443 345568888999999988874 5569999999999999999999 9
Q ss_pred CCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC-CCC--CCCHHHHHHhcCCC-ceEEEEeccccccccccC---hHH
Q 040741 145 KKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG-ADG--IVNLDELRAAIRPD-TGLISVMAVNNEIGVIQP---MEE 217 (457)
Q Consensus 145 ~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~-~~~--~~d~~~le~~i~~~-t~li~i~~~~~~~G~~~~---l~~ 217 (457)
+||.|++..+.|+.+...+..- |-++...|.. .++ .+|+++||+++.+. .+++++|+||||+|.+-. |.+
T Consensus 106 ~gd~Vvi~tPvY~PF~~~i~~n---~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~ 182 (388)
T COG1168 106 PGDGVVIQTPVYPPFYNAIKLN---GRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRK 182 (388)
T ss_pred CCCeeEecCCCchHHHHHHhhc---CcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHH
Confidence 9999999999999999888766 8888888876 444 56999999988654 699999999999999965 888
Q ss_pred HHHHHHhcCCcEEEehhhh----cCCC--ccc-CCCC--cccEEEeccccccCCCC--ceEEEEecCC-CccccccccCC
Q 040741 218 IGQICKEFKIPFHTDAAQA----LGKI--PVD-VEKW--NVSLMSLSGHKIYGPKG--VGALYMRRRP-RIRVEPLINGG 285 (457)
Q Consensus 218 i~~l~~~~~v~li~D~a~~----~g~~--~~~-~~~~--~~Di~~~s~~K~~g~~G--~G~l~~~~~~-~~~~~~~~~~~ 285 (457)
|.+||++||+.||.|+.|+ .|.. ++. +... +..+.+.|.+|.|...| ++.++..++. +.+....+..
T Consensus 183 i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~- 261 (388)
T COG1168 183 IAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLKR- 261 (388)
T ss_pred HHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHHHHH-
Confidence 9999999999999999997 2322 221 2221 34577888899887665 6777766643 2333322221
Q ss_pred ccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchH
Q 040741 286 GQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGES 365 (457)
Q Consensus 286 ~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (457)
...+.+|..++.|..+|-+.....+++..+.++.+.+++.+.+.+.+|++++.. +++.+..++.++--+.++..
T Consensus 262 -----~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~-p~gTYL~WLD~r~l~l~d~~ 335 (388)
T COG1168 262 -----NGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTE-PQGTYLAWLDCRELGLDDSE 335 (388)
T ss_pred -----hcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEec-CCCceeeeeeccccCCChHH
Confidence 112467888888888888888888999999999999999999999899999987 44555555555444455545
Q ss_pred HHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 366 LLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 366 ~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
+...+ .+|++..|..+.. .+.+.+|+.+. ++++-+++++++|+.+++.+
T Consensus 336 l~~~ll~~akVal~~G~~FG~-----------------~g~gf~RlN~a--cpr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 336 LAEFLLEEAKVALSPGSTFGE-----------------EGSGFVRLNFA--CPRAILEEALERLKRALKKR 387 (388)
T ss_pred HHHHHHHhhcEeccCCCccCc-----------------CCCceEEEecC--CCHHHHHHHHHHHHHHHhcc
Confidence 54444 6899998875432 23489999987 47899999999999887653
No 127
>PLN02452 phosphoserine transaminase
Probab=99.95 E-value=1.4e-25 Score=218.12 Aligned_cols=337 Identities=18% Similarity=0.169 Sum_probs=246.0
Q ss_pred EEecCCCCCCCCHHHHHHHHHHHhhccCCCCC--CccchhhhHHHHHHHHHHHHHHHhCCCCC-c-EEEeCChHHHHHHH
Q 040741 59 LYLDMQATTPVDPRVLDAMLPFYLSRYGNPHS--RTHLFGWESEVAVETARSQIADLIGASPK-E-IIFTSGATESNNVS 134 (457)
Q Consensus 59 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~la~~~g~~~~-~-i~~t~g~T~a~~~a 134 (457)
+|+-.+|+..+|++|++++.+.+.++.+...+ -....+..+.+.+.++++.|+++++.+.+ + +++++|||.++.++
T Consensus 8 ~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~ 87 (365)
T PLN02452 8 VFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAI 87 (365)
T ss_pred eEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHH
Confidence 67888899999999999999986543221111 01122556678999999999999998543 3 56668899999999
Q ss_pred HHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCC---CCCHHHHHHhcCCCceEEEEecccccccc
Q 040741 135 IKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADG---IVNLDELRAAIRPDTGLISVMAVNNEIGV 211 (457)
Q Consensus 135 l~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~---~~d~~~le~~i~~~t~li~i~~~~~~~G~ 211 (457)
+.++. .+++++++-.....+-. +++.++..|...+.......+ .+|+++++ .+++.+.|.+++..+.+|+
T Consensus 88 ~~nl~----~~~~~~l~~~~G~fg~r-~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~hnETstGv 160 (365)
T PLN02452 88 PLNLC----KPGDKADFVVTGSWSKK-AAKEAKKYCKTNVIASGKDEKYTKIPSVSEWE--LTPDAKFVHICANETIHGV 160 (365)
T ss_pred HHhcC----CCCCeEEEEECCHHHHH-HHHHHHHhCCCcEEEecCCCCCCCCCChHHcC--CCCCCcEEEECCCCCCCcE
Confidence 99998 67787766554444433 345556667654444323222 56777653 2456789999999999999
Q ss_pred c-cChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCCceEEEEecCCCccccccccCC---c-
Q 040741 212 I-QPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGG---G- 286 (457)
Q Consensus 212 ~-~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~---~- 286 (457)
. .|++++. ++++++|+++++|+.++++.++++|+ +|.||.+||+|+|+++++++++++..+..... .
T Consensus 161 ~~~~~~~i~------~~~lvVDa~Ss~g~~pidv~~~~v~~--~saqK~lGP~Gl~~v~vr~~~l~~~~~~~~~~~~~~~ 232 (365)
T PLN02452 161 EFKDYPDVG------NVPLVADMSSNFLSKPVDVSKYGVIY--AGAQKNVGPSGVTIVIIRKDLIGNARPITPGMLDYKI 232 (365)
T ss_pred ecCcccccC------CCeEEEECCccccCcccCHHHcCEEE--EecccccCCCCeEEEEEcHHHHhhcccCCCchhhHHH
Confidence 5 7788775 38999999999999999999888755 69999889999999999998877654332211 1
Q ss_pred -cccccccCCCChhHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHhhcCCCeEEe-CCCCCcccceEEEEEcccc
Q 040741 287 -QERGIRSGTLPTPLIVGFGSACEIAKK--EMDYDHKRITALHDRLLNGIKEKLDGVVVN-GSMERRYIGNLNLSFAYVE 362 (457)
Q Consensus 287 -~~~~~~~~t~~~~~~~al~~al~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 362 (457)
.......+|||+..++++..+++++.+ +++.+.++.+++++++++.|++ .+++... .+++.+...++.|.+++.+
T Consensus 233 ~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~-~~G~y~~~~~~~~rs~~~vsF~~~~~~ 311 (365)
T PLN02452 233 HAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDE-SNGFYVCPVEKSVRSLMNVPFTLGGSE 311 (365)
T ss_pred HHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHh-CCCcccCCCChHHhCCeEEEEEcCCch
Confidence 112334579999999999999999886 5999999999999999999998 7777211 1122344556666665432
Q ss_pred -chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 363 -GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 363 -~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
..++...+ +|+....|... -+.+|+++-..++.++++.+++.|+++.++
T Consensus 312 ~~~~f~~~~~~~g~~~~~G~r~---------------------~gg~R~s~yna~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 312 LEAEFVKEAAKAGMVQLKGHRS---------------------VGGMRASIYNAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred hHHHHHHHHHHCCCcccCCccc---------------------cCceEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 33455555 57766665421 134999999999999999999999998764
No 128
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.95 E-value=4.6e-26 Score=225.42 Aligned_cols=306 Identities=16% Similarity=0.169 Sum_probs=219.9
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHH-HhcCcEE
Q 040741 95 FGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHL-QQEGFEI 173 (457)
Q Consensus 95 ~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~-~~~G~~v 173 (457)
|++..++...++++.+++++|.+. .+++++|+.|+.+++.++. ++|++|+++.+.|.+....+... ...|+++
T Consensus 55 y~r~~~pt~~~Le~~lA~l~G~~~--al~~~sG~~Ai~~~l~al~----~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~ 128 (386)
T PRK06767 55 YSRLGNPTVKLFEERMAVLEGGEE--ALAFGSGMAAISATLIGFL----KAGDHIICSNGLYGCTYGFLEVLEEKFMITH 128 (386)
T ss_pred ccCCCCcchHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHHh----CCCCEEEEcCCcHHHHHHHHHHHHhhcCeEE
Confidence 343344678899999999999754 7778888999999998887 89999999999998887766543 4457777
Q ss_pred EEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEE
Q 040741 174 TYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMS 253 (457)
Q Consensus 174 ~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~ 253 (457)
.+++.. |+++++++++++|++|++++++||+|.+.|+++|.++|+++|+++++|++++.+....++ ..++|+++
T Consensus 129 ~~~~~~-----d~~~l~~~i~~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~pl-~~g~Div~ 202 (386)
T PRK06767 129 SFCDME-----TEADIENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPL-ELGCDAVV 202 (386)
T ss_pred EEeCCC-----CHHHHHHhhCcCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCCch-hcCCcEEE
Confidence 777543 899999999999999999999999999999999999999999999999999865443333 35789999
Q ss_pred eccccccCCCC---ceEEEEecCCCcccc-ccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 040741 254 LSGHKIYGPKG---VGALYMRRRPRIRVE-PLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRL 329 (457)
Q Consensus 254 ~s~~K~~g~~G---~G~l~~~~~~~~~~~-~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l 329 (457)
.|++|+++..| .|+++++++.+.++. ...... .+..++...+.+..++ ..+..++++.++++.++
T Consensus 203 ~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~-------g~~~~~~~a~l~~~~L----~tl~~r~~~~~~~a~~l 271 (386)
T PRK06767 203 HSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDI-------GGIMAPFDAWLLLRGL----KTLAVRMDRHCDNAEKI 271 (386)
T ss_pred ecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHh-------CCCCCHHHHHHHHcCC----CcHHHHHHHHHHHHHHH
Confidence 99999776544 588988876554432 221111 1123322222221111 23567778889999999
Q ss_pred HHHHhhcCCCeEEeCCCC--------CcccceEEEEEccc--cchHHHhcc--cCeEecccCccCCC----CCCh----h
Q 040741 330 LNGIKEKLDGVVVNGSME--------RRYIGNLNLSFAYV--EGESLLMGL--KEVAVSSGSACTSA----SLEP----S 389 (457)
Q Consensus 330 ~~~l~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~--~~~~~~~~l--~~i~~~~g~~~~~~----~~~~----~ 389 (457)
.+.|++ .|++..+..|. ...++++.|.+++. +...+...| .++.++-|...+.. ...+ .
T Consensus 272 a~~L~~-~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~ 350 (386)
T PRK06767 272 VSFLKN-HDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTETLIQHPATMTHAAIPA 350 (386)
T ss_pred HHHHHc-CCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcCccccCCCccccccCCH
Confidence 999999 88886443221 12467788887632 345677777 46777777654322 1111 1
Q ss_pred HHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 390 YVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 390 ~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
-.....|+.+ +.|||+++. ||+|.+++.|+++++.
T Consensus 351 ~~~~~~gi~~----~l~R~svGl----E~~~dl~~dl~~al~~ 385 (386)
T PRK06767 351 ELRQEMGIYD----NLIRLSVGL----ESWEDIVSDLEQALKK 385 (386)
T ss_pred HHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 1223456554 899999996 7888999999988864
No 129
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.95 E-value=3.4e-26 Score=225.43 Aligned_cols=306 Identities=17% Similarity=0.161 Sum_probs=220.5
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHH-HHHhcCc
Q 040741 93 HLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCR-HLQQEGF 171 (457)
Q Consensus 93 ~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~G~ 171 (457)
+.|++...+...++++.+++++|.+. +++++||++|+.+++.++. ++|++|+++.+.|.+....+. .+...|+
T Consensus 32 ~~y~r~~~p~~~~le~~la~l~g~~~--a~~~~sG~~Ai~~~l~~l~----~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~ 105 (369)
T cd00614 32 YIYSRIGNPTVDALEKKLAALEGGEA--ALAFSSGMAAISTVLLALL----KAGDHVVASDDLYGGTYRLFERLLPKLGI 105 (369)
T ss_pred ceeECCCChhHHHHHHHHHHHHCCCC--EEEEcCHHHHHHHHHHHHc----CCCCEEEECCCCcchHHHHHHHHHhhcCe
Confidence 44555556889999999999999754 8888999999999999988 899999999999988876554 3356699
Q ss_pred EEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccE
Q 040741 172 EITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSL 251 (457)
Q Consensus 172 ~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di 251 (457)
++.+++.+ |++++++++++++++|++++++||+|.+.|+++|.++|+++|+++++|++++.+... ....+++|+
T Consensus 106 ~~~~v~~~-----d~~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~-~~~~~g~Di 179 (369)
T cd00614 106 EVTFVDPD-----DPEALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQ-RPLELGADI 179 (369)
T ss_pred EEEEeCCC-----CHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcC-ChhhhCCcE
Confidence 99998866 799999999999999999999999999999999999999999999999999876542 223457899
Q ss_pred EEeccccccCCCC---ceEEEEec-CCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 040741 252 MSLSGHKIYGPKG---VGALYMRR-RPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHD 327 (457)
Q Consensus 252 ~~~s~~K~~g~~G---~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~ 327 (457)
++.|++|++|+.| +|+++.++ +..+++....... .+..++.....+..++ +.+..++++..++++
T Consensus 180 vv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~-------g~~~~p~~a~~~l~~l----~tl~~r~~~~~~na~ 248 (369)
T cd00614 180 VVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLAL-------GTILSPFDAWLLLRGL----KTLPLRMERHSENAL 248 (369)
T ss_pred EEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhh-------CCCCCHHHHHHHHcCC----CCHHHHHHHHHHHHH
Confidence 9999999765433 68898876 5555554333211 1233433333222222 345667888899999
Q ss_pred HHHHHHhhcCCCeEEeCCC--------------CCcccceEEEEEcc--ccchHHHhccc--CeEecccCccC----CCC
Q 040741 328 RLLNGIKEKLDGVVVNGSM--------------ERRYIGNLNLSFAY--VEGESLLMGLK--EVAVSSGSACT----SAS 385 (457)
Q Consensus 328 ~l~~~l~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~--~~~~~~~~~l~--~i~~~~g~~~~----~~~ 385 (457)
++.+.|++ .|++..+-.+ ....++++.|.+.+ .....++..|+ .++.+-|...+ +..
T Consensus 249 ~la~~L~~-~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~ 327 (369)
T cd00614 249 KVAEFLEK-HPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNALKLFSLAVSLGGVESLVEHPAS 327 (369)
T ss_pred HHHHHHHc-CCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHHcCCcceEcccCCCCceeeeCCcc
Confidence 99999998 7765322111 12347777777763 12345555553 44555565433 222
Q ss_pred CChh----HHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHH
Q 040741 386 LEPS----YVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 386 ~~~~----~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~ 430 (457)
..+. -.....|+++ +.||++++. ||+|.+++.|++++
T Consensus 328 ~~~~~~~~~~~~~~g~~~----~liR~svGl----E~~~dl~~dl~~al 368 (369)
T cd00614 328 MTHSQLPPEERAAAGITP----GLVRLSVGI----EDVEDLIADLEQAL 368 (369)
T ss_pred cccccCCHHHHHhcCCCC----CeEEEEeCc----CCHHHHHHHHHHhh
Confidence 2221 1233556654 899999997 78888999988875
No 130
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.95 E-value=4.9e-26 Score=225.57 Aligned_cols=338 Identities=15% Similarity=0.140 Sum_probs=231.2
Q ss_pred CCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHH
Q 040741 56 GRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSI 135 (457)
Q Consensus 56 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al 135 (457)
..+||++.....+.++++.+... +.+. .+.|++...+...++++.+++++|+++ .+.+++|+.|+..++
T Consensus 29 ~~pi~~~~~~~~~~~~~~~~~~~-------~~~~--~~~y~r~~~p~~~~Le~~lA~l~G~~~--~~~~~sG~~Ai~~~l 97 (398)
T PRK07504 29 SEALFLTQGFVYDTAEAAEARFK-------GEDP--GFIYSRYSNPTVDMFEKRMCALEGAED--ARATASGMAAVTAAI 97 (398)
T ss_pred cCCeECCCCccCCCHHHHHHHhc-------cCcC--CceeecCCCchHHHHHHHHHHHhCCCe--eeEecCHHHHHHHHH
Confidence 46799988776665555443211 1111 233333334678899999999999976 556788999998888
Q ss_pred HHhhhhhcCCCCEEEEcCCCCcchHHHHHH-HHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccC
Q 040741 136 KGVMHFYKDKKRHVITTQTEHKCVLDSCRH-LQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQP 214 (457)
Q Consensus 136 ~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~-~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~ 214 (457)
.++. ++||+|+++.+.|.+....+.. +...|++++.++. +|+++++++++++|++|++++++||+|.+.|
T Consensus 98 ~~~l----~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~-----~d~e~l~~ai~~~tklV~lesp~NptG~v~d 168 (398)
T PRK07504 98 LCQV----KAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDG-----LDLDNWEKAVRPNTKVFFLESPTNPTLEVID 168 (398)
T ss_pred HHHh----CCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECC-----CCHHHHHHhcCcCceEEEEECCCCCCcEecC
Confidence 8777 8999999999999887665543 3456999988862 5899999999999999999999999999999
Q ss_pred hHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCC--c-eEEEEecCCCcc-ccccccCCccccc
Q 040741 215 MEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKG--V-GALYMRRRPRIR-VEPLINGGGQERG 290 (457)
Q Consensus 215 l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G--~-G~l~~~~~~~~~-~~~~~~~~~~~~~ 290 (457)
+++|.++|+++|+++++|++++.+... .....++|+++.|++|++|..| + |+++.+++.+.+ +.......
T Consensus 169 l~~I~~la~~~gi~lvvD~a~a~~~~~-~~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~----- 242 (398)
T PRK07504 169 IAAVAKIANQAGAKLVVDNVFATPLFQ-KPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHT----- 242 (398)
T ss_pred HHHHHHHHHHcCCEEEEECCccccccC-CchhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHh-----
Confidence 999999999999999999999876543 2234578999999999776443 4 566665543332 22111111
Q ss_pred cccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeE-EeCC--CCC-----------cccceEEE
Q 040741 291 IRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVV-VNGS--MER-----------RYIGNLNL 356 (457)
Q Consensus 291 ~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~--~~~-----------~~~~~~~~ 356 (457)
...++...++.+...+ +.+..+.++..+++.++.+.|++ .|++. ++-+ +.. ..++++.|
T Consensus 243 --g~~~s~~~A~~~l~~L----~tl~~R~~~~~~na~~la~~L~~-~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~ 315 (398)
T PRK07504 243 --GPSLSPFNAWTLLKGL----ETLPVRVRQQTESAAAIADFLAG-HPKVARVIYPGRADHPQADIIAKQMTGGSTLVAF 315 (398)
T ss_pred --CCCCCHHHHHHHHhcc----chHHHHHHHHHHHHHHHHHHHHc-CCCccEEECCCCCCCccHHHHHHhCCCCccEEEE
Confidence 1133333333332232 23567777788999999999998 77764 2211 111 24678888
Q ss_pred EEccc--cchHHHhccc--CeEecccCccC----CCCCC----hhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHH
Q 040741 357 SFAYV--EGESLLMGLK--EVAVSSGSACT----SASLE----PSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIE 424 (457)
Q Consensus 357 ~~~~~--~~~~~~~~l~--~i~~~~g~~~~----~~~~~----~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~ 424 (457)
.+.+- ....++..|+ .++++-|...+ +.... +.-..+..|+.+ +.|||+++. ||.|.+++
T Consensus 316 ~~~~~~~~~~~~~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~----~liR~svGl----E~~~dl~~ 387 (398)
T PRK07504 316 ELKGGKEAAFRFLNALKIVRISNNLGDAKSLITHPATTTHKNLSPEARAELGISE----GFLRLSAGL----EDTDDLIE 387 (398)
T ss_pred EeCCCHHHHHHHHHhCCcceecccCCCCCeeeeCCCCCCcccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHH
Confidence 88531 1235566663 55555565433 22222 122345677765 899999997 78888999
Q ss_pred HHHHHHHHHH
Q 040741 425 LTVKQVEKLR 434 (457)
Q Consensus 425 ~l~~~~~~~~ 434 (457)
.|++++++.+
T Consensus 388 dl~~al~~~~ 397 (398)
T PRK07504 388 DLAAALKKVR 397 (398)
T ss_pred HHHHHHHhhh
Confidence 9998887654
No 131
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.95 E-value=4.2e-25 Score=235.00 Aligned_cols=308 Identities=15% Similarity=0.125 Sum_probs=229.1
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCcEEEeCChH----HHHHHHHHHhhhhhcCCCC----EEEEcCCCCcchHHHHHHHHhc
Q 040741 98 ESEVAVETARSQIADLIGASPKEIIFTSGAT----ESNNVSIKGVMHFYKDKKR----HVITTQTEHKCVLDSCRHLQQE 169 (457)
Q Consensus 98 ~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T----~a~~~al~~~~~~~~~~g~----~vi~~~~~h~~~~~~~~~~~~~ 169 (457)
+..+.+.++++++++++|+ +++.|++++| ++++++++++.. .+|+ +||++..+|.++...+...
T Consensus 565 g~~~~~~~~r~~la~i~g~--~~v~f~pnaga~ge~a~~~vi~~~~~---~~Gd~~r~~vli~~~aH~sn~a~a~~~--- 636 (993)
T PLN02414 565 GYQEMFEDLGDLLCEITGF--DSFSLQPNAGAAGEYAGLMVIRAYHL---SRGDHHRNVCIIPVSAHGTNPASAAMC--- 636 (993)
T ss_pred HHHHHHHHHHHHHHHHhCC--CeEEEcCCCcHHHHHHHHHHHHHHHh---ccCCCCCCEEEeCCCcCccCHHHHHHC---
Confidence 4457899999999999999 4599999999 899999998863 3366 8999999999999887664
Q ss_pred CcEEEEEeCCCCCCCCHHHHHHhcCC---CceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCC-CcccCC
Q 040741 170 GFEITYLPVGADGIVNLDELRAAIRP---DTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGK-IPVDVE 245 (457)
Q Consensus 170 G~~v~~v~~~~~~~~d~~~le~~i~~---~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~-~~~~~~ 245 (457)
|+++++++++.+|.+|+++|++++++ ++++|++++++|.+|...|+++|+++||++|+++++|+|+..+. ...++.
T Consensus 637 G~~vv~v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~ 716 (993)
T PLN02414 637 GMKIVVVGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPG 716 (993)
T ss_pred CCEEEEeccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCcc
Confidence 99999999998999999999999984 78999999999999999999999999999999999999999887 344566
Q ss_pred CCcccEEEecccc-cc-----CCCCceEEEEecCCCccccccccC--Cccccccc---cCCCCh---hHHHHHHHHHHHH
Q 040741 246 KWNVSLMSLSGHK-IY-----GPKGVGALYMRRRPRIRVEPLING--GGQERGIR---SGTLPT---PLIVGFGSACEIA 311 (457)
Q Consensus 246 ~~~~Di~~~s~~K-~~-----g~~G~G~l~~~~~~~~~~~~~~~~--~~~~~~~~---~~t~~~---~~~~al~~al~~~ 311 (457)
++++|++++|.|| ++ |++|+|++++++.+...+.....+ .+..++.. .|+.+. .....+..|..++
T Consensus 717 ~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi 796 (993)
T PLN02414 717 FIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYI 796 (993)
T ss_pred ccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHH
Confidence 8899999999999 55 355699999997544333221111 01111111 244333 2334444555554
Q ss_pred H----HhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEc------cccchHHHhcc--cCeEecccC
Q 040741 312 K----KEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFA------YVEGESLLMGL--KEVAVSSGS 379 (457)
Q Consensus 312 ~----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l--~~i~~~~g~ 379 (457)
. +++.+..++...+++|+++.|.+ ..++...++.+ .+..-+.+.+. +++..++...| .||....-+
T Consensus 797 ~~lG~~Gl~~~a~~a~~nAnYl~~rL~~-~~~~~~~~~~~-~~~hEfv~~~~~l~~~~g~~~~di~krL~d~Gihapt~~ 874 (993)
T PLN02414 797 AMMGSEGLTDASKIAILNANYMAKRLEG-HYPVLFRGKNG-TCAHEFIIDLRPFKNTAGIEPEDVAKRLMDYGFHAPTMS 874 (993)
T ss_pred HHHCHhHHHHHHHHHHHHHHHHHHHHHh-hCCccccCCCC-CeeeeEEEeccccccccCCCHHHHHHHHHHcCcEEeeec
Confidence 3 34777788999999999999988 55555444322 22222333333 23446677776 455432110
Q ss_pred ccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHh
Q 040741 380 ACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLRE 435 (457)
Q Consensus 380 ~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~ 435 (457)
+ + ..+.+|++++.+.+++|+|+++++|+...++..+
T Consensus 875 ---------------~--p---v~~~lmiepTE~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 875 ---------------W--P---VPGTLMIEPTESESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred ---------------c--c---cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 1 0 1389999999999999999999999999988875
No 132
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.95 E-value=1.6e-25 Score=209.89 Aligned_cols=267 Identities=19% Similarity=0.245 Sum_probs=205.1
Q ss_pred ecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCC---CCCcEEEeCChHHHHHHHHH
Q 040741 61 LDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGA---SPKEIIFTSGATESNNVSIK 136 (457)
Q Consensus 61 l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~---~~~~i~~t~g~T~a~~~al~ 136 (457)
|.-+-++ +.|+-+.+++.+......-+ .+..+++..+....+++.++++.|. ..++|++|.|+.+++..+++
T Consensus 36 LgqGfp~~~~P~fv~ea~~~~~~~~~~~----qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~ 111 (420)
T KOG0257|consen 36 LGQGFPDFPPPKFVTEAAKNAAKEPSTN----QYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALL 111 (420)
T ss_pred ccCCCCCCCCcHHHHHHHHHHhccchhc----cccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHH
Confidence 5555555 78888999999987653222 3444566668889999999998875 34579999999999999999
Q ss_pred HhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC--------CCCCCCHHHHHHhcCCCceEEEEeccccc
Q 040741 137 GVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG--------ADGIVNLDELRAAIRPDTGLISVMAVNNE 208 (457)
Q Consensus 137 ~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~--------~~~~~d~~~le~~i~~~t~li~i~~~~~~ 208 (457)
+++ ++||+||+.++.|.++......+ |.++++++.. .++.+|++++|.+++++|++|+++.||||
T Consensus 112 ~l~----~~GDeVii~eP~fd~Y~~~~~ma---G~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNP 184 (420)
T KOG0257|consen 112 GLL----NPGDEVIVFEPFFDCYIPQVVMA---GGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNP 184 (420)
T ss_pred HHc----CCCCEEEEecCcchhhhhHHhhc---CCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCCC
Confidence 999 99999999999999999998887 9999888876 45789999999999999999999999999
Q ss_pred cccccC---hHHHHHHHHhcCCcEEEehhhhc----CC--Ccc--cCCCCcccEEEeccccccCCCC--ceEEEEecCCC
Q 040741 209 IGVIQP---MEEIGQICKEFKIPFHTDAAQAL----GK--IPV--DVEKWNVSLMSLSGHKIYGPKG--VGALYMRRRPR 275 (457)
Q Consensus 209 ~G~~~~---l~~i~~l~~~~~v~li~D~a~~~----g~--~~~--~~~~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~ 275 (457)
+|.+++ |++|+++|++||+++|.|++|.. |. ..+ ....+...+-++|++|.||..| +||++..+.+.
T Consensus 185 tGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~ 264 (420)
T KOG0257|consen 185 TGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLY 264 (420)
T ss_pred cCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechHHhh
Confidence 999988 88999999999999999999864 21 111 1233456788999999998777 99999955444
Q ss_pred ccccccccCCccccccccCCCChhHHHHHHHHHHHHHH-------h-hHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCC
Q 040741 276 IRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKK-------E-MDYDHKRITALHDRLLNGIKEKLDGVVVNGSME 347 (457)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~-------~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 347 (457)
....+.... +.. +.+.+...|..+|+..... + ...+.+.++++++.+.+.|.+ + ++.+.++..
T Consensus 265 ~~~~~vh~~------~~~-~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~-l-g~~v~~p~g 335 (420)
T KOG0257|consen 265 SALFPVHQN------FVF-TCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEE-L-GLKVTGPEG 335 (420)
T ss_pred hhHHHHhhc------ccc-ccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHh-c-CCccccCCC
Confidence 444433321 222 2333333334344443331 2 344888999999999999999 5 898887543
No 133
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.95 E-value=3.7e-25 Score=220.21 Aligned_cols=320 Identities=16% Similarity=0.128 Sum_probs=222.5
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCC
Q 040741 68 PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKR 147 (457)
Q Consensus 68 ~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~ 147 (457)
+.++.+.+++.+.+... +...+ .+....+..+...++++++++++|.+ +.++++ +|++++..++.++. ++|+
T Consensus 47 ~~~~~~~~a~~~~~~~~-~~~~~-~~~~~~g~~~l~~~l~~~l~~~~g~~-~~i~~~-sG~~a~~~a~~~~~----~~gd 118 (385)
T TIGR01825 47 ADHPRLKEAAAQAIQQY-GVGAG-AVRTIAGTLRLHEELEEKLAKFKKTE-AALVFQ-SGFNTNQGVLSALL----RKGD 118 (385)
T ss_pred CCCHHHHHHHHHHHHHc-CCCCC-ccCcccCCcHHHHHHHHHHHHHhCCC-cEEEEC-cHHHHHHHHHHHhC----CCCC
Confidence 47889999999987642 11110 11111223468889999999999964 345555 55788888888887 8999
Q ss_pred EEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcC----CCceEEEEeccccccccccChHHHHHHHH
Q 040741 148 HVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIR----PDTGLISVMAVNNEIGVIQPMEEIGQICK 223 (457)
Q Consensus 148 ~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~----~~t~li~i~~~~~~~G~~~~l~~i~~l~~ 223 (457)
.|+++.+.|+++..++... |.++..++ .+|++++++.++ +++++|++++++|++|.+.|+++|.++|+
T Consensus 119 ~vi~~~~~~~~~~~~~~~~---g~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~ 190 (385)
T TIGR01825 119 IVLSDELNHASIIDGLRLT---KATKKIYK-----HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAE 190 (385)
T ss_pred EEEEEccccHHHHHHHHhc---CCceEEeC-----CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHH
Confidence 9999999999988766554 77776654 368888888765 36889999999999999999999999999
Q ss_pred hcCCcEEEehhhhcCCCc---------ccCCCCcccEEEeccccccCCCCceEEEEecCCCccccccccCCccccccccC
Q 040741 224 EFKIPFHTDAAQALGKIP---------VDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSG 294 (457)
Q Consensus 224 ~~~v~li~D~a~~~g~~~---------~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (457)
+||+++|+|++|+.+..+ +++. .+.|+++.|++|.+|..| |+++.+++..+.+......+ ...+
T Consensus 191 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~g-G~~~~~~~~~~~~~~~~~~~-----~~~~ 263 (385)
T TIGR01825 191 RYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGVVG-GYAAGHKELIEYLKNRARPF-----LFST 263 (385)
T ss_pred HhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhhcCC-CEEecCHHHHHHHHHhCccc-----cccC
Confidence 999999999999765432 2222 467899999999888776 88888776555543221110 1112
Q ss_pred CCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcc-ccchHHHhcc--c
Q 040741 295 TLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAY-VEGESLLMGL--K 371 (457)
Q Consensus 295 t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l--~ 371 (457)
..++..++++.++++...+. .+..++..++++++.+.|.+ + ++.+..+. .+.+.+.+.. .+..++...| +
T Consensus 264 ~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~----~~~~~~~~~~~~~~~~~~~~L~~~ 336 (385)
T TIGR01825 264 AQPPAVVAALAAAVDELQRS-PELMERLWDNTRFFKAGLGK-L-GYDTGGSE----TPITPVVIGDEKAAQEFSRRLFDE 336 (385)
T ss_pred CCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHH-c-CCCCCCCC----CCEEEEEECCHHHHHHHHHHHHHC
Confidence 34556666777777665432 35677778889999999988 4 66655432 1233333331 1234565555 5
Q ss_pred CeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 372 EVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 372 ~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
||.+.++.+... ..+..+||++++..+++||+++++++|+++++++
T Consensus 337 gi~v~~~~~~~~----------------~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~~ 382 (385)
T TIGR01825 337 GIFAQSIVFPTV----------------PRGTARIRNIPTAEHTKDDLDQALDAYEKVGKEL 382 (385)
T ss_pred CcEEcccCCCCC----------------CCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHHh
Confidence 787754322110 1223689999999999999999999999988654
No 134
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.95 E-value=7.6e-26 Score=222.39 Aligned_cols=313 Identities=19% Similarity=0.170 Sum_probs=215.1
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC
Q 040741 101 VAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA 180 (457)
Q Consensus 101 ~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~ 180 (457)
+...++++.+++++|.+ ++++++|||+|+++++.++.. ++|++|+++.++|.++..++... |+++++++++.
T Consensus 18 ~~~~~~~~~la~~~~~~--~~~~~~sgt~al~~~l~~l~~---~~gd~vl~~~~~~~~~~~~~~~~---g~~~~~~~~~~ 89 (352)
T cd00616 18 PKVREFEKAFAEYLGVK--YAVAVSSGTAALHLALRALGI---GPGDEVIVPSFTFVATANAILLL---GATPVFVDIDP 89 (352)
T ss_pred HHHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHcCC---CCCCEEEeCCcchHHHHHHHHHc---CCeEEEEecCC
Confidence 57889999999999974 589999999999999998842 78999999999999998877655 99999999986
Q ss_pred -CCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCC-CCcccEEEeccc-
Q 040741 181 -DGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVE-KWNVSLMSLSGH- 257 (457)
Q Consensus 181 -~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~-~~~~Di~~~s~~- 257 (457)
++.+|++++++++++++++|++++ ++|...|+++|.++|+++|+++|+|++|++|....+.. ....|+.++|++
T Consensus 90 ~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~ 166 (352)
T cd00616 90 DTYNIDPELIEAAITPRTKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTFGDAGAFSFHP 166 (352)
T ss_pred CcCCcCHHHHHHhcCcCCeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccCcceeEEcCCC
Confidence 688999999999999999998865 58999999999999999999999999999887643210 112477777765
Q ss_pred -cccCCCCceEEEEec-CCCccccccccCCccccc--cccCCCCh-hHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHH
Q 040741 258 -KIYGPKGVGALYMRR-RPRIRVEPLINGGGQERG--IRSGTLPT-PLIVGFGSACEI-AKKEMDYDHKRITALHDRLLN 331 (457)
Q Consensus 258 -K~~g~~G~G~l~~~~-~~~~~~~~~~~~~~~~~~--~~~~t~~~-~~~~al~~al~~-~~~~~~~~~~~~~~~~~~l~~ 331 (457)
|+++.+..|+++.++ +..+++.+...++..... +...+... ..+..+.+++.. ..+.+++..++.+++++++++
T Consensus 167 ~K~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~~~ 246 (352)
T cd00616 167 TKNLTTGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKLDEIIARRREIAERYKE 246 (352)
T ss_pred CCCCcccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 977533347777764 444444443322211100 00001000 001111112211 123467888888999999999
Q ss_pred HHhhcCCCeEEeCCCCC--cccceEEEEEc---cccchHHHhcc--cCeEecccCccCCCCCChhHHH----H--HcCCC
Q 040741 332 GIKEKLDGVVVNGSMER--RYIGNLNLSFA---YVEGESLLMGL--KEVAVSSGSACTSASLEPSYVL----R--ALGVD 398 (457)
Q Consensus 332 ~l~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l----~--~~g~~ 398 (457)
.|.+ ++++.++.++.. ..+..+.+.++ +.+..++...| +||. .+..|.+....+.+.. . .+...
T Consensus 247 ~L~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~--~~~~~~~~~~~~~~~~~~~~~~~~~~~a 323 (352)
T cd00616 247 LLAD-LPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIE--TRVHYPPLHHQPPYKKLLGYPPGDLPNA 323 (352)
T ss_pred HhcC-CCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCC--eeeecCccccCHhhhhccCCCcCCChHH
Confidence 9999 899988765432 23445555665 45667888877 4553 3455554333321110 0 00001
Q ss_pred ccCCCCeEEEecCCCCCHHHHHHHHHHHH
Q 040741 399 EDMAHTSIRFGIGRFTTEAEVDRAIELTV 427 (457)
Q Consensus 399 ~~~~~~~iRi~~~~~~t~edid~~~~~l~ 427 (457)
.....+.||+++..++|++||++++++|+
T Consensus 324 ~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 324 EDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred HHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 11234799999999999999999999874
No 135
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.95 E-value=1.4e-25 Score=221.74 Aligned_cols=334 Identities=19% Similarity=0.182 Sum_probs=231.2
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHh-hhhhcCCC
Q 040741 68 PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGV-MHFYKDKK 146 (457)
Q Consensus 68 ~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~-~~~~~~~g 146 (457)
.++++..+++.+.+.+.+-. . .+...++|+.+++++|.+ ++++++|||+|+.+++.++ . ++|
T Consensus 11 ~~~~~e~~~~~~~l~~~~~~-------~----g~~~~~le~~la~~~g~~--~~v~~~sgt~al~lal~al~~----~~G 73 (379)
T PRK11658 11 AMGDEELAAVKEVLRSGWIT-------T----GPKNQALEQAFCQLTGNQ--HAIAVSSATAGMHITLMALGI----GPG 73 (379)
T ss_pred CCCHHHHHHHHHHHHcCCcc-------C----CHhHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHcCC----CCC
Confidence 35677788888887642211 1 156889999999999986 4899999999999999988 5 799
Q ss_pred CEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCC-CCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhc
Q 040741 147 RHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGAD-GIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEF 225 (457)
Q Consensus 147 ~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~-~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~ 225 (457)
|+||++.++|.++..++... |++++.++++.+ +.+|+++++++++++|++|+..+ ++|...|+++|.++|+++
T Consensus 74 d~Viv~~~~~~~~~~~~~~~---G~~~v~vd~~~~~~~~d~~~l~~~i~~~tkav~~~~---~~G~~~d~~~i~~~a~~~ 147 (379)
T PRK11658 74 DEVITPSLTWVSTLNMIVLL---GATPVMVDVDRDTLMVTPEAIEAAITPRTKAIIPVH---YAGAPADLDAIRAIGERY 147 (379)
T ss_pred CEEEECCCcHHHHHHHHHHc---CCEEEEEecCCCcCCcCHHHHHHhcccCCeEEEEeC---CCCCcCCHHHHHHHHHHc
Confidence 99999999999998777655 999999999854 46899999999999999887444 589999999999999999
Q ss_pred CCcEEEehhhhcCCCcc--cCCCCcccEEEecccc-ccCCCCceEEEEe-cCCCccccccccCCcccc------------
Q 040741 226 KIPFHTDAAQALGKIPV--DVEKWNVSLMSLSGHK-IYGPKGVGALYMR-RRPRIRVEPLINGGGQER------------ 289 (457)
Q Consensus 226 ~v~li~D~a~~~g~~~~--~~~~~~~Di~~~s~~K-~~g~~G~G~l~~~-~~~~~~~~~~~~~~~~~~------------ 289 (457)
|+++|+|++|++|.... .+...+.++++++.+| +.++.| |+++.+ ++..++++....++....
T Consensus 148 gi~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~~K~l~~g~G-G~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 226 (379)
T PRK11658 148 GIPVIEDAAHAVGTYYKGRHIGARGTAIFSFHAIKNITCAEG-GLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQ 226 (379)
T ss_pred CCeEEEECCCccCCeECCeecCCCCCEEEeCCCCCcCcccCc-eEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCc
Confidence 99999999999887643 2445566888888889 444554 777765 345555554433221100
Q ss_pred --ccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCC--cccceEEEEEc----c
Q 040741 290 --GIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMER--RYIGNLNLSFA----Y 360 (457)
Q Consensus 290 --~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~----~ 360 (457)
.+..|+.. -+..+.+|+.+.+. .++++.++.+++++++.+.|.+ ++...+..+... .......+.+. +
T Consensus 227 ~~~~~~G~n~--~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (379)
T PRK11658 227 AEVLTPGYKY--NLADINAAIALVQLAKLEALNARRREIAARYLQALAD-LPFQPLSLPAWPHQHAWHLFIIRVDEERCG 303 (379)
T ss_pred ceeecccccc--CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCccCcCCCCCCceeEEEEEEEECCcccc
Confidence 00112110 12344555555543 5889999999999999999988 764433332211 11223333442 2
Q ss_pred ccchHHHhcc--cCeEecccCccCCCCCChhHHHH----HcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHH
Q 040741 361 VEGESLLMGL--KEVAVSSGSACTSASLEPSYVLR----ALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 361 ~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~----~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~ 430 (457)
.+.+++...| +||.+ +..|.+....|-|.-. .+...+....+.|.+.+....++||++++++.|++++
T Consensus 304 ~~r~~~~~~L~~~gI~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 304 ISRDALMEALKERGIGT--GLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred CCHHHHHHHHHHCCCCC--cccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 3456777777 46553 3444444444432110 1112223346788899898899999999999999875
No 136
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.95 E-value=4.1e-26 Score=211.53 Aligned_cols=322 Identities=20% Similarity=0.240 Sum_probs=221.4
Q ss_pred EEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHh
Q 040741 59 LYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGV 138 (457)
Q Consensus 59 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~ 138 (457)
++|..+..+...|+++++|.+.-.. ....|+.++...++++.+++++|. ..++|+++||+||.+++.++
T Consensus 2 ~~f~SDn~~g~~~~m~eam~~a~~~---------~~~~YG~D~~~~~~e~~~ae~~g~--~a~~Fv~sGT~aN~lal~~~ 70 (342)
T COG2008 2 IDFRSDNVAGPTPEMREALAAANAV---------GDDVYGEDPTTNALEQRIAELFGK--EAALFVPSGTQANQLALAAH 70 (342)
T ss_pred CccccCccCCCCHHHHHHHHhcccc---------CCCCCCCCHHHHHHHHHHHHHhCC--ceEEEecCccHHHHHHHHHh
Confidence 5677777778889999999987531 122445558999999999999998 44999999999999999999
Q ss_pred hhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCC------ceEEEEeccccccccc
Q 040741 139 MHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPD------TGLISVMAVNNEIGVI 212 (457)
Q Consensus 139 ~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~------t~li~i~~~~~~~G~~ 212 (457)
+ +|+..||+.+..|....++.-.....+.....+....+|.+++++|++.|+++ +.+++.++.++..|.+
T Consensus 71 ~----~~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtV 146 (342)
T COG2008 71 C----QPGESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTV 146 (342)
T ss_pred c----CCCCeEEEeccccceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCcee
Confidence 9 89999999999999998864433233444545554578999999999988642 5677777777788999
Q ss_pred cC---hHHHHHHHHhcCCcEEEehhhhcCC---CcccCCC--CcccEEEeccccccCCCCceEEEEecCCCcccccc--c
Q 040741 213 QP---MEEIGQICKEFKIPFHTDAAQALGK---IPVDVEK--WNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPL--I 282 (457)
Q Consensus 213 ~~---l~~i~~l~~~~~v~li~D~a~~~g~---~~~~~~~--~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~--~ 282 (457)
+| |++|.++||++|+.||+|+|.-+.+ ...+... .++|+++++++|.+|.++..+++++++..++.... +
T Consensus 147 y~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~~~~~~a~~~rK~ 226 (342)
T COG2008 147 YPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNRDFAKRARRWRKR 226 (342)
T ss_pred cCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcceeeeEEEcCHHHHHHHHHHHHH
Confidence 99 4567788999999999999975322 1122222 37999999999977766546777776665554322 3
Q ss_pred cCCccccccccCCCChhHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccc
Q 040741 283 NGGGQERGIRSGTLPTPLIVGFGSACEIAKKE-MDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYV 361 (457)
Q Consensus 283 ~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (457)
.|++. .-..+.++ ..+.++++. +.....+.++++++|.+.|.+ .+|+.+..+++ .+++++.++..
T Consensus 227 ~Ggl~---------~k~r~laA-~~~~~l~~~~~~~~~~Han~mA~~La~~~~~-~~G~~~~~~~~---tN~vf~~l~~~ 292 (342)
T COG2008 227 AGGLM---------RKARFLAA-QGLYALEDDVWRLAADHANAMAARLAEGLEA-KPGVKLAFPVE---TNMVFVRLPES 292 (342)
T ss_pred hcccH---------hhhhHHHH-HHHHHHhccHHHHHHHHHHHHHHHHHHhhhh-cCCceeccCCc---ccEEEEECChH
Confidence 33322 11112222 123334444 333444455669999999997 78999987533 56666666532
Q ss_pred cchHHHhcccCeEecccCccCCCCCChhHHHHHcCCCccCCC-CeEEEecCCCCCHHHHHHHHHHHHHHH
Q 040741 362 EGESLLMGLKEVAVSSGSACTSASLEPSYVLRALGVDEDMAH-TSIRFGIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 362 ~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~-~~iRi~~~~~~t~edid~~~~~l~~~~ 430 (457)
..+.+. ..+.....|..- ..+ ..+||.+++.+++||||.++..++.++
T Consensus 293 ~i~~l~--~~~~~~~~~~~~-------------------~~~~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 293 AIEALR--LAGALFYRGVLI-------------------GAHGEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred HHHHHH--hhchhheeeeec-------------------cCCCceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 111111 122222111100 011 379999999999999999999988764
No 137
>PRK09148 aminotransferase; Validated
Probab=99.95 E-value=2.2e-25 Score=222.56 Aligned_cols=335 Identities=15% Similarity=0.101 Sum_probs=226.5
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh----C--CCCC-cEEEeCCh
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI----G--ASPK-EIIFTSGA 127 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~----g--~~~~-~i~~t~g~ 127 (457)
.+.+.|+.+.+. ++++.+.+++.+.+... . ...|+ ......++++.+++++ | ++++ ++++|+|+
T Consensus 30 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~----~--~~~Y~--~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~ 101 (405)
T PRK09148 30 ADIIDLGMGNPDLPTPQHIVDKLCETAQDP----R--THRYS--ASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGS 101 (405)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHcCc----c--cCCCC--CCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCCh
Confidence 455777776665 45788888887765321 1 01111 1123445666666655 5 4566 79999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCC--CCCHHHHHHhcCCCceEEEEecc
Q 040741 128 TESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADG--IVNLDELRAAIRPDTGLISVMAV 205 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~--~~d~~~le~~i~~~t~li~i~~~ 205 (457)
++++.+++.+++ ++||.|++..++|+.+...+... |.+++.++.+.++ ..+++++.+...++++++++++|
T Consensus 102 ~~al~~~~~~l~----~~gd~Vl~~~P~y~~~~~~~~~~---g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~P 174 (405)
T PRK09148 102 KEGFANMAQAIT----APGDVILCPNPSYPIHAFGFIMA---GGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYP 174 (405)
T ss_pred HHHHHHHHHHhc----CCCCEEEEcCCCCcccHHHHHhc---CCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeCC
Confidence 999999999998 89999999999999988777665 9999999986443 23444444444578899999999
Q ss_pred ccccccccCh---HHHHHHHHhcCCcEEEehhhhcCC---Ccc-c---CCC-CcccEEEeccccccCCCC--ceEEEEec
Q 040741 206 NNEIGVIQPM---EEIGQICKEFKIPFHTDAAQALGK---IPV-D---VEK-WNVSLMSLSGHKIYGPKG--VGALYMRR 272 (457)
Q Consensus 206 ~~~~G~~~~l---~~i~~l~~~~~v~li~D~a~~~g~---~~~-~---~~~-~~~Di~~~s~~K~~g~~G--~G~l~~~~ 272 (457)
+||||.+.+. ++|.++|++|+++|++|++|+... .+. . +.. .+..+++.|++|.+|.+| +||+++++
T Consensus 175 ~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~ 254 (405)
T PRK09148 175 SNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNE 254 (405)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCCH
Confidence 9999999995 678889999999999999997321 111 1 111 133467899999888666 99999887
Q ss_pred CCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccc
Q 040741 273 RPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIG 352 (457)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 352 (457)
+.++++...... ...+.+.+...++..+++...+.+++.+++++++++++.+.|++ . ++.+..+ .. +.
T Consensus 255 ~~i~~l~~~~~~-------~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~-~-~~~~~~p-~~--g~ 322 (405)
T PRK09148 255 RLIAALTRVKSY-------LDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGR-A-GWDIPPP-AA--SM 322 (405)
T ss_pred HHHHHHHHHHHH-------hccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH-c-CCccCCC-Ce--eE
Confidence 766655443211 11133344444444444322334677888889999999999988 4 5544322 11 33
Q ss_pred eEEEEEccc----cchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHH
Q 040741 353 NLNLSFAYV----EGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIEL 425 (457)
Q Consensus 353 ~~~~~~~~~----~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~ 425 (457)
++.+.++.. +..++...+ +||.+.+|..+.. ...+++||+++ .+.++++.++++
T Consensus 323 f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~-----------------~~~~~~Ri~~~--~~~~~l~~al~~ 383 (405)
T PRK09148 323 FAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGE-----------------HGDGYVRIALV--ENEQRIRQAARN 383 (405)
T ss_pred EEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCC-----------------CCCCeEEEEec--CCHHHHHHHHHH
Confidence 444444421 234555543 5999999864321 11379999997 468999999999
Q ss_pred HHHHHHHHHhc
Q 040741 426 TVKQVEKLREM 436 (457)
Q Consensus 426 l~~~~~~~~~~ 436 (457)
|.++++++.+.
T Consensus 384 l~~~l~~~~~~ 394 (405)
T PRK09148 384 IKRFLSSADET 394 (405)
T ss_pred HHHHHHHHHHH
Confidence 99999877653
No 138
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.95 E-value=1e-25 Score=226.22 Aligned_cols=342 Identities=18% Similarity=0.211 Sum_probs=230.9
Q ss_pred CCcEEecCCCCCCCCHHHHHHHHHHHhhcc--CCCCCCccchhhhHHHHHHH-HHHHHHHHhCCCCCcEEEeCChHHHHH
Q 040741 56 GRPLYLDMQATTPVDPRVLDAMLPFYLSRY--GNPHSRTHLFGWESEVAVET-ARSQIADLIGASPKEIIFTSGATESNN 132 (457)
Q Consensus 56 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~p~~~~~~~~~~~~~~~~~-~~~~la~~~g~~~~~i~~t~g~T~a~~ 132 (457)
.+.+.|.. +.+++++++++++..++...+ +++.+ .+..+....+..++ +++.+++++|+++.+++++ +||.|+.
T Consensus 25 ~~~~~l~~-~~n~~~~~v~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i~~~-sgt~al~ 101 (416)
T PRK00011 25 EEHIELIA-SENFVSPAVMEAQGSVLTNKYAEGYPGK-RYYGGCEYVDVVEQLAIDRAKELFGAEYANVQPH-SGSQANA 101 (416)
T ss_pred hcCeeeec-ccCcCCHHHHHHHhchhhcccccCCCCc-cccccchHHHHHHHHHHHHHHHHhCCCceeeecC-CchHHHH
Confidence 34455554 455689999999988875544 34443 23334334445554 6779999999987656554 5788999
Q ss_pred HHHHHhhhhhcCCCCEEEEcCCCCcchHHHHH--HHHhcCcEEEEEeCC-CCCCCCHHHHHHhcCC-CceEEEEeccccc
Q 040741 133 VSIKGVMHFYKDKKRHVITTQTEHKCVLDSCR--HLQQEGFEITYLPVG-ADGIVNLDELRAAIRP-DTGLISVMAVNNE 208 (457)
Q Consensus 133 ~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~--~~~~~G~~v~~v~~~-~~~~~d~~~le~~i~~-~t~li~i~~~~~~ 208 (457)
+++.++. ++||+|+++.++|.++..... .+...|++++.++++ .++.+|++++++++++ ++++|++++. .
T Consensus 102 ~~l~~l~----~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~k~v~~~~~--~ 175 (416)
T PRK00011 102 AVYFALL----KPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGAS--A 175 (416)
T ss_pred HHHHHhc----CCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhcCCCEEEECCC--c
Confidence 9999987 899999999999986543211 122346788888887 4578999999999975 7888887643 3
Q ss_pred cccccChHHHHHHHHhcCCcEEEehhhhcCCC-----cccCCCCcccEEEecccccc-CCCCceEEEEe-cCCCcccccc
Q 040741 209 IGVIQPMEEIGQICKEFKIPFHTDAAQALGKI-----PVDVEKWNVSLMSLSGHKIY-GPKGVGALYMR-RRPRIRVEPL 281 (457)
Q Consensus 209 ~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~-----~~~~~~~~~Di~~~s~~K~~-g~~G~G~l~~~-~~~~~~~~~~ 281 (457)
+|...|+++|.++|+++|+++|+|++|+.|.. +..+. ++|++++|+||++ |+.| |+++.+ ++..+++...
T Consensus 176 ~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~--~~di~~~S~~K~l~g~~g-g~i~~~~~~~~~~l~~~ 252 (416)
T PRK00011 176 YSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP--HADVVTTTTHKTLRGPRG-GLILTNDEELAKKINSA 252 (416)
T ss_pred CCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC--CCcEEEecCCcCCCCCCc-eEEEeCCHHHHHHHHHH
Confidence 57778999999999999999999999987654 22333 6799999999954 6775 788875 3554444332
Q ss_pred ccCCccccccccCCCChhHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcc
Q 040741 282 INGGGQERGIRSGTLPTPLIVGFGSACEIAK-KEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAY 360 (457)
Q Consensus 282 ~~~~~~~~~~~~~t~~~~~~~al~~al~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (457)
...+ ..+++....++++..++.... +++++..++.+++++++++.|.+ + ++.+... ....+.+.+.+..
T Consensus 253 ~~~~------~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~--~~~~~~~~i~~~~ 322 (416)
T PRK00011 253 VFPG------IQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAE-R-GFRVVSG--GTDNHLVLVDLRS 322 (416)
T ss_pred hCcc------ccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-C-CCeeeec--CCCCeEEEEeCcc
Confidence 2211 123444555566555554433 35788899999999999999998 4 7776531 1123444455532
Q ss_pred c--cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCC----CCCHHHHHHHHHHHHHHHHH
Q 040741 361 V--EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGR----FTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 361 ~--~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~----~~t~edid~~~~~l~~~~~~ 432 (457)
. +...+...| +||.+..+..... . .+......+|++... .++.+|+++++++|+++++.
T Consensus 323 ~~~~~~~~~~~L~~~GI~v~~~~~p~~--~-----------~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 323 KGLTGKEAEAALEEANITVNKNAVPFD--P-----------RSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred cCCCHHHHHHHHHHcCcEEccCcCCCC--C-----------CCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 2 345566666 5888764431110 0 011122568986533 45799999999999998775
No 139
>PLN02263 serine decarboxylase
Probab=99.95 E-value=1.3e-24 Score=214.12 Aligned_cols=333 Identities=14% Similarity=0.114 Sum_probs=240.6
Q ss_pred CCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCC--cEEEeCChHHHHHH
Q 040741 56 GRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPK--EIIFTSGATESNNV 133 (457)
Q Consensus 56 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~--~i~~t~g~T~a~~~ 133 (457)
+...+|+++.+.-.+...+.-+..+..+..|+|... ..|+..+.+.-.++.+++++++|.+++ ..++|+|||+||..
T Consensus 89 ~~~~~~gYp~n~~~d~s~l~~~l~~~~nN~Gdp~~~-s~~~~~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~ 167 (470)
T PLN02263 89 RTKHHLGYPYNLDFDYGALGQLQHFSINNLGDPFIE-SNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLH 167 (470)
T ss_pred cccceeCCCCcccCChhhHHHHHHhhccCCCCcccc-CCcchhHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHH
Confidence 445689887777776667777777776667776652 223335667888899999999999764 38999999999999
Q ss_pred HHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCC---ceEEEEeccccccc
Q 040741 134 SIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPD---TGLISVMAVNNEIG 210 (457)
Q Consensus 134 al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~---t~li~i~~~~~~~G 210 (457)
++.+.+..+ ++..++++...|.|+.++++++ |++++.||.+.++.+|+++|+++|.++ +.+|+.+...+++|
T Consensus 168 Al~aARe~~--~~~vvy~S~~aH~Sv~KAa~ll---gi~~~~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~G 242 (470)
T PLN02263 168 GILVGREVF--PDGILYASRESHYSVFKAARMY---RMECVKVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKG 242 (470)
T ss_pred HHHHHHhhc--CCcEEEEcCCccHHHHHHHHhc---CCcceEeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCc
Confidence 999988642 3457889999999999999998 999999999999999999999999754 46777888999999
Q ss_pred cccChHHHHHHHHhcCC-----cEEEehhhhcCCCc-------ccCCCCcccEEEeccccc-cCCCCceEEEEecCCCcc
Q 040741 211 VIQPMEEIGQICKEFKI-----PFHTDAAQALGKIP-------VDVEKWNVSLMSLSGHKI-YGPKGVGALYMRRRPRIR 277 (457)
Q Consensus 211 ~~~~l~~i~~l~~~~~v-----~li~D~a~~~g~~~-------~~~~~~~~Di~~~s~~K~-~g~~G~G~l~~~~~~~~~ 277 (457)
.+.|+++|.++|+++|+ ++|+|+|++....| +++.. .+|.+++++||+ +.|.++|+++++++....
T Consensus 243 AiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~~-~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~ 321 (470)
T PLN02263 243 AVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINV 321 (470)
T ss_pred CCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCCCc-CccEEEECCccccCCCcCEEEEEEehhhHhh
Confidence 99999999999999997 99999999765443 23322 389999999995 558899999999764422
Q ss_pred cc---ccccCCccccccccCCCChhHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccce
Q 040741 278 VE---PLINGGGQERGIRSGTLPTPLIVGFGSACEI-AKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGN 353 (457)
Q Consensus 278 ~~---~~~~~~~~~~~~~~~t~~~~~~~al~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 353 (457)
+. .++.... . --.|+-+....+.+-.+++. ..+++.++.++..++++++.+.|++ . ++.+..++. .+.
T Consensus 322 ~~~~~~Yl~~~d--~-ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~-~-g~~~~~~p~---s~~ 393 (470)
T PLN02263 322 LSSNVEYLASRD--A-TIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLRE-A-GISAMLNEL---SST 393 (470)
T ss_pred hccChHhhCCCC--C-CcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHh-C-CCeEEeCCC---ceE
Confidence 21 1111110 0 01122222222333334443 3457999999999999999999999 5 665555432 233
Q ss_pred EEEEEccccchHHHhcccCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 354 LNLSFAYVEGESLLMGLKEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 354 ~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
+.|....... ..+|-.+.. ..+.+++++...++++.+|.+++.|++..+.
T Consensus 394 --V~f~~p~~~~---~~~gW~L~~------------------------~~~~~Hivvmphv~~~~id~fi~DL~~~~~~ 443 (470)
T PLN02263 394 --VVFERPKDEE---FVRRWQLAC------------------------QGNIAHVVVMPSVTIEKLDYFLKELVEKRST 443 (470)
T ss_pred --EEEecCchHH---hhcceEEcc------------------------CCCcEEEEEcCCCCHHHHHHHHHHHHHHHhh
Confidence 3343222111 113433321 0157999999988899999999999988764
No 140
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.95 E-value=1.9e-25 Score=222.63 Aligned_cols=329 Identities=14% Similarity=0.130 Sum_probs=224.6
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh--------CCCCC-cEEEeC
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI--------GASPK-EIIFTS 125 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~--------g~~~~-~i~~t~ 125 (457)
.+.+.|+.+.+. .+++.+.+++.+.+.....++.. ....++++.+++++ |++++ ++++|+
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~~----------~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~ 97 (393)
T TIGR03538 28 KPPIALSIGEPKHPTPAFVLEALRENLHGLSTYPTT----------KGLPELRQAIARWLERRFDLPTGVDPERHVLPVN 97 (393)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHhhccCCCCCC----------CCCHHHHHHHHHHHHHhhCCcccCCCCceEEECC
Confidence 456777776666 56788899988876433222211 12445666666665 35664 799999
Q ss_pred ChHHHHHHHHHHhhhhhcCCCCE--EEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCC--CCCCHHHHHHhcCCCceEEE
Q 040741 126 GATESNNVSIKGVMHFYKDKKRH--VITTQTEHKCVLDSCRHLQQEGFEITYLPVGAD--GIVNLDELRAAIRPDTGLIS 201 (457)
Q Consensus 126 g~T~a~~~al~~~~~~~~~~g~~--vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~--~~~d~~~le~~i~~~t~li~ 201 (457)
|+++++.+++.+++ ++|+. |+++.+.|+.+...++.. |.+++.++++.+ ..+|++++++++.+++++|+
T Consensus 98 Ga~~al~~~~~~l~----~~gd~~~vlv~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~ 170 (393)
T TIGR03538 98 GTREALFAFAQAVI----NPGQAPLVVMPNPFYQIYEGAALLA---GAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLF 170 (393)
T ss_pred CcHHHHHHHHHHHc----CCCCcceEEecCCCCcchHHHHHhc---CCeEEEeeccccCCCCCCHHHHHHHHhhcceEEE
Confidence 99999999999988 78886 999999999888776655 999999998633 46799999999888899999
Q ss_pred EeccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCCC-----ccc----CC-----CCcccEEEeccccccCCCC
Q 040741 202 VMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKI-----PVD----VE-----KWNVSLMSLSGHKIYGPKG 264 (457)
Q Consensus 202 i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~-----~~~----~~-----~~~~Di~~~s~~K~~g~~G 264 (457)
+++++||||.+.+ +++|+++|++|+++|++|+++..... +.. .. ....-+++.|++|.|+.+|
T Consensus 171 l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~G 250 (393)
T TIGR03538 171 VCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPG 250 (393)
T ss_pred EeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcc
Confidence 9999999999998 77888999999999999999973211 111 00 1123478899999776555
Q ss_pred --ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEE
Q 040741 265 --VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVV 342 (457)
Q Consensus 265 --~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 342 (457)
+|+++.+++.++++..... ....+.+.....++..++.. .+.+++..+++++.++.+.+.|.+ . +.+
T Consensus 251 lRvG~~i~~~~l~~~~~~~~~-------~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~L~~-~--~~~ 319 (393)
T TIGR03538 251 LRSGFVAGDAEILKAFLRYRT-------YHGCAMPIPTQLASIAAWND-EQHVRENRALYREKFAAVLEILGQ-V--LDL 319 (393)
T ss_pred cceEEEecCHHHHHHHHHHHH-------hhccCcCHHHHHHHHHHhcC-hHHHHHHHHHHHHHHHHHHHHHHh-h--Ccc
Confidence 9999988766555543221 01113343444433334321 234677788888888889888887 3 222
Q ss_pred eCCCCCcccceEEEEEccccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHH
Q 040741 343 NGSMERRYIGNLNLSFAYVEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEV 419 (457)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edi 419 (457)
.. +.. +.++.+.++ .+..++...+ +||.+.+|..+..... ......+++||+++. +++++
T Consensus 320 ~~-p~g--g~f~~~~~~-~~~~~~~~~l~~~~gV~v~pg~~f~~~~~-----------~~~~~~~~~Ris~~~--~~~~l 382 (393)
T TIGR03538 320 EL-PDA--GFYLWPKVP-GDDEAFARALYEEENVTVLPGRFLAREAE-----------GVNPGEGRVRIALVA--PLEEC 382 (393)
T ss_pred cC-CCe--eEEEEEECC-CCHHHHHHHHHHHCCEEEeCCcccccccc-----------CCCCCCCEEEEEecC--CHHHH
Confidence 22 111 334444444 3456666554 5999999986532100 001223799999986 57899
Q ss_pred HHHHHHHHHH
Q 040741 420 DRAIELTVKQ 429 (457)
Q Consensus 420 d~~~~~l~~~ 429 (457)
+.++++|.+.
T Consensus 383 ~~~l~~l~~~ 392 (393)
T TIGR03538 383 VEAAERIRSF 392 (393)
T ss_pred HHHHHHHHHh
Confidence 9999888764
No 141
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.95 E-value=1e-25 Score=227.12 Aligned_cols=290 Identities=14% Similarity=0.149 Sum_probs=210.4
Q ss_pred HHHHHHHHHHHhCC---CCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC
Q 040741 103 VETARSQIADLIGA---SPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG 179 (457)
Q Consensus 103 ~~~~~~~la~~~g~---~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~ 179 (457)
..++++.++++++. ++++|++|+|+++++.+++.+++ ++||.|++..+.|+.+...++.. |++++.++.+
T Consensus 123 ~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~----~pgd~Vlv~~P~y~~~~~~~~~~---g~~~~~v~~~ 195 (431)
T PRK15481 123 SPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHL----LPGDSVAVEDPCFLSSINMLRYA---GFSASPVSVD 195 (431)
T ss_pred CHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhC----CCCCEEEEeCCCcHHHHHHHHHc---CCeEEeeccC
Confidence 45677788887762 24589999999999999999998 89999999999999998887766 9999999987
Q ss_pred CCCCCCHHHHHHhcCCCceEEEEe-ccccccccccChH---HHHHHHHhc-CCcEEEehhhhcCCC-c-cc-CC-CCccc
Q 040741 180 ADGIVNLDELRAAIRPDTGLISVM-AVNNEIGVIQPME---EIGQICKEF-KIPFHTDAAQALGKI-P-VD-VE-KWNVS 250 (457)
Q Consensus 180 ~~~~~d~~~le~~i~~~t~li~i~-~~~~~~G~~~~l~---~i~~l~~~~-~v~li~D~a~~~g~~-~-~~-~~-~~~~D 250 (457)
.++ +|++++++++++++++++++ ++|||||.+.+.+ +|.++|+++ +++|++|++++--.. + .. +. ..+..
T Consensus 196 ~~g-~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~v 274 (431)
T PRK15481 196 AEG-MQPEKLERALAQGARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRW 274 (431)
T ss_pred CCC-CCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCE
Confidence 655 89999999998888887776 9999999999965 899999999 999999999873211 0 11 11 12345
Q ss_pred EEEeccccccCCCC--ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHH--HHhhHHHHHHHHHHH
Q 040741 251 LMSLSGHKIYGPKG--VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIA--KKEMDYDHKRITALH 326 (457)
Q Consensus 251 i~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~--~~~~~~~~~~~~~~~ 326 (457)
+++.||+|.|| +| +||++.+++..+++....... ....+.....++..+++.. .+.+.+..+.+++.+
T Consensus 275 i~~~SfSK~~~-~GlRiG~~i~~~~~~~~~~~~~~~~-------~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r 346 (431)
T PRK15481 275 ALIRSVSKALG-PDLRLAFVASDSATSARLRLRLNSG-------TQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRR 346 (431)
T ss_pred EEEeeeccccC-CCceeEEEeCCHHHHHHHHHHHhcc-------ccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 88899999888 45 999998876665554322111 1134555555555555432 223677888899999
Q ss_pred HHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCC
Q 040741 327 DRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHT 404 (457)
Q Consensus 327 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~ 404 (457)
+.+.+.|.+ . ++.+..+ .. +.++.+.++. +..++...+ +||.+.+|..+.. . ...+
T Consensus 347 ~~~~~~L~~-~-~~~~~~p-~g--g~f~~~~l~~-~~~~~~~~l~~~gV~v~pg~~f~~--------------~--~~~~ 404 (431)
T PRK15481 347 QKLARALQQ-Y-GIAIPSP-GD--GLNLWLPLDT-DSQATALTLAKSGWLVREGEAFGV--------------S--APSH 404 (431)
T ss_pred HHHHHHHHH-c-CCccccC-CC--eEEEEEECCC-CHHHHHHHHHHCCcEEecCCcccc--------------C--CCCC
Confidence 999999988 4 5544222 11 3334444432 345565555 7999999875532 1 1126
Q ss_pred eEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 405 SIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 405 ~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
++||+++.. +.++++.++++|.++++
T Consensus 405 ~iRis~~~~-~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 405 GLRITLSTL-NDAEINRLAADLHQALN 430 (431)
T ss_pred eEEEEcCCC-ChHHHHHHHHHHHHHhc
Confidence 899999874 58999999999998875
No 142
>PRK03321 putative aminotransferase; Provisional
Probab=99.95 E-value=1.5e-25 Score=220.19 Aligned_cols=314 Identities=17% Similarity=0.149 Sum_probs=225.2
Q ss_pred CcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHH
Q 040741 57 RPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSI 135 (457)
Q Consensus 57 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al 135 (457)
+.+.|+.+.+. ++++.+.+++.+.......+|. ....++++.++++++++++++++++|+++++..++
T Consensus 23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~-----------~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~ 91 (352)
T PRK03321 23 GAIKLSSNETPFGPLPSVRAAIARAAAGVNRYPD-----------MGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLV 91 (352)
T ss_pred cceeccCCCCCCCCCHHHHHHHHHHHHhcCcCCC-----------CcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHH
Confidence 56888888777 4778999999988754322221 24678999999999998889999999999999988
Q ss_pred HHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccCh
Q 040741 136 KGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPM 215 (457)
Q Consensus 136 ~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l 215 (457)
..+. ++|++|+++.+.|..+...++.. |.+++.++.+.++.+|+++++++++++++++++++++||+|.+.|.
T Consensus 92 ~~~~----~~gd~Vli~~p~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~ 164 (352)
T PRK03321 92 QATA----GPGDEVIFAWRSFEAYPILVQVA---GATPVQVPLTPDHTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTP 164 (352)
T ss_pred HHhc----CCCCEEEeCCCCHHHHHHHHHHc---CCEEEEccCCCCCCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCH
Confidence 8877 89999999888877665554444 9999999988667889999999999899999999999999999999
Q ss_pred HHHHHHHHh--cCCcEEEehhhhcCCC----c--cc-CCCCcccEEEeccccccCCCC--ceEEEEecCCCccccccccC
Q 040741 216 EEIGQICKE--FKIPFHTDAAQALGKI----P--VD-VEKWNVSLMSLSGHKIYGPKG--VGALYMRRRPRIRVEPLING 284 (457)
Q Consensus 216 ~~i~~l~~~--~~v~li~D~a~~~g~~----~--~~-~~~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~ 284 (457)
+++.++|+. +++++++|+++..... + +. ....+.-+++.|++|.+|.+| +|+++++++.++.+.....
T Consensus 165 ~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~- 243 (352)
T PRK03321 165 AELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALRKVAV- 243 (352)
T ss_pred HHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHHHhcC-
Confidence 999999987 5999999999973211 1 11 111123467779999888666 8999998776666554321
Q ss_pred CccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccch
Q 040741 285 GGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGE 364 (457)
Q Consensus 285 ~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (457)
..+.+.....++.+++... +.+.+..++..+.++++.+.|.+ . ++.+.. +. +.++.+.+. .+..
T Consensus 244 --------~~~~s~~~q~~a~~~l~~~-~~~~~~~~~~~~~r~~~~~~L~~-~-~~~~~~-~~---g~~i~i~l~-~~~~ 307 (352)
T PRK03321 244 --------PFSVNSLAQAAAIASLAAE-DELLERVDAVVAERDRVRAALRA-A-GWTVPP-SQ---ANFVWLPLG-ERTA 307 (352)
T ss_pred --------CCCCCHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHH-C-CCccCC-CC---CCEEEEeCC-CCHH
Confidence 1244555555444555422 23344445555566778888887 4 554432 11 333444443 2345
Q ss_pred HHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 365 SLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 365 ~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
++...| +||.+.+ | ....|||+++ +.++.++++++++++++
T Consensus 308 ~~~~~l~~~gI~v~~---~--------------------~~~~iRi~~~---~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 308 DFAAAAAEAGVVVRP---F--------------------AGEGVRVTIG---APEENDAFLRAARAWRA 350 (352)
T ss_pred HHHHHHHHCCEEEEc---c--------------------CCCcEEEeeC---CHHHHHHHHHHHHHHhc
Confidence 566665 6887753 1 1146999986 58999999999998754
No 143
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.95 E-value=1.8e-25 Score=219.55 Aligned_cols=311 Identities=14% Similarity=0.108 Sum_probs=221.5
Q ss_pred chhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHH-HHhcCcE
Q 040741 94 LFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRH-LQQEGFE 172 (457)
Q Consensus 94 ~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~-~~~~G~~ 172 (457)
.|++...+....+++.+|++.|. +++++++||++|+.+++.++. ++||+|+++.+.|.+....+.. ....|++
T Consensus 46 ~Y~R~~npt~~~Le~~lA~leg~--e~ivvt~gg~~Ai~~~l~all----~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~ 119 (388)
T PRK08861 46 DYTRSGNPNRGLLEQTLSELESG--KGAVVTNCGTSALNLWVSALL----GPDDLIVAPHDCYGGTYRLFNTRANKGDFK 119 (388)
T ss_pred cccCCCCchHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHHc----CCCCEEEEcCCchHHHHHHHHHHHhcCCeE
Confidence 34555557888999999999996 459999999999999999987 8999999999999876665533 3445788
Q ss_pred EEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEE
Q 040741 173 ITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLM 252 (457)
Q Consensus 173 v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~ 252 (457)
+++++. .|+++++++++++|++|++++++||+|.+.|+++|.++|+++|+++++|++++.+.....+ +.++|++
T Consensus 120 v~~vd~-----~d~e~l~~~i~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~~pl-~~GaDiv 193 (388)
T PRK08861 120 VQFVDQ-----SDAAALDAALAKKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQKPL-ELGADFV 193 (388)
T ss_pred EEEECC-----CCHHHHHHhcCcCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccCCCc-ccCCCEE
Confidence 888863 3899999999999999999999999999999999999999999999999999876543222 4589999
Q ss_pred Eecccccc-CCCC--ceEEEEecC-CCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 040741 253 SLSGHKIY-GPKG--VGALYMRRR-PRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDR 328 (457)
Q Consensus 253 ~~s~~K~~-g~~G--~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~ 328 (457)
+.|+||++ |+.+ .|+++.+++ ..+++...... .....++....-+... .+.+.-++++..+++..
T Consensus 194 v~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~-------~G~~~~p~~a~l~~rg----l~Tl~lR~~~~~~~a~~ 262 (388)
T PRK08861 194 IHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNC-------IGATGTPFDSYMTLRG----IRTLGARMRVHEESAQQ 262 (388)
T ss_pred EeecceeccCCCcceeEEEEecHHHHHHHHHHHHhc-------cCCCCChHHHHHHHhc----CCCHHHHHHHHHHHHHH
Confidence 99999954 5544 577776543 22223222211 1123333333322211 22467788888999999
Q ss_pred HHHHHhhcCCCeE-EeCC--CC-----------CcccceEEEEEccc--cchHHHhccc--CeEecccCccC----CCCC
Q 040741 329 LLNGIKEKLDGVV-VNGS--ME-----------RRYIGNLNLSFAYV--EGESLLMGLK--EVAVSSGSACT----SASL 386 (457)
Q Consensus 329 l~~~l~~~~~~~~-~~~~--~~-----------~~~~~~~~~~~~~~--~~~~~~~~l~--~i~~~~g~~~~----~~~~ 386 (457)
+.+.|++ .|.+. |+-+ ++ ...++++.|.+.+- ....++..|+ .+++.-|...+ +..+
T Consensus 263 ~a~~L~~-~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~ 341 (388)
T PRK08861 263 ILAYLQT-QSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLKVFVKALALFSLAESLGGVESLICHPASM 341 (388)
T ss_pred HHHHHHh-CCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCHHHHHHHHhcCCcceEccCCCCCcceeeCCCcc
Confidence 9999998 78763 2221 11 23577888887631 1235556653 55566665433 2222
Q ss_pred Ch----hHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 040741 387 EP----SYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLREM 436 (457)
Q Consensus 387 ~~----~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~~ 436 (457)
.+ .-.....|+.+ +.|||+++. ||+|.+++.|+++++++.+.
T Consensus 342 ~h~~~~~~~~~~~gi~~----~liRlsvGl----E~~~dli~Dl~~al~~~~~~ 387 (388)
T PRK08861 342 THRAMGEEALAEAGVSQ----QLLRLSVGL----EDAQDLIADLDQAFAKAAEA 387 (388)
T ss_pred cccccCHHHHHhcCCCC----CeEEEEeCc----CCHHHHHHHHHHHHHHHHhc
Confidence 21 12234567665 899999997 88999999999999887654
No 144
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.95 E-value=3.9e-26 Score=225.94 Aligned_cols=310 Identities=14% Similarity=0.095 Sum_probs=220.7
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHH-HHHhcCc
Q 040741 93 HLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCR-HLQQEGF 171 (457)
Q Consensus 93 ~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~G~ 171 (457)
+.|++...+.+.++++.++++.|.+. ++++++|++|+.+++.+++ ++||+|+++.+.|.+....+. .+...|+
T Consensus 56 ~~y~r~~~p~~~~le~~lA~l~g~~~--~i~~ssG~~Ai~~~l~all----~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi 129 (398)
T PRK08249 56 HIYSRNTNPTVQAFEEKVRILEGAEA--ATAFSTGMAAISNTLYTFL----KPGDRVVSIKDTYGGTNKIFTEFLPRMGV 129 (398)
T ss_pred ccccCCCChHHHHHHHHHHHHhCCCe--EEEeCChHHHHHHHHHHhc----CCCCEEEEcCCchHHHHHHHHHHHhhCCe
Confidence 45566666899999999999999754 7888888999999999887 899999999999988766554 3455699
Q ss_pred EEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccE
Q 040741 172 EITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSL 251 (457)
Q Consensus 172 ~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di 251 (457)
++++++. .|+++++++|+++|++|++++++||+|.+.|+++|.++|+++|+++++|++++.+.... ....++|+
T Consensus 130 ~v~~vd~-----~d~e~l~~~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~-~l~~~~Di 203 (398)
T PRK08249 130 DVTLCET-----GDHEQIEAEIAKGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQN-PLALGADL 203 (398)
T ss_pred EEEEcCC-----CCHHHHHHhcCCCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCC-chhhCCCE
Confidence 9888764 48999999999999999999999999999999999999999999999999998654322 22357899
Q ss_pred EEeccccccCCCC---ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 040741 252 MSLSGHKIYGPKG---VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDR 328 (457)
Q Consensus 252 ~~~s~~K~~g~~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~ 328 (457)
++.|++|++|+.| .|+++.+++..+++...... .....+......+...++ .+..++++..+++..
T Consensus 204 vv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~-------~g~~~s~~~a~l~l~~l~----tL~~R~~~~~~na~~ 272 (398)
T PRK08249 204 VIHSATKFLSGHADALGGVVCGSKELMEQVYHYREI-------NGATMDPMSAYLILRGMK----TLKLRVRQQQESAMA 272 (398)
T ss_pred EeccCceecCCCCCceEEEEECCHHHHHHHHHHHHh-------cCCCCCHHHHHHHHhCcc----hHHHHHHHHHHHHHH
Confidence 9999999776533 47777665554544433221 112344333333323332 356667788889999
Q ss_pred HHHHHhhcCCCeEEe-CC--CC-----------CcccceEEEEEccc--cchHHHhccc--CeEecccCccC----CCCC
Q 040741 329 LLNGIKEKLDGVVVN-GS--ME-----------RRYIGNLNLSFAYV--EGESLLMGLK--EVAVSSGSACT----SASL 386 (457)
Q Consensus 329 l~~~l~~~~~~~~~~-~~--~~-----------~~~~~~~~~~~~~~--~~~~~~~~l~--~i~~~~g~~~~----~~~~ 386 (457)
+.+.|++ .|.+.-+ -+ +. ...++++.|.+.+- ....++..|+ .++++-|...+ +...
T Consensus 273 la~~L~~-~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~ 351 (398)
T PRK08249 273 LAKYLQT-HPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGMDTVKRLLPKLRYAHRAANLGAVETIYGPARTT 351 (398)
T ss_pred HHHHHHc-CCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCHHHHHHHHHhCCcceEccCCCCCCceeeCCccc
Confidence 9999988 7776422 11 11 13577787887531 1235666664 45555565433 2222
Q ss_pred Ch----hHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 387 EP----SYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 387 ~~----~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
.+ .-.....|+.+ +.|||+++. ||+|.+++.|+++++.+.
T Consensus 352 ~~~~~~~~~~~~~gi~~----~liR~svGl----E~~~dl~~dl~~al~~~~ 395 (398)
T PRK08249 352 SHVENTLEERAALGIPE----GLVRISVGI----EDTEDLIADLEQAFAHLE 395 (398)
T ss_pred ccccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHHHhh
Confidence 11 11233456654 899999996 789999999999988654
No 145
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.95 E-value=2.1e-25 Score=218.90 Aligned_cols=306 Identities=15% Similarity=0.102 Sum_probs=220.2
Q ss_pred chhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHH-HHHhcCcE
Q 040741 94 LFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCR-HLQQEGFE 172 (457)
Q Consensus 94 ~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~G~~ 172 (457)
.|++...+....+|+.++++.|.+ ++++++||++|+..++.++. ++||+|+++++.|++....+. .++..|++
T Consensus 43 ~Y~r~gnPt~~~lE~~lA~l~g~~--~~~~~~sG~~Ai~~al~all----~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~ 116 (377)
T TIGR01324 43 TYGRRGTLTHFALQDAMCELEGGA--GCYLYPSGLAAVTNSILAFV----KAGDHVLMVDSAYEPTRYFCDIVLKRMGVD 116 (377)
T ss_pred cccCCCCccHHHHHHHHHHHhCCC--cEEEECcHHHHHHHHHHHhc----CCCCEEEEcCCCcHHHHHHHHHHHHhcCcE
Confidence 344444567889999999999975 49999999999999999997 899999999999887765443 34556888
Q ss_pred EEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEE
Q 040741 173 ITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLM 252 (457)
Q Consensus 173 v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~ 252 (457)
+.+++.+ +.++++++++++|++|++++++|++|.+.|+++|+++|+++|+++++|++|+.|... ...++++|++
T Consensus 117 v~~~d~~-----~~e~l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~-~pl~~gaDiv 190 (377)
T TIGR01324 117 ITYYDPL-----IGEDIATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLF-KPLEHGVDIS 190 (377)
T ss_pred EEEECCC-----CHHHHHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcccccc-CccccCceEE
Confidence 8888643 338899999999999999999999999999999999999999999999999988663 3445789999
Q ss_pred EeccccccC-CCC--ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 040741 253 SLSGHKIYG-PKG--VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRL 329 (457)
Q Consensus 253 ~~s~~K~~g-~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l 329 (457)
+.|++|++| +.+ .|+++.+++..+++..... ....+.++.....+...++ .+..++++..+++..+
T Consensus 191 v~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~-------~~G~~l~p~~a~~~~rgl~----tl~~R~~~~~~~a~~l 259 (377)
T TIGR01324 191 IQAGTKYLVGHSDIMIGTVVANARTWDQLREHSY-------LMGQMVDADDAYTTLRGLR----TLGVRLKQHQESSLAI 259 (377)
T ss_pred EecCceeccCCCCceEEEEEeCHHHHHHHHHHHH-------HhCCCCCHHHHHHHHhhhh----hHHHHHHHHHHHHHHH
Confidence 999999654 433 5888887654444432211 1112445544443333332 4566788888888899
Q ss_pred HHHHhhcCCCe-EEeCCC-------------CCcccceEEEEEcccc---chHHHhcc--cCeEecccCccCCCC-----
Q 040741 330 LNGIKEKLDGV-VVNGSM-------------ERRYIGNLNLSFAYVE---GESLLMGL--KEVAVSSGSACTSAS----- 385 (457)
Q Consensus 330 ~~~l~~~~~~~-~~~~~~-------------~~~~~~~~~~~~~~~~---~~~~~~~l--~~i~~~~g~~~~~~~----- 385 (457)
.+.|++ .|.+ +++-+. ....++++.|.+++.+ ...++..| .+++++-|...+...
T Consensus 260 a~~L~~-~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~~~~~~~slG~~~sl~~~~~~~ 338 (377)
T TIGR01324 260 AKWLSE-QPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQLFGLGYSWGGYESLALCNQPE 338 (377)
T ss_pred HHHHHh-CCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEeccCCCccceeecCCCC
Confidence 999988 6766 333221 1134677778876422 34566666 367777776544321
Q ss_pred CChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 386 LEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 386 ~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
+.+ ......|+.+ +.|||+++. ||.|.+++.|+++++.
T Consensus 339 ~~~-~~~~~~~~~~----~liR~svGl----E~~~dl~~dl~~al~~ 376 (377)
T TIGR01324 339 LGH-RPNIKRNLEG----PLIRVHIGL----ENVDDLKADLKAGFEA 376 (377)
T ss_pred CCH-HHHHhccCCC----CEEEEEeCC----CCHHHHHHHHHHHHhc
Confidence 222 1223344433 799999997 7888888888888764
No 146
>PRK07777 aminotransferase; Validated
Probab=99.95 E-value=6.1e-25 Score=218.54 Aligned_cols=334 Identities=19% Similarity=0.162 Sum_probs=224.3
Q ss_pred CcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCC--CC-cEEEeCChHHHHH
Q 040741 57 RPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGAS--PK-EIIFTSGATESNN 132 (457)
Q Consensus 57 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~--~~-~i~~t~g~T~a~~ 132 (457)
+.+.|..+.+. +.++.+.+++.+.+.... . .|....+..+..+.+.+.+.+..|.+ ++ ++++|+|+|+|+.
T Consensus 25 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~---~--~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~ 99 (387)
T PRK07777 25 GAVNLGQGFPDEDGPPEMLEAAQEAIAGGV---N--QYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIA 99 (387)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhcCC---C--CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHH
Confidence 44666655544 345667777776654311 0 11111111223333333444445653 44 6999999999999
Q ss_pred HHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCC---CCCCHHHHHHhcCCCceEEEEecccccc
Q 040741 133 VSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGAD---GIVNLDELRAAIRPDTGLISVMAVNNEI 209 (457)
Q Consensus 133 ~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~---~~~d~~~le~~i~~~t~li~i~~~~~~~ 209 (457)
+++.++. ++||+|++..+.|+.+..++... |.+++.++.+++ +.+|++++++++++++++|++++++|||
T Consensus 100 ~~~~~~~----~~gd~vli~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPt 172 (387)
T PRK07777 100 AAVLGLV----EPGDEVLLIEPYYDSYAAVIAMA---GAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPT 172 (387)
T ss_pred HHHHHhc----CCCCEEEEeCCCchhhHHHHHHC---CCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCC
Confidence 9999887 89999999999998887766655 999998888643 4589999999999899999999999999
Q ss_pred ccccC---hHHHHHHHHhcCCcEEEehhhhcCC----C--ccc-CCC-CcccEEEeccccccCCCC--ceEEEEecCCCc
Q 040741 210 GVIQP---MEEIGQICKEFKIPFHTDAAQALGK----I--PVD-VEK-WNVSLMSLSGHKIYGPKG--VGALYMRRRPRI 276 (457)
Q Consensus 210 G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~----~--~~~-~~~-~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~ 276 (457)
|.+.+ +++|.++|++|++++++|++++... . ++. ... .+.++++.|++|.||.+| +|+++++++.++
T Consensus 173 G~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~ 252 (387)
T PRK07777 173 GTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPLIA 252 (387)
T ss_pred CccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHHHHH
Confidence 99986 7789999999999999999986421 1 111 111 246789999999888556 799998876655
Q ss_pred cccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEE
Q 040741 277 RVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNL 356 (457)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 356 (457)
++....... ....+.+...++..++......+++..+.++++++++.+.|.+ . ++.+..+. . ..++.+
T Consensus 253 ~~~~~~~~~-------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-~~~~~~~~-g--~~~~~~ 320 (387)
T PRK07777 253 AVRAAKQYL-------TYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAE-A-GFEVHDSA-G--TYFLCA 320 (387)
T ss_pred HHHHHHhhc-------ccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHh-C-CCCccCCC-c--ceEEEe
Confidence 544322110 1122333333444444333344677788899999999999988 4 55554332 1 222333
Q ss_pred EEc---cccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHH
Q 040741 357 SFA---YVEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 357 ~~~---~~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~ 430 (457)
.++ ..++.++...| .||.+.+|..+.. ......+++||+++. ++++++..+++|.++.
T Consensus 321 ~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~--------------~~~~~~~~~Ri~~~~--~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 321 DPRPLGYDDGTEFCRALPERVGVAAIPMSVFYD--------------PADAWNHLVRFAFCK--RDDTLDEAIRRLRALR 384 (387)
T ss_pred cccccCCCCHHHHHHHHHHhCCEEEeCchHhCC--------------CCcCCCCeEEEEecC--CHHHHHHHHHHHHHHh
Confidence 332 12456777766 4899999875432 111223789999985 6899999999888754
No 147
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.95 E-value=1.2e-25 Score=219.93 Aligned_cols=313 Identities=14% Similarity=0.135 Sum_probs=224.5
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHH-HHHhcCc
Q 040741 93 HLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCR-HLQQEGF 171 (457)
Q Consensus 93 ~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~G~ 171 (457)
+.|++...+....+++.++++-|.+. +++++||+.|+++++.++. ++||+|+++...|.+....++ .+++.|+
T Consensus 54 ~~YsR~~nPt~~~le~~la~LEg~~~--a~~~~SGmaAi~~~~~~ll----~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi 127 (395)
T PRK08114 54 LFYGRRGTLTHFSLQEAMCELEGGAG--CALYPCGAAAVANAILAFV----EQGDHVLMTGTAYEPTQDFCSKILSKLGV 127 (395)
T ss_pred ccccCCCChhHHHHHHHHHHHhCCCe--EEEEhHHHHHHHHHHHHHc----CCCCEEEEeCCCcHHHHHHHHHHHHhcCc
Confidence 45566666889999999999998764 8888889999999999987 899999999999988887764 4566799
Q ss_pred EEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcC--CcEEEehhhhcCCCcccCCCCcc
Q 040741 172 EITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFK--IPFHTDAAQALGKIPVDVEKWNV 249 (457)
Q Consensus 172 ~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~--v~li~D~a~~~g~~~~~~~~~~~ 249 (457)
++.+++.. |.++++++|+++|++|+++++.||+|.+.|+++|+++||+++ +++++|.+++.|.. +++.++++
T Consensus 128 ~v~~vd~~-----d~~~l~~~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~-~~pl~~Ga 201 (395)
T PRK08114 128 TTTWFDPL-----IGADIAKLIQPNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL-FKALDFGI 201 (395)
T ss_pred EEEEECCC-----CHHHHHHhcCCCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc-cCHHHcCC
Confidence 99998854 789999999999999999999999999999999999999984 99999999999876 88888999
Q ss_pred cEEEecccc-ccCCC--CceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 040741 250 SLMSLSGHK-IYGPK--GVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALH 326 (457)
Q Consensus 250 Di~~~s~~K-~~g~~--G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~ 326 (457)
|+++.|.|| +.|+. ++|+++.+++..+++...... .....++....-+... .+.+.-++++..+++
T Consensus 202 Divv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~-------~G~~~~p~~a~l~~rg----l~TL~lR~~~~~~na 270 (395)
T PRK08114 202 DISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENSYL-------MGQMVDADTAYMTSRG----LRTLGVRLRQHEESS 270 (395)
T ss_pred cEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHHHh-------ccCCCCHHHHHHHHcC----CCcHHHHHHHHHHHH
Confidence 999999999 56654 578777665433333221111 1113333333322111 124678889999999
Q ss_pred HHHHHHHhhcCCCeE-EeCC--CC-----------CcccceEEEEEccc----cchHHHhccc--CeEecccCccCCCCC
Q 040741 327 DRLLNGIKEKLDGVV-VNGS--ME-----------RRYIGNLNLSFAYV----EGESLLMGLK--EVAVSSGSACTSASL 386 (457)
Q Consensus 327 ~~l~~~l~~~~~~~~-~~~~--~~-----------~~~~~~~~~~~~~~----~~~~~~~~l~--~i~~~~g~~~~~~~~ 386 (457)
..+.+.|++ .|.+. |+-+ ++ ...++++.|.+++. ....++..|+ .++++-|...+....
T Consensus 271 ~~va~~L~~-hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~f~~~l~l~~~a~SlGg~~SLi~~ 349 (395)
T PRK08114 271 LKVAEWLAE-HPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDEQLANYLDNFSLFSMAYSWGGFESLILA 349 (395)
T ss_pred HHHHHHHHc-CCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccHHHHHHHHHhCCcceeecccCCccceecc
Confidence 999999999 78764 3322 11 23577888887631 1234555553 556666665443321
Q ss_pred ChhHHHHHcCCC--ccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 387 EPSYVLRALGVD--EDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 387 ~~~~~l~~~g~~--~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
..........-. ....++.||++++. ||+|.+++.|+++++.+
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~liRlSvGl----Ed~~DLi~Dl~~Al~~~ 394 (395)
T PRK08114 350 NQPEEIAAIRPAGEVDFTGTLIRLHIGL----EDVDDLIADLAAGFARI 394 (395)
T ss_pred CCchhhhccCChhHhcCCCCeEEEEecc----CCHHHHHHHHHHHHHhh
Confidence 000111111100 01233899999996 78899999999988753
No 148
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.95 E-value=7e-25 Score=212.27 Aligned_cols=321 Identities=18% Similarity=0.201 Sum_probs=247.4
Q ss_pred CcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhC-CCCCcEEEeCChHHHHHHH
Q 040741 57 RPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIG-ASPKEIIFTSGATESNNVS 134 (457)
Q Consensus 57 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g-~~~~~i~~t~g~T~a~~~a 134 (457)
+.+.|+.+.+. ++|+.+.+++.+......-+|+. ...++++.++++.| .++++|+.++|+++.+..+
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~~~~~~rYPd~-----------~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l 91 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAALDKLNRYPDP-----------DYRELRAALAEYYGVVDPENVLVGNGSDELIELL 91 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHHHHhhccCCCC-----------cHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHH
Confidence 56788887777 56689999998887654444442 57789999999999 7888899999999999999
Q ss_pred HHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccC
Q 040741 135 IKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQP 214 (457)
Q Consensus 135 l~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~ 214 (457)
+++++ .+||.|++..++|..+...++.. |++++.++... +..|++.+.+++++++++|++++||||||...+
T Consensus 92 ~~~~~----~~gd~vl~~~Ptf~~Y~~~a~~~---g~~~~~v~~~~-~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~ 163 (356)
T COG0079 92 VRAFV----EPGDTVLIPEPTFSMYEIAAQLA---GAEVVKVPLKE-FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLP 163 (356)
T ss_pred HHHhh----cCCCEEEEcCCChHHHHHHHHhc---CCeEEEecccc-cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCC
Confidence 99999 89999999999999888777766 99999999887 889999999999999999999999999999999
Q ss_pred hHHHHHHHHhc--CCcEEEehhhhcCCCc--ccC-CCCcccEEEeccccccCCCC--ceEEEEecCCCccccccccCCcc
Q 040741 215 MEEIGQICKEF--KIPFHTDAAQALGKIP--VDV-EKWNVSLMSLSGHKIYGPKG--VGALYMRRRPRIRVEPLINGGGQ 287 (457)
Q Consensus 215 l~~i~~l~~~~--~v~li~D~a~~~g~~~--~~~-~~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~~ 287 (457)
.++|.+++... +.++++|+|+.=...+ ... ...+.-+++-||+|.||.+| +|+.+.+++.++.+.....-|
T Consensus 164 ~~~l~~l~~~~~~~~~vVvDEAY~eF~~~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i~~l~~vr~p~-- 241 (356)
T COG0079 164 REELRALLEALPEGGLVVIDEAYIEFSPESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPELIAALNKVRPPF-- 241 (356)
T ss_pred HHHHHHHHHhCCCCcEEEEeCchhhcCCchhhhhccCCCCEEEEEecHHhhhcchhceeeccCCHHHHHHHHHhcCCC--
Confidence 88888877754 8899999999732221 111 12222477889999998776 999999988777776655432
Q ss_pred ccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHH
Q 040741 288 ERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLL 367 (457)
Q Consensus 288 ~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (457)
..+.+...+..++++.- +.+++..++..+.++++.+.|++ ++...++.+. .+++.+.++......+.
T Consensus 242 -------~v~~~a~~aa~aal~~~-~~~~~~~~~~~~~r~rl~~~l~~-~~~~~v~pS~----aNFvlv~~~~~~~~~l~ 308 (356)
T COG0079 242 -------NVSSPALAAAIAALRDA-DYLEESVERIREERERLYAALKA-LGLFGVFPSQ----ANFVLVRVPDAEAAALA 308 (356)
T ss_pred -------CCCHHHHHHHHHHcccH-HHHHHHHHHHHHHHHHHHHHHHh-CCCCeecCCC----CcEEEEECCCccHHHHH
Confidence 45666666666666544 56888999999999999999999 6523254432 56666666531233566
Q ss_pred hcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 368 MGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 368 ~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
..| +||.++.-.. .....+++||+++ ++|+-++++++|.++++.
T Consensus 309 ~~L~~~giivR~~~~------------------~~~~~~~lRitvg---t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 309 EALLKKGILVRDCSS------------------VGLLPGYLRITVG---TPEENDRLLAALREVLKG 354 (356)
T ss_pred HHHHHCCEEEEeCCC------------------CCCCCCeEEEEeC---CHHHHHHHHHHHHHHHhc
Confidence 666 6888875421 1122379999999 488889999999988764
No 149
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.95 E-value=4.2e-25 Score=220.30 Aligned_cols=328 Identities=16% Similarity=0.131 Sum_probs=225.8
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh----C---CCCC-cEEEeCC
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI----G---ASPK-EIIFTSG 126 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~----g---~~~~-~i~~t~g 126 (457)
.+.+.|..+.+. .+++.+.+++.+.+... . ...|+ .....++++.+++++ | ++++ +|++|+|
T Consensus 44 ~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~----~--~~~Y~---~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~G 114 (410)
T PRK06290 44 MELIDMGVGEPDEMADESVVEVLCEEAKKP----E--NRGYA---DNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIG 114 (410)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhCC----C--CCCCC---CCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccC
Confidence 345777776666 46677888887765321 0 01111 023456666666664 4 5565 6999999
Q ss_pred hHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC--CCCCCHHHHHHhcCCCceEEEEec
Q 040741 127 ATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA--DGIVNLDELRAAIRPDTGLISVMA 204 (457)
Q Consensus 127 ~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~le~~i~~~t~li~i~~ 204 (457)
+++++.+++.++. ++|+.|+++.+.|+.+...++.. |.+++.++.+. ++.+|++++++++.+++++|++++
T Consensus 115 s~~al~~~~~~~~----~~gd~Vlv~~P~y~~~~~~~~~~---g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~n 187 (410)
T PRK06290 115 SKPALAMLPSCFI----NPGDVTLMTVPGYPVTGTHTKYY---GGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNY 187 (410)
T ss_pred HHHHHHHHHHHhC----CCCCEEEEeCCCCccHHHHHHHc---CCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEEC
Confidence 9999999999988 89999999999999988777666 99999999874 346799999999988999999999
Q ss_pred cccccccccC---hHHHHHHHHhcCCcEEEehhhhcCC---Cccc---CC-CCcccEEEeccccccCCCC--ceEEEEec
Q 040741 205 VNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGK---IPVD---VE-KWNVSLMSLSGHKIYGPKG--VGALYMRR 272 (457)
Q Consensus 205 ~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~---~~~~---~~-~~~~Di~~~s~~K~~g~~G--~G~l~~~~ 272 (457)
++||||.+++ +++|.++|++||++|++|++|.... .+.. .. ..+.++++.|++|.+|.+| +|++++++
T Consensus 188 P~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~ 267 (410)
T PRK06290 188 PNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNE 267 (410)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEeCH
Confidence 9999999999 5778888999999999999997432 1111 11 1245799999999887666 89999987
Q ss_pred CCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccc
Q 040741 273 RPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIG 352 (457)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 352 (457)
+.++++....... .. ..+.+...++..+++. .+.+++..++++++++++.+.|++ + ++.+..+. . ..
T Consensus 268 ~l~~~l~~~~~~~------~~-~~~~~~q~aa~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~p~-g--~f 334 (410)
T PRK06290 268 LIVKAFATVKDNN------DS-GQFIAIQKAGIYALDH-PEITEKIREKYSRRLDKLVKILNE-V-GFKAEMPG-G--TF 334 (410)
T ss_pred HHHHHHHHHHhcc------cc-CCcHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHHHHHHHh-C-CCeecCCC-e--ee
Confidence 7665554333211 11 2222233333334332 123567788888999999999998 5 66654321 1 22
Q ss_pred eEEEEEcc--------ccchHHHhcc--c-CeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCC-CCHHHHH
Q 040741 353 NLNLSFAY--------VEGESLLMGL--K-EVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRF-TTEAEVD 420 (457)
Q Consensus 353 ~~~~~~~~--------~~~~~~~~~l--~-~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~-~t~edid 420 (457)
++.+.++. .+..++...| + ++.+.+|..+ ++++||+++.. .++|+.+
T Consensus 335 ~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~---------------------~~~lRi~~~~~~~~~~~~~ 393 (410)
T PRK06290 335 YLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDA---------------------GHFLRFSVTFEAKDEEEED 393 (410)
T ss_pred EEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCccc---------------------cCeEEEEEEcccccccchh
Confidence 22334432 1345666666 3 4555554321 16899999753 4688999
Q ss_pred HHHHHHHHHHHHH
Q 040741 421 RAIELTVKQVEKL 433 (457)
Q Consensus 421 ~~~~~l~~~~~~~ 433 (457)
+++++|++.+.++
T Consensus 394 ~~~~~l~~~~~~~ 406 (410)
T PRK06290 394 RILEEIKRRLSDV 406 (410)
T ss_pred HHHHHHHHHHhhc
Confidence 9999999888764
No 150
>PRK05968 hypothetical protein; Provisional
Probab=99.95 E-value=1.5e-25 Score=221.68 Aligned_cols=308 Identities=13% Similarity=0.095 Sum_probs=221.6
Q ss_pred chhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHH-HHHhcCcE
Q 040741 94 LFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCR-HLQQEGFE 172 (457)
Q Consensus 94 ~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~G~~ 172 (457)
.|+....+.+.++++.+++++|.+. .+++++|+.|+.+++.++. ++||+|+++.+.|.+....+. .+...|++
T Consensus 56 ~Y~r~~~p~~~~le~~lA~l~g~~~--av~~~sG~~Ai~~al~al~----~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~ 129 (389)
T PRK05968 56 IYSRGDNPTVRAFEEMLAKLEGAED--ARGFASGMAAISSTVLSFV----EPGDRIVAVRHVYPDAFRLFETILKRMGVE 129 (389)
T ss_pred cccCCCChhHHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHHh----CCCCEEEEeCCCchHHHHHHHHHHHHcCce
Confidence 3444445779999999999999864 5667888999999998887 899999999999988765443 44566999
Q ss_pred EEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEE
Q 040741 173 ITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLM 252 (457)
Q Consensus 173 v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~ 252 (457)
+++++.+ |++++++++ ++|++|+++++.|+++.+.++++|.++|+++|+++++|++++.+..... ...++|++
T Consensus 130 v~~vd~~-----d~~~l~~~i-~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~p-~~~g~Div 202 (389)
T PRK05968 130 VDYVDGR-----DEEAVAKAL-PGAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQRP-ITLGVDLV 202 (389)
T ss_pred EEEeCCC-----CHHHHHHhc-ccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccCc-hhcCCcEE
Confidence 9999755 899999998 6789999999999999999999999999999999999999987643222 23578999
Q ss_pred EeccccccC-CCC--ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 040741 253 SLSGHKIYG-PKG--VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRL 329 (457)
Q Consensus 253 ~~s~~K~~g-~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l 329 (457)
+.|++|+++ +.+ .|+++.+++..++++.....+ ..+..+......+..++ +.+..+.++..++++++
T Consensus 203 v~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~------~g~~~~~~~A~~~l~~L----~tl~~r~~~~~~~a~~l 272 (389)
T PRK05968 203 IHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPY------LGAKLSPFEAWLLLRGL----RTLPLRMKAHEASALEI 272 (389)
T ss_pred EeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHh------CCCCCChHHHHHHHccc----CcHHHHHHHHHHHHHHH
Confidence 999999654 433 588887776555554322100 01133332222222222 24677788888889999
Q ss_pred HHHHhhcCCCeEEeCCCC---------CcccceEEEEEc-cccchHHHhcc--cCeEecccCccCCC---CCC-----hh
Q 040741 330 LNGIKEKLDGVVVNGSME---------RRYIGNLNLSFA-YVEGESLLMGL--KEVAVSSGSACTSA---SLE-----PS 389 (457)
Q Consensus 330 ~~~l~~~~~~~~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~~~l--~~i~~~~g~~~~~~---~~~-----~~ 389 (457)
.+.|++ .|++..+..+. ..+++++.|.+. +.+..++...| .+++++.|..|+.. +.. +.
T Consensus 273 a~~L~~-~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~~~~f~~~L~~~~~~~s~G~~~slv~p~~~~~~~~~~~ 351 (389)
T PRK05968 273 ARRLKA-HPVVERVCHPALANHPPAGLSGTSGLFSFIFREGIDVRAFADALKLFRLGVSWGGHESLVVPAEVVLQQKAQP 351 (389)
T ss_pred HHHHHh-CCCccEEECCCCCCChHHhCCCCceEEEEEECCHHHHHHHHHhCCccEEecCCCCCCceeeeCcccccccCCH
Confidence 999998 88885543221 134567778875 33455677777 57888889888732 211 12
Q ss_pred HHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 390 YVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 390 ~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
-..+..|+++ +.||++++. |+.+.+++.|++++++.
T Consensus 352 ~~~~~~gi~~----~liR~SvGl----E~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 352 NSAARFGVSP----RSVRLHVGL----EGTEALWADLEQALAAA 387 (389)
T ss_pred HHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHHHh
Confidence 2344667654 899999997 66777777777777643
No 151
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.95 E-value=7.5e-25 Score=218.21 Aligned_cols=330 Identities=16% Similarity=0.153 Sum_probs=222.0
Q ss_pred cEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhC------CCCCcEEEeCChHHH
Q 040741 58 PLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIG------ASPKEIIFTSGATES 130 (457)
Q Consensus 58 ~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g------~~~~~i~~t~g~T~a 130 (457)
.+.|..+.+. ++++.+.+++.+.+....... .. |.......++++.++++++ ++++++++|+|++++
T Consensus 35 ~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~----~~--y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~a 108 (394)
T PRK06836 35 VFDFSLGNPSVPPPAAVKEALRELAEEEDPGL----HG--YMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGA 108 (394)
T ss_pred eEEecCcCCCCCCCHHHHHHHHHHHhcCCcCc----cc--CCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHH
Confidence 3556554443 457888998888775321111 11 1112346667777777764 568889999999999
Q ss_pred HHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCC-CCCCHHHHHHhcCCCceEEEEecccccc
Q 040741 131 NNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGAD-GIVNLDELRAAIRPDTGLISVMAVNNEI 209 (457)
Q Consensus 131 ~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~-~~~d~~~le~~i~~~t~li~i~~~~~~~ 209 (457)
+..++.+++ .+|+.|+++.+.|..+...++.. |.++++++.+.+ +.+|+++++++++++++++++++++||+
T Consensus 109 l~~~~~~l~----~~gd~Vli~~p~~~~~~~~~~~~---g~~v~~v~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPt 181 (394)
T PRK06836 109 LNVALKAIL----NPGDEVIVFAPYFVEYRFYVDNH---GGKLVVVPTDTDTFQPDLDALEAAITPKTKAVIINSPNNPT 181 (394)
T ss_pred HHHHHHHhc----CCCCEEEEcCCCCccHHHHHHHc---CCEEEEEecCCccCcCCHHHHHhhcCcCceEEEEeCCCCCC
Confidence 999999987 89999999999998887665544 999999998765 6799999999999999999999999999
Q ss_pred ccccC---hHHHHHHHHh------cCCcEEEehhhhcCCC---c-cc-CCCCcccEEEeccccccCCCC--ceEEEEecC
Q 040741 210 GVIQP---MEEIGQICKE------FKIPFHTDAAQALGKI---P-VD-VEKWNVSLMSLSGHKIYGPKG--VGALYMRRR 273 (457)
Q Consensus 210 G~~~~---l~~i~~l~~~------~~v~li~D~a~~~g~~---~-~~-~~~~~~Di~~~s~~K~~g~~G--~G~l~~~~~ 273 (457)
|.++| +++|+++|++ ||+++++|+++..-.. + .. ....+..+++.|++|.+|.+| +|+++++++
T Consensus 182 G~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~ 261 (394)
T PRK06836 182 GVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVNPE 261 (394)
T ss_pred CcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCcceeeEEEecCHH
Confidence 99998 5667778998 8999999999863211 1 11 112234688899999887555 999999865
Q ss_pred CCcc--ccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCccc
Q 040741 274 PRIR--VEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYI 351 (457)
Q Consensus 274 ~~~~--~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 351 (457)
..+. +...........+ ....+.....++...+ .+. ...+++++.++.+.+.|++ + ++.+..+. . +
T Consensus 262 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l---~~~--~~~~~~~~~r~~l~~~L~~-~-g~~~~~~~-g--g 329 (394)
T PRK06836 262 MEDADDLVAALVFANRILG--FVNAPALMQRVVAKCL---DAT--VDVSIYKRNRDLLYDGLTE-L-GFECVKPQ-G--A 329 (394)
T ss_pred HhhhHHHHHHHHHHhhccc--cccCCHHHHHHHHHHh---CCh--HHHHHHHHHHHHHHHHHHh-C-CCEeecCC-c--e
Confidence 4321 1111100000000 0122222223222222 221 2345677788888888888 5 56554321 1 2
Q ss_pred ceEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Q 040741 352 GNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQ 429 (457)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~ 429 (457)
.++.+.++..+..++...+ +||.+.+|..+.. .+++||+++ .++++++..+++|+++
T Consensus 330 ~~~~~~~~~~~~~~~~~~l~~~gv~v~~g~~f~~-------------------~~~iRi~~~--~~~~~~~~~i~~l~~~ 388 (394)
T PRK06836 330 FYLFPKSPEEDDVAFCEKAKKHNLLLVPGSGFGC-------------------PGYFRLSYC--VDTETIERSLPAFEKL 388 (394)
T ss_pred EEEEEeCCCCCHHHHHHHHHhCCEEEECchhcCC-------------------CCeEEEEec--CCHHHHHHHHHHHHHH
Confidence 2333334433556666555 6899998864421 279999998 4799999999999999
Q ss_pred HHHH
Q 040741 430 VEKL 433 (457)
Q Consensus 430 ~~~~ 433 (457)
+++.
T Consensus 389 l~~~ 392 (394)
T PRK06836 389 AKEY 392 (394)
T ss_pred HHHh
Confidence 8765
No 152
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.95 E-value=5e-25 Score=220.11 Aligned_cols=331 Identities=16% Similarity=0.162 Sum_probs=221.1
Q ss_pred CcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh----C--CCCC-cEEEeCChH
Q 040741 57 RPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI----G--ASPK-EIIFTSGAT 128 (457)
Q Consensus 57 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~----g--~~~~-~i~~t~g~T 128 (457)
+.+.|..+.+. +.++.+++++.+..... . . .+|.......++|+.+++++ | ++++ ++++|+|++
T Consensus 34 ~~~~l~~g~p~~~~~~~~~~~~~~~~~~~--~----~--~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~ 105 (403)
T PRK08636 34 DIIDFSMGNPDGPTPQHIIDKLCESAQKP--K----T--HGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSK 105 (403)
T ss_pred CEEEcCCcCCCCCCCHHHHHHHHHHhcCC--c----c--CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChH
Confidence 44556554444 34666777776654321 0 0 11111123445555555554 6 4566 699999999
Q ss_pred HHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC--CCCCCCHHH----HHHhcC---CCceE
Q 040741 129 ESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG--ADGIVNLDE----LRAAIR---PDTGL 199 (457)
Q Consensus 129 ~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~----le~~i~---~~t~l 199 (457)
+|+.+++.+++ ++||.|++.++.|+.+...+... |.+++.++.+ .+..+|++. ++++++ +++++
T Consensus 106 ~al~~~~~~l~----~~gd~Vlv~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~ 178 (403)
T PRK08636 106 EGYVHLVQAIT----NPGDVAIVPDPAYPIHSQAFILA---GGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKY 178 (403)
T ss_pred HHHHHHHHHhC----CCCCEEEEcCCCCcchHHHHHhc---CCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceE
Confidence 99999999998 89999999999999998877766 9999999875 335688764 466664 57889
Q ss_pred EEEeccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCCC----cc---cCCCC-cccEEEeccccccCCCC--ce
Q 040741 200 ISVMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKI----PV---DVEKW-NVSLMSLSGHKIYGPKG--VG 266 (457)
Q Consensus 200 i~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~----~~---~~~~~-~~Di~~~s~~K~~g~~G--~G 266 (457)
+++++++||||.+++ +++|+++|++|+++||+|++++.... .. .+... +..+++.|++|.+|.+| +|
T Consensus 179 i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG 258 (403)
T PRK08636 179 VVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVG 258 (403)
T ss_pred EEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceee
Confidence 999999999999998 56788899999999999999873211 11 12111 23355789999887555 99
Q ss_pred EEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCC
Q 040741 267 ALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSM 346 (457)
Q Consensus 267 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 346 (457)
+++.+++++.++...... ...+...+.+. ++..++......+++..+.++++++.+.+.|++ . ++.+..+
T Consensus 259 ~iv~~~~li~~~~~~~~~------~~~~~~~~~q~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-~~~~~~p- 328 (403)
T PRK08636 259 FVVGNKKLVGALKKIKSW------LDYGMFTPIQV-AATIALDGDQSCVEEIRETYRKRRDVLIESFAN-A-GWELQKP- 328 (403)
T ss_pred eeeCCHHHHHHHHHHHHH------hcccCChHHHH-HHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH-C-CCcccCC-
Confidence 999887766655443211 01122233333 232343322334677788888889999999988 4 5554332
Q ss_pred CCcccceEEEEEcc----ccchHHHhc-c--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHH
Q 040741 347 ERRYIGNLNLSFAY----VEGESLLMG-L--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEV 419 (457)
Q Consensus 347 ~~~~~~~~~~~~~~----~~~~~~~~~-l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edi 419 (457)
.. +.++.+.++. .+..++... + .||.+.+|..+.. ...+++||+++ .+.+++
T Consensus 329 ~~--g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~-----------------~~~~~iRi~~~--~~~~~l 387 (403)
T PRK08636 329 RA--SMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGE-----------------YGDEYVRIALI--ENENRI 387 (403)
T ss_pred Cc--ceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCc-----------------CCCCeEEEEec--CCHHHH
Confidence 11 3344455542 234566654 3 5899998865421 11379999997 478999
Q ss_pred HHHHHHHHHHHHHH
Q 040741 420 DRAIELTVKQVEKL 433 (457)
Q Consensus 420 d~~~~~l~~~~~~~ 433 (457)
++.+++|+++++.+
T Consensus 388 ~~~~~rl~~~l~~~ 401 (403)
T PRK08636 388 RQAARNIKKFLKEL 401 (403)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998764
No 153
>PLN02242 methionine gamma-lyase
Probab=99.94 E-value=1.5e-25 Score=222.65 Aligned_cols=312 Identities=17% Similarity=0.165 Sum_probs=222.2
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHH--HhcC
Q 040741 93 HLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHL--QQEG 170 (457)
Q Consensus 93 ~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~--~~~G 170 (457)
+.|+....+.+.++++.+++++|.+. +++++||++|+.+++.+++ ++||+|+++.+.|+.+...+... +..|
T Consensus 68 ~~Y~r~~~Pt~~~LE~~lA~l~g~~~--~l~~~sG~~Ai~~al~al~----~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G 141 (418)
T PLN02242 68 YIYSRHFNPTVLNLGRQMAALEGTEA--AYCTASGMSAISSVLLQLC----SSGGHVVASNTLYGGTHALLAHFLPRKCN 141 (418)
T ss_pred ccccCCCChhHHHHHHHHHHHhCCCe--EEEEccHHHHHHHHHHHHh----CCCCEEEEcCCcHHHHHHHHHHhhhhccC
Confidence 44555566899999999999999876 8899999999999999998 89999999999888776654321 2358
Q ss_pred cEEEEEeCCCCCCCCHHHHHHhcCC-CceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcc
Q 040741 171 FEITYLPVGADGIVNLDELRAAIRP-DTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNV 249 (457)
Q Consensus 171 ~~v~~v~~~~~~~~d~~~le~~i~~-~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~ 249 (457)
.++++++.. |++++++++++ ++++|++++++||+|.+.++++|.++|+++|+++++|++++... ++...++.
T Consensus 142 ~~~~~~d~~-----d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~--~~~~~~g~ 214 (418)
T PLN02242 142 ITTTFVDIT-----DLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMV--LSPARLGA 214 (418)
T ss_pred ceEEEcCCC-----CHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccC--CCHHHcCC
Confidence 888887754 89999999998 49999999999999999999999999999999999999996443 23345578
Q ss_pred cEEEeccccccCCCC---ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 040741 250 SLMSLSGHKIYGPKG---VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALH 326 (457)
Q Consensus 250 Di~~~s~~K~~g~~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~ 326 (457)
|+++.|++|.+++.| +|+++.+++.+.++.....+. ....|....+..+ +..+.. ...+..++++..+++
T Consensus 215 divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~----~~~~g~~~~~~~A-~l~~~~--l~tl~~r~~~~~~~a 287 (418)
T PLN02242 215 DVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGA----LMLLGPTMNPKVA-FELSER--LPHLSLRMKEHCRRA 287 (418)
T ss_pred cEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhh----hhccCCCCCHHHH-HHHHcC--CCcHHHHHHHHHHHH
Confidence 999999999776544 588888876655554432210 0112222222222 222221 124566778899999
Q ss_pred HHHHHHHhhcCCCeEEeCCC--C--------------CcccceEEEEEcccc-chHHHhccc------CeEecccCccCC
Q 040741 327 DRLLNGIKEKLDGVVVNGSM--E--------------RRYIGNLNLSFAYVE-GESLLMGLK------EVAVSSGSACTS 383 (457)
Q Consensus 327 ~~l~~~l~~~~~~~~~~~~~--~--------------~~~~~~~~~~~~~~~-~~~~~~~l~------~i~~~~g~~~~~ 383 (457)
+++.+.|++ ++ +.++-+. + ...++++.|.+.+.+ ...++..++ .+++.-|...+.
T Consensus 288 ~~la~~L~~-~~-~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l~~~~~~~~~~~slG~~~sl 365 (418)
T PLN02242 288 MEYAKRMKE-LG-LKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDTEERANRLMRYLQNSTQFGFMAVSLGYYETL 365 (418)
T ss_pred HHHHHHHHh-CC-CEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECCHHHHHHHHHHhhcccccceeeecCCCCCce
Confidence 999999999 64 5565321 1 235677777775321 335566665 456666665432
Q ss_pred C----CCCh----hHHHHHcCCCccCCCCeEEEecCCCCCHH-HHHHHHHHHHHHHHHHH
Q 040741 384 A----SLEP----SYVLRALGVDEDMAHTSIRFGIGRFTTEA-EVDRAIELTVKQVEKLR 434 (457)
Q Consensus 384 ~----~~~~----~~~l~~~g~~~~~~~~~iRi~~~~~~t~e-did~~~~~l~~~~~~~~ 434 (457)
. ...+ .-.....|+++ +.|||+++. | |+|.+++.|++++++++
T Consensus 366 ~~~p~~~~~~~~~~~~~~~~gi~~----~liRlsvGl----E~~~~dli~dl~~al~~~~ 417 (418)
T PLN02242 366 MSCSGSSTSSELDPEEKAAAGISP----GLVRMSVGY----TGTLEQRWSQFEKALSAMK 417 (418)
T ss_pred eeCCCccccccCCHHHHHhcCCCC----CeEEEEecC----CCCHHHHHHHHHHHHHHhh
Confidence 2 1111 11223466654 899999997 7 49999999999998765
No 154
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.94 E-value=1.9e-25 Score=220.84 Aligned_cols=309 Identities=18% Similarity=0.189 Sum_probs=219.3
Q ss_pred chhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHH-HHhcCcE
Q 040741 94 LFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRH-LQQEGFE 172 (457)
Q Consensus 94 ~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~-~~~~G~~ 172 (457)
.|++...+...++++.+++++|.+. +++++||+.|+.+++.++. ++|++|+++.+.|.+....... +...|++
T Consensus 52 ~y~r~~~p~~~~le~~lA~l~g~~~--av~~~sG~~Ai~~~l~al~----~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~ 125 (391)
T TIGR01328 52 IYSRLGNPTVSNLEGRIAFLEGTEA--AVATSSGMGAIAATLLTIL----KAGDHLISDECLYGCTFALLEHALTKFGIQ 125 (391)
T ss_pred ceeCCCCchHHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHHh----CCCCEEEEecCcchHHHHHHHHHHhcCCeE
Confidence 3444445678899999999999876 8899999999999998887 8999999999999877665543 3556999
Q ss_pred EEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEE
Q 040741 173 ITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLM 252 (457)
Q Consensus 173 v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~ 252 (457)
+++++.+ |+++++++++++|++|++++++||+|.+.|+++|.++|+++|+++++|++++.+...... ..+.|++
T Consensus 126 ~~~vd~~-----d~e~l~~~i~~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~~~-~~g~Div 199 (391)
T TIGR01328 126 VDFINMA-----IPEEVKAHIKDNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTNPV-ALGVDVV 199 (391)
T ss_pred EEEECCC-----CHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCCch-hcCCCEE
Confidence 9999876 899999999999999999999999999999999999999999999999999876543222 3578999
Q ss_pred EeccccccCCCC---ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 040741 253 SLSGHKIYGPKG---VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRL 329 (457)
Q Consensus 253 ~~s~~K~~g~~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l 329 (457)
+.|++|++|..| .|+++.+++.+++++...... ...+..+....+.+...+ +.+..++++..+++.++
T Consensus 200 v~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~-----~~g~~l~~~~a~l~l~~L----~tl~~r~~~~~~na~~l 270 (391)
T TIGR01328 200 VHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKD-----MTGSVISPFDAWLILRGL----KTLNIRMKRHSENAMKV 270 (391)
T ss_pred EccccccccCCCCceEEEEEcCHHHHHHHHHHHHHh-----CCCCCCCcHHHHHHHhCc----CcHHHHHHHHHHHHHHH
Confidence 999999776544 578877766555444211100 001133322222222222 24566788889999999
Q ss_pred HHHHhhcCCCeEEeCCC---C-----------CcccceEEEEEccc--cchHHHhccc--CeEecccCccC----CCCCC
Q 040741 330 LNGIKEKLDGVVVNGSM---E-----------RRYIGNLNLSFAYV--EGESLLMGLK--EVAVSSGSACT----SASLE 387 (457)
Q Consensus 330 ~~~l~~~~~~~~~~~~~---~-----------~~~~~~~~~~~~~~--~~~~~~~~l~--~i~~~~g~~~~----~~~~~ 387 (457)
.+.|++ .|++..+-.| + ...++++.|.+++- ....++..|+ .++.+-|...+ +....
T Consensus 271 a~~L~~-~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~ 349 (391)
T TIGR01328 271 AEYLKS-HPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGGFAGAKKLLNNLKLIRLAVSLGDAETLIQHPASMT 349 (391)
T ss_pred HHHHHh-CCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCCHHHHHHHHHhCCcceEecCCCCCcccCcCCCccc
Confidence 999998 7876432111 1 12467788887631 1345556664 44555565433 22221
Q ss_pred h----hHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 388 P----SYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 388 ~----~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
+ .-.....|+.+ +.|||+++. ||+|.+++.|+++++.
T Consensus 350 ~~~~~~~~~~~~gi~~----~liR~svGl----E~~~dl~~dl~~al~~ 390 (391)
T TIGR01328 350 HAVVPKEEREAAGITD----GMIRLSVGL----EDADDLIADLKQALDA 390 (391)
T ss_pred cccCCHHHHHhcCCCC----CeEEEEeCc----CCHHHHHHHHHHHHhh
Confidence 1 11233556554 899999997 7899999999998875
No 155
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=1e-24 Score=215.51 Aligned_cols=318 Identities=18% Similarity=0.135 Sum_probs=221.7
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHH
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVS 134 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~a 134 (457)
.+.+.|+.+.+. .+++.+.+++.+.......+|.. .. .++++.+++++|++++++++|+|+++++.++
T Consensus 36 ~~~i~l~~~~~~~~~~~~~~~al~~~~~~~~~Y~~~----------~g-~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~ 104 (371)
T PRK05166 36 PRIAKLGSNENPLGPSPAVRRAFADIAELLRLYPDP----------QG-RALREAIAARTGVPADRIILGNGSEDLIAVI 104 (371)
T ss_pred cceEEcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCC----------cH-HHHHHHHHHHhCcCHHHEEEcCCHHHHHHHH
Confidence 356777776555 56788888887754432222211 12 3799999999999988999999999999999
Q ss_pred HHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccC
Q 040741 135 IKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQP 214 (457)
Q Consensus 135 l~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~ 214 (457)
+.++. ++||+|++..++|+.+...++.. |.+++.++.+.++.+|+++++++++++++++++++++||||.+.+
T Consensus 105 ~~~~~----~~gd~vli~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~ 177 (371)
T PRK05166 105 CRAVL----RPGDRVVTLYPSFPLHEDYPTMM---GARVERVTVTPDLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLT 177 (371)
T ss_pred HHHhc----CCCCEEEEcCCChHHHHHHHHHc---CCeEEEeecCCCCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCC
Confidence 99887 89999999999998776665554 999999999877789999999999989999999999999999999
Q ss_pred hHHHHHHHHh--cCCcEEEehhhhcCCC----c--cc-CCCC-cccEEEeccccccCCCC--ceEEEEe-cCCCcccccc
Q 040741 215 MEEIGQICKE--FKIPFHTDAAQALGKI----P--VD-VEKW-NVSLMSLSGHKIYGPKG--VGALYMR-RRPRIRVEPL 281 (457)
Q Consensus 215 l~~i~~l~~~--~~v~li~D~a~~~g~~----~--~~-~~~~-~~Di~~~s~~K~~g~~G--~G~l~~~-~~~~~~~~~~ 281 (457)
.+++.++++. .++++++|+++.-... + .. .... ...+++.|++|.||.+| +|++++. ++..+.+...
T Consensus 178 ~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~ 257 (371)
T PRK05166 178 ADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRV 257 (371)
T ss_pred HHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHHHh
Confidence 7777666654 3789999999863221 1 01 1111 23478899999888555 8998864 4443433322
Q ss_pred ccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccc
Q 040741 282 INGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYV 361 (457)
Q Consensus 282 ~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (457)
... ...+.....++.+++.. .+.+++..+.++++++++.+.|++ . ++.+.. +. +.++.+.++ .
T Consensus 258 ~~~---------~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~-~-g~~~~p-~~---g~fl~~~~~-~ 320 (371)
T PRK05166 258 RTP---------FNVNGAAQAAALAALDD-EEHLAKGVALALAERERLKKELAE-M-GYRIAP-SR---ANFLFFDAR-R 320 (371)
T ss_pred ccC---------CCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHH-C-cCeeCC-Cc---CCEEEEeCC-C
Confidence 211 12343333333344432 234677778888888999999998 5 665432 22 334444433 2
Q ss_pred cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHH
Q 040741 362 EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 362 ~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~ 430 (457)
+..++...+ +||.+.+|... + ..++|||+++. .++.+++++.|++.+
T Consensus 321 ~~~~l~~~l~~~gi~v~p~~~~--------------~-----~~~~iRi~~~~---~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 321 PASAVAEALLRQGVIVKPWKQP--------------G-----FETFIRVSIGS---PEENDHFVAALDKVL 369 (371)
T ss_pred CHHHHHHHHHHCCeEEecCCCC--------------C-----CCCeEEEEcCC---HHHHHHHHHHHHHHh
Confidence 445666665 68988876421 1 13799999984 677888888887654
No 156
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.94 E-value=2.5e-25 Score=219.75 Aligned_cols=300 Identities=14% Similarity=0.149 Sum_probs=211.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHH-HHHhcCcEEEEEe
Q 040741 99 SEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCR-HLQQEGFEITYLP 177 (457)
Q Consensus 99 ~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~G~~v~~v~ 177 (457)
..+...++++.+++++|++. +++++||++|+.+++.++. ++|++|+++...|.+...... .+...|.++++++
T Consensus 52 ~~p~~~~le~~la~l~g~~~--~~~~~sG~~Ai~~al~al~----~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~ 125 (380)
T TIGR01325 52 ANPTVAAFEERIAALEGAER--AVATATGMSAIQAALMTLL----QAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVD 125 (380)
T ss_pred CCchHHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHHh----CCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEEC
Confidence 34678899999999999854 8899999999999999887 899999999988887655443 3456699999998
Q ss_pred CCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccc
Q 040741 178 VGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGH 257 (457)
Q Consensus 178 ~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~ 257 (457)
.+ |++++++++++++++|++++++||+|.+.|+++|.++|+++|+++++|++++.+..... ...++|+++.|++
T Consensus 126 ~~-----d~~~l~~~i~~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~~p-l~~g~Divv~S~s 199 (380)
T TIGR01325 126 PT-----DLNAWEAAVKPNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQQP-LKLGADVVVYSAT 199 (380)
T ss_pred CC-----CHHHHHHhcCCCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCc-hhhCCCEEEeecc
Confidence 65 89999999999999999999999999999999999999999999999999975432222 2457899999999
Q ss_pred cccCCCC---ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHh
Q 040741 258 KIYGPKG---VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIK 334 (457)
Q Consensus 258 K~~g~~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~ 334 (457)
|++++.| .|+++.+++..+++....... .++.++.....+... .+.+..++++..+++.++.+.|+
T Consensus 200 K~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~-------g~~~~p~~a~~~l~~----l~tl~~r~~~~~~~a~~la~~L~ 268 (380)
T TIGR01325 200 KHIDGQGRVMGGVIAGSEELMAEVAVYLRHT-------GPAMSPFNAWVLLKG----LETLSLRMQKQFDSALAIAEWLQ 268 (380)
T ss_pred ceecCCCCeEEEEEEeCHHHHHHHHHHHHhh-------CCCCCHHHHHHHHhc----cCcHHHHHHHHHHHHHHHHHHHH
Confidence 9776543 377777766555544332211 112232222222222 23456678888889999999998
Q ss_pred hcCCCeEEeCCC---C-----------CcccceEEEEEccc-cchHHHhccc--CeEecccCccC----CCCCChh----
Q 040741 335 EKLDGVVVNGSM---E-----------RRYIGNLNLSFAYV-EGESLLMGLK--EVAVSSGSACT----SASLEPS---- 389 (457)
Q Consensus 335 ~~~~~~~~~~~~---~-----------~~~~~~~~~~~~~~-~~~~~~~~l~--~i~~~~g~~~~----~~~~~~~---- 389 (457)
+ .|++.-+-.| . ...++++.|.+.+. ....++..|+ .+++.-|...+ +....+.
T Consensus 269 ~-~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~ 347 (380)
T TIGR01325 269 A-QPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVADRAAAWKVLDAVELVSITNNLGDAKSTITHPATTTHGRMQP 347 (380)
T ss_pred c-CCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHcCCcceEcccCCCCCeeeeCCCccCcccCCH
Confidence 8 7776432111 1 23567787887621 1345666664 44555554332 2222111
Q ss_pred HHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHH
Q 040741 390 YVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 390 ~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~ 430 (457)
-.....|+.+ +.|||+++. ||.|.+++.|++++
T Consensus 348 ~~~~~~gi~~----~liR~svGl----E~~~dl~~dl~~al 380 (380)
T TIGR01325 348 EERAAAGIGD----GLVRLSVGL----EDVDDLIADLKRAL 380 (380)
T ss_pred HHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHhhC
Confidence 1223566654 899999997 78888888887753
No 157
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.94 E-value=2.3e-25 Score=218.40 Aligned_cols=291 Identities=23% Similarity=0.248 Sum_probs=215.7
Q ss_pred HHHHHHHHHHHHHhCCC------CCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEE
Q 040741 101 VAVETARSQIADLIGAS------PKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEIT 174 (457)
Q Consensus 101 ~~~~~~~~~la~~~g~~------~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~ 174 (457)
....++++.++++++.. ++++++++|+|+++..++.++. ++|++|+++.+.|.++..+++.. |.+++
T Consensus 36 ~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~----~~g~~vl~~~~~~~~~~~~~~~~---~~~~~ 108 (350)
T cd00609 36 PGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL----NPGDEVLVPDPTYPGYEAAARLA---GAEVV 108 (350)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC----CCCCEEEEcCCCchhHHHHHHHC---CCEEE
Confidence 45666777777777654 5679999999999999999887 78999999999999999887776 99999
Q ss_pred EEeCCCCCCCCH--HHHHHhcCCCceEEEEeccccccccccChHHH---HHHHHhcCCcEEEehhhhcCCCc-------c
Q 040741 175 YLPVGADGIVNL--DELRAAIRPDTGLISVMAVNNEIGVIQPMEEI---GQICKEFKIPFHTDAAQALGKIP-------V 242 (457)
Q Consensus 175 ~v~~~~~~~~d~--~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i---~~l~~~~~v~li~D~a~~~g~~~-------~ 242 (457)
.++.+.++..+. +.+++.+.+++++|++++++|++|.+.|++++ .++|+++|+++|+|++++.+... .
T Consensus 109 ~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~ 188 (350)
T cd00609 109 PVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALA 188 (350)
T ss_pred EEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCccccccc
Confidence 999987776665 67777888899999999999999999986554 58999999999999999864321 2
Q ss_pred cCCCCcccEEEeccccccC--CCCceEEEEec-CCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHH
Q 040741 243 DVEKWNVSLMSLSGHKIYG--PKGVGALYMRR-RPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDH 319 (457)
Q Consensus 243 ~~~~~~~Di~~~s~~K~~g--~~G~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~ 319 (457)
.....+.|+++.|++|.++ +.++|++++++ +..+.+..... ...++++.....++..+++...+++++..
T Consensus 189 ~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 261 (350)
T cd00609 189 LLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLP-------YTTSGPSTLSQAAAAAALDDGEEHLEELR 261 (350)
T ss_pred CcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHH-------hcccCCChHHHHHHHHHHhCcHHHHHHHH
Confidence 2344568999999999765 33589999987 44444443221 22346677777777777776545678888
Q ss_pred HHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccc-cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcC
Q 040741 320 KRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYV-EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALG 396 (457)
Q Consensus 320 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g 396 (457)
++++++++++.+.|.+ .+...+.. + ..+..+.+.++.. ....+...+ .||.+..+..+..
T Consensus 262 ~~~~~~~~~l~~~L~~-~~~~~~~~-~--~~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~------------- 324 (350)
T cd00609 262 ERYRRRRDALLEALKE-LGPLVVVK-P--SGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGE------------- 324 (350)
T ss_pred HHHHHHHHHHHHHHHh-cCCccccC-C--CccEEEEEecCCCChHHHHHHHHHhCCEEEeccccccc-------------
Confidence 9999999999999998 55544311 1 2234444444433 233344444 4888876654321
Q ss_pred CCccCCCCeEEEecCCCCCHHHHHHHHHHHHH
Q 040741 397 VDEDMAHTSIRFGIGRFTTEAEVDRAIELTVK 428 (457)
Q Consensus 397 ~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~ 428 (457)
....+|||+++.. ++|+++++++|++
T Consensus 325 ----~~~~~iRi~~~~~--~~~i~~~~~al~~ 350 (350)
T cd00609 325 ----GGEGFVRLSFATP--EEELEEALERLAE 350 (350)
T ss_pred ----CCCCeEEEEeeCC--HHHHHHHHHHhhC
Confidence 2337999999987 9999999998863
No 158
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=2.5e-25 Score=218.05 Aligned_cols=281 Identities=16% Similarity=0.176 Sum_probs=204.0
Q ss_pred HHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCC-CEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCC
Q 040741 103 VETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKK-RHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGAD 181 (457)
Q Consensus 103 ~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g-~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~ 181 (457)
..++++++++++|+++++|++|+|+++++.+++.++. ++| +.|++..++|..+...++.. |++++.++.+.+
T Consensus 59 ~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~----~~g~~~vli~~P~y~~y~~~~~~~---G~~~~~v~~~~~ 131 (351)
T PRK01688 59 PKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFC----EPGKDAILYCPPTYGMYSVSAETI---GVEIRTVPTLDN 131 (351)
T ss_pred hHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhc----CCCCCEEEEcCCCHHHHHHHHHHc---CCEEEEeecCCC
Confidence 4688999999999999999999999999999999887 776 89999999998877666555 999999999877
Q ss_pred CCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhc--CCcEEEehhhhcCCCcc---c-CCCCcccEEEec
Q 040741 182 GIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEF--KIPFHTDAAQALGKIPV---D-VEKWNVSLMSLS 255 (457)
Q Consensus 182 ~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~--~v~li~D~a~~~g~~~~---~-~~~~~~Di~~~s 255 (457)
+.+|++++++++ +++++|++++++||||.+.+.+++.++++.. ++++++|++|.-..... + +..+..-+++.|
T Consensus 132 ~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~rS 210 (351)
T PRK01688 132 WQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVILRT 210 (351)
T ss_pred CCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCCEEEEec
Confidence 889999999988 5899999999999999999977776666532 68899999986332110 1 122234578889
Q ss_pred cccccCCCC--ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHH
Q 040741 256 GHKIYGPKG--VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIA-KKEMDYDHKRITALHDRLLNG 332 (457)
Q Consensus 256 ~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~-~~~~~~~~~~~~~~~~~l~~~ 332 (457)
+||.||.+| +|+++++++.++.+......+ ..+.....++.++++.. .+.+.+..+.+++.++++.+.
T Consensus 211 fSK~~glaGlRiGy~i~~~~~i~~l~~~~~~~---------~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~ 281 (351)
T PRK01688 211 LSKAFALAGLRCGFTLANEEVINLLLKVIAPY---------PLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAA 281 (351)
T ss_pred chHhhcCHHHHHhHHhCCHHHHHHHHhccCCC---------CCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 999998777 799999887766655443221 23333333333344321 234566677778888999999
Q ss_pred HhhcCCCeEEeCCCCCcccceEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEec
Q 040741 333 IKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGI 410 (457)
Q Consensus 333 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~ 410 (457)
|++ ++++..+.+.. .+++.+.+. +...+...| +||.++.+..+. |. .+++||++
T Consensus 282 L~~-~~~~~~~~ps~---~nfi~~~~~--~~~~l~~~L~~~gi~vr~~~~~~-------------~~-----~~~iRis~ 337 (351)
T PRK01688 282 LKE-IPCVEQVFDSE---TNYILARFT--ASSAVFKSLWDQGIILRDQNKQP-------------GL-----SNCLRITI 337 (351)
T ss_pred HHh-CCCCCeECCCC---CcEEEEEcC--CHHHHHHHHHHCCeEEEECCCcC-------------CC-----CCeEEEeC
Confidence 988 77764232221 444455543 456666655 688887643211 11 27999999
Q ss_pred CCCCCHHHHHHHHHHHH
Q 040741 411 GRFTTEAEVDRAIELTV 427 (457)
Q Consensus 411 ~~~~t~edid~~~~~l~ 427 (457)
+ +++|+++++++|+
T Consensus 338 ~---~~~e~~~l~~al~ 351 (351)
T PRK01688 338 G---TREECQRVIDALR 351 (351)
T ss_pred C---CHHHHHHHHHhhC
Confidence 8 5899999998873
No 159
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.94 E-value=1.5e-25 Score=219.08 Aligned_cols=309 Identities=19% Similarity=0.182 Sum_probs=207.9
Q ss_pred CCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCC
Q 040741 66 TTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDK 145 (457)
Q Consensus 66 ~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~ 145 (457)
+..+++.+++++.+...... . +...+...++++.+++++| ++++++++|||+++.+++.++. ++
T Consensus 7 ~~~~~~~v~~a~~~~~~~~~--------~--~~~~~~~~~l~~~~a~~~g--~~~~~~~~~gt~a~~~~~~~l~----~~ 70 (338)
T cd06502 7 VTGPTPEMLEAMAAANVGDD--------V--YGEDPTTAKLEARAAELFG--KEAALFVPSGTAANQLALAAHT----QP 70 (338)
T ss_pred CCCCCHHHHHHHHhcccCCc--------c--cCCCHHHHHHHHHHHHHhC--CCeEEEecCchHHHHHHHHHhc----CC
Confidence 34678999999988653210 1 1122578899999999999 4569999999999999999887 89
Q ss_pred CCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC-------CceEEEEeccccccccc---cCh
Q 040741 146 KRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP-------DTGLISVMAVNNEIGVI---QPM 215 (457)
Q Consensus 146 g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~-------~t~li~i~~~~~~~G~~---~~l 215 (457)
|+.|+++.++|.+...........|.+++.++.+. +.+|++++++++++ ++++|++++++|+ |.+ .++
T Consensus 71 gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l 148 (338)
T cd06502 71 GGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDEL 148 (338)
T ss_pred CCeEEEecCcceeeecCCcHHHHcCceEEeecCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHH
Confidence 99999999999887653222223499999998764 67999999999975 7899999999997 544 347
Q ss_pred HHHHHHHHhcCCcEEEehhhhcCC-----CcccCCCCcccEEEeccccccCCCCceEEEEecCCCccccccccCCccccc
Q 040741 216 EEIGQICKEFKIPFHTDAAQALGK-----IPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQERG 290 (457)
Q Consensus 216 ~~i~~l~~~~~v~li~D~a~~~g~-----~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~ 290 (457)
++|+++|+++|+++|+|+||..+. ..+.....++|+++.|+||++|.+|.++++.+++.++++.+....++.
T Consensus 149 ~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--- 225 (338)
T cd06502 149 KAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPVGAVVVGNRDFIARARRRRKQAGG--- 225 (338)
T ss_pred HHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCccceEEECCHHHHHHHHHHHHHhCC---
Confidence 789999999999999999985331 121111236789999999988866645556676666665543321110
Q ss_pred cccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcccc--chHHHh
Q 040741 291 IRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVE--GESLLM 368 (457)
Q Consensus 291 ~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 368 (457)
..+.+.....+...+++. ..+.+..++..++++++.+.|++ ++ +.+.. ...+++.+.++... ...+..
T Consensus 226 --~~~~~~~~~~a~~~~L~~--~~~~~~~~~~~~~~~~l~~~L~~-~~-~~~~~----~~~~~~~v~~~~~~~~~~~l~~ 295 (338)
T cd06502 226 --GMRQSGFLAAAGLAALEN--DLWLRRLRHDHEMARRLAEALEE-LG-GLESE----VQTNIVLLDPVEANAVFVELSK 295 (338)
T ss_pred --ChhhHHHHHHHHHHHhcC--chHHHHHHHHHHHHHHHHHHHHh-cC-CCccc----ccCCeEEEecCCccHHHHHHHH
Confidence 001222222222223321 13456668888889999999998 54 33322 12444445443211 112332
Q ss_pred cc-----cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHH
Q 040741 369 GL-----KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVK 428 (457)
Q Consensus 369 ~l-----~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~ 428 (457)
.+ +|+.+... ..+.|||+++..++++|++++++++++
T Consensus 296 ~l~~~~~~gi~~~~~-----------------------~~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 296 EAIERRGEGVLFYAW-----------------------GEGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHHHhhhCCEEEEec-----------------------CCCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 22 35554321 117899999999999999999998865
No 160
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=9.1e-25 Score=214.91 Aligned_cols=314 Identities=14% Similarity=0.099 Sum_probs=219.2
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHH
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVS 134 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~a 134 (457)
.+.+.|+.+.+. .+++.+.+++.+......++|. ....++++.++++++++++++++|+|+++++.++
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-----------~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~ 98 (357)
T PRK14809 30 DDLVKLSSNENPHGPSPAAVEAIREAAERVHSYPK-----------ASHADLTAALADRWDVSPEQVWLANGGDGALDYL 98 (357)
T ss_pred cceeEecCCCCCCCCCHHHHHHHHHHHhhhhcCCC-----------CCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHH
Confidence 456788877665 6778889998887654322222 1245899999999999999999999999999999
Q ss_pred HHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC--CCCCCHHHHHHhcCCCceEEEEeccccccccc
Q 040741 135 IKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA--DGIVNLDELRAAIRPDTGLISVMAVNNEIGVI 212 (457)
Q Consensus 135 l~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~ 212 (457)
++++. ++|+.|+++.+.|..+....... |..++.++.+. +..+|++++++.+ +++++|++++++||||.+
T Consensus 99 ~~~~~----~~gd~V~v~~P~y~~~~~~~~~~---g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG~~ 170 (357)
T PRK14809 99 ARAML----DPGDTVLVPDPGFAYYGMSARYH---HGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTGSE 170 (357)
T ss_pred HHHhc----CCCCEEEEeCCChHHHHHHHHHc---CCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCCcC
Confidence 99888 89999999999988776655444 88998888753 3467788887765 467899999999999999
Q ss_pred cChHHHHHHHHhc--CCcEEEehhhhcCCCc---cc-CCCCcccEEEeccccccCCCC--ceEEEEecCCCccccccccC
Q 040741 213 QPMEEIGQICKEF--KIPFHTDAAQALGKIP---VD-VEKWNVSLMSLSGHKIYGPKG--VGALYMRRRPRIRVEPLING 284 (457)
Q Consensus 213 ~~l~~i~~l~~~~--~v~li~D~a~~~g~~~---~~-~~~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~ 284 (457)
.+.+++.++++.. +++||+|+++..-... .. ....+.-+++.|++|.+|.+| +|+++++++.++++.....
T Consensus 171 ~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~- 249 (357)
T PRK14809 171 IPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWADAYARVNT- 249 (357)
T ss_pred CCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCHHHHHHHHHhCC-
Confidence 9987777776654 7899999999732211 11 111223477889999888655 8999998876666544321
Q ss_pred CccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccch
Q 040741 285 GGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGE 364 (457)
Q Consensus 285 ~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (457)
....+.....++..++.. .+.+++..+.+++.++++.+.|.. . . .. + .+.++.+.+. +..
T Consensus 250 --------~~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~-~-~---~~-~---~g~f~~~~~~--~~~ 309 (357)
T PRK14809 250 --------PFAASELACRAGLAALDD-DEHVERTVETARWAREYIREELDA-P-T---WE-S---AGNFVLAEVG--DAS 309 (357)
T ss_pred --------CCCCCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHhcC-c-c---CC-C---CCCEEEEECC--CHH
Confidence 113344444444344432 223566667777777777777755 2 1 11 1 1334444432 455
Q ss_pred HHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 365 SLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 365 ~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
++...+ +||.+.+|..+.. .++|||+++ +.+++++++++|+++++
T Consensus 310 ~~~~~l~~~gv~v~~g~~f~~-------------------~~~iRls~~---~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 310 AVAEAAQERGVIVRDCTSFGL-------------------PECIRITCG---TREETERAVEVLNEVLA 356 (357)
T ss_pred HHHHHHHHCCEEEEECccCCC-------------------CCeEEEecC---CHHHHHHHHHHHHHHhc
Confidence 666655 6999998865421 169999986 47899999999998764
No 161
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=1.1e-24 Score=215.26 Aligned_cols=319 Identities=17% Similarity=0.168 Sum_probs=224.3
Q ss_pred CcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh------CCCCCcEEEeCChHH
Q 040741 57 RPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI------GASPKEIIFTSGATE 129 (457)
Q Consensus 57 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~------g~~~~~i~~t~g~T~ 129 (457)
..+.|+.+.+. ++++.+.+++.+.+...... ...|. .....++++.+++++ ++++++|++|+|+++
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~----~~~Y~---~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~ 99 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAEAAAG----LNRYP---DRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNE 99 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhhhh----hccCC---CCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHH
Confidence 34778777766 68899999999886532111 01111 123466778888887 467889999999999
Q ss_pred HHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcC-CCceEEEEeccccc
Q 040741 130 SNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIR-PDTGLISVMAVNNE 208 (457)
Q Consensus 130 a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~-~~t~li~i~~~~~~ 208 (457)
++.+++.+++ ++|+.|++..+.|+.+...++.. |.+++.++.+.++.+|+++++++++ .++++|++++++||
T Consensus 100 ~l~~~~~~~~----~~gd~v~v~~P~y~~~~~~~~~~---g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NP 172 (368)
T PRK03317 100 ILQQLLQAFG----GPGRTALGFVPSYSMHPIIARGT---HTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNP 172 (368)
T ss_pred HHHHHHHHhc----CCCCEEEEeCCChHHHHHHHHhc---CCeeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCCC
Confidence 9999999998 89999999999998888776654 8888888776667789999999987 46788999999999
Q ss_pred cccccChHHHHHHHHhcCCcEEEehhhhcCCC---c--ccC-CCCcccEEEeccccccCCCC--ceEEEEecCCCccccc
Q 040741 209 IGVIQPMEEIGQICKEFKIPFHTDAAQALGKI---P--VDV-EKWNVSLMSLSGHKIYGPKG--VGALYMRRRPRIRVEP 280 (457)
Q Consensus 209 ~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~---~--~~~-~~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~ 280 (457)
+|.+.+.+++.++++.+++++|+|++|+.... + ... ......+++.|++|.+|.+| +|+++++++.++++..
T Consensus 173 tG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~~~l~~ 252 (368)
T PRK03317 173 TGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVVDALRL 252 (368)
T ss_pred CCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHHHHHHHh
Confidence 99999999999999999999999999974211 1 111 11122366779999887555 8999998776665543
Q ss_pred cccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcc
Q 040741 281 LINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAY 360 (457)
Q Consensus 281 ~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (457)
.... ...+.....++..+++.. +.+.+..++++++++.+.+.|++ . ++.+..+ . .+++.+ ...
T Consensus 253 ~~~~---------~~~s~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~-~---~~~~~~-~~~ 315 (368)
T PRK03317 253 VRLP---------YHLSAVTQAAARAALRHA-DELLASVAALRAERDRVVAWLRE-L-GLRVAPS-D---ANFVLF-GRF 315 (368)
T ss_pred cCCC---------CCCCHHHHHHHHHHhhCH-HHHHHHHHHHHHHHHHHHHHHHH-C-CCEeCCC-C---CcEEEE-ecc
Confidence 2211 134445555555555543 23444556677888888888888 4 6665442 1 222222 121
Q ss_pred ccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 361 VEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 361 ~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
.+...+...+ +||.+.+.. . .+++||+++ +.+++++++++++++++
T Consensus 316 ~~~~~~~~~l~~~Gv~v~~~~-----------------~-----~~~iRi~~~---~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 316 ADRHAVWQGLLDRGVLIRDVG-----------------I-----PGWLRVTIG---TPEENDAFLAALAEVLA 363 (368)
T ss_pred CCHHHHHHHHHHCCEEEEeCC-----------------C-----CCeEEEecC---CHHHHHHHHHHHHHHHH
Confidence 2345555555 688876421 1 179999986 57899999999998875
No 162
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.94 E-value=5.6e-25 Score=217.10 Aligned_cols=345 Identities=17% Similarity=0.167 Sum_probs=238.4
Q ss_pred CCcEEecCCCCCCCCHHHHHHHHHHHhhcc--CCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHH
Q 040741 56 GRPLYLDMQATTPVDPRVLDAMLPFYLSRY--GNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNV 133 (457)
Q Consensus 56 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~ 133 (457)
...|-| .++.+.+++.+++++...+.+.| |.|+.+.|......++...-+.++..++||++..++-.-+ |+.|+..
T Consensus 49 ~~~l~L-iasEN~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~anvqp~S-g~~An~~ 126 (493)
T PRK13580 49 RSSLKL-IASENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEHAYVQPHS-GADANLV 126 (493)
T ss_pred hcCceE-ecccccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCcccccCCC-cHHHHHH
Confidence 343444 45667899999999999988866 5666544332223334444478888999999876666555 7778999
Q ss_pred HHHHhhhhhcCC-------------------------------CCEEEEcCCCCcchHHH---HHHHHhcCcEEEEEeCC
Q 040741 134 SIKGVMHFYKDK-------------------------------KRHVITTQTEHKCVLDS---CRHLQQEGFEITYLPVG 179 (457)
Q Consensus 134 al~~~~~~~~~~-------------------------------g~~vi~~~~~h~~~~~~---~~~~~~~G~~v~~v~~~ 179 (457)
++.+++ +| ||+|+..+..|...... .... ...+++...+++
T Consensus 127 v~~all----~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~-~~~~~~~~y~vd 201 (493)
T PRK13580 127 AFWAIL----AHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNIS-GKMFHQRSYGVD 201 (493)
T ss_pred HHHHHh----cccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchh-hheeeeEecccC
Confidence 999988 44 78998776665443221 1111 112566667777
Q ss_pred -CCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCC------CCcccEE
Q 040741 180 -ADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVE------KWNVSLM 252 (457)
Q Consensus 180 -~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~------~~~~Di~ 252 (457)
.++.+|++++++.+++++.+|++++.++. |...|+++|.++|++||+++++|+||++|.+..+.. ..++|++
T Consensus 202 ~~~g~iD~d~l~~~~~~~~plvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~v 280 (493)
T PRK13580 202 PDTGLLDYDEIAALAREFKPLILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIV 280 (493)
T ss_pred cccCccCHHHHHHHHhhcCCEEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCcEE
Confidence 56889999999999999999999999887 558899999999999999999999999987764431 1268999
Q ss_pred Eecccc-ccCCCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHH
Q 040741 253 SLSGHK-IYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLL 330 (457)
Q Consensus 253 ~~s~~K-~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~ 330 (457)
++|+|| ++||.| |+++++++..+.+.... .+..+++.++.+++...++..+.. +.....+++.+++++|+
T Consensus 281 tgT~hKaL~GP~G-G~I~~~~~l~~~L~~a~-------P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La 352 (493)
T PRK13580 281 TTTTHKTLRGPRG-GLVLAKKEYADAVDKGC-------PLVLGGPLPHVMAAKAVALAEARTPEFQKYAQQVVDNARALA 352 (493)
T ss_pred EeCChhhccCCCe-EEEEecHHHHHHHhhCC-------CcccCCCccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 999999 558986 99999887655552111 122335555567766667776653 35678999999999999
Q ss_pred HHHhhcCCCeEEeCCCCCcccceEEEEEccc--cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeE
Q 040741 331 NGIKEKLDGVVVNGSMERRYIGNLNLSFAYV--EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSI 406 (457)
Q Consensus 331 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~i 406 (457)
+.|.+ .|+.+..... -..++.+.+... ....+...| .||.+..-...+.+ ...+....|
T Consensus 353 ~~L~~--~G~~vv~ggT--dshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~Ptvp-------------~g~~~~srL 415 (493)
T PRK13580 353 EGFLK--RGARLVTGGT--DNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIPSDP-------------NGAWYTSGI 415 (493)
T ss_pred HHHHh--cCCCccCCCC--CCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCCCCC-------------CCCCCCceE
Confidence 99998 4777653211 134555555432 223444455 57776543221110 001224789
Q ss_pred EEecCCC----CCHHHHHHHHHHHHHHHHHH
Q 040741 407 RFGIGRF----TTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 407 Ri~~~~~----~t~edid~~~~~l~~~~~~~ 433 (457)
||+.+.. ++++|++++++.|.++++..
T Consensus 416 RIg~~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 416 RLGTPALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred EeccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 9998884 46999999999999988754
No 163
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=1.4e-24 Score=214.70 Aligned_cols=320 Identities=16% Similarity=0.114 Sum_probs=218.5
Q ss_pred CcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhC--------CCCCcEEEeCCh
Q 040741 57 RPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIG--------ASPKEIIFTSGA 127 (457)
Q Consensus 57 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g--------~~~~~i~~t~g~ 127 (457)
+.+.|+.+.+. ++++.+.+++.+.+..... . ..|. .....++++.++++++ +++++|++|+|+
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~Y~---~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga 100 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQGIE--S---NRYP---DGGHEALKQAIAEYVNESAAGSSQITPANISVGNGS 100 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhccc--c---cCCC---CCchHHHHHHHHHHhCccccccCCCCHHHEEEcCCh
Confidence 45778877776 6889999999887653110 0 0111 1245678888888887 778899999999
Q ss_pred HHHHHHHHHHhhhhhcCCCC-EEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC-CCCCCHHHHHHhcC----CCceEEE
Q 040741 128 TESNNVSIKGVMHFYKDKKR-HVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA-DGIVNLDELRAAIR----PDTGLIS 201 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~~g~-~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~-~~~~d~~~le~~i~----~~t~li~ 201 (457)
++++..++.+++ .+++ .|++..+.|..+...++.. |.+++.++.+. ++.+|+++++++++ .++++|+
T Consensus 101 ~~al~~~~~~~~----~~g~~~Vlv~~P~y~~~~~~~~~~---g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~ 173 (374)
T PRK02610 101 DELIRSLLIATC----LGGEGSILVAEPTFSMYGILAQTL---GIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVF 173 (374)
T ss_pred HHHHHHHHHHHc----CCCCCeEEEcCCChHHHHHHHHHc---CCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEE
Confidence 999998888776 5664 8999999999888877666 99999999864 46799999999886 4789999
Q ss_pred EeccccccccccChHHHHHHHHh-cCCcEEEehhhhcCCCc---ccCCCCcccEEEeccccccCCCC--ceEEEEecCCC
Q 040741 202 VMAVNNEIGVIQPMEEIGQICKE-FKIPFHTDAAQALGKIP---VDVEKWNVSLMSLSGHKIYGPKG--VGALYMRRRPR 275 (457)
Q Consensus 202 i~~~~~~~G~~~~l~~i~~l~~~-~~v~li~D~a~~~g~~~---~~~~~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~ 275 (457)
+++++||||.+.+.+++.++.+- ++++||+|+++.-.... ..+.....-+++.|++|.+|.+| +|+++.+++.+
T Consensus 174 l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~~l~ 253 (374)
T PRK02610 174 VVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHPELI 253 (374)
T ss_pred EeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhccCcccceeeeecCHHHH
Confidence 99999999999997666555431 48999999998632111 11111122377889999887666 99999887766
Q ss_pred ccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEE
Q 040741 276 IRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLN 355 (457)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 355 (457)
+++......+ ..+.....++..+++......+.+. +..+.++.+.+.|.+ ++++.+.. .. ..++.
T Consensus 254 ~~l~~~~~~~---------~~~~~~q~a~~~~l~~~~~~~~~~~-~~~~~r~~l~~~L~~-~~~~~~~p--~~--g~f~~ 318 (374)
T PRK02610 254 AVLEKVRLPY---------NLPSFSQLAAQLALEHRQELLAAIP-EILQERDRLYQALQE-LPQLRVWP--SA--ANFLY 318 (374)
T ss_pred HHHHHhcCCC---------CCCHHHHHHHHHHhcCHHHHHHHHH-HHHHHHHHHHHHHHh-CCCcEeCC--Cc--ceEEE
Confidence 6554433211 2344444444455543322233333 334446677788877 77766532 11 34445
Q ss_pred EEEcc-ccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 356 LSFAY-VEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 356 ~~~~~-~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
+.++. .+...+...+ +||.+..+ .+++||+++. .+++++++++|+++++.
T Consensus 319 ~~l~~~~~~~~~~~~l~~~gi~v~~~------------------------~~~lRls~~~---~~~~~~~l~~l~~~l~~ 371 (374)
T PRK02610 319 LRLSQDAALAALHQALKAQGTLVRHT------------------------GGGLRITIGT---PEENQRTLERLQAALTQ 371 (374)
T ss_pred EeCCCCCCHHHHHHHHHHCCEEEEeC------------------------CCeEEEeCCC---HHHHHHHHHHHHHHHhh
Confidence 55543 3456666665 58777532 1689999874 57889999999988754
Q ss_pred H
Q 040741 433 L 433 (457)
Q Consensus 433 ~ 433 (457)
+
T Consensus 372 ~ 372 (374)
T PRK02610 372 L 372 (374)
T ss_pred c
Confidence 3
No 164
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.94 E-value=2.7e-24 Score=216.25 Aligned_cols=343 Identities=14% Similarity=0.149 Sum_probs=233.5
Q ss_pred CCCCCCCCHHHHHHHHHHHhhccC--CCCCCccchhhhHHHHHHH-HHHHHHHHhCCCCCcEEE---eCChHHHHHHHHH
Q 040741 63 MQATTPVDPRVLDAMLPFYLSRYG--NPHSRTHLFGWESEVAVET-ARSQIADLIGASPKEIIF---TSGATESNNVSIK 136 (457)
Q Consensus 63 ~~~~~~~~~~v~~a~~~~~~~~~~--~p~~~~~~~~~~~~~~~~~-~~~~la~~~g~~~~~i~~---t~g~T~a~~~al~ 136 (457)
.++.+.+++.+++++...+.+.|+ .|.++.+. |....+.+++ ++++..++|+.+.+...+ ..+|+.||..++.
T Consensus 40 iasen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~-G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~ 118 (475)
T PLN03226 40 IASENFTSRAVMEALGSCLTNKYSEGLPGARYYG-GNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYT 118 (475)
T ss_pred ecCCccCCHHHHHHHhhHHhccccCCCCCCcCcC-CChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHH
Confidence 356778999999999999976664 55553332 3333333333 556788888987665544 4779999999999
Q ss_pred HhhhhhcCCCCEEEEcCC------CCcchHHHHHHHHhcCc--EEEEEeCC-CCCCCCHHHHHHhcC-CCceEEEEeccc
Q 040741 137 GVMHFYKDKKRHVITTQT------EHKCVLDSCRHLQQEGF--EITYLPVG-ADGIVNLDELRAAIR-PDTGLISVMAVN 206 (457)
Q Consensus 137 ~~~~~~~~~g~~vi~~~~------~h~~~~~~~~~~~~~G~--~v~~v~~~-~~~~~d~~~le~~i~-~~t~li~i~~~~ 206 (457)
+++ ++||.|+..+. .|.+....++.. ..+. ++..+.++ .+|.+|+++|++++. .++++|++. .
T Consensus 119 aL~----~pgD~Il~~d~~~gGhl~H~~~~~g~~~s-~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~~--~ 191 (475)
T PLN03226 119 ALL----QPHDRIMGLDLPHGGHLSHGYQTDGKKIS-ATSIYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIAG--A 191 (475)
T ss_pred HhC----CCCCEEEECCCCcCcchhhhhhhcccccc-cceEEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEEe--c
Confidence 999 89999998553 333322222211 1121 12233444 568899999999886 467766552 2
Q ss_pred cccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCC---CcccEEEeccccc-cCCCCceEEEEecCCCcccccc-
Q 040741 207 NEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEK---WNVSLMSLSGHKI-YGPKGVGALYMRRRPRIRVEPL- 281 (457)
Q Consensus 207 ~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~---~~~Di~~~s~~K~-~g~~G~G~l~~~~~~~~~~~~~- 281 (457)
+.+|...|+++|.++|+++|+++++|+||++|....+... .++|++++|+||+ .||.| |+++++++....+.+.
T Consensus 192 S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~hK~L~GP~G-g~I~~~~~~~~~~~~g~ 270 (475)
T PLN03226 192 SAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTHKSLRGPRG-GMIFFRKGPKPPKGQGE 270 (475)
T ss_pred CcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEEEecCcccccCCCc-eEEEEchhhcccccCCC
Confidence 3478999999999999999999999999999887654321 2689999999995 58998 8888887644222111
Q ss_pred --------ccCCccccccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccc
Q 040741 282 --------INGGGQERGIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIG 352 (457)
Q Consensus 282 --------~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 352 (457)
........ ...+++++..++++.++++++.. +++++.++..++++++++.|.+ .|+.++..... ..
T Consensus 271 ~~~~d~~~~i~~a~~~-~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~--~G~~l~~~~t~--~h 345 (475)
T PLN03226 271 GAVYDYEDKINFAVFP-GLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMS--KGYKLVTGGTD--NH 345 (475)
T ss_pred ccHHHHHHHhccccCC-ccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHh--CCCEEEcCCCC--CC
Confidence 00000001 13456888899999999999875 5788899999999999999999 68888864332 34
Q ss_pred eEEEEEc--cccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEe----cCCCCCHHHHHHHHH
Q 040741 353 NLNLSFA--YVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFG----IGRFTTEAEVDRAIE 424 (457)
Q Consensus 353 ~~~~~~~--~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~----~~~~~t~edid~~~~ 424 (457)
++.+.+. ++++.++...| .+|.+..+..... ........||++ .++.++++|++++++
T Consensus 346 i~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~--------------~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~ 411 (475)
T PLN03226 346 LVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGD--------------SSALVPGGVRIGTPAMTSRGLVEKDFEKVAE 411 (475)
T ss_pred EEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCC--------------cccCCCCCcccCcHHHHHCCCCHHHHHHHHH
Confidence 4445543 45565565555 5777765431100 012233678884 445567899999999
Q ss_pred HHHHHHHHH
Q 040741 425 LTVKQVEKL 433 (457)
Q Consensus 425 ~l~~~~~~~ 433 (457)
.|.++++..
T Consensus 412 ~i~~~~~~~ 420 (475)
T PLN03226 412 FLHRAVTIA 420 (475)
T ss_pred HHHHHHHHh
Confidence 999999854
No 165
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.94 E-value=5e-25 Score=216.16 Aligned_cols=309 Identities=14% Similarity=0.118 Sum_probs=216.8
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHH-HHHhcCcEE
Q 040741 95 FGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCR-HLQQEGFEI 173 (457)
Q Consensus 95 ~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~G~~v 173 (457)
|++...+....+|+.++++.+.+ ++++++||++|+..++.+++ ++||+|+++++.|.+....+. .+...|+++
T Consensus 55 Y~r~~npt~~~Le~~iA~le~~~--~~~~~~sG~~Ai~~~l~all----~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v 128 (394)
T PRK09028 55 YGRRGTPTHFAFQAAIVELEGGA--GTALYPSGAAAISNALLSFL----KAGDHLLMVDSCYEPTRDLCDKILKGFGIET 128 (394)
T ss_pred ecCCCCchHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHh----CCCCEEEEECCCcHHHHHHHHHhhhhcceEE
Confidence 34333456778999999998865 49999999999999999987 899999999999977776443 345568898
Q ss_pred EEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEE
Q 040741 174 TYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMS 253 (457)
Q Consensus 174 ~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~ 253 (457)
.+++.+ |.++++++++++|++|++++++||+|.+.|+++|+++||++|+++++|++++.+. .....++|+|+++
T Consensus 129 ~~v~~~-----~~e~l~~~l~~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~-~~~Pl~~GaDivv 202 (394)
T PRK09028 129 TYYDPM-----IGEGIRELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPI-NSRPFEMGVDISI 202 (394)
T ss_pred EEECCC-----CHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCccccc-cCCccccCceEEE
Confidence 887644 5688999999999999999999999999999999999999999999999999874 3444567899999
Q ss_pred ecccccc-CCCC--ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 040741 254 LSGHKIY-GPKG--VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLL 330 (457)
Q Consensus 254 ~s~~K~~-g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~ 330 (457)
.|.+|++ |+.+ .|+++.+++..+++..... ....+.++..+.-+...+ ..+.-++++..+++..+.
T Consensus 203 ~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~-------~~G~~~~p~~a~l~~rgl----~TL~lR~~~~~~na~~la 271 (394)
T PRK09028 203 QAATKYIVGHSDVMLGTATANEKHWDQLREHSY-------LMGQCTSPDDVYLAMRGL----RTLGVRLAQHEKNALKVA 271 (394)
T ss_pred EeCCeEecCCCCEEEEEEECCHHHHHHHHHHHH-------hcCCCCCHHHHHHHHccc----CcHHHHHHHHHHHHHHHH
Confidence 9999965 4432 5666555433333322211 111244444444332222 247888899999999999
Q ss_pred HHHhhcCCCeE-EeCC--CC-----------CcccceEEEEEccc---cchHHHhccc--CeEecccCccCCC----CCC
Q 040741 331 NGIKEKLDGVV-VNGS--ME-----------RRYIGNLNLSFAYV---EGESLLMGLK--EVAVSSGSACTSA----SLE 387 (457)
Q Consensus 331 ~~l~~~~~~~~-~~~~--~~-----------~~~~~~~~~~~~~~---~~~~~~~~l~--~i~~~~g~~~~~~----~~~ 387 (457)
+.|++ .|.+. ++-+ +. ...++++.|.+++- ....++..|+ .++++-|...+.. +..
T Consensus 272 ~~L~~-~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~ 350 (394)
T PRK09028 272 NWLAT-RPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAVTALVEGMQHFKMGFSWGGFESLILGVFGIN 350 (394)
T ss_pred HHHhc-CCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEecccCCCcceeECCCCcC
Confidence 99999 77763 3221 11 13577888888621 2245666664 5556666543321 111
Q ss_pred hhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHh
Q 040741 388 PSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLRE 435 (457)
Q Consensus 388 ~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~ 435 (457)
.....+..|+. ++.|||+++. ||.|.+++.|+++++..+.
T Consensus 351 ~~~~~~~~~~~----~~liR~svGl----Ed~~dLi~Dl~~Al~~~~~ 390 (394)
T PRK09028 351 KLRTATNWDFS----KPLIRLHIGL----EDVDDLIADLEAGFERYNA 390 (394)
T ss_pred ccCchhhhcCC----CCeEEEEeCc----CCHHHHHHHHHHHHHHHHH
Confidence 00011223333 3799999997 7888889999988887653
No 166
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.94 E-value=2.1e-25 Score=220.73 Aligned_cols=306 Identities=15% Similarity=0.145 Sum_probs=207.1
Q ss_pred chhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHH-HHHhcCcE
Q 040741 94 LFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCR-HLQQEGFE 172 (457)
Q Consensus 94 ~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~G~~ 172 (457)
.|+....+...++++.++++.|.+. .+++++|+.|+.+++. +. ++||+|+++.+.|++....+. .++..|++
T Consensus 47 ~y~r~~~p~~~~le~~lA~l~g~~~--~v~~~sG~~ai~~~l~-~l----~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~ 119 (390)
T PRK08064 47 DYSRSGNPTREALEDIIAELEGGTK--GFAFASGMAAISTAFL-LL----SKGDHVLISEDVYGGTYRMITEVLSRFGIE 119 (390)
T ss_pred cccCCCChhHHHHHHHHHHHhCCCC--eEEECCHHHHHHHHHH-Hh----CCCCEEEEccCccchHHHHHHHHHHHcCCE
Confidence 3444555788999999999999874 5566778889887775 55 789999999999997765543 44667999
Q ss_pred EEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEE
Q 040741 173 ITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLM 252 (457)
Q Consensus 173 v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~ 252 (457)
+++++.. |+++++++++++|++|++++++||+|.+.|+++|.++|+++|+++++|++++.+...... ++++|++
T Consensus 120 v~~v~~~-----d~~~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~~-~~g~Div 193 (390)
T PRK08064 120 HTFVDMT-----NLEEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQKPL-DLGADVV 193 (390)
T ss_pred EEEECCC-----CHHHHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccCch-hhCCcEE
Confidence 9999875 799999999999999999999999999999999999999999999999999876542222 4578999
Q ss_pred Eecccccc-CCCC--ceEEEEec-CCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 040741 253 SLSGHKIY-GPKG--VGALYMRR-RPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDR 328 (457)
Q Consensus 253 ~~s~~K~~-g~~G--~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~ 328 (457)
+.|+||++ |+.| .|++++++ +..+++.+....++. ..++..... ++. ....+..++++..+++..
T Consensus 194 v~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~-------~~~~~~a~l---~~~-gl~tl~~R~~~~~~~a~~ 262 (390)
T PRK08064 194 LHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGA-------VLGVQDCWL---VLR-GLKTLHVRLEHSSETANK 262 (390)
T ss_pred EeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCC-------CCCHHHHHH---HHc-ccCcHHHHHHHHHHHHHH
Confidence 99999965 5655 48888764 344555544433221 222222221 111 112366788888888888
Q ss_pred HHHHHhhcCCCe-EEeCC-------------CCCcccceEEEEEcccc-chHHHhccc--CeEecccCccC----CCCCC
Q 040741 329 LLNGIKEKLDGV-VVNGS-------------MERRYIGNLNLSFAYVE-GESLLMGLK--EVAVSSGSACT----SASLE 387 (457)
Q Consensus 329 l~~~l~~~~~~~-~~~~~-------------~~~~~~~~~~~~~~~~~-~~~~~~~l~--~i~~~~g~~~~----~~~~~ 387 (457)
+.+.|++ .|.+ +++-+ .....++++.|.+.+.+ ...+++.++ .++++.|...+ +..+.
T Consensus 263 la~~L~~-~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~ 341 (390)
T PRK08064 263 IALYLQE-HPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQSEEAVRQFVSHVKLPVFAVSLGAVESILSYPAKMS 341 (390)
T ss_pred HHHHHhc-CCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCCcceEcccCCCCcceeECCcccc
Confidence 9898888 6654 22211 11235677777775422 223444442 34677775433 11111
Q ss_pred ----hhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHH
Q 040741 388 ----PSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVK 428 (457)
Q Consensus 388 ----~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~ 428 (457)
+.......|+.+ +.||+|++...+++.|+.+.++|++
T Consensus 342 h~~~~~~~~~~~gi~~----~liR~SvGle~~~dli~dl~~Al~~ 382 (390)
T PRK08064 342 HAAMPKEERDERGITD----GLLRLSVGLENVDDLIADFEQALSY 382 (390)
T ss_pred cccCCHHHHHhcCCCC----CeEEEEeccCCHHHHHHHHHHHHHh
Confidence 122233455543 8999999985555555554444443
No 167
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.94 E-value=1.8e-24 Score=195.44 Aligned_cols=354 Identities=19% Similarity=0.227 Sum_probs=268.1
Q ss_pred eecccccCCCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccch-hhhHHHHHHHHHHHHHHHhCCCCCcEEEeCC
Q 040741 48 TLKGVRIAGRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLF-GWESEVAVETARSQIADLIGASPKEIIFTSG 126 (457)
Q Consensus 48 ~~~~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g 126 (457)
.++.+...++.|||+-++-+..|..+.....+.....|+.-.-+.+.. ...+.+.-+.+-.+++-++|+.+.+++.+.+
T Consensus 22 lr~~f~lp~~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~Evvv~dt 101 (407)
T COG3844 22 LRDRFALPGGVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGEVVVTDT 101 (407)
T ss_pred hHhhccCCCCeEEeeccccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCCceEEeCC
Confidence 445566778999999999998886666666665555454333223321 1234467778899999999999999999998
Q ss_pred hHHHHHHHHHHhhhhhcCCCCEEEEcCC-CCcchHHHHHHH-HhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEec
Q 040741 127 ATESNNVSIKGVMHFYKDKKRHVITTQT-EHKCVLDSCRHL-QQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMA 204 (457)
Q Consensus 127 ~T~a~~~al~~~~~~~~~~g~~vi~~~~-~h~~~~~~~~~~-~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~ 204 (457)
.+--++-.+.+.... .+|+.||+++. ++++-...+.-+ ...|.. .+-.+.+.+.++++++++++.+|++++
T Consensus 102 ts~nl~k~L~aalr~--~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~-----~~~~~~~~P~~~~~~~~dd~AvV~L~~ 174 (407)
T COG3844 102 TSINLFKVLAAALRP--QEGRRVIVSEGDNFPTDLYIAEGLADLLGIG-----YDLEGVIAPRALEEAITDDVAVVLLSH 174 (407)
T ss_pred cchHHHHHHHHHhcc--CCCceEEeecCCCCCcchhhhcchhhhhccc-----ccceeeeChHHHHHhhccceEEEEecc
Confidence 887776666655532 45788877664 455555443321 111221 223344577899999999999999999
Q ss_pred cccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccc--cCCCCceEEEEecCCCccccccc
Q 040741 205 VNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKI--YGPKGVGALYMRRRPRIRVEPLI 282 (457)
Q Consensus 205 ~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~--~g~~G~G~l~~~~~~~~~~~~~~ 282 (457)
+++.||...++.+|-.+++++|+++..|-||+.|.+|.++...++|+-+.|.+|+ .||.+.+++++.++..++..+..
T Consensus 175 V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~l 254 (407)
T COG3844 175 VNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPL 254 (407)
T ss_pred ccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeecccCCCeeeeeeceeccCCCCCceeEEecccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999994 46777999999999888877777
Q ss_pred cCCcc----------------ccccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCC--CeEEe
Q 040741 283 NGGGQ----------------ERGIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLD--GVVVN 343 (457)
Q Consensus 283 ~~~~~----------------~~~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~ 343 (457)
.||.. .++|..|++++..++++..+++.+.+ .+.+.+++...+.+++.+.++..-+ ++++.
T Consensus 255 sgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~ 334 (407)
T COG3844 255 SGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLV 334 (407)
T ss_pred ccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEe
Confidence 66532 24667889999999999999998876 5899999999999999999887433 67777
Q ss_pred CCCC-CcccceEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCC-CCCHHHH
Q 040741 344 GSME-RRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGR-FTTEAEV 419 (457)
Q Consensus 344 ~~~~-~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~-~~t~edi 419 (457)
.+.+ ..++.-+ ++....+.++++.| +||... ....+.|||+++. |++.+||
T Consensus 335 tPr~~~~rGsqv--S~~hp~~~~V~qaLi~rGVigD-----------------------~R~P~vlRfgftPlY~~~~DV 389 (407)
T COG3844 335 TPRAHEERGSQV--SLYHPHGYQVMQALIDRGVIGD-----------------------FREPDVLRFGFTPLYVSFVDV 389 (407)
T ss_pred ccchhhhcccee--eEecCcHHHHHHHHHHcCcccc-----------------------ccCCCeeeecCccceechhHH
Confidence 6643 2334444 44445678888887 565431 1223899999976 6899999
Q ss_pred HHHHHHHHHHHHHH
Q 040741 420 DRAIELTVKQVEKL 433 (457)
Q Consensus 420 d~~~~~l~~~~~~~ 433 (457)
=..++.|.++++.+
T Consensus 390 w~AV~~L~evL~t~ 403 (407)
T COG3844 390 WDAVDALEEVLDTL 403 (407)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998765
No 168
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.94 E-value=6.5e-25 Score=216.70 Aligned_cols=285 Identities=20% Similarity=0.260 Sum_probs=213.4
Q ss_pred HHHHHHHHHHHHHhC------CCCC-cEEEeCChHHHHHHHHHHh-hhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcE
Q 040741 101 VAVETARSQIADLIG------ASPK-EIIFTSGATESNNVSIKGV-MHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFE 172 (457)
Q Consensus 101 ~~~~~~~~~la~~~g------~~~~-~i~~t~g~T~a~~~al~~~-~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~ 172 (457)
....++++.++++++ .+++ ++++++|+.+++..++..+ . ++++.|+++.+.|+.+...++.. |.+
T Consensus 44 ~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~----~~~~~vlv~~P~y~~~~~~~~~~---g~~ 116 (363)
T PF00155_consen 44 QGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKI----NPGDTVLVPDPCYPSYIEAARLL---GAE 116 (363)
T ss_dssp THHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHS----STTSEEEEEESSSTHHHHHHHHT---TSE
T ss_pred hhhHHHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhcccc----cccccceecCCcccccccccccc---Cce
Confidence 467889999999998 6677 7999998888888877777 4 78999999999999999888777 999
Q ss_pred EEEEeCC--CCCCCCHHHHHHhcCC------CceEEEEeccccccccccChHH---HHHHHHhcCCcEEEehhhhcCCCc
Q 040741 173 ITYLPVG--ADGIVNLDELRAAIRP------DTGLISVMAVNNEIGVIQPMEE---IGQICKEFKIPFHTDAAQALGKIP 241 (457)
Q Consensus 173 v~~v~~~--~~~~~d~~~le~~i~~------~t~li~i~~~~~~~G~~~~l~~---i~~l~~~~~v~li~D~a~~~g~~~ 241 (457)
++.++.+ .++.+|++++++.+++ ++++|++++++||||...+.++ |+++|++||+++++|++|+.....
T Consensus 117 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~ 196 (363)
T PF00155_consen 117 VIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFG 196 (363)
T ss_dssp EEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSS
T ss_pred eeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccC
Confidence 9998864 6778999999999987 6789999999999999998555 555599999999999999854332
Q ss_pred --------ccCCCCcccEEEeccccccCCCC--ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHH
Q 040741 242 --------VDVEKWNVSLMSLSGHKIYGPKG--VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIA 311 (457)
Q Consensus 242 --------~~~~~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~ 311 (457)
..+......+++.|++|.+|.+| +|+++++++.++.+......+ ..+.....++..++...
T Consensus 197 ~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~~~~l~~~~~~~---------~~~~~~~~~~~~~l~~~ 267 (363)
T PF00155_consen 197 DPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPPELIERLRRFQRSG---------LSSSPMQAAAAAALSDP 267 (363)
T ss_dssp SSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEHHHHHHHHHHHHHT---------TSSHHHHHHHHHHHHHH
T ss_pred CCccCcccccccccccceeeeeccccccccccccccccchhhhhhhhhhccccc---------cccchhhHHHHHhhhcc
Confidence 11222222588999999888666 899999876655555433221 22444444444444333
Q ss_pred H---HhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHHhcc--c-CeEecccCccCCCC
Q 040741 312 K---KEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGL--K-EVAVSSGSACTSAS 385 (457)
Q Consensus 312 ~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~-~i~~~~g~~~~~~~ 385 (457)
. +.+++..++++++++++.+.|++ . ++.+..++. +.++...+...+..++.+.| + ||.+.+|..+..
T Consensus 268 ~~~~~~~~~~~~~l~~~~~~l~~~L~~-~-~~~~~~~~~---~~~~~~~~~~~~~~~l~~~L~~~~gi~v~pg~~~~~-- 340 (363)
T PF00155_consen 268 ELVEKWLEELRERLRENRDLLREALEE-I-GITVLPPEA---GFFLWVRLDPNDAEELAQELLEEYGILVRPGSYFGV-- 340 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-T-TSEEEHHSB---SSEEEEEESHHHHHHHHHHHHHHHTEEEEEGGGGTS--
T ss_pred cccccccccchhhHHHHHHHHHHHHHH-h-hhheeeccC---ccEEEEEcccchHHHHHHHHHHhCCEEEEecCCCCC--
Confidence 3 26788999999999999999999 5 888776432 33333444433456777766 4 999999875432
Q ss_pred CChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHH
Q 040741 386 LEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELT 426 (457)
Q Consensus 386 ~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l 426 (457)
.++|||++ ...++|++++++++|
T Consensus 341 -----------------~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 341 -----------------PGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp -----------------TTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred -----------------CCEEEEEe-ccCCHHHHHHHHhhC
Confidence 38999999 567899999999876
No 169
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=6.9e-25 Score=215.41 Aligned_cols=280 Identities=17% Similarity=0.170 Sum_probs=201.6
Q ss_pred HHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCC-CEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCC
Q 040741 103 VETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKK-RHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGAD 181 (457)
Q Consensus 103 ~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g-~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~ 181 (457)
..++++.+++++|+++++|++|+|+++++.+++.++. ++| ++|++..+.|..+...++.. |.+++.++.+.+
T Consensus 62 ~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~----~~g~d~vlv~~P~y~~y~~~~~~~---g~~v~~v~~~~~ 134 (354)
T PRK04635 62 PPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFC----EPGQDSIACFGPTYGMYAISAETF---NVGVKALPLTAD 134 (354)
T ss_pred HHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhc----CCCCCeEEEcCCChHHHHHHHHHc---CCEEEEEecCCC
Confidence 4678999999999999999999999999999999988 777 89999999998777655554 999999999877
Q ss_pred CCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhc-CCcEEEehhhhcCCCcc---cC-CCCcccEEEecc
Q 040741 182 GIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEF-KIPFHTDAAQALGKIPV---DV-EKWNVSLMSLSG 256 (457)
Q Consensus 182 ~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~-~v~li~D~a~~~g~~~~---~~-~~~~~Di~~~s~ 256 (457)
+.+|++.+++ + +++++|++++++||||.+.+.+++.++++.. +++|++|++|.-..... +. .....-+++.|+
T Consensus 135 ~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~ 212 (354)
T PRK04635 135 YQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTL 212 (354)
T ss_pred CCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCEEEEech
Confidence 7889998874 4 6899999999999999999999999998764 79999999986332111 11 111223678899
Q ss_pred ccccCCCC--ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHH
Q 040741 257 HKIYGPKG--VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIA-KKEMDYDHKRITALHDRLLNGI 333 (457)
Q Consensus 257 ~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~-~~~~~~~~~~~~~~~~~l~~~l 333 (457)
||.+|.+| +|+++++++.++.+......+ ..+.+...++.+++... .+.+.+..+++++.++++.+.|
T Consensus 213 SK~~~l~GlRlG~~i~~~~~~~~l~~~~~~~---------~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L 283 (354)
T PRK04635 213 SKAFALAGARCGFTLANEELIEILMRVIAPY---------PVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAAL 283 (354)
T ss_pred HHHhhhhHHHHhhhhCCHHHHHHHHhhcCCC---------CCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888666 899999887666554432211 23333333333333211 1234556667788889999999
Q ss_pred hhcCCCeEEeCCCCCcccceEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecC
Q 040741 334 KEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIG 411 (457)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~ 411 (457)
++ ++++.+..+ . .+++.+.++ +...+...+ +||.++.+. . ....+++||+++
T Consensus 284 ~~-~~~~~~~~~-~---g~f~~~~~~--~~~~~~~~l~~~gv~v~~~~---~----------------~~~~~~lRis~~ 337 (354)
T PRK04635 284 SM-YGGAKVLEG-N---GNYVLAKFD--DVDAVFKALWDAGIVARAYK---D----------------PRLANCIRFSFS 337 (354)
T ss_pred Hh-CCCceECCC-C---CcEEEEECC--CHHHHHHHHHHCCEEEEECC---C----------------CCCCCeEEEEeC
Confidence 98 766666543 2 334444444 345555555 688886431 0 011379999986
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 040741 412 RFTTEAEVDRAIELTVKQ 429 (457)
Q Consensus 412 ~~~t~edid~~~~~l~~~ 429 (457)
+.+|+++++++|++.
T Consensus 338 ---~~e~~~~l~~al~~~ 352 (354)
T PRK04635 338 ---NRAETDKLIGLIRNQ 352 (354)
T ss_pred ---CHHHHHHHHHHHHHh
Confidence 589999999999753
No 170
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.94 E-value=7.7e-25 Score=217.36 Aligned_cols=309 Identities=15% Similarity=0.163 Sum_probs=219.6
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHH-HHHhcCcEE
Q 040741 95 FGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCR-HLQQEGFEI 173 (457)
Q Consensus 95 ~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~G~~v 173 (457)
|++...+...++++.++++.|.+ ++++++||+.|+.+++.++. ++|++|+++.+.|++...... .+...|+++
T Consensus 58 Y~r~~~p~~~~Le~~iA~~~g~~--~~l~~~sG~~Ai~~al~~ll----~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v 131 (400)
T PRK06234 58 YSRLGNPTSTEVENKLALLEGGE--AAVVAASGMGAISSSLWSAL----KAGDHVVASDTLYGCTFALLNHGLTRYGVEV 131 (400)
T ss_pred ccCCCCccHHHHHHHHHHHhCCC--cEEEEcCHHHHHHHHHHHHh----CCCCEEEEecCccchHHHHHHHHHhhCCeEE
Confidence 34334467889999999999975 48999999999999998887 899999999999988776543 345669999
Q ss_pred EEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhc--CCcEEEehhhhcCCCcccCCCCcccE
Q 040741 174 TYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEF--KIPFHTDAAQALGKIPVDVEKWNVSL 251 (457)
Q Consensus 174 ~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~--~v~li~D~a~~~g~~~~~~~~~~~Di 251 (457)
++++.. |+++++++++++|++|++++++||+|.+.|+++|.++|+++ |+++++|++++.+...... ..+.|+
T Consensus 132 ~~vd~~-----d~e~l~~~i~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~~l-~~g~Di 205 (400)
T PRK06234 132 TFVDTS-----NLEEVRNALKANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQRPL-QLGADV 205 (400)
T ss_pred EEECCC-----CHHHHHHHhccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCCch-hhCCcE
Confidence 999865 89999999999999999999999999999999999999997 9999999999876543222 347899
Q ss_pred EEeccccccCCCC---ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 040741 252 MSLSGHKIYGPKG---VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDR 328 (457)
Q Consensus 252 ~~~s~~K~~g~~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~ 328 (457)
++.|++|++++.| .|+++++++..++++..... .......++.....+...+ +.++.++++..+++.+
T Consensus 206 vv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~-----~~~g~~l~p~~a~l~~~~l----~tl~~r~~~~~~na~~ 276 (400)
T PRK06234 206 VVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIK-----DMTGSVIGPFEAFLIIRGM----KTLQIRMEKHCKNAMK 276 (400)
T ss_pred EEeeccccccCCCCceeEEEEecHHHHHHHHHHHHH-----HhcCCCCCHHHHHHHHhcc----CcHHHHHHHHHHHHHH
Confidence 9999999776544 59999887654444321100 0111233333333222222 2456777788889999
Q ss_pred HHHHHhhcCCCeEEeCCCC--------------CcccceEEEEEccc--cchHHHhcc--cCeEecccCccCCC----CC
Q 040741 329 LLNGIKEKLDGVVVNGSME--------------RRYIGNLNLSFAYV--EGESLLMGL--KEVAVSSGSACTSA----SL 386 (457)
Q Consensus 329 l~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~--~~~~~~~~l--~~i~~~~g~~~~~~----~~ 386 (457)
+.+.|++ .|.+.-+-.+. ...++++.|.+++- ....+...| .+++.+-|...+.. ..
T Consensus 277 ~a~~L~~-~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~ 355 (400)
T PRK06234 277 VAKFLES-HPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNVKLATLAVSLGDAETLIQHPASM 355 (400)
T ss_pred HHHHHHc-CCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhCCcceEeccCCCCCceecCCccC
Confidence 9999998 67663221111 13467777777531 124566666 36666667654322 11
Q ss_pred Ch----hHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 387 EP----SYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 387 ~~----~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
.+ .-.....|+.+ +.|||+++. ||.+.+++.|+++++.+
T Consensus 356 ~~~~~~~~~~~~~gi~~----~l~R~svGl----E~~~dl~~dl~~al~~~ 398 (400)
T PRK06234 356 THSPYTAEERKEAGISD----GLVRLSVGL----EDVDDIIADLKQALDLI 398 (400)
T ss_pred CCCCCCHHHHHhcCCCC----CeEEEEeCC----CCHHHHHHHHHHHHHHH
Confidence 11 11234566654 899999997 78888888888888754
No 171
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=3.4e-24 Score=210.32 Aligned_cols=315 Identities=16% Similarity=0.137 Sum_probs=222.0
Q ss_pred cEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHH
Q 040741 58 PLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIK 136 (457)
Q Consensus 58 ~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~ 136 (457)
.+.|+.+.+. .+++.+.+++.+.+.....+|. ....++|+.++++++++++++++|+|+++++.+++.
T Consensus 21 ~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~Y~~-----------~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~ 89 (354)
T PRK06358 21 ILDFSANINPLGVPESLKQAITENLDKLVEYPD-----------PDYLELRKRIASFEQLDLENVILGNGATELIFNIVK 89 (354)
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHHHhhhcCCC-----------ccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHH
Confidence 4566665444 5688999999887654322221 235789999999999999999999999999999888
Q ss_pred HhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCC--CCCCHHHHHHhcCCCceEEEEeccccccccccC
Q 040741 137 GVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGAD--GIVNLDELRAAIRPDTGLISVMAVNNEIGVIQP 214 (457)
Q Consensus 137 ~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~--~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~ 214 (457)
++. + +.|++..+.|+.+...++.. |.+++.++.+.+ ..+| +++++.+..+++++++++++||||.+.+
T Consensus 90 ~~~-----~-~~v~i~~P~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~ 159 (354)
T PRK06358 90 VTK-----P-KKVLILAPTFAEYERALKAF---DAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLIS 159 (354)
T ss_pred HhC-----C-CcEEEecCChHHHHHHHHHc---CCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccC
Confidence 742 3 47889999998887766555 999999998643 3678 6666677778999999999999999998
Q ss_pred ---hHHHHHHHHhcCCcEEEehhhhcCCC---c---c-cCCCCcccEEEeccccccCCCC--ceEEEEec-CCCcccccc
Q 040741 215 ---MEEIGQICKEFKIPFHTDAAQALGKI---P---V-DVEKWNVSLMSLSGHKIYGPKG--VGALYMRR-RPRIRVEPL 281 (457)
Q Consensus 215 ---l~~i~~l~~~~~v~li~D~a~~~g~~---~---~-~~~~~~~Di~~~s~~K~~g~~G--~G~l~~~~-~~~~~~~~~ 281 (457)
+++|.++|++|++++++|+++.--.. + + .....+.-+++.|++|.+|.+| +||+++.+ ...+++...
T Consensus 160 ~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~ 239 (354)
T PRK06358 160 KEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQM 239 (354)
T ss_pred HHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHh
Confidence 77888899999999999999863211 0 1 1112223478899999888555 99998853 444444332
Q ss_pred ccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccc
Q 040741 282 INGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYV 361 (457)
Q Consensus 282 ~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (457)
.. ..+.+.....++..+++. ...+++..+.+++.++++.+.|++ ++++.+..+ . ++++.+.++
T Consensus 240 ~~---------~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~~~-~---g~f~~~~~~-- 302 (354)
T PRK06358 240 RE---------PWSINTFADLAGQTLLDD-KEYIKKTIQWIKEEKDFLYNGLSE-FKGIKVYKP-S---VNFIFFKLE-- 302 (354)
T ss_pred CC---------CCcchHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHhc-CCCcEEcCC-c---ceEEEEEcC--
Confidence 21 123444444444444431 123567778888899999999988 777766543 2 344444443
Q ss_pred cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHH
Q 040741 362 EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 362 ~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~ 430 (457)
+...+...+ +||.+.+|..+.. ...++|||+++ ++++.++++++|++++
T Consensus 303 ~~~~~~~~l~~~gI~v~~~~~f~~-----------------~~~~~iRls~~---~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 303 KPIDLRKELLKKGILIRSCSNYRG-----------------LDENYYRVAVK---SREDNKKLLKALEVIL 353 (354)
T ss_pred chHHHHHHHHHCCeEEEECCCCCC-----------------CCCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 345666655 7999998865411 12378999998 4899999999998765
No 172
>PRK06460 hypothetical protein; Provisional
Probab=99.94 E-value=1e-24 Score=214.67 Aligned_cols=309 Identities=14% Similarity=0.118 Sum_probs=210.6
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHH-HHHHHhcCc
Q 040741 93 HLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDS-CRHLQQEGF 171 (457)
Q Consensus 93 ~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~-~~~~~~~G~ 171 (457)
+.|+....+...++++.++++.|.++ .+..++|++|+..++.++. ++||+|+++.+.|...... ...++..|.
T Consensus 37 ~~y~r~~~p~~~~L~~~lA~l~g~~~--~v~~~sG~~ai~~~l~al~----~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~ 110 (376)
T PRK06460 37 YRYSREANPTVLELTKKIVELENAEM--GVAFSSGMGAISTTALALL----KPGNSVLVHRDMFGRSYRFFTDYLKNWGV 110 (376)
T ss_pred cceeCCCCccHHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHHh----CCCCEEEEecCCcCcHHHHHHHHHHhhCc
Confidence 45566666889999999999999865 3444667899999999887 8999999988776544332 234455699
Q ss_pred EEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccE
Q 040741 172 EITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSL 251 (457)
Q Consensus 172 ~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di 251 (457)
+++.++.+ +.+.+++++++++++|++++++||+|.+.|+++|.++|+++|+++++|++++.+.. ......+.|+
T Consensus 111 ~v~~~~~~-----~~~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~-~~~l~~~~di 184 (376)
T PRK06460 111 NVDASNPG-----SDNIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPIN-QKPLELGADI 184 (376)
T ss_pred EEEEECCC-----CHHHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCcccc-CChhhcCCCE
Confidence 99888765 33456666778999999999999999999999999999999999999999986522 1112346899
Q ss_pred EEeccccccCCCC---ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 040741 252 MSLSGHKIYGPKG---VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDR 328 (457)
Q Consensus 252 ~~~s~~K~~g~~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~ 328 (457)
++.|++|++++.+ +|+++.+++.++++.......+ .+.++..... +++ ..+.++.++++..+++++
T Consensus 185 vv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g-------~~~~~~~a~~---~l~-~~~~l~~r~~~~~~n~~~ 253 (376)
T PRK06460 185 VVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLG-------TSLDPHAAYL---TLR-GIKTLKIRMDVINRNAEQ 253 (376)
T ss_pred EEeecceeccCCCCceEEEEecCHHHHHHHHHHHHhcC-------CCCCHHHHHH---HHh-chhhHHHHHHHHHHHHHH
Confidence 9999999765432 7888887766555543332111 1222222111 111 123467788889999999
Q ss_pred HHHHHhhcCCCeE-EeCC--CC-----------CcccceEEEEEccc--cchHHHhccc--CeEecccCccC----CCCC
Q 040741 329 LLNGIKEKLDGVV-VNGS--ME-----------RRYIGNLNLSFAYV--EGESLLMGLK--EVAVSSGSACT----SASL 386 (457)
Q Consensus 329 l~~~l~~~~~~~~-~~~~--~~-----------~~~~~~~~~~~~~~--~~~~~~~~l~--~i~~~~g~~~~----~~~~ 386 (457)
+.+.|++ .|.+. ++-+ +. ...++++.|.+.+- ....++..|+ .++++-|...+ +...
T Consensus 254 l~~~L~~-~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~~~~~~~~~~l~~~~~~~s~Gg~~sl~~~p~~~ 332 (376)
T PRK06460 254 IAEFLEG-HPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQESALKVMKSLKLIIPAQTLGGVNSVISHPATM 332 (376)
T ss_pred HHHHHHc-CCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcHHHHHHHHHhCCcceeccCCCCCceEEeCcccc
Confidence 9999998 67763 2221 11 23577887887531 2345555553 34444453322 2111
Q ss_pred Ch----hHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 387 EP----SYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 387 ~~----~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
.+ .-.....|+.+ +.|||+++. ||.|.+++.|+++++.+
T Consensus 333 ~~~~~~~~~~~~~gi~~----~liR~svGl----E~~~dl~~dl~~al~~~ 375 (376)
T PRK06460 333 SHRTLSLEERKIVGITD----SLLRLSVGI----EDVNDLIEDLDRALSTL 375 (376)
T ss_pred ccccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHHhh
Confidence 11 12233456654 899999996 78999999999988754
No 173
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.94 E-value=1.4e-24 Score=216.17 Aligned_cols=316 Identities=15% Similarity=0.170 Sum_probs=214.7
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHH-HHHHhcCc
Q 040741 93 HLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSC-RHLQQEGF 171 (457)
Q Consensus 93 ~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~-~~~~~~G~ 171 (457)
+.|+....+....+++.++++.|.+ ..+++++|+.|+.+++.++. ++||+||++...|.+....+ ..++..|+
T Consensus 61 ~~Y~r~~~pt~~~le~~la~l~g~~--~~v~fsSG~~Ai~~al~~ll----~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi 134 (437)
T PRK05613 61 PIYSRLTNPTVEALENRIASLEGGV--HAVAFASGQAAETAAILNLA----GAGDHIVTSPRLYGGTETLFLVTLNRLGI 134 (437)
T ss_pred ceeeCccChHHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHhc----CCCCEEEECCCccHHHHHHHHHHHHhcCe
Confidence 3445555578999999999999985 36666777799999898887 89999999999999885433 34566799
Q ss_pred EEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccE
Q 040741 172 EITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSL 251 (457)
Q Consensus 172 ~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di 251 (457)
++++++ +. .|+++++++++++|++|+++++.|++|.+.|+++|+++|+++|+++++|++++.|.. ....++++|+
T Consensus 135 ~v~~vd-~~---~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~-~~p~~~GaDi 209 (437)
T PRK05613 135 EVTFVE-NP---DDPESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAAL-VRPLELGADV 209 (437)
T ss_pred EEEEEC-CC---CCHHHHHHhCCccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccc-cChHHhCCCE
Confidence 999998 32 289999999999999999999999999999999999999999999999999988765 3444668999
Q ss_pred EEeccccccCCCC--ceEEEE-ecCCCcc-------ccccccC------------Ccc----------ccccccCCCChh
Q 040741 252 MSLSGHKIYGPKG--VGALYM-RRRPRIR-------VEPLING------------GGQ----------ERGIRSGTLPTP 299 (457)
Q Consensus 252 ~~~s~~K~~g~~G--~G~l~~-~~~~~~~-------~~~~~~~------------~~~----------~~~~~~~t~~~~ 299 (457)
+++|+||++|+.| +|.+++ +++.... +.+.... .+. ......++.++.
T Consensus 210 vv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~ 289 (437)
T PRK05613 210 VVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPF 289 (437)
T ss_pred EEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCCCCCHH
Confidence 9999999877654 344444 3321100 0000000 000 000001122222
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeE-EeCC--CC------------CcccceEEEEEcc--cc
Q 040741 300 LIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVV-VNGS--ME------------RRYIGNLNLSFAY--VE 362 (457)
Q Consensus 300 ~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~--~~------------~~~~~~~~~~~~~--~~ 362 (457)
.+.-+... .+.+.-++++..+++.++.+.|++ .|.+. ++-+ +. ...++++.|.+.+ ..
T Consensus 290 ~a~l~~rg----l~TL~lR~~~~~~nA~~lA~~L~~-hp~V~~V~yPgl~~~p~~~~~~~~~~~g~gg~~sf~l~~~~~~ 364 (437)
T PRK05613 290 NAWVTAQG----LDTLSLRLERHNENAIKVAEFLNN-HEKVAKVNFAGLKDSPWYATKEKLGLKYTGSVLSFDIKGGKDE 364 (437)
T ss_pred HHHHHHcc----cCcHHHHHHHHHHHHHHHHHHHHc-CCCcceEECCCCCCCccHHHHHHhcCCCCceEEEEEecCCHHH
Confidence 22211111 124788889999999999999999 88763 2221 11 1246677777753 11
Q ss_pred chHHHhccc--CeEecccCcc----CCCCCCh----hHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 363 GESLLMGLK--EVAVSSGSAC----TSASLEP----SYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 363 ~~~~~~~l~--~i~~~~g~~~----~~~~~~~----~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
...++..|+ .++..-|... .+....+ .-..+..|+.+ +.|||+++. ||+|.+++.|++++++
T Consensus 365 ~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~~----~liRlsvGl----E~~~dLi~Dl~~Al~~ 436 (437)
T PRK05613 365 AWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGITQ----ATVRLSVGI----EDIDDIIADLEGGFAA 436 (437)
T ss_pred HHHHHHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 335566663 4444445432 2332222 22345677765 899999996 7888899999988864
No 174
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=1.9e-24 Score=214.24 Aligned_cols=308 Identities=11% Similarity=0.068 Sum_probs=215.2
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHH-HHhcCcEE
Q 040741 95 FGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRH-LQQEGFEI 173 (457)
Q Consensus 95 ~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~-~~~~G~~v 173 (457)
|+....+...++++.++++.|.+. .+++++|++|+.+++.++. ++||+|++..+.|.+.....+. +...|.++
T Consensus 54 y~R~~~p~~~~Le~~lA~l~g~~~--~v~~~sG~~Ai~~~l~all----~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v 127 (405)
T PRK08776 54 YTRSGNPTRDLLGEALAELEGGAG--GVITATGMGAINLVLNALL----QPGDTLVVPHDAYGGSWRLFNALAKKGHFAL 127 (405)
T ss_pred ccCCCChHHHHHHHHHHHHhCCCc--eEEEcCHHHHHHHHHHHHh----CCCCEEEEccCCchHHHHHHHHHHHhcCcEE
Confidence 344444677889999999999753 6777778999999999987 8999999999999886654443 34558888
Q ss_pred EEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEE
Q 040741 174 TYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMS 253 (457)
Q Consensus 174 ~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~ 253 (457)
+.++.. |+++++++++++|++|++++++||+|.+.++++|.++|+++|+++++|++++.+.....+ .+++|+++
T Consensus 128 ~~v~~~-----d~~~l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~~pl-~~gaDivv 201 (405)
T PRK08776 128 ITADLT-----DPRSLADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQKPL-EFGADLVL 201 (405)
T ss_pred EEECCC-----CHHHHHHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccCCcc-cccCCEEE
Confidence 887653 899999999999999999999999999999999999999999999999999876532222 46789999
Q ss_pred eccccccC-CCC--ceEEEEecC-CCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 040741 254 LSGHKIYG-PKG--VGALYMRRR-PRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRL 329 (457)
Q Consensus 254 ~s~~K~~g-~~G--~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l 329 (457)
.|.+|+++ +.+ .|+++.+++ ..+++....... ....++.....+.. ..+.++.++++..+++..+
T Consensus 202 ~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~-------g~~~s~~~a~l~~~----gl~tl~~r~~~~~~na~~l 270 (405)
T PRK08776 202 HSTTKYINGHSDVVGGAVVARDAELHQQLVWWANAL-------GLTGSPFDAFLTLR----GLRTLDARLRVHQENADAI 270 (405)
T ss_pred ecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhc-------CCCCCHHHHHHHHh----hhCcHHHHHHHHHHHHHHH
Confidence 99999665 443 577776543 323332211111 11233333332222 2235678888999999999
Q ss_pred HHHHhhcCCCeEEeCCC---C-----------CcccceEEEEEccc-c-chHHHhccc--CeEecccCccC----CCCCC
Q 040741 330 LNGIKEKLDGVVVNGSM---E-----------RRYIGNLNLSFAYV-E-GESLLMGLK--EVAVSSGSACT----SASLE 387 (457)
Q Consensus 330 ~~~l~~~~~~~~~~~~~---~-----------~~~~~~~~~~~~~~-~-~~~~~~~l~--~i~~~~g~~~~----~~~~~ 387 (457)
.+.|++ .|.+.-+..| . ...++++.|.+++- + ...+++.|+ .++.+-|...+ +....
T Consensus 271 a~~L~~-~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~ 349 (405)
T PRK08776 271 AALLDG-HAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGGEAAVRAFVDGLRYFTLAESLGGVESLIAHPASMT 349 (405)
T ss_pred HHHHHc-CCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCCHHHHHHHHHhCCcceEccCCCCCceEEECCcccc
Confidence 999998 7876432211 1 23577888888631 1 235666663 44555565432 22222
Q ss_pred h----hHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 388 P----SYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 388 ~----~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
+ .-.....|+.+ +.|||+++. ||+|.+++.|+++++++.
T Consensus 350 h~~~~~~~~~~~gi~~----~liR~svGl----E~~~dli~dl~~al~~~~ 392 (405)
T PRK08776 350 HAAMTAEARAAAGISD----GLLRLSVGI----ESAEDLLIDLRAGLARAE 392 (405)
T ss_pred cccCCHHHHHhcCCCC----CeEEEEeCc----CCHHHHHHHHHHHHHHhH
Confidence 1 12234567665 899999997 788888888888887653
No 175
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.94 E-value=1.3e-24 Score=216.77 Aligned_cols=315 Identities=14% Similarity=0.157 Sum_probs=217.2
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHH-HHHhcCcEE
Q 040741 95 FGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCR-HLQQEGFEI 173 (457)
Q Consensus 95 ~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~G~~v 173 (457)
|+....+....+++.++++.|.+. .++++||+.|+.+++.++. ++||+|+++.+.|++....+. .++..|+++
T Consensus 58 y~r~~~p~~~~Le~~lA~leg~~~--al~~~sG~~Ai~~al~~ll----~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v 131 (431)
T PRK08248 58 YTRIMNPTTDVFEKRIAALEGGIG--ALAVSSGQAAITYSILNIA----SAGDEIVSSSSLYGGTYNLFAHTLPKLGITV 131 (431)
T ss_pred eECCCCchHHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHHh----CCCCEEEEccCchhhHHHHHHHHHHhCCEEE
Confidence 344445678889999999999754 8999999999999999887 899999999999987766554 356679999
Q ss_pred EEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEE
Q 040741 174 TYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMS 253 (457)
Q Consensus 174 ~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~ 253 (457)
++++.. |++++++++++++++|++++++||+|.+.|+++|.++|+++|+++++|++++.+....++ ++++|+++
T Consensus 132 ~~vd~~-----d~e~l~~ai~~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~~~pl-~~gaDivv 205 (431)
T PRK08248 132 KFVDPS-----DPENFEAAITDKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYLLRPI-EHGADIVV 205 (431)
T ss_pred EEECCC-----CHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccccCChh-HcCCCEEE
Confidence 999864 899999999999999999999999999999999999999999999999999865433333 57899999
Q ss_pred eccccccCCCC--ceEEEEecCCCc-c-------cccc---c------c--CCc----c----ccccccCCCChhHHHHH
Q 040741 254 LSGHKIYGPKG--VGALYMRRRPRI-R-------VEPL---I------N--GGG----Q----ERGIRSGTLPTPLIVGF 304 (457)
Q Consensus 254 ~s~~K~~g~~G--~G~l~~~~~~~~-~-------~~~~---~------~--~~~----~----~~~~~~~t~~~~~~~al 304 (457)
.|++|++|+.| +|.+++.+.... . +... . . +.. . .........++..+.-+
T Consensus 206 ~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~ 285 (431)
T PRK08248 206 HSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLL 285 (431)
T ss_pred EcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 99999887665 666666432111 0 0000 0 0 000 0 00000112222211111
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEE-eCC--CC------------CcccceEEEEEccc--cchHHH
Q 040741 305 GSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVV-NGS--ME------------RRYIGNLNLSFAYV--EGESLL 367 (457)
Q Consensus 305 ~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~--~~------------~~~~~~~~~~~~~~--~~~~~~ 367 (457)
... .+.+..++++..+++.++.+.|++ .|.+.- +-+ +. ...++++.|.+.+- ....++
T Consensus 286 ~rg----l~tl~~R~~~~~~nA~~la~~L~~-~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~ 360 (431)
T PRK08248 286 LQG----LETLHLRMERHSENALAVAKFLEE-HEAVEWVSYPGLPSHPSYELAKKYLPKGQGAILTFGIKGGVEAGKKLI 360 (431)
T ss_pred hcC----cCcHHHHHHHHHHHHHHHHHHHHh-CCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHH
Confidence 110 123668889999999999999999 887642 221 11 23467777887531 123555
Q ss_pred hccc--CeEecccCccC----CCCCCh----hHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 368 MGLK--EVAVSSGSACT----SASLEP----SYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 368 ~~l~--~i~~~~g~~~~----~~~~~~----~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
..|+ .++++-|...+ +....+ .-..+..|+.+ +.|||+++. ||+|.+++.|+++++..+
T Consensus 361 ~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~----~liRlsvGl----Ed~~dL~~Dl~~Al~~~~ 429 (431)
T PRK08248 361 DSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTP----GLVRLSVGT----EAIDDILDDLRQAIRQSQ 429 (431)
T ss_pred HhCCcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHHhhh
Confidence 6653 44555565433 222221 11234567765 899999996 889999999999988654
No 176
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.94 E-value=1.5e-24 Score=215.30 Aligned_cols=313 Identities=14% Similarity=0.134 Sum_probs=216.3
Q ss_pred chhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHH-HHHhcCcE
Q 040741 94 LFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCR-HLQQEGFE 172 (457)
Q Consensus 94 ~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~G~~ 172 (457)
.|++...+.+.++++.++++.|+++ .++++||+.|+.+++.++. ++||+|+++.+.|........ .+...|++
T Consensus 58 ~y~r~~~p~~~~le~~lA~l~g~~~--~i~~~sG~~Al~~~l~~ll----~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~ 131 (403)
T PRK07503 58 FYSRISNPTLALLEQRMASLEGGEA--AVALASGMGAITATLWTLL----RPGDEVIVDQTLYGCTFAFLHHGLGEFGVT 131 (403)
T ss_pred eeeCCCCchHHHHHHHHHHHhCCCc--EEEEcCHHHHHHHHHHHHc----CCCCEEEEccCccchHHHHHHHHHhhCCEE
Confidence 3444445678999999999999865 6788889999999998887 899999999998877655443 34556999
Q ss_pred EEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEE
Q 040741 173 ITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLM 252 (457)
Q Consensus 173 v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~ 252 (457)
+++++.+ |+++++++++++|++|++++++||+|.+.|+++|.++|+++|+++++|++++.+.....+ ..++|++
T Consensus 132 v~~vd~~-----d~~~l~~~i~~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~~~l-~~g~Di~ 205 (403)
T PRK07503 132 VRHVDLT-----DPAALKAAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQRPL-ELGADLV 205 (403)
T ss_pred EEEeCCC-----CHHHHHHhcCccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCch-hhCCCEE
Confidence 9999875 899999999999999999999999999999999999999999999999999866432222 3578999
Q ss_pred EeccccccCCCC---ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 040741 253 SLSGHKIYGPKG---VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRL 329 (457)
Q Consensus 253 ~~s~~K~~g~~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l 329 (457)
+.|++|++|+.| +|+++.+++..++++..... ......++....+.+...+ +.+..+.++..+++..+
T Consensus 206 v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~-----~~~g~~~s~~~a~l~l~~L----~tl~~r~~~~~~na~~~ 276 (403)
T PRK07503 206 VHSATKYLGGHGDITAGLVVGGKALADRIRLEGLK-----DMTGAVMSPFDAFLLMRGL----KTLALRMDRHCASAQAV 276 (403)
T ss_pred EccccccccCCCceeEEEEEcCHHHHHHHHhhhHH-----hCcCCCCCHHHHHHHHcCc----chHHHHHHHHHHHHHHH
Confidence 999999777644 68888766554444321100 0111233333332222222 24566667777889999
Q ss_pred HHHHhhcCCCeEEe-CC--CC-----------CcccceEEEEEcc-c-cchHHHhccc--CeEecccCccC----CCCCC
Q 040741 330 LNGIKEKLDGVVVN-GS--ME-----------RRYIGNLNLSFAY-V-EGESLLMGLK--EVAVSSGSACT----SASLE 387 (457)
Q Consensus 330 ~~~l~~~~~~~~~~-~~--~~-----------~~~~~~~~~~~~~-~-~~~~~~~~l~--~i~~~~g~~~~----~~~~~ 387 (457)
.+.|++ .|.+..+ -+ +. ...++++.|.+++ . ....+...++ ..+..-|...+ +.++.
T Consensus 277 a~~L~~-~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~l~l~~~~~slG~~~sl~~~~~~~~ 355 (403)
T PRK07503 277 AEWLAR-HPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKGGIAAGRRFMNALQLFARAVSLGDAESLAQHPASMT 355 (403)
T ss_pred HHHHHh-CCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECCCHHHHHHHHHhCCcceeecccCCCCccCcCCCCCc
Confidence 999988 7776432 11 11 1246677777653 1 1234555553 33334444322 22221
Q ss_pred h----hHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 040741 388 P----SYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLREM 436 (457)
Q Consensus 388 ~----~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~~ 436 (457)
+ .-.....|+.+ +.|||+++. ||+|.+++.|+++++...+.
T Consensus 356 h~~~~~~~~~~~gi~~----~liR~svGl----E~~~dl~~dl~~Al~~~~~~ 400 (403)
T PRK07503 356 HSTYTPEERAEHGISE----GLVRLSVGL----EDVADILADLAQALDACAVA 400 (403)
T ss_pred cccCCHHHHHhcCCCC----CeEEEEEec----CCHHHHHHHHHHHHHHHHHh
Confidence 1 11234566665 899999997 78888999999998876543
No 177
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=6.2e-25 Score=216.59 Aligned_cols=307 Identities=14% Similarity=0.093 Sum_probs=215.8
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcE
Q 040741 93 HLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFE 172 (457)
Q Consensus 93 ~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~ 172 (457)
+.|++...+.+.++|+.+++++|.+ ++++++||+.|+..++.++. ++||+|+++.+.|.+....++.+...|++
T Consensus 45 ~~y~r~~np~~~~lE~~lA~l~g~~--~~l~~~sG~~Ai~~~l~~ll----~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~ 118 (385)
T PRK08574 45 LKYSREENPTLRPLEEALAKLEGGV--DALAFNSGMAAISTLFFSLL----KAGDRVVLPMEAYGTTLRLLKSLEKFGVK 118 (385)
T ss_pred ceEECCCCccHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHHh----CCCCEEEEcCCCchhHHHHHHHhhccCcE
Confidence 3445555578899999999999975 37888999999999999887 89999999999999998877665566888
Q ss_pred EEEEeCCCCCCCCHHHHHHhcCC-CceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccE
Q 040741 173 ITYLPVGADGIVNLDELRAAIRP-DTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSL 251 (457)
Q Consensus 173 v~~v~~~~~~~~d~~~le~~i~~-~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di 251 (457)
+++++ +|++++++++++ ++++|++++++||+|.+.|+++|.++|+++|+++++|++++.+...... ..++|+
T Consensus 119 v~~~~------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l-~~GaDi 191 (385)
T PRK08574 119 VVLAY------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYRPL-RHGADF 191 (385)
T ss_pred EEEEC------CCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCChh-hhCCcE
Confidence 87764 368999999998 8999999999999999999999999999999999999999877542222 457899
Q ss_pred EEeccccccC-CCC--ceEEEEec-CCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 040741 252 MSLSGHKIYG-PKG--VGALYMRR-RPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHD 327 (457)
Q Consensus 252 ~~~s~~K~~g-~~G--~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~ 327 (457)
++.|++|+++ +.+ .|++++++ +..+++...... .....++...+.+...+ +.+..++++..+++.
T Consensus 192 vv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~-------~g~~~~p~~a~l~l~~l----~tL~~R~~~~~~na~ 260 (385)
T PRK08574 192 VVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRR-------LGTIMQPFEAYLVLRGL----KTLEVRFERQCRNAM 260 (385)
T ss_pred EEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHh-------cCCCCCHHHHHHHHccc----CcHHHHHHHHHHHHH
Confidence 9999999665 432 37566543 333333322211 11133333222222222 236677788888999
Q ss_pred HHHHHHhhcCCCeE-EeCC--CC-------------CcccceEEEEEccc--cchHHHhccc--CeEecccCccC----C
Q 040741 328 RLLNGIKEKLDGVV-VNGS--ME-------------RRYIGNLNLSFAYV--EGESLLMGLK--EVAVSSGSACT----S 383 (457)
Q Consensus 328 ~l~~~l~~~~~~~~-~~~~--~~-------------~~~~~~~~~~~~~~--~~~~~~~~l~--~i~~~~g~~~~----~ 383 (457)
++.+.|++ .|.+. |+-+ ++ ..+++++.|.+++- ....+++.|+ .++++-|...+ +
T Consensus 261 ~la~~L~~-~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~l~l~~~~~s~G~~~sl~~~~ 339 (385)
T PRK08574 261 AIAEFLSE-HPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKGGRDAVLKFLRSLKLIKPSPSLGGVESLATYP 339 (385)
T ss_pred HHHHHHHc-CCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCCCHHHHHHHHHcCCcceEccCCCCCcceeeCC
Confidence 99999988 77763 3221 11 12567777887631 1245566663 44555565432 2
Q ss_pred CCCCh----hHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 384 ASLEP----SYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 384 ~~~~~----~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
....+ .-..+..|+.+ +.|||+++. ||+|.+++.|++++++
T Consensus 340 ~~~~~~~~~~~~~~~~gi~~----~liR~svGl----E~~~dli~dl~~al~~ 384 (385)
T PRK08574 340 VKSAASPIPEEDRKALGITE----DLVRLSVGL----EDVEDLIEDLDQALGS 384 (385)
T ss_pred CcCCcccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHhc
Confidence 22222 11234566664 899999997 7888899999888864
No 178
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.94 E-value=7.6e-24 Score=214.41 Aligned_cols=257 Identities=16% Similarity=0.204 Sum_probs=190.2
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCC-----------C--CcEEEeCChHHHHHHHHHHhhhhhc----------------
Q 040741 93 HLFGWESEVAVETARSQIADLIGAS-----------P--KEIIFTSGATESNNVSIKGVMHFYK---------------- 143 (457)
Q Consensus 93 ~~~~~~~~~~~~~~~~~la~~~g~~-----------~--~~i~~t~g~T~a~~~al~~~~~~~~---------------- 143 (457)
+..+....+.-..+.++++++++.. + ...+||+|||+|+..++.+.+....
T Consensus 121 ~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~ 200 (522)
T TIGR03799 121 IETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFA 200 (522)
T ss_pred eecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchh
Confidence 3334444566667888888888521 1 2379999999999999988765321
Q ss_pred ------CCCCEEEEcCCCCcchHHHHHHHHhcCc---EEEEEeCCCCCCCCHHHHHHhcC----CCceEEEEe--ccccc
Q 040741 144 ------DKKRHVITTQTEHKCVLDSCRHLQQEGF---EITYLPVGADGIVNLDELRAAIR----PDTGLISVM--AVNNE 208 (457)
Q Consensus 144 ------~~g~~vi~~~~~h~~~~~~~~~~~~~G~---~v~~v~~~~~~~~d~~~le~~i~----~~t~li~i~--~~~~~ 208 (457)
.++..|++++.+|.|+..+++.+ |+ +++.+|++.+|.+|+++|+++|+ .+++.++++ ..++.
T Consensus 201 ~~~~~~~~~~~v~~S~~~H~S~~kaa~~l---glg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~ 277 (522)
T TIGR03799 201 ALKHYGYDGLAILVSERGHYSLGKAADVL---GIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTE 277 (522)
T ss_pred hhhhccCCceEEEECCCchHHHHHHHHHc---CCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcC
Confidence 12457899999999999998888 65 89999999999999999999986 455555555 55668
Q ss_pred cccccChHHHHHHHHhcCCcEEEehhhhcCCCccc-----CCCC-cccEEEecccc-ccCCCCceEEEEecCCC-ccccc
Q 040741 209 IGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVD-----VEKW-NVSLMSLSGHK-IYGPKGVGALYMRRRPR-IRVEP 280 (457)
Q Consensus 209 ~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~-----~~~~-~~Di~~~s~~K-~~g~~G~G~l~~~~~~~-~~~~~ 280 (457)
+|.+.|+++|+++|+++|+++|+|+|++.+....+ +... ++|++++++|| +++|.|+|+++++++.. ..+.+
T Consensus 278 tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~~~~~~ 357 (522)
T TIGR03799 278 TGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALMSAIEH 357 (522)
T ss_pred CCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHHHHhcc
Confidence 99999999999999999999999999997765443 3333 68999999999 78899999999987422 22222
Q ss_pred ---ccc-CCc---cccccccCCCChhHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccc
Q 040741 281 ---LIN-GGG---QERGIRSGTLPTPLIVGFGSACEIAK-KEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIG 352 (457)
Q Consensus 281 ---~~~-~~~---~~~~~~~~t~~~~~~~al~~al~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 352 (457)
++. .++ ....+. ++-+... ..+..+++.+. .+++++.++..++++++.+.|.+ .|+++++.++. .+
T Consensus 358 ~~~Yl~~~~~~d~~~~~le-gsR~~~a-l~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~-~~~~el~~~p~---l~ 431 (522)
T TIGR03799 358 HAEYILRKGSKDLGSHTLE-GSRPGMA-MLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQ-QPDFELVTEPE---LC 431 (522)
T ss_pred CcchhcCCCCCccccceee-cCcchHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhh-CCCeEEecCCC---cc
Confidence 111 011 011233 2333333 34667777664 47999999999999999999999 89999998643 45
Q ss_pred eEEEEE
Q 040741 353 NLNLSF 358 (457)
Q Consensus 353 ~~~~~~ 358 (457)
++.|.+
T Consensus 432 iv~Fr~ 437 (522)
T TIGR03799 432 LLTYRY 437 (522)
T ss_pred EEEEEE
Confidence 666665
No 179
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.94 E-value=2.6e-24 Score=214.13 Aligned_cols=318 Identities=15% Similarity=0.158 Sum_probs=219.6
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHH-HHhcCcEE
Q 040741 95 FGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRH-LQQEGFEI 173 (457)
Q Consensus 95 ~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~-~~~~G~~v 173 (457)
|+....+....+++.++++.|.+. .+++++|+.|+.+++.+++ ++|++|+++...|.+....+.. +...|+++
T Consensus 63 Ysr~~~p~~~~Le~~lA~l~g~~~--av~~sSG~aAi~~al~all----~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v 136 (436)
T PRK07812 63 YTRIMNPTQDVVEQRIAALEGGVA--ALLLASGQAAETFAILNLA----GAGDHIVSSPRLYGGTYNLFHYTLPKLGIEV 136 (436)
T ss_pred ccCCCCchHHHHHHHHHHHhCCCe--EEEEccHHHHHHHHHHHHh----CCCCEEEEeCCcchHHHHHHHHHhhcCeEEE
Confidence 444444678899999999999876 8999999999999999988 8999999999999887765543 35568888
Q ss_pred EEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEE
Q 040741 174 TYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMS 253 (457)
Q Consensus 174 ~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~ 253 (457)
++++ +. .|+++++++++++|++|++++++||+|.+.|+++|.++||++|+++++|++++.+.... ..++++|+++
T Consensus 137 ~~vd-d~---~d~e~l~~ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~~~-pl~~GaDivv 211 (436)
T PRK07812 137 SFVE-DP---DDLDAWRAAVRPNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYLIR-PLEHGADIVV 211 (436)
T ss_pred EEEC-CC---CCHHHHHHhCCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCC-chhcCCCEEE
Confidence 8885 22 28999999999999999999999999999999999999999999999999998765533 3356899999
Q ss_pred eccccccCCCC--ceEEEEecCCCccccccccCCcc-------------------------ccccccCCCChhHHHHHHH
Q 040741 254 LSGHKIYGPKG--VGALYMRRRPRIRVEPLINGGGQ-------------------------ERGIRSGTLPTPLIVGFGS 306 (457)
Q Consensus 254 ~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~t~~~~~~~al~~ 306 (457)
.|+||++|+.| +|.+++.........+....... .........++..++-+..
T Consensus 212 ~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r 291 (436)
T PRK07812 212 HSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLIAQ 291 (436)
T ss_pred EecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHhc
Confidence 99999877665 55555543321110000000000 0000001122211111110
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEE-eCC--CC------------CcccceEEEEEccc--cchHHHhc
Q 040741 307 ACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVV-NGS--ME------------RRYIGNLNLSFAYV--EGESLLMG 369 (457)
Q Consensus 307 al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~--~~------------~~~~~~~~~~~~~~--~~~~~~~~ 369 (457)
-...+..++++..+++.++.+.|++ .|.+.- +-+ +. ..+++++.|.+.+- ....++..
T Consensus 292 ----gl~tL~~R~~~~~~nA~~la~~L~~-~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~ 366 (436)
T PRK07812 292 ----GLETLSLRIERHVANAQRVAEFLEA-RDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAGGVEAGKAFVNA 366 (436)
T ss_pred ----CcCcHHHHHHHHHHHHHHHHHHHHh-CCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHh
Confidence 1124788899999999999999999 887632 222 11 23577788887531 13456666
Q ss_pred cc--CeEecccCc----cCCCCCChh----HHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 040741 370 LK--EVAVSSGSA----CTSASLEPS----YVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLREM 436 (457)
Q Consensus 370 l~--~i~~~~g~~----~~~~~~~~~----~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~~ 436 (457)
|+ .++.+-|.. |.+....+. -..+..|+.+ +.|||+++. ||+|.+++.|+++++..+.-
T Consensus 367 l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~----~liRlSvGl----Ed~~dli~dl~~Al~~~~~~ 435 (436)
T PRK07812 367 LTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTP----GLVRLAVGI----EGIDDILADLEAGFAAAKAF 435 (436)
T ss_pred CCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHHhhhcc
Confidence 64 444444543 223332221 1234567765 899999997 88999999999999887753
No 180
>PRK08175 aminotransferase; Validated
Probab=99.94 E-value=3.4e-24 Score=213.62 Aligned_cols=331 Identities=17% Similarity=0.172 Sum_probs=223.7
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh----C--CCCC-cEEEeCCh
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI----G--ASPK-EIIFTSGA 127 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~----g--~~~~-~i~~t~g~ 127 (457)
.+.+.|+.+.+. ..++.+.+++.+.+... .. . +|.......++++.+++++ | ++++ ++++|+|+
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~--~~----~--~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~ 100 (395)
T PRK08175 29 EDIIDFSMGNPDGPTPPHIVEKLCEVAQRP--DT----H--GYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGS 100 (395)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhCC--Cc----C--CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCc
Confidence 344666655444 34566777777665321 11 1 1111123455666666654 4 3565 79999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcC---CCceEEEEec
Q 040741 128 TESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIR---PDTGLISVMA 204 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~---~~t~li~i~~ 204 (457)
++++.+++..++ ++|++|+++++.|+.+...++.. |.+++.++.+.++ .+.++++++++ +++++|++++
T Consensus 101 ~~~l~~~~~~~~----~~gd~Vlv~~P~y~~~~~~~~~~---g~~~~~v~~~~~~-~~~~~l~~~l~~~~~~~~~v~i~~ 172 (395)
T PRK08175 101 KEGLAHLMLATL----DHGDTVLVPNPSYPIHIYGAVIA---GAQVRSVPLVEGV-DFFNELERAIRESYPKPKMMILGF 172 (395)
T ss_pred HHHHHHHHHHhC----CCCCEEEEcCCCCcchHHHHHHc---CCeEEEEecccCC-CcHHHHHHHHhhccCCceEEEEeC
Confidence 999999988887 89999999999999988777665 9999999987543 25788888776 4789999999
Q ss_pred cccccccccCh---HHHHHHHHhcCCcEEEehhhhcCC----Cccc---CCC-CcccEEEeccccccCCCC--ceEEEEe
Q 040741 205 VNNEIGVIQPM---EEIGQICKEFKIPFHTDAAQALGK----IPVD---VEK-WNVSLMSLSGHKIYGPKG--VGALYMR 271 (457)
Q Consensus 205 ~~~~~G~~~~l---~~i~~l~~~~~v~li~D~a~~~g~----~~~~---~~~-~~~Di~~~s~~K~~g~~G--~G~l~~~ 271 (457)
++||+|.+.+. ++|+++|++||+++|+|++++-.. .... ... .+..+++.|++|.||.+| +|+++.+
T Consensus 173 p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~ 252 (395)
T PRK08175 173 PSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGN 252 (395)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCC
Confidence 99999999996 789999999999999999986321 1111 111 134467899999887666 8999988
Q ss_pred cCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCccc
Q 040741 272 RRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYI 351 (457)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 351 (457)
++.++++....... ..+.+.+...++..++......+++.+++++++++++.+.|++ . ++.+..+ .. .
T Consensus 253 ~~l~~~~~~~~~~~-------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~-~-~~~~~~p-~~--g 320 (395)
T PRK08175 253 PELVSALARIKSYH-------DYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHE-A-GWMVEMP-KA--S 320 (395)
T ss_pred HHHHHHHHHHHhhc-------ccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH-c-CCcccCC-CE--E
Confidence 77666554332211 1123333334344455433334777888888999999999998 5 5554332 11 3
Q ss_pred ceEEEEEccc----cchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHH
Q 040741 352 GNLNLSFAYV----EGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIE 424 (457)
Q Consensus 352 ~~~~~~~~~~----~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~ 424 (457)
.++.+.++.. +..++...+ .||.+.+|..+.. ...+++||++. .+.+.++.+++
T Consensus 321 ~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~-----------------~~~~~lRis~~--~~~~~~~~al~ 381 (395)
T PRK08175 321 MYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGD-----------------YGDTHVRFALI--ENRDRIRQAIR 381 (395)
T ss_pred EEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCc-----------------CCCCeEEEEeC--CCHHHHHHHHH
Confidence 4444554421 245665543 5999988864321 12368999996 46899999999
Q ss_pred HHHHHHHHH
Q 040741 425 LTVKQVEKL 433 (457)
Q Consensus 425 ~l~~~~~~~ 433 (457)
+|.+++++.
T Consensus 382 ~l~~~l~~~ 390 (395)
T PRK08175 382 GIKAMFRAD 390 (395)
T ss_pred HHHHHHHhc
Confidence 999888754
No 181
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.94 E-value=1.6e-24 Score=217.67 Aligned_cols=349 Identities=13% Similarity=0.137 Sum_probs=232.6
Q ss_pred ccCCCcEEecCCCCCCCCHHHHHHHHHHHhh-ccC--CCCCCccchhhhHHHHHHHHHHHHHHHhC--------CCCCcE
Q 040741 53 RIAGRPLYLDMQATTPVDPRVLDAMLPFYLS-RYG--NPHSRTHLFGWESEVAVETARSQIADLIG--------ASPKEI 121 (457)
Q Consensus 53 ~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~-~~~--~p~~~~~~~~~~~~~~~~~~~~~la~~~g--------~~~~~i 121 (457)
.+..+.|.|+.+.+..+.+.+.+.+.+.... .+. +.....+...|.......++++.+|++++ ++++++
T Consensus 44 ~np~g~i~l~~aeN~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~I 123 (447)
T PLN02607 44 HNPSGVIQMGLAENQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRI 123 (447)
T ss_pred cCCCceEEEechhhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHe
Confidence 4567789999999889888888888775431 000 00000000011112345667777777664 577889
Q ss_pred EEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC--CCCCCHHHHHHhcCC----
Q 040741 122 IFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA--DGIVNLDELRAAIRP---- 195 (457)
Q Consensus 122 ~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~le~~i~~---- 195 (457)
++|+|+|+|+.+++.+++ ++||.|+++.+.|+.+...+.. ..|.+++.++.+. +..+|++++++++++
T Consensus 124 vit~G~t~al~~l~~~l~----~pGD~Vlv~~P~Y~~f~~~~~~--~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~ 197 (447)
T PLN02607 124 VLTAGATAANELLTFILA----DPGDALLVPTPYYPGFDRDLRW--RTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAA 197 (447)
T ss_pred EEcCChHHHHHHHHHHhC----CCCCEEEEcCCCCcchHHHHHh--cCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHh
Confidence 999999999999999988 8999999999999998765542 2488999988763 245899999998864
Q ss_pred --CceEEEEeccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCCC---cc-cC-------C--C-CcccEEEecc
Q 040741 196 --DTGLISVMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKI---PV-DV-------E--K-WNVSLMSLSG 256 (457)
Q Consensus 196 --~t~li~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~---~~-~~-------~--~-~~~Di~~~s~ 256 (457)
+++++++++++||+|.+++ +++|.++|++|++++|+|++|+.... ++ .+ . . .+.-+++.|+
T Consensus 198 ~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~ 277 (447)
T PLN02607 198 NIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSL 277 (447)
T ss_pred CCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcc
Confidence 6889999999999999998 77889999999999999999974211 11 10 0 1 1223677899
Q ss_pred ccccCCCC--ceEEEEec-CCCccccccccCCccccccccCCCChhHHHHHHHHHHH---HHHhhHHHHHHHHHHHHHHH
Q 040741 257 HKIYGPKG--VGALYMRR-RPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEI---AKKEMDYDHKRITALHDRLL 330 (457)
Q Consensus 257 ~K~~g~~G--~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~---~~~~~~~~~~~~~~~~~~l~ 330 (457)
+|.||.+| +|+++..+ .++..+.... ..+..+......+...++. ....+...++++++.++.+.
T Consensus 278 SK~fg~~GlRvG~ivs~n~~l~~~~~~~~---------~~~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~ 348 (447)
T PLN02607 278 SKDLGLPGFRVGTIYSYNDKVVTTARRMS---------SFTLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIV 348 (447)
T ss_pred hhcCCCCcceEEEEEEcCHHHHHHHHHHh---------hcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 99887665 89999843 2322222111 0112233333333333321 12235667778888888899
Q ss_pred HHHhhcCCCeEEeCCCCCcccceEEEEEccc------c-chHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCcc
Q 040741 331 NGIKEKLDGVVVNGSMERRYIGNLNLSFAYV------E-GESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDED 400 (457)
Q Consensus 331 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~ 400 (457)
+.|++ . ++.+..+ .. +.++.+.++.. + ..++...+ .||.+.+|..|...
T Consensus 349 ~~L~~-~-gi~~~~~-~a--g~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~---------------- 407 (447)
T PLN02607 349 QGLRR-A-GIECLKG-NA--GLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCS---------------- 407 (447)
T ss_pred HHHHh-C-CCCcccC-Ce--eEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCC----------------
Confidence 99988 3 5554332 11 33344444321 1 12444444 48999999765421
Q ss_pred CCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHhcChh
Q 040741 401 MAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLREMSPL 439 (457)
Q Consensus 401 ~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~~~~~ 439 (457)
..+++||+++. .++++++.++++|.+++++-+..|-+
T Consensus 408 -~~g~fRi~fa~-~~~~~l~~gl~Ri~~~l~~~~~~~~~ 444 (447)
T PLN02607 408 -EPGWFRVCFAN-MSEDTLEVALKRIHRFMDRRKTASSQ 444 (447)
T ss_pred -CCCEEEEEecc-CCHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 12899999996 45899999999999999887766543
No 182
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.94 E-value=1.3e-24 Score=215.48 Aligned_cols=304 Identities=13% Similarity=0.115 Sum_probs=215.9
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHH-HHHhcCcEE
Q 040741 95 FGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCR-HLQQEGFEI 173 (457)
Q Consensus 95 ~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~G~~v 173 (457)
|++...+...++++.++++.|.+ +++++++|+.|+..++.++. ++||+|+++...|.+...... .+...|+++
T Consensus 64 Y~r~~~p~~~~le~~lA~l~g~~--~al~~~sG~~Ai~~~l~all----~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v 137 (403)
T PRK07810 64 YSRYGNPTVSMFEERLRLIEGAE--ACFATASGMSAVFTALGALL----GAGDRLVAARSLFGSCFVVCNEILPRWGVET 137 (403)
T ss_pred eeCCCCchHHHHHHHHHHHhCCC--cEEEECChHHHHHHHHHHHh----CCCCEEEEccCCcchHHHHHHHHHHHcCcEE
Confidence 34344467889999999999976 48999999999999998887 899999999888866655443 456679999
Q ss_pred EEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEE
Q 040741 174 TYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMS 253 (457)
Q Consensus 174 ~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~ 253 (457)
++++.. |+++++++++++|++|++++++||+|.+.|+++|.++|+++|+++++|++++.+..... ...++|+++
T Consensus 138 ~~vd~~-----d~~~l~~ai~~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~-~~~gaDivv 211 (403)
T PRK07810 138 VFVDGE-----DLSQWEEALSVPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQRG-LPLGADVVV 211 (403)
T ss_pred EEECCC-----CHHHHHHhcCcCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCCh-hhcCCcEEE
Confidence 999854 89999999999999999999999999999999999999999999999999987654322 245789999
Q ss_pred eccccccCCCC---ceEEEEecCCCc-cccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 040741 254 LSGHKIYGPKG---VGALYMRRRPRI-RVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRL 329 (457)
Q Consensus 254 ~s~~K~~g~~G---~G~l~~~~~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l 329 (457)
.|++|++++.| .|+++.+++.+. ++....... ...+++...+.+...+ +.+..++++..+++.++
T Consensus 212 ~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~-------g~~~s~~~a~l~l~~L----~tl~~R~~~~~~~a~~~ 280 (403)
T PRK07810 212 YSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHT-------GPALSAFNAWVLLKGL----ETLALRVRHSNASALRI 280 (403)
T ss_pred ccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHh-------CCCCCHHHHHHHHhcc----CcHHHHHHHHHHHHHHH
Confidence 99999776544 488887765433 232222111 1134444333333232 34677888888899999
Q ss_pred HHHHhhcCCCeEEeC-C--CC-----------CcccceEEEEEccc---c---chHHHhccc--CeEecccCccC----C
Q 040741 330 LNGIKEKLDGVVVNG-S--ME-----------RRYIGNLNLSFAYV---E---GESLLMGLK--EVAVSSGSACT----S 383 (457)
Q Consensus 330 ~~~l~~~~~~~~~~~-~--~~-----------~~~~~~~~~~~~~~---~---~~~~~~~l~--~i~~~~g~~~~----~ 383 (457)
.+.|++ .|.+.-+- + +. ...++++.|.+.+. + ..+++..|+ .+++.-|...+ +
T Consensus 281 a~~L~~-~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p 359 (403)
T PRK07810 281 AEFLEG-HPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKKRAFEVLDKLRVIDISNNLGDAKSLITHP 359 (403)
T ss_pred HHHHhc-CCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCHHHHHHHHHhCCceEEeccCCCCcceeeCC
Confidence 999998 77764322 1 11 13467788887531 1 235666553 44555554433 2
Q ss_pred CCCCh----hHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHH
Q 040741 384 ASLEP----SYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 384 ~~~~~----~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~ 430 (457)
....+ .-.....|+.+ +.+||+++. |+++.+++.|++++
T Consensus 360 ~~~~h~~~~~~~~~~~gi~~----~lvR~svGl----E~~~dli~dl~~Al 402 (403)
T PRK07810 360 ATTTHRAMGPEGRAAIGLGD----GVVRLSVGL----EDTDDLIADLDRAL 402 (403)
T ss_pred CccccccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHhh
Confidence 21111 11233566654 799999997 78888888888765
No 183
>PLN02880 tyrosine decarboxylase
Probab=99.94 E-value=3.4e-24 Score=216.59 Aligned_cols=349 Identities=15% Similarity=0.136 Sum_probs=233.7
Q ss_pred CCCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCC-------cEEEeCCh
Q 040741 55 AGRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPK-------EIIFTSGA 127 (457)
Q Consensus 55 ~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~-------~i~~t~g~ 127 (457)
..++-|+.+-..++.++.++--+.... + |+...++..+......-.++.+++++++|.+.. ..++|+||
T Consensus 80 ~~hP~f~~~~~~~~~~~~~lad~l~~~---~-n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsgg 155 (490)
T PLN02880 80 WQSPNYFAYYPSNSSVAGFLGEMLSAG---L-NIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTA 155 (490)
T ss_pred CCCCCeeEeccCCCcHHHHHHHHHHHh---h-ccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCcc
Confidence 355678887666666665555444333 3 222223333444556777799999999999753 38999999
Q ss_pred HHHHHHHHHHhhhhhcC-------CCCEEEEcCCCCcchHHHHHHHHhcCc---EEEEEeCCC--CCCCCHHHHHHhcCC
Q 040741 128 TESNNVSIKGVMHFYKD-------KKRHVITTQTEHKCVLDSCRHLQQEGF---EITYLPVGA--DGIVNLDELRAAIRP 195 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~-------~g~~vi~~~~~h~~~~~~~~~~~~~G~---~v~~v~~~~--~~~~d~~~le~~i~~ 195 (457)
|+|+..++.+.+....+ ++-.|++++..|.++.++++.+ |+ .++.||++. ++.+|+++|+++|.+
T Consensus 156 s~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~l---Glg~~~v~~Vp~d~~~~~~md~~~L~~~i~~ 232 (490)
T PLN02880 156 SEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIA---GIHPENCRLLKTDSSTNYALAPELLSEAIST 232 (490)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHc---CCCHHHEEEeecCCCcCCcCCHHHHHHHHHH
Confidence 99999999887743211 2335667888999999999998 66 578888874 578999999999964
Q ss_pred C------ceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcc-----cCCC-CcccEEEecccc-ccCC
Q 040741 196 D------TGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPV-----DVEK-WNVSLMSLSGHK-IYGP 262 (457)
Q Consensus 196 ~------t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~-----~~~~-~~~Di~~~s~~K-~~g~ 262 (457)
+ +.+|+.+...+.+|.+.|+++|+++|++||+++|+|+|++.+.... .+.. ..+|.+++++|| ++.|
T Consensus 233 ~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P 312 (490)
T PLN02880 233 DLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTN 312 (490)
T ss_pred HHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCC
Confidence 2 5678888888999999999999999999999999999999875532 1232 258999999999 5679
Q ss_pred CCceEEEEecCCCccccccccCCcc-------c---cccccCCCCh---hHHHHHHHHHHH-HHHhhHHHHHHHHHHHHH
Q 040741 263 KGVGALYMRRRPRIRVEPLINGGGQ-------E---RGIRSGTLPT---PLIVGFGSACEI-AKKEMDYDHKRITALHDR 328 (457)
Q Consensus 263 ~G~G~l~~~~~~~~~~~~~~~~~~~-------~---~~~~~~t~~~---~~~~al~~al~~-~~~~~~~~~~~~~~~~~~ 328 (457)
.|+|++++++.. ....+....+.+ . ..+...+... .....+-..++. ..+++.++.++.-+++++
T Consensus 313 ~~~g~llvr~~~-~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~ 391 (490)
T PLN02880 313 FDCSLLWVKDRN-ALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKE 391 (490)
T ss_pred ccEEEEEEeCHH-HHHHHHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 999999999631 111111111100 0 0000001100 001122222322 234577777777799999
Q ss_pred HHHHHhhcCCCeEEeCCCCCcccceEEEEEcccc--c-------hHHHhcc--c-CeEecccCccCCCCCChhHHHHHcC
Q 040741 329 LLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVE--G-------ESLLMGL--K-EVAVSSGSACTSASLEPSYVLRALG 396 (457)
Q Consensus 329 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~l--~-~i~~~~g~~~~~~~~~~~~~l~~~g 396 (457)
+.+.|.+ .++++++.+++ .+++.|.++... . ..+...| . .+.+...
T Consensus 392 ~~~~l~~-~~~~el~~~~~---~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t------------------ 449 (490)
T PLN02880 392 FEQLVAQ-DSRFEVVTPRI---FSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHT------------------ 449 (490)
T ss_pred HHHHHhc-CCCEEEecCCc---eEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEE------------------
Confidence 9999998 89999988654 556677765321 1 1233333 1 2222211
Q ss_pred CCccCCCCeEEEecCCC-CCHHHHHHHHHHHHHHHHHHHh
Q 040741 397 VDEDMAHTSIRFGIGRF-TTEAEVDRAIELTVKQVEKLRE 435 (457)
Q Consensus 397 ~~~~~~~~~iRi~~~~~-~t~edid~~~~~l~~~~~~~~~ 435 (457)
.-.++.++|+++... ++++|++.+++.|.+..+++.+
T Consensus 450 --~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~~ 487 (490)
T PLN02880 450 --VLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLLG 487 (490)
T ss_pred --EECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 112347999998665 5579999999999999888754
No 184
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.94 E-value=3.5e-24 Score=215.13 Aligned_cols=307 Identities=16% Similarity=0.118 Sum_probs=212.9
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC
Q 040741 101 VAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA 180 (457)
Q Consensus 101 ~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~ 180 (457)
..+.++++.++++++.+ ++++|+|||+|+.+++.+++ ++|| |+++++.|.++...+... |.+++.++++.
T Consensus 78 ~g~~~Lreaia~~~~~~--~vv~t~ggt~A~~~~~~all----~pGD-Vii~~p~~~~~~~~i~~~---G~~~v~v~~~~ 147 (460)
T PRK13238 78 RSYYRLEDAVKDIFGYP--YTIPTHQGRAAEQILFPVLI----KKGD-VVPSNYHFDTTRAHIELN---GATAVDLVIDE 147 (460)
T ss_pred CCHHHHHHHHHHHhCCC--cEEECCCHHHHHHHHHHHhC----CCCC-EEccCCcccchHHHHHHc---CCEEEEEeccc
Confidence 46788999999999975 49999999999999999988 8999 989888888777666655 99999998852
Q ss_pred ----------CCCCCHHHHHHhcCC----CceEEEEeccccccc-cccC---hHHHHHHHHhcCCcEEEehhhhcCC---
Q 040741 181 ----------DGIVNLDELRAAIRP----DTGLISVMAVNNEIG-VIQP---MEEIGQICKEFKIPFHTDAAQALGK--- 239 (457)
Q Consensus 181 ----------~~~~d~~~le~~i~~----~t~li~i~~~~~~~G-~~~~---l~~i~~l~~~~~v~li~D~a~~~g~--- 239 (457)
.|.+|+++|+++|++ ++++|++++++|++| .+++ +++|.++|++||+++|.|+++..+.
T Consensus 148 ~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f 227 (460)
T PRK13238 148 ALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYF 227 (460)
T ss_pred cccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhh
Confidence 245999999999984 799999999999997 6766 6789999999999999999885421
Q ss_pred --------CcccCCC------CcccEEEecccc-ccCCCCceEEEEec-CCCccccccccCCccccccccCCCChhHHHH
Q 040741 240 --------IPVDVEK------WNVSLMSLSGHK-IYGPKGVGALYMRR-RPRIRVEPLINGGGQERGIRSGTLPTPLIVG 303 (457)
Q Consensus 240 --------~~~~~~~------~~~Di~~~s~~K-~~g~~G~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a 303 (457)
....+.. ...|++++|++| .+++.| |+++.++ ++.++++....... ....++..+...+.|
T Consensus 228 ~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~G-G~i~~~d~~l~~~~~~~~~~~~--g~~t~~g~~~~~~~A 304 (460)
T PRK13238 228 IKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIG-GLLCFRDEDLFTECRTLCILYE--GFPTYGGLAGRDMEA 304 (460)
T ss_pred hhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcce-eEEEcChHHHHHHhhhcccccC--CcccccCcHHHHHHH
Confidence 1111111 137999999999 677876 8888884 45555544432110 012344555555666
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccc---------cchHHHhcc---c
Q 040741 304 FGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYV---------EGESLLMGL---K 371 (457)
Q Consensus 304 l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l---~ 371 (457)
+..++....+ +...+...++++++.+.|.+ .|+.+..+.. . ..+.+.+... .+.+++..| .
T Consensus 305 la~~l~e~~~--~~~~~~~~~~~~~l~~~L~~--~G~~~~~p~G-g--~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~ 377 (460)
T PRK13238 305 LAVGLYEGMD--EDYLAYRIGQVEYLGEGLEE--AGVPIQTPAG-G--HAVFVDAGKFLPHIPAEQFPAQALACELYLEA 377 (460)
T ss_pred HHhhHHHhhC--hHHHHHHHHHHHHHHHHHHH--CCCCeEccCC-c--eEEEEEchhcCCCCCCCCCchHHHHHHHHHHc
Confidence 6666654333 22233334457889999988 4888776432 2 2233433321 245666666 5
Q ss_pred CeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCC-CCCHHHHHHHHHHHHHHHHHH
Q 040741 372 EVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGR-FTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 372 ~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~-~~t~edid~~~~~l~~~~~~~ 433 (457)
||.+.+++.+..+.-.+ .|.........+||++.. .-|.+++|+++++|++..++-
T Consensus 378 GV~~~~~~~f~~~~~~~------~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~~ 434 (460)
T PRK13238 378 GIRGVEIGSLLLGRDPK------TGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKENR 434 (460)
T ss_pred CeeeecccceecccCCC------CccccCCccceEEEecccccCCHHHHHHHHHHHHHHHHhH
Confidence 89988877654322110 111011124899999987 347899999999999877543
No 185
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.94 E-value=6.2e-24 Score=215.77 Aligned_cols=341 Identities=15% Similarity=0.123 Sum_probs=225.2
Q ss_pred CCCcEEecCCCCCCCCHHHHHHHHHHHhh-------ccCCCCCCccchhhhHHHHHHHHHHHHHHHhC--------CCCC
Q 040741 55 AGRPLYLDMQATTPVDPRVLDAMLPFYLS-------RYGNPHSRTHLFGWESEVAVETARSQIADLIG--------ASPK 119 (457)
Q Consensus 55 ~~~~i~l~~~~~~~~~~~v~~a~~~~~~~-------~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g--------~~~~ 119 (457)
..+.|.|+.+.+..+.+.+.+.+.+.... ....+.. ..|.......++++.+|++++ ++++
T Consensus 45 p~g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~----~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe 120 (496)
T PLN02376 45 PHGIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDI----ANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPE 120 (496)
T ss_pred CCceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchh----hccCCCCCcHHHHHHHHHHHHHHhCCCCcCChh
Confidence 45779999988877666666666654332 0001111 111111234556666666654 6788
Q ss_pred cEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC--CCCCCCHHHHHHhc----
Q 040741 120 EIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG--ADGIVNLDELRAAI---- 193 (457)
Q Consensus 120 ~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~le~~i---- 193 (457)
+|++|+|+++|+.+++.+++ ++||.|+++.+.|+.+...+.. ..|++++.++++ .++.+|++++++++
T Consensus 121 ~Ivit~Ga~~al~~l~~~l~----~pGD~Vlv~~P~Y~~~~~~~~~--~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~ 194 (496)
T PLN02376 121 RVVMSGGATGANETIMFCLA----DPGDVFLIPSPYYAAFDRDLRW--RTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQ 194 (496)
T ss_pred hEEEccchHHHHHHHHHHhC----CCCCEEEECCCCccchHHHHHh--hCCCEEEEEeCCCCccCcCCHHHHHHHHHHHH
Confidence 99999999999999999998 8999999999999999876542 239999999985 34578999987653
Q ss_pred --CCCceEEEEeccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCC----Cccc---C-CC-----Cccc--EEE
Q 040741 194 --RPDTGLISVMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGK----IPVD---V-EK-----WNVS--LMS 253 (457)
Q Consensus 194 --~~~t~li~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~----~~~~---~-~~-----~~~D--i~~ 253 (457)
..++++|++++++||||.+++ +++|+++|++|+++||+|++|+... .... + .. .+.+ +++
T Consensus 195 ~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv 274 (496)
T PLN02376 195 ESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIV 274 (496)
T ss_pred hcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEE
Confidence 246788999999999999999 6678889999999999999997421 1111 1 00 0123 456
Q ss_pred eccccccCCCC--ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHH---HHHhhHHHHHHHHHHHHH
Q 040741 254 LSGHKIYGPKG--VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEI---AKKEMDYDHKRITALHDR 328 (457)
Q Consensus 254 ~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~---~~~~~~~~~~~~~~~~~~ 328 (457)
.|++|.||.+| +|+++..++.+........ ..+..+.....++...++. ....+.+..+++++.++.
T Consensus 275 ~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~--------~~~~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~ 346 (496)
T PLN02376 275 YSLSKDMGLPGFRVGIVYSFNDSVVSCARKMS--------SFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKV 346 (496)
T ss_pred EeccccCCCCcceEEEEEECCHHHHHHHHHHh--------hcCCCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHH
Confidence 89999887555 9999986443322211111 1123344444444444421 122355667778888888
Q ss_pred HHHHHhhcCCCeEEeCCCCCcccceEEEEEcc-cc-------chHHHhcc---cCeEecccCccCCCCCChhHHHHHcCC
Q 040741 329 LLNGIKEKLDGVVVNGSMERRYIGNLNLSFAY-VE-------GESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGV 397 (457)
Q Consensus 329 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~ 397 (457)
+.+.|++ . ++.+..+ +. +.++.+.++. .. ..++...+ .||.+.+|..|...
T Consensus 347 l~~~L~~-~-gi~~~~~-~a--G~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~------------- 408 (496)
T PLN02376 347 FTTGIKK-A-DIACLTS-NA--GLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCT------------- 408 (496)
T ss_pred HHHHHHH-C-CCcccCC-Cc--eEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCC-------------
Confidence 9999988 3 6555432 21 2333444432 11 13444444 48999999765321
Q ss_pred CccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 040741 398 DEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLREM 436 (457)
Q Consensus 398 ~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~~ 436 (457)
..+++||+++. .+++.++..+++|++++++.++.
T Consensus 409 ----~~g~~Ri~fa~-~~~~~l~~al~rl~~~l~~~~~~ 442 (496)
T PLN02376 409 ----EPGWFRICFAN-MDDDTLHVALGRIQDFVSKNKNK 442 (496)
T ss_pred ----CCCEEEEEeeC-CCHHHHHHHHHHHHHHHHHhhhc
Confidence 12799999986 35799999999999999866543
No 186
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=6.7e-25 Score=216.92 Aligned_cols=304 Identities=16% Similarity=0.137 Sum_probs=211.1
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHH-HHhcCcEEE
Q 040741 96 GWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRH-LQQEGFEIT 174 (457)
Q Consensus 96 ~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~-~~~~G~~v~ 174 (457)
++...+...++++.++++.|.+. .+.+++|++|+.+++.++. ++||+|+++.+.|.+....+.. +...|++++
T Consensus 56 ~r~~~p~~~~Le~~lA~~~g~~~--~i~~~sG~~Ai~~~l~all----~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~ 129 (388)
T PRK07811 56 ARTGNPTRTALEEQLAALEGGAY--GRAFSSGMAATDCLLRAVL----RPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYT 129 (388)
T ss_pred cCCCCccHHHHHHHHHHHhCCCc--eEEeCCHHHHHHHHHHHHh----CCCCEEEEcCCCchHHHHHHHHhCcCCCeEEE
Confidence 33344678899999999999875 5666778999999999997 8999999999999877655443 344588888
Q ss_pred EEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEe
Q 040741 175 YLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSL 254 (457)
Q Consensus 175 ~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~ 254 (457)
+++.. |++++++++++++++|++++++||+|.+.++++|.++|+++|+++++|++++.+...... ..++|++++
T Consensus 130 ~~d~~-----d~e~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~p~-~~gaDivv~ 203 (388)
T PRK07811 130 PVDLS-----DLDAVRAAITPRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQPL-ALGADVVVH 203 (388)
T ss_pred EeCCC-----CHHHHHHhcCcCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCCch-hhCCcEEEe
Confidence 87753 899999999999999999999999999999999999999999999999999877543222 357899999
Q ss_pred ccccccCCC-C--ceEEEEecCC-CccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 040741 255 SGHKIYGPK-G--VGALYMRRRP-RIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLL 330 (457)
Q Consensus 255 s~~K~~g~~-G--~G~l~~~~~~-~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~ 330 (457)
|++|++++. + .|+++++++. .+++.......+ ...++.....+... .+.+..++++..+++..+.
T Consensus 204 S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g-------~~~s~~~a~l~~~~----L~tl~~R~~~~~~na~~la 272 (388)
T PRK07811 204 STTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAG-------AVPGPFDAYLTLRG----LKTLAVRMDRHSENAEAVA 272 (388)
T ss_pred cCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcC-------CCCCHHHHHHHHhc----cCcHHHHHHHHHHHHHHHH
Confidence 999976643 2 5888876542 233332221111 12222221111111 1246777888889999999
Q ss_pred HHHhhcCCCeEEeCCCC--------------CcccceEEEEEccc--cchHHHhccc--CeEecccCccC----CCCCCh
Q 040741 331 NGIKEKLDGVVVNGSME--------------RRYIGNLNLSFAYV--EGESLLMGLK--EVAVSSGSACT----SASLEP 388 (457)
Q Consensus 331 ~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~--~~~~~~~~l~--~i~~~~g~~~~----~~~~~~ 388 (457)
+.|++ .|++.-+--|. ..+++++.|.+++- ....++..|+ .++.+-|...+ +....+
T Consensus 273 ~~L~~-~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~ 351 (388)
T PRK07811 273 EFLAG-HPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARDFCARTKVFTLAESLGGVESLIEHPSAMTH 351 (388)
T ss_pred HHHHh-CCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHHHHHhCCcceeeccCCCCcceEeCCcccCc
Confidence 99998 88764321111 13577888888631 2345555553 45555565432 211111
Q ss_pred hH-HHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 389 SY-VLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 389 ~~-~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
.. ..+..|+.+ +.|||+++. ||.+.+++.|+++++
T Consensus 352 ~~~~~~~~gi~~----~liR~svGl----E~~~dl~~dl~~al~ 387 (388)
T PRK07811 352 ASTAGSQLEVPD----DLVRLSVGI----EDVADLLADLEQALG 387 (388)
T ss_pred ccCCHhhcCCCC----CEEEEEeCC----CCHHHHHHHHHHHhh
Confidence 11 112345544 899999997 788888888888875
No 187
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.94 E-value=9.5e-24 Score=207.88 Aligned_cols=318 Identities=15% Similarity=0.111 Sum_probs=220.9
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHH
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVS 134 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~a 134 (457)
++.+.|+.+.+. ++++.+.+++.+.+.....+|. ....++++.++++++++++++++|+|+++++.++
T Consensus 22 ~~~i~l~~~~n~~~~~~~~~~a~~~~~~~~~~Y~~-----------~~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~ 90 (360)
T PRK07392 22 DAILDFSASINPLGPPESVIAAIQSALSALRHYPD-----------PDYRELRLALAQHHQLPPEWILPGNGAAELLTWA 90 (360)
T ss_pred ccEEEeCCcCCCCCCCHHHHHHHHHHHHHhhcCCC-----------cCHHHHHHHHHHHhCcChhhEEECCCHHHHHHHH
Confidence 355788866554 6788999998877654322211 1235899999999999999999999999999998
Q ss_pred HHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCC-----CCHHHHHHhcCCCceEEEEecccccc
Q 040741 135 IKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGI-----VNLDELRAAIRPDTGLISVMAVNNEI 209 (457)
Q Consensus 135 l~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~-----~d~~~le~~i~~~t~li~i~~~~~~~ 209 (457)
+.++. +++.|++..+.|..+...++.. |.+++.++.+.++. .|++++++.. .++++++++++||||
T Consensus 91 ~~~l~-----~g~~vlv~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPT 161 (360)
T PRK07392 91 GRELA-----QLRAVYLITPAFGDYRRALRAF---GATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPT 161 (360)
T ss_pred HHHhC-----CCCeEEEECCCcHHHHHHHHHc---CCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCC
Confidence 88754 4679999999999998887766 99999999874432 4677776654 467899999999999
Q ss_pred ccccChHHHHHHHHhcCCcEEEehhhhcCCCc------cc-CCCCcccEEEeccccccCCCC--ceEEEEecCCCccccc
Q 040741 210 GVIQPMEEIGQICKEFKIPFHTDAAQALGKIP------VD-VEKWNVSLMSLSGHKIYGPKG--VGALYMRRRPRIRVEP 280 (457)
Q Consensus 210 G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~------~~-~~~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~ 280 (457)
|.+.+.++|.++++++++ +++|+++.--... .. +.....-+++.|++|.||.+| +|+++++++.++++..
T Consensus 162 G~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~~~ 240 (360)
T PRK07392 162 GKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRWQQ 240 (360)
T ss_pred CCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHHHh
Confidence 999999999999999986 6669998632111 11 112223478889999887555 9999998766555432
Q ss_pred cccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcc
Q 040741 281 LINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAY 360 (457)
Q Consensus 281 ~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (457)
... ..+.+.....++..+++. ....+...+.++++++++.+.|++ ++++.+.. .. ..++.+.++.
T Consensus 241 ~~~---------~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~-~~~~~~~~--~~--~~fl~~~~~~ 305 (360)
T PRK07392 241 WRD---------PWPVNGLAAAAAIAALAD-RDFQQQTWAWLPPAREALFQGLAS-LPGLTPLP--SA--ANFLLVQSQG 305 (360)
T ss_pred hCC---------CCCCCHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHh-CCCcEECC--CC--CCEEEEEcCC
Confidence 221 124555555555555542 122344556778888889999988 78877643 11 3444444442
Q ss_pred ccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHH
Q 040741 361 VEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 361 ~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~ 430 (457)
+..++...+ .||.+.+|..+.. ...++|||+++. .++.+++.+.+++.+
T Consensus 306 -~~~~l~~~ll~~~gv~v~pg~~f~~-----------------~~~~~iRi~~~~---~~~~~~l~~al~~~~ 357 (360)
T PRK07392 306 -SALQLQEKLLQQHRILIRDCLSFPE-----------------LGDRYFRVAVRT---EAENQRLLEALAAIL 357 (360)
T ss_pred -CHHHHHHHHHhhCCEEEEeCCCCCC-----------------CCCCEEEEEeCC---HHHHHHHHHHHHHHh
Confidence 445665553 5899998865421 123799999985 555666666666544
No 188
>PLN02271 serine hydroxymethyltransferase
Probab=99.93 E-value=7e-24 Score=209.83 Aligned_cols=341 Identities=13% Similarity=0.180 Sum_probs=240.0
Q ss_pred CCCCCCCCHHHHHHHHHHHhhcc--CCCCCCccchhhhHHHHH-HHHHHHHHHHhCCCC----CcEEEeCChHHHHHHHH
Q 040741 63 MQATTPVDPRVLDAMLPFYLSRY--GNPHSRTHLFGWESEVAV-ETARSQIADLIGASP----KEIIFTSGATESNNVSI 135 (457)
Q Consensus 63 ~~~~~~~~~~v~~a~~~~~~~~~--~~p~~~~~~~~~~~~~~~-~~~~~~la~~~g~~~----~~i~~t~g~T~a~~~al 135 (457)
.++.+.+++.+++++...+.+.| |.|..+.| .|....+.+ .-+.++..++||+++ .++..- ||+.|+..++
T Consensus 154 IASEN~~S~av~~algS~ltnkYaEG~pG~Ryy-~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~-SGs~AN~aV~ 231 (586)
T PLN02271 154 IASENFVCRAVMEALGSHLTNKYSEGMPGARYY-TGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPY-SCTSANFAVY 231 (586)
T ss_pred ccccccCCHHHHHHhcCcccccCCCCCCCCcCC-CCChhHHHHHHHHHHHHHHHhCCcccccccceeec-cHHHHHHHHH
Confidence 45566899999999999998876 46665433 343433344 446788888999876 454444 7899999999
Q ss_pred HHhhhhhcCCCCEEEEcCCCCcchHHHHH------HHHhcCcEEE--EEeCC-CCCCCCHHHHHH-hcCCCceEEEEecc
Q 040741 136 KGVMHFYKDKKRHVITTQTEHKCVLDSCR------HLQQEGFEIT--YLPVG-ADGIVNLDELRA-AIRPDTGLISVMAV 205 (457)
Q Consensus 136 ~~~~~~~~~~g~~vi~~~~~h~~~~~~~~------~~~~~G~~v~--~v~~~-~~~~~d~~~le~-~i~~~t~li~i~~~ 205 (457)
.+++ +|||.|+..+.+|.+...... .+...|..+. .++++ .+|.+|++++++ +...++++|++.+.
T Consensus 232 ~ALl----~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~g~S 307 (586)
T PLN02271 232 TGLL----LPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILICGGS 307 (586)
T ss_pred HHhc----CCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEECch
Confidence 9998 999999999988888776532 1122354444 44464 678999999998 77889999999887
Q ss_pred ccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCC---CCcccEEEecccc-ccCCCCceEEEEecCCCcccccc
Q 040741 206 NNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVE---KWNVSLMSLSGHK-IYGPKGVGALYMRRRPRIRVEPL 281 (457)
Q Consensus 206 ~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~---~~~~Di~~~s~~K-~~g~~G~G~l~~~~~~~~~~~~~ 281 (457)
.++ ...|+++|+++|+++|+++++|++|..|.++.+.. ..++|++++|.|| +.||.| |+++.+++........
T Consensus 308 ayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHKtLrGPrG-G~I~~r~~~~~~~~g~ 384 (586)
T PLN02271 308 SYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKSLRGPRG-GIIFYRKGPKLRKQGM 384 (586)
T ss_pred hcc--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeCCcccCCCCCc-eEEEecccccccccCC
Confidence 776 77899999999999999999999999998865432 2258999999999 679998 8888876543333222
Q ss_pred ccCCccc---------------cccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCC
Q 040741 282 INGGGQE---------------RGIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLDGVVVNGS 345 (457)
Q Consensus 282 ~~~~~~~---------------~~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 345 (457)
..+++.. -++..|+++.. ++++..+++.+.. ++....+++.++++.|.+.|.+ .|+.++..
T Consensus 385 ~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~-IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~--~G~~vv~g 461 (586)
T PLN02271 385 LLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNH-IAALAIALKQVATPEYKAYMQQVKKNAQALASALLR--RKCRLVTG 461 (586)
T ss_pred ccccccccccHHHHHHhhcccCCccccChhHHH-HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH--CCCeEeeC
Confidence 2222211 12334455544 8888888887764 5789999999999999999998 58888764
Q ss_pred CCCcccceEEEEEc--cccchHHHhccc--CeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCC----CHH
Q 040741 346 MERRYIGNLNLSFA--YVEGESLLMGLK--EVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFT----TEA 417 (457)
Q Consensus 346 ~~~~~~~~~~~~~~--~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~----t~e 417 (457)
... ...+.+.+. +.++......|+ +|.+........ ......+.|||+....+ .++
T Consensus 462 gTd--nHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d--------------~~~~~psGiRiGT~alT~rG~~e~ 525 (586)
T PLN02271 462 GTD--NHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGD--------------NGTISPGGVRIGTPAMTSRGCLES 525 (586)
T ss_pred CCC--cceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCC--------------CCCCCCCcccccCHHHHhcCCCcH
Confidence 333 233334443 345666555553 555533211100 11233478999976654 468
Q ss_pred HHHHHHHHHHHHHH
Q 040741 418 EVDRAIELTVKQVE 431 (457)
Q Consensus 418 did~~~~~l~~~~~ 431 (457)
|++++.+.|.++++
T Consensus 526 d~~~iA~~i~~~~~ 539 (586)
T PLN02271 526 DFETIADFLLRAAQ 539 (586)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999887
No 189
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.93 E-value=2.2e-24 Score=212.54 Aligned_cols=305 Identities=12% Similarity=0.090 Sum_probs=214.6
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHH-HHhcCcEEE
Q 040741 96 GWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRH-LQQEGFEIT 174 (457)
Q Consensus 96 ~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~-~~~~G~~v~ 174 (457)
++..++...++++.++++.|. +++++++||++|+.+++.++. ++||+|+++.+.|.+....+.. ....|.++.
T Consensus 46 ~R~~~p~~~~le~~lA~l~g~--~~v~~~~gg~~Ai~~~l~all----~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~ 119 (382)
T TIGR02080 46 SRSGNPTRDLLQQALAELEGG--AGAVVTNTGMSAIHLVTTALL----GPDDLLVAPHDCYGGTYRLLNALAKKGCFRVL 119 (382)
T ss_pred cCCCCchHHHHHHHHHHHhCC--CcEEEEcCHHHHHHHHHHHHc----CCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEE
Confidence 333446788999999999995 459999999999999999987 8999999999999877665544 344567887
Q ss_pred EEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEe
Q 040741 175 YLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSL 254 (457)
Q Consensus 175 ~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~ 254 (457)
.++. .|++++++++++++++|++++++||+|.+.|+++|.++|+++|+++++|++++.+...... ..++|+++.
T Consensus 120 ~~d~-----~d~~~l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~pl-~~gaDivv~ 193 (382)
T TIGR02080 120 FVDQ-----GDEQALRAALAQKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQNPL-ALGADLVLH 193 (382)
T ss_pred EECC-----CCHHHHHHhcCcCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccCCch-hhCCCEEEe
Confidence 7753 2899999999999999999999999999999999999999999999999999866432222 347899999
Q ss_pred cccccc-CCCC--ceEEEEecC-CCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 040741 255 SGHKIY-GPKG--VGALYMRRR-PRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLL 330 (457)
Q Consensus 255 s~~K~~-g~~G--~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~ 330 (457)
|++|++ |+.+ .|++++++. ..+++....... ..+.++.....+...+ +.+..++++..+++..+.
T Consensus 194 S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~-------g~~~sp~~a~l~lr~l----~tl~~R~~~~~~na~~~a 262 (382)
T TIGR02080 194 SCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNL-------GVTGGAFDSYLTLRGL----RTLVARMRLQQRNAQAIV 262 (382)
T ss_pred ecceeccCCCCceeEEEEeCCHHHHHHHHHHHHcc-------CCCCCHHHHHHHHccc----chHHHHHHHHHHHHHHHH
Confidence 999955 4555 687777543 333333222111 1133333333222222 245666788889999999
Q ss_pred HHHhhcCCCeEE-eCC--CC-----------CcccceEEEEEccc-c-chHHHhccc--CeEecccCccC----CCCCCh
Q 040741 331 NGIKEKLDGVVV-NGS--ME-----------RRYIGNLNLSFAYV-E-GESLLMGLK--EVAVSSGSACT----SASLEP 388 (457)
Q Consensus 331 ~~l~~~~~~~~~-~~~--~~-----------~~~~~~~~~~~~~~-~-~~~~~~~l~--~i~~~~g~~~~----~~~~~~ 388 (457)
+.|++ .|.+.- +-+ +. ...++++.|.+++- + ...++..|+ .++++-|...+ +....+
T Consensus 263 ~~L~~-~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~ 341 (382)
T TIGR02080 263 EYLQT-QPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGEQTVRRFLGGLSLFTLAESLGGVESLIAHPATMTH 341 (382)
T ss_pred HHHHh-CCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcHHHHHHHHHcCCcceEeccCCCCcceeECCCccCc
Confidence 99998 777642 221 11 23577888888631 1 235566663 55666665432 222211
Q ss_pred ----hHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 389 ----SYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 389 ----~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
.-.....|+.+ +.|||+++. ||+|.+++.|++++++
T Consensus 342 ~~~~~~~~~~~gi~~----~liRlsvGl----E~~~dl~~dl~~al~~ 381 (382)
T TIGR02080 342 AAMGPEARAEAGISD----TLLRLSVGL----EDADDLIADLEQGLRA 381 (382)
T ss_pred ccCCHHHHHhcCCCc----CeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 12234567665 899999996 7888899999888763
No 190
>PRK06855 aminotransferase; Validated
Probab=99.93 E-value=4e-24 Score=215.07 Aligned_cols=333 Identities=15% Similarity=0.164 Sum_probs=216.5
Q ss_pred cEEecCCCC----CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh----C--CCCCcEEEeCCh
Q 040741 58 PLYLDMQAT----TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI----G--ASPKEIIFTSGA 127 (457)
Q Consensus 58 ~i~l~~~~~----~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~----g--~~~~~i~~t~g~ 127 (457)
.++|..+.+ -++|+.+.+++.+.+... . .++|.......++|+.+++++ | +++++|++|+|+
T Consensus 34 ~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~----~----~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~ 105 (433)
T PRK06855 34 ITWENIGDPIAKGEKIPDWMKEIVAELVMDD----K----SYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGL 105 (433)
T ss_pred ccccccCCCcccCCCCCHHHHHHHHHHhhcC----C----CCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcH
Confidence 355554444 267788888888876431 0 111222234456666666665 4 567889999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC--CCCCCHHHHHHhcC--CCceEEEEe
Q 040741 128 TESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA--DGIVNLDELRAAIR--PDTGLISVM 203 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~le~~i~--~~t~li~i~ 203 (457)
++|+.+++. ++ ++||.|++..+.|+.+..... ...|++++.++.+. +..+|+++|+++++ +++++++++
T Consensus 106 ~~al~~~~~-l~----~~Gd~Vlv~~P~Y~~~~~~~~--~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~ 178 (433)
T PRK06855 106 GDAIAKIYG-LL----RREARVIGPSPAYSTHSSAEA--AHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLI 178 (433)
T ss_pred HHHHHHHHH-hc----CCCCeEEEeCCCCchHHHHHH--HhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEE
Confidence 999998874 66 799999999999998654322 22388888888763 34689999999996 467888999
Q ss_pred ccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCCC----ccc---CCCCcccEEEeccccccCCCC--ceEEEEe
Q 040741 204 AVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKI----PVD---VEKWNVSLMSLSGHKIYGPKG--VGALYMR 271 (457)
Q Consensus 204 ~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~----~~~---~~~~~~Di~~~s~~K~~g~~G--~G~l~~~ 271 (457)
+++||||.+.+ +++|+++|++||++||+|++|+--.. ... +...+..+++.|++|.++.+| +||+++.
T Consensus 179 ~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p 258 (433)
T PRK06855 179 NPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVY 258 (433)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEe
Confidence 99999999998 56788889999999999999863211 111 111112478899999877555 9999984
Q ss_pred cCC----CccccccccCCccccccccCCCChhHHHHHHHHHHH--HHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCC
Q 040741 272 RRP----RIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEI--AKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGS 345 (457)
Q Consensus 272 ~~~----~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 345 (457)
+.. +.++....... ..... .++.....++..+++. ..+.+++.++.++++++.+.+.|.+ ++++.+..+
T Consensus 259 ~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~-~~~~~~~~p 333 (433)
T PRK06855 259 NADKDEVFKKYINSILNA---KMIEV-CSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKD-VPGLKVNRT 333 (433)
T ss_pred CCchhhHHHHHHHHHHHh---hcccc-CCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeeccCC
Confidence 311 01111111000 00111 2344444444445432 1334777888889999999999988 777665432
Q ss_pred CCCcccceEEEEEccc----------------------------cchHHHhcc---cCeEecccCccCCCCCChhHHHHH
Q 040741 346 MERRYIGNLNLSFAYV----------------------------EGESLLMGL---KEVAVSSGSACTSASLEPSYVLRA 394 (457)
Q Consensus 346 ~~~~~~~~~~~~~~~~----------------------------~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~ 394 (457)
+. +.++.+.++.. ++.++...+ .||.+.+|..+..
T Consensus 334 -~g--g~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~----------- 399 (433)
T PRK06855 334 -NG--AFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCT----------- 399 (433)
T ss_pred -Ce--eEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCC-----------
Confidence 22 22333333321 123344332 6999999976532
Q ss_pred cCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 395 LGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 395 ~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
....+||+++. .+.++++..+++|.+++++
T Consensus 400 -------~~~~~Rls~~~-~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 400 -------ELNGFRVTLLE-RDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred -------CCCceEEEECC-CcHHHHHHHHHHHHHHHHH
Confidence 01459999987 4689999999999999875
No 191
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.93 E-value=4.6e-24 Score=207.49 Aligned_cols=326 Identities=14% Similarity=0.070 Sum_probs=237.5
Q ss_pred CCCCCCHH-HHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCc--EEEeCChHHHHHHHHHHhhhh
Q 040741 65 ATTPVDPR-VLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKE--IIFTSGATESNNVSIKGVMHF 141 (457)
Q Consensus 65 ~~~~~~~~-v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~--i~~t~g~T~a~~~al~~~~~~ 141 (457)
|+..+.|. .++++.+..- +.+| .+..+.+.+.++++.|.++++.+.+. +++++|||.++++++.++..
T Consensus 10 gp~~~~~~~~~~~~~~~~~---~~~H-----Rs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~- 80 (374)
T TIGR01365 10 GPCAKRPGWSIEELKNAPL---GRSH-----RSKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLG- 80 (374)
T ss_pred CccCCCchhhHHHHhhhhc---ccCc-----CCHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCC-
Confidence 44445555 6666665432 2222 25677799999999999999974332 67799999999999999883
Q ss_pred hcCCCCEEEEcCCCCcchHHHHHHHHhcCc-EEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHH
Q 040741 142 YKDKKRHVITTQTEHKCVLDSCRHLQQEGF-EITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQ 220 (457)
Q Consensus 142 ~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~-~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~ 220 (457)
++|+++++.. ..+-....+.++..|+ ++..++.+.+..+|+++++. +. -|+++|..+.||+..|++++..
T Consensus 81 --~~g~~vLv~g--~FG~r~~~eia~~~g~~~v~~l~~~~g~~~~~~~ve~----~~-~v~~vhnETSTGv~npv~~i~~ 151 (374)
T TIGR01365 81 --CRGVDVLAWE--SFGKGWVTDVTKQLKLPDVRVLEAEYGKLPDLKKVDF----KN-DVVFTWNGTTSGVRVPNGDFIP 151 (374)
T ss_pred --CCCCeEEEEC--HHHHHHHHHHHHhcCCCCcEEEcCCCCCCCCHHHcCC----CC-CEEEecCCCchheecccccccc
Confidence 3788888754 3333323355566799 58888888888899999973 12 2678999999999999976663
Q ss_pred HHHhcCCcEEEehhhhcCCCcccCCCCcccEEEecccc-ccCCCCceEEEEecCCCcccccc--------ccCCcc----
Q 040741 221 ICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHK-IYGPKGVGALYMRRRPRIRVEPL--------INGGGQ---- 287 (457)
Q Consensus 221 l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K-~~g~~G~G~l~~~~~~~~~~~~~--------~~~~~~---- 287 (457)
.+ +++++++|++.++|+.+++++. +|+++.+.+| +.+|+|+++++++++..++.... +.....
T Consensus 152 ~~--~~~lliVDavSs~g~~~l~~d~--iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~ 227 (374)
T TIGR01365 152 AD--REGLTICDATSAAFAQDLDYHK--LDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKL 227 (374)
T ss_pred cc--CCCcEEEEccchhcCCCCChhH--CcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCCCCChhhhccccccch
Confidence 22 5899999999999999999884 9999999999 55688999999999877654321 111000
Q ss_pred ----ccccccCCCChhHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCC-CCCcccceEEEEEcc
Q 040741 288 ----ERGIRSGTLPTPLIVGFGSACEIAKK--EMDYDHKRITALHDRLLNGIKEKLDGVVVNGS-MERRYIGNLNLSFAY 360 (457)
Q Consensus 288 ----~~~~~~~t~~~~~~~al~~al~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 360 (457)
..+....||++..+.++..+++.+++ +++.+.++++++++.+++++++ +..+.++.. +..+.+.++.+.++.
T Consensus 228 ~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~-lg~l~~~~~~~~~rS~tvt~v~~~~ 306 (374)
T TIGR01365 228 NKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAK-NNWIHFLAETPEIRSNTSVCLKVVD 306 (374)
T ss_pred hhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHH-CCCcccCCCChhhcCCCeEEEEeCC
Confidence 11334557777777777777877665 5999999999999999999999 644777653 334556666666633
Q ss_pred --c-----c-----chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHH
Q 040741 361 --V-----E-----GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELT 426 (457)
Q Consensus 361 --~-----~-----~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l 426 (457)
+ + ..++...+ +||.+.+|... ..+..+||+....++.+||+.+++.|
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~-------------------~~~~~fRIg~~G~i~~~di~~l~~~l 367 (374)
T TIGR01365 307 PAIDALDEDAQADFAKELISTLEKEGVAYDIGSYR-------------------DAPSGLRIWCGATVEKSDLECLCPWL 367 (374)
T ss_pred ccccccccchhhHHHHHHHHHHHHCCEEEeccccc-------------------cCCCceEEecCCcCCHHHHHHHHHHH
Confidence 2 1 34555555 68888766421 12378999999999999999999999
Q ss_pred HHHHHH
Q 040741 427 VKQVEK 432 (457)
Q Consensus 427 ~~~~~~ 432 (457)
.-+.++
T Consensus 368 ~~~~~~ 373 (374)
T TIGR01365 368 DWAFAL 373 (374)
T ss_pred HHHHhc
Confidence 877653
No 192
>PLN02590 probable tyrosine decarboxylase
Probab=99.93 E-value=2.4e-23 Score=210.41 Aligned_cols=349 Identities=15% Similarity=0.135 Sum_probs=235.5
Q ss_pred CCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCC-------CcEEEeCChH
Q 040741 56 GRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASP-------KEIIFTSGAT 128 (457)
Q Consensus 56 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~-------~~i~~t~g~T 128 (457)
.++-|+.+-..+..++.++-.+..... |+....+..+....+.-..+.+++++++|.++ ...+|++|||
T Consensus 129 ~hP~f~a~~~~~~~~~~~lgd~l~sa~----n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgS 204 (539)
T PLN02590 129 QSPSYFAYYASSTSVAGFLGEMLNAGL----SVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGC 204 (539)
T ss_pred CCCCeeEeccCCCcHHHHHHHHHHHhc----ccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchH
Confidence 566788886666666666555444332 22222444455566777789999999999975 3489999999
Q ss_pred HHHHHHHHHhhhhhc-------CCCCEEEEcCCCCcchHHHHHHHHhcCc---EEEEEeCC--CCCCCCHHHHHHhcCCC
Q 040741 129 ESNNVSIKGVMHFYK-------DKKRHVITTQTEHKCVLDSCRHLQQEGF---EITYLPVG--ADGIVNLDELRAAIRPD 196 (457)
Q Consensus 129 ~a~~~al~~~~~~~~-------~~g~~vi~~~~~h~~~~~~~~~~~~~G~---~v~~v~~~--~~~~~d~~~le~~i~~~ 196 (457)
+|+..++.+.+.... .++-.|++++..|.|+.++++.+ |+ +++.||++ .++.+|+++|+++|+++
T Consensus 205 eAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~il---Glg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d 281 (539)
T PLN02590 205 EAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIG---GIHEENIRLLKTDSSTNYGMPPESLEEAISHD 281 (539)
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHc---CCCcccEEEEeCCCCCCCcCCHHHHHHHHHHH
Confidence 999999888764321 12235667888999999999998 65 68888887 45799999999999653
Q ss_pred ------ceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCccc-----CCC-CcccEEEeccccc-cCCC
Q 040741 197 ------TGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVD-----VEK-WNVSLMSLSGHKI-YGPK 263 (457)
Q Consensus 197 ------t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~-----~~~-~~~Di~~~s~~K~-~g~~ 263 (457)
+.+|+.+...+.+|.+.|+++|+++|++||+++|+|+|++....... +.. ..+|.+++++||+ +.|.
T Consensus 282 ~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~ 361 (539)
T PLN02590 282 LAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQ 361 (539)
T ss_pred HhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCc
Confidence 56888888989999999999999999999999999999987654321 111 1479999999995 6688
Q ss_pred CceEEEEecCCC--ccc---cccccCC----ccccccccCCCCh---hHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHH
Q 040741 264 GVGALYMRRRPR--IRV---EPLINGG----GQERGIRSGTLPT---PLIVGFGSACEI-AKKEMDYDHKRITALHDRLL 330 (457)
Q Consensus 264 G~G~l~~~~~~~--~~~---~~~~~~~----~~~~~~~~~t~~~---~~~~al~~al~~-~~~~~~~~~~~~~~~~~~l~ 330 (457)
+||+++++++.. ..+ .+++... +....+...++.. .....+-.+++. ..+++.++.++.-++++++.
T Consensus 362 ~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~ 441 (539)
T PLN02590 362 TCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFE 441 (539)
T ss_pred CEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999997521 111 1111100 0000000001110 122223334443 34579999999999999999
Q ss_pred HHHhhcCCCeEEeCCCCCcccceEEEEEccc--cc---h----HHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCc
Q 040741 331 NGIKEKLDGVVVNGSMERRYIGNLNLSFAYV--EG---E----SLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDE 399 (457)
Q Consensus 331 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~----~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~ 399 (457)
+.|++ .++++++.++. .+++.|++... +. . .+...+ .|.+..+. ..
T Consensus 442 ~~l~~-~~~fel~~~~~---l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~-------------------t~ 498 (539)
T PLN02590 442 DYVAQ-DPSFEVVTTRY---FSLVCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFISH-------------------TA 498 (539)
T ss_pred HHHhc-CCCeEEecCCc---eEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEe-------------------eE
Confidence 99999 89999987643 56666666431 11 2 222232 23222111 11
Q ss_pred cCCCCeEEEec-CCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 400 DMAHTSIRFGI-GRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 400 ~~~~~~iRi~~-~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
-.+...||+++ +..++++||+.+++.|.+..+++.
T Consensus 499 ~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~ 534 (539)
T PLN02590 499 LSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFT 534 (539)
T ss_pred ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 12346899997 556889999999999999877653
No 193
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=3.2e-24 Score=211.41 Aligned_cols=308 Identities=13% Similarity=0.081 Sum_probs=217.3
Q ss_pred chhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHH-HhcCcE
Q 040741 94 LFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHL-QQEGFE 172 (457)
Q Consensus 94 ~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~-~~~G~~ 172 (457)
.|++..++....+++++|++.|.+ ++++++||++|+.+++.++. ++||+|+++.+.|++....+... ...|.+
T Consensus 45 ~Y~R~~~pt~~~L~~~lA~l~g~~--~~i~~~sg~~Ai~~~l~~l~----~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~ 118 (386)
T PRK08045 45 DYSRRGNPTRDVVQRALAELEGGA--GAVLTNTGMSAIHLVTTVFL----KPGDLLVAPHDCYGGSYRLFDSLAKRGCYR 118 (386)
T ss_pred eeeCCCCccHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHHc----CCCCEEEEcCCCcHHHHHHHHHHHhhCCeE
Confidence 344444567889999999999964 49999999999999999888 89999999999999766554433 344667
Q ss_pred EEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEE
Q 040741 173 ITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLM 252 (457)
Q Consensus 173 v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~ 252 (457)
+.+++. .|++++++++++++++|++++++||+|.+.|+++|.++|+++|+++++|++++.+..... ...++|++
T Consensus 119 v~~vd~-----~d~e~l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~~p-l~~gaDiv 192 (386)
T PRK08045 119 VLFVDQ-----GDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQNP-LALGADLV 192 (386)
T ss_pred EEEeCC-----CCHHHHHHhcccCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCCc-hhhCCCEE
Confidence 777652 489999999999999999999999999999999999999999999999999987654322 24578999
Q ss_pred Eecccccc-CCCC--ceEEEEec-CCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 040741 253 SLSGHKIY-GPKG--VGALYMRR-RPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDR 328 (457)
Q Consensus 253 ~~s~~K~~-g~~G--~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~ 328 (457)
+.|++|++ |+.+ .|+++.++ +..+++...... ...+.++.....+..++ +.+..++++..+++..
T Consensus 193 v~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~-------~g~~~~p~~~~l~~rgl----~tl~~R~~~~~~na~~ 261 (386)
T PRK08045 193 LHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANN-------IGVTGGAFDSYLLLRGL----RTLVPRMELAQRNAQA 261 (386)
T ss_pred EeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHh-------cCCCCCHHHHHHHHhhh----ccHHHHHHHHHHHHHH
Confidence 99999955 5554 67777643 332333211111 11234444333333333 2478888999999999
Q ss_pred HHHHHhhcCCCeEEe-CC--CC-----------CcccceEEEEEccc-c-chHHHhccc--CeEecccCccC----CCCC
Q 040741 329 LLNGIKEKLDGVVVN-GS--ME-----------RRYIGNLNLSFAYV-E-GESLLMGLK--EVAVSSGSACT----SASL 386 (457)
Q Consensus 329 l~~~l~~~~~~~~~~-~~--~~-----------~~~~~~~~~~~~~~-~-~~~~~~~l~--~i~~~~g~~~~----~~~~ 386 (457)
+.+.|++ .|.+.-+ -+ +. ...++++.|.+++- + ...++..|+ .++++-|...+ +...
T Consensus 262 la~~L~~-~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~ 340 (386)
T PRK08045 262 IVKYLQT-QPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVESLISHAATM 340 (386)
T ss_pred HHHHHHc-CCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhccceeEeccCCCCceeEeCCCCc
Confidence 9999999 7876432 11 11 13577888888631 1 245666664 44555565432 2222
Q ss_pred Ch----hHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 387 EP----SYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 387 ~~----~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
.+ .-.....|+.+ +.|||+++. ||+|.+++.|+++++..
T Consensus 341 ~~~~~~~~~~~~~gi~~----~liR~svGl----E~~~dl~~dl~~al~~~ 383 (386)
T PRK08045 341 THAGMAPEARAAAGISE----TLLRISTGI----EDGEDLIADLENGFRAA 383 (386)
T ss_pred ccccCCHHHHHhcCCCC----CeEEEEeCc----CCHHHHHHHHHHHHHHh
Confidence 11 11233566664 899999997 78888888888888754
No 194
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.93 E-value=4.5e-24 Score=212.96 Aligned_cols=337 Identities=15% Similarity=0.184 Sum_probs=221.2
Q ss_pred CCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHH----HHHHHhCCCCCcE-EEeCChHHHHHHHHHH
Q 040741 63 MQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARS----QIADLIGASPKEI-IFTSGATESNNVSIKG 137 (457)
Q Consensus 63 ~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~----~la~~~g~~~~~i-~~t~g~T~a~~~al~~ 137 (457)
+++.+.++|++++++...+.+.|+....++..++ + .+.+.++++ .+++++|.+. + ++++||+.|+..++.+
T Consensus 34 ~~sen~~~p~v~~a~~~~~~~~~~~g~~gsr~~~-G-~~~~~~lE~~~~~~la~l~g~~~--alv~~~SG~~A~~~~l~a 109 (416)
T PRK13034 34 IASENFTSPAVMEAQGSVLTNKYAEGYPGKRYYG-G-CEFVDEVEALAIERAKQLFGCDY--ANVQPHSGSQANGAVYLA 109 (416)
T ss_pred cccccCCCHHHHHHhcchhhcCCCCCCCCCcccC-C-ChHHHHHHHHHHHHHHHHhCCCc--eEEecCCcHHHHHHHHHH
Confidence 4566788999999999997555553222222221 1 255677777 9999999874 5 5678999999999999
Q ss_pred hhhhhcCCCCEEEEcCCCCcch-HHHHHHHHhcCcEE--EEEeCC-CCCCCCHHHHHHhcCC-CceEEEEeccccccccc
Q 040741 138 VMHFYKDKKRHVITTQTEHKCV-LDSCRHLQQEGFEI--TYLPVG-ADGIVNLDELRAAIRP-DTGLISVMAVNNEIGVI 212 (457)
Q Consensus 138 ~~~~~~~~g~~vi~~~~~h~~~-~~~~~~~~~~G~~v--~~v~~~-~~~~~d~~~le~~i~~-~t~li~i~~~~~~~G~~ 212 (457)
+. ++||+|+++...|.+. ...++.. ..+... ..++++ .++.+|++++++.++. ++++|+++.. .+|..
T Consensus 110 l~----~~GD~Vl~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~--~~g~~ 182 (416)
T PRK13034 110 LL----KPGDTILGMSLSHGGHLTHGAKVS-LSGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFS--AYPRE 182 (416)
T ss_pred hc----CCCCEEEEcCccceeeeecCCcce-eccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCC--ccccc
Confidence 98 8999999999999883 3222211 012222 345554 3466899999998853 6788877543 36888
Q ss_pred cChHHHHHHHHhcCCcEEEehhhhcCCCcccCCC---CcccEEEecccccc-CCCCceEEEEecCCC-ccccccccCCcc
Q 040741 213 QPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEK---WNVSLMSLSGHKIY-GPKGVGALYMRRRPR-IRVEPLINGGGQ 287 (457)
Q Consensus 213 ~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~---~~~Di~~~s~~K~~-g~~G~G~l~~~~~~~-~~~~~~~~~~~~ 287 (457)
.|+++|.++|++||+++++|+||++|....+... .++|++++|+||++ ||.| |+++.+++.. .+++.....+
T Consensus 183 ~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~~~~~~~~~~~~-- 259 (416)
T PRK13034 183 LDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTLRGPRG-GMILTNDEEIAKKINSAVFPG-- 259 (416)
T ss_pred cCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccCCCCCC-eEEEECcHHHHHHHHhhcCCc--
Confidence 8999999999999999999999998866433211 25899999999966 6776 7777665432 2233322111
Q ss_pred ccccccCCCChhHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcc--ccch
Q 040741 288 ERGIRSGTLPTPLIVGFGSACEIAK-KEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAY--VEGE 364 (457)
Q Consensus 288 ~~~~~~~t~~~~~~~al~~al~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 364 (457)
.. +.+.++..+++..++.... .+..+..++..++++++++.|.+ . |+.+..+. . -.+.+.+.+.. ....
T Consensus 260 ---~~-~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~-~-G~~~~~~~-~-~t~i~~v~~~~~~~~~~ 331 (416)
T PRK13034 260 ---LQ-GGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKE-R-GYDLVSGG-T-DNHLLLVDLRPKGLSGK 331 (416)
T ss_pred ---cc-CCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHH-c-CCEeccCC-C-CCcEEEEEcCCCCCCHH
Confidence 11 1233444454444444443 23456679999999999999998 5 88776421 1 13444555542 2334
Q ss_pred HHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCC----CCCHHHHHHHHHHHHHHHHHHH
Q 040741 365 SLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGR----FTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 365 ~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~----~~t~edid~~~~~l~~~~~~~~ 434 (457)
.+...| +||.+..-.... ...+......||++++. .++++||+++++.|++++....
T Consensus 332 ~~~~~L~~~GI~v~~~~~p~-------------~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~~~ 394 (416)
T PRK13034 332 DAEQALERAGITVNKNTVPG-------------DTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLDDLG 394 (416)
T ss_pred HHHHHHHhCCcEEeccCCCC-------------CCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhcCC
Confidence 444555 477665311000 00111123689999887 5679999999999999987543
No 195
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.93 E-value=1.1e-23 Score=199.16 Aligned_cols=338 Identities=17% Similarity=0.173 Sum_probs=231.0
Q ss_pred cccccCCCcEEecCCCCC------CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEE
Q 040741 50 KGVRIAGRPLYLDMQATT------PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIF 123 (457)
Q Consensus 50 ~~~~~~~~~i~l~~~~~~------~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~ 123 (457)
..+....+.-|||+.+.- ..+|.+.+++.+...+.+--+ ..-..+...++.+.|++..+ ..+.++|
T Consensus 34 ~~v~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~s-------n~~~~~~~~~la~~L~~~s~-~~d~vff 105 (404)
T COG4992 34 AYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVS-------NLFYNEPQAELAEKLVELSP-FADRVFF 105 (404)
T ss_pred cEEECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcc-------cccCChHHHHHHHHHHhhCc-cccEEEE
Confidence 344556677789866543 578999999999988764211 11223677888899999987 5667999
Q ss_pred eCChHHHHHHHHHHhhhhhc-CCCCEEEEcCCCCcchHHHHHHH-H----hcCc-----EEEEEeCCCCCCCCHHHHHHh
Q 040741 124 TSGATESNNVSIKGVMHFYK-DKKRHVITTQTEHKCVLDSCRHL-Q----QEGF-----EITYLPVGADGIVNLDELRAA 192 (457)
Q Consensus 124 t~g~T~a~~~al~~~~~~~~-~~g~~vi~~~~~h~~~~~~~~~~-~----~~G~-----~v~~v~~~~~~~~d~~~le~~ 192 (457)
++|||||++.|++..+.+.. ..+.+||.....|.+.....-.+ . +.++ .++++|.+ |+++++++
T Consensus 106 ~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn-----Di~al~~a 180 (404)
T COG4992 106 CNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN-----DIEALEAA 180 (404)
T ss_pred cCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC-----CHHHHHHH
Confidence 99999999999999887654 22446666555544443332222 1 1122 13334433 99999999
Q ss_pred cCCCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhhc-CCC--cc--cCCCCcccEEEecccc-ccCC
Q 040741 193 IRPDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQAL-GKI--PV--DVEKWNVSLMSLSGHK-IYGP 262 (457)
Q Consensus 193 i~~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~~-g~~--~~--~~~~~~~Di~~~s~~K-~~g~ 262 (457)
|+++|..|+++.++...|++.| ++++.++|++||+++|.|++|.. |.. .+ ......+||++.. | +.|.
T Consensus 181 i~~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~tla--K~LgGG 258 (404)
T COG4992 181 IDEDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILTLA--KALGGG 258 (404)
T ss_pred hccCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEEEee--ccccCC
Confidence 9999999999999999999977 88999999999999999999964 211 11 1122347999887 9 5555
Q ss_pred CCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEE
Q 040741 263 KGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVV 342 (457)
Q Consensus 263 ~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 342 (457)
..+|+++.++.....+.+-.+|... -.|+..+++..++++.+.+ +...++.+++.+++.+.|.+....+.+
T Consensus 259 ~PigA~la~~~~~~~~~~G~HgSTf-------GGNpLacAv~~a~l~~l~~--e~ll~~v~~~g~~~~~~L~~l~~~~~~ 329 (404)
T COG4992 259 FPIGAMLATEEIASAFTPGDHGSTF-------GGNPLACAVALAVLEVLLE--EGLLENVREKGEYLLQRLRELKRRYPL 329 (404)
T ss_pred ccceeeEEchhhhhcCCCCcccCCC-------CcCHHHHHHHHHHHHHHcc--hhHHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 5699999985444555555544221 3466677777778888876 666777777777887777762111111
Q ss_pred eCCCCCcccceEEEEEccc-cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHH
Q 040741 343 NGSMERRYIGNLNLSFAYV-EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEV 419 (457)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edi 419 (457)
+. .....+-++-+.+... ...++...+ +|+.+.... .+.|||.++..+++|||
T Consensus 330 v~-~vRG~GLmiGiel~~~~~a~~~~~~~~~~gvL~~~a~-----------------------~~ViR~~PpL~i~~eei 385 (404)
T COG4992 330 VK-EVRGRGLMIGIELKEPYRARDIVRALREEGVLVLPAG-----------------------PNVIRFLPPLVITEEEI 385 (404)
T ss_pred ee-eeecceeEEEEEecCcccHHHHHHHHHHCCeEEecCC-----------------------CCeEEecCCccCCHHHH
Confidence 11 1122244444555432 245666666 576664321 27999999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 040741 420 DRAIELTVKQVEKLRE 435 (457)
Q Consensus 420 d~~~~~l~~~~~~~~~ 435 (457)
|.++++++++++....
T Consensus 386 ~~~~~~l~~~l~~~~~ 401 (404)
T COG4992 386 DEALDALERALAAASA 401 (404)
T ss_pred HHHHHHHHHHHHHhhh
Confidence 9999999999987643
No 196
>PRK05939 hypothetical protein; Provisional
Probab=99.93 E-value=3.2e-24 Score=212.00 Aligned_cols=314 Identities=17% Similarity=0.151 Sum_probs=213.6
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcE
Q 040741 93 HLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFE 172 (457)
Q Consensus 93 ~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~ 172 (457)
+.|++...+....+++.++++.|.+. .+.+++|+.|+..++.++. ++||+|+++...|++.......+...|++
T Consensus 39 ~~Y~r~g~p~~~~lE~~la~leg~~~--~v~~ssG~~Ai~~~l~all----~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~ 112 (397)
T PRK05939 39 FTYARQGTPTTAALEAKITKMEGGVG--TVCFATGMAAIAAVFLTLL----RAGDHLVSSQFLFGNTNSLFGTLRGLGVE 112 (397)
T ss_pred CCcCCCCCHHHHHHHHHHHHHhCCCe--EEEeCCHHHHHHHHHHHHc----CCCCEEEECCCccccHHHHHHHHHhcCCE
Confidence 34444445789999999999999865 6677778999999999887 89999999999998876655556667999
Q ss_pred EEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEE
Q 040741 173 ITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLM 252 (457)
Q Consensus 173 v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~ 252 (457)
+++++.. |+++++++++++|++|++++++||+|.+.|+++|+++|+++|+++++|++++.+. .++....++|++
T Consensus 113 v~~v~~~-----d~e~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~-~~~~~~~gaDiv 186 (397)
T PRK05939 113 VTMVDAT-----DVQNVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPW-LFRPKDVGASLV 186 (397)
T ss_pred EEEECCC-----CHHHHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCccccc-ccCccccCCEEE
Confidence 9999864 8999999999999999999999999999999999999999999999999998764 345556689999
Q ss_pred EeccccccCCCC--ceEEEEecCCCcc-----ccccccCCc-----c--cc----ccccCCCChhHHHHHHHHHHHHHHh
Q 040741 253 SLSGHKIYGPKG--VGALYMRRRPRIR-----VEPLINGGG-----Q--ER----GIRSGTLPTPLIVGFGSACEIAKKE 314 (457)
Q Consensus 253 ~~s~~K~~g~~G--~G~l~~~~~~~~~-----~~~~~~~~~-----~--~~----~~~~~t~~~~~~~al~~al~~~~~~ 314 (457)
+.|++|++++.| +|.+++.+..... +........ . .+ ....+..++.....+.. -.+.
T Consensus 187 v~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~r----gl~t 262 (397)
T PRK05939 187 INSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHRIAI----GAET 262 (397)
T ss_pred EecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHHHHHHc----CcCc
Confidence 999999776544 4555554322111 000000000 0 00 00111222222221111 1134
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCC--------------CcccceEEEEEccc-cchHHHhccc--CeEecc
Q 040741 315 MDYDHKRITALHDRLLNGIKEKLDGVVVNGSME--------------RRYIGNLNLSFAYV-EGESLLMGLK--EVAVSS 377 (457)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~-~~~~~~~~l~--~i~~~~ 377 (457)
+.-++++..+++..+.+.|++ .|.+.-+.-|. ...++++.|.+.+. +...++..++ ..+.+-
T Consensus 263 l~~R~~~~~~na~~la~~L~~-~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~~~~~~~f~~~l~l~~~~~s~ 341 (397)
T PRK05939 263 LALRVDRSCSNALALAQFLEA-HPKVARVYYPGLASHPQHARATELFRHYGGLLSFELADGIDCFDFLNRLKLVIKATHL 341 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-CCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCCHHHHHHHHHhCCcceEccCC
Confidence 677788888899999999998 77653221111 24577787887632 2234555553 344444
Q ss_pred cCccC----CCCCCh----hHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 378 GSACT----SASLEP----SYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 378 g~~~~----~~~~~~----~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
|...+ +....+ .-.....|+.+ +.|||+++. ||+|.+++.|+++++
T Consensus 342 G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~----~lvR~svGl----Ed~~dLi~dl~~Al~ 395 (397)
T PRK05939 342 GDTRTLVIPVAPTIYYEMGAERRASMGIAD----SLIRVSVGI----EDEADLIADFEQALD 395 (397)
T ss_pred CCCCeeeecCcccccccCCHHHHHhcCCCC----CeEEEEeCC----CCHHHHHHHHHHHHh
Confidence 54432 221111 11223556654 899999997 788999999998886
No 197
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.93 E-value=4.2e-24 Score=216.27 Aligned_cols=342 Identities=13% Similarity=0.123 Sum_probs=223.3
Q ss_pred CCCcEEecCCCCCCCCHHHHHHHHHHHhh-ccCCCC--CCccchhhhHHHHHHHHHHHHHHHhC--------CCCCcEEE
Q 040741 55 AGRPLYLDMQATTPVDPRVLDAMLPFYLS-RYGNPH--SRTHLFGWESEVAVETARSQIADLIG--------ASPKEIIF 123 (457)
Q Consensus 55 ~~~~i~l~~~~~~~~~~~v~~a~~~~~~~-~~~~p~--~~~~~~~~~~~~~~~~~~~~la~~~g--------~~~~~i~~ 123 (457)
..+.|.|+.+.+..+.+.+.+.+...... ...... .......|.......++++.++++++ +++++|++
T Consensus 37 p~g~i~L~~~En~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iii 116 (468)
T PLN02450 37 PSGIIQMGLAENQLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVL 116 (468)
T ss_pred CCeeEEeehhHhHhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEE
Confidence 35678998877776665555554433210 000000 00000011111234456777777663 57888999
Q ss_pred eCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC--CCCCCCHHHHHHhcCC------
Q 040741 124 TSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG--ADGIVNLDELRAAIRP------ 195 (457)
Q Consensus 124 t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~le~~i~~------ 195 (457)
|+|+++++.+++.+++ ++||.|+++.+.|+.+...+.. ..|++++.++.+ .+..+|++++++++.+
T Consensus 117 t~Ga~~al~~l~~~l~----~pGd~Vlv~~P~Y~~~~~~~~~--~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~ 190 (468)
T PLN02450 117 TAGATSANETLMFCLA----EPGDAFLLPTPYYPGFDRDLKW--RTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNL 190 (468)
T ss_pred ccChHHHHHHHHHHhC----CCCCEEEECCCCCCchHHHHhh--cCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCC
Confidence 9999999999999998 8999999999999998776552 239999999875 3456788999988753
Q ss_pred CceEEEEeccccccccccC---hHHHHHHHHhcCCcEEEehhhhc---CCCcc----cC---------CCCcccEEEecc
Q 040741 196 DTGLISVMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQAL---GKIPV----DV---------EKWNVSLMSLSG 256 (457)
Q Consensus 196 ~t~li~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~---g~~~~----~~---------~~~~~Di~~~s~ 256 (457)
++++|++++++||||.+++ +++|.++|++|+++||+|++++. ...++ .. ...+.-+++.|+
T Consensus 191 ~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~ 270 (468)
T PLN02450 191 KVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSL 270 (468)
T ss_pred CeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEec
Confidence 6889999999999999998 66788889999999999999973 21111 11 012334788899
Q ss_pred ccccCCCC--ceEEEEecCCC-ccccccccCCccccccccCCCChhHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHH
Q 040741 257 HKIYGPKG--VGALYMRRRPR-IRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIA---KKEMDYDHKRITALHDRLL 330 (457)
Q Consensus 257 ~K~~g~~G--~G~l~~~~~~~-~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~---~~~~~~~~~~~~~~~~~l~ 330 (457)
+|.||.+| +|++++.++.+ ..+.... ..+..+.....++..+++.. ...+.+.++++++.++.+.
T Consensus 271 SK~~~l~GlRiG~li~~~~~l~~~~~~~~---------~~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~ 341 (468)
T PLN02450 271 SKDLGLPGFRVGAIYSNDEMVVSAATKMS---------SFGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLV 341 (468)
T ss_pred cccCCCCCccEEEEEECCHHHHHHHHHHh---------hcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 99877555 99999875432 2222111 11233444444444444321 1235677788889999999
Q ss_pred HHHhhcCCCeEEeCCCCCcccceEEEEEcc-ccc------hHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCcc
Q 040741 331 NGIKEKLDGVVVNGSMERRYIGNLNLSFAY-VEG------ESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDED 400 (457)
Q Consensus 331 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~ 400 (457)
+.|++ + ++.+..+. . +.++.+.++. .+. .++...+ .||.+.+|..|...
T Consensus 342 ~~L~~-~-gi~~~~~~-~--g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~---------------- 400 (468)
T PLN02450 342 SGLEA-A-GIKCLKSN-A--GLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCT---------------- 400 (468)
T ss_pred HHHHH-c-CCcccCCC-c--eEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCC----------------
Confidence 99988 5 66554321 1 2234444431 111 2333333 59999999765321
Q ss_pred CCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 401 MAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 401 ~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
..+++||+++. .++++++.++++|++++++..
T Consensus 401 -~~g~~Rl~f~~-~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 401 -EPGWFRVCFAN-MSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred -CCCEEEEEecC-CCHHHHHHHHHHHHHHHHhcc
Confidence 12799999996 457999999999999986544
No 198
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.93 E-value=2.3e-24 Score=213.25 Aligned_cols=309 Identities=11% Similarity=0.049 Sum_probs=214.9
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHH-HHHhcCc
Q 040741 93 HLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCR-HLQQEGF 171 (457)
Q Consensus 93 ~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~G~ 171 (457)
+.|++...+.+.++++.++++.|.+ ++++++||++|+.+++.+++ ++||+||++.+.|.++...+. .+...|+
T Consensus 57 ~~Y~r~~~pt~~~Le~~lA~l~g~~--~~l~~~sgt~Ai~~~l~al~----~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi 130 (394)
T PRK07050 57 WRYGLHATPTSLALAQRLAEIEGGR--HALLQPSGLAAISLVYFGLV----KAGDDVLIPDNAYGPNRDHGEWLARDFGI 130 (394)
T ss_pred cccCCCCCHHHHHHHHHHHHHhCCC--eEEEeccHHHHHHHHHHHHh----CCCCEEEEecCCcccHHHHHHHHHHhcCe
Confidence 3455555678899999999999975 59999999999999999997 899999999999998886553 3456699
Q ss_pred EEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccE
Q 040741 172 EITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSL 251 (457)
Q Consensus 172 ~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di 251 (457)
++++++.. +.++++++++++|++|++++++||+|.+.++++|.++|+++|+++++|++++.+.. ......++|+
T Consensus 131 ~v~~vd~~-----~~~~l~~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~-~~~l~~GaDi 204 (394)
T PRK07050 131 TVRFYDPL-----IGAGIADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLA-FKPFEHGVDI 204 (394)
T ss_pred EEEEECCC-----CHHHHHHhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCcccccc-cCHHHcCCeE
Confidence 99988754 56789999999999999999999999999999999999999999999999988754 2333457899
Q ss_pred EEeccccccC-CCC--ceEEEEec-CCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 040741 252 MSLSGHKIYG-PKG--VGALYMRR-RPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHD 327 (457)
Q Consensus 252 ~~~s~~K~~g-~~G--~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~ 327 (457)
++.|++|+++ ..+ .|++++++ +..++++..... ..++.++..... ++.. ...+..++++..+++.
T Consensus 205 ~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~-------~G~~~~~~~a~l---~lr~-l~tl~~Rl~~~~~~a~ 273 (394)
T PRK07050 205 SVQALTKYQSGGSDVLMGATITADAELHAKLKLARMR-------LGIGVSADDCSL---VLRG-LPSLQVRLAAHDRSAL 273 (394)
T ss_pred EEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHh-------cCCCCCHHHHHH---HHcC-CCcHHHHHHHHHHHHH
Confidence 9999999654 332 57777654 333333322211 111333222211 1111 2245667788888888
Q ss_pred HHHHHHhhcCCCeEEeCCC--------------CCcccceEEEEEcc----ccchHHHhccc--CeEecccCccCCCC-C
Q 040741 328 RLLNGIKEKLDGVVVNGSM--------------ERRYIGNLNLSFAY----VEGESLLMGLK--EVAVSSGSACTSAS-L 386 (457)
Q Consensus 328 ~l~~~l~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~----~~~~~~~~~l~--~i~~~~g~~~~~~~-~ 386 (457)
++.+.|++ .|.+..+-.+ ....++++.|.+.. .+...++..|+ +++++-|...+... .
T Consensus 274 ~la~~L~~-~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~ 352 (394)
T PRK07050 274 EVAEWLKA-RPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEALELFAIGWSWGGACSLAMPY 352 (394)
T ss_pred HHHHHHHh-CCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcCCCCeeccccCCccceEeeC
Confidence 99999988 6765432211 11245666666653 12345666663 66677776655331 0
Q ss_pred Chh-HHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 387 EPS-YVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 387 ~~~-~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
.++ ..+...+ ..++.|||+++. ||+|.+++.|+++++..
T Consensus 353 ~~~~~~~~~~~----~~~~~iR~svGl----E~~~dl~~dl~~al~~~ 392 (394)
T PRK07050 353 DVASMRTAKWP----HRGTLVRLYIGL----EDEADLIADLEQALEAA 392 (394)
T ss_pred cccccchhhcC----CCCCEEEEEeCc----CCHHHHHHHHHHHHHHh
Confidence 000 1112222 334899999997 78888888888888753
No 199
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.93 E-value=1.8e-23 Score=201.06 Aligned_cols=335 Identities=14% Similarity=0.069 Sum_probs=240.6
Q ss_pred EecCCCCCCCCHHHHHHHHHHHhhccC---CCCCCccchhhhHHHHHHHHHHHHHHHhCCCCC-c-EEEeCChHHHHHHH
Q 040741 60 YLDMQATTPVDPRVLDAMLPFYLSRYG---NPHSRTHLFGWESEVAVETARSQIADLIGASPK-E-IIFTSGATESNNVS 134 (457)
Q Consensus 60 ~l~~~~~~~~~~~v~~a~~~~~~~~~~---~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~-~-i~~t~g~T~a~~~a 134 (457)
|.-.+|+..+|++|++++.+.+.+..+ .... .+..+..+.+.+.++++.|+++++.+.+ + +++++|||.++.++
T Consensus 6 ~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~e-isHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~ 84 (364)
T PRK12462 6 LNFSGGPGALPDTVLEQVRQAVVELPETGLSVLG-MSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMI 84 (364)
T ss_pred ceecCCCcCCCHHHHHHHHHHHhcccccCccccc-cccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHH
Confidence 556778889999999999988876443 1111 2223567779999999999999999543 3 55566699999999
Q ss_pred HHHhhhhhcCCCCEEE-EcCCCCcchHHHHHHHHhcCcEEEEEeC----CCCCCCCHHHHHHhcCCCceEEEEecccccc
Q 040741 135 IKGVMHFYKDKKRHVI-TTQTEHKCVLDSCRHLQQEGFEITYLPV----GADGIVNLDELRAAIRPDTGLISVMAVNNEI 209 (457)
Q Consensus 135 l~~~~~~~~~~g~~vi-~~~~~h~~~~~~~~~~~~~G~~v~~v~~----~~~~~~d~~~le~~i~~~t~li~i~~~~~~~ 209 (457)
+.+++ .+++.++ +-...+.+.. +.+.++..| ++..+.. +.+..++++++ .++++.+.|.+++..+.+
T Consensus 85 ~~Nll----~~g~~~~~~~~tG~fg~r-~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t~NETst 156 (364)
T PRK12462 85 PMNFS----RPGAAAPEYVTTGYWSRK-AIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYVSNETVE 156 (364)
T ss_pred HHHcC----CCCCcEEEEEeCCHHHHH-HHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEccCCCCc
Confidence 99998 7787543 2223333332 244555556 5555542 22345666665 345677899999999999
Q ss_pred ccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCCceEEEEecCCCcccccccc---CCc
Q 040741 210 GVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLIN---GGG 286 (457)
Q Consensus 210 G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~---~~~ 286 (457)
|+..| ++.+.+++++++|.+.++++.+++++++ |+++.+.+|.+||+|+++++++++++++..+... .+.
T Consensus 157 Gv~~~-----~~~~~~~~llvvD~sS~~~s~pid~~~~--dvi~agsQKnlgP~Gltvvivs~~al~~~~~~~p~~ldy~ 229 (364)
T PRK12462 157 GLQFP-----DAAGLPDSPLIADMSSDFMSRPFDVEAY--GMVYAHAQKNLGPAGVTVAIIRRALLERVPDTLPPMLDFR 229 (364)
T ss_pred eEecC-----cccccCCCeEEEEcCchhhCCCCChHHc--cEEEeeccccCCCCceEEEEECHHHHhhccccCCchhhHH
Confidence 99997 3334469999999999999999999986 9999999998889999999999998876554322 110
Q ss_pred --cccccccCCCChhHHHHHHHHHHHHH-H--hhHHHHHHHHHHHHHHHHHHhhcCCCeEEe-CCCCCcccceEEEEEcc
Q 040741 287 --QERGIRSGTLPTPLIVGFGSACEIAK-K--EMDYDHKRITALHDRLLNGIKEKLDGVVVN-GSMERRYIGNLNLSFAY 360 (457)
Q Consensus 287 --~~~~~~~~t~~~~~~~al~~al~~~~-~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 360 (457)
...+..+.||++..++++..+++++. + +++.+.++.+++++.+++.+.+ .+++-.. .+++.+...++.|.+..
T Consensus 230 ~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~-~~~~~~~~~~~~~RS~mnv~f~~~~ 308 (364)
T PRK12462 230 THVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDA-LNEVIDCHAHRAARSTMNVAFRFRQ 308 (364)
T ss_pred HHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHh-CCCcccCCCChhhcCcceEEEEcCC
Confidence 11233456999999999999999985 4 6999999999999999999999 7755443 44455555555555443
Q ss_pred cc-chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 361 VE-GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 361 ~~-~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
.+ ..+++... +|+.-..|. ..-+.+|+++-..++.|+++.|++.|+++-++
T Consensus 309 ~~l~~~f~~~a~~~gl~~lkGh---------------------r~vgg~Ras~yna~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 309 PRLDTLFKEQSTEAGFCGLSGH---------------------RSIGGIRASLYNAVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred HHHHHHHHHHHHHCCCccccCC---------------------cccCceEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 21 12333333 354433332 11267999999999999999999999998765
No 200
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.93 E-value=9.6e-24 Score=209.91 Aligned_cols=292 Identities=21% Similarity=0.260 Sum_probs=225.5
Q ss_pred CCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCChHHHHHHH
Q 040741 56 GRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGAS-PKEIIFTSGATESNNVS 134 (457)
Q Consensus 56 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~i~~t~g~T~a~~~a 134 (457)
+...++-..+++.+++.+.+++..++....+++... ......-+++..+++++++++ .....||+|||+|+.++
T Consensus 61 ~p~~~~~~~~~~~~~~~a~~~~~~~~~~nl~d~~~~-----p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~la 135 (460)
T COG0076 61 HPRANLAGFCPTRVPPVAAELLVSALNKNLGDPDES-----PAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLA 135 (460)
T ss_pred CcceEEEccCCCCCHHHHHHHHHHHHhhcCCCcccC-----hhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHH
Confidence 344556666777889999999999998776665542 244467777899999999995 34599999999999999
Q ss_pred HHHhhhhhcC-C---------CCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC-CCCCCHHHHHHhcCCCceE--EE
Q 040741 135 IKGVMHFYKD-K---------KRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA-DGIVNLDELRAAIRPDTGL--IS 201 (457)
Q Consensus 135 l~~~~~~~~~-~---------g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~-~~~~d~~~le~~i~~~t~l--i~ 201 (457)
+.+....+.+ . ...|+++...|+|+.++++++ |+.+..++... +..+|+++++++|++++.. |+
T Consensus 136 l~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~l---G~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV 212 (460)
T COG0076 136 LLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARYL---GLGLRRVPTVPTDYRIDVDALEEAIDENTIGGVVV 212 (460)
T ss_pred HHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHHh---CCCceeEEeccCccccCHHHHHHHHHhhccCceEE
Confidence 9988865531 1 237999999999999999999 99999888886 7899999999999999887 88
Q ss_pred EeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcc-------cCCCCcccEEEecccc-ccCCCCceEEEEecC
Q 040741 202 VMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPV-------DVEKWNVSLMSLSGHK-IYGPKGVGALYMRRR 273 (457)
Q Consensus 202 i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~-------~~~~~~~Di~~~s~~K-~~g~~G~G~l~~~~~ 273 (457)
.....+++|.+.|+++|.++|++|++++|+|+|.+....++ ++.-.++|.+++++|| .+.|.|+|+++++++
T Consensus 213 ~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~ 292 (460)
T COG0076 213 GTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDE 292 (460)
T ss_pred EEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEEEECH
Confidence 88899999999999999999999999999999998765543 2222368999999999 577999999999997
Q ss_pred -CCccc---cccccCC-ccccccccCCCChhHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCC
Q 040741 274 -PRIRV---EPLINGG-GQERGIRSGTLPTPLIVGFGSACEIA-KKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSME 347 (457)
Q Consensus 274 -~~~~~---~~~~~~~-~~~~~~~~~t~~~~~~~al~~al~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 347 (457)
...+. .....++ ........++.+....+++...+..+ .+++.++.++..++++++.+.|++ .+.+.+..++
T Consensus 293 e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~-~~~~e~~~~p- 370 (460)
T COG0076 293 EALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEK-LGDFELVNEP- 370 (460)
T ss_pred HHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHh-CCCcEeecCC-
Confidence 33322 1222222 11111122344444555555555555 578999999999999999999999 7789998865
Q ss_pred CcccceEEEEEc
Q 040741 348 RRYIGNLNLSFA 359 (457)
Q Consensus 348 ~~~~~~~~~~~~ 359 (457)
..+.+.|..+
T Consensus 371 --~l~~V~fr~~ 380 (460)
T COG0076 371 --ELPIVAFRLK 380 (460)
T ss_pred --ccceEEEEcC
Confidence 3566666663
No 201
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.93 E-value=1.5e-23 Score=206.35 Aligned_cols=332 Identities=17% Similarity=0.144 Sum_probs=219.6
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCC
Q 040741 68 PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKR 147 (457)
Q Consensus 68 ~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~ 147 (457)
.++++.++++.+.+.+.+ ..+. .+...++++++++++|.+ ++++|+|||+|+.+++.++.. ++||
T Consensus 8 ~~~~~e~~a~~~~~~~~~--------~~~~--g~~~~~~e~~la~~~g~~--~~v~~~sgt~aL~~~l~al~~---~pGd 72 (376)
T TIGR02379 8 PVTGQELEYIAEAISEGK--------LSGD--GPFSRRCETWLENRTGTK--KALLTPSCTAALEMAALLLDI---QPGD 72 (376)
T ss_pred CCCHHHHHHHHHHHHcCC--------ccCC--cHHHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHcCC---CCcC
Confidence 467778899998886522 1111 257889999999999875 499999999999999888722 8999
Q ss_pred EEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCC-CCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcC
Q 040741 148 HVITTQTEHKCVLDSCRHLQQEGFEITYLPVGAD-GIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFK 226 (457)
Q Consensus 148 ~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~-~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~ 226 (457)
+||++.++|.+...++... |+++++++++.+ +.+|++++++++++++++|++. +++|...++++|.++|++||
T Consensus 73 ~Viv~~~t~~~~~~~~~~~---G~~~v~vd~d~~~~~~d~~~le~~i~~~tk~Iip~---~~~G~~~d~~~I~~la~~~~ 146 (376)
T TIGR02379 73 EVIMPSYTFVSTANAFVLR---GAKIVFVDIRPDTMNIDETLIESAITHRTKAIVPV---HYAGVACDMDTIMALANKHQ 146 (376)
T ss_pred EEEECCCCcHHHHHHHHHc---CCEEEEEecCCCcCCCCHHHHHHhcCcCceEEEEe---CCCCCccCHHHHHHHHHHCC
Confidence 9999999999998877655 999999999865 5799999999999999998744 46899999999999999999
Q ss_pred CcEEEehhhhcCCCcccCCCCc--ccEEEeccc--ccc--CCCCceEEEEe-cCCCccccccccCCcccc-cc-------
Q 040741 227 IPFHTDAAQALGKIPVDVEKWN--VSLMSLSGH--KIY--GPKGVGALYMR-RRPRIRVEPLINGGGQER-GI------- 291 (457)
Q Consensus 227 v~li~D~a~~~g~~~~~~~~~~--~Di~~~s~~--K~~--g~~G~G~l~~~-~~~~~~~~~~~~~~~~~~-~~------- 291 (457)
++||+|++|+.|.. .+....+ .|+.++|+| |.+ |+.| |+++.+ ++..++++.....+.... ..
T Consensus 147 i~vIeDaa~~~g~~-~~~~~~g~~~~~~~fSf~~~K~l~~g~~g-G~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 224 (376)
T TIGR02379 147 LFVIEDAAQGVMST-YKGRALGSIGHLGTFSFHETKNYTSGGEG-GALLINDQAFIERAEIIREKGTNRSQFFRGEVDKY 224 (376)
T ss_pred CEEEEECccccCCc-cCCcccCCCCCEEEEeCCCCCcCcccCCc-eEEEECCHHHHHHHHHHHHhCCCCccccccCCCcc
Confidence 99999999998864 2222222 266777765 433 3455 777766 455566665544321100 00
Q ss_pred ---ccCC-CChhHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHhhcCC--C-eEEeCCCCCcccc--eEEEEEcc-
Q 040741 292 ---RSGT-LPTPLIVGFGSACEIA-KKEMDYDHKRITALHDRLLNGIKEKLD--G-VVVNGSMERRYIG--NLNLSFAY- 360 (457)
Q Consensus 292 ---~~~t-~~~~~~~al~~al~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~--~-~~~~~~~~~~~~~--~~~~~~~~- 360 (457)
..|. .....+. +|+-.. .+.+++..++.+++++++.+.|.+ ++ + ..+...++..... ...+.++.
T Consensus 225 ~~~~~g~n~~~~~~~---Aa~g~~qL~~l~~~~~~r~~~~~~y~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 300 (376)
T TIGR02379 225 TWRDIGSSYLPSELQ---AAYLWAQLEQADRINQDRLATWQLYQDALKP-LEEKGIIELPSIPNGCQHNAHMFYIKLKDE 300 (376)
T ss_pred eeeeecccCCccHHH---HHHHHHHHHHhHHHHHHHHHHHHHHHHHhcc-CCcCCeeeCCCCCCCCeeeeEEEEEEECCc
Confidence 0011 0111111 222211 234677777888888888888877 54 2 3333222222122 22233322
Q ss_pred ccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCC-------CccCCCCeEEEecCCCCCHHHHHHHHHHHHHHH
Q 040741 361 VEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGV-------DEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 361 ~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~-------~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~ 430 (457)
.+.+++...| +||....+. .+....|-+ +.++. .+....+.|.+.+....+++|++++++.|++++
T Consensus 301 ~~r~~l~~~L~~~gI~~~~~~--~p~~~~~~~--~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 301 DDRNELIKYLKEQEIMAVFHY--VPLHSSPAG--RYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred CCHHHHHHHHHHCCCCccccC--cCCCcchhH--HhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 2457777777 576655432 233333322 11211 112235789999999999999999999999864
No 202
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.93 E-value=1.1e-24 Score=214.53 Aligned_cols=307 Identities=15% Similarity=0.134 Sum_probs=211.4
Q ss_pred chhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHH-HHHhcCcE
Q 040741 94 LFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCR-HLQQEGFE 172 (457)
Q Consensus 94 ~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~G~~ 172 (457)
.|++...+....+++.++++.|.+. .+++++|+.|+.+++ .+. ++|++|+++++.|++....+. .+...|++
T Consensus 43 ~y~r~~~p~~~~Le~~la~l~g~~~--al~~~SG~~Al~~~l-~~l----~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~ 115 (380)
T PRK06176 43 EYSRSGNPTRFALEELIADLEGGVK--GFAFASGLAGIHAVF-SLF----QSGDHVLLGDDVYGGTFRLFDKVLVKNGLS 115 (380)
T ss_pred cccCCCChhHHHHHHHHHHHhCCCC--EEEECCHHHHHHHHH-HHc----CCCCEEEEcCCChhHHHHHHHHHHHhcCeE
Confidence 3444555788999999999999765 678888999998655 455 799999999999887765544 34566999
Q ss_pred EEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEE
Q 040741 173 ITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLM 252 (457)
Q Consensus 173 v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~ 252 (457)
+++++.. |++++++++++++++|++++++||+|.+.|+++|.++|+++|+++++|++++.+...... .+++|++
T Consensus 116 v~~vd~~-----d~e~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~p~-~~gaDiv 189 (380)
T PRK06176 116 CTIIDTS-----DLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQNPL-LLGADIV 189 (380)
T ss_pred EEEcCCC-----CHHHHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccCCcc-ccCCCEE
Confidence 9888754 899999999999999999999999999999999999999999999999999865433222 4689999
Q ss_pred EeccccccC-CCC--ceEEEEecC-CCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 040741 253 SLSGHKIYG-PKG--VGALYMRRR-PRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDR 328 (457)
Q Consensus 253 ~~s~~K~~g-~~G--~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~ 328 (457)
++|++|+++ +.. .|+++.+++ ..+++.......+ ...++.....+.. ....+..++++..+++.+
T Consensus 190 v~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G-------~~~~~~~~~l~~~----gl~tl~~R~~~~~~~a~~ 258 (380)
T PRK06176 190 VHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIG-------GVLGPQDSWLLQR----GIKTLGLRMEAHQKNALC 258 (380)
T ss_pred EecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhc-------CCCCHHHHHHHHh----ccCcHHHHHHHHHHHHHH
Confidence 999999665 432 577776543 2233322221111 1222222211111 112356777788888889
Q ss_pred HHHHHhhcCCCeEEeCCC--------------CCcccceEEEEEccc-cchHHHhccc--CeEecccCcc----CCCCCC
Q 040741 329 LLNGIKEKLDGVVVNGSM--------------ERRYIGNLNLSFAYV-EGESLLMGLK--EVAVSSGSAC----TSASLE 387 (457)
Q Consensus 329 l~~~l~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~-~~~~~~~~l~--~i~~~~g~~~----~~~~~~ 387 (457)
+.+.|++ .|.+.-+-.+ ...+++++.|.+... ....++..|+ .++++-|... .+....
T Consensus 259 la~~L~~-~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~ 337 (380)
T PRK06176 259 VAEFLEK-HPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKNDSEAVAFVESLKLFILGESLGGVESLVGIPAFMT 337 (380)
T ss_pred HHHHHHh-CCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHcCCcceEccCCCCCCceeeCCcccc
Confidence 9999988 7776432111 113467778887532 1234555553 4555556542 222221
Q ss_pred h----hHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 388 P----SYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 388 ~----~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
+ .-.....|+.+ +.||++++. ||+|.+++.|+++++++
T Consensus 338 ~~~~~~~~~~~~gi~~----~liR~svGl----E~~~dli~dl~~Al~~~ 379 (380)
T PRK06176 338 HACIPKEQREAAGIRD----GLVRLSVGI----EHEQDLLEDLEQAFAKI 379 (380)
T ss_pred cccCCHHHHHhcCCCc----CeEEEEecc----CCHHHHHHHHHHHHhhc
Confidence 1 11234567665 899999996 78999999999988754
No 203
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.93 E-value=3.6e-24 Score=197.85 Aligned_cols=325 Identities=15% Similarity=0.154 Sum_probs=243.7
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCC
Q 040741 68 PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKR 147 (457)
Q Consensus 68 ~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~ 147 (457)
.-.|+|++||.+.+..+.+..+...... +......++|+.||++-+.+. .++|++ .--|+...+..+.+. -||+
T Consensus 185 s~Hp~V~~A~~~tl~~hG~GAGGTRNIs--G~s~~hv~LE~eLA~LHqK~a-ALlFsS-CfVANDstLftLak~--lpgc 258 (570)
T KOG1360|consen 185 SRHPEVLDAMHDTLDRHGAGAGGTRNIS--GHSKHHVRLEAELADLHQKEA-ALLFSS-CFVANDSTLFTLAKK--LPGC 258 (570)
T ss_pred cCChHHHHHHHHHHHHcCCCcCCccccC--CCCchhhhHHHHHHHHhcCcc-eeeeee-eeeccchHHHHHHHH--CCCc
Confidence 3468899999999987643322222222 233678899999999999765 255554 666788888877753 5899
Q ss_pred EEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC----CceEEEEeccccccccccChHHHHHHHH
Q 040741 148 HVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP----DTGLISVMAVNNEIGVIQPMEEIGQICK 223 (457)
Q Consensus 148 ~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~----~t~li~i~~~~~~~G~~~~l~~i~~l~~ 223 (457)
+|+.+..+|.+.+..++.. +..-..+..+ |++.|++++.. -+++|.++.++++.|.+.|+++|+++++
T Consensus 259 ei~SD~gNHASMI~GIrns---~v~K~IFrHN-----D~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah 330 (570)
T KOG1360|consen 259 EIFSDEGNHASMIQGIRNS---RVPKHIFRHN-----DLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAH 330 (570)
T ss_pred EEeccccchHHHHHHhhhc---CCcceeeccC-----CHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHHH
Confidence 9999999999999999887 7666666666 88999888853 4789999999999999999999999999
Q ss_pred hcCCcEEEehhhhcCCCcc---cCC-----CCcccEEEeccccccCCCCceEEEEecCCCccccccccCCccccccccCC
Q 040741 224 EFKIPFHTDAAQALGKIPV---DVE-----KWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGT 295 (457)
Q Consensus 224 ~~~v~li~D~a~~~g~~~~---~~~-----~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t 295 (457)
+||.+.++|++|++|-... .+. -..+||+++++.|.||.-| |++...+.+++-++.+..|. +...+
T Consensus 331 ~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG-GYIAat~~LvDmiRSyAaGF-----IFTTS 404 (570)
T KOG1360|consen 331 KYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG-GYIAATRKLVDMIRSYAAGF-----IFTTS 404 (570)
T ss_pred HhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccccc-ceehhhhhHHHHHHHhcCce-----EEecC
Confidence 9999999999998764421 111 1257999999999999997 99999999888888777664 33446
Q ss_pred CChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcccc-chHHHhcc---
Q 040741 296 LPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVE-GESLLMGL--- 370 (457)
Q Consensus 296 ~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l--- 370 (457)
.|+..+.++..++++... +-...+...+++.+++++.|.+ .|+.+...+.. ++-+.+.+.. ..++.+.|
T Consensus 405 LPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~--~GiPVi~~pSH----IiPv~vgda~l~~~~sd~Li~~ 478 (570)
T KOG1360|consen 405 LPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLME--LGIPVIPNPSH----IIPVRVGDAALAKQASDILISK 478 (570)
T ss_pred CChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH--cCCcccCCCcc----eeeeeccCHHHHHHHHHHHHHh
Confidence 777788888888888765 3566777788899999999998 58877765533 2223332211 11222222
Q ss_pred cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 371 KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 371 ~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
.+|++..-.+.+. ..+...+||.++..+|.+.++.+++.|.++++++.
T Consensus 479 h~iYvQaINyPTV----------------~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v~ 526 (570)
T KOG1360|consen 479 HNIYVQAINYPTV----------------ARGTERLRIAPTPHHTPQMMNILVNALLDVWNEVG 526 (570)
T ss_pred cCeEEEeccCCcc----------------cccceeeecCCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 6787765433322 23457999999999999999999999999998764
No 204
>PRK10534 L-threonine aldolase; Provisional
Probab=99.93 E-value=6e-24 Score=207.21 Aligned_cols=310 Identities=17% Similarity=0.201 Sum_probs=205.7
Q ss_pred EEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHh
Q 040741 59 LYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGV 138 (457)
Q Consensus 59 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~ 138 (457)
|.|..+.++.++|.+.+++.+..... .. |...+...++++.+++++|.++ +++++||++++.+++.++
T Consensus 2 ~~~~~~~~~~p~~~~~~a~~~~~~~~--------~~--Y~~~~~~~~L~~~la~~~g~~~--~~v~~~g~~a~~~~l~~~ 69 (333)
T PRK10534 2 IDLRSDTVTRPSRAMLEAMMAAPVGD--------DV--YGDDPTVNALQDYAAELSGKEA--ALFLPTGTQANLVALLSH 69 (333)
T ss_pred cccccccCCCCCHHHHHHHHhccCCC--------cc--cCCCHHHHHHHHHHHHHhCCCe--EEEeCchHHHHHHHHHHh
Confidence 45566666678899999987654322 11 1123678899999999999876 678889999998888887
Q ss_pred hhhhcCCCCEEEEcCCCCcchHHH--HHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC------CceEEEEeccccccc
Q 040741 139 MHFYKDKKRHVITTQTEHKCVLDS--CRHLQQEGFEITYLPVGADGIVNLDELRAAIRP------DTGLISVMAVNNEIG 210 (457)
Q Consensus 139 ~~~~~~~g~~vi~~~~~h~~~~~~--~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~------~t~li~i~~~~~~~G 210 (457)
. ++|++|+++.+.|.....+ +... .+.+++.++.+.++.+|++++++++++ ++++|++++++ +|
T Consensus 70 ~----~~gd~vi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G 141 (333)
T PRK10534 70 C----ERGEEYIVGQAAHNYLYEAGGAAVL--GSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NG 141 (333)
T ss_pred c----CCCCeeEEechhhhhHhcCCchHHh--cCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CC
Confidence 7 8999999988777544332 2222 246778888777788999999999976 58899998655 59
Q ss_pred cccChH---HHHHHHHhcCCcEEEehhhhcCCC---cccCC--CCcccEEEeccccccCCCCce-EEEEecCCCcccccc
Q 040741 211 VIQPME---EIGQICKEFKIPFHTDAAQALGKI---PVDVE--KWNVSLMSLSGHKIYGPKGVG-ALYMRRRPRIRVEPL 281 (457)
Q Consensus 211 ~~~~l~---~i~~l~~~~~v~li~D~a~~~g~~---~~~~~--~~~~Di~~~s~~K~~g~~G~G-~l~~~~~~~~~~~~~ 281 (457)
.+.|.+ +|.++|++|++++++|+|+.++.. ..... ....|.++.|+||.||.. +| +++.+++.++++...
T Consensus 142 ~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~-~G~~~~~~~~~i~~~~~~ 220 (333)
T PRK10534 142 KVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTP-VGSLLVGNRDYIKRARRW 220 (333)
T ss_pred eecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCc-ccceEEcCHHHHHHHHHH
Confidence 999865 456789999999999999875421 11110 012466677899988865 56 677777666655443
Q ss_pred ccCCccccccccCCCCh--hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEc
Q 040741 282 INGGGQERGIRSGTLPT--PLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFA 359 (457)
Q Consensus 282 ~~~~~~~~~~~~~t~~~--~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (457)
...++ +..+. ....+...+++ ...+..++..+.++++.+.|.+ + ++.+..+ ..+++.+.++
T Consensus 221 ~~~~~-------~~~~~~~~~~a~~~~~l~----~~~~~~~~~~~~r~~l~~~L~~-~-g~~~~~~----~~nfv~~~~~ 283 (333)
T PRK10534 221 RKMTG-------GGMRQAGILAAAGLYALK----HNVARLQEDHDNAAWLAEQLRE-A-GADVMRQ----DTNMLFVRVG 283 (333)
T ss_pred HHHhC-------CchhhHHHHHHHHHHHHH----hhHHHHHHHHHHHHHHHHHHHh-C-CCccCCC----CceEEEEECC
Confidence 32110 01111 11222222222 1123333455567889999998 4 7766542 1445555554
Q ss_pred cccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 360 YVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 360 ~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
..+...+...| +||.+.++ ..+|++....+|+|++++++++|++++.
T Consensus 284 ~~~~~~~~~~l~~~gi~v~~~-------------------------~~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 284 EEQAAALGEYMRERNVLINAS-------------------------PIVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred chhHHHHHHHHHHcCeeecCC-------------------------ceEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 32334555555 68887654 3578887666789999999999987654
No 205
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.93 E-value=1.3e-23 Score=208.28 Aligned_cols=337 Identities=16% Similarity=0.129 Sum_probs=223.9
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCC
Q 040741 68 PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKR 147 (457)
Q Consensus 68 ~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~ 147 (457)
.++++.++++.+.+.+.+ . .+ .+...++|+.+++++|.+. .++++|||+|+.+++.++.. ++||
T Consensus 7 ~~~~~~~~~v~~~~~~~~-------~--~~--g~~~~~le~~la~~~g~~~--~v~~~sgt~al~~~l~al~~---~~Gd 70 (380)
T TIGR03588 7 SIDQDDIDAVVEVLKSDF-------L--TQ--GPTVPAFEEALAEYVGAKY--AVAFNSATSALHIACLALGV---GPGD 70 (380)
T ss_pred CCCHHHHHHHHHHHhcCC-------c--cC--ChhHHHHHHHHHHHHCCCe--EEEEcCHHHHHHHHHHHcCC---CCCC
Confidence 456777888888776421 1 11 1457889999999999853 67777899999999998832 7899
Q ss_pred EEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC-CCCCCCHHHHHHhcC----CCceEEEEeccccccccccChHHHHHHH
Q 040741 148 HVITTQTEHKCVLDSCRHLQQEGFEITYLPVG-ADGIVNLDELRAAIR----PDTGLISVMAVNNEIGVIQPMEEIGQIC 222 (457)
Q Consensus 148 ~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~-~~~~~d~~~le~~i~----~~t~li~i~~~~~~~G~~~~l~~i~~l~ 222 (457)
+|+++.++|.+...++... |+++++++++ .++.+|+++++++++ +++++|++.+ ++|...++++|.++|
T Consensus 71 ~Viv~~~~~~~~~~~~~~~---G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~~~~~~i~~l~ 144 (380)
T TIGR03588 71 RVWTTPITFVATANCALYC---GAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVD---FAGKSVDMQAIAALA 144 (380)
T ss_pred EEEeCCcchHHHHHHHHHc---CCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEeC---CCCccCCHHHHHHHH
Confidence 9999999999988776655 9999999996 467799999999998 7888888655 489999999999999
Q ss_pred HhcCCcEEEehhhhcCCCcccCCCCcc----cEEEeccc--cccCCCCceEEEEecC-CCccccccccCCccc-c-----
Q 040741 223 KEFKIPFHTDAAQALGKIPVDVEKWNV----SLMSLSGH--KIYGPKGVGALYMRRR-PRIRVEPLINGGGQE-R----- 289 (457)
Q Consensus 223 ~~~~v~li~D~a~~~g~~~~~~~~~~~----Di~~~s~~--K~~g~~G~G~l~~~~~-~~~~~~~~~~~~~~~-~----- 289 (457)
++||+++|+|++|++|.. ++....+. |+.++|+| |+++.+..|+++.+++ ..++++....++... .
T Consensus 145 ~~~~~~lI~D~a~a~g~~-~~~~~~g~~~~~d~~~~S~~~~K~~~~~~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 223 (380)
T TIGR03588 145 KKHGLKIIEDASHALGAE-YGGKPVGNCRYADATVFSFHPVKIITTAEGGAVTTNDEELAERMRLLRSHGITKDPLLFEK 223 (380)
T ss_pred HHcCCEEEEECCCcccCc-cCCEeCCCccccceEEEecCCCCcccccCceEEEECCHHHHHHHHHHHHCCCCCCcccccc
Confidence 999999999999999875 44444445 99999987 7665433476666543 334444332221100 0
Q ss_pred ------ccccCCCChh-HHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCC--cccceEEEEEc
Q 040741 290 ------GIRSGTLPTP-LIVGFGSACEIA-KKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMER--RYIGNLNLSFA 359 (457)
Q Consensus 290 ------~~~~~t~~~~-~~~al~~al~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~ 359 (457)
.+..+..... .+..+.+++... .+.++++.++.+++++++.+.|.+ ++++.+...+.. .......+.+.
T Consensus 224 ~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l~~~~~~r~~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~~i~~~ 302 (380)
T TIGR03588 224 QDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKLDRFVAKRREIAARYDRLLKD-LPYFTPLTIPLGSKSAWHLYPILLD 302 (380)
T ss_pred cccCcceeeeeccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCccCCCCCCCCEeEEEEEEEEEC
Confidence 0000111000 011112222211 234788889999999999999999 887765543211 11222233343
Q ss_pred c---ccchHHHhcc--cCeEecccCccCCCCCChhHHH--H--HcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHH
Q 040741 360 Y---VEGESLLMGL--KEVAVSSGSACTSASLEPSYVL--R--ALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 360 ~---~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l--~--~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~ 430 (457)
. .+.+++...| +||.++... .+....|-+.- . .+...+....+.|++.+....+++|++++++.|++++
T Consensus 303 ~~~~~~r~~l~~~L~~~gI~~~~~~--~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 303 QEFGCTRKEVFEALRAAGIGVQVHY--IPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred CcCCCCHHHHHHHHHHCCCCcccCC--cccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence 1 3567777777 577766443 22222221110 0 0111122345899999999999999999999998763
No 206
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.9e-23 Score=203.58 Aligned_cols=309 Identities=16% Similarity=0.147 Sum_probs=211.6
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHH
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVS 134 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~a 134 (457)
...++|+.+.+. +.++.+++++.+.+.... . ..|. .....++++.+++++|++++++++|+|+++++.++
T Consensus 18 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~Y~---~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~ 88 (337)
T PRK03967 18 NYRIWLDKNENPFDLPEELKEEIFEELKRVP---F---NRYP---HITSDPLREAIAEFYGLDAENIAVGNGSDELISYL 88 (337)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHhhcCc---c---ccCC---CCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHH
Confidence 356899988877 678999999988764310 0 0111 12457899999999999999999999999999876
Q ss_pred HHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccC
Q 040741 135 IKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQP 214 (457)
Q Consensus 135 l~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~ 214 (457)
+..+ +|++|++..+.|+.+...++.. |.+++.++.+.++.+|++++++++ ++++++++++++||||.+.+
T Consensus 89 ~~~~------~gd~V~v~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~ 158 (337)
T PRK03967 89 VKLF------EGKHIVITPPTFGMYSFYAKLN---GIPVIDVPLKEDFTIDGERIAEKA-KNASAVFICSPNNPTGNLQP 158 (337)
T ss_pred HHHh------CCCeEEEeCCChHHHHHHHHHc---CCeEEEeecCCCCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCC
Confidence 6543 5899999999998766555544 999999998877789999999875 57788889999999999999
Q ss_pred hHHHHHHHHhcCCcEEEehhhhcCCC-c-cc-CCCCcccEEEeccccccCCCC--ceEEEEecCCCccccccccCCcccc
Q 040741 215 MEEIGQICKEFKIPFHTDAAQALGKI-P-VD-VEKWNVSLMSLSGHKIYGPKG--VGALYMRRRPRIRVEPLINGGGQER 289 (457)
Q Consensus 215 l~~i~~l~~~~~v~li~D~a~~~g~~-~-~~-~~~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~ 289 (457)
.++|.++++ +++++++|+++.-... . .. ......-+++.|++|.||.+| +|+++++++.++++......
T Consensus 159 ~~~l~~i~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~~~~~~~----- 232 (337)
T PRK03967 159 EEEILKVLE-TGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALYRIKPP----- 232 (337)
T ss_pred HHHHHHHHh-cCCEEEEECchhhhcccchHHHHhhCCCEEEEecchHhhcchhhhheeeecCHHHHHHHHhhcCC-----
Confidence 999999995 7999999999973211 1 01 111123477889999888555 99999987766655443321
Q ss_pred ccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHHhc
Q 040741 290 GIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMG 369 (457)
Q Consensus 290 ~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (457)
...+.....++..+++.. +.+.+..++..+.++.+.+.|.+ . .. +.. ..++.+.++ +...
T Consensus 233 ----~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~-~----~~--~~~--~~~~~~~~~------~~~~ 292 (337)
T PRK03967 233 ----FSLNILTMKIVRLALDHY-DLIEERIDYIIKERERVRRELGE-Y----AY--PSD--ANFLLLKLD------AYDY 292 (337)
T ss_pred ----CCCCHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHHHHhcc-C----cC--CCC--CcEEEEhHH------HHHH
Confidence 133444444444444321 23344445556666677777766 2 11 111 233322221 3333
Q ss_pred c--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 370 L--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 370 l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
| +||.++.+.. ...+++||+++ +.++.++++++|+++.+.
T Consensus 293 l~~~gi~v~~~~~--------------------~~~~~~Ri~~~---~~~~~~~l~~~l~~~~~~ 334 (337)
T PRK03967 293 LLENGIVVRKLSG--------------------RLEGHIRVTVG---KREENDEFIKALKEIKEG 334 (337)
T ss_pred HHHCCEEEEeCCC--------------------CCCCeEEEecC---CHHHHHHHHHHHHHHHHh
Confidence 3 6888875321 11279999988 478888888888876654
No 207
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.93 E-value=7.9e-24 Score=208.12 Aligned_cols=305 Identities=16% Similarity=0.141 Sum_probs=208.6
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHH-HHHhcCc
Q 040741 93 HLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCR-HLQQEGF 171 (457)
Q Consensus 93 ~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~G~ 171 (457)
+.|++..++...++++.++++.|++. .++++||++|+.+++ .+. ++|++|++..+.|++...... .+...|+
T Consensus 44 ~~y~r~~~pt~~~le~~la~l~g~~~--~~~~~sG~~ai~~~~-~ll----~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~ 116 (366)
T PRK08247 44 FDYSRTGNPTRGVLEQAIADLEGGDQ--GFACSSGMAAIQLVM-SLF----RSGDELIVSSDLYGGTYRLFEEHWKKWNV 116 (366)
T ss_pred ccccCCCCchHHHHHHHHHHHhCCCc--EEEEcCHHHHHHHHH-HHh----CCCCEEEEecCCcCcHHHHHHHHhhccCc
Confidence 34455555788999999999999976 688888999998765 565 789999999999988765444 3455699
Q ss_pred EEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccE
Q 040741 172 EITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSL 251 (457)
Q Consensus 172 ~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di 251 (457)
++++++.. |++++++++++++++|++++++||+|.+.++++|.++|+++|+++++|++++.+...... ..+.|+
T Consensus 117 ~v~~vd~~-----d~~~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~p~-~~g~di 190 (366)
T PRK08247 117 RFVYVNTA-----SLKAIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRPL-EEGADI 190 (366)
T ss_pred eEEEECCC-----CHHHHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCch-hcCCcE
Confidence 99998764 899999999999999999999999999999999999999999999999999655332222 347899
Q ss_pred EEeccccccCC-CC--ceEEEEe-cCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 040741 252 MSLSGHKIYGP-KG--VGALYMR-RRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHD 327 (457)
Q Consensus 252 ~~~s~~K~~g~-~G--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~ 327 (457)
++.|++|++++ .+ .|+++.+ ++...++....... ....++.....+..++ +.+..++++.+++++
T Consensus 191 ~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~-------g~~~s~~~a~l~~~~l----~tl~~r~~~~~~~a~ 259 (366)
T PRK08247 191 VIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAA-------GAVLSPFDSWLLIRGM----KTLALRMRQHEENAK 259 (366)
T ss_pred EEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhc-------CCCCChHHHHHHHhcc----CcHHHHHHHHHHHHH
Confidence 99999996654 22 5777775 33333333222211 1123332222222222 245667777899999
Q ss_pred HHHHHHhhcCCCeEEeCCCCCcccceEEEEEcccc-chHHHhccc--CeEecccCcc----CCCCCC----hhHHHHHcC
Q 040741 328 RLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVE-GESLLMGLK--EVAVSSGSAC----TSASLE----PSYVLRALG 396 (457)
Q Consensus 328 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~--~i~~~~g~~~----~~~~~~----~~~~l~~~g 396 (457)
.+.+.|++ .|++..+..+. .++++.|.+...+ ...++..++ .++.+-|... .|.... +.......|
T Consensus 260 ~l~~~L~~-~p~v~~v~~P~--~gg~~sf~~~~~~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~g 336 (366)
T PRK08247 260 AIAAFLNE-QPGVTDVLYPG--RGGMLSFRLQDEEWVNPFLKSLKLITFAESLGGVESFITYPATQTHADIPEEIRIANG 336 (366)
T ss_pred HHHHHHHh-CCCeeEEecCC--cCcEEEEEECCHHHHHHHHHcCCcceEccCCCCCceEEECCcccccccCCHHHHHhcC
Confidence 99999999 78876432221 2556666654211 123444442 3333333221 122111 122333456
Q ss_pred CCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 397 VDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 397 ~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
+.+ +.+||+++. |+++.+++.|++++++
T Consensus 337 i~~----~~~R~svGl----E~~~dl~~dl~~al~~ 364 (366)
T PRK08247 337 VCN----RLLRFSVGI----ENVEDLIADLKQAFKQ 364 (366)
T ss_pred CCC----CeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 654 899999996 7888899999998875
No 208
>PRK05839 hypothetical protein; Provisional
Probab=99.93 E-value=5.6e-23 Score=203.22 Aligned_cols=324 Identities=14% Similarity=0.058 Sum_probs=208.1
Q ss_pred CcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhC--CCCCcEEEeCChHHHHHH
Q 040741 57 RPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIG--ASPKEIIFTSGATESNNV 133 (457)
Q Consensus 57 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g--~~~~~i~~t~g~T~a~~~ 133 (457)
+.+.|+.+.+. +.++.+.+++.+.......+|.. .+..+..+.+.+.+++..| +++++|++|+|+++++.+
T Consensus 25 ~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~~------~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~ 98 (374)
T PRK05839 25 KGLDLTIGEPQFETPKFIQDALKNNAHLLNKYPKS------AGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFN 98 (374)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHhhccCCCCCC------CCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHH
Confidence 66777776665 56777888877654322111111 1112344445555556556 578899999999999988
Q ss_pred HHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCC--CCCCHHHHHHhcCCCceEEEEecccccccc
Q 040741 134 SIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGAD--GIVNLDELRAAIRPDTGLISVMAVNNEIGV 211 (457)
Q Consensus 134 al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~--~~~d~~~le~~i~~~t~li~i~~~~~~~G~ 211 (457)
++..++. .++|+.|+++.+.|+.+...++.. |++++.++.+.+ ..+|+++. .+ +++++|+++++|||||.
T Consensus 99 ~~~~~~~--~~~gd~vlv~~P~y~~~~~~~~~~---g~~v~~v~~~~~~~~~~d~~~~--~~-~~~k~v~i~nP~NPTG~ 170 (374)
T PRK05839 99 FPQFVLF--DKQNPTIAYPNPFYQIYEGAAIAS---RAKVLLMPLTKENDFTPSLNEK--EL-QEVDLVILNSPNNPTGR 170 (374)
T ss_pred HHHHHhc--CCCCCEEEECCCCchhhHHHHHhc---CCEEEEeecccccCCcCCcchh--hh-ccccEEEEeCCCCCcCc
Confidence 8777641 047899999999999998887665 999999998743 34444433 23 46899999999999999
Q ss_pred ccC---hHHHHHHHHhcCCcEEEehhhhcCCC--cc-c---------CCCCcccEEEeccccccCCCC--ceEEEEecCC
Q 040741 212 IQP---MEEIGQICKEFKIPFHTDAAQALGKI--PV-D---------VEKWNVSLMSLSGHKIYGPKG--VGALYMRRRP 274 (457)
Q Consensus 212 ~~~---l~~i~~l~~~~~v~li~D~a~~~g~~--~~-~---------~~~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~ 274 (457)
+.+ +++|+++|+++|++|++|++++--.. +. . ....+.-+++.|++|.||.+| +|+++.+++.
T Consensus 171 ~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~~~ 250 (374)
T PRK05839 171 TLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDASI 250 (374)
T ss_pred ccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecCHHH
Confidence 988 66788889999999999999873211 11 1 011234478899999877665 9999998766
Q ss_pred CccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceE
Q 040741 275 RIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNL 354 (457)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 354 (457)
++++....... ....+.....++..++.. .+.+++..++++++++.+.+.|.. . .+.. ..++
T Consensus 251 ~~~~~~~~~~~-------~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~-----~---~p~g--g~fi 312 (374)
T PRK05839 251 LKKYKAYRTYL-------GCASPLPLQKAAAVAWLD-DEHAEFFRNIYAKNLKLAREILGI-----T---IPPA--TFYV 312 (374)
T ss_pred HHHHHHHHhhc-------CCCCChHHHHHHHHHhcc-chHHHHHHHHHHHHHHHHHHhcCC-----C---CCCe--eEEE
Confidence 55554332110 112333333333333321 233566667777777666654422 1 1111 2333
Q ss_pred EEEEccccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 355 NLSFAYVEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 355 ~~~~~~~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
.+.++ +..++...+ +||.+.+|..+.. . ....+++||+++. +.++++.++++|.++++
T Consensus 313 ~~~~~--~~~~~~~~l~~~~gi~v~pg~~f~~--------------~-~~~~~~iRis~~~--~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 313 WLPVD--NDEEFTKKLYQNEGIKVLPGSFLGR--------------N-GIGKGYVRIALVY--DTPKLEKALEIIKTYLE 373 (374)
T ss_pred EEeCC--ChHHHHHHHHHHCCEEEeCchhhCC--------------C-CCCCCeEEEEecC--CHHHHHHHHHHHHHHhh
Confidence 33333 455666655 5899998864321 1 1123899999975 58999999999988764
No 209
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.93 E-value=1.8e-23 Score=209.41 Aligned_cols=334 Identities=16% Similarity=0.132 Sum_probs=216.5
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh------CCCCCcEEEeCChH
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI------GASPKEIIFTSGAT 128 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~------g~~~~~i~~t~g~T 128 (457)
.+.+.|+.+.+. ++++.+.+++.+.+.+...++. ..+|.......++|+.+++++ ++++++|++|+|++
T Consensus 34 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~ 109 (409)
T PRK07590 34 AKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAET----FRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAK 109 (409)
T ss_pred CceEEecCcCCCCCCCHHHHHHHHHHHhcccccCC----ccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHH
Confidence 345777776666 5678889999888764311100 111222234567778888775 67888999999999
Q ss_pred HHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcE-----------EEEEeCCCCCCCCHHHHHHhcCCCc
Q 040741 129 ESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFE-----------ITYLPVGADGIVNLDELRAAIRPDT 197 (457)
Q Consensus 129 ~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~-----------v~~v~~~~~~~~d~~~le~~i~~~t 197 (457)
+++.++ ..+. .+||+|++..+.|+.+...++.. |.+ ++.++.+.++.+.++ ++ .+++
T Consensus 110 ~al~~l-~~~~----~~gd~V~v~~P~Y~~~~~~~~~~---g~~~~~~~~~~~~~~~~v~~~~~~~~~~d-~~---~~~~ 177 (409)
T PRK07590 110 CDTGNI-LDIF----GPDNTIAVTDPVYPVYVDTNVMA---GRTGEANEDGRYSGIVYLPCTAENNFVPE-LP---EEKV 177 (409)
T ss_pred HHHHHH-HHhc----CCCCEEEEeCCCCcchHHHHHHc---CCcccccccccccceeEeecccccCCccc-Cc---ccCc
Confidence 999874 4454 79999999999999999888777 775 888887643322222 11 2578
Q ss_pred eEEEEeccccccccccC---hHHHHHHHHhcCCcEEEehhhhcC----CCcccC---CCC-cccEEEeccccccCCCC--
Q 040741 198 GLISVMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALG----KIPVDV---EKW-NVSLMSLSGHKIYGPKG-- 264 (457)
Q Consensus 198 ~li~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g----~~~~~~---~~~-~~Di~~~s~~K~~g~~G-- 264 (457)
++|++++++||||.+.+ +++|+++|++||++|++|++|+-- ..+..+ ... +.-+++.|++|.+|.+|
T Consensus 178 k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlR 257 (409)
T PRK07590 178 DIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTR 257 (409)
T ss_pred eEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCce
Confidence 99999999999999998 567888899999999999998732 111111 111 23467889999887555
Q ss_pred ceEEEEecCCCcccccc-----ccCCccccccccCCCChhHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHHhhcCC
Q 040741 265 VGALYMRRRPRIRVEPL-----INGGGQERGIRSGTLPTPLIVGFGSACEI-AKKEMDYDHKRITALHDRLLNGIKEKLD 338 (457)
Q Consensus 265 ~G~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~t~~~~~~~al~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 338 (457)
+|+++++++.++++... ...............+.....++..++.. ....+++.++.++++++++.+.|++ .
T Consensus 258 iG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~- 335 (409)
T PRK07590 258 CAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLES-A- 335 (409)
T ss_pred eEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHh-c-
Confidence 99999987765522100 00000000000113344444444444431 2234677788888999999999998 4
Q ss_pred CeEEeCCCCCcccceEEEEEcc-ccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCC
Q 040741 339 GVVVNGSMERRYIGNLNLSFAY-VEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFT 414 (457)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~ 414 (457)
++.+..+.. ..++.+.++. .+..++...+ .||.+.+|..+.. ...+++||++. .
T Consensus 336 ~~~~~~~~g---~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~-----------------~~~~~iRi~~~--~ 393 (409)
T PRK07590 336 GFEVYGGVN---APYIWVKTPDGMSSWDFFDKLLQEANVVGTPGSGFGP-----------------SGEGYFRLSAF--G 393 (409)
T ss_pred CCceecCCc---ceEEEEECCCCCCHHHHHHHHHHHCCEEEeChhHhCC-----------------CCCCEEEEEcc--C
Confidence 565543211 3345555543 3445666544 4899988864421 12379999963 4
Q ss_pred CHHHHHHHHHHHHHH
Q 040741 415 TEAEVDRAIELTVKQ 429 (457)
Q Consensus 415 t~edid~~~~~l~~~ 429 (457)
++++++.++++|.++
T Consensus 394 ~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 394 SRENVLEAMERIKKA 408 (409)
T ss_pred CHHHHHHHHHHHHhh
Confidence 689999999998765
No 210
>PLN02231 alanine transaminase
Probab=99.93 E-value=7.8e-23 Score=208.92 Aligned_cols=327 Identities=15% Similarity=0.139 Sum_probs=217.3
Q ss_pred CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh----C--CCCCcEEEeCChHHHHHHHHHHhhh
Q 040741 67 TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI----G--ASPKEIIFTSGATESNNVSIKGVMH 140 (457)
Q Consensus 67 ~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~----g--~~~~~i~~t~g~T~a~~~al~~~~~ 140 (457)
..+|.++++...+.+.+..+. ... .|.......++|+.+++++ | +++++|++|+|+++|+.+++.+++.
T Consensus 139 ~~fp~~~i~~a~~~l~~~~~~---~~~--~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~ 213 (534)
T PLN02231 139 GLFSADAIERAWQILDQIPGR---ATG--AYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR 213 (534)
T ss_pred ccCCHHHHHHHHHHHHhcCCc---ccc--CcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhcc
Confidence 346666776666665543221 011 1222345667777777766 4 4678899999999999999998872
Q ss_pred hhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC--CCCCCHHHHHHhcCC------CceEEEEeccccccccc
Q 040741 141 FYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA--DGIVNLDELRAAIRP------DTGLISVMAVNNEIGVI 212 (457)
Q Consensus 141 ~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~le~~i~~------~t~li~i~~~~~~~G~~ 212 (457)
.+||.|++..+.|+.+...+... |.+++.++.+. ++.+|+++|++++++ +++++++++++||||.+
T Consensus 214 ---~~gd~Vli~~P~Y~~y~~~~~~~---g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~v 287 (534)
T PLN02231 214 ---SEKDGILCPIPQYPLYSASIALH---GGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQV 287 (534)
T ss_pred ---CCCCEEEEeCCCChhHHHHHHHc---CCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcC
Confidence 47999999999999998887766 99999998874 357999999999865 68889999999999999
Q ss_pred cC---hHHHHHHHHhcCCcEEEehhhhcCCC----cc-cCCC---------Cc-ccEEEecccc-ccCCCC--ceEEEE-
Q 040741 213 QP---MEEIGQICKEFKIPFHTDAAQALGKI----PV-DVEK---------WN-VSLMSLSGHK-IYGPKG--VGALYM- 270 (457)
Q Consensus 213 ~~---l~~i~~l~~~~~v~li~D~a~~~g~~----~~-~~~~---------~~-~Di~~~s~~K-~~g~~G--~G~l~~- 270 (457)
++ +++|+++|++||++||+|++|.--.. ++ .+.. .+ .-+.+.|++| ++|.+| +||+.+
T Consensus 288 ls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~ 367 (534)
T PLN02231 288 LAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVT 367 (534)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEe
Confidence 87 67889999999999999999873211 11 1110 01 1255669999 566444 899987
Q ss_pred --ecCCCccccccccCCccccccccCCCChhHHHHHHHHHH-------HH---HHhhHHHHHHHHHHHHHHHHHHhhcCC
Q 040741 271 --RRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACE-------IA---KKEMDYDHKRITALHDRLLNGIKEKLD 338 (457)
Q Consensus 271 --~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~-------~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~ 338 (457)
+++.++.+..... .. .+.+.....++..+++ .. .++.+++.+.++++++.+.+.|.+ ++
T Consensus 368 ~~~~~l~~~l~k~~~-------~~-~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~-~~ 438 (534)
T PLN02231 368 GFTSDVREQIYKVAS-------VN-LCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNS-LE 438 (534)
T ss_pred cCCHHHHHHHHHHHh-------hh-cCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 3444444433221 11 1334444443333442 11 123445678899999999999998 78
Q ss_pred CeEEeCCCCCcccceEE--EEEcc--c---------cchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCC
Q 040741 339 GVVVNGSMERRYIGNLN--LSFAY--V---------EGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMA 402 (457)
Q Consensus 339 ~~~~~~~~~~~~~~~~~--~~~~~--~---------~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~ 402 (457)
++.+..+ +. ..+++ +.++. . .+..+...| .||++.+|..|.. ..+
T Consensus 439 gi~~~~p-~G--gfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~----------------~~g 499 (534)
T PLN02231 439 GVTCNKA-EG--AMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQ----------------VPG 499 (534)
T ss_pred CceecCC-Ce--eeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCC----------------CCC
Confidence 8887653 22 11111 12121 0 011222323 5999999976532 112
Q ss_pred CCeEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 403 HTSIRFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 403 ~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
..++|+++. .++++++..+++|.++++++.
T Consensus 500 ~~~~Rit~~--~~~e~l~eal~RL~~~~~~~~ 529 (534)
T PLN02231 500 TWHFRCTIL--PQEDKIPAIVSRLTEFHKSFM 529 (534)
T ss_pred CCeEEEEeC--CCHHHHHHHHHHHHHHHHHHH
Confidence 357999985 578999999999999888763
No 211
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.92 E-value=2.4e-23 Score=207.94 Aligned_cols=308 Identities=14% Similarity=0.148 Sum_probs=211.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHH-HHhcCcEEEEEeC
Q 040741 100 EVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRH-LQQEGFEITYLPV 178 (457)
Q Consensus 100 ~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~-~~~~G~~v~~v~~ 178 (457)
.+....+++.++++.|.+. .+++++|+.|+.+++.++. ++|++||++...|.+....... +...|+++++++.
T Consensus 62 ~p~~~~le~~lA~l~g~~~--al~~~SG~~Ai~~al~all----~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (427)
T PRK05994 62 NPTNAVLEERVAALEGGTA--ALAVASGHAAQFLVFHTLL----QPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA 135 (427)
T ss_pred CccHHHHHHHHHHHhCCCc--EEEEcCHHHHHHHHHHHHh----CCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC
Confidence 4567889999999999875 8899999999999999987 8999999999999887665443 4566999999986
Q ss_pred CCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEecccc
Q 040741 179 GADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHK 258 (457)
Q Consensus 179 ~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K 258 (457)
+ |++++++++++++++|++++++||+|.+.|+++|.++|+++|+++++|++++.+... .....++|+++.|++|
T Consensus 136 ~-----d~~~l~~ai~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~-~pl~~gaDivv~S~tK 209 (427)
T PRK05994 136 D-----DPASFERAITPRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLI-RPIEHGADIVVHSLTK 209 (427)
T ss_pred C-----CHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccC-CccccCCcEEEEcCcc
Confidence 5 899999999999999999999999999999999999999999999999999876543 3335689999999999
Q ss_pred ccCCCC--ceEEEEecCCCcc----ccccccC----C-c--c------------c----cccccCCCChhHHHHHHHHHH
Q 040741 259 IYGPKG--VGALYMRRRPRIR----VEPLING----G-G--Q------------E----RGIRSGTLPTPLIVGFGSACE 309 (457)
Q Consensus 259 ~~g~~G--~G~l~~~~~~~~~----~~~~~~~----~-~--~------------~----~~~~~~t~~~~~~~al~~al~ 309 (457)
++|+.| +|.+++....... ..+.+.. . + . . ........++..++-+..
T Consensus 210 ~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~--- 286 (427)
T PRK05994 210 FLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLILT--- 286 (427)
T ss_pred ccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHc---
Confidence 776543 5555553221110 0000000 0 0 0 0 000011111111111111
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCC---C------------CcccceEEEEEccc--cchHHHhccc-
Q 040741 310 IAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSM---E------------RRYIGNLNLSFAYV--EGESLLMGLK- 371 (457)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~------------~~~~~~~~~~~~~~--~~~~~~~~l~- 371 (457)
-.+.++.++++..+++.++.+.|++ .|.+.-+-.| . ..+++++.|.+.+- ....++..|+
T Consensus 287 -~l~tL~~r~~~~~~~a~~la~~L~~-~p~v~~v~yP~l~~~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~~~~~~l~l 364 (427)
T PRK05994 287 -GIETLPLRMQRHSDNALAVAEWLKG-HPKVSWVNYAGLPDDPYHALAQKYSPKGAGAVFTFGLKGGYEAGVKLVSSLKL 364 (427)
T ss_pred -CcccHHHHHHHHHHHHHHHHHHHHh-CCCccEEECCCCCCCccHHHHHHhcCCCceEEEEEEecCCHHHHHHHHHhCCc
Confidence 1124788889999999999999998 7876432111 1 23466777777531 1235555553
Q ss_pred -CeEecccCccC----CCCCChhH----HHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 372 -EVAVSSGSACT----SASLEPSY----VLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 372 -~i~~~~g~~~~----~~~~~~~~----~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
.++++-|...+ +....+.. ..+..|+.+ +.|||+++. ||.|.+++.|++++++
T Consensus 365 ~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~----~liRlsvGl----E~~~dli~dl~~Al~~ 426 (427)
T PRK05994 365 FSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGP----DVVRLSIGI----EDVDDIIADLEQALAK 426 (427)
T ss_pred ceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCC----CcEEEEecc----CCHHHHHHHHHHHHhh
Confidence 55555665433 22222211 223466654 799999997 7888889988888763
No 212
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.92 E-value=1.4e-23 Score=205.46 Aligned_cols=307 Identities=13% Similarity=0.083 Sum_probs=214.9
Q ss_pred chhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHH-HHHHhcCcE
Q 040741 94 LFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSC-RHLQQEGFE 172 (457)
Q Consensus 94 ~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~-~~~~~~G~~ 172 (457)
.|+....+....+++.++.+-+.+. .+++++|++|+..++.++. ++||+||++.+.|+++...+ ..++..|++
T Consensus 57 ~YsR~gnPt~~~Le~~la~le~~~~--~v~~sSG~aAi~~~l~all----~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~ 130 (395)
T PRK05967 57 TYGTRGTPTTDALCKAIDALEGSAG--TILVPSGLAAVTVPFLGFL----SPGDHALIVDSVYYPTRHFCDTMLKRLGVE 130 (395)
T ss_pred ccCCCCChHHHHHHHHHHHHhCCCC--EEEECcHHHHHHHHHHHhc----CCCCEEEEccCCcHHHHHHHHHHHHhcCeE
Confidence 3444455788889999999887543 6777779999999999998 89999999999999987655 345677999
Q ss_pred EEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEE
Q 040741 173 ITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLM 252 (457)
Q Consensus 173 v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~ 252 (457)
+.+++.+ +.++++++++++|++|++++++||++.+.|+++|+++|+++|+++++|++++.+. .....++|+|++
T Consensus 131 v~~vd~~-----~~e~l~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~-~~~pl~~GaDiv 204 (395)
T PRK05967 131 VEYYDPE-----IGAGIAKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPL-YFRPLDFGVDIS 204 (395)
T ss_pred EEEeCCC-----CHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCce-ecChhHcCCCEE
Confidence 9998654 4688999999999999999999999999999999999999999999999998653 234455789999
Q ss_pred EeccccccCCCC---ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 040741 253 SLSGHKIYGPKG---VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRL 329 (457)
Q Consensus 253 ~~s~~K~~g~~G---~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l 329 (457)
+.|.+|++++-| .|+++.+++..+++..... ....+.++..+..+... .+.+.-++++..+++..+
T Consensus 205 v~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~-------~~G~~~~p~da~l~~rg----l~Tl~lR~~~~~~na~~l 273 (395)
T PRK05967 205 IHAATKYPSGHSDILLGTVSANEKCWPQLLEAHG-------TLGLCAGPDDTYQILRG----LRTMGIRLEHHRKSALEI 273 (395)
T ss_pred EEecccccCCCCCeeEEEEEcCHHHHHHHHHHHH-------HcCCCCCHHHHHHHHcC----cccHHHHHHHHHHHHHHH
Confidence 999999755433 5766665543333322111 11124444443322222 224677888889999999
Q ss_pred HHHHhhcCCCeE-EeCCC--C-----------CcccceEEEEEccc------cchHHHhccc--CeEecccCccCCCC--
Q 040741 330 LNGIKEKLDGVV-VNGSM--E-----------RRYIGNLNLSFAYV------EGESLLMGLK--EVAVSSGSACTSAS-- 385 (457)
Q Consensus 330 ~~~l~~~~~~~~-~~~~~--~-----------~~~~~~~~~~~~~~------~~~~~~~~l~--~i~~~~g~~~~~~~-- 385 (457)
.+.|++ .|.+. |+-+. . ...++++.|.+++- ....++..|+ .++++-|...+...
T Consensus 274 A~~L~~-hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sLi~~~ 352 (395)
T PRK05967 274 ARWLEG-RPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAHAFLDALEIFGLGYSWGGYESLALHV 352 (395)
T ss_pred HHHHHh-CCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHHHHHHhCCcceEccCCCCcceeeeeC
Confidence 999998 77762 32221 1 13467777887521 1235666664 45555565443221
Q ss_pred -CChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 386 -LEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 386 -~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
+.+.. ....|+. ++.|||+++. ||.|.+++.|+++++.+
T Consensus 353 ~~~~~~-~~~~~~~----~~liRlSvGl----Ed~~dLi~Dl~~Al~~~ 392 (395)
T PRK05967 353 KLGDRT-VAKAPYA----GPVIRLQIGL----EDVPDLKADLERGFAAA 392 (395)
T ss_pred CCChhH-hhhccCC----CCeEEEEecc----CCHHHHHHHHHHHHHhh
Confidence 11111 1122333 3799999997 78888999999888754
No 213
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.92 E-value=1.1e-22 Score=204.81 Aligned_cols=299 Identities=17% Similarity=0.220 Sum_probs=212.4
Q ss_pred HHHHHHHHHHHHh----C--CCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEE
Q 040741 102 AVETARSQIADLI----G--ASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITY 175 (457)
Q Consensus 102 ~~~~~~~~la~~~----g--~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~ 175 (457)
...++++.+++++ | +++++|++|+|+++|++++++.+. ++||.|++.+++|.....+.+.. |++++.
T Consensus 133 G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~----~pGd~v~vE~PtY~~~~~~~~~~---g~~~~~ 205 (459)
T COG1167 133 GLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLL----DPGDTVLVEDPTYPGALQALEAL---GARVIP 205 (459)
T ss_pred CcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhC----CCCCEEEEcCCCcHHHHHHHHHc---CCcEEe
Confidence 4445555555554 4 467789999999999999999999 89999999888888877776665 999999
Q ss_pred EeCCCCCCCCHHHHHHhcCC-Cce-EEEEeccccccccccChH---HHHHHHHhcCCcEEEehhhhcCCC----c---cc
Q 040741 176 LPVGADGIVNLDELRAAIRP-DTG-LISVMAVNNEIGVIQPME---EIGQICKEFKIPFHTDAAQALGKI----P---VD 243 (457)
Q Consensus 176 v~~~~~~~~d~~~le~~i~~-~t~-li~i~~~~~~~G~~~~l~---~i~~l~~~~~v~li~D~a~~~g~~----~---~~ 243 (457)
||++.+| +|+++|++++.. +++ +++++..+||||..++++ +|.++|++||++||+|+.++.-.. + ..
T Consensus 206 vp~d~~G-~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ 284 (459)
T COG1167 206 VPVDEDG-IDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKA 284 (459)
T ss_pred cCCCCCC-CCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHh
Confidence 9999666 799999999976 344 556788999999999965 699999999999999999974221 1 12
Q ss_pred CCCCcccEEEeccccccCCC-CceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHH--HHHHhhHHHHH
Q 040741 244 VEKWNVSLMSLSGHKIYGPK-GVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACE--IAKKEMDYDHK 320 (457)
Q Consensus 244 ~~~~~~Di~~~s~~K~~g~~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~--~~~~~~~~~~~ 320 (457)
.+..+.-++++||||...|. ++||+++.++.++++....... .. .++.....++..-+. .+...+.++++
T Consensus 285 ld~~~rViy~gSFSK~l~PglRlG~vv~p~~~~~~~~~~k~~~------~~-~~s~~~Q~~la~~l~~G~~~~hl~~lR~ 357 (459)
T COG1167 285 LDAPGRVIYLGSFSKTLAPGLRLGYVVAPPELIEKLLRLKQAA------DL-GPSSLSQAALAAFLLSGHYDRHLRRLRR 357 (459)
T ss_pred hCCCCCEEEEeeehhhcccccceeeeeCCHHHHHHHHHHHHHh------cC-CCChHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 22335668999999965543 6999999987776665443221 11 233333233322222 23445889999
Q ss_pred HHHHHHHHHHHHHhhcCC-CeEEeCCCCCcccceEEEEEcc-ccchHHHhcc--cCeEecc-cCccCCCCCChhHHHHHc
Q 040741 321 RITALHDRLLNGIKEKLD-GVVVNGSMERRYIGNLNLSFAY-VEGESLLMGL--KEVAVSS-GSACTSASLEPSYVLRAL 395 (457)
Q Consensus 321 ~~~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l--~~i~~~~-g~~~~~~~~~~~~~l~~~ 395 (457)
.+++.++.+.+.|++..+ .+.+..+ .. +..+.+.++. .+...+.... +|+.+.+ |..+...
T Consensus 358 ~y~~rr~~l~~~L~~~~~~~~~~~~p-~g--G~flwl~l~~~~~~~~l~~~a~~~gv~i~~~g~~f~~~----------- 423 (459)
T COG1167 358 EYARRRDALLEALAEYLPELATWTRP-EG--GLFLWLELPEGIDARELLAAALEKGVVVTPLGSAFSAD----------- 423 (459)
T ss_pred HHHHHHHHHHHHHHHhCCCCeeeecC-Cc--eEEEEEEcCCCCCHHHHHHHHHHCCCEEEcCCccccCC-----------
Confidence 999999999999999445 4444443 21 2233334432 3444555544 6888888 7655431
Q ss_pred CCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 396 GVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 396 g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
. ...+.+||+++... .+++++.++.|.+++++..
T Consensus 424 ---~-~~~~~~Rl~~s~~~-~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 424 ---G-DPRNGLRLSFSSPS-EEEIEEGIKRLAALLREAA 457 (459)
T ss_pred ---C-CCCCeEEEEcCCCC-HHHHHHHHHHHHHHHHHHh
Confidence 1 13469999999854 8999999999999988764
No 214
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.92 E-value=2.6e-23 Score=205.17 Aligned_cols=310 Identities=15% Similarity=0.122 Sum_probs=204.8
Q ss_pred CcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh----C---CCCCcEEEeCChH
Q 040741 57 RPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI----G---ASPKEIIFTSGAT 128 (457)
Q Consensus 57 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~----g---~~~~~i~~t~g~T 128 (457)
+.+.|..+.+. +.++.+.+++.+.... .+++. . ....++++.+++++ | ++++++++|+|++
T Consensus 28 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~-~~Y~~------~----~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~ 96 (364)
T PRK07865 28 GIVDLSVGTPVDPVPPVIQEALAAAADA-PGYPT------T----AGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSK 96 (364)
T ss_pred CEEEcCCCCCCCCCCHHHHHHHHHHHhh-CCCCC------c----cCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChH
Confidence 44666665543 4467778887665421 11111 1 12334555555555 4 5688999999999
Q ss_pred HHHHHHHHHh-hhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEecccc
Q 040741 129 ESNNVSIKGV-MHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNN 207 (457)
Q Consensus 129 ~a~~~al~~~-~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~ 207 (457)
+++.+++..+ + ++|+.|+++.+.|+.+..+++.. |+++..++ ++++++ ..++++|++++++|
T Consensus 97 ~~i~~~~~~l~~----~~gd~Vl~~~p~y~~~~~~~~~~---g~~~~~~~-------~~~~l~---~~~~~~v~~~~p~N 159 (364)
T PRK07865 97 ELVAWLPTLLGL----GPGDVVVIPELAYPTYEVGARLA---GATVVRAD-------SLTELG---PQRPALIWLNSPSN 159 (364)
T ss_pred HHHHHHHHHHcC----CCCCEEEECCCCcccHHHHHHhc---CCEEEecC-------ChhhCC---cccceEEEEcCCCC
Confidence 9999877776 5 79999999999999998887766 99888774 233332 25788999999999
Q ss_pred ccccccC---hHHHHHHHHhcCCcEEEehhhhcCCC---ccc-CC------CCcccEEEeccccccCCCC--ceEEEEec
Q 040741 208 EIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKI---PVD-VE------KWNVSLMSLSGHKIYGPKG--VGALYMRR 272 (457)
Q Consensus 208 ~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~---~~~-~~------~~~~Di~~~s~~K~~g~~G--~G~l~~~~ 272 (457)
|||.+.+ +++|.++|+++|+++++|++|+.... +.. .. ..+..+++.|++|.+|.+| +|+++.++
T Consensus 160 PtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~ 239 (364)
T PRK07865 160 PTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDP 239 (364)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCH
Confidence 9999988 56788889999999999999974211 111 00 1124588999999887555 89999887
Q ss_pred CCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccc
Q 040741 273 RPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIG 352 (457)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 352 (457)
+.+.++....... ....+.....++..++.. .+.+++.++.++++++.+.+.|++ . ++.+..+.. +.
T Consensus 240 ~~~~~~~~~~~~~-------~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---~~ 306 (364)
T PRK07865 240 ALVAELLEVRKHA-------GMMVPAPVQAAMVAALGD-DAHVREQRERYARRRAVLRPALEA-A-GFRVDHSEA---GL 306 (364)
T ss_pred HHHHHHHHHHHhc-------CCCcCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHH-c-CCcccCCCc---cE
Confidence 7666554332111 113444444444444432 234667778888889999999988 4 665543321 22
Q ss_pred eEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHH
Q 040741 353 NLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTV 427 (457)
Q Consensus 353 ~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~ 427 (457)
++.+.+. .+...+...+ +||.+.+|..+.. ...+++||+++. +++++++++++|+
T Consensus 307 ~~~~~~~-~~~~~~~~~l~~~gv~v~pg~~f~~-----------------~~~~~iRi~~~~--~~~~~~~~~~~l~ 363 (364)
T PRK07865 307 YLWATRG-EDCWDTVAWLAERGILVAPGDFYGP-----------------AGAQHVRVALTA--TDERIAAAVERLA 363 (364)
T ss_pred EEEEeCC-CCHHHHHHHHHHCCEEEeCccccCc-----------------CCCCEEEEEecC--CHHHHHHHHHHhh
Confidence 2333332 3334555555 6999988764321 113799999985 5899999998875
No 215
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.92 E-value=2.3e-23 Score=205.12 Aligned_cols=304 Identities=17% Similarity=0.144 Sum_probs=209.3
Q ss_pred chhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHH-HHHHhcCcE
Q 040741 94 LFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSC-RHLQQEGFE 172 (457)
Q Consensus 94 ~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~-~~~~~~G~~ 172 (457)
.|+...++...++++.++++.|.+. .+++++|+.++.+++ .+. ++||+|+++.+.|.+..... +.+...|++
T Consensus 43 ~y~r~~~p~~~~Le~~lA~l~g~~~--~~~~~sG~aai~~~~-~~l----~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~ 115 (377)
T PRK07671 43 EYSRTGNPTRAALEELIAVLEGGHA--GFAFGSGMAAITAVM-MLF----SSGDHVILTDDVYGGTYRVMTKVLNRFGIE 115 (377)
T ss_pred CcCCCCChHHHHHHHHHHHHhCCCc--eEEeCCHHHHHHHHH-HHh----CCCCEEEECCCccchHHHHHHHHHhcCCeE
Confidence 3444455788999999999999865 677788888877654 455 78999999999998665543 344566999
Q ss_pred EEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEE
Q 040741 173 ITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLM 252 (457)
Q Consensus 173 v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~ 252 (457)
+++++.. |+++++++++++|++|++++++||+|.+.++++|.++|+++|+++++|++++.+.... ...+++|++
T Consensus 116 v~~v~~~-----d~~~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~-p~~~g~Div 189 (377)
T PRK07671 116 HTFVDTS-----NLEEVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQS-PISLGADIV 189 (377)
T ss_pred EEEECCC-----CHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccCC-hhhhCCeEE
Confidence 9998754 8999999999999999999999999999999999999999999999999997543322 224578999
Q ss_pred EeccccccC-CCC--ceEEEEecC-CCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 040741 253 SLSGHKIYG-PKG--VGALYMRRR-PRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDR 328 (457)
Q Consensus 253 ~~s~~K~~g-~~G--~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~ 328 (457)
+.|++|++| +.+ .|+++++++ ..+++....... .+..++.....+... ...+..++++..+++.+
T Consensus 190 v~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~-------g~~~~~~~a~l~~~~----l~tl~~R~~~~~~na~~ 258 (377)
T PRK07671 190 LHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNST-------GGILGPQDSWLLLRG----LKTLGIRMEEHETNSRA 258 (377)
T ss_pred EecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhh-------cCCCCHHHHHHHHcC----cChHHHHHHHHHHHHHH
Confidence 999999765 432 466766543 333333222111 123333332222111 12366788888899999
Q ss_pred HHHHHhhcCCCeEEeCCCC--------------CcccceEEEEEccc-cchHHHhccc--CeEecccCccC----CCCCC
Q 040741 329 LLNGIKEKLDGVVVNGSME--------------RRYIGNLNLSFAYV-EGESLLMGLK--EVAVSSGSACT----SASLE 387 (457)
Q Consensus 329 l~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~-~~~~~~~~l~--~i~~~~g~~~~----~~~~~ 387 (457)
+.+.|++ .|++.-+-.+. ...++++.|.+.+. ....++..|+ .++++-|...+ +....
T Consensus 259 la~~L~~-~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~ 337 (377)
T PRK07671 259 IAEFLNN-HPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVGSEETANKVLERLQYFTLAESLGAVESLISIPSQMT 337 (377)
T ss_pred HHHHHHc-CCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEeCCHHHHHHHHHhCCcceEccCCCCCCeEeECCCccc
Confidence 9999998 77763332111 23467777777321 1234555553 55666666533 22221
Q ss_pred hh----HHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHH
Q 040741 388 PS----YVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 388 ~~----~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~ 430 (457)
+. -.....|+.+ +.|||+++. ||.+.+++.|++++
T Consensus 338 ~~~~~~~~~~~~gi~~----~liR~svGl----E~~~dl~~dl~~al 376 (377)
T PRK07671 338 HASIPADRRKELGITD----GLIRISVGI----EDGEDLIEDLAQAL 376 (377)
T ss_pred cccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHh
Confidence 11 1234566665 899999997 78888888888876
No 216
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.92 E-value=2e-22 Score=201.30 Aligned_cols=327 Identities=16% Similarity=0.159 Sum_probs=215.3
Q ss_pred CCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCChH
Q 040741 56 GRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGAS-PKEIIFTSGAT 128 (457)
Q Consensus 56 ~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~i~~t~g~T 128 (457)
.+.-|+|+.+. ++.+|++.+++.+.+.... ... ..+. .+...++.+.++++++.+ +++++|++||+
T Consensus 41 dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~-~~~---~~~~---~~~~~~la~~l~~~~~~~~~~~v~~~~sgs 113 (398)
T PRK03244 41 DGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLG-HVS---NLFA---TEPQIALAERLVELLGAPEGGRVFFCNSGA 113 (398)
T ss_pred CCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcc-Ccc---CccC---CHHHHHHHHHHHHhCCCCCCCEEEEeCchH
Confidence 34457887652 2347999999999887532 111 1111 134468999999999864 46899999999
Q ss_pred HHHHHHHHHhhhhhcCCCCEEEE-cCCCCcchHHHHHHHHhc---------CcEEEEEeCCCCCCCCHHHHHHhcCCCce
Q 040741 129 ESNNVSIKGVMHFYKDKKRHVIT-TQTEHKCVLDSCRHLQQE---------GFEITYLPVGADGIVNLDELRAAIRPDTG 198 (457)
Q Consensus 129 ~a~~~al~~~~~~~~~~g~~vi~-~~~~h~~~~~~~~~~~~~---------G~~v~~v~~~~~~~~d~~~le~~i~~~t~ 198 (457)
+|+..+++.+... + ++.|+. ....|.....+....... +.++..++. .|+++++++++++++
T Consensus 114 ea~~~al~~~~~~--g-~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~~~~~ 185 (398)
T PRK03244 114 EANEAAFKLARLT--G-RTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-----GDVDALAAAVDDDTA 185 (398)
T ss_pred HHHHHHHHHHHHH--C-CCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-----CCHHHHHHhhcCCeE
Confidence 9999999977641 2 244544 444555544443332100 112233332 389999999988899
Q ss_pred EEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhhc-CCC--cc--cCCCCcccEEEeccccccC-CCCceEE
Q 040741 199 LISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQAL-GKI--PV--DVEKWNVSLMSLSGHKIYG-PKGVGAL 268 (457)
Q Consensus 199 li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~~-g~~--~~--~~~~~~~Di~~~s~~K~~g-~~G~G~l 268 (457)
+|+++.++|++|.+.| +++|.++|++||+++|+|++++. |.. .+ ......+|++++ +|.+| +-++|++
T Consensus 186 aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi~t~--sK~l~~G~~ig~~ 263 (398)
T PRK03244 186 AVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDVVTL--AKGLGGGLPIGAC 263 (398)
T ss_pred EEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCCEEEE--chhhhCCcccEEE
Confidence 9999999999999988 88999999999999999999862 211 11 222334787655 59655 2348999
Q ss_pred EEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCC
Q 040741 269 YMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMER 348 (457)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 348 (457)
+++++..+.+.....+ ... ..++..+.+..++++.+.+ +...++.+++.+++++.|++ +. ..+.... .
T Consensus 264 ~~~~~~~~~~~~~~~~------~t~-~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~-~~-~~~~~~v-~ 331 (398)
T PRK03244 264 LAFGPAADLLTPGLHG------STF-GGNPVACAAALAVLDTIAS--EGLLENAERLGEQLRAGIEA-LG-HPLVDHV-R 331 (398)
T ss_pred EEcHHHHhhccCCCCc------CCC-CCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHh-cC-CCceeeE-e
Confidence 9988765554432211 111 3455666666677776654 35667888888999999987 42 2111111 1
Q ss_pred cccceEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHH
Q 040741 349 RYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELT 426 (457)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l 426 (457)
..+.++.+.++......+...+ +|+.+.+.. .+.|||+++..++++||++++++|
T Consensus 332 g~g~~~~i~~~~~~~~~~~~~l~~~Gv~~~~~~-----------------------~~~iR~~p~~~~t~~~i~~~~~~l 388 (398)
T PRK03244 332 GRGLLLGIVLTAPVAKAVEAAAREAGFLVNAVA-----------------------PDVIRLAPPLIITDAQVDAFVAAL 388 (398)
T ss_pred eccEEEEEEEeccHHHHHHHHHHHCCeEEeecC-----------------------CCEEEEECCCcCCHHHHHHHHHHH
Confidence 1345555555432334555555 677775421 168999999999999999999999
Q ss_pred HHHHHHHH
Q 040741 427 VKQVEKLR 434 (457)
Q Consensus 427 ~~~~~~~~ 434 (457)
++++++++
T Consensus 389 ~~~l~~~~ 396 (398)
T PRK03244 389 PAILDAAA 396 (398)
T ss_pred HHHHHhcc
Confidence 99998765
No 217
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.92 E-value=1.8e-23 Score=208.35 Aligned_cols=316 Identities=14% Similarity=0.146 Sum_probs=212.9
Q ss_pred chhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHH-HHhcCcE
Q 040741 94 LFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRH-LQQEGFE 172 (457)
Q Consensus 94 ~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~-~~~~G~~ 172 (457)
.|+....+...++++.++++.|.+. .+++++|++|+.+++.++. ++|++|++..+.|.+....+.. +...|++
T Consensus 51 ~y~r~~~pt~~~Le~~lA~l~g~~~--~l~~ssG~~Ai~~al~al~----~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~ 124 (425)
T PRK06084 51 IYTRIMNPTNDVLEQRVAALEGGVG--ALAVASGMAAITYAIQTIA----EAGDNIVSVAKLYGGTYNLLAHTLPRIGIE 124 (425)
T ss_pred cccCCCCchHHHHHHHHHHHhCCCc--eeEehhHHHHHHHHHHHHh----CCCCEEEEeCCCcchHHHHHHHhcccceeE
Confidence 3444445678899999999999754 7889999999999999988 8999999999988866655443 2334778
Q ss_pred EEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEE
Q 040741 173 ITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLM 252 (457)
Q Consensus 173 v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~ 252 (457)
+.+++.. |++++++++++++++|++++++||+|.+.|+++|.++|+++|+++++|++++.+... .....++|++
T Consensus 125 v~~~d~~-----d~e~le~ai~~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~-~p~~~gaDiv 198 (425)
T PRK06084 125 TRFAAHD-----DIAALEALIDERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLC-RPFEHGADIV 198 (425)
T ss_pred EEEECCC-----CHHHHHHHhccCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC-ChhhcCCCEE
Confidence 8777643 899999999999999999999999999999999999999999999999999976543 2235689999
Q ss_pred EeccccccCCCC--ceEEEEecCCCc--ccccc---c-------cCCcccc----------------ccccCCCChhHHH
Q 040741 253 SLSGHKIYGPKG--VGALYMRRRPRI--RVEPL---I-------NGGGQER----------------GIRSGTLPTPLIV 302 (457)
Q Consensus 253 ~~s~~K~~g~~G--~G~l~~~~~~~~--~~~~~---~-------~~~~~~~----------------~~~~~t~~~~~~~ 302 (457)
+.|++|++|..| +|.+++..+... ..... + .+....+ .......++..+.
T Consensus 199 v~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~ 278 (425)
T PRK06084 199 VHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAF 278 (425)
T ss_pred EECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHH
Confidence 999999766433 344444322111 11000 0 0000000 0000112211111
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEe-CC--CC-----------Cc-ccceEEEEEccc--cchH
Q 040741 303 GFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVN-GS--ME-----------RR-YIGNLNLSFAYV--EGES 365 (457)
Q Consensus 303 al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~--~~-----------~~-~~~~~~~~~~~~--~~~~ 365 (457)
.+.. -.+.+..++++..+++.++.+.|++ .|.+.-+ -+ +. .. +++++.|.+.+. ....
T Consensus 279 l~lr----gl~tl~~R~~~~~~na~~la~~L~~-~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg~~s~~~~~~~~~~~~ 353 (425)
T PRK06084 279 LILQ----GLETLALRMERHTENALKVARYLQQ-HPQVAWVKYAGLPDHPEHELARRYMGGKPASILSFGIKGGQAAGAR 353 (425)
T ss_pred HHHc----CcCcHHHHHHHHHHHHHHHHHHHHh-CCCccEEECCCCCCcccHHHHHHhCCCCcceEEEEEecCCHHHHHH
Confidence 1111 1124788889999999999999999 8876432 21 11 12 466777777532 1235
Q ss_pred HHhccc--CeEecccCccC----CCCCChh----HHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 366 LLMGLK--EVAVSSGSACT----SASLEPS----YVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 366 ~~~~l~--~i~~~~g~~~~----~~~~~~~----~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
++..|+ .++++-|...+ +..+.+. -..+..|+++ +.|||+++. ||.|.+++.|+++++..+
T Consensus 354 f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~----~liR~svGl----Ed~~dLi~dl~~Al~~~~ 424 (425)
T PRK06084 354 FIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSR----DMVRLSIGI----EHIDDIIADLAQALDASK 424 (425)
T ss_pred HHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHHhhh
Confidence 666664 44555565433 3222221 1234567665 899999996 889999999999987654
No 218
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.92 E-value=3.5e-23 Score=206.77 Aligned_cols=335 Identities=18% Similarity=0.132 Sum_probs=215.3
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh---CCCCCcEEEeCChHHHH
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI---GASPKEIIFTSGATESN 131 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~---g~~~~~i~~t~g~T~a~ 131 (457)
.+.+.|+.+.+. ++++.+.+++.+.+.+...... ..+|.......++++.+++++ +++++++++|+|+++++
T Consensus 33 ~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al 108 (402)
T TIGR03542 33 ADIIRLGIGDTTQPLPASVIEAFHNAVDELASEET----FRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDV 108 (402)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhccccccc----ccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHH
Confidence 456778777665 5788899999988764321100 011222245677888888876 67888999999999999
Q ss_pred HHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCc-----------EEEEEeCCCCCCCCHHHHHHhcCCCceEE
Q 040741 132 NVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGF-----------EITYLPVGADGIVNLDELRAAIRPDTGLI 200 (457)
Q Consensus 132 ~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~-----------~v~~v~~~~~~~~d~~~le~~i~~~t~li 200 (457)
.++ ..+. .+|+.|++..+.|..+...++.. |+ +++.++.+..+.++++ +++ ..++++|
T Consensus 109 ~~l-~~l~----~~gd~Vlv~~P~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~--~~~~~~i 177 (402)
T TIGR03542 109 FRL-QSLF----GSDNTVAVQDPVYPAYVDSNVMA---GRAGVLDDDGRYSKITYLPCTKENNFIPD-LPE--EPKIDII 177 (402)
T ss_pred HHH-HHhc----CCCCEEEEeCCCCcchHHHHHHc---CCccccccccccceEEEeecchhhCCCCC-ccc--cCCceEE
Confidence 875 4555 68999999999999998877666 88 8888887633222222 111 2578899
Q ss_pred EEeccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCC----CcccC---CC-CcccEEEeccccccCCCC--ceE
Q 040741 201 SVMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGK----IPVDV---EK-WNVSLMSLSGHKIYGPKG--VGA 267 (457)
Q Consensus 201 ~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~----~~~~~---~~-~~~Di~~~s~~K~~g~~G--~G~ 267 (457)
++++++||||.+.+ +++|+++|++||++||+|+++.-.. .+..+ .. .+..+++.|++|.+|.+| +|+
T Consensus 178 ~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~ 257 (402)
T TIGR03542 178 YLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGW 257 (402)
T ss_pred EEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEE
Confidence 99999999999999 7789999999999999999997321 11111 11 123467889999888666 899
Q ss_pred EEEecCCCcccccc-ccCCccccccccCCCChhHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCC
Q 040741 268 LYMRRRPRIRVEPL-INGGGQERGIRSGTLPTPLIVGFGSACEI-AKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGS 345 (457)
Q Consensus 268 l~~~~~~~~~~~~~-~~~~~~~~~~~~~t~~~~~~~al~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 345 (457)
++++++.+...... ...+.........+.+.....++..++.. ....+.+..+.++++++++.+.|++ . ++.+..+
T Consensus 258 ~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~-~~~~~~~ 335 (402)
T TIGR03542 258 TVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEA-A-GFKVYGG 335 (402)
T ss_pred EEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHh-c-CceecCC
Confidence 99987654111000 00000000001112333333333333321 1112445567778888889999988 4 5655432
Q ss_pred CCCcccceEEEEEcc-ccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHH
Q 040741 346 MERRYIGNLNLSFAY-VEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDR 421 (457)
Q Consensus 346 ~~~~~~~~~~~~~~~-~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~ 421 (457)
. ...++.+.++. .+..++...+ .||.+.+|..+.. ...+++||++.. ++++++.
T Consensus 336 ~---~~~f~~v~l~~~~~~~~l~~~l~~~~gv~v~pg~~f~~-----------------~~~~~iRis~~~--~~~~l~~ 393 (402)
T TIGR03542 336 E---HAPYLWVKTPEGISSWDFFDFLLYQYHVVGTPGSGFGP-----------------SGEGFVRFSAFG--KRENIVE 393 (402)
T ss_pred C---ceeEEEEECCCCCCHHHHHHHHHHhCCEEEeCchhhCC-----------------CCCCEEEEEecC--CHHHHHH
Confidence 1 13455555543 3455666654 4899998864321 113799999754 6899999
Q ss_pred HHHHHHHH
Q 040741 422 AIELTVKQ 429 (457)
Q Consensus 422 ~~~~l~~~ 429 (457)
++++|+++
T Consensus 394 ~l~~l~~~ 401 (402)
T TIGR03542 394 ACERIKEA 401 (402)
T ss_pred HHHHHHhh
Confidence 99988765
No 219
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.92 E-value=2.6e-23 Score=202.17 Aligned_cols=270 Identities=18% Similarity=0.178 Sum_probs=193.2
Q ss_pred HHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCC
Q 040741 103 VETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADG 182 (457)
Q Consensus 103 ~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~ 182 (457)
..++++++++++|.+++++++|+|+++++.++... . .+| .|++..+.|..+...++. .|.+++.++
T Consensus 49 ~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~-l----~~g-~vl~~~p~y~~~~~~~~~---~g~~~~~~~----- 114 (330)
T TIGR01140 49 YDELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRL-L----APG-RVLVLAPTYSEYARAWRA---AGHEVVELP----- 114 (330)
T ss_pred HHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHH-h----CCC-eEEEeCCCcHHHHHHHHH---cCCEEEEeC-----
Confidence 48899999999999888999999999999886554 4 466 688888888887766554 499998887
Q ss_pred CCCHHHHHHhcCCCceEEEEeccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCCCcccC----CCCcccEEEec
Q 040741 183 IVNLDELRAAIRPDTGLISVMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKIPVDV----EKWNVSLMSLS 255 (457)
Q Consensus 183 ~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~~~~~----~~~~~Di~~~s 255 (457)
|+++++++++ +++++++++++||+|.+.+ +++|+++|+++|+++++|+++.......++ ...+.++++.|
T Consensus 115 --d~~~l~~~~~-~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S 191 (330)
T TIGR01140 115 --DLDRLPAALE-ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRS 191 (330)
T ss_pred --CHHHHHhhcc-cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEe
Confidence 7899999984 6778999999999999999 667888899999999999999633222111 12245789999
Q ss_pred cccccCCCC--ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 040741 256 GHKIYGPKG--VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGI 333 (457)
Q Consensus 256 ~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l 333 (457)
++|.+|.+| +|+++++++.+.++...... .+.+.....++...++. .+..+...++++++.+.+.+.|
T Consensus 192 ~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~---------~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L 261 (330)
T TIGR01140 192 LTKFFGLAGLRLGFVVAHPALLARLREALGP---------WTVNGPARAAGRAALAD-TAWQAATRARLAAERARLAALL 261 (330)
T ss_pred cchhhcCchhhhhheeCCHHHHHHHHhcCCC---------CCchHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHH
Confidence 999888666 79999988766665544321 13344444434333331 1124677888899999999999
Q ss_pred hhcCCCeEEeCCCCCcccceEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecC
Q 040741 334 KEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIG 411 (457)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~ 411 (457)
++ ++.+++.+. ...++.+.++ +..++.+.| +||.+.+|..+. ....++|||+++
T Consensus 262 ~~-~~~~~~~~~----~~~f~~~~~~--~~~~l~~~l~~~gi~v~pg~~f~-----------------~~~~~~iRi~~~ 317 (330)
T TIGR01140 262 AR-LGGLEVVGG----TALFLLVRTP--DAAALHEALARRGILIRDFDNFP-----------------GLDPRYLRFALP 317 (330)
T ss_pred Hh-CCCceECCC----CCeEEEEEcC--CHHHHHHHHHHCCEEEEECCCCC-----------------CCCCCEEEEEec
Confidence 99 766665432 1333333333 455666666 699999987541 112369999997
Q ss_pred CCCCHHHHHHHHHHH
Q 040741 412 RFTTEAEVDRAIELT 426 (457)
Q Consensus 412 ~~~t~edid~~~~~l 426 (457)
. ..++ ++++++|
T Consensus 318 ~--~~~~-~~~~~~l 329 (330)
T TIGR01140 318 T--DEEN-DRLEEAL 329 (330)
T ss_pred C--HHHH-HHHHHhh
Confidence 5 3355 7777765
No 220
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=4.9e-23 Score=202.80 Aligned_cols=285 Identities=17% Similarity=0.181 Sum_probs=200.6
Q ss_pred HHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCC-CEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC--
Q 040741 103 VETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKK-RHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG-- 179 (457)
Q Consensus 103 ~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g-~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~-- 179 (457)
..++++.+++++|++++++++|+|+++++.+++.++. .+| +.|+++.+.|..+...++.. |.+++.++.+
T Consensus 61 ~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~----~~g~~~vlv~~p~y~~~~~~~~~~---g~~~~~v~~~~~ 133 (364)
T PRK04781 61 PPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALC----VPGRDAVLVTPPVFGMYAVCARLQ---NAPLVEVPLVDG 133 (364)
T ss_pred HHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhc----CCCCCeEEEcCCChHHHHHHHHHc---CCEEEEEecCCC
Confidence 4689999999999999999999999999999999887 777 78999988877665544444 9999999974
Q ss_pred CCC-CCCHHHHHHh-cCCCceEEEEeccccccccccChHHHHHHHHh--cCCcEEEehhhhcCCCc---cc-CCCCcccE
Q 040741 180 ADG-IVNLDELRAA-IRPDTGLISVMAVNNEIGVIQPMEEIGQICKE--FKIPFHTDAAQALGKIP---VD-VEKWNVSL 251 (457)
Q Consensus 180 ~~~-~~d~~~le~~-i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~--~~v~li~D~a~~~g~~~---~~-~~~~~~Di 251 (457)
.++ .+|+++++++ .++++++|++++++||||.+.+.+++.++++. ++++||+|+++.-.... .. ....+.-+
T Consensus 134 ~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~~~~vi 213 (364)
T PRK04781 134 ADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLARYDNLA 213 (364)
T ss_pred ccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhhCCCEE
Confidence 233 5788887654 46789999999999999999998888877764 47999999998732211 11 11223347
Q ss_pred EEeccccccCCCC--ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHH-HHhhHHHHHHHHHHHHH
Q 040741 252 MSLSGHKIYGPKG--VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIA-KKEMDYDHKRITALHDR 328 (457)
Q Consensus 252 ~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~-~~~~~~~~~~~~~~~~~ 328 (457)
++.|++|.||.+| +|+++++++.++++......+ ..+.....++..+++.. .+...+..+++++.++.
T Consensus 214 ~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~~~---------~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~ 284 (364)
T PRK04781 214 VLRTLSKAHALAAARIGSLIANAELIAVLRRCQAPY---------PVPTPCAALAEQALSAPALAVTARRVAEVRAERER 284 (364)
T ss_pred EEecChhhcccccceeeeeeCCHHHHHHHHhccCCC---------CCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 8899999888555 999999887766655443211 23333333333344322 12344555677888899
Q ss_pred HHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeE
Q 040741 329 LLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSI 406 (457)
Q Consensus 329 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~i 406 (457)
+.+.|++ ++++....+.. +.++.+.++ +...+...+ +||.+.++..+. ...+++
T Consensus 285 l~~~L~~-~~~~~~~~p~~---g~f~~~~~~--~~~~~~~~l~~~gI~v~~~~~~~------------------~~~~~~ 340 (364)
T PRK04781 285 LHAALAQ-LPGVRRVYPSQ---GNFLLVRFD--DAEAAFQALLAAGVVVRDQRAAP------------------RLSDAL 340 (364)
T ss_pred HHHHHHh-CCCCCeECCCC---CcEEEEEcC--CHHHHHHHHHHCCeEEeeCCCCC------------------CCCCeE
Confidence 9999988 77764222221 444445544 345555555 799998875321 113799
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHH
Q 040741 407 RFGIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 407 Ri~~~~~~t~edid~~~~~l~~~~ 430 (457)
||+++. .++.++++++|++..
T Consensus 341 Ris~~~---~~~~~~l~~al~~~~ 361 (364)
T PRK04781 341 RITLGT---PEQNDRVLAALQRTQ 361 (364)
T ss_pred EEeCCC---HHHHHHHHHHHHHHH
Confidence 999984 899999999988643
No 221
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.92 E-value=5.8e-23 Score=189.36 Aligned_cols=342 Identities=16% Similarity=0.146 Sum_probs=235.6
Q ss_pred CcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHH
Q 040741 57 RPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIK 136 (457)
Q Consensus 57 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~ 136 (457)
.+||-. ++..-+...++...+--+..||.. .+...+....+|++++.+-|--. .+.++||..|+..++.
T Consensus 27 ~PIyqt---Tsy~F~d~~haa~lF~l~~~G~iY------sRi~NPT~~vlE~RiAaLEGG~a--a~a~aSG~AA~~~ai~ 95 (426)
T COG2873 27 VPIYQT---TSYVFDDTDHAAALFGLKEPGNIY------TRIMNPTTDVLEERIAALEGGVA--ALAVASGQAAITYAIL 95 (426)
T ss_pred cceeee---eeeecCCHHHHHHHhCCCcCCcee------eeccCchHHHHHHHHHHhhcchh--hhhhccchHHHHHHHH
Confidence 345543 333333344555555545555533 34455788899999999988644 7888999999999999
Q ss_pred HhhhhhcCCCCEEEEcCCCCcchHHHHHHH-HhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccCh
Q 040741 137 GVMHFYKDKKRHVITTQTEHKCVLDSCRHL-QQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPM 215 (457)
Q Consensus 137 ~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~-~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l 215 (457)
.++ ++||+|+.+..-|.+......+. ++.|+++++++.+ |+++++++|+++|++|+++...||.+.+.++
T Consensus 96 ~la----~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~-----d~~~~~~aI~~nTkavf~EtigNP~~~v~Di 166 (426)
T COG2873 96 NLA----GAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPD-----DPENFEAAIDENTKAVFAETIGNPGLDVLDI 166 (426)
T ss_pred Hhc----cCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCC-----CHHHHHHHhCcccceEEEEeccCCCccccCH
Confidence 999 89999999999999999888765 7889999999877 8999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCC--ceEEEEecCCCccc-c----------ccc
Q 040741 216 EEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKG--VGALYMRRRPRIRV-E----------PLI 282 (457)
Q Consensus 216 ~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~~-~----------~~~ 282 (457)
+.|+++||++|+++++|.+.+.+.+ +..-+.++|+++-|.+|+.|.-| +|-+++.....+.- . +.+
T Consensus 167 e~ia~iAh~~gvpliVDNT~atpyl-~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~Y 245 (426)
T COG2873 167 EAIAEIAHRHGVPLIVDNTFATPYL-CRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSY 245 (426)
T ss_pred HHHHHHHHHcCCcEEEecCCCccee-cchhhcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccc
Confidence 9999999999999999999887743 34445689999999999776544 66666665444332 1 111
Q ss_pred cCCcccccc--------------c--cCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCC
Q 040741 283 NGGGQERGI--------------R--SGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSM 346 (457)
Q Consensus 283 ~~~~~~~~~--------------~--~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 346 (457)
+|-.+...+ + ..+.++.....+.. ..+.+.=++++.-+++.++.+.|++ .|.+..+.-+
T Consensus 246 hGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lq----GlETL~LRmerH~~NA~~vA~~L~~-HpkV~~V~Yp 320 (426)
T COG2873 246 HGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQ----GLETLSLRMERHCENALKVAEFLEN-HPKVAWVNYP 320 (426)
T ss_pred cceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHh----chhhhHHHHHHHHHhHHHHHHHHhc-CCCeeeeecC
Confidence 111000000 0 01111111111111 1123677788899999999999999 8887665432
Q ss_pred C---------------CcccceEEEEEccc--cchHHHhc------ccCeEecccCccCCCCCChhH----HHHHcCCCc
Q 040741 347 E---------------RRYIGNLNLSFAYV--EGESLLMG------LKEVAVSSGSACTSASLEPSY----VLRALGVDE 399 (457)
Q Consensus 347 ~---------------~~~~~~~~~~~~~~--~~~~~~~~------l~~i~~~~g~~~~~~~~~~~~----~l~~~g~~~ 399 (457)
. ...+.++.|.+++- .+..++.. +.+|.=.......|++..++. ...+.|+.+
T Consensus 321 gL~~~~~h~la~kyl~~g~g~vltF~~kgg~ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~ 400 (426)
T COG2873 321 GLASHPYHALAKKYLPKGAGAVLTFGVKGGYEAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTP 400 (426)
T ss_pred CCCCCcchhHHHhhccCCCceEEEEEecChHHHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCC
Confidence 1 12356666666542 11333333 345444333444454443322 355677776
Q ss_pred cCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 400 DMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 400 ~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
+.||+|++. ||++.++..|+++++.
T Consensus 401 ----~~IRlSVGI----Ed~~DiiaDl~qAl~~ 425 (426)
T COG2873 401 ----DLIRLSVGI----EDIDDIIADLEQALEA 425 (426)
T ss_pred ----CcEEEEecc----CCHHHHHHHHHHHHhc
Confidence 899999996 8999999999988764
No 222
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.92 E-value=2.2e-23 Score=202.64 Aligned_cols=303 Identities=15% Similarity=0.135 Sum_probs=206.4
Q ss_pred EEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHh
Q 040741 59 LYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGV 138 (457)
Q Consensus 59 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~ 138 (457)
-||+..... ++.++..+.+..+.| ..+.+.++++.+|+++|.+++++++++||++|+..++.++
T Consensus 28 ~ylgl~~~~----~~~~~~~~~~~~~~g------------~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al 91 (346)
T TIGR03576 28 DLTGLAGGF----KIDEEDLELLETYVG------------PAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILAL 91 (346)
T ss_pred ccccCCCCh----hHHHHHHHHHHHhcC------------CHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHh
Confidence 477665544 455555555543311 1278999999999999998888999999999999999999
Q ss_pred hhhhcCCCCEEEEc---CCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccc---
Q 040741 139 MHFYKDKKRHVITT---QTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVI--- 212 (457)
Q Consensus 139 ~~~~~~~g~~vi~~---~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~--- 212 (457)
. ++|++|+++ .+.|+++...++.. |+++... .|+++++. .+++++|+++. .+++|.+
T Consensus 92 ~----~~gd~Vli~~~d~p~~~s~~~~~~l~---ga~~~~~-------~~l~~l~~--~~~~~lIiitg-~s~~G~v~~~ 154 (346)
T TIGR03576 92 E----PPGRKVVHYLPEKPAHPSIPRSCKLA---GAEYFES-------DELSELKK--IDGTSLVVITG-STMDLKVVSE 154 (346)
T ss_pred C----CCCCEEEECCCCCCCchhHHHHHHHc---CCEEecc-------CCHHHHhh--CcCceEEEEEC-CCCCCcccCH
Confidence 8 899999864 56899988888776 8775332 25666543 35678888865 5788988
Q ss_pred cChHHHHHHHHhcCCcEEEehhhhcCCCcc-c---CCCCcccEEEecccccc-CCCCceEEEEecCCCccccccccCCcc
Q 040741 213 QPMEEIGQICKEFKIPFHTDAAQALGKIPV-D---VEKWNVSLMSLSGHKIY-GPKGVGALYMRRRPRIRVEPLINGGGQ 287 (457)
Q Consensus 213 ~~l~~i~~l~~~~~v~li~D~a~~~g~~~~-~---~~~~~~Di~~~s~~K~~-g~~G~G~l~~~~~~~~~~~~~~~~~~~ 287 (457)
.++++|+++|+++|+++++|+||+.+.... + ....+.|+++.|++|.+ |+. +|+++++++.++.+......+.
T Consensus 155 ~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s~SKalaG~r-~G~v~~~~~li~~l~~~~~~~~- 232 (346)
T TIGR03576 155 EDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVVTSTDKLMDGPR-GGLLAGRKELVDKIKSVGEQFG- 232 (346)
T ss_pred HHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHHHcCCcEEEeccchhccccc-eEEEEeCHHHHHHHHHhhcCcc-
Confidence 569999999999999999999999764321 1 11235689999999955 777 5999999877766655443221
Q ss_pred ccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHH-
Q 040741 288 ERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESL- 366 (457)
Q Consensus 288 ~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 366 (457)
. +.+++.+.++.++++... .+...+.++++.+.+.+.+.+ + .+..++ .+++.+.++..+..++
T Consensus 233 -----~-s~~~~~~~aa~~aL~~~~--~~~~~~~l~~r~~~~~~~l~~-~---~~~~~~----~~f~~~~~~~~~~~~~~ 296 (346)
T TIGR03576 233 -----L-EAQAPLLAAVVRALEEFE--LSRIRDAFKRKEEVYLRLFDK-L---NVERTP----TGFVIKGVEEEKLIEIG 296 (346)
T ss_pred -----c-CccHHHHHHHHHHHhhcc--HHHHHHHHHHHHHHHHHHHHh-C---CCCcCC----CeEEEEeCCCCCHHHHH
Confidence 1 345666666677776532 245566777777777777765 3 222221 2344455443222233
Q ss_pred Hhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCC-CHHHHHHHHHHHHHHH
Q 040741 367 LMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFT-TEAEVDRAIELTVKQV 430 (457)
Q Consensus 367 ~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~-t~edid~~~~~l~~~~ 430 (457)
...| +||.+.++..+. ...+++||+++... ++.+.++++++|++.+
T Consensus 297 ~~ll~~~gV~v~~~~~f~------------------~~~~~vRis~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 297 LDLLRNYGIITITAVGMP------------------GASKTLRFDLAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred HHHHHhCCEEEeCCcccC------------------CCCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence 3333 689998865321 11379999998522 2227999999998764
No 223
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.92 E-value=3.7e-22 Score=213.77 Aligned_cols=350 Identities=13% Similarity=0.171 Sum_probs=230.0
Q ss_pred ccccCCCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCcc-chhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCC-hH
Q 040741 51 GVRIAGRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTH-LFGWESEVAVETARSQIADLIGASPKEIIFTSG-AT 128 (457)
Q Consensus 51 ~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g-~T 128 (457)
+......+|.|+. .+....+.+...+...-. +.+-+.... ....+..+...++++++++++|.+. +.+..+ |+
T Consensus 494 n~~~~~~~i~lGs-ct~~~~p~~~~~~~~~~~--f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG~d~--~sl~~~~ga 568 (954)
T PRK05367 494 DLALDRSMIPLGS-CTMKLNAAAEMIPITWPE--FANLHPFAPAEQAAGYRELIDQLEAWLAEITGYDA--VSLQPNAGA 568 (954)
T ss_pred CcCcccceeeCCc-CCCcCCHHHHHHHHhCcc--ccccCCCChHHHHHHHHHHHHHHHHHHHHHHCCCC--EEECccHHH
Confidence 3333566677777 555667666666554421 222121111 2223455889999999999999863 666665 55
Q ss_pred HHHHHHHHHhhhhhcCCC----CEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC---CceEEE
Q 040741 129 ESNNVSIKGVMHFYKDKK----RHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP---DTGLIS 201 (457)
Q Consensus 129 ~a~~~al~~~~~~~~~~g----~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~---~t~li~ 201 (457)
.|+..++.++..++..+| +.|+++...|+++..++..+ |++++.++++.+|.+|+++|++++++ ++..|+
T Consensus 569 ~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~---G~~vv~v~~d~~G~iD~~~L~~~i~~~~~~la~V~ 645 (954)
T PRK05367 569 QGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMA---GMKVVVVACDENGNIDLDDLRAKAEEHADNLAAIM 645 (954)
T ss_pred HHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHC---CCEEEEECCCCCCCcCHHHHHHHHhccCCCeEEEE
Confidence 566566655554433444 46999999999998877655 99999999998899999999999976 356777
Q ss_pred Eeccccccccc-cChHHHHHHHHhcCCcEEEehhhhcCCCccc-CCCCcccEEEecccccc------CCCCceEEEEecC
Q 040741 202 VMAVNNEIGVI-QPMEEIGQICKEFKIPFHTDAAQALGKIPVD-VEKWNVSLMSLSGHKIY------GPKGVGALYMRRR 273 (457)
Q Consensus 202 i~~~~~~~G~~-~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~-~~~~~~Di~~~s~~K~~------g~~G~G~l~~~~~ 273 (457)
+..+++. |.+ .|+++|+++||++|+++++|+|+..+...+. ...+++|++++++||+| |++|+|++++++.
T Consensus 646 it~pst~-G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~ 724 (954)
T PRK05367 646 ITYPSTH-GVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAH 724 (954)
T ss_pred EEcCCCC-eeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCEEEecCcccCCCCcCCCCCceEEEeeccc
Confidence 7777664 554 7899999999999999999999986644443 34678999999999963 4666889999853
Q ss_pred CCccccccccCCccccccc---cCCCChh---HHHHHHHHHHHH----HHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEe
Q 040741 274 PRIRVEPLINGGGQERGIR---SGTLPTP---LIVGFGSACEIA----KKEMDYDHKRITALHDRLLNGIKEKLDGVVVN 343 (457)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~---~~t~~~~---~~~al~~al~~~----~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 343 (457)
+.+.+.|+....... .|+.... ....+..+..++ .+++.+..++...+++|+.+.|.+ ...+...
T Consensus 725 ----l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~-~~~~~~~ 799 (954)
T PRK05367 725 ----LAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKD-HYPVLYT 799 (954)
T ss_pred ----ccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh-hcCcccc
Confidence 344444432111000 1222211 112222233332 235777777777999999999988 4333333
Q ss_pred CCCCCcccceEEEEEc------cccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCC
Q 040741 344 GSMERRYIGNLNLSFA------YVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTT 415 (457)
Q Consensus 344 ~~~~~~~~~~~~~~~~------~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t 415 (457)
++. .....-..+.+. +++..++...| .|+....-+ +. ..+.++|++...++
T Consensus 800 ~~~-~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t~~---------------~p-----v~~~l~i~ptE~~s 858 (954)
T PRK05367 800 GAN-GRVAHECILDLRPLKESTGITVDDIAKRLIDYGFHAPTMS---------------FP-----VAGTLMVEPTESES 858 (954)
T ss_pred CCC-CCcccceEEEeecccccCCCCHHHHHHHHHHCCCeEeecC---------------Cc-----cCCEEEEEeeecCC
Confidence 322 122222334442 23446777777 455443211 00 13789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 040741 416 EAEVDRAIELTVKQVEKLRE 435 (457)
Q Consensus 416 ~edid~~~~~l~~~~~~~~~ 435 (457)
++|+|+++++|+...+++.+
T Consensus 859 ~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 859 KAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988765
No 224
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.92 E-value=7.9e-23 Score=204.16 Aligned_cols=311 Identities=14% Similarity=0.148 Sum_probs=208.6
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHH-HHHhcCcEE
Q 040741 95 FGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCR-HLQQEGFEI 173 (457)
Q Consensus 95 ~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~G~~v 173 (457)
|++...+...++++.++++.|.+. +++++||++|+..++.++. ++|++|+++.+.|++...... .+...|+++
T Consensus 51 ysr~~~p~~~~le~~lA~l~g~~~--~v~~~sG~~Ai~~al~~l~----~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v 124 (418)
T TIGR01326 51 YSRLMNPTTDVLEQRIAALEGGVA--ALAVASGQAAITYAILNLA----QAGDNIVSSSYLYGGTYNLFKHTLKRLGIEV 124 (418)
T ss_pred eECCCChhHHHHHHHHHHHhCCCe--EEEEccHHHHHHHHHHHHh----CCCCEEEEECCCcHHHHHHHHHHHHHcCcEE
Confidence 344445678899999999999754 8999999999999999888 899999999998877655543 345669999
Q ss_pred EEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEE
Q 040741 174 TYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMS 253 (457)
Q Consensus 174 ~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~ 253 (457)
++++.+ |++++++++++++++|++++++||+|.+.|+++|.++|+++|+++++|++++.+.. ......++|+++
T Consensus 125 ~~v~~~-----d~~~l~~~l~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~-~~~l~~g~Divv 198 (418)
T TIGR01326 125 RFVDPD-----DPEEFEKAIDENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYL-CRPIDHGADIVV 198 (418)
T ss_pred EEECCC-----CHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhc-CCchhcCCeEEE
Confidence 999854 89999999999999999999999999999999999999999999999999986632 222345789999
Q ss_pred eccccccCCCC--ceEEEEecCCCcccccccc--C---Cccc-----------------c----ccccCCCChhHHHHHH
Q 040741 254 LSGHKIYGPKG--VGALYMRRRPRIRVEPLIN--G---GGQE-----------------R----GIRSGTLPTPLIVGFG 305 (457)
Q Consensus 254 ~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~--~---~~~~-----------------~----~~~~~t~~~~~~~al~ 305 (457)
.|++|++|+.| +|+++++++.......... + ..+. + .......++....-+
T Consensus 199 ~S~sK~l~g~G~~lGg~v~~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~~~- 277 (418)
T TIGR01326 199 HSATKYIGGHGTAIGGVIVDGGKFDWANGRFPLFTTPDPSYHGLVFTETFGNPAFIVKARVQLLRDLGAALSPFNAFLL- 277 (418)
T ss_pred ECccccccCCccceEEEEEecccccccccccccccCCCCccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHH-
Confidence 99999877655 7887776532211100000 0 0000 0 000001111111100
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCC---C------------CcccceEEEEEccc-c-chHHHh
Q 040741 306 SACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSM---E------------RRYIGNLNLSFAYV-E-GESLLM 368 (457)
Q Consensus 306 ~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~------------~~~~~~~~~~~~~~-~-~~~~~~ 368 (457)
+. -...+..++++..+++..+.+.|.+ .|++..+--| . ...++++.|.+++- + ...++.
T Consensus 278 --~~-~l~tl~~R~~~~~~~a~~la~~L~~-~~~V~~V~yP~l~~~~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~ 353 (418)
T TIGR01326 278 --LQ-GLETLSLRMERHVENALKVAEFLEA-HPKVAWVNYPGLASHPHHALAKKYLPKGFGAVLSFEIKGGREAGKKFID 353 (418)
T ss_pred --HC-CcccHHHHHHHHHHHHHHHHHHHHh-CCCccEEECCCCCCCccHHHHHHhccCCCcceEEEEecCCHHHHHHHHH
Confidence 00 0113555667777788889999988 7776433111 1 23567777777532 1 245666
Q ss_pred ccc--CeEecccCccC----CCCCCh----hHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHH
Q 040741 369 GLK--EVAVSSGSACT----SASLEP----SYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 369 ~l~--~i~~~~g~~~~----~~~~~~----~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~ 430 (457)
.|+ .++++-|...+ +..+.+ .-.....|+++ +.|||+++. ||++.+++.|++++
T Consensus 354 ~l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~----~liR~svGl----E~~~dl~~dl~~Al 417 (418)
T TIGR01326 354 ALKLASHLANVGDAKSLVIHPASTTHQQLSEEEQLKAGVTP----GLIRLSVGI----ENIDDIIADLEQAL 417 (418)
T ss_pred hCCcceeccccCCCCceeeCCCCCCcccCCHHHHHhcCCCC----CeEEEEecC----CCHHHHHHHHHHhh
Confidence 664 44444454322 222211 11234566665 899999997 78888888888876
No 225
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.92 E-value=4.5e-23 Score=204.05 Aligned_cols=309 Identities=14% Similarity=0.124 Sum_probs=212.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHH-HHhcCcEEEEEeC
Q 040741 100 EVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRH-LQQEGFEITYLPV 178 (457)
Q Consensus 100 ~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~-~~~~G~~v~~v~~ 178 (457)
.+.+..+|+.++++.|.+. ++.++||+.|+.+++.+++ ++||+||++.+.|.+....+.. +...|+++++++.
T Consensus 60 nPtv~~lE~~la~leg~~~--av~~~SG~aAi~~al~all----~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 60 NPTLAAFEQKLAELEGGVG--AVATASGQAAIMLAVLNIC----SSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred CcHHHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHhc----CCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 3678999999999999865 8999999999999999987 8999999999999988877554 3667999999965
Q ss_pred CCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEecccc
Q 040741 179 GADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHK 258 (457)
Q Consensus 179 ~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K 258 (457)
. +|+++++++|+++|++|++++++||++.+.++++|+++|+++|+++++|++.+.+.. ..+.+.++|+++.|.+|
T Consensus 134 ~----~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~~-~~pl~~GADIvv~S~TK 208 (432)
T PRK06702 134 N----LTADEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYL-CQAFEHGANIIVHSTTK 208 (432)
T ss_pred C----CCHHHHHHhCCcCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchhh-CChhhcCCCEEEEcccc
Confidence 3 689999999999999999999999999999999999999999999999999864422 22335689999999999
Q ss_pred ccCC-C-C-ceEEEEecCC----------Ccccccccc-----CCc----c--cc----ccccCCCChhHHHHHHHHHHH
Q 040741 259 IYGP-K-G-VGALYMRRRP----------RIRVEPLIN-----GGG----Q--ER----GIRSGTLPTPLIVGFGSACEI 310 (457)
Q Consensus 259 ~~g~-~-G-~G~l~~~~~~----------~~~~~~~~~-----~~~----~--~~----~~~~~t~~~~~~~al~~al~~ 310 (457)
+.|. . + .|+++..... ...-..... ..+ . .+ .....+.++....-+...+
T Consensus 209 y~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL-- 286 (432)
T PRK06702 209 YIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGL-- 286 (432)
T ss_pred ccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhcc--
Confidence 6543 2 2 3444432210 000000000 000 0 00 0011233333333222222
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCC---C------------CcccceEEEEEccc--cchHHHhccc--
Q 040741 311 AKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSM---E------------RRYIGNLNLSFAYV--EGESLLMGLK-- 371 (457)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~---~------------~~~~~~~~~~~~~~--~~~~~~~~l~-- 371 (457)
+.++.++++..+++..+.+.|++ .|.+..+..| . ...++++.|.+++- ....++..|+
T Consensus 287 --~Tl~lR~~r~~~Na~~la~~L~~-~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~ 363 (432)
T PRK06702 287 --ETLHLRMERHSENALAVAKWLAD-HERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKGGLEAAKEFIANVKLA 363 (432)
T ss_pred --CcHHHHHHHHHHHHHHHHHHHHh-CCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCccc
Confidence 24678888889999999999999 7876433222 1 13467788887631 1235556553
Q ss_pred CeEecccCccC----CCCCChh----HHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 372 EVAVSSGSACT----SASLEPS----YVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 372 ~i~~~~g~~~~----~~~~~~~----~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
.+++.-|..-+ |....++ -..+..|+.+ +.|||+++. ||+|.+++.|+++++-
T Consensus 364 ~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~----~liRlSvGl----Ed~eDLi~Dl~~Al~~ 424 (432)
T PRK06702 364 TLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTS----DLIRLSVGI----EDVSDIIADLEAALVG 424 (432)
T ss_pred eeccccCCCCcceECCCCCCcccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHhc
Confidence 45555554322 2222221 1233566654 899999996 8899999999998864
No 226
>PLN02509 cystathionine beta-lyase
Probab=99.92 E-value=3.1e-23 Score=207.08 Aligned_cols=304 Identities=16% Similarity=0.112 Sum_probs=210.3
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHH-HHHhcCcEE
Q 040741 95 FGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCR-HLQQEGFEI 173 (457)
Q Consensus 95 ~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~G~~v 173 (457)
|+....+....++++++++.|.+. +++++||+.|+.+++ .+. ++||+||++.+.|.++...+. .+...|+++
T Consensus 127 Y~r~gnpt~~aLE~~lA~leg~e~--ai~~~SG~aAi~~il-~ll----~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v 199 (464)
T PLN02509 127 YTRSGNPTRDALESLLAKLDKADR--AFCFTSGMAALSAVT-HLI----KNGEEIVAGDDVYGGSDRLLSQVVPRSGVVV 199 (464)
T ss_pred cCCCCCHHHHHHHHHHHHHhCCCE--EEEeCcHHHHHHHHH-HHh----CCCCEEEEcCCchhhHHHHHHHHHHHCCeEE
Confidence 333334678899999999998653 677788888876544 455 899999999999988765543 335569999
Q ss_pred EEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEE
Q 040741 174 TYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMS 253 (457)
Q Consensus 174 ~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~ 253 (457)
++++.. |+++++++++++|++|++++++||+|.+.|+++|.++|+++|+++++|++++.+...... ..++|+++
T Consensus 200 ~~vd~~-----d~e~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~pl-~~gaDivv 273 (464)
T PLN02509 200 KRVNTT-----NLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLSRPL-ELGADIVM 273 (464)
T ss_pred EEeCCC-----CHHHHHHhCCcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccCChh-hcCCcEEE
Confidence 888643 799999999999999999999999999999999999999999999999999877543222 35789999
Q ss_pred eccccccC-CCC--ceEEEEecCCC-ccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 040741 254 LSGHKIYG-PKG--VGALYMRRRPR-IRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRL 329 (457)
Q Consensus 254 ~s~~K~~g-~~G--~G~l~~~~~~~-~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l 329 (457)
+|++|+++ +.+ .|+++++++.. .++....... .+..++..++.+...+ +.++.++++.++++.++
T Consensus 274 ~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~-------g~~l~p~~A~l~lr~L----~tL~~R~~r~~~nA~~l 342 (464)
T PLN02509 274 HSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSE-------GSGLAPFDCWLCLRGI----KTMALRIEKQQENARKI 342 (464)
T ss_pred ecCcccccCCCccceeEEEeccHHHHHHHHHHHHhc-------CCCcCHHHHHHHHhhh----hhHHHHHHHHHHHHHHH
Confidence 99999554 444 68888765432 2222111111 1123333322222222 34677888999999999
Q ss_pred HHHHhhcCCCeE-EeCC--CC-----------CcccceEEEEEcccc-chHHHhccc--CeEecccCccC----CCCCCh
Q 040741 330 LNGIKEKLDGVV-VNGS--ME-----------RRYIGNLNLSFAYVE-GESLLMGLK--EVAVSSGSACT----SASLEP 388 (457)
Q Consensus 330 ~~~l~~~~~~~~-~~~~--~~-----------~~~~~~~~~~~~~~~-~~~~~~~l~--~i~~~~g~~~~----~~~~~~ 388 (457)
.+.|++ .|.+. ++-+ ++ ...++++.|.+.+.+ ...++..|+ .++++-|...+ +....+
T Consensus 343 a~~L~~-~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~~~~~~~~f~~~l~l~~~a~slG~~~SLi~~p~~~sh 421 (464)
T PLN02509 343 AMYLSS-HPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSH 421 (464)
T ss_pred HHHHhc-CCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeCCHHHHHHHHHcCCcceEcccCCCCCceeeCCccccc
Confidence 999998 78763 3321 11 134677777763211 235566664 55556665433 221211
Q ss_pred ----hHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 389 ----SYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 389 ----~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
.-..+..|+++ +.||++++. ||+|.+++.|+++++
T Consensus 422 ~~~~~~~~~~~Gi~~----~liRlSvGl----E~~~DLi~Dl~~Al~ 460 (464)
T PLN02509 422 ASIPAEVREARGLTE----DLVRISAGI----EDVDDLISDLDIAFR 460 (464)
T ss_pred ccCCHHHHHhcCCCC----CeEEEEecc----CCHHHHHHHHHHHHc
Confidence 12334566654 899999997 788889999988875
No 227
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.92 E-value=3.6e-23 Score=201.29 Aligned_cols=278 Identities=14% Similarity=0.107 Sum_probs=195.5
Q ss_pred HHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCC
Q 040741 102 AVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGAD 181 (457)
Q Consensus 102 ~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~ 181 (457)
...++++.+++++|.++++|++|+|+++++.+++. +. ++++ |++..+.|+.+...++.. |++++.+|.+..
T Consensus 41 ~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~-~~----~~~~-vv~~~P~y~~y~~~~~~~---G~~v~~vp~~~~ 111 (332)
T PRK06425 41 SYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLS-YI----NVGN-IIIVEPNFNEYKGYAFTH---GIRISALPFNLI 111 (332)
T ss_pred CHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH-Hh----CCCc-EEEeCCChHHHHHHHHHc---CCeEEEEeCCcc
Confidence 46789999999999999999999999999999886 44 5665 555588888888777666 999999998743
Q ss_pred CCCCHHHHHHhcCCCceEEEEeccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCCC----c-cc-CCCCcccEE
Q 040741 182 GIVNLDELRAAIRPDTGLISVMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKI----P-VD-VEKWNVSLM 252 (457)
Q Consensus 182 ~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~----~-~~-~~~~~~Di~ 252 (457)
..|.+.+++ .++++|++++++||||.+.+ +++|.++|++++++|++|+++.--.. + .. ....+.-++
T Consensus 112 -~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~ 187 (332)
T PRK06425 112 -NNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVII 187 (332)
T ss_pred -cCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEEE
Confidence 346655543 47889999999999999998 56677788999999999999873221 1 01 112234578
Q ss_pred EeccccccCCCC--ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 040741 253 SLSGHKIYGPKG--VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLL 330 (457)
Q Consensus 253 ~~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~ 330 (457)
+.|++|.+|.+| +|+++++++.++++......+ +.+......+ ... .....+++..+.+++.++++.
T Consensus 188 ~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~~~~~---------~~~~~~~~~l-~~~-~~~~~~~~~~~~~~~~r~~l~ 256 (332)
T PRK06425 188 GRSLTKILGIPSLRIGYIATDDYNMKISRKITEPW---------SVCDPAIDFI-RSI-DLDYVAKHSLDIMENERSYLI 256 (332)
T ss_pred EeecHHhcCCchhhheeeecCHHHHHHHHHcCCCC---------ccCHHHHHHH-HHh-hhHHHHHHHHHHHHHHHHHHH
Confidence 889999988666 899999877666554432111 2222221111 111 111234567888889999999
Q ss_pred HHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEE
Q 040741 331 NGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRF 408 (457)
Q Consensus 331 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi 408 (457)
+.|++ + ++.+..++. ++++.+.++ +..++...+ +||.+.+|..+.. .+.++|||
T Consensus 257 ~~L~~-~-g~~~~~~~~---g~f~~~~~~--~~~~~~~~l~~~gi~v~~~~~f~~-----------------~~~~~iRi 312 (332)
T PRK06425 257 NNLEA-M-GFRAAGDPS---ANFITFMIP--DAHDFYSYLLKNGILVRLLDDYEC-----------------LGEQYIRI 312 (332)
T ss_pred HHHHH-C-CCEECCCCC---ceEEEEEcC--CHHHHHHHHHHCCeEEEECCCCCC-----------------CCCCEEEE
Confidence 99998 5 666643222 344445544 456666655 7999998864321 11379999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHH
Q 040741 409 GIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 409 ~~~~~~t~edid~~~~~l~~~~ 430 (457)
+++. .++.++++++|++++
T Consensus 313 s~~~---~~~~~~l~~al~~~~ 331 (332)
T PRK06425 313 AIRR---RSFNIKLVNALRNFL 331 (332)
T ss_pred EeCC---HHHHHHHHHHHHHHh
Confidence 9984 899999999998764
No 228
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=5.3e-23 Score=200.15 Aligned_cols=304 Identities=17% Similarity=0.140 Sum_probs=214.6
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhC---CCCCcEEEeCChHHHH
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIG---ASPKEIIFTSGATESN 131 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g---~~~~~i~~t~g~T~a~ 131 (457)
.+.+.|+.+.+. ++|+.+++++.+.+.... .+.|. .....++++.++++++ ++++++++|+|+++++
T Consensus 19 ~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~------~~~Y~---~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i 89 (335)
T PRK14808 19 RDRTYLALNENPFPFPEDLVDEVFRRLNSDT------LRIYY---DSPDEELIEKILSYLDTDFLSKNNVSVGNGADEII 89 (335)
T ss_pred CceeEecCCCCCCCCCHHHHHHHHHHhhhhh------hhcCC---CCChHHHHHHHHHHhCCCCCCcceEEEcCCHHHHH
Confidence 466888887766 678999999988764210 00011 1236678999999998 7888999999999999
Q ss_pred HHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEecccccccc
Q 040741 132 NVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGV 211 (457)
Q Consensus 132 ~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~ 211 (457)
.+++.++ +.|++..++|+.+...++.+ |.+++.++.+.++.++... + ..+++++++++|||||.
T Consensus 90 ~~~~~~~--------d~v~v~~P~y~~~~~~~~~~---g~~~~~v~~~~~~~~~~~~----~-~~~~~i~i~nP~NPTG~ 153 (335)
T PRK14808 90 YVMMLMF--------DRSVFFPPTYSCYRIFAKAV---GAKFLEVPLTKDLRIPEVN----V-GEGDVVFIPNPNNPTGH 153 (335)
T ss_pred HHHHHHh--------CcEEECCCCHHHHHHHHHHc---CCeEEEecCCCcCCCChhH----c-cCCCEEEEeCCCCCCCC
Confidence 9988765 46999999999998888777 9999999988766554332 2 35689999999999999
Q ss_pred ccChHHHHHHHHhcCCcEEEehhhhcCC--Cccc-CCCCcccEEEeccccccCCCC--ceEEEEecCCCccccccccCCc
Q 040741 212 IQPMEEIGQICKEFKIPFHTDAAQALGK--IPVD-VEKWNVSLMSLSGHKIYGPKG--VGALYMRRRPRIRVEPLINGGG 286 (457)
Q Consensus 212 ~~~l~~i~~l~~~~~v~li~D~a~~~g~--~~~~-~~~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~ 286 (457)
+.+.+++.+++ +++++|++|+++.--. .... ......-+++.|++|.+|.+| +|+++++++.++++......
T Consensus 154 ~~s~~~l~~l~-~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~~~-- 230 (335)
T PRK14808 154 VFEREEIERIL-KTGAFVALDEAYYEFHGESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVRLP-- 230 (335)
T ss_pred CcCHHHHHHHH-hcCCEEEEECchhhhcCCchHHHHHhCCCEEEEEechhhccCcccceEEEEeCHHHHHHHHHhcCC--
Confidence 99999999998 5799999999986321 1111 112233578889999888665 89999987766655433311
Q ss_pred cccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHH
Q 040741 287 QERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESL 366 (457)
Q Consensus 287 ~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (457)
...+.....++..+++. .+.+.+..+...+.++++.+.|++ . ++.+..+ + ++++.+.++..+...+
T Consensus 231 -------~~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~-~-g~~~~~~-~---g~f~~~~l~~~~~~~~ 296 (335)
T PRK14808 231 -------FNVSYVSQMFAKVALDH-REIFEERTKFIVEERERMKSALRE-M-GYRITDS-R---GNFVFIFMEKEEKERL 296 (335)
T ss_pred -------CCCCHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHHH-C-CCEECCC-C---CeEEEEeCCCccHHHH
Confidence 12334444444455542 223455566777778888899988 4 6665543 2 4555555554444566
Q ss_pred Hhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHH
Q 040741 367 LMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVK 428 (457)
Q Consensus 367 ~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~ 428 (457)
...+ +||.++. | .+++||+++. .++.++++++|++
T Consensus 297 ~~~l~~~Gi~V~~---~---------------------~~~~Risi~~---~~~~~~~~~~l~~ 333 (335)
T PRK14808 297 LEHLRAKNIAVRS---F---------------------REGVRITIGK---REENDMILKELEV 333 (335)
T ss_pred HHHHHHCCeEEEE---C---------------------CCCeEEecCC---HHHHHHHHHHHHh
Confidence 6665 6888862 1 1579999985 7899999998875
No 229
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.92 E-value=2.3e-23 Score=204.95 Aligned_cols=332 Identities=20% Similarity=0.200 Sum_probs=220.5
Q ss_pred CHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEE
Q 040741 70 DPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHV 149 (457)
Q Consensus 70 ~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~v 149 (457)
.++.++++.+.+.+.+-... .+.+.++|+.+++++|.+. ++.++|||.|+.+++.++.. ++|++|
T Consensus 4 ~~e~~~~v~~~l~s~~~~~~----------g~~~~~fE~~~a~~~g~~~--~~~~~sgt~Al~~al~~l~~---~~gdeV 68 (363)
T PF01041_consen 4 TEEEIDAVLEVLRSGWLSTY----------GPYVEEFEKEFAEYFGVKY--AVAVSSGTSALHLALRALGL---GPGDEV 68 (363)
T ss_dssp HHHHHHHHHHHHHHTCCSSS----------SHHHHHHHHHHHHHHTSSE--EEEESSHHHHHHHHHHHTTG---GTTSEE
T ss_pred CHHHHHHHHHHHHhCCccCC----------CHHHHHHHHHHHHHhCCCe--EEEeCChhHHHHHHHHhcCC---CcCceE
Confidence 46778888888876432110 1689999999999999754 99999999999999999876 799999
Q ss_pred EEcCCCCcchHHHHHHHHhcCcEEEEEeCC-CCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCc
Q 040741 150 ITTQTEHKCVLDSCRHLQQEGFEITYLPVG-ADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIP 228 (457)
Q Consensus 150 i~~~~~h~~~~~~~~~~~~~G~~v~~v~~~-~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~ 228 (457)
|++..++.++..++..+ |+++++++++ .++.+|+++++++|+++|+.|++.|. .|...++++|.++|+++|++
T Consensus 69 i~p~~t~~~~~~ai~~~---G~~pv~~Di~~~~~~id~~~~~~~i~~~t~ai~~~h~---~G~~~d~~~i~~~~~~~~i~ 142 (363)
T PF01041_consen 69 IVPAYTFPATASAILWA---GAEPVFVDIDPETLNIDPEALEKAITPKTKAILVVHL---FGNPADMDAIRAIARKHGIP 142 (363)
T ss_dssp EEESSS-THHHHHHHHT---T-EEEEE-BETTTSSB-HHHHHHHHHTTEEEEEEE-G---GGB---HHHHHHHHHHTT-E
T ss_pred ecCCCcchHHHHHHHHh---ccEEEEEeccCCcCCcCHHHHHHHhccCccEEEEecC---CCCcccHHHHHHHHHHcCCc
Confidence 99999999999999888 9999999999 77899999999999999999999887 79999999999999999999
Q ss_pred EEEehhhhcCCCccc--CCCCcccEEEeccc--cccCCCCceEEEEecCCC-ccccccccCCcc---ccccccCC-CChh
Q 040741 229 FHTDAAQALGKIPVD--VEKWNVSLMSLSGH--KIYGPKGVGALYMRRRPR-IRVEPLINGGGQ---ERGIRSGT-LPTP 299 (457)
Q Consensus 229 li~D~a~~~g~~~~~--~~~~~~Di~~~s~~--K~~g~~G~G~l~~~~~~~-~~~~~~~~~~~~---~~~~~~~t-~~~~ 299 (457)
||.|+||++|+..-+ +... -|+.++||+ |.+.....|+++++++.. ++++.+...+.. ...+.... +...
T Consensus 143 lIeD~a~a~g~~~~g~~~G~~-gd~~~fSf~~~K~i~~geGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n 221 (363)
T PF01041_consen 143 LIEDAAQAFGARYKGRPVGSF-GDIAIFSFHPTKIITTGEGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYN 221 (363)
T ss_dssp EEEE-TTTTT-EETTEETTSS-SSEEEEESSTTSSS-SSS-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B
T ss_pred EEEccccccCceeCCEeccCC-CCceEecCCCCCCCcCCCCeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcc
Confidence 999999999875432 2222 377777775 765433359999887532 333333222211 01111111 0000
Q ss_pred -HHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCc---ccceEEEEEccc---cchHHHhcc-
Q 040741 300 -LIVGFGSACEIAK-KEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERR---YIGNLNLSFAYV---EGESLLMGL- 370 (457)
Q Consensus 300 -~~~al~~al~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~l- 370 (457)
-+..+.+|+-..+ +.+++..++.+++++++.+.|.+ ++++.....+... ....+.+.++.. +.+.+...|
T Consensus 222 ~rm~~~~AAigl~QL~~L~~~~~~R~~~a~~y~~~L~~-~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~~~L~ 300 (363)
T PF01041_consen 222 FRMSELQAAIGLAQLKRLDEIIARRRENAQRYREALAG-IPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELVEALR 300 (363)
T ss_dssp -B-BHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTT-GTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCCcccccccccccccccccccccccccccchHHHHHHHHH
Confidence 1111222332222 35788888999999999999999 8988665543322 233344555532 456777777
Q ss_pred -cCeEecccCccCCCCCChhHHHHH--------cCCCccCCCCeEEEecCCCCCHHHHHHHHHHHH
Q 040741 371 -KEVAVSSGSACTSASLEPSYVLRA--------LGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTV 427 (457)
Q Consensus 371 -~~i~~~~g~~~~~~~~~~~~~l~~--------~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~ 427 (457)
+||.+..... .+....|. .+. +...+....+.|.+.+....+.+|+++++++|+
T Consensus 301 ~~GI~~~~~~~-~pl~~~~~--~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 301 ARGIETRPHYP-KPLHRQPV--YRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp HTTBEEBCSTS-SCGGGSGG--GTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred HCCCccccccc-CchhhhHH--HHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 6887776541 11111111 111 111112345799999999999999999999875
No 230
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.92 E-value=2.6e-22 Score=200.06 Aligned_cols=324 Identities=19% Similarity=0.216 Sum_probs=213.7
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChH
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGAT 128 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T 128 (457)
..+.-|+|+.+. +...|++.+++.+.+....-. .+ . -..+...+++++++++.+. +.++|+++||
T Consensus 37 ~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~-~~--~----~~~~~~~~l~~~l~~~~~~--~~~~~~~SGs 107 (396)
T PRK04073 37 PEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLT-SR--A----FHSDQLGPWYEKVAKLTGK--DMVLPMNTGA 107 (396)
T ss_pred CCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhcccc-cc--c----cCCHHHHHHHHHHHhcCCC--CeEEEcCChH
Confidence 345568887433 247899999999998753211 10 0 1125667889999998875 3599999999
Q ss_pred HHHHHHHHHhhhhhc------CCCCEEEEc-CCCCcchHHHHHHHHhcCc---------EEEEEeCCCCCCCCHHHHHHh
Q 040741 129 ESNNVSIKGVMHFYK------DKKRHVITT-QTEHKCVLDSCRHLQQEGF---------EITYLPVGADGIVNLDELRAA 192 (457)
Q Consensus 129 ~a~~~al~~~~~~~~------~~g~~vi~~-~~~h~~~~~~~~~~~~~G~---------~v~~v~~~~~~~~d~~~le~~ 192 (457)
+|++.+++....+.. ..+++|++. ...|.....+.......+. .+..++.+ |+++++++
T Consensus 108 eA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~ 182 (396)
T PRK04073 108 EAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYG-----DLEALKAA 182 (396)
T ss_pred HHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCC-----CHHHHHHh
Confidence 999999998765421 123455554 5567777666544321111 12223322 88999999
Q ss_pred cCCCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCC----cccCCCCcccEEEeccccccCCC
Q 040741 193 IRPDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKI----PVDVEKWNVSLMSLSGHKIYGPK 263 (457)
Q Consensus 193 i~~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~----~~~~~~~~~Di~~~s~~K~~g~~ 263 (457)
+++++++|++++++|++|.+.| +++|.++|++||+++|+|++|+ +|.. ..+.....+|++++ +|.+|..
T Consensus 183 i~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~~--sK~lg~g 260 (396)
T PRK04073 183 ITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPDMYIL--GKALGGG 260 (396)
T ss_pred cccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCCEEEe--cccccCC
Confidence 9989999999999999999987 8899999999999999999997 3321 11222335787765 5966543
Q ss_pred --CceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeE
Q 040741 264 --GVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVV 341 (457)
Q Consensus 264 --G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 341 (457)
.+|+++++++..+.+.....+ ... ..++..+++..++++.+.+ +...++.+++.+++.+.|++ +.. .
T Consensus 261 g~~ig~~~~~~~i~~~~~~~~~~------~t~-~~~~~~~aaa~aaL~~~~~--~~l~~~~~~~~~~l~~~L~~-l~~-~ 329 (396)
T PRK04073 261 VFPISCVAANRDILGVFTPGSHG------STF-GGNPLACAVSIAALEVLEE--EKLPERSLELGEYFKEQLKE-IDN-P 329 (396)
T ss_pred CCcceEEEEcHHHHhhhcCCCCC------CCC-CCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHh-hcC-C
Confidence 389999988766555432111 111 3455666666678877654 34557777888999998887 421 1
Q ss_pred EeCCCCCcccceEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHH
Q 040741 342 VNGSMERRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEV 419 (457)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edi 419 (457)
.+.+. ...+.++.+.+. .+...+...| +||.+.+. ..++|||+++..+++||+
T Consensus 330 ~i~~~-~~~g~~~~~~~~-~~~~~~~~~l~~~Gv~~~~~-----------------------~~~~iRi~p~l~~t~e~i 384 (396)
T PRK04073 330 MIKEV-RGRGLFIGVELN-EPARPYCEALKEEGLLCKET-----------------------HETVIRFAPPLVITKEEL 384 (396)
T ss_pred cccce-ecceEEEEEEec-chHHHHHHHHHHCCeEEecC-----------------------CCCEEEEECCcccCHHHH
Confidence 11111 112344444443 2344555555 57766421 126899999999999999
Q ss_pred HHHHHHHHHHH
Q 040741 420 DRAIELTVKQV 430 (457)
Q Consensus 420 d~~~~~l~~~~ 430 (457)
|+++++|++++
T Consensus 385 ~~~~~~l~~~l 395 (396)
T PRK04073 385 DWAFEKIKAVL 395 (396)
T ss_pred HHHHHHHHHHh
Confidence 99999998875
No 231
>PRK07505 hypothetical protein; Provisional
Probab=99.92 E-value=4.1e-22 Score=199.10 Aligned_cols=336 Identities=12% Similarity=0.116 Sum_probs=212.0
Q ss_pred CCCcEEecCCCCCCC----CHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHH
Q 040741 55 AGRPLYLDMQATTPV----DPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATES 130 (457)
Q Consensus 55 ~~~~i~l~~~~~~~~----~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a 130 (457)
..+.-|+|+.+...+ +|++.+++.+++.. +++.++.... +....+...++++.|+++++. +.++.++|++|
T Consensus 43 ~~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~-~g~~~~~~~~-~~~~~~~~~~l~~~la~~~~~---~~~~~~sG~~a 117 (402)
T PRK07505 43 ADGHTFVNFVSCSYLGLDTHPAIIEGAVDALKR-TGSLHLSSSR-TRVRSQILKDLEEALSELFGA---SVLTFTSCSAA 117 (402)
T ss_pred cCCceEEEeecCCccCCCCCHHHHHHHHHHHHH-hCCCCCCccc-hhhhhHHHHHHHHHHHHHhCC---CEEEECChHHH
Confidence 345568888776654 89999999999975 3321111111 112346889999999999997 36666677889
Q ss_pred HHHHHHHhhhh-hc-CCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccc
Q 040741 131 NNVSIKGVMHF-YK-DKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNE 208 (457)
Q Consensus 131 ~~~al~~~~~~-~~-~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~ 208 (457)
+..+++.+... +. ++++.|+....+|++......... .+.+++.++.+ |++++++++++++++++++.++|+
T Consensus 118 ~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~-~~~~v~~~~~~-----d~~~l~~~~~~~~~~~vl~~p~~~ 191 (402)
T PRK07505 118 HLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICA-DETEVETIDHN-----DLDALEDICKTNKTVAYVADGVYS 191 (402)
T ss_pred HHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhh-cCCeEEEeCCC-----CHHHHHHHHhcCCCEEEEEecccc
Confidence 98888764421 11 234456666788887654333222 35677777764 899999999888888888899999
Q ss_pred cccccChHHHHHHHHhcCCcEEEehhhhcCCC-----ccc---CC--CCcccEEEeccccccCCCCceEEEE-ecCCCcc
Q 040741 209 IGVIQPMEEIGQICKEFKIPFHTDAAQALGKI-----PVD---VE--KWNVSLMSLSGHKIYGPKGVGALYM-RRRPRIR 277 (457)
Q Consensus 209 ~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~-----~~~---~~--~~~~Di~~~s~~K~~g~~G~G~l~~-~~~~~~~ 277 (457)
+|.+.|+++|.++|++||+++|+|++|+.+.. ... .. ..+..+++.|++|.+|..| |++++ +++..+.
T Consensus 192 ~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G-g~~~~~~~~~~~~ 270 (402)
T PRK07505 192 MGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG-GVIMLGDAEQIEL 270 (402)
T ss_pred cCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC-eEEEeCCHHHHHH
Confidence 99999999999999999999999999864211 111 11 1234577789999888665 77765 4344344
Q ss_pred ccccccCCccccccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEE
Q 040741 278 VEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNL 356 (457)
Q Consensus 278 ~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 356 (457)
+......+ ...+++++..++++.++++...+ .+.+..++++++.+.+...+.. + + ... ...+..+
T Consensus 271 ~~~~~~~~-----t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~---~---~g~-~~~i~~~ 336 (402)
T PRK07505 271 ILRYAGPL-----AFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPT--E---Q---SGS-FLPIRLI 336 (402)
T ss_pred HHHhCCCc-----eeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHh--c---C---CCC-CCCEEEE
Confidence 43322111 12345666777777777775543 3555555555555444333222 1 0 111 1111122
Q ss_pred EEccc-cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 357 SFAYV-EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 357 ~~~~~-~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
.+... ....+...| +||.+.+...... ....++|||+++..+++||+++++++|++++++
T Consensus 337 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~----------------~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 337 YIGDEDTAIKAAKQLLDRGFYTSPVFFPVV----------------AKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred EeCCHHHHHHHHHHHHHCCCeEeeecCCCC----------------CCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 22211 234555555 6888875421100 012268999999999999999999999988754
No 232
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.92 E-value=7.9e-23 Score=201.05 Aligned_cols=308 Identities=16% Similarity=0.112 Sum_probs=201.8
Q ss_pred cEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh-------CCCCCcEEEeCChHH
Q 040741 58 PLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI-------GASPKEIIFTSGATE 129 (457)
Q Consensus 58 ~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~-------g~~~~~i~~t~g~T~ 129 (457)
.+.|..+.+. ++++.+.+++.+... ...++.. ....++++.+++++ |++++++++|+|+++
T Consensus 23 ~i~l~~~~p~~~~~~~~~~~~~~~~~-~~~Y~~~----------~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~ 91 (357)
T TIGR03539 23 IVDLSVGTPVDPVPPLIRAALAAAAD-APGYPQT----------WGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKE 91 (357)
T ss_pred eEEccCCCCCCCCCHHHHHHHHHHHh-hCCCCcc----------cCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHH
Confidence 3455544333 557778888776543 1111111 12334455555554 466889999999999
Q ss_pred HHHHHHHHh-hhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccc
Q 040741 130 SNNVSIKGV-MHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNE 208 (457)
Q Consensus 130 a~~~al~~~-~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~ 208 (457)
++.+++..+ . ++||.|+++.+.|+++...++.. |++++.++ |++.++ .+++++|++++++||
T Consensus 92 ~i~~~~~~l~~----~~gd~Vl~~~p~y~~~~~~~~~~---g~~~~~v~-------~~~~l~---~~~~~~v~~~~p~NP 154 (357)
T TIGR03539 92 LVAWLPTLLGL----GPGDTVVIPELAYPTYEVGALLA---GATPVAAD-------DPTELD---PVGPDLIWLNSPGNP 154 (357)
T ss_pred HHHHHHHHHcC----CCCCEEEECCCCcHHHHHHHHhc---CCEEeccC-------ChhhcC---ccCccEEEEeCCCCC
Confidence 999988877 5 89999999999999888776655 88887764 333332 357899999999999
Q ss_pred cccccC---hHHHHHHHHhcCCcEEEehhhhcCC---Cccc-CC------CCcccEEEeccccccCCCC--ceEEEEecC
Q 040741 209 IGVIQP---MEEIGQICKEFKIPFHTDAAQALGK---IPVD-VE------KWNVSLMSLSGHKIYGPKG--VGALYMRRR 273 (457)
Q Consensus 209 ~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~---~~~~-~~------~~~~Di~~~s~~K~~g~~G--~G~l~~~~~ 273 (457)
||.+.+ +++|.++|+++|+++|+|+++..-. .+.. +. .....+++.|++|.+|.+| +|+++++++
T Consensus 155 tG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~~ 234 (357)
T TIGR03539 155 TGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDPA 234 (357)
T ss_pred cCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecCHH
Confidence 999998 6678899999999999999986311 1111 10 1123488889999887666 799998776
Q ss_pred CCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccce
Q 040741 274 PRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGN 353 (457)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 353 (457)
.+.++....... ...++.....++..+++. ...+.+..++++++++.+.+.|++ . ++.+..+ .. +.+
T Consensus 235 ~~~~~~~~~~~~-------~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~L~~-~-g~~~~~p-~~--~~~ 301 (357)
T TIGR03539 235 LVAELLTVRKHA-------GLMVPAPVQAAMVAALGD-DGHVAEQKARYAARRAQLKPALEK-A-GFRIDHS-EA--GLY 301 (357)
T ss_pred HHHHHHHHHhhc-------ccCCCHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHHHHHHHH-c-CCCCcCC-Cc--cEE
Confidence 655554332211 123454555555455532 234667778888888999999988 4 5554432 11 222
Q ss_pred EEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHH
Q 040741 354 LNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELT 426 (457)
Q Consensus 354 ~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l 426 (457)
+.+..+ .+..++...| +||.+.+|..+.. ..+++|||+++. +.+++++++++|
T Consensus 302 ~~~~~~-~~~~~~~~~l~~~gV~v~pg~~f~~-----------------~~~~~iRis~~~--~~~~i~~~~~~l 356 (357)
T TIGR03539 302 LWATRG-EDAWDTVDRLAELGILVAPGDFYGP-----------------AGSQHVRVALTA--TDERIAAAVARL 356 (357)
T ss_pred EEEECC-CCHHHHHHHHHhCCEEECCccccCC-----------------CCCCeEEEEecC--CHHHHHHHHHhh
Confidence 222222 2344565555 6899988764321 123799999986 578999888775
No 233
>PLN02672 methionine S-methyltransferase
Probab=99.92 E-value=3.3e-22 Score=213.37 Aligned_cols=326 Identities=12% Similarity=0.098 Sum_probs=227.0
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCC---cEEEeCChHHHH
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPK---EIIFTSGATESN 131 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~---~i~~t~g~T~a~ 131 (457)
.+.|.|+.+.+. ++|+.+.+++.+.+... + +..++ .+....+.+++++..|.+.+ ++++++|+++++
T Consensus 697 ~~vI~LsinE~d~ppPp~V~eAi~eal~~~--~-----~s~g~--pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL 767 (1082)
T PLN02672 697 SSLIHMDVDESFLPVPSAVKASIFESFVRQ--N-----ISESE--TDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALF 767 (1082)
T ss_pred CCEEEEeCCCCCCCCCHHHHHHHHHHHhhc--C-----CCCCC--hHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHH
Confidence 466899988777 78899999998876431 1 11111 23567888999999888654 799999999999
Q ss_pred HHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC--CCCCCHHHHHHhcCC-CceEEEEeccc-c
Q 040741 132 NVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA--DGIVNLDELRAAIRP-DTGLISVMAVN-N 207 (457)
Q Consensus 132 ~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~le~~i~~-~t~li~i~~~~-~ 207 (457)
.+++.++. ++||.|+++.+.|+.+...++.. |.+++.++.+. +..+|++++++++++ .+++|++++++ |
T Consensus 768 ~lll~aLl----~pGD~VLVp~PtY~~Y~~~a~~~---Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhN 840 (1082)
T PLN02672 768 NKLVLCCV----QEGGTLCFPAGSNGTYVSAAKFL---KANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTIN 840 (1082)
T ss_pred HHHHHHHc----CCCCEEEEeCCChHHHHHHHHHc---CCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCC
Confidence 99999998 89999999999999999888776 99999999863 457889999999976 35678888886 9
Q ss_pred ccccccC---hHHHHHHHHhcCCcEEEehhhhc----CCC--cccCC----CC------cccEEEeccccccCCCC--ce
Q 040741 208 EIGVIQP---MEEIGQICKEFKIPFHTDAAQAL----GKI--PVDVE----KW------NVSLMSLSGHKIYGPKG--VG 266 (457)
Q Consensus 208 ~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~----g~~--~~~~~----~~------~~Di~~~s~~K~~g~~G--~G 266 (457)
|||.+++ +++|+++|++||++||+|++|+- +.. ..++. .. ..-+++.|++|.|+.+| +|
T Consensus 841 PTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIG 920 (1082)
T PLN02672 841 PTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFG 920 (1082)
T ss_pred CcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHhe
Confidence 9999988 67788899999999999999962 111 00010 00 12356779999777666 99
Q ss_pred EEEEecC-CCccccccccCCccccccccCCCChhHHHHHHHHHHHH-------HHhhHHHHHHHHHHHHHHHHHHhhcCC
Q 040741 267 ALYMRRR-PRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIA-------KKEMDYDHKRITALHDRLLNGIKEKLD 338 (457)
Q Consensus 267 ~l~~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~-------~~~~~~~~~~~~~~~~~l~~~l~~~~~ 338 (457)
|++++++ .++++...... ..+......++.+++... .+.+.+.++.++++++++.+.|++ .
T Consensus 921 ylIap~~eLi~~l~~~~~~---------s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~-~- 989 (1082)
T PLN02672 921 FLALNDSVLIDAFHSAPGL---------SRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEA-C- 989 (1082)
T ss_pred eEEeCCHHHHHHHHHhhhh---------cCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHH-C-
Confidence 9998654 45555432110 011112222222233211 234567777889999999999998 4
Q ss_pred CeEEeCCCCCcccceEEEEEc------------------cccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCC
Q 040741 339 GVVVNGSMERRYIGNLNLSFA------------------YVEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGV 397 (457)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~ 397 (457)
++.+..+. . ..++.+.++ +.+..++...| .||.+.+|..+. .
T Consensus 990 Gi~v~~Pe-G--GFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG--------------~ 1052 (1082)
T PLN02672 990 GWDVLEPQ-G--GISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTG--------------I 1052 (1082)
T ss_pred CCeEecCC-c--EEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccC--------------C
Confidence 66665432 1 111111111 12345566655 389999986431 1
Q ss_pred CccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 398 DEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 398 ~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
.+++||+++. +++++++++++|+++.+.
T Consensus 1053 -----~g~~RIsfa~--~~e~LeeALerL~kf~~~ 1080 (1082)
T PLN02672 1053 -----PGYCRFSFAL--EDSEFDRALKAIARFKEL 1080 (1082)
T ss_pred -----CCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 2799999985 788999999999986653
No 234
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.92 E-value=3.2e-22 Score=199.99 Aligned_cols=324 Identities=17% Similarity=0.182 Sum_probs=213.4
Q ss_pred CcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHH
Q 040741 57 RPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATES 130 (457)
Q Consensus 57 ~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a 130 (457)
+.-|+|+.+. +...|++.+++.+.+.... ...+ .-..+...+++++++++++.+ .++|++|||+|
T Consensus 40 g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~-~~~~------~~~~~~~~~l~~~l~~~~~~~--~~~~~~SGs~A 110 (401)
T PRK00854 40 GNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLT-LTSR------AFRNDQLAPLYEELAALTGSH--KVLPMNSGAEA 110 (401)
T ss_pred CCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhcc-cccc------ccCCHHHHHHHHHHHhhCCCC--EEEEeCCcHHH
Confidence 3346775332 2348999999999987631 1110 011257888999999999864 59999999999
Q ss_pred HHHHHHHhhhhh----c--CCCCEEEE-cCCCCcchHHHHHHHH---------hcCcEEEEEeCCCCCCCCHHHHHHhcC
Q 040741 131 NNVSIKGVMHFY----K--DKKRHVIT-TQTEHKCVLDSCRHLQ---------QEGFEITYLPVGADGIVNLDELRAAIR 194 (457)
Q Consensus 131 ~~~al~~~~~~~----~--~~g~~vi~-~~~~h~~~~~~~~~~~---------~~G~~v~~v~~~~~~~~d~~~le~~i~ 194 (457)
++.+++.+..+. + ..+++||+ ....|.+...+..... .....+..++. .|++++++++.
T Consensus 111 ~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~i~ 185 (401)
T PRK00854 111 VETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF-----GDAEALEAAIT 185 (401)
T ss_pred HHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC-----CCHHHHHHHhC
Confidence 999999886431 0 12245555 4455665544332110 00122333432 38999999999
Q ss_pred CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc--c--cCCCCcccEEEeccccccCCC--
Q 040741 195 PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP--V--DVEKWNVSLMSLSGHKIYGPK-- 263 (457)
Q Consensus 195 ~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~--~--~~~~~~~Di~~~s~~K~~g~~-- 263 (457)
+++++|++++++|++|.+.| +++|.++|++||+++|+|++|+ +|... + ......+|+++++ |.++..
T Consensus 186 ~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~~~--K~l~gg~~ 263 (401)
T PRK00854 186 PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTLIG--KALSGGFY 263 (401)
T ss_pred CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEEEec--ccccCCcc
Confidence 99999999999999999997 9999999999999999999998 55432 1 1122346888775 954322
Q ss_pred CceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEe
Q 040741 264 GVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVN 343 (457)
Q Consensus 264 G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 343 (457)
.+|+++++++..+.+.....+ ... ..++..+++..++++.+.+ ....++.+++.+++.+.|++ +.. ...
T Consensus 264 ~ig~v~~~~~~~~~l~~~~~~------~t~-~~~~~~~aa~~a~L~~l~~--~~~~~~~~~~~~~l~~~L~~-~~~-~~~ 332 (401)
T PRK00854 264 PVSAVLSNSEVLGVLKPGQHG------STF-GGNPLACAVARAALKVLTE--EGMIENAAEMGAYFLEGLRS-IRS-NIV 332 (401)
T ss_pred CeEEEEEcHHHHhcccCCCCC------CCC-CcCHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHHHHHh-hcc-Cce
Confidence 379999988766655432211 111 2466667777778877654 34678888899999999987 432 111
Q ss_pred CCCCCcccceEEEEEcc--ccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHH
Q 040741 344 GSMERRYIGNLNLSFAY--VEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEV 419 (457)
Q Consensus 344 ~~~~~~~~~~~~~~~~~--~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edi 419 (457)
... ...+.++.+.+.. .+..++...| +||.+... ..++|||+++..++++||
T Consensus 333 ~~~-~g~g~~~~i~~~~~~~~~~~~~~~L~~~GV~v~~~-----------------------~~~~lR~~p~~~~t~e~i 388 (401)
T PRK00854 333 REV-RGRGLMLAVELEPEAGGARQYCEALKERGLLAKDT-----------------------HDHTIRLAPPLVITREQV 388 (401)
T ss_pred EEE-eccceEEEEEEecCchhHHHHHHHHHHCCeEEecC-----------------------CCCEEEEeCCcccCHHHH
Confidence 111 1123444444422 1234565555 57766421 126999999999999999
Q ss_pred HHHHHHHHHHHH
Q 040741 420 DRAIELTVKQVE 431 (457)
Q Consensus 420 d~~~~~l~~~~~ 431 (457)
|+++++|++++.
T Consensus 389 ~~~i~~l~~~l~ 400 (401)
T PRK00854 389 DWALEQIAKVLA 400 (401)
T ss_pred HHHHHHHHHHhh
Confidence 999999998764
No 235
>PRK04311 selenocysteine synthase; Provisional
Probab=99.92 E-value=4.4e-22 Score=198.77 Aligned_cols=339 Identities=15% Similarity=0.150 Sum_probs=225.8
Q ss_pred ceecccccCCCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCC
Q 040741 47 ITLKGVRIAGRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSG 126 (457)
Q Consensus 47 ~~~~~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g 126 (457)
...+.+.+..+.+|+++.+.+++++++++++.+++.+. .+... ....+. ..+.+..+++.+++++|++. ++++++
T Consensus 76 ~~lr~vinatg~v~~tNlg~s~l~~~v~eav~~~~~~~-~~le~-~l~~g~-~g~r~~~~e~~lA~l~Gae~--a~vv~s 150 (464)
T PRK04311 76 PSLRPVINATGVVLHTNLGRALLSEAAIEAVTEAARGY-SNLEY-DLATGK-RGSRDRALAALLCALTGAED--ALVVNN 150 (464)
T ss_pred CCCcceecCCccEEeccCCCCCCCHHHHHHHHHHHhcc-ccccc-chhhcc-cchHHHHHHHHHHHHhCCCe--EEEECC
Confidence 34477788888899999999999999999999998653 22111 011111 12457789999999999874 888899
Q ss_pred hHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHH---HHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEe
Q 040741 127 ATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLD---SCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVM 203 (457)
Q Consensus 127 ~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~---~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~ 203 (457)
++.|+.+++.++ .+|++||+++.+|..... ....+...|+++++++.+ +..++++++++|+++|++|+++
T Consensus 151 gtaAl~l~l~~l-----~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~--~~t~~~dle~aI~~~TklV~~v 223 (464)
T PRK04311 151 NAAAVLLALNAL-----AAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTT--NRTHLRDYEQAINENTALLLKV 223 (464)
T ss_pred HHHHHHHHHHHh-----CCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCC--CCCCHHHHHHhcCccCeEEEEE
Confidence 999999888653 589999999887763321 122345669999998764 3357999999999999999999
Q ss_pred ccccc--cc--cccChHHHHHHHHhcCCcEEEehhhhc---------CCCcc--cCCCCcccEEEeccccccCCCCceEE
Q 040741 204 AVNNE--IG--VIQPMEEIGQICKEFKIPFHTDAAQAL---------GKIPV--DVEKWNVSLMSLSGHKIYGPKGVGAL 268 (457)
Q Consensus 204 ~~~~~--~G--~~~~l~~i~~l~~~~~v~li~D~a~~~---------g~~~~--~~~~~~~Di~~~s~~K~~g~~G~G~l 268 (457)
+++|+ +| ...|+++|+++||+||+++++|.+++. +..+. +..+.++|++++|++|++|++..|++
T Consensus 224 h~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~~G~i 303 (464)
T PRK04311 224 HTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGII 303 (464)
T ss_pred cCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCceEEE
Confidence 99997 34 568999999999999999999996432 12221 12236899999999996654457999
Q ss_pred EEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHH------------hhHHHHHHHHHHHHHHHHHHhhc
Q 040741 269 YMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKK------------EMDYDHKRITALHDRLLNGIKEK 336 (457)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~------------~~~~~~~~~~~~~~~l~~~l~~~ 336 (457)
+++++.+++++....+ +.+ ...-..+.++.+++..... .+....++..++++.+.+.|+.
T Consensus 304 ~g~~~li~~l~~~~~~----r~l---r~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~- 375 (464)
T PRK04311 304 VGKKELIARLKKHPLK----RAL---RVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKA- 375 (464)
T ss_pred EEcHHHHHHHhhchhH----HHH---hcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHh-
Confidence 9998776655421111 111 2233345555555543321 1344456777788888888877
Q ss_pred CC--C--eEEeCC---------CCCcccceEEEEEc--cccchHHHhcccC----eEecccCccCCCCCChhHHHHHcCC
Q 040741 337 LD--G--VVVNGS---------MERRYIGNLNLSFA--YVEGESLLMGLKE----VAVSSGSACTSASLEPSYVLRALGV 397 (457)
Q Consensus 337 ~~--~--~~~~~~---------~~~~~~~~~~~~~~--~~~~~~~~~~l~~----i~~~~g~~~~~~~~~~~~~l~~~g~ 397 (457)
.+ + +.+... +.... +...+.+. ..+..++...|+. |..+
T Consensus 376 ~~~~~~~~~~~~~~~~~gggs~p~~~~-~~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r--------------------- 433 (464)
T PRK04311 376 ALGAAFAVEVVPSFSQVGGGSLPVDRL-PSAAVTLTPKDRSLEALAARLRLLPPPVIGR--------------------- 433 (464)
T ss_pred ccCCCeeEEEEEccCccCCCCCcCCCC-CeEEEEEeCCCCCHHHHHHHHhcCCCCEEEE---------------------
Confidence 43 2 344422 11111 22233343 3455677777642 3222
Q ss_pred CccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 398 DEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 398 ~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
..++.+.+-+-. ..++|++.+++++++.+.
T Consensus 434 ---~~~~~~~ld~r~-~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 434 ---IEDGRLLLDLRT-LEEEDEERLAAALLEALN 463 (464)
T ss_pred ---EECCEEEEEeCc-CCHHHHHHHHHHHHHHhh
Confidence 112566666544 457899999999988754
No 236
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.92 E-value=4.4e-23 Score=201.78 Aligned_cols=300 Identities=16% Similarity=0.123 Sum_probs=204.2
Q ss_pred chhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhc-CcE
Q 040741 94 LFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQE-GFE 172 (457)
Q Consensus 94 ~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~-G~~ 172 (457)
.|++...+...+++++++++.|.+ +++.++||++|+.+++. +. ++||+||++...|.+....+...... +..
T Consensus 47 ~Y~R~~~p~~~~le~~lA~leg~~--~~v~~~sG~aAi~~~l~-~l----~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~ 119 (364)
T PRK07269 47 DYTRTKNPTRAKLEETLAAIESAD--YALATSSGMSAIVLAFS-VF----PVGSKVVAVRDLYGGSFRWFNQQEKEGRFH 119 (364)
T ss_pred ceeCCCCccHHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHH-Hh----CCCCEEEEecCCcCchHHHHHHHHhcCcEE
Confidence 344444578889999999999865 49999999999999884 55 79999999998888776544433222 333
Q ss_pred EEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEE
Q 040741 173 ITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLM 252 (457)
Q Consensus 173 v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~ 252 (457)
+.+ ..|+++++++++++|++|++++++||+|.+.++++|+++|+++|+++++|++++.+... .....++|++
T Consensus 120 ~~~-------~~d~~~l~~~i~~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~-~pl~~gaDiv 191 (364)
T PRK07269 120 FTY-------ANTEEELIAAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQ-RPIELGADIV 191 (364)
T ss_pred EEe-------cCCHHHHHHhcCcCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC-CchhhCCcEE
Confidence 222 14899999999999999999999999999999999999999999999999998655432 2234579999
Q ss_pred EeccccccCC-CC--ceEEEEecC-CCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 040741 253 SLSGHKIYGP-KG--VGALYMRRR-PRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDR 328 (457)
Q Consensus 253 ~~s~~K~~g~-~G--~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~ 328 (457)
+.|++|+++. .. .|+++++++ ..+++...... .....++...+-+...+ +.++.++++..+++.+
T Consensus 192 v~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~-------~G~~~s~~~a~l~~~~L----~tL~~r~~~~~~na~~ 260 (364)
T PRK07269 192 LHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNT-------TGAVLSPFDSYLLMRGL----KTLSLRMERSTANAQE 260 (364)
T ss_pred EecCceeccCCCcccceEEEeCcHHHHHHHHHHHHH-------hCCCCCHHHHHHHHcCC----CcHHHHHHHHHHHHHH
Confidence 9999996654 32 588777543 33333321111 01133333333222222 2478888899999999
Q ss_pred HHHHHhhcCCCeE-EeCCCCCcccceEEEEEccc-cchHHHhccc--CeEecccCccC----CCCCC----hhHHHHHcC
Q 040741 329 LLNGIKEKLDGVV-VNGSMERRYIGNLNLSFAYV-EGESLLMGLK--EVAVSSGSACT----SASLE----PSYVLRALG 396 (457)
Q Consensus 329 l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~--~i~~~~g~~~~----~~~~~----~~~~l~~~g 396 (457)
+.+.|++ .|.+. ++-++ .++++.|.+... ....+...++ .++.+-|...+ |.... +......+|
T Consensus 261 ~a~~L~~-~p~v~~v~ypg---~gg~~sf~~~~~~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~G 336 (364)
T PRK07269 261 VVAFLKK-SPAVKEVLYTG---KGGMISFKVADETRIPHILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVRHSYG 336 (364)
T ss_pred HHHHHHh-CCCccEEeCCC---cCcEEEEEECCHHHHHHHHHhCCcceEccCCCCcCeEeeCCcccccccCCHHHHHhcC
Confidence 9999998 78753 33222 367777776431 1224444442 34444444322 22111 123344677
Q ss_pred CCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 397 VDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 397 ~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
+.+ +.|||+++. ||++.+++.|+++++
T Consensus 337 i~~----~liRlsvGl----E~~~dli~dl~~al~ 363 (364)
T PRK07269 337 LTD----DLLRLSIGI----EDARDLIADLKQALE 363 (364)
T ss_pred CCC----CeEEEEecc----CCHHHHHHHHHHHhc
Confidence 765 899999996 788889998888764
No 237
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.92 E-value=4.7e-22 Score=197.92 Aligned_cols=327 Identities=17% Similarity=0.184 Sum_probs=207.9
Q ss_pred CCcEEecCCC------CCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHH
Q 040741 56 GRPLYLDMQA------TTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATE 129 (457)
Q Consensus 56 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~ 129 (457)
.+.-|+|+.+ -+...|++.+++.+.+......... + ..+...++.++|+++.+. ++++|++||++
T Consensus 29 dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~------~-~~~~~~~la~~l~~~~~~--~~v~~~~sGse 99 (389)
T PRK01278 29 DGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNL------Y-RIPEQERLAERLVENSFA--DKVFFTNSGAE 99 (389)
T ss_pred CCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccccc------c-CChHHHHHHHHHHhhCCC--CEEEEcCCcHH
Confidence 3445788755 2357899999999998753222110 1 125667888999998754 46999999999
Q ss_pred HHHHHHHHhhhhhcCCCC----EEEEcCCCCcchHHHHHHHHhcCcEEEEE----eCCCC----CCCCHHHHHHhcCCCc
Q 040741 130 SNNVSIKGVMHFYKDKKR----HVITTQTEHKCVLDSCRHLQQEGFEITYL----PVGAD----GIVNLDELRAAIRPDT 197 (457)
Q Consensus 130 a~~~al~~~~~~~~~~g~----~vi~~~~~h~~~~~~~~~~~~~G~~v~~v----~~~~~----~~~d~~~le~~i~~~t 197 (457)
|++.+++.+..+...+|+ +||+.+..|.+....+..+ +....+. +...+ ...|++++++++++++
T Consensus 100 A~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 176 (389)
T PRK01278 100 AVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAA---GGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNT 176 (389)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhc---cCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCe
Confidence 999999988654334454 7877776666655544433 1111111 11111 1258999999999899
Q ss_pred eEEEEecccccccccc----ChHHHHHHHHhcCCcEEEehhhh-cCCC--cc--cCCCCcccEEEeccccccCC-CCceE
Q 040741 198 GLISVMAVNNEIGVIQ----PMEEIGQICKEFKIPFHTDAAQA-LGKI--PV--DVEKWNVSLMSLSGHKIYGP-KGVGA 267 (457)
Q Consensus 198 ~li~i~~~~~~~G~~~----~l~~i~~l~~~~~v~li~D~a~~-~g~~--~~--~~~~~~~Di~~~s~~K~~g~-~G~G~ 267 (457)
++|+++.+++++|... .+++|.++|++||+++|+|++|+ +|.. .+ ......+|++ +++|.+++ ..+|+
T Consensus 177 ~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~ 254 (389)
T PRK01278 177 AAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIM--AVAKGIGGGFPLGA 254 (389)
T ss_pred EEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCEE--EEehhccCCcceEE
Confidence 9999999999888543 38999999999999999999997 3221 11 1112345765 55696552 23899
Q ss_pred EEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhh---cCCCeEEeC
Q 040741 268 LYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKE---KLDGVVVNG 344 (457)
Q Consensus 268 l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~~~~~~ 344 (457)
++++++..+.+.....+ ... +.++..++++.++++.+++ ....++.+++.+++++.|++ ..+++ ..
T Consensus 255 ~~~~~~~~~~~~~~~~~------~t~-~~~~~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~l~~l~~~~~~~--~~ 323 (389)
T PRK01278 255 CLATEEAAKGMTPGTHG------STY-GGNPLAMAVGNAVLDVILA--PGFLDNVQRMGLYLKQKLEGLVDRFPDV--IE 323 (389)
T ss_pred EEEcHHHHhccCCCCCC------CCC-CccHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHHhhCCCc--ee
Confidence 99987765555432221 111 3566667777777877654 23344455555555555443 13322 11
Q ss_pred CCCCcccceEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHH
Q 040741 345 SMERRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRA 422 (457)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~ 422 (457)
.. ...+.++.+.+. .+..++...+ +||.+.++. .+.|||+++..+++++++++
T Consensus 324 ~v-~g~G~~~~i~~~-~~~~~~~~~l~~~GV~~~p~~-----------------------~~~lR~~p~~~~~~~~i~~~ 378 (389)
T PRK01278 324 EV-RGKGLLLGLKCV-VPNRDLVQALRDEGLLTVGAG-----------------------DNVVRLLPPLIITEEEIDEA 378 (389)
T ss_pred eE-ecccEEEEEEEe-cCHHHHHHHHHHCCeEEeecC-----------------------CCEEEEeCCcccCHHHHHHH
Confidence 11 111233333332 2345566555 588776542 27899999988899999999
Q ss_pred HHHHHHHHHH
Q 040741 423 IELTVKQVEK 432 (457)
Q Consensus 423 ~~~l~~~~~~ 432 (457)
+++|++++++
T Consensus 379 l~~l~~~l~~ 388 (389)
T PRK01278 379 LERLERAAES 388 (389)
T ss_pred HHHHHHHHHh
Confidence 9999998865
No 238
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.92 E-value=1.1e-22 Score=204.22 Aligned_cols=307 Identities=18% Similarity=0.158 Sum_probs=195.8
Q ss_pred HHHHHHHHHHHh----C--CCCCcEEEeCChHHHHHHHHHHhhhhhc-CCCCEEEE-cCCCCcchHHHHHHHH-hcCcEE
Q 040741 103 VETARSQIADLI----G--ASPKEIIFTSGATESNNVSIKGVMHFYK-DKKRHVIT-TQTEHKCVLDSCRHLQ-QEGFEI 173 (457)
Q Consensus 103 ~~~~~~~la~~~----g--~~~~~i~~t~g~T~a~~~al~~~~~~~~-~~g~~vi~-~~~~h~~~~~~~~~~~-~~G~~v 173 (457)
..++++.+++++ | +++++|++|+|+++|+.+++.++..... ++|+.|++ ..++|+.+...+.... ..+..+
T Consensus 76 ~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~ 155 (416)
T PRK09440 76 KDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRP 155 (416)
T ss_pred CHHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeeccc
Confidence 456666666665 3 6788999999999999999998872000 25889999 6999998877554221 012222
Q ss_pred EEEeCCC---CCCCCHHHHHHhcCCCceEEEEeccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCCCcc---cC
Q 040741 174 TYLPVGA---DGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKIPV---DV 244 (457)
Q Consensus 174 ~~v~~~~---~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~~~---~~ 244 (457)
..++++. +..+|+++++ ++++++++++++++||||.+.+ +++|+++|++||++||+|++|+...... +.
T Consensus 156 ~~~~~~~~~~~~~~d~~~l~--~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~ 233 (416)
T PRK09440 156 NIELLPEGQFKYHVDFEHLH--IDEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEA 233 (416)
T ss_pred ccccccccccccCCCHHHcc--cCCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhc
Confidence 2333332 2468999987 4677899999999999999998 6678889999999999999996321111 11
Q ss_pred CC--CcccEEEeccccccCCCC--ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHH--HHhhHH-
Q 040741 245 EK--WNVSLMSLSGHKIYGPKG--VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIA--KKEMDY- 317 (457)
Q Consensus 245 ~~--~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~--~~~~~~- 317 (457)
.. .+.-+++.|++|. +.+| +|+++++++.++++...... ...+.+.....++..+++.. ...+.+
T Consensus 234 ~~~~~~~vI~~~SfSK~-~~pGlRiG~~i~~~~l~~~~~~~~~~-------~~~~~s~~~q~~~~~~l~~~~~~~~~~~~ 305 (416)
T PRK09440 234 TPLWNPNIILCMSLSKL-GLPGVRCGIVIADEEIIEALSNMNGI-------ISLAPGRLGPAIAAEMIESGDLLRLSETV 305 (416)
T ss_pred CccccCCeEEEeccccc-CCCcceEEEEeCCHHHHHHHHHHHHH-------hccCCCcHHHHHHHHHhccchHHHHHHHH
Confidence 11 1234778899995 5444 99999887766655443321 11234444444444444321 111222
Q ss_pred HHHHHHHHHHHHHHHHhhcCCC--eEEeCCCCCcccceEEEEEcc--ccchHHHhcc--cCeEecccCccCCCCCChhHH
Q 040741 318 DHKRITALHDRLLNGIKEKLDG--VVVNGSMERRYIGNLNLSFAY--VEGESLLMGL--KEVAVSSGSACTSASLEPSYV 391 (457)
Q Consensus 318 ~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~ 391 (457)
..+.++++.+.+.+.|.+.+++ +.+..+ +. ..++.+.++. .+..++...+ +||.+.+|..+.+.
T Consensus 306 ~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p-~g--g~fiw~~~~~~~~~~~~~~~~l~~~gV~v~pg~~F~~~------- 375 (416)
T PRK09440 306 IRPFYRQKVQLAIALLRRYLPDEPCLIHKP-EG--AIFLWLWFKDLPITTEELYQRLKARGVLVVPGHYFFPG------- 375 (416)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCeEEecC-CC--ceEEEEECCCCCCCHHHHHHHHHHCCEEEechHhhCCC-------
Confidence 4555667777777777763333 443332 21 3344445543 3455666655 69999998765321
Q ss_pred HHHcCCCcc--CCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 040741 392 LRALGVDED--MAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLREM 436 (457)
Q Consensus 392 l~~~g~~~~--~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~~ 436 (457)
.... ...+++||+++. +.++++.++++|++++++..+.
T Consensus 376 -----~~~~~~~~~~~iRis~~~--~~~~l~~~i~~l~~~~~~~~~~ 415 (416)
T PRK09440 376 -----LDEDWPHAHQCIRMNYVQ--DDEEIEKGIAILAEEVEKAYAE 415 (416)
T ss_pred -----CccccCCcCceEEEEecC--CHHHHHHHHHHHHHHHHHHhhc
Confidence 0000 013689999984 6899999999999999876543
No 239
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.91 E-value=1e-22 Score=198.93 Aligned_cols=308 Identities=18% Similarity=0.169 Sum_probs=215.3
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHH-HHhcC
Q 040741 92 THLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRH-LQQEG 170 (457)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~-~~~~G 170 (457)
.+.|++...+....+++.|+++-|.+. ++++++|..|+..++.+++ ++|++|++....|......++. +...|
T Consensus 46 ~~~Y~R~gnPt~~~le~~la~Le~g~~--a~~~~SGmaAi~~~l~~ll----~~Gd~iv~~~~~Y~~t~~~~~~~l~~~g 119 (386)
T PF01053_consen 46 GYIYSRYGNPTVRALEQRLAALEGGED--ALLFSSGMAAISAALLALL----KPGDHIVASDDLYGGTYRLLEELLPRFG 119 (386)
T ss_dssp SCSBTTTC-HHHHHHHHHHHHHHT-SE--EEEESSHHHHHHHHHHHHS-----TTBEEEEESSSSHHHHHHHHHCHHHTT
T ss_pred CcceeccccccHHHHHHHHHHhhcccc--eeeccchHHHHHHHHHhhc----ccCCceEecCCccCcchhhhhhhhcccC
Confidence 356677777899999999999999854 8889999999999999998 8999999999999998887774 56779
Q ss_pred cEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcC-CcEEEehhhhcCCCcccCCCCcc
Q 040741 171 FEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFK-IPFHTDAAQALGKIPVDVEKWNV 249 (457)
Q Consensus 171 ~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~-v~li~D~a~~~g~~~~~~~~~~~ 249 (457)
+++.+++.. |+++++++++++|++|+++.+.||+..+.|+++|+++||++| +++++|.+.+.+.. .+.-.+|+
T Consensus 120 v~v~~~d~~-----d~~~l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~-~~pL~~Ga 193 (386)
T PF01053_consen 120 VEVTFVDPT-----DLEALEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYN-QNPLELGA 193 (386)
T ss_dssp SEEEEESTT-----SHHHHHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTT-C-GGGGT-
T ss_pred cEEEEeCch-----hHHHHHhhccccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceee-eccCcCCc
Confidence 999999875 899999999999999999999999999999999999999998 99999999987632 34445689
Q ss_pred cEEEeccccccCCCC---ceEEEEec--CCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHH
Q 040741 250 SLMSLSGHKIYGPKG---VGALYMRR--RPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITA 324 (457)
Q Consensus 250 Di~~~s~~K~~g~~G---~G~l~~~~--~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~ 324 (457)
|+++.|.+|++++.+ .|++++++ +...+++..... ...+.++..+..+.. -...+.-++++..+
T Consensus 194 Divv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~-------~G~~~~p~da~ll~r----gl~Tl~~R~~~~~~ 262 (386)
T PF01053_consen 194 DIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRL-------LGATLSPFDAWLLLR----GLRTLPLRMERQNE 262 (386)
T ss_dssp SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHH-------HT-B--HHHHHHHHH----HHTTHHHHHHHHHH
T ss_pred eEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhh-------cCccchHHHHHHHhc----CCCcHHHHHHHHHH
Confidence 999999999776544 68888765 233333322211 111333333332222 22357888899999
Q ss_pred HHHHHHHHHhhcCCCeE-EeCC--CC-----------CcccceEEEEEccc--cchHHHhccc--CeEecccCccC----
Q 040741 325 LHDRLLNGIKEKLDGVV-VNGS--ME-----------RRYIGNLNLSFAYV--EGESLLMGLK--EVAVSSGSACT---- 382 (457)
Q Consensus 325 ~~~~l~~~l~~~~~~~~-~~~~--~~-----------~~~~~~~~~~~~~~--~~~~~~~~l~--~i~~~~g~~~~---- 382 (457)
++.++.+.|++ .|.+. |.-+ +. ...++++.|.+++. ....+...|+ .++.+-|...+
T Consensus 263 nA~~lA~~L~~-hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~~~l~l~~~~~SlGg~~SLi~~ 341 (386)
T PF01053_consen 263 NAEALAEFLEE-HPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRFLDALKLFSIAPSLGGVESLISH 341 (386)
T ss_dssp HHHHHHHHHHT-STTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHHHHH-SSSEESSS-SSSS-EEEE
T ss_pred HHHHHHHHHHh-CCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhHHhhhhhHhhhhhcCCccccccc
Confidence 99999999999 78774 3322 11 13457777887653 2345666664 34445555422
Q ss_pred CCCCCh----hHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 383 SASLEP----SYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 383 ~~~~~~----~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
+....+ .-..+..|+++ +.||++++. ||+|.+++.|+++++
T Consensus 342 p~~~~h~~~~~e~~~~~Gi~~----~liRlSvGl----Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 342 PASTSHRSLSPEERAEAGISD----GLIRLSVGL----EDPDDLIADLEQALE 386 (386)
T ss_dssp TTCTTTTTSCHHHHHHTTS-T----TEEEEE--S----S-HHHHHHHHHHHHH
T ss_pred ccchhhccCChhhhhccCCCC----CeeEEEecc----CCHHHHHHHHHHhcC
Confidence 222211 22356778776 899999997 889999999998875
No 240
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.91 E-value=3.1e-22 Score=197.82 Aligned_cols=334 Identities=17% Similarity=0.136 Sum_probs=218.6
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCC
Q 040741 68 PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKR 147 (457)
Q Consensus 68 ~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~ 147 (457)
.++++.++++.+.+.+.+- ++. .+..+++++.+++++|.+ ++++++|||.|+.+++.++.. ++|+
T Consensus 8 ~~~~~~~~~~~~~l~~~~~--------~g~--~~~~~~~e~~la~~~g~~--~~v~~~sgt~al~~~l~~~~~---~~Gd 72 (375)
T PRK11706 8 PVVGTELDYIQQAMSSGKL--------CGD--GGFTRRCQQWLEQRFGSA--KVLLTPSCTAALEMAALLLDI---QPGD 72 (375)
T ss_pred CCCHHHHHHHHHHHHcCCc--------cCC--CHHHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHhCC---CCCC
Confidence 3456667888887764321 111 156788999999999975 599999999999998876632 7899
Q ss_pred EEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCC-CCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcC
Q 040741 148 HVITTQTEHKCVLDSCRHLQQEGFEITYLPVGAD-GIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFK 226 (457)
Q Consensus 148 ~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~-~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~ 226 (457)
+||++.++|+++..++... |+++++++++.+ +.+|++++++++++++++|++++ ++|...++++|.++|+++|
T Consensus 73 ~Viv~~~t~~~~~~~~~~~---G~~~v~~d~d~~~~~~d~~~le~~i~~~tk~i~~~~---~~G~~~~~~~i~~la~~~~ 146 (375)
T PRK11706 73 EVIMPSYTFVSTANAFVLR---GAKIVFVDIRPDTMNIDETLIEAAITPKTRAIVPVH---YAGVACEMDTIMALAKKHN 146 (375)
T ss_pred EEEECCCCcHHHHHHHHHc---CCEEEEEecCCCcCCcCHHHHHHhcCCCCeEEEEeC---CCCCccCHHHHHHHHHHcC
Confidence 9999999999999887766 999999999865 47899999999999999888764 5899999999999999999
Q ss_pred CcEEEehhhhcCCCcccCCCC--cccEEEeccc--cccCCCCceEEEEec-CCCccccccccCCccccc-----------
Q 040741 227 IPFHTDAAQALGKIPVDVEKW--NVSLMSLSGH--KIYGPKGVGALYMRR-RPRIRVEPLINGGGQERG----------- 290 (457)
Q Consensus 227 v~li~D~a~~~g~~~~~~~~~--~~Di~~~s~~--K~~g~~G~G~l~~~~-~~~~~~~~~~~~~~~~~~----------- 290 (457)
+++|+|++|++|... +.... ..|+-++|+| |.+++...|++++++ +..+++......+.....
T Consensus 147 i~vIeD~a~a~g~~~-~~~~~g~~~~~~~~Sf~~~K~l~~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 225 (375)
T PRK11706 147 LFVVEDAAQGVMSTY-KGRALGTIGHIGCFSFHETKNYTAGEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTW 225 (375)
T ss_pred CEEEEECcccccccc-CCeeeecCcCEEEEeCCCCccccccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCccee
Confidence 999999999988642 11111 2477777777 977654235555543 444444444332210000
Q ss_pred cccCCCChhHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhhcCCC---eEEeCCCCCc--ccceEEEEEc-cccc
Q 040741 291 IRSGTLPTPLIVGFGSACEIAK-KEMDYDHKRITALHDRLLNGIKEKLDG---VVVNGSMERR--YIGNLNLSFA-YVEG 363 (457)
Q Consensus 291 ~~~~t~~~~~~~al~~al~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~---~~~~~~~~~~--~~~~~~~~~~-~~~~ 363 (457)
...|..... ..+.+++-..+ +.+++..++.+++.+++.+.|.+ +++ +.+...+... ....+.+.+. ..+.
T Consensus 226 ~~~g~~~~~--~~~~aa~~~~ql~~l~~~~~~R~~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 302 (375)
T PRK11706 226 VDIGSSYLP--SELQAAYLWAQLEAADRINQRRLALWQRYYDALAP-LAEAGRIELPSIPDDCKHNAHMFYIKLRDLEDR 302 (375)
T ss_pred eecccccCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcCCeeecCCCCCCCceeeEEEEEEECCcCCH
Confidence 011121111 11122222221 24677788888888999999887 652 4433212111 1122223332 2345
Q ss_pred hHHHhcc--cCeEecccCccCCCCCChhHHHHHcC-------CCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHH
Q 040741 364 ESLLMGL--KEVAVSSGSACTSASLEPSYVLRALG-------VDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 364 ~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g-------~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~ 430 (457)
.++...| +||.++... .+....| ..+.++ ..+....+.|.+.+....+.+|++++++.|++++
T Consensus 303 ~~l~~~L~~~gI~~~~~~--~p~~~~~--~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 303 SALINFLKEAGIMAVFHY--IPLHSSP--AGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred HHHHHHHHHCCCCccccC--CccCcch--hhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence 6777777 577765432 2222222 122221 1223456789999998899999999999999864
No 241
>PRK07049 methionine gamma-lyase; Validated
Probab=99.91 E-value=1.2e-22 Score=202.77 Aligned_cols=306 Identities=15% Similarity=0.112 Sum_probs=213.7
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHH-HHHhcCcEE
Q 040741 95 FGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCR-HLQQEGFEI 173 (457)
Q Consensus 95 ~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~G~~v 173 (457)
|++..++....+++.+|++.|.+ ++++++||+.|+.+++.+++ ++||+|++..+.|..+...+. .++..|+++
T Consensus 77 y~R~~~Pt~~~Le~~lA~leg~~--~~iv~~sG~~Ai~~~l~al~----~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~ 150 (427)
T PRK07049 77 YSRFNHPNSEIVEDRLAVYEGAE--SAALFSSGMSAIATTLLAFV----RPGDVILHSQPLYGGTETLLAKTFRNFGVGA 150 (427)
T ss_pred ccCCCCcCHHHHHHHHHHHhCCC--cEEEEccHHHHHHHHHHHHh----CCCCEEEEcCCCcccHHHHHHHHHHhcCcEE
Confidence 34444567789999999999965 48999999999999999998 899999999999999877643 345669887
Q ss_pred EEEeCCCCCCCCHHHHHHhcC-----CCceEEEEeccccccccccChHHHHHHHHh------cCCcEEEehhhhcCCCcc
Q 040741 174 TYLPVGADGIVNLDELRAAIR-----PDTGLISVMAVNNEIGVIQPMEEIGQICKE------FKIPFHTDAAQALGKIPV 242 (457)
Q Consensus 174 ~~v~~~~~~~~d~~~le~~i~-----~~t~li~i~~~~~~~G~~~~l~~i~~l~~~------~~v~li~D~a~~~g~~~~ 242 (457)
+.++.. .|++++++++. +++++|++++++||+|.+.++++|.+++++ +++++++|+++......
T Consensus 151 v~~~~~----~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~- 225 (427)
T PRK07049 151 VGFADG----LSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQ- 225 (427)
T ss_pred EEEeCC----CCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccC-
Confidence 666521 46777776663 578999999999999999999999999988 89999999997643221
Q ss_pred cCCCCcccEEEeccccccC-CCC--ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHH
Q 040741 243 DVEKWNVSLMSLSGHKIYG-PKG--VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDH 319 (457)
Q Consensus 243 ~~~~~~~Di~~~s~~K~~g-~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~ 319 (457)
.....+.|+++.|++|.+| ..| +|+++.+++..+++...... ..++.++.....+...++ .+..++
T Consensus 226 ~pl~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~-------~g~~ls~~~a~l~~r~L~----tl~~R~ 294 (427)
T PRK07049 226 KPLEHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSA-------IGTQLDPHSCWMLGRSLE----TLVLRM 294 (427)
T ss_pred CccccCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHh-------cCCCCCHHHHHHHHcCCC----hHHHHH
Confidence 1224468999999999666 344 79988776655555433221 112455555554444433 456667
Q ss_pred HHHHHHHHHHHHHHhhcCCCeEE-eCC----CC-----------CcccceEEEEEccc--cchHHHhccc--CeEecccC
Q 040741 320 KRITALHDRLLNGIKEKLDGVVV-NGS----ME-----------RRYIGNLNLSFAYV--EGESLLMGLK--EVAVSSGS 379 (457)
Q Consensus 320 ~~~~~~~~~l~~~l~~~~~~~~~-~~~----~~-----------~~~~~~~~~~~~~~--~~~~~~~~l~--~i~~~~g~ 379 (457)
++..+++..+.+.|++ .|++.- +-+ +. ...++++.|.+.+. ....++..|+ .++++-|.
T Consensus 295 ~~~~~~a~~la~~L~~-~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~l~~~~~slG~ 373 (427)
T PRK07049 295 ERANRNARAVAEFLRD-HPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKGGQAAAFRFLNALQIFKLAVSLGG 373 (427)
T ss_pred HHHHHHHHHHHHHHHh-CCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcCCHHHHHHHHHcCcccEEcccCCC
Confidence 7778899999999998 777633 211 11 13467777887531 1235556653 45555565
Q ss_pred ccCC----CCCCh----hHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 380 ACTS----ASLEP----SYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 380 ~~~~----~~~~~----~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
..+. ..+.+ .-.....|+.+ +.|||+++. ||+|.+++.|+++++
T Consensus 374 ~~sli~~~~~~~h~~~~~~~~~~~gi~~----~liR~svGl----E~~~dl~~dl~~al~ 425 (427)
T PRK07049 374 TESLASHPASMTHSGVPADVRERIGVLE----STIRLSIGI----EHPDDLIADLAQALD 425 (427)
T ss_pred CCceeeCCCccccccCCHHHHHhcCCCc----CeEEEEeCc----CCHHHHHHHHHHHHh
Confidence 4332 22111 11233566665 899999997 788889999998886
No 242
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.91 E-value=2.2e-22 Score=199.42 Aligned_cols=304 Identities=17% Similarity=0.166 Sum_probs=206.4
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC
Q 040741 101 VAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA 180 (457)
Q Consensus 101 ~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~ 180 (457)
....++++.+++++|.+ ++++|+|||+|+.+++.++. ++||.| ++.+.|.++...+... |++++.++++.
T Consensus 53 ~g~~~Leeaia~~~g~~--~vv~t~~Gt~Al~la~~al~----~pGD~V-~~~~~f~~~~~~i~~~---Ga~pv~v~i~~ 122 (431)
T cd00617 53 KSFYDLEDAVQDLFGFK--HIIPTHQGRGAENILFSILL----KPGRTV-PSNMHFDTTRGHIEAN---GAVPVDLVIDE 122 (431)
T ss_pred CCHHHHHHHHHHHHCCC--eEEEcCCHHHHHHHHHHHhC----CCCCEE-ccCCcccchHHHHHhC---CCEeEEEeccc
Confidence 45679999999999986 49999999999999999998 899987 5777777777766666 99999999862
Q ss_pred ----------CCCCCHHHHHHhcCCC----ceEEEEecccccc-ccccC---hHHHHHHHHhcCCcEEEehhhhcCC---
Q 040741 181 ----------DGIVNLDELRAAIRPD----TGLISVMAVNNEI-GVIQP---MEEIGQICKEFKIPFHTDAAQALGK--- 239 (457)
Q Consensus 181 ----------~~~~d~~~le~~i~~~----t~li~i~~~~~~~-G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~--- 239 (457)
.|.+|+++|+++|+++ +++|+++.++|++ |.+++ +++|.++|++||++||.|+|+..+.
T Consensus 123 ~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~ 202 (431)
T cd00617 123 AHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYF 202 (431)
T ss_pred ccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhh
Confidence 3559999999999876 7899999999997 88886 5678999999999999999987531
Q ss_pred --------CcccCCC------CcccEEEecccc-ccCCCCceEEEEecC-CCccccccccCCccccccccCCCChhHHHH
Q 040741 240 --------IPVDVEK------WNVSLMSLSGHK-IYGPKGVGALYMRRR-PRIRVEPLINGGGQERGIRSGTLPTPLIVG 303 (457)
Q Consensus 240 --------~~~~~~~------~~~Di~~~s~~K-~~g~~G~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a 303 (457)
....+.+ ...|.+++|++| ..++.| |+++++++ +.++++.... ..+....+|..+...+.+
T Consensus 203 i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~G-G~i~~~d~~l~~~~~~~~~--~~~~~~~~gG~~~r~~~A 279 (431)
T cd00617 203 IKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIG-GFLALRDDELYEEARQRVV--LYEGFVTYGGMAGRDMEA 279 (431)
T ss_pred hhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccc-eEEEeCcHHHHHHHHHhcc--ccCCccccccccHHHHHH
Confidence 1111111 136899999999 556665 89999874 5555543211 011112334555556655
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcc---------ccchHHHhcc---c
Q 040741 304 FGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAY---------VEGESLLMGL---K 371 (457)
Q Consensus 304 l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l---~ 371 (457)
+..+++...+ .+. .++..+.++++.+.|.+ . |+.+..+. . ...+.+..+. .++.++...| .
T Consensus 280 ~A~gL~e~~~-~~~-l~~~~~~r~~l~~~L~~-~-G~~v~~P~-G--gh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~ 352 (431)
T cd00617 280 LAQGLREAVE-EDY-LRHRVEQVRYLGDRLDE-A-GVPIVEPA-G--GHAVFIDAREFLPHIPQEQFPAQALAAELYLEA 352 (431)
T ss_pred HHHHHHhccc-HHH-HHHHHHHHHHHHHHHHH-C-CCCccCCC-c--ceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHc
Confidence 5445543211 122 33333355888899988 3 77666532 2 2333344331 1255666555 4
Q ss_pred CeEecc-cCccCCCCCChhHHHHHcCCCccC------CCCeEEEecCC-CCCHHHHHHHHHHHHHHHHHHHhcC
Q 040741 372 EVAVSS-GSACTSASLEPSYVLRALGVDEDM------AHTSIRFGIGR-FTTEAEVDRAIELTVKQVEKLREMS 437 (457)
Q Consensus 372 ~i~~~~-g~~~~~~~~~~~~~l~~~g~~~~~------~~~~iRi~~~~-~~t~edid~~~~~l~~~~~~~~~~~ 437 (457)
||.+.. |.... |.++.- .-..+|+++.+ .-|.+++|++++++.+..++-....
T Consensus 353 gV~~~~~g~~~~-------------~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~~~~~~ 413 (431)
T cd00617 353 GVRAVELGIFSA-------------GRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYERREDIR 413 (431)
T ss_pred CeeEEeecceec-------------ccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhhHhhCC
Confidence 676433 43211 111111 23789999987 4589999999999999998754433
No 243
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.91 E-value=9.9e-22 Score=195.73 Aligned_cols=270 Identities=16% Similarity=0.191 Sum_probs=187.4
Q ss_pred ceecccccCCCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCC
Q 040741 47 ITLKGVRIAGRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSG 126 (457)
Q Consensus 47 ~~~~~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g 126 (457)
...+.+.+..+.+|+++.+.+++++++++++.+++... ++... ....+. ....+..+++.+++++|+++ .+++++
T Consensus 71 ~~lr~vinatg~v~~tNlg~s~l~~~vieAv~~~~~~y-~~l~~-~l~~g~-~g~r~~~le~~lA~l~gae~--alvv~s 145 (454)
T TIGR00474 71 PSLRRVINATGVVLHTNLGRAPLAEEAIEAVTDAARGY-SNLEY-DLETGK-RGSRYSHVEGLLCELTGAED--ALVVNN 145 (454)
T ss_pred ccccceeCCCCcEEeccCCCCCCCHHHHHHHHHHHhcc-cchhc-cccccc-cchHHHHHHHHHHHHhCCCc--EEEECC
Confidence 44566777788899999999999999999999998753 33221 011111 12467889999999999976 677888
Q ss_pred hHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchH---HHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEe
Q 040741 127 ATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVL---DSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVM 203 (457)
Q Consensus 127 ~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~---~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~ 203 (457)
++.|+.+++.+ + .+|++||+++.+|..+. .....+...|+++++++.+ +..|+++++++|+++|++|+++
T Consensus 146 g~aAi~l~l~~-l----~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~--~~~~l~dle~aI~~~T~lv~~~ 218 (454)
T TIGR00474 146 NAAAVLLALNT-L----AKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTT--NRTHLKDYEDAITENTALLLKV 218 (454)
T ss_pred HHHHHHHHHHH-h----CCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCC--CCCCHHHHHHhcCcCCEEEEEE
Confidence 99999888854 4 68999999998864321 1123345669999998764 3358999999999999999999
Q ss_pred ccccc--cc--cccChHHHHHHHHhcCCcEEEehhhhc---------CCCcc--cCCCCcccEEEeccccccCCCCceEE
Q 040741 204 AVNNE--IG--VIQPMEEIGQICKEFKIPFHTDAAQAL---------GKIPV--DVEKWNVSLMSLSGHKIYGPKGVGAL 268 (457)
Q Consensus 204 ~~~~~--~G--~~~~l~~i~~l~~~~~v~li~D~a~~~---------g~~~~--~~~~~~~Di~~~s~~K~~g~~G~G~l 268 (457)
+++|+ .| .+.|+++|+++||+||+++++|.+.+. +..|. +..+.++|++++|++|++|++..|++
T Consensus 219 h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~~G~i 298 (454)
T TIGR00474 219 HTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQAGII 298 (454)
T ss_pred ccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCeEEEE
Confidence 99997 36 578999999999999999999986331 22222 33456899999999996653347999
Q ss_pred EEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHH------------hhHHHHHHHHHHHHHHHHHHhh
Q 040741 269 YMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKK------------EMDYDHKRITALHDRLLNGIKE 335 (457)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~------------~~~~~~~~~~~~~~~l~~~l~~ 335 (457)
+++++.++++..... .+.+ ...-..++++.+++..... .+....++..+++..+.+.|++
T Consensus 299 ~g~~~~i~~l~~~~l----~r~l---r~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~ 370 (454)
T TIGR00474 299 VGKKELIERLKKNPL----TRAL---RVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKA 370 (454)
T ss_pred EECHHHHHhhhhchh----HHHH---hhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHh
Confidence 998876554432111 1111 1122233344444433221 1334455666777788887776
No 244
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.91 E-value=4.7e-22 Score=211.90 Aligned_cols=329 Identities=13% Similarity=0.111 Sum_probs=238.9
Q ss_pred CCcEEecCCCCCC----CCHHHHHHHHHHHhhccC-CCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHH
Q 040741 56 GRPLYLDMQATTP----VDPRVLDAMLPFYLSRYG-NPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATES 130 (457)
Q Consensus 56 ~~~i~l~~~~~~~----~~~~v~~a~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a 130 (457)
.+.+|+++.+.++ .|+.+++++.+...-+-. .|. ......+..+...+++.++++++|++++++.++.++|.+
T Consensus 100 kN~~~~~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytPY--qaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAa 177 (993)
T PLN02414 100 KNKVFKSYIGMGYYNTHVPPVILRNILENPGWYTQYTPY--QAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAA 177 (993)
T ss_pred cCCccccccCCCCCCccCCHHHHHHHHhChHHHhhcCCC--chHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHH
Confidence 4556888888887 888888888887542111 122 122234455788999999999999999999999999999
Q ss_pred HHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHH-HHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEecccccc
Q 040741 131 NNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRH-LQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEI 209 (457)
Q Consensus 131 ~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~-~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~ 209 (457)
.+.++++... .++++++|++++..|+++...++. ++..|++++.++.+.. | ...+.+..+ +.+..|.+
T Consensus 178 aea~~~a~~~-~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~---~------~~~~~v~~v-lvq~P~~~ 246 (993)
T PLN02414 178 AEAMAMCNNI-LKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF---D------YSSGDVCGV-LVQYPATD 246 (993)
T ss_pred HHHHHHHHhc-ccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh---c------cccCceEEE-EEecCCCC
Confidence 9998887753 112458899999999999988764 4667999999987531 1 112222222 34444559
Q ss_pred ccccChHHHHHHHHhcCCcEEEehhhhcCCCcc-cCCCCcccEEEeccccccCCCC-----ceEEEEecCCCcccccccc
Q 040741 210 GVIQPMEEIGQICKEFKIPFHTDAAQALGKIPV-DVEKWNVSLMSLSGHKIYGPKG-----VGALYMRRRPRIRVEPLIN 283 (457)
Q Consensus 210 G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~-~~~~~~~Di~~~s~~K~~g~~G-----~G~l~~~~~~~~~~~~~~~ 283 (457)
|.+.|+++|+++||++|+++++ +++.++...+ ++.++|+|+++++.|||++|.| .|+++++++....+...+.
T Consensus 247 G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~PgriV 325 (993)
T PLN02414 247 GEVLDYAEFVKNAHANGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRII 325 (993)
T ss_pred eEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccccCCCCCCCCeeEEEECHHHHhhCCCccc
Confidence 9999999999999999999999 8888777766 4778899999999999864443 8999999976544433344
Q ss_pred CCc-----------------cccccccCCCChhHHHHHHHHHHHH------HHhhHHHHHHHHHHHHHHHHHHhhcCCCe
Q 040741 284 GGG-----------------QERGIRSGTLPTPLIVGFGSACEIA------KKEMDYDHKRITALHDRLLNGIKEKLDGV 340 (457)
Q Consensus 284 ~~~-----------------~~~~~~~~t~~~~~~~al~~al~~~------~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 340 (457)
|++ +..++..+|.|+....++.+++..+ ..+++++.+++.+++.++.+.|.+ +++
T Consensus 326 G~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~--~G~ 403 (993)
T PLN02414 326 GVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKK--LGF 403 (993)
T ss_pred CcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhh--cCC
Confidence 431 1223457799987777766666433 146889999999999999999987 577
Q ss_pred EEeCCCCCcccceEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHH
Q 040741 341 VVNGSMERRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAE 418 (457)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~ed 418 (457)
.+..+ .....+.+.++ +..++...| +||.++.. ..+.+|+|+..++|++|
T Consensus 404 ~~~~~---~~f~~vt~~~~--~~~~v~~~L~~~gI~l~~~-----------------------~~~~lrvs~~e~~T~ed 455 (993)
T PLN02414 404 QVQSL---PFFDTVKVKCS--DADAIADAAAKVGINLRVV-----------------------DANTVTVSFDETTTLED 455 (993)
T ss_pred ccCCC---CCcCeEEEecC--CHHHHHHHHHHCCCeeEEe-----------------------cCCeEEEEeeccCCHHH
Confidence 77654 22445555543 346666666 56655321 02679999999999999
Q ss_pred HHHHHHHHHH
Q 040741 419 VDRAIELTVK 428 (457)
Q Consensus 419 id~~~~~l~~ 428 (457)
||.++++|..
T Consensus 456 Id~L~~~l~~ 465 (993)
T PLN02414 456 VDKLFKVFAG 465 (993)
T ss_pred HHHHHHHHcc
Confidence 9999999963
No 245
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.91 E-value=6e-22 Score=198.17 Aligned_cols=341 Identities=15% Similarity=0.167 Sum_probs=221.7
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhh-----h
Q 040741 68 PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHF-----Y 142 (457)
Q Consensus 68 ~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~-----~ 142 (457)
.++++.++++.+.+.+.+ ...| +...++++.+++++|.+ ++++++|||+|+.+++.++... .
T Consensus 41 ~~~~~~~~a~~~~~~~~~-------~~~G----~~~~~fe~~lA~~~g~~--~~v~~~sGt~al~~aL~al~~~~~~~~~ 107 (438)
T PRK15407 41 VIDAKELQNLVDASLDFW-------LTTG----RFNDAFEKKLAEFLGVR--YALLVNSGSSANLLAFSALTSPKLGDRA 107 (438)
T ss_pred CCCHHHHHHHHHHHHhCc-------ccCC----hhHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHHhhccccccC
Confidence 455555666666554311 1112 45778999999999985 4999999999999999876310 1
Q ss_pred cCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC-CCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHH
Q 040741 143 KDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG-ADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQI 221 (457)
Q Consensus 143 ~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~-~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l 221 (457)
.++|++||++.++|.++..++... |++++.++++ .++.+|++++++++++++++|+++++ .|...++++|.++
T Consensus 108 ~~pGd~VIv~~~t~~a~~~~v~~~---G~~pv~vdvd~~~~~id~~~le~~i~~~tkaVi~~~~---~G~p~dl~~I~~l 181 (438)
T PRK15407 108 LKPGDEVITVAAGFPTTVNPIIQN---GLVPVFVDVELPTYNIDASLLEAAVSPKTKAIMIAHT---LGNPFDLAAVKAF 181 (438)
T ss_pred CCCCCEEEECCCCcHHHHHHHHHc---CCEEEEEecCCCcCCcCHHHHHHHcCcCCeEEEEeCC---CCChhhHHHHHHH
Confidence 178999999999999998887766 9999999987 46779999999999999999999875 7888999999999
Q ss_pred HHhcCCcEEEehhhhcCCCccc--CCCCcccEEEeccc--c-ccCCCCceEEEEecCCCccccccccCCccc--------
Q 040741 222 CKEFKIPFHTDAAQALGKIPVD--VEKWNVSLMSLSGH--K-IYGPKGVGALYMRRRPRIRVEPLINGGGQE-------- 288 (457)
Q Consensus 222 ~~~~~v~li~D~a~~~g~~~~~--~~~~~~Di~~~s~~--K-~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~-------- 288 (457)
|+++|++||+|++|++|+..-+ ...++ |+.++||+ | +....| |+++++++.+.+....+..++..
T Consensus 182 a~~~gi~vIeDaa~a~G~~~~g~~~G~~g-d~~~fSf~~~k~~~~geG-G~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~ 259 (438)
T PRK15407 182 CDKHNLWLIEDNCDALGSTYDGRMTGTFG-DIATLSFYPAHHITMGEG-GAVFTNDPLLKKIIESFRDWGRDCWCAPGCD 259 (438)
T ss_pred HHHCCCEEEEECccchhhhcCCeeeeccC-ceEEEeCCCCCCccccCc-eEEEECCHHHHHHHHHHHHhCcccccccccc
Confidence 9999999999999999977543 22333 77777775 5 433445 99998876443322222222110
Q ss_pred -------------------cccccCCCChh-HHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhhcCCC-eEEeCCC
Q 040741 289 -------------------RGIRSGTLPTP-LIVGFGSACEIAK-KEMDYDHKRITALHDRLLNGIKEKLDG-VVVNGSM 346 (457)
Q Consensus 289 -------------------~~~~~~t~~~~-~~~al~~al~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~ 346 (457)
..+........ -+.-+.+|+...+ +.++++.++.+++++++.+.|.+ +++ +.+...+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~-~~~~~~~~~~~ 338 (438)
T PRK15407 260 NTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLAS-LEDFLILPEAT 338 (438)
T ss_pred cccccccccccccccccccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCccccCcCC
Confidence 00000000000 0112223333322 35788888999999999999988 775 3333222
Q ss_pred CCcccceEEEEE--cc---ccchHHHhcc--cCeEecccCccCCCCCChhHHHH------HcCCCccCCCCeEEEecCCC
Q 040741 347 ERRYIGNLNLSF--AY---VEGESLLMGL--KEVAVSSGSACTSASLEPSYVLR------ALGVDEDMAHTSIRFGIGRF 413 (457)
Q Consensus 347 ~~~~~~~~~~~~--~~---~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~------~~g~~~~~~~~~iRi~~~~~ 413 (457)
....+.+..+.+ .. .+.+++...| +||....... .+....|-+.-. .+...+....+.|-+.+...
T Consensus 339 ~~~~~~~~~~~i~~~~~~~~~Rd~l~~~L~~~GI~~~~~~~-~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~ 417 (438)
T PRK15407 339 PNSDPSWFGFPITVKEDAGFTRVELVKYLEENKIGTRLLFA-GNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPG 417 (438)
T ss_pred CCCeeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCccccCC-CccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCC
Confidence 222233323322 21 2356777777 5765543221 011122221110 11112223467888888888
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 040741 414 TTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 414 ~t~edid~~~~~l~~~~~ 431 (457)
.+++|+++++++++++++
T Consensus 418 l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 418 LTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 899999999999999875
No 246
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.91 E-value=7.8e-22 Score=198.18 Aligned_cols=330 Identities=15% Similarity=0.142 Sum_probs=215.9
Q ss_pred CcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHH
Q 040741 57 RPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATES 130 (457)
Q Consensus 57 ~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a 130 (457)
+.-|+|+.+. +..+|++.+++.+.+......+. +....+...++++.++++++.+.++++|++||++|
T Consensus 35 G~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~------~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea 108 (413)
T cd00610 35 GNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSL------GFFYNEPAVELAELLLALTPEGLDKVFFVNSGTEA 108 (413)
T ss_pred CCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccC------cccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHH
Confidence 3457776552 13789999999999864211111 11123678899999999999777789999999999
Q ss_pred HHHHHHHhhhhhcCCCCEEEEcCCC-CcchHHHHHHHHhc---------CcEEEEEeCCCC------CCCCHHHHHHhcC
Q 040741 131 NNVSIKGVMHFYKDKKRHVITTQTE-HKCVLDSCRHLQQE---------GFEITYLPVGAD------GIVNLDELRAAIR 194 (457)
Q Consensus 131 ~~~al~~~~~~~~~~g~~vi~~~~~-h~~~~~~~~~~~~~---------G~~v~~v~~~~~------~~~d~~~le~~i~ 194 (457)
+..+++.+..+ .++++|++.+.. |.+........... +.++..++.+.. ...|+++++++++
T Consensus 109 ~~~al~~~~~~--~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 186 (413)
T cd00610 109 VEAALKLARAY--TGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALE 186 (413)
T ss_pred HHHHHHHHHHH--cCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHh
Confidence 99999987633 456777776654 54444443332110 123555655421 2348899999987
Q ss_pred C---CceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhhcC-CC----cccCCCCcccEEEeccccccCC
Q 040741 195 P---DTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQALG-KI----PVDVEKWNVSLMSLSGHKIYGP 262 (457)
Q Consensus 195 ~---~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~~g-~~----~~~~~~~~~Di~~~s~~K~~g~ 262 (457)
+ ++++|+++.+++++|.+.| +++|.++|++||+++|+|++|+.. .. ..+.....+|++ +++|.+|+
T Consensus 187 ~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d~~--t~sK~l~~ 264 (413)
T cd00610 187 EHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIV--TLGKGLGG 264 (413)
T ss_pred cCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCCCeE--EEcccccC
Confidence 6 5788889999888999887 999999999999999999999732 11 111122245765 45596553
Q ss_pred -CCceEEEEecCCCccc--cccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCC
Q 040741 263 -KGVGALYMRRRPRIRV--EPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDG 339 (457)
Q Consensus 263 -~G~G~l~~~~~~~~~~--~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 339 (457)
.++|+++++++..+.+ ..... ....+.++..++++.++++.+.. +...++.+++.+++++.|+. +..
T Consensus 265 g~~~g~~~~~~~~~~~~~~~~~~~-------~~t~~~~~~~~~a~~a~l~~l~~--~~~~~~~~~~~~~l~~~l~~-~~~ 334 (413)
T cd00610 265 GLPLGAVLGREEIMDAFPAGPGLH-------GGTFGGNPLACAAALAVLEVLEE--EGLLENAAELGEYLRERLRE-LAE 334 (413)
T ss_pred ccccEEEEEcHHHHHhhccCCCCC-------CCCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHH-HHh
Confidence 3489999887655554 11111 11224455666677777877765 46677888888888888776 321
Q ss_pred e-EEeCCCCCcccceEEEEEccc---------cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEE
Q 040741 340 V-VVNGSMERRYIGNLNLSFAYV---------EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIR 407 (457)
Q Consensus 340 ~-~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iR 407 (457)
. .+.... ...+.++.+.+... ....+...+ +||.+.++. .+.+|
T Consensus 335 ~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~-----------------------~~~lR 390 (413)
T cd00610 335 KHPLVGDV-RGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSG-----------------------GNVIR 390 (413)
T ss_pred hCCcEEEe-ecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecC-----------------------CCEEE
Confidence 0 111111 11245555555422 223455444 577776542 26899
Q ss_pred EecCCCCCHHHHHHHHHHHHHHH
Q 040741 408 FGIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 408 i~~~~~~t~edid~~~~~l~~~~ 430 (457)
|+++..++++||+++++++++++
T Consensus 391 ~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 391 LLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred EECCCcCCHHHHHHHHHHHHHhC
Confidence 99999999999999999998753
No 247
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.91 E-value=5.4e-22 Score=207.42 Aligned_cols=312 Identities=12% Similarity=0.129 Sum_probs=209.8
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCCcEEEeC-ChHHHHHHHHHHhhhhhc----CCCCEEEEcCCCCcchHHHHHHHHhcC
Q 040741 96 GWESEVAVETARSQIADLIGASPKEIIFTS-GATESNNVSIKGVMHFYK----DKKRHVITTQTEHKCVLDSCRHLQQEG 170 (457)
Q Consensus 96 ~~~~~~~~~~~~~~la~~~g~~~~~i~~t~-g~T~a~~~al~~~~~~~~----~~g~~vi~~~~~h~~~~~~~~~~~~~G 170 (457)
..+..+.+.++++++++++|.+. +.+.+ +|+.|...+++++..++. ..+++|+++...|.++...+.. .|
T Consensus 538 sQG~lq~i~elq~~l~eLtGmd~--~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~---~G 612 (954)
T PRK12566 538 AEGYRAMIDELEAWLCAITGFDA--ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQM---AG 612 (954)
T ss_pred hcCHHHHHHHHHHHHHHHHCCCe--EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHH---CC
Confidence 34455899999999999999976 56666 577777788888775443 2357889999999888765444 49
Q ss_pred cEEEEEeCCCCCCCCHHHHHHhcC---CCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCccc-CCC
Q 040741 171 FEITYLPVGADGIVNLDELRAAIR---PDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVD-VEK 246 (457)
Q Consensus 171 ~~v~~v~~~~~~~~d~~~le~~i~---~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~-~~~ 246 (457)
++++.++.+.+|.+|+++|+++++ ++++.|++.++++-.+...|+++|+++||++|+++++|+++..+...+. +.+
T Consensus 613 ieVv~Vp~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~ 692 (954)
T PRK12566 613 MRVVIVECDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPAD 692 (954)
T ss_pred CEEEEeccCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhh
Confidence 999999999899999999999997 6777788888776554546699999999999999999999998777665 477
Q ss_pred CcccEEEecccccc-CCCCceEEEEec-CCCccccccccCCcc----ccccccCCCC---hhHHHHHHHHHHHHHH-h--
Q 040741 247 WNVSLMSLSGHKIY-GPKGVGALYMRR-RPRIRVEPLINGGGQ----ERGIRSGTLP---TPLIVGFGSACEIAKK-E-- 314 (457)
Q Consensus 247 ~~~Di~~~s~~K~~-g~~G~G~l~~~~-~~~~~~~~~~~~~~~----~~~~~~~t~~---~~~~~al~~al~~~~~-~-- 314 (457)
+|+|++++++||+| +|.|.|..++.. ...+.+.+.+.++.. ..+-+.++.+ .....-+..|..++.. +
T Consensus 693 ~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~e 772 (954)
T PRK12566 693 IGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAMMGPQ 772 (954)
T ss_pred cCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHHHHHCHH
Confidence 89999999999954 465555555554 333444444433210 0101122222 1121223334444433 3
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEc------cccchHHHhcc--cCeEecccCccCCCCC
Q 040741 315 MDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFA------YVEGESLLMGL--KEVAVSSGSACTSASL 386 (457)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l--~~i~~~~g~~~~~~~~ 386 (457)
+.+..+....+++|+.+.|.+ ..++.. .+.+..+..-..+.+. +.+..++..+| .||....-.
T Consensus 773 Lk~aa~~ailnAnYla~rL~~-~~~v~~-~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~Gihapt~~------- 843 (954)
T PRK12566 773 LADASEVAILSANYLANQLGG-AFPVLY-RGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFHAPTMS------- 843 (954)
T ss_pred HHHHHHHHHHHHHHHHHHhHh-hCCCCc-CCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHCCcEEeEEe-------
Confidence 344444446789999999977 444433 2222221222223322 23446677776 454432110
Q ss_pred ChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 387 EPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 387 ~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
+. ..+.+||++..+++++|||+++++|+...++++
T Consensus 844 --------fP-----v~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~ 878 (954)
T PRK12566 844 --------FP-----VPGTLMVEPTESESKAELDRFVEAMLSIRAEIG 878 (954)
T ss_pred --------ec-----cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 01 137999999999999999999999999998864
No 248
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.91 E-value=2.9e-21 Score=203.32 Aligned_cols=348 Identities=11% Similarity=0.074 Sum_probs=229.2
Q ss_pred EEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccc-hhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHH
Q 040741 59 LYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHL-FGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKG 137 (457)
Q Consensus 59 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~ 137 (457)
.++..++.+-..+.+.+.+.....++.. .+..... ...+..+...++++++++++|.+. .-+..++|+.|...++++
T Consensus 488 ~fi~lGsctmk~na~v~~l~~s~~ef~t-~hPyqPe~~sqG~lq~i~elq~~l~eltGmd~-~Sl~p~aGA~gE~agL~a 565 (939)
T TIGR00461 488 SMIPLGSCTMKLNATAEMMPITWPEFSN-IHPFQPSNQVEGYQELIAQLEKWLCSITGFDA-ISLQPNSGAQGEYAGLRV 565 (939)
T ss_pred cCCCCccCCCccCHHHHHHHhcchhhcC-cCCCCchHHhHHHHHHHHHHHHHHHHHHCCCC-cccCCchHHHHHHHHHHH
Confidence 4556666664334444444332222222 1211111 233455899999999999999984 355666677777667777
Q ss_pred hhhhhc----CCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcC---CCceEEEEeccccccc
Q 040741 138 VMHFYK----DKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIR---PDTGLISVMAVNNEIG 210 (457)
Q Consensus 138 ~~~~~~----~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~---~~t~li~i~~~~~~~G 210 (457)
+..++. .+++.|+++...|.++..++..+ |++++.++++.+|.+|+++|+++++ +++++|++++++| +|
T Consensus 566 iR~y~~~rge~~R~~vlip~saHgtnPasa~~~---G~~Vv~V~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G 641 (939)
T TIGR00461 566 IRSYHESRGENHRNICLIPVSAHGTNPASAAMA---GMQVVPVNCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HG 641 (939)
T ss_pred HHHHHHhcCCCCCCEEEEEccccCcCHHHHHHC---CCEEEEeccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Cc
Confidence 765432 23467999999999998776665 9999999999899999999999997 4899999999988 79
Q ss_pred cccC-hHHHHHHHHhcCCcEEEehhhhcCCC-cccCCCCcccEEEecccc-cc-----CCCCceEEEEecCCCccccccc
Q 040741 211 VIQP-MEEIGQICKEFKIPFHTDAAQALGKI-PVDVEKWNVSLMSLSGHK-IY-----GPKGVGALYMRRRPRIRVEPLI 282 (457)
Q Consensus 211 ~~~~-l~~i~~l~~~~~v~li~D~a~~~g~~-~~~~~~~~~Di~~~s~~K-~~-----g~~G~G~l~~~~~~~~~~~~~~ 282 (457)
.+.| +++|+++||++|.++++|+|+..+.. .....++++|++++|.|| ++ |++|+|++++++.+...+....
T Consensus 642 ~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~ 721 (939)
T TIGR00461 642 VFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHD 721 (939)
T ss_pred eecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCc
Confidence 9987 99999999999999999999977443 334567899999999999 65 5677899999975332222110
Q ss_pred cC-------CccccccccC--CCChhHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCC-CCCccc
Q 040741 283 NG-------GGQERGIRSG--TLPTPLIVGFGSACEI-AKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGS-MERRYI 351 (457)
Q Consensus 283 ~~-------~~~~~~~~~~--t~~~~~~~al~~al~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~ 351 (457)
.+ ..+..+..+. +-+...+......+.. ..+++.+..+..-.+++|+.+.|.+ . +.+.-+ ....+.
T Consensus 722 v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~-~--~~~l~~~~~~~~~ 798 (939)
T TIGR00461 722 VVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD-H--YPILFVGTLKHVA 798 (939)
T ss_pred ccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc-c--CcccccCCCCcee
Confidence 00 0111011111 1111111111112222 2356888899999999999999987 3 233322 122233
Q ss_pred ceEEEEEc------cccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHH
Q 040741 352 GNLNLSFA------YVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAI 423 (457)
Q Consensus 352 ~~~~~~~~------~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~ 423 (457)
.-+.+.++ ++...++..+| +|+..-.-+ +. ..+.+-|.+....+++|||+++
T Consensus 799 hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hapt~~---------------~p-----v~g~lmiepTE~eskeelD~f~ 858 (939)
T TIGR00461 799 HECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPTLS---------------FP-----VPGTLMVEPTESESLEELDRFC 858 (939)
T ss_pred EEEEEeccchhhhcCCCHHHHHHHHHhCCeeccccC---------------Cc-----cCCeEEEEeeccCCHHHHHHHH
Confidence 44455554 24556777777 455432100 00 1146667777778999999999
Q ss_pred HHHHHHHHHHHh
Q 040741 424 ELTVKQVEKLRE 435 (457)
Q Consensus 424 ~~l~~~~~~~~~ 435 (457)
++|.+..+++++
T Consensus 859 ~al~~I~~e~~~ 870 (939)
T TIGR00461 859 DAMIAIKEEINA 870 (939)
T ss_pred HHHHHHHHHHHH
Confidence 999999888765
No 249
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.91 E-value=5.1e-21 Score=190.52 Aligned_cols=328 Identities=14% Similarity=0.180 Sum_probs=212.0
Q ss_pred CCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHH
Q 040741 56 GRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATE 129 (457)
Q Consensus 56 ~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~ 129 (457)
.+.-|+|+.+. +..+|++.+++.+.+......... + ..+...+++++|+++++.+ .++|++||++
T Consensus 33 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~------~-~~~~~~~la~~L~~~~~~~--~~~f~~SGse 103 (397)
T TIGR03246 33 QGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGNG------Y-TNEPVLRLAKKLVDATFAD--KVFFCNSGAE 103 (397)
T ss_pred CCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccCc------c-CCHHHHHHHHHHHhhCCCC--EEEEeCCcHH
Confidence 34457777552 256899999999998753211111 1 1256778999999998754 6999999999
Q ss_pred HHHHHHHHhhhhhc-----CCCCEEEEcCCCCcchHHHHHHHHhc---------CcEEEEEeCCCCCCCCHHHHHHhcCC
Q 040741 130 SNNVSIKGVMHFYK-----DKKRHVITTQTEHKCVLDSCRHLQQE---------GFEITYLPVGADGIVNLDELRAAIRP 195 (457)
Q Consensus 130 a~~~al~~~~~~~~-----~~g~~vi~~~~~h~~~~~~~~~~~~~---------G~~v~~v~~~~~~~~d~~~le~~i~~ 195 (457)
|++.+++....+.. ++.+.|......|.+...+....... ...+..++.+ |++++++++.+
T Consensus 104 A~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~ 178 (397)
T TIGR03246 104 ANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYN-----DLAAAKALISD 178 (397)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCC-----CHHHHHHHhcc
Confidence 99999998765431 23344555666788777655433110 0122333333 89999999988
Q ss_pred CceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc--ccCC--CCcccEEEeccccccC-CCCc
Q 040741 196 DTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP--VDVE--KWNVSLMSLSGHKIYG-PKGV 265 (457)
Q Consensus 196 ~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~--~~~~--~~~~Di~~~s~~K~~g-~~G~ 265 (457)
++++|+++.++++.|.+.| +++|.++|++||+++|+|++|. +|... .... ...+|+++ ++|.+| ...+
T Consensus 179 ~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~t--~~K~lggG~pi 256 (397)
T TIGR03246 179 KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILT--SAKALGGGFPI 256 (397)
T ss_pred CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCCEEE--eehhhhCCcce
Confidence 8999999998888886643 8999999999999999999984 22111 1111 22467775 559543 2338
Q ss_pred eEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCC-eEEeC
Q 040741 266 GALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDG-VVVNG 344 (457)
Q Consensus 266 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~ 344 (457)
|+++++++..+.+.....+ ... ..++..+++..++++.+.+ +.+.++.+++.+++++.|++ +.. +.++.
T Consensus 257 gav~~~~~i~~~~~~~~~~------~t~-~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~~~~l~~~L~~-l~~~~~~~~ 326 (397)
T TIGR03246 257 GAMLTTTEIAAHLKVGTHG------TTY-GGNPLACAVAGKVLDLVNT--PELLAGVKQRHDLFVDGLEK-INARYNVFS 326 (397)
T ss_pred eEEEEcHHHHHhccCCCcC------CCC-CCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHH-HHhcCCCeE
Confidence 9999987765555432111 112 2455666667777877654 56778888888899888877 321 11111
Q ss_pred CCCCcccceEEEEEcc---ccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHH
Q 040741 345 SMERRYIGNLNLSFAY---VEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEV 419 (457)
Q Consensus 345 ~~~~~~~~~~~~~~~~---~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edi 419 (457)
+. ...+.++.+.+.. .....+...+ +|+.+.+. +.+.|||+++..++++||
T Consensus 327 ~v-rg~G~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----------------------g~~~lR~~p~~~~t~~~i 382 (397)
T TIGR03246 327 EI-RGKGLLIGAVLTEAYQGKAKQFVNAAAEEGVIALIA-----------------------GPNVVRFAPSLVISDDDI 382 (397)
T ss_pred ee-ecCceEEEEEEcCchhhHHHHHHHHHHHCCeEEeec-----------------------CCCEEEEeCCCCCCHHHH
Confidence 11 1123333344321 1233444444 56665421 126899999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 040741 420 DRAIELTVKQVEKL 433 (457)
Q Consensus 420 d~~~~~l~~~~~~~ 433 (457)
|+++++|+++++++
T Consensus 383 ~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 383 DEGLARFERAIEQV 396 (397)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999988753
No 250
>PRK08354 putative aminotransferase; Provisional
Probab=99.90 E-value=4e-21 Score=185.23 Aligned_cols=295 Identities=12% Similarity=0.014 Sum_probs=186.8
Q ss_pred CCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHH
Q 040741 56 GRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSI 135 (457)
Q Consensus 56 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al 135 (457)
.+.+.|+.+-+...|+.+.+++.+.+...... . ....++++++++.|. ++++|+|+++++.+++
T Consensus 8 ~~~i~l~~~~np~~p~~~~~a~~~~~~~~~~y--------p-----~~~~l~~~ia~~~~~---~I~vt~G~~~al~~~~ 71 (311)
T PRK08354 8 EGLIDFSASVNPYPPEWLDEMFERAKEISGRY--------T-----YYEWLEEEFSKLFGE---PIVITAGITEALYLIG 71 (311)
T ss_pred cceeEecCCCCCCCCHHHHHHHHHHHHHhhcC--------C-----ChHHHHHHHHHHHCC---CEEECCCHHHHHHHHH
Confidence 35677777655555788888888775432111 1 134678999999983 5999999999998776
Q ss_pred HHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccC-
Q 040741 136 KGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQP- 214 (457)
Q Consensus 136 ~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~- 214 (457)
. +. .+|+.|++..++|+.+...++.. |.+++.++ +|++.++++++ +++++++++|+||||.+.+
T Consensus 72 ~-~~----~~gd~vlv~~P~y~~~~~~~~~~---g~~~~~~~------~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~ 136 (311)
T PRK08354 72 I-LA----LRDRKVIIPRHTYGEYERVARFF---AARIIKGP------NDPEKLEELVE-RNSVVFFCNPNNPDGKFYNF 136 (311)
T ss_pred H-hh----CCCCeEEEeCCCcHHHHHHHHHc---CCEEeecC------CCHHHHHHhhc-CCCEEEEecCCCCCCCccCH
Confidence 4 33 47999999999999999888776 98887653 57899998887 5678889999999999998
Q ss_pred --hHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCC--ceEEEEecCCCccccccccCCccccc
Q 040741 215 --MEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKG--VGALYMRRRPRIRVEPLINGGGQERG 290 (457)
Q Consensus 215 --l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~ 290 (457)
+++|.++|+++|+++|+|+++.-....-........+++.|++|.||.+| +|++++ ..+.+......
T Consensus 137 ~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~~~~~vi~~~S~SK~~~l~GlRiG~~v~---~~~~l~~~~~~------ 207 (311)
T PRK08354 137 KELKPLLDAVEDRNALLILDEAFIDFVKKPESPEGENIIKLRTFTKSYGLPGIRVGYVKG---FEEAFRSVRMP------ 207 (311)
T ss_pred HHHHHHHHHhhhcCcEEEEeCcchhccccccccCCCcEEEEeccHhhcCCccceeeeeee---hHHHHHHcCCC------
Confidence 56677788999999999999963221111111334688899999888666 899987 22333322211
Q ss_pred cccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHHhcc
Q 040741 291 IRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGL 370 (457)
Q Consensus 291 ~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 370 (457)
...+.....++...++...+.+.+.++...+.. +.+.+ .. .. +++ .+++.+.+ .+..++...+
T Consensus 208 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~-~l---~~-~~~---~~~~~~~~--~~~~~~~~~l 270 (311)
T PRK08354 208 ---WSIGSTGYAFLEFLIEDDFEHLRKTMPLIWREK----ERFEK-AL---YV-KSD---ANFFIKDV--GDAEKFVEFL 270 (311)
T ss_pred ---ccCCHHHHHHHHHHHHhHHHHHHHHHHHHHHHH----HHHHH-hc---CC-CCC---CcEEEEEC--CCHHHHHHHH
Confidence 122333332222222210011122222222222 22322 11 11 111 33333332 2445566655
Q ss_pred --cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Q 040741 371 --KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQ 429 (457)
Q Consensus 371 --~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~ 429 (457)
+||.+.+|..+. . .++|||+++. .++.+++++++++.
T Consensus 271 ~~~gv~v~~g~~f~--------------~-----~~~iRi~~~~---~~~~~~l~~al~~~ 309 (311)
T PRK08354 271 KRNGILVRDCTSFG--------------L-----PGYIRFSVRD---REENEKLIRALREW 309 (311)
T ss_pred HHCCeEEEecccCC--------------C-----CCeEEEEeCC---HHHHHHHHHHHHHh
Confidence 699999886431 1 2799999984 67788888777753
No 251
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.90 E-value=2.4e-22 Score=197.30 Aligned_cols=297 Identities=15% Similarity=0.123 Sum_probs=195.2
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHH-HHHhcCcEE
Q 040741 95 FGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCR-HLQQEGFEI 173 (457)
Q Consensus 95 ~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~G~~v 173 (457)
|++...+...++++.++++.+ ++++++++|+.|+.+++.++. ++||+|+++.+.|..+...++ .+...|+++
T Consensus 45 y~ry~~p~~~~Le~~lA~l~~---~~~v~~~sG~~Ai~~~l~all----~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v 117 (366)
T PRK07582 45 YGRASNPTWRALEAALGELEG---AEALVFPSGMAAITAVLRALL----RPGDTVVVPADGYYQVRALAREYLAPLGVTV 117 (366)
T ss_pred eECCCCccHHHHHHHHHHHcC---CCEEEECCHHHHHHHHHHHhc----CCCCEEEEeCCCcHhHHHHHHHHHhcCeEEE
Confidence 333444678899999999992 347778888999999998887 899999999988877766554 345569999
Q ss_pred EEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhh--cCCCcccCCCCcccE
Q 040741 174 TYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQA--LGKIPVDVEKWNVSL 251 (457)
Q Consensus 174 ~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~--~g~~~~~~~~~~~Di 251 (457)
++++.+.++ . .+.+++++|++++++||+|.+.|+++|.++|+++|+++++|++++ .+..+++ .++|+
T Consensus 118 ~~v~~~~~~-----~---~~~~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~~~~p~~---~g~Di 186 (366)
T PRK07582 118 REAPTAGMA-----E---AALAGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPLGQRPLE---LGADL 186 (366)
T ss_pred EEECCCChH-----H---HhccCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCccccCchh---cCCcE
Confidence 999876321 1 334689999999999999999999999999999999999999985 3444443 46899
Q ss_pred EEecccccc-CCCC--ceEEEEec-CCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 040741 252 MSLSGHKIY-GPKG--VGALYMRR-RPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHD 327 (457)
Q Consensus 252 ~~~s~~K~~-g~~G--~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~ 327 (457)
++.|++|++ |+.| +|+++.++ +..+++...... ...++++.....+...+ ..++.++++..+++.
T Consensus 187 vv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~-------~g~~~~~~~a~l~~r~l----~tl~~R~~~~~~na~ 255 (366)
T PRK07582 187 VVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLL-------AGAIPGPFEAWLAHRSL----GTLGLRFARQCANAL 255 (366)
T ss_pred EEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHH-------hCCCCCHHHHHHHHhcc----ccHHHHHHHHHHHHH
Confidence 999999955 6666 58888753 333333322211 11233433333222222 235677788889999
Q ss_pred HHHHHHhhcCCCeEEeC---CCCC-----------cccceEEEEEcccc-chHHHhccc--CeEecccCccCCCCCChhH
Q 040741 328 RLLNGIKEKLDGVVVNG---SMER-----------RYIGNLNLSFAYVE-GESLLMGLK--EVAVSSGSACTSASLEPSY 390 (457)
Q Consensus 328 ~l~~~l~~~~~~~~~~~---~~~~-----------~~~~~~~~~~~~~~-~~~~~~~l~--~i~~~~g~~~~~~~~~~~~ 390 (457)
.+.+.|++ .|.+.-+. -+.. ..++++.|.+...+ ...++..++ .++++-|...+.. +..
T Consensus 256 ~la~~L~~-~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~--~~~- 331 (366)
T PRK07582 256 AVAELLAG-HPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELADAAAAERFVAASRLVVAATSFGGVHTSA--DRR- 331 (366)
T ss_pred HHHHHHHh-CCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCCHHHHHHHHHhCCcceecccCCCccchh--hhH-
Confidence 99999998 78764322 1111 25778888885321 123344442 2334444433321 110
Q ss_pred HHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 391 VLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 391 ~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
...+ .....+.||++++.. +.+.+++.|+++++.
T Consensus 332 --~~~~--~~~~~~liR~svGlE----~~~dli~dl~~al~~ 365 (366)
T PRK07582 332 --ARWG--DAVPEGFVRLSCGIE----DTDDLVADLERALDA 365 (366)
T ss_pred --HHcC--CCCCCCeEEEEeccC----CHHHHHHHHHHHHhh
Confidence 1122 112348999999984 555555666655543
No 252
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.90 E-value=5.3e-23 Score=196.51 Aligned_cols=219 Identities=16% Similarity=0.168 Sum_probs=173.4
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC
Q 040741 101 VAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA 180 (457)
Q Consensus 101 ~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~ 180 (457)
..+.++++.+|+++|++. .+++++|+|.++.+++.+++ ++|++|+++++.|+++..++... |.++++++.+.
T Consensus 59 g~i~~~~~~~A~~~ga~~-~~~~~~Gst~a~~~~l~al~----~~gd~Vlv~~~~h~s~~~~~~~~---g~~~~~v~~~~ 130 (294)
T cd00615 59 GPIKEAQELAARAFGAKH-TFFLVNGTSSSNKAVILAVC----GPGDKILIDRNCHKSVINGLVLS---GAVPVYLKPER 130 (294)
T ss_pred hHHHHHHHHHHHHhCCCC-EEEEcCcHHHHHHHHHHHcC----CCCCEEEEeCCchHHHHHHHHHC---CCEEEEecCcc
Confidence 578999999999999863 34459999999999999988 89999999999999999887765 99999998753
Q ss_pred C------CCCCHHHHHHhcC--CCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhc-----CCCcccCCCC
Q 040741 181 D------GIVNLDELRAAIR--PDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQAL-----GKIPVDVEKW 247 (457)
Q Consensus 181 ~------~~~d~~~le~~i~--~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~-----g~~~~~~~~~ 247 (457)
+ +.+|+++++++++ +++++++++++ |++|.+.|+++|+++|+++|+++++|+||+. +..+......
T Consensus 131 ~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~ 209 (294)
T cd00615 131 NPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMA 209 (294)
T ss_pred CcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhc
Confidence 2 3789999999996 46888989887 6799999999999999999999999999985 2334344456
Q ss_pred cccEEEecccccc-CCCCceEEEEecCCCc--cccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHH
Q 040741 248 NVSLMSLSGHKIY-GPKGVGALYMRRRPRI--RVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITA 324 (457)
Q Consensus 248 ~~Di~~~s~~K~~-g~~G~G~l~~~~~~~~--~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~ 324 (457)
++|+++.|+||.+ |+.+.|++.++++... ++.... ..+..++++...++++..++.++..+-.+..++..+
T Consensus 210 ~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~~------~~~~ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~ 283 (294)
T cd00615 210 GADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVNEAL------NLHQSTSPSYLILASLDVARAMMALEGKELVEELIE 283 (294)
T ss_pred CCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHHHHH------HHHCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 8999999999954 5666677777654222 111111 113456888899999999988876555667888888
Q ss_pred HHHHHHHHHh
Q 040741 325 LHDRLLNGIK 334 (457)
Q Consensus 325 ~~~~l~~~l~ 334 (457)
+.+++++.|.
T Consensus 284 ~~~~~r~~l~ 293 (294)
T cd00615 284 LALYARQEIN 293 (294)
T ss_pred HHHHHHHHHh
Confidence 8888888775
No 253
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.90 E-value=1.9e-21 Score=194.47 Aligned_cols=327 Identities=17% Similarity=0.226 Sum_probs=210.2
Q ss_pred CcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHH
Q 040741 57 RPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATES 130 (457)
Q Consensus 57 ~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a 130 (457)
+.-|+|+.+. +..+|++.+++.+.+.... ...+ .+ ..+...++++.++++++.+ .++|++|||+|
T Consensus 30 g~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~-~~~~---~~---~~~~~~~~~~~l~~~~~~~--~~~~~~SGs~A 100 (400)
T PTZ00125 30 GKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLT-LTSR---AF---YNDVLGLAEKYITDLFGYD--KVLPMNSGAEA 100 (400)
T ss_pred CCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcc-cccc---cc---cCHHHHHHHHHHHhCCCCC--EEEEeCCcHHH
Confidence 3457777543 1368999999999976431 1111 01 1257788999999998864 59999999999
Q ss_pred HHHHHHHhhhhh-c-----CCCCEEEEcC-CCCcchHHHHHHHHhcCc---------EEEEEeCCCCCCCCHHHHHHhcC
Q 040741 131 NNVSIKGVMHFY-K-----DKKRHVITTQ-TEHKCVLDSCRHLQQEGF---------EITYLPVGADGIVNLDELRAAIR 194 (457)
Q Consensus 131 ~~~al~~~~~~~-~-----~~g~~vi~~~-~~h~~~~~~~~~~~~~G~---------~v~~v~~~~~~~~d~~~le~~i~ 194 (457)
++.+++.+..+. . ..+++|++.+ ..|......+........ .+..++ ..|+++++++++
T Consensus 101 ~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~le~~l~ 175 (400)
T PTZ00125 101 GETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVD-----YNDVEALEKLLQ 175 (400)
T ss_pred HHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeC-----CCCHHHHHHHhC
Confidence 999999775321 0 1245565544 556666555543311000 111222 238999999996
Q ss_pred -CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCC----cccCCCCcccEEEeccccccC-C-
Q 040741 195 -PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKI----PVDVEKWNVSLMSLSGHKIYG-P- 262 (457)
Q Consensus 195 -~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~----~~~~~~~~~Di~~~s~~K~~g-~- 262 (457)
+++++|+++.++|++|.+.| +++|.++|++||+++|+|++++ +|.. ..+.....+|++++| |.++ +
T Consensus 176 ~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~~~s--K~l~~g~ 253 (400)
T PTZ00125 176 DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIVLLG--KALSGGL 253 (400)
T ss_pred CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEEEEc--ccccCCC
Confidence 67899999999999999998 9999999999999999999986 4321 122223346877655 9544 3
Q ss_pred CCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhc---CCC
Q 040741 263 KGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEK---LDG 339 (457)
Q Consensus 263 ~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~ 339 (457)
.++|+++++++..+.+.....+. .. ..++....+..++++.+.++ ...++.+++.+++++.|.+. .+.
T Consensus 254 ~~ig~v~~~~~~~~~~~~~~~~~------t~-~~~~~~~~aa~~~l~~i~~~--~~~~~~~~~~~~l~~~l~~l~~~~~~ 324 (400)
T PTZ00125 254 YPISAVLANDDVMLVIKPGEHGS------TY-GGNPLACAVAVEALEVLKEE--KLAENAQRLGEVFRDGLKELLKKSPW 324 (400)
T ss_pred cCcEEEEEcHHHHhhccCCCCCC------CC-CcCHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 25899999987666554322111 11 33455566666677776542 34455666677777776651 122
Q ss_pred eEEeCCCCCcccceEEEEEcc---ccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCC
Q 040741 340 VVVNGSMERRYIGNLNLSFAY---VEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFT 414 (457)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~ 414 (457)
+.... ..+.++.+.++. ....++...+ +||.+.++. .+.|||+++..+
T Consensus 325 ~~~~~----~~g~~~~v~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-----------------------~~~lRi~~~~~~ 377 (400)
T PTZ00125 325 VKEIR----GKGLLNAIVFDHSDGVNAWDLCLKLKENGLLAKPTH-----------------------DNIIRFAPPLVI 377 (400)
T ss_pred eEEEe----cccEEEEEEEccCcchHHHHHHHHHHHCCeEEeecC-----------------------CCEEEEECCccC
Confidence 21111 123344444442 1234455555 577765431 278999999889
Q ss_pred CHHHHHHHHHHHHHHHHHHHh
Q 040741 415 TEAEVDRAIELTVKQVEKLRE 435 (457)
Q Consensus 415 t~edid~~~~~l~~~~~~~~~ 435 (457)
+++++++++++|.++++++.+
T Consensus 378 ~~~~i~~~l~~l~~~l~~~~~ 398 (400)
T PTZ00125 378 TKEQLDQALEIIKKVLKSFDS 398 (400)
T ss_pred CHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999987753
No 254
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.90 E-value=8.7e-22 Score=173.62 Aligned_cols=347 Identities=13% Similarity=0.172 Sum_probs=229.4
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhcc--CCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHH
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRY--GNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNN 132 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~ 132 (457)
.++|.+|--..+ .+++++.+|+.++...+- ..-. .........+.+..+.+.+++|+|++. +-+|.|+.+|=.
T Consensus 15 r~~iNv~PiQrGGiLt~eArkal~E~gDGYSvCD~C~--~Grldei~kPpI~~F~~dlaeFlg~D~--~R~t~GARe~Kf 90 (382)
T COG1103 15 RGFINVNPIQRGGILTEEARKALLEWGDGYSVCDFCL--EGRLDEITKPPIKDFLEDLAEFLGMDE--VRVTAGAREAKF 90 (382)
T ss_pred cCccccChhhccCcCCHHHHHHHHHhcCCcchhhhhc--cCccccccCCcHHHHHHHHHHHhCCce--eeecccchhhHH
Confidence 466677654444 789999999999875421 0100 011112233567788888999999976 999999999999
Q ss_pred HHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC--CCCCCCHHHHHHhcC----C---CceEEEEe
Q 040741 133 VSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG--ADGIVNLDELRAAIR----P---DTGLISVM 203 (457)
Q Consensus 133 ~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~le~~i~----~---~t~li~i~ 203 (457)
+++.+++ ++||-|+++...|.+..-++... |.++..+|.. ++..++++...+.|+ + .+.+..++
T Consensus 91 avMhal~----~~gd~vV~D~~aHYttyvAAEra---gl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallT 163 (382)
T COG1103 91 AVMHALC----KEGDWVVVDSLAHYTTYVAAERA---GLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLT 163 (382)
T ss_pred HHHHHhc----cCCCEEEEcCcchHHHHHHHHhc---CCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEe
Confidence 9999999 89999999999999999887666 9999999854 455788887777664 2 36899999
Q ss_pred ccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEecccc-ccCCCCceEEEEecCCCccccccc
Q 040741 204 AVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHK-IYGPKGVGALYMRRRPRIRVEPLI 282 (457)
Q Consensus 204 ~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K-~~g~~G~G~l~~~~~~~~~~~~~~ 282 (457)
++....|.+.+.+.++++|++||+++++.+|++.|.+|++....++|++++|+|| +-+...+|++.++.+..+.+-...
T Consensus 164 h~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~S 243 (382)
T COG1103 164 HVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRS 243 (382)
T ss_pred ccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccccccCCCEEEecCccchhccCCeeEEeehhHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999999999999 444455999999987554432221
Q ss_pred cC-Ccc-ccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcc
Q 040741 283 NG-GGQ-ERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAY 360 (457)
Q Consensus 283 ~~-~~~-~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (457)
.- +.. +.....-|.-...++-+-+++-...+.+. ..+.-.+.++++.+.+++ +.|+...|..- .....+.|.-+.
T Consensus 244 g~~~~~KEvellGCT~rGapivTlmASfP~V~eRVk-rWdeEv~kaR~fv~elEk-igg~~qlG~rP-k~HdLm~Fetp~ 320 (382)
T COG1103 244 GRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERVK-RWDEEVEKARWFVAELEK-IGGVKQLGERP-KNHDLMKFETPV 320 (382)
T ss_pred ccccccceeeeecccccCchHHHHHhcCHHHHHHHH-HHHHHHHHHHHHHHHHHH-hhhHHHhCCCC-cccceeeecCch
Confidence 00 000 00000111111122222223323222222 223334567888899999 88787766432 223333343332
Q ss_pred ccchHHHhcc--cCeEecccCccCCCCCChhHHHHHc---CCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 361 VEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRAL---GVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 361 ~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~---g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
. ..+...- ++..+.. -|+.- |+.+. ...++.+++-. .+.|+++++++++++++++.
T Consensus 321 f--~eIakk~~r~gyFlY~-------------ELK~RgI~GI~~G-~Tk~~K~svyG-l~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 321 F--HEIAKKHKRKGYFLYE-------------ELKKRGIHGIQPG-QTKYFKLSVYG-LSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred H--HHHHHhCcCCceeeHH-------------HHHhcCccccccC-ceeEEEEEeec-CCHHHHHHHHHHHHHHHHhc
Confidence 1 1111111 1111100 11111 11111 12577777654 46899999999999998764
No 255
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.90 E-value=2.7e-22 Score=198.12 Aligned_cols=311 Identities=17% Similarity=0.164 Sum_probs=205.8
Q ss_pred HHHHHHHHHHHHHHhCCCC-CcEEEeCChH-HHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEe
Q 040741 100 EVAVETARSQIADLIGASP-KEIIFTSGAT-ESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLP 177 (457)
Q Consensus 100 ~~~~~~~~~~la~~~g~~~-~~i~~t~g~T-~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~ 177 (457)
.....++++.+++++|++. ..++++++|| .++.+++.++... +.+++.||+++..|.+...++..+ |+++++++
T Consensus 104 ~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~-~~~gd~VI~p~~th~S~~kAi~~~---G~~pv~Vd 179 (444)
T TIGR03531 104 YKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHK-RPKAKYVIWPRIDQKSCIKAISTA---GFEPRVIE 179 (444)
T ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCc-CCCCCEEEEECcChHHHHHHHHHc---CCeEEEee
Confidence 4678889999999999863 3499999999 6888888876621 125899999999999999999888 99999999
Q ss_pred C--C-CCCCCCHHHHHHhcCC---CceEEEEeccc-cccccccChHHHHHHHHhcCCcEEEehhhhcCCCcc-----cCC
Q 040741 178 V--G-ADGIVNLDELRAAIRP---DTGLISVMAVN-NEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPV-----DVE 245 (457)
Q Consensus 178 ~--~-~~~~~d~~~le~~i~~---~t~li~i~~~~-~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~-----~~~ 245 (457)
. + .++.+|+++|+++|++ ++.++++..++ +..|...|+++|.++|++||+++|+|+||+.+.... ...
T Consensus 180 ~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g~ 259 (444)
T TIGR03531 180 TVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINKAI 259 (444)
T ss_pred eeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhccc
Confidence 5 3 5578999999999986 34454444443 334578999999999999999999999999765331 111
Q ss_pred CC-cccEEEeccccccC-CCCceEEEEec-CCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHH
Q 040741 246 KW-NVSLMSLSGHKIYG-PKGVGALYMRR-RPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRI 322 (457)
Q Consensus 246 ~~-~~Di~~~s~~K~~g-~~G~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~ 322 (457)
.. .+|++++|+||.+. |.+.|++++++ +..+++.....+. ..+.+...++..++....++++++.++.
T Consensus 260 ~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~~y~g~---------~~~s~~~~~~~~ll~~G~~g~~~li~~~ 330 (444)
T TIGR03531 260 KVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISKSYPGR---------ASASPSLDVLITLLSLGSKGYLELLKER 330 (444)
T ss_pred cccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHHhccCC---------CCChHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 12 36999999999655 55567776744 3444444332221 1222334444455555566789999999
Q ss_pred HHHHHHHHHHHhhcCC---CeEEeCCCCCcccceEEEEEc---cccchHHHhcc--cCe----EecccCccCCCCCChhH
Q 040741 323 TALHDRLLNGIKEKLD---GVVVNGSMERRYIGNLNLSFA---YVEGESLLMGL--KEV----AVSSGSACTSASLEPSY 390 (457)
Q Consensus 323 ~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l--~~i----~~~~g~~~~~~~~~~~~ 390 (457)
.++++++.+.|.+ +. +-++...+.+ +.-+.+++. ..+...+-..| ++| .+.+|..- .-..+
T Consensus 331 ~~~a~~l~~~L~~-l~~~~~~~~~~~~~n--~is~~~~~~~~~~~~~~~~g~~l~~~~v~g~r~v~~~~~~----~~~~~ 403 (444)
T TIGR03531 331 KEMYKYLKELLQK-LAERHGERLLDTPEN--PISSAMTLSTLKGKDPTMLGSMLYSRRVTGPRVVTNGDSK----TVGGC 403 (444)
T ss_pred HHHHHHHHHHHHH-HHHhhCcEeecCCCC--ceeEEEecccccccCHHHHHHHHHhCCCCCceeecCCCce----EECCE
Confidence 9999999888876 32 3344433332 333334443 22334444444 221 12223200 00011
Q ss_pred HHHHcCCC-ccCCCCeEEEecCCCCCHHHHHHHHHHHHHHH
Q 040741 391 VLRALGVD-EDMAHTSIRFGIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 391 ~l~~~g~~-~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~ 430 (457)
.+..+|.+ +.....++-++....++++|||.++++|++++
T Consensus 404 ~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 404 EFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred EeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence 22333332 22345688888888899999999999998763
No 256
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.90 E-value=6.6e-21 Score=189.22 Aligned_cols=322 Identities=17% Similarity=0.195 Sum_probs=209.1
Q ss_pred EEecCCC---CC---CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHH
Q 040741 59 LYLDMQA---TT---PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNN 132 (457)
Q Consensus 59 i~l~~~~---~~---~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~ 132 (457)
-|+|+.+ +. +.+|.+.+++.+.+.... ... ..+ ..+...++++.+++++|.+ ++++++||++|+.
T Consensus 28 ~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~---~~~---~~~~~~~l~~~la~~~g~~--~~~~~~sg~~a~~ 98 (379)
T TIGR00707 28 EYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLV-HVS---NLY---YTEPQEELAEKLVEHSGAD--RVFFCNSGAEANE 98 (379)
T ss_pred EEEEcCcchhhccCCCCCHHHHHHHHHHHhhcc-ccc---ccc---CCHHHHHHHHHHHhhCCCC--EEEEeCCcHHHHH
Confidence 4666655 22 456999999999887532 111 111 2367889999999999975 6999999999999
Q ss_pred HHHHHhhhhhcC---CCCEEEEcCCCCcchHHHHHHHHhcCcEEE----EEeCCCCC----CCCHHHHHHhcCCCceEEE
Q 040741 133 VSIKGVMHFYKD---KKRHVITTQTEHKCVLDSCRHLQQEGFEIT----YLPVGADG----IVNLDELRAAIRPDTGLIS 201 (457)
Q Consensus 133 ~al~~~~~~~~~---~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~----~v~~~~~~----~~d~~~le~~i~~~t~li~ 201 (457)
++++.+..+..+ ++++|++..+.|......+... +.... ..+...+. ..|++++++.+++++++|+
T Consensus 99 ~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~ 175 (379)
T TIGR00707 99 AALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSA---TGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAVI 175 (379)
T ss_pred HHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHh---cCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEEE
Confidence 999876533221 3688888777765554444433 22111 11111111 1289999999988899999
Q ss_pred Eecccccccccc-C---hHHHHHHHHhcCCcEEEehhhh-cCCC----cccCCCCcccEEEeccccccCC-CCceEEEEe
Q 040741 202 VMAVNNEIGVIQ-P---MEEIGQICKEFKIPFHTDAAQA-LGKI----PVDVEKWNVSLMSLSGHKIYGP-KGVGALYMR 271 (457)
Q Consensus 202 i~~~~~~~G~~~-~---l~~i~~l~~~~~v~li~D~a~~-~g~~----~~~~~~~~~Di~~~s~~K~~g~-~G~G~l~~~ 271 (457)
++++++++|... + +++|.++|+++++++++|++++ ++.. +........|++ +++|.+++ .++|+++++
T Consensus 176 ~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~--t~sK~~~~G~riG~~~~~ 253 (379)
T TIGR00707 176 VEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDII--TLAKGLGGGVPIGATLAK 253 (379)
T ss_pred EEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCEE--EEcccccCCcccEEEEEc
Confidence 998888888653 3 8899999999999999999997 3321 111112245665 46797663 248999998
Q ss_pred cCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCccc
Q 040741 272 RRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYI 351 (457)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 351 (457)
++.++.+.....+. . ...++..+.++.++++.+.. ....++.+++.+++++.|.+ + +...........+
T Consensus 254 ~~~~~~~~~~~~~~------~-~~~~~~~~~aa~aaL~~~~~--~~~~~~~~~~~~~~~~~l~~-~-~~~~~~~~~~~~g 322 (379)
T TIGR00707 254 EEVAEAFTPGDHGS------T-FGGNPLACAAALAVLEVIEK--ERLLENVKEKGDYFKERLEE-L-GKNYPNKEVRGKG 322 (379)
T ss_pred HHHHhhhcCCCCCC------C-CCCCHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHH-H-HhhCCCCccccCc
Confidence 87666655432111 1 13466667777777776643 34667777788888877766 3 1111001111123
Q ss_pred ceEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Q 040741 352 GNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQ 429 (457)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~ 429 (457)
.++.+.++. +...+...| +||.+.++. .+++||+++..++++++++++++|+++
T Consensus 323 ~~~~~~~~~-~~~~~~~~l~~~Gv~v~~~~-----------------------~~~lRi~~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 323 LMLGIELEA-PCKDIVKKALEKGLLVNCAG-----------------------PKVLRFLPPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred eEEEEEecC-cHHHHHHHHHHCCcEEeeCC-----------------------CCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 444555542 345566556 688776531 168999999888999999999999875
No 257
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.90 E-value=2.9e-21 Score=206.91 Aligned_cols=291 Identities=13% Similarity=0.100 Sum_probs=218.6
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHH-HHhcCcEEE
Q 040741 96 GWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRH-LQQEGFEIT 174 (457)
Q Consensus 96 ~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~-~~~~G~~v~ 174 (457)
..+..+.+.++++++++++|++++++.++.++|.+.+.+++++.. .++++++|++++..|+++...++. ++..|++++
T Consensus 116 sQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~-~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~ 194 (954)
T PRK05367 116 SQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRV-SKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVV 194 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhh-ccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEE
Confidence 445568888999999999999999999999999999988887753 112248999999999999988764 467799999
Q ss_pred EEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEe
Q 040741 175 YLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSL 254 (457)
Q Consensus 175 ~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~ 254 (457)
.++.+.+ ++ ++++..+ +.+..|.+|.+.|+++|+++||++|+++++|+.+.......++.++|+|++++
T Consensus 195 ~~~~~~d----~~------~~~~~~v-lvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pge~GaDi~vg 263 (954)
T PRK05367 195 VGDAAKA----LD------HDDVFGV-LLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPPGEMGADIAVG 263 (954)
T ss_pred EecCccC----CC------cccEEEE-EEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCChhhcCCCEEEe
Confidence 9987642 11 2344444 44445679999999999999999999999999885555555778899999999
Q ss_pred ccccc-----cCCCCceEEEEecCCCccccccccCCc-----------------cccccccCCCChhHHHHHHHHHHH--
Q 040741 255 SGHKI-----YGPKGVGALYMRRRPRIRVEPLINGGG-----------------QERGIRSGTLPTPLIVGFGSACEI-- 310 (457)
Q Consensus 255 s~~K~-----~g~~G~G~l~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~t~~~~~~~al~~al~~-- 310 (457)
++||+ ||.+|.|++++++++..++.+.+.|+. ++.++..+|.|+....++.+.+..
T Consensus 264 s~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y 343 (954)
T PRK05367 264 SAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMY 343 (954)
T ss_pred eCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 99998 666679999999987777766655532 112455678777654444333322
Q ss_pred ---H-HHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHHhcc--cCeEecccCccCCC
Q 040741 311 ---A-KKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSA 384 (457)
Q Consensus 311 ---~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~ 384 (457)
+ ..+++++.++...++.++.+.|.+ +++.+..+ .+...+.+.+. .+..++...| +||.+..
T Consensus 344 ~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~--~G~~~~~~---~~f~~~~~~~~-~~~~~i~~~l~~~gi~~~~------- 410 (954)
T PRK05367 344 AVYHGPEGLKAIARRVHRLAAILAAGLRA--LGLEVVHD---SFFDTLTVEVG-GDAAAVLARALAAGINLRR------- 410 (954)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHh--cCcccCCC---CCCCeEEEeCC-CCHHHHHHHHHHCCceecc-------
Confidence 2 347999999999999999999977 67777543 22345555543 3556777666 5665521
Q ss_pred CCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHH
Q 040741 385 SLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTV 427 (457)
Q Consensus 385 ~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~ 427 (457)
...+.+|+++..++|++|||.+++++.
T Consensus 411 ----------------~~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 411 ----------------VDDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred ----------------ccCCEEEEEecccCCHHHHHHHHHHHc
Confidence 112689999999999999999999997
No 258
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.90 E-value=1.6e-21 Score=196.64 Aligned_cols=291 Identities=12% Similarity=0.056 Sum_probs=185.5
Q ss_pred CcEEEeCChHHHHHHHHHHhhh-hhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC--CCCCCCHHHHHHhcCC
Q 040741 119 KEIIFTSGATESNNVSIKGVMH-FYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG--ADGIVNLDELRAAIRP 195 (457)
Q Consensus 119 ~~i~~t~g~T~a~~~al~~~~~-~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~le~~i~~ 195 (457)
++|++|+|+++|+..++.++.. .+.++||+|++..+.|+.+...++.. ..|..++.++.+ .++.+|++++++++++
T Consensus 162 ~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~-g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~ 240 (527)
T PRK09275 162 FDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELP-RYDLEVVHINADEENEWQYPDSELEKLRDP 240 (527)
T ss_pred CeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHc-CCCeEEEEeecCcccCCCCCHHHHHhhcCC
Confidence 3799999999999999887310 01189999999999999998876655 123455555543 3467899999999999
Q ss_pred CceEEEEeccccccccccC---hHHHHHHHHh--cCCcEEEehhhhcCCCc-ccCC--CCcccEEEeccccccCCCC--c
Q 040741 196 DTGLISVMAVNNEIGVIQP---MEEIGQICKE--FKIPFHTDAAQALGKIP-VDVE--KWNVSLMSLSGHKIYGPKG--V 265 (457)
Q Consensus 196 ~t~li~i~~~~~~~G~~~~---l~~i~~l~~~--~~v~li~D~a~~~g~~~-~~~~--~~~~Di~~~s~~K~~g~~G--~ 265 (457)
++++|++++|+||||.+++ +++|+++|++ ++++||+|++|+--... ..+. .....+++.|++|.||.+| +
T Consensus 241 ~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~mtG~Rl 320 (527)
T PRK09275 241 SIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYFGATGWRL 320 (527)
T ss_pred CCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhccCcHhHH
Confidence 9999999999999999998 7778888965 49999999999732211 1111 1124588889999988776 8
Q ss_pred eEEEEecC-----CCcccc--------cccc----C--------------CccccccccCCCChhHHH-H---HHHHHHH
Q 040741 266 GALYMRRR-----PRIRVE--------PLIN----G--------------GGQERGIRSGTLPTPLIV-G---FGSACEI 310 (457)
Q Consensus 266 G~l~~~~~-----~~~~~~--------~~~~----~--------------~~~~~~~~~~t~~~~~~~-a---l~~al~~ 310 (457)
|+++++++ .+.++. ..+. . .........+.+.+.+.+ + +.++++.
T Consensus 321 G~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~ 400 (527)
T PRK09275 321 GVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDE 400 (527)
T ss_pred hhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhC
Confidence 99998875 222220 0000 0 000001122233333333 2 2222332
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcc-----------------ccchHHHhcc---
Q 040741 311 AKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAY-----------------VEGESLLMGL--- 370 (457)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~l--- 370 (457)
.....+...+.++++++.+.+.|.. .+... ++.. ..++.+.+.. .++.+++..|
T Consensus 401 ~~~~~~~~~~~~~~Rr~~l~~~Lg~---~~~~~-~p~g--~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e 474 (527)
T PRK09275 401 EDAYKKAMKDIIRRRYKALYEGLGL---PEPED-PNNA--AYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEE 474 (527)
T ss_pred chHHHHHHHHHHHHHHHHHHHHcCC---CCcCC-CCCe--eEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhc
Confidence 2233566777777777777666621 11111 1222 1122222221 1345555555
Q ss_pred cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHh
Q 040741 371 KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLRE 435 (457)
Q Consensus 371 ~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~ 435 (457)
.+|++.+|..+.. .++++||++.. .+++++..+.++|.+++++..+
T Consensus 475 ~gV~v~PG~~Fg~------------------~~~~vRis~a~-~~~~~~~~~~~rl~~~l~~y~~ 520 (527)
T PRK09275 475 TGVVLLPGGGFGG------------------PEWSVRVSLAN-LNEEDYAKIGKAIRKLLDEYYE 520 (527)
T ss_pred CCEEEeCchhhCC------------------CCCeEEEEEec-CCHHHHHHHHHHHHHHHHHHHH
Confidence 5899999975532 12789999974 3689999999999999987754
No 259
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.90 E-value=1.9e-21 Score=181.45 Aligned_cols=338 Identities=19% Similarity=0.247 Sum_probs=239.6
Q ss_pred CCCCCCCCHHHHHHHHHHHhhcc--CCCCCCccchhhhHHHHHHH-HHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhh
Q 040741 63 MQATTPVDPRVLDAMLPFYLSRY--GNPHSRTHLFGWESEVAVET-ARSQIADLIGASPKEIIFTSGATESNNVSIKGVM 139 (457)
Q Consensus 63 ~~~~~~~~~~v~~a~~~~~~~~~--~~p~~~~~~~~~~~~~~~~~-~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~ 139 (457)
.++-+..++.|++|+...+++.| |.|+.|-| .|....+.++. +.++..++||++..++.-.| |+.||..++.++.
T Consensus 32 IASEN~~S~aV~~A~gS~ltnKYAEGyPgkRyY-gGce~VD~vE~laierak~LFga~~anVQPhS-Gs~AN~av~~All 109 (413)
T COG0112 32 IASENFTSPAVMEAQGSDLTNKYAEGYPGKRYY-GGCEYVDEVEELAIERAKKLFGAEYANVQPHS-GSQANQAVYLALL 109 (413)
T ss_pred eeccccCCHHHHHHHhhhhhhccccCCCCcccc-CCCeeHHHHHHHHHHHHHHHhCCCccccCCCC-chHHHHHHHHHHc
Confidence 34566889999999999999877 57776444 34444455555 78888999999877776665 6778999999999
Q ss_pred hhhcCCCCEEEEcCCCCcchHHHHHHHHhcC--cEEEEEeCC-CCCCCCHHHHHHhcC-CCceEEEEeccccccccccCh
Q 040741 140 HFYKDKKRHVITTQTEHKCVLDSCRHLQQEG--FEITYLPVG-ADGIVNLDELRAAIR-PDTGLISVMAVNNEIGVIQPM 215 (457)
Q Consensus 140 ~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G--~~v~~v~~~-~~~~~d~~~le~~i~-~~t~li~i~~~~~~~G~~~~l 215 (457)
+|||.|+-.+..|.+.+.........| ++++..+++ +++.+|.|++++.+. .++++|+.-.- -+-...|+
T Consensus 110 ----~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii~G~S--aY~r~id~ 183 (413)
T COG0112 110 ----QPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGGS--AYSRPIDF 183 (413)
T ss_pred ----CCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHhCCCEEEECcc--ccccccCH
Confidence 999999988888777665431111112 567777888 668999999999775 57888877443 34467889
Q ss_pred HHHHHHHHhcCCcEEEehhhhcCC-----CcccCCCCcccEEEecccc-ccCCCCceEEEEec-CCCccccccccCCccc
Q 040741 216 EEIGQICKEFKIPFHTDAAQALGK-----IPVDVEKWNVSLMSLSGHK-IYGPKGVGALYMRR-RPRIRVEPLINGGGQE 288 (457)
Q Consensus 216 ~~i~~l~~~~~v~li~D~a~~~g~-----~~~~~~~~~~Di~~~s~~K-~~g~~G~G~l~~~~-~~~~~~~~~~~~~~~~ 288 (457)
++++++|++.|.++++|.||-.|- .+-++. .+|+++.|.|| +.||.| |+++.++ ++.+++.....-+.+
T Consensus 184 ~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~--~AdvVTtTTHKTlrGPrG-G~Il~~~eel~kkin~aVFPg~q- 259 (413)
T COG0112 184 KRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLP--HADVVTTTTHKTLRGPRG-GIILTNDEELAKKINSAVFPGLQ- 259 (413)
T ss_pred HHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCC--ccceEeCCcccCCCCCCc-eEEEeccHHHHHHhhhhcCCccC-
Confidence 999999999999999999996542 232232 38999999999 889997 9999886 455555543322211
Q ss_pred cccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEc--cccchH
Q 040741 289 RGIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFA--YVEGES 365 (457)
Q Consensus 289 ~~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 365 (457)
|.|-...+++...|++...+ +++...+++.++++.+.+.|.+ .|+.+++.-.. ...+.+.+. +.++.+
T Consensus 260 -----ggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~--~G~~vvsGgTd--nHl~lVDl~~~~~~Gk~ 330 (413)
T COG0112 260 -----GGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKE--RGFKVVSGGTD--NHLVLVDLRSKGLTGKK 330 (413)
T ss_pred -----CChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHH--cCCeEecCCcc--ceEEEEEcccCCCCHHH
Confidence 34555667777777777665 5889999999999999999999 68888864333 333444443 445666
Q ss_pred HHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCC----CHHHHHHHHHHHHHHHHHHH
Q 040741 366 LLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFT----TEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 366 ~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~----t~edid~~~~~l~~~~~~~~ 434 (457)
....| .||.+.-.....-. ........|||+....+ .++|++++.+.|.++++..+
T Consensus 331 ae~~L~~~~It~NKN~iP~D~-------------~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~~ 392 (413)
T COG0112 331 AEAALERAGITVNKNAIPFDP-------------ESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGLK 392 (413)
T ss_pred HHHHHHHcCEeeccCCCCCCC-------------CCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhccc
Confidence 65566 36655443221110 11234578999976654 47899999999888887655
No 260
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.89 E-value=2.3e-21 Score=193.33 Aligned_cols=322 Identities=15% Similarity=0.072 Sum_probs=203.9
Q ss_pred CcEEecCCCC---C-CCC--HHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhC------CCCCcE--E
Q 040741 57 RPLYLDMQAT---T-PVD--PRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIG------ASPKEI--I 122 (457)
Q Consensus 57 ~~i~l~~~~~---~-~~~--~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g------~~~~~i--~ 122 (457)
+.|.|..+.+ . ..| +.+.+++.+..... . . .+|.......++|+.+++++. ++++++ +
T Consensus 27 ~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~----~--~--~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~ 98 (396)
T PRK09257 27 DKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETE----T--T--KNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATV 98 (396)
T ss_pred CcEecceeeEECCCCCEeccHHHHHHHHHhcccc----c--C--CCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEE
Confidence 4566666532 1 223 67777777665321 0 0 112222345677777777652 256666 9
Q ss_pred EeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeC-C-CCCCCCHHHHHHhcC---CCc
Q 040741 123 FTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPV-G-ADGIVNLDELRAAIR---PDT 197 (457)
Q Consensus 123 ~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~-~-~~~~~d~~~le~~i~---~~t 197 (457)
+|+|+++|+.+++..+... ++||.|++.++.|+.+...++.. |++++.++. + +++.+|+++++++++ +++
T Consensus 99 iT~Ga~~al~~~~~~l~~~--~pGd~Vlv~~P~y~~~~~~~~~~---g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~ 173 (396)
T PRK09257 99 QTPGGTGALRVGADFLKRA--FPDAKVWVSDPTWPNHRAIFEAA---GLEVKTYPYYDAATKGLDFDAMLADLSQAPAGD 173 (396)
T ss_pred ecCCccHHHHHHHHHHHHh--CCCCeEEECCCCcccHHHHHHHc---CCcEEEEeccccccCccCHHHHHHHHHhCCCCC
Confidence 9999999999998765311 79999999999999999888776 999999987 2 346799999999875 446
Q ss_pred eEEEEeccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCCCc-----c---cCCC-CcccEEEeccccccCCCC-
Q 040741 198 GLISVMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKIP-----V---DVEK-WNVSLMSLSGHKIYGPKG- 264 (457)
Q Consensus 198 ~li~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~~-----~---~~~~-~~~Di~~~s~~K~~g~~G- 264 (457)
.+++++++|||||.+.+ +++|+++|++||+++++|+++.--... . .+.. ...-+++.|++|.++++|
T Consensus 174 ~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~Gl 253 (396)
T PRK09257 174 VVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGE 253 (396)
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccc
Confidence 78888999999999988 677889999999999999998632211 0 0111 123477899999888765
Q ss_pred -ceEEEE--ec-CCCccccccccCCccccccccCCCChhHHHHHHHHHHH------HHHhhHHHHHHHHHHHHHHHHHHh
Q 040741 265 -VGALYM--RR-RPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEI------AKKEMDYDHKRITALHDRLLNGIK 334 (457)
Q Consensus 265 -~G~l~~--~~-~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~------~~~~~~~~~~~~~~~~~~l~~~l~ 334 (457)
+||+++ .+ +...++...+... .......++.....++...+.. ..+.+++.+++++++++.+.+.|+
T Consensus 254 RiG~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~ 330 (396)
T PRK09257 254 RVGALSVVAEDAEEADRVLSQLKAT---IRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALK 330 (396)
T ss_pred cceeEEEEeCCHHHHHHHHHHHHHH---hhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899984 21 2111221111000 0001123333333333333322 133467788889999999999998
Q ss_pred hcCC---CeEEeCCCCCcccceEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEe
Q 040741 335 EKLD---GVVVNGSMERRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFG 409 (457)
Q Consensus 335 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~ 409 (457)
+ .. ++.+..+ .+.+.+++. .+.+.+...+ .||.+.+. + ||+
T Consensus 331 ~-~~~~~~~~~~~p-----~gg~~~w~~-l~~~~~~~l~~~~~V~~~p~-------------------------~--ri~ 376 (396)
T PRK09257 331 A-KGPSRDFDFIAR-----QRGMFSYSG-LTPEQVDRLREEFGVYAVGS-------------------------G--RIN 376 (396)
T ss_pred h-cCCCCCcccccc-----cceEEEecC-CCHHHHHHHHHcCCEEEcCC-------------------------C--eEE
Confidence 8 42 2444332 122233443 3323322222 47766420 2 899
Q ss_pred cCCCCCHHHHHHHHHHHHHH
Q 040741 410 IGRFTTEAEVDRAIELTVKQ 429 (457)
Q Consensus 410 ~~~~~t~edid~~~~~l~~~ 429 (457)
++. .++++|++++++|+++
T Consensus 377 ~~~-~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 377 VAG-LNESNIDYVAEAIAAV 395 (396)
T ss_pred Eee-CCHHHHHHHHHHHHhh
Confidence 865 5689999999999875
No 261
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.89 E-value=5e-21 Score=184.50 Aligned_cols=311 Identities=15% Similarity=0.150 Sum_probs=223.7
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHH-HhcC
Q 040741 92 THLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHL-QQEG 170 (457)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~-~~~G 170 (457)
.+.|++...+....+++.++++-|.+. ++.+++|..|+..++.++. ++||+|++++..|.+...-+... .+.|
T Consensus 54 ~~~Y~R~~nPT~~~lE~~~a~LEg~~~--~~afsSGmaAI~~~~l~ll----~~GD~vl~~~~~YG~t~~~~~~~l~~~g 127 (396)
T COG0626 54 GYDYSRTGNPTRDALEEALAELEGGED--AFAFSSGMAAISTALLALL----KAGDHVLLPDDLYGGTYRLFEKILQKFG 127 (396)
T ss_pred CcccccCCCccHHHHHHHHHHhhCCCc--EEEecCcHHHHHHHHHHhc----CCCCEEEecCCccchHHHHHHHHHHhcC
Confidence 344555556788899999999998765 8999999999999999998 89999999999888887776644 6779
Q ss_pred cEEEEEeCCCCCCCCHHHHHHhcC-CCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcc
Q 040741 171 FEITYLPVGADGIVNLDELRAAIR-PDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNV 249 (457)
Q Consensus 171 ~~v~~v~~~~~~~~d~~~le~~i~-~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~ 249 (457)
+++.+++.. |.+++++++. ++|++|+++.|.||+-.+.|+++|+++|+++|+++++|.+.+.+..- ..-+.|+
T Consensus 128 i~~~~~d~~-----~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q-~PL~~Ga 201 (396)
T COG0626 128 VEVTFVDPG-----DDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQ-RPLELGA 201 (396)
T ss_pred eEEEEECCC-----ChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCccccccc-ChhhcCC
Confidence 999999865 5666777776 59999999999999999999999999999999999999999876442 2334579
Q ss_pred cEEEeccccccCCCC---ceEEEEecCCCcc-ccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 040741 250 SLMSLSGHKIYGPKG---VGALYMRRRPRIR-VEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITAL 325 (457)
Q Consensus 250 Di~~~s~~K~~g~~G---~G~l~~~~~~~~~-~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~ 325 (457)
|+++-|.+|++|.-. .|+++.+++.+.. +...... .....+++....-+...+ ..+.-++++..++
T Consensus 202 DIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~------~~G~~l~p~dA~l~lRGl----kTL~~Rm~~~~~n 271 (396)
T COG0626 202 DIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRA------NTGAVLSPFDAWLLLRGL----RTLALRMERHNEN 271 (396)
T ss_pred CEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHh------hcCCCCCHHHHHHHHhcc----chHHHHHHHHHHH
Confidence 999999999665332 4656655543322 2111110 011133333333222222 3467888899999
Q ss_pred HHHHHHHHhhcCCCeEEeCCCC--------------CcccceEEEEEcc-ccchHHHhccc--CeEecccCccCCCC---
Q 040741 326 HDRLLNGIKEKLDGVVVNGSME--------------RRYIGNLNLSFAY-VEGESLLMGLK--EVAVSSGSACTSAS--- 385 (457)
Q Consensus 326 ~~~l~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~-~~~~~~~~~l~--~i~~~~g~~~~~~~--- 385 (457)
+..+.+.|++ .|.++-+-.|. ...++++.|.+.+ ....+++..|+ .++.+-|...+...
T Consensus 272 A~~IA~~L~~-~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~~~L~l~~~a~SlGgveSLi~~pa 350 (396)
T COG0626 272 ALKIAEFLAD-HPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLDSLKLFKLAESLGGVESLISHPA 350 (396)
T ss_pred HHHHHHHHhc-CCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHHHhCCccEEeccCCCccccccccc
Confidence 9999999999 77775332221 1267888888875 44556777774 55666676543222
Q ss_pred -CC----hhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 386 -LE----PSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 386 -~~----~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
+. |.-.....|+.+ +.||++++. ||++.+++.|+++++.+
T Consensus 351 ~~th~~~~~~~r~~~Gi~~----~LvRlSVGl----Ed~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 351 TMTHASIPLEERAKAGITD----GLVRLSVGL----EDVEDLIADLEQALAKA 395 (396)
T ss_pred ccCcccCCHhHHHhcCCCC----CeEEEEecC----CCHHHHHHHHHHHHHhh
Confidence 21 122445677776 899999997 89999999999998764
No 262
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.89 E-value=3.2e-21 Score=187.85 Aligned_cols=272 Identities=16% Similarity=0.085 Sum_probs=190.0
Q ss_pred HHHHHHHHHHhCCC-CCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCC
Q 040741 104 ETARSQIADLIGAS-PKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADG 182 (457)
Q Consensus 104 ~~~~~~la~~~g~~-~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~ 182 (457)
.++++.+++++|++ ++++++|+|+++++.++.. +. ++|+ |++..+.|+.+...++.. |.+++.++.+.
T Consensus 56 ~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~~-~~----~~g~-v~v~~P~y~~y~~~~~~~---g~~~~~v~~~~-- 124 (339)
T PRK06959 56 DGLAACAARYYGAPDAAHVLPVAGSQAAIRALPA-LL----PRGR-VGIAPLAYSEYAPAFARH---GHRVVPLDEAA-- 124 (339)
T ss_pred HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHHH-hc----CCCe-EEEcCCCcHHHHHHHHHC---CCEEEeecccc--
Confidence 78999999999996 4799999999999986543 44 5676 888889998888877666 99998887652
Q ss_pred CCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHH---HHhcCCcEEEehhhhcCCCccc---CCCCcccEEEecc
Q 040741 183 IVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQI---CKEFKIPFHTDAAQALGKIPVD---VEKWNVSLMSLSG 256 (457)
Q Consensus 183 ~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l---~~~~~v~li~D~a~~~g~~~~~---~~~~~~Di~~~s~ 256 (457)
+. +.+.++++++++||||||.+.+.+++.++ |++++.++++|+++.-...... ......-+++.|+
T Consensus 125 ----~~----~~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~Sf 196 (339)
T PRK06959 125 ----DT----LPAALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSV 196 (339)
T ss_pred ----hh----ccccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEecC
Confidence 22 23345689999999999999996665554 6678999999999874321111 1111223788899
Q ss_pred ccccCCCC--ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHh
Q 040741 257 HKIYGPKG--VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIK 334 (457)
Q Consensus 257 ~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~ 334 (457)
+|.||.+| +|+++++++.++++......+ ..+.....++.++++. .+..++..+++++.++++.+.|+
T Consensus 197 SK~~gl~GlRiGy~v~~~~li~~l~~~~~~~---------~vs~~~q~a~~~~L~~-~~~~~~~~~~~~~~r~~l~~~L~ 266 (339)
T PRK06959 197 GKFFGLAGVRAGFVLAAPALLAALRDALGAW---------TVSGPARHAVRAAFAD-AAWQAAMRERLAADGARLAALLR 266 (339)
T ss_pred hhhcCCcchheEEEecCHHHHHHHHHhcCCC---------CCcHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888666 899999887766665443221 2344444444445532 22356777888899999999999
Q ss_pred hcCCCeEEeCCCCCcccceEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCC
Q 040741 335 EKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGR 412 (457)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~ 412 (457)
+ + ++.+.. .+.++.+.++ +...+...| +||.++. |.. .++|||+++.
T Consensus 267 ~-~-g~~~~~-----~~~f~~~~~~--~~~~l~~~l~~~GI~vr~---~~~-------------------~~~lRisi~~ 315 (339)
T PRK06959 267 A-H-GFAVHA-----TPLFSWTDDP--RAAALHAALARRGIWTRY---FAP-------------------PPSVRFGLPA 315 (339)
T ss_pred H-C-CCCccC-----cceEEEEeCC--CHHHHHHHHHhCCeEEEE---CCC-------------------CCeEEEECCC
Confidence 8 4 555432 1233333332 445666666 6888852 211 1689999853
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhcC
Q 040741 413 FTTEAEVDRAIELTVKQVEKLREMS 437 (457)
Q Consensus 413 ~~t~edid~~~~~l~~~~~~~~~~~ 437 (457)
+.+|.++++++|+++++.+...|
T Consensus 316 --~~~e~~~l~~al~~~~~~~~~~~ 338 (339)
T PRK06959 316 --DEAEWQRLEDALAECVPTLAAAS 338 (339)
T ss_pred --CHHHHHHHHHHHHHHHHHHhhcc
Confidence 57899999999999998887654
No 263
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.89 E-value=1.5e-20 Score=187.86 Aligned_cols=328 Identities=16% Similarity=0.199 Sum_probs=209.4
Q ss_pred CCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHH
Q 040741 56 GRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATE 129 (457)
Q Consensus 56 ~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~ 129 (457)
.+.-|+|+.+. +..+|++.+++.+.+....... . . + ..+...++++.|+++.+. +.++|++||++
T Consensus 38 dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~---~-~--~-~~~~~~~l~~~l~~~~~~--~~~~~~~sGse 108 (403)
T PRK05093 38 QGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHIS---N-V--F-TNEPALRLAKKLIDATFA--ERVFFANSGAE 108 (403)
T ss_pred CCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCccc---C-c--c-CCHHHHHHHHHHHhhCCC--CEEEEeCchHH
Confidence 44557887553 3578999999999987532111 1 0 1 113456899999998765 35999999999
Q ss_pred HHHHHHHHhhhhhc-----CCCCEEEEcCCCCcchHHHHHHHHh----cC-----cEEEEEeCCCCCCCCHHHHHHhcCC
Q 040741 130 SNNVSIKGVMHFYK-----DKKRHVITTQTEHKCVLDSCRHLQQ----EG-----FEITYLPVGADGIVNLDELRAAIRP 195 (457)
Q Consensus 130 a~~~al~~~~~~~~-----~~g~~vi~~~~~h~~~~~~~~~~~~----~G-----~~v~~v~~~~~~~~d~~~le~~i~~ 195 (457)
|+..+++....+.. ++...|.+....|.....+...... .| .++..++.+ |++++++.+.+
T Consensus 109 A~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~ 183 (403)
T PRK05093 109 ANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFN-----DLAAVKAVIDD 183 (403)
T ss_pred HHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCC-----CHHHHHHHhcC
Confidence 99999997654431 2334455666678777655443210 01 123333333 89999999988
Q ss_pred CceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCC--ccc--CCCCcccEEEeccccccCC-CCc
Q 040741 196 DTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKI--PVD--VEKWNVSLMSLSGHKIYGP-KGV 265 (457)
Q Consensus 196 ~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~--~~~--~~~~~~Di~~~s~~K~~g~-~G~ 265 (457)
++++|+++.++++.|...| +++|.++|++||+++|+|++|+ ++.. ... .....+|+. |++|.+|+ -.+
T Consensus 184 ~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~--s~sK~l~~G~ri 261 (403)
T PRK05093 184 HTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDIL--TSAKALGGGFPI 261 (403)
T ss_pred CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCCEE--EecccccCCcce
Confidence 8999999976655565544 8999999999999999999987 2211 111 112246755 55696652 239
Q ss_pred eEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCC-CeEEeC
Q 040741 266 GALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLD-GVVVNG 344 (457)
Q Consensus 266 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~ 344 (457)
|+++++++..+.+.....+ ... ..++..++++.++++.+.. ....++++++.+++.+.|++ +. .+.+..
T Consensus 262 g~vv~~~~i~~~l~~~~~~------~t~-~~~~~~~~aa~a~L~~~~~--~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~ 331 (403)
T PRK05093 262 GAMLTTAEIASHFKVGTHG------STY-GGNPLACAVAEAVFDIINT--PEVLEGVKARRQRFVDGLQK-INQKYGVFS 331 (403)
T ss_pred EEEEEcHHHHhhcCCCCCC------CCC-CCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHH-HHhhCCCeE
Confidence 9999988766665543221 112 3455566666677777644 45567788888888888877 31 111111
Q ss_pred CCCCcccceEEEEEccc---cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHH
Q 040741 345 SMERRYIGNLNLSFAYV---EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEV 419 (457)
Q Consensus 345 ~~~~~~~~~~~~~~~~~---~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edi 419 (457)
.. ...+.++.+.+... ...++...+ +||.+.++. .+.+||+++..+++++|
T Consensus 332 ~~-~~~G~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~g-----------------------~~~lRl~~~~~~~~~~i 387 (403)
T PRK05093 332 EI-RGMGLLIGAELKPQYKGRARDFLNAAAEEGVMVLVAG-----------------------PDVLRFAPSLVIEEADI 387 (403)
T ss_pred eE-eeCceEEEEEecCcchhHHHHHHHHHHHCCeEEecCC-----------------------CCEEEEeCCCCCCHHHH
Confidence 10 01133333444211 234555554 577765321 26899999999899999
Q ss_pred HHHHHHHHHHHHHH
Q 040741 420 DRAIELTVKQVEKL 433 (457)
Q Consensus 420 d~~~~~l~~~~~~~ 433 (457)
++++++|+++++++
T Consensus 388 ~~~~~~l~~~l~~~ 401 (403)
T PRK05093 388 DEGLARFEKAVAKV 401 (403)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998753
No 264
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.89 E-value=8.7e-21 Score=185.71 Aligned_cols=290 Identities=18% Similarity=0.259 Sum_probs=194.6
Q ss_pred CcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCC-------CcEEEeCChHH
Q 040741 57 RPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASP-------KEIIFTSGATE 129 (457)
Q Consensus 57 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~-------~~i~~t~g~T~ 129 (457)
++-|+.+-.+++.+..++..+.....+. |. ..+..+....+.-.++.+++++++|.+. ...+||+|||+
T Consensus 39 ~P~~~~~~~~~~~~~~i~~~~l~~~~n~--n~--~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~ 114 (373)
T PF00282_consen 39 HPRFFGFVPGGPSPASILADLLASALNQ--NG--FTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTE 114 (373)
T ss_dssp STTBESSSHT--CHHHHHHHHHHHHHT---BT--TSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHH
T ss_pred ChhHhhhccCCccHHHHHHHHHHhhhcc--cc--cccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchH
Confidence 3457777666666666655554443322 21 1333445556777789999999999971 34899999999
Q ss_pred HHHHHHHHhhhhhcC----------CCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC---C
Q 040741 130 SNNVSIKGVMHFYKD----------KKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP---D 196 (457)
Q Consensus 130 a~~~al~~~~~~~~~----------~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~---~ 196 (457)
|+..++.+.+..+.. ++..|++++..|.++..++..+ |+.++.||+++++.+|+++|+++|.. +
T Consensus 115 anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~l---Glg~~~I~~~~~~~md~~~L~~~l~~~~~~ 191 (373)
T PF00282_consen 115 ANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARIL---GLGVRKIPTDEDGRMDIEALEKALEKDIAN 191 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHT---TSEEEEE-BBTTSSB-HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhccee---eeEEEEecCCcchhhhHHHhhhhhcccccc
Confidence 999999887644321 2346788888999999999998 99999999999999999999998853 2
Q ss_pred ---ceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCc------ccCCCCcccEEEeccccc-cCCCCce
Q 040741 197 ---TGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIP------VDVEKWNVSLMSLSGHKI-YGPKGVG 266 (457)
Q Consensus 197 ---t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~------~~~~~~~~Di~~~s~~K~-~g~~G~G 266 (457)
+-+|+.+...+.+|.+.|+++|+++|+++++++|+|+|++..... ....-..+|.+++++||+ +.|.++|
T Consensus 192 g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~ 271 (373)
T PF00282_consen 192 GKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCG 271 (373)
T ss_dssp TEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-E
T ss_pred cccceeeeccCCCcccccccCHHHHhhhccccceeeeecccccccccccccccccccccccccccccchhhhhcCCccce
Confidence 336778888889999999999999999999999999999864331 111112589999999995 4588999
Q ss_pred EEEEecCCCc-cc---c-ccccCCc----ccc-cccc---CCCChhHHHHHHHHHH-HHHHhhHHHHHHHHHHHHHHHHH
Q 040741 267 ALYMRRRPRI-RV---E-PLINGGG----QER-GIRS---GTLPTPLIVGFGSACE-IAKKEMDYDHKRITALHDRLLNG 332 (457)
Q Consensus 267 ~l~~~~~~~~-~~---~-~~~~~~~----~~~-~~~~---~t~~~~~~~al~~al~-~~~~~~~~~~~~~~~~~~~l~~~ 332 (457)
+++++++..- .. . +++.... ... .... ++- -.....+-.+++ +..+++.+..++..++++++.+.
T Consensus 272 ~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~ 350 (373)
T PF00282_consen 272 VLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADR 350 (373)
T ss_dssp EEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEeecccchHHHhccChhhhcccccccccccccccccccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999986321 11 1 1111000 000 0000 111 122233333444 34567999999999999999999
Q ss_pred HhhcCCCeEEeCCCCCcccceEEEEE
Q 040741 333 IKEKLDGVVVNGSMERRYIGNLNLSF 358 (457)
Q Consensus 333 l~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (457)
|++ .+++++..++. .+++.|++
T Consensus 351 l~~-~~~~el~~~~~---~~~vcFr~ 372 (373)
T PF00282_consen 351 LRK-DPRFELVNEPD---LNIVCFRY 372 (373)
T ss_dssp HHT-STTEEESSTTS---SSEEEEEE
T ss_pred HHh-CCCEEEEcCCC---ceEEEEEe
Confidence 999 89999987543 55566654
No 265
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.89 E-value=6.3e-21 Score=192.12 Aligned_cols=344 Identities=13% Similarity=0.072 Sum_probs=209.6
Q ss_pred CCcEEecCCCCCCCCHHHHHHHHHHHhh-ccCCCCCCccchhhhHHHHHHHHH-HHHHHHhC---CCCC--cEEEeCChH
Q 040741 56 GRPLYLDMQATTPVDPRVLDAMLPFYLS-RYGNPHSRTHLFGWESEVAVETAR-SQIADLIG---ASPK--EIIFTSGAT 128 (457)
Q Consensus 56 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~-~~la~~~g---~~~~--~i~~t~g~T 128 (457)
.+.+.|..+.+...+++.++++.+.... .|..|.+ ..+..+++. +.+.+..+ .+++ ++++|+|++
T Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~Y~~p~g--------~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat 165 (521)
T TIGR03801 94 RDIISYVIDQLGFDPDAFLYEMCDGIIGDNYPVPDR--------MLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGT 165 (521)
T ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHhhcCCCCCCCC--------CHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHH
Confidence 3446666666664466667777776432 1111111 112333322 33344333 2333 799999999
Q ss_pred HHHHHHHHHhhh-hhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC--C-----CCCCHHHHHHhcCCCceEE
Q 040741 129 ESNNVSIKGVMH-FYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA--D-----GIVNLDELRAAIRPDTGLI 200 (457)
Q Consensus 129 ~a~~~al~~~~~-~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~--~-----~~~d~~~le~~i~~~t~li 200 (457)
+|+..++.++.. ...++||+|++..+.|+.+...+... ..|.+++.++.+. + +.+|++++++++++++++|
T Consensus 166 ~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~-~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai 244 (521)
T TIGR03801 166 AAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELP-RYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKAL 244 (521)
T ss_pred HHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHh-cCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCcEE
Confidence 999998887310 01189999999999999988876653 2367777777652 1 5689999999999999999
Q ss_pred EEeccccccccccC---hHHHHHHHHhc--CCcEEEehhhhcCCCc-ccCCC--CcccEEEeccccccCCCC--ceEEEE
Q 040741 201 SVMAVNNEIGVIQP---MEEIGQICKEF--KIPFHTDAAQALGKIP-VDVEK--WNVSLMSLSGHKIYGPKG--VGALYM 270 (457)
Q Consensus 201 ~i~~~~~~~G~~~~---l~~i~~l~~~~--~v~li~D~a~~~g~~~-~~~~~--~~~Di~~~s~~K~~g~~G--~G~l~~ 270 (457)
++++|+||||.+.+ +++|+++|++| +++||+|++++--... ..+.. ...-+++.|++|.||.+| +|++++
T Consensus 245 ~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~fg~~G~RlG~i~~ 324 (521)
T TIGR03801 245 FVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYFGATGWRLGTIAL 324 (521)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhccCchhhhhhhhc
Confidence 99999999999998 77788889987 9999999999732211 11111 123578889999888766 999998
Q ss_pred ecC-----CCccc--------cccccC------------------CccccccccCCCChhHHH--H---HHHHHHHHHHh
Q 040741 271 RRR-----PRIRV--------EPLING------------------GGQERGIRSGTLPTPLIV--G---FGSACEIAKKE 314 (457)
Q Consensus 271 ~~~-----~~~~~--------~~~~~~------------------~~~~~~~~~~t~~~~~~~--a---l~~al~~~~~~ 314 (457)
+++ ++..+ ...+.. .........|. +.++.. + +.++++.....
T Consensus 325 ~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~-s~p~Q~q~al~a~~all~~~~~y 403 (521)
T TIGR03801 325 HKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGL-STPQQVQMALFSLFALMDKENAY 403 (521)
T ss_pred CchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCC-CcHHHHHHHHHHHHHHhccchhH
Confidence 764 11111 000000 00000112222 333322 2 22222222223
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcCCCeEEe-CCCCCcccceEEEEEccc-----------------cchHHHhcc---cCe
Q 040741 315 MDYDHKRITALHDRLLNGIKEKLDGVVVN-GSMERRYIGNLNLSFAYV-----------------EGESLLMGL---KEV 373 (457)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~l---~~i 373 (457)
.+...+.++++++.+.+.| ++.+. .++.. ..++.+.+... ++.+++..| .||
T Consensus 404 ~~~~~~~~~~R~~~l~~~L-----g~~~~~~~~~g--~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV 476 (521)
T TIGR03801 404 KAETKDICRRREKLLFRGL-----GLPLQEDPNDV--AYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGI 476 (521)
T ss_pred HHHHHHHHHHHHHHHHHhc-----CCCCcCCCCCe--EEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCE
Confidence 5666667777777776665 22211 11221 22233333311 344566656 589
Q ss_pred EecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHh
Q 040741 374 AVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLRE 435 (457)
Q Consensus 374 ~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~ 435 (457)
.+.+|..+.. . ++++||++.. .++++++++.++|++++++..+
T Consensus 477 ~v~PG~~Fg~--------------~----~~~vRisla~-l~~~~~~~~~~rl~~~~~~~~~ 519 (521)
T TIGR03801 477 VLLPGGGFGG--------------P----EWSVRVSLAN-LNEYDYAEIGRAIRKILDEYYE 519 (521)
T ss_pred EEeCchhcCC--------------C----CCeEEEEecC-CCHHHHHHHHHHHHHHHHHHHH
Confidence 9999975432 1 2689999964 4688999999999999987653
No 266
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.89 E-value=4.9e-21 Score=191.39 Aligned_cols=328 Identities=14% Similarity=0.032 Sum_probs=204.6
Q ss_pred CcEEecCCCC--CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhC------CCCCcEE--EeCC
Q 040741 57 RPLYLDMQAT--TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIG------ASPKEII--FTSG 126 (457)
Q Consensus 57 ~~i~l~~~~~--~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g------~~~~~i~--~t~g 126 (457)
+.+.|..+.+ ...+..+.+++.+.+........ .. +|.......++|+.+++++. +++++++ .|.|
T Consensus 30 ~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~--~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G 105 (404)
T PTZ00376 30 SKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNL--DK--EYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALS 105 (404)
T ss_pred ccEecccceeECCCCCEehhhHHHHHHHHhccccC--CC--CCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccC
Confidence 4466665543 13333445555555432211100 11 22222456678888888652 3566787 4899
Q ss_pred hHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC--CCCCCCHHHHHHhcC---CCceEEE
Q 040741 127 ATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG--ADGIVNLDELRAAIR---PDTGLIS 201 (457)
Q Consensus 127 ~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~le~~i~---~~t~li~ 201 (457)
++.|+.+++..+..+ .++||.|++.++.|+.+...++.+ |++++.++.. .++.+|++.++++++ +++++++
T Consensus 106 ~~~al~~~~~~l~~~-~~~Gd~Vlv~~P~y~~~~~~~~~~---G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~ 181 (404)
T PTZ00376 106 GTGALRLGFEFLKRF-LPAGTTVYVSNPTWPNHVNIFKSA---GLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLL 181 (404)
T ss_pred cchHHHHHHHHHHHh-cCCCCEEEEcCCCchhHHHHHHHc---CCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEE
Confidence 999998887643211 189999999999999998887776 9999999983 346789999999884 4567888
Q ss_pred EeccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCCCc---------ccCCC-CcccEEEeccccccCCCC--ce
Q 040741 202 VMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKIP---------VDVEK-WNVSLMSLSGHKIYGPKG--VG 266 (457)
Q Consensus 202 i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~~---------~~~~~-~~~Di~~~s~~K~~g~~G--~G 266 (457)
++++|||||.+.+ +++|+++|++|+++|++|+++.--... ..... ...-+++.|+||.+|.+| +|
T Consensus 182 ~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG 261 (404)
T PTZ00376 182 HACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIG 261 (404)
T ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccc
Confidence 9999999999988 667888899999999999998632111 01111 113478889999888555 99
Q ss_pred EEE---EecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHH------HHhhHHHHHHHHHHHHHHHHHHhhcC
Q 040741 267 ALY---MRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIA------KKEMDYDHKRITALHDRLLNGIKEKL 337 (457)
Q Consensus 267 ~l~---~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~------~~~~~~~~~~~~~~~~~l~~~l~~~~ 337 (457)
|++ .+++..+++...+... .....+..+.....++..+++.. .+.+.+..++++++++.+.+.|.+ +
T Consensus 262 ~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~ 337 (404)
T PTZ00376 262 ALHIVCANKEEAANVLSQLKLI---IRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKA-L 337 (404)
T ss_pred eEEEEeCCHHHHHHHHHHHHHH---HhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c
Confidence 984 3443322222111000 00011233433444444444321 122456667888899999999988 4
Q ss_pred C---CeEEeCCCCCcccceEEEEEccccchHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecC
Q 040741 338 D---GVVVNGSMERRYIGNLNLSFAYVEGESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIG 411 (457)
Q Consensus 338 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~ 411 (457)
. ++.+..+ .+.+.+++. . ..++...| .||.+.+| + ||+++
T Consensus 338 ~~~~~~~~~~p-----~gg~f~~~~-~-~~~~~~~L~~~~~v~v~p~-------------------------~--Ris~~ 383 (404)
T PTZ00376 338 GSPGDWEHIIN-----QIGMFSFTG-L-TKEQVERLIEKYHIYLLDN-------------------------G--RISVA 383 (404)
T ss_pred CCCCccccccc-----CceEEEecC-C-CHHHHHHHHHhCCEeecCC-------------------------C--eEEEe
Confidence 2 1222222 122233333 2 23455555 37776543 2 89986
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q 040741 412 RFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 412 ~~~t~edid~~~~~l~~~~~ 431 (457)
. .+.+++++++++|++++.
T Consensus 384 ~-~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 384 G-LTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred c-cCHHhHHHHHHHHHHHHh
Confidence 4 578999999999998875
No 267
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.89 E-value=7.6e-20 Score=182.69 Aligned_cols=327 Identities=16% Similarity=0.184 Sum_probs=204.7
Q ss_pred CcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHH
Q 040741 57 RPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATES 130 (457)
Q Consensus 57 ~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a 130 (457)
+.-|+|+.+. ++-.|++.+++.+.+...... . .. ...+...++.++++++.+. ++++|++||++|
T Consensus 38 g~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~-~---~~---~~~~~~~~la~~l~~~~~~--~~v~~~~gg~eA 108 (396)
T PRK02627 38 GKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHT-S---NL---YYIEPQEELAEKLVELSGM--DKVFFCNSGAEA 108 (396)
T ss_pred CCEEEECCccHHhccCCCCCHHHHHHHHHHHhhcccc-c---cc---cCCHHHHHHHHHHHhhcCC--CEEEECCCcHHH
Confidence 3346776542 233589999999988653211 0 11 1135777888999998775 579999999999
Q ss_pred HHHHHHHhhhhhcCC---CCEEEEcCCCCcchHHHHHHHHhcCcEE---EEEeCCCCC----CCCHHHHHHhcCCCceEE
Q 040741 131 NNVSIKGVMHFYKDK---KRHVITTQTEHKCVLDSCRHLQQEGFEI---TYLPVGADG----IVNLDELRAAIRPDTGLI 200 (457)
Q Consensus 131 ~~~al~~~~~~~~~~---g~~vi~~~~~h~~~~~~~~~~~~~G~~v---~~v~~~~~~----~~d~~~le~~i~~~t~li 200 (457)
+.++++.+..+.... +++|++....|.........+ .+... .+.+...+. ..|++++++++++++++|
T Consensus 109 ~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v 186 (396)
T PRK02627 109 NEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSA--TGQPKYQEGFEPLVEGFIYVPFNDIEALKAAITDKTAAV 186 (396)
T ss_pred HHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHh--cCCccccccCCCCCCCceEeCCCCHHHHHHhcCCCeEEE
Confidence 999999776432211 266776665554443332222 12111 111111111 128999999999899999
Q ss_pred EEecccccccc-ccC---hHHHHHHHHhcCCcEEEehhhh-cCCC--ccc--CCCCcccEEEeccccccCC-CCceEEEE
Q 040741 201 SVMAVNNEIGV-IQP---MEEIGQICKEFKIPFHTDAAQA-LGKI--PVD--VEKWNVSLMSLSGHKIYGP-KGVGALYM 270 (457)
Q Consensus 201 ~i~~~~~~~G~-~~~---l~~i~~l~~~~~v~li~D~a~~-~g~~--~~~--~~~~~~Di~~~s~~K~~g~-~G~G~l~~ 270 (457)
+++++++++|. ..| +++|.++|++||+++|+|++++ ++.. ... .....+|+++ ++|.+|+ -.+|++++
T Consensus 187 ii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pdi~t--~sK~~~~G~rig~~~~ 264 (396)
T PRK02627 187 MLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPDIMT--LAKGLGGGVPIGAVLA 264 (396)
T ss_pred EEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCCEEE--EcchhhCCcccEEEEE
Confidence 99999999995 433 8899999999999999999987 3321 111 1122457654 6696663 24899999
Q ss_pred ecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhc---CCCeEEeCCCC
Q 040741 271 RRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEK---LDGVVVNGSME 347 (457)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~ 347 (457)
+++..+.+...... .....++..++++.++++.... +...++.+++.+++++.|.+. ++.+....
T Consensus 265 ~~~~~~~~~~~~~~-------~t~~~~~~~~~aa~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--- 332 (396)
T PRK02627 265 KEKVADVFTPGDHG-------STFGGNPLACAAALAVIEIIEE--EGLLENAAEVGEYLRAKLRELLEKYPGIKEVR--- 332 (396)
T ss_pred cHHHHhccCCCCCC-------CCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHHhCCCeeeec---
Confidence 87765555432111 1113455666666677776554 334455555666665555441 22222111
Q ss_pred CcccceEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHH
Q 040741 348 RRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIEL 425 (457)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~ 425 (457)
..+.++.+.+. .+...+...+ +||.+.++. .+++||+++..++++++++++++
T Consensus 333 -~~g~~~~i~~~-~~~~~~~~~l~~~Gv~v~~~~-----------------------~~~lRi~~~~~~~~~~i~~~~~~ 387 (396)
T PRK02627 333 -GLGLMIGIELD-RPAAEIVKKALEKGLLINVTG-----------------------DNVLRLLPPLIISKEEIDEAVDR 387 (396)
T ss_pred -cCcEEEEEEec-CcHHHHHHHHHHCCeEEeecC-----------------------CCEEEEECCcccCHHHHHHHHHH
Confidence 12344444442 3445566555 588776532 16899999888899999999999
Q ss_pred HHHHHHHH
Q 040741 426 TVKQVEKL 433 (457)
Q Consensus 426 l~~~~~~~ 433 (457)
|+++++++
T Consensus 388 l~~~l~~~ 395 (396)
T PRK02627 388 LEEVLKEL 395 (396)
T ss_pred HHHHHHhh
Confidence 99988754
No 268
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.88 E-value=1e-20 Score=183.81 Aligned_cols=267 Identities=15% Similarity=0.063 Sum_probs=185.5
Q ss_pred HHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCC
Q 040741 104 ETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGI 183 (457)
Q Consensus 104 ~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~ 183 (457)
.++++.+++++|. +++++|+|+++++.+++ .. .+|++|++..+.|+.+...++.. |.+++.++.+
T Consensus 52 ~~Lr~~ia~~~~~--~~I~it~Gs~~al~~~~--~~----~~gd~v~v~~P~y~~~~~~~~~~---g~~~~~v~~~---- 116 (330)
T PRK05664 52 DGLEAAARAYYGA--PQLLPVAGSQAAIQALP--RL----RAPGRVGVLSPCYAEHAHAWRRA---GHQVRELDEA---- 116 (330)
T ss_pred HHHHHHHHHHhCC--CCEEECcCHHHHHHHHH--Hc----cCCCEEEEcCCChHHHHHHHHHc---CCeEEEechh----
Confidence 5789999999985 47999999999998864 23 68999999999999998887776 9999988753
Q ss_pred CCHHHHHHhcCCCceEEEEeccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCCC--c-ccCCCCcccEEEeccc
Q 040741 184 VNLDELRAAIRPDTGLISVMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKI--P-VDVEKWNVSLMSLSGH 257 (457)
Q Consensus 184 ~d~~~le~~i~~~t~li~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~--~-~~~~~~~~Di~~~s~~ 257 (457)
+++++++ +++++++++|+||||.+.+ +++|+++|+++|++||+|+++.-... + ......+.-+++.|++
T Consensus 117 ----~~~~~~~-~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfS 191 (330)
T PRK05664 117 ----EVEAALD-SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFG 191 (330)
T ss_pred ----hHhhhhc-CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeecc
Confidence 4555554 6778889999999999998 55566677899999999999863321 1 1222222347889999
Q ss_pred cccCCCC--ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhh
Q 040741 258 KIYGPKG--VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKE 335 (457)
Q Consensus 258 K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~ 335 (457)
|.+|.+| +||++++++.++++...... ...+.....++..++... ...++.+++++++++++.+.|++
T Consensus 192 K~~gl~GlRiG~~v~~~~l~~~~~~~~~~---------~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~r~~l~~~L~~ 261 (330)
T PRK05664 192 KFFGLAGARLGFVLAEPALLRALAELLGP---------WTVSGPTRWLAQAALADT-PWQRRQRERLLAASQRLAALLRR 261 (330)
T ss_pred ccccCCCcceEEEEeCHHHHHHHHHhcCC---------CCCCHHHHHHHHHHHhCh-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888655 99999987766655443221 123334444444455321 23466778888889999999988
Q ss_pred cCCCeEEeCCCCCcccceEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCC
Q 040741 336 KLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRF 413 (457)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~ 413 (457)
+ ++... ..... .++++..+...+...+ +||.+.. +. ..++|||+++.
T Consensus 262 -~-~~~~~----~~~~~--f~~~~~~~~~~~~~~l~~~gi~v~~---f~-------------------~~~~iRis~~~- 310 (330)
T PRK05664 262 -H-GLTPA----GGCAL--FQWVRTEDAAALHEFLARRGILTRL---FE-------------------QPASLRFGLPA- 310 (330)
T ss_pred -C-CCccc----CCcce--EEEEecCCHHHHHHHHHHCCeEEEE---CC-------------------CCCeEEEECCC-
Confidence 4 43221 11122 3333333456666666 6888852 11 11699999985
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 040741 414 TTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 414 ~t~edid~~~~~l~~~~~~ 432 (457)
+.++.+++.++|++..++
T Consensus 311 -~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 311 -DEADWARLDQALLAYRKE 328 (330)
T ss_pred -CHHHHHHHHHHHHHHHhh
Confidence 578888888888766543
No 269
>PRK08637 hypothetical protein; Provisional
Probab=99.88 E-value=6.7e-21 Score=189.45 Aligned_cols=297 Identities=16% Similarity=0.094 Sum_probs=189.8
Q ss_pred HHHHHHHHHHHHHh-----CCCC---CcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcE
Q 040741 101 VAVETARSQIADLI-----GASP---KEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFE 172 (457)
Q Consensus 101 ~~~~~~~~~la~~~-----g~~~---~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~ 172 (457)
....++++.+++++ ...+ +++++|+|+++++.+++.++. ++||.|++..+.|+.+...+.. ..|.+
T Consensus 44 ~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~----~~gd~Vlv~~P~y~~~~~~~~~--~~g~~ 117 (388)
T PRK08637 44 QGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFV----DQGDTVLLPDHNWGNYKLTFNT--RRGAE 117 (388)
T ss_pred CCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhc----CCCCEEEEcCCCCccHHHHHHH--hcCCE
Confidence 34566777777655 2222 468999999999999999988 8999999999999998875432 13999
Q ss_pred EEEEeCC-CCCCCCHHHHHHhcC----CCceEEEEeccccccccccC---hHHHHHHHHh-----cCCcEEEehhhhcCC
Q 040741 173 ITYLPVG-ADGIVNLDELRAAIR----PDTGLISVMAVNNEIGVIQP---MEEIGQICKE-----FKIPFHTDAAQALGK 239 (457)
Q Consensus 173 v~~v~~~-~~~~~d~~~le~~i~----~~t~li~i~~~~~~~G~~~~---l~~i~~l~~~-----~~v~li~D~a~~~g~ 239 (457)
++.++.. +++.+|+++++++++ +.+.+++++++|||||.+.+ +++|+++|++ |+++||+|+++.--.
T Consensus 118 vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~ 197 (388)
T PRK08637 118 IVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLF 197 (388)
T ss_pred EEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcc
Confidence 9999983 455689999999876 55677888899999999988 5667777765 899999999986321
Q ss_pred ----Cccc----C-CCC-ccc-EEEeccccccCCCC--ceEEEEec------CCCccccccccCCccccccccCCCChhH
Q 040741 240 ----IPVD----V-EKW-NVS-LMSLSGHKIYGPKG--VGALYMRR------RPRIRVEPLINGGGQERGIRSGTLPTPL 300 (457)
Q Consensus 240 ----~~~~----~-~~~-~~D-i~~~s~~K~~g~~G--~G~l~~~~------~~~~~~~~~~~~~~~~~~~~~~t~~~~~ 300 (457)
.... . ... ++. +.+.|++|.|+.+| +||+++.. +..+++........ .......+...
T Consensus 198 ~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~s~~~ 274 (388)
T PRK08637 198 YEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLI---RSNISNGPHPS 274 (388)
T ss_pred cCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHh---hcccCCCCcHH
Confidence 1101 0 111 121 22348999766555 99998753 33333322110000 00111334444
Q ss_pred HHHHHHHHHH--HHHhhHHHHHHHHHHHHHHHHHHhhcC---CCeEEeCCCCCcccceEEEEEccccchHHHhcc---cC
Q 040741 301 IVGFGSACEI--AKKEMDYDHKRITALHDRLLNGIKEKL---DGVVVNGSMERRYIGNLNLSFAYVEGESLLMGL---KE 372 (457)
Q Consensus 301 ~~al~~al~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~ 372 (457)
..++..+++. ....+.+.+..+++..+.+.+.|.+ . +++.+..+. . +.++.+.++..+..++...+ +|
T Consensus 275 q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~-~~~~~~~~~~~~~-~--g~~~~~~l~~~~~~~l~~~l~~~~g 350 (388)
T PRK08637 275 QSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYD-GKYDDAWQAYPFN-S--GYFMCLKLKGVDAEELRVHLLEKYG 350 (388)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCCCCccccccc-c--eEEEEecCChHHHHHHHHHHhhhcc
Confidence 4444445431 1223445555667777777777766 3 134444321 1 22333344433456666665 37
Q ss_pred eEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 373 VAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 373 i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
|.+... .++++||+++. .+.++++.++++|.++++.++
T Consensus 351 v~~~~~-----------------------~~~~iRi~~~~-~~~~~i~~~~~~l~~~~~~~~ 388 (388)
T PRK08637 351 IGTIAL-----------------------NETDLRIAFSC-VEEEDIPELFDSIYKAIKDLR 388 (388)
T ss_pred eEEEec-----------------------cCCceEEEeec-CCHHHHHHHHHHHHHHHHhcC
Confidence 766421 12689999987 568999999999999998653
No 270
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.88 E-value=6.7e-21 Score=169.85 Aligned_cols=317 Identities=17% Similarity=0.172 Sum_probs=222.7
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCE
Q 040741 69 VDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRH 148 (457)
Q Consensus 69 ~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~ 148 (457)
-.|++.++-.+.++++...+.+.....|+. +.+..+++.+|+|-+-++ .++.+++-.|+..++.++. .|.+.
T Consensus 82 shPeii~a~~~aleeyGaGlssvrfIcGtq--~iHk~LE~kiAqfh~rED--~ilypscfdANag~feail----~pedA 153 (417)
T KOG1359|consen 82 SHPEIINAGQKALEEYGAGLSSVRFICGTQ--DIHKLLESKIAQFHGRED--TILYPSCFDANAGAFEAIL----TPEDA 153 (417)
T ss_pred CChHHHHHHHHHHHHhCCCccceeEEecch--HHHHHHHHHHHHHhCCCc--eEEeccccccchHHHHHhc----Chhhh
Confidence 357888888888876544455434444444 789999999999999765 8888999999988888888 89999
Q ss_pred EEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhc----CCCceEEEEeccccccccccChHHHHHHHHh
Q 040741 149 VITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAI----RPDTGLISVMAVNNEIGVIQPMEEIGQICKE 224 (457)
Q Consensus 149 vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i----~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~ 224 (457)
|+.+..+|.+..+.++.+++. +.+|+-+++..+ +-+-++|....+.++-|-+.|+++|.+++++
T Consensus 154 vfSDeLNhASIIdGirLckry------------~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaPl~ei~~La~k 221 (417)
T KOG1359|consen 154 VFSDELNHASIIDGIRLCKRY------------RHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAPLEEISQLAKK 221 (417)
T ss_pred hhccccccchhhhhhHHHhhh------------ccchhHHHHHHHHHhhhheEEEEEecceeccCCCcccHHHHHHHHHh
Confidence 999999999999999988532 234555555433 4466899999999999999999999999999
Q ss_pred cCCcEEEehhhhcCCCcc-------cCC-CCcccEEEeccccccC-CCCceEEEEecCCCccccccccCCccccccccCC
Q 040741 225 FKIPFHTDAAQALGKIPV-------DVE-KWNVSLMSLSGHKIYG-PKGVGALYMRRRPRIRVEPLINGGGQERGIRSGT 295 (457)
Q Consensus 225 ~~v~li~D~a~~~g~~~~-------~~~-~~~~Di~~~s~~K~~g-~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t 295 (457)
||.++++|++|+-|.... .+. ...+|++..++.|..| ..| |+..++++++.-++.....+ +.+.+
T Consensus 222 YgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G-Gyttgp~~li~llrqr~Rpy-----lFSns 295 (417)
T KOG1359|consen 222 YGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASG-GYTTGPKPLISLLRQRSRPY-----LFSNS 295 (417)
T ss_pred cCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCC-CCccCChhHHHHHHhcCCce-----eecCC
Confidence 999999999998543311 111 1258999999999554 665 99998877654333221111 22334
Q ss_pred CChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccc-cchHHHhcc--cC
Q 040741 296 LPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYV-EGESLLMGL--KE 372 (457)
Q Consensus 296 ~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l--~~ 372 (457)
.++.......+++...+. -.....+.+.+.+++++..+. .|+.+-+.. .++..+.+.+. -...+.+.| +|
T Consensus 296 lppavV~~a~ka~dllm~-s~~~i~~~~a~~qrfr~~me~--aGftIsg~~----hPI~pv~lGda~lA~~~ad~lLk~G 368 (417)
T KOG1359|consen 296 LPPAVVGMAAKAYDLLMV-SSKEIQSRQANTQRFREFMEA--AGFTISGAS----HPICPVMLGDARLASKMADELLKRG 368 (417)
T ss_pred CChhhhhhhHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHh--cCceecCCC----CCccceecccHHHHHHHHHHHHhcC
Confidence 554444444455555443 256677788888899888877 799988743 22222222211 122333333 68
Q ss_pred eEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 373 VAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 373 i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
|.+..-+.... +.+.-+||+-++..+|+||||++++++.++.+.++
T Consensus 369 i~Vigfs~PvV----------------P~gkariRVqiSAaHt~edid~~i~Af~~vgr~~~ 414 (417)
T KOG1359|consen 369 IYVIGFSYPVV----------------PKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFLN 414 (417)
T ss_pred ceEEeecCCcC----------------CCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhhc
Confidence 77764333221 22346899999999999999999999999987654
No 271
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.88 E-value=5.2e-21 Score=187.44 Aligned_cols=302 Identities=14% Similarity=0.148 Sum_probs=204.3
Q ss_pred cchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHH-HHHHhcCc
Q 040741 93 HLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSC-RHLQQEGF 171 (457)
Q Consensus 93 ~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~-~~~~~~G~ 171 (457)
+.|++...+...++++.++++.|.+. ++.+++|+.|+.+++.++. ++||+||++...|....... ..+...|+
T Consensus 56 ~~Y~r~~~P~~~~lE~~la~leg~~~--av~~sSG~aAi~~al~all----~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi 129 (384)
T PRK06434 56 YIYTRWGNPTVQAFEEKYAVLENAEH--ALSFSSGMGAITSAILSLI----KKGKRILSISDLYGQTFYFFNKVLKTLGI 129 (384)
T ss_pred cceeCCCChhHHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHHh----CCCCEEEEecCccchHHHHHHHHHHhcCc
Confidence 34444455889999999999999865 8899999999999999987 89999999877666666544 34456699
Q ss_pred EEEEEeCCCCCCCCHHHHHHhcCC-CceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCccc
Q 040741 172 EITYLPVGADGIVNLDELRAAIRP-DTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVS 250 (457)
Q Consensus 172 ~v~~v~~~~~~~~d~~~le~~i~~-~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~D 250 (457)
++++++++....++ +++ ++++|+++++.||++.+.|+++|.++|++++ +++|++++.+... ..-..++|
T Consensus 130 ~v~fvd~~~~~~~~-------l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~~-~pl~~gaD 199 (384)
T PRK06434 130 HVDYIDTDRLNSLD-------FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYNQ-NPLDLGAD 199 (384)
T ss_pred EEEEECCCChhhee-------ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcccC-CchhcCCC
Confidence 99999987322222 333 6899999999999999999999999999998 5679998655331 12245799
Q ss_pred EEEeccccccC-CCC--ceEEEEecC-CCccccccccCCccccccccCCCChhHHHHHHHHHHH-HHHhhHHHHHHHHHH
Q 040741 251 LMSLSGHKIYG-PKG--VGALYMRRR-PRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEI-AKKEMDYDHKRITAL 325 (457)
Q Consensus 251 i~~~s~~K~~g-~~G--~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~-~~~~~~~~~~~~~~~ 325 (457)
++++|.+|+++ +.+ .|+++.+++ ..+++.......+ ...+... +++-. -.+.++.++++..++
T Consensus 200 ivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G-------~~~~~~~-----A~l~~~gL~tL~~R~~r~~~~ 267 (384)
T PRK06434 200 VVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLG-------SNPDPIQ-----AYLALRGLKTLGLRMEKHNKN 267 (384)
T ss_pred EEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcC-------CCCCHHH-----HHHHHhCCCcHHHHHHHHHHH
Confidence 99999999654 443 577766543 2233332211111 1222211 11111 112478888999999
Q ss_pred HHHHHHHHhhcCCCeE-EeCCC-------CCcccceEEEEEccc-cchHHHhccc--CeEecccCccC----CCCCChh-
Q 040741 326 HDRLLNGIKEKLDGVV-VNGSM-------ERRYIGNLNLSFAYV-EGESLLMGLK--EVAVSSGSACT----SASLEPS- 389 (457)
Q Consensus 326 ~~~l~~~l~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~l~--~i~~~~g~~~~----~~~~~~~- 389 (457)
+..+.+.|++ .|.+. |+-+. -...++++.|.+.+. ....++..|+ .++++-|...+ +....+.
T Consensus 268 a~~~a~~L~~-~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~ 346 (384)
T PRK06434 268 GMELARFLRD-SKKISNVYYPDTEIGKKVLRGFGGMLSFELRSMEDVHKFIRNLEIPMVAASLGGVESLITLPVETSHSS 346 (384)
T ss_pred HHHHHHHHHc-CCCccEEECCChHHHHHhcCCCCceEEEEECCHHHHHHHHHhCCcceEccCCCCCCeeeECCCcccccc
Confidence 9999999999 77763 22211 124577888888642 2235555554 45555565422 2222111
Q ss_pred ---HHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 390 ---YVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 390 ---~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
-.....|+.+ +.|||+++. ||++.+++.|+++++
T Consensus 347 ~~~e~~~~~gi~~----~liRlsvGl----Ed~~dLi~dl~~Al~ 383 (384)
T PRK06434 347 LSPEERERLGISD----NLVRFSIGI----EDIDDLIKDIENALS 383 (384)
T ss_pred CCHHHHHhcCCCc----CeEEEEeCc----CCHHHHHHHHHHHhc
Confidence 1234567665 899999997 788889999888875
No 272
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.88 E-value=7.1e-20 Score=181.47 Aligned_cols=329 Identities=16% Similarity=0.153 Sum_probs=206.2
Q ss_pred CCcEEecCCC------CCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHH
Q 040741 56 GRPLYLDMQA------TTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATE 129 (457)
Q Consensus 56 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~ 129 (457)
.+.-|+|+.+ -+...|++.+++.+.+.... ++.. . ...+...++.+.+.+..+. +.++|++||++
T Consensus 34 dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~-~~~~---~---~~~~~~~~la~~l~~~~~~--~~v~f~~SGse 104 (395)
T PRK03715 34 NGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLI-NPSP---A---FYNEPMAKLAGLLTQHSCF--DKVFFANSGAE 104 (395)
T ss_pred CCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcc-cccc---c---ccCHHHHHHHHHHhhccCC--CEEEEeCCcHH
Confidence 3456788754 23557999999999986532 1111 0 1113444555555554433 46999999999
Q ss_pred HHHHHHHHhhhhhc----CCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCC----CCCCHHHHHHhcCCCceEEE
Q 040741 130 SNNVSIKGVMHFYK----DKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGAD----GIVNLDELRAAIRPDTGLIS 201 (457)
Q Consensus 130 a~~~al~~~~~~~~----~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~----~~~d~~~le~~i~~~t~li~ 201 (457)
|++.+++.+..+.. ++.+.|......|.+...++......+.+..+.|...+ ...|++++++.+.+++++|+
T Consensus 105 A~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi 184 (395)
T PRK03715 105 ANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVM 184 (395)
T ss_pred HHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCCceEEE
Confidence 99999998875421 12234455666788877776554221111111111111 12488999999988899999
Q ss_pred EeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc----ccCCCCcccEEEecccccc-CCCCceEEEEe
Q 040741 202 VMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP----VDVEKWNVSLMSLSGHKIY-GPKGVGALYMR 271 (457)
Q Consensus 202 i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~----~~~~~~~~Di~~~s~~K~~-g~~G~G~l~~~ 271 (457)
++.+++..|.+.| +++|.++|++||+++|+|++++ +|... .......+|+++++ |.+ |...+|+++++
T Consensus 185 ~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~g--K~lg~G~p~~av~~~ 262 (395)
T PRK03715 185 LEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTLG--KGIGGGVPLAALLAK 262 (395)
T ss_pred EeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceeeeh--hhhhCCcceEEEEEc
Confidence 9999999999887 9999999999999999999987 22211 11112247887665 943 33347888888
Q ss_pred cCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcC---CCeEEeCCCCC
Q 040741 272 RRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKL---DGVVVNGSMER 348 (457)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~~~~~ 348 (457)
++... +.+...+ ..+ ..++..+++..++++.+++ +...++.+++.+++++.|++ + .++. + ..
T Consensus 263 ~~i~~-~~~~~~~------~T~-~g~pl~~aaala~L~~l~~--~~l~~~~~~~g~~l~~~L~~-l~~~~~i~---~-vr 327 (395)
T PRK03715 263 AEVAV-FEAGDQG------GTY-NGNPLMTAVGVAVISQLLA--PGFLEGVRARGEYLKEKLLE-LSEERGLE---G-ER 327 (395)
T ss_pred ccccc-ccCCCcC------CCC-CCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHH-HhhcCCcC---e-EE
Confidence 76532 1111111 111 3456667777778888765 56777888888888888775 2 1221 1 11
Q ss_pred cccceEEEEEccccchHHHhcc-----cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHH
Q 040741 349 RYIGNLNLSFAYVEGESLLMGL-----KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAI 423 (457)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~l-----~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~ 423 (457)
..+.++.+.+.......+...+ +|+.+... ....|||.++..+|++|||+++
T Consensus 328 G~Glm~~i~l~~~~~~~~~~~~~~~~~~Gi~~~~~-----------------------~~~~lR~~p~l~~t~~ei~~~~ 384 (395)
T PRK03715 328 GEGLLRALLLGKDIGPQIVEKARDMQPDGLLLNAP-----------------------RPNLLRFMPALNVTTEEIDQMI 384 (395)
T ss_pred cceeEEEEEecCchHHHHHHHHHhccCCCEEEeec-----------------------CCCEEEEeCCcccCHHHHHHHH
Confidence 2244455555422122222222 26655311 1168999999999999999999
Q ss_pred HHHHHHHHHH
Q 040741 424 ELTVKQVEKL 433 (457)
Q Consensus 424 ~~l~~~~~~~ 433 (457)
++|+++++++
T Consensus 385 ~~l~~~l~~~ 394 (395)
T PRK03715 385 AMLRSVLDKL 394 (395)
T ss_pred HHHHHHHHhh
Confidence 9999998764
No 273
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.88 E-value=2.8e-20 Score=185.79 Aligned_cols=323 Identities=17% Similarity=0.207 Sum_probs=213.0
Q ss_pred CcEEecCCCCC------CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHH
Q 040741 57 RPLYLDMQATT------PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATES 130 (457)
Q Consensus 57 ~~i~l~~~~~~------~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a 130 (457)
+.-|+|+.+.- ..+|++.+++.+.+.... ... .. + ..+...++++++++++|.+ .++|+++|++|
T Consensus 36 g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~-~~~---~~--~-~~~~~~~l~~~l~~~~~~~--~~~~~~SGs~A 106 (401)
T TIGR01885 36 GKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLT-LSS---RA--F-YNDVFGEFAEYVTKLFGYD--KVLPMNTGAEA 106 (401)
T ss_pred CCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhcc-ccc---cc--c-CCHHHHHHHHHHHhhcCCC--EEEEeCccHHH
Confidence 33477775532 248999999999987531 111 11 1 2367788999999999864 59999999999
Q ss_pred HHHHHHHhhhhhc------CCCCEEEEcCCC-CcchHHHHHHHHh------cC---cEEEEEeCCCCCCCCHHHHHHhcC
Q 040741 131 NNVSIKGVMHFYK------DKKRHVITTQTE-HKCVLDSCRHLQQ------EG---FEITYLPVGADGIVNLDELRAAIR 194 (457)
Q Consensus 131 ~~~al~~~~~~~~------~~g~~vi~~~~~-h~~~~~~~~~~~~------~G---~~v~~v~~~~~~~~d~~~le~~i~ 194 (457)
+..+++.+..+.. ..++.|+..... |.+...++..... .| ..+..++.+ |+++++++++
T Consensus 107 ~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~ 181 (401)
T TIGR01885 107 VETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYN-----NLEALEEALE 181 (401)
T ss_pred HHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCC-----CHHHHHHHHH
Confidence 9999998764321 235677777766 4455665543311 11 122333332 7899998885
Q ss_pred ---CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCC--Cc--ccCCCCcccEEEeccccccCC
Q 040741 195 ---PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGK--IP--VDVEKWNVSLMSLSGHKIYGP 262 (457)
Q Consensus 195 ---~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~--~~--~~~~~~~~Di~~~s~~K~~g~ 262 (457)
++...|+++.+++++|.+.| +++|.++|++||+++|+|++|. +|. .. .....+.+|++++| |.++.
T Consensus 182 ~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~~~g--K~l~~ 259 (401)
T TIGR01885 182 DHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIVLLG--KALSG 259 (401)
T ss_pred hcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCCCCCEEEee--ccccC
Confidence 45678889999999999988 9999999999999999999985 321 11 11223457887665 95443
Q ss_pred --CCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCe
Q 040741 263 --KGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGV 340 (457)
Q Consensus 263 --~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 340 (457)
..+|+++.+++..+.+.....+ ... +.++..++++.++++.+.++ ...++.+++.+++++.|++ +. .
T Consensus 260 g~~~ig~v~~~~~i~~~~~~~~~~------~t~-~~~p~~~~aa~a~L~~i~~~--~l~~~~~~~~~~~~~~L~~-l~-~ 328 (401)
T TIGR01885 260 GVYPVSAVLADDDVMLTIKPGEHG------STY-GGNPLACAVAVAALEVLEEE--KLAENAEKLGEIFRDQLKK-LP-K 328 (401)
T ss_pred CCCCcEEEEEcHHHHhhccCCCCC------CCC-CCCHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHh-cc-C
Confidence 2388899887655554432111 111 34566677777788877652 4557788889999999988 53 1
Q ss_pred EEeCCCCCcccceEEEEEccc----cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCC
Q 040741 341 VVNGSMERRYIGNLNLSFAYV----EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFT 414 (457)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~ 414 (457)
.++.+. ...+.+..+.+... ....+...| +||.+.++. .+.+||+++..+
T Consensus 329 ~~~~~~-~g~g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~~~~-----------------------~~~lRi~p~l~~ 384 (401)
T TIGR01885 329 PIITEV-RGRGLLNAIVIDESKTGRTAWDLCLKLKEKGLLAKPTH-----------------------GNIIRLAPPLVI 384 (401)
T ss_pred CceeEE-eecCeeEEEEeccCcchhHHHHHHHHHHhCCEEEEecC-----------------------CCEEEEeCCccC
Confidence 222111 11244444445322 234555555 577764321 278999999999
Q ss_pred CHHHHHHHHHHHHHHH
Q 040741 415 TEAEVDRAIELTVKQV 430 (457)
Q Consensus 415 t~edid~~~~~l~~~~ 430 (457)
+++||++++++|++++
T Consensus 385 t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 385 TEEQLDEGLEIIKKVI 400 (401)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999999876
No 274
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.88 E-value=7.3e-20 Score=181.49 Aligned_cols=319 Identities=18% Similarity=0.205 Sum_probs=200.5
Q ss_pred CcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHH
Q 040741 57 RPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATES 130 (457)
Q Consensus 57 ~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a 130 (457)
+.-|+|+.+. +..+|++.+++.+.+...... .. . ...+...++.+.+++..+. +.++|++||++|
T Consensus 28 G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~-~~---~---~~~~~~~~la~~l~~~~~~--~~~~~~~sG~~a 98 (377)
T PRK02936 28 GKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHV-SN---L---FTNSLQEEVASLLAENSAG--DLVFFCNSGAEA 98 (377)
T ss_pred CCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcccc-cc---c---cCCHHHHHHHHHHHhcCCC--CEEEEeCCcHHH
Confidence 3457776554 357899999999998763211 10 0 0124555566666665553 359999999999
Q ss_pred HHHHHHHhhhhhcCCCCEEE-EcCCCCcchHHHHHHHHhcCc---------EEEEEeCCCCCCCCHHHHHHhcCCCceEE
Q 040741 131 NNVSIKGVMHFYKDKKRHVI-TTQTEHKCVLDSCRHLQQEGF---------EITYLPVGADGIVNLDELRAAIRPDTGLI 200 (457)
Q Consensus 131 ~~~al~~~~~~~~~~g~~vi-~~~~~h~~~~~~~~~~~~~G~---------~v~~v~~~~~~~~d~~~le~~i~~~t~li 200 (457)
++.+++.... + ..++.|+ .....|.+............. .+..++.+ |++++++.+.+++++|
T Consensus 99 ~~~A~~~a~~-~-~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~~~~~~~~i 171 (377)
T PRK02936 99 NEAALKLARK-H-TGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFN-----DIKALKEVMNEEVAAV 171 (377)
T ss_pred HHHHHHHHHH-h-cCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCC-----CHHHHHHhccCCeEEE
Confidence 9999996542 2 2234454 455677777666543311111 12223322 7999999999899999
Q ss_pred EEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCC--cccC--CCCcccEEEeccccccCCC-CceEEEE
Q 040741 201 SVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKI--PVDV--EKWNVSLMSLSGHKIYGPK-GVGALYM 270 (457)
Q Consensus 201 ~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~--~~~~--~~~~~Di~~~s~~K~~g~~-G~G~l~~ 270 (457)
+++.++++.|...+ +++|.++|++||+++|+|++|. +|.. .+.. ....+|++ +++|.+|+. .+|+++.
T Consensus 172 i~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l~~G~~ig~v~~ 249 (377)
T PRK02936 172 MLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPDIV--TVAKGLGNGIPVGAMIG 249 (377)
T ss_pred EEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCcEE--EEcccccCCCccEEEEE
Confidence 99999998887743 9999999999999999999986 2211 1111 12235765 567976631 2799998
Q ss_pred ecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhc---CCCeEEeCCCC
Q 040741 271 RRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEK---LDGVVVNGSME 347 (457)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~ 347 (457)
+++..+.+...... ... ..++..++++.++++.... +...++.+++.+++++.|.+. ++.+..+.
T Consensus 250 ~~~~~~~~~~~~~~------~t~-~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~--- 317 (377)
T PRK02936 250 KKELGTAFGPGSHG------STF-GGNPLAMAAAKEVLQVIKQ--PSFLEEVQEKGEYFLQKLQEELEHLECVKNIR--- 317 (377)
T ss_pred cHHHHhhccCCCCC------CCC-CCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEe---
Confidence 87765555432211 111 3566677777778877643 344456666666666666552 33322111
Q ss_pred CcccceEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHH
Q 040741 348 RRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIEL 425 (457)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~ 425 (457)
..+.++.+.+.. +...+...+ +||.+.++. .+.|||+++..++++++++++++
T Consensus 318 -~~g~~~~i~~~~-~~~~~~~~l~~~gv~v~~~g-----------------------~~~lRi~p~~~~~~~~i~~~i~~ 372 (377)
T PRK02936 318 -GKGLMIGIECTE-EVAPVIEQLREEGLLVLSAG-----------------------PNVIRLLPPLVVTKEELDQAVYL 372 (377)
T ss_pred -ecceEEEEEecc-hHHHHHHHHHHCCeEEecCC-----------------------CCEEEEECCcccCHHHHHHHHHH
Confidence 113344455542 234455444 577765421 26899999888999999999999
Q ss_pred HHHHH
Q 040741 426 TVKQV 430 (457)
Q Consensus 426 l~~~~ 430 (457)
|++++
T Consensus 373 l~~~~ 377 (377)
T PRK02936 373 LKKVL 377 (377)
T ss_pred HHHhC
Confidence 98753
No 275
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.88 E-value=9.9e-20 Score=181.81 Aligned_cols=330 Identities=14% Similarity=0.160 Sum_probs=207.8
Q ss_pred CCcEEecCCC------CCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHH
Q 040741 56 GRPLYLDMQA------TTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATE 129 (457)
Q Consensus 56 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~ 129 (457)
.+.-|+|+.+ -+...|++.+|+.+.+........ ++ ..+...++.+.|+++++. +.++|++||++
T Consensus 37 dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~------~~-~~~~~~~la~~l~~~~~~--~~v~~~~sGse 107 (406)
T PRK12381 37 QGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGN------GY-TNEPVLRLAKKLIDATFA--DRVFFCNSGAE 107 (406)
T ss_pred CCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccC------cc-CCHHHHHHHHHHHhhCCC--CeEEEcCCcHH
Confidence 4445788755 235689999999999875322111 11 124567899999998865 46999999999
Q ss_pred HHHHHHHHhhhhhc----CCCCEEEE-cCCCCcchHHHHHHHHhcCc---------EEEEEeCCCCCCCCHHHHHHhcCC
Q 040741 130 SNNVSIKGVMHFYK----DKKRHVIT-TQTEHKCVLDSCRHLQQEGF---------EITYLPVGADGIVNLDELRAAIRP 195 (457)
Q Consensus 130 a~~~al~~~~~~~~----~~g~~vi~-~~~~h~~~~~~~~~~~~~G~---------~v~~v~~~~~~~~d~~~le~~i~~ 195 (457)
|++.+++....+.. ..+..|+. ....|.....+......... .+..++ ..|++++++.+++
T Consensus 108 A~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~ 182 (406)
T PRK12381 108 ANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAA-----YNDLNSASALIDD 182 (406)
T ss_pred HHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeC-----CCCHHHHHHhccC
Confidence 99999998765431 13455655 44556665544433211101 112222 2389999999988
Q ss_pred CceEEEEecccccccccc----ChHHHHHHHHhcCCcEEEehhhh-cCCC--ccc--CCCCcccEEEeccccccC-CCCc
Q 040741 196 DTGLISVMAVNNEIGVIQ----PMEEIGQICKEFKIPFHTDAAQA-LGKI--PVD--VEKWNVSLMSLSGHKIYG-PKGV 265 (457)
Q Consensus 196 ~t~li~i~~~~~~~G~~~----~l~~i~~l~~~~~v~li~D~a~~-~g~~--~~~--~~~~~~Di~~~s~~K~~g-~~G~ 265 (457)
++++|+++.++...|.+. .+++|.++|++||+++|+|++|. +|.. .+. .....+|++ +++|.+| .-.+
T Consensus 183 ~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi~--t~sK~l~gG~~i 260 (406)
T PRK12381 183 QTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVL--TTAKALGGGFPI 260 (406)
T ss_pred CeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCEE--EehhhhhCCCce
Confidence 899999987655455443 28899999999999999999984 3221 111 112246765 6669554 2338
Q ss_pred eEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCC-CeEEeC
Q 040741 266 GALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLD-GVVVNG 344 (457)
Q Consensus 266 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~ 344 (457)
|+++++++..+.+.....+ .. ...++..+++..++++.+.+ +...++.+++.+++.+.|++ +. .+.+..
T Consensus 261 g~~~~~~~~~~~~~~~~~~------~t-~~~~pl~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L~~-l~~~~~~~~ 330 (406)
T PRK12381 261 GAMLTTEKCASVMTVGTHG------TT-YGGNPLASAVAGKVLELINT--PEMLNGVKQRHDWFVERLNT-INARYGLFS 330 (406)
T ss_pred EEEEEcHHHHhhcCCCCCC------CC-CCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHH-HHhhCCCEE
Confidence 9999988766655432211 11 13456667767777777654 45778888888888888877 31 111111
Q ss_pred CCCCcccceEEEEEccc---cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHH
Q 040741 345 SMERRYIGNLNLSFAYV---EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEV 419 (457)
Q Consensus 345 ~~~~~~~~~~~~~~~~~---~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edi 419 (457)
+. ...+.++.+.+... ....+...+ +||.+... +.+.|||+++..++++||
T Consensus 331 ~v-rg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~-----------------------g~~~lRl~p~~~~t~~~i 386 (406)
T PRK12381 331 EI-RGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIA-----------------------GPNVVRFAPALNISEEEI 386 (406)
T ss_pred EE-ecCeEEEEEEecCchhhHHHHHHHHHHHCCcEEeeC-----------------------CCCEEEEeCCccCCHHHH
Confidence 11 11133333333321 123444444 57776421 116899999998999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 040741 420 DRAIELTVKQVEKLRE 435 (457)
Q Consensus 420 d~~~~~l~~~~~~~~~ 435 (457)
|+++++|+++++++..
T Consensus 387 ~~~~~~l~~~l~~~~~ 402 (406)
T PRK12381 387 TTGLDRFARACERFVS 402 (406)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999987643
No 276
>PLN02624 ornithine-delta-aminotransferase
Probab=99.87 E-value=5.7e-20 Score=186.13 Aligned_cols=325 Identities=14% Similarity=0.143 Sum_probs=204.6
Q ss_pred CCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHH
Q 040741 56 GRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATE 129 (457)
Q Consensus 56 ~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~ 129 (457)
.+.-|+|+.+. +...|++.+++.+.+.+.. ...+ . -..+...++.+.|+++++.+ .++|+++|++
T Consensus 73 dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~-~~~~---~---~~~~~~~~la~~L~~~~~~~--~~~f~~SGse 143 (474)
T PLN02624 73 EGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLT-LSSR---A---FYNDKFPEFAEYLTSMFGYD--MVLPMNTGAE 143 (474)
T ss_pred CCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcC-Cccc---c---cCCHHHHHHHHHHHhhcCCC--eEEEeCChHH
Confidence 44467887543 2458999999999997642 1111 0 11256778999999998754 5999999999
Q ss_pred HHHHHHHHhhhhh-cC---C-C-CEEEEcCC-CCcchHHHHHHHHhc----Cc-----EEEEEeCCCCCCCCHHHHHHhc
Q 040741 130 SNNVSIKGVMHFY-KD---K-K-RHVITTQT-EHKCVLDSCRHLQQE----GF-----EITYLPVGADGIVNLDELRAAI 193 (457)
Q Consensus 130 a~~~al~~~~~~~-~~---~-g-~~vi~~~~-~h~~~~~~~~~~~~~----G~-----~v~~v~~~~~~~~d~~~le~~i 193 (457)
|++.|++....+. .. + + ..|+.... .|.....+....... ++ .+..++.+ |++.+++.+
T Consensus 144 A~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l 218 (474)
T PLN02624 144 GVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFG-----DLDALEKIF 218 (474)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCC-----CHHHHHHHH
Confidence 9999999665431 11 1 2 34555444 455444443321100 10 12233322 789999888
Q ss_pred C---CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCC----cccCCCCcccEEEeccccccC
Q 040741 194 R---PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKI----PVDVEKWNVSLMSLSGHKIYG 261 (457)
Q Consensus 194 ~---~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~----~~~~~~~~~Di~~~s~~K~~g 261 (457)
+ +++++|+++.+++++|.+.| +++|.++|++||+++|+|++|. +|.. ..+.....+|++++| |.+|
T Consensus 219 ~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv~ls--K~lg 296 (474)
T PLN02624 219 EEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDVVILG--KALG 296 (474)
T ss_pred HhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCCEEEec--cccc
Confidence 5 45789999999999999988 9999999999999999999997 3311 112233457888765 9554
Q ss_pred C--CCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhc---
Q 040741 262 P--KGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEK--- 336 (457)
Q Consensus 262 ~--~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~--- 336 (457)
. ..+|+++++++....+.+...+ ... ..++..+++..++++.+.+ ..+.++..++.+++++.|.+.
T Consensus 297 gG~~pigav~~~~~i~~~~~~~~~~------~T~-~g~pl~~aaa~aaLe~l~~--~~l~~~~~~~~~~l~~~L~~l~~~ 367 (474)
T PLN02624 297 GGVIPVSAVLADKDVMLCIKPGEHG------STF-GGNPLASAVAMAALQVVQD--EKLAERSAKLGQELRDQLQKIQKQ 367 (474)
T ss_pred CCCCcceeeeecHHHHhHhccCCcC------CCC-CCCHHHHHHHHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHh
Confidence 3 2489999887655444332211 111 3566667777778877654 234455556666666655441
Q ss_pred CCC-eEEeCCCCCcccceEEEEEccc-----cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEE
Q 040741 337 LDG-VVVNGSMERRYIGNLNLSFAYV-----EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRF 408 (457)
Q Consensus 337 ~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi 408 (457)
++. +..+. ..+.++.+.+... ...++...| +||.+.++. .+.|||
T Consensus 368 ~~~~i~~vr----g~G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~p~~-----------------------~~~lR~ 420 (474)
T PLN02624 368 FPKLIKEVR----GRGLLNAVVLNSPKLGPVSAYDVCLKLKERGLLAKPTH-----------------------DTIIRL 420 (474)
T ss_pred CCCceEEEE----eeEEEEEEEecCCCcChHHHHHHHHHHHhCCeEEecCC-----------------------CCEEEE
Confidence 332 21111 1133334444321 123444444 577765431 278999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 409 GIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 409 ~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
+++..++++||++++++|+++++.
T Consensus 421 ~p~l~~t~e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 421 APPLSISEDELQECSKALSDVLEH 444 (474)
T ss_pred ECCccCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988754
No 277
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.87 E-value=9.3e-20 Score=182.87 Aligned_cols=339 Identities=15% Similarity=0.138 Sum_probs=211.0
Q ss_pred CCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHH
Q 040741 56 GRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATE 129 (457)
Q Consensus 56 ~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~ 129 (457)
.+.-|||+.+. +..+|++.+++.+.+...... .. .++ ..+...++.+.|.++++...+.+.|+++|++
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~-~~----~~~-~~~~~~~la~~l~~~~p~~~~~v~f~~sGse 113 (423)
T PRK05964 40 DGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHV-IF----AGF-THEPAERLAQRLVALTPGGLDHVFFSDSGSV 113 (423)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCc-cc----ccc-CCHHHHHHHHHHHHhCCCCCCEEEEeCCcHH
Confidence 45568887543 356899999999998753211 00 011 1245567888888887533456999999999
Q ss_pred HHHHHHHHhhhhhc----CCCCEEEEcCCCCcchHHHHHHH-HhcC---------cEEEEEeCCCC--CCCCHHHHHHhc
Q 040741 130 SNNVSIKGVMHFYK----DKKRHVITTQTEHKCVLDSCRHL-QQEG---------FEITYLPVGAD--GIVNLDELRAAI 193 (457)
Q Consensus 130 a~~~al~~~~~~~~----~~g~~vi~~~~~h~~~~~~~~~~-~~~G---------~~v~~v~~~~~--~~~d~~~le~~i 193 (457)
|++.|++..+.+.. ..+.+||.....|.+.......+ .... ..+..++.+.+ ...+++++++.+
T Consensus 114 A~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l 193 (423)
T PRK05964 114 AVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALL 193 (423)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHH
Confidence 99999998775531 12456766555554444333322 1100 11233333321 112278888888
Q ss_pred C---CCceEEEEec-cccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCC--cc--cCCCCcccEEEecccccc
Q 040741 194 R---PDTGLISVMA-VNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKI--PV--DVEKWNVSLMSLSGHKIY 260 (457)
Q Consensus 194 ~---~~t~li~i~~-~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~--~~--~~~~~~~Di~~~s~~K~~ 260 (457)
. ++...|+++. ++...|...+ +++|.++|++||+++|+|++|. +|.. .+ ......+|+++++ |.+
T Consensus 194 ~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~pDi~~~~--K~l 271 (423)
T PRK05964 194 EKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSPDIMCLS--KGL 271 (423)
T ss_pred HhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCCCCCeeeee--hhh
Confidence 4 4567888887 5777887775 8999999999999999999985 4321 11 2222357887655 954
Q ss_pred -CC-CCceEEEEecCCCccccccccCCccccccccC--CCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhc
Q 040741 261 -GP-KGVGALYMRRRPRIRVEPLINGGGQERGIRSG--TLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEK 336 (457)
Q Consensus 261 -g~-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~--t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 336 (457)
|+ .++|+++.+++..+.+.... .+. .....+ ..++..+++..++++.+++ +...++.+++.+++++.|++
T Consensus 272 ~gG~~p~~av~~~~~i~~~~~~~~-~~~--~~~~~~T~~~np~~~aaa~a~l~~l~~--~~~~~~~~~~g~~l~~~l~~- 345 (423)
T PRK05964 272 TGGYLPLAATLCTAEIFEAFYSDD-RAK--AFMHSPSYTANPLACAAANASLDLFED--EPVLERVAALSAGLAEGLEP- 345 (423)
T ss_pred hcCcccceEEEEcHHHHHhhhcCC-ccc--ccccCCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHh-
Confidence 33 35899998877655543210 000 001112 3567777778788887765 35667888888888888876
Q ss_pred CCCeEEeCCCCCcccceEEEEEcccc----chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEec
Q 040741 337 LDGVVVNGSMERRYIGNLNLSFAYVE----GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGI 410 (457)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~ 410 (457)
+.....+.+ ....+.++.+.+...+ ...+...+ +||.+.+. .+.|||++
T Consensus 346 l~~~~~i~~-vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~~~Gv~v~~~------------------------~~~lR~~p 400 (423)
T PRK05964 346 FRDLPGVAD-VRVLGAIGAVELDRPVLERDGPALRAFALERGVLLRPL------------------------GNTIYLMP 400 (423)
T ss_pred hccCCCeEE-eecccEEEEEEeccCcchhHHHHHHHHHHHCCeEEEec------------------------CCEEEEeC
Confidence 422211111 1122444555664322 23444444 57766431 15899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Q 040741 411 GRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 411 ~~~~t~edid~~~~~l~~~~~~~ 433 (457)
+..+|++|||+++++++++++++
T Consensus 401 ~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 401 PYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred CcccCHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999998764
No 278
>PLN02368 alanine transaminase
Probab=99.87 E-value=5.4e-20 Score=182.55 Aligned_cols=228 Identities=16% Similarity=0.177 Sum_probs=167.6
Q ss_pred HHHHHHHHHHHHh----C--CCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEE
Q 040741 102 AVETARSQIADLI----G--ASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITY 175 (457)
Q Consensus 102 ~~~~~~~~la~~~----g--~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~ 175 (457)
...++|+.+++++ | +++++|++|+|+++++.+++.++.. ++||.|++..+.|+.+...++.. |.+++.
T Consensus 108 G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~---~pGd~Vli~~P~Y~~y~~~~~~~---g~~~v~ 181 (407)
T PLN02368 108 GLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIR---GEKDGVLVPVPQYPLYSATISLL---GGTLVP 181 (407)
T ss_pred CCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcC---CCCCEEEEeCCCCccHHHHHHHc---CCEEEE
Confidence 3445666666665 6 4678899999999999999988762 58999999999999999888776 999999
Q ss_pred EeCCC--CCCCCHHHHHHhcCC------CceEEEEeccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCCC----
Q 040741 176 LPVGA--DGIVNLDELRAAIRP------DTGLISVMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKI---- 240 (457)
Q Consensus 176 v~~~~--~~~~d~~~le~~i~~------~t~li~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~---- 240 (457)
++.+. ++.+|++++++++++ +++++++++++||||.+++ +++|+++|++||++||+|++|.--..
T Consensus 182 v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~ 261 (407)
T PLN02368 182 YYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDER 261 (407)
T ss_pred EecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCC
Confidence 98864 357899999999874 6899999999999999988 66788889999999999999864221
Q ss_pred cc-c-------CC----CCcccEEEecccccc-CCCC--ceEEEE---ecCCCccccccccCCccccccccCCCChhHHH
Q 040741 241 PV-D-------VE----KWNVSLMSLSGHKIY-GPKG--VGALYM---RRRPRIRVEPLINGGGQERGIRSGTLPTPLIV 302 (457)
Q Consensus 241 ~~-~-------~~----~~~~Di~~~s~~K~~-g~~G--~G~l~~---~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~ 302 (457)
+. . +. ..+.-+++.|+||.| |.+| +||+++ +++.++++..... .. .+++.....
T Consensus 262 ~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~-------~~-~~~~~~~Q~ 333 (407)
T PLN02368 262 PFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVAS-------IA-LSPNVSGQI 333 (407)
T ss_pred CcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhc-------cc-CCCCcHHHH
Confidence 11 1 10 112347788999976 6555 899985 4444444433211 11 134555555
Q ss_pred HHHHHHHH----------HHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeC
Q 040741 303 GFGSACEI----------AKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNG 344 (457)
Q Consensus 303 al~~al~~----------~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 344 (457)
++.++++. ..+++.++.+.++++++.+.+.|.+ ++++.+..
T Consensus 334 aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~-~~g~~~~~ 384 (407)
T PLN02368 334 FMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNS-CKNVVCNF 384 (407)
T ss_pred HHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCeEeCC
Confidence 55566642 1223456778889999999999999 88987755
No 279
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.87 E-value=5.3e-19 Score=175.09 Aligned_cols=323 Identities=16% Similarity=0.169 Sum_probs=201.7
Q ss_pred CCcEEecCCCCC-----CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCC-cEEEeCChHH
Q 040741 56 GRPLYLDMQATT-----PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPK-EIIFTSGATE 129 (457)
Q Consensus 56 ~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~-~i~~t~g~T~ 129 (457)
.+.-|+|+.+.. ...|++.+++.+.+.....++. ....++++.+++.+...++ .++|++|||+
T Consensus 27 dg~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~~~~~~-----------~~~~~~~~~la~~l~~~~~~~~~~~~SGse 95 (375)
T PRK04260 27 DGKKYLDFSSGIGVTNLGFHPQVQQALQKQAGLIWHSPN-----------LYLNSLQEEVAQKLIGDKDYLAFFCNSGAE 95 (375)
T ss_pred CCCEEEECCCCcccccCCCCHHHHHHHHHHHHhcCcccC-----------ccCCHHHHHHHHHHhcCcCCEEEEcCccHH
Confidence 344577776541 2388999999999876433321 1234566677776543334 3789999999
Q ss_pred HHHHHHHHhhhhhcCCCCEEEE-cCCCCcchHHHHHHHHhc----CcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEec
Q 040741 130 SNNVSIKGVMHFYKDKKRHVIT-TQTEHKCVLDSCRHLQQE----GFEITYLPVGADGIVNLDELRAAIRPDTGLISVMA 204 (457)
Q Consensus 130 a~~~al~~~~~~~~~~g~~vi~-~~~~h~~~~~~~~~~~~~----G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~ 204 (457)
|+..+++.+..+ .++++|++ ...+|.+...+....... +..+........-..|++.+++++++++++|++++
T Consensus 96 A~~~Al~~ar~~--~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~~~~a~vi~e~ 173 (375)
T PRK04260 96 ANEAAIKIARKA--TGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVNKNTAAVMLEL 173 (375)
T ss_pred HHHHHHHHHHHh--cCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcCCCeEEEEECC
Confidence 999999987643 23455555 566787777765443110 11000000000012489999999988889999999
Q ss_pred cccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCC--ccc--CCCCcccEEEeccccccCC-CCceEEEEecCC
Q 040741 205 VNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKI--PVD--VEKWNVSLMSLSGHKIYGP-KGVGALYMRRRP 274 (457)
Q Consensus 205 ~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~--~~~--~~~~~~Di~~~s~~K~~g~-~G~G~l~~~~~~ 274 (457)
+++++|.+.+ ++++.++|+++|+++++|++|. +|.. ... .....+|++ |++|.+|+ -.+|+++++++.
T Consensus 174 v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~~~ 251 (375)
T PRK04260 174 VQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIF--TLAKGLANGVPVGAMLAKSSL 251 (375)
T ss_pred eECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCCEE--EecccccCCcceEEEEEcHHH
Confidence 9999998866 8999999999999999999985 2211 111 122346765 66796653 238999999876
Q ss_pred CccccccccCCccccccccCCCChhHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccc
Q 040741 275 RIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKK--EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIG 352 (457)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 352 (457)
.+.+...... .....++..++++.++++.... .+++..+..+.+++.+.+.+.+ .+.+..+.. .+.
T Consensus 252 ~~~~~~~~~~-------~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~----~g~ 319 (375)
T PRK04260 252 GGAFGYGSHG-------STFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQD-KETVTTVRG----LGY 319 (375)
T ss_pred HhhcCCCCCC-------CCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhh-CCCeeEEec----cce
Confidence 5554322111 1123455566666667766653 2444455555555555555555 333222211 244
Q ss_pred eEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Q 040741 353 NLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQ 429 (457)
Q Consensus 353 ~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~ 429 (457)
++.+.+. .+...+...+ +||.+.+. ..+.+||+++..++++|+++++++++++
T Consensus 320 ~~~~~~~-~~~~~~~~~l~~~Gi~v~~~-----------------------~~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 320 MIGIETT-ADLSQLVEAARDKGLIVLTA-----------------------GTNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred EEEEEec-CcHHHHHHHHHhCCCEEecC-----------------------CCCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 4445542 3345666665 67776432 1168999999999999999999999875
No 280
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.87 E-value=7.2e-19 Score=171.67 Aligned_cols=338 Identities=14% Similarity=0.143 Sum_probs=219.8
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCC-CCCcEEEeCCh
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGA-SPKEIIFTSGA 127 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~-~~~~i~~t~g~ 127 (457)
..+-.|||+.+. +..+|.|.+|+.+++....-. +. .+ ...+...++.+.|.+++.. ..+.++|+++|
T Consensus 53 vdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~-~~-~~----~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sG 126 (447)
T COG0160 53 VDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHT-HT-RD----LYYEPYVELAEKLTALAPGSGLKKVFFGNSG 126 (447)
T ss_pred CCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcc-cC-Cc----ccchhHHHHHHHHHHhCCcccCCeEEecCCc
Confidence 456678888772 257899999999998765311 11 11 1115667777888887776 45679999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHH-----hcC-----cEEEEEeCCCC--C----------CCC
Q 040741 128 TESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQ-----QEG-----FEITYLPVGAD--G----------IVN 185 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~-----~~G-----~~v~~v~~~~~--~----------~~d 185 (457)
|+|+++|++....+. ++...|......|.....+..... ..| -.+..+|-+.. + .-.
T Consensus 127 aeA~E~AiKiAr~~T-gr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~ 205 (447)
T COG0160 127 AEAVEAAIKIARAYT-GRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDA 205 (447)
T ss_pred HHHHHHHHHHHHHHh-CCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHH
Confidence 999999999777543 444455556666777766655431 111 12455554411 1 112
Q ss_pred HHHHHHhcC------CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhhcCCC---cccCCCC--ccc
Q 040741 186 LDELRAAIR------PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQALGKI---PVDVEKW--NVS 250 (457)
Q Consensus 186 ~~~le~~i~------~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~~g~~---~~~~~~~--~~D 250 (457)
.+.+++.+. .+.+.++++.++...|.+.| ++++.++|++||+++|+|++|..... .+.+..+ .+|
T Consensus 206 ~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PD 285 (447)
T COG0160 206 LEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPD 285 (447)
T ss_pred HHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCC
Confidence 344555442 24789999999999999877 89999999999999999999973211 2223322 489
Q ss_pred EEEecccc-ccCCCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 040741 251 LMSLSGHK-IYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRL 329 (457)
Q Consensus 251 i~~~s~~K-~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l 329 (457)
+++++ | +.|.-.+|+++.+++..+ ..+...++. ...|+..+++..+.++.+++ +.+.++..++.+++
T Consensus 286 ivt~a--K~ig~G~Pl~avv~r~ei~~-~~~g~~~~T-------f~GNpva~Aaa~AvL~vie~--e~L~~~a~~~G~~l 353 (447)
T COG0160 286 IVTLA--KSLGGGLPLSAVVGRAEIMD-WPPGGHGGT-------FGGNPVACAAALAVLDVIEE--ENLLERAAELGEYL 353 (447)
T ss_pred EEEec--ccccCCCceeEEeccHHhcc-cCCcccCCC-------CCcCHHHHHHHHHHHHHHHH--ccHHHHHHHHHHHH
Confidence 99888 9 444444899999987655 333333221 24566677777778887776 47778888888888
Q ss_pred HHHHhhcCCCeEEeCCCCCcccceEEEEEccc-----cc----hHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCC
Q 040741 330 LNGIKEKLDGVVVNGSMERRYIGNLNLSFAYV-----EG----ESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVD 398 (457)
Q Consensus 330 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~ 398 (457)
++.|.+....+.++++. ...+-++.+.+... .. ..+...+ +|+.+.... .
T Consensus 354 ~~~L~~l~~~~~~IgdV-RG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G-----------------~- 414 (447)
T COG0160 354 RDRLEELQEKHPLIGDV-RGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTCG-----------------P- 414 (447)
T ss_pred HHHHHHHHhhcCceecc-cccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEeccC-----------------C-
Confidence 88876522233344432 22344555555321 11 1223332 565543211 1
Q ss_pred ccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 399 EDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 399 ~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
..+.|||.+....++|++|.+++.|++++++.
T Consensus 415 ---~~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 415 ---HGNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred ---CCcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 12899999999999999999999999999864
No 281
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.86 E-value=2.4e-20 Score=177.28 Aligned_cols=302 Identities=15% Similarity=0.140 Sum_probs=213.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHH-HhcCcEEEEEeC
Q 040741 100 EVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHL-QQEGFEITYLPV 178 (457)
Q Consensus 100 ~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~-~~~G~~v~~v~~ 178 (457)
.+....+++.++++-|+.. ++..++|..|+..++..+. ..+++++.....|......++.+ ...|.+..+++.
T Consensus 76 nPt~~~le~~iaal~ga~~--~l~fsSGmaA~~~al~~L~----~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~ 149 (409)
T KOG0053|consen 76 NPTRDVLESGIAALEGAAH--ALLFSSGMAAITVALLHLL----PAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDV 149 (409)
T ss_pred CCchHHHHHHHHHHhCCce--EEEecccHHHHHHHHHHhc----CCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeech
Confidence 4677789999999999865 8888889999999999999 89999999999999988877754 567999999988
Q ss_pred CCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEecccc
Q 040741 179 GADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHK 258 (457)
Q Consensus 179 ~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K 258 (457)
+ |++.+++++++++++|.++.|.||+..+.++++|+++||++|+++++|.+.+.+ .-.+.-.+|+||++-|.+|
T Consensus 150 ~-----~~~~~~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p-~~~~pL~lGADIV~hSaTK 223 (409)
T KOG0053|consen 150 D-----DLKKILKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSP-YNQDPLPLGADIVVHSATK 223 (409)
T ss_pred h-----hHHHHHHhhccCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcc-cccChhhcCCCEEEEeeee
Confidence 8 899999999999999999999999999999999999999999999999998876 3445566789999999999
Q ss_pred ccCCCC---ceEEEEe-cCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHh
Q 040741 259 IYGPKG---VGALYMR-RRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIK 334 (457)
Q Consensus 259 ~~g~~G---~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~ 334 (457)
++|.-. .|.++++ .+...++...... ..+++++..+.-+...++ .+.-++++..+++..+...|+
T Consensus 224 yi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~-------lg~~~~p~~~~ll~Rglk----tl~lRi~~~~ena~~~A~~Le 292 (409)
T KOG0053|consen 224 YIGGHSDVIGGSVVLNSEELASRLKFLQED-------LGWCEDPFDLFLLSRGLK----TLHLRINKHSENALKIALLLE 292 (409)
T ss_pred eecCCcceeeeEEecCcHHHHHHHHHHHHH-------hcCCCCHHHHHHHhcCcc----hhhhhHHHHHHHHHHHHHHhh
Confidence 766433 5777776 3333333333321 122555444443322221 244555666677777777887
Q ss_pred hcCCCeE-EeCC--CC-----------CcccceEEEEEccc--cchHHHhccc--CeEecccCccCCCCC-------Chh
Q 040741 335 EKLDGVV-VNGS--ME-----------RRYIGNLNLSFAYV--EGESLLMGLK--EVAVSSGSACTSASL-------EPS 389 (457)
Q Consensus 335 ~~~~~~~-~~~~--~~-----------~~~~~~~~~~~~~~--~~~~~~~~l~--~i~~~~g~~~~~~~~-------~~~ 389 (457)
. .|.++ ++-+ +. ....+.+.+...+. ...++...|+ -.+.+-|...+..+. .+.
T Consensus 293 ~-~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~~~~~a~kf~~~LK~~~~a~SlG~~eSL~~~p~~mth~~~~ 371 (409)
T KOG0053|consen 293 A-HPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFGNEEHAKKFYDALKLFTKAPSLGGNESLAEPPAIMTHASEL 371 (409)
T ss_pred h-CCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEEEcCCHHHHHHHHHhhhhhhcccCcCccchhhcchhhhccCCCH
Confidence 7 56665 2221 10 11123233333322 2234555553 244455554332211 122
Q ss_pred HHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 390 YVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 390 ~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
-...+.|+++ +.||+|++. |++|.+++.+.++++.+
T Consensus 372 e~~~~~Gi~~----~LVRvSVGi----Ed~~dL~~d~~~Al~~~ 407 (409)
T KOG0053|consen 372 EEREKFGIDP----NLVRVSVGI----EDIEDLIKDFQQALEKA 407 (409)
T ss_pred HHHHhcCCCC----CcEEEEecc----CCHHHHHHHHHHHHHhh
Confidence 2344677776 899999995 89999999999988765
No 282
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.86 E-value=1.4e-18 Score=177.58 Aligned_cols=363 Identities=15% Similarity=0.123 Sum_probs=238.0
Q ss_pred EEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHh
Q 040741 59 LYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGV 138 (457)
Q Consensus 59 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~ 138 (457)
-|+.+-.+.+.++.++-.+...+. |+....+..+..+...-.++-+++++++|.+.....||+|||+||..++...
T Consensus 85 ry~ghm~~~~~~paila~~~a~~~----N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~A 160 (608)
T TIGR03811 85 RYWGHMNSETLMPAILAYNYAMLW----NGNNVAYESSPATSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYA 160 (608)
T ss_pred ceEEECcCCCCHHHHHHHHHHHHh----CCCCCccccCchHHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHH
Confidence 578777777777777766555543 3333344445566677788999999999998767899999999999988877
Q ss_pred hhhhc------C--C---------------------------------------------C-CEEEEcCCCCcchHHHHH
Q 040741 139 MHFYK------D--K---------------------------------------------K-RHVITTQTEHKCVLDSCR 164 (457)
Q Consensus 139 ~~~~~------~--~---------------------------------------------g-~~vi~~~~~h~~~~~~~~ 164 (457)
+.... . + . -.+++++..|.|+.+++.
T Consensus 161 R~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ 240 (608)
T TIGR03811 161 RNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAAD 240 (608)
T ss_pred HHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHH
Confidence 64210 0 0 0 058889989999999999
Q ss_pred HHHhcCc---EEEEEeCCCCCCCCHHHHHHhcCCC------ceEEEEeccccccccccChHHHHHHH---HhcCC--cEE
Q 040741 165 HLQQEGF---EITYLPVGADGIVNLDELRAAIRPD------TGLISVMAVNNEIGVIQPMEEIGQIC---KEFKI--PFH 230 (457)
Q Consensus 165 ~~~~~G~---~v~~v~~~~~~~~d~~~le~~i~~~------t~li~i~~~~~~~G~~~~l~~i~~l~---~~~~v--~li 230 (457)
.+ |+ +++.||++.++++|+++|+++|++. +-+|+.+...+.+|.+.|+++|+++| +++|+ ++|
T Consensus 241 il---GlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lH 317 (608)
T TIGR03811 241 II---GIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLH 317 (608)
T ss_pred Hc---CCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEe
Confidence 99 66 6899999999999999999988632 34577788888999999999999999 67888 699
Q ss_pred EehhhhcCCC--ccc--------------------C---------------CC-CcccEEEecccc-ccCCCCceEEEEe
Q 040741 231 TDAAQALGKI--PVD--------------------V---------------EK-WNVSLMSLSGHK-IYGPKGVGALYMR 271 (457)
Q Consensus 231 ~D~a~~~g~~--~~~--------------------~---------------~~-~~~Di~~~s~~K-~~g~~G~G~l~~~ 271 (457)
+|+|++.... -.+ + .. ..+|.+++.+|| .|-|.++|+++++
T Consensus 318 VDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~R 397 (608)
T TIGR03811 318 VDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQ 397 (608)
T ss_pred eeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEe
Confidence 9999986321 000 0 00 258999999999 5678899999999
Q ss_pred cCCCccc----cccccCCccc------cccccCCCChhHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHhhcC-
Q 040741 272 RRPRIRV----EPLINGGGQE------RGIRSGTLPTPLIVGFGSACEIA---KKEMDYDHKRITALHDRLLNGIKEKL- 337 (457)
Q Consensus 272 ~~~~~~~----~~~~~~~~~~------~~~~~~t~~~~~~~al~~al~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~- 337 (457)
+...... .++....+.. .....|+.+....+++-.+++.+ .+++.++.++.-++++++.+.|.+ .
T Consensus 398 d~~~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~-~~ 476 (608)
T TIGR03811 398 DIRMRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNN-LE 476 (608)
T ss_pred CHHHHHHHhcCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh-cc
Confidence 8632111 1222110000 00112232223344455566654 567999999999999999999987 3
Q ss_pred -----CCeEE--eCCCCCcccceEEEEEccc--cc----hHHHhcc-c------------CeEecccCccCCCC-CChhH
Q 040741 338 -----DGVVV--NGSMERRYIGNLNLSFAYV--EG----ESLLMGL-K------------EVAVSSGSACTSAS-LEPSY 390 (457)
Q Consensus 338 -----~~~~~--~~~~~~~~~~~~~~~~~~~--~~----~~~~~~l-~------------~i~~~~g~~~~~~~-~~~~~ 390 (457)
+.+.+ ..+++ .+++.|.+... +. .++...+ + .+.++...++.... -.|..
T Consensus 477 ~~~~~~~~el~~~~~pd---lniV~Fr~~~~g~~~l~~~n~ln~~i~~~~~~~~g~~~~~~~~~s~t~~~~~~yg~~~~~ 553 (608)
T TIGR03811 477 FKVGDKEIEVHPLTKPD---FNMVDYVFNEKGNDDLVKMNKLNHAFYDYASYVKGSIYNNEFITSHTDFAIPDYGDSPFA 553 (608)
T ss_pred cccCCCCeeEEecCCCC---cceEEEEEecCCCccHHHHHHHHHHHHHhhccccCCCCCcceEeeecccccchhhhhHHH
Confidence 33444 33332 56677776422 11 1222222 1 12222222221110 12233
Q ss_pred HHHHcCCCcc-----CCCCeEEEecCC--CCCHHHHHHHHHHHHHHHHH
Q 040741 391 VLRALGVDED-----MAHTSIRFGIGR--FTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 391 ~l~~~g~~~~-----~~~~~iRi~~~~--~~t~edid~~~~~l~~~~~~ 432 (457)
..+.+|+.++ ..-..+|-++.. .++.+.++.+++.|++++.+
T Consensus 554 ~~~~~~~~~~~~~~~~~~~~lr~~~m~p~~~~~~~~~~~~~~~~~~~~~ 602 (608)
T TIGR03811 554 FVNSLGFSDEEWQRAGKVTILRASVMTPYMNDKENFDEYAPKIKAAMQE 602 (608)
T ss_pred HHHHcCCChhhhccCCceEEEEEEecCcccCChhhHHHHHHHHHHHHHH
Confidence 4566787744 344578888643 35568899999998888754
No 283
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.86 E-value=3.9e-19 Score=178.68 Aligned_cols=339 Identities=17% Similarity=0.176 Sum_probs=214.0
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChH
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGAT 128 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T 128 (457)
..+.-|||+.+. +..+|++.+|+.+.+....-.. . +...+...++.+.|++++..+.+.++|++|||
T Consensus 79 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~---~----~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGs 151 (459)
T PRK11522 79 TQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHS---Q----ELLDPLRAMLAKTLAALTPGKLKYSFFCNSGT 151 (459)
T ss_pred CCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcccc---c----ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCch
Confidence 445568887554 3578999999999987542111 0 11135667788888888765445799999999
Q ss_pred HHHHHHHHHhhhhhcCC-CCEEEEcCC-CCcchHHHHHHHHhcCcEEEEEeCCCC----CCCCHHHHHHhcC------CC
Q 040741 129 ESNNVSIKGVMHFYKDK-KRHVITTQT-EHKCVLDSCRHLQQEGFEITYLPVGAD----GIVNLDELRAAIR------PD 196 (457)
Q Consensus 129 ~a~~~al~~~~~~~~~~-g~~vi~~~~-~h~~~~~~~~~~~~~G~~v~~v~~~~~----~~~d~~~le~~i~------~~ 196 (457)
+|++.|++....+..++ +..||.... .|.....+............+.+..++ ...|+++++++++ ++
T Consensus 152 EAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 231 (459)
T PRK11522 152 ESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDD 231 (459)
T ss_pred HHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCc
Confidence 99999999877654333 345666554 555554443332111111001111000 0127788888775 35
Q ss_pred ceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc--ccC--CCCcccEEEeccccccC-C-CCc
Q 040741 197 TGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP--VDV--EKWNVSLMSLSGHKIYG-P-KGV 265 (457)
Q Consensus 197 t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~--~~~--~~~~~Di~~~s~~K~~g-~-~G~ 265 (457)
...|+++.+....|.+.| ++++.++|++||+++|+|+++. +|... +.. ....+|+++++ |.+| . ..+
T Consensus 232 iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~g--K~lggG~~Pi 309 (459)
T PRK11522 232 VAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDILCLA--KALGGGVMPI 309 (459)
T ss_pred EEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCCEEEec--hhhhCCCccc
Confidence 678999999999999888 9999999999999999999985 33221 111 12247888655 9544 2 248
Q ss_pred eEEEEecCCCccccccccCCccccccccCCC--ChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhc---CCCe
Q 040741 266 GALYMRRRPRIRVEPLINGGGQERGIRSGTL--PTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEK---LDGV 340 (457)
Q Consensus 266 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~--~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~ 340 (457)
|+++++++..+.+.... ....+|. ++..+++..++++.+++ +...++.+++.+++++.|++. +|..
T Consensus 310 gav~~~~~i~~~~~~~~-------~~~~~T~~gnp~~~Aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~ 380 (459)
T PRK11522 310 GATIATEEVFSVLFDNP-------FLHTTTFGGNPLACAAALATINVLLE--QNLPAQAEQKGDYLLDGFRQLAREYPDL 380 (459)
T ss_pred eeEEEcHHHHHHhccCC-------cccCCCCCCCHHHHHHHHHHHHHHhc--chHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99998876544332110 0112233 67777777788888876 356778888888888887761 2211
Q ss_pred EEeCCCCCcccceEEEEEcccc-chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHH
Q 040741 341 VVNGSMERRYIGNLNLSFAYVE-GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEA 417 (457)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~e 417 (457)
+++. ...+.++.+.+...+ ...+...+ +||.+.... ...+.+||.++..+|++
T Consensus 381 --i~~V-rG~Gl~~giel~~~~~~~~i~~~l~~~Gvl~~~~~---------------------~~~~~lr~~Ppl~~t~~ 436 (459)
T PRK11522 381 --VQEA-RGKGMLMAIEFVDNEIGYNFASEMFRQRVLVAGTL---------------------NNAKTIRIEPPLTLTIE 436 (459)
T ss_pred --eeeE-EeceeEEEEEecCchHHHHHHHHHHHCCeEEEecC---------------------CCCCEEEEECCccCCHH
Confidence 1110 112444455553221 23344444 577764311 11278999999999999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 040741 418 EVDRAIELTVKQVEKLRE 435 (457)
Q Consensus 418 did~~~~~l~~~~~~~~~ 435 (457)
|||+++++++++++++..
T Consensus 437 ~id~~l~~l~~~l~~~~~ 454 (459)
T PRK11522 437 QCEQVLKAARKALAAMRV 454 (459)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999987754
No 284
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.86 E-value=2e-20 Score=181.08 Aligned_cols=329 Identities=19% Similarity=0.245 Sum_probs=199.0
Q ss_pred CCCCCCCHHHHHHHHHHHhhcc--CCCCCCccchhhhHH-HHHHHHHHHHHHHhCCCCCc---EEEeCChHHHHHHHHHH
Q 040741 64 QATTPVDPRVLDAMLPFYLSRY--GNPHSRTHLFGWESE-VAVETARSQIADLIGASPKE---IIFTSGATESNNVSIKG 137 (457)
Q Consensus 64 ~~~~~~~~~v~~a~~~~~~~~~--~~p~~~~~~~~~~~~-~~~~~~~~~la~~~g~~~~~---i~~t~g~T~a~~~al~~ 137 (457)
++.+.+++.+++++...+.+.+ |.|..+.+ .|.... +...-+++++.++||+++++ -+=.-||+.|+..++.+
T Consensus 27 aSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy-~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~a 105 (399)
T PF00464_consen 27 ASENYMSPAVREALGSDLTNKYAEGYPGKRYY-GGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMA 105 (399)
T ss_dssp TT-----HHHHHHHTSGGGGS-TTEETTEESS-SSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHH
T ss_pred CcccccCHHHHHHhCCcceeeccccCCCcccc-cCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHH
Confidence 3556889999999999888766 35554333 333333 44444788999999998553 23344688999999999
Q ss_pred hhhhhcCCCCEEEEcCCCCcchHH---HHHH----HHhcCcEEEEEeCC-CCCCCCHHHHHHhcC-CCceEEEEeccccc
Q 040741 138 VMHFYKDKKRHVITTQTEHKCVLD---SCRH----LQQEGFEITYLPVG-ADGIVNLDELRAAIR-PDTGLISVMAVNNE 208 (457)
Q Consensus 138 ~~~~~~~~g~~vi~~~~~h~~~~~---~~~~----~~~~G~~v~~v~~~-~~~~~d~~~le~~i~-~~t~li~i~~~~~~ 208 (457)
++ +|||.|+..+..|.+... .... .....+++..++++ .++.+|.+++++.++ .++++|++....+
T Consensus 106 Ll----~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y- 180 (399)
T PF00464_consen 106 LL----KPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASSY- 180 (399)
T ss_dssp HT-----TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SST-
T ss_pred HH----hhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchhc-
Confidence 99 899999987766544432 1111 01115688888888 778999999999886 4789998876543
Q ss_pred cccccChHHHHHHHHhcCCcEEEehhhhcC-----CCcccCCCCcccEEEecccc-ccCCCCceEEEEec----------
Q 040741 209 IGVIQPMEEIGQICKEFKIPFHTDAAQALG-----KIPVDVEKWNVSLMSLSGHK-IYGPKGVGALYMRR---------- 272 (457)
Q Consensus 209 ~G~~~~l~~i~~l~~~~~v~li~D~a~~~g-----~~~~~~~~~~~Di~~~s~~K-~~g~~G~G~l~~~~---------- 272 (457)
-...|+++++++|++.|.+++.|.+|-.| ..+-.+ ++ +|++++|.|| +.||.| |+|+.++
T Consensus 181 -~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~-~~-ADvvt~sThKtl~GPrg-giI~~~~~~~~~~~~~~ 256 (399)
T PF00464_consen 181 -PRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPF-PY-ADVVTGSTHKTLRGPRG-GIILTNKGSKNVDKKGK 256 (399)
T ss_dssp -SS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GC-CT-SSEEEEESSGGG-SSS--EEEEES-SEEEE-TTS-
T ss_pred -cCccCHHHHHHHHHhcCcEEEecccccccceehheecCcc-cc-ceEEEeeccccccccCc-eEEEEcCCccccCCccc
Confidence 35678999999999999999999999643 333333 33 8999999999 789996 9999882
Q ss_pred ----CCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCC
Q 040741 273 ----RPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSME 347 (457)
Q Consensus 273 ----~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 347 (457)
++.+++.....-+ ..|.+-...++++..++..+.. ++.+..+++.++++.|.+.|.+ .|+.+.....
T Consensus 257 ~~~~~l~~~I~~avfP~------~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~--~G~~v~~ggT 328 (399)
T PF00464_consen 257 EIDEELAEKIDSAVFPG------LQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQE--RGFKVVTGGT 328 (399)
T ss_dssp EEEHHHHHHHHHHHTTT------T-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH--TT-EEGGGS-
T ss_pred ccHHHHHHHhccccCCC------cccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhh--CCcEEEECCC
Confidence 2222332222111 1234556677888888877654 5789999999999999999999 6999986422
Q ss_pred CcccceEEEEEc--cccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCC----CCHHHH
Q 040741 348 RRYIGNLNLSFA--YVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRF----TTEAEV 419 (457)
Q Consensus 348 ~~~~~~~~~~~~--~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~----~t~edi 419 (457)
-...+.+.+. +.++......| .||.+........ ........|||+.... ..++|+
T Consensus 329 --d~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d--------------~~~~~~sGlRlGT~~lT~rG~~e~dm 392 (399)
T PF00464_consen 329 --DNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGD--------------RSPFVPSGLRLGTPALTRRGMKEEDM 392 (399)
T ss_dssp --SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTT--------------STTTT-SEEEEESHHHHHTT--HHHH
T ss_pred --CCCeEEEEecccccchHHHHHHHHhcCeeecccccCCC--------------CCCCCCCEEEECCHHHHhCCCCHHHH
Confidence 2444555553 35566666666 4666643211100 1112337899997554 457788
Q ss_pred HHHHHHH
Q 040741 420 DRAIELT 426 (457)
Q Consensus 420 d~~~~~l 426 (457)
+++.+.|
T Consensus 393 ~~iA~~I 399 (399)
T PF00464_consen 393 KEIAELI 399 (399)
T ss_dssp HHHHHHH
T ss_pred HHHHhhC
Confidence 7776653
No 285
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.85 E-value=2.9e-20 Score=162.61 Aligned_cols=162 Identities=24% Similarity=0.377 Sum_probs=136.3
Q ss_pred HHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchH-HHHHHHHhcCcEEEEEeCCCC
Q 040741 103 VETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVL-DSCRHLQQEGFEITYLPVGAD 181 (457)
Q Consensus 103 ~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~-~~~~~~~~~G~~v~~v~~~~~ 181 (457)
+.++++.++++++.+++++++++|||+|+.++++++. +++++|++..+.|++.. ..+. ..|.++..++.+.+
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~---~~g~~~~~v~~~~~ 74 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALL----GPGDEVIVDANGHGSRYWVAAE---LAGAKPVPVPVDDA 74 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhC----CCCCEEEEeecccceehhhHHH---hcCCEEEEeccCCC
Confidence 4678999999997666679999999999999999988 77899999999999888 5444 44999999998765
Q ss_pred CCCCH--HHHHHh-cCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcc---cCCCCcccEEEec
Q 040741 182 GIVNL--DELRAA-IRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPV---DVEKWNVSLMSLS 255 (457)
Q Consensus 182 ~~~d~--~~le~~-i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~---~~~~~~~Di~~~s 255 (457)
+..+. +.+++. ..++++++++++++|++|...|+++|.++|+++|+++|+|++++.+.... +....++|+++.|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~~s 154 (170)
T cd01494 75 GYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTFS 154 (170)
T ss_pred CccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEEEE
Confidence 54333 255443 35788999999999999999999999999999999999999999877765 4555679999999
Q ss_pred cccccCCCCceEEEEe
Q 040741 256 GHKIYGPKGVGALYMR 271 (457)
Q Consensus 256 ~~K~~g~~G~G~l~~~ 271 (457)
+||++|++|+|+++++
T Consensus 155 ~~K~~~~~~~G~l~~~ 170 (170)
T cd01494 155 LHKNLGGEGGGVVIVK 170 (170)
T ss_pred cccccCCCceEEEEeC
Confidence 9998877889999875
No 286
>PLN00144 acetylornithine transaminase
Probab=99.85 E-value=8.2e-19 Score=173.38 Aligned_cols=324 Identities=17% Similarity=0.171 Sum_probs=201.5
Q ss_pred CCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHH
Q 040741 56 GRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATE 129 (457)
Q Consensus 56 ~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~ 129 (457)
.+.-|+|+.+. +...|++.+++.+.+.... .... .+. .+...++.+.|.+..+. +.++|+++||+
T Consensus 13 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~-~~~~-----~~~-~~~~~~la~~l~~~~~~--~~v~f~~sGse 83 (382)
T PLN00144 13 EGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLA-HVSN-----VYH-TIPQVELAKRLVASSFA--DRVFFCNSGTE 83 (382)
T ss_pred CCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcC-Cccc-----ccc-CHHHHHHHHHHHhcCCC--CeEEEeCCcHH
Confidence 34457776433 3568999999999987531 1111 011 24556777777777653 46999999999
Q ss_pred HHHHHHHHhhhhhcCC-----------CCEEEEcCC-CCcchHHHHHHHHhcCc---------EEEEEeCCCCCCCCHHH
Q 040741 130 SNNVSIKGVMHFYKDK-----------KRHVITTQT-EHKCVLDSCRHLQQEGF---------EITYLPVGADGIVNLDE 188 (457)
Q Consensus 130 a~~~al~~~~~~~~~~-----------g~~vi~~~~-~h~~~~~~~~~~~~~G~---------~v~~v~~~~~~~~d~~~ 188 (457)
|++.|++....+...+ +.+||.... .|.....+......... .+..++.+ |+++
T Consensus 84 A~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~ 158 (382)
T PLN00144 84 ANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYG-----NLEA 158 (382)
T ss_pred HHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCC-----CHHH
Confidence 9999999877554321 245665554 55555444332211001 12233322 7899
Q ss_pred HHHhcC-CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhhc-CCC--cc--cCCCCcccEEEecccc
Q 040741 189 LRAAIR-PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQAL-GKI--PV--DVEKWNVSLMSLSGHK 258 (457)
Q Consensus 189 le~~i~-~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~~-g~~--~~--~~~~~~~Di~~~s~~K 258 (457)
+++++. .+.+.|+++.++++.|...+ +++|.++|++||+++|+|++++. |.. .+ +.....+|++++ +|
T Consensus 159 l~~~~~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PDi~t~--sK 236 (382)
T PLN00144 159 ARKLIQKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPDIMTL--AK 236 (382)
T ss_pred HHHhcCCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCCEEEe--cc
Confidence 999885 45788889989998555433 88999999999999999999873 222 11 123345785555 59
Q ss_pred ccC-CCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH----H
Q 040741 259 IYG-PKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNG----I 333 (457)
Q Consensus 259 ~~g-~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~----l 333 (457)
.++ .-.+|+++++++..+.+.+...+. ....++..++++.++++++++ ....++.+++.+++++. +
T Consensus 237 ~l~~G~pig~v~~~~~~~~~~~~~~~~~-------T~~~~pl~~aaa~a~l~~i~~--~~~~~~~~~~g~~l~~~l~~~~ 307 (382)
T PLN00144 237 PLAGGLPIGAVLVTEKVASAINPGDHGS-------TFAGGPLVCNAALAVLDKISK--PGFLASVAKKGEYLRELLRRKL 307 (382)
T ss_pred cccCCcceEEEEEcHHHHhccCCCCCCC-------CCCCCHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHHHHHHHHH
Confidence 443 334899999887766654322211 124455666667777888765 23334444444444444 4
Q ss_pred hhcCCCe-EEeCCCCCcccceEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEec
Q 040741 334 KEKLDGV-VVNGSMERRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGI 410 (457)
Q Consensus 334 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~ 410 (457)
.+ .|.+ .+.+ .+.++.+.+. .....+...+ +||.+.++.. .+.|||++
T Consensus 308 ~~-~~~~~~vrg-----~G~~~~l~l~-~~~~~~~~~~~~~Gv~i~~~~~----------------------~~~lrl~p 358 (382)
T PLN00144 308 GG-NPHVKEVRG-----VGLLVGIQLD-VPAGPLVDACRDSGLLVLTAGK----------------------GDVVRLVP 358 (382)
T ss_pred hh-CCCceeeec-----CceEEEEEec-CccHHHHHHHHHCCeEEeecCC----------------------CCEEEEeC
Confidence 44 3332 2222 2455555552 3344555544 6777754310 27999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Q 040741 411 GRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 411 ~~~~t~edid~~~~~l~~~~~~~ 433 (457)
+..+++++++.++++|+++++++
T Consensus 359 ~~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 359 PLVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred CCccCHHHHHHHHHHHHHHHHhc
Confidence 99888999999999999998754
No 287
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.85 E-value=1.2e-18 Score=176.86 Aligned_cols=343 Identities=19% Similarity=0.180 Sum_probs=209.3
Q ss_pred CCcEEecCCC------CCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhC-CCCCcEEEeCChH
Q 040741 56 GRPLYLDMQA------TTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIG-ASPKEIIFTSGAT 128 (457)
Q Consensus 56 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g-~~~~~i~~t~g~T 128 (457)
.+.-|+|+.+ -+..+|++.+++.+.+.... ..+. ..+ ...+...++.+.|.+++. .+.+.++|+++|+
T Consensus 87 dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~-~~~~---~~~-~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGs 161 (504)
T PLN02760 87 NGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLP-FYHS---FWN-RTTKPSLDLAKELLEMFTARKMGKVFFTNSGS 161 (504)
T ss_pred CCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhcc-ceec---ccc-cCcHHHHHHHHHHHhhcCCCCCCEEEEeCChH
Confidence 4456788655 22578999999999987531 1000 001 112566778888888753 3335699999999
Q ss_pred HHHHHHHHHhhhhh---cCC-CCEE-EEcCCCCcchHHHHHHHHh----cCc-----EEEEEeCCCCC------------
Q 040741 129 ESNNVSIKGVMHFY---KDK-KRHV-ITTQTEHKCVLDSCRHLQQ----EGF-----EITYLPVGADG------------ 182 (457)
Q Consensus 129 ~a~~~al~~~~~~~---~~~-g~~v-i~~~~~h~~~~~~~~~~~~----~G~-----~v~~v~~~~~~------------ 182 (457)
+|++.|++....+. +.+ +..| .....+|.....+...... .++ .+..++.+...
T Consensus 162 EA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 241 (504)
T PLN02760 162 EANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEF 241 (504)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHH
Confidence 99999999886543 111 2344 4555677776665543311 011 02222221100
Q ss_pred -CCCHHHHHHhcC----CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhh-hcCCCc--ccCC--CCc
Q 040741 183 -IVNLDELRAAIR----PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQ-ALGKIP--VDVE--KWN 248 (457)
Q Consensus 183 -~~d~~~le~~i~----~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~-~~g~~~--~~~~--~~~ 248 (457)
....+++++++. ++...|+++.+....|.+.| +++|.++|++||+++|+|+++ ++|... +... ...
T Consensus 242 ~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~ 321 (504)
T PLN02760 242 STRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIK 321 (504)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCC
Confidence 011245666663 35678999999988899988 999999999999999999999 565432 1111 224
Q ss_pred ccEEEeccccccCC--CCceEEEEecCCCccccccccCC-ccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 040741 249 VSLMSLSGHKIYGP--KGVGALYMRRRPRIRVEPLINGG-GQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITAL 325 (457)
Q Consensus 249 ~Di~~~s~~K~~g~--~G~G~l~~~~~~~~~~~~~~~~~-~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~ 325 (457)
+|+++++ |.+|. ..+|+++++++..+.+....... ....+..+ ..++..+++..++++.+++ +...++.+++
T Consensus 322 PDivtlg--K~lggG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~-~gnPl~~Aaala~Le~i~~--~~l~~~~~~~ 396 (504)
T PLN02760 322 PDLVSLA--KALSSAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTY-SGHPVSCAVALEALKIYKE--RNIPEHVNKI 396 (504)
T ss_pred CcEEEec--ccccCCccccceEeecHHHHhhhhcccccccCcccCCCC-CCCHHHHHHHHHHHHHHHh--CCHHHHHHHH
Confidence 7887766 95432 24788998877665553221100 00111222 3366777777788888876 3667888888
Q ss_pred HHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcccc------------chHHHhcc--cCeEecccCccCCCCCChhHH
Q 040741 326 HDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVE------------GESLLMGL--KEVAVSSGSACTSASLEPSYV 391 (457)
Q Consensus 326 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~ 391 (457)
.+++++.|++ +....++++ ....+.++.+.+.... ...+...+ +|+.+.+.
T Consensus 397 g~~l~~~L~~-l~~~~~v~~-vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~------------- 461 (504)
T PLN02760 397 APRFQDGIKA-FSGSPIIGE-IRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVA------------- 461 (504)
T ss_pred HHHHHHHHHH-HhcCCCeee-EEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEec-------------
Confidence 8888888876 422222211 1122444444442211 11122222 46655321
Q ss_pred HHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 392 LRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 392 l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
.+.+||++...+|++|||+++++++++++++.
T Consensus 462 -----------g~~lrl~Ppl~it~eeid~~~~~l~~al~~~~ 493 (504)
T PLN02760 462 -----------GDNIMMSPPLIITPEEVDELISIYGKALKATE 493 (504)
T ss_pred -----------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 15799999999999999999999999998763
No 288
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.85 E-value=1.6e-18 Score=174.55 Aligned_cols=337 Identities=14% Similarity=0.106 Sum_probs=207.0
Q ss_pred CCcEEecCCCCC------CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHH
Q 040741 56 GRPLYLDMQATT------PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATE 129 (457)
Q Consensus 56 ~~~i~l~~~~~~------~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~ 129 (457)
.+.-|+|+.+.- ..+|++.+++.+.+....-.+.. ....+...++.++|+++++-..+.++|++||++
T Consensus 41 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~------~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGse 114 (433)
T PRK08117 41 DGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSG------VIYYESILKLAEELAEITPGGLDCFFFSNSGAE 114 (433)
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCcccc------ccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHH
Confidence 344688865542 47899999999998753211100 012256788999999998433456999999999
Q ss_pred HHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHH-----hcCc-----EEEEEeCCCCCC------------CCHH
Q 040741 130 SNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQ-----QEGF-----EITYLPVGADGI------------VNLD 187 (457)
Q Consensus 130 a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~-----~~G~-----~v~~v~~~~~~~------------~d~~ 187 (457)
|++.+++....+ .++...|......|.....+..... ..+. .+..+|.+.... .|++
T Consensus 115 A~e~AlklAr~~-tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (433)
T PRK08117 115 AIEGALKLAKHV-TKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLR 193 (433)
T ss_pred HHHHHHHHHHHh-cCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHH
Confidence 999999965543 2333444455566777666543221 0011 123333321110 1566
Q ss_pred HHHHhcC-----CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhhc-CCC--cccCCCC--cccEEE
Q 040741 188 ELRAAIR-----PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQAL-GKI--PVDVEKW--NVSLMS 253 (457)
Q Consensus 188 ~le~~i~-----~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~~-g~~--~~~~~~~--~~Di~~ 253 (457)
++++.++ .+...|+++.+....|.+.| +++|.++|++||+++|+|++|+. |.. .+....+ .+|++
T Consensus 194 ~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~pDi~- 272 (433)
T PRK08117 194 DLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVPDIM- 272 (433)
T ss_pred HHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCCCCCEe-
Confidence 6777653 35789999999999999988 99999999999999999999973 211 1111122 35664
Q ss_pred eccccccCC-CCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 040741 254 LSGHKIYGP-KGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNG 332 (457)
Q Consensus 254 ~s~~K~~g~-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~ 332 (457)
+++|.+|+ -.+|+++++++..+.+.....+. ....++..+++..++++.++. +...++.+++.+++++.
T Consensus 273 -t~sK~lg~G~pigav~~~~~i~~~~~~~~~~~-------T~~~np~~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~ 342 (433)
T PRK08117 273 -TIAKGIASGLPLSAVVASKELMEQWPLGSHGT-------TFGGNPVACAAALATLEVIKE--EKLLDNANEMGAYALER 342 (433)
T ss_pred -ehhhhccCCCcceeEEEcHHHHhhccCCCCCC-------CCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHH
Confidence 66696552 23899999877655543222111 114466777777788887754 35666777777777777
Q ss_pred HhhcCC-CeEEeCCCCCcccceEEEEEcccc-------chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCC
Q 040741 333 IKEKLD-GVVVNGSMERRYIGNLNLSFAYVE-------GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMA 402 (457)
Q Consensus 333 l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~ 402 (457)
|.+ +. ...+..+ ....+.++.+.+...+ ...+...+ +||.+.+.. ..
T Consensus 343 L~~-l~~~~~~~~~-vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---------------------~~ 399 (433)
T PRK08117 343 LEV-LKEKHPVIGD-VRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCG---------------------NA 399 (433)
T ss_pred HHH-HHhcCCceee-eecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeecC---------------------CC
Confidence 765 21 1111111 1122334444442111 11222223 466553210 01
Q ss_pred CCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 403 HTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 403 ~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
.+.+||+++..+|+++|++++++|.++++++
T Consensus 400 ~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~ 430 (433)
T PRK08117 400 GNVLRMIPPLTVTKEEIDEGLDILDEALTEY 430 (433)
T ss_pred CCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 2799999999999999999999999999876
No 289
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.84 E-value=2.1e-18 Score=168.26 Aligned_cols=302 Identities=16% Similarity=0.117 Sum_probs=195.6
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHH-HHHHHhcCcEEEEEeC-
Q 040741 101 VAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDS-CRHLQQEGFEITYLPV- 178 (457)
Q Consensus 101 ~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~-~~~~~~~G~~v~~v~~- 178 (457)
+.+.++++.+++++|.+. +++|++||.|++++..... ++||.| +.++|.....+ +... |+.++-++.
T Consensus 71 ~s~~~lE~~va~~~G~~~--av~v~sGT~Al~ll~~l~l----~pGDeV--psn~~f~Tt~ahIe~~---Gav~vDi~~d 139 (450)
T TIGR02618 71 RNFYHLERTVRELYGFKY--VVPTHQGRGAENLLSQIAI----KPGDYV--PGNMYFTTTRYHQEKN---GATFVDIIID 139 (450)
T ss_pred CcHHHHHHHHHHHHCCCe--EEEcCCHHHHHHHHHHhCC----CCcCEE--CCceeHHHHHHHHHhC---CeEEEeeecc
Confidence 568899999999999876 9999999999988765555 899977 55666555554 4444 775444432
Q ss_pred ---------CCCCCCCHHHHHHhcCCC----ceEEEEecccccc-ccccC---hHHHHHHHHhcCCcEEEehhhhcCCCc
Q 040741 179 ---------GADGIVNLDELRAAIRPD----TGLISVMAVNNEI-GVIQP---MEEIGQICKEFKIPFHTDAAQALGKIP 241 (457)
Q Consensus 179 ---------~~~~~~d~~~le~~i~~~----t~li~i~~~~~~~-G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~~ 241 (457)
+.+|.+|+++|+++|+++ +.+|+++.++|.. |...| +++|.++|++||+.+|.|+|+.++...
T Consensus 140 ea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~ 219 (450)
T TIGR02618 140 EAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAY 219 (450)
T ss_pred cccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChh
Confidence 245889999999999863 4578888888865 77754 789999999999999999999885321
Q ss_pred c-----------cCC----C--CcccEEEecccc-ccCCCCceEEEEec-CCCccccccccC-CccccccccCCCChhHH
Q 040741 242 V-----------DVE----K--WNVSLMSLSGHK-IYGPKGVGALYMRR-RPRIRVEPLING-GGQERGIRSGTLPTPLI 301 (457)
Q Consensus 242 ~-----------~~~----~--~~~Di~~~s~~K-~~g~~G~G~l~~~~-~~~~~~~~~~~~-~~~~~~~~~~t~~~~~~ 301 (457)
+ .+. + ..+|.+.+|++| .++|.| |+++.++ ++.++++....- ++. ..+|..+...+
T Consensus 220 ~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~G-G~l~~~d~~l~~k~r~~~~~~eG~---~tyGgla~r~~ 295 (450)
T TIGR02618 220 FIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIG-GFLCMNDDEMFQSAKELVVVFEGM---PSYGGLAGRDM 295 (450)
T ss_pred hhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCc-eEEEeCCHHHHHHHHHHhhhcCCc---cccCchhhhhH
Confidence 1 110 0 147999999999 666776 8888555 344554444211 111 12334444455
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEE----cccc-----chHHHhcc--
Q 040741 302 VGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSF----AYVE-----GESLLMGL-- 370 (457)
Q Consensus 302 ~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----~~~~~~~l-- 370 (457)
.++..+++...+ +...++.....++|.+.|.+ . |+.+..+.. .+.+.+.. +.+. ++.+...|
T Consensus 296 ~ala~gL~e~~~--~~y~~~r~~~a~~La~~L~~-~-Gvpv~~p~g---gh~V~vda~~~lph~~~~~~p~~al~~~ly~ 368 (450)
T TIGR02618 296 EAMAIGIREAVD--YEYIEHRVKQVRYLGDKLKA-A-GVPIVEPVG---GHAVFLDARRFLPHIPQDQFPAQSLAASIYV 368 (450)
T ss_pred HHHHHHHHHhhh--HHHHHHHHHHHHHHHHHHHH-C-CCcccCCCC---cceEEEEhHHhCCCCChhhChHHHHHHHHHH
Confidence 555556655443 23444455578889999988 4 887754322 34444433 2222 34454444
Q ss_pred -cCeEe-cccCccCCCCCChhHHHHHcCCCcc------CCCCeEEEecCCC-CCHHHHHHHHHHHHHHHHHHHhcC
Q 040741 371 -KEVAV-SSGSACTSASLEPSYVLRALGVDED------MAHTSIRFGIGRF-TTEAEVDRAIELTVKQVEKLREMS 437 (457)
Q Consensus 371 -~~i~~-~~g~~~~~~~~~~~~~l~~~g~~~~------~~~~~iRi~~~~~-~t~edid~~~~~l~~~~~~~~~~~ 437 (457)
.||-- .-|+.. +|.+++ ..-..+|+.+.+- -|.+++|++++++.+..++-....
T Consensus 369 ~~gir~~e~g~~~-------------~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~~~~ 431 (450)
T TIGR02618 369 ETGVRSMERGIVS-------------AGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHRDDIR 431 (450)
T ss_pred HhCccEEeeccee-------------cccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhhHhhcC
Confidence 23322 222221 121111 1136899998874 478999999999999987655443
No 290
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.84 E-value=5.8e-18 Score=169.07 Aligned_cols=329 Identities=16% Similarity=0.127 Sum_probs=206.5
Q ss_pred ccCCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCC
Q 040741 53 RIAGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSG 126 (457)
Q Consensus 53 ~~~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g 126 (457)
....+.-|||+.+. +..+|++.+++.+.+....-. + . +...+...++.++|++++....+.++|++|
T Consensus 70 ~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~--~-~----~~~~~~~~~lAe~L~~~~p~~~~~v~f~~S 142 (442)
T TIGR03372 70 IDTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLH--S-Q----ELLDPLRALLAKTLAALTPGKLKYSFFCNS 142 (442)
T ss_pred EECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCc--c-c----ccCCHHHHHHHHHHHHhCCCCcCEEEEeCC
Confidence 33455678886554 367899999999998764211 1 1 111256677888888887654456999999
Q ss_pred hHHHHHHHHHHhhhhhcC-CCCEEEEcCC-CCcchHHHHHHHHhc----Cc-----EEEEEeCCCCCCCCHHHHHHhcC-
Q 040741 127 ATESNNVSIKGVMHFYKD-KKRHVITTQT-EHKCVLDSCRHLQQE----GF-----EITYLPVGADGIVNLDELRAAIR- 194 (457)
Q Consensus 127 ~T~a~~~al~~~~~~~~~-~g~~vi~~~~-~h~~~~~~~~~~~~~----G~-----~v~~v~~~~~~~~d~~~le~~i~- 194 (457)
||+|++.|++....+... .+.+||+... .|.....+....... ++ .+..+|.+ |.+++++.++
T Consensus 143 GsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~-----d~~~~~~~l~~ 217 (442)
T TIGR03372 143 GTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFG-----DIEAMLKALNE 217 (442)
T ss_pred chHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCC-----CHHHHHHHHHH
Confidence 999999999977654322 2456666554 565555544332110 10 12233322 6777777663
Q ss_pred -----CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc--ccC--CCCcccEEEecccccc
Q 040741 195 -----PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP--VDV--EKWNVSLMSLSGHKIY 260 (457)
Q Consensus 195 -----~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~--~~~--~~~~~Di~~~s~~K~~ 260 (457)
.+...|+++.+....|.+.| ++++.++|++||+++|+|+++. +|... +.. ....+|+++++ |.+
T Consensus 218 ~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~g--K~l 295 (442)
T TIGR03372 218 CKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILCLA--KAL 295 (442)
T ss_pred HhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCeeeeh--hhh
Confidence 35789999999998999888 9999999999999999999995 43221 111 12247988755 944
Q ss_pred C-C-CCceEEEEecCCCccccccccCCccccccccCC--CChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhc
Q 040741 261 G-P-KGVGALYMRRRPRIRVEPLINGGGQERGIRSGT--LPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEK 336 (457)
Q Consensus 261 g-~-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t--~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 336 (457)
| . ..+|+++++++..+.+.... ....+| .++..+++..++++.+++ +...++.+++.+++++.|++.
T Consensus 296 g~G~~Pigavv~~~~i~~~~~~~~-------~~~~~T~~gnp~~~Aaa~a~L~~i~~--~~l~~~~~~~G~~l~~~L~~l 366 (442)
T TIGR03372 296 GGGVMPIGATIATEAVFSVLFDNP-------FLHTTTFGGNPLACAAALATINELLE--KNLPAQAAIKGDFLLDGFQQL 366 (442)
T ss_pred cCCcccceEEEecHHHHHhhhccC-------ccccCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHH
Confidence 3 2 24788888876555442110 011123 367777777788888876 345556666666666666541
Q ss_pred ---CCCe--EEeCCCCCcccceEEEEEccc-cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEE
Q 040741 337 ---LDGV--VVNGSMERRYIGNLNLSFAYV-EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRF 408 (457)
Q Consensus 337 ---~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi 408 (457)
+|.. .+.+ .+.++.+.+... ....+...+ +|+.+.... ...+.+||
T Consensus 367 ~~~~~~~i~~vRG-----~Gl~~giel~~~~~~~~i~~~l~~~Gvl~~~~~---------------------~~~~~lr~ 420 (442)
T TIGR03372 367 AAEYPDLIIEARG-----KGLLMAIEFRDNEIGYAFAKELFQQNILVAGTL---------------------NNAKSIRI 420 (442)
T ss_pred HHhCCCceEEEec-----ceEEEEEEeCChHHHHHHHHHHHHCCcEEeecC---------------------CCCCEEEE
Confidence 3321 1222 244444555321 123344444 577664210 01268999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHH
Q 040741 409 GIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 409 ~~~~~~t~edid~~~~~l~~~~ 430 (457)
.++..+|++|+|++++++++++
T Consensus 421 ~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 421 EPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred ECCcccCHHHHHHHHHHHHHhC
Confidence 9999999999999999998763
No 291
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.84 E-value=4.4e-18 Score=170.79 Aligned_cols=342 Identities=14% Similarity=0.138 Sum_probs=207.6
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChH
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGAT 128 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T 128 (457)
..+.-|||+.+. +...|++.+++.+.+....-.+. ++.. .+...++.++|++++....+.+.|+++||
T Consensus 43 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~-----~~~~-~~~~~~la~~l~~~~p~~~~~v~f~~sGs 116 (442)
T PRK13360 43 HDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPA-----FQMG-HPKAFELANRIAEIAPGGLNHVFFTNSGS 116 (442)
T ss_pred CCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCccc-----CCcC-CHHHHHHHHHHHHhCCCCCCEEEEeCCcH
Confidence 345568887544 46789999999999875321110 1111 24556788888888753335699999999
Q ss_pred HHHHHHHHHhhhhhcC----CCCEEEEcCC-CCcchHHHHHHHH----hcC-----cEEEEEeCCCC-C--CC-------
Q 040741 129 ESNNVSIKGVMHFYKD----KKRHVITTQT-EHKCVLDSCRHLQ----QEG-----FEITYLPVGAD-G--IV------- 184 (457)
Q Consensus 129 ~a~~~al~~~~~~~~~----~g~~vi~~~~-~h~~~~~~~~~~~----~~G-----~~v~~v~~~~~-~--~~------- 184 (457)
+|++.|++....+... .+.+||.... .|.....+..... ..+ ..+..+|...+ . .+
T Consensus 117 eA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 196 (442)
T PRK13360 117 ESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEH 196 (442)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHH
Confidence 9999999987765321 2356766555 4554444332210 001 11233332211 0 00
Q ss_pred ---CHHHHHHhcC----CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhh-hcCCC--cc--cCCCCc
Q 040741 185 ---NLDELRAAIR----PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQ-ALGKI--PV--DVEKWN 248 (457)
Q Consensus 185 ---d~~~le~~i~----~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~-~~g~~--~~--~~~~~~ 248 (457)
+++++++++. ++...|+++.+....|.+.| +++|.++|++||+++|+|+++ ++|.. .+ ......
T Consensus 197 ~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~ 276 (442)
T PRK13360 197 GAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVT 276 (442)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCC
Confidence 2457777774 45789999999999999988 999999999999999999999 55532 11 112234
Q ss_pred ccEEEeccccccCC--CCceEEEEecCCCcccccccc-CCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 040741 249 VSLMSLSGHKIYGP--KGVGALYMRRRPRIRVEPLIN-GGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITAL 325 (457)
Q Consensus 249 ~Di~~~s~~K~~g~--~G~G~l~~~~~~~~~~~~~~~-~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~ 325 (457)
+|+++++ |.+|. ..+|+++++++..+.+..... +......... +.++..+++..++++.+++ +...++.+++
T Consensus 277 PDivt~g--K~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~-~g~pl~~aaa~a~L~~l~~--~~l~~~~~~~ 351 (442)
T PRK13360 277 PDLLTCA--KGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTY-SGHPLACAAALATLDLYER--EGLLTRAARL 351 (442)
T ss_pred Cceeeee--eccccCccceEEEEEcHHHHHHhhcCCccccccccCCCC-CCCHHHHHHHHHHHHHHHh--CCHHHHHHHH
Confidence 7887665 95432 237888888765443321100 0000011112 3466777888888888876 3566778888
Q ss_pred HHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccc--c----chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCC
Q 040741 326 HDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYV--E----GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGV 397 (457)
Q Consensus 326 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~ 397 (457)
.+++++.|++ +.....+++. ...+.+..+.+... . ...+...+ +||.+...
T Consensus 352 g~~l~~~l~~-l~~~~~v~~v-rG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~------------------- 410 (442)
T PRK13360 352 APYWEDALHS-LRDAPHVIDI-RNLGLVGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYT------------------- 410 (442)
T ss_pred HHHHHHHHHH-hhcCCCeeee-eccceEEEEEEecCCCCcchhHHHHHHHHHHCCcEEEec-------------------
Confidence 8888888876 3222111111 11122223333211 1 12333333 56665421
Q ss_pred CccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 398 DEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 398 ~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
++.+||+++..+|++|||+++++|+++++++
T Consensus 411 -----~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 411 -----GDILALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred -----CCEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 1679999999999999999999999999754
No 292
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.84 E-value=1.5e-18 Score=161.18 Aligned_cols=333 Identities=18% Similarity=0.161 Sum_probs=235.4
Q ss_pred CCCCCCCCHHHHHHHHHHHhhccCCCCC---CccchhhhHHHHHHHHHHHHHHHhCCCCC-cEEEeCC-hHHHHHHHHHH
Q 040741 63 MQATTPVDPRVLDAMLPFYLSRYGNPHS---RTHLFGWESEVAVETARSQIADLIGASPK-EIIFTSG-ATESNNVSIKG 137 (457)
Q Consensus 63 ~~~~~~~~~~v~~a~~~~~~~~~~~p~~---~~~~~~~~~~~~~~~~~~~la~~~g~~~~-~i~~t~g-~T~a~~~al~~ 137 (457)
.+|+..+|++|++...+-+....|...+ .+|+ +......+.++++.++++++++++ +|+|..| +|..+.++..+
T Consensus 10 saGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHR-sk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~n 88 (365)
T COG1932 10 SAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHR-SKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMN 88 (365)
T ss_pred CCCcccCCHHHHHHHHHHHhhhccCCcceeeeccc-cHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHh
Confidence 3456678999999999888776651111 2232 456678999999999999999766 4666655 78889999999
Q ss_pred hhhhhcCCCC--EEEEcCCCCcchHHHHHHHHhcCcEEEEE---eCCCCCCCCHHHHHHhcCCCceEEEEeccccccccc
Q 040741 138 VMHFYKDKKR--HVITTQTEHKCVLDSCRHLQQEGFEITYL---PVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVI 212 (457)
Q Consensus 138 ~~~~~~~~g~--~vi~~~~~h~~~~~~~~~~~~~G~~v~~v---~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~ 212 (457)
+. .++. .|.+..++..+.-++-++..+ ..+... .-+.+..+|++... +.++...|.+++..+.+|+.
T Consensus 89 Ll----~~~~~~yv~~g~Ws~~a~~eA~~~~~~--~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeTi~Gv~ 160 (365)
T COG1932 89 LL----GKRGTDYVDTGAWSEFAIKEAKKVGKQ--PKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNETISGVE 160 (365)
T ss_pred hh----cccCceeEeeeehhHhHHHHHHHhccc--ccccccceeccCccCCCChhhcc--cCCCccEEEEecCCcccceE
Confidence 88 4443 477777777666666444321 122111 11233345555543 44556678898888889988
Q ss_pred cC-hHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCCceEEEEecCCCcccccc----ccCC--
Q 040741 213 QP-MEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPL----INGG-- 285 (457)
Q Consensus 213 ~~-l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~----~~~~-- 285 (457)
.| .+.+. . +.++++|.+..+.+.++|+.+ .|++.++.+|.+||.|+++++++++++++++.. +..+
T Consensus 161 v~~~p~~~---~--~~~~v~D~SS~ilsr~iDvsk--~dviyagaQKnlGpaGltvvIvr~~~l~r~~~~~~P~if~y~~ 233 (365)
T COG1932 161 VPELPDIG---S--DGLLVADASSAILSRPIDVSK--YDVIYAGAQKNLGPAGLTVVIVRPDLLERAESYTLPSIFDYLT 233 (365)
T ss_pred ccCCCCCC---C--CceEEEecccHHhcCCCChhH--cceEEEehhhccCccceEEEEEcHHHHhcccccCCchHhhchh
Confidence 77 23332 1 289999999999999999986 789999999999999999999999998888654 1111
Q ss_pred ccccccccCCCChhHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccc
Q 040741 286 GQERGIRSGTLPTPLIVGFGSACEIAKK--EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEG 363 (457)
Q Consensus 286 ~~~~~~~~~t~~~~~~~al~~al~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (457)
...++..+.||++..++.+...++++.. +++.+.++.++.++.|.+.+.+ .+...-...++.+...++.|.+...+-
T Consensus 234 ~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~-s~fy~~~v~~~~RS~mnV~f~~~~~~l 312 (365)
T COG1932 234 HADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDK-SDFYRNLVAKANRSRMNVTFTLVDAEL 312 (365)
T ss_pred hhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh-CCccccccchhhccceeEEEEcCcHHH
Confidence 2234556779999999999999999886 5999999999999999999999 555444444455555555666553222
Q ss_pred -hHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 364 -ESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 364 -~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
..++..+ +|+...-|. ...+.+|+++...++.|+++.+++.|+++.++.
T Consensus 313 d~~fv~eae~~gl~~lkGh---------------------r~vgGmRasiynA~~~e~veaL~~fm~~f~~~~ 364 (365)
T COG1932 313 DKGFVAEAEAAGLIYLKGH---------------------RSVGGLRASIYNAVPLEDVEALTDFMDWFEETY 364 (365)
T ss_pred HHHHHHHHHHcCCceeccc---------------------cCCCceeeeeecCCCHHHHHHHHHHHHHHHHhh
Confidence 1223332 455444331 112569999999999999999999999998764
No 293
>PLN02397 aspartate transaminase
Probab=99.83 E-value=1.2e-18 Score=174.71 Aligned_cols=284 Identities=14% Similarity=0.049 Sum_probs=179.1
Q ss_pred HHHHHHHHHHHHHhC-CC-----CCcEE--EeCChHHH--HHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcC
Q 040741 101 VAVETARSQIADLIG-AS-----PKEII--FTSGATES--NNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEG 170 (457)
Q Consensus 101 ~~~~~~~~~la~~~g-~~-----~~~i~--~t~g~T~a--~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G 170 (457)
....++|+.+++++. .. ++++. -+.+|+.+ +..++..+. .+||+|+++++.|+.+...++.. |
T Consensus 91 ~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~----~pGd~Vlv~~P~y~~y~~~~~~~---g 163 (423)
T PLN02397 91 EGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARF----YPGSTIYIPNPTWGNHHNIFRDA---G 163 (423)
T ss_pred CCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHh----CCCCEEEEeCCCchhHHHHHHHc---C
Confidence 467778888888763 21 12331 13344434 444444444 69999999999999999888777 9
Q ss_pred cEEEEEeC-C-CCCCCCHHHHHHhcC---CCceEEEEeccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCCC--
Q 040741 171 FEITYLPV-G-ADGIVNLDELRAAIR---PDTGLISVMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKI-- 240 (457)
Q Consensus 171 ~~v~~v~~-~-~~~~~d~~~le~~i~---~~t~li~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~-- 240 (457)
.+++.++. + .+..+|++.+++.+. +++++++++.+|||||.+.+ +++|+++|++||+++++|++|.--..
T Consensus 164 ~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~ 243 (423)
T PLN02397 164 VPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGD 243 (423)
T ss_pred CeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCc
Confidence 99999987 3 346789998887774 56789999999999999988 66788899999999999999863211
Q ss_pred ------cc-cCCCC-cccEEEeccccccCCCC--ceEEE--Ee-cCCCccccccccCCccccccccCCCChhHHHHHHHH
Q 040741 241 ------PV-DVEKW-NVSLMSLSGHKIYGPKG--VGALY--MR-RRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSA 307 (457)
Q Consensus 241 ------~~-~~~~~-~~Di~~~s~~K~~g~~G--~G~l~--~~-~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~a 307 (457)
++ ..... ..-+++.|++|.|+++| +||++ .. ++.+.++...+... .......++.....++..+
T Consensus 244 ~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~q~~~~~~ 320 (423)
T PLN02397 244 LDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLI---ARPMYSNPPIHGASIVATI 320 (423)
T ss_pred hhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHH---HhcccCCCcHHHHHHHHHH
Confidence 10 11111 12377889999888665 89985 32 22222221111000 0000112333333333333
Q ss_pred HHHH------HHhhHHHHHHHHHHHHHHHHHHhhcCCC----eEEeCCCCCcccceEEEEEccccchHHHhcc---cCeE
Q 040741 308 CEIA------KKEMDYDHKRITALHDRLLNGIKEKLDG----VVVNGSMERRYIGNLNLSFAYVEGESLLMGL---KEVA 374 (457)
Q Consensus 308 l~~~------~~~~~~~~~~~~~~~~~l~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~i~ 374 (457)
++.- .+.++...++++++++.+.+.|++ + + +.+..+ .+.+.+++. .+ .++...| .+|+
T Consensus 321 L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~-~-~~~~~~~~~~p-----~gg~fl~~~-l~-~~~~~~Ll~~~~V~ 391 (423)
T PLN02397 321 LGDPELFSEWTKELKGMADRIISMRQKLYDALEA-R-GSPGDWSHITK-----QIGMFSFTG-LN-KEQVDRMTKEYHIY 391 (423)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c-CCCCCCCcccC-----CceEEEecC-CC-HHHHHHHHHhCCEE
Confidence 4321 122567788999999999999998 5 3 333222 122223332 33 3455555 4777
Q ss_pred ecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 375 VSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 375 ~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
+..+ + ||++.. .+.+++++++++|+++++
T Consensus 392 v~~~-------------------------~--Ri~~~~-~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 392 MTRD-------------------------G--RISMAG-LSSKNVPYLADAIHAVVT 420 (423)
T ss_pred ECCC-------------------------C--eEEEee-CCHHHHHHHHHHHHHHHh
Confidence 6421 3 888864 468999999999999975
No 294
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.83 E-value=4.7e-18 Score=159.93 Aligned_cols=311 Identities=13% Similarity=0.151 Sum_probs=218.5
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCcEEEeCC-hHHHHHHHHHHhhhhhcCC----CCEEEEcCCCCcchHHHHHHHHhcCcE
Q 040741 98 ESEVAVETARSQIADLIGASPKEIIFTSG-ATESNNVSIKGVMHFYKDK----KRHVITTQTEHKCVLDSCRHLQQEGFE 172 (457)
Q Consensus 98 ~~~~~~~~~~~~la~~~g~~~~~i~~t~g-~T~a~~~al~~~~~~~~~~----g~~vi~~~~~h~~~~~~~~~~~~~G~~ 172 (457)
+..+.+.+++++|.++.|.+. +.+.+. |+.+-...+..+..++..+ ++.+|+++..|..+.-++..+ |++
T Consensus 106 G~l~li~~Lq~~L~~ITG~Da--vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~---G~~ 180 (496)
T COG1003 106 GYLELIYELQEWLKEITGMDA--VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMA---GFK 180 (496)
T ss_pred HHHHHHHHHHHHHHHhcCCce--eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhc---Cce
Confidence 444788999999999999976 777765 5666666666666665444 468999999999999888777 999
Q ss_pred EEEEeCCCCCCCCHHHHHHhcCCCceEEEEecccccccccc-ChHHHHHHHHhcCCcEEEehhhhcCCCcc-cCCCCccc
Q 040741 173 ITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQ-PMEEIGQICKEFKIPFHTDAAQALGKIPV-DVEKWNVS 250 (457)
Q Consensus 173 v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~-~l~~i~~l~~~~~v~li~D~a~~~g~~~~-~~~~~~~D 250 (457)
|+.|+++++|.+|+++|++++.+++..++++.+++ .|... ++.+|+++.+++|..++.|+|..-+.+.+ ...++|.|
T Consensus 181 VV~V~~~~~G~VDlddLk~k~~~~~AalMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~G~D 259 (496)
T COG1003 181 VVVVKCDENGNVDLDDLRAKAEDNLAALMITNPST-LGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDMGFD 259 (496)
T ss_pred EEEEecCCCCCccHHHHHHHhccceeEEEeccCcc-cccchhhHHHHHHHHHHcCCEEEecCcchhhhhccccccccccc
Confidence 99999999999999999999999999999999965 78885 59999999999999999999986433322 34567899
Q ss_pred EEEecccccc------CCCCceEEEEecCCCcccccc---ccCCc------cc-----cccccCCCChhHHHHHHHHHHH
Q 040741 251 LMSLSGHKIY------GPKGVGALYMRRRPRIRVEPL---INGGG------QE-----RGIRSGTLPTPLIVGFGSACEI 310 (457)
Q Consensus 251 i~~~s~~K~~------g~~G~G~l~~~~~~~~~~~~~---~~~~~------~~-----~~~~~~t~~~~~~~al~~al~~ 310 (457)
++-+.+||-| |.+|.|-+.++..+...+... ..++. .. ....+|+.+. ...++......
T Consensus 260 V~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~i-l~~a~~YI~~m 338 (496)
T COG1003 260 VVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASI-LPIAWAYIRMM 338 (496)
T ss_pred eEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcchH-HHHHHHHHHHH
Confidence 9999999943 456799999987655544321 01111 00 0001122221 12222222233
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEc------cccchHHHhcc--cCeEecccCccC
Q 040741 311 AKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFA------YVEGESLLMGL--KEVAVSSGSACT 382 (457)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l--~~i~~~~g~~~~ 382 (457)
..+++....+...-+++|+.+.|+. .+.+.-.+..+...-+.++.. +++..++..+| .|+..-.-++.
T Consensus 339 G~~GL~~ase~AvLNANYia~rL~~---~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfHaPT~~FP- 414 (496)
T COG1003 339 GADGLKQASEVAVLNANYIARRLKG---YYPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLLDYGFHAPTMYFP- 414 (496)
T ss_pred hHHHHHHHHHHHHHhHHHHHHHhhh---cCccccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHHhcCCCCCcccCc-
Confidence 3457888888899999999999987 333321122233444445544 56677888877 34433222211
Q ss_pred CCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 040741 383 SASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLREM 436 (457)
Q Consensus 383 ~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~~ 436 (457)
..-.+.+-|-+....+++++|+++++|.++.++.++-
T Consensus 415 -----------------liV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~~ 451 (496)
T COG1003 415 -----------------LIVAGTLMIEPTESESKEELDRFIDAMIAIREEADAV 451 (496)
T ss_pred -----------------cccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 1123677788888889999999999999999887654
No 295
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.83 E-value=9.2e-18 Score=168.59 Aligned_cols=342 Identities=15% Similarity=0.144 Sum_probs=207.4
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChH
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGAT 128 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T 128 (457)
..+.-|+|+.+. +...|++.+++.+.+....-.+. .+. ..+...++.++|++++....+.+.|++||+
T Consensus 46 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~-----~~~-~~~~~~~la~~L~~~~p~~~~~v~f~~sGs 119 (445)
T PRK09221 46 ADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPA-----FQM-GHPLAFELAERLAELAPGGLDHVFFTNSGS 119 (445)
T ss_pred CCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccc-----ccc-CCHHHHHHHHHHHHhCCCCCCEEEEeCCcH
Confidence 345568887543 36789999999999875321111 011 124566788888888754345799999999
Q ss_pred HHHHHHHHHhhhhhcC----CCCEEEEcCC-CCcchHHHHHHHH----hcCc-----EEEEEeCCC-C-----CC-----
Q 040741 129 ESNNVSIKGVMHFYKD----KKRHVITTQT-EHKCVLDSCRHLQ----QEGF-----EITYLPVGA-D-----GI----- 183 (457)
Q Consensus 129 ~a~~~al~~~~~~~~~----~g~~vi~~~~-~h~~~~~~~~~~~----~~G~-----~v~~v~~~~-~-----~~----- 183 (457)
+|++.|++....+... .+.+||.... .|.....+..... ..++ .+..++... . +.
T Consensus 120 eAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (445)
T PRK09221 120 ESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEH 199 (445)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHH
Confidence 9999999987765421 2346665554 4544443332110 0011 122333221 0 00
Q ss_pred --CCHHHHHHhcC----CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCC--cccCC--CCc
Q 040741 184 --VNLDELRAAIR----PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKI--PVDVE--KWN 248 (457)
Q Consensus 184 --~d~~~le~~i~----~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~--~~~~~--~~~ 248 (457)
-+++++++.++ ++...|+++.+....|.+.| +++|.++|++||+++|+|++++ +|.. .+... ...
T Consensus 200 ~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~ 279 (445)
T PRK09221 200 GAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVT 279 (445)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCC
Confidence 01356777664 45789999999999999988 9999999999999999999984 5422 11122 224
Q ss_pred ccEEEecccccc--CCCCceEEEEecCCCccccccccC-CccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 040741 249 VSLMSLSGHKIY--GPKGVGALYMRRRPRIRVEPLING-GGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITAL 325 (457)
Q Consensus 249 ~Di~~~s~~K~~--g~~G~G~l~~~~~~~~~~~~~~~~-~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~ 325 (457)
+|+++++ |.+ |...+|+++++++..+.+...... .....+... +.++..+++..++++.+++ +...++.+++
T Consensus 280 PDi~~~g--K~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~-~~~pl~~aaa~a~L~~i~~--~~l~~~~~~~ 354 (445)
T PRK09221 280 PDIITFA--KGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTY-SAHPVACAAGLATLDIYRE--EDLFERAAEL 354 (445)
T ss_pred CCEEEec--cccccCcccceeeEEcHHHHHhhccCcccccccccccCC-CcCHHHHHHHHHHHHHHHh--ccHHHHHHHH
Confidence 6887666 943 312378888887654443221000 000011222 3455566666678888766 3567888899
Q ss_pred HHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcccc------chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCC
Q 040741 326 HDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVE------GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGV 397 (457)
Q Consensus 326 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~ 397 (457)
.+++++.|++ +.....+.+ ....+.+..+.+.... ...+...+ +|+.+..+
T Consensus 355 g~~l~~~l~~-l~~~~~v~~-vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~------------------- 413 (445)
T PRK09221 355 APYFEDAVHS-LKGLPHVID-IRNIGLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRYT------------------- 413 (445)
T ss_pred HHHHHHHHHh-hccCCCEEE-EecCceEEEEEEecccccccchHHHHHHHHHHCCeEEeec-------------------
Confidence 9999998877 422211111 1112333344443211 12333333 56665422
Q ss_pred CccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 398 DEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 398 ~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
.+.|||+++..+|++|||+++++|+++++++
T Consensus 414 -----~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 414 -----GDTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred -----CCEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 1689999999999999999999999999764
No 296
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.83 E-value=1e-18 Score=162.91 Aligned_cols=294 Identities=17% Similarity=0.214 Sum_probs=206.2
Q ss_pred HHHHHHHHHHHHHhC--------CCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcE
Q 040741 101 VAVETARSQIADLIG--------ASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFE 172 (457)
Q Consensus 101 ~~~~~~~~~la~~~g--------~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~ 172 (457)
.....+++.+|+++. .+|+++++++|+|.|++.+...++ +||+..+++.|.|++...-.+. +.|++
T Consensus 121 ~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLa----dpgdafLvPtPyY~gfdrdl~~--rTgve 194 (471)
T KOG0256|consen 121 HGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLA----DPGDAFLVPTPYYPGFDRDLRW--RTGVE 194 (471)
T ss_pred cCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhc----CCCceeeecCCCCCccccccee--ccCce
Confidence 467778888888873 478899999999999999999988 8999999999999999765543 45999
Q ss_pred EEEEeCC--CCCCCCHHHHHHhcC------CCceEEEEeccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCCCc
Q 040741 173 ITYLPVG--ADGIVNLDELRAAIR------PDTGLISVMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKIP 241 (457)
Q Consensus 173 v~~v~~~--~~~~~d~~~le~~i~------~~t~li~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~~ 241 (457)
++.+.+. .+..++.+++|+++. .+.+.+++++|+||.|...+ +..+..++.++++.+|+|+.++.....
T Consensus 195 ivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~ 274 (471)
T KOG0256|consen 195 IVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFD 274 (471)
T ss_pred EEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccC
Confidence 9998886 345789999998875 24689999999999999988 667778899999999999999743211
Q ss_pred ---c--------cCC-CCcccEEEeccccccCCCC--ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHH
Q 040741 242 ---V--------DVE-KWNVSLMSLSGHKIYGPKG--VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSA 307 (457)
Q Consensus 242 ---~--------~~~-~~~~Di~~~s~~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~a 307 (457)
+ +.. ..+.--++.|.+|=+|.+| .|+++..++........+.. .+..+.....-+..-
T Consensus 275 ~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmss--------f~~vSs~tQ~~la~L 346 (471)
T KOG0256|consen 275 KSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSS--------FGLVSSQTQYLLASL 346 (471)
T ss_pred ccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhh--------ccCCcHHHHHHHHHH
Confidence 0 110 1112235778889888666 99999887644433333321 123333322222222
Q ss_pred H---HHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcc-c-----c-chHHHhcc--c-CeE
Q 040741 308 C---EIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAY-V-----E-GESLLMGL--K-EVA 374 (457)
Q Consensus 308 l---~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~-~~~~~~~l--~-~i~ 374 (457)
+ ++.+..+++..+|++...+++-+.|++ .|+....... +-++.+.+.. . + ...+...+ + ++.
T Consensus 347 LSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~--lgI~cl~s~A---GlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vkln 421 (471)
T KOG0256|consen 347 LSDEEFTREYLRENNKRLRIRHRYIVEGLKA--LGIPCLKSNA---GLFCWVDLRKLLTSLTFEGELELWERILDNVKLN 421 (471)
T ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHhhHHh--cCCceeecCC---eeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccc
Confidence 2 223335888889999999999999999 5776654321 2223333321 1 1 12344444 3 889
Q ss_pred ecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 375 VSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 375 ~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
+++|+.|... || +|+|+++.. +.++.++.++++++.+++
T Consensus 422 lSpG~s~~C~--Ep---------------GWFRvcFAn-~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 422 LSPGSSCHCH--EP---------------GWFRVCFAN-MSEETLEVAMRRLKQFLD 460 (471)
T ss_pred cCCCCcceec--CC---------------CeEEEEecc-CCHHHHHHHHHHHHHHHH
Confidence 9999987542 11 999999986 346667779999999887
No 297
>PRK06541 hypothetical protein; Provisional
Probab=99.83 E-value=1.3e-17 Score=168.02 Aligned_cols=345 Identities=13% Similarity=0.068 Sum_probs=210.4
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChH
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGAT 128 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T 128 (457)
..+.-|+|+.+. +..+|++.+++.+.+.... ... . .++. .+...++.++|.++++.+.+.++|+++|+
T Consensus 49 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~-~~~--~--~~~~-~~~~~~la~~l~~~~p~~~~~v~f~~sGs 122 (460)
T PRK06541 49 DRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLA-FFP--L--WSYA-HPPAIELAERLAALAPGDLNRVFFTTGGS 122 (460)
T ss_pred CCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCc-Ccc--c--cccC-CHHHHHHHHHHHHhCCCCcCEEEEcCCcH
Confidence 455568887543 3578999999999987531 000 0 0111 24566777888888764445799999999
Q ss_pred HHHHHHHHHhhhhhc---C-CCCEEEEcC-CCCcchHHHHHHHHh----cC-----cEEEEEeCCCCC-----CCC----
Q 040741 129 ESNNVSIKGVMHFYK---D-KKRHVITTQ-TEHKCVLDSCRHLQQ----EG-----FEITYLPVGADG-----IVN---- 185 (457)
Q Consensus 129 ~a~~~al~~~~~~~~---~-~g~~vi~~~-~~h~~~~~~~~~~~~----~G-----~~v~~v~~~~~~-----~~d---- 185 (457)
+|++.|++....+.. . .+.+|+... ..|.....+...... .+ ..+..++.+... .-|
T Consensus 123 eAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 202 (460)
T PRK06541 123 EAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAF 202 (460)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHH
Confidence 999999998776532 1 245666544 455555544432110 01 112233322110 012
Q ss_pred ----HHHHHHhcC----CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhh-hcCCCcc--cC--CCCc
Q 040741 186 ----LDELRAAIR----PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQ-ALGKIPV--DV--EKWN 248 (457)
Q Consensus 186 ----~~~le~~i~----~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~-~~g~~~~--~~--~~~~ 248 (457)
++.+++.++ .+..+|+++.++++.|.+.| +++|.++|++||+++|+|+++ ++|.... .. ....
T Consensus 203 ~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~ 282 (460)
T PRK06541 203 GRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYV 282 (460)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCC
Confidence 366777774 35678889999999999988 999999999999999999999 5653221 11 1224
Q ss_pred ccEEEeccccccCC-C-CceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 040741 249 VSLMSLSGHKIYGP-K-GVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALH 326 (457)
Q Consensus 249 ~Di~~~s~~K~~g~-~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~ 326 (457)
+|++++ +|.+|. . .+|+++++++..+.+.+.. . ...... ....++..+++..+.++.+.+ +...++.+++.
T Consensus 283 PDivt~--gK~l~~G~~pigav~~~~~i~~~~~~~~-~-~~~~~~-T~~gnp~~~aaala~l~~l~~--~~~~~~~~~~g 355 (460)
T PRK06541 283 PDIITC--AKGITSGYSPLGAMIASDRLFEPFLDGP-T-MFLHGY-TFGGHPVSAAVALANLDIFER--EGLLDHVRDNE 355 (460)
T ss_pred CCEEEe--cccccCCccceeEEEEcHHHHHHhhcCC-C-ccccCC-CCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHH
Confidence 788865 595542 1 3899999887655443211 0 000001 123455666666677777655 35668888888
Q ss_pred HHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcccc-------c--------hHHHhcc--cCeEecccCccCCCCCChh
Q 040741 327 DRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVE-------G--------ESLLMGL--KEVAVSSGSACTSASLEPS 389 (457)
Q Consensus 327 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~--------~~~~~~l--~~i~~~~g~~~~~~~~~~~ 389 (457)
+++.+.|++ +....++++ ....+.++.+.|.... . ..+...+ +|+.+.+..
T Consensus 356 ~~l~~~L~~-l~~~~~v~~-vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---------- 423 (460)
T PRK06541 356 PAFRATLEK-LLDLPIVGD-VRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADD---------- 423 (460)
T ss_pred HHHHHHHHH-hhcCCCeEE-EEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecC----------
Confidence 999888877 422111111 1112444445542110 0 0122222 566664310
Q ss_pred HHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHh
Q 040741 390 YVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLRE 435 (457)
Q Consensus 390 ~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~ 435 (457)
.+...|||++...+|++|||+++++++++++++..
T Consensus 424 -----------~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~~ 458 (460)
T PRK06541 424 -----------RGDPVVQLAPPLISGQEEFDEIEQILRSVLTEAWA 458 (460)
T ss_pred -----------CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 11268999999999999999999999999987653
No 298
>PRK06105 aminotransferase; Provisional
Probab=99.83 E-value=5.6e-18 Score=170.87 Aligned_cols=344 Identities=15% Similarity=0.108 Sum_probs=210.0
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhcc-CCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCh
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRY-GNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGA 127 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~ 127 (457)
..+.-|+|+.+. +..+|++.+|+.+.+.... ....+ ....+...++.++|+++++.+.+.++|+++|
T Consensus 45 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~------~~~~~~~~~lae~L~~~~p~~~~~v~f~~SG 118 (460)
T PRK06105 45 DAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFS------HKSHGPVIDLAEKLVAMAPVPMSKVFFTNSG 118 (460)
T ss_pred CCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeeccc------ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCc
Confidence 445568887543 2578999999999987531 01110 0112566778888888886544579999999
Q ss_pred HHHHHHHHHHhhhhhc---C-CCCEEEE-cCCCCcchHHHHHHHHhc------C---cEEEEEeCCCCCC----------
Q 040741 128 TESNNVSIKGVMHFYK---D-KKRHVIT-TQTEHKCVLDSCRHLQQE------G---FEITYLPVGADGI---------- 183 (457)
Q Consensus 128 T~a~~~al~~~~~~~~---~-~g~~vi~-~~~~h~~~~~~~~~~~~~------G---~~v~~v~~~~~~~---------- 183 (457)
++|++.|++....+.. . .+.+||. ....|.....+....... | ..+..++.+....
T Consensus 119 seAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 198 (460)
T PRK06105 119 SEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEA 198 (460)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHH
Confidence 9999999998654321 1 2345555 455676665543322100 1 0122222221000
Q ss_pred ---CCHHHHHHhcC----CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhh-hcCCCc----ccCCCC
Q 040741 184 ---VNLDELRAAIR----PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQ-ALGKIP----VDVEKW 247 (457)
Q Consensus 184 ---~d~~~le~~i~----~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~-~~g~~~----~~~~~~ 247 (457)
.+++++++++. .+...|+++.+....|.+.| ++++.++|++||+++|+|+++ ++|... ......
T Consensus 199 ~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v 278 (460)
T PRK06105 199 FATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGI 278 (460)
T ss_pred HHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCC
Confidence 12466777773 35689999999988898877 999999999999999999998 455321 112223
Q ss_pred cccEEEecccccc-CC-CCceEEEEecCCCccccccccC-CccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHH
Q 040741 248 NVSLMSLSGHKIY-GP-KGVGALYMRRRPRIRVEPLING-GGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITA 324 (457)
Q Consensus 248 ~~Di~~~s~~K~~-g~-~G~G~l~~~~~~~~~~~~~~~~-~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~ 324 (457)
.+|+++++ |.+ |. ..+|+++++++..+.+.+.... +...... ....++..+++..++++.+++ +...++.++
T Consensus 279 ~PDi~~~g--K~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~-T~~gnpl~~aaa~a~L~~i~~--~~l~~~v~~ 353 (460)
T PRK06105 279 KPDILVMS--KQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHGF-TASGHPVAAAVALENLAIIEE--RDLVGNAAE 353 (460)
T ss_pred CCCeeeee--cccccCcccceEEEEcHHHHHHHhcccccCcccccCC-CCCCCHHHHHHHHHHHHHHHh--ccHHHHHHH
Confidence 57988776 944 32 2479999987655444321100 0000001 124566667777778888876 466777888
Q ss_pred HHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcccc------------chHHHhcc--cCeEecccCccCCCCCChhH
Q 040741 325 LHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVE------------GESLLMGL--KEVAVSSGSACTSASLEPSY 390 (457)
Q Consensus 325 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l--~~i~~~~g~~~~~~~~~~~~ 390 (457)
+.+++++.|.+ +....++++ ....+.++.+.+.... ...+...+ +|+.+.+.
T Consensus 354 ~g~~l~~~L~~-l~~~~~v~~-vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~------------ 419 (460)
T PRK06105 354 RGARLQARLRA-LADHPLVGE-VRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAM------------ 419 (460)
T ss_pred HHHHHHHHHHH-hhcCCCeEE-EEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEec------------
Confidence 88888887766 322221211 1122444445442110 01222222 46555321
Q ss_pred HHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHh
Q 040741 391 VLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLRE 435 (457)
Q Consensus 391 ~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~ 435 (457)
.+.+||+++..+|++|||++++++.++++++..
T Consensus 420 ------------g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 452 (460)
T PRK06105 420 ------------GDTLAFCPPLIITAAQVDEMVDRFGRALDDVAA 452 (460)
T ss_pred ------------CCEEEEECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 168999999999999999999999999988654
No 299
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.82 E-value=3.2e-17 Score=164.58 Aligned_cols=338 Identities=13% Similarity=0.112 Sum_probs=208.4
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChH
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGAT 128 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T 128 (457)
..+.-|||+.+. +..+|++.+++.+.+....-... .+...+...++.+.|.+.++...+.++|+++||
T Consensus 38 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~------~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGs 111 (443)
T PRK08360 38 IEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTP------IYGFPVEPLLLAEKLIEIAPGDNPKVSFGLSGS 111 (443)
T ss_pred CCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCccc------cccCcHHHHHHHHHHHHhCCCCCCEEEEcCCHH
Confidence 345568887544 25789999999999876321110 011124566777888888765445699999999
Q ss_pred HHHHHHHHHhhhhhcCCCCEEEEcC-CCCcchHHHHHHHHh-----cC----cEEEEEeCCCCCC------------CCH
Q 040741 129 ESNNVSIKGVMHFYKDKKRHVITTQ-TEHKCVLDSCRHLQQ-----EG----FEITYLPVGADGI------------VNL 186 (457)
Q Consensus 129 ~a~~~al~~~~~~~~~~g~~vi~~~-~~h~~~~~~~~~~~~-----~G----~~v~~v~~~~~~~------------~d~ 186 (457)
+|++.|++....+ ..+.+|+... ..|.....+...... .+ ..+.+++.+.... .++
T Consensus 112 EAve~AlklAr~~--tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (443)
T PRK08360 112 DANDGAIKFARAY--TKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECV 189 (443)
T ss_pred HHHHHHHHHHHHh--cCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHH
Confidence 9999999977654 2344555544 566666555432210 01 1233443321100 134
Q ss_pred HHHHHhcC-----CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc--cc--CCCCcccEE
Q 040741 187 DELRAAIR-----PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP--VD--VEKWNVSLM 252 (457)
Q Consensus 187 ~~le~~i~-----~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~--~~--~~~~~~Di~ 252 (457)
+.++++++ ++++.|+++.+++++|.+.| +++|.++|++||+++|+|++++ +|... +. .....+|++
T Consensus 190 ~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDii 269 (443)
T PRK08360 190 EYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDII 269 (443)
T ss_pred HHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEE
Confidence 55666663 56889999999999998876 8899999999999999999986 33211 11 112346877
Q ss_pred EeccccccCC-CCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 040741 253 SLSGHKIYGP-KGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLN 331 (457)
Q Consensus 253 ~~s~~K~~g~-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~ 331 (457)
++ +|.+|+ -.+|+++++++..+.+.....+ .....++..+++..++++.+.+ +...++.+++.+++++
T Consensus 270 tl--sK~l~~G~pigav~~~~~i~~~~~~~~~~-------~T~~~~p~~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~~ 338 (443)
T PRK08360 270 TL--GKPLGGGLPISATIGRAEIMDSLPPLAHA-------FTLSGNPVASAAALAVIEEIEE--KNLLKRAEKLGNYTKK 338 (443)
T ss_pred Ee--cccccCCceeEEEEEcHHHHhhhcCCCCC-------CCCCcCHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHH
Confidence 55 696653 2389999987665555422111 1123455557777778887765 3466777777777777
Q ss_pred HHhhcCCCeEEeCCCCCcccceEEEEEcccc---------chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCcc
Q 040741 332 GIKEKLDGVVVNGSMERRYIGNLNLSFAYVE---------GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDED 400 (457)
Q Consensus 332 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~ 400 (457)
.|++......++++ ....+.++.+.|.... ...+...+ +|+.+...
T Consensus 339 ~L~~l~~~~~~v~~-vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---------------------- 395 (443)
T PRK08360 339 RLEEMKKKHELIGD-VRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFF---------------------- 395 (443)
T ss_pred HHHHHHHhCCCeee-eeccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeec----------------------
Confidence 77651011111221 1122444444442110 11233333 56655321
Q ss_pred CCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHh
Q 040741 401 MAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLRE 435 (457)
Q Consensus 401 ~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~ 435 (457)
..+.+||.++..+|++|||+++++++++++++..
T Consensus 396 -~~~~lr~~P~l~~t~~~id~~~~~l~~~l~~~~~ 429 (443)
T PRK08360 396 -SGNVLRIQPPLTIEKEVLDEGLDILEEAIEDVEE 429 (443)
T ss_pred -CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1278999999999999999999999999988743
No 300
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.82 E-value=3.7e-17 Score=163.39 Aligned_cols=336 Identities=15% Similarity=0.134 Sum_probs=204.5
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCCh
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGAS-PKEIIFTSGA 127 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~i~~t~g~ 127 (457)
..+.-|+|+.+. +..+|++.+++.+.+.+..-. .. .....+...++.++|.++++-. .+.++|++||
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~-~~-----~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SG 110 (425)
T PRK07495 37 KEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHT-CH-----QVVPYENYVRLAERLNALVPGDFAKKTIFVTTG 110 (425)
T ss_pred CCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCc-cc-----CccCCHHHHHHHHHHHHhCCCCCCCEEEECCch
Confidence 445568886543 467899999999998763211 10 0111245666778888887643 2469999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCEEEE-cCCCCcchHHHHHHHH-----hcCc-----EEEEEeCCCC--CC---CCHHHHHH
Q 040741 128 TESNNVSIKGVMHFYKDKKRHVIT-TQTEHKCVLDSCRHLQ-----QEGF-----EITYLPVGAD--GI---VNLDELRA 191 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~~g~~vi~-~~~~h~~~~~~~~~~~-----~~G~-----~v~~v~~~~~--~~---~d~~~le~ 191 (457)
|+|++.|++....+ ..+.+|+. ....|.....+..... ..++ .+..++.+.+ +. -+++++++
T Consensus 111 seA~e~AlklAr~~--tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~ 188 (425)
T PRK07495 111 AEAVENAVKIARAA--TGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDK 188 (425)
T ss_pred HHHHHHHHHHHHHh--hCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHH
Confidence 99999999987654 23445655 4455665544432211 1111 2344544321 11 12455677
Q ss_pred hcC-----CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCC--cccCCC--CcccEEEeccc
Q 040741 192 AIR-----PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKI--PVDVEK--WNVSLMSLSGH 257 (457)
Q Consensus 192 ~i~-----~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~--~~~~~~--~~~Di~~~s~~ 257 (457)
.+. ++.+.|+++.+....|.+.+ +++|.++|++||+++|+|+++. +|.. .+.... ..+|++++ +
T Consensus 189 ~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv~pDi~tl--s 266 (425)
T PRK07495 189 LFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEVAADLTTM--A 266 (425)
T ss_pred HHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecccCCCCCEEee--h
Confidence 653 35788899988888786543 8899999999999999999986 3221 111222 24676655 4
Q ss_pred cccC-CCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhc
Q 040741 258 KIYG-PKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEK 336 (457)
Q Consensus 258 K~~g-~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 336 (457)
|.+| ...+|+++++++..+.+.+...+ . ....++..+++..++++.+++ ....++.+++.+++++.|++.
T Consensus 267 K~l~~G~pigav~~~~~i~~~~~~~~~~------~-T~~~~pl~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~~~L~~l 337 (425)
T PRK07495 267 KGLAGGFPLAAVTGRAEIMDAPGPGGLG------G-TYGGNPLGIAAAHAVLDVIEE--EDLCERANQLGNRLKQRLASL 337 (425)
T ss_pred hhhcCCccceEEEEcHHHHhccCCCCcC------C-CCCCCHHHHHHHHHHHHHHHh--chHHHHHHHHHHHHHHHHHHH
Confidence 9443 33489999988766655432211 1 124556667767778888765 345556666666666665541
Q ss_pred ---CCCe-EEeCCCCCcccceEEEEEcccc--------chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCC
Q 040741 337 ---LDGV-VVNGSMERRYIGNLNLSFAYVE--------GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMA 402 (457)
Q Consensus 337 ---~~~~-~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~ 402 (457)
+|.+ .+.+ .+.++.+.+...+ ...+...+ +|+.+.... ..
T Consensus 338 ~~~~~~i~~vrG-----~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g---------------------~~ 391 (425)
T PRK07495 338 RETVPEIADIRG-----PGFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTCG---------------------VH 391 (425)
T ss_pred HhhCCCeeeeec-----CceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeecC---------------------CC
Confidence 3322 1222 1444445553211 01222222 566653210 01
Q ss_pred CCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHh
Q 040741 403 HTSIRFGIGRFTTEAEVDRAIELTVKQVEKLRE 435 (457)
Q Consensus 403 ~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~ 435 (457)
.+.|||.++..+|++|+|+++++|++++++++.
T Consensus 392 ~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~~~ 424 (425)
T PRK07495 392 GNVIRFLAPITIQDDVFAEALDILEASILEASA 424 (425)
T ss_pred CCEEEEeCCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 278999999999999999999999999987753
No 301
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.82 E-value=7.9e-18 Score=164.69 Aligned_cols=303 Identities=16% Similarity=0.102 Sum_probs=192.1
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHH-HHHHHhcCcEEEEEe--
Q 040741 101 VAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDS-CRHLQQEGFEITYLP-- 177 (457)
Q Consensus 101 ~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~-~~~~~~~G~~v~~v~-- 177 (457)
+.+.++++.+++++|.+. ++++++||.|++++....+ ++|+.| +..+|.....+ +.. .|+...-+.
T Consensus 78 ~s~~~LE~~vAe~lG~e~--aV~v~sGTaAl~ll~~l~v----~pGd~V--p~n~~f~Tt~ahI~~---~Ga~fvDi~~d 146 (460)
T PRK13237 78 RNFYHLEETVQEYYGFKH--VVPTHQGRGAENLLSRIAI----KPGQYV--PGNMYFTTTRYHQEL---NGGIFVDIIID 146 (460)
T ss_pred CcHHHHHHHHHHHHCCCe--EEEeCCHHHHHHHHHHhCC----CCcCEE--CCccchHhhHHHHHh---CCcEEEeeecc
Confidence 567899999999999876 9999999999998755444 789965 55556666554 433 376433221
Q ss_pred --------CCCCCCCCHHHHHHhcCCC----ceEEEEecccccc-cccc---ChHHHHHHHHhcCCcEEEehhhhcCCCc
Q 040741 178 --------VGADGIVNLDELRAAIRPD----TGLISVMAVNNEI-GVIQ---PMEEIGQICKEFKIPFHTDAAQALGKIP 241 (457)
Q Consensus 178 --------~~~~~~~d~~~le~~i~~~----t~li~i~~~~~~~-G~~~---~l~~i~~l~~~~~v~li~D~a~~~g~~~ 241 (457)
.+.+|.+|+++|+++|+++ +.+++++.++|.. |... ++++|.++|++||+.||.|+|+.++...
T Consensus 147 ~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~ 226 (460)
T PRK13237 147 EAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAY 226 (460)
T ss_pred cccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChh
Confidence 1246889999999999854 3467777777777 5665 5799999999999999999999987331
Q ss_pred -----------ccCC------CCcccEEEecccc-ccCCCCceEEEEecC-CCccccccccCCccccccccCCCChhHHH
Q 040741 242 -----------VDVE------KWNVSLMSLSGHK-IYGPKGVGALYMRRR-PRIRVEPLINGGGQERGIRSGTLPTPLIV 302 (457)
Q Consensus 242 -----------~~~~------~~~~Di~~~s~~K-~~g~~G~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~ 302 (457)
..+. -...|.+++|++| ..++.| |+++.+++ +.++++....-+ +....+|..+...+.
T Consensus 227 fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~G-G~i~t~D~eL~~~~r~~~~~~--eG~~tygg~~grd~~ 303 (460)
T PRK13237 227 FIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIG-GFLAMNDEELFDEAKELVVVY--EGMPSYGGMAGRDME 303 (460)
T ss_pred hhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCc-eEEEECCHHHHHHHHHhcccc--CCCcCCCChhhhHHH
Confidence 1110 0136999999999 556666 88888775 333443332111 000123344444555
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEE----ccc-----cchHHHhcc---
Q 040741 303 GFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSF----AYV-----EGESLLMGL--- 370 (457)
Q Consensus 303 al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-----~~~~~~~~l--- 370 (457)
++..++....+ ....++.-...++|.+.|.+ .|+.++.+.. . ..+.+.. +.+ .+..+...|
T Consensus 304 alAvgl~E~~~--~~y~~~ri~~~~~l~~~L~~--~Gvpv~~p~g-g--H~v~vda~~~lph~~~~~~p~~al~~~ly~~ 376 (460)
T PRK13237 304 AMAIGIEESVQ--YEYIEHRVGQVRYLGEKLLA--AGVPIVEPVG-G--HAVFLDARRFLPHLPQDQFPAQALAAELYIE 376 (460)
T ss_pred HHHhHHHhhch--HHHHHHHHHHHHHHHHHHHH--CCCceecCCC-c--eEEEEEhHHhCCCCCcccChHHHHHHHHHHH
Confidence 55555554443 24455555677888888888 5887776432 2 2222221 222 234555444
Q ss_pred cCeEe-cccCccCCCCCChhHHHHHcCCCccC------CCCeEEEecCCC-CCHHHHHHHHHHHHHHHHHHHhcC
Q 040741 371 KEVAV-SSGSACTSASLEPSYVLRALGVDEDM------AHTSIRFGIGRF-TTEAEVDRAIELTVKQVEKLREMS 437 (457)
Q Consensus 371 ~~i~~-~~g~~~~~~~~~~~~~l~~~g~~~~~------~~~~iRi~~~~~-~t~edid~~~~~l~~~~~~~~~~~ 437 (457)
.||-- .-|+.. +|.+++. .-..+|+.+.+- -|.+++|++++++.+..++-....
T Consensus 377 ~GiR~~e~g~~~-------------~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~~~~ 438 (460)
T PRK13237 377 SGVRSMERGIVS-------------AGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKHREDIR 438 (460)
T ss_pred hCcCeEeeccee-------------cccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHhHhhcC
Confidence 23321 112211 1222211 126899998874 478999999999999987655443
No 302
>PRK06062 hypothetical protein; Provisional
Probab=99.82 E-value=1.5e-17 Score=167.40 Aligned_cols=335 Identities=13% Similarity=0.096 Sum_probs=205.5
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChH
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGAT 128 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T 128 (457)
..+.-|+|+.+. +...|++.+++.+.+....-. .. .+ ..+...++.++|.+++....+.+.|++||+
T Consensus 50 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~-~~-----~~-~~~~~~~lae~L~~~~p~~~~~v~f~~SGs 122 (451)
T PRK06062 50 YEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTV-AP-----AH-ANDARSEAARLIAERAPGDLSKVFFTNGGA 122 (451)
T ss_pred CCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCc-CC-----cc-CCHHHHHHHHHHHHhCCCCCCEEEEcCChH
Confidence 455568887553 367899999999998753211 00 11 125567788888888764445799999999
Q ss_pred HHHHHHHHHhhhhhcCCCCEEEEcC-CCCcchHHHHHHHHhc---C-----cEEEEEeCCCCCC------CC-------H
Q 040741 129 ESNNVSIKGVMHFYKDKKRHVITTQ-TEHKCVLDSCRHLQQE---G-----FEITYLPVGADGI------VN-------L 186 (457)
Q Consensus 129 ~a~~~al~~~~~~~~~~g~~vi~~~-~~h~~~~~~~~~~~~~---G-----~~v~~v~~~~~~~------~d-------~ 186 (457)
+|++.|++....+ ..+.+||... ..|.....+....... . ..+..++.+.... -| +
T Consensus 123 EAve~AlklAr~~--tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 200 (451)
T PRK06062 123 DANEHAVRMARLH--TGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERAL 200 (451)
T ss_pred HHHHHHHHHHHHh--hCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHH
Confidence 9999999987754 2345565544 4565555554332100 0 0112222221110 12 6
Q ss_pred HHHHHhcC----CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc----ccCCCCcccEEE
Q 040741 187 DELRAAIR----PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP----VDVEKWNVSLMS 253 (457)
Q Consensus 187 ~~le~~i~----~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~----~~~~~~~~Di~~ 253 (457)
++++++++ ++...|+++.+....|.+.| +++|.++|++||+++|+|++++ +|... .......+|+++
T Consensus 201 ~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t 280 (451)
T PRK06062 201 AHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLIT 280 (451)
T ss_pred HHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCCeee
Confidence 77888774 35689999999988999988 9999999999999999999987 33221 111123578887
Q ss_pred eccccccC-C-CCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHH-HHHH
Q 040741 254 LSGHKIYG-P-KGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALH-DRLL 330 (457)
Q Consensus 254 ~s~~K~~g-~-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~-~~l~ 330 (457)
++ |.+| . ..+|+++++++..+.+.... ...+..+ +.++..+++..++++.++++ ...++.+++. ++++
T Consensus 281 ~g--K~lggG~~Pigav~~~~~i~~~~~~~~----~~~~~T~-~gnpl~~Aaa~a~L~~l~~~--~l~~~~~~~G~~~l~ 351 (451)
T PRK06062 281 FA--KGVNSGYVPLGGVAISEAIAATFADRP----YPGGLTY-SGHPLACAAAVATINAMEEE--GIVENAARIGAEVLG 351 (451)
T ss_pred ec--hhhhcCCcCcEEEEEcHHHHHHhccCC----CCCCCCC-CCCHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHH
Confidence 65 9443 2 24899999876555443211 0011112 34566777777888887663 3555566665 4555
Q ss_pred HHHhhc---CCCe-EEeCCCCCcccceEEEEEcccc---------------chHHHhcc--cCeEecccCccCCCCCChh
Q 040741 331 NGIKEK---LDGV-VVNGSMERRYIGNLNLSFAYVE---------------GESLLMGL--KEVAVSSGSACTSASLEPS 389 (457)
Q Consensus 331 ~~l~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~l--~~i~~~~g~~~~~~~~~~~ 389 (457)
+.|++. .+.+ .+.+ .+.++.+.+.... ...+...+ +|+.+..
T Consensus 352 ~~L~~l~~~~~~v~~vrG-----~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~------------ 414 (451)
T PRK06062 352 PGLRELAERHPSVGEVRG-----LGVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFV------------ 414 (451)
T ss_pred HHHHHHHhcCCcEEeEec-----cccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEee------------
Confidence 555441 3321 1222 2444444442110 01222222 3554321
Q ss_pred HHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 040741 390 YVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLREM 436 (457)
Q Consensus 390 ~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~~ 436 (457)
..+.+||+++..+|++|||+++++++++++++.+.
T Consensus 415 ------------~~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~~~ 449 (451)
T PRK06062 415 ------------NGNRIHVVPPCTVTEDEVREGLAILDAALAVADAA 449 (451)
T ss_pred ------------cCCEEEEECCccCCHHHHHHHHHHHHHHHHHhhhc
Confidence 12689999999999999999999999999887653
No 303
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.82 E-value=3.8e-17 Score=164.55 Aligned_cols=339 Identities=14% Similarity=0.097 Sum_probs=206.6
Q ss_pred ccCCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeC
Q 040741 53 RIAGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGAS-PKEIIFTS 125 (457)
Q Consensus 53 ~~~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~i~~t~ 125 (457)
....+.-|||+.+. +...|++.+++.+.+.+.. .... .....+...++.++|++.++.. .+.++|++
T Consensus 51 ~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~-~~~~-----~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~ 124 (443)
T PRK06058 51 EDVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFT-HTCF-----MVTPYEGYVAVAEQLNRLTPGDHEKRSALFN 124 (443)
T ss_pred EeCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhcc-Cccc-----cccCCHHHHHHHHHHHHhCCCCCCCEEEEeC
Confidence 33455568887553 2678999999999987531 1111 0011256667888888887633 24699999
Q ss_pred ChHHHHHHHHHHhhhhhcCCCCEEEEcCC-CCcchHHHHHHHH-----hcCc-----EEEEEeCCCCCC------C----
Q 040741 126 GATESNNVSIKGVMHFYKDKKRHVITTQT-EHKCVLDSCRHLQ-----QEGF-----EITYLPVGADGI------V---- 184 (457)
Q Consensus 126 g~T~a~~~al~~~~~~~~~~g~~vi~~~~-~h~~~~~~~~~~~-----~~G~-----~v~~v~~~~~~~------~---- 184 (457)
+|++|++.|++....+. + +++||.... .|.....+..... ..++ .+..++...... .
T Consensus 125 sGseA~e~AlklAr~~t-g-r~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (443)
T PRK06058 125 SGAEAVENAVKIARSYT-G-RQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEE 202 (443)
T ss_pred CcHHHHHHHHHHHHHhh-C-CCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHH
Confidence 99999999999766542 3 456666555 4555444433221 1111 122222211000 0
Q ss_pred ----CHHHHHHhcC-CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc--c--cCCCCccc
Q 040741 185 ----NLDELRAAIR-PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP--V--DVEKWNVS 250 (457)
Q Consensus 185 ----d~~~le~~i~-~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~--~--~~~~~~~D 250 (457)
.++.+++.+. ++.+.|+++.++...|.+.| +++|.++|++||+++|.|+++. +|... + ......+|
T Consensus 203 ~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PD 282 (443)
T PRK06058 203 AAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPD 282 (443)
T ss_pred HHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCC
Confidence 1334455553 56788889988877787765 9999999999999999999986 33221 1 11123479
Q ss_pred EEEeccccccC-CCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 040741 251 LMSLSGHKIYG-PKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRL 329 (457)
Q Consensus 251 i~~~s~~K~~g-~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l 329 (457)
+++++ |.+| .-.+|+++++++..+.+.+...+. ....++..+++..++++.+.+ +...++.+++.+++
T Consensus 283 iv~~g--K~l~~G~Pi~av~~~~~i~~~~~~~~~~~-------T~~gnpl~~aaa~a~L~~~~~--~~l~~~~~~~g~~l 351 (443)
T PRK06058 283 LITTA--KGIAGGLPLSAVTGRAEIMDAPHPGGLGG-------TYGGNPVACAAALAAIETIEE--DDLVARARQIEALM 351 (443)
T ss_pred EEEEc--ccccCCCccEEEEEcHHHHhhccCCCCCC-------CCCCCHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHH
Confidence 98876 9443 234899999887665554332211 124566677777788887765 35667777777777
Q ss_pred HHHHhhcCC-CeEEeCCCCCcccceEEEEEccc----cc----hHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCC
Q 040741 330 LNGIKEKLD-GVVVNGSMERRYIGNLNLSFAYV----EG----ESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVD 398 (457)
Q Consensus 330 ~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~----~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~ 398 (457)
.+.|++ +. ...++++ ....+.++.+.+... .. ..+...+ +|+.+.++...
T Consensus 352 ~~~L~~-l~~~~~~i~~-vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~~----------------- 412 (443)
T PRK06058 352 TDRLRA-LAAEDDRIGD-VRGRGAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCGTY----------------- 412 (443)
T ss_pred HHHHHH-HHhhCCcEEe-eeccceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccCCC-----------------
Confidence 777765 21 1112111 112244444555211 11 1233322 57776543110
Q ss_pred ccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 399 EDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 399 ~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
.+.|||.++..+|++|||+++++++++++++
T Consensus 413 ----~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 413 ----GNVIRLLPPLVIGDELLREGLDVLEAALADL 443 (443)
T ss_pred ----CCEEEEECCCccCHHHHHHHHHHHHHHHHhC
Confidence 1689999999999999999999999998753
No 304
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.82 E-value=3.2e-19 Score=173.48 Aligned_cols=230 Identities=20% Similarity=0.280 Sum_probs=169.8
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC
Q 040741 101 VAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA 180 (457)
Q Consensus 101 ~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~ 180 (457)
....++++..|+.+|++. ..++++|+|.+|.+++.+++ ++||.||+++..|.|+..++... |+.++|++...
T Consensus 66 G~I~eAe~~aA~~fGAd~-t~flvnGsT~g~~a~i~a~~----~~gd~VLv~RN~HkSv~~alil~---ga~Pvyi~p~~ 137 (417)
T PF01276_consen 66 GIIKEAEELAARAFGADK-TFFLVNGSTSGNQAMIMALC----RPGDKVLVDRNCHKSVYNALILS---GAIPVYIPPED 137 (417)
T ss_dssp THHHHHHHHHHHHHTESE-EEEESSHHHHHHHHHHHHHT----TTTCEEEEETT--HHHHHHHHHH---TEEEEEEEEEE
T ss_pred cHHHHHHHHHHHhcCCCe-EEEEecCchHHHHHHHHHhc----CCCCEEEEcCCcHHHHHHHHHHc---CCeEEEecCCc
Confidence 588999999999999864 37777888889999999999 89999999999999999998887 99999998752
Q ss_pred C-----CCCCH-----HHHHHhcCC--C---ceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhc----CCCc
Q 040741 181 D-----GIVNL-----DELRAAIRP--D---TGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQAL----GKIP 241 (457)
Q Consensus 181 ~-----~~~d~-----~~le~~i~~--~---t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~----g~~~ 241 (457)
+ +.+++ +.++++|+. . .++++++++++ .|.+.++++|+++|++++++|++|+||+. ...+
T Consensus 138 ~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp 216 (417)
T PF01276_consen 138 NEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLP 216 (417)
T ss_dssp -TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGG
T ss_pred cccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEECHHHHHHHhcccCCEEEEEccccccccCCCCc
Confidence 2 24566 889998863 2 24588888754 89999999999999999999999999973 2223
Q ss_pred ccCCCCccc-------EEEecccc-ccCCCCceEEEEecCC-C--ccccccccCCccccccccCCCChhHHHHHHHHHHH
Q 040741 242 VDVEKWNVS-------LMSLSGHK-IYGPKGVGALYMRRRP-R--IRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEI 310 (457)
Q Consensus 242 ~~~~~~~~D-------i~~~s~~K-~~g~~G~G~l~~~~~~-~--~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~ 310 (457)
.+....++| +++-|.|| +.+....+++.++... + +++...+. -+.+.+|+.+.++++..|...
T Consensus 217 ~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~------~~~TTSPSY~lmASlD~a~~~ 290 (417)
T PF01276_consen 217 RSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALS------MHQTTSPSYPLMASLDVARAQ 290 (417)
T ss_dssp TTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHH------HHS-SS--HHHHHHHHHHHHH
T ss_pred cchhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHH------HHcCCChHHHHHHHHHHHHHH
Confidence 333345788 99999999 5666667888888864 2 22322221 134568889999999998888
Q ss_pred H-HHhhHHHHHHHHHHHHHHHHHH---hhcCCCeEEeCCC
Q 040741 311 A-KKEMDYDHKRITALHDRLLNGI---KEKLDGVVVNGSM 346 (457)
Q Consensus 311 ~-~~~~~~~~~~~~~~~~~l~~~l---~~~~~~~~~~~~~ 346 (457)
+ ..+-+++.++..++++.+++.| .+ .+++.+.+++
T Consensus 291 m~~~~G~~l~~~~i~~a~~~R~~i~~~~~-~~~~~~~~~~ 329 (417)
T PF01276_consen 291 MEEEEGRELLEEAIELAEEFRKKINRLND-IWGFKVLGPE 329 (417)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHHHHHHCC-T-SSEESS-S
T ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHhcCC-CceEecCCcc
Confidence 8 4556788888888888888888 45 7888887764
No 305
>PRK07678 aminotransferase; Validated
Probab=99.82 E-value=1.9e-17 Score=166.75 Aligned_cols=350 Identities=12% Similarity=0.081 Sum_probs=208.3
Q ss_pred cCCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCh
Q 040741 54 IAGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGA 127 (457)
Q Consensus 54 ~~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~ 127 (457)
...+.-|+|+.+. +...|++.+++.+.+....-.+. .+ ..+...++.+.|.++++.. +.++|++||
T Consensus 43 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~------~~-~~~~~~~lae~l~~~~~~~-~~v~f~~sG 114 (451)
T PRK07678 43 DIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPL------TQ-SHEPAIKLAEKLNEWLGGE-YVIFFSNSG 114 (451)
T ss_pred eCCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCcccc------cc-CCHHHHHHHHHHHHhCCCC-CEEEEeCCc
Confidence 3455568887543 36789999999999875421111 11 1245567888888888653 469999999
Q ss_pred HHHHHHHHHHhhhhhcC----CCCEEEEcCC-CCcchHHHHHHHHhc----C-----cEEEEEeCCCCCC---------C
Q 040741 128 TESNNVSIKGVMHFYKD----KKRHVITTQT-EHKCVLDSCRHLQQE----G-----FEITYLPVGADGI---------V 184 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~----~g~~vi~~~~-~h~~~~~~~~~~~~~----G-----~~v~~v~~~~~~~---------~ 184 (457)
|+|++.|++....+... .+.+||.... .|.....+....... + ..+..++.+.... .
T Consensus 115 seA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (451)
T PRK07678 115 SEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIY 194 (451)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHH
Confidence 99999999988765421 2356665554 555554443322100 0 1122233221110 1
Q ss_pred C---HHHHHHhcC----CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc--ccCC--CCc
Q 040741 185 N---LDELRAAIR----PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP--VDVE--KWN 248 (457)
Q Consensus 185 d---~~~le~~i~----~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~--~~~~--~~~ 248 (457)
| ++.+++.+. ++...|+++.+....|.+.| ++++.++|++||+++|+|+++. +|... +... ...
T Consensus 195 ~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~ 274 (451)
T PRK07678 195 DLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVK 274 (451)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCC
Confidence 1 233566663 46789999999888888876 8999999999999999999984 54321 1122 224
Q ss_pred ccEEEeccccc-cCC-CCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 040741 249 VSLMSLSGHKI-YGP-KGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALH 326 (457)
Q Consensus 249 ~Di~~~s~~K~-~g~-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~ 326 (457)
+|+++++ |. .|. ..+|+++++++..+.+.+....+...... ....++..+++..++++.+++ +...++.+++.
T Consensus 275 PDivt~g--K~lggG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~-T~~gnp~~~aaa~a~l~~l~~--~~~~~~~~~~g 349 (451)
T PRK07678 275 PDIITMA--KGITSAYLPLSATAVKKEIYEAFKGKGEYEHFRHVN-TFGGNPAACALALKNLEIMEN--ENLIERSAQLG 349 (451)
T ss_pred CCEEEee--cccccCCcceeEEEEcHHHHHHHhccCcccccccCC-CCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHH
Confidence 8999776 94 333 24899999987655443211000000011 124566677777778888766 35566777777
Q ss_pred HHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccc-------c---chHHHhcc--cCeEecccCccCCCCCChhHHHHH
Q 040741 327 DRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYV-------E---GESLLMGL--KEVAVSSGSACTSASLEPSYVLRA 394 (457)
Q Consensus 327 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~---~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~ 394 (457)
+++++.|.+.+....++++ ....+.++.+.+... + ...+...+ +|+.+.......
T Consensus 350 ~~l~~~l~~~~~~~~~v~~-vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v------------ 416 (451)
T PRK07678 350 ELLLEQLKEELGEHPLVGD-IRGKGLLVGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKNGDTV------------ 416 (451)
T ss_pred HHHHHHHHHHHhcCCCEEE-EEeeceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeecCccc------------
Confidence 7777766541111111111 112244444555211 0 11233333 576664311000
Q ss_pred cCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 395 LGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 395 ~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
....+.|||+++..+|++|||++++++++++++++
T Consensus 417 -----~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (451)
T PRK07678 417 -----AGYNNVLTLSPPLVISSEEIAFIVGTLKTALERIK 451 (451)
T ss_pred -----cCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhcC
Confidence 01126899999999999999999999999998653
No 306
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.82 E-value=4.5e-17 Score=163.76 Aligned_cols=337 Identities=15% Similarity=0.157 Sum_probs=205.0
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCC-CcEEEeCCh
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASP-KEIIFTSGA 127 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~-~~i~~t~g~ 127 (457)
..+.-|||+.+. +..+|++.+++.+.+....-. .. .....+...++.+.|+++++... +.+.|+++|
T Consensus 39 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~-~~-----~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SG 112 (445)
T PRK08593 39 VDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHY-TP-----AYMYHEPLVRLAKKLCELAPGDFEKRVTFGLSG 112 (445)
T ss_pred CCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCc-cc-----cccCCHHHHHHHHHHHHhCCCCCCCEEEECCch
Confidence 344568887442 256899999999998753211 00 00112566778888988886432 469999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCEEEE-cCCCCcchHHHHHHHHh-----cC-----cEEEEEeCCCCC-----CCC------
Q 040741 128 TESNNVSIKGVMHFYKDKKRHVIT-TQTEHKCVLDSCRHLQQ-----EG-----FEITYLPVGADG-----IVN------ 185 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~~g~~vi~-~~~~h~~~~~~~~~~~~-----~G-----~~v~~v~~~~~~-----~~d------ 185 (457)
++|++.|++....+. + +.+|+. ....|.....+...... .+ ..+..++.+... ..+
T Consensus 113 seA~e~AiklAr~~t-g-r~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 190 (445)
T PRK08593 113 SDANDGIIKFARAYT-G-RPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEE 190 (445)
T ss_pred HHHHHHHHHHHHHhh-C-CCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHH
Confidence 999999999776542 3 344554 55567666555433210 00 123334432110 011
Q ss_pred -HHHHHHhcC-----CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc--c--cCCCCccc
Q 040741 186 -LDELRAAIR-----PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP--V--DVEKWNVS 250 (457)
Q Consensus 186 -~~~le~~i~-----~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~--~--~~~~~~~D 250 (457)
++++++.+. ++.+.|+++.+.+..|.+.| +++|.++|++||+++|+|+++. +|... + ......+|
T Consensus 191 ~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pD 270 (445)
T PRK08593 191 YLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPD 270 (445)
T ss_pred HHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCC
Confidence 244554442 56889999999998898877 9999999999999999999984 44221 1 11122478
Q ss_pred EEEeccccccC-CCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 040741 251 LMSLSGHKIYG-PKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRL 329 (457)
Q Consensus 251 i~~~s~~K~~g-~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l 329 (457)
+++++ |.+| .-.+|+++++++..+.+...... + ....++..+++..++++.+++ +...++.+++.+++
T Consensus 271 i~t~g--K~l~~G~p~gav~~~~~i~~~~~~~~~~------~-T~~~~pl~~aaa~a~l~~l~~--~~l~~~~~~~g~~l 339 (445)
T PRK08593 271 LMSFG--KSLAGGMPMSAIVGRKEIMESLEAPAHL------F-TTGANPVSCAAALATIDMIED--ESLLQRSAEKGEYA 339 (445)
T ss_pred Eeeec--ccccCCcccEEEEEcHHHHhhhccCCCC------C-CCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHH
Confidence 77655 9443 22379999987765554321111 1 224556667777778888776 35667777777777
Q ss_pred HHHHhhcCCCeEEeCCCCCcccceEEEEEccc------c---chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCC
Q 040741 330 LNGIKEKLDGVVVNGSMERRYIGNLNLSFAYV------E---GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVD 398 (457)
Q Consensus 330 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~ 398 (457)
++.|++......++++ ....+.++.+.+... + ...+...+ +||.+.+.
T Consensus 340 ~~~L~~l~~~~~~v~~-vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~-------------------- 398 (445)
T PRK08593 340 RKRFDQWVSKYNFVGD-VRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAV-------------------- 398 (445)
T ss_pred HHHHHHHHhcCCcEEE-EeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEecc--------------------
Confidence 7777651011111111 111233333444211 0 11233333 56655321
Q ss_pred ccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 399 EDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 399 ~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
..+.+||.++..+|++|||+++++++++++++.
T Consensus 399 ---~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 431 (445)
T PRK08593 399 ---AGNVLRFQPPLVITYEQLDTALNTIEQAFTALE 431 (445)
T ss_pred ---CCCEEEEECCCccCHHHHHHHHHHHHHHHHHHh
Confidence 126899999999999999999999999998763
No 307
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.82 E-value=1.3e-17 Score=167.80 Aligned_cols=323 Identities=16% Similarity=0.151 Sum_probs=199.5
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChH
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGAT 128 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T 128 (457)
..+.-|||+.+. +..+|++.+++.+.+.+... +.. ..+...++.++|+++++.. ++++|++||+
T Consensus 45 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~--------~~~-~~~~~~~lae~l~~~~~~~-~~v~~~~sGs 114 (423)
T TIGR00713 45 VDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTS--------YGA-PTEAEILLAKEIISRVPSV-EMVRFVNSGT 114 (423)
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCc--------CCC-CCHHHHHHHHHHHHhCCcc-cEEEEeCCHH
Confidence 445568886543 26789999999999875321 111 1246678999999988643 5799999999
Q ss_pred HHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCc-----------------EEEEEeCCCCCCCCHHHHHH
Q 040741 129 ESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGF-----------------EITYLPVGADGIVNLDELRA 191 (457)
Q Consensus 129 ~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~-----------------~v~~v~~~~~~~~d~~~le~ 191 (457)
+|+..+++....+ ..+++||+....|.+....+......|. .+..++. .|++++++
T Consensus 115 eA~e~Alk~ar~~--~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~ 187 (423)
T TIGR00713 115 EATMSAVRLARGY--TGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPY-----NDLEALEE 187 (423)
T ss_pred HHHHHHHHHHHHh--hCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCC-----CCHHHHHH
Confidence 9999999987654 3457888877766665443322100010 1111221 28999999
Q ss_pred hcC---CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhhcCCC--c--ccCCCCcccEEEecccccc
Q 040741 192 AIR---PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQALGKI--P--VDVEKWNVSLMSLSGHKIY 260 (457)
Q Consensus 192 ~i~---~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~~g~~--~--~~~~~~~~Di~~~s~~K~~ 260 (457)
+++ +++++|+++.+.+.+|.+.| +++|.++|++||+++|+|++|..... . .......+|++ +++|.+
T Consensus 188 ~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~~~~~~pDi~--t~sK~l 265 (423)
T TIGR00713 188 VFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQEYFGVEPDLT--TLGKII 265 (423)
T ss_pred HHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHHHhCCCcchh--hhhhhh
Confidence 886 56788888766666898877 78999999999999999999853211 1 11112246755 567966
Q ss_pred CC-CCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHhhcC
Q 040741 261 GP-KGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKE--MDYDHKRITALHDRLLNGIKEKL 337 (457)
Q Consensus 261 g~-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~ 337 (457)
|+ -.+|+++++++..+.+.+... ... ......++..+++..++++.++++ +++..+..+.+.+.+.+.+.+ +
T Consensus 266 ~~G~pig~v~~~~~i~~~~~~~~~---~~~-~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~ 340 (423)
T TIGR00713 266 GGGLPVGAFGGRREIMERLAPEGP---VYQ-AGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLED-T 340 (423)
T ss_pred cCCCceeeeeEHHHHHHhhCcCCC---eee-ccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHh-c
Confidence 52 238999998876665542100 000 011145666677777788877652 344444555555555555555 3
Q ss_pred CCeEE--eCCCCCcccceEEEEEccc-----------cch---HHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCc
Q 040741 338 DGVVV--NGSMERRYIGNLNLSFAYV-----------EGE---SLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDE 399 (457)
Q Consensus 338 ~~~~~--~~~~~~~~~~~~~~~~~~~-----------~~~---~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~ 399 (457)
++.. .+ .+.++.+.+... +.. .+...+ +||.+..+.
T Consensus 341 -~~~~~v~~-----~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-------------------- 394 (423)
T TIGR00713 341 -GIPHTVNR-----VGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPSQ-------------------- 394 (423)
T ss_pred -CCCeEEEe-----eccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecCC--------------------
Confidence 2222 22 134444444210 111 233333 576654321
Q ss_pred cCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 400 DMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 400 ~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
.+.+||++. ++++||++++++|++++++
T Consensus 395 ---~~~~~l~~~--~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 395 ---FEACFLSAA--HTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred ---ccceeeECC--CCHHHHHHHHHHHHHHHhh
Confidence 035788775 6899999999999998865
No 308
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.82 E-value=1.7e-17 Score=164.89 Aligned_cols=332 Identities=16% Similarity=0.140 Sum_probs=202.4
Q ss_pred cCCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCh
Q 040741 54 IAGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGA 127 (457)
Q Consensus 54 ~~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~ 127 (457)
...+.-|+|+.+. +..+|++.+++.+.+...... . .. ...+...++.++|.++.+. .+.++|++||
T Consensus 36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~-~--~~----~~~~~~~~la~~L~~~~~~-~~~v~f~~sG 107 (408)
T PRK04612 36 DDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHT-S--NV----FYSAPPLKLAEELVTASRF-AEKVFLCNSG 107 (408)
T ss_pred ECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcccc-c--cc----cCCHHHHHHHHHHHhhCCC-CCEEEEcCch
Confidence 3455568887543 357899999999998753211 1 00 1123455677777777643 2569999999
Q ss_pred HHHHHHHHHHhhhhhcCC-----CCEEEEcCC-CCcchHHHHHHHHh----cCcE-----EEEEeCCCCCCCCHHHHHHh
Q 040741 128 TESNNVSIKGVMHFYKDK-----KRHVITTQT-EHKCVLDSCRHLQQ----EGFE-----ITYLPVGADGIVNLDELRAA 192 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~~-----g~~vi~~~~-~h~~~~~~~~~~~~----~G~~-----v~~v~~~~~~~~d~~~le~~ 192 (457)
++|++.|++....+.... +.+|+.... .|.....+...... .++. +..++ ..|++.++++
T Consensus 108 seA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~ 182 (408)
T PRK04612 108 TEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVD-----FNDVEALEAA 182 (408)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcC-----CCCHHHHHHh
Confidence 999999999877654211 345666555 45555544332211 1111 11222 2278999998
Q ss_pred cCC-CceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc--ccCCCC--cccEEEeccccccCC
Q 040741 193 IRP-DTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP--VDVEKW--NVSLMSLSGHKIYGP 262 (457)
Q Consensus 193 i~~-~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~--~~~~~~--~~Di~~~s~~K~~g~ 262 (457)
+++ +..+|+++.++...|.+.+ +++|.++|++||+++|+|++++ +|... +..... .+|+++ ++|.+|+
T Consensus 183 ~~~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t--~~K~l~~ 260 (408)
T PRK04612 183 MAGGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVT--LAKALGG 260 (408)
T ss_pred hCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCCEEE--EcchhcC
Confidence 864 4566677766554455543 8899999999999999999986 32211 111112 345554 5595542
Q ss_pred -CCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeE
Q 040741 263 -KGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVV 341 (457)
Q Consensus 263 -~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 341 (457)
-.+|+++++++..+.+.....+ ... +.++..+++..++++.+++ +.+.++.+++.+++++.|++....+.
T Consensus 261 G~piga~~~~~~~~~~~~~~~~~------~t~-~~~p~~~aaa~a~L~~~~~--~~l~~~~~~~g~~l~~~l~~l~~~~~ 331 (408)
T PRK04612 261 GFPIGAMLAGPKVAETMQFGAHG------TTF-GGNPLAAAVARVALRKLAS--PQIAANVARQSAALRAGLEALNAEFG 331 (408)
T ss_pred CCceEEEEECHHHHhhhcCCCcC------CCC-CCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 2389998887654444332111 112 3566777777778887765 46677778888888777766111111
Q ss_pred EeCCCCCcccceEEEEEccc---cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCH
Q 040741 342 VNGSMERRYIGNLNLSFAYV---EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTE 416 (457)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~ 416 (457)
++++. ...+.++.+.+... ....+...+ +|+.+.+. +.+.|||.++..+++
T Consensus 332 ~i~~v-rg~Gl~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~~-----------------------g~~~lRl~Ppl~it~ 387 (408)
T PRK04612 332 VFAQV-RGRGLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQA-----------------------GPDVLRFVPALNLTD 387 (408)
T ss_pred Ceeee-eccceEEEEEecCchhhHHHHHHHHHHHCCeEEeeC-----------------------CCCEEEEcCCccCCH
Confidence 22211 12244444554311 123344444 56665321 127899999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 040741 417 AEVDRAIELTVKQVEKL 433 (457)
Q Consensus 417 edid~~~~~l~~~~~~~ 433 (457)
+|||+++++++++++++
T Consensus 388 eeid~~l~~l~~~l~~~ 404 (408)
T PRK04612 388 AELADGLARLRLALADY 404 (408)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999999765
No 309
>PRK15029 arginine decarboxylase; Provisional
Probab=99.81 E-value=5.6e-18 Score=176.27 Aligned_cols=223 Identities=14% Similarity=0.072 Sum_probs=169.3
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC
Q 040741 101 VAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA 180 (457)
Q Consensus 101 ~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~ 180 (457)
....++++..|+++|++. ..++++|+|.+|.+++.+++ ++|+.||+++.+|.|+..++... |+.+++++...
T Consensus 205 G~I~eAq~~aA~~fgA~~-t~FlvNGST~gn~a~i~a~~----~~gd~Vlv~RN~HKSv~~al~L~---ga~Pvyl~P~~ 276 (755)
T PRK15029 205 GAFGESEKYAARVFGADR-SWSVVVGTSGSNRTIMQACM----TDNDVVVVDRNCHKSIEQGLILT---GAKPVYMVPSR 276 (755)
T ss_pred cHHHHHHHHHHHHhCCCc-EEEEeCChhHHHHHHHHHhc----CCCCEEEeecccHHHHHHHHHHc---CCeEEEecccc
Confidence 477889999999999863 48888899999999999999 89999999999999999988777 99999997652
Q ss_pred --C---CCCC-----HHHHHHhcCCC--ce--------EEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcC--
Q 040741 181 --D---GIVN-----LDELRAAIRPD--TG--------LISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALG-- 238 (457)
Q Consensus 181 --~---~~~d-----~~~le~~i~~~--t~--------li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g-- 238 (457)
. +.++ ++.++++|... .+ ++++++++ ..|.+.++++|+++|++++++|++|+||+.-
T Consensus 277 ~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PT-Y~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~ 355 (755)
T PRK15029 277 NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCT-YDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYAR 355 (755)
T ss_pred cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCC-CcceeeCHHHHHHHHHhcCCeEEEECccccccc
Confidence 1 2344 88999988532 23 78888774 4899999999999999999999999999741
Q ss_pred ---CCc--ccC-----CCCccc-EEEecccc-ccCCCCceEEEEecC--CCc--cccccccCCccccccccCCCChhHHH
Q 040741 239 ---KIP--VDV-----EKWNVS-LMSLSGHK-IYGPKGVGALYMRRR--PRI--RVEPLINGGGQERGIRSGTLPTPLIV 302 (457)
Q Consensus 239 ---~~~--~~~-----~~~~~D-i~~~s~~K-~~g~~G~G~l~~~~~--~~~--~~~~~~~~~~~~~~~~~~t~~~~~~~ 302 (457)
..| ..+ ...++| +++-|.|| +.+....+++-++.. .++ ++...+.- +.+.+|+.+.++
T Consensus 356 F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~~~l~~------~qSTSPSY~LmA 429 (755)
T PRK15029 356 FNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMM------HATTSPLYAICA 429 (755)
T ss_pred cCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHHHHHHH------HcCCCcHHHHHH
Confidence 122 111 114788 88889999 455555677777554 122 22222211 235588889999
Q ss_pred HHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCCC
Q 040741 303 GFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLDG 339 (457)
Q Consensus 303 al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~ 339 (457)
++..|...+.. .-....++..+.+..+++.+.+ +++
T Consensus 430 SLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~-~~~ 466 (755)
T PRK15029 430 SNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMAR-LYK 466 (755)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHh-ccc
Confidence 99988887775 4577778888888888888876 543
No 310
>PRK05965 hypothetical protein; Provisional
Probab=99.81 E-value=2.2e-17 Score=166.52 Aligned_cols=346 Identities=15% Similarity=0.110 Sum_probs=211.3
Q ss_pred ccCCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCC
Q 040741 53 RIAGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSG 126 (457)
Q Consensus 53 ~~~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g 126 (457)
....+.-|||+.+. +...|++.+++.+.+.+..-... .++.. .+...++.++|.+.+..+.+.++|+++
T Consensus 41 ~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~----~~~~~-~~~~~~lae~L~~~~p~~~~~v~f~~s 115 (459)
T PRK05965 41 TDASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATG----YFHFG-SEPAIRLAAKLAERAPGSLNHVYFTLG 115 (459)
T ss_pred EECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCccc----ccccC-CHHHHHHHHHHHhhCCCCcCEEEEeCC
Confidence 33455578887653 35689999999999875321100 00111 245567888888887544457999999
Q ss_pred hHHHHHHHHHHhhhhhcC---C-CCEEEEcCC-CCcchHHHHHHHHh------cC---cEEEEEeCCCCC----CCC---
Q 040741 127 ATESNNVSIKGVMHFYKD---K-KRHVITTQT-EHKCVLDSCRHLQQ------EG---FEITYLPVGADG----IVN--- 185 (457)
Q Consensus 127 ~T~a~~~al~~~~~~~~~---~-g~~vi~~~~-~h~~~~~~~~~~~~------~G---~~v~~v~~~~~~----~~d--- 185 (457)
|++|++.|++....+... + +.+||.... +|.....+...... .| ..+..++.+... .-|
T Consensus 116 GSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (459)
T PRK05965 116 GSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQA 195 (459)
T ss_pred hhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHH
Confidence 999999999987765321 2 355665554 45554443332210 11 012233322100 012
Q ss_pred -----HHHHHHhcC----CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCC--cccCC--CC
Q 040741 186 -----LDELRAAIR----PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKI--PVDVE--KW 247 (457)
Q Consensus 186 -----~~~le~~i~----~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~--~~~~~--~~ 247 (457)
++++++.+. ++...|+++.++...|.+.| +++|.++|++||+++|+|+++. +|.. .+... ..
T Consensus 196 ~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv 275 (459)
T PRK05965 196 IIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGV 275 (459)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCC
Confidence 356777774 45788999999888888766 8999999999999999999986 4322 12121 23
Q ss_pred cccEEEecccc-ccCC-CCceEEEEecCCCccccccccC-CccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHH
Q 040741 248 NVSLMSLSGHK-IYGP-KGVGALYMRRRPRIRVEPLING-GGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITA 324 (457)
Q Consensus 248 ~~Di~~~s~~K-~~g~-~G~G~l~~~~~~~~~~~~~~~~-~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~ 324 (457)
.+|+++++ | +.|. ..+|+++++++..+.+.+.... +....+.. ...++..+++..++++.+++ +...++.++
T Consensus 276 ~PDiv~~g--Kgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T-~~gnpl~~Aaa~a~L~~l~~--~~l~~~~~~ 350 (459)
T PRK05965 276 VPDLMTVA--KGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYT-YSAHPVSAAVGLEVLRLYHE--GGLLANGQK 350 (459)
T ss_pred CCCeEEec--hhhccCCcceeEEEEcHHHHHHHhccccccccccccCC-CCCCHHHHHHHHHHHHHHHh--ccHHHHHHH
Confidence 58999887 9 4443 2589999988765444321000 00000111 24566677777778888876 466777888
Q ss_pred HHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcccc------------chHHHhcc--cCeEecccCccCCCCCChhH
Q 040741 325 LHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVE------------GESLLMGL--KEVAVSSGSACTSASLEPSY 390 (457)
Q Consensus 325 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l--~~i~~~~g~~~~~~~~~~~~ 390 (457)
+.+++.+.|++ +....++++ ....+.++.+.+.... ...+...+ +|+.+.+.
T Consensus 351 ~g~~l~~~l~~-l~~~~~v~~-vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~------------ 416 (459)
T PRK05965 351 AGPRFAAGLDA-LRAHPLVGD-VRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRAF------------ 416 (459)
T ss_pred HHHHHHHHHHh-hccCCCEEE-EeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEec------------
Confidence 88888888876 322212221 1222444444442110 01222222 56665421
Q ss_pred HHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 391 VLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 391 ~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
+.+.|||.++..+|++|||++++++.++++++
T Consensus 417 -----------g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~ 448 (459)
T PRK05965 417 -----------GDGVLGFAPALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred -----------CCcEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 12679999999999999999999999999876
No 311
>PRK12403 putative aminotransferase; Provisional
Probab=99.81 E-value=4e-17 Score=164.67 Aligned_cols=340 Identities=16% Similarity=0.119 Sum_probs=204.3
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChH
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGAT 128 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T 128 (457)
..+.-|+|+.+. +...|++.+++.+.+...... + ..++ ...+...++.++|+++++...+.++|+++||
T Consensus 51 ~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~--~--~~~~-~~~~~~~~lae~L~~~~p~~~~~v~f~~SGs 125 (460)
T PRK12403 51 NDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYY--N--MFFH-TTHPAVIELSELLFSLLPGHYSHAIYTNSGS 125 (460)
T ss_pred CCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCe--e--cccc-cCCHHHHHHHHHHHHhCCCCcCEEEEeCCcH
Confidence 345568885432 256799999999998763211 0 0001 1125677889999999874445699999999
Q ss_pred HHHHHHHHHhhhhh---cCCCCEEEE--cCCCCcchHHHHHHHHhcC--------cEEEEEeCCCC----CC--------
Q 040741 129 ESNNVSIKGVMHFY---KDKKRHVIT--TQTEHKCVLDSCRHLQQEG--------FEITYLPVGAD----GI-------- 183 (457)
Q Consensus 129 ~a~~~al~~~~~~~---~~~g~~vi~--~~~~h~~~~~~~~~~~~~G--------~~v~~v~~~~~----~~-------- 183 (457)
+|++.|++....+. +++++.+++ ....|.....++....... -.+..+|.+.. ..
T Consensus 126 eA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 205 (460)
T PRK12403 126 EANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGR 205 (460)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHH
Confidence 99999999887653 233344443 3445888777655431110 01223322110 00
Q ss_pred CCHHHHHHhcC----CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc--ccCC--CCccc
Q 040741 184 VNLDELRAAIR----PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP--VDVE--KWNVS 250 (457)
Q Consensus 184 ~d~~~le~~i~----~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~--~~~~--~~~~D 250 (457)
.+++++++.+. ++...|+++.+....|.+.| +++|.++|++||+++|+|++++ +|... +... ...+|
T Consensus 206 ~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PD 285 (460)
T PRK12403 206 RAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPD 285 (460)
T ss_pred HHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCC
Confidence 11355665552 45678999999988898887 9999999999999999999995 33221 1111 22479
Q ss_pred EEEeccccc-cCC-CCceEEEEecCCCccccccccCCccccccccC--CCChhHHHHHHHHHHHHHHhhHHHHHHHH-HH
Q 040741 251 LMSLSGHKI-YGP-KGVGALYMRRRPRIRVEPLINGGGQERGIRSG--TLPTPLIVGFGSACEIAKKEMDYDHKRIT-AL 325 (457)
Q Consensus 251 i~~~s~~K~-~g~-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~--t~~~~~~~al~~al~~~~~~~~~~~~~~~-~~ 325 (457)
+++++ |. .|. ..+|+++++++..+.+.+. +... ...+ ..++..+++..++++.++++ ...++.+ ++
T Consensus 286 iv~~g--K~lggG~~Piga~v~~~~i~~~~~~~--~~~~---~~~~T~~gnPl~~Aaala~L~~i~~~--~l~~~~~~~~ 356 (460)
T PRK12403 286 TLSIA--KGLTSGYVPMGGLVLSKRIAEALVEQ--GGVF---AHGLTYSGHPVAAAVAIANLKALRDE--GVVTRVKDDT 356 (460)
T ss_pred eEEEc--ccccccccceEEEEECHHHHHHHhcC--CCcc---ccCCCCCCCHHHHHHHHHHHHHHHhc--cHHHHHHHHH
Confidence 99755 94 333 2478888886654443221 1000 1112 35677788888888888763 3456664 66
Q ss_pred HHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccc--------hHHH----hc-c-cCeEecccCccCCCCCChhHH
Q 040741 326 HDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEG--------ESLL----MG-L-KEVAVSSGSACTSASLEPSYV 391 (457)
Q Consensus 326 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~----~~-l-~~i~~~~g~~~~~~~~~~~~~ 391 (457)
.+++++.|++......++++ ....+.++.+.|..... ..+. .. + +|+.+.+.
T Consensus 357 g~~l~~~L~~l~~~~~~i~~-vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~------------- 422 (460)
T PRK12403 357 GPYLQRCLREVFGDHPLVGE-VQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRST------------- 422 (460)
T ss_pred HHHHHHHHHHHHhcCCCEEe-EeecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEec-------------
Confidence 66666666541111111111 11224444455531100 0111 11 1 46655321
Q ss_pred HHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 392 LRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 392 l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
.+.+||++...+|++|+|+++++++++++++
T Consensus 423 -----------~~~~~l~Ppl~it~~eid~~~~~l~~al~~~ 453 (460)
T PRK12403 423 -----------LGRMIMAPALVAGRAEIDELVDKTRIAVDRT 453 (460)
T ss_pred -----------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 1468999999999999999999999999887
No 312
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.81 E-value=3.3e-18 Score=158.58 Aligned_cols=332 Identities=17% Similarity=0.175 Sum_probs=223.2
Q ss_pred EecCCCCCC----CCHHHHHHHHHHHhhc-cCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHH
Q 040741 60 YLDMQATTP----VDPRVLDAMLPFYLSR-YGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVS 134 (457)
Q Consensus 60 ~l~~~~~~~----~~~~v~~a~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~a 134 (457)
++|+++.+. ..+++.+.....++++ .|.-+. +.-|++.+.+.++++.||+++|++. .++-+-|-.++..+
T Consensus 96 ~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGP---rGFYGt~DvHldlE~~iakF~G~E~--aivYs~gF~ti~S~ 170 (467)
T KOG1358|consen 96 VLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGP---RGFYGTIDVHLDLEKRIAKFMGTED--AIVYSYGFSTIESA 170 (467)
T ss_pred eecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCC---CcccccceeecccHHHHHHhhCCcc--eeeeccccchhhhc
Confidence 455555442 2355555555555543 222111 1124566899999999999999975 44444456678888
Q ss_pred HHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCc-------------eEEE
Q 040741 135 IKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDT-------------GLIS 201 (457)
Q Consensus 135 l~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t-------------~li~ 201 (457)
+.++. ++||.+++....+.+...+.+.. .-.+.++..+ |++++|+.+.+.+ +.|+
T Consensus 171 ipafs----KrGDIi~~de~~nfaIq~GlqlS---RS~i~~Fkhn-----dm~~lerll~E~~~~~~K~~k~~~~Rrfiv 238 (467)
T KOG1358|consen 171 IPAFS----KRGDIIFVDEAVNFAIQKGLQLS---RSTISYFKHN-----DMEDLERLLPEQEDEDQKNPKKALTRRFIV 238 (467)
T ss_pred chhhh----ccCcEEEEehhhhHHHHHHHhhh---hheeEEecCC-----CHHHHHHhccCcchhhhhccccccceEEEE
Confidence 88888 89999999998888888777665 5577788766 8999988875432 5788
Q ss_pred EeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCc---------ccCCCCcccEEEeccccccCCCCceEEEEec
Q 040741 202 VMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIP---------VDVEKWNVSLMSLSGHKIYGPKGVGALYMRR 272 (457)
Q Consensus 202 i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~---------~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~ 272 (457)
++...-++|.+.|+++|.++..||...+++|+..++|... +++..-.+|++++|+.-..+..| |+.+++.
T Consensus 239 ~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G-gFc~G~~ 317 (467)
T KOG1358|consen 239 VEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG-GFCAGKS 317 (467)
T ss_pred EEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC-ceeecce
Confidence 8999999999999999999999999999999999876442 23332357999999876776664 7777643
Q ss_pred CCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccc
Q 040741 273 RPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIG 352 (457)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 352 (457)
- ......+.|.++ ..+.+.++....++..++.....+ +.+.+.++.....+.+.|.. ..++.+.+++.+ +
T Consensus 318 ~--i~~hQrLSg~~Y---~fSAslPp~la~aa~~ai~i~~~~-p~~~~~L~~k~~~~H~~l~~-~s~~~v~~~~~S---P 387 (467)
T KOG1358|consen 318 F--IADHQRLSGSGY---CFSASLPPYLAGAAIKAILIEEWN-PEIVQPLRAKVAKFHAALSS-NSGFIVSGSPES---P 387 (467)
T ss_pred e--eEeeeeccccce---eeeccCchhhhhhHHHHHHHHhhC-cchhhhhhccccccchhhhc-CCceEEecCcCC---c
Confidence 2 222222333333 334456666666666677665544 44777788888888888888 678899887664 4
Q ss_pred eEEEEEccc-----cchHHHhcc------cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHH
Q 040741 353 NLNLSFAYV-----EGESLLMGL------KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDR 421 (457)
Q Consensus 353 ~~~~~~~~~-----~~~~~~~~l------~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~ 421 (457)
++.+.+... +...+++.+ +++.+.... ++.. ...-.....|||+++..+++||+++
T Consensus 388 i~hl~l~~~~~s~e~e~~lL~eivd~~i~~~~ll~~a~-----------~~~~--~e~~~~~pSiri~~~a~~seeel~r 454 (467)
T KOG1358|consen 388 IIHLQLERSYGSREKEEKLLEEIVDKCIAEGVLLTRAK-----------YLEK--LERCPIPPSIRICVSAGMSEEELER 454 (467)
T ss_pred eeeeeecccccchHHHHHHHHHHHHHHHhhcceehhhh-----------hhhh--cccCCCCCcEEEEEeCCCCHHHHHH
Confidence 455555432 122333332 343332211 1111 1111123589999999999999999
Q ss_pred HHHHHHHHHHH
Q 040741 422 AIELTVKQVEK 432 (457)
Q Consensus 422 ~~~~l~~~~~~ 432 (457)
+++.+++....
T Consensus 455 a~~~ik~~~~~ 465 (467)
T KOG1358|consen 455 AAELIKEVASA 465 (467)
T ss_pred HHHHHHHHHHh
Confidence 99999987654
No 313
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.81 E-value=3.1e-17 Score=163.85 Aligned_cols=341 Identities=9% Similarity=0.039 Sum_probs=209.7
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChH
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGAT 128 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T 128 (457)
..+.-|||+.+. +...|++.+++.+.+.+.... .. .....+...++.+.|.+.+....+.+.|+++|+
T Consensus 41 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~-~~-----~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGs 114 (429)
T PRK06173 41 KDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHI-MF-----GGFTHEPAVELAQKLLEILPPSLNKIFFADSGS 114 (429)
T ss_pred CCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCc-cc-----cccCCHHHHHHHHHHHhhCCCCcCEEEEeCCch
Confidence 455568887553 366799999999998764211 10 011124567788888888754445799999999
Q ss_pred HHHHHHHHHhhhhhcC----CCCEEEEcCC-CCcchHHHHHHHH-----hcCc-----EEEEEeCCCC------CCCCHH
Q 040741 129 ESNNVSIKGVMHFYKD----KKRHVITTQT-EHKCVLDSCRHLQ-----QEGF-----EITYLPVGAD------GIVNLD 187 (457)
Q Consensus 129 ~a~~~al~~~~~~~~~----~g~~vi~~~~-~h~~~~~~~~~~~-----~~G~-----~v~~v~~~~~------~~~d~~ 187 (457)
+|++.|++..+.+... .+.+|+.... .|.....+..... ..++ .+..+|.+.. ..-+++
T Consensus 115 eAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~ 194 (429)
T PRK06173 115 VAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIE 194 (429)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHH
Confidence 9999999987765321 2355665554 5555444432210 0011 1223332211 011467
Q ss_pred HHHHhcC---CCceEEEEecc-ccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCC--c--ccCCCCcccEEEe
Q 040741 188 ELRAAIR---PDTGLISVMAV-NNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKI--P--VDVEKWNVSLMSL 254 (457)
Q Consensus 188 ~le~~i~---~~t~li~i~~~-~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~--~--~~~~~~~~Di~~~ 254 (457)
++++.+. ++...|+++.+ +...|.+.| ++++.++|++||+++|+|++|. +|.. . .......+|++++
T Consensus 195 ~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~ 274 (429)
T PRK06173 195 PLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPDIMCI 274 (429)
T ss_pred HHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCCCCCEEEe
Confidence 7788774 46788899986 777787755 8899999999999999999984 2221 1 1111235788875
Q ss_pred ccccc-cCC-CCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 040741 255 SGHKI-YGP-KGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNG 332 (457)
Q Consensus 255 s~~K~-~g~-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~ 332 (457)
.|. .|. ..++.++++++..+.+.+... ...... .....++..+++..++++.++++ ...++.+++.+++++.
T Consensus 275 --gK~l~gG~~p~~a~~~~~~i~~~~~~~~~-~~~~~~-~T~~g~p~~~aaa~a~l~~i~~~--~~~~~~~~~g~~l~~~ 348 (429)
T PRK06173 275 --GKALTGGYLTLSATITTEAIAQTICSGEA-KCFMHG-PTFMANPLACAIAAESIRLLLES--PWQQNIQRIEAQLKQE 348 (429)
T ss_pred --ehhhhCCccccceEEecHHHHHHHhcCCC-CccccC-CCCCcCHHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHH
Confidence 594 333 247888888765444322100 000000 01135677777788888888763 4577888888888888
Q ss_pred HhhcCCCeEEeCCCCCcccceEEEEEccc-cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEe
Q 040741 333 IKEKLDGVVVNGSMERRYIGNLNLSFAYV-EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFG 409 (457)
Q Consensus 333 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~ 409 (457)
|++ +.++..+++ ....+.++.+.+... ....+...+ +|+.+.+. .+.|||.
T Consensus 349 L~~-~~~~~~v~~-vRg~Gl~~~iel~~~~~~~~i~~~l~e~Gi~v~~~------------------------g~~l~~~ 402 (429)
T PRK06173 349 LAP-AAEFDSVAE-VRVLGAIGVVEMKEPVNMATLQPRFVEHGIWVRPF------------------------GKLVYIM 402 (429)
T ss_pred HHH-hhcCCCeee-eeccceEEEEEeCCcccHHHHHHHHHHCCeEEEec------------------------CCEEEEe
Confidence 875 322221211 111244444555422 223444444 57766431 1689999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 410 IGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 410 ~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
++..++++|+|+++++|++++++.
T Consensus 403 Ppl~it~~ei~~~~~~l~~~l~~~ 426 (429)
T PRK06173 403 PPFIISPDELSQLTSGLLRVLKQE 426 (429)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999764
No 314
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.81 E-value=9.4e-17 Score=161.56 Aligned_cols=350 Identities=13% Similarity=0.182 Sum_probs=212.9
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChH
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGAT 128 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T 128 (457)
..+.-|+|+.+. +...|++.+++.+.+.... .... +....+...++.++|.+.++...+.+.|++||+
T Consensus 50 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~-~~~~-----~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGs 123 (457)
T PRK05639 50 VDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQ-HSMI-----GYTHSERAIRVAEKLAEISPIENPKVLFGLSGS 123 (457)
T ss_pred CCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhcc-cccc-----CccCCHHHHHHHHHHHhhCCCCcCEEEEeCchH
Confidence 455568887543 2578999999999987532 1110 111124556788888888765445799999999
Q ss_pred HHHHHHHHHhhhhhcCCCCEEEEcC-CCCcchHHHHHHHH-----hcCc-----EEEEEeCCCCCC--------CCH---
Q 040741 129 ESNNVSIKGVMHFYKDKKRHVITTQ-TEHKCVLDSCRHLQ-----QEGF-----EITYLPVGADGI--------VNL--- 186 (457)
Q Consensus 129 ~a~~~al~~~~~~~~~~g~~vi~~~-~~h~~~~~~~~~~~-----~~G~-----~v~~v~~~~~~~--------~d~--- 186 (457)
+|++.|++....+ ..+.+||... ..|.....+..... ..++ .+..+|.+.... -|.
T Consensus 124 EA~e~AlklAr~~--tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 201 (457)
T PRK05639 124 DAVDMAIKVSKFS--TRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDEL 201 (457)
T ss_pred HHHHHHHHHHHHh--cCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHH
Confidence 9999999987754 3345566544 45665555443221 1111 233444331100 122
Q ss_pred -----HHHHHhc------CCCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc----ccCCC
Q 040741 187 -----DELRAAI------RPDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP----VDVEK 246 (457)
Q Consensus 187 -----~~le~~i------~~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~----~~~~~ 246 (457)
+.+++.+ .++...|+++.+....|.+.| +++|.++|++||+++|+|+++. +|... .....
T Consensus 202 ~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~g 281 (457)
T PRK05639 202 INRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFE 281 (457)
T ss_pred HHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcC
Confidence 3455544 356789999999988888776 8999999999999999999987 32111 11112
Q ss_pred CcccEEEecccc-ccCCCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 040741 247 WNVSLMSLSGHK-IYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITAL 325 (457)
Q Consensus 247 ~~~Di~~~s~~K-~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~ 325 (457)
..+|+++++ | +.|..++|+++++++..+... +. . ... ...++..+++..++++.+++ +...++.+++
T Consensus 282 v~PDiv~~g--K~l~gG~pi~av~~~~~i~~~~~----~~-~--~~T-~~g~p~~~aaa~a~l~~l~~--~~l~~~~~~~ 349 (457)
T PRK05639 282 VKPDLIIFG--KGVASGMGLSGVIGRKELMDLTS----GS-A--LLT-PAANPVISAAAEATLEIIEE--ENLLKNALKV 349 (457)
T ss_pred CCCCEEEec--hhhcCCCcceeEEehHHHHhhcC----CC-c--ccC-CCcCHHHHHHHHHHHHHHHH--ccHHHHHHHH
Confidence 358998865 9 443445899999887655211 10 0 111 23456667777778887766 4455666667
Q ss_pred HHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcccc-------chHHHhcc--cCeEecccCccCCCCCChhHHHHHcC
Q 040741 326 HDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVE-------GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALG 396 (457)
Q Consensus 326 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g 396 (457)
.+++++.|++......++++ ....+.++.+.+.... ...+...+ +|+.+.+. |
T Consensus 350 g~~l~~~L~~l~~~~~~~~~-VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~-----------------g 411 (457)
T PRK05639 350 GEFIKKRLLEMKESFEVIGD-VRGKGLMIGVEIVKENGKPDPELTGKICWRAFELGLILPSY-----------------G 411 (457)
T ss_pred HHHHHHHHHHHHHhCCCEEe-eccceeEEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeec-----------------C
Confidence 77777777651111222221 1122444444442110 11223233 56666421 0
Q ss_pred CCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHhcChhHHHHHhcCCccccccc
Q 040741 397 VDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLREMSPLYEMVKEGIDIKQIQWA 455 (457)
Q Consensus 397 ~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (457)
...+.|||.++..+|++|||+++++|+++++.+.. ...|-|-++|.
T Consensus 412 ----~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~~~---------~~~~~~~~~~~ 457 (457)
T PRK05639 412 ----MFGNVIRITPPLVITKEIAEKGLEIMERAIKDALA---------GKVERKVVTWH 457 (457)
T ss_pred ----CCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHHH---------hhccccccCCC
Confidence 11279999999999999999999999999987632 23446666773
No 315
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.81 E-value=1.4e-17 Score=158.12 Aligned_cols=312 Identities=21% Similarity=0.227 Sum_probs=221.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCC-cEEEeCChHHHHHHHHHHhhhhhcC----CCCEEEEcCCCCcchHHHHHHHHhcCcEE
Q 040741 99 SEVAVETARSQIADLIGASPK-EIIFTSGATESNNVSIKGVMHFYKD----KKRHVITTQTEHKCVLDSCRHLQQEGFEI 173 (457)
Q Consensus 99 ~~~~~~~~~~~la~~~g~~~~-~i~~t~g~T~a~~~al~~~~~~~~~----~g~~vi~~~~~h~~~~~~~~~~~~~G~~v 173 (457)
......++...++.+++.+++ ....|+|+|+++.++-+.-....++ ....+++....|.+...+++++ +.++
T Consensus 118 ~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf---~v~l 194 (491)
T KOG1383|consen 118 VRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYF---EVEL 194 (491)
T ss_pred hHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhE---EEEE
Confidence 346677788899999998755 3688889999976666654433222 2467888999999999999998 9999
Q ss_pred EEEeCC-CCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHh-cCCcEEEehhhhcCCC--------ccc
Q 040741 174 TYLPVG-ADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKE-FKIPFHTDAAQALGKI--------PVD 243 (457)
Q Consensus 174 ~~v~~~-~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~-~~v~li~D~a~~~g~~--------~~~ 243 (457)
..++.+ .+..+|+..+.+.++++|.+++.+.++.|+|.+.|+++|.++.-+ +++++|+|++.+.... +++
T Consensus 195 ~~V~~~~~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fd 274 (491)
T KOG1383|consen 195 REVPLDEGDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFD 274 (491)
T ss_pred EeeeccccceEecHHHHHHHhccceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccccc
Confidence 999998 678999999999999999999999999999999999999999888 9999999999875433 345
Q ss_pred CCCCcccEEEecccc-ccCCCCceEEEEecCCCccc----cccccCCccccccccCC-CChhHHHHHHHHHHHHHHhhHH
Q 040741 244 VEKWNVSLMSLSGHK-IYGPKGVGALYMRRRPRIRV----EPLINGGGQERGIRSGT-LPTPLIVGFGSACEIAKKEMDY 317 (457)
Q Consensus 244 ~~~~~~Di~~~s~~K-~~g~~G~G~l~~~~~~~~~~----~~~~~~~~~~~~~~~~t-~~~~~~~al~~al~~~~~~~~~ 317 (457)
+...++-.++.+.|| .+.|.|.|+++-+.+....- .....|+-+...--.|+ +....++.+.+-+.+..+++.+
T Consensus 275 Fr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~ 354 (491)
T KOG1383|consen 275 FRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRE 354 (491)
T ss_pred cCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHH
Confidence 555567788999999 68899999998876532211 12222332222111122 2233344444455666778999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHHhcccCeEecccCccCCCCCChhHHHHHcCC
Q 040741 318 DHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGLKEVAVSSGSACTSASLEPSYVLRALGV 397 (457)
Q Consensus 318 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~l~~~g~ 397 (457)
..+++.+.++.+++.|++ +.++.+++.+. ..++.+.-...+-..+.+.|++. |. .+.++..
T Consensus 355 ~~~~ive~~~~l~egie~-i~~i~i~gkp~---vs~~~~~s~~~~i~elsd~l~~~----GW-----------~lnalq~ 415 (491)
T KOG1383|consen 355 NTQNIVETARKLREGIEN-IKGIKIVGKPL---VSFILFGSNDVNIFELSDLLRKK----GW-----------ILNALQF 415 (491)
T ss_pred HHHHHHHHHHHHHHhhhc-cccceecCCCc---EEEEEccCCccchhhhhHHHHhc----Cc-----------CccccCC
Confidence 999999999999999999 99999999732 11111111223333343333211 10 1112222
Q ss_pred CccCCCCeEEEecCCCCCHHH-HHHHHHHHHHHHHHHHhcC
Q 040741 398 DEDMAHTSIRFGIGRFTTEAE-VDRAIELTVKQVEKLREMS 437 (457)
Q Consensus 398 ~~~~~~~~iRi~~~~~~t~ed-id~~~~~l~~~~~~~~~~~ 437 (457)
+ ..+.|++...+.+++ .|+++..++++++++....
T Consensus 416 P-----~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~p 451 (491)
T KOG1383|consen 416 P-----AAIHICVTRVHAREDVADRFVADIRKVVEELKSLP 451 (491)
T ss_pred C-----CceEEEEEeeeccHHHHHHHHHHHHHHHHHHHhCC
Confidence 2 478888888776666 5889999999999886543
No 316
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.81 E-value=2.4e-17 Score=164.41 Aligned_cols=340 Identities=10% Similarity=0.055 Sum_probs=206.4
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChH
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGAT 128 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T 128 (457)
..+.-|||+.+. +...|++.+++.+.+.+...... +....+...++.++|+++++...+.++|++||+
T Consensus 40 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~------~~~~~~~~~~la~~L~~~~p~~~~~v~f~~SGs 113 (428)
T PRK07986 40 ADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMF------GGITHPPAIELCRKLVAMTPQPLECVFLADSGS 113 (428)
T ss_pred CCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccc------cccCCHHHHHHHHHHHhhCCCCcCEEEEeCCcH
Confidence 445568887543 35679999999999876421111 011124567788888888764445799999999
Q ss_pred HHHHHHHHHhhhhhc---CCCCEEEEcCC-CCcchHHHHHHHHh-----cC-----cEEEEEeCCCC------CCCCHHH
Q 040741 129 ESNNVSIKGVMHFYK---DKKRHVITTQT-EHKCVLDSCRHLQQ-----EG-----FEITYLPVGAD------GIVNLDE 188 (457)
Q Consensus 129 ~a~~~al~~~~~~~~---~~g~~vi~~~~-~h~~~~~~~~~~~~-----~G-----~~v~~v~~~~~------~~~d~~~ 188 (457)
+|++.|++....+.. .++.+||.... .|.....+...... .. ..+..++.... ..-|+++
T Consensus 114 EAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~ 193 (428)
T PRK07986 114 VAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAP 193 (428)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHH
Confidence 999999998775532 22456665554 45544443322110 00 01222332211 1236778
Q ss_pred HHHhcC---CCceEEEEecc-ccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCC--cc--cCCCCcccEEEec
Q 040741 189 LRAAIR---PDTGLISVMAV-NNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKI--PV--DVEKWNVSLMSLS 255 (457)
Q Consensus 189 le~~i~---~~t~li~i~~~-~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~--~~--~~~~~~~Di~~~s 255 (457)
+++.++ ++...|+++.+ +...|.+.| +++|.++|++||+++|+|+++. +|.. .+ ......+|++++
T Consensus 194 l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~t~- 272 (428)
T PRK07986 194 FARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPDILCL- 272 (428)
T ss_pred HHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCCCEEEe-
Confidence 888875 45678888885 565676543 8999999999999999999984 3321 11 122234788865
Q ss_pred cccc-cCC-CCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 040741 256 GHKI-YGP-KGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGI 333 (457)
Q Consensus 256 ~~K~-~g~-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l 333 (457)
.|. .|. ..+|+++++++..+.+.....+ ....+... +.++..+++..++++.++++ ...++.+++.+++++.|
T Consensus 273 -gK~l~gG~~p~~av~~~~~i~~~~~~~~~~-~~~~~~T~-~g~p~~~aaa~a~L~~i~~~--~~~~~~~~~g~~l~~~l 347 (428)
T PRK07986 273 -GKALTGGTMTLSATLTTREVAETISNGEAG-CFMHGPTF-MGNPLACAVANASLSLLESG--DWQQQVAAIEAQLREEL 347 (428)
T ss_pred -chhhhCCcccCcchhchHHHHHHhhcCCCC-ccccCCCC-CcCHHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHH
Confidence 594 333 2478888887765555431100 00011111 35677777777888888763 55778888888888887
Q ss_pred hhcCCCeEEeCCCCCcccceEEEEEccc-cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEec
Q 040741 334 KEKLDGVVVNGSMERRYIGNLNLSFAYV-EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGI 410 (457)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~ 410 (457)
++ +.....+++ ....+.++.+.+... ....+...+ +|+.+.+. .+.|||.+
T Consensus 348 ~~-l~~~~~i~~-vRg~Gl~~~ve~~~~~~~~~~~~~l~~~Gl~~~~~------------------------g~~i~~~P 401 (428)
T PRK07986 348 AP-LRDAPMVAD-VRVLGAIGVVETTRPVNMAALQRFFVEQGVWIRPF------------------------GKLIYLMP 401 (428)
T ss_pred HH-HhcCCCEEe-EeccceEEEEEeCCcccHHHHHHHHHHCCcEEEec------------------------CCEEEEeC
Confidence 76 322111121 111233444444321 123344444 56665421 16899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHH
Q 040741 411 GRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 411 ~~~~t~edid~~~~~l~~~~~~ 432 (457)
+..+|++||+++++++.++++.
T Consensus 402 pl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 402 PYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred CCCCCHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999853
No 317
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.81 E-value=9.2e-17 Score=160.28 Aligned_cols=334 Identities=13% Similarity=0.158 Sum_probs=200.6
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCC--C-CcEEE-e
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGAS--P-KEIIF-T 124 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~--~-~~i~~-t 124 (457)
..+.-|+|+.+. +..+|++.+++.+.+.+. +..+. ... ..+...++.++|++.+..+ . +.+.| +
T Consensus 32 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~-~~~~~----~~~-~~~~~~~lae~l~~~~~~~~~~~~~~~f~~ 105 (412)
T TIGR02407 32 EDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADD-GIIHS----LDM-ATEAKREFLETFNEIILKPRGLDYKVQFPG 105 (412)
T ss_pred CCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhc-cceec----ccc-CcHHHHHHHHHHHHhccCccCCCceEEEeC
Confidence 345568887543 367899999999998752 11110 011 1245566777777764221 1 23666 5
Q ss_pred CChHHHHHHHHHHhhhhhcCCCCEEEEcC-CCCcchHHHHHHHH----hcCc-----EEEEEeCCCC---CCCCHHHHHH
Q 040741 125 SGATESNNVSIKGVMHFYKDKKRHVITTQ-TEHKCVLDSCRHLQ----QEGF-----EITYLPVGAD---GIVNLDELRA 191 (457)
Q Consensus 125 ~g~T~a~~~al~~~~~~~~~~g~~vi~~~-~~h~~~~~~~~~~~----~~G~-----~v~~v~~~~~---~~~d~~~le~ 191 (457)
++|++|++.|++....+ ..+.+||... ..|.....+..... ..++ .+..+|.+.. ..-+++.+++
T Consensus 106 ~sGseA~e~AlklAr~~--tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~ 183 (412)
T TIGR02407 106 PTGTNAVESALKLARKV--TGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEK 183 (412)
T ss_pred CCchHHHHHHHHHHhhh--cCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHH
Confidence 89999999999987754 2345666544 45555555443321 1111 2233333210 0124777888
Q ss_pred hcC------CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCC----cccCCCCcccEEEecc
Q 040741 192 AIR------PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKI----PVDVEKWNVSLMSLSG 256 (457)
Q Consensus 192 ~i~------~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~----~~~~~~~~~Di~~~s~ 256 (457)
.+. ++.+.|+++.+.++.|.+.| +++|.++|++||+++|+|++++ +|.. ........+|+++++
T Consensus 184 ~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PDi~~~~- 262 (412)
T TIGR02407 184 LLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPDIVCLS- 262 (412)
T ss_pred HHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCCEEEec-
Confidence 885 35688899999999998654 8999999999999999999986 4321 122233468988765
Q ss_pred ccccCCCC--ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHH
Q 040741 257 HKIYGPKG--VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEI-AKKEMDYDHKRITALHDRLLNGI 333 (457)
Q Consensus 257 ~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~-~~~~~~~~~~~~~~~~~~l~~~l 333 (457)
|.+|+.| +|+++++++. ..+.+...+. ....++..+++..++++. +.+ ....++.+++.+++++.|
T Consensus 263 -K~lg~~G~pigav~~~~~~-~~~~~~~~~~-------T~~gnpl~~aaa~a~l~~~i~~--~~l~~~~~~~g~~l~~~l 331 (412)
T TIGR02407 263 -KSISGYGLPLALTLIKPEL-DVWKPGEHNG-------TFRGNNLAFVTATAALEYYWSD--DAFEKAVQRKSEIIQERL 331 (412)
T ss_pred -hhccCCccceeEEEEchhh-hccCCCccCC-------CCCccHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHH
Confidence 9655433 8999998764 3332211111 113455566666677774 443 344555566666665555
Q ss_pred hh---cCCCeEEeCCCCCcccceEEEEEcccc-chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEE
Q 040741 334 KE---KLDGVVVNGSMERRYIGNLNLSFAYVE-GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIR 407 (457)
Q Consensus 334 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iR 407 (457)
+. .++++... ....+.++.+.+.... ...+...+ +||.+.+.. ...+.||
T Consensus 332 ~~l~~~~~~~~~~---vrg~Gl~~~l~l~~~~~~~~~~~~~~~~Gv~v~~~~---------------------~~~~~lr 387 (412)
T TIGR02407 332 DRIVAEYPELIKQ---VRGRGLMQGIECGDGDLAGKIAKAAFENGLIIETSG---------------------PNDEVIK 387 (412)
T ss_pred HHHHhhCCCceEe---eecceeEEEEEecChHHHHHHHHHHHHCCCEEeccC---------------------CCCCEEE
Confidence 43 14433221 1112444455554221 23344444 577765321 1126899
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 408 FGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 408 i~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
|.++..+|++|+|++++++++++++
T Consensus 388 ~~p~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 388 LLPPLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999998863
No 318
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.81 E-value=8.1e-17 Score=157.13 Aligned_cols=313 Identities=13% Similarity=0.119 Sum_probs=196.9
Q ss_pred CCcEEecCCC------CCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHH
Q 040741 56 GRPLYLDMQA------TTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATE 129 (457)
Q Consensus 56 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~ 129 (457)
.+.-|||+.+ -+...|++.+++.+.+.+..-. . . . +. .+...++.++++++++.+ .++|+++||+
T Consensus 22 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~-~--~-~--~~-~~~~~~la~~l~~~~~~~--~v~~~~SGse 92 (364)
T PRK04013 22 QGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVA-G--P-M--FE-HEEKEEMLEELSKWVNYE--YVYMGNSGTE 92 (364)
T ss_pred CCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCc-c--C-C--cC-CHHHHHHHHHHHhhcCCC--EEEEeCchHH
Confidence 4446888644 2357799999999998764211 0 0 1 11 256778889999998754 5999999999
Q ss_pred HHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHH-H----hcCcE-----EEEEeCCCCCCCCHHHHHHhcCCCceE
Q 040741 130 SNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHL-Q----QEGFE-----ITYLPVGADGIVNLDELRAAIRPDTGL 199 (457)
Q Consensus 130 a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~-~----~~G~~-----v~~v~~~~~~~~d~~~le~~i~~~t~l 199 (457)
|++.+++....+ ..+++||+....|.+.......+ . ..++. +..++. .|++++++.+.++++.
T Consensus 93 A~e~Alklar~~--~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~i~~~~aA 165 (364)
T PRK04013 93 AVEAALKFARLY--TGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF-----NDVEAAKEAITKETAA 165 (364)
T ss_pred HHHHHHHHHHHH--hCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC-----CCHHHHHHHhcCCcEE
Confidence 999999987754 23467776665544443332221 0 01222 222222 2789999999889999
Q ss_pred EEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhhc---CCC-cccCCCCcccEEEeccccc-cCCCCceEEEE
Q 040741 200 ISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQAL---GKI-PVDVEKWNVSLMSLSGHKI-YGPKGVGALYM 270 (457)
Q Consensus 200 i~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~~---g~~-~~~~~~~~~Di~~~s~~K~-~g~~G~G~l~~ 270 (457)
|+++++....|...+ +++|.++|++||+++|+|++++. |.. ........+|+++++ |. .|.-.+|+++.
T Consensus 166 vivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~~~a~~~~gv~PDiv~~g--K~lggG~P~~a~~~ 243 (364)
T PRK04013 166 VIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGKFLAIEHYKVEPDIVTMG--KGIGNGVPVSLTLT 243 (364)
T ss_pred EEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCchhHHHhcCCCCCEEEec--ccccCCceeEEEEe
Confidence 999999887777654 99999999999999999999873 211 111122357888886 94 33334788887
Q ss_pred ecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcc
Q 040741 271 RRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRY 350 (457)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 350 (457)
+++. .+...+ .....++..+++..+.++.++++ ...++.++. + +.+.. +. +++ ....
T Consensus 244 ~~~~----~~~~~~-------~T~~gnp~~~aaa~a~l~~i~~~--~l~~~~~~~---l-~~l~~--~~---v~~-vRG~ 300 (364)
T PRK04013 244 NFDV----ERGKHG-------STFGGNPLACKAVAVTLRILRRE--RLVEKAGEK---F-IEIKG--ER---VVT-TRGR 300 (364)
T ss_pred cccc----cCCCcC-------CCCCcCHHHHHHHHHHHHHHHhc--cHHHHHHHH---H-HHhcc--Cc---cee-eeeC
Confidence 7653 111111 11245667777777788888763 333333332 2 22222 21 111 1222
Q ss_pred cceEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHH
Q 040741 351 IGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVK 428 (457)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~ 428 (457)
+.++.+.+... ...+...+ +|+.+... +.+.|||.++..+|++|++.+++++++
T Consensus 301 Gl~~gve~~~~-~~~i~~~~~~~Gll~~~~-----------------------g~~vlr~~Ppl~it~~~i~~~~~~l~~ 356 (364)
T PRK04013 301 GLMIGIVLKKP-VGKYVEELQNRGYLVHTA-----------------------GQRVIRLLPPLIISKDTMEEAKSAIEG 356 (364)
T ss_pred cEEEEEEeCCc-HHHHHHHHHhCCcEEeeC-----------------------CCCEEEEeCCcccCHHHHHHHHHHHHH
Confidence 44455555321 23344433 56665321 126899999999999999999999999
Q ss_pred HHHHH
Q 040741 429 QVEKL 433 (457)
Q Consensus 429 ~~~~~ 433 (457)
+++++
T Consensus 357 ~l~~~ 361 (364)
T PRK04013 357 VINDI 361 (364)
T ss_pred HHHHH
Confidence 99764
No 319
>PRK07482 hypothetical protein; Provisional
Probab=99.81 E-value=2.4e-17 Score=166.32 Aligned_cols=344 Identities=15% Similarity=0.108 Sum_probs=207.4
Q ss_pred ccCCCcEEecCCCC------CCCCHHHHHHHHHHHhhcc-CCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeC
Q 040741 53 RIAGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRY-GNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTS 125 (457)
Q Consensus 53 ~~~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~ 125 (457)
....+.-|+|+.+. +..+|++.+++.+.+.... ..+. .++ ..+...++.++|++++..+.+.++|++
T Consensus 45 ~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~-----~~~-~~~~~~~lAe~L~~~~p~~~~~v~f~~ 118 (461)
T PRK07482 45 TDAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTY-----VGH-GTEASITLSKRIIDRAPAGMSKVYYGL 118 (461)
T ss_pred EECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccc-----ccc-CCHHHHHHHHHHHHhCCCCcCEEEEeC
Confidence 33455568887654 3578999999999987641 1110 011 125667788888888754445699999
Q ss_pred ChHHHHHHHHHHhhhhhc---C-CCCEEEEcCC-CCcchHHHHHHHH----hc--C---cEEEEEeCCC--C----C---
Q 040741 126 GATESNNVSIKGVMHFYK---D-KKRHVITTQT-EHKCVLDSCRHLQ----QE--G---FEITYLPVGA--D----G--- 182 (457)
Q Consensus 126 g~T~a~~~al~~~~~~~~---~-~g~~vi~~~~-~h~~~~~~~~~~~----~~--G---~~v~~v~~~~--~----~--- 182 (457)
|||+|++.|++....+.. . .+.+||.... .|.....+..... .. + ..+..++.+. . +
T Consensus 119 sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 198 (461)
T PRK07482 119 SGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSE 198 (461)
T ss_pred chHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCH
Confidence 999999999998775431 1 2456666554 5554443322110 00 1 1122222221 1 0
Q ss_pred ----CCCHHHHHHhcC----CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc--cc--CC
Q 040741 183 ----IVNLDELRAAIR----PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP--VD--VE 245 (457)
Q Consensus 183 ----~~d~~~le~~i~----~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~--~~--~~ 245 (457)
.-+++++++++. ++...|+++.+....|.+.| +++|.++|++||+++|+|+++. +|... +. ..
T Consensus 199 ~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~ 278 (461)
T PRK07482 199 EQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHY 278 (461)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhc
Confidence 014677888773 45789999999888888865 8899999999999999999986 43221 11 12
Q ss_pred CCcccEEEecccc-ccCC-CCceEEEEecCCCcccccccc-CCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHH
Q 040741 246 KWNVSLMSLSGHK-IYGP-KGVGALYMRRRPRIRVEPLIN-GGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRI 322 (457)
Q Consensus 246 ~~~~Di~~~s~~K-~~g~-~G~G~l~~~~~~~~~~~~~~~-~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~ 322 (457)
...+|+++++ | +.|. ..+|+++++++..+.+..... .+....+.. ...++..+++..++++.+++ +...++.
T Consensus 279 gv~PDiv~~g--Kgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T-~~gnpl~~Aaa~a~L~~~~~--~~l~~~~ 353 (461)
T PRK07482 279 GIEPDLITVA--KGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWT-YSGHPICAAAALANLDILER--ENLVGNA 353 (461)
T ss_pred CCCCCEEEEc--cccccCccccceeeecHHHHHHHhcccccCCccccCCC-CCcCHHHHHHHHHHHHHHHh--CCHHHHH
Confidence 2358999887 9 4333 248888888765443321100 000000111 14566777777788888876 4555666
Q ss_pred HHHHHHHHHHHhhc---CCCeEEeCCCCCcccceEEEEEcccc------------chHHHhcc--cCeEecccCccCCCC
Q 040741 323 TALHDRLLNGIKEK---LDGVVVNGSMERRYIGNLNLSFAYVE------------GESLLMGL--KEVAVSSGSACTSAS 385 (457)
Q Consensus 323 ~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l--~~i~~~~g~~~~~~~ 385 (457)
+++.+++.+.|.+. .+.+ ++ ....+.++.+.+.... ...+...+ +|+.+..+.
T Consensus 354 ~~~g~~l~~~L~~l~~~~~~v---~~-vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~~------ 423 (461)
T PRK07482 354 AEVGAYFRARLRAAFGDHPLV---GE-VRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARAMP------ 423 (461)
T ss_pred HHHHHHHHHHHHHHHhcCCCE---EE-EeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecCC------
Confidence 67777777766541 3322 11 1122444445553110 01222222 455543210
Q ss_pred CChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 386 LEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 386 ~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
..+.+||.++..+|++|||+++++++++++++
T Consensus 424 ----------------~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 424 ----------------HGDILGFAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred ----------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 12689999999999999999999999999876
No 320
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.81 E-value=8e-17 Score=161.49 Aligned_cols=335 Identities=15% Similarity=0.168 Sum_probs=200.1
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCC--CC-cEEE-e
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGAS--PK-EIIF-T 124 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~--~~-~i~~-t 124 (457)
..+.-|+|+.+. +..+|++.+++.+.+... +..+ .... ..+...++.+++++.+..+ .+ .+.| +
T Consensus 36 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~-~~~~----~~~~-~~~~~~~lae~l~~~~~~~~~~~~~~~f~~ 109 (425)
T PRK09264 36 EDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRD-GITH----GLDM-HTTAKREFLETFEETILKPRGLDYKVQFTG 109 (425)
T ss_pred CCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhc-cccc----cccc-CcHHHHHHHHHHHHhhcCCcCCCceEEEeC
Confidence 344568886443 357899999999998752 1111 1011 1245566777777765322 22 4666 5
Q ss_pred CChHHHHHHHHHHhhhhhcCCCCEEEEcCC-CCcchHHHHHHHH----hc--C---cEEEEEeCCCC---CCCCHHHHHH
Q 040741 125 SGATESNNVSIKGVMHFYKDKKRHVITTQT-EHKCVLDSCRHLQ----QE--G---FEITYLPVGAD---GIVNLDELRA 191 (457)
Q Consensus 125 ~g~T~a~~~al~~~~~~~~~~g~~vi~~~~-~h~~~~~~~~~~~----~~--G---~~v~~v~~~~~---~~~d~~~le~ 191 (457)
+|||+|++.|++....+ ..+.+||.... .|.....+..... .. | ..+..+|.+.. ..-|++++++
T Consensus 110 ~sGseA~e~AlklAr~~--tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~ 187 (425)
T PRK09264 110 PTGTNAVEAALKLARKV--TGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEK 187 (425)
T ss_pred CCHHHHHHHHHHHHHHh--cCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHH
Confidence 89999999999987754 33456665544 5555554433321 11 1 12344444311 0136788888
Q ss_pred hcC------CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCC----cccCCCCcccEEEecc
Q 040741 192 AIR------PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKI----PVDVEKWNVSLMSLSG 256 (457)
Q Consensus 192 ~i~------~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~----~~~~~~~~~Di~~~s~ 256 (457)
.+. ++...|+++.+....|.+.+ +++|.++|++||+++|+|++++ +|.. ..+.....+|+++++
T Consensus 188 ~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PDi~t~~- 266 (425)
T PRK09264 188 LLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPDIVTLS- 266 (425)
T ss_pred HHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCCEEEec-
Confidence 884 24678999999988887653 9999999999999999999996 3211 112223357887665
Q ss_pred ccccCCCC--ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHH-HHHHHhhHHHHHHHHHHHHHHHHHH
Q 040741 257 HKIYGPKG--VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSAC-EIAKKEMDYDHKRITALHDRLLNGI 333 (457)
Q Consensus 257 ~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al-~~~~~~~~~~~~~~~~~~~~l~~~l 333 (457)
|.+|+.| +|+++++++. ..+.+...+ .. ...++..+++..+++ +.+.+ ....++.+++.+++++.|
T Consensus 267 -K~l~~~G~pigav~~~~~i-~~~~~~~~~------~T-~~gnp~~~aaa~a~l~~~~~~--~~l~~~~~~~g~~l~~~l 335 (425)
T PRK09264 267 -KSISGYGLPMALVLIKPEL-DVWKPGEHN------GT-FRGNNLAFVTATAALEEYWSD--DAFEKEVKAKGELVRERL 335 (425)
T ss_pred -cccCCCccceEEEEEchhh-hccCCCccC------CC-CCCCHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHH
Confidence 9666544 6999998764 332221111 11 133445555555666 33333 356666777777777766
Q ss_pred hh---cCCCeEEeCCCCCcccceEEEEEcccc-chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEE
Q 040741 334 KE---KLDGVVVNGSMERRYIGNLNLSFAYVE-GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIR 407 (457)
Q Consensus 334 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iR 407 (457)
++ .++.+. .+ ....+.++.+.+.... ...+...+ +|+.+.+... ....||
T Consensus 336 ~~l~~~~~~~~--~~-vrg~Gl~~~i~l~~~~~~~~l~~~~~~~Gv~~~~~~~---------------------~~~~lr 391 (425)
T PRK09264 336 EEIAAKYPGLG--AE-VRGRGMMQGIDFGDGELAGKIAAEAFENGLIIETSGP---------------------EDEVVK 391 (425)
T ss_pred HHHHHhCCCce--ec-ceecccEEEEEecChHHHHHHHHHHHHCCCEEeccCC---------------------CCCEEE
Confidence 54 133221 11 1122444455553221 22344444 5766643210 126899
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 408 FGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 408 i~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
|+++..+|++||++++++|+++++++
T Consensus 392 ~~p~l~~t~~ei~~~~~~l~~~l~~~ 417 (425)
T PRK09264 392 LLPPLTIDEEELEEGLDILEEAVAEV 417 (425)
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999876
No 321
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.81 E-value=6.2e-17 Score=162.84 Aligned_cols=340 Identities=14% Similarity=0.109 Sum_probs=207.3
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChH
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGAT 128 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T 128 (457)
..+.-|+|+.+. +..+|++.+++.+.+....-... .+.. .+...++.++|++.++...+.++|+++||
T Consensus 51 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~-----~~~~-~~~~~~lAe~L~~~~p~~~~~v~f~~sGs 124 (453)
T PRK06943 51 RDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAML-----AGCT-HEPAIELAERLAALTGGTLGHAFFASDGA 124 (453)
T ss_pred CCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccc-----cccC-CHHHHHHHHHHHHhCCCCCCEEEEeCCCH
Confidence 345568887543 36789999999999875311000 0111 14556788888888764435699999999
Q ss_pred HHHHHHHHHhhhhhc----CCCCEEEEcCC-CCcchHHHHHHHHh----cCc-----EEEEEeCCCC-C-----------
Q 040741 129 ESNNVSIKGVMHFYK----DKKRHVITTQT-EHKCVLDSCRHLQQ----EGF-----EITYLPVGAD-G----------- 182 (457)
Q Consensus 129 ~a~~~al~~~~~~~~----~~g~~vi~~~~-~h~~~~~~~~~~~~----~G~-----~v~~v~~~~~-~----------- 182 (457)
+|++.|++....++. ..+.+||.... .|.....+...... .++ .+..++.+.. +
T Consensus 125 eAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 204 (453)
T PRK06943 125 SAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVA 204 (453)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHH
Confidence 999999998764431 12456666555 45444443322210 011 1223332211 0
Q ss_pred CCCHHHHHHhcC---CCceEEEEec-cccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc--c--cCCCCcc
Q 040741 183 IVNLDELRAAIR---PDTGLISVMA-VNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP--V--DVEKWNV 249 (457)
Q Consensus 183 ~~d~~~le~~i~---~~t~li~i~~-~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~--~--~~~~~~~ 249 (457)
.-|+++++++++ ++...|+++. ++...|.+.| ++++.++|++||+++|+|+++. +|... + ......+
T Consensus 205 ~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~P 284 (453)
T PRK06943 205 ARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWP 284 (453)
T ss_pred HHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCC
Confidence 013577777775 4678889998 4777888765 8999999999999999999985 44321 1 1112358
Q ss_pred cEEEecccc-ccCC-CCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 040741 250 SLMSLSGHK-IYGP-KGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHD 327 (457)
Q Consensus 250 Di~~~s~~K-~~g~-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~ 327 (457)
|+++++ | +.|. ..+|+++++++..+.+.+....+....+.. ...++..+++..+.++.+++ +...++.+++.+
T Consensus 285 Divt~g--Kgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T-~~gnpl~~aaa~a~L~~i~~--~~l~~~~~~~G~ 359 (453)
T PRK06943 285 DFLCLS--KGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHS-YTGNPLACRAALATLDLFAE--DDVLARNARKSA 359 (453)
T ss_pred CeEeee--hhhccCcccceEEEEcHHHHHhhcccCccCCccCCCC-CCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHH
Confidence 999887 9 4443 248999998876554432110000000011 13466677777788888876 456667777777
Q ss_pred HHHHHHhhc--CCCeEEeCCCCCcccceEEEEEcc-cc-c----hHHHhcc--cCeEecccCccCCCCCChhHHHHHcCC
Q 040741 328 RLLNGIKEK--LDGVVVNGSMERRYIGNLNLSFAY-VE-G----ESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGV 397 (457)
Q Consensus 328 ~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~-~----~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~ 397 (457)
++.+.|++. .+.+. .....+.++.+.+.. .+ . ..+...+ +|+.+.+.
T Consensus 360 ~l~~~L~~l~~~~~v~----~vrG~Gl~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~------------------- 416 (453)
T PRK06943 360 RLRAALAPLAAHPQVR----HLRQRGTIFAFDVALDGDAARTFSRRFFEAALERELLLRPI------------------- 416 (453)
T ss_pred HHHHHHHHHhcCCCEE----eEeccccEEEEEEccCCCcchHHHHHHHHHHHHCCcEEEec-------------------
Confidence 777777651 23321 111224444455531 11 1 1222222 56655321
Q ss_pred CccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 398 DEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 398 ~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
.+.+||+++..+|++|||+++++++++++++
T Consensus 417 -----g~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 417 -----GTTVYLMPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred -----CCEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 1569999999999999999999999999875
No 322
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.81 E-value=1.5e-16 Score=159.53 Aligned_cols=333 Identities=14% Similarity=0.087 Sum_probs=199.9
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCC-CCCcEEEeCCh
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGA-SPKEIIFTSGA 127 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~-~~~~i~~t~g~ 127 (457)
..+.-|+|+.+. +...|++.+++.+.+.+.. .... .....+...++.++|.+++.. ..+.++|+++|
T Consensus 30 ~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~-~~~~-----~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sG 103 (420)
T TIGR00700 30 VDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFT-HTCF-----MVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSG 103 (420)
T ss_pred CCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhcc-Cccc-----cccCChHHHHHHHHHHHhCCCCCCCEEEEeCCc
Confidence 345568886543 3578999999999987532 1110 111124456677778887752 23569999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCEEEE-cCCCCcchHHHHHHHH-----hcCc-----EEEEEeCCCCCC-----------CC
Q 040741 128 TESNNVSIKGVMHFYKDKKRHVIT-TQTEHKCVLDSCRHLQ-----QEGF-----EITYLPVGADGI-----------VN 185 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~~g~~vi~-~~~~h~~~~~~~~~~~-----~~G~-----~v~~v~~~~~~~-----------~d 185 (457)
|+|++.|++....+. + +.+|+. ....|.....+..... ..++ .+..++.+.... -+
T Consensus 104 seA~e~AlklAr~~t-g-r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (420)
T TIGR00700 104 AEAVENAVKIARSYT-G-RPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGE 181 (420)
T ss_pred HHHHHHHHHHHHHhc-C-CCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHH
Confidence 999999999876542 3 344554 4456666655543221 1111 122233221000 12
Q ss_pred HHHHHHhcC-----CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCC--cccCC--CCcccE
Q 040741 186 LDELRAAIR-----PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKI--PVDVE--KWNVSL 251 (457)
Q Consensus 186 ~~~le~~i~-----~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~--~~~~~--~~~~Di 251 (457)
++.+++.+. ++...|+++.+...+|.+.| +++|.++|++||+++|+|+++. ++.. ..... ...+|+
T Consensus 182 ~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi 261 (420)
T TIGR00700 182 LAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGPEPDL 261 (420)
T ss_pred HHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCCCCCE
Confidence 556776652 46789999999988998877 8999999999999999999986 3221 11111 224787
Q ss_pred EEeccccccC-CCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 040741 252 MSLSGHKIYG-PKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLL 330 (457)
Q Consensus 252 ~~~s~~K~~g-~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~ 330 (457)
++ ++|.++ .-.+|+++++++..+.+.+...+. . ...++..++++.++++.+.++ ...++.+++.++++
T Consensus 262 ~~--lsK~l~~G~pig~v~~~~~i~~~~~~~~~~~------T-~~~~pl~~aaa~a~l~~l~~~--~~~~~~~~~g~~l~ 330 (420)
T TIGR00700 262 IT--TAKSLADGLPLSGVTGRAEIMDAPAPGGLGG------T-YAGNPLACAAALAVLAIIESE--GLIERARQIGRLVT 330 (420)
T ss_pred EE--eeccccCCcceEEEEecHHHHhhcCCCCcCC------C-CCcCHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHH
Confidence 66 559544 234899999987666554322211 1 144566666677778776652 23344444444444
Q ss_pred HHHhh---cCCCeEEeCCCCCcccceEEEEEccc----c----chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCC
Q 040741 331 NGIKE---KLDGVVVNGSMERRYIGNLNLSFAYV----E----GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGV 397 (457)
Q Consensus 331 ~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~ 397 (457)
+.|++ .++.+..+. ..+.++.+.+... . ...+...+ +||.+.++..+
T Consensus 331 ~~L~~l~~~~~~~~~vr----g~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f---------------- 390 (420)
T TIGR00700 331 DRLTTLKAVDPRIGDVR----GLGAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMF---------------- 390 (420)
T ss_pred HHHHHHHhhCCCEEEee----ccceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCC----------------
Confidence 44433 144332221 1144444544211 1 12233323 68887664311
Q ss_pred CccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 398 DEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 398 ~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
.+.|||+++..++++++++++++|.++++
T Consensus 391 -----~~~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 391 -----GNIIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred -----CCEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 16899999888889999999999998874
No 323
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.80 E-value=4.7e-17 Score=162.85 Aligned_cols=334 Identities=16% Similarity=0.140 Sum_probs=202.9
Q ss_pred cCCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCC-CCCcEEEeCC
Q 040741 54 IAGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGA-SPKEIIFTSG 126 (457)
Q Consensus 54 ~~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~-~~~~i~~t~g 126 (457)
...+.-|+|+.+. +..+|++.+++.+.+.... .... +....+...++.+.|.++++. ..+.++|++|
T Consensus 36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~-~~~~-----~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~s 109 (421)
T PRK09792 36 DVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFT-HTAY-----QIVPYESYVTLAEKINALAPVSGQAKTAFFTT 109 (421)
T ss_pred eCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhcc-Cccc-----CccCCHHHHHHHHHHHHhCCCCCCceEEEeCC
Confidence 3455568887543 3678999999999987531 1111 111124556777778887753 2346999999
Q ss_pred hHHHHHHHHHHhhhhhcCCCCEEEEcC-CCCcchHHHHHHHH-----hcCc-----EEEEEeCCCC--CC---CCHHHHH
Q 040741 127 ATESNNVSIKGVMHFYKDKKRHVITTQ-TEHKCVLDSCRHLQ-----QEGF-----EITYLPVGAD--GI---VNLDELR 190 (457)
Q Consensus 127 ~T~a~~~al~~~~~~~~~~g~~vi~~~-~~h~~~~~~~~~~~-----~~G~-----~v~~v~~~~~--~~---~d~~~le 190 (457)
||+|++.|++....+ ..+.+|+... ..|.....+..... ..++ .+..++.+.+ +. -|+++++
T Consensus 110 GseA~e~AlklAr~~--tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~ 187 (421)
T PRK09792 110 GAEAVENAVKIARAH--TGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIE 187 (421)
T ss_pred hHHHHHHHHHHHHHh--cCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHH
Confidence 999999999987754 2344566555 45665555443221 1111 1333443311 11 1357788
Q ss_pred HhcC-----CCceEEEEecccccccccc-C---hHHHHHHHHhcCCcEEEehhhh-cCCC--cccCCC--CcccEEEecc
Q 040741 191 AAIR-----PDTGLISVMAVNNEIGVIQ-P---MEEIGQICKEFKIPFHTDAAQA-LGKI--PVDVEK--WNVSLMSLSG 256 (457)
Q Consensus 191 ~~i~-----~~t~li~i~~~~~~~G~~~-~---l~~i~~l~~~~~v~li~D~a~~-~g~~--~~~~~~--~~~Di~~~s~ 256 (457)
+.++ ++.+.|+++.+++++|... | +++|.++|++||+++|+|+++. +|.. .+.... ..+|++++
T Consensus 188 ~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pDi~t~-- 265 (421)
T PRK09792 188 RLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTM-- 265 (421)
T ss_pred HHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCcEEEe--
Confidence 8775 3568999999999999775 5 8999999999999999999986 3221 112221 24786555
Q ss_pred ccccC-CCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhh
Q 040741 257 HKIYG-PKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKE 335 (457)
Q Consensus 257 ~K~~g-~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~ 335 (457)
+|.+| .-.+|+++++++..+.+.+...+ .. ...++..+++..+.++.+.++ +..++.+++.+++.+.|+.
T Consensus 266 gK~l~~G~pigav~~~~~i~~~~~~~~~~------~T-~~gnpl~~aaa~a~l~~l~~~--~~~~~~~~~g~~l~~~l~~ 336 (421)
T PRK09792 266 AKSLAGGMPLSGVVGNANIMDAPAPGGLG------GT-YAGNPLAVAAAHAVLNIIDKE--SLCERANQLGQRLKNTLID 336 (421)
T ss_pred ehhhcCCCceEEEEEcHHHHhccCCCCcC------CC-CCCCHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHH
Confidence 59443 33489999988766655432211 11 245556666666778877653 4455555666666555544
Q ss_pred ---cCCCeEEeCCCCCcccceEEEEEcccc--------chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCC
Q 040741 336 ---KLDGVVVNGSMERRYIGNLNLSFAYVE--------GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMA 402 (457)
Q Consensus 336 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~ 402 (457)
.+|.+ .+ ....+.++.+.+...+ ...+...+ +|+.+.... ..
T Consensus 337 l~~~~p~v---~~-vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~g---------------------~~ 391 (421)
T PRK09792 337 AKESVPAI---AA-VRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCG---------------------AY 391 (421)
T ss_pred HHHhCCCc---ce-ecccceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEeecC---------------------CC
Confidence 13432 11 1122455555554221 12233333 576663110 11
Q ss_pred CCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 403 HTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 403 ~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
++.|||.++..++++||+++++++.++++
T Consensus 392 ~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 392 GNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred CCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 27999999998999999999999999874
No 324
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.80 E-value=4.6e-17 Score=162.44 Aligned_cols=341 Identities=13% Similarity=0.112 Sum_probs=207.1
Q ss_pred cCCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCh
Q 040741 54 IAGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGA 127 (457)
Q Consensus 54 ~~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~ 127 (457)
...+.-|||+.+. +...|++.+++.+.+++.... . ......+...++.++|.++++...+.++|+++|
T Consensus 36 D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~-~-----~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SG 109 (422)
T PRK05630 36 LEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHV-M-----FGGLTHEPAIKLTRKLLNLTDNGLDHVFYSDSG 109 (422)
T ss_pred ECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCc-c-----cCCcCCHHHHHHHHHHHhhCCCCcCEEEEeCCc
Confidence 3455678887543 357899999999998763211 0 000112456778888888875434579999999
Q ss_pred HHHHHHHHHHhhhhhcC----CCCEEEEcCC-CCcchHHHHHHHHhc-----C-----cEEEEEeCCCCCCCC-------
Q 040741 128 TESNNVSIKGVMHFYKD----KKRHVITTQT-EHKCVLDSCRHLQQE-----G-----FEITYLPVGADGIVN------- 185 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~----~g~~vi~~~~-~h~~~~~~~~~~~~~-----G-----~~v~~v~~~~~~~~d------- 185 (457)
|+|++.|++....+... .+.+|+.... .|.....+....... . ..+..+|.+.....+
T Consensus 110 seA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 189 (422)
T PRK05630 110 SVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEY 189 (422)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHH
Confidence 99999999987765421 2355665554 555444443221100 0 112333332111111
Q ss_pred HHHHHHhcCCCceEEEEecc-ccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCC--c--ccCCCCcccEEEec
Q 040741 186 LDELRAAIRPDTGLISVMAV-NNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKI--P--VDVEKWNVSLMSLS 255 (457)
Q Consensus 186 ~~~le~~i~~~t~li~i~~~-~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~--~--~~~~~~~~Di~~~s 255 (457)
.+.+++.+.++...|+++.+ ....|.+.| +++|.++|++||+++|+|+++. +|.. . .......+|+++++
T Consensus 190 ~~~~~~~~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~t~g 269 (422)
T PRK05630 190 LRSLELLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIMCVG 269 (422)
T ss_pred HHHHHHHHhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCeeeee
Confidence 34566667678889999985 777787755 8899999999999999999985 3321 1 11122357888665
Q ss_pred ccccc-CC-CCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 040741 256 GHKIY-GP-KGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGI 333 (457)
Q Consensus 256 ~~K~~-g~-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l 333 (457)
|.+ |. ..+|+++++++..+.+......+....+ .....++..+++..++++.++++ ...++.+++.+++++.|
T Consensus 270 --K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~-~T~~g~Pla~aaa~aaL~~l~~~--~~~~~~~~~g~~l~~~L 344 (422)
T PRK05630 270 --KALTGGFMSFAATLCTDKVAQLISTPNGGGALMHG-PTFMANPLACAVAHASLEIIETG--MWRKQVKRIEAELIAGL 344 (422)
T ss_pred --chhhcCccccceeeccHHHHHHHhccCCCCccccC-CCCcCCHHHHHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHH
Confidence 943 32 3368888887655444211000000000 11246677788788888888763 44567777778887777
Q ss_pred hhcCCCeEEeCCCCCcccceEEEEEccc-cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEec
Q 040741 334 KEKLDGVVVNGSMERRYIGNLNLSFAYV-EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGI 410 (457)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~ 410 (457)
+. +.....+++ ....+.++.+.+... ....+...+ +|+.+.+. .+.+||.+
T Consensus 345 ~~-l~~~~~v~~-vRg~Gl~~~ie~~~~~~~~~~~~~~~~~Gl~~~~~------------------------g~~l~~~P 398 (422)
T PRK05630 345 SP-LAHLPGVAD-VRVLGAIGVVEMEQPVDMEEATQAAVDHGVWLRPF------------------------GRLVYVMP 398 (422)
T ss_pred HH-hhcCCCeee-eeccccEEEEEECCcccHHHHHHHHHHCCeEEEec------------------------CCEEEEEC
Confidence 65 321111111 112245555555422 223444444 56665321 16899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHH
Q 040741 411 GRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 411 ~~~~t~edid~~~~~l~~~~~ 431 (457)
+..+|++|||+++++|+++++
T Consensus 399 pL~it~~~i~~~~~~l~~al~ 419 (422)
T PRK05630 399 PYITTSEQIAQICAALAAAVK 419 (422)
T ss_pred CccCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999986
No 325
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.80 E-value=1.8e-16 Score=158.59 Aligned_cols=333 Identities=15% Similarity=0.124 Sum_probs=204.9
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCC-CCCcEEEeCCh
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGA-SPKEIIFTSGA 127 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~-~~~~i~~t~g~ 127 (457)
..+.-|||+.+. +..+|++.+++.+.+.+.. .... .....+...++.++|.++++. ..+.++|+++|
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~-~~~~-----~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sG 110 (421)
T PRK06777 37 VEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFT-HTAY-----QIVPYASYVTLAERINALAPIDGPAKTAFFTTG 110 (421)
T ss_pred CCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcc-cccc-----cccCChHHHHHHHHHHHhCCCCCCceEEEeCCc
Confidence 345568887543 3678999999999987642 1110 111123456777788888753 23569999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCEEEEcC-CCCcchHHHHHHHHh-----cCc-----EEEEEeCCCC--C---CCCHHHHHH
Q 040741 128 TESNNVSIKGVMHFYKDKKRHVITTQ-TEHKCVLDSCRHLQQ-----EGF-----EITYLPVGAD--G---IVNLDELRA 191 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~~g~~vi~~~-~~h~~~~~~~~~~~~-----~G~-----~v~~v~~~~~--~---~~d~~~le~ 191 (457)
|+|++.|++....+ ..+.+|+... ..|.....+...... .++ .+..++.+.. + .-|++++++
T Consensus 111 seA~e~AlklAr~~--tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~ 188 (421)
T PRK06777 111 AEAVENAVKIARAY--TGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVER 188 (421)
T ss_pred HHHHHHHHHHHHHh--hCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHH
Confidence 99999999987654 2344565544 456665555432210 011 1122222211 1 123667787
Q ss_pred hcC-----CCceEEEEeccccccccc-cC---hHHHHHHHHhcCCcEEEehhhh-cCCC--cccCC--CCcccEEEeccc
Q 040741 192 AIR-----PDTGLISVMAVNNEIGVI-QP---MEEIGQICKEFKIPFHTDAAQA-LGKI--PVDVE--KWNVSLMSLSGH 257 (457)
Q Consensus 192 ~i~-----~~t~li~i~~~~~~~G~~-~~---l~~i~~l~~~~~v~li~D~a~~-~g~~--~~~~~--~~~~Di~~~s~~ 257 (457)
.+. ++...|+++.+.+..|.. .| +++|.++|++||+++|+|+++. +|.. .+... ...+|+++ ++
T Consensus 189 ~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDiv~--~s 266 (421)
T PRK06777 189 LFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDLIT--MA 266 (421)
T ss_pred HHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCCEEe--ee
Confidence 764 356889999998888865 44 8999999999999999999987 2211 11112 22478765 56
Q ss_pred cccC-CCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhc
Q 040741 258 KIYG-PKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEK 336 (457)
Q Consensus 258 K~~g-~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 336 (457)
|.+| .-.+|+++++++..+.+.+...+ .. ...++..+++..++++.+++ +.+.++.+++.+++++.|++.
T Consensus 267 K~l~~G~pigav~~~~~i~~~~~~~~~~------~T-~~~~p~~~aaa~a~L~~~~~--~~l~~~~~~~g~~l~~~L~~l 337 (421)
T PRK06777 267 KSLGGGMPISAVVGRAEVMDAPAPGGLG------GT-YAGNPLAVAAALAVLDVIAE--EKLCQRALILGAHLVEVLEKA 337 (421)
T ss_pred hhhcCCCceEEEEEcHHHHhccCCCCCC------CC-CCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHH
Confidence 9554 22389999987765555432211 11 24566777777788887765 567777788888888877661
Q ss_pred ---CCCeEEeCCCCCcccceEEEEEccc----cchHHHhc----c--cCeEecccCccCCCCCChhHHHHHcCCCccCCC
Q 040741 337 ---LDGVVVNGSMERRYIGNLNLSFAYV----EGESLLMG----L--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAH 403 (457)
Q Consensus 337 ---~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~----l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~ 403 (457)
.+.+..+. ..+.++.+.+... ....+... + +||.+.++... .
T Consensus 338 ~~~~~~i~~vr----g~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~---------------------g 392 (421)
T PRK06777 338 KASCPAIVDIR----ARGSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVH---------------------G 392 (421)
T ss_pred HHhCCCeEEec----CceEEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCC---------------------C
Confidence 23222221 1244444444321 11122222 2 67777654211 1
Q ss_pred CeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 404 TSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 404 ~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
+.+||.++...+++++|+++++|++++.
T Consensus 393 ~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 393 NVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 6899999988999999999999998864
No 326
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.80 E-value=9e-17 Score=162.13 Aligned_cols=343 Identities=14% Similarity=0.148 Sum_probs=209.2
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChH
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGAT 128 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T 128 (457)
..+.-|||+.+. +..+|++.+++.+.+....-.. ..+.. .+...++.+.|++++....+.++|++|||
T Consensus 53 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~-----~~~~~-~~~~~~lae~L~~~~p~~~~~v~f~~SGs 126 (460)
T PRK06916 53 VNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHST-----LLGLA-NVPSILLAEKLIEVVPEGLKKVFYSDSGA 126 (460)
T ss_pred CCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCcc-----ccccC-CHHHHHHHHHHHHhCCCCCCEEEEeCCcH
Confidence 345568887543 4678999999999987632110 01111 24556788888888764435799999999
Q ss_pred HHHHHHHHHhhhhhc----CCCCEEEEcCC-CCcchHHHHHHHHhcC---------cEEEEEeCCC------CC------
Q 040741 129 ESNNVSIKGVMHFYK----DKKRHVITTQT-EHKCVLDSCRHLQQEG---------FEITYLPVGA------DG------ 182 (457)
Q Consensus 129 ~a~~~al~~~~~~~~----~~g~~vi~~~~-~h~~~~~~~~~~~~~G---------~~v~~v~~~~------~~------ 182 (457)
+|++.|++....+.. ..+.+||.... .|.....+........ ..+..+|.+. ++
T Consensus 127 eAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~ 206 (460)
T PRK06916 127 TAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIV 206 (460)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHH
Confidence 999999998775432 22356665554 5555544443221110 1122333221 00
Q ss_pred CCCHHHHHHhcC---CCceEEEEec-cccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc--cc--CCCCcc
Q 040741 183 IVNLDELRAAIR---PDTGLISVMA-VNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP--VD--VEKWNV 249 (457)
Q Consensus 183 ~~d~~~le~~i~---~~t~li~i~~-~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~--~~--~~~~~~ 249 (457)
..|++++++.++ ++...|+++. +....|.+.| ++++.++|++||+++|+|+++. +|... +. .....+
T Consensus 207 ~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~P 286 (460)
T PRK06916 207 KKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTP 286 (460)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCC
Confidence 123567777775 5678889998 5777887765 8999999999999999999985 43221 11 122358
Q ss_pred cEEEecccc-ccCC-CCceEEEEecCCCccccccccC-CccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 040741 250 SLMSLSGHK-IYGP-KGVGALYMRRRPRIRVEPLING-GGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALH 326 (457)
Q Consensus 250 Di~~~s~~K-~~g~-~G~G~l~~~~~~~~~~~~~~~~-~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~ 326 (457)
|+++++ | +.|. ..+|+++++++..+.+.+.... .....+... +.++..+++..++++.+.+ +...++.+++.
T Consensus 287 Div~~g--K~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~-~gnpl~~aaa~a~l~~l~~--~~l~~~~~~~g 361 (460)
T PRK06916 287 DIMTAG--KGLTGGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSY-TGNPLGCAVALANLELYEK--TNLIEQVARKT 361 (460)
T ss_pred Ceeeee--hhhhcCccccceeeecHHHHHHhhccccccCccccCCCC-CCCHHHHHHHHHHHHHHHh--ccHHHHHHHHH
Confidence 998776 9 4443 2589999987755443221100 000001111 3366667777778887765 45667788888
Q ss_pred HHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcccc------------chHHHhcc--cCeEecccCccCCCCCChhHHH
Q 040741 327 DRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVE------------GESLLMGL--KEVAVSSGSACTSASLEPSYVL 392 (457)
Q Consensus 327 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l 392 (457)
+++++.|++ +....++++ ....+.++.+.+.... ...+...+ +|+.+.+.
T Consensus 362 ~~l~~~l~~-l~~~~~v~~-vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~-------------- 425 (460)
T PRK06916 362 EYVATQLED-LFALKHVGD-IRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPL-------------- 425 (460)
T ss_pred HHHHHHHHH-hhcCCCeEE-eecCCceeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEec--------------
Confidence 888888876 322211111 1122444444442110 01233333 56665421
Q ss_pred HHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 393 RALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 393 ~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
.+.+||.++..+|++|||+++++++++++++-
T Consensus 426 ----------g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 426 ----------GNTIVFMPPLASTIDELDEMLRILYKAISDVT 457 (460)
T ss_pred ----------CCEEEEeCCcccCHHHHHHHHHHHHHHHHhhc
Confidence 16899999999999999999999999998653
No 327
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.80 E-value=1.8e-16 Score=159.84 Aligned_cols=334 Identities=13% Similarity=0.131 Sum_probs=202.6
Q ss_pred CCcEEecCCCC-----CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHH
Q 040741 56 GRPLYLDMQAT-----TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATES 130 (457)
Q Consensus 56 ~~~i~l~~~~~-----~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a 130 (457)
.+.-|||+.+. +...|++.+++.+.+.... ...+ . ...+...++.+.|+++++...+.++|++||++|
T Consensus 70 dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~-~~~~---~---~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseA 142 (459)
T PRK06082 70 DGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLP-FSPR---R---FTNETAIECAEKLTEIAGGELNRVLFAPGGTSA 142 (459)
T ss_pred CCCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCC-CccC---c---cCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHH
Confidence 44568887643 3478999999999987532 1110 1 112567788899999986444579999999999
Q ss_pred HHHHHHHhhhhhcCCCCEEE-EcCCCCcchHHHHHHHHhc----Cc-----EEEEEeCCCC-----CCC------CHHHH
Q 040741 131 NNVSIKGVMHFYKDKKRHVI-TTQTEHKCVLDSCRHLQQE----GF-----EITYLPVGAD-----GIV------NLDEL 189 (457)
Q Consensus 131 ~~~al~~~~~~~~~~g~~vi-~~~~~h~~~~~~~~~~~~~----G~-----~v~~v~~~~~-----~~~------d~~~l 189 (457)
++.|++....+ ..+.+|+ .....|.....++...... ++ .+..++.... ... +++++
T Consensus 143 ve~AlklAr~~--tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 220 (459)
T PRK06082 143 IGMALKLARHI--TGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYL 220 (459)
T ss_pred HHHHHHHHHHh--cCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHH
Confidence 99999977654 2334554 4555677665555433110 00 1223332110 001 13557
Q ss_pred HHhcC--CCceEEEEeccccccccccC---hHHHHHHHHhcCCcEEEehhhhc-CCCc--c--cCCCCcccEEEeccccc
Q 040741 190 RAAIR--PDTGLISVMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQAL-GKIP--V--DVEKWNVSLMSLSGHKI 259 (457)
Q Consensus 190 e~~i~--~~t~li~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~-g~~~--~--~~~~~~~Di~~~s~~K~ 259 (457)
++.++ ++...|+++.+.+..+.+.| +++|.++|++||+++|+|++++. |... + ......+|+++++ |.
T Consensus 221 ~~~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv~~g--Kg 298 (459)
T PRK06082 221 EYVIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDILCIG--KG 298 (459)
T ss_pred HHHHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCCEEEec--cc
Confidence 77775 35788899998876333444 89999999999999999999863 3221 1 1112248988855 94
Q ss_pred c-CC-CCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcC
Q 040741 260 Y-GP-KGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKL 337 (457)
Q Consensus 260 ~-g~-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 337 (457)
+ |. ..+|+++++++...... .. .. ......++..+++..++++.+++ +...++.+++.+++++.|++..
T Consensus 299 l~gG~~P~~av~~~~~i~~~~~----~~-~~--~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~ 369 (459)
T PRK06082 299 LGGGLVPIAAMITKDKYNTAAQ----IS-LG--HYTHEKSPLGCAAALATIEVIEQ--EGLLEKVKADSQFMRERLLEMK 369 (459)
T ss_pred ccCCCCcceEEEEcHHHHhhcc----CC-CC--CCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHH
Confidence 4 32 24899998876432211 10 00 11224566667777778888765 3567777777788877776611
Q ss_pred CCeEEeCCCCCcccceEEEEEcccc---------chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeE
Q 040741 338 DGVVVNGSMERRYIGNLNLSFAYVE---------GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSI 406 (457)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~i 406 (457)
....++++ ....+.++.+.+.... ...+...+ +|+.+.+. ..+.|
T Consensus 370 ~~~~~i~~-vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~-----------------------~~~~i 425 (459)
T PRK06082 370 AKYPLIGD-VRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVS-----------------------QGNVI 425 (459)
T ss_pred hhCCCeee-eeeccceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEec-----------------------CCCEE
Confidence 11111221 1122445555553110 01122222 45554321 12789
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 407 RFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 407 Ri~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
||++...+|++|||+++++++++++++
T Consensus 426 ~~~Ppl~it~~eid~~~~~l~~~l~~~ 452 (459)
T PRK06082 426 QLSPPLIITREELTQALAILEEAIAKI 452 (459)
T ss_pred EEeCCCccCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999876
No 328
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.80 E-value=1.4e-16 Score=160.81 Aligned_cols=341 Identities=11% Similarity=0.096 Sum_probs=207.8
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhcc-CCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCh
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRY-GNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGA 127 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~ 127 (457)
..+.-|+|+.+. +..+|++.+++.+.+.... .... ++. .+...++.++|++++....+.++|+++|
T Consensus 44 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~------~~~-~~~~~~lae~L~~~~p~~~~~v~f~~sG 116 (466)
T PRK07030 44 FEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILA------GFS-HEPVIELSERLVKITPPGLSRCFYADNG 116 (466)
T ss_pred CCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCcccc------ccC-CHHHHHHHHHHHHhCCCCcCEEEEeCCc
Confidence 345568887543 3578999999999987531 1110 111 2556778888888875434579999999
Q ss_pred HHHHHHHHHHhhhhh---cC-CCCEEEEcCC-CCcchHHHHHHHHhc----Cc-----EEEEEeCCCC-----C------
Q 040741 128 TESNNVSIKGVMHFY---KD-KKRHVITTQT-EHKCVLDSCRHLQQE----GF-----EITYLPVGAD-----G------ 182 (457)
Q Consensus 128 T~a~~~al~~~~~~~---~~-~g~~vi~~~~-~h~~~~~~~~~~~~~----G~-----~v~~v~~~~~-----~------ 182 (457)
++|++.|++....++ +. .+.+||.... .|.....+....... ++ .+..+|.+.. +
T Consensus 117 sEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~ 196 (466)
T PRK07030 117 SSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEH 196 (466)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHH
Confidence 999999999876542 11 2345665554 555554444322110 00 1222332211 0
Q ss_pred -CCCHHHHHHhcC---CCceEEEEec-cccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc--c--cCCCCc
Q 040741 183 -IVNLDELRAAIR---PDTGLISVMA-VNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP--V--DVEKWN 248 (457)
Q Consensus 183 -~~d~~~le~~i~---~~t~li~i~~-~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~--~--~~~~~~ 248 (457)
.-+++++++.+. ++...|+++. ++...|.+.| +++|.++|++||+++|+|+++. +|... + ......
T Consensus 197 ~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~ 276 (466)
T PRK07030 197 SRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIR 276 (466)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCC
Confidence 113566777774 4678888998 5777788765 8899999999999999999985 44321 1 112235
Q ss_pred ccEEEecccc-ccCC-CCceEEEEecCCCcccccccc-CCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 040741 249 VSLMSLSGHK-IYGP-KGVGALYMRRRPRIRVEPLIN-GGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITAL 325 (457)
Q Consensus 249 ~Di~~~s~~K-~~g~-~G~G~l~~~~~~~~~~~~~~~-~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~ 325 (457)
+|+++++ | +.|. ..+|+++++++..+.+..... .+....+.. ...++..+++..++++.+++ +...++.+++
T Consensus 277 PDiv~~g--Kgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T-~~gnpla~aaa~a~L~~i~~--~~l~~~~~~~ 351 (466)
T PRK07030 277 PDFLCLS--KALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHS-YTGNPLACAAALATLDIFEQ--DNVIENNRAL 351 (466)
T ss_pred CCEEeee--hhccCCcccceEEEecHHHHHHHhcccccccccccCCC-CCCCHHHHHHHHHHHHHHHh--cCHHHHHHHH
Confidence 8999887 9 4443 248999998775544321100 000000011 13466777777788888876 4566777888
Q ss_pred HHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcccc--------c----hHHHhcc--cCeEecccCccCCCCCChhHH
Q 040741 326 HDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVE--------G----ESLLMGL--KEVAVSSGSACTSASLEPSYV 391 (457)
Q Consensus 326 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~----~~~~~~l--~~i~~~~g~~~~~~~~~~~~~ 391 (457)
.+++++.|++ +.....+++ ....+.++.+.+.... . ..+...+ +|+.+.+.
T Consensus 352 G~~l~~~L~~-l~~~~~v~~-vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~------------- 416 (466)
T PRK07030 352 ARRMAEATAH-LADHPHVAE-VRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPL------------- 416 (466)
T ss_pred HHHHHHHHHH-HhcCCCEEE-eEeceeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEec-------------
Confidence 8888887766 322111111 1122444444442110 0 1222222 46555321
Q ss_pred HHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 392 LRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 392 l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
.+.+||.++..+|++|||.++++++++++++
T Consensus 417 -----------g~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 417 -----------GSVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred -----------CCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 1689999999999999999999999999987
No 329
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.80 E-value=8.8e-17 Score=169.74 Aligned_cols=292 Identities=13% Similarity=0.103 Sum_probs=216.5
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHH-HHHhcCcEEE
Q 040741 96 GWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCR-HLQQEGFEIT 174 (457)
Q Consensus 96 ~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~G~~v~ 174 (457)
..+..+..-+++.++++++|.+..++.+..++|.+.++++++... .++++++|++++..||.....++ +++..|++++
T Consensus 104 sQG~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~-~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~ 182 (939)
T TIGR00461 104 SQGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNV-SKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVI 182 (939)
T ss_pred hhHHHHHHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHh-hcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEE
Confidence 445568888999999999999988899999999998887776542 11345899999999999998877 5677799998
Q ss_pred EEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEe
Q 040741 175 YLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSL 254 (457)
Q Consensus 175 ~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~ 254 (457)
.++ +++|++.+ ++..+++..+ |..|.+.++++|.+++|++|.+++++.-.........+.++|+|++++
T Consensus 183 ~~~--------~~~l~~~~--~~~~v~~q~P-n~~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pge~GaDi~vg 251 (939)
T TIGR00461 183 VVD--------CSDIKKAV--DVFGCLLQYP-ATDGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPGHYGADIVLG 251 (939)
T ss_pred EEc--------HHHHhhcC--CEEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHHHcCCcEEee
Confidence 874 45676666 5666666666 458999999999999999999999987777666667778899999988
Q ss_pred ccccc-----cCCCCceEEEEecCCCccccccccCC-----------------ccccccccCCCChhHHHHHHH---HH-
Q 040741 255 SGHKI-----YGPKGVGALYMRRRPRIRVEPLINGG-----------------GQERGIRSGTLPTPLIVGFGS---AC- 308 (457)
Q Consensus 255 s~~K~-----~g~~G~G~l~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~t~~~~~~~al~~---al- 308 (457)
+.+++ ||.++.|++.+++++...+...+.|. .++.+...++.|+....++.+ ++
T Consensus 252 ~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y 331 (939)
T TIGR00461 252 SSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSY 331 (939)
T ss_pred CCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHH
Confidence 88875 45566899999988766655443331 112233456766654444433 32
Q ss_pred -H-HHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHHhcc--cCeEecccCccCCC
Q 040741 309 -E-IAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSA 384 (457)
Q Consensus 309 -~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~ 384 (457)
. +..+++.++.++...++.++.+.|.+ .|+++..+ .+...+.+.+...+.+++...+ +||.++..
T Consensus 332 ~~~~G~~GL~~iA~~~~~~a~~l~~~L~~--~G~~~~~~---~fF~~~~v~~~~~~~~~i~~~~~~~gi~l~~~------ 400 (939)
T TIGR00461 332 CVYHGPKGLKNIARRIHSLTSILANGLEN--DPHELINK---TWFDTLTVKVGNGISSELLKAAEEFNINLRAV------ 400 (939)
T ss_pred HHHHCHHHHHHHHHHHHHHHHHHHHHHHh--CCCcccCC---CccceEEEEeCCCCHHHHHHHHHHCCCeeeec------
Confidence 2 22356899999999999999999998 68888654 3344455555433456666666 57665421
Q ss_pred CCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHH
Q 040741 385 SLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTV 427 (457)
Q Consensus 385 ~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~ 427 (457)
..+.+++++...+|++||+.+++.+.
T Consensus 401 -----------------~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 401 -----------------DTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred -----------------CCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 12689999999999999999999995
No 330
>PRK07480 putative aminotransferase; Validated
Probab=99.80 E-value=6.4e-17 Score=162.87 Aligned_cols=343 Identities=16% Similarity=0.117 Sum_probs=204.2
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChH
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGAT 128 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T 128 (457)
..+.-|+|+.+. +...|++.+++.+.+....-.. . .++. ..+...++.++|+++++...+.++|++|||
T Consensus 47 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~---~-~~~~-~~~~~~~lae~L~~~~p~~~~~v~f~~SGs 121 (456)
T PRK07480 47 SEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYN---T-FFKT-THPPAIELAAKLAEVAPPGFNHVFFTNSGS 121 (456)
T ss_pred CCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcc---c-cccc-CCHHHHHHHHHHHHhCCCCcCEEEEeCCcH
Confidence 445568887543 3678999999999987532110 0 0011 125677788888888864445799999999
Q ss_pred HHHHHHHHHhhhhhc---CC-CCEEEEcC-CCCcchHHHHHHHH------hcCc---EEEEEeCCCCC----CCC-----
Q 040741 129 ESNNVSIKGVMHFYK---DK-KRHVITTQ-TEHKCVLDSCRHLQ------QEGF---EITYLPVGADG----IVN----- 185 (457)
Q Consensus 129 ~a~~~al~~~~~~~~---~~-g~~vi~~~-~~h~~~~~~~~~~~------~~G~---~v~~v~~~~~~----~~d----- 185 (457)
+|++.|++....+.. .+ +.+||... ..|.....+..... ..|. .+..++.+... ..+
T Consensus 122 eA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 201 (456)
T PRK07480 122 EANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFG 201 (456)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHH
Confidence 999999998776532 12 34566544 45655544433210 0010 11222211100 001
Q ss_pred ---HHHHHHhcC----CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc--ccC--CCCcc
Q 040741 186 ---LDELRAAIR----PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP--VDV--EKWNV 249 (457)
Q Consensus 186 ---~~~le~~i~----~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~--~~~--~~~~~ 249 (457)
++.+++.+. ++...|+++.++...|.+.| +++|.++|++||+++|+|+++. +|... +.. ....+
T Consensus 202 ~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~P 281 (456)
T PRK07480 202 LAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKP 281 (456)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCC
Confidence 356665552 46789999999888888877 8999999999999999999985 54321 111 22347
Q ss_pred cEEEecccc-ccCC-CCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHH-HHHH
Q 040741 250 SLMSLSGHK-IYGP-KGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRI-TALH 326 (457)
Q Consensus 250 Di~~~s~~K-~~g~-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~-~~~~ 326 (457)
|+++++ | +.|. ..+|+++++++..+.+... .+ ....+. ..+.++..+++..++++.+++ +...++. +++.
T Consensus 282 Div~~g--K~l~gG~~Pi~av~~~~~i~~~~~~~-~~-~~~~~~-T~~gnpl~~Aaa~a~L~~l~~--~~l~~~~~~~~g 354 (456)
T PRK07480 282 DLMTIA--KGLTSGYIPMGAVGVGDRVAEVLIEE-GG-EFNHGF-TYSGHPVAAAVALANLRILRD--EGIVERVRDDTG 354 (456)
T ss_pred Ceeeee--hhhccCCccceEEEEcHHHHHHHhcC-CC-CcccCC-CCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHH
Confidence 888776 9 4332 2479999887654443100 00 000011 124567777777788888876 3455556 3666
Q ss_pred HHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccc------------hHHHhcc--cCeEecccCccCCCCCChhHHH
Q 040741 327 DRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEG------------ESLLMGL--KEVAVSSGSACTSASLEPSYVL 392 (457)
Q Consensus 327 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l 392 (457)
+++.+.|++ +....++++ ....+.++.+.+..... ..+...+ +|+.+.+.
T Consensus 355 ~~l~~~l~~-l~~~~~i~~-vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~-------------- 418 (456)
T PRK07480 355 PYLQKRLRE-LADHPLVGE-VRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAV-------------- 418 (456)
T ss_pred HHHHHHHHH-hhcCCCeee-EEeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeec--------------
Confidence 666666655 322111111 11224444555521100 1122222 46555321
Q ss_pred HHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHh
Q 040741 393 RALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLRE 435 (457)
Q Consensus 393 ~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~ 435 (457)
.+.+||.++..+|++|||++++++++++++++.
T Consensus 419 ----------~~~l~~~Ppl~it~~eid~~~~~l~~al~~~~~ 451 (456)
T PRK07480 419 ----------GDRMIISPPLVITHAEIDELVEKARKALDATAA 451 (456)
T ss_pred ----------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 167999999999999999999999999988743
No 331
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.79 E-value=1.3e-16 Score=160.83 Aligned_cols=342 Identities=11% Similarity=0.073 Sum_probs=202.8
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCC-----CCCcEEE
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGA-----SPKEIIF 123 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~-----~~~~i~~ 123 (457)
..+.-|||+.+. +...|++.+++.+.+....-. .. .+.. .+...++.+.|.+++.. +.+.++|
T Consensus 61 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~-~~----~~~~-~~~~~~lae~L~~~~p~~~~~~~~~~v~f 134 (472)
T PRK08742 61 HDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQV-ML----AGFT-HEPAVQLAEQLLAIAPRQDGRAPLSKVFY 134 (472)
T ss_pred CCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCc-cc----cccC-CHHHHHHHHHHHHhCCCcccCCCCCEEEE
Confidence 345568887543 367899999999988653110 00 0111 14556777888887753 2346999
Q ss_pred eCChHHHHHHHHHHhhhhhcC----CCCEEEEcCC-CCcchHHHHHHHHhc----Cc-----EEEEEeCCCCC-------
Q 040741 124 TSGATESNNVSIKGVMHFYKD----KKRHVITTQT-EHKCVLDSCRHLQQE----GF-----EITYLPVGADG------- 182 (457)
Q Consensus 124 t~g~T~a~~~al~~~~~~~~~----~g~~vi~~~~-~h~~~~~~~~~~~~~----G~-----~v~~v~~~~~~------- 182 (457)
+++||+|++.|++....++.. .+.+||.... .|.....+....... ++ .+..++.+...
T Consensus 135 ~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~ 214 (472)
T PRK08742 135 ADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQS 214 (472)
T ss_pred eCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCC
Confidence 999999999999988766421 2356666555 455544443321100 00 12233322110
Q ss_pred -----CCCHHHHHHhcC---CCceEEEEec-cccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc--c--cC
Q 040741 183 -----IVNLDELRAAIR---PDTGLISVMA-VNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP--V--DV 244 (457)
Q Consensus 183 -----~~d~~~le~~i~---~~t~li~i~~-~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~--~--~~ 244 (457)
..+++.+++.+. ++...|+++. +....|.+.| ++++.++|++||+++|+|+++. +|... + ..
T Consensus 215 ~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~ 294 (472)
T PRK08742 215 AEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQ 294 (472)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHh
Confidence 013566777774 4678888888 5777787765 8999999999999999999986 44321 1 11
Q ss_pred CCCcccEEEecccc-ccCC-CCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHH
Q 040741 245 EKWNVSLMSLSGHK-IYGP-KGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRI 322 (457)
Q Consensus 245 ~~~~~Di~~~s~~K-~~g~-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~ 322 (457)
....+|+++++ | +.|. ..+|+++++++..+.+......+....+.. ...++..+++..++++.+++ +...++.
T Consensus 295 ~gv~PDiv~~g--Kgl~gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T-~~gnpl~~Aaa~a~L~~i~~--~~l~~~~ 369 (472)
T PRK08742 295 AGVMPDLLCLS--KGLTGGFLPLSAVLATQQLYDAFLDDSRERAFLHSHS-YTGNPLACAAALATLDIFAD--DDVIARN 369 (472)
T ss_pred cCCCCCEEEEc--ccccCCCCCcceeeccHHHHHHhhccCccCccCcCCC-CCccHHHHHHHHHHHHHHHH--CCHHHHH
Confidence 22358999887 9 4333 248999998775444322110000000111 13466677777788888876 3445555
Q ss_pred HHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcccc--------c----hHHHhcc--cCeEecccCccCCCCCCh
Q 040741 323 TALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVE--------G----ESLLMGL--KEVAVSSGSACTSASLEP 388 (457)
Q Consensus 323 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~----~~~~~~l--~~i~~~~g~~~~~~~~~~ 388 (457)
+++.+++++.++. +....++++ ....+.++.+.+.... . ..+...+ +|+.+.+.
T Consensus 370 ~~~g~~l~~~~~~-~~~~~~i~d-vRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~---------- 437 (472)
T PRK08742 370 QPTAARMTQLAAQ-IGEHPHVAD-VRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPL---------- 437 (472)
T ss_pred HHHHHHHHHHHHH-HhcCCCeee-EeccceEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEec----------
Confidence 5666666554443 221111221 1222444555553110 0 1122222 56665421
Q ss_pred hHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 389 SYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 389 ~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
.+.|||.++..+|++|||+++++|+++++++
T Consensus 438 --------------g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 438 --------------GDVLYWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred --------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 1689999999999999999999999999875
No 332
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.79 E-value=3.6e-16 Score=157.05 Aligned_cols=333 Identities=17% Similarity=0.177 Sum_probs=202.1
Q ss_pred CCCcEEecCCCCC------CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCCh
Q 040741 55 AGRPLYLDMQATT------PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGAS-PKEIIFTSGA 127 (457)
Q Consensus 55 ~~~~i~l~~~~~~------~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~i~~t~g~ 127 (457)
..+.-|+|+.+.. .-.|++.+++.+.+.... .... . .+ ..+...++.++|.+.++.+ .+.++|+++|
T Consensus 51 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~-~~~~-~---~~-~~~~~~~lAe~L~~~~p~~~~~~v~f~~SG 124 (441)
T PRK05769 51 VDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFL-HYSL-T---DF-YYEPAVELAERLVEIAPGGFEKKVFFTNSG 124 (441)
T ss_pred CCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhcc-CccC-c---cc-CCHHHHHHHHHHHHhCCCCCCCEEEECCch
Confidence 3455688875542 467999999999987531 1000 0 01 1245667888888887532 3569999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCEEEEcCC-CCcchHHHHHHHHh-----cC-----cEEEEEeCCCCCC-------------
Q 040741 128 TESNNVSIKGVMHFYKDKKRHVITTQT-EHKCVLDSCRHLQQ-----EG-----FEITYLPVGADGI------------- 183 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~~g~~vi~~~~-~h~~~~~~~~~~~~-----~G-----~~v~~v~~~~~~~------------- 183 (457)
|+|++.|++....+ ..+++|+.... .|.....+...... .+ ..+..++.+....
T Consensus 125 sEA~e~AlklAr~~--tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (441)
T PRK05769 125 TESNEAAIKIARYH--TGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGN 202 (441)
T ss_pred HHHHHHHHHHHHHH--hCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHH
Confidence 99999999987754 33456665544 55555544432110 00 1233333321100
Q ss_pred CCHHHHHH-hc-----CCCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc--ccCCC--Cc
Q 040741 184 VNLDELRA-AI-----RPDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP--VDVEK--WN 248 (457)
Q Consensus 184 ~d~~~le~-~i-----~~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~--~~~~~--~~ 248 (457)
-+++.+++ .+ .++...|+++.+....|.+.| +++|.++|++||+++|+|++++ +|... +.... ..
T Consensus 203 ~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~ 282 (441)
T PRK05769 203 AVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVE 282 (441)
T ss_pred HHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCC
Confidence 01344665 22 245788999999998999988 9999999999999999999987 33221 11122 24
Q ss_pred ccEEEeccccccC-CCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 040741 249 VSLMSLSGHKIYG-PKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHD 327 (457)
Q Consensus 249 ~Di~~~s~~K~~g-~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~ 327 (457)
+|+++++ |.+| ..++|+++++++..... ....+ ... ..++..+++..++++.+++ ...++.+++.+
T Consensus 283 pDivt~~--K~l~~G~p~gav~~~~~i~~~~-~~~~~------~T~-~g~p~~~aaa~a~L~~l~~---~~~~~~~~~g~ 349 (441)
T PRK05769 283 PDIITLA--KAIAGGLPLGAVIGRAELMFLP-PGSHA------NTF-GGNPVAAAAALATLEELEE---GLLENAQKLGE 349 (441)
T ss_pred CCEEEEc--ccccCCcccEEEEEehhhhhcC-CCCCC------CCC-CcCHHHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 6888655 9443 33479999887654322 11111 111 2355666667777877764 66778888888
Q ss_pred HHHHHHhhcCC-CeEEeCCCCCcccceEEEEEcccc-------chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCC
Q 040741 328 RLLNGIKEKLD-GVVVNGSMERRYIGNLNLSFAYVE-------GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGV 397 (457)
Q Consensus 328 ~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~ 397 (457)
++++.|++ +. ...++++ ....+.++.+.+.... ...+...+ +|+.+.+.
T Consensus 350 ~l~~~L~~-l~~~~~~~~~-vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~~------------------- 408 (441)
T PRK05769 350 YLRKELKE-LKEKYEFIGD-VRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLGA------------------- 408 (441)
T ss_pred HHHHHHHH-HHHhCCCeee-eecceEEEEEEeccCCccccHHHHHHHHHHHHhCCcEEecC-------------------
Confidence 88888765 21 1112211 1122444445553210 11222222 46655321
Q ss_pred CccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 398 DEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 398 ~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
+...+||+++..+|++|||+++++++++++++
T Consensus 409 ----~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 409 ----GKSAIRIIPPLIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred ----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 12689999999999999999999999998753
No 333
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.79 E-value=4.2e-17 Score=153.53 Aligned_cols=303 Identities=16% Similarity=0.135 Sum_probs=201.3
Q ss_pred HHHHHHHHHHHHHhC----CCC--C-cEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEE
Q 040741 101 VAVETARSQIADLIG----ASP--K-EIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEI 173 (457)
Q Consensus 101 ~~~~~~~~~la~~~g----~~~--~-~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v 173 (457)
....++...+.+..+ .++ + ++++|+|.|.++..+++.++ +++++|++...+|++...+.+.+ |.++
T Consensus 100 ~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~----N~gd~vlie~~ty~~AL~s~~a~---gv~~ 172 (472)
T KOG0634|consen 100 SGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLI----NRGDHVLIEEYTYPSALQSMEAL---GVKI 172 (472)
T ss_pred cCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhh----cCCCceEEecccchHHHHhcccc---CceE
Confidence 345566666666655 222 1 49999999999999999999 99999999999999988887777 9888
Q ss_pred EEEeCCCCCCCCHHHHHHhcCC---------Cc-eEEEEeccccccccccChH---HHHHHHHhcCCcEEEehhhhcCCC
Q 040741 174 TYLPVGADGIVNLDELRAAIRP---------DT-GLISVMAVNNEIGVIQPME---EIGQICKEFKIPFHTDAAQALGKI 240 (457)
Q Consensus 174 ~~v~~~~~~~~d~~~le~~i~~---------~t-~li~i~~~~~~~G~~~~l~---~i~~l~~~~~v~li~D~a~~~g~~ 240 (457)
+.|+.+.+| ++++.|++.++. ++ .+.+|+..+||||..++++ +|.+||++|+.+|++|+.+.+-..
T Consensus 173 ipv~md~~G-i~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~ 251 (472)
T KOG0634|consen 173 IPVKMDQDG-IDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQM 251 (472)
T ss_pred EeccccCCC-CCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeec
Confidence 888887776 689999988752 23 4778999999999999864 699999999999999999864211
Q ss_pred c--------------------------ccCCCCcccEEEeccccccCCC-CceEEEEecCCCccccccccCCcccccccc
Q 040741 241 P--------------------------VDVEKWNVSLMSLSGHKIYGPK-GVGALYMRRRPRIRVEPLINGGGQERGIRS 293 (457)
Q Consensus 241 ~--------------------------~~~~~~~~Di~~~s~~K~~g~~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (457)
. .+.+..|.-+-.-||+|+++|. .+||+.+.+..++++-... +.. ..
T Consensus 252 ~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~~l~ril~~a---e~~---t~ 325 (472)
T KOG0634|consen 252 NTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSLFLKRILDLA---EVA---TS 325 (472)
T ss_pred cccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHHHHHHHhhhc---cee---ec
Confidence 1 1112223345677999988765 4999999886555543222 111 01
Q ss_pred CCCChhHHHHHHHHHHHH-----HHhhHHHHHHHHHHHHHHHHHHhhcCCCe-EEeCCCCCcccceEEEEEcc-------
Q 040741 294 GTLPTPLIVGFGSACEIA-----KKEMDYDHKRITALHDRLLNGIKEKLDGV-VVNGSMERRYIGNLNLSFAY------- 360 (457)
Q Consensus 294 ~t~~~~~~~al~~al~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~------- 360 (457)
.|+.....-+.+.++.. ...+.+++..+...+.++..++.+.+|.- -.+.++.. +.++.+.++.
T Consensus 326 -~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~a--GmFiwv~i~~~~~~~~~ 402 (472)
T KOG0634|consen 326 -GPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKA--GMFIWVEIPYINFDTKK 402 (472)
T ss_pred -CcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCc--ceEEEEEeccccccccc
Confidence 12221122222223222 23467777788888889999998877765 22222322 3333344431
Q ss_pred -cc-chHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccC-CCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 361 -VE-GESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDM-AHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 361 -~~-~~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~-~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
.+ .++.+... .||.+.+|..+..- +... ..-++|++++.. +.|++++.++++..++++.-
T Consensus 403 ~i~q~~e~i~~~~vk~gV~~v~G~~F~v~-------------p~~s~~kiffRls~a~a-~~e~l~~g~~rf~~~ike~f 468 (472)
T KOG0634|consen 403 SINQIEEIIFIKAVKNGVKLVCGSWFMVD-------------PESSWSKIFFRLSIAFA-EPEKLDEGIERFGSVIKEHF 468 (472)
T ss_pred chHHHHHHHHHHHHHCCeEEecCceeEEc-------------CccCCCcceEEEEeecC-CHHHHHHHHHHHHHHHHHHh
Confidence 11 11222221 69999999765421 0111 224999999875 47899999999999988753
No 334
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.79 E-value=3.3e-17 Score=168.88 Aligned_cols=324 Identities=16% Similarity=0.108 Sum_probs=211.4
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHH-HHHHHhcCcEEEEEeCC
Q 040741 101 VAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDS-CRHLQQEGFEITYLPVG 179 (457)
Q Consensus 101 ~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~-~~~~~~~G~~v~~v~~~ 179 (457)
....++++..|+.+|++. ..++++|+|.+|.+++.+++ .+||.||+++.+|.|+..+ +... |+.++|++..
T Consensus 174 G~i~eAq~~AA~~fgAd~-tyFlvNGTS~gn~a~i~a~~----~~Gd~VLvdRN~HKSv~hgaLiLs---Ga~PVYl~P~ 245 (720)
T PRK13578 174 GAAKDAQKHAAKVFNADK-TYFVLNGTSASNKVVTNALL----TPGDLVLFDRNNHKSNHHGALIQA---GATPVYLETA 245 (720)
T ss_pred hHHHHHHHHHHHHhCCCc-eEEEeCChhHHHHHHHHHhc----CCCCEEEeecccHHHHHHHHHHHc---CCeEEEeecc
Confidence 467889999999999864 48888889999999999999 8999999999999999986 5555 9999999865
Q ss_pred CC-----CCCCHHH-----HHHhcCCC----------ceEEEEeccccccccccChHHHHHH-HHhcCCcEEEehhhhcC
Q 040741 180 AD-----GIVNLDE-----LRAAIRPD----------TGLISVMAVNNEIGVIQPMEEIGQI-CKEFKIPFHTDAAQALG 238 (457)
Q Consensus 180 ~~-----~~~d~~~-----le~~i~~~----------t~li~i~~~~~~~G~~~~l~~i~~l-~~~~~v~li~D~a~~~g 238 (457)
.+ |.++.++ ++++|... .++++++++. ..|.++++++|+++ |+.++ +|++|+||+.-
T Consensus 246 ~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pT-YdG~~ydi~~I~~~~~h~~~-~llvDEAhgah 323 (720)
T PRK13578 246 RNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGT-YDGTIYNARQVVDKIGHLCD-YILFDSAWVGY 323 (720)
T ss_pred ccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCC-CcceeecHHHHHHHhhccCC-cEEEeCcchhh
Confidence 32 3456444 88888644 4778888774 48999999999998 78888 99999999742
Q ss_pred --CCcc------cCCCCccc----EEEecccc-ccCCCCceEEEEecCCCc---------cccccccCCccccccccCCC
Q 040741 239 --KIPV------DVEKWNVS----LMSLSGHK-IYGPKGVGALYMRRRPRI---------RVEPLINGGGQERGIRSGTL 296 (457)
Q Consensus 239 --~~~~------~~~~~~~D----i~~~s~~K-~~g~~G~G~l~~~~~~~~---------~~~~~~~~~~~~~~~~~~t~ 296 (457)
..+. ..-..++| +++-|.|| +.+....+++-+++..++ ++...+. -+.+.+|
T Consensus 324 ~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~al~------m~qSTSP 397 (720)
T PRK13578 324 EQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNNAFM------LHASTSP 397 (720)
T ss_pred hccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHHHHH------HHcCCCh
Confidence 1121 11234778 99999999 455555677777654322 1211111 1235578
Q ss_pred ChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHH-hhcCCCeEEeCCCCCcc--------------cceEE-----
Q 040741 297 PTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGI-KEKLDGVVVNGSMERRY--------------IGNLN----- 355 (457)
Q Consensus 297 ~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l-~~~~~~~~~~~~~~~~~--------------~~~~~----- 355 (457)
+.+.++++..|...+.. .-+++.++..+.+..+++.| .. .+++.+..++.-.. .....
T Consensus 398 sY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~-~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~~~p~~ 476 (720)
T PRK13578 398 FYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILAR-CKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGE 476 (720)
T ss_pred HHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHh-CCCeeecccccccccccccCchhhhcccccccccccCc
Confidence 88889988887777765 46788888888888899888 55 77887774321000 00000
Q ss_pred --EEEccccc-hHHHhcccCeEecccCccCCCCCC----h----hHHHHHcCCCccC-CCCeEEEecCCCCCHHHHHHHH
Q 040741 356 --LSFAYVEG-ESLLMGLKEVAVSSGSACTSASLE----P----SYVLRALGVDEDM-AHTSIRFGIGRFTTEAEVDRAI 423 (457)
Q Consensus 356 --~~~~~~~~-~~~~~~l~~i~~~~g~~~~~~~~~----~----~~~l~~~g~~~~~-~~~~iRi~~~~~~t~edid~~~ 423 (457)
..|.+... .-.++-++=....+|..-..+.++ | ...|+.-|+..+. +...|-|-++...+++++++++
T Consensus 477 ~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~~~Lv 556 (720)
T PRK13578 477 KWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEKCDLNSILFLLTPAEDMAKLQQLV 556 (720)
T ss_pred cccccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHH
Confidence 00110000 001111111111122210111111 1 1223333765554 3457777788888999999999
Q ss_pred HHHHHHHHHHHhcChhHH
Q 040741 424 ELTVKQVEKLREMSPLYE 441 (457)
Q Consensus 424 ~~l~~~~~~~~~~~~~~~ 441 (457)
++|.++-+......|+++
T Consensus 557 ~aL~~f~~~~~~~~~~~~ 574 (720)
T PRK13578 557 AMLARFEKHIEDDAPLAE 574 (720)
T ss_pred HHHHHHHHhhccccchhh
Confidence 999988665555556543
No 335
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.79 E-value=2.5e-16 Score=159.11 Aligned_cols=336 Identities=15% Similarity=0.175 Sum_probs=198.4
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCC-CcEEEeCCh
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASP-KEIIFTSGA 127 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~-~~i~~t~g~ 127 (457)
..+.-|+|+.+. +.-.|++.+++.+.+...... . . .....+...++.+.|.++++... +.+.|++||
T Consensus 51 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~-~--~---~~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sG 124 (451)
T PRK06918 51 VDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHT-G--F---NVMMYEPYIELAEKLAALAPGSFDKKVLFLNSG 124 (451)
T ss_pred CCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCc-c--c---cccccHHHHHHHHHHHHhCCCCCCCEEEEcCCc
Confidence 345568887443 357899999999998753211 0 0 00112566778888888886432 479999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCEEEEcC-CCCcchHHHHHHHHh-----cC-----cEEEEEeCCC-----CCCCC------
Q 040741 128 TESNNVSIKGVMHFYKDKKRHVITTQ-TEHKCVLDSCRHLQQ-----EG-----FEITYLPVGA-----DGIVN------ 185 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~~g~~vi~~~-~~h~~~~~~~~~~~~-----~G-----~~v~~v~~~~-----~~~~d------ 185 (457)
|+|++.|++....+. .+.+||... ..|.....+...... .+ ..+..+|.+. .+..+
T Consensus 125 seA~e~AlklAr~~t--gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (451)
T PRK06918 125 AEAVENAVKIARKYT--KRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDF 202 (451)
T ss_pred HHHHHHHHHHHHHHh--CCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHH
Confidence 999999999877542 344555544 455555554432210 00 1122333221 11100
Q ss_pred -HHHHHHhc----C-CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCC--cccCCCCc--cc
Q 040741 186 -LDELRAAI----R-PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKI--PVDVEKWN--VS 250 (457)
Q Consensus 186 -~~~le~~i----~-~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~--~~~~~~~~--~D 250 (457)
++.+++.+ . ++...|+++.++...|.+.| +++|.++|++||+++|.|+++. ++.. .+....++ +|
T Consensus 203 ~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pD 282 (451)
T PRK06918 203 MIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPD 282 (451)
T ss_pred HHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCC
Confidence 22344333 2 45788889988877787665 8899999999999999999986 3321 12222233 78
Q ss_pred EEEeccccccC-CCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 040741 251 LMSLSGHKIYG-PKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRL 329 (457)
Q Consensus 251 i~~~s~~K~~g-~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l 329 (457)
++ +++|.++ .-.+|+++++++..+.+.+...+. . ...++..+++..++++.+.+ ....++.+++.+++
T Consensus 283 i~--t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~------T-~~g~~l~~aaa~a~l~~i~~--~~~~~~~~~~g~~l 351 (451)
T PRK06918 283 LI--TVSKSLGAGVPISGVIGRKEIMDESAPGELGG------T-YAGSPLGCAAALAVLDIIEK--ENLNDRAIELGKVV 351 (451)
T ss_pred EE--eeehhhcCCCccEEEEEcHHHHhccCCCCcCc------C-CCcCHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHH
Confidence 66 5569544 234899999887666554322211 1 24455666666677777755 23344455555555
Q ss_pred HHHHhhc---CCCeEEeCCCCCcccceEEEEEc-c----ccc----hHHHhcc--cCeEecccCccCCCCCChhHHHHHc
Q 040741 330 LNGIKEK---LDGVVVNGSMERRYIGNLNLSFA-Y----VEG----ESLLMGL--KEVAVSSGSACTSASLEPSYVLRAL 395 (457)
Q Consensus 330 ~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~-~----~~~----~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~ 395 (457)
.+.|++. ++.+.-+. ..+.+..+.+. . ... ..+...+ +||.+.++..+
T Consensus 352 ~~~l~~l~~~~~~~~~vr----g~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~-------------- 413 (451)
T PRK06918 352 MNRFEEMKNKYNCIGDVR----GLGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTY-------------- 413 (451)
T ss_pred HHHHHHHHhhCCCceeec----cceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCC--------------
Confidence 5555441 22211111 11343333342 1 111 2233333 58877654211
Q ss_pred CCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 396 GVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 396 g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
.+.+||+++..+++++||+++++|+++++++.
T Consensus 414 -------~~~lrl~p~l~~t~~~id~~l~~l~~~l~~~~ 445 (451)
T PRK06918 414 -------GNVIRVLMPLVITDEQLEEGLTIIEESLQACY 445 (451)
T ss_pred -------CCEEEEECCCccCHHHHHHHHHHHHHHHHHHH
Confidence 16899999988899999999999999998763
No 336
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.79 E-value=1.6e-16 Score=159.69 Aligned_cols=335 Identities=12% Similarity=0.101 Sum_probs=197.0
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCC-CcEEEeCCh
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASP-KEIIFTSGA 127 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~-~~i~~t~g~ 127 (457)
..+.-|+|+.+. +..+|++.+++.+.+.+.. +... .. .. .+...++.+.+.+..+.+. +.++|+++|
T Consensus 38 ~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~-~~~~--~~--~~-~~~~~~la~~l~~~~~~~~~~~~~f~~sG 111 (425)
T PRK08088 38 VEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLS-HTCF--QV--LA-YEPYLELCEKMNQKVPGDFAKKTLLVTTG 111 (425)
T ss_pred CCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCC-Cccc--cc--cC-CHHHHHHHHHHHHhCCCCCCCEEEEeCCc
Confidence 344557887553 3458999999999987531 1111 00 01 1234477777888776543 469999999
Q ss_pred HHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHh-----cCc-----EEEE--EeCCCCCC-C--CHHHHHHh
Q 040741 128 TESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQ-----EGF-----EITY--LPVGADGI-V--NLDELRAA 192 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~-----~G~-----~v~~--v~~~~~~~-~--d~~~le~~ 192 (457)
++|++.+++....+ .++++.|.+....|.....+...... .|. .+.. ++.+.++. . ++++++++
T Consensus 112 sea~e~Alklar~~-~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~ 190 (425)
T PRK08088 112 SEAVENAVKIARAA-TKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERI 190 (425)
T ss_pred HHHHHHHHHHHHHH-hCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHH
Confidence 99999999986653 24445555555556555544332110 011 0111 22222210 0 15568887
Q ss_pred cC-----CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhhc-CCCc--ccC--CCCcccEEEecccc
Q 040741 193 IR-----PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQAL-GKIP--VDV--EKWNVSLMSLSGHK 258 (457)
Q Consensus 193 i~-----~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~~-g~~~--~~~--~~~~~Di~~~s~~K 258 (457)
++ ++.+.|+++.+....|.+.+ +++|.++|++||+++|+|++++. +... ... ....+| +.|++|
T Consensus 191 l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~pd--i~s~sK 268 (425)
T PRK08088 191 FKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAAD--LTTFAK 268 (425)
T ss_pred HHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCCCCC--EEEEec
Confidence 75 45678888888887787766 89999999999999999999873 2211 111 122345 456679
Q ss_pred ccCC-CCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH----
Q 040741 259 IYGP-KGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGI---- 333 (457)
Q Consensus 259 ~~g~-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l---- 333 (457)
.+++ -.+|+++++++..+.+.....+ . ....++..++++...++.... ++..++.++..+++++.|
T Consensus 269 ~l~~G~rig~v~~~~~~~~~~~~~~~~------~-t~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~l~ 339 (425)
T PRK08088 269 SIAGGFPLAGVTGRAEVMDAIAPGGLG------G-TYAGNPIACAAALAVLKVFEQ--ENLLQKANALGEKLKDGLLAIA 339 (425)
T ss_pred cccCCCcceeeEecHHHHhhcCCCCCC------C-CCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHH
Confidence 6553 2489999988766665433211 1 123455666666667766543 233334444444444433
Q ss_pred hhcCCCeEEeCCCCCcccceEEEEEcc-cc--------chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCC
Q 040741 334 KEKLDGVVVNGSMERRYIGNLNLSFAY-VE--------GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMA 402 (457)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~ 402 (457)
.+ .|.+..+.. .+.++.+.+.. .+ ...+...+ +|+.+.++..+
T Consensus 340 ~~-~~~~~~v~g----~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~--------------------- 393 (425)
T PRK08088 340 EK-HPEIGDVRG----LGAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGPY--------------------- 393 (425)
T ss_pred Hh-CCCeEEEec----cceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCCC---------------------
Confidence 33 444322211 14445555521 11 23344333 56665432110
Q ss_pred CCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 403 HTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 403 ~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
.+.|||+++..++++||++.+++|+++++.+
T Consensus 394 ~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 394 YNVLRILVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred CCEEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 2789999998899999999999999998754
No 337
>PRK07036 hypothetical protein; Provisional
Probab=99.78 E-value=2.5e-16 Score=159.04 Aligned_cols=342 Identities=15% Similarity=0.159 Sum_probs=205.9
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhcc-CCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCh
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRY-GNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGA 127 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~ 127 (457)
..+.-|+|+.+. +..+|++.+++.+.+.... ..+ ++....+...++.++|.+++....+.+.|++||
T Consensus 48 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~------~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sG 121 (466)
T PRK07036 48 ADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTP------FGDMTNAPAAELAAKLAELAPGDLNHVFLTTGG 121 (466)
T ss_pred CCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCccccc------ccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCc
Confidence 345568887544 3678999999999887531 111 010112456677788888775444569999999
Q ss_pred HHHHHHHHHHhhhhhcC----CCCEEEEcCC-CCcchHHHHHHHHhc----C-----cEEEEEeCCC-----CCC-----
Q 040741 128 TESNNVSIKGVMHFYKD----KKRHVITTQT-EHKCVLDSCRHLQQE----G-----FEITYLPVGA-----DGI----- 183 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~----~g~~vi~~~~-~h~~~~~~~~~~~~~----G-----~~v~~v~~~~-----~~~----- 183 (457)
|+|++.|++....+... .+.+|+.... .|.....+....... + ..+..++.+. .+.
T Consensus 122 seAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 201 (466)
T PRK07036 122 STAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAF 201 (466)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHH
Confidence 99999999987654321 1356665554 555554443322111 1 1133333221 010
Q ss_pred --CCHHHHHHhcC----CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCC--cccCC---CC
Q 040741 184 --VNLDELRAAIR----PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKI--PVDVE---KW 247 (457)
Q Consensus 184 --~d~~~le~~i~----~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~--~~~~~---~~ 247 (457)
..++.+++.+. ++...|+++.+....|.+.| +++|.++|++||+++|+|+++. +|.. .+... ..
T Consensus 202 ~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv 281 (466)
T PRK07036 202 CDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGI 281 (466)
T ss_pred HHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCC
Confidence 01244555552 45789999999888898887 9999999999999999999985 5432 12222 23
Q ss_pred cccEEEecccccc-CC-CCceEEEEecCCCcccccc-ccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHH
Q 040741 248 NVSLMSLSGHKIY-GP-KGVGALYMRRRPRIRVEPL-INGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITA 324 (457)
Q Consensus 248 ~~Di~~~s~~K~~-g~-~G~G~l~~~~~~~~~~~~~-~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~ 324 (457)
.+|+++++ |.+ |. ..+|+++++++..+.+.+. ..+.....+... ..++..+++..+.++.+++ +...++.++
T Consensus 282 ~PDivt~g--K~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~-~gnpl~~aaa~a~Le~i~~--~~l~~~~~~ 356 (466)
T PRK07036 282 QPDIITFA--KGLTSGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTY-SGHPVACAAALKNIEIMER--EGLCEHVRE 356 (466)
T ss_pred CCCEEEEc--cccccCccccEEEEEcHHHHHHHhcccCcCcccccCCCC-CCCHHHHHHHHHHHHHHHh--CCHHHHHHH
Confidence 57988776 943 32 2489999987765544321 001000011111 3466677777788888765 456777777
Q ss_pred HHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcccc--------c----hHHHhcc--cCeEecccCccCCCCCChhH
Q 040741 325 LHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVE--------G----ESLLMGL--KEVAVSSGSACTSASLEPSY 390 (457)
Q Consensus 325 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~----~~~~~~l--~~i~~~~g~~~~~~~~~~~~ 390 (457)
+.+++++.|++ +....++++ ....+.++.+.|.... . ..+...+ +|+.+.+.
T Consensus 357 ~g~~l~~~L~~-l~~~~~v~~-vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~------------ 422 (466)
T PRK07036 357 VGPYFEERLAS-LRELPLVGD-VRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPL------------ 422 (466)
T ss_pred HHHHHHHHHHH-hccCCCEEE-EEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEeec------------
Confidence 77888777765 322111111 1122444455552111 0 1122222 45554321
Q ss_pred HHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 391 VLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 391 ~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
.+.+||+++..+|++|||++++++.++++++
T Consensus 423 ------------~~~~~l~Ppl~it~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 423 ------------EHLCVLSPPLIITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred ------------CCEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 1578999999999999999999999999877
No 338
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.78 E-value=4.9e-17 Score=145.81 Aligned_cols=352 Identities=14% Similarity=0.131 Sum_probs=214.1
Q ss_pred CCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCC----CccchhhhHHHHHHHHHHHHHHHhCC--CCCcEEEeCChHH
Q 040741 56 GRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHS----RTHLFGWESEVAVETARSQIADLIGA--SPKEIIFTSGATE 129 (457)
Q Consensus 56 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~----~~~~~~~~~~~~~~~~~~~la~~~g~--~~~~i~~t~g~T~ 129 (457)
++.|.|.- ++...-|++.+.+.+...+......- ..|....+....+..+...+.+-.|. ++.++.+|+|+..
T Consensus 30 ~g~imLgg-GNPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs 108 (417)
T COG3977 30 PGAIMLGG-GNPARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQS 108 (417)
T ss_pred CCceeeCC-CCcccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccc
Confidence 44566654 34444466777776665443211000 00111112235666677777777775 5778999999999
Q ss_pred HHHHHHHHhhhhhcCC--CCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC----CC----CCCCHHHHHHhcCCCceE
Q 040741 130 SNNVSIKGVMHFYKDK--KRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG----AD----GIVNLDELRAAIRPDTGL 199 (457)
Q Consensus 130 a~~~al~~~~~~~~~~--g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~----~~----~~~d~~~le~~i~~~t~l 199 (457)
+..-++..+...+... +..++--.++|.++.+++.. +--.+-.+.+ +. .++|.+.|+ +.+++.+
T Consensus 109 ~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~----~d~fVs~kP~iel~~~g~FKY~vDF~~l~--i~e~~g~ 182 (417)
T COG3977 109 AFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLE----EDLFVSAKPNIELLPAGQFKYHVDFEHLH--IGESTGA 182 (417)
T ss_pred hHHHHHHHhcCccCCCcceeEeeccChhhccccccccC----ccceeeccCCcccccccceeeccCHHHcc--cccccce
Confidence 9988888776433211 22344456778777665321 1111111111 12 378888886 6789999
Q ss_pred EEEeccccccccccC---hHHHHHHHHhcCCcEEEehhhhcCCCcccCCCC----c-ccEEEeccccccCC-CCceEEEE
Q 040741 200 ISVMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQALGKIPVDVEKW----N-VSLMSLSGHKIYGP-KGVGALYM 270 (457)
Q Consensus 200 i~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~----~-~Di~~~s~~K~~g~-~G~G~l~~ 270 (457)
||++.+.||||.+.- +.+|.+++++||+++++|.|++.+...+.+.+. + .-++|+|++|..=| ..||+++.
T Consensus 183 ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~~NiilC~SLSK~GLPG~R~GIiIa 262 (417)
T COG3977 183 ICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWNENIILCMSLSKLGLPGSRCGIIIA 262 (417)
T ss_pred EEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccccCCCCEEEEeehhhcCCCCcceeEEEc
Confidence 999999999999865 667888899999999999999987655444332 2 34789999995322 23999999
Q ss_pred ecCCCccccccccCCccccccccCCCChhHHHHHHHH---HHHHHHh-hHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCC
Q 040741 271 RRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSA---CEIAKKE-MDYDHKRITALHDRLLNGIKEKLDGVVVNGSM 346 (457)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~a---l~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 346 (457)
+++.+..+......-. ..++...+..+.-+... +.+.++- .+-.+++.+..-..+++.+.+ .+ ..+.. +
T Consensus 263 ne~viqaitnmn~iis----Lap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~-~~-~~iHk-p 335 (417)
T COG3977 263 NEKVIQAITNMNGIIS----LAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPE-YR-CLIHK-P 335 (417)
T ss_pred cHHHHHHHHhccceee----ecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCc-cc-eeeec-C
Confidence 9887666543321111 11112221111111111 1111111 234444555555566666665 33 33333 3
Q ss_pred CCcccceEEEEEcc--ccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccC--CCCeEEEecCCCCCHHHHH
Q 040741 347 ERRYIGNLNLSFAY--VEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDM--AHTSIRFGIGRFTTEAEVD 420 (457)
Q Consensus 347 ~~~~~~~~~~~~~~--~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~--~~~~iRi~~~~~~t~edid 420 (457)
+. ..++.++|.. ++.+.+.+.| +|+.+.+|..+.++ .+.++ .|.++|+++.. +.+.|+
T Consensus 336 EG--AIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpG------------l~~ewpH~hqC~Rmn~~~--~~~~ie 399 (417)
T COG3977 336 EG--AIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPG------------LDKEWPHTHQCMRMNYVP--EPEKIE 399 (417)
T ss_pred Cc--ceeehhhhccCCCCHHHHHHHHHhCeEEEecccccCCC------------CCCCCCCccceEEEecCC--CHHHHH
Confidence 32 3444455543 5778999988 69999999988763 33333 56799999876 679999
Q ss_pred HHHHHHHHHHHHHHhcC
Q 040741 421 RAIELTVKQVEKLREMS 437 (457)
Q Consensus 421 ~~~~~l~~~~~~~~~~~ 437 (457)
..+.+|.+.+++.-+..
T Consensus 400 ~Gva~lae~ve~~yq~~ 416 (417)
T COG3977 400 KGVAILAEEVERAYQEV 416 (417)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999998876544
No 339
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.78 E-value=1e-16 Score=145.49 Aligned_cols=328 Identities=17% Similarity=0.198 Sum_probs=217.9
Q ss_pred ccCCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhh-HHHHHHHHHHHHHHHhCCCCCcEEEeC
Q 040741 53 RIAGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWE-SEVAVETARSQIADLIGASPKEIIFTS 125 (457)
Q Consensus 53 ~~~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~la~~~g~~~~~i~~t~ 125 (457)
+...+.-|||+-+. +-+.|.+++++.+...... ..++. ..+...++++.+.+++|.+. ++-++
T Consensus 54 wD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLt--------lssrafYnd~~~~f~~~vt~lf~~~k--vlpmn 123 (427)
T KOG1402|consen 54 WDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLT--------LSSRAFYNDVLGEFAEYVTKLFGYDK--VLPMN 123 (427)
T ss_pred ECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhh--------hhhHHHhhhhHHHHHHHHHHhcCcce--eeecc
Confidence 44566778887653 3689999999999887542 11111 23688899999999999876 88899
Q ss_pred ChHHHHHHHHHHhhhh-hcC---C--CCEEEEcCCCCcchHHHHHHH-------HhcC----cEEEEEeCCCCCCCCHHH
Q 040741 126 GATESNNVSIKGVMHF-YKD---K--KRHVITTQTEHKCVLDSCRHL-------QQEG----FEITYLPVGADGIVNLDE 188 (457)
Q Consensus 126 g~T~a~~~al~~~~~~-~~~---~--g~~vi~~~~~h~~~~~~~~~~-------~~~G----~~v~~v~~~~~~~~d~~~ 188 (457)
.|.||.+.+++..+.+ +.. | .-.|+....+|.+...++-.+ ...| ..+.++|-+ |.++
T Consensus 124 TGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~-----d~ea 198 (427)
T KOG1402|consen 124 TGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYG-----DAEA 198 (427)
T ss_pred cchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccC-----CHHH
Confidence 9999999999987732 322 2 123444444433322221111 0001 013333333 8899
Q ss_pred HHHhcC-CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhhcC----CC-cccCCCCcccEEEecccc
Q 040741 189 LRAAIR-PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQALG----KI-PVDVEKWNVSLMSLSGHK 258 (457)
Q Consensus 189 le~~i~-~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~~g----~~-~~~~~~~~~Di~~~s~~K 258 (457)
|+.+++ ++.+.++++.++.+.|++.| ++++.++|++||+++|.|++|..- .+ ..+.....+|++.+. |
T Consensus 199 le~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PDivilg--K 276 (427)
T KOG1402|consen 199 LEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPDIVILG--K 276 (427)
T ss_pred HHHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCCeEEEe--c
Confidence 999986 46788999999999999988 899999999999999999999742 22 334445568999988 8
Q ss_pred c--cCCCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhc
Q 040741 259 I--YGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEK 336 (457)
Q Consensus 259 ~--~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 336 (457)
. .|...+.+++.+++....+.|.-+|. .+| .|+..+....++++.+.+ +++.++...+...+++.|.+
T Consensus 277 alSGG~~Pvsavl~~~~im~~~~pgeHgs------Tyg-gNpLg~~vaiAalevi~e--ekL~era~~lG~~l~~~L~~- 346 (427)
T KOG1402|consen 277 ALSGGVYPVSAVLADDDIMLNIKPGEHGS------TYG-GNPLGCAVAIAALEVIVE--EKLVERAAKLGEILRDQLNK- 346 (427)
T ss_pred cccCCeeeeEEEEecHHHHhccCCCcccc------ccC-CChHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHh-
Confidence 3 34445788888877666666655442 333 344555556679999888 78888889999999998877
Q ss_pred CCCeE--EeCCCCCcccceEEEEEc-----cccchHHHhccc--CeEecccCccCCCCCChhHHHHHcCCCccCCCCeEE
Q 040741 337 LDGVV--VNGSMERRYIGNLNLSFA-----YVEGESLLMGLK--EVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIR 407 (457)
Q Consensus 337 ~~~~~--~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iR 407 (457)
++--. ++. .....+....+.|. +.+.++++-.++ |+...+ ...+.||
T Consensus 347 l~~~~p~~v~-~VRGrGl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkp-----------------------tH~~IiR 402 (427)
T KOG1402|consen 347 LQKKFPHVVK-EVRGRGLLNAIVINPSKTSGQDAWDVCLALKENGLLAKP-----------------------THGNIIR 402 (427)
T ss_pred ccccccchhh-eeeccceEEEEEeccccccchhHHHHHHcccccccccCC-----------------------CCCCeEE
Confidence 43210 011 11112333333332 234556666663 433321 1237999
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHH
Q 040741 408 FGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 408 i~~~~~~t~edid~~~~~l~~~~~ 431 (457)
|.+...++++|+++.++++.+.+.
T Consensus 403 faPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 403 FAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred ecCCcccCHHHHHHHHHHHHHHhc
Confidence 999999999999999999998764
No 340
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.78 E-value=8.7e-20 Score=171.82 Aligned_cols=247 Identities=21% Similarity=0.301 Sum_probs=168.7
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCE
Q 040741 69 VDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRH 148 (457)
Q Consensus 69 ~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~ 148 (457)
..|+++++|.+..... . +|..++...++++.+++++|.+. .+|+++||.|+.+++++++ .+++.
T Consensus 7 ~~~~m~~a~~~a~~gd--------~--~Yg~D~~~~~l~~~i~~l~g~e~--a~f~~sGT~An~~al~~~~----~~~~~ 70 (290)
T PF01212_consen 7 PTPAMLEAMAAANVGD--------D--AYGEDPTTARLEERIAELFGKEA--ALFVPSGTMANQLALRAHL----RPGES 70 (290)
T ss_dssp S-HHEEHHHHHTTSB---------C--CTTSSHHHHHHHHHHHHHHTSSE--EEEESSHHHHHHHHHHHHH----HTTEE
T ss_pred CCHHHHHHHHccccCC--------c--ccCCChhHHHHHHHHHHHcCCCE--EEEeCCCChHHHHHHHHHH----hcCCc
Confidence 7788999995554321 1 24445799999999999999875 7899999999999999999 79999
Q ss_pred EEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC------CceEEEEecccccc-ccccC---hHHH
Q 040741 149 VITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP------DTGLISVMAVNNEI-GVIQP---MEEI 218 (457)
Q Consensus 149 vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~------~t~li~i~~~~~~~-G~~~~---l~~i 218 (457)
||+....|....+..-.....|.++..++.+.+|.+|+++|++++.+ ++++|+++.+++.. |.+++ +++|
T Consensus 71 vi~~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai 150 (290)
T PF01212_consen 71 VICADTAHIHFDETGAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAI 150 (290)
T ss_dssp EEEETTEHHHHSSTTHHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHH
T ss_pred eeccccceeeeeccchhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHH
Confidence 99999988877776444455799999999876699999999999864 57899999998863 77877 5668
Q ss_pred HHHHHhcCCcEEEehhhhcC------CCcccCCCCcccEEEeccccccCCCCceEEEEecCCCcccccc--ccCCccccc
Q 040741 219 GQICKEFKIPFHTDAAQALG------KIPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPL--INGGGQERG 290 (457)
Q Consensus 219 ~~l~~~~~v~li~D~a~~~g------~~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~--~~~~~~~~~ 290 (457)
.++||+||+++|+|+|.-+- ..+.++. .++|++++|++|.+|.++.++++++++.+++.... ..|++.
T Consensus 151 ~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~-~~~D~v~~~~tK~~g~~~Gavl~~~~~~i~~~~~~~k~~gg~~--- 226 (290)
T PF01212_consen 151 SELAREHGLPLHMDGARLANAAAALGVSLAEIA-AGADSVSFGGTKNGGAPGGAVLAGNKEFIAKARRQRKRLGGGM--- 226 (290)
T ss_dssp HHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHH-TTSSEEEEETTSTT-SSSEEEEEESHHHHHHHHHHHHHHTHHH---
T ss_pred HHHHHhCceEEEEehhhHHHhhhcccccHHHHh-hhCCEEEEEEEcccccccceEEEechHHHHHHHHHHHHhccCe---
Confidence 88899999999999997432 1111222 36899999999977655558888887644432222 122211
Q ss_pred cccCCCChhHHHHH--HHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCe
Q 040741 291 IRSGTLPTPLIVGF--GSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGV 340 (457)
Q Consensus 291 ~~~~t~~~~~~~al--~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 340 (457)
+. ..+.....+ ..++ ...+.......+..++++++.+.|+. +++.
T Consensus 227 -~~--~G~~~a~~~~~~~~l-~~l~~~~~~~~~~~~~A~~La~~l~~-~~~~ 273 (290)
T PF01212_consen 227 -RQ--AGVLAAAELYQFAAL-RALELWLERARHANAMAKRLAAGLEA-LGGV 273 (290)
T ss_dssp -HH--TTHHHHHHHHHHHHH-CHEECSHHHHHCHHHHHHCHHHCHHE-ECEE
T ss_pred -ee--cceeeeechhhHHHH-HHHHhhHHHHHHHHHHHHHHHHHHHH-CCCc
Confidence 00 001111000 0111 11122356667788889999999988 5444
No 341
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.78 E-value=4.3e-16 Score=156.79 Aligned_cols=337 Identities=13% Similarity=0.116 Sum_probs=199.1
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCC--CCc-EEEeC
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGAS--PKE-IIFTS 125 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~--~~~-i~~t~ 125 (457)
..+.-|||+.+. +..+|++.+++.+.+....- .+... ...+...++.++|.++++.. ... +++++
T Consensus 36 ~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~-----~~~~~-~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~ 109 (442)
T TIGR00709 36 VEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLP-----LHTLD-LTTPLKDAFIEALLNIIPKRKMDYKLQFPGP 109 (442)
T ss_pred CCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccC-----ccccc-cCcHHHHHHHHHHHHhCCCcCCCccEEEeCC
Confidence 344568887543 36789999999999875210 00101 11256667888888887532 123 45568
Q ss_pred ChHHHHHHHHHHhhhhhcCCCCEEEEcCC-CCcchHHHHHHHH----hcCc-----EEEEEeCCCCCCC--------CH-
Q 040741 126 GATESNNVSIKGVMHFYKDKKRHVITTQT-EHKCVLDSCRHLQ----QEGF-----EITYLPVGADGIV--------NL- 186 (457)
Q Consensus 126 g~T~a~~~al~~~~~~~~~~g~~vi~~~~-~h~~~~~~~~~~~----~~G~-----~v~~v~~~~~~~~--------d~- 186 (457)
||++|++.|++....+ ..+.+|+.... .|.....+..... ..+. .+.+++.+..... +.
T Consensus 110 sGsEA~e~AlklAr~~--tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (442)
T TIGR00709 110 SGADAVEAAIKLAKTY--TGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSN 187 (442)
T ss_pred CHHHHHHHHHHHHHHh--cCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHH
Confidence 9999999999987754 23455665554 5555544443321 1111 1233332211111 11
Q ss_pred ---HHHHHhcC------CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCC--cccC--CCCc
Q 040741 187 ---DELRAAIR------PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKI--PVDV--EKWN 248 (457)
Q Consensus 187 ---~~le~~i~------~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~--~~~~--~~~~ 248 (457)
+.+++.++ ++...|+++.+.+..|.+.| +++|.++|++||+++|.|+++. +|.. .+.. ....
T Consensus 188 ~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~ 267 (442)
T TIGR00709 188 ASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIE 267 (442)
T ss_pred HHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCC
Confidence 22344442 45778888888888887754 8999999999999999999986 4321 1111 1234
Q ss_pred ccEEEecccccc-CCCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 040741 249 VSLMSLSGHKIY-GPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHD 327 (457)
Q Consensus 249 ~Di~~~s~~K~~-g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~ 327 (457)
+|+++++ |.+ |...+|+++++++ .+.+.+...+ . ....++..+++..++++.+++ +...++.+++.+
T Consensus 268 PDiv~~g--K~l~~G~Pigav~~~~~-~~~~~~~~~~------~-T~~gnpla~aaa~a~L~~i~~--~~l~~~~~~~g~ 335 (442)
T TIGR00709 268 PDFVVMS--KAVGGGLPLAVLLIAPE-FDAWQPAGHT------G-TFRGNQLAMVTGTEALNYWKD--DNLAQNAQERGE 335 (442)
T ss_pred CcEEEEc--ccccCCcccEEEEEchH-HhccCCCcCC------C-CCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHH
Confidence 7988865 943 3234899999876 3333221111 1 124566667777778887765 355667777777
Q ss_pred HHHHHHhhcCCCeEEeCCCCCcccceEEEEEcccc---------------chHHHhcc--cCeEecccCccCCCCCChhH
Q 040741 328 RLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVE---------------GESLLMGL--KEVAVSSGSACTSASLEPSY 390 (457)
Q Consensus 328 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~l--~~i~~~~g~~~~~~~~~~~~ 390 (457)
++.+.|++......++++ ....+.++.+.+.... ...+...+ +|+.+.+..
T Consensus 336 ~l~~~L~~l~~~~~~v~~-vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~----------- 403 (442)
T TIGR00709 336 RITSFLDDMIKEHPCIGN-VRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGG----------- 403 (442)
T ss_pred HHHHHHHHHHHhCCCeee-eeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecC-----------
Confidence 777776651111111221 1223455555553210 11222222 466654311
Q ss_pred HHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 391 VLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 391 ~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
...+.|||.++..+|++|||+++++++++++++
T Consensus 404 ----------~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 436 (442)
T TIGR00709 404 ----------REGEVFRLLCPITIDQEECEEGISRFKQAVEEA 436 (442)
T ss_pred ----------CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 112789999999999999999999999999875
No 342
>PRK07483 hypothetical protein; Provisional
Probab=99.78 E-value=4.8e-16 Score=156.12 Aligned_cols=348 Identities=15% Similarity=0.149 Sum_probs=207.4
Q ss_pred cCCCcEEecCCCC------CCCCHHHHHHHHHHHhhcc-CCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCC
Q 040741 54 IAGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRY-GNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSG 126 (457)
Q Consensus 54 ~~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g 126 (457)
...+.-|+|+.+. +..+|++.+++.+.+.... .++. ....+...++.++|++++....+.++|++|
T Consensus 26 D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~-------~~~~~~~~~lae~L~~~~p~~~~~v~f~~s 98 (443)
T PRK07483 26 DATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTS-------FFTTEPAEALADRLVAAAPAGLEHVYFVSG 98 (443)
T ss_pred eCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCcccc-------ccCCHHHHHHHHHHHHhCCCCCCEEEEcCC
Confidence 3455678887653 3678999999999987542 1111 011245667888888887543457999999
Q ss_pred hHHHHHHHHHHhhhhhc----CCCCEEEE-cCCCCcchHHHHHHHHhc----C-----cEEEEEeCCCCCC-C-------
Q 040741 127 ATESNNVSIKGVMHFYK----DKKRHVIT-TQTEHKCVLDSCRHLQQE----G-----FEITYLPVGADGI-V------- 184 (457)
Q Consensus 127 ~T~a~~~al~~~~~~~~----~~g~~vi~-~~~~h~~~~~~~~~~~~~----G-----~~v~~v~~~~~~~-~------- 184 (457)
||+|++.|++....++. ..+.+||. ....|.....+....... . ..+..++...... .
T Consensus 99 GsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 178 (443)
T PRK07483 99 GSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDE 178 (443)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHH
Confidence 99999999998775531 12345665 445566655544322100 0 1122232211000 0
Q ss_pred -----CHHHHHHhcC----CCceEEEEecccc-ccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc--cc--CC
Q 040741 185 -----NLDELRAAIR----PDTGLISVMAVNN-EIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP--VD--VE 245 (457)
Q Consensus 185 -----d~~~le~~i~----~~t~li~i~~~~~-~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~--~~--~~ 245 (457)
.++++++++. ++...|+++.+.. ..|.+.| +++|.++|++||+++|+|+++. +|... +. ..
T Consensus 179 ~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~ 258 (443)
T PRK07483 179 AYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEED 258 (443)
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhc
Confidence 1356676553 4678899999876 3577765 8999999999999999999986 43221 11 11
Q ss_pred CCcccEEEecccc-ccCC-CCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHH
Q 040741 246 KWNVSLMSLSGHK-IYGP-KGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRIT 323 (457)
Q Consensus 246 ~~~~Di~~~s~~K-~~g~-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~ 323 (457)
...+|+++++ | +.|. ..+|+++++++..+.+.+.. + ....+.. ...++..+++..+.++.+++ +...++.+
T Consensus 259 gv~PDiv~~g--K~l~gG~~Pi~av~~~~~i~~~~~~~~-~-~~~h~~T-~~gnpl~~aaa~a~l~~i~~--~~l~~~~~ 331 (443)
T PRK07483 259 GVAPDLVTIA--KGLGAGYQPIGAVLASDRIYDAIADGS-G-FFQHGHT-YLGHATACAAALAVQRVIAE--DGLLANVR 331 (443)
T ss_pred CCCCCeeeeh--hhhccCccccEEEEEcHHHHHHHhcCC-C-ccccCCC-CCCCHHHHHHHHHHHHHHHh--cCHHHHHH
Confidence 2358999887 9 4433 24899999877554443210 0 0000011 13466677777788888776 45666677
Q ss_pred HHHHHHHHHHhhc---CCCeEEeCCCCCcccceEEEEEccc-------c-----chHHHhcc--cCeEecccCccCCCCC
Q 040741 324 ALHDRLLNGIKEK---LDGVVVNGSMERRYIGNLNLSFAYV-------E-----GESLLMGL--KEVAVSSGSACTSASL 386 (457)
Q Consensus 324 ~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-------~-----~~~~~~~l--~~i~~~~g~~~~~~~~ 386 (457)
++.+++++.|++. ++.+ ++ ....+.++.+.+... + ...+...+ +|+.+.+...+..
T Consensus 332 ~~g~~l~~~L~~l~~~~~~i---~~-vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~--- 404 (443)
T PRK07483 332 ARGEQLRARLRERLGQHPHV---GD-IRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTID--- 404 (443)
T ss_pred HHHHHHHHHHHHHHhcCCCe---ee-EeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCcccc---
Confidence 7777777766541 3322 11 112244444544211 0 01233333 5776643211100
Q ss_pred ChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHh
Q 040741 387 EPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLRE 435 (457)
Q Consensus 387 ~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~ 435 (457)
...++.|||.++..++++|||+++++|+++++++..
T Consensus 405 -------------~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~~ 440 (443)
T PRK07483 405 -------------GVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAALA 440 (443)
T ss_pred -------------CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 011268999999999999999999999999987653
No 343
>PRK07481 hypothetical protein; Provisional
Probab=99.78 E-value=3.1e-16 Score=157.89 Aligned_cols=343 Identities=15% Similarity=0.112 Sum_probs=202.6
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCC-CCCcEEEeCCh
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGA-SPKEIIFTSGA 127 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~-~~~~i~~t~g~ 127 (457)
..+.-|+|+.+. +...|++.+|+.+.+....-... ..+. ..+...++.++|.++++- +.+.++|++||
T Consensus 39 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~----~~~~-~~~~~~~lae~L~~~~~~~~~~~v~f~~sG 113 (449)
T PRK07481 39 IDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYST----FDGT-THPRAIELSYELIDMFAPEGMRRVFFSSGG 113 (449)
T ss_pred CCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceec----cccc-CCHHHHHHHHHHHHhcCCCCCCEEEEcCch
Confidence 345568887542 25789999999999875321100 0011 124566788888888742 23469999999
Q ss_pred HHHHHHHHHHhhhhhc---C-CCCEEEEcCC-CCcchHHHHHHHHhcC---------cEEEEEeCCCC-----CCCCHHH
Q 040741 128 TESNNVSIKGVMHFYK---D-KKRHVITTQT-EHKCVLDSCRHLQQEG---------FEITYLPVGAD-----GIVNLDE 188 (457)
Q Consensus 128 T~a~~~al~~~~~~~~---~-~g~~vi~~~~-~h~~~~~~~~~~~~~G---------~~v~~v~~~~~-----~~~d~~~ 188 (457)
|+|++.|++....+.. + .+.+|+.... .|.....+........ ..+..++.+.. +.-|+++
T Consensus 114 sEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~ 193 (449)
T PRK07481 114 SDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEE 193 (449)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHH
Confidence 9999999998776542 1 2355665554 4554544432211100 11222322210 0013333
Q ss_pred --------HHHhcC----CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc----ccCCCC
Q 040741 189 --------LRAAIR----PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP----VDVEKW 247 (457)
Q Consensus 189 --------le~~i~----~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~----~~~~~~ 247 (457)
+|++|. ++...|+++.++...|.+.| ++++.++|++||+++|.|+++. +|... ......
T Consensus 194 ~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv 273 (449)
T PRK07481 194 LARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGV 273 (449)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCC
Confidence 344442 46789999999888888766 8999999999999999999986 43221 111223
Q ss_pred cccEEEeccccc-cCC-CCceEEEEecCCCcccccccc-CCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHH
Q 040741 248 NVSLMSLSGHKI-YGP-KGVGALYMRRRPRIRVEPLIN-GGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITA 324 (457)
Q Consensus 248 ~~Di~~~s~~K~-~g~-~G~G~l~~~~~~~~~~~~~~~-~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~ 324 (457)
.+|+++++ |. .|. ..+|+++++++..+.+.+... .+....+.. ...++..+++..++++.+++ +...++.++
T Consensus 274 ~PDiv~~g--Kgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T-~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~ 348 (449)
T PRK07481 274 KPDIMCLA--KGITSGYVPLGATMVNARIADAFEANADFGGAIMHGYT-YSGHPVACAAALATLDIVVR--EDLPANAAK 348 (449)
T ss_pred CCCEEEEe--ecccCCCcCceEEEEcHHHHHHHhccCccccccccCCC-CCCCHHHHHHHHHHHHHHHh--hhHHHHHHH
Confidence 58998887 94 332 248999998765544432110 000000011 13456667777778887765 456667777
Q ss_pred HHHHHHHHHhhcCC-CeEEeCCCCCcccceEEEEEcccc------------chHHHhcc--cCeEecccCccCCCCCChh
Q 040741 325 LHDRLLNGIKEKLD-GVVVNGSMERRYIGNLNLSFAYVE------------GESLLMGL--KEVAVSSGSACTSASLEPS 389 (457)
Q Consensus 325 ~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l--~~i~~~~g~~~~~~~~~~~ 389 (457)
+.+++.+.|++ +. ...++++ ....+.++.+.+.... ...+...+ +|+.+.+.
T Consensus 349 ~g~~l~~~L~~-l~~~~~~i~~-vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~----------- 415 (449)
T PRK07481 349 RGAYLLEGLQP-LKERFELVGD-VRGKGLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPS----------- 415 (449)
T ss_pred HHHHHHHHHHH-HhhcCCCeEE-EeecceEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEec-----------
Confidence 77777777766 21 1111111 1122444445552110 01222222 56665431
Q ss_pred HHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 390 YVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 390 ~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
.+.+||++...+|++|||+++++++++++++
T Consensus 416 -------------g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 416 -------------GTKIILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred -------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 1468999999999999999999999999765
No 344
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.77 E-value=2.7e-16 Score=157.69 Aligned_cols=323 Identities=15% Similarity=0.173 Sum_probs=197.3
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChH
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGAT 128 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T 128 (457)
..+.-|+|+.+. +...|++.+++.+.+..... . +.. .+...++.++|.+.+. ..+.+.|+++||
T Consensus 50 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~--~------~~~-~~~~~~la~~l~~~~p-~~~~v~f~~sGs 119 (428)
T PRK12389 50 VDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVL--Y------GTP-TELEIEFAKMLKEAIP-SLEKVRFVNSGT 119 (428)
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCc--c------CCC-CHHHHHHHHHHHHhCC-CCcEEEEeCCHH
Confidence 345568886433 25679999999999875321 0 111 1455677778877775 245799999999
Q ss_pred HHHHHHHHHhhhhhcCCCCEEEEcCC-CCcchHHHHHHHHh----------cCc------EEEEEeCCCCCCCCHHHHHH
Q 040741 129 ESNNVSIKGVMHFYKDKKRHVITTQT-EHKCVLDSCRHLQQ----------EGF------EITYLPVGADGIVNLDELRA 191 (457)
Q Consensus 129 ~a~~~al~~~~~~~~~~g~~vi~~~~-~h~~~~~~~~~~~~----------~G~------~v~~v~~~~~~~~d~~~le~ 191 (457)
+|++.|++....+ ..+.+|+.... .|.....+...... .|+ ++..++. .|++.+++
T Consensus 120 eA~e~AlklAr~~--tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~ 192 (428)
T PRK12389 120 EAVMTTIRVARAY--TGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPF-----NDIEALKE 192 (428)
T ss_pred HHHHHHHHHHHHh--hCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCC-----CCHHHHHH
Confidence 9999999987754 33456665554 45544443332210 011 1111221 27889988
Q ss_pred hcC---CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhhcCCCccc----CCCCcccEEEecccc-c
Q 040741 192 AIR---PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQALGKIPVD----VEKWNVSLMSLSGHK-I 259 (457)
Q Consensus 192 ~i~---~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~~g~~~~~----~~~~~~Di~~~s~~K-~ 259 (457)
.+. ++...|+++.+.+..|.+.| +++|.++|++||+++|+|++++....... .....+|+++++ | +
T Consensus 193 ~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~~gv~PDivt~g--K~l 270 (428)
T PRK12389 193 ALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGVEPDLTALG--KII 270 (428)
T ss_pred HHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcchhhHHhCCCCCeeeec--hhh
Confidence 885 45788999999998999888 99999999999999999999874322111 112257887665 9 4
Q ss_pred cCCCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhc---
Q 040741 260 YGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEK--- 336 (457)
Q Consensus 260 ~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~--- 336 (457)
.|.-.+|+++++++..+.+.+. +... . ......++..+++..++++.+++ +...++.+++.+++++.|++.
T Consensus 271 ggG~Pi~av~~~~~i~~~~~~~--~~~~-~-~~T~~gnpl~~Aaala~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~ 344 (428)
T PRK12389 271 GGGLPIGAYGGRKDIMEQVAPL--GPAY-Q-AGTMAGNPASMAAGIACLEVLQQ--EGVYEKLDRLGAMLEEGILEAAEK 344 (428)
T ss_pred cCCCceeEEeEHHHHHhhhccC--CCcc-c-ccCCccCHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333478888887765554321 1000 0 01114566677777788888765 346677777888887777651
Q ss_pred CCCe-EEeCCCCCcccceEEEEEcccc--------------chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCc
Q 040741 337 LDGV-VVNGSMERRYIGNLNLSFAYVE--------------GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDE 399 (457)
Q Consensus 337 ~~~~-~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~ 399 (457)
++.+ .+.. ..+++.+.+.... ...+...+ +|+.+.+..
T Consensus 345 ~~~~~~v~r-----~~g~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-------------------- 399 (428)
T PRK12389 345 HGITITINR-----LKGALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSK-------------------- 399 (428)
T ss_pred CCCCEEEEe-----cCcEEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecCC--------------------
Confidence 2321 1111 1234344442110 11222223 466554321
Q ss_pred cCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 400 DMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 400 ~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
... +.++..+|++|||++++++++++++
T Consensus 400 ---~~~--~~~~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 400 ---YEA--WFLTTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred ---CCC--eeecCCCCHHHHHHHHHHHHHHHHh
Confidence 012 2356678999999999999999864
No 345
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.77 E-value=1.1e-15 Score=154.14 Aligned_cols=337 Identities=15% Similarity=0.127 Sum_probs=201.2
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCC---CcEEEe-
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASP---KEIIFT- 124 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~---~~i~~t- 124 (457)
..+.-|||+.+. +..+|++.+++.+.+.+...... .++ ..+...++.++|.+.+..+. +.++|+
T Consensus 60 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~-----~~~-~~~~~~~la~~L~~~~p~~~~~~~~v~f~~ 133 (464)
T PRK06938 60 VEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHT-----LDL-TTPVKDQFVQDLFASLPEAFAREAKIQFCG 133 (464)
T ss_pred CCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhcccc-----ccc-CCHHHHHHHHHHHHhCcccccccceEEEeC
Confidence 455568887443 35789999999999864221100 011 12455566677777764321 246665
Q ss_pred CChHHHHHHHHHHhhhhhcCCCCEEEEcC-CCCcchHHHHHHHHhc-------C--cEEEEEeCCCCCC-----------
Q 040741 125 SGATESNNVSIKGVMHFYKDKKRHVITTQ-TEHKCVLDSCRHLQQE-------G--FEITYLPVGADGI----------- 183 (457)
Q Consensus 125 ~g~T~a~~~al~~~~~~~~~~g~~vi~~~-~~h~~~~~~~~~~~~~-------G--~~v~~v~~~~~~~----------- 183 (457)
++|++|++.|++....+ ..+.+||... ..|.....+....... + ..+..++.+.+..
T Consensus 134 ~SGSEAve~AlklAr~~--tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 211 (464)
T PRK06938 134 PTGTDAVEAALKLVKTA--TGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGV 211 (464)
T ss_pred CCcHHHHHHHHHHHHHh--hCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHH
Confidence 79999999999987754 2345566544 4555555544322100 0 1233444332111
Q ss_pred -CCHHHHHHhcCC------CceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc--cc--CCCC
Q 040741 184 -VNLDELRAAIRP------DTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP--VD--VEKW 247 (457)
Q Consensus 184 -~d~~~le~~i~~------~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~--~~--~~~~ 247 (457)
.+++.+++.+.. +...|+++.+....|.+.| ++++.++|++||+++|.|+++. +|... +. ....
T Consensus 212 ~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv 291 (464)
T PRK06938 212 RANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGI 291 (464)
T ss_pred HHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCC
Confidence 136778888752 4788999999888888765 8999999999999999999986 43221 11 1123
Q ss_pred cccEEEecccc-ccCCCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 040741 248 NVSLMSLSGHK-IYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALH 326 (457)
Q Consensus 248 ~~Di~~~s~~K-~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~ 326 (457)
.+|+++++ | +.|.-.+|+++++++. +.+.+...+ . ....++..+++..+.++.+++ +...++.+++.
T Consensus 292 ~PDiv~~g--KglggG~PlsAv~~~~~~-~~~~~~~~~------~-T~~gnpla~Aaa~a~L~~l~~--~~l~~~~~~~G 359 (464)
T PRK06938 292 IPDVVVLS--KAIGGSLPLAVVVYREWL-DTWQPGAHA------G-TFRGNQMAMAAGSATLRYIKE--HRLAEHAAAMG 359 (464)
T ss_pred CCCEEEee--ccccCCCceEEEeehhHh-hccCCCCCC------C-CCCcCHHHHHHHHHHHHHHHH--hHHHHHHHHHH
Confidence 58999887 9 4443448999988663 333221111 1 113456677777778888766 35566666667
Q ss_pred HHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcccc-----------c----hHHHhcc--cCeEecccCccCCCCCChh
Q 040741 327 DRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVE-----------G----ESLLMGL--KEVAVSSGSACTSASLEPS 389 (457)
Q Consensus 327 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~----~~~~~~l--~~i~~~~g~~~~~~~~~~~ 389 (457)
+++++.|++......++++ ....+.++.+.+.... . ..+...+ +|+.+..+.
T Consensus 360 ~~l~~~L~~l~~~~~~i~~-VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g---------- 428 (464)
T PRK06938 360 ERLREHLRQLQRDYPQLGD-VRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILELGG---------- 428 (464)
T ss_pred HHHHHHHHHHHHhCCCeee-eeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEeecC----------
Confidence 7777666551011111111 1122444445552110 0 1222222 566554321
Q ss_pred HHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 390 YVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 390 ~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
..++.|||.++..+|++|||+++++++++++++
T Consensus 429 -----------~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 429 -----------RHGSVVRFLPPLIITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred -----------CCCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 012689999999999999999999999999764
No 346
>PRK07046 aminotransferase; Validated
Probab=99.77 E-value=1.7e-15 Score=152.39 Aligned_cols=326 Identities=14% Similarity=0.109 Sum_probs=196.6
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChH
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGAT 128 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T 128 (457)
..+--|+|+.+. +..+|++.+++.+.+.... ... .. .+...++.+.|.+.++. +.+.|+++||
T Consensus 72 ~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~--~~~------~~-~~~~~~lAe~l~~~~~~--~~v~F~nSGt 140 (453)
T PRK07046 72 VDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGL--TTM------LP-SEDAAWVGEELARRFGL--PYWQVATTAT 140 (453)
T ss_pred CCCCEEEEecccccccccCCCCHHHHHHHHHHHHhCC--CCC------CC-CHHHHHHHHHHHHHhCC--CEEEEECCHH
Confidence 345568886433 2467999999999987532 111 11 14566777888888764 4699999999
Q ss_pred HHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhc----------Cc------EEEEEeCCCCCCCCHHHHHHh
Q 040741 129 ESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQE----------GF------EITYLPVGADGIVNLDELRAA 192 (457)
Q Consensus 129 ~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~----------G~------~v~~v~~~~~~~~d~~~le~~ 192 (457)
+|+..|++..+.+ ..+++|+.....|.+........... |. .+..++. .|++++++.
T Consensus 141 EA~e~AlrlAR~~--TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----nd~~~l~~~ 213 (453)
T PRK07046 141 DANRFVLRWARAV--TGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-----NDLAALEAA 213 (453)
T ss_pred HHHHHHHHHHHHh--hCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-----CCHHHHHHH
Confidence 9999999987764 34566776555444432221111000 11 1111221 288999998
Q ss_pred cC-CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh----cCCCcccCCCCcccEEEecccc-ccCC
Q 040741 193 IR-PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA----LGKIPVDVEKWNVSLMSLSGHK-IYGP 262 (457)
Q Consensus 193 i~-~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~----~g~~~~~~~~~~~Di~~~s~~K-~~g~ 262 (457)
+. .+...|+++.+....|.+.| ++++.++|++||+++|+|++++ .|... ......+|+++++ | +.|.
T Consensus 214 l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~-~~~gv~PDi~t~g--K~lggG 290 (453)
T PRK07046 214 LADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYT-RAHGLEPDFLVVG--KPIAGG 290 (453)
T ss_pred hCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchh-HHhCCCccceeeh--hhhcCC
Confidence 85 46788999999888888876 8999999999999999999985 33321 1112357988765 9 4443
Q ss_pred CCceEEEEecCCCccccccccCCccccccccC--CCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhc---C
Q 040741 263 KGVGALYMRRRPRIRVEPLINGGGQERGIRSG--TLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEK---L 337 (457)
Q Consensus 263 ~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~--t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~ 337 (457)
..+|+++++++..+.+.+.............+ ..++..+++..+.++.+.+ +...++.+++.+++++.|.+. .
T Consensus 291 ~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~--~~~~~~~~~~g~~l~~~L~~l~~~~ 368 (453)
T PRK07046 291 VPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMT--EAAYAHMLALAARLAAGLRAVIARH 368 (453)
T ss_pred CcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHHhC
Confidence 44899999887655543211000000001112 3456667777778887755 334556666666666655431 2
Q ss_pred CC-eEEeCCCCCcccceEEEEEcccc-----------ch----HHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCc
Q 040741 338 DG-VVVNGSMERRYIGNLNLSFAYVE-----------GE----SLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDE 399 (457)
Q Consensus 338 ~~-~~~~~~~~~~~~~~~~~~~~~~~-----------~~----~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~ 399 (457)
+. ..+.+. +.++.+.|.... .. .+...+ +||.+.+.
T Consensus 369 ~~~~~v~g~-----G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~--------------------- 422 (453)
T PRK07046 369 GLPWHVTRV-----GARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITPF--------------------- 422 (453)
T ss_pred CCCeEEEEe-----CcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEecc---------------------
Confidence 21 123232 334444442110 01 111122 45554321
Q ss_pred cCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 400 DMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 400 ~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
.+.+++++. ++++|||+++++++++++++.
T Consensus 423 ---~~~~~~~p~--~t~~did~~~~~~~~~l~~~~ 452 (453)
T PRK07046 423 ---HNMMLVCPA--TTAADVDRLVAAFDACLGELL 452 (453)
T ss_pred ---cCcEEEeCC--CCHHHHHHHHHHHHHHHHHHh
Confidence 145677764 799999999999999998753
No 347
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.77 E-value=5.7e-16 Score=155.10 Aligned_cols=339 Identities=11% Similarity=0.087 Sum_probs=202.9
Q ss_pred CCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHH
Q 040741 56 GRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATE 129 (457)
Q Consensus 56 ~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~ 129 (457)
.+.-|||+.+. +..+|++.+++.+.+.... ...+ +....+...++.++|+++++...+.+.|+++||+
T Consensus 43 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~-~~~~-----~~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGse 116 (427)
T TIGR00508 43 DGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMS-HVMF-----GGFTHKPAIELCQKLVKMTPNALDCVFLADSGSV 116 (427)
T ss_pred CCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcC-Cccc-----cccCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHH
Confidence 34458887653 3678999999999987531 1111 0011145567778888887644467999999999
Q ss_pred HHHHHHHHhhhhhcC---C-CCEEEEcCC-CCcchHHHHHHHHhc--------Cc--EEEEEeCCCC------CCCCHHH
Q 040741 130 SNNVSIKGVMHFYKD---K-KRHVITTQT-EHKCVLDSCRHLQQE--------GF--EITYLPVGAD------GIVNLDE 188 (457)
Q Consensus 130 a~~~al~~~~~~~~~---~-g~~vi~~~~-~h~~~~~~~~~~~~~--------G~--~v~~v~~~~~------~~~d~~~ 188 (457)
|++.+++....+... + +.+||.... .|.....+....... +. .+..++.... ..-|+++
T Consensus 117 A~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 196 (427)
T TIGR00508 117 AVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITP 196 (427)
T ss_pred HHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHH
Confidence 999999987755421 1 345665554 455444433221100 00 0112221111 0125677
Q ss_pred HHHhcC---CCceEEEEecc-ccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc----ccCCCCcccEEEec
Q 040741 189 LRAAIR---PDTGLISVMAV-NNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP----VDVEKWNVSLMSLS 255 (457)
Q Consensus 189 le~~i~---~~t~li~i~~~-~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~----~~~~~~~~Di~~~s 255 (457)
+++.+. ++...|+++.+ +...|...+ +++|.++|++||+++|+|++|. +|... .......+|++++
T Consensus 197 l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~~~- 275 (427)
T TIGR00508 197 LAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPDILCV- 275 (427)
T ss_pred HHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCCEEEe-
Confidence 777774 35678888886 565665543 8999999999999999999984 33211 1112235788875
Q ss_pred ccccc-CC-CCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 040741 256 GHKIY-GP-KGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGI 333 (457)
Q Consensus 256 ~~K~~-g~-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l 333 (457)
.|.+ |. ..+++++.+++..+.+.....+. ... ......++..+++..++++.+.+ +...++.+++.+++++.|
T Consensus 276 -gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~~-~~~-~~T~~g~p~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L 350 (427)
T TIGR00508 276 -GKALTGGYMTLSATVTTDKVAQTISSGEAGC-FMH-GPTFMGNPLACAVAEASLAILLE--GEWQKQVSAIENQLKREL 350 (427)
T ss_pred -chhhhcCcccceEEEEcHHHHHHHhcCCCCc-ccc-CCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHH
Confidence 5943 32 23688888776544443211000 000 00112456777777778887765 345688888888888888
Q ss_pred hhcCCCeEEeCCCCCcccceEEEEEccc-cchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEec
Q 040741 334 KEKLDGVVVNGSMERRYIGNLNLSFAYV-EGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGI 410 (457)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~ 410 (457)
++ +......+ .....+.++.+.+... ....+...+ +||.+.+. ...+||++
T Consensus 351 ~~-l~~~~~i~-~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gv~~~~~------------------------~~~l~~~p 404 (427)
T TIGR00508 351 SP-LRKNPVVK-DVRVLGAIGVVEMYKPVNVEELQKKFVEQGVWIRPF------------------------GKLIYVMP 404 (427)
T ss_pred HH-hhcCCCEE-eEeccccEEEEEECCccCHHHHHHHHHHCCeEEEec------------------------CCEEEEEC
Confidence 77 42211111 1112245555555322 223444444 57665321 15799999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHH
Q 040741 411 GRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 411 ~~~~t~edid~~~~~l~~~~~~ 432 (457)
+..+|++|||++++++++++++
T Consensus 405 pl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 405 PYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred CCCCCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999853
No 348
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.76 E-value=8.3e-17 Score=156.27 Aligned_cols=330 Identities=15% Similarity=0.142 Sum_probs=210.7
Q ss_pred CCCCHHHHHHHHHHHhhcc-CCCCCCccchhhhHHHHHHHHHHHHHHHhC-CCCCcEEEeCChHHHHHHHHHHhhhhhcC
Q 040741 67 TPVDPRVLDAMLPFYLSRY-GNPHSRTHLFGWESEVAVETARSQIADLIG-ASPKEIIFTSGATESNNVSIKGVMHFYKD 144 (457)
Q Consensus 67 ~~~~~~v~~a~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~la~~~g-~~~~~i~~t~g~T~a~~~al~~~~~~~~~ 144 (457)
+.-.+++.+|+.+.+.+.. .++.. .+.+...++.++|+++.+ .+-+.++|++||++|++.+++-..+++..
T Consensus 59 Gh~~~~i~~Ai~~Q~~~l~~~~~~~-------~t~~Pa~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~ 131 (449)
T COG0161 59 GHGRPEIAEAIKKQLDKLPHVMFGG-------FTHEPAIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRA 131 (449)
T ss_pred CcCCHHHHHHHHHHHHhCCchhhcc-------cCCchHHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHh
Confidence 3567999999999988742 12222 122347788899999988 33567999999999999999988887764
Q ss_pred CC----CEEEEc-CCCCcchHHHHHHHHhc----------CcEEEEEeCCC------CCC------CCHHHHHHhcC---
Q 040741 145 KK----RHVITT-QTEHKCVLDSCRHLQQE----------GFEITYLPVGA------DGI------VNLDELRAAIR--- 194 (457)
Q Consensus 145 ~g----~~vi~~-~~~h~~~~~~~~~~~~~----------G~~v~~v~~~~------~~~------~d~~~le~~i~--- 194 (457)
.| .++|.- +.+|.....+....... -..+..++.+. ++. -+.++||+.|.
T Consensus 132 ~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g 211 (449)
T COG0161 132 RGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHG 211 (449)
T ss_pred cCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcC
Confidence 33 336654 44566666554333100 01222333332 111 22567777774
Q ss_pred -CCceEEEEeccccc-cccccC----hHHHHHHHHhcCCcEEEehhhh-cCCC--cccCCC--CcccEEEecccc-c-cC
Q 040741 195 -PDTGLISVMAVNNE-IGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKI--PVDVEK--WNVSLMSLSGHK-I-YG 261 (457)
Q Consensus 195 -~~t~li~i~~~~~~-~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~--~~~~~~--~~~Di~~~s~~K-~-~g 261 (457)
++...++++.+..- .|++.| ++++.++|++|||++|.|++-. +|.. .+.... ..+|+++.+ | + .|
T Consensus 212 ~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~~a--KGLT~G 289 (449)
T COG0161 212 PETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDILCLA--KGLTGG 289 (449)
T ss_pred cccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeeeec--cccccc
Confidence 34567777777776 777766 9999999999999999999864 4432 222222 347999888 9 4 45
Q ss_pred CCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeE
Q 040741 262 PKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVV 341 (457)
Q Consensus 262 ~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 341 (457)
.-.+|+++++++..+.+.... .+....++.+ +.++..+++..+.++++++ +.+.++.+++..++.+.|++.+.+..
T Consensus 290 Y~Pl~a~l~~~~I~~~~~~~~-~~~f~HG~TY-sghPlacAaAla~L~i~e~--e~l~~~~~~~~~~l~~~L~~~l~~~p 365 (449)
T COG0161 290 YLPLSAVLTSDRIYEAFSDGD-AGAFMHGHTY-SGNPLACAAALANLDILEE--EDLLERVAEIGAYLQAGLQAALADHP 365 (449)
T ss_pred chhhHhHhhhHHHHHHHhccc-CCeeccCCcc-ccCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHhcccCC
Confidence 456899998887655543321 1112222333 5667777777788888877 66777777888888888876223222
Q ss_pred EeCCCCCcccceEEEEEcc-cc---------chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEe
Q 040741 342 VNGSMERRYIGNLNLSFAY-VE---------GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFG 409 (457)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~-~~---------~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~ 409 (457)
.+++. ...+.+..+.+.. .. ...+.... +|+.+++.. +.|-++
T Consensus 366 ~VgdV-R~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~g------------------------~~i~~~ 420 (449)
T COG0161 366 LVGDV-RGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPLG------------------------DVIYLM 420 (449)
T ss_pred cEEEe-eccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeecC------------------------CEEEEc
Confidence 33321 1123333334421 11 12222222 678777542 688899
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 410 IGRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 410 ~~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
+.+..|++|||++++++.+++++..
T Consensus 421 PPliit~~eid~l~~~l~~al~~~~ 445 (449)
T COG0161 421 PPLIITREEIDELVDALREALDETL 445 (449)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998754
No 349
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.76 E-value=8.8e-16 Score=153.34 Aligned_cols=332 Identities=14% Similarity=0.134 Sum_probs=196.7
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChH
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGAT 128 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T 128 (457)
..+.-|+|+.+. +...|++.+++.+.+..... . +.. .+...++.+.|.+.++...+.+.|+++||
T Consensus 50 ~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~--~------~~~-~~~~~~la~~L~~~~~~~~~~v~f~~SGs 120 (433)
T PRK00615 50 SLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGTS--Y------GLT-SEQEILFAEELFSYLGLEDHKIRFVSSGT 120 (433)
T ss_pred CCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCCC--C------CCC-CHHHHHHHHHHHHhCCCCcCEEEEeCchH
Confidence 345567887543 35689999999999875321 1 111 24566778888888865435699999999
Q ss_pred HHHHHHHHHhhhhhcCCCCEEEEcCC-CCcch---HHHHHHHHhcCcEE-EEE--eC-CCC----CCCCHHHHHHhcC--
Q 040741 129 ESNNVSIKGVMHFYKDKKRHVITTQT-EHKCV---LDSCRHLQQEGFEI-TYL--PV-GAD----GIVNLDELRAAIR-- 194 (457)
Q Consensus 129 ~a~~~al~~~~~~~~~~g~~vi~~~~-~h~~~---~~~~~~~~~~G~~v-~~v--~~-~~~----~~~d~~~le~~i~-- 194 (457)
+|++.|++..+.+ ..+.+|+.... .|... ..+........... ... +. ... ...|++++++.+.
T Consensus 121 EA~e~AiklAr~~--tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 198 (433)
T PRK00615 121 EATMTAVRLARGI--TGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSL 198 (433)
T ss_pred HHHHHHHHHHHHh--hCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhc
Confidence 9999999987754 23456665444 45433 11211100000000 000 00 000 1127888888874
Q ss_pred -CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-c--CCCc-ccCCCCcccEEEeccccccC-CCC
Q 040741 195 -PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-L--GKIP-VDVEKWNVSLMSLSGHKIYG-PKG 264 (457)
Q Consensus 195 -~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~--g~~~-~~~~~~~~Di~~~s~~K~~g-~~G 264 (457)
++...|+++.+.+..|.+.| +++|.++|++||+++|+|+++. + |... .......+|++++ .|.+| .-.
T Consensus 199 ~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G~~ga~~~~gv~PDi~~~--gK~lggG~p 276 (433)
T PRK00615 199 GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVAQGGAAAIYHVKPDITVY--GKILGGGLP 276 (433)
T ss_pred CCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccccccHhHHHHhcCCCCCeEEE--cccccCCcc
Confidence 45679999999998898887 5699999999999999999994 2 1110 0111225788765 59544 223
Q ss_pred ceEEEEecCCCccccccccCCccccccccC--CCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcC--CCe
Q 040741 265 VGALYMRRRPRIRVEPLINGGGQERGIRSG--TLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKL--DGV 340 (457)
Q Consensus 265 ~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~--t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~ 340 (457)
+|+++++++..+.+.+. +. .+..+ ..++..+++..++++.+++ +...++.+++.+++.+.|++.+ .++
T Consensus 277 ~~av~~~~~i~~~~~~~--~~----~~~~~T~~g~p~~~aa~la~L~~i~~--~~~~~~~~~~g~~l~~~l~~~~~~~g~ 348 (433)
T PRK00615 277 AAAVVAHKSIMDHLAPE--GT----IFQAGTLSGNPLAMAAGKASINLCRE--QGFYTQLSTLEQNFLSPIEEMIRSQGF 348 (433)
T ss_pred eeeeeecHHHHhhhcCC--CC----cccCCCCcccHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 79999988766655321 10 01112 3467778888888888765 3456677777777766555411 122
Q ss_pred EEeCCCCCcccceEEEEEcccc----------ch----HHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCC
Q 040741 341 VVNGSMERRYIGNLNLSFAYVE----------GE----SLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHT 404 (457)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~----------~~----~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~ 404 (457)
.+.. .+.+.++.+.|.... .. .+...+ +||.+.+...
T Consensus 349 ~v~~---~r~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~------------------------ 401 (433)
T PRK00615 349 PVSL---VRYGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSPF------------------------ 401 (433)
T ss_pred CeEE---EeeceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCccc------------------------
Confidence 1111 112455555553211 11 222232 4655543210
Q ss_pred eEEEecCCCCCHHHHHHHHHHHHHHHHHHHh
Q 040741 405 SIRFGIGRFTTEAEVDRAIELTVKQVEKLRE 435 (457)
Q Consensus 405 ~iRi~~~~~~t~edid~~~~~l~~~~~~~~~ 435 (457)
-...++..+|++|||+++++++++++++-.
T Consensus 402 -~~~~ls~~ht~~did~~~~a~~~~~~~~~~ 431 (433)
T PRK00615 402 -EASFLSSAHSMENLDYAQNVLIDSLEKVFS 431 (433)
T ss_pred -cccceecCCCHHHHHHHHHHHHHHHHHHhc
Confidence 012356667999999999999999987643
No 350
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.76 E-value=8.8e-16 Score=154.12 Aligned_cols=325 Identities=17% Similarity=0.149 Sum_probs=196.6
Q ss_pred CCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHH
Q 040741 56 GRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATE 129 (457)
Q Consensus 56 ~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~ 129 (457)
.+.-|+|+.+. +..+|++.+++.+.+.... .. ++ ..+...++.++|++++. ..+.++|++||++
T Consensus 48 dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~---~~-----~~-~~~~~~~la~~L~~~~~-~~~~v~~~~sGse 117 (426)
T PRK00062 48 DGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGL---SF-----GA-PTELEVELAELVIELVP-SIEMVRMVNSGTE 117 (426)
T ss_pred CCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCC---cC-----CC-CCHHHHHHHHHHHHhCC-CCCEEEEecCHHH
Confidence 34457776543 2578999999999997622 11 11 12455678888888764 2456999999999
Q ss_pred HHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHh-----------cCcEE----EEEeCCCCCCCCHHHHHHhcC
Q 040741 130 SNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQ-----------EGFEI----TYLPVGADGIVNLDELRAAIR 194 (457)
Q Consensus 130 a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~-----------~G~~v----~~v~~~~~~~~d~~~le~~i~ 194 (457)
|++.+++....+ ..+++||.....|.+....+..... .+... ..+..+ ..|++++++.+.
T Consensus 118 A~e~Aik~a~~~--~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~d~~~l~~~i~ 192 (426)
T PRK00062 118 ATMSAIRLARGY--TGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAP---YNDLEAVEELFE 192 (426)
T ss_pred HHHHHHHHHHHH--hCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcC---CCCHHHHHHHHH
Confidence 999999987754 2356777666655555433222100 01100 011111 137899998885
Q ss_pred ---CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhhcCCC--cc--cCCCCcccEEEeccccccC-C
Q 040741 195 ---PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQALGKI--PV--DVEKWNVSLMSLSGHKIYG-P 262 (457)
Q Consensus 195 ---~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~~g~~--~~--~~~~~~~Di~~~s~~K~~g-~ 262 (457)
+++++|+++.+.+..|.+.| +++|.++|++||+++|+|++|..... .. ......+|++ +++|.+| .
T Consensus 193 ~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~~~~~~~~~pDi~--~~gK~l~~G 270 (426)
T PRK00062 193 EYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGGAQGYYGVTPDLT--TLGKIIGGG 270 (426)
T ss_pred hCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCccHHHHhCCCcchH--hhhhHhhCC
Confidence 36789999999888999988 99999999999999999999973211 11 1111235764 5569544 2
Q ss_pred CCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhc---CCC
Q 040741 263 KGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEK---LDG 339 (457)
Q Consensus 263 ~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~ 339 (457)
..+|+++++++..+.+..... ... ......++..+++..++++.++++ ...++.+++.+++++.|.+. .+.
T Consensus 271 ~p~ga~~~~~~i~~~~~~~~~---~~~-~~T~~~~p~~~aaa~a~L~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~ 344 (426)
T PRK00062 271 LPVGAFGGRREIMEQLAPLGP---VYQ-AGTLSGNPLAMAAGLATLKLLKEP--GFYEELEALTKRLAEGLKEAAKKAGI 344 (426)
T ss_pred CcceeeeEHHHHHHhhccCCC---cee-cccCcCCHHHHHHHHHHHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 237888888766555532110 000 111245667777777888887663 45566666666666666531 322
Q ss_pred eE-EeCCCCCcccceEEEEEcccc--------------chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCC
Q 040741 340 VV-VNGSMERRYIGNLNLSFAYVE--------------GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMA 402 (457)
Q Consensus 340 ~~-~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~ 402 (457)
.. +.+ .+.++.+.+.... ...+...+ +|+.+.+..
T Consensus 345 ~~~vrg-----~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~~----------------------- 396 (426)
T PRK00062 345 PLTVNR-----VGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPSQ----------------------- 396 (426)
T ss_pred ceEEEE-----ecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEeecCC-----------------------
Confidence 11 111 2344444442110 12333333 566654321
Q ss_pred CCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 403 HTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 403 ~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
.+.++++ ..++++||++++++++++++++
T Consensus 397 ~~~~~~~--~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 397 FEAGFVS--AAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred cCceeee--ccCCHHHHHHHHHHHHHHHHhh
Confidence 1345554 5679999999999999998764
No 351
>PRK06917 hypothetical protein; Provisional
Probab=99.76 E-value=1.4e-15 Score=152.84 Aligned_cols=346 Identities=13% Similarity=0.116 Sum_probs=204.0
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChH
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGAT 128 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T 128 (457)
..+.-|||+.+. +...|++.+++.+.+.... +. +...+. .+...++.+.|.+++....+.++|+++||
T Consensus 28 ~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~---~~--~~~~~~-~~~~~~lae~L~~~~p~~~~~v~f~~sGs 101 (447)
T PRK06917 28 QNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVS---FV--YRSQFT-SEPAEKLAKKLSDLSPGDLNWSFFVNSGS 101 (447)
T ss_pred CCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCc---Cc--cccccC-CHHHHHHHHHHHHhCCCCCCEEEEeCChH
Confidence 345568887543 3578999999999987631 10 000111 24566788888888864445699999999
Q ss_pred HHHHHHHHHhhhhhc----CCCCEEEEcCC-CCcchHHHHHHHHhcCc---------EEEEEeCCCC------C------
Q 040741 129 ESNNVSIKGVMHFYK----DKKRHVITTQT-EHKCVLDSCRHLQQEGF---------EITYLPVGAD------G------ 182 (457)
Q Consensus 129 ~a~~~al~~~~~~~~----~~g~~vi~~~~-~h~~~~~~~~~~~~~G~---------~v~~v~~~~~------~------ 182 (457)
+|++.|++....++. ..+.+|+.... .|.....+.......+. .+..++.+.. .
T Consensus 102 EAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 181 (447)
T PRK06917 102 EANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQ 181 (447)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHH
Confidence 999999998765432 12356666554 55555554432211100 1122221110 0
Q ss_pred CCCHHHHHHhcC----CCceEEEEecccccc-ccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc--c--cCCCCc
Q 040741 183 IVNLDELRAAIR----PDTGLISVMAVNNEI-GVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP--V--DVEKWN 248 (457)
Q Consensus 183 ~~d~~~le~~i~----~~t~li~i~~~~~~~-G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~--~--~~~~~~ 248 (457)
.-|++.++++++ ++...|+++.+.... |.+.| +++|.++|++||+++|+|+++. +|... + ......
T Consensus 182 ~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~ 261 (447)
T PRK06917 182 LACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVE 261 (447)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCC
Confidence 013466777774 357888999887643 46655 8899999999999999999986 33221 1 111224
Q ss_pred ccEEEeccccc-cCC-CCceEEEEecCCCccccccccCCccccccc--cCCCChhHHHHHHHHHHHHHHhhHHHHHHHHH
Q 040741 249 VSLMSLSGHKI-YGP-KGVGALYMRRRPRIRVEPLINGGGQERGIR--SGTLPTPLIVGFGSACEIAKKEMDYDHKRITA 324 (457)
Q Consensus 249 ~Di~~~s~~K~-~g~-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~--~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~ 324 (457)
+|+++++ |. .|. ..+|+++++++..+.+.+.. +. .+. ....++..+++..++++.+.+ +...++.++
T Consensus 262 PDi~~~g--K~l~~G~~Pi~a~~~~~~i~~~~~~~~---~~--~~~~~T~~gnpl~~aaa~a~l~~l~~--~~l~~~~~~ 332 (447)
T PRK06917 262 PDIMTLG--KGLGAGYTPIAATVVSDRVMEPILRGS---RS--IMSGHTLSANPLSAATALAVLEYMEK--HNLPEKAAE 332 (447)
T ss_pred CCEEEee--ehhccCCcceEEEEEcHHHHHHHhccC---cc--cccccCCCCCHHHHHHHHHHHHHHHH--CCHHHHHHH
Confidence 7987775 94 333 14799999876554443210 00 011 113466677777778887765 356667777
Q ss_pred HHHHHHHHHhhcCC-CeEEeCCCCCcccceEEEEEccc--------c----chHHHhcc--cCeEecccCccCCCCCChh
Q 040741 325 LHDRLLNGIKEKLD-GVVVNGSMERRYIGNLNLSFAYV--------E----GESLLMGL--KEVAVSSGSACTSASLEPS 389 (457)
Q Consensus 325 ~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------~----~~~~~~~l--~~i~~~~g~~~~~~~~~~~ 389 (457)
+.+++++.|++ +. ...++++ ....+.++.+.|... . ...+...+ +|+.+.+.....
T Consensus 333 ~g~~l~~~L~~-l~~~~~~i~~-vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~------- 403 (447)
T PRK06917 333 KGEYLIKGLQK-VQQQSTIIGD-VRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQ------- 403 (447)
T ss_pred HHHHHHHHHHH-HHhcCCCEEE-EeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEeccccc-------
Confidence 77777777665 21 1111111 112244444555211 0 11222222 577664321000
Q ss_pred HHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 390 YVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 390 ~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
.....+.+||+++..+|++|||++++++.++++++
T Consensus 404 ---------~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 438 (447)
T PRK06917 404 ---------DGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEM 438 (447)
T ss_pred ---------CCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 00112689999999999999999999999999876
No 352
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.75 E-value=2.4e-16 Score=141.78 Aligned_cols=356 Identities=15% Similarity=0.140 Sum_probs=251.3
Q ss_pred ccCCCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhh-hHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHH
Q 040741 53 RIAGRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGW-ESEVAVETARSQIADLIGASPKEIIFTSGATESN 131 (457)
Q Consensus 53 ~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~ 131 (457)
..+.+.|||--++-+.+|+.+.+.|.+.+...-.- .-..|..|- .|...-+.....++.++|+..+++.++++-|.-+
T Consensus 63 ~~d~~~iYlcGNSLGLmPK~t~~~~~~eLDkWak~-av~gH~~GkvPW~~~De~il~l~~~iVGA~e~EvavmNsLTvNl 141 (465)
T KOG3846|consen 63 SDDKPVIYLCGNSLGLMPKSTRNSINAELDKWAKC-AVEGHFKGKVPWVSIDEPILPLLAPIVGAQENEVAVMNSLTVNL 141 (465)
T ss_pred CCCCCeEEEeccccccCchhhHhHHHHHHHHHHhh-hhhcccccccceeecchhhhhhhhhhccCCchhhhhHhhhhhHH
Confidence 34578899999999999999999988887653110 000122121 1112344566788999999888899999988878
Q ss_pred HHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHH-HHhcCcEEE--EEeCC---CCCCCCHHHHHHhcCC---CceEEEE
Q 040741 132 NVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRH-LQQEGFEIT--YLPVG---ADGIVNLDELRAAIRP---DTGLISV 202 (457)
Q Consensus 132 ~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~-~~~~G~~v~--~v~~~---~~~~~d~~~le~~i~~---~t~li~i 202 (457)
+..+.++-... .+.-+|+.....+++...++.. ++..|..+. .+.++ ....+-.+++...|+. ..++|++
T Consensus 142 h~Ll~sFyKPT-ekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~f 220 (465)
T KOG3846|consen 142 HSLLISFYKPT-EKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCF 220 (465)
T ss_pred HHHHHHhcCCc-chhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEe
Confidence 77777665221 2345688888888888877664 355576542 22222 2234666777777753 4689999
Q ss_pred eccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccc--cCCCCceEEEEecCCCccccc
Q 040741 203 MAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKI--YGPKGVGALYMRRRPRIRVEP 280 (457)
Q Consensus 203 ~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~--~g~~G~G~l~~~~~~~~~~~~ 280 (457)
+.+++.||..+++.+|...-+..|+++=.|-||++|-+++.+..|++|+.+.+.+|+ -|+.|+|-+++.++......|
T Consensus 221 SGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~p 300 (465)
T KOG3846|consen 221 SGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWGVDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLP 300 (465)
T ss_pred ecceeecccccchhhhhhcccCCCcEechhhhhhhcCCceEEeecCCceEEEeeecccccCCCccceeeeehhhhcchhh
Confidence 999999999999999997667779999999999999999999999999999999994 467789999999887777777
Q ss_pred cccCCccc------------------cccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhc-----
Q 040741 281 LINGGGQE------------------RGIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEK----- 336 (457)
Q Consensus 281 ~~~~~~~~------------------~~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~----- 336 (457)
.+.||... .+++...|+.....++...++.+.+ .+.+.+.+.--+..|+.-.++..
T Consensus 301 rl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~ 380 (465)
T KOG3846|consen 301 RLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKH 380 (465)
T ss_pred HHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCc
Confidence 77765321 3567778999999999999999876 47777777766666665555441
Q ss_pred -----CCCeEEeCCC-CCcccceEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEE
Q 040741 337 -----LDGVVVNGSM-ERRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRF 408 (457)
Q Consensus 337 -----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi 408 (457)
.+-+.+..+. ....+.-+.+.|... -..+.+.| +|+... ....+.||+
T Consensus 381 ~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp-~~~vfqeL~krGv~~D-----------------------kR~PNvIRv 436 (465)
T KOG3846|consen 381 PLRTEKLFFTIITPTSTDERGCQLSLYFSSP-TPKVFQELHKRGVIGD-----------------------KRRPNVIRV 436 (465)
T ss_pred hhhhcceeEEEeCCcccccccceEEEEeCCC-chHHHHHHHHcCeecc-----------------------ccCCCceEe
Confidence 1223444332 122344455555432 24455555 444332 223489999
Q ss_pred ec-CCCCCHHHHHHHHHHHHHHHHHHH
Q 040741 409 GI-GRFTTEAEVDRAIELTVKQVEKLR 434 (457)
Q Consensus 409 ~~-~~~~t~edid~~~~~l~~~~~~~~ 434 (457)
++ ..+++..||-.++++|.++.+.+.
T Consensus 437 APvpLYN~f~Dvy~f~n~L~e~~d~~e 463 (465)
T KOG3846|consen 437 APVPLYNTFSDVYIFVNALNEAMDKLE 463 (465)
T ss_pred ecchhhccHHHHHHHHHHHHHHHHHhh
Confidence 96 557999999999999999987654
No 353
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.75 E-value=2e-15 Score=144.97 Aligned_cols=325 Identities=18% Similarity=0.163 Sum_probs=202.6
Q ss_pred CCcEEecCCCCC------CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHH
Q 040741 56 GRPLYLDMQATT------PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATE 129 (457)
Q Consensus 56 ~~~i~l~~~~~~------~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~ 129 (457)
.+--|.|+...- .-+|.|.+|+.+.++.-. .+|..+ +.--++.+.+.++++. .+.+-|+++||+
T Consensus 51 DGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~--------~fg~Pt-e~Ei~~Aell~~~~p~-~e~vrfvnSGTE 120 (432)
T COG0001 51 DGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGL--------SFGAPT-ELEVELAELLIERVPS-IEKVRFVNSGTE 120 (432)
T ss_pred CCCEeeehhccCcccccCCCCHHHHHHHHHHHHhcC--------CCCCCC-HHHHHHHHHHHHhcCc-ccEEEEecchhH
Confidence 444566654432 347889999999987531 223222 3455566888888885 245999999999
Q ss_pred HHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCc-----------------EEEEEeCCCCCCCCHHHHHHh
Q 040741 130 SNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGF-----------------EITYLPVGADGIVNLDELRAA 192 (457)
Q Consensus 130 a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~-----------------~v~~v~~~~~~~~d~~~le~~ 192 (457)
|...+++..+.+ ..+++|+..+..|....+.+..-...|. .+..+|-+ |++.++++
T Consensus 121 AtmsAiRlARa~--TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-----D~~al~~~ 193 (432)
T COG0001 121 ATMSAIRLARAY--TGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN-----DLEALEEA 193 (432)
T ss_pred HHHHHHHHHHHh--hCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC-----CHHHHHHH
Confidence 999999987755 4567777766666666555443211121 12233333 89999999
Q ss_pred cCC---CceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhhcCCCccc----CCCCcccEEEecccc-cc
Q 040741 193 IRP---DTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQALGKIPVD----VEKWNVSLMSLSGHK-IY 260 (457)
Q Consensus 193 i~~---~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~~g~~~~~----~~~~~~Di~~~s~~K-~~ 260 (457)
++. +.+.|+++.+....|.+.| +++|.++|+++|+++|.|++......+.. .....+|+.++. | +.
T Consensus 194 ~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PDlttlG--KiIG 271 (432)
T COG0001 194 FEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPDLTTLG--KIIG 271 (432)
T ss_pred HHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcchhhhh--hhhc
Confidence 864 5788999999988999988 88899999999999999999875433321 112246777666 9 55
Q ss_pred CCCCceEEEEecCCCccccccccCCccccccccCC--CChhHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHhh
Q 040741 261 GPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGT--LPTPLIVGFGSACEIAKKE---MDYDHKRITALHDRLLNGIKE 335 (457)
Q Consensus 261 g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t--~~~~~~~al~~al~~~~~~---~~~~~~~~~~~~~~l~~~l~~ 335 (457)
|.-.+|++.++++..+.+.|.-.- +..|| .|+..+++-.++++.++.. ++++.+...++.+-+++.+.+
T Consensus 272 GGlP~ga~gGr~eiM~~~~p~g~v------yqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~ 345 (432)
T COG0001 272 GGLPIGAFGGRAEIMEQLAPLGPV------YQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAER 345 (432)
T ss_pred CCcceeeeccHHHHHhhhCCCCCc------cccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 555599999998877665544321 22233 3455666666677766641 444444444455555555544
Q ss_pred cCCCeEEeCCCCCcccceEEEEEccccc-----------h---HHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCc
Q 040741 336 KLDGVVVNGSMERRYIGNLNLSFAYVEG-----------E---SLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDE 399 (457)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~---~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~ 399 (457)
-++.+.. .+...++.+.|..... + .+...+ +||.+.++.+
T Consensus 346 --~g~~~~v---~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~~------------------- 401 (432)
T COG0001 346 --HGIPLTV---NRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLAPSQF------------------- 401 (432)
T ss_pred --hCCCeEE---eeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhCCcccCCccc-------------------
Confidence 2222211 1225555555543111 1 111111 4555544321
Q ss_pred cCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHh
Q 040741 400 DMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLRE 435 (457)
Q Consensus 400 ~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~ 435 (457)
. ..-++..++++|||+.+++++++++++..
T Consensus 402 ----e--a~flS~ahte~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 402 ----E--AGFLSTAHTEEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred ----c--ceeeecccCHHHHHHHHHHHHHHHHHhhc
Confidence 1 13345567899999999999999988753
No 354
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.75 E-value=9e-16 Score=154.56 Aligned_cols=323 Identities=17% Similarity=0.151 Sum_probs=193.3
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChH
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGAT 128 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T 128 (457)
..+.-|+|+.+. +..+|++.+++.+.+.+.... +.. .+...++.++|.+.+.. .+.+.|+++||
T Consensus 96 ~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~~~--------~~~-~~~~~~lAe~l~~~~p~-~~~v~f~~SGs 165 (474)
T PLN02482 96 VDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTSF--------GAP-CLLENVLAEMVIDAVPS-VEMVRFVNSGT 165 (474)
T ss_pred CCCCEEEEecccccccccCCCCHHHHHHHHHHHhhCCCC--------CCC-CHHHHHHHHHHHHhCCC-CCEEEEeCChH
Confidence 345567886442 256799999999999753211 111 14555677778887753 45799999999
Q ss_pred HHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHH-----------hcCc------EEEEEeCCCCCCCCHHHHHH
Q 040741 129 ESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQ-----------QEGF------EITYLPVGADGIVNLDELRA 191 (457)
Q Consensus 129 ~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~-----------~~G~------~v~~v~~~~~~~~d~~~le~ 191 (457)
+|++.|++....+ ..+++|+.....|.+......... ..|. .+..++. .|++++++
T Consensus 166 EA~e~AlklAR~~--tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----nd~~~l~~ 238 (474)
T PLN02482 166 EACMGVLRLARAY--TGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-----NDLEAVKK 238 (474)
T ss_pred HHHHHHHHHHHHh--cCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-----CChHHHHH
Confidence 9999999987754 334566665544444322111100 0011 1112222 27889998
Q ss_pred hcC---CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhhcCCCc--c--cCCCCcccEEEecccccc
Q 040741 192 AIR---PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQALGKIP--V--DVEKWNVSLMSLSGHKIY 260 (457)
Q Consensus 192 ~i~---~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~~g~~~--~--~~~~~~~Di~~~s~~K~~ 260 (457)
.+. .+...|+++.+....|.+.| +++|.++|++||+++|+|+++...... . ......+|++++ .|.+
T Consensus 239 ~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~~ga~~~~gv~PDi~t~--gK~l 316 (474)
T PLN02482 239 LFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAYGGAQEYFGITPDLTTL--GKVI 316 (474)
T ss_pred HHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCcchHhHHhCCCCCEEEe--cchh
Confidence 885 35678999999888898877 678999999999999999998521110 0 011124788765 4943
Q ss_pred -CCCCceEEEEecCCCccccccccCCccccccccCC--CChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcC
Q 040741 261 -GPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGT--LPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKL 337 (457)
Q Consensus 261 -g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t--~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 337 (457)
|...+|+++++++..+.+.+. + . .+..+| .++..+++..++++.+++ +...++.+++.+++++.|.+..
T Consensus 317 ggG~Pigav~g~~ei~~~~~~~--~-~---~~~~~T~~gnpl~~aAala~L~~l~~--~~~~~~~~~~g~~l~~~L~~l~ 388 (474)
T PLN02482 317 GGGLPVGAYGGRREIMEMVAPA--G-P---MYQAGTLSGNPLAMTAGIHTLKRLQQ--PGTYEYLDKITKKLIQGILEAG 388 (474)
T ss_pred hCCCceEEEEEcHHHHHhhccC--C-C---cccccCcchhHHHHHHHHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHH
Confidence 333488888887765554321 1 0 011223 456667777778887765 4567777778888877776511
Q ss_pred CC--eEEeCCCCCcccceEEEEEcc--c--------cc----hHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCc
Q 040741 338 DG--VVVNGSMERRYIGNLNLSFAY--V--------EG----ESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDE 399 (457)
Q Consensus 338 ~~--~~~~~~~~~~~~~~~~~~~~~--~--------~~----~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~ 399 (457)
.. +.+.. ....+++.+.|.. + .+ ..+...+ +||.+.+... .
T Consensus 389 ~~~g~~~~~---~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~-----------------~- 447 (474)
T PLN02482 389 KKAGHEMCG---GYISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQF-----------------E- 447 (474)
T ss_pred HhcCCCEEE---cccceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccCC-----------------C-
Confidence 11 11111 0112344444421 0 01 1222222 5666543110 0
Q ss_pred cCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 400 DMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 400 ~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
. + .++..+|++|||++++++++++++
T Consensus 448 ----~--~-~psl~ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 448 ----A--G-FTSLAHTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred ----C--C-cCCCCCCHHHHHHHHHHHHHHHHh
Confidence 0 1 266778999999999999999875
No 355
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.74 E-value=2.6e-15 Score=150.35 Aligned_cols=334 Identities=14% Similarity=0.158 Sum_probs=189.3
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHH-HhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCCh
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPF-YLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGA 127 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~ 127 (457)
..+.-|||+.+. +..+|++.+++.+. ......+..+ .......+..+.+.+.+++++.-+.+.++|++||
T Consensus 55 ~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~~~---~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SG 131 (464)
T TIGR00699 55 VDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINRPA---LGNFPSKDWAKILKEGILKVAPKGQDQVWTGMSG 131 (464)
T ss_pred CCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhccccc---CCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCc
Confidence 455578888664 36789999999984 2322111111 0111112233333333455654333579999999
Q ss_pred HHHHHHHHHHhhhhhcCC-------------------------CCEEEEcCCC-CcchHHHHHHHHhc-----C---cEE
Q 040741 128 TESNNVSIKGVMHFYKDK-------------------------KRHVITTQTE-HKCVLDSCRHLQQE-----G---FEI 173 (457)
Q Consensus 128 T~a~~~al~~~~~~~~~~-------------------------g~~vi~~~~~-h~~~~~~~~~~~~~-----G---~~v 173 (457)
++|++.|++....++..+ +.+||..... |.....+....... + ..+
T Consensus 132 sEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~ 211 (464)
T TIGR00699 132 SDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDW 211 (464)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCc
Confidence 999999999876553211 2256665554 55554444332110 1 111
Q ss_pred EEEeCCCC----C----------CCCHHHHHHhcC---CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEe
Q 040741 174 TYLPVGAD----G----------IVNLDELRAAIR---PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTD 232 (457)
Q Consensus 174 ~~v~~~~~----~----------~~d~~~le~~i~---~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D 232 (457)
..+|.+.. + .-+++++++++. ++...|+++.+....|.+.| +++|.++|++||+++|+|
T Consensus 212 ~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~D 291 (464)
T TIGR00699 212 PQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVD 291 (464)
T ss_pred eecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 22222210 0 014566777774 35789999999988899887 999999999999999999
Q ss_pred hhhh-cCCCc--ccCC--CC--cccEEEeccccccCCCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHH
Q 040741 233 AAQA-LGKIP--VDVE--KW--NVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFG 305 (457)
Q Consensus 233 ~a~~-~g~~~--~~~~--~~--~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~ 305 (457)
+++. +|... +... .. .+|+++++ |.+|.. |+++.+ +......+...+ .....++..+++..
T Consensus 292 EV~tGfGrtG~~fa~e~~gv~~~PDi~t~g--K~lg~g--G~~~~~-~~~~~~~~~~~~-------~T~~gnp~~~aaa~ 359 (464)
T TIGR00699 292 EVQTGVGATGKFWAHEHWNLDDPPDMVTFS--KKFQTA--GYFFHD-PAFRPNKPYRQF-------NTWMGDPSRALILR 359 (464)
T ss_pred eeeeCCCCCcchhHHHhcCCCCCCCEEEeh--hhhccC--Cccccc-hhccCCCCcccc-------cCCCCCHHHHHHHH
Confidence 9985 33211 1111 11 38997776 966432 333332 211110111111 11245566677777
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHhhc---CCCeEEeCCCC-CcccceEEEEEcccc-chHHHhcc--cCeEeccc
Q 040741 306 SACEIAKKEMDYDHKRITALHDRLLNGIKEK---LDGVVVNGSME-RRYIGNLNLSFAYVE-GESLLMGL--KEVAVSSG 378 (457)
Q Consensus 306 ~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~l--~~i~~~~g 378 (457)
++++.+++ +...++.+++.+++++.|++. +|.+ +++.. ...+.++.+.+.... ...+...+ +|+.+...
T Consensus 360 a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~--i~~vRg~G~Glm~gie~~~~~~~~~i~~~~~~~Gvl~~~~ 435 (464)
T TIGR00699 360 EIIQEIKR--KDLLENVAHVGDYLYTGLEDLQKKYPEF--IQNLRGKGRGTFIAWDTPDEAKRDKLLKKARNNGVNIGGC 435 (464)
T ss_pred HHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCc--eeeecccCeEEEEEEecCCHHHHHHHHHHHHHCCcEEecC
Confidence 78887765 455566666666666666541 3321 11100 012444444443211 22333333 56665321
Q ss_pred CccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHH
Q 040741 379 SACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 379 ~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~ 430 (457)
+.+.|||.++..+|++|||.++++|++++
T Consensus 436 -----------------------g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 436 -----------------------GVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred -----------------------CCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 12689999999999999999999998763
No 356
>PRK06149 hypothetical protein; Provisional
Probab=99.74 E-value=2.4e-15 Score=164.59 Aligned_cols=333 Identities=13% Similarity=0.074 Sum_probs=205.5
Q ss_pred CCcEEecCCCCC----CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHH
Q 040741 56 GRPLYLDMQATT----PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESN 131 (457)
Q Consensus 56 ~~~i~l~~~~~~----~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~ 131 (457)
.+.-|||+.+.. ..+|++.+++.+.+.....+ + .+ ..+...++.++|++++....+.++|++||++|+
T Consensus 583 dG~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~~--~---~~---~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~ 654 (972)
T PRK06149 583 AGRSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNTN--S---RF---HYAAVAEFSERLAALAPDGLDTVFLVNSGSEAN 654 (972)
T ss_pred CCCEEEECCCCccccCCCCHHHHHHHHHHHHhcccc--c---cc---cCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHH
Confidence 445577765432 46899999999988754211 1 11 125677888999999853335699999999999
Q ss_pred HHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHh----cCc------EEEEEeCCCC--C---CCC-----HHHHHH
Q 040741 132 NVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQ----EGF------EITYLPVGAD--G---IVN-----LDELRA 191 (457)
Q Consensus 132 ~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~----~G~------~v~~v~~~~~--~---~~d-----~~~le~ 191 (457)
+.|++....+. ++.+.|.+....|.....+...... .+. .+..++.+.. + ..| .+++++
T Consensus 655 e~AlklAr~~t-gr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 733 (972)
T PRK06149 655 DLAIRLAWAAS-GRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVA 733 (972)
T ss_pred HHHHHHHHHhc-CCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHH
Confidence 99999766542 4444455556667666554322110 000 1222322211 1 111 234433
Q ss_pred hcC------CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhh-hcCCCcc---cCC--CCcccEEEec
Q 040741 192 AIR------PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQ-ALGKIPV---DVE--KWNVSLMSLS 255 (457)
Q Consensus 192 ~i~------~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~-~~g~~~~---~~~--~~~~Di~~~s 255 (457)
.++ ++...|+++.+....|.+.| +++|.++|++||+++|+|+++ ++|.... ... ...+|+++++
T Consensus 734 ~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~g 813 (972)
T PRK06149 734 QLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITMA 813 (972)
T ss_pred HHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEEEec
Confidence 332 45788999999988898888 999999999999999999999 5554321 111 2357988665
Q ss_pred cccccC-CCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHh
Q 040741 256 GHKIYG-PKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIK 334 (457)
Q Consensus 256 ~~K~~g-~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~ 334 (457)
|..| .-.+|+++++++..+.+... +. . +.....++..+++..+.++.+++ +.+.++.+++.+++++.|+
T Consensus 814 --K~lg~G~Pl~av~~~~~i~~~~~~~--~~-~---~sT~~gnP~~~aaala~L~~i~~--e~l~~~~~~~G~~l~~~L~ 883 (972)
T PRK06149 814 --KGMGNGHPLGAVITRREIAEALEAE--GY-F---FSSTGGSPVSCRIGMAVLDVLRE--EKLQENARRVGDHLKARLE 883 (972)
T ss_pred --ccccCCeeeEEEEEcHHHHhhhccC--Cc-c---cCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHH
Confidence 9433 33489999998765554431 10 0 11124566777777778888876 4566777777777777776
Q ss_pred hc---CCCeEEeCCCCCcccceEEEEEccc------c---chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCcc
Q 040741 335 EK---LDGVVVNGSMERRYIGNLNLSFAYV------E---GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDED 400 (457)
Q Consensus 335 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~ 400 (457)
+. .+.+..+ ...+.++.+.+... . ...+...+ +||.+.+..
T Consensus 884 ~l~~~~~~i~~v----rG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g--------------------- 938 (972)
T PRK06149 884 ALADRHPLIGAV----HGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPTG--------------------- 938 (972)
T ss_pred HHHHhCCCeEEE----eecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeecC---------------------
Confidence 51 3322111 12244444554210 0 11233333 576664321
Q ss_pred CCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 401 MAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 401 ~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
...+.|||.+...+|++|||++++++++++++
T Consensus 939 ~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 939 DHLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred CCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 11268999999999999999999999999864
No 357
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.74 E-value=2.2e-15 Score=155.33 Aligned_cols=323 Identities=12% Similarity=0.045 Sum_probs=208.4
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC
Q 040741 101 VAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA 180 (457)
Q Consensus 101 ~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~ 180 (457)
....++++..|+.+|++. ..++++|+|.+|.+++.+++ .+||.||+++.+|.|+..++... |+.++|++...
T Consensus 195 G~i~eAe~~aA~~fgAd~-tyfvvNGTS~~n~av~~a~~----~~Gd~VLvdRN~HKSv~~aLils---ga~PVYl~P~~ 266 (713)
T PRK15399 195 GPHLEAEEYIARTFGAEQ-SYIVTNGTSTSNKIVGMYAA----PAGSTLLIDRNCHKSLAHLLMMS---DVVPIWLKPTR 266 (713)
T ss_pred hHHHHHHHHHHHHhCCCc-EEEEeCChHHHHHHHHHHhc----CCCCEEEeecccHHHHHHHHHHc---CCeeEEecccc
Confidence 467788999999999864 47888888999999999999 89999999999999999987666 99999997652
Q ss_pred C-----CCCCH-----HHHHHhcCCC-----ceEEEEeccccccccccChHHHHHHHHhcCCcE-EEehhhhcC--CCcc
Q 040741 181 D-----GIVNL-----DELRAAIRPD-----TGLISVMAVNNEIGVIQPMEEIGQICKEFKIPF-HTDAAQALG--KIPV 242 (457)
Q Consensus 181 ~-----~~~d~-----~~le~~i~~~-----t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~l-i~D~a~~~g--~~~~ 242 (457)
+ |.++. +.++++|... ++.++++++ +..|.++++++|+++| |+.+ ++|+||+.- ..+.
T Consensus 267 n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~ 342 (713)
T PRK15399 267 NALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPI 342 (713)
T ss_pred cccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCcc
Confidence 2 24555 8888888643 256777776 5589999999999999 6766 699999731 1111
Q ss_pred --cCCCC----cccEE---Eecccc-ccCCCCceEEEEecCCC-ccccccccCCccccccccCCCChhHHHHHHHHHHHH
Q 040741 243 --DVEKW----NVSLM---SLSGHK-IYGPKGVGALYMRRRPR-IRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIA 311 (457)
Q Consensus 243 --~~~~~----~~Di~---~~s~~K-~~g~~G~G~l~~~~~~~-~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~ 311 (457)
+...+ +.|.+ +-|.|| +.+..-.+++-++...- +++...+. -+.+.+|+.+.++++..|...+
T Consensus 343 ~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~~~~n~a~~------m~~STSPsY~LmASLD~a~~~m 416 (713)
T PRK15399 343 YQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFM------MHTSTSPSYPIVASVETAAAML 416 (713)
T ss_pred cCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCCCHHHHHHHHH------HHcCCCcHHHHHHHHHHHHHHH
Confidence 11111 35666 889999 55555568887765311 11211111 1234578888999998888877
Q ss_pred HH-hhHHHHHHHHHHHHHHHHHHhhcCCC------eEEeCCCCCcccceE-------EEEEccccchH-HHhcccCeEec
Q 040741 312 KK-EMDYDHKRITALHDRLLNGIKEKLDG------VVVNGSMERRYIGNL-------NLSFAYVEGES-LLMGLKEVAVS 376 (457)
Q Consensus 312 ~~-~~~~~~~~~~~~~~~l~~~l~~~~~~------~~~~~~~~~~~~~~~-------~~~~~~~~~~~-~~~~l~~i~~~ 376 (457)
.. .-.++.++..+.+..+++.+.+ +.+ +.+.+++.-...... ...|++..... .++-++=....
T Consensus 417 ~~~~G~~l~~~~i~~a~~fR~~l~~-~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t 495 (713)
T PRK15399 417 RGNPGKRLINRSVERALHFRKEVQR-LREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILT 495 (713)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHh-ccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEEe
Confidence 64 4677888888888888888877 554 455442110000000 00111110000 11111111111
Q ss_pred ccCc-----cCCCC--CChhHHHHHcCCCccC-CCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHhcChhHHH
Q 040741 377 SGSA-----CTSAS--LEPSYVLRALGVDEDM-AHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLREMSPLYEM 442 (457)
Q Consensus 377 ~g~~-----~~~~~--~~~~~~l~~~g~~~~~-~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~~~~~~~~ 442 (457)
+|.. ...+. .+-...|+..|+..+. +...|-|-++...+++++++++++|.++-+...+-.|++++
T Consensus 496 ~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~~~L~~aL~~f~~~~d~~~~l~~~ 569 (713)
T PRK15399 496 PGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMGLLRGLTEFKRAYDLNLRVKNM 569 (713)
T ss_pred cCcccccccccCCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHHHHhhhcccchhhh
Confidence 1211 00000 0012235666776554 45678788888899999999999999886666666666655
No 358
>PRK06148 hypothetical protein; Provisional
Probab=99.73 E-value=2.2e-15 Score=164.93 Aligned_cols=339 Identities=13% Similarity=0.114 Sum_probs=206.4
Q ss_pred ccCCCcEEecCCCC----CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChH
Q 040741 53 RIAGRPLYLDMQAT----TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGAT 128 (457)
Q Consensus 53 ~~~~~~i~l~~~~~----~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T 128 (457)
....+.-|||+.+. +...|++.+++.+.+.....+ . .+ ..+...++.++|++.+..+.+.+.|++|||
T Consensus 619 ~D~dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~~~--~-----~~-~~~~~~~lAe~L~~~~p~~~~~v~f~nSGs 690 (1013)
T PRK06148 619 IDNRGRAYLDCFNNVCHVGHAHPRVVAAAARQAARLNTN--T-----RY-LHDAIVAYAERLTATLPDGLTVAFFVNSGS 690 (1013)
T ss_pred EECCCCEEEEcccChhhcCCCCHHHHHHHHHHHhhcCCc--C-----Cc-CCHHHHHHHHHHHHhCCCCcCEEEEeCCcH
Confidence 33455568887443 367899999999998764211 1 11 125667788888888764445699999999
Q ss_pred HHHHHHHHHhhhhhcCCCCEEEE-cCCCCcchHHHHHHHH----h-cC----cEEEEEeCCC--CCCC---C-------H
Q 040741 129 ESNNVSIKGVMHFYKDKKRHVIT-TQTEHKCVLDSCRHLQ----Q-EG----FEITYLPVGA--DGIV---N-------L 186 (457)
Q Consensus 129 ~a~~~al~~~~~~~~~~g~~vi~-~~~~h~~~~~~~~~~~----~-~G----~~v~~v~~~~--~~~~---d-------~ 186 (457)
+|++.|++....+. + +.+||+ ....|.....+..... . .+ ..+..++... .... | .
T Consensus 691 EA~e~AlklAr~~t-G-r~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 768 (1013)
T PRK06148 691 EANSLALRLARAHT-G-QRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFA 768 (1013)
T ss_pred HHHHHHHHHHHHhc-C-CCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHH
Confidence 99999999877542 3 344554 4555666554432210 0 01 1121122110 0001 1 1
Q ss_pred HHHHHhcC------CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc---ccCC--CCccc
Q 040741 187 DELRAAIR------PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP---VDVE--KWNVS 250 (457)
Q Consensus 187 ~~le~~i~------~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~---~~~~--~~~~D 250 (457)
+.++++++ .+...|+++.+....|.+.| ++++.++|++||+++|.|+++. +|... +... ...+|
T Consensus 769 ~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PD 848 (1013)
T PRK06148 769 ESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPD 848 (1013)
T ss_pred HHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcc
Confidence 34555443 45788999999888888877 9999999999999999999984 54321 1122 23579
Q ss_pred EEEecccc-ccCCCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 040741 251 LMSLSGHK-IYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRL 329 (457)
Q Consensus 251 i~~~s~~K-~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l 329 (457)
+++++ | +.|...+|+++++++..+.+.+.. .. +.....++..+++..+.++.+++ +...++.+++.+++
T Consensus 849 ivt~g--K~lggG~Plgav~~~~ei~~~~~~g~-----~~-~~Tf~gnpla~aaa~a~L~~i~~--e~l~~~~~~~G~~l 918 (1013)
T PRK06148 849 IVTMG--KPIGNGHPMGAVVTTREIADSFDNGM-----EY-FNTFGGNPVSCAIGLAVLDIIED--EDLQRNALEIGNYL 918 (1013)
T ss_pred eeeec--ccccCCcceEEEEEcHHHHhhccCCC-----cc-ccCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHH
Confidence 98876 9 444345899999877655543211 00 11123466667777778888876 45666777777777
Q ss_pred HHHHhhcCCCeEEeCCCCCcccceEEEEEccc-----cc----hHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCC
Q 040741 330 LNGIKEKLDGVVVNGSMERRYIGNLNLSFAYV-----EG----ESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVD 398 (457)
Q Consensus 330 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~ 398 (457)
++.|++......++++ ....+.++.+.+... .. ..+...+ +||.+.+..
T Consensus 919 ~~~L~~l~~~~~~i~~-VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g------------------- 978 (1013)
T PRK06148 919 LAGLRELQDRFDIIGD-VRGMGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTEG------------------- 978 (1013)
T ss_pred HHHHHHHHHhCCCceE-EeeeceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEeccC-------------------
Confidence 7776551011111111 111244444444311 01 1233333 577664311
Q ss_pred ccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 399 EDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 399 ~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
...+.|||.++..+|++|||+++++++++++++
T Consensus 979 --~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 979 --PHDNVLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred --CCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 112789999999999999999999999999865
No 359
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.73 E-value=1.8e-15 Score=146.29 Aligned_cols=346 Identities=17% Similarity=0.162 Sum_probs=209.5
Q ss_pred CCcEEecCCCCC-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHH
Q 040741 56 GRPLYLDMQATT-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVS 134 (457)
Q Consensus 56 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~a 134 (457)
.-+|.|-.++.+ .++++++++|.. |+ . .|..++.+.++++.+++++|.+. +++|..|+.+.+++
T Consensus 41 dV~IDLrSDTgT~apS~~m~aAM~~------GD-----D--~Y~gdpSv~~Lee~vael~G~E~--alpthqGRgaE~Il 105 (467)
T TIGR02617 41 DVFIDLLTDSGTGAVTQSMQAAMMR------GD-----E--AYSGSRSYYALAESVKNIFGYQY--TIPTHQGRGAEQIY 105 (467)
T ss_pred CeEEECccCCCCCCCCHHHHHHHHc------CC-----c--ccccCchHHHHHHHHHHHhCCce--EEECCCCchHHHHH
Confidence 344666677777 589999999986 11 1 11223578899999999999986 99999999999999
Q ss_pred HHHhhhhhcCCCCEEEEcCC----CCcchHHHH-HHHHhcCcEEEEEeC----------CCCCCCCHHHHHHhcCC----
Q 040741 135 IKGVMHFYKDKKRHVITTQT----EHKCVLDSC-RHLQQEGFEITYLPV----------GADGIVNLDELRAAIRP---- 195 (457)
Q Consensus 135 l~~~~~~~~~~g~~vi~~~~----~h~~~~~~~-~~~~~~G~~v~~v~~----------~~~~~~d~~~le~~i~~---- 195 (457)
++.++. .+|+.+++... .|....+.. -.....|+.+..++. +.+|.+|+++|+++|++
T Consensus 106 ~~~~~~---~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~ 182 (467)
T TIGR02617 106 IPVLIK---KREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPN 182 (467)
T ss_pred HHhhcc---cccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCC
Confidence 999883 37787776554 344444422 233445887776532 24689999999999984
Q ss_pred CceEEEEeccccc-cccccC---hHHHHHHHHhcCCcEEEehhhhcC-C----------CcccCCC------CcccEEEe
Q 040741 196 DTGLISVMAVNNE-IGVIQP---MEEIGQICKEFKIPFHTDAAQALG-K----------IPVDVEK------WNVSLMSL 254 (457)
Q Consensus 196 ~t~li~i~~~~~~-~G~~~~---l~~i~~l~~~~~v~li~D~a~~~g-~----------~~~~~~~------~~~Di~~~ 254 (457)
+...+.....+|. .|.+.| ++++.++|++||+.+|+|+|.-+- + ...++.+ ..+|.+++
T Consensus 183 ~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~ 262 (467)
T TIGR02617 183 NVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAM 262 (467)
T ss_pred CceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEE
Confidence 2334444444554 466777 668888999999999999987542 2 2222221 25899999
Q ss_pred cccc-ccCCCCceEEEEecCCC----ccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 040741 255 SGHK-IYGPKGVGALYMRRRPR----IRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRL 329 (457)
Q Consensus 255 s~~K-~~g~~G~G~l~~~~~~~----~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l 329 (457)
|++| ++.|.| |+++++++.. .+++.... -.+....+|..+...+.++...+....+ +...+.--...+||
T Consensus 263 slsKglgApvG-g~Lag~d~~~~~l~~~~~~~~i--~~EGf~tYGGlagrd~ea~a~Gl~e~~~--~~yl~~ri~qv~yl 337 (467)
T TIGR02617 263 SAKKDAMVPMG-GLLCFKDDSFFDVYTECRTLCV--VQEGFPTYGGLEGGAMERLAVGLYDGMN--LDWLAYRINQVQYL 337 (467)
T ss_pred EcCCCCCCccc-ceEEecchhHHHHHHHHHhhcc--cccCCcCcCchhHHHHHHHHhhhhhccc--HHHHHHHHHHHHHH
Confidence 9999 555766 8888887511 12222111 1112245566666677777655654433 33333444455677
Q ss_pred HHHHhhcCCCeEEeCCCCCcccceEEEE----Eccc-----cchHHHhcc---cCeE-ecccCccCCCCCChhHHHHHcC
Q 040741 330 LNGIKEKLDGVVVNGSMERRYIGNLNLS----FAYV-----EGESLLMGL---KEVA-VSSGSACTSASLEPSYVLRALG 396 (457)
Q Consensus 330 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----~~~~~~~~l---~~i~-~~~g~~~~~~~~~~~~~l~~~g 396 (457)
.+.|.+ -|+.+.. . + +..+.+. ++.+ .+..+...| .||- +.-|+.......+ -|
T Consensus 338 ~~~L~~--~Gvpi~~-~-G--ghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~-------~~ 404 (467)
T TIGR02617 338 VNGLEE--IGVVCQQ-A-G--GHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPK-------TG 404 (467)
T ss_pred HHHHHh--CCCcEEe-c-C--ccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCC-------CC
Confidence 777777 4665543 1 2 1222221 1222 234454444 2332 1223221100000 00
Q ss_pred CCccCCCCeEEEecCCC-CCHHHHHHHHHHHHHHHHHHHhcC
Q 040741 397 VDEDMAHTSIRFGIGRF-TTEAEVDRAIELTVKQVEKLREMS 437 (457)
Q Consensus 397 ~~~~~~~~~iRi~~~~~-~t~edid~~~~~l~~~~~~~~~~~ 437 (457)
......-..+|+++.+- -|.+++|+++++++...++-....
T Consensus 405 ~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~~~~i~ 446 (467)
T TIGR02617 405 KQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAPNIK 446 (467)
T ss_pred ccCCCccceeeeccccccccHhHHHHHHHHHHHHHhhhhhcC
Confidence 00011136899998874 478999999999999887654433
No 360
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.73 E-value=8.2e-16 Score=158.51 Aligned_cols=321 Identities=11% Similarity=0.009 Sum_probs=206.4
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC
Q 040741 101 VAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA 180 (457)
Q Consensus 101 ~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~ 180 (457)
....++++..|+.+|++. ..++++|+|.+|.+++.+++ .+||.||+++.+|.|+..++... |+.++|++...
T Consensus 195 G~i~eAe~~AA~~fgAd~-tyfvvNGTS~~n~av~~a~~----~~Gd~VLvdRN~HKSv~haLils---ga~PVYl~P~r 266 (714)
T PRK15400 195 GPHKEAEEYIARVFNADR-SYMVTNGTSTANKIVGMYSA----PAGSTVLIDRNCHKSLTHLMMMS---DVTPIYFRPTR 266 (714)
T ss_pred hHHHHHHHHHHHHhCCCc-EEEEeCchHHHHHHHHHHhc----CCCCEEEeecccHHHHHHHHHHc---CCeEEEecccc
Confidence 467889999999999874 47788888999999999998 89999999999999999987666 99999997653
Q ss_pred C-----CCCC-----HHHHHHhcCCCc--e---EEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCC--Ccc-
Q 040741 181 D-----GIVN-----LDELRAAIRPDT--G---LISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGK--IPV- 242 (457)
Q Consensus 181 ~-----~~~d-----~~~le~~i~~~t--~---li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~--~~~- 242 (457)
+ +.++ .+.++++|...+ + .++++++ +..|.+++++.|+++|+.++ |++|+||+.-. .+.
T Consensus 267 n~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~ 343 (714)
T PRK15400 267 NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIY 343 (714)
T ss_pred cccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECC-CCccEecCHHHHHHHhCCCC--EEEEccchhhhccCccc
Confidence 2 2345 789999886432 2 5777766 55899999999999999887 79999997421 111
Q ss_pred -cCC--CCcc---c--EEEecccc-ccCCCCceEEEEecCCCc--cccccccCCccccccccCCCChhHHHHHHHHHHHH
Q 040741 243 -DVE--KWNV---S--LMSLSGHK-IYGPKGVGALYMRRRPRI--RVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIA 311 (457)
Q Consensus 243 -~~~--~~~~---D--i~~~s~~K-~~g~~G~G~l~~~~~~~~--~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~ 311 (457)
+.. ..+. | +++-|.|| +.|..-.+++-++.. ++ ++...+. -+.+.+|+.+.++++..|...+
T Consensus 344 ~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~-vd~~~~n~a~~------m~~STSPsY~l~ASLD~a~~~m 416 (714)
T PRK15400 344 EGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD-VNEETFNEAYM------MHTTTSPHYGIVASTETAAAMM 416 (714)
T ss_pred CCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCC-CCHHHHHHHHH------HHcCCCcHHHHHHHHHHHHHHH
Confidence 011 1233 5 89999999 455554566666543 22 1211111 0234578888999998888877
Q ss_pred HH-hhHHHHHHHHHHHHHHHHHHhhcCCC------eEEeCCCCCcccceE-------EEEEccccch-HHHhcccCeEec
Q 040741 312 KK-EMDYDHKRITALHDRLLNGIKEKLDG------VVVNGSMERRYIGNL-------NLSFAYVEGE-SLLMGLKEVAVS 376 (457)
Q Consensus 312 ~~-~~~~~~~~~~~~~~~l~~~l~~~~~~------~~~~~~~~~~~~~~~-------~~~~~~~~~~-~~~~~l~~i~~~ 376 (457)
.. .-.+..++..+.+..+++.|.+ +++ +.+.++..-.-..+. ...|++.... -.++-++=....
T Consensus 417 ~~~~G~~l~~~~i~~a~~~R~~l~~-~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~t 495 (714)
T PRK15400 417 KGNAGKRLINGSIERAIKFRKEIKR-LRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLT 495 (714)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHh-CCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCceEEEEe
Confidence 64 4678888888889999999988 666 555542210000000 0011111000 011111111111
Q ss_pred ccCccC-----CCCC--ChhHHHHHcCCCccC-CCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHhcChhH
Q 040741 377 SGSACT-----SASL--EPSYVLRALGVDEDM-AHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLREMSPLY 440 (457)
Q Consensus 377 ~g~~~~-----~~~~--~~~~~l~~~g~~~~~-~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~~~~~~ 440 (457)
+|.... .+.. .-...|+..|+..+. ....|-|-++...|+++++.++++|.++-+...+-.|++
T Consensus 496 pgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~~iLfl~s~g~t~~~~~~L~~aL~~f~~~~d~n~~l~ 567 (714)
T PRK15400 496 PGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSLLRALTDFKRAFDLNLRVK 567 (714)
T ss_pred CCCCCCccccccCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHHHHhhccccchh
Confidence 121100 0000 011234566765554 456788888889999999999999998755544333433
No 361
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.73 E-value=8.5e-15 Score=147.67 Aligned_cols=334 Identities=13% Similarity=0.092 Sum_probs=196.4
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCC---CcEEEeC
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASP---KEIIFTS 125 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~---~~i~~t~ 125 (457)
..+.-|||+.+. +..+|++.+++.+.+.... +.. ... ...+...++.++|.+.++... ..++|++
T Consensus 55 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~--~~~---~~~-~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~ 128 (459)
T PRK06931 55 VEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGL--PLH---TLD-LTTPLKDAFSEYLLSLLPGQGKEYCLQFTGP 128 (459)
T ss_pred CCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhc--ccc---ccc-cCCHHHHHHHHHHHHhCCCccccceEEEeCC
Confidence 345568887544 3578999999999886421 000 000 112556677788888875321 1245668
Q ss_pred ChHHHHHHHHHHhhhhhcCCCCEEEEcCC-CCcchHHHHHHHHhc----C-----cEEEEEeCCCCC--------CCCHH
Q 040741 126 GATESNNVSIKGVMHFYKDKKRHVITTQT-EHKCVLDSCRHLQQE----G-----FEITYLPVGADG--------IVNLD 187 (457)
Q Consensus 126 g~T~a~~~al~~~~~~~~~~g~~vi~~~~-~h~~~~~~~~~~~~~----G-----~~v~~v~~~~~~--------~~d~~ 187 (457)
|||+|++.|++....+ ..+++||.... .|.....+....... + ..+..++.+... .-+.+
T Consensus 129 SGsEAve~AlklAr~~--tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (459)
T PRK06931 129 SGADAVEAAIKLAKTY--TGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVK 206 (459)
T ss_pred CcHHHHHHHHHHHHHh--cCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHH
Confidence 9999999999987754 33456665554 555554444322110 0 123333332110 01223
Q ss_pred HH----HHhcC------CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc--cc--CCCCc
Q 040741 188 EL----RAAIR------PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP--VD--VEKWN 248 (457)
Q Consensus 188 ~l----e~~i~------~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~--~~--~~~~~ 248 (457)
.+ ++.++ ++...|+++.+....|.+.| ++++.++|++||+++|+|+++. +|... +. .....
T Consensus 207 ~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~ 286 (459)
T PRK06931 207 ALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIE 286 (459)
T ss_pred HHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCC
Confidence 22 33332 34788899999888888765 8999999999999999999986 43221 11 12235
Q ss_pred ccEEEecccc-ccCCCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 040741 249 VSLMSLSGHK-IYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHD 327 (457)
Q Consensus 249 ~Di~~~s~~K-~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~ 327 (457)
+|+++++ | +.|.-.+|+++.+++ .+.+.+...+ .. ...++..+++..+.++.+++ +...++.+++.+
T Consensus 287 PDivt~g--K~l~gG~Pi~av~~~~~-~~~~~~~~~~------~T-~~gnpla~aaala~L~~l~~--~~l~~~~~~~G~ 354 (459)
T PRK06931 287 PDIIVMS--KAVGGGLPLAVLGIKKE-FDAWQPGGHT------GT-FRGNQLAMATGLTTLKILKE--ENLAQNAAERGE 354 (459)
T ss_pred CCEEEec--ccccCCcceeeeeeHHH-HhhccCCCCC------CC-CCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHH
Confidence 8999887 9 443334788887754 2333221111 11 14566677777778887766 345566666666
Q ss_pred HHHHHHhhc---CCCeEEeCCCCCcccceEEEEEcccc-----------ch----HHHhcc--cCeEecccCccCCCCCC
Q 040741 328 RLLNGIKEK---LDGVVVNGSMERRYIGNLNLSFAYVE-----------GE----SLLMGL--KEVAVSSGSACTSASLE 387 (457)
Q Consensus 328 ~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~----~~~~~l--~~i~~~~g~~~~~~~~~ 387 (457)
++++.|++. .|. +++ ....+.++.+.+.... .. .+...+ +|+.+.+..
T Consensus 355 ~l~~~L~~l~~~~~~---i~~-vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~-------- 422 (459)
T PRK06931 355 WLKAQLAELQKRYPC---IGN-VRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGG-------- 422 (459)
T ss_pred HHHHHHHHHHHhCCC---eEe-EecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecC--------
Confidence 666666551 332 111 1122444445552110 01 122222 466554211
Q ss_pred hhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 388 PSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 388 ~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
...+.+||.++..+|++|||+++++++++++++
T Consensus 423 -------------~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 455 (459)
T PRK06931 423 -------------RNGNVVRLLPPLLITQAECEEFIDRFEQALLAA 455 (459)
T ss_pred -------------CCCCEEEEECCCCcCHHHHHHHHHHHHHHHHHH
Confidence 112689999999999999999999999999865
No 362
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.72 E-value=3.8e-15 Score=149.62 Aligned_cols=336 Identities=16% Similarity=0.129 Sum_probs=196.1
Q ss_pred CCcEEecCCCC------CCCCHHHHH--HHHHHHhhccC-CCCCCccchhhhHHHHHHHHHHHHHHHhC-CCCCcEEEeC
Q 040741 56 GRPLYLDMQAT------TPVDPRVLD--AMLPFYLSRYG-NPHSRTHLFGWESEVAVETARSQIADLIG-ASPKEIIFTS 125 (457)
Q Consensus 56 ~~~i~l~~~~~------~~~~~~v~~--a~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~la~~~g-~~~~~i~~t~ 125 (457)
.+.-|||+.+. +...|++.+ ++.+.+....- .+... ... .+...++.+.|+++.+ -..+.++|++
T Consensus 43 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~----~~~-~~~~~~la~~l~~~~~p~~~~~v~f~~ 117 (443)
T PRK08297 43 TGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNS----DVY-TVEMARFVDTFARVLGDPELPHLFFVD 117 (443)
T ss_pred CCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccC----CcC-CHHHHHHHHHHHhhcCCCCCCEEEEeC
Confidence 34458886543 357899999 99988865321 11110 111 2455667777888762 2235699999
Q ss_pred ChHHHHHHHHHHhhhhhc------C----CCCEEEEcCCC-CcchHHHHHHHHhc-----CcEE---EEEeCCC-----C
Q 040741 126 GATESNNVSIKGVMHFYK------D----KKRHVITTQTE-HKCVLDSCRHLQQE-----GFEI---TYLPVGA-----D 181 (457)
Q Consensus 126 g~T~a~~~al~~~~~~~~------~----~g~~vi~~~~~-h~~~~~~~~~~~~~-----G~~v---~~v~~~~-----~ 181 (457)
||++|++.|++....+.. . .+.+||..... |.....+....... .... ..++... .
T Consensus 118 SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (443)
T PRK08297 118 GGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLP 197 (443)
T ss_pred chHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCc
Confidence 999999999998765421 1 13567766654 54444443322100 0000 0011110 0
Q ss_pred C----------CCCHHHHHHhcC---CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCCc--
Q 040741 182 G----------IVNLDELRAAIR---PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKIP-- 241 (457)
Q Consensus 182 ~----------~~d~~~le~~i~---~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~~-- 241 (457)
+ .-|++++++.+. ++...|+++.+....|.+.| +++|.++|++||+++|+|+++. +|...
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~ 277 (443)
T PRK08297 198 GEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTA 277 (443)
T ss_pred ccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchH
Confidence 0 013455666664 56789999999988888755 8999999999999999999985 44321
Q ss_pred c--cCCCCcccEEEeccccccCCCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHH
Q 040741 242 V--DVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDH 319 (457)
Q Consensus 242 ~--~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~ 319 (457)
+ ......+|+++++ |.++ +|.++++++..+........... . ......++..+++..++++.+.+ +...
T Consensus 278 ~a~~~~gv~PDiv~~g--K~l~---~~a~l~~~~i~~~~~~~~~~~~~-~-~~T~~gnpl~~aaa~a~L~~l~~--~~l~ 348 (443)
T PRK08297 278 WAYQQLGVRPDIVAFG--KKTQ---VCGIMAGRRVDEVEDNVFAVSSR-I-NSTWGGNLVDMVRARRILEVIEE--DGLV 348 (443)
T ss_pred HHHHhcCCCCCEEEec--cccc---ccceecchHHHHhhhhhccCccc-c-CCCCCccHHHHHHHHHHHHHHHh--cCHH
Confidence 1 1112258999765 9653 23333443311111011100000 0 01113456667777777877765 3566
Q ss_pred HHHHHHHHHHHHHHhhc---CCCe--EEeCCCCCcccceEEEEEcccc-chHHHhcc--cCeEecccCccCCCCCChhHH
Q 040741 320 KRITALHDRLLNGIKEK---LDGV--VVNGSMERRYIGNLNLSFAYVE-GESLLMGL--KEVAVSSGSACTSASLEPSYV 391 (457)
Q Consensus 320 ~~~~~~~~~l~~~l~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~ 391 (457)
++.+++.+++++.|++. .+.+ .+.+ .+.++.+.+.... ...+...+ +|+.+.+..
T Consensus 349 ~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg-----~G~~~~i~~~~~~~~~~~~~~l~~~Gvl~~~~~------------ 411 (443)
T PRK08297 349 ENAARQGEYLLARLEELAAEFPAVVSNVRG-----RGLMCAFDLPTTADRDEVIRRLWEEGVLVLPCG------------ 411 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCcceeeec-----cceEEEEEecCHHHHHHHHHHHHHCCEEEecCC------------
Confidence 66777777777766551 3322 2222 2455555664221 22344444 577764321
Q ss_pred HHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 392 LRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 392 l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
...+||.++..+|++|||+++++++++++++
T Consensus 412 -----------~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 412 -----------ERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred -----------CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 1579999999999999999999999998765
No 363
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.72 E-value=6.9e-15 Score=143.15 Aligned_cols=291 Identities=19% Similarity=0.206 Sum_probs=178.5
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHH-HHHhcCcEEE
Q 040741 96 GWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCR-HLQQEGFEIT 174 (457)
Q Consensus 96 ~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~G~~v~ 174 (457)
..+..+..-+++.++++++|.+..+.-+-.++|.+-+.++++... .++++++|+++...|+.+...++ ++...|++++
T Consensus 105 sQG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~-~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv 183 (429)
T PF02347_consen 105 SQGRLQALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRA-TKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIV 183 (429)
T ss_dssp BHHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHH-HTT---EEEEETTS-CHHHHHHHHHCCHCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHh-cccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEE
Confidence 455668888999999999999876678888999888877776653 22445799999999999988766 3456799999
Q ss_pred EEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhh--cCCCcccCCCCcccEE
Q 040741 175 YLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQA--LGKIPVDVEKWNVSLM 252 (457)
Q Consensus 175 ~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~--~g~~~~~~~~~~~Di~ 252 (457)
.++.+.++..| ++++..|++..|++ .|.+.++++|.+++|++|.++++ ++.. ++.+ ....++|+|++
T Consensus 184 ~~~~~~~~~~d--------~~~~a~v~vq~Pn~-~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL~~l-~~Pge~GADI~ 252 (429)
T PF02347_consen 184 EVPLDEDGTTD--------DDDTAAVMVQNPNT-FGVFEDIKEIADIAHAAGALVIV-GADPNALGGL-KSPGEYGADIV 252 (429)
T ss_dssp EE-BBTTCSB---------STTEEEEEEESS-T-TSB--THHHHHHHHHHTT-EEEE-CGGCCGCCTC---GGGGT-SEE
T ss_pred EecccccCCcc--------ccCeEEEEeecCCC-CceEeeHHHHHHHHHHcCCEEEE-ecCHHHHhCc-CChhhcCccEE
Confidence 99988887776 78899999999964 89999999999999999999998 6553 2322 23457799999
Q ss_pred Eecccc-c-----cCCCCceEEEEecCCCccccccccC------Cc-----------cccccccCCCChh---HH---HH
Q 040741 253 SLSGHK-I-----YGPKGVGALYMRRRPRIRVEPLING------GG-----------QERGIRSGTLPTP---LI---VG 303 (457)
Q Consensus 253 ~~s~~K-~-----~g~~G~G~l~~~~~~~~~~~~~~~~------~~-----------~~~~~~~~t~~~~---~~---~a 303 (457)
+++ +| + ||.++.|++.+++++..++.-.+.| |. |+-+....|.|+. .+ .+
T Consensus 253 vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a 331 (429)
T PF02347_consen 253 VGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAA 331 (429)
T ss_dssp EEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHH
T ss_pred eeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHH
Confidence 777 66 3 4566799999999866665433332 10 1111122344332 22 22
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHHhcc--cCeEecccCcc
Q 040741 304 FGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSAC 381 (457)
Q Consensus 304 l~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~ 381 (457)
...+..+..+++.++.++...++.|+.+.|.+ +.++.+.. ..+...+....+.....+++... .|+...
T Consensus 332 ~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~-~~~~~~~~---~~f~e~v~~~~~~~~~~~l~~~~~~~gl~~~----- 402 (429)
T PF02347_consen 332 AIYLAYLGPEGLREIAERIHLNAHYLAERLKK-IYGLPFDN---PFFFEFVVVFSKDKEVEELLKRGIEGGLNLR----- 402 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-TTBECSSS---SSBSSEEEEESS-HHHHHHHHTT----EEEG-----
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH-hcCcccCC---CCceeeeeecCCcHHHHHHHHHHHhcCCCcc-----
Confidence 22233334567999999999999999999999 54443322 22233332222221222333333 232221
Q ss_pred CCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHH
Q 040741 382 TSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELT 426 (457)
Q Consensus 382 ~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l 426 (457)
....+.+-+++...+|+||||.+++++
T Consensus 403 ------------------~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 403 ------------------YPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp ------------------GG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred ------------------ccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 011258889999999999999999875
No 364
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.71 E-value=2.7e-14 Score=143.30 Aligned_cols=332 Identities=16% Similarity=0.127 Sum_probs=188.1
Q ss_pred CcEEecCCCC------CCCCHHHH--HHHHHHHhhcc-CCCCCCccchhhhHHHHHHHHHHHHHHHhC-CCCCcEEEeCC
Q 040741 57 RPLYLDMQAT------TPVDPRVL--DAMLPFYLSRY-GNPHSRTHLFGWESEVAVETARSQIADLIG-ASPKEIIFTSG 126 (457)
Q Consensus 57 ~~i~l~~~~~------~~~~~~v~--~a~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~la~~~g-~~~~~i~~t~g 126 (457)
+.-|||+.+. +...|++. +++.+.+.+.. ..+.. .. ...+...++.++|+++.+ -..+.++|++|
T Consensus 37 G~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~-~~----~~~~~~~~l~~~l~~~~~~~~~~~v~f~~s 111 (431)
T TIGR03251 37 GRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSN-SD----VYTVAMARFVDTFARVLGDPALPHLFFIEG 111 (431)
T ss_pred CCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhccccc-CC----CCCHHHHHHHHHHHHhcCCCCcCEEEEeCC
Confidence 4457776443 25678898 89888887532 11111 00 112455566667777752 22356999999
Q ss_pred hHHHHHHHHHHhhhhhcC-------C---CCEEEEcCCC-CcchHHHHHHHHhcCcEEE--------EEeCC-------C
Q 040741 127 ATESNNVSIKGVMHFYKD-------K---KRHVITTQTE-HKCVLDSCRHLQQEGFEIT--------YLPVG-------A 180 (457)
Q Consensus 127 ~T~a~~~al~~~~~~~~~-------~---g~~vi~~~~~-h~~~~~~~~~~~~~G~~v~--------~v~~~-------~ 180 (457)
||+|++.|++....+..+ + +.+|+..... |.....+.......+..-. .++.. .
T Consensus 112 GsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 191 (431)
T TIGR03251 112 GALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDA 191 (431)
T ss_pred cHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccc
Confidence 999999999988755311 1 3567766654 5554444332211001100 01111 0
Q ss_pred CC--------CCCHHHHHHhcC---CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCC----
Q 040741 181 DG--------IVNLDELRAAIR---PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKI---- 240 (457)
Q Consensus 181 ~~--------~~d~~~le~~i~---~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~---- 240 (457)
.. .-+++++++.+. +++..|+++.+....|.+.| +++|.++|++||+++|+|++++ +|..
T Consensus 192 ~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~ 271 (431)
T TIGR03251 192 PNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAW 271 (431)
T ss_pred cccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHH
Confidence 00 013455566663 57889999999988898764 8999999999999999999987 4432
Q ss_pred cccCCCCcccEEEeccccccCCCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHH
Q 040741 241 PVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHK 320 (457)
Q Consensus 241 ~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~ 320 (457)
..+.....+|+++++ |.+ | ..|++. +++..+........... . ....+.++..+++..++++.+.++ ...+
T Consensus 272 a~~~~gv~PDi~~~g--K~~-~-~~g~~~-~~~i~~~~~~~~~~~~~-~-~~T~~gnpl~~aaa~a~L~~l~~~--~l~~ 342 (431)
T TIGR03251 272 AYQQLGVQPDIVAFG--KKT-Q-VCGIMA-GRRVDEVADNVFAVPSR-L-NSTWGGNLVDMVRATRILEIIEEE--RLVD 342 (431)
T ss_pred HHHhcCCCCCEEEec--ccC-c-cceEEe-cchHHHhhhhcccCccc-c-CCCCCCCHHHHHHHHHHHHHHHhc--CHHH
Confidence 111223358999765 854 3 235554 33211111101100000 0 011235667777777888887652 3344
Q ss_pred HHHHHHHHHHHHHhh---cCCCeEEeCCCCCcccceEEEEEcccc-chHHHhcc--cCeEecccCccCCCCCChhHHHHH
Q 040741 321 RITALHDRLLNGIKE---KLDGVVVNGSMERRYIGNLNLSFAYVE-GESLLMGL--KEVAVSSGSACTSASLEPSYVLRA 394 (457)
Q Consensus 321 ~~~~~~~~l~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~ 394 (457)
+.+++.+++.+.|++ ..+++. .+. ...+.++.+.+...+ ...+...+ +||.+.+..
T Consensus 343 ~~~~~g~~l~~~L~~l~~~~~~~i--~~v-rg~G~~~~i~~~~~~~~~~~~~~l~~~Gvl~~~~g--------------- 404 (431)
T TIGR03251 343 NARVQGAHLLARLHELAAEFPHLV--SNP-RGRGLMCAFDLPSTADRDEVIRQLYREGVLLLGCG--------------- 404 (431)
T ss_pred HHHHHHHHHHHHHHHHHHhCccce--ecc-cccceeEEEEeCCHHHHHHHHHHHHhCCeEEecCC---------------
Confidence 445555555544433 133232 211 222455556664321 12344444 577664321
Q ss_pred cCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHH
Q 040741 395 LGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVK 428 (457)
Q Consensus 395 ~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~ 428 (457)
...+||+++..+|++|||++++++.+
T Consensus 405 --------~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 405 --------ERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred --------CCeEEEECCccCCHHHHHHHHHHHHh
Confidence 16799999999999999999999876
No 365
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.69 E-value=7.3e-15 Score=136.79 Aligned_cols=336 Identities=14% Similarity=0.089 Sum_probs=205.9
Q ss_pred eecccccCCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcE
Q 040741 48 TLKGVRIAGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEI 121 (457)
Q Consensus 48 ~~~~~~~~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i 121 (457)
.++.+....+.-|||+-+. +.+.|++.+++.+.+...|-.. .++. .+...++.+.|++.+..+-+.+
T Consensus 40 ~~~ylyDe~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t------~~~~-~~pi~~~Ae~L~s~~P~~l~~v 112 (442)
T KOG1404|consen 40 EGQYLYDEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTT------SGYL-NPPIHDLAEALVSKLPGDLKVV 112 (442)
T ss_pred ceEEEEcCCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEee------cccc-CCcHHHHHHHHHHhCCCCceEE
Confidence 3444555667778887653 3688999999999986654221 1222 2466667777777776666669
Q ss_pred EEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEE------------eCC--CC----CC
Q 040741 122 IFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYL------------PVG--AD----GI 183 (457)
Q Consensus 122 ~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v------------~~~--~~----~~ 183 (457)
+|++||++||+++++-...+. +.-+.|-..+..|.+...++... |.....- ..+ .. +.
T Consensus 113 fF~nsGsEANelal~mar~Yt-~~~diIa~r~~YHG~t~~t~glt---~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~ 188 (442)
T KOG1404|consen 113 FFVNSGSEANELALKMARLYT-GNLDIIARRNSYHGNTLYTLGLT---GLSPWKQNFPGVASGVHHTMNPDPYRGIFGGS 188 (442)
T ss_pred EEecCCchHHHHHHHHHHHhc-CCceEEEeeccccCCchhhcccc---cCCcccccCCCCCCcccccCCCCcccccCCCC
Confidence 999999999999999766543 44455556666777776654433 2211111 000 00 00
Q ss_pred -----C--CHHHHHHhcC----CCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhhc-CCC--cccCC
Q 040741 184 -----V--NLDELRAAIR----PDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQAL-GKI--PVDVE 245 (457)
Q Consensus 184 -----~--d~~~le~~i~----~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~~-g~~--~~~~~ 245 (457)
- -.++++..|- +..+.++++.++.-.|.+.+ +++..++|+++|.++|.|++++. |.. -..+.
T Consensus 189 ~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe 268 (442)
T KOG1404|consen 189 NEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFE 268 (442)
T ss_pred chhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccccccccc
Confidence 0 0133444432 23467778888887888865 89999999999999999999974 322 12222
Q ss_pred CC--cccEEEecccc-ccCCCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHH
Q 040741 246 KW--NVSLMSLSGHK-IYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRI 322 (457)
Q Consensus 246 ~~--~~Di~~~s~~K-~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~ 322 (457)
.. -+||++.+ | +.+...+|+++++++....+......+ ..++.. +...++..+.++.+++ +++.++.
T Consensus 269 ~h~v~PDIvTmA--KgiGnG~Pl~AVvtt~EIa~v~~~~~~~f-----nTyggn-P~a~avg~aVL~Vike--e~LqE~a 338 (442)
T KOG1404|consen 269 SHGVVPDIVTMA--KGIGNGFPLGAVVTTPEIADVLNQKSSHF-----NTYGGN-PVACAVGLAVLKVIKE--ENLQENA 338 (442)
T ss_pred ccCCCccHHHHH--hhccCCCcceeeecCHHHHHHHHhccccc-----cccCCC-chhHHHHHHHHHHHHH--HhHHHHH
Confidence 22 36877666 9 444456999999987555444333211 223333 4444444467887776 7888889
Q ss_pred HHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEcccc----------chHHHhcc--cCeEecccCccCCCCCChhH
Q 040741 323 TALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVE----------GESLLMGL--KEVAVSSGSACTSASLEPSY 390 (457)
Q Consensus 323 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l--~~i~~~~g~~~~~~~~~~~~ 390 (457)
.+...++++.|.+......++++. ...+-++-+.+-... ...+.+.. .|+.+--|.
T Consensus 339 a~vG~yl~~~l~~l~d~h~iIGdV-RG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~----------- 406 (442)
T KOG1404|consen 339 AEVGSYLLEKLAALKDKHPIIGDV-RGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGG----------- 406 (442)
T ss_pred HHHHHHHHHHHHHHhhcCCceeec-ccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeeccc-----------
Confidence 999999999988733345556542 222333333332111 11222222 255542221
Q ss_pred HHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHH
Q 040741 391 VLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELT 426 (457)
Q Consensus 391 ~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l 426 (457)
...+.+||.++...|+||||.+++..
T Consensus 407 ----------i~G~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 407 ----------IHGNVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred ----------ccceEEEecCCeeccHHHHHHHHHHH
Confidence 22369999999999999998777765
No 366
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.66 E-value=2.2e-15 Score=132.65 Aligned_cols=285 Identities=15% Similarity=0.077 Sum_probs=193.8
Q ss_pred HHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCC-CEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCC
Q 040741 105 TARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKK-RHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGI 183 (457)
Q Consensus 105 ~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g-~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~ 183 (457)
++...+++--+.+++++++..|+-+.+.+.++..+ .|| ++|++..++|.-+...+..- +++|+.+|.+.+..
T Consensus 73 ~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c----~PGkeKIl~cPPtysMY~v~A~iN---d~eVvkvpl~pdF~ 145 (375)
T KOG0633|consen 73 RLSDALAQDKPLTSDNICVGVGSDELIDLIIRCVC----DPGKEKILDCPPTYSMYVVDAAIN---DAEVVKVPLNPDFS 145 (375)
T ss_pred hhhhhcccCCCCCccceEEecCcHHHHHHHHhhee----cCCccceeecCCcceeEEEEeecC---CceEEEecCCCCcc
Confidence 45556666677888999999999999999999999 677 88999888887666554444 89999999999999
Q ss_pred CCHHHHHHhcCC--CceEEEEeccccccccccChHHHHHHHHhc-CCcEEEehhhh----cCCCcccCCCCcccEEEecc
Q 040741 184 VNLDELRAAIRP--DTGLISVMAVNNEIGVIQPMEEIGQICKEF-KIPFHTDAAQA----LGKIPVDVEKWNVSLMSLSG 256 (457)
Q Consensus 184 ~d~~~le~~i~~--~t~li~i~~~~~~~G~~~~l~~i~~l~~~~-~v~li~D~a~~----~g~~~~~~~~~~~Di~~~s~ 256 (457)
+|.+.+.+.++. ..++++++.++||+|.+...+.|.++.+-- |.++++|+|+- .++...-++++..-++.-++
T Consensus 146 lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTl 225 (375)
T KOG0633|consen 146 LNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTL 225 (375)
T ss_pred ccHHHHHHHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCceeehhhh
Confidence 999999988753 578999999999999999999998887754 89999999984 23332335566666788899
Q ss_pred ccccCCCC--ceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHH
Q 040741 257 HKIYGPKG--VGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIA-KKEMDYDHKRITALHDRLLNGI 333 (457)
Q Consensus 257 ~K~~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~-~~~~~~~~~~~~~~~~~l~~~l 333 (457)
+|.||..| +|+-+......+-+.....-+ ..+...-.++.+|+.-- .+.++..++.+.+.+.++...|
T Consensus 226 SKsfGLAGiRvG~~~~~~~ia~iln~~KaPY---------NiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keL 296 (375)
T KOG0633|consen 226 SKSFGLAGIRVGYGAFPLSIAEILNRAKAPY---------NISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKEL 296 (375)
T ss_pred hhhcCcceeEeecccccHHHHHHHHhccCCc---------cccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHh
Confidence 99999777 677776654333222211110 11222222222333211 1236777777777888888888
Q ss_pred hhcCCCeEEeCCCCCcccceEEEEEccccc---hHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEE
Q 040741 334 KEKLDGVVVNGSMERRYIGNLNLSFAYVEG---ESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIR 407 (457)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iR 407 (457)
.+ ++++.-+ +.+...+++.+.+.+-+. ..++..+ .|+.++-.. +++.-.+++|
T Consensus 297 t~-v~~~~~~--~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrg------------------se~~c~G~lR 355 (375)
T KOG0633|consen 297 TE-VPFLNDY--PGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRG------------------SEEGCKGYLR 355 (375)
T ss_pred hc-CccccCC--CCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcC------------------CccccceeEE
Confidence 88 7765421 112235556666653211 1222222 477665422 1223348999
Q ss_pred EecCCCCCHHHHHHHHHHHHHH
Q 040741 408 FGIGRFTTEAEVDRAIELTVKQ 429 (457)
Q Consensus 408 i~~~~~~t~edid~~~~~l~~~ 429 (457)
|+++ |+|+-+.+++.++++
T Consensus 356 itvG---t~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 356 ITVG---TPEENTVLMKCLKQF 374 (375)
T ss_pred EEcC---CcccchHHHHHHHhh
Confidence 9998 478888899988875
No 367
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.65 E-value=1.3e-13 Score=127.22 Aligned_cols=342 Identities=16% Similarity=0.234 Sum_probs=216.5
Q ss_pred CCCCCCCCHHHHHHHHHHHhhcc--CCCCCCccchhhhHHHHHHH-HHHHHHHHhCCCCCc--E-EEeCChHHHHHHHHH
Q 040741 63 MQATTPVDPRVLDAMLPFYLSRY--GNPHSRTHLFGWESEVAVET-ARSQIADLIGASPKE--I-IFTSGATESNNVSIK 136 (457)
Q Consensus 63 ~~~~~~~~~~v~~a~~~~~~~~~--~~p~~~~~~~~~~~~~~~~~-~~~~la~~~g~~~~~--i-~~t~g~T~a~~~al~ 136 (457)
.++-+..+..|++|+...+.+.| |.|.-+ |..|..+-+..+. .+++..+.|+++|+. + +=.-||+.||..+..
T Consensus 46 IaSENFts~aVmeAlGS~ltNKYSEGyPG~R-YYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYt 124 (477)
T KOG2467|consen 46 IASENFTSRAVMEALGSCLTNKYSEGYPGAR-YYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYT 124 (477)
T ss_pred eecccchHHHHHHHHhHHhhcccccCCCccc-ccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHh
Confidence 34556788999999999999876 566653 3335555455554 566777889998763 2 233458889999999
Q ss_pred HhhhhhcCCCCEEEEcCCC---CcchHHHHHHHHhcCcEEEEE-----eCC-CCCCCCHHHHHHhc-CCCceEEEEeccc
Q 040741 137 GVMHFYKDKKRHVITTQTE---HKCVLDSCRHLQQEGFEITYL-----PVG-ADGIVNLDELRAAI-RPDTGLISVMAVN 206 (457)
Q Consensus 137 ~~~~~~~~~g~~vi~~~~~---h~~~~~~~~~~~~~G~~v~~v-----~~~-~~~~~d~~~le~~i-~~~t~li~i~~~~ 206 (457)
+++ +|++.|.=.+.- |-+....... +.--+.-+++ .++ .+|.+|.|.||+.. .-++++|+...-
T Consensus 125 all----~Ph~RiMGLDLP~GGHLsHGy~T~~-kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iiaG~S- 198 (477)
T KOG2467|consen 125 ALL----KPHERIMGLDLPSGGHLSHGYQTPT-KKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIAGTS- 198 (477)
T ss_pred hhc----CCCCeeeeccCCCCCccccccccCC-ceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcCCcEEEeccc-
Confidence 999 898888754433 3333221110 0001122222 344 57899999999854 346777765432
Q ss_pred cccccccChHHHHHHHHhcCCcEEEehhhhcCCC-----cccCCCCcccEEEecccc-ccCCCCceEEEEecCCCccccc
Q 040741 207 NEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKI-----PVDVEKWNVSLMSLSGHK-IYGPKGVGALYMRRRPRIRVEP 280 (457)
Q Consensus 207 ~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~-----~~~~~~~~~Di~~~s~~K-~~g~~G~G~l~~~~~~~~~~~~ 280 (457)
-.-...+.+++.+||.+.|.++++|-||-.|-+ |-.+. .+|++..+.|| +-||+| |+++.|+..... .+
T Consensus 199 -aY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFe--y~DiVTTTTHKsLRGPRg-~mIFyRkGvk~~-~~ 273 (477)
T KOG2467|consen 199 -AYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFE--YCDIVTTTTHKSLRGPRG-AMIFYRKGVKSI-KP 273 (477)
T ss_pred -cchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCccc--ccceeeccccccccCCcc-eeEEEeccCCcC-CC
Confidence 244667899999999999999999999965433 32232 48999999999 789996 899888743221 11
Q ss_pred ccc---CCccc--------cccccCCCChhHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCC
Q 040741 281 LIN---GGGQE--------RGIRSGTLPTPLIVGFGSACEIAKK-EMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMER 348 (457)
Q Consensus 281 ~~~---~~~~~--------~~~~~~t~~~~~~~al~~al~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 348 (457)
... .+..+ -++..|.+| ..+.++..|++.... ++....++..++++.+.+.|.+ .|.+++.....
T Consensus 274 k~g~~i~ydlE~kINfaVFP~lQGGPHN-htIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~--~Gy~lvtgGTD 350 (477)
T KOG2467|consen 274 KQGKEILYDLEDKINFAVFPGLQGGPHN-HTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALIS--RGYKLVTGGTD 350 (477)
T ss_pred CCCCcceechhhhhhhhccccccCCCCc-chHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH--cCceEecCCcc
Confidence 100 00000 011222333 457777778887765 6889999999999999999999 58888755443
Q ss_pred cccceEEEEEccccchHHHhccc--CeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCC----HHHHHHH
Q 040741 349 RYIGNLNLSFAYVEGESLLMGLK--EVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTT----EAEVDRA 422 (457)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~l~--~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t----~edid~~ 422 (457)
.+...+.+.-.++++......++ +|.+.-... .|-......+.||++-...++ ++|++++
T Consensus 351 nHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtv--------------pGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v 416 (477)
T KOG2467|consen 351 NHLVLVDLRPKGVDGARVEKVLELCHIALNKNTV--------------PGDKSALSPGGIRIGTPAMTSRGFGEEDFEKV 416 (477)
T ss_pred ceEEEEeccccCCchHHHHHHHHHhhhhhcCCcC--------------CCCccccCCCceeccchhhcccCccHHHHHHH
Confidence 33333344445666654443332 222211110 011123344899999877665 6899999
Q ss_pred HHHHHHHHHHH
Q 040741 423 IELTVKQVEKL 433 (457)
Q Consensus 423 ~~~l~~~~~~~ 433 (457)
.+.|.++++-.
T Consensus 417 ~~fi~~av~i~ 427 (477)
T KOG2467|consen 417 ADFIDRAVKIA 427 (477)
T ss_pred HHHHHHHHHHH
Confidence 98888887643
No 368
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.65 E-value=2.7e-13 Score=128.28 Aligned_cols=299 Identities=16% Similarity=0.137 Sum_probs=205.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHH-HHHhcCcEEEEE
Q 040741 98 ESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCR-HLQQEGFEITYL 176 (457)
Q Consensus 98 ~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~G~~v~~v 176 (457)
+..+..-+++..+++++|.+-.+.-+--++|.+-+.++++.... +.+++.++++...|+......+ +++..|++++..
T Consensus 117 GrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r~~-k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~ 195 (450)
T COG0403 117 GRLEALFEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKRVT-KKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVV 195 (450)
T ss_pred HHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHHhh-cCcCceEEecCCCCHHHHHHHHhhcccCceEEEEe
Confidence 44477888999999999999888999999999888888876642 2347899999999999999877 446668888888
Q ss_pred eCCCCCCCCHHHHHHhcCCCceEEEEeccccccc-cccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEec
Q 040741 177 PVGADGIVNLDELRAAIRPDTGLISVMAVNNEIG-VIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLS 255 (457)
Q Consensus 177 ~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G-~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s 255 (457)
+.+ |+++++++.+.++..+++..|+. .| ...++.+|.+.+|++|.++++=.-.-.-.+--...++|+||++++
T Consensus 196 ~~~-----d~~~l~~~~~~~~~gv~vQyP~~-~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pPGe~GADIvvG~ 269 (450)
T COG0403 196 DAD-----DLDDLESADDGDVFGVLVQYPNT-FGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKPPGEFGADIVVGS 269 (450)
T ss_pred ccc-----hhhhhhhccccCeEEEEEecCCC-CCccchhHHHHHHHHhhcCCEEEEEechhHhhccCCccccCCceEEec
Confidence 877 88999988334788888888864 67 666799999999999998886543322222234567899999999
Q ss_pred cccc-----cCCCCceEEEEecCCCccccccccCC-----------------ccccccccCCCChhHHHHH---HHHHH-
Q 040741 256 GHKI-----YGPKGVGALYMRRRPRIRVEPLINGG-----------------GQERGIRSGTLPTPLIVGF---GSACE- 309 (457)
Q Consensus 256 ~~K~-----~g~~G~G~l~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~t~~~~~~~al---~~al~- 309 (457)
.+.+ ||.+.+|++.++++...++.-.+.|- .|+-+-.-.|.|+....++ .+++-
T Consensus 270 ~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~ 349 (450)
T COG0403 270 AQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYA 349 (450)
T ss_pred CcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHH
Confidence 9984 45555999999987655544333221 1111223346665433332 22222
Q ss_pred --HHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHHhcc--cCeEecccCccCCCC
Q 040741 310 --IAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSAS 385 (457)
Q Consensus 310 --~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~ 385 (457)
+..+++.++.++..+++.++.++|++.-.++.+..+ .+...+.+.++......++.+. .|+-++.-
T Consensus 350 ~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~---~fFdt~~v~~~~~~~~~l~~~~~~~G~~L~~~------- 419 (450)
T COG0403 350 VYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD---HFFDTFTVRVPEEVAEALLAAAIAGGINLRRV------- 419 (450)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc---cceeeEEEecchhHHHHHHHHHHhcCCceeee-------
Confidence 223579999999999999999999961235776643 2233344444321122222222 34433311
Q ss_pred CChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHH
Q 040741 386 LEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQ 429 (457)
Q Consensus 386 ~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~ 429 (457)
..+.+-|++...++++||+.+++.+...
T Consensus 420 ----------------~~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 420 ----------------DADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred ----------------cCCceEEEeecccCHHHHHHHHHHHhhh
Confidence 1147778888889999999999988764
No 369
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.64 E-value=7.2e-14 Score=140.26 Aligned_cols=258 Identities=13% Similarity=0.061 Sum_probs=148.8
Q ss_pred CCCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChH
Q 040741 55 AGRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGAT 128 (457)
Q Consensus 55 ~~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T 128 (457)
..+.-|+|+.+. +...|++.+|+.+.+...... +.. .....++.++|.+++.. .+.+.|+++||
T Consensus 45 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~--------~~~-~~~~~~la~~l~~~~p~-~~~v~f~~sGs 114 (431)
T PRK06209 45 VDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCNF--------TRP-SAIELDAAESFLELIDG-ADMVKFCKNGS 114 (431)
T ss_pred CCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcCC--------CCC-CHHHHHHHHHHHHhCCc-cceEEEecCHH
Confidence 345568887543 357899999999998754211 111 12334667788887752 24699999999
Q ss_pred HHHHHHHHHhhhhhcCCCCEEEEc--CCCCcchHHHHH--HHHhcCcE------EEEEeCCCCCCCCHHHHHHhcC---C
Q 040741 129 ESNNVSIKGVMHFYKDKKRHVITT--QTEHKCVLDSCR--HLQQEGFE------ITYLPVGADGIVNLDELRAAIR---P 195 (457)
Q Consensus 129 ~a~~~al~~~~~~~~~~g~~vi~~--~~~h~~~~~~~~--~~~~~G~~------v~~v~~~~~~~~d~~~le~~i~---~ 195 (457)
+|++.|++....+. .+.+|+.. ...|. ...... .....|.. +..++ .-|+++++++++ .
T Consensus 115 eA~e~AlklAr~~t--gr~~i~~~~~~~~h~-~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~~~ 186 (431)
T PRK06209 115 DATSAAVRLARAYT--GRDLVARCADHPFFS-TDDWFIGTTPMSAGIPASVSALTVTFR-----YNDIASLEALFEDHPG 186 (431)
T ss_pred HHHHHHHHHHHHHh--CCCeEEEeccCcccc-ccccccccCCCCCCCChhHhccccccC-----CCCHHHHHHHHHhCCC
Confidence 99999999776542 34455553 22221 100000 00000110 11112 228899999885 3
Q ss_pred CceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhc-CCCcccCC---CCcccEEEeccccccC-CCCceEEEE
Q 040741 196 DTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQAL-GKIPVDVE---KWNVSLMSLSGHKIYG-PKGVGALYM 270 (457)
Q Consensus 196 ~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~-g~~~~~~~---~~~~Di~~~s~~K~~g-~~G~G~l~~ 270 (457)
+...|+++.+....+....+++|.++|++||+++|+|+++.. +....... ...+|++++ .|.+| ...+|++++
T Consensus 187 ~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~~~gv~PDi~t~--gK~lggG~p~~av~~ 264 (431)
T PRK06209 187 RIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQKLYGIVPDLSCF--GKALGNGFAVSALAG 264 (431)
T ss_pred CEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhHHhCCCcceeee--hhhhcCCcccEEEEE
Confidence 467888887754433333499999999999999999999842 21111111 124687655 49543 223688888
Q ss_pred ecCCCcc--ccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhh
Q 040741 271 RRRPRIR--VEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKE 335 (457)
Q Consensus 271 ~~~~~~~--~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~ 335 (457)
+++..+. +........... ....++++..+++..++++.++++ ...++.+++.+++++.|++
T Consensus 265 ~~~i~~~~~~~~~~~~~~~~~-~~T~~~np~~~aaa~a~l~~i~~~--~~~~~~~~~g~~l~~~L~~ 328 (431)
T PRK06209 265 KREYMELGGLEHTDRERVFLL-STTHGAETHALAAAIATMAIYRDE--DVIERLHEQGAKLAAGVNE 328 (431)
T ss_pred HHHHHhhhcccccCCCCceee-ccCCCCCHHHHHHHHHHHHHHhcc--CHHHHHHHHHHHHHHHHHH
Confidence 8765543 111000000000 011244567788888888888763 4566666666666666544
No 370
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.64 E-value=5e-14 Score=139.78 Aligned_cols=310 Identities=14% Similarity=0.132 Sum_probs=210.7
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCC
Q 040741 101 VAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGA 180 (457)
Q Consensus 101 ~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~ 180 (457)
....++++..|+.+|++. ..+.++|.|.||..++.+++ .+||.||+++.+|+|...++-.+ |+.++++....
T Consensus 70 G~i~eAqe~aA~~fgAd~-tyFvvNGTS~ank~vi~a~~----~~GD~VLvdRN~HKSi~~glila---Ga~Pvyl~p~~ 141 (557)
T COG1982 70 GPIKEAQELAARVFGADH-TYFVVNGTSTANKAVINAVL----TPGDKVLVDRNCHKSIHHGLILA---GATPVYLEPSR 141 (557)
T ss_pred ccHHHHHHHHHHHhCCCc-eEEEECCccHHHHHHHHhhc----CCCCEEEecCCccHHHHHHHHHc---CCceEEecCCC
Confidence 478899999999999875 37888888889999999999 89999999999999999886555 99999997753
Q ss_pred C------CCCCHHHHHHhcCCC--c-eEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCC-----CcccCCC
Q 040741 181 D------GIVNLDELRAAIRPD--T-GLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGK-----IPVDVEK 246 (457)
Q Consensus 181 ~------~~~d~~~le~~i~~~--t-~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~-----~~~~~~~ 246 (457)
+ |.++.+.+++++.++ . +++++.++ +..|+++++++|.+.++++++++..|++|.+-. .+..-..
T Consensus 142 np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnp-TYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~ 220 (557)
T COG1982 142 NPLYGIIGGIPLETFKEALLAHPDAEKLAVITNP-TYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALN 220 (557)
T ss_pred CccccccCCCCHHHHHHHHHhChhhheeEEEecC-ccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhh
Confidence 3 478999999877543 3 66777766 448999999999999999999999999997521 1221112
Q ss_pred CcccEEEeccccccC-CCCceEEEEecC-CC--ccccccccCCccccccccCCCChhHHHHHHHHHHHHHHh----hHHH
Q 040741 247 WNVSLMSLSGHKIYG-PKGVGALYMRRR-PR--IRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKE----MDYD 318 (457)
Q Consensus 247 ~~~Di~~~s~~K~~g-~~G~G~l~~~~~-~~--~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~----~~~~ 318 (457)
.+.|+++-|.||..| ..-...+.+++. .. +++...+. -+.+++|+.+.++++..|-...... ++..
T Consensus 221 ~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~------~h~STSPsY~l~ASlD~Ar~~~~~~G~~l~~~~ 294 (557)
T COG1982 221 GGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALM------MHQSTSPSYPLMASLDVARMQEGNAGRELWQEV 294 (557)
T ss_pred cCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHH------HHccCCchHHHHHHHHHHHHhhhhhhHHHHHHH
Confidence 478999999999554 443577777752 11 12222111 1234577777777777643333222 3344
Q ss_pred HHHHHHHHHHHHHHHhhcCCCeEEeCCCCC--cc----------------cceEEEEE--ccccchHHHhcc--cCeEec
Q 040741 319 HKRITALHDRLLNGIKEKLDGVVVNGSMER--RY----------------IGNLNLSF--AYVEGESLLMGL--KEVAVS 376 (457)
Q Consensus 319 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~----------------~~~~~~~~--~~~~~~~~~~~l--~~i~~~ 376 (457)
.++.-+.++++++.+.+ ++++.+.+++.. .. +.-+.+.. .++.+..+...| +++..
T Consensus 295 ~~~~i~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~L~e~gii~- 372 (557)
T COG1982 295 IDEAIDFRKALRRLINE-IGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKYLREHGIIP- 372 (557)
T ss_pred HHHHHHHHHHHHHHHHh-cCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHHHHHHHHcCCee-
Confidence 67778888888888888 888888765431 00 11111111 123344444444 23222
Q ss_pred ccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHhcChhHHHHHhcCCccc
Q 040741 377 SGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLREMSPLYEMVKEGIDIKQ 451 (457)
Q Consensus 377 ~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (457)
.+.+...+-+.++... .+-..+++.|.++.++..+-.|++++..+.-+...
T Consensus 373 ----------------------e~~~d~~~lll~~~~~--gk~~~lv~~L~~f~r~~d~d~~l~~vlp~~~~~~~ 423 (557)
T COG1982 373 ----------------------EETGDYSNLLLFSPGI--GKWQTLVDRLLEFKRRYDDDAPLKQVLPSLYDQYP 423 (557)
T ss_pred ----------------------eecCCceeeEEeeecc--chHHHHHHHHHHHHHhhhccchHhhhchhhhhccc
Confidence 2222234444444332 67777778888888888888888888887766655
No 371
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.60 E-value=3.6e-13 Score=126.56 Aligned_cols=248 Identities=15% Similarity=0.157 Sum_probs=161.0
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCCccch-hhhHHHHHHHHHHHHHHHhCC-CCCcEEEeCChHHHHHHHHHHhhhhhcCC
Q 040741 68 PVDPRVLDAMLPFYLSRYGNPHSRTHLF-GWESEVAVETARSQIADLIGA-SPKEIIFTSGATESNNVSIKGVMHFYKDK 145 (457)
Q Consensus 68 ~~~~~v~~a~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~la~~~g~-~~~~i~~t~g~T~a~~~al~~~~~~~~~~ 145 (457)
+-.|++.+++.+.+... .|.. ++-+.+ ..++++.+.+.++- .++.|.|+++||+|++.|++..+++...+
T Consensus 72 hanpev~ral~~q~~k~-------~hs~~~~~t~e-av~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~ 143 (433)
T KOG1401|consen 72 HANPEVARALAEQAKKL-------GHSSNGYFTLE-AVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKK 143 (433)
T ss_pred CCCHHHHHHHHHHHhhh-------eeccCccccHH-HHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhccc
Confidence 56799999999998764 1222 222333 66778888888854 34569999999999999999887664322
Q ss_pred C----CEEEE-cCCCCcchHHHHHHHHhcCc-------EEEEEeCCCCCCCCHHHHHHhcCCCc---eEEEEeccccccc
Q 040741 146 K----RHVIT-TQTEHKCVLDSCRHLQQEGF-------EITYLPVGADGIVNLDELRAAIRPDT---GLISVMAVNNEIG 210 (457)
Q Consensus 146 g----~~vi~-~~~~h~~~~~~~~~~~~~G~-------~v~~v~~~~~~~~d~~~le~~i~~~t---~li~i~~~~~~~G 210 (457)
. ..+|. ....|.-...+.......+. .+.++... .-|+.++++.+..++ ..|+++.+....|
T Consensus 144 ~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~---ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG 220 (433)
T KOG1401|consen 144 HPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAE---YNDSTALEKLFESHKGEIAAVIVEPIQGAGG 220 (433)
T ss_pred CCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecc---cCCHHHHHHHHHhCCCceEEEEEecccCCCC
Confidence 1 23555 44556555555544322221 11222222 237899999997665 7888999987777
Q ss_pred cccC----hHHHHHHHHhcCCcEEEehhhhc-CCCcc----cCCCCcccEEEecccc-ccCCCCceEEEEecCCCccccc
Q 040741 211 VIQP----MEEIGQICKEFKIPFHTDAAQAL-GKIPV----DVEKWNVSLMSLSGHK-IYGPKGVGALYMRRRPRIRVEP 280 (457)
Q Consensus 211 ~~~~----l~~i~~l~~~~~v~li~D~a~~~-g~~~~----~~~~~~~Di~~~s~~K-~~g~~G~G~l~~~~~~~~~~~~ 280 (457)
.+.. +..|..+|+++|+++|.|+++.. |.... ..-...+||+++. | +.|.-.+|+..++++..+.+.+
T Consensus 221 ~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t~a--K~L~gGlPigA~~v~~kV~~~i~~ 298 (433)
T KOG1401|consen 221 IIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDITTVA--KPLGGGLPIGATGVRDKVAEMISP 298 (433)
T ss_pred cccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCcceeeh--hhccCCceeEEEeehHHHHhhcCC
Confidence 6643 77899999999999999999873 32211 1111247888777 9 4444459999999987777654
Q ss_pred ccc---CCccccccccCCCChhHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHhh
Q 040741 281 LIN---GGGQERGIRSGTLPTPLIVGFGSACEIAKKE--MDYDHKRITALHDRLLNGIKE 335 (457)
Q Consensus 281 ~~~---~~~~~~~~~~~t~~~~~~~al~~al~~~~~~--~~~~~~~~~~~~~~l~~~l~~ 335 (457)
--+ |+.. ..++..+.+...+++.+.+. +.+..+..+.+++.+.+.+.+
T Consensus 299 ~~~l~hg~Tf-------~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~ 351 (433)
T KOG1401|consen 299 GDHLYHGGTF-------SGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKK 351 (433)
T ss_pred CCccccCccc-------CCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 433 3322 34556666666677766652 455555556666666666666
No 372
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.60 E-value=4.2e-13 Score=142.14 Aligned_cols=334 Identities=13% Similarity=0.055 Sum_probs=194.9
Q ss_pred EEecCCCC------C-CCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCC-CCcEEEeCChHHH
Q 040741 59 LYLDMQAT------T-PVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGAS-PKEIIFTSGATES 130 (457)
Q Consensus 59 i~l~~~~~------~-~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~i~~t~g~T~a 130 (457)
-|||..+. + ...|++.+|+.+.+.... ... ..+. ..+...++.++|.+..+.+ .+.++|+++|++|
T Consensus 366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~-hv~----~~~~-~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeA 439 (817)
T PLN02974 366 QQFDACASWWTQGPDPTLQPELARAVAYAAGRYG-HVM----FPEN-VHEPALRAAELLLGGPGKGWASRVFFSDNGSTA 439 (817)
T ss_pred eEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCC-ccc----cCcc-CCHHHHHHHHHHHhccCCCCCCEEEECCchHHH
Confidence 47776542 3 358999999999987631 111 0011 1245566777777755422 3469999999999
Q ss_pred HHHHHHHhhh-hhc---C-------------CCCEEEEcC-CCCcchHHHHHHHHhc----Cc-E------EEEEeCCC-
Q 040741 131 NNVSIKGVMH-FYK---D-------------KKRHVITTQ-TEHKCVLDSCRHLQQE----GF-E------ITYLPVGA- 180 (457)
Q Consensus 131 ~~~al~~~~~-~~~---~-------------~g~~vi~~~-~~h~~~~~~~~~~~~~----G~-~------v~~v~~~~- 180 (457)
++.|++-... ++. . .+.+||... .+|.....+....... .+ . ..+++.+.
T Consensus 440 vE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~ 519 (817)
T PLN02974 440 IEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTV 519 (817)
T ss_pred HHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCcc
Confidence 9999997754 321 1 244566544 4566666655443210 00 0 01111100
Q ss_pred -------------C------C----------CCC------------HHHHHHhcC--------CCceEEEEecc-ccccc
Q 040741 181 -------------D------G----------IVN------------LDELRAAIR--------PDTGLISVMAV-NNEIG 210 (457)
Q Consensus 181 -------------~------~----------~~d------------~~~le~~i~--------~~t~li~i~~~-~~~~G 210 (457)
. + ..| .+.+++.|. ++...|+++.+ +...|
T Consensus 520 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGG 599 (817)
T PLN02974 520 GMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGG 599 (817)
T ss_pred ccccccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCC
Confidence 0 0 000 245666664 34678888885 67678
Q ss_pred cccC----hHHHHHHHHhcCCcEEEehhhh-cCCC--cccC--CCCcccEEEecccc-ccCC-CCceEEEEecCCCcccc
Q 040741 211 VIQP----MEEIGQICKEFKIPFHTDAAQA-LGKI--PVDV--EKWNVSLMSLSGHK-IYGP-KGVGALYMRRRPRIRVE 279 (457)
Q Consensus 211 ~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~--~~~~--~~~~~Di~~~s~~K-~~g~-~G~G~l~~~~~~~~~~~ 279 (457)
++.| ++++.++|++||+++|.|+++. +|.. .+.. ....+|+++++ | +.|. -.+|+++++++..+.+.
T Consensus 600 mi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~~g--KgLtgG~~Plaa~l~~~~I~~~f~ 677 (817)
T PLN02974 600 MLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIACYA--KLLTGGLVPLAATLATEEVFEAFR 677 (817)
T ss_pred cccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEeec--ccccCCCCccEEEEEcHHHHHhhc
Confidence 8866 8999999999999999999986 3322 1111 12348999888 9 4433 35899999987665543
Q ss_pred ccccCCccccccccCCCChhHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH----hhcCCCeEEeCCCCCcccce
Q 040741 280 PLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKE--MDYDHKRITALHDRLLNGI----KEKLDGVVVNGSMERRYIGN 353 (457)
Q Consensus 280 ~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~--~~~~~~~~~~~~~~l~~~l----~~~~~~~~~~~~~~~~~~~~ 353 (457)
..........+. ..+.++..+++..++++.++++ .....+...++.+++.+.| .+ +|.+.=+ ...+.+
T Consensus 678 ~~~~~~~~~hg~-Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~-~p~V~~V----Rg~Gl~ 751 (817)
T PLN02974 678 GPSKLDALLHGH-SYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISS-LPNVERV----VSLGTV 751 (817)
T ss_pred cccccCCcccCC-CCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhh-CCCeeEE----EeeeeE
Confidence 110000000011 2256677788888889888763 4455666666666666555 33 3332111 112444
Q ss_pred EEEEEccccc---------hHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHH
Q 040741 354 LNLSFAYVEG---------ESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDR 421 (457)
Q Consensus 354 ~~~~~~~~~~---------~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~ 421 (457)
+.+.+..... ..+...+ +|+.+++. ++.|++.++..++++++++
T Consensus 752 ~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~------------------------Gnvi~l~pP~~i~~e~l~~ 807 (817)
T PLN02974 752 LALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPL------------------------GNVVYLMCGPTTSPETCTR 807 (817)
T ss_pred EEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEec------------------------CCEEEEeCCCCCCHHHHHH
Confidence 4555532110 1122211 35555431 2689999999999999999
Q ss_pred HHHHHHHHH
Q 040741 422 AIELTVKQV 430 (457)
Q Consensus 422 ~~~~l~~~~ 430 (457)
+++.|.+.+
T Consensus 808 ~~~~l~~~~ 816 (817)
T PLN02974 808 LLRKVYRRL 816 (817)
T ss_pred HHHHHHHHh
Confidence 999998765
No 373
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.59 E-value=4.8e-13 Score=125.20 Aligned_cols=325 Identities=16% Similarity=0.138 Sum_probs=204.3
Q ss_pred cCCCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHH-hCCC-----CCc--EEEeC
Q 040741 54 IAGRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADL-IGAS-----PKE--IIFTS 125 (457)
Q Consensus 54 ~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~-~g~~-----~~~--i~~t~ 125 (457)
+.+==+|-|-.+.+|+-+.|.+|-.....+. .+. .| -.-+....+.+.+.++ ||.+ .+. .+=|.
T Consensus 30 NLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~--~~k--~Y----l~i~G~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~ 101 (396)
T COG1448 30 NLGIGVYKDEDGKTPVLRAVKKAEKRLLEQE--KTK--NY----LPIEGLPEFLEAVQKLLFGADSPALAEDRVATVQTL 101 (396)
T ss_pred eeeeeeeeCCCCCcchhHHHHHHHHHhhccc--ccc--cc----CCcCCcHHHHHHHHHHhcCCCcHHHHhhhHhheecC
Confidence 3444478888888898888888877666543 111 11 1123455555666665 4533 111 56788
Q ss_pred ChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC--CCCCCCHHHHHHhcC---CCceEE
Q 040741 126 GATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG--ADGIVNLDELRAAIR---PDTGLI 200 (457)
Q Consensus 126 g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~le~~i~---~~t~li 200 (457)
|||.|+.++...+..+ .+...|.+++++++......... |+++...+-- .+..+|.+.+.+.+. ++..++
T Consensus 102 GGTGAL~~~A~fl~~~--~~~~~vwis~PtW~NH~~If~~a---Gl~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvL 176 (396)
T COG1448 102 GGTGALRVAADFLARF--FPDATVWISDPTWPNHKAIFEAA---GLEVETYPYYDAETKGLDFDGMLADLKTAPEGSVVL 176 (396)
T ss_pred CcchHHHHHHHHHHHh--CCCceEEeCCCCcHhHHHHHHhc---CCceeeeeccccccccccHHHHHHHHHhCCCCCEEE
Confidence 9999999999888765 46677999998887776665555 9999766542 334588888777664 456677
Q ss_pred EEeccccccccccC---hHHHHHHHHhcCCcEEEehhh-hcCCCcccCCCC--------cc-cEEEeccccccCCCC--c
Q 040741 201 SVMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQ-ALGKIPVDVEKW--------NV-SLMSLSGHKIYGPKG--V 265 (457)
Q Consensus 201 ~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~-~~g~~~~~~~~~--------~~-Di~~~s~~K~~g~~G--~ 265 (457)
.-...|||||.-.. |++|.++.++.+++.+.|-|| +++.- ++-+.+ +. -+++.|++|.||.-| +
T Consensus 177 LH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G-leeDa~~lR~~a~~~~~~lva~S~SKnfgLYgERV 255 (396)
T COG1448 177 LHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG-LEEDAYALRLFAEVGPELLVASSFSKNFGLYGERV 255 (396)
T ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccc-hHHHHHHHHHHHHhCCcEEEEehhhhhhhhhhhcc
Confidence 77889999998765 889999999999999999887 33322 221111 22 478889999766433 5
Q ss_pred eEEEEecCC---CccccccccCCccccccccCCCChhHHHHHHHHH------HHHHHhhHHHHHHHHHHHHHHHHHHhhc
Q 040741 266 GALYMRRRP---RIRVEPLINGGGQERGIRSGTLPTPLIVGFGSAC------EIAKKEMDYDHKRITALHDRLLNGIKEK 336 (457)
Q Consensus 266 G~l~~~~~~---~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al------~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 336 (457)
|++.+-.+- ..++...+.. ..| -.+..||..+..-....| ...++++..+++++++++..|.+.|++.
T Consensus 256 Ga~~vva~~~~~a~~v~sqlk~--~iR-~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~ 332 (396)
T COG1448 256 GALSVVAEDAEEADRVLSQLKA--IIR-TNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKAL 332 (396)
T ss_pred ceeEEEeCCHHHHHHHHHHHHH--HHH-hccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 555443221 1122111110 011 122344444443333333 1234468899999999999999999872
Q ss_pred CCC--eEEeCCCCCcccceEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCC
Q 040741 337 LDG--VVVNGSMERRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGR 412 (457)
Q Consensus 337 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~ 412 (457)
.+. +..+.. + .+ .|++.+.+.+++.... .+|.+... + ||++..
T Consensus 333 ~~~~~f~~i~~---Q-~G--MFsy~Gls~~QV~rLree~~IY~v~s-------------------------G--Ri~vaG 379 (396)
T COG1448 333 GAPRNFDFIIS---Q-RG--MFSYTGLSPEQVDRLREEFGIYLVAS-------------------------G--RINVAG 379 (396)
T ss_pred CCCcccchHhh---c-Cc--eeecCCCCHHHHHHHHHhccEEEecC-------------------------C--eeeecc
Confidence 222 333222 1 23 3566677776655443 46665432 2 888877
Q ss_pred CCCHHHHHHHHHHHHHH
Q 040741 413 FTTEAEVDRAIELTVKQ 429 (457)
Q Consensus 413 ~~t~edid~~~~~l~~~ 429 (457)
. +...|+++++++.++
T Consensus 380 l-~~~ni~~va~ai~~v 395 (396)
T COG1448 380 L-NTSNIDYVAKAIAAV 395 (396)
T ss_pred C-ChhhHHHHHHHHHhh
Confidence 4 478999999999875
No 374
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.58 E-value=1.2e-13 Score=129.76 Aligned_cols=309 Identities=18% Similarity=0.216 Sum_probs=197.3
Q ss_pred HHHHHHHHHHHHhCCCCC-cEEEeCChHHHHHHHHHHhhhh-hcC---------CCCEEEEcCCCCcchHHHHHHHHhcC
Q 040741 102 AVETARSQIADLIGASPK-EIIFTSGATESNNVSIKGVMHF-YKD---------KKRHVITTQTEHKCVLDSCRHLQQEG 170 (457)
Q Consensus 102 ~~~~~~~~la~~~g~~~~-~i~~t~g~T~a~~~al~~~~~~-~~~---------~g~~vi~~~~~h~~~~~~~~~~~~~G 170 (457)
.-.++.....+..|.+.. ..+|++||+-++.-++.....- +++ |.-.+.+++.+|+|+..++..++..-
T Consensus 142 mE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gt 221 (510)
T KOG0629|consen 142 MEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGT 221 (510)
T ss_pred ehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCC
Confidence 344566777888898764 7999999999888877765411 111 11234677788999999999884333
Q ss_pred cEEEEEeCCCCCCCCHHHHHHhcCC---C---ceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCccc-
Q 040741 171 FEITYLPVGADGIVNLDELRAAIRP---D---TGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVD- 243 (457)
Q Consensus 171 ~~v~~v~~~~~~~~d~~~le~~i~~---~---t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~- 243 (457)
..++.|+.+..|.+++++||+.|-+ + +-+|.++...+..|.+.||+.|+++|++|++++|+|+|.+.|.+-..
T Consensus 222 d~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k 301 (510)
T KOG0629|consen 222 DHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRK 301 (510)
T ss_pred ceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChh
Confidence 7899999999999999999998853 2 57888888888899999999999999999999999999987654211
Q ss_pred ----CCC-CcccEEEeccccccC-CCCceEEEEecCC-CccccccccCCc-cc------------cccccCCC-Chh-HH
Q 040741 244 ----VEK-WNVSLMSLSGHKIYG-PKGVGALYMRRRP-RIRVEPLINGGG-QE------------RGIRSGTL-PTP-LI 301 (457)
Q Consensus 244 ----~~~-~~~Di~~~s~~K~~g-~~G~G~l~~~~~~-~~~~~~~~~~~~-~~------------~~~~~~t~-~~~-~~ 301 (457)
+.. -.+|.++.+.||+.| |--|++++.+.+- +.+.......+- +. ....-|.. +.. ..
T Consensus 302 ~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlW 381 (510)
T KOG0629|consen 302 HRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLW 381 (510)
T ss_pred hHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHHH
Confidence 111 147899999999655 5568888887753 222221111110 00 01111211 111 11
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccc--------hHHHhcccCe
Q 040741 302 VGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEG--------ESLLMGLKEV 373 (457)
Q Consensus 302 ~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~i 373 (457)
..+.+ -..+++++..+++-++++|+.+.|++ .+++..+-..+. -.++++|..+.. .+...+|..|
T Consensus 382 lmwka---KG~~Gfe~~v~k~~~lA~yl~~~lre-r~~~~~l~~~~p---e~~nv~fw~vp~~lR~~~~~~e~~~rL~kV 454 (510)
T KOG0629|consen 382 LMWKA---KGTQGFEAQVDKCLRLAEYLYDRLRE-REGFEMLFELEP---EHVNVCFWYVPPSLRGWQENPERDSRLVKV 454 (510)
T ss_pred HHHHh---cccccHHHHHHHHHHHHHHHHHHHHh-cccceehhcCCC---ceEEEeeccCchHhccCcccchhhhHHHhh
Confidence 11110 01135899999999999999999999 778666544332 233444432211 1222222211
Q ss_pred EecccCccCCCCCChhHHH-------HHcCCCc-cCCCCeEEEecCCC-CCHHHHHHHHHHHHHHH
Q 040741 374 AVSSGSACTSASLEPSYVL-------RALGVDE-DMAHTSIRFGIGRF-TTEAEVDRAIELTVKQV 430 (457)
Q Consensus 374 ~~~~g~~~~~~~~~~~~~l-------~~~g~~~-~~~~~~iRi~~~~~-~t~edid~~~~~l~~~~ 430 (457)
+ |+..- ..+|+.+ ....+.+|+.++.. .+.+|+|.+++.|...-
T Consensus 455 a-------------PkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlg 507 (510)
T KOG0629|consen 455 A-------------PKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLG 507 (510)
T ss_pred C-------------cHHHHHHHhccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHhc
Confidence 1 11100 0122322 22346889888764 67899999999887654
No 375
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.57 E-value=6.5e-13 Score=129.18 Aligned_cols=258 Identities=17% Similarity=0.233 Sum_probs=161.4
Q ss_pred CCcEEecCCCC------CCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHH
Q 040741 56 GRPLYLDMQAT------TPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATE 129 (457)
Q Consensus 56 ~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~ 129 (457)
.+.-|+|+.+. +.-+|++.+++.+.+....-.... + ...+...++.++|.+.++-..+.++|++||++
T Consensus 14 dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~-----~-~~~~~~~~la~~L~~~~p~~~~~v~f~~sGse 87 (339)
T PF00202_consen 14 DGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFS-----G-FTHPEAAELAEKLAELFPGGLDRVFFANSGSE 87 (339)
T ss_dssp TSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTT-----T-SEEHHHHHHHHHHHHHSSTTEEEEEEESSHHH
T ss_pred CCCEEEECCCCccceecCCCccccchhHHHHhhhccccccc-----c-eeccchhhhhhhhhhccccccceeeeccCchH
Confidence 44568887532 356799999999998764211101 1 11256778888999998544457999999999
Q ss_pred HHHHHHHHhhhhhc----CCCCEEEEcCCC-CcchHHHHHHH----HhcC-----cEEEEEeCCCCCCCCHHH-------
Q 040741 130 SNNVSIKGVMHFYK----DKKRHVITTQTE-HKCVLDSCRHL----QQEG-----FEITYLPVGADGIVNLDE------- 188 (457)
Q Consensus 130 a~~~al~~~~~~~~----~~g~~vi~~~~~-h~~~~~~~~~~----~~~G-----~~v~~v~~~~~~~~d~~~------- 188 (457)
|++.|++....++. ..+.+|+..... |.....+.... .+.+ ..+..+|.+ |+..
T Consensus 88 Ave~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~-----~~~~~~~~~~~ 162 (339)
T PF00202_consen 88 AVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFP-----DPAADEEEQAC 162 (339)
T ss_dssp HHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETT-----CHHHHHHHHHH
T ss_pred HHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCC-----ccchhhhHHHH
Confidence 99999998772211 345677766555 44444443321 0111 234666665 3333
Q ss_pred ---HHH----hcCCCceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhhc-CCC--cc--cCCCCcccEE
Q 040741 189 ---LRA----AIRPDTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQAL-GKI--PV--DVEKWNVSLM 252 (457)
Q Consensus 189 ---le~----~i~~~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~~-g~~--~~--~~~~~~~Di~ 252 (457)
+++ .-.++...|+++.+....|...+ +++|.++|++||+++|+|++++. |.. .+ ......+|++
T Consensus 163 ~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv 242 (339)
T PF00202_consen 163 LNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDIV 242 (339)
T ss_dssp HHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEE
T ss_pred HHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccccCccc
Confidence 222 22456789999999888887754 89999999999999999999973 322 12 1122357999
Q ss_pred Eecccc-ccCCCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 040741 253 SLSGHK-IYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLN 331 (457)
Q Consensus 253 ~~s~~K-~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~ 331 (457)
+++ | +.|...+|+++++++..+.+.+...+.. ...++..+++..+.++.+++ +.+.++.+++.+++++
T Consensus 243 ~~g--K~l~gG~p~sav~~~~~i~~~~~~~~~~~T-------~~g~p~~~aaa~~~l~~~~~--~~~~~~~~~~g~~l~~ 311 (339)
T PF00202_consen 243 TFG--KGLGGGLPISAVLGSEEIMEAFQPGSHGST-------FGGNPLSCAAALATLEILEE--EDLLERVRELGERLRE 311 (339)
T ss_dssp EEE--GGGGTTSSEEEEEEEHHHHTTSCTTSSTCT-------TTT-HHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHH
T ss_pred ccc--cchhhhhhcccccccchhhccccccccccc-------cccchHhhhhhhhHHHhhcc--HHHHHHHHHHHHHHHH
Confidence 887 9 4444568999999876665543332211 13456677777778888776 3444555555555555
Q ss_pred HHhh
Q 040741 332 GIKE 335 (457)
Q Consensus 332 ~l~~ 335 (457)
.|++
T Consensus 312 ~L~~ 315 (339)
T PF00202_consen 312 GLRE 315 (339)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 376
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.57 E-value=2e-15 Score=142.19 Aligned_cols=252 Identities=16% Similarity=0.230 Sum_probs=55.4
Q ss_pred CCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcC
Q 040741 65 ATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKD 144 (457)
Q Consensus 65 ~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~ 144 (457)
|-.++++++.+++.+....+ .|-...... |.. ...+..+++.++.++|+++ .+++++...|+.+++.++.
T Consensus 14 GRs~l~~~a~~a~~~~a~~Y-~nLE~dl~~-G~R-g~R~~~v~~ll~~ltgAea--A~VvNnnaAAv~L~l~~la----- 83 (367)
T PF03841_consen 14 GRSPLSEEAIEAVAEVASGY-SNLEYDLET-GKR-GSRYAHVEELLCELTGAEA--ALVVNNNAAAVLLALNTLA----- 83 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccc-ccccccccc-ccc-ccccccccccccccccccc--ccccccccccccccccccc-----
Confidence 56688999999998876542 111000000 111 1345678889999999976 8888888889999988887
Q ss_pred CCCEEEEcCCCCcchHHHHH---HHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccc--ccc--ccChHH
Q 040741 145 KKRHVITTQTEHKCVLDSCR---HLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNE--IGV--IQPMEE 217 (457)
Q Consensus 145 ~g~~vi~~~~~h~~~~~~~~---~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~--~G~--~~~l~~ 217 (457)
++.+||++..+-.-+..+.+ .+...|++++.+... ....+++++++|+++|.++.-.|.+|. .|- -.++++
T Consensus 84 ~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGtt--N~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~~~~~e 161 (367)
T PF03841_consen 84 KGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTT--NRTHLSDYEKAITENTAALLKVHTSNFRIQGFTGEVSLEE 161 (367)
T ss_dssp -------------------------------------------------------------------------------H
T ss_pred cccccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccHHH
Confidence 57789998887666655544 335568888877654 234679999999999999988887776 342 357999
Q ss_pred HHHHHHhcCCcEEEehhhhc---------CCCcc--cCCCCcccEEEeccccccCCCCceEEEEecCCCccccccccCCc
Q 040741 218 IGQICKEFKIPFHTDAAQAL---------GKIPV--DVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGG 286 (457)
Q Consensus 218 i~~l~~~~~v~li~D~a~~~---------g~~~~--~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~ 286 (457)
+++++++|++++++|...+. +..|- ..-..|+|+++||+.|++|.+-.|+++++++++++++..-.+.
T Consensus 162 l~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQaGiI~Gkk~lI~~lk~~pl~R- 240 (367)
T PF03841_consen 162 LAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQAGIIVGKKELIEKLKKHPLGR- 240 (367)
T ss_dssp HHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S-EEEEEEHHHHHHHHHHHHTT-
T ss_pred HHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCCeEEEEeCHHHHHHHhhCCCcc-
Confidence 99999999999999998742 11111 2234589999999999655333799999999888776443221
Q ss_pred cccccccCCCChhHHHHHHHHHHHHHH------h------hHHHHHHHHHHHHHHHHHHhh
Q 040741 287 QERGIRSGTLPTPLIVGFGSACEIAKK------E------MDYDHKRITALHDRLLNGIKE 335 (457)
Q Consensus 287 ~~~~~~~~t~~~~~~~al~~al~~~~~------~------~~~~~~~~~~~~~~l~~~l~~ 335 (457)
.-...-..++++.++++...+ + +....+.+++.++++...|..
T Consensus 241 ------alrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~ 295 (367)
T PF03841_consen 241 ------ALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKA 295 (367)
T ss_dssp ------T-B--HHHHHHHHHHHHH-------------------------------------
T ss_pred ------eEeeCHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccccccccccc
Confidence 124556678888888876542 0 233344455555555555554
No 377
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.56 E-value=4.6e-13 Score=125.57 Aligned_cols=303 Identities=16% Similarity=0.197 Sum_probs=157.2
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhh----------hhhcCCCCEEEEcCCCCcchHHHHHHHH
Q 040741 98 ESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVM----------HFYKDKKRHVITTQTEHKCVLDSCRHLQ 167 (457)
Q Consensus 98 ~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~----------~~~~~~g~~vi~~~~~h~~~~~~~~~~~ 167 (457)
+..+.+.++|+..++++|+++++++...+++..+..-+.+.. ++.+.+.-++|++.+.|--....++.+
T Consensus 66 G~l~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~- 144 (425)
T PF12897_consen 66 GGLDGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHF- 144 (425)
T ss_dssp S-SS--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHC-
T ss_pred CccCChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhh-
Confidence 445789999999999999999999988877755432222211 122234567899998887666665555
Q ss_pred hcCcEEEEEeCCCCCCCCHHHHHHhcC--CCce-EEEEeccccccccccChHHHHHHH----HhcCCcEEEehhhhcCCC
Q 040741 168 QEGFEITYLPVGADGIVNLDELRAAIR--PDTG-LISVMAVNNEIGVIQPMEEIGQIC----KEFKIPFHTDAAQALGKI 240 (457)
Q Consensus 168 ~~G~~v~~v~~~~~~~~d~~~le~~i~--~~t~-li~i~~~~~~~G~~~~l~~i~~l~----~~~~v~li~D~a~~~g~~ 240 (457)
|++.+.||.+++| +|++.+|+++. +..+ +-|++.-+||+|..++-+-+.+++ ...+-.|++|.||++-.+
T Consensus 145 --Giemi~VpM~~dG-PDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL 221 (425)
T PF12897_consen 145 --GIEMIPVPMTEDG-PDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHL 221 (425)
T ss_dssp --T-EEEEEEEETTE-E-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BS
T ss_pred --CcEEEecCCCCCC-CCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeec
Confidence 9999999999887 69999999984 4444 568899999999999965555554 346999999999997655
Q ss_pred cccCC---------------CCcccEEEecccc-ccCCCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHH
Q 040741 241 PVDVE---------------KWNVSLMSLSGHK-IYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGF 304 (457)
Q Consensus 241 ~~~~~---------------~~~~Di~~~s~~K-~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al 304 (457)
.-+.. ..+.-++..|.+| .|...|++++..+++.++.+...+... +..+--+-.+
T Consensus 222 ~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~~---------tIgpdKvNQL 292 (425)
T PF12897_consen 222 YDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLSVQ---------TIGPDKVNQL 292 (425)
T ss_dssp SSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHHH----------S---HHHHH
T ss_pred cccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHHHHHHHHHhcCc---------eeCccHHHHH
Confidence 21110 0123367789999 688889999999987766665444211 1111111111
Q ss_pred HHH--H---H-HHHHhhHHHHHHHHHHHHHHHHHHhhcCC---C-eEEeCCCCCcccceEEEEEccccc--hHHHhcc--
Q 040741 305 GSA--C---E-IAKKEMDYDHKRITALHDRLLNGIKEKLD---G-VVVNGSMERRYIGNLNLSFAYVEG--ESLLMGL-- 370 (457)
Q Consensus 305 ~~a--l---~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l-- 370 (457)
..+ + + -+...+++..+-++-..+.+.+.|++++. + ..+.. |. +++ ++++...++ ..+....
T Consensus 293 RHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~-P~---GGY-FIsld~~~G~AkrvV~lake 367 (425)
T PF12897_consen 293 RHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTK-PK---GGY-FISLDVLDGTAKRVVELAKE 367 (425)
T ss_dssp HHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE----S---BSS--EEEEESTT-HHHHHHHHHH
T ss_pred HHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecC-CC---Cce-EEEEecCCChHHHHHHHHHH
Confidence 111 1 1 11112233333333333333333333222 2 33333 32 222 345543333 2232222
Q ss_pred cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 371 KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 371 ~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
.||.+.+-.+..| +|.+ ...+-|||+++. -+.||++.+++.+.-+++.
T Consensus 368 AGV~LT~AGAtfP-----------yg~D--P~D~nIRiAPS~-P~leel~~Am~~~~~cv~l 415 (425)
T PF12897_consen 368 AGVALTPAGATFP-----------YGKD--PRDSNIRIAPSY-PSLEELETAMDVFATCVKL 415 (425)
T ss_dssp TTEE---TTTTSG-----------GG----TTS-EEEE--SS-S-HHHHHHHHHHHHHHHHH
T ss_pred hCceeCCCCCCCC-----------CCCC--CCCCcEEecCCC-CCHHHHHHHHHHHHHHHHH
Confidence 6888887544443 2322 334899999987 4589999999999888764
No 378
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.56 E-value=2.4e-13 Score=129.29 Aligned_cols=240 Identities=17% Similarity=0.182 Sum_probs=165.5
Q ss_pred cccccCCCcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHH
Q 040741 50 KGVRIAGRPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATE 129 (457)
Q Consensus 50 ~~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~ 129 (457)
+.+.+..+.+..-+.+....++++++++.+.+.....- . .+.-..........+.+.+....|++ .++++++.+.
T Consensus 20 ~~viN~~G~v~~t~lG~s~~~~e~iea~~~~~~~~v~L-e--~~l~~g~~~~R~~~~~~~~~~~~~ae--a~~ivnnn~a 94 (395)
T COG1921 20 RRVINAIGTVLMTNLGRSLYSPEAIEAMKEAMRAPVEL-E--TDLKTGKRGARLTELAELLCGLTGAE--AAAIVNNNAA 94 (395)
T ss_pred hhhhhhhhhheeccCCCccCCHHHHHHHHHHhccccee-e--eecccchhhHHHHHHHHHHhcccchh--heeeECCcHH
Confidence 44555555566666778899999999999988754321 0 11101111122334444444444544 4899999999
Q ss_pred HHHHHHHHhhhhhcCCCCEEEEcC-----CCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEec
Q 040741 130 SNNVSIKGVMHFYKDKKRHVITTQ-----TEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMA 204 (457)
Q Consensus 130 a~~~al~~~~~~~~~~g~~vi~~~-----~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~ 204 (457)
|+.+++.++. +++ ++++.. ..|+.+.+.++.+ |.+++.+. ..+.....+++.+|.++|+++.-.+
T Consensus 95 AVll~~~al~----~~~-EvVis~g~lV~gg~~~v~d~~~~a---G~~l~EvG--~tn~t~~~d~~~AIne~ta~llkV~ 164 (395)
T COG1921 95 AVLLTLNALA----EGK-EVVVSRGELVEGGAFRVPDIIRLA---GAKLVEVG--TTNRTHLKDYELAINENTALLLKVH 164 (395)
T ss_pred HHHHHHhhhc----cCC-eEEEEccccccCCCCChhHHHHHc---CCEEEEec--ccCcCCHHHHHHHhccCCeeEEEEe
Confidence 9999888887 544 444322 4688888888777 88887775 4455688999999999999888776
Q ss_pred cccccccc--cChHHHHHHHHhcCCcEEEehhhhcCCC-ccc---CCCCcccEEEeccccccC-CCCceEEEEecCCCcc
Q 040741 205 VNNEIGVI--QPMEEIGQICKEFKIPFHTDAAQALGKI-PVD---VEKWNVSLMSLSGHKIYG-PKGVGALYMRRRPRIR 277 (457)
Q Consensus 205 ~~~~~G~~--~~l~~i~~l~~~~~v~li~D~a~~~g~~-~~~---~~~~~~Di~~~s~~K~~g-~~G~G~l~~~~~~~~~ 277 (457)
.+|. |.. .+.++++++||++|+++++|.+.+.-.. ..+ .-..|+|++++|+.|++| |. .|+++++++++++
T Consensus 165 s~~~-~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllgGPq-aGii~GkKelI~~ 242 (395)
T COG1921 165 SSNY-GFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLGGPQ-AGIIVGKKELIEK 242 (395)
T ss_pred eccc-cccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHhcCCCEEEEecchhcCCCc-cceEechHHHHHH
Confidence 6654 533 6788899999999999999999865311 112 224489999999999655 65 7999999988876
Q ss_pred ccccccCCccccccccCCCChhHHHHHHHHHHHHHH
Q 040741 278 VEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKK 313 (457)
Q Consensus 278 ~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~ 313 (457)
+...-.+.+. ......++++.+|++....
T Consensus 243 lq~~~l~Ral-------rv~K~tla~l~~aLe~y~~ 271 (395)
T COG1921 243 LQSHPLKRAL-------RVDKETLAALEAALELYLQ 271 (395)
T ss_pred HHhhhhhhhh-------hcCcHhHHHHHHHHHHHcC
Confidence 6544332222 4556778888889987764
No 379
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.52 E-value=2e-12 Score=120.53 Aligned_cols=277 Identities=17% Similarity=0.142 Sum_probs=156.8
Q ss_pred HHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEe---CChHHHHHHHHHHhhhhhcCCCCE
Q 040741 72 RVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFT---SGATESNNVSIKGVMHFYKDKKRH 148 (457)
Q Consensus 72 ~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t---~g~T~a~~~al~~~~~~~~~~g~~ 148 (457)
.|++|+.+.-.+... ..++..|||.. ...+.+++-.|+.||++. .++- .|||.|+.+++.+++ .|||+
T Consensus 28 KVL~Af~~~~vs~~h--f~~tTGYGY~D-~GRd~le~iyA~vfgaE~--ALVRpq~vSGTHAi~~~Lfg~L----rpGD~ 98 (403)
T PF06838_consen 28 KVLKAFQENRVSDSH--FAGTTGYGYDD-IGRDKLERIYADVFGAED--ALVRPQFVSGTHAIALALFGVL----RPGDE 98 (403)
T ss_dssp HHHHHHHHTT--GGG--CS---TT-TT--HHHHHHHHHHHHHCT-SE--EEEETTS-SHHHHHHHHHHHH------TT-E
T ss_pred HHHHHHHHcCCChhh--cCCCCcCCCCC-ccHHHHHHHHHHHhCchh--hhhcccccchHHHHHHHHHhcC----CCCCe
Confidence 466776665332111 11233345443 467779999999999976 4443 259999999999999 89999
Q ss_pred EEE-cCCCCcchHHHHHHH-------HhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccc----cccccChH
Q 040741 149 VIT-TQTEHKCVLDSCRHL-------QQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNE----IGVIQPME 216 (457)
Q Consensus 149 vi~-~~~~h~~~~~~~~~~-------~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~----~G~~~~l~ 216 (457)
++. +..-|....+.+... +..|++...++..++|.+|.+.++++++++|++|.+----.. +=.+..++
T Consensus 99 ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~ 178 (403)
T PF06838_consen 99 LLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTEDGTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIK 178 (403)
T ss_dssp EEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TTSSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHH
T ss_pred EEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeecCCCCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHH
Confidence 985 555666666665332 445788999999999999999999999999999988543211 11223355
Q ss_pred HHHHHHHhc--CCcEEEehhhhcCCCcccCCCCcccEEEecccc-ccC---CCCceEEEEecCCCcccccccc--CCccc
Q 040741 217 EIGQICKEF--KIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHK-IYG---PKGVGALYMRRRPRIRVEPLIN--GGGQE 288 (457)
Q Consensus 217 ~i~~l~~~~--~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K-~~g---~~G~G~l~~~~~~~~~~~~~~~--~~~~~ 288 (457)
++.+++|+. ++.+++|.+|+-........+.++|++.+|+-| ..| |. .|+++++++++++....+. |-+.+
T Consensus 179 ~~i~~vk~~~p~~iifVDNCYGEFvE~~EP~~vGADl~aGSLIKNpGGgiApt-GGYIaGr~~lVe~~a~RLTaPGiG~e 257 (403)
T PF06838_consen 179 EIIKFVKEINPDVIIFVDNCYGEFVETQEPTEVGADLMAGSLIKNPGGGIAPT-GGYIAGRKDLVERAAYRLTAPGIGKE 257 (403)
T ss_dssp HHHHHHHHH-TTSEEEEE-TTTTTTSSS-GGGGT-SEEEEETTSGGGTTT-SS--EEEEESHHHHHHHHHHHS-TTTGGG
T ss_pred HHHHHHHhhCCCeEEEEeCCcceeccccCccccchhheeccceeCCCCCccCc-CCEEechHHHHHHHHhhhcCCccccc
Confidence 666666665 899999999998877777778899999999999 544 45 4999999988887654443 33333
Q ss_pred cccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCC-CcccceEEEEEccccchHHH
Q 040741 289 RGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSME-RRYIGNLNLSFAYVEGESLL 367 (457)
Q Consensus 289 ~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 367 (457)
-+. +... .-.+...+- .. +....+..+-+-.....+++ .|+.+....+ .+.-.+..+.+.. .+.+.
T Consensus 258 ~G~---t~~~--~R~~~QGlF--lA--P~vV~eAlKgaif~A~~fe~--lG~~v~P~~~~~R~DiIQai~l~~--~e~l~ 324 (403)
T PF06838_consen 258 VGA---TLGT--NRLMFQGLF--LA--PHVVGEALKGAIFAAALFEK--LGFEVSPKPDDPRSDIIQAIELGS--PEKLI 324 (403)
T ss_dssp SS-----TTT--HHHHHHHHH--HH--HHHHHHHHHHHHHHHHHHHH--TT-EEES-TTS--SSS-EEEE-SS--HHHHH
T ss_pred ccc---Ccch--HHHHHhHHh--hc--hHHHHHHHHHHHHHHHHHHH--cCCcCCCCCCCCCCceEEEEECCC--HHHHH
Confidence 222 1111 111111111 11 33333333334444455566 5888876544 4445555566643 34444
Q ss_pred hccc
Q 040741 368 MGLK 371 (457)
Q Consensus 368 ~~l~ 371 (457)
...+
T Consensus 325 ~FC~ 328 (403)
T PF06838_consen 325 AFCQ 328 (403)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 380
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.50 E-value=1.8e-11 Score=129.24 Aligned_cols=288 Identities=13% Similarity=0.091 Sum_probs=194.7
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHH-HHHhcCcEEE
Q 040741 96 GWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCR-HLQQEGFEIT 174 (457)
Q Consensus 96 ~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~-~~~~~G~~v~ 174 (457)
..+..+..-+++.++++++|.+-.+.-+-.++|.+-+.++++... .+.++.+|++++..|+.+...++ +++..|++++
T Consensus 119 sQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~~-~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~ 197 (954)
T PRK12566 119 AQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRV-AKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELV 197 (954)
T ss_pred hhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHHH-hhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEE
Confidence 445557888999999999999987788888888877766655432 22346789999999999888766 4466688877
Q ss_pred EEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhh--hcCCCcccCCCCcccEE
Q 040741 175 YLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQ--ALGKIPVDVEKWNVSLM 252 (457)
Q Consensus 175 ~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~--~~g~~~~~~~~~~~Di~ 252 (457)
. +++++.+++++..+++..|+ ..|.+.++++|.+++|+.|.+++ +++. +++.+ ....++|+||+
T Consensus 198 ~-----------~~~~~~~~~~~~~v~vq~P~-~~G~i~d~~~i~~~~h~~gal~~-~~~d~laL~ll-~~Pge~GADI~ 263 (954)
T PRK12566 198 V-----------DAVDNLAAHAVFGALLQYPD-THGEIRDLRPLIDQLHGQQALAC-VAADLLSLLVL-TPPGELGADVV 263 (954)
T ss_pred E-----------cchhhcCCCCEEEEEEECCC-CceEEccHHHHHHHHHHcCCEEE-EEeCHHHHhCC-CChhhcCCcEE
Confidence 5 23444566677777777774 58999999999999999999866 4333 33332 23567899999
Q ss_pred Eeccccc-----cCCCCceEEEEecCCCccccccccCC-----------------ccccccccCCCChhHHHHHH---HH
Q 040741 253 SLSGHKI-----YGPKGVGALYMRRRPRIRVEPLINGG-----------------GQERGIRSGTLPTPLIVGFG---SA 307 (457)
Q Consensus 253 ~~s~~K~-----~g~~G~G~l~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~t~~~~~~~al~---~a 307 (457)
+++.+-+ ||.++.|++.+++++..++.-.+.|- .|+-+..-.|.|+....++. ++
T Consensus 264 vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~ 343 (954)
T PRK12566 264 LGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAG 343 (954)
T ss_pred eeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHH
Confidence 9987753 56666999999987655554333321 11112234566665444333 22
Q ss_pred HHH---HHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHHhcc--cCeEecccCccC
Q 040741 308 CEI---AKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACT 382 (457)
Q Consensus 308 l~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~ 382 (457)
+-. ..+++.++.+++..++.++.+.|.+ .|+++..+ .+...+.+.+. .+..++.... +++.++-
T Consensus 344 ~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~--~g~~~~~~---~fF~~~~v~~~-~~~~~~~~~a~~~~~n~r~----- 412 (954)
T PRK12566 344 FYAVYHGPEGLKRIAQRVHRLTAILAAGLEA--KGIKRLNR---HFFDTLTLEVG-GAQAAIIESAEAARINLRI----- 412 (954)
T ss_pred HHHHHhChHHHHHHHHHHHHHHHHHHHHHHh--cCCccccC---CccceEEEEcc-CCHHHHHHHHHHCCCeeEE-----
Confidence 222 2356889999999999999999998 68877543 22333334442 1233343322 4554431
Q ss_pred CCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHH
Q 040741 383 SASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTV 427 (457)
Q Consensus 383 ~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~ 427 (457)
.+.+.+.+++...++.+|++.++.++.
T Consensus 413 ------------------~~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 413 ------------------LGRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred ------------------eCCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 112678999999999999999999984
No 381
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=99.48 E-value=3.1e-11 Score=115.10 Aligned_cols=312 Identities=18% Similarity=0.234 Sum_probs=200.1
Q ss_pred hHHHHHHHH----HHHHHHHhCCCC---------CcEEEeCChHHHHHHHHHHhhhh----hcCC-----------CCEE
Q 040741 98 ESEVAVETA----RSQIADLIGASP---------KEIIFTSGATESNNVSIKGVMHF----YKDK-----------KRHV 149 (457)
Q Consensus 98 ~~~~~~~~~----~~~la~~~g~~~---------~~i~~t~g~T~a~~~al~~~~~~----~~~~-----------g~~v 149 (457)
.+.+...++ -++|+++++.+. ...++.++++++..+++.+.+.- .++. +-.+
T Consensus 106 ~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~ 185 (511)
T KOG0628|consen 106 ASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVA 185 (511)
T ss_pred ecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheE
Confidence 333444444 488888887532 23677778999988888875521 1111 1235
Q ss_pred EEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCC------ceEEEEeccccccccccChHHHHHHHH
Q 040741 150 ITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPD------TGLISVMAVNNEIGVIQPMEEIGQICK 223 (457)
Q Consensus 150 i~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~------t~li~i~~~~~~~G~~~~l~~i~~l~~ 223 (457)
..++..|.++-.++... |.+.+.++.+.+..++.+.|+++|.++ +-+++.+...+.+=...++.+|..+|+
T Consensus 186 Y~SDqahssveka~~i~---~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~ 262 (511)
T KOG0628|consen 186 YCSDQAHSSVEKACLIA---GVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCR 262 (511)
T ss_pred EecCcccchHHHhHhhc---ceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcchhh
Confidence 67888999999998887 999999999989899999999999764 234444444333335567999999999
Q ss_pred hcCCcEEEehhhhcCCCcc-cCCCC-----cccEEEeccccc-cCCCCceEEEEecCCC-cc---ccccccCC---cccc
Q 040741 224 EFKIPFHTDAAQALGKIPV-DVEKW-----NVSLMSLSGHKI-YGPKGVGALYMRRRPR-IR---VEPLINGG---GQER 289 (457)
Q Consensus 224 ~~~v~li~D~a~~~g~~~~-~~~~~-----~~Di~~~s~~K~-~g~~G~G~l~~~~~~~-~~---~~~~~~~~---~~~~ 289 (457)
++|+++|+|+||+..+.-. .+... .+|.+.+..||+ +--..|..++++++.. .+ ..|...-+ +...
T Consensus 263 ~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~~~ 342 (511)
T KOG0628|consen 263 EEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGSAP 342 (511)
T ss_pred hcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcchhhccCC
Confidence 9999999999998554321 11111 368999999994 4555689999988621 11 12222111 0111
Q ss_pred ccccCCCChhH-HHHHHHHHHH---HHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccc--
Q 040741 290 GIRSGTLPTPL-IVGFGSACEI---AKKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEG-- 363 (457)
Q Consensus 290 ~~~~~t~~~~~-~~al~~al~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 363 (457)
.++....+... .-++...+.+ .-+.+.+.+.+..++++.+.+.+.+ -+.+++..+ +..+.+.|+.++.+.
T Consensus 343 Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~-d~~FE~~~~---~~lgLvcFRlk~~N~~n 418 (511)
T KOG0628|consen 343 DYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRA-DPRFEIVNK---RILGLVCFRLKGDNEIN 418 (511)
T ss_pred CccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhc-CCcceeecc---cccceeEEeecCCcHHH
Confidence 22222222221 1122222211 1234777777888899999888877 678888664 446777778775532
Q ss_pred hHHHhcc---cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCC-CCCHHHHHHHHHHHHHHHHHHHhc
Q 040741 364 ESLLMGL---KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGR-FTTEAEVDRAIELTVKQVEKLREM 436 (457)
Q Consensus 364 ~~~~~~l---~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~-~~t~edid~~~~~l~~~~~~~~~~ 436 (457)
+.++.++ ..|.+.+.. + .+.=.|||++.. .++.+||++..+.|.+..+.+.+.
T Consensus 419 e~Ll~~in~~g~i~l~~~~------l--------------~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~~~ 475 (511)
T KOG0628|consen 419 EALLNRLNSSGRIHLVPAS------L--------------HGKFVLRFAVCSPLTNESDIDEAWKIIFEAADELFEA 475 (511)
T ss_pred HHHHHHHHhcCcEEEEEee------e--------------cceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence 3455555 234443221 1 122479999755 678999999999999999887655
No 382
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.48 E-value=2.8e-11 Score=112.95 Aligned_cols=259 Identities=19% Similarity=0.209 Sum_probs=165.5
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh----C--CCCCcEEEeCChHHHHHHHHHHhhhhh
Q 040741 69 VDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI----G--ASPKEIIFTSGATESNNVSIKGVMHFY 142 (457)
Q Consensus 69 ~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~----g--~~~~~i~~t~g~T~a~~~al~~~~~~~ 142 (457)
+|..+++-....+....|.-+. |.....++-+|+.+|+++ | ++|++|++|.|++.|+...+..+..
T Consensus 87 fp~Dai~RA~~~L~~~gGs~Ga------YS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~-- 158 (475)
T KOG0258|consen 87 FPTDAIKRAKRILNDCGGSLGA------YSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIA-- 158 (475)
T ss_pred CCHHHHHHHHHHHHhcCCcccc------cccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhc--
Confidence 7777787777777654442221 222245666777777776 3 4567899999999999999998876
Q ss_pred cCCCCEEEEcCCCCcchHHHHHHHHhcCcEEE--EEeCCCCCCCCHHHHHHhcCC-----CceEEEEeccccccccccC-
Q 040741 143 KDKKRHVITTQTEHKCVLDSCRHLQQEGFEIT--YLPVGADGIVNLDELRAAIRP-----DTGLISVMAVNNEIGVIQP- 214 (457)
Q Consensus 143 ~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~--~v~~~~~~~~d~~~le~~i~~-----~t~li~i~~~~~~~G~~~~- 214 (457)
.+++-|+++-+.|+-+...+..+ |...+ +++-+.++.+|.++|++.+.+ +++++++.++.||||.+..
T Consensus 159 -~~~~GvliPiPQYPLYsAti~l~---~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~ 234 (475)
T KOG0258|consen 159 -GKKTGVLIPIPQYPLYSATISLL---GGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSE 234 (475)
T ss_pred -CCCCceEeecCCCchhHHHHHHh---CCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcH
Confidence 78899999999999887766655 54443 445457889999999988754 5789999999999999876
Q ss_pred --hHHHHHHHHhcCCcEEEehhhhcCC------------CcccCCC---CcccEEE-ecccc-cc---CCCCceEEEEec
Q 040741 215 --MEEIGQICKEFKIPFHTDAAQALGK------------IPVDVEK---WNVSLMS-LSGHK-IY---GPKGVGALYMRR 272 (457)
Q Consensus 215 --l~~i~~l~~~~~v~li~D~a~~~g~------------~~~~~~~---~~~Di~~-~s~~K-~~---g~~G~G~l~~~~ 272 (457)
+++|..+|+++++.++.|+++--.. +...+.. .++.+++ .|.|| .+ |..| |++=+-+
T Consensus 235 e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RG-GYmEv~n 313 (475)
T KOG0258|consen 235 ENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRG-GYMESLN 313 (475)
T ss_pred HHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccC-Ceeeccc
Confidence 8899999999999999999873111 1011111 1233333 35678 43 4555 7775443
Q ss_pred CC---Ccccccccc------CCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEe
Q 040741 273 RP---RIRVEPLIN------GGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVN 343 (457)
Q Consensus 273 ~~---~~~~~~~~~------~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 343 (457)
.. ...+..... -.++..-..--.++.+.-. ..+....+-+.+.+..+..++.+.+.+.+ ++++.++
T Consensus 314 ~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~----Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns-~~gi~cn 388 (475)
T KOG0258|consen 314 RDPRVKQQIKKLASIKLCPQVSGQKLVDLVVNPPKPGDP----SYDLFSSEKDGILSSLRSRAKLTEDAFNS-LEGISCN 388 (475)
T ss_pred CChhHHHHHHHHHhhhhcCCccchhhhceecCCCCCCCc----chhhhhhhhHhHHHHHHHHhHHHHHHHhh-cCceeec
Confidence 21 111111110 0011100000011111111 11223334577778888888889999999 8999887
Q ss_pred CC
Q 040741 344 GS 345 (457)
Q Consensus 344 ~~ 345 (457)
..
T Consensus 389 ~~ 390 (475)
T KOG0258|consen 389 PV 390 (475)
T ss_pred cC
Confidence 64
No 383
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.44 E-value=3.2e-11 Score=118.80 Aligned_cols=307 Identities=12% Similarity=0.172 Sum_probs=198.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEeCC-hHHHHHHHHHHhhhhhcCCC----CEEEEcCCCCcchHHHHHHHHhcCcEE
Q 040741 99 SEVAVETARSQIADLIGASPKEIIFTSG-ATESNNVSIKGVMHFYKDKK----RHVITTQTEHKCVLDSCRHLQQEGFEI 173 (457)
Q Consensus 99 ~~~~~~~~~~~la~~~g~~~~~i~~t~g-~T~a~~~al~~~~~~~~~~g----~~vi~~~~~h~~~~~~~~~~~~~G~~v 173 (457)
..+.+.+++++|.++.|.+. +.|.++ |..+-...++.++.++..+| +..+++-..|.....++..+ |.+|
T Consensus 580 Y~~lf~~Le~~Lc~iTG~D~--~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Ma---gmkv 654 (1001)
T KOG2040|consen 580 YQQLFTELEKDLCEITGFDS--FSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMA---GMKV 654 (1001)
T ss_pred HHHHHHHHHHHhheeecccc--eeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhc---CCEE
Confidence 34789999999999999865 777665 44444455555554443333 45688999999998887776 9999
Q ss_pred EEEeCCCCCCCCHHHHHHhcCCC---ceEEEEeccccccccccC-hHHHHHHHHhcCCcEEEehhhhcCCCcc-cCCCCc
Q 040741 174 TYLPVGADGIVNLDELRAAIRPD---TGLISVMAVNNEIGVIQP-MEEIGQICKEFKIPFHTDAAQALGKIPV-DVEKWN 248 (457)
Q Consensus 174 ~~v~~~~~~~~d~~~le~~i~~~---t~li~i~~~~~~~G~~~~-l~~i~~l~~~~~v~li~D~a~~~g~~~~-~~~~~~ 248 (457)
+.+.++.+|.+|+.+|++..+.. -..+.++.+++ .|+..+ +++++++.++||-.++.|+|..-..+.+ ...++|
T Consensus 655 vpV~~~~~G~id~~dLk~kaekh~~~Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd~G 733 (1001)
T KOG2040|consen 655 VPVGCDANGNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGDIG 733 (1001)
T ss_pred EEeeccCCCCccHHHHHHHHHHhhhhhheeEEecccc-cccccccHHHHHHHHHhcCCEEEecCCCccceecccCCcccc
Confidence 99999999999999999987643 45667776654 688876 9999999999999999999987543332 345668
Q ss_pred ccEEEecccccc------CCCCceEEEEecCCCcccc--ccccC--Ccccccc------ccCCCChhHHHHHHHHHHHH-
Q 040741 249 VSLMSLSGHKIY------GPKGVGALYMRRRPRIRVE--PLING--GGQERGI------RSGTLPTPLIVGFGSACEIA- 311 (457)
Q Consensus 249 ~Di~~~s~~K~~------g~~G~G~l~~~~~~~~~~~--~~~~~--~~~~~~~------~~~t~~~~~~~al~~al~~~- 311 (457)
.|+--..+||-| |.+|+|-+.+++-+...+. +...- -+....+ .+|+.....+ .+ +-++.+
T Consensus 734 aDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpI-Sw-aYikmMG 811 (1001)
T KOG2040|consen 734 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPI-SW-AYIKMMG 811 (1001)
T ss_pred ccceeecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceeehh-HH-HHHHHhc
Confidence 999999999933 4567888988865443332 11110 0111111 1111111111 11 111111
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEc------cccchHHHhcccCeEe--cccCccCC
Q 040741 312 KKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFA------YVEGESLLMGLKEVAV--SSGSACTS 383 (457)
Q Consensus 312 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~i~~--~~g~~~~~ 383 (457)
..++....+..--+++|+.+.|+..+ . .++..+.+....-+.+... +++..+++.+|....+ ..-
T Consensus 812 ~~GL~~as~~AiLNaNYMakRLe~hY-k-il~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHaPTm----- 884 (1001)
T KOG2040|consen 812 SGGLKDASKIAILNANYMAKRLESHY-K-ILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHAPTM----- 884 (1001)
T ss_pred ccccchhhHHHhhhhHHHHHHHhhcc-c-eeEecCCcceeeeeeeechhhccccCCcHHHHHHHHHhccCCCCcc-----
Confidence 12477777777788999999999822 2 2333333333333333331 3556677777743222 111
Q ss_pred CCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHh
Q 040741 384 ASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLRE 435 (457)
Q Consensus 384 ~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~ 435 (457)
.+.+ .+.+-|-+....+++|+|+++++|..+-+++++
T Consensus 885 ----------swPV-----~gtLMIEPTESE~k~ElDRfcdAliSIreEI~~ 921 (1001)
T KOG2040|consen 885 ----------SWPV-----AGTLMIEPTESEDKAELDRFCDALISIREEIAQ 921 (1001)
T ss_pred ----------cccc-----CCceEeccCccccHHHHHHHHHHHHHHHHHHHH
Confidence 1111 277888888888899999999999988887764
No 384
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=99.43 E-value=4.2e-11 Score=107.15 Aligned_cols=340 Identities=15% Similarity=0.107 Sum_probs=225.7
Q ss_pred CcEEecCCCCCCCCHHHHHHHHHHHhhccCCCCC---CccchhhhHHHHHHHHHHHHHHHhCCCCC-cEEE-eCChHHHH
Q 040741 57 RPLYLDMQATTPVDPRVLDAMLPFYLSRYGNPHS---RTHLFGWESEVAVETARSQIADLIGASPK-EIIF-TSGATESN 131 (457)
Q Consensus 57 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~---~~~~~~~~~~~~~~~~~~~la~~~g~~~~-~i~~-t~g~T~a~ 131 (457)
..+.|. +|+..+|.+|+..+.+-+.++.|..-+ .+|+ +.+....+.+.+..++++++.+.. +++| ..|||..+
T Consensus 7 ~vvnFa-aGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHR-sk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~qF 84 (370)
T KOG2790|consen 7 RVVNFA-AGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHR-SKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTGQF 84 (370)
T ss_pred ceeecC-CCcccCCHHHHHHHHHHhhccCCCcceEEEeccc-chhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCcccc
Confidence 344543 356689999999988887765432111 1222 445668999999999999999754 3554 55577666
Q ss_pred HHHHHHhhh-hhcCCCCEEEEcCCCCcchHHHHHHHHhcCcE-EEEEeCC-CC--CCCCHHHHHHhcCCCceEEEEeccc
Q 040741 132 NVSIKGVMH-FYKDKKRHVITTQTEHKCVLDSCRHLQQEGFE-ITYLPVG-AD--GIVNLDELRAAIRPDTGLISVMAVN 206 (457)
Q Consensus 132 ~~al~~~~~-~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~-v~~v~~~-~~--~~~d~~~le~~i~~~t~li~i~~~~ 206 (457)
..+...+.. -..+.-|.|++..+.-.+..++-++ |.. .+..+.. .. ..+|.+.++ .+++...+..|...
T Consensus 85 aAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~----~~~~~V~~~~k~y~ygkvPd~~~w~--~~~da~yvyyCaNE 158 (370)
T KOG2790|consen 85 AAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKY----GTPNIVIPKLKSYTYGKVPDPSTWE--LNPDASYVYYCANE 158 (370)
T ss_pred cccchhhhccccCCccceEEeccccHHHHHHHHhh----CCceEEeccccccccCcCCChhhcc--cCCCccEEEEecCc
Confidence 555555542 1112457889888887776666443 544 3333332 12 345666665 34566688888877
Q ss_pred cccccccC-hHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCCceEEEEecCCCccccc---cc
Q 040741 207 NEIGVIQP-MEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEP---LI 282 (457)
Q Consensus 207 ~~~G~~~~-l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~---~~ 282 (457)
+..|+-.+ ++ +-.-++..++.|-..-+-+.++|+.++ ++++...+|-.||.|+-++++|++++.+..+ ..
T Consensus 159 TVHGVEf~~~P----~~~~~~~vlVaDmSSnflSrpvDvsk~--gvi~aGAQKN~G~aG~Tvvivr~dllg~~~~~tP~v 232 (370)
T KOG2790|consen 159 TVHGVEFDFIP----VNDPKGAVLVADMSSNFLSRPVDVSKF--GVIFAGAQKNVGPAGVTVVIVRKDLLGNALDITPSV 232 (370)
T ss_pred eeeceecCCCC----CCCCCCceEEEecccchhcCCccchhc--ceEEeccccccCccccEEEEEehhhhcccccCCccc
Confidence 77887654 32 224468999999999999999999874 5788889999999999999999988776543 32
Q ss_pred cCCcc--ccccccCCCChhHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHhhcCCCe-EEeCCCCCcccceEEEE
Q 040741 283 NGGGQ--ERGIRSGTLPTPLIVGFGSACEIAKK--EMDYDHKRITALHDRLLNGIKEKLDGV-VVNGSMERRYIGNLNLS 357 (457)
Q Consensus 283 ~~~~~--~~~~~~~t~~~~~~~al~~al~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~ 357 (457)
..+.. .....+.|+|...++.+.-.++++.+ ++.++.+...+.++.+.+.|.+ ..|+ .+..++..+...++.|+
T Consensus 233 ~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~-s~gfy~cpVe~~~RS~MNV~Fr 311 (370)
T KOG2790|consen 233 LDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDN-SNGFYRCPVEPSVRSRMNVPFR 311 (370)
T ss_pred cceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh-cCCeEEcccchhhhhhccccee
Confidence 22211 12344669999999988888998876 4888888889999999999998 5555 44444445555556666
Q ss_pred Eccccc-hHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 358 FAYVEG-ESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 358 ~~~~~~-~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
+...+- .+++..- ++.. ++.....-+.||-++-...+.++++.++..|+++.+.
T Consensus 312 i~~d~Le~eFLkeA~~~~mv---------------------~LKGhRSVGGiRASlYNAisv~~~q~L~~~m~~F~k~ 368 (370)
T KOG2790|consen 312 IEKDELEAEFLKEAAKEHMV---------------------QLKGHRSVGGIRASLYNAISVEEVQKLAAFMKEFQKK 368 (370)
T ss_pred ecchHHHHHHHHHHHHhhhh---------------------ccccccccccchhhhhccccHHHHHHHHHHHHHHHHh
Confidence 652211 1222111 1111 0111112278999998889999999999999998764
No 385
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.42 E-value=2.5e-12 Score=122.44 Aligned_cols=301 Identities=18% Similarity=0.146 Sum_probs=165.0
Q ss_pred HHHHHHHHHHHHHhCCC-CCcEEEeCChHH-HHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeC
Q 040741 101 VAVETARSQIADLIGAS-PKEIIFTSGATE-SNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPV 178 (457)
Q Consensus 101 ~~~~~~~~~la~~~g~~-~~~i~~t~g~T~-a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~ 178 (457)
.....+...+-+..|+. ...++.++-+|. ++.+.+.++. ....++.||.+...|.+.+.++..+ |++++.++.
T Consensus 56 ~ltn~l~~d~~~~~G~~~~~~~~~vP~atgm~l~l~l~~l~--~r~~a~~Viw~ridqkSc~kai~~A---Gl~~~vV~~ 130 (389)
T PF05889_consen 56 KLTNSLVLDALRLAGLRSVKSCFVVPMATGMSLTLCLLALR--MRPKAKYVIWPRIDQKSCFKAIERA---GLEPVVVEN 130 (389)
T ss_dssp HHHHHHHHHHHHHTTHTTHCEEEEESS-HHHHHHHHHHHHH--HHCT--EEEEEEEETHHHHHHHHHT---T-EEEEE-E
T ss_pred HHHHHHHHHHHHHcCCccccceEEEecccccHHHHHHHHHh--cccCCceEEEeeccccchHHHHHhc---CCeEEEeec
Confidence 34444455555567875 234777777664 5666666765 2256899999999999999998777 999999885
Q ss_pred C--CC-CCCCHHHHHHhcCC---CceEEEEeccccccccccC-hHHHHHHHHhcCCcEEEehhhhcCCCcc------cCC
Q 040741 179 G--AD-GIVNLDELRAAIRP---DTGLISVMAVNNEIGVIQP-MEEIGQICKEFKIPFHTDAAQALGKIPV------DVE 245 (457)
Q Consensus 179 ~--~~-~~~d~~~le~~i~~---~t~li~i~~~~~~~G~~~~-l~~i~~l~~~~~v~li~D~a~~~g~~~~------~~~ 245 (457)
. .+ -..|++.+|+++++ +..+.++++++...|...| +++|+++|++||++.++..||++-.... ...
T Consensus 131 ~~~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~ 210 (389)
T PF05889_consen 131 VLEGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWR 210 (389)
T ss_dssp EEETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHH
T ss_pred cCCCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHh
Confidence 4 22 24578888888853 4577788888888898887 9999999999999999999999811100 000
Q ss_pred CCcccEEEecccc-ccCCCCceEEEEecC-CCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHH
Q 040741 246 KWNVSLMSLSGHK-IYGPKGVGALYMRRR-PRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRIT 323 (457)
Q Consensus 246 ~~~~Di~~~s~~K-~~g~~G~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~ 323 (457)
...+|+++-|.-| +.-|-|.+.++...+ .+..+...+.|. ....+..-.+...+.+...++.....+..
T Consensus 211 ~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~vs~~YpGR---------as~sp~ld~~itLl~LG~~g~~~ll~~r~ 281 (389)
T PF05889_consen 211 VGRVDAFVQSTDKNFMVPVGGAIMASFDPSGILAVSKEYPGR---------ASASPSLDLFITLLSLGCTGYGALLKERK 281 (389)
T ss_dssp HSTCSEEEEEHHHHHCEESSHEEEEESSHHHHHHHHHTSHSH---------BTSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcceeeeecCCCEEecCCCcEEEecCHHHHHHHHHHhhhh---------hhcccchHHHHHHHHHhhhHHHHHHHHHH
Confidence 1124555556666 555655444444332 112222222221 11112222233333333344555555555
Q ss_pred HHHHHHHHHHhhc---CCCeEEeCCCCCcccceEEEEEcccc------chHHHhcc--c---CeE-eccc-CccCCCCCC
Q 040741 324 ALHDRLLNGIKEK---LDGVVVNGSMERRYIGNLNLSFAYVE------GESLLMGL--K---EVA-VSSG-SACTSASLE 387 (457)
Q Consensus 324 ~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l--~---~i~-~~~g-~~~~~~~~~ 387 (457)
+...++.+.|+++ . +-++...+ ..+..+.+...... ...+...| + |+. +.++ ...+
T Consensus 282 ~~f~~l~erl~~~aee~-~e~ll~~p--~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~t----- 353 (389)
T PF05889_consen 282 ASFPYLKERLKKWAEEV-GERLLETP--RNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQT----- 353 (389)
T ss_dssp HHHHHHHHHHHHHHHHT-TEEBSSST--T-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEE-----
T ss_pred HHHHHHHHHHHHHHHHh-hhhhcCCC--CCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCccc-----
Confidence 5555555554431 2 23333222 23555566665332 23444455 2 322 1111 1111
Q ss_pred hhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Q 040741 388 PSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVE 431 (457)
Q Consensus 388 ~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~ 431 (457)
.+ .......++-++....+++||||.++++|+++++
T Consensus 354 -------sh-~~~yp~~Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 354 -------SH-SSNYPCPYLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp -------TT-SS--SSSEEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred -------cc-CCCCchHHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 01 1123458999988888999999999999999875
No 386
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.25 E-value=2.3e-09 Score=99.34 Aligned_cols=342 Identities=18% Similarity=0.149 Sum_probs=197.6
Q ss_pred CCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhh-hc
Q 040741 65 ATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHF-YK 143 (457)
Q Consensus 65 ~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~-~~ 143 (457)
|++.++.....+|..--+.+-|+ ..+..+++.+.+.+|.+. ++-|.-|..|-++.+..+... -.
T Consensus 56 GTgams~~qwaamm~GDEAYags-------------rs~~~L~~avkdifGfq~--~iPthQGRgAE~Il~~i~ik~~~~ 120 (471)
T COG3033 56 GTGAMTDKQWAAMMRGDEAYAGS-------------RSYYALADAVKDIFGFQY--TIPTHQGRGAENILIPILIKKGEQ 120 (471)
T ss_pred CcccccHHHHHHHhccchhhccc-------------ccHHHHHHHHHHhcCcee--eeeccCCccHHHHHHHHHhhhccc
Confidence 45588888888877664433222 345678889999999754 777888888877766655521 11
Q ss_pred CCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC----------CCCCCCHHHHHHhcCC----CceEEEEeccccc-
Q 040741 144 DKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG----------ADGIVNLDELRAAIRP----DTGLISVMAVNNE- 208 (457)
Q Consensus 144 ~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~----------~~~~~d~~~le~~i~~----~t~li~i~~~~~~- 208 (457)
.+|.+.+..+..|.-...+ +.+..|..++-++++ -.|.+|++.|++.|++ +...|+.+-.+|.
T Consensus 121 ~pg~~~~~~sN~~FdTTr~--h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~Nsa 198 (471)
T COG3033 121 EPGSKMVAFSNYHFDTTRG--HIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSA 198 (471)
T ss_pred cCCccccccccceecchhH--HHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEecccc
Confidence 3455566655566555443 223346666555443 2468999999999974 4556655555554
Q ss_pred ccccc---ChHHHHHHHHhcCCcEEEehhhhcCC------CcccCCCC-----------cccEEEecccc-ccCCCCceE
Q 040741 209 IGVIQ---PMEEIGQICKEFKIPFHTDAAQALGK------IPVDVEKW-----------NVSLMSLSGHK-IYGPKGVGA 267 (457)
Q Consensus 209 ~G~~~---~l~~i~~l~~~~~v~li~D~a~~~g~------~~~~~~~~-----------~~Di~~~s~~K-~~g~~G~G~ 267 (457)
.|... +++++.+||++|+++++.|++...-- ...+..+| -+|-.+.|.-| .....| |+
T Consensus 199 gGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmG-Gf 277 (471)
T COG3033 199 GGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMG-GF 277 (471)
T ss_pred CCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceeccc-cE
Confidence 55444 47899999999999999999875311 11111111 36888999988 778886 99
Q ss_pred EEEecCCC----ccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEe
Q 040741 268 LYMRRRPR----IRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHDRLLNGIKEKLDGVVVN 343 (457)
Q Consensus 268 l~~~~~~~----~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 343 (457)
++.+++-. ..++....- ++..-.+|......+.++...+....+ ....++-.+..+||.++|.+ -|+.++
T Consensus 278 l~~~D~~~fDvy~~~~~~~V~--~eG~~tYGgl~GrdmealAvGL~e~~~--~~yl~~Rv~Qv~YL~~~l~~--~GVpi~ 351 (471)
T COG3033 278 LCFKDDSFFDVYEECRTLVVV--QEGFPTYGGLAGRDMEALAVGLREGVN--FDYLAHRVAQVQYLADGLEE--AGVPIV 351 (471)
T ss_pred EEecCccHHHHHHHHHhheEe--eccccccCcccchhHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHHHHh--cCCeeE
Confidence 99998732 222221110 111123445555566666555544333 22333334455678888888 577666
Q ss_pred CCCCCcccceEEE--EEccc-----cchHHHhcc---cCeEecc-cCccCCCCCChhHHHHHcCCCccCCCCeEEEecCC
Q 040741 344 GSMERRYIGNLNL--SFAYV-----EGESLLMGL---KEVAVSS-GSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGR 412 (457)
Q Consensus 344 ~~~~~~~~~~~~~--~~~~~-----~~~~~~~~l---~~i~~~~-g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~ 412 (457)
.+.. .+..++.. -++.. .++.+...| .||-... |++...... .-|......-..+|+.+.+
T Consensus 352 ~paG-GHavfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~-------ktg~q~~~~~elvRltipR 423 (471)
T COG3033 352 QPAG-GHAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDP-------KTGKQHPPPAELVRLTIPR 423 (471)
T ss_pred ecCC-CceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCC-------CccccCCCchheeeEeccc
Confidence 5432 22222211 11222 234444444 3554433 322111000 0011111122689999987
Q ss_pred C-CCHHHHHHHHHHHHHHHHHHHhcCh
Q 040741 413 F-TTEAEVDRAIELTVKQVEKLREMSP 438 (457)
Q Consensus 413 ~-~t~edid~~~~~l~~~~~~~~~~~~ 438 (457)
. -|.+++|++++.+++..+.-.+-.+
T Consensus 424 rtYt~~HmD~V~~a~~~l~e~~~~ikg 450 (471)
T COG3033 424 RTYTQTHMDFVIEAFKALKENAEDIKG 450 (471)
T ss_pred cccchhHHHHHHHHHHHHHhccccCCC
Confidence 5 4789999999999988875444333
No 387
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=99.22 E-value=1e-09 Score=99.15 Aligned_cols=343 Identities=13% Similarity=0.112 Sum_probs=196.1
Q ss_pred cccccCCCcEEecCCC----CCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeC
Q 040741 50 KGVRIAGRPLYLDMQA----TTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTS 125 (457)
Q Consensus 50 ~~~~~~~~~i~l~~~~----~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~ 125 (457)
+.+....+.-|||.-. .+.+.|+|.+|....+...-.|.. ....+.++-+++..+.+-+++ -++|++
T Consensus 39 QYmfDE~g~~yLDCInNVaHvghchp~VV~A~~kQmat~~tN~R-------Flhd~lv~cA~~l~stlPeLs--vc~F~N 109 (452)
T KOG1403|consen 39 QYMFDEEGTRYLDCINNVAHVGHCHPEVVRAGAKQMATISTNNR-------FLHDELVQCARTLTSTLPELS--VCFFVN 109 (452)
T ss_pred ceeeccCcccHHHHhhhhhhcccCCHHHHHHHHHHHhHhcccch-------hhHHHHHHHHHHHhhcCCCce--EEEEec
Confidence 3333334444565322 346899999999998875433311 122355555666666666654 499999
Q ss_pred ChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHH---HhcC---cEEEE---EeCCC--CC------------
Q 040741 126 GATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHL---QQEG---FEITY---LPVGA--DG------------ 182 (457)
Q Consensus 126 g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~---~~~G---~~v~~---v~~~~--~~------------ 182 (457)
+|++|+.++++....|. +..|.|.+....|......++.. -+.| .++.+ .|+++ .|
T Consensus 110 SGSEANDLALRLAR~ft-khqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~ 188 (452)
T KOG1403|consen 110 SGSEANDLALRLARNFT-KHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADM 188 (452)
T ss_pred CCchhhHHHHHHHHhhc-ccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccc
Confidence 99999999999877653 44555555554454433332222 0111 12222 23321 11
Q ss_pred -CCCHHHHHHhcCC------CceEEEEeccccccccccC----hHHHHHHHHhcCCcEEEehhhh-cCCC---c--ccCC
Q 040741 183 -IVNLDELRAAIRP------DTGLISVMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAAQA-LGKI---P--VDVE 245 (457)
Q Consensus 183 -~~d~~~le~~i~~------~t~li~i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a~~-~g~~---~--~~~~ 245 (457)
..-.+++++.+.+ ..+.++.+..++=.|.+.| .+++++..+.+|-..|.|+++- +|.+ . +...
T Consensus 189 ~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y 268 (452)
T KOG1403|consen 189 GALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTY 268 (452)
T ss_pred hhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhh
Confidence 1112444544431 2344556666666788877 6789999999999999999984 4432 1 1122
Q ss_pred CCcccEEEeccccccC-CCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHH
Q 040741 246 KWNVSLMSLSGHKIYG-PKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITA 324 (457)
Q Consensus 246 ~~~~Di~~~s~~K~~g-~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~ 324 (457)
..-+||++.. |..| .-.++++..+++..+.+.. .+.+. |.....++..++...+.++.+++ +.+.++.++
T Consensus 269 ~fiPDIVtmg--KpmGNGhPVa~VattkeIA~Af~a----tgv~Y-FNTyGGnPVsCAv~laVm~v~e~--E~Lq~ha~~ 339 (452)
T KOG1403|consen 269 NFIPDIVTMG--KPMGNGHPVAAVATTKEIAQAFHA----TGVEY-FNTYGGNPVSCAVGLAVMRVCED--ENLQEHAQQ 339 (452)
T ss_pred ccccchheec--ccCCCCCeeeEEeccHHHHHHhcc----cccee-hhccCCCchhHHHHHHHHHHHhh--hhHHHHHHH
Confidence 2346888776 9444 4458999888764444322 12111 22223344444444456666665 666777777
Q ss_pred HHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccc-------hH----HHhcc---cCeEecccCccCCCCCChhH
Q 040741 325 LHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEG-------ES----LLMGL---KEVAVSSGSACTSASLEPSY 390 (457)
Q Consensus 325 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~----~~~~l---~~i~~~~g~~~~~~~~~~~~ 390 (457)
..+++...|++......++|+. ++..+++.+.-+.+ .+ +..+| .+|.++.-
T Consensus 340 vG~~L~~lL~~~k~kh~~IGDv---RGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaD------------ 404 (452)
T KOG1403|consen 340 VGEKLEVLLRRLKQKHECIGDV---RGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSAD------------ 404 (452)
T ss_pred HHHHHHHHHHHHhhhccceecc---ccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecC------------
Confidence 7777777776522234555542 13334444422211 11 12222 35555421
Q ss_pred HHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHh
Q 040741 391 VLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLRE 435 (457)
Q Consensus 391 ~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~ 435 (457)
...++.+.|-+....++|+++.++..|.+++..+.+
T Consensus 405 ---------GPh~NilKiKPPmCFneena~e~v~~ld~iLT~mee 440 (452)
T KOG1403|consen 405 ---------GPHRNILKIKPPMCFNEENADEFVLGLDEILTVMEE 440 (452)
T ss_pred ---------CCCCceeecCCCcccChhhHHHHHHHHHHHHHHHHH
Confidence 223478899988888899999999999999876544
No 388
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.06 E-value=6.9e-09 Score=93.93 Aligned_cols=172 Identities=18% Similarity=0.175 Sum_probs=127.6
Q ss_pred HHHHHHHHHHHHhCCCCC--cEEEeCChHHHHHHHHHHhhhhhcCCCCEEEE-cCCCCcchHHHHH-------HHHhcCc
Q 040741 102 AVETARSQIADLIGASPK--EIIFTSGATESNNVSIKGVMHFYKDKKRHVIT-TQTEHKCVLDSCR-------HLQQEGF 171 (457)
Q Consensus 102 ~~~~~~~~la~~~g~~~~--~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~-~~~~h~~~~~~~~-------~~~~~G~ 171 (457)
....+++-.|+.||++.. ...|.+ ||.|+..++.+++ .|||+++. ...-|....+.+. .++..|+
T Consensus 66 GRdtLe~vyA~vf~aE~a~VRpq~is-GTHAI~~aLfg~L----RpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfgi 140 (416)
T COG4100 66 GRDTLERVYAQVFGAEAALVRPQIIS-GTHAIACALFGIL----RPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFGI 140 (416)
T ss_pred chhHHHHHHHHHhccccceeeeeeec-chhHHHHHHHhcc----CCCCeEEEecCCcchhHHHHhccCCCCcccHHHhCc
Confidence 455688899999999764 244554 8999999999999 89999864 3333444443322 2344577
Q ss_pred EEEEEeCCCCCCCCHHHHHHhcCCCceEEEEecccc----ccccccChHHHHHHHHhc--CCcEEEehhhhcCCCcccCC
Q 040741 172 EITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNN----EIGVIQPMEEIGQICKEF--KIPFHTDAAQALGKIPVDVE 245 (457)
Q Consensus 172 ~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~----~~G~~~~l~~i~~l~~~~--~v~li~D~a~~~g~~~~~~~ 245 (457)
....+|...+|.+|.+.++.+++++|++|.+-.-.. |+=.+.+++++.++.|+- ++++++|.+++-........
T Consensus 141 ~Y~~v~Lt~~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~EPt 220 (416)
T COG4100 141 KYKAVPLTADGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEKEPT 220 (416)
T ss_pred ceeecccccCCcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhccCcc
Confidence 788888889999999999999999999998854321 122344567777777775 79999999999776666667
Q ss_pred CCcccEEEecccc-ccC--CCCceEEEEecCCCccc
Q 040741 246 KWNVSLMSLSGHK-IYG--PKGVGALYMRRRPRIRV 278 (457)
Q Consensus 246 ~~~~Di~~~s~~K-~~g--~~G~G~l~~~~~~~~~~ 278 (457)
+.++|++.+|+-| ..| ..-.|++.++.++.+..
T Consensus 221 ~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~ 256 (416)
T COG4100 221 HVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAA 256 (416)
T ss_pred ccchhhhccceeeCCCCceeeccceeechHHHHHhh
Confidence 7789999999999 444 22359999998877654
No 389
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.97 E-value=3e-08 Score=98.31 Aligned_cols=301 Identities=13% Similarity=0.111 Sum_probs=187.6
Q ss_pred cCCCCCCccchhhhHH------HHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcc
Q 040741 85 YGNPHSRTHLFGWESE------VAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKC 158 (457)
Q Consensus 85 ~~~p~~~~~~~~~~~~------~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~ 158 (457)
..||.+.+..-.|+.+ +.....+..++++.|.+-.+.-+..-||.|-+....+... .++.+++++...|+.
T Consensus 141 lenp~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~---~krkk~vvd~~~hpq 217 (1001)
T KOG2040|consen 141 LENPGWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMANASLLDEGTAAAEAMALCNRI---NKRKKFVVDSNCHPQ 217 (1001)
T ss_pred hhCCcceeccCCCchhhhhhhHHHHhhhHHhhhhccCCcccchhhhccchhHHHHHHHHHhh---cccceEEecCCCCcc
Confidence 3466665544444443 4555567888999999887888888888887777766654 667779999999999
Q ss_pred hHHHHHHH-HhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhc
Q 040741 159 VLDSCRHL-QQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQAL 237 (457)
Q Consensus 159 ~~~~~~~~-~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~ 237 (457)
....++-- +..|++++.. |+++...- ..+...+.+-.+.+ .|.+.+..++++.+++.+.++++-.--..
T Consensus 218 tlsV~~TRa~~~~i~v~~~--------~~~~~~~s-~~~v~gvlvQYP~t-~G~i~d~~el~~~a~~~~s~vv~atDLLa 287 (1001)
T KOG2040|consen 218 TLSVVKTRAKGFGIKVVVS--------DIKEADYS-SKDVSGVLVQYPDT-EGSVLDFDELVELAHANGSLVVMATDLLA 287 (1001)
T ss_pred hhhhhhccccccceeEEec--------CHHHhhcc-ccceeEEEEEcCCC-CCcccCHHHHHHHhhccCceEEEeehhhH
Confidence 98876632 2234443333 22222111 12223333333322 69999999999999999988775433322
Q ss_pred CCCcccCCCCcccEEEecccccc-----CCCCceEEEEecCCCccccccccCC-----------------ccccccccCC
Q 040741 238 GKIPVDVEKWNVSLMSLSGHKIY-----GPKGVGALYMRRRPRIRVEPLINGG-----------------GQERGIRSGT 295 (457)
Q Consensus 238 g~~~~~~~~~~~Di~~~s~~K~~-----g~~G~G~l~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~t 295 (457)
-.+.-...++|+||.++|.+.+. |.+-.|++.+++++...+.-.+.|- .|+-+..-.|
T Consensus 288 LtiLrpPgefGaDIavGSsQRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKAT 367 (1001)
T KOG2040|consen 288 LTILRPPGEFGADIAVGSSQRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKAT 367 (1001)
T ss_pred HHccCChhhcCceeeeccccccCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccc
Confidence 23333456789999999998853 3233677777765443333222221 1112223457
Q ss_pred CChhHHHHHHHHHHHH------HHhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHHhc
Q 040741 296 LPTPLIVGFGSACEIA------KKEMDYDHKRITALHDRLLNGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMG 369 (457)
Q Consensus 296 ~~~~~~~al~~al~~~------~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (457)
.|.....++.+-+..+ -++++.+.+++......+..+|+. .+.++.... +...+.+...+ +.+++...
T Consensus 368 SNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~--aghel~~k~---fFDTLkI~~~~-s~~~~l~r 441 (1001)
T KOG2040|consen 368 SNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKN--AGHELQHKP---FFDTLKIRCGC-SAEEVLDR 441 (1001)
T ss_pred hhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhh--cchhhcccc---ccceEEEEecC-cHHHHHHH
Confidence 7777777666554433 235889999999999999999998 455554431 33444455543 34444443
Q ss_pred c--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHH
Q 040741 370 L--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTV 427 (457)
Q Consensus 370 l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~ 427 (457)
- +.|.++- ...+.|-+++-..++.+|+|.++..+.
T Consensus 442 A~~~~iNlr~-----------------------~ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 442 AAKRQINLRL-----------------------VEDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred HHhhcCceEE-----------------------eecCceEEeecccccHHHHHHHHHHHc
Confidence 2 2333321 112678888888889999999998876
No 390
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.92 E-value=1.5e-07 Score=85.91 Aligned_cols=275 Identities=15% Similarity=0.139 Sum_probs=159.2
Q ss_pred EEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcE-EEEEeC-C-CCCCCCHHHHHHhcCCC-
Q 040741 121 IIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFE-ITYLPV-G-ADGIVNLDELRAAIRPD- 196 (457)
Q Consensus 121 i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~-v~~v~~-~-~~~~~d~~~le~~i~~~- 196 (457)
.+=+-|||.|+.++...+..++. +..|.+++++.......+..+ |+. +...+. + ++-.+|++-+.+.|...
T Consensus 102 ~vQslsGTGAl~~~A~Fl~~~~~--~~~VY~SnPTW~nH~~if~~a---Gf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~AP 176 (410)
T KOG1412|consen 102 GVQSLSGTGALRIAADFLATFYN--KNTVYVSNPTWENHHAIFEKA---GFTTVATYPYWDAENKCVDLEGFLSDLESAP 176 (410)
T ss_pred ceeeccccchhhhhHHHHHHhcc--cceeEecCCchhHHHHHHHHc---CCceeeeeeeecCCCceecHHHHHHHHhhCC
Confidence 45566799999999998887763 566999999887777666555 843 333322 2 33467888888777533
Q ss_pred --ceEEEEeccccccccccC---hHHHHHHHHhcCCcEEEehhh-hcCCCcccCCCC--------cc-cEEEeccccccC
Q 040741 197 --TGLISVMAVNNEIGVIQP---MEEIGQICKEFKIPFHTDAAQ-ALGKIPVDVEKW--------NV-SLMSLSGHKIYG 261 (457)
Q Consensus 197 --t~li~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D~a~-~~g~~~~~~~~~--------~~-Di~~~s~~K~~g 261 (457)
..+|+....+||||.-.. |..|+++.++.+.+.+.|.|+ ++.+-..+-+.| +. -+++-||.|-||
T Consensus 177 e~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfG 256 (410)
T KOG1412|consen 177 EGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFG 256 (410)
T ss_pred CCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhcc
Confidence 344445556899996543 888999999999999999886 443333333322 32 367889999665
Q ss_pred CCC--ceEEEE--ecCCC-ccccccccCCccccccccCCCChhHHHHHHHHH------HHHHHhhHHHHHHHHHHHHHHH
Q 040741 262 PKG--VGALYM--RRRPR-IRVEPLINGGGQERGIRSGTLPTPLIVGFGSAC------EIAKKEMDYDHKRITALHDRLL 330 (457)
Q Consensus 262 ~~G--~G~l~~--~~~~~-~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al------~~~~~~~~~~~~~~~~~~~~l~ 330 (457)
..+ +|-+.+ ++... ..+...+.- ..+.....|+.-+.--....| +...+.+..+..|+++.+..++
T Consensus 257 lYneRvGnltvv~~n~a~i~~v~SQl~l---viR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLr 333 (410)
T KOG1412|consen 257 LYNERVGNLTVVVNNPAVIAGVKSQLTL---VIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALR 333 (410)
T ss_pred cccccccceEEEecChhHHHHHHHHHHH---HHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 322 555443 32211 111111100 000111122221111111111 1122236777778888888888
Q ss_pred HHHhhcCCCeEEeCCCCCcccceEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEE
Q 040741 331 NGIKEKLDGVVVNGSMERRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRF 408 (457)
Q Consensus 331 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi 408 (457)
+.|.. + .-.|.-+....-+-.|++.+.++.++-... ..|.+.+. + ||
T Consensus 334 d~L~a-L---~TPGtWDHI~~QiGMFSyTGLtp~qV~~li~~h~vyLl~~-------------------------G--RI 382 (410)
T KOG1412|consen 334 DHLVA-L---KTPGTWDHITQQIGMFSYTGLTPAQVDHLIENHKVYLLSD-------------------------G--RI 382 (410)
T ss_pred HHHHh-c---CCCCcHHHHHhhccceeecCCCHHHHHHHHHhceEEEecC-------------------------C--cE
Confidence 88776 3 112222211111224677777666543333 35554321 2 67
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHHHHHh
Q 040741 409 GIGRFTTEAEVDRAIELTVKQVEKLRE 435 (457)
Q Consensus 409 ~~~~~~t~edid~~~~~l~~~~~~~~~ 435 (457)
+++..+ ...+|++++++.+.++.+.+
T Consensus 383 nisGLN-~~NveyVAkAIde~Vr~~~~ 408 (410)
T KOG1412|consen 383 NISGLN-MKNVEYVAKAIDETVRAIKS 408 (410)
T ss_pred eeeccc-cccHHHHHHHHHHHHHhhcc
Confidence 776654 58999999999999987653
No 391
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.87 E-value=9.2e-08 Score=89.19 Aligned_cols=283 Identities=12% Similarity=0.125 Sum_probs=147.1
Q ss_pred HHHHHHHHHHHHhC-C--CCCcEEEeCChHHHHHHHHHHhhhh--hcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEE
Q 040741 102 AVETARSQIADLIG-A--SPKEIIFTSGATESNNVSIKGVMHF--YKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYL 176 (457)
Q Consensus 102 ~~~~~~~~la~~~g-~--~~~~i~~t~g~T~a~~~al~~~~~~--~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v 176 (457)
..++..++|=+.+| + +...++|.+|+|+.++.++-++.+. -..+.-.|+...|.|+++.....++.-..++..-=
T Consensus 47 eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~Gd 126 (363)
T PF04864_consen 47 ELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWAGD 126 (363)
T ss_dssp HHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEEEE
T ss_pred HHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcccccc
Confidence 33333344444454 2 3446999999999999999999865 22345678889999998887766553333333211
Q ss_pred eCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEecc
Q 040741 177 PVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSG 256 (457)
Q Consensus 177 ~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~ 256 (457)
.....+.-.+.+-+=+++.||||-|.+-. .+++.-+..+|.|-|+-++....=....+-|++.|++
T Consensus 127 ---------a~~~~~~~~~~~~IElVTSPNNPDG~lr~-----~V~~g~~~k~I~D~AYYWPhyTpI~~~aD~DiMLFT~ 192 (363)
T PF04864_consen 127 ---------ASNFKNSDNPSPYIELVTSPNNPDGQLRE-----AVLNGSSGKVIHDLAYYWPHYTPITAPADHDIMLFTL 192 (363)
T ss_dssp ---------CCCGTT-S-CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTTS---S-B--SEEEEEH
T ss_pred ---------HHhhccCCCCCCeEEEEeCCCCCcccccc-----hhcCCCCcceeeeeeeecccccccCCCCCCceEEEEE
Confidence 11111111123444588999999996521 1335667888999999998763322344679999999
Q ss_pred ccccCCCC--ceEEEEecCCCc-cccccccCCccccccccCCCChh--HHHHHHHHHHHHHHh----------hHHHHHH
Q 040741 257 HKIYGPKG--VGALYMRRRPRI-RVEPLINGGGQERGIRSGTLPTP--LIVGFGSACEIAKKE----------MDYDHKR 321 (457)
Q Consensus 257 ~K~~g~~G--~G~l~~~~~~~~-~~~~~~~~~~~~~~~~~~t~~~~--~~~al~~al~~~~~~----------~~~~~~~ 321 (457)
+|+-|-.| +||.+++++... ++..++. ..|..+. ...-+...++.+.++ +..-.+.
T Consensus 193 SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~---------lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~ 263 (363)
T PF04864_consen 193 SKLTGHAGSRFGWALVKDEEVAKKMTKYME---------LNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYST 263 (363)
T ss_dssp HHHCS-GGG-EEEEEES-HHHHHHHHHHHH---------HHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHH
T ss_pred ecccCccccccceeeecCHHHHHHHHHHHH---------HhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHH
Confidence 99776444 999999986332 2222221 0122222 122222233333322 1222334
Q ss_pred HHHHHHHHHHHHhhcCCCeEEeCCCC----------CcccceEEEEEccccchHHHhcc--cCeEecccCccCCCCCChh
Q 040741 322 ITALHDRLLNGIKEKLDGVVVNGSME----------RRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPS 389 (457)
Q Consensus 322 ~~~~~~~l~~~l~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~ 389 (457)
.++.-++|++.+.. ...+.+..-.. .+.|.+..+..+..+..+....| .+|..++|..+
T Consensus 264 M~~RW~~L~~~~~~-S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed~DC~~~l~~~~I~tr~G~~f-------- 334 (363)
T PF04864_consen 264 MRERWEKLRAAVSA-SKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREEDEDCYAVLREAKIITRSGVLF-------- 334 (363)
T ss_dssp HHHHHHHHHHHHCC-SSSEEE---SCEEETTTTCEEE---SEEEEEESSCGGSSHHHHHHCTTEEEEEGGGG--------
T ss_pred HHHHHHHHHHHHHh-cCceecCcCCchhccccccccCCCCCeEEEecCCcccccHHHHHHhCCcccCCCCcc--------
Confidence 44445555666665 45555543211 11244333333322334555555 58888888654
Q ss_pred HHHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHH
Q 040741 390 YVLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVK 428 (457)
Q Consensus 390 ~~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~ 428 (457)
|.+. +++|+++-. ++++.|.++++|..
T Consensus 335 ------ga~~----ryVRlSml~--~~d~Fd~l~~rL~~ 361 (363)
T PF04864_consen 335 ------GADS----RYVRLSMLK--RDDDFDQLLERLSK 361 (363)
T ss_dssp ------TS-T----TEEEEESSS---HHHHHHHHHHHHC
T ss_pred ------CCCC----CeEEEeccC--CHHHHHHHHHHHHh
Confidence 3232 899999865 78999999999875
No 392
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.38 E-value=6.1e-06 Score=76.83 Aligned_cols=207 Identities=19% Similarity=0.200 Sum_probs=120.2
Q ss_pred CHHHHHHhcCC------CceEEEEecccccccccc--C--hHHHHHHHHhcCCcEEEehhhhcCCCccc---CC----CC
Q 040741 185 NLDELRAAIRP------DTGLISVMAVNNEIGVIQ--P--MEEIGQICKEFKIPFHTDAAQALGKIPVD---VE----KW 247 (457)
Q Consensus 185 d~~~le~~i~~------~t~li~i~~~~~~~G~~~--~--l~~i~~l~~~~~v~li~D~a~~~g~~~~~---~~----~~ 247 (457)
+++++|++|.. ..+.++++.++++.|--. | ...+.+++++|++.+|+|++|..|...-. .. +.
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~ 333 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDS 333 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCC
Confidence 56778877742 235788899998877443 2 88999999999999999999975433111 11 12
Q ss_pred cccEEEeccccccCCCCceEEEEecCCCccccccccCCccccccccCCCChhHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 040741 248 NVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSACEIAKKEMDYDHKRITALHD 327 (457)
Q Consensus 248 ~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~~~~~~~~~~~~~~~~~~ 327 (457)
.+|++.+| |-|-.. |+ +-+++.+- -+++.. +......+.-..-+...++.+.. +.+.+......+
T Consensus 334 PpD~vTFS--KK~q~g--Gf-fh~~~frp-n~pYri-------fNTWmGdP~k~lll~~vv~~I~~--~~Ll~n~~~vG~ 398 (484)
T KOG1405|consen 334 PPDVVTFS--KKFQTG--GF-FHDEEFRP-NEPYRI-------FNTWMGDPSKNLLLEEVVQEIKR--EDLLNNVAHVGK 398 (484)
T ss_pred Cccceehh--hhhhcC--cc-ccCcccCC-CchHHH-------hhhhcCChHHHHHHHHHHHHHhH--HHHHHHHHHHHH
Confidence 46888776 744433 32 23332221 122221 11123333444445556666665 566667777777
Q ss_pred HHHHHHhh---cCCCeEEeCCCCCcccceEEEEEcccc-chHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccC
Q 040741 328 RLLNGIKE---KLDGVVVNGSMERRYIGNLNLSFAYVE-GESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDM 401 (457)
Q Consensus 328 ~l~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~ 401 (457)
++.++|.+ .+|+..-.. ...+.++.+.++..+ .+.++..+ .|+.+- | |.
T Consensus 399 ~l~~gL~~Lq~~~p~~~~~~---RGrGTF~a~d~ps~~~Rdk~i~~~~~nGv~~G-G--Cg------------------- 453 (484)
T KOG1405|consen 399 ALLKGLLELQAKYPGKINNL---RGRGTFIAWDCPSGSIRDKLILIARLNGVNLG-G--CG------------------- 453 (484)
T ss_pred HHHHHHHHHHHhCchhhhcc---cccceEEEEeCCChHHHHHHHHHHHHcCceec-c--cc-------------------
Confidence 77776654 244432111 112444434433221 12333333 555432 2 22
Q ss_pred CCCeEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 040741 402 AHTSIRFGIGRFTTEAEVDRAIELTVKQVEK 432 (457)
Q Consensus 402 ~~~~iRi~~~~~~t~edid~~~~~l~~~~~~ 432 (457)
...|||-++...++.+.+-+++++.+.++.
T Consensus 454 -~~siRfRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 454 -DKSIRFRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred -cceeeeccceeehhhhHHHHHHHHHHHhcc
Confidence 278999999988889999999999988764
No 393
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=98.12 E-value=9e-06 Score=72.78 Aligned_cols=178 Identities=21% Similarity=0.257 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHHhCCCC-CcEEEeCChH-HHHHHHHHHhhhhhcCCC-CEEEEcCCCCcchHHHHHHHHhcCcEEEEEe
Q 040741 101 VAVETARSQIADLIGASP-KEIIFTSGAT-ESNNVSIKGVMHFYKDKK-RHVITTQTEHKCVLDSCRHLQQEGFEITYLP 177 (457)
Q Consensus 101 ~~~~~~~~~la~~~g~~~-~~i~~t~g~T-~a~~~al~~~~~~~~~~g-~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~ 177 (457)
....++....-.+.|+.. .+++.++=+| +++.+.+.++.. +.|+ ..|+..+....+....+-.+ |++++.+.
T Consensus 57 ~isne~a~~~i~l~glhav~nc~vvpl~tgmslslc~~s~r~--krpkakyiiw~ridqks~~ksi~~a---gfepiiie 131 (432)
T KOG3843|consen 57 CISNEFAKDAIHLAGLHAVANCFVVPLATGMSLSLCFLSLRH--KRPKAKYIIWLRIDQKSCFKSIIHA---GFEPIIIE 131 (432)
T ss_pred HHHHHHHHHHHHHhhhhhhhceeEEeccccccHHHHHHHHhh--cCCcccEEEEEecchHHHHHHHHhc---CCCceeee
Confidence 344455566666777753 3455554443 456666666553 2333 45677788888888887776 99988876
Q ss_pred CCCCC---CCCHHHHHHhcCCC-c-eEEEEeccccccc--cccChHHHHHHHHhcCCcEEEehhhhcCCCc------ccC
Q 040741 178 VGADG---IVNLDELRAAIRPD-T-GLISVMAVNNEIG--VIQPMEEIGQICKEFKIPFHTDAAQALGKIP------VDV 244 (457)
Q Consensus 178 ~~~~~---~~d~~~le~~i~~~-t-~li~i~~~~~~~G--~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~------~~~ 244 (457)
.--+| ..|++.+++.+.+. . .++|+....+-.. +...+++|..+|..|+++-++..||++-+.. ...
T Consensus 132 ~i~d~d~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa~~ 211 (432)
T KOG3843|consen 132 NILDGDELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAAA 211 (432)
T ss_pred ccccchHHHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHHHHHh
Confidence 43222 56889999888653 3 3555543322122 2233999999999999999999999864321 111
Q ss_pred CCCcccEEEecccc-ccCCCCceEEEE--ecCCCccccccccC
Q 040741 245 EKWNVSLMSLSGHK-IYGPKGVGALYM--RRRPRIRVEPLING 284 (457)
Q Consensus 245 ~~~~~Di~~~s~~K-~~g~~G~G~l~~--~~~~~~~~~~~~~~ 284 (457)
.-..+|.++-|+.| +.-|-| |+++. ++..+..+...+.|
T Consensus 212 ~~grida~vqsldknf~vpvg-gaiia~fk~n~iq~iak~ypg 253 (432)
T KOG3843|consen 212 ECGRIDAFVQSLDKNFMVPVG-GAIIAAFKDNFIQEIAKMYPG 253 (432)
T ss_pred hhccHHHHHHHhhhcceeecc-hhHhhHhHHHHHHHHHHhCCC
Confidence 12247899999999 455776 44442 22333444444443
No 394
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=97.97 E-value=0.00013 Score=68.00 Aligned_cols=325 Identities=16% Similarity=0.115 Sum_probs=177.4
Q ss_pred EEecCCCCCCCCHHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHh-CCC-----CCcEEE--eCChHHH
Q 040741 59 LYLDMQATTPVDPRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLI-GAS-----PKEIIF--TSGATES 130 (457)
Q Consensus 59 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~-g~~-----~~~i~~--t~g~T~a 130 (457)
.|=|-.+-..+-+.|.+|-.+...... .-.|..-....++.+..+++. |.. .+.++. |-|||.|
T Consensus 61 aYRdd~gKp~vL~~VrkAE~ql~~~~l--------dKEYlpI~Gl~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGa 132 (427)
T KOG1411|consen 61 AYRDDNGKPYVLPSVRKAEQQLASLSL--------DKEYLPITGLAEFNKLSAKLALGDNSPVIKEKRIVTVQTLSGTGA 132 (427)
T ss_pred ceecCCCCeeeeHHHHHHHHHHhhhcc--------cchhccccchHHHHHHHHHHhhcCCchhhhccceeEEEeccCcch
Confidence 444555555566777777665543111 001222235566667777764 321 123433 4459999
Q ss_pred HHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeC--CCCCCCCHHHHHHhcC---CCceEEEEecc
Q 040741 131 NNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPV--GADGIVNLDELRAAIR---PDTGLISVMAV 205 (457)
Q Consensus 131 ~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~le~~i~---~~t~li~i~~~ 205 (457)
+.++...+..|+ ++..|.++.++.....+....+ |+.+.++.- +.+..+|.+-+.+.+. +...+++-...
T Consensus 133 Lriga~Fl~~f~--~~~~I~ip~PTWgNh~~if~~a---g~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilLhaCa 207 (427)
T KOG1411|consen 133 LRVGAEFLARFY--PSRDIYIPDPTWGNHKNIFKDA---GLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILLHACA 207 (427)
T ss_pred hhHHHHHHHhhc--cccceeecCCcccccCcccccc---CcceeeeeeccccccccchHHHHHHHhcCCCCcEEEeehhh
Confidence 999888887775 4788999998877766555554 887755432 2334466655444443 23345666777
Q ss_pred ccccccc---cChHHHHHHHHhcCCcEEEehhhh-cCCCcccCCC--------Ccc-cEEEeccccccCCCC--ceEE--
Q 040741 206 NNEIGVI---QPMEEIGQICKEFKIPFHTDAAQA-LGKIPVDVEK--------WNV-SLMSLSGHKIYGPKG--VGAL-- 268 (457)
Q Consensus 206 ~~~~G~~---~~l~~i~~l~~~~~v~li~D~a~~-~g~~~~~~~~--------~~~-Di~~~s~~K~~g~~G--~G~l-- 268 (457)
|||||+- ..|++|.++.++.+.+-+.|.|+- +.+-.++-+. .+. -+++-|+.|-.|.-| +|.+
T Consensus 208 HNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~sv 287 (427)
T KOG1411|consen 208 HNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGALSV 287 (427)
T ss_pred cCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhhccceeEE
Confidence 8999965 348899999999999999999874 3222222211 122 356779999544322 4444
Q ss_pred -EEecCCCccccccccCCccccccccCCCChhHHHHHHHHH------HHHHHhhHHHHHHHHHHHHHHHHHHhhcCCCeE
Q 040741 269 -YMRRRPRIRVEPLINGGGQERGIRSGTLPTPLIVGFGSAC------EIAKKEMDYDHKRITALHDRLLNGIKEKLDGVV 341 (457)
Q Consensus 269 -~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al------~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 341 (457)
+-+.+...+++....- ..+.. +..||..+..-....+ +....++.-+.+++...++.+.+.|++ ++..
T Consensus 288 vc~~ad~A~rV~SQlk~--liRpm-YSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~--~gs~ 362 (427)
T KOG1411|consen 288 VCKDADEAKRVESQLKI--LIRPM-YSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEK--EGSP 362 (427)
T ss_pred EecCHHHHHHHHHHHHH--Hhccc-ccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhc--CCCC
Confidence 3222233333221110 00111 1234433222111111 111224677788888888888888887 3322
Q ss_pred EeCCCCCcccceEEEEEccccchHHHhcc--cCeEecccCccCCCCCChhHHHHHcCCCccCCCCeEEEecCCCCCHHHH
Q 040741 342 VNGSMERRYIGNLNLSFAYVEGESLLMGL--KEVAVSSGSACTSASLEPSYVLRALGVDEDMAHTSIRFGIGRFTTEAEV 419 (457)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~iRi~~~~~~t~edi 419 (457)
. +-.....-+-.|+|.+..+++.-... ..|... .--||+++..+ ...+
T Consensus 363 ~--~W~hI~~QIGMF~fTgl~peQv~~l~ke~~iYmT---------------------------~dGRiS~aG~s-s~nV 412 (427)
T KOG1411|consen 363 G--NWSHITKQIGMFCFTGLNPEQVDWLTKEYHIYLT---------------------------KDGRISMAGLS-SSNV 412 (427)
T ss_pred c--cHHHHHHhhheeeecCCCHHHHHHHHhhheeeec---------------------------cCceEeecccc-ccCC
Confidence 1 10000011113566666665543332 334332 22377777644 4678
Q ss_pred HHHHHHHHHHHH
Q 040741 420 DRAIELTVKQVE 431 (457)
Q Consensus 420 d~~~~~l~~~~~ 431 (457)
++++++|.++.+
T Consensus 413 ~yLa~aih~vtk 424 (427)
T KOG1411|consen 413 PYLADAIHAVTK 424 (427)
T ss_pred cccchhhHhHhc
Confidence 888888876654
No 395
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=97.36 E-value=0.0011 Score=56.33 Aligned_cols=54 Identities=15% Similarity=0.186 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHhC----CCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcc
Q 040741 101 VAVETARSQIADLIG----ASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKC 158 (457)
Q Consensus 101 ~~~~~~~~~la~~~g----~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~ 158 (457)
+..+.+.+.+.+..| +++++|++|+|++.|+.+++.+++ ++||.|+++.+.|++
T Consensus 96 ~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~----dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 96 NFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIA----DPGDAFLVPTPYYAA 153 (153)
T ss_pred HHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHc----CCCCEEEEeCCCCCC
Confidence 344445555555545 467889999999999999999999 899999999998863
No 396
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=96.60 E-value=0.0064 Score=61.54 Aligned_cols=354 Identities=16% Similarity=0.150 Sum_probs=185.3
Q ss_pred EecCCCCCCCCHHHHHHHHHHHh-hccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCC--CCcEEEeCChHHHHHHHHH
Q 040741 60 YLDMQATTPVDPRVLDAMLPFYL-SRYGNPHSRTHLFGWESEVAVETARSQIADLIGAS--PKEIIFTSGATESNNVSIK 136 (457)
Q Consensus 60 ~l~~~~~~~~~~~v~~a~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~--~~~i~~t~g~T~a~~~al~ 136 (457)
|+|+.+.+...+.-.+....... ....|||+ ...-+......+...|-++..+++-. ..+++|+. .|+|+.+.+.
T Consensus 23 yldhag~tl~sesq~~g~~~~sq~~e~~nphs-~~~ts~~l~~~v~Q~r~ril~~f~tta~dy~v~lp~-~t~al~~vae 100 (728)
T KOG2142|consen 23 YLDHAGRTLFSESQLEGVAFQSQSSENANPHS-HLGTSRSLARLVAQVRLRILALFNTTAFDYEVSLPA-LTEALKLVAE 100 (728)
T ss_pred HHHhhhhhhhhhcccchhhhhhhccccCCCcc-cccchHHHHHHHHHHHHHHHHHhccccccccchhHH-HHHHHHHHHH
Confidence 99999999888887777555443 34457775 34445555677777888888888864 33588988 9999999888
Q ss_pred HhhhhhcCCC---CEEEEcCCCCcchHHHHHHHHhcCcEEEEE-eCC---CCCCCCHHHHHHhcCCCceEEEEecccccc
Q 040741 137 GVMHFYKDKK---RHVITTQTEHKCVLDSCRHLQQEGFEITYL-PVG---ADGIVNLDELRAAIRPDTGLISVMAVNNEI 209 (457)
Q Consensus 137 ~~~~~~~~~g---~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v-~~~---~~~~~d~~~le~~i~~~t~li~i~~~~~~~ 209 (457)
++..+ ..+ +.+=.....|-+.....-.....|+.+.-+ ..+ .....++.+...-+ ....+.+.....|..
T Consensus 101 ~fp~~--s~tekid~lrs~~y~hls~s~~~~~~~~~~~gl~sy~q~~~i~~~~~~sls~~~~~l-s~~~L~~g~a~~nfe 177 (728)
T KOG2142|consen 101 AFPFY--SQTEKIDNLRSDEYGHLSSSGHLMRLDYSGIGLFSYSQTNEISDSEEFSLSESEANL-SEHSLFGGAAQSNFE 177 (728)
T ss_pred hCccc--cccccccchhhhhhcccccccceeeeeeeccceEEeeeeeeccccccccccccccCc-ccchhcccchhcccc
Confidence 77643 233 333344444544432111111113333222 211 11111221111111 134566666666666
Q ss_pred ccccChHHHHHHHHhcCCcEEEehhhhcCCCcccCCCCcccEEEeccccccCCCCceEEEEecCCCccccccccCCccc-
Q 040741 210 GVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVDVEKWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLINGGGQE- 288 (457)
Q Consensus 210 G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~~~~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~~~~~- 288 (457)
|..+....+-.+.-..+-++++|+|.-..+.+++...+.+|+... +.|+||.+. |++.+.++..+.. |++..
T Consensus 178 g~kik~ri~d~L~ipe~~y~lldtaSrvSaf~Ldaesy~f~~~~~-lltiFgyet-gAvlv~~r~A~~~-----Ggkt~s 250 (728)
T KOG2142|consen 178 GDKIKLRIMDRLNIPESEYVLLDTASRVSAFPLDAESYPFDFNPK-LLTIFGYET-GAVLVMNRSAELK-----GGKTAS 250 (728)
T ss_pred cceeeeeeecccccCCceEEEEEeecccccccchHhhCCCcccch-heeecCCCc-hhhHHHhhhhHhh-----cCccce
Confidence 664322222222234578899999998888899998899999999 999999774 6666654432222 32221
Q ss_pred ----------------cccccCCCChhHHHHHHHHHHHHH---HhhHHHHHHHHHHHHHHHHHHhhc---CCCeEEeCC-
Q 040741 289 ----------------RGIRSGTLPTPLIVGFGSACEIAK---KEMDYDHKRITALHDRLLNGIKEK---LDGVVVNGS- 345 (457)
Q Consensus 289 ----------------~~~~~~t~~~~~~~al~~al~~~~---~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~- 345 (457)
+++..|+.+.-.++++...+.... .++..+......+++++.-.|..- -|.+.+++.
T Consensus 251 a~f~wp~~~l~s~~lkkr~e~gk~~~kd~a~gl~vFp~~sRvtG~~ysy~wmt~al~~~whvlLda~~lG~kdmd~yglS 330 (728)
T KOG2142|consen 251 AEFSWPMLYLLSEKLKKRFEDGKLRFKDIAQGLFVFPTQSRVTGGMYSYSWMTLALANNWHVLLDALALGPKDMDSYGLS 330 (728)
T ss_pred eecccchHHHHHHHHHHHHhhccccccchhhheeccchHhhhcccchhHHHHHHHHhhhHHHHHhhhccCcchHhhhhhh
Confidence 222333433333332222221111 124444455556666666666541 011222211
Q ss_pred ---CCCcccceEEEEEccccchH----H--HhcccCeEecccCccCCCCCC--hhH----HHH---H-cCCCccCCCCeE
Q 040741 346 ---MERRYIGNLNLSFAYVEGES----L--LMGLKEVAVSSGSACTSASLE--PSY----VLR---A-LGVDEDMAHTSI 406 (457)
Q Consensus 346 ---~~~~~~~~~~~~~~~~~~~~----~--~~~l~~i~~~~g~~~~~~~~~--~~~----~l~---~-~g~~~~~~~~~i 406 (457)
|+ ...+.+.+.+...++.- . -..+.++..++|.+|.++-.+ |.. ... + .|..+..+..
T Consensus 331 ~f~Pd-fqg~sf~fv~g~d~psgfGcl~VkKs~i~~l~lrtGcfcn~Gack~~pgl~~~~~~~~~~~g~~cgD~dg~~-- 407 (728)
T KOG2142|consen 331 LFQPD-FQGPSFYFVFGRDDPSGFGCLEVKKSAISGLELRTGCFCNIGACKIYPGLYLEMSQKGLSAGKGCGDNDGQP-- 407 (728)
T ss_pred ccCcc-ceeeeEEEEeccCCCCceeeeeeehhhhhceeccCCCCCCCcceeecccccHHHHHHHhhhccccccCCCCc--
Confidence 11 11233334443221210 1 112578999999998765332 211 111 1 1111111222
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHH
Q 040741 407 RFGIGRFTTEAEVDRAIELTVKQV 430 (457)
Q Consensus 407 Ri~~~~~~t~edid~~~~~l~~~~ 430 (457)
++ ++..+.++++..+.++.+-+
T Consensus 408 -~s-~~~~~~~~~~a~~~~~v~~~ 429 (728)
T KOG2142|consen 408 -VS-GYMQTPADVGAYLSAQVSDV 429 (728)
T ss_pred -cc-ccccchhhhhHHHHHhhhhh
Confidence 44 56677889988888776654
No 397
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=79.25 E-value=57 Score=30.74 Aligned_cols=115 Identities=20% Similarity=0.206 Sum_probs=65.4
Q ss_pred HHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCC--CCcchHHHHHHHHhcCcEEEEEeCCCCCC
Q 040741 106 ARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQT--EHKCVLDSCRHLQQEGFEITYLPVGADGI 183 (457)
Q Consensus 106 ~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~--~h~~~~~~~~~~~~~G~~v~~v~~~~~~~ 183 (457)
...+--+++.- .++++|.|.+-.+..-++.... ++++-.|||.+. ++.+...+...+ +.|++.+.++
T Consensus 152 Ia~Qa~ehihs--nEviLT~g~SrTV~~FL~~A~k--k~Rkf~viVaE~~p~~qgH~~Ak~la-~~giettVI~------ 220 (353)
T KOG1465|consen 152 IAVQAIEHIHS--NEVILTLGSSRTVENFLKHAAK--KGRKFRVIVAEGAPNNQGHELAKPLA-QAGIETTVIP------ 220 (353)
T ss_pred HHHHHHHHhcc--CceEEecCccHHHHHHHHHHHh--ccCceEEEEeecCCcccchHhhHHHH-HcCCeeEEec------
Confidence 33333444443 4599999987776665554442 013445667553 333444554444 6688888876
Q ss_pred CCHHHHHHhcCCCceEEEEeccccc-cccccC--hHHHHHHHHhcCCcEEEeh
Q 040741 184 VNLDELRAAIRPDTGLISVMAVNNE-IGVIQP--MEEIGQICKEFKIPFHTDA 233 (457)
Q Consensus 184 ~d~~~le~~i~~~t~li~i~~~~~~-~G~~~~--l~~i~~l~~~~~v~li~D~ 233 (457)
|. ++-+.+..--++|+..+..-. .|...| ...++..||+|-+++++=+
T Consensus 221 -da-aVfA~MsrVnKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlA 271 (353)
T KOG1465|consen 221 -DA-AVFAMMSRVNKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLA 271 (353)
T ss_pred -cH-HHHHHhhhcceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEec
Confidence 33 344444443344444443333 444455 5678888899999888743
No 398
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=72.60 E-value=89 Score=29.69 Aligned_cols=101 Identities=19% Similarity=0.297 Sum_probs=59.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhhhhhcCCCC--EEEEcC--CCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhc
Q 040741 118 PKEIIFTSGATESNNVSIKGVMHFYKDKKR--HVITTQ--TEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAI 193 (457)
Q Consensus 118 ~~~i~~t~g~T~a~~~al~~~~~~~~~~g~--~vi~~~--~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i 193 (457)
+.++++|.|-+.+....+.... +.+. .|++.+ |.+.+... ++.+.+.|+++..+.-. ++-..+
T Consensus 119 dg~~IlTh~~S~~v~~~l~~A~----~~~k~~~V~VtESRP~~eG~~~-ak~L~~~gI~~~~I~Ds--------a~~~~~ 185 (301)
T COG1184 119 DGDVILTHSFSKTVLEVLKTAA----DRGKRFKVIVTESRPRGEGRIM-AKELRQSGIPVTVIVDS--------AVGAFM 185 (301)
T ss_pred CCCEEEEecCcHHHHHHHHHhh----hcCCceEEEEEcCCCcchHHHH-HHHHHHcCCceEEEech--------HHHHHH
Confidence 3459999998888877777766 5554 555543 44554443 46678889999888622 122222
Q ss_pred CC-CceEEEEeccccccccccC---hHHHHHHHHhcCCcEEEe
Q 040741 194 RP-DTGLISVMAVNNEIGVIQP---MEEIGQICKEFKIPFHTD 232 (457)
Q Consensus 194 ~~-~t~li~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D 232 (457)
+. +..++-...+ ..-|.+++ ---|+..||+.++++++=
T Consensus 186 ~~vd~VivGad~I-~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~ 227 (301)
T COG1184 186 SRVDKVLVGADAI-LANGALVNKIGTSPLALAARELRVPFYVV 227 (301)
T ss_pred HhCCEEEECccce-ecCCcEEeccchHHHHHHHHHhCCCEEEE
Confidence 22 2222222222 22344444 346888899999988763
No 399
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=69.56 E-value=99 Score=31.34 Aligned_cols=186 Identities=15% Similarity=0.183 Sum_probs=98.3
Q ss_pred CEEEEcCCCCcchHH-HHHHHHhcCcEEEEEeC----C---CCCCCCHHHHHHhcCC-----CceEEEEeccc-cccccc
Q 040741 147 RHVITTQTEHKCVLD-SCRHLQQEGFEITYLPV----G---ADGIVNLDELRAAIRP-----DTGLISVMAVN-NEIGVI 212 (457)
Q Consensus 147 ~~vi~~~~~h~~~~~-~~~~~~~~G~~v~~v~~----~---~~~~~d~~~le~~i~~-----~t~li~i~~~~-~~~G~~ 212 (457)
..+.+++..|.-... +++.+ |+....+.+ + -.|++|.-.+++.|++ ++-+|.+..+. +..|..
T Consensus 232 Pt~YiS~alh~~l~hYaaref---GIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~Gqn 308 (838)
T KOG0630|consen 232 PTFYISEALHMDLLHYAAREF---GIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQN 308 (838)
T ss_pred ceEEEcccccHHHHHHHHHHh---CCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcch
Confidence 345666666654433 33444 765544432 2 2358999999998875 34455554443 447888
Q ss_pred cChHHHHHHHHhcC-CcEEEehhhhcCCCcc----cCC---CCcccEEEeccccccCCCCceEEEEecCCCccccccccC
Q 040741 213 QPMEEIGQICKEFK-IPFHTDAAQALGKIPV----DVE---KWNVSLMSLSGHKIYGPKGVGALYMRRRPRIRVEPLING 284 (457)
Q Consensus 213 ~~l~~i~~l~~~~~-v~li~D~a~~~g~~~~----~~~---~~~~Di~~~s~~K~~g~~G~G~l~~~~~~~~~~~~~~~~ 284 (457)
..+-+|.++|++++ .|+|.-+ |++.++.+ +.. ....|.+.....-|+|.+..-++...+.+-......+..
T Consensus 309 Dmi~kildi~eahakfWLHasG-haiAALt~aepnnil~HV~eqldSMal~ialWLGiPSaPiV~LHRPleg~aaSafes 387 (838)
T KOG0630|consen 309 DMILKILDICEAHAKFWLHASG-HAIAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSAPIVLLHRPLEGSAASAFES 387 (838)
T ss_pred HHHHHHHHHHHHhhheeEeecc-chhhheeecCcccchhHHHHHHhhccchhHHHhCCCCCceEEeecccccccchhccc
Confidence 88999999999995 8888764 22222211 111 012466666655677855455666554321110000000
Q ss_pred C-ccccccccCCCChhHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhhcCCCeEEeCC
Q 040741 285 G-GQERGIRSGTLPTPLIVGFGSACEIAK-KEMDYDHKRITALHDRLLNGIKEKLDGVVVNGS 345 (457)
Q Consensus 285 ~-~~~~~~~~~t~~~~~~~al~~al~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 345 (457)
. -..+ ...+.+ ... ++..+- +.+..+.+..-.+.+.+.+.+.+ .+++.+.+.
T Consensus 388 dpi~re--kLdaLp--~Wt----a~q~LggKaIadmienAFll~kilfe~aSa-~~eiemig~ 441 (838)
T KOG0630|consen 388 DPILRE--KLDALP--LWT----ALQALGGKAIADMIENAFLLCKILFEGASA-CEEIEMIGH 441 (838)
T ss_pred ChHHHH--hhccch--HHH----HHHHhcccHHHHHHHHHHHHHHHHHHHhhc-CCceeEecc
Confidence 0 0000 001111 111 222221 12455556666677788888877 888888764
No 400
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=67.95 E-value=95 Score=29.17 Aligned_cols=104 Identities=22% Similarity=0.253 Sum_probs=53.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCC--CCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC
Q 040741 118 PKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQT--EHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP 195 (457)
Q Consensus 118 ~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~--~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~ 195 (457)
....++|-|-+..+...+..... .+++-+|++.+. ...+ ...++.+...|+++.+++.. .+-..+..
T Consensus 107 ~~~~ILT~~~S~~v~~~l~~a~~--~~~~~~V~v~es~P~~eG-~~~a~~L~~~gi~v~~i~d~--------~~~~~m~~ 175 (282)
T PF01008_consen 107 DGDTILTHGYSSTVERFLLSAKK--KGKKFRVIVLESRPYNEG-RLMAKELAEAGIPVTLIPDS--------AVGYVMPR 175 (282)
T ss_dssp TTEEEEEES--SHHHHHHHHHHH--TTEEEEEEEE--TTTTHH-HTHHHHHHHTT-EEEEE-GG--------GHHHHHHC
T ss_pred CCeEEEEeCCchHHHHHHHHHHH--cCCeEEEEEccCCcchhh-hhHHHHhhhcceeEEEEech--------HHHHHHHH
Confidence 44588888877777766666441 023345555442 2333 33455566779999999733 12222322
Q ss_pred --CceEEEEecccccccccc-C--hHHHHHHHHhcCCcEEEeh
Q 040741 196 --DTGLISVMAVNNEIGVIQ-P--MEEIGQICKEFKIPFHTDA 233 (457)
Q Consensus 196 --~t~li~i~~~~~~~G~~~-~--l~~i~~l~~~~~v~li~D~ 233 (457)
+..++-...+.. .|.+. . -..++-.||++++++++=+
T Consensus 176 ~vd~VliGad~v~~-nG~v~nk~Gt~~~a~~Ak~~~vPv~v~~ 217 (282)
T PF01008_consen 176 DVDKVLIGADAVLA-NGGVVNKVGTLQLALAAKEFNVPVYVLA 217 (282)
T ss_dssp TESEEEEE-SEEET-TS-EEEETTHHHHHHHHHHTT-EEEEE-
T ss_pred hCCeeEEeeeEEec-CCCEeehhhHHHHHHHHHhhCCCEEEEc
Confidence 333444444443 45443 3 4467788999999888653
No 401
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=67.16 E-value=1.2e+02 Score=29.06 Aligned_cols=102 Identities=20% Similarity=0.298 Sum_probs=55.9
Q ss_pred CcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCC--CCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC-
Q 040741 119 KEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQT--EHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP- 195 (457)
Q Consensus 119 ~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~--~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~- 195 (457)
..+++|.|.+......+..... .+++-+|++.+. ...+ ...++.+...|+++++++-+ .+-..+..
T Consensus 121 g~~ILT~~~S~tv~~~l~~A~~--~~k~~~V~v~EsrP~~~G-~~~a~~L~~~GI~vtlI~Ds--------av~~~m~~v 189 (310)
T PRK08535 121 GDVIMTHCNSSAALSVIKTAHE--QGKDIEVIATETRPRNQG-HITAKELAEYGIPVTLIVDS--------AVRYFMKDV 189 (310)
T ss_pred CCEEEEeCCcHHHHHHHHHHHH--CCCeEEEEEecCCchhhH-HHHHHHHHHCCCCEEEEehh--------HHHHHHHhC
Confidence 4478888866655555554431 134456666543 2333 33445566779999999733 11222222
Q ss_pred CceEEEEeccccccccccC---hHHHHHHHHhcCCcEEEe
Q 040741 196 DTGLISVMAVNNEIGVIQP---MEEIGQICKEFKIPFHTD 232 (457)
Q Consensus 196 ~t~li~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D 232 (457)
+..++-...+. ..|.+.. ---++-+||.|++++++=
T Consensus 190 d~VivGAd~v~-~nG~v~nkiGT~~~A~~Ak~~~vPv~V~ 228 (310)
T PRK08535 190 DKVVVGADAIT-ANGAVINKIGTSQIALAAHEARVPFMVA 228 (310)
T ss_pred CEEEECccEEe-cCCCEEeHHhHHHHHHHHHHhCCCEEEe
Confidence 22233333332 3454444 335777889999988863
No 402
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=65.91 E-value=45 Score=30.14 Aligned_cols=63 Identities=16% Similarity=0.182 Sum_probs=38.1
Q ss_pred HHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEE
Q 040741 163 CRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHT 231 (457)
Q Consensus 163 ~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~ 231 (457)
...++..|++++..+.+ |.+.|.++++.-..++++....+ .....--..+++.|++.|+..++
T Consensus 37 ~~~l~~~g~~vv~~d~~-----~~~~l~~al~g~d~v~~~~~~~~-~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 37 AQQLQALGAEVVEADYD-----DPESLVAALKGVDAVFSVTPPSH-PSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp HHHHHHTTTEEEES-TT------HHHHHHHHTTCSEEEEESSCSC-CCHHHHHHHHHHHHHHHT-SEEE
T ss_pred hhhhhcccceEeecccC-----CHHHHHHHHcCCceEEeecCcch-hhhhhhhhhHHHhhhccccceEE
Confidence 34445569988766655 89999999997666666655433 12222245678888887665443
No 403
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=64.65 E-value=4.4 Score=41.86 Aligned_cols=164 Identities=14% Similarity=0.137 Sum_probs=100.8
Q ss_pred HHHHHHHHhCCCCCc--EEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCc--chHHHHHHHHhcCcEEEEEeCC-C
Q 040741 106 ARSQIADLIGASPKE--IIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHK--CVLDSCRHLQQEGFEITYLPVG-A 180 (457)
Q Consensus 106 ~~~~la~~~g~~~~~--i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~--~~~~~~~~~~~~G~~v~~v~~~-~ 180 (457)
++..+-.+++.+.++ +++|.+-..|.-+.+..... +-... +..-..|+ ++....+.++..|+.+.-.-.. +
T Consensus 181 ik~ri~d~L~ipe~~y~lldtaSrvSaf~Ldaesy~f---~~~~~-lltiFgyetgAvlv~~r~A~~~Ggkt~sa~f~wp 256 (728)
T KOG2142|consen 181 IKLRIMDRLNIPESEYVLLDTASRVSAFPLDAESYPF---DFNPK-LLTIFGYETGAVLVMNRSAELKGGKTASAEFSWP 256 (728)
T ss_pred eeeeeecccccCCceEEEEEeecccccccchHhhCCC---cccch-heeecCCCchhhHHHhhhhHhhcCccceeecccc
Confidence 566667777776554 88888877777776665543 21222 43334444 4444445555556655433222 2
Q ss_pred CCCCCHHHHHHhcCCCc--------eEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCcc---cCCCCcc
Q 040741 181 DGIVNLDELRAAIRPDT--------GLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPV---DVEKWNV 249 (457)
Q Consensus 181 ~~~~d~~~le~~i~~~t--------~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~---~~~~~~~ 249 (457)
...+.-+++++.+.+.| -+..++...--||..+++... .++.+.+.++.+|.-+- |.... +...+.+
T Consensus 257 ~~~l~s~~lkkr~e~gk~~~kd~a~gl~vFp~~sRvtG~~ysy~wm-t~al~~~whvlLda~~l-G~kdmd~yglS~f~P 334 (728)
T KOG2142|consen 257 MLYLLSEKLKKRFEDGKLRFKDIAQGLFVFPTQSRVTGGMYSYSWM-TLALANNWHVLLDALAL-GPKDMDSYGLSLFQP 334 (728)
T ss_pred hHHHHHHHHHHHHhhccccccchhhheeccchHhhhcccchhHHHH-HHHHhhhHHHHHhhhcc-CcchHhhhhhhccCc
Confidence 22333467788776543 244556555558999988775 56777788888897665 33222 2223358
Q ss_pred cEEEeccccccC---CCCceEEEEecCCC
Q 040741 250 SLMSLSGHKIYG---PKGVGALYMRRRPR 275 (457)
Q Consensus 250 Di~~~s~~K~~g---~~G~G~l~~~~~~~ 275 (457)
|+...++++.+| |.|.|++.+++-.+
T Consensus 335 dfqg~sf~fv~g~d~psgfGcl~VkKs~i 363 (728)
T KOG2142|consen 335 DFQGPSFYFVFGRDDPSGFGCLEVKKSAI 363 (728)
T ss_pred cceeeeEEEEeccCCCCceeeeeeehhhh
Confidence 999999999776 55799999887543
No 404
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=61.77 E-value=1.5e+02 Score=28.28 Aligned_cols=102 Identities=19% Similarity=0.317 Sum_probs=55.5
Q ss_pred CcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCC--CCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC-
Q 040741 119 KEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQT--EHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP- 195 (457)
Q Consensus 119 ~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~--~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~- 195 (457)
..+++|.|.+......++.... .++.-+|++.+. ...+ ...++.+...|+++++++-. .+-..+..
T Consensus 116 g~~ILT~~~S~tv~~~l~~a~~--~~~~f~V~v~EsrP~~~G-~~~a~~L~~~gI~vtlI~Ds--------a~~~~m~~v 184 (301)
T TIGR00511 116 GDVVMTHCNSEAALSVIKTAFE--QGKDIEVIATETRPRKQG-HITAKELRDYGIPVTLIVDS--------AVRYFMKEV 184 (301)
T ss_pred CCEEEEECCcHHHHHHHHHHHH--cCCcEEEEEecCCCcchH-HHHHHHHHHCCCCEEEEehh--------HHHHHHHhC
Confidence 3478888766555555544332 134556776553 3334 33345566779999998733 11112222
Q ss_pred CceEEEEeccccccccccC---hHHHHHHHHhcCCcEEEe
Q 040741 196 DTGLISVMAVNNEIGVIQP---MEEIGQICKEFKIPFHTD 232 (457)
Q Consensus 196 ~t~li~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D 232 (457)
+..++-...+.. .|.+.. --.++-.||.+++++++=
T Consensus 185 d~VivGad~v~~-nG~v~nkiGT~~lA~~Ak~~~vPv~V~ 223 (301)
T TIGR00511 185 DHVVVGADAITA-NGALINKIGTSQLALAAREARVPFMVA 223 (301)
T ss_pred CEEEECccEEec-CCCEEEHHhHHHHHHHHHHhCCCEEEE
Confidence 223333344432 344433 335777889999988863
No 405
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=60.93 E-value=1.6e+02 Score=28.21 Aligned_cols=104 Identities=16% Similarity=0.259 Sum_probs=55.1
Q ss_pred CcEEEeCChH--------HHHHHHHHHhhhhhcCCCCEEEEcC--CCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHH
Q 040741 119 KEIIFTSGAT--------ESNNVSIKGVMHFYKDKKRHVITTQ--TEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDE 188 (457)
Q Consensus 119 ~~i~~t~g~T--------~a~~~al~~~~~~~~~~g~~vi~~~--~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~ 188 (457)
.++++|.+.+ ......++.... .++.-+|++.+ +.+.+....++.+...|+++++++.. .
T Consensus 119 g~~ILT~~~Sg~lat~~~~tv~~~l~~A~~--~g~~~~V~v~EsrP~~~G~~~~a~~L~~~gI~vtlI~Ds--------a 188 (303)
T TIGR00524 119 GDTVLTHCNAGALATSDYGTALGVIRSAWE--DGKRIRVIACETRPRNQGSRLTAWELMQDGIDVTLITDS--------M 188 (303)
T ss_pred CCEEEEecCCccccccCcchHHHHHHHHHH--cCCceEEEECCCCCccchHHHHHHHHHHCCCCEEEEChh--------H
Confidence 3478887755 222223333221 13456677654 44444334456666789999998633 1
Q ss_pred HHHhcC--C-CceEEEEeccccccccccC--hHHHHHHHHhcCCcEEEe
Q 040741 189 LRAAIR--P-DTGLISVMAVNNEIGVIQP--MEEIGQICKEFKIPFHTD 232 (457)
Q Consensus 189 le~~i~--~-~t~li~i~~~~~~~G~~~~--l~~i~~l~~~~~v~li~D 232 (457)
+-..+. . +..++-...+....|.+.. --.++-+||.+++++++=
T Consensus 189 ~~~~m~~~~vd~VlvGAd~v~~nG~v~nk~GT~~lA~~Ak~~~vPv~V~ 237 (303)
T TIGR00524 189 AAYFMQKGEIDAVIVGADRIARNGDVANKIGTYQLAVLAKEFRIPFFVA 237 (303)
T ss_pred HHHHccccCCCEEEEcccEEecCCCEeEhhhHHHHHHHHHHhCCCEEEe
Confidence 222333 1 2233334444333334433 345777889999998864
No 406
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=58.61 E-value=16 Score=31.26 Aligned_cols=50 Identities=20% Similarity=0.336 Sum_probs=41.0
Q ss_pred CHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhc--CCcEEEehhhhcCC
Q 040741 185 NLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEF--KIPFHTDAAQALGK 239 (457)
Q Consensus 185 d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~--~v~li~D~a~~~g~ 239 (457)
|.++++++++.+..++++- +|.+..++++.+..++. .+++|+|-..++..
T Consensus 12 ~~~~le~~les~~~~vflL-----~~~i~~ik~ivk~lK~~gK~vfiHvDLv~Gl~~ 63 (181)
T COG1954 12 DNKDLEKALESESQYVFLL-----TGHILNIKEIVKKLKNRGKTVFIHVDLVEGLSN 63 (181)
T ss_pred hHHHHHHHhcCCCeEEEEE-----echhhhHHHHHHHHHhCCcEEEEEeHHhcccCC
Confidence 6788999998887766653 67889999999999987 58899999988763
No 407
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=57.75 E-value=24 Score=27.72 Aligned_cols=50 Identities=16% Similarity=0.154 Sum_probs=41.2
Q ss_pred CCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEeh
Q 040741 182 GIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDA 233 (457)
Q Consensus 182 ~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~ 233 (457)
..+++++++..+.+++..|++.... +|.+.-.++..+++++.++-+++--
T Consensus 47 Hkl~~eEle~~lee~~E~ivvGTG~--~G~l~l~~ea~e~~r~k~~~vi~~p 96 (121)
T COG1504 47 HKLALEELEELLEEGPEVIVVGTGQ--SGMLELSEEAREFFRKKGCEVIELP 96 (121)
T ss_pred cccCHHHHHHHHhcCCcEEEEecCc--eeEEEeCHHHHHHHHhcCCeEEEeC
Confidence 3689999999999999888886554 7888888999999999997777543
No 408
>COG0656 ARA1 Aldo/keto reductases, related to diketogulonate reductase [General function prediction only]
Probab=56.43 E-value=1.5e+02 Score=27.96 Aligned_cols=142 Identities=15% Similarity=0.137 Sum_probs=72.0
Q ss_pred HHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCC----------hHHHHHHHHHHhhhhh
Q 040741 73 VLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSG----------ATESNNVSIKGVMHFY 142 (457)
Q Consensus 73 v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g----------~T~a~~~al~~~~~~~ 142 (457)
..+++...+..-+..-+. ... |+.++.+. +.+++ -|++-+++++|+= .-.|++..++-+..
T Consensus 30 ~~~av~~Al~~Gyr~IDT-A~~--YgnE~~VG---~aI~~-s~v~ReelFittKvw~~~~~~~~~~~a~e~Sl~rLg~-- 100 (280)
T COG0656 30 AVRAVRAALELGYRLIDT-AEI--YGNEEEVG---EAIKE-SGVPREELFITTKVWPSDLGYDETLKALEASLKRLGL-- 100 (280)
T ss_pred HHHHHHHHHHhCcceEec-HhH--hcCHHHHH---HHHHh-cCCCHHHeEEEeecCCccCCcchHHHHHHHHHHHhCC--
Confidence 667777766543222121 112 22334444 34444 5555556776642 12233333332221
Q ss_pred cCCCCEEEEcCCC---Cc---chHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChH
Q 040741 143 KDKKRHVITTQTE---HK---CVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPME 216 (457)
Q Consensus 143 ~~~g~~vi~~~~~---h~---~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~ 216 (457)
.-=|..++.-+. +. ..+.+...+...| .+..+.+.. ++.+.|+++++.......+.. ..+.-..+-+
T Consensus 101 -dyvDLyLiHwP~~~~~~~~~etw~alE~l~~~G-~ir~IGVSN---F~~~~L~~l~~~~~~~p~~NQ--Ie~hp~~~q~ 173 (280)
T COG0656 101 -DYVDLYLIHWPVPNKYVVIEETWKALEELVDEG-LIRAIGVSN---FGVEHLEELLSLAKVKPAVNQ--IEYHPYLRQP 173 (280)
T ss_pred -CceeEEEECCCCCccCccHHHHHHHHHHHHhcC-CccEEEeeC---CCHHHHHHHHHhcCCCCceEE--EEeccCCCcH
Confidence 223566665543 33 3444444444445 667777663 367777777765322222222 2344556677
Q ss_pred HHHHHHHhcCCcEE
Q 040741 217 EIGQICKEFKIPFH 230 (457)
Q Consensus 217 ~i~~l~~~~~v~li 230 (457)
++.++|+++|+.+.
T Consensus 174 el~~~~~~~gI~v~ 187 (280)
T COG0656 174 ELLPFCQRHGIAVE 187 (280)
T ss_pred HHHHHHHHcCCEEE
Confidence 79999999988665
No 409
>PF04309 G3P_antiterm: Glycerol-3-phosphate responsive antiterminator; InterPro: IPR006699 Glycerol enters bacterial cells via facilitated diffusion, an energy-independent transport process catalysed by the glycerol transport facilitator GlpF, an integral membrane protein of the aquaporin family. Intracellular glycerol is usually converted to glycerol-3-P in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK). Glycerol-3-P, the inducer of the glpFK operon, is not a substrate for GlpF and hence remains entrapped in the cell where it is metabolized further. In some bacterial species, for example Bacillus firmus, glycerol-3-P activates the antiterminator GlpP []. In B. subtilis, glpF and glpK are organised in an operon followed by the glycerol-3-P dehydrogenase-encoding glpD gene and preceded by glpP coding for an antiterminator regulating the expression of glpFK, glpD and glpTQ. Their induction requires the inducer glycerol-3-P, which activates the antiterminator GlpP by allowing it to bind to the leader region of glpD and presumably also of glpFK and glpTQ mRNAs.; GO: 0006355 regulation of transcription, DNA-dependent, 0009607 response to biotic stimulus; PDB: 1VKF_A 3KTS_G.
Probab=56.27 E-value=5.4 Score=34.58 Aligned_cols=52 Identities=19% Similarity=0.309 Sum_probs=39.2
Q ss_pred CHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcC--CcEEEehhhhcCCCc
Q 040741 185 NLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFK--IPFHTDAAQALGKIP 241 (457)
Q Consensus 185 d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~--v~li~D~a~~~g~~~ 241 (457)
+.++++.+++.+...+++. +|.+..++++.+.++++| +++|+|-..+++.-.
T Consensus 8 ~~~~l~~al~s~~~~vfLl-----~g~I~~l~~~v~~~~~~gK~vfVHiDli~Gl~~D~ 61 (175)
T PF04309_consen 8 DEEDLEKALESDVEVVFLL-----TGDIGNLKDIVKRLKAAGKKVFVHIDLIEGLSRDE 61 (175)
T ss_dssp CCCCCCCCCCSSSSEEEE------SEECCCHHHHHHHHHHTT-EEEEECCGEETB-SSH
T ss_pred CHHHHHHHHcCCCCEEEEE-----cCcHHHHHHHHHHHHHcCCEEEEEehhcCCCCCCH
Confidence 4556777777666666664 578899999999999985 888899998877553
No 410
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=54.74 E-value=1.5e+02 Score=26.18 Aligned_cols=125 Identities=16% Similarity=0.181 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCC--hHHHHHHHHHHhhhhhcC----CCCEEEEcCC--CCcc--hHHHHHHHHhcC
Q 040741 101 VAVETARSQIADLIGASPKEIIFTSG--ATESNNVSIKGVMHFYKD----KKRHVITTQT--EHKC--VLDSCRHLQQEG 170 (457)
Q Consensus 101 ~~~~~~~~~la~~~g~~~~~i~~t~g--~T~a~~~al~~~~~~~~~----~g~~vi~~~~--~h~~--~~~~~~~~~~~G 170 (457)
+....+-+.+.+++.... +.+..= +++.+..++..+...... .+.+|++... +... .......++..|
T Consensus 33 ~~l~p~m~~vG~~w~~~~--i~va~e~~as~~~~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G 110 (201)
T cd02070 33 EGLAPGMDIVGDKYEEGE--IFVPELLMAADAMKAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANG 110 (201)
T ss_pred HHHHHHHHHHHHHHccCC--eeHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCC
Confidence 445555556666665432 322211 444555555544433221 2335544322 2222 223344567889
Q ss_pred cEEEEEeCCCCCCCCHHHHHHhc-CCCceEEEEeccccccccccChHHHHHHHHhc----CCcEEEeh
Q 040741 171 FEITYLPVGADGIVNLDELRAAI-RPDTGLISVMAVNNEIGVIQPMEEIGQICKEF----KIPFHTDA 233 (457)
Q Consensus 171 ~~v~~v~~~~~~~~d~~~le~~i-~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~----~v~li~D~ 233 (457)
++++++..+ +.++++.+++ ..++.+|.++...+ .....++++.+..++. ++.+++=+
T Consensus 111 ~~vi~lG~~----~p~~~l~~~~~~~~~d~v~lS~~~~--~~~~~~~~~i~~lr~~~~~~~~~i~vGG 172 (201)
T cd02070 111 FEVIDLGRD----VPPEEFVEAVKEHKPDILGLSALMT--TTMGGMKEVIEALKEAGLRDKVKVMVGG 172 (201)
T ss_pred CEEEECCCC----CCHHHHHHHHHHcCCCEEEEecccc--ccHHHHHHHHHHHHHCCCCcCCeEEEEC
Confidence 999887644 4567776665 45677888876532 3345577777777765 34555544
No 411
>smart00642 Aamy Alpha-amylase domain.
Probab=53.32 E-value=28 Score=29.94 Aligned_cols=73 Identities=10% Similarity=0.107 Sum_probs=42.7
Q ss_pred chHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhh
Q 040741 158 CVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQ 235 (457)
Q Consensus 158 ~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~ 235 (457)
....-+.+++..|++.+++..-...... ..-...-...-...++...|...+++++++-||++|+.+++|-+.
T Consensus 20 gi~~~l~yl~~lG~~~I~l~Pi~~~~~~-----~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~ 92 (166)
T smart00642 20 GIIEKLDYLKDLGVTAIWLSPIFESPQG-----YPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVVI 92 (166)
T ss_pred HHHHHHHHHHHCCCCEEEECcceeCCCC-----CCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 3344445667778888877543111000 000001111222223335788889999999999999999999874
No 412
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=53.16 E-value=2.6e+02 Score=28.40 Aligned_cols=106 Identities=15% Similarity=0.202 Sum_probs=62.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcC-CCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC
Q 040741 117 SPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQ-TEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP 195 (457)
Q Consensus 117 ~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~-~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~ 195 (457)
...++++|-|.+..++..+.-... .+..-..|+|+. +..-+. ...+.+...|+++.|+-++.- ..+ +.+
T Consensus 358 ~dgdviltyg~s~vV~~ill~A~~-~~k~frVvVVDSRP~~EG~-~~lr~Lv~~GinctYv~I~a~-----syi---m~e 427 (556)
T KOG1467|consen 358 QDGDVLLTYGSSSVVNMILLEAKE-LGKKFRVVVVDSRPNLEGR-KLLRRLVDRGINCTYVLINAA-----SYI---MLE 427 (556)
T ss_pred hcCCEEEEecchHHHHHHHHHHHH-hCcceEEEEEeCCCCcchH-HHHHHHHHcCCCeEEEEehhH-----HHH---HHh
Confidence 344588888877777766654221 112223445544 344333 345666777999999987621 111 233
Q ss_pred CceEEEEeccccccccccC---hHHHHHHHHhcCCcEEEe
Q 040741 196 DTGLISVMAVNNEIGVIQP---MEEIGQICKEFKIPFHTD 232 (457)
Q Consensus 196 ~t~li~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~D 232 (457)
-++++.=.|---..|.++. -.-|+-.++.|++++++=
T Consensus 428 vtkvfLGahailsNG~vysR~GTa~valvAna~nVPVlVC 467 (556)
T KOG1467|consen 428 VTKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVC 467 (556)
T ss_pred cceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEE
Confidence 4555554444444677776 345666788899998864
No 413
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=52.53 E-value=44 Score=27.35 Aligned_cols=57 Identities=23% Similarity=0.267 Sum_probs=40.3
Q ss_pred HHHhcCcEEEEEeCCCCCCCCHHHH-HHhcCCCceEEEEeccccccccccChHHHHHHHHhcCC
Q 040741 165 HLQQEGFEITYLPVGADGIVNLDEL-RAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKI 227 (457)
Q Consensus 165 ~~~~~G~~v~~v~~~~~~~~d~~~l-e~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v 227 (457)
.++..|++|+.+..+ ..++++ +++++.+..+|.++... +.....++++.+.+++.++
T Consensus 22 ~L~~~GfeVidLG~~----v~~e~~v~aa~~~~adiVglS~L~--t~~~~~~~~~~~~l~~~gl 79 (128)
T cd02072 22 AFTEAGFNVVNLGVL----SPQEEFIDAAIETDADAILVSSLY--GHGEIDCKGLREKCDEAGL 79 (128)
T ss_pred HHHHCCCEEEECCCC----CCHHHHHHHHHHcCCCEEEEeccc--cCCHHHHHHHHHHHHHCCC
Confidence 446779999998776 345554 55566788888887663 4455568888888888743
No 414
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=52.40 E-value=2.4e+02 Score=27.64 Aligned_cols=120 Identities=12% Similarity=0.055 Sum_probs=68.8
Q ss_pred HHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCH
Q 040741 107 RSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNL 186 (457)
Q Consensus 107 ~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~ 186 (457)
.+.+++-+|.+ ++-+.-....+..+... -|.+-+...+-..+. -.+.+...| +++.++.. -..++
T Consensus 157 L~~~~~e~Gl~---~~tev~d~~~v~~~~~~--------~d~lqIga~~~~n~~-LL~~va~t~-kPVllk~G--~~~t~ 221 (352)
T PRK13396 157 LAAAREATGLG---IITEVMDAADLEKIAEV--------ADVIQVGARNMQNFS-LLKKVGAQD-KPVLLKRG--MAATI 221 (352)
T ss_pred HHHHHHHcCCc---EEEeeCCHHHHHHHHhh--------CCeEEECcccccCHH-HHHHHHccC-CeEEEeCC--CCCCH
Confidence 33456667775 55555555556554332 355555554433322 234443334 34444422 22377
Q ss_pred HHHHHhcC-----CCceEEEEec-----cccccccccChHHHHHHHHhcCCcEEEehhhhcCCCc
Q 040741 187 DELRAAIR-----PDTGLISVMA-----VNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIP 241 (457)
Q Consensus 187 ~~le~~i~-----~~t~li~i~~-----~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~ 241 (457)
++++.+++ -+..++.+.. .+..+-...++..|..+.+.+++++++|.+|+.|...
T Consensus 222 ee~~~A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~sd 286 (352)
T PRK13396 222 DEWLMAAEYILAAGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGKSE 286 (352)
T ss_pred HHHHHHHHHHHHcCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCcHH
Confidence 77776653 2455665544 2122235577999999988889999999999987553
No 415
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=51.30 E-value=66 Score=25.48 Aligned_cols=68 Identities=19% Similarity=0.288 Sum_probs=46.6
Q ss_pred HHHHHhcCcEEEEEeCCCCCCCCHHHHHHhc-CCCceEEEEeccccccccccChHHHHHHHHhc--CCcEEEehhhh
Q 040741 163 CRHLQQEGFEITYLPVGADGIVNLDELRAAI-RPDTGLISVMAVNNEIGVIQPMEEIGQICKEF--KIPFHTDAAQA 236 (457)
Q Consensus 163 ~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i-~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~--~v~li~D~a~~ 236 (457)
+..++..|.++..++.+ .+.+++.+.+ +.++.+|.++... +.......++++..|+. ++.+++=+.+.
T Consensus 21 a~~l~~~G~~v~~~d~~----~~~~~l~~~~~~~~pd~V~iS~~~--~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~ 91 (121)
T PF02310_consen 21 AAYLRKAGHEVDILDAN----VPPEELVEALRAERPDVVGISVSM--TPNLPEAKRLARAIKERNPNIPIVVGGPHA 91 (121)
T ss_dssp HHHHHHTTBEEEEEESS----B-HHHHHHHHHHTTCSEEEEEESS--STHHHHHHHHHHHHHTTCTTSEEEEEESSS
T ss_pred HHHHHHCCCeEEEECCC----CCHHHHHHHHhcCCCcEEEEEccC--cCcHHHHHHHHHHHHhcCCCCEEEEECCch
Confidence 44557789999999876 3457776655 4567788776532 34445567787777776 78888877663
No 416
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=50.72 E-value=2.1e+02 Score=26.65 Aligned_cols=81 Identities=11% Similarity=0.241 Sum_probs=52.5
Q ss_pred CCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccC----hHHHHHH
Q 040741 146 KRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQP----MEEIGQI 221 (457)
Q Consensus 146 g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~----l~~i~~l 221 (457)
-+-+|+++.-..-.......++..|++.+++-.... +.+.+++..+.....++....+.-||...+ ++++.+-
T Consensus 123 vdGlivpDLP~ee~~~~~~~~~~~gi~~I~lvaPtt---~~~rl~~i~~~a~GFiY~vs~~GvTG~~~~~~~~~~~~v~~ 199 (265)
T COG0159 123 VDGLLVPDLPPEESDELLKAAEKHGIDPIFLVAPTT---PDERLKKIAEAASGFIYYVSRMGVTGARNPVSADVKELVKR 199 (265)
T ss_pred CCEEEeCCCChHHHHHHHHHHHHcCCcEEEEeCCCC---CHHHHHHHHHhCCCcEEEEecccccCCCcccchhHHHHHHH
Confidence 377888776655555556666778999887754422 456666666655566666666666898876 5666666
Q ss_pred HHhc-CCcE
Q 040741 222 CKEF-KIPF 229 (457)
Q Consensus 222 ~~~~-~v~l 229 (457)
.|++ ++++
T Consensus 200 vr~~~~~Pv 208 (265)
T COG0159 200 VRKYTDVPV 208 (265)
T ss_pred HHHhcCCCe
Confidence 6665 4444
No 417
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=49.84 E-value=2.6e+02 Score=27.27 Aligned_cols=124 Identities=13% Similarity=0.103 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHhCC--C-CCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchH---HHHHHHHhcCcEEEE
Q 040741 102 AVETARSQIADLIGA--S-PKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVL---DSCRHLQQEGFEITY 175 (457)
Q Consensus 102 ~~~~~~~~la~~~g~--~-~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~---~~~~~~~~~G~~v~~ 175 (457)
...++++.+.++-+. . .+-++..|||-.+..++...... + +-...+++-+..+.+-. .+.+.++..|++...
T Consensus 41 ~~~~l~~l~~~~k~~~~~~yD~iV~lSGGkDSs~la~ll~~~-~-gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~ 118 (343)
T TIGR03573 41 REKELEELVDKIKKKGGGRYDCIIGVSGGKDSTYQAHVLKKK-L-GLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHT 118 (343)
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHHH-h-CCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEE
Confidence 344455555554432 1 45688899988887665333221 1 11222233333333221 333444556888887
Q ss_pred EeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhh
Q 040741 176 LPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQA 236 (457)
Q Consensus 176 v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~ 236 (457)
+.++ .+.+......... -...+..+.. ......+.++|+++|+.+++.+..+
T Consensus 119 i~~d------~~~~~~l~~~~~~--~~~~pc~~c~-~~~~~~l~~~A~~~gi~~Il~G~~~ 170 (343)
T TIGR03573 119 ITIN------PETFRKLQRAYFK--KVGDPEWPQD-HAIFASVYQVALKFNIPLIIWGENI 170 (343)
T ss_pred EeCC------HHHHHHHHHHHHh--ccCCCchhhh-hHHHHHHHHHHHHhCCCEEEeCCCH
Confidence 7754 3333222211110 0111111111 1225678889999999999998765
No 418
>TIGR03772 anch_rpt_subst anchored repeat ABC transporter, substrate-binding protein. Members of this protein family are ABC transporter permease subunits as identified by pfam00950, but additionally contain the Actinobacterial insert domain described by TIGR03769. Some homologs (lacking the insert) have been described as transporters of manganese or of chelated iron. Members of this family typically are found along with an ATP-binding cassette protein, a permease, and an LPXTG-anchored protein with two or three copies of the TIGR03769 insert that occurs just once in this protein family.
Probab=49.14 E-value=1.6e+02 Score=30.25 Aligned_cols=74 Identities=15% Similarity=0.157 Sum_probs=44.3
Q ss_pred CCCEEEEcCCCCcchHHHHHHHHhcCcEEEE-EeCCCCCCCCHHHHHHhc---C-CCceEEEEeccccccccccChHHHH
Q 040741 145 KKRHVITTQTEHKCVLDSCRHLQQEGFEITY-LPVGADGIVNLDELRAAI---R-PDTGLISVMAVNNEIGVIQPMEEIG 219 (457)
Q Consensus 145 ~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~-v~~~~~~~~d~~~le~~i---~-~~t~li~i~~~~~~~G~~~~l~~i~ 219 (457)
++..+++ .|+++...++.+ |+++.. +.++.+..+.+.+|.+++ + .+.++|+++...+. ..+.+.
T Consensus 370 k~r~vvt---~H~af~YLa~~Y---GL~~~~~~~~~~~~ePS~~~L~~Li~~IK~~~V~~IF~Epq~~~-----~~~~l~ 438 (479)
T TIGR03772 370 SRRHLIT---THDAYSYLGQAY---GLNIAGFVTPNPAVEPSLADRRRLTRTIENLKVPAVFLEPNLAA-----RSTTLN 438 (479)
T ss_pred cCCEEEE---ECCcHHHHHHHC---CCeEEeeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCC-----chHHHH
Confidence 4566777 455554444444 888764 334455566666666554 3 45667776654332 244577
Q ss_pred HHHHhcCCcE
Q 040741 220 QICKEFKIPF 229 (457)
Q Consensus 220 ~l~~~~~v~l 229 (457)
.++++.|+.+
T Consensus 439 ~IA~e~Gv~V 448 (479)
T TIGR03772 439 EIADELGVRV 448 (479)
T ss_pred HHHHHcCCcE
Confidence 7889888865
No 419
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=49.10 E-value=52 Score=27.19 Aligned_cols=58 Identities=22% Similarity=0.259 Sum_probs=40.9
Q ss_pred HHHHhcCcEEEEEeCCCCCCCCHHHH-HHhcCCCceEEEEeccccccccccChHHHHHHHHhcCC
Q 040741 164 RHLQQEGFEITYLPVGADGIVNLDEL-RAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKI 227 (457)
Q Consensus 164 ~~~~~~G~~v~~v~~~~~~~~d~~~l-e~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v 227 (457)
..++..|++|+.+..+ ..++++ +++.+.+..+|.++... +.....++++.+.+++.++
T Consensus 23 ~~l~~~GfeVi~LG~~----v~~e~~v~aa~~~~adiVglS~l~--~~~~~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 23 HAFTNAGFNVVNLGVL----SPQEEFIKAAIETKADAILVSSLY--GHGEIDCKGLRQKCDEAGL 81 (134)
T ss_pred HHHHHCCCEEEECCCC----CCHHHHHHHHHHcCCCEEEEeccc--ccCHHHHHHHHHHHHHCCC
Confidence 4557789999998766 345654 44556778888887664 3344558889988888754
No 420
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=48.89 E-value=2.3e+02 Score=26.46 Aligned_cols=84 Identities=11% Similarity=0.105 Sum_probs=53.9
Q ss_pred CCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccC----hHHHHHH
Q 040741 146 KRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQP----MEEIGQI 221 (457)
Q Consensus 146 g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~----l~~i~~l 221 (457)
-+-|++++..+.-.......++..|...+.+=.+.. ..+.++...+....+|++......||.... ++++.+.
T Consensus 120 vdgviipDLP~ee~~~~~~~~~~~gi~~I~lv~PtT---~~eri~~i~~~a~gFIY~vS~~GvTG~~~~~~~~~~~~i~~ 196 (263)
T CHL00200 120 VKGLIIPDLPYEESDYLISVCNLYNIELILLIAPTS---SKSRIQKIARAAPGCIYLVSTTGVTGLKTELDKKLKKLIET 196 (263)
T ss_pred CeEEEecCCCHHHHHHHHHHHHHcCCCEEEEECCCC---CHHHHHHHHHhCCCcEEEEcCCCCCCCCccccHHHHHHHHH
Confidence 377888877665555556666778988876643321 456676666655557776666666887532 5666666
Q ss_pred HHhc-CCcEEEe
Q 040741 222 CKEF-KIPFHTD 232 (457)
Q Consensus 222 ~~~~-~v~li~D 232 (457)
.|++ +.++.+|
T Consensus 197 ir~~t~~Pi~vG 208 (263)
T CHL00200 197 IKKMTNKPIILG 208 (263)
T ss_pred HHHhcCCCEEEE
Confidence 6665 6767663
No 421
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=48.40 E-value=1.9e+02 Score=27.59 Aligned_cols=122 Identities=15% Similarity=0.145 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCC--CcchHHHHHHHHhcCcEEEEEeC
Q 040741 101 VAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTE--HKCVLDSCRHLQQEGFEITYLPV 178 (457)
Q Consensus 101 ~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~--h~~~~~~~~~~~~~G~~v~~v~~ 178 (457)
....+++-.+.+-+--.. .-++|-||..+|..-.-+.......=++..++...+ |.-+ .........|+.++.++.
T Consensus 47 NK~RKLefll~eal~~g~-dTlvT~GgiQSNh~r~tAavA~~lGl~~v~ile~~~~~y~~n-gn~Ll~~l~G~~~~~~~~ 124 (323)
T COG2515 47 NKIRKLEFLLGEALRKGA-DTLVTYGGIQSNHVRQTAAVAAKLGLKCVLILENIEANYLLN-GNLLLSKLMGAEVRAVDA 124 (323)
T ss_pred cHHHHHHHHHhhhhhcCC-cEEEEecccchhHHHHHHHHHHhcCCcEEEEEeccccccccc-cchhhhhhcCceEEEecC
Confidence 355667777766654333 388999999998775554443211224445554444 1111 112222445999999987
Q ss_pred CCCC--CCCHHHHHHhcC--CCceEEEEeccccccccc---cChHHHHHHHHh
Q 040741 179 GADG--IVNLDELRAAIR--PDTGLISVMAVNNEIGVI---QPMEEIGQICKE 224 (457)
Q Consensus 179 ~~~~--~~d~~~le~~i~--~~t~li~i~~~~~~~G~~---~~l~~i~~l~~~ 224 (457)
..+. ....+.+.+-++ .++..++.+...|+.|.. .-..||.+-+++
T Consensus 125 ~~d~~~~~~~~~~~e~~~~~g~kpyvIp~GG~~~~g~lGyv~~a~Ei~~Q~~~ 177 (323)
T COG2515 125 GTDIGINASAEELAEEVRKQGGKPYVIPEGGSSPLGALGYVRLALEIAEQAEQ 177 (323)
T ss_pred CCChhhchhhHHHHHHHHhcCCCCcEeccCCcCccccccHHHHHHHHHHHHhh
Confidence 6554 233455554443 234566666667775544 446677777776
No 422
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=47.95 E-value=95 Score=27.53 Aligned_cols=41 Identities=10% Similarity=0.093 Sum_probs=31.4
Q ss_pred HHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEE
Q 040741 187 DELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHT 231 (457)
Q Consensus 187 ~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~ 231 (457)
.+++...+++..++.++. +|...++-++++++|++|+.+|.
T Consensus 101 ~ql~~~~~~gDvli~iS~----SG~s~~v~~a~~~Ak~~G~~vI~ 141 (196)
T PRK10886 101 KQVRALGHAGDVLLAIST----RGNSRDIVKAVEAAVTRDMTIVA 141 (196)
T ss_pred HHHHHcCCCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCEEEE
Confidence 556666677777777755 67778899999999999887764
No 423
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=47.26 E-value=2.3e+02 Score=26.01 Aligned_cols=95 Identities=15% Similarity=0.142 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEE---eCCCC---CCCCHHHHHHhcC----CC
Q 040741 127 ATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYL---PVGAD---GIVNLDELRAAIR----PD 196 (457)
Q Consensus 127 ~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v---~~~~~---~~~d~~~le~~i~----~~ 196 (457)
.+.|+..+++.+. -+...+++++...-.....++++..|++|+.+ ....+ +.++++.+.+++. ++
T Consensus 107 ~~~A~~~AL~alg-----~~RIalvTPY~~~v~~~~~~~l~~~G~eV~~~~~~~~~~~~~ia~i~p~~i~~~~~~~~~~~ 181 (239)
T TIGR02990 107 PSSAAVDGLAALG-----VRRISLLTPYTPETSRPMAQYFAVRGFEIVNFTCLGLTDDREMARISPDCIVEAALAAFDPD 181 (239)
T ss_pred HHHHHHHHHHHcC-----CCEEEEECCCcHHHHHHHHHHHHhCCcEEeeeeccCCCCCceeeecCHHHHHHHHHHhcCCC
Confidence 4556666677654 45555666655444444566778889999876 33222 3688888888764 45
Q ss_pred ceEEEEeccccccccccChHHHHHHHHhcCCcEEE
Q 040741 197 TGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHT 231 (457)
Q Consensus 197 t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~ 231 (457)
...|+++..+-. -++-|.++=++.|.+++.
T Consensus 182 aDAifisCTnLr-----t~~vi~~lE~~lGkPVls 211 (239)
T TIGR02990 182 ADALFLSCTALR-----AATCAQRIEQAIGKPVVT 211 (239)
T ss_pred CCEEEEeCCCch-----hHHHHHHHHHHHCCCEEE
Confidence 666776644321 233444455667888853
No 424
>COG3019 Predicted metal-binding protein [General function prediction only]
Probab=47.03 E-value=1.6e+02 Score=24.51 Aligned_cols=73 Identities=19% Similarity=0.303 Sum_probs=50.8
Q ss_pred CCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC-------CceEEEEeccccccccccChHH
Q 040741 145 KKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP-------DTGLISVMAVNNEIGVIQPMEE 217 (457)
Q Consensus 145 ~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~-------~t~li~i~~~~~~~G~~~~l~~ 217 (457)
.-..++.-+++..|...-+++++..|++|..+..+ |++.+++.+.- .|.+| .....-| -.|.++
T Consensus 25 ~~~~~vyksPnCGCC~~w~~~mk~~Gf~Vk~~~~~-----d~~alK~~~gIp~e~~SCHT~VI---~Gy~vEG-HVPa~a 95 (149)
T COG3019 25 ATEMVVYKSPNCGCCDEWAQHMKANGFEVKVVETD-----DFLALKRRLGIPYEMQSCHTAVI---NGYYVEG-HVPAEA 95 (149)
T ss_pred eeeEEEEeCCCCccHHHHHHHHHhCCcEEEEeecC-----cHHHHHHhcCCChhhccccEEEE---cCEEEec-cCCHHH
Confidence 34556777888999999899999999999999877 88999886532 23322 0000011 168899
Q ss_pred HHHHHHhcC
Q 040741 218 IGQICKEFK 226 (457)
Q Consensus 218 i~~l~~~~~ 226 (457)
|.++..+..
T Consensus 96 I~~ll~~~p 104 (149)
T COG3019 96 IARLLAEKP 104 (149)
T ss_pred HHHHHhCCC
Confidence 999877654
No 425
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=45.67 E-value=1.6e+02 Score=27.95 Aligned_cols=36 Identities=11% Similarity=0.106 Sum_probs=21.4
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCcEEEeCC--hHHHHHHH
Q 040741 97 WESEVAVETARSQIADLIGASPKEIIFTSG--ATESNNVS 134 (457)
Q Consensus 97 ~~~~~~~~~~~~~la~~~g~~~~~i~~t~g--~T~a~~~a 134 (457)
.+..+...|+.++..+++..+. +++.+| ||.|-.++
T Consensus 162 lGyv~~a~Ei~~Q~~~~~~fD~--vVva~gs~gT~AGl~~ 199 (323)
T COG2515 162 LGYVRLALEIAEQAEQLLKFDS--VVVAPGSGGTHAGLLV 199 (323)
T ss_pred ccHHHHHHHHHHHHhhccCCCE--EEEeCCCcchHHHHHH
Confidence 3445778888888887755443 555444 55554433
No 426
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=44.92 E-value=1.4e+02 Score=28.94 Aligned_cols=109 Identities=12% Similarity=0.175 Sum_probs=57.8
Q ss_pred EEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHH---HhcCcEEEEEeCCCCCCCCHHHHHHhcCCCc
Q 040741 121 IIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHL---QQEGFEITYLPVGADGIVNLDELRAAIRPDT 197 (457)
Q Consensus 121 i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~---~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t 197 (457)
+....|.++.-.--+..+... .++-.+|+-+..|......++.. +..--++..+ .+...+.+..++++....
T Consensus 99 ~~vavG~~~~d~er~~~L~~~--~~g~D~iviD~AhGhs~~~i~~ik~ik~~~P~~~vI---aGNV~T~e~a~~Li~aGA 173 (346)
T PRK05096 99 VMVSTGTSDADFEKTKQILAL--SPALNFICIDVANGYSEHFVQFVAKAREAWPDKTIC---AGNVVTGEMVEELILSGA 173 (346)
T ss_pred EEEEecCCHHHHHHHHHHHhc--CCCCCEEEEECCCCcHHHHHHHHHHHHHhCCCCcEE---EecccCHHHHHHHHHcCC
Confidence 444555444433334444410 24656666666777666555543 2211112222 223446777777776543
Q ss_pred eEEE-------EeccccccccccC----hHHHHHHHHhcCCcEEEehh
Q 040741 198 GLIS-------VMAVNNEIGVIQP----MEEIGQICKEFKIPFHTDAA 234 (457)
Q Consensus 198 ~li~-------i~~~~~~~G~~~~----l~~i~~l~~~~~v~li~D~a 234 (457)
..|- +|..--.+|+=.| +.+.++.++++|+++|.|+-
T Consensus 174 D~vKVGIGpGSiCtTr~vtGvG~PQltAV~~~a~~a~~~gvpiIADGG 221 (346)
T PRK05096 174 DIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGQIVSDGG 221 (346)
T ss_pred CEEEEcccCCccccCccccccChhHHHHHHHHHHHHHHcCCCEEecCC
Confidence 3331 1222223555555 66777888999999999974
No 427
>COG1908 FrhD Coenzyme F420-reducing hydrogenase, delta subunit [Energy production and conversion]
Probab=44.49 E-value=59 Score=26.11 Aligned_cols=42 Identities=26% Similarity=0.449 Sum_probs=32.4
Q ss_pred HHHHcCCCccCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHHHhcChh
Q 040741 391 VLRALGVDEDMAHTSIRFGIGRFTTEAEVDRAIELTVKQVEKLREMSPL 439 (457)
Q Consensus 391 ~l~~~g~~~~~~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~~~~~~~ 439 (457)
++..+|+.+ .++|+-. ++..|-|++.+.+++++++++++.|.
T Consensus 86 ~l~elgie~----eRv~~~w---iSa~E~ekf~e~~~efv~~i~~lGpn 127 (132)
T COG1908 86 LLKELGIEP----ERVRVLW---ISAAEGEKFAETINEFVERIKELGPN 127 (132)
T ss_pred HHHHhCCCc----ceEEEEE---EehhhHHHHHHHHHHHHHHHHHhCCC
Confidence 456677765 5666543 34679999999999999999999885
No 428
>TIGR03600 phage_DnaB phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model.
Probab=44.49 E-value=2.1e+02 Score=28.73 Aligned_cols=17 Identities=12% Similarity=-0.041 Sum_probs=8.0
Q ss_pred CCCEEEEcCCCCcchHH
Q 040741 145 KKRHVITTQTEHKCVLD 161 (457)
Q Consensus 145 ~g~~vi~~~~~h~~~~~ 161 (457)
.|..|++.+.+.....-
T Consensus 222 ~g~~v~~fSlEm~~~~l 238 (421)
T TIGR03600 222 EGKPVLFFSLEMSAEQL 238 (421)
T ss_pred CCCcEEEEECCCCHHHH
Confidence 34455554555444433
No 429
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=43.57 E-value=1.1e+02 Score=24.20 Aligned_cols=66 Identities=29% Similarity=0.356 Sum_probs=40.2
Q ss_pred HHHHHhcCcEEEEEeCCCCCCCCHHHHHHhc-CCCceEEEEeccccccccccChHHHHHHHHhc---CCcEEEehh
Q 040741 163 CRHLQQEGFEITYLPVGADGIVNLDELRAAI-RPDTGLISVMAVNNEIGVIQPMEEIGQICKEF---KIPFHTDAA 234 (457)
Q Consensus 163 ~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i-~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~---~v~li~D~a 234 (457)
...++..|+++.++..+ +.++++.+.+ +.++.+|.++... +.....++++.+.+++. ++.+++=+.
T Consensus 20 ~~~l~~~G~~V~~lg~~----~~~~~l~~~~~~~~pdvV~iS~~~--~~~~~~~~~~i~~l~~~~~~~~~i~vGG~ 89 (119)
T cd02067 20 ARALRDAGFEVIDLGVD----VPPEEIVEAAKEEDADAIGLSGLL--TTHMTLMKEVIEELKEAGLDDIPVLVGGA 89 (119)
T ss_pred HHHHHHCCCEEEECCCC----CCHHHHHHHHHHcCCCEEEEeccc--cccHHHHHHHHHHHHHcCCCCCeEEEECC
Confidence 34557789999777633 4566665544 5567788776542 23445567777777775 344554443
No 430
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=42.47 E-value=2.9e+02 Score=25.76 Aligned_cols=157 Identities=11% Similarity=0.122 Sum_probs=78.4
Q ss_pred CCCcEEecCCCCCCCC--HHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHH-HHhCCCCCcEEEeCChHHHH
Q 040741 55 AGRPLYLDMQATTPVD--PRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIA-DLIGASPKEIIFTSGATESN 131 (457)
Q Consensus 55 ~~~~i~l~~~~~~~~~--~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la-~~~g~~~~~i~~t~g~T~a~ 131 (457)
+-+.+=++++-..|+. |-+.++..+.+.+. ... +..-++.+.++ +....+ +++.+-...-.
T Consensus 37 GaD~iEiGiPfSDP~ADGpvIq~A~~rAL~~G------------~~~-~~~~~~~~~ir~~~~~~p---ivlm~Y~N~i~ 100 (259)
T PF00290_consen 37 GADIIEIGIPFSDPVADGPVIQKASQRALKNG------------FTL-EKIFELVKEIRKKEPDIP---IVLMTYYNPIF 100 (259)
T ss_dssp TBSSEEEE--SSSCTTSSHHHHHHHHHHHHTT--------------H-HHHHHHHHHHHHHCTSSE---EEEEE-HHHHH
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHHHHHHCC------------CCH-HHHHHHHHHHhccCCCCC---EEEEeeccHHh
Confidence 3445555555555443 44555555555431 111 22223333344 333432 55554333333
Q ss_pred HHHHHHhhhhhcCCC-CEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccc
Q 040741 132 NVSIKGVMHFYKDKK-RHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIG 210 (457)
Q Consensus 132 ~~al~~~~~~~~~~g-~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G 210 (457)
...+..+.....+.| +-+|+++.-+.-.......+...|+..+.+=.+. ...+.+++..+....+|++......||
T Consensus 101 ~~G~e~F~~~~~~aGvdGlIipDLP~ee~~~~~~~~~~~gl~~I~lv~p~---t~~~Ri~~i~~~a~gFiY~vs~~GvTG 177 (259)
T PF00290_consen 101 QYGIERFFKEAKEAGVDGLIIPDLPPEESEELREAAKKHGLDLIPLVAPT---TPEERIKKIAKQASGFIYLVSRMGVTG 177 (259)
T ss_dssp HH-HHHHHHHHHHHTEEEEEETTSBGGGHHHHHHHHHHTT-EEEEEEETT---S-HHHHHHHHHH-SSEEEEESSSSSSS
T ss_pred ccchHHHHHHHHHcCCCEEEEcCCChHHHHHHHHHHHHcCCeEEEEECCC---CCHHHHHHHHHhCCcEEEeeccCCCCC
Confidence 333333332222323 7788888766555555556677798887653331 145667766666677888877777799
Q ss_pred cccC----hHHHHHHHHhc-CCcEE
Q 040741 211 VIQP----MEEIGQICKEF-KIPFH 230 (457)
Q Consensus 211 ~~~~----l~~i~~l~~~~-~v~li 230 (457)
...+ +++..+..|++ +.++.
T Consensus 178 ~~~~~~~~l~~~i~~ik~~~~~Pv~ 202 (259)
T PF00290_consen 178 SRTELPDELKEFIKRIKKHTDLPVA 202 (259)
T ss_dssp TTSSCHHHHHHHHHHHHHTTSS-EE
T ss_pred CcccchHHHHHHHHHHHhhcCcceE
Confidence 8754 55555556665 44443
No 431
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=41.80 E-value=1.7e+02 Score=28.05 Aligned_cols=36 Identities=14% Similarity=0.121 Sum_probs=26.8
Q ss_pred EEEEeccccccccccC-hHHHHHHHHhcCCcEEEehhh
Q 040741 199 LISVMAVNNEIGVIQP-MEEIGQICKEFKIPFHTDAAQ 235 (457)
Q Consensus 199 li~i~~~~~~~G~~~~-l~~i~~l~~~~~v~li~D~a~ 235 (457)
+|++ ..+-|.|.-.+ ..+|.++|++.|+.+++|...
T Consensus 132 ~Vvl-sGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 132 IVVL-SGSLPPGVPPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred EEEE-eCCCCCCCCHHHHHHHHHHHHhcCCeEEEECCh
Confidence 4433 34445666654 789999999999999999764
No 432
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=41.69 E-value=1.6e+02 Score=25.02 Aligned_cols=52 Identities=17% Similarity=0.182 Sum_probs=30.9
Q ss_pred cCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCC
Q 040741 169 EGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKI 227 (457)
Q Consensus 169 ~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v 227 (457)
.++++...+.. |++.+.+++..-..+|+...+. .......+.+.+.|++.++
T Consensus 39 ~~~~~~~~d~~-----d~~~~~~al~~~d~vi~~~~~~--~~~~~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 39 PGVEIIQGDLF-----DPDSVKAALKGADAVIHAAGPP--PKDVDAAKNIIEAAKKAGV 90 (183)
T ss_dssp TTEEEEESCTT-----CHHHHHHHHTTSSEEEECCHST--TTHHHHHHHHHHHHHHTTS
T ss_pred cccccceeeeh-----hhhhhhhhhhhcchhhhhhhhh--ccccccccccccccccccc
Confidence 36666555544 8899999998655555444322 1123335667777777543
No 433
>KOG0352 consensus ATP-dependent DNA helicase [Replication, recombination and repair]
Probab=41.39 E-value=1.9e+02 Score=28.94 Aligned_cols=54 Identities=7% Similarity=0.124 Sum_probs=32.2
Q ss_pred CCCceEEEEeccccccccccChHHHHH-HHHhc-CCcEEEehhhhcCCCcccCCCCcccEEE
Q 040741 194 RPDTGLISVMAVNNEIGVIQPMEEIGQ-ICKEF-KIPFHTDAAQALGKIPVDVEKWNVSLMS 253 (457)
Q Consensus 194 ~~~t~li~i~~~~~~~G~~~~l~~i~~-l~~~~-~v~li~D~a~~~g~~~~~~~~~~~Di~~ 253 (457)
++++++++|+...--+-. .+.+.. +++++ =.++++|+||.+..+.-|+. +|.+-
T Consensus 111 kp~~K~LYITPE~AAt~~---FQ~lLn~L~~r~~L~Y~vVDEAHCVSQWGHDFR---PDYL~ 166 (641)
T KOG0352|consen 111 KPTIKMLYITPEGAATDG---FQKLLNGLANRDVLRYIVVDEAHCVSQWGHDFR---PDYLT 166 (641)
T ss_pred CCceeEEEEchhhhhhhh---HHHHHHHHhhhceeeeEEechhhhHhhhccccC---cchhh
Confidence 467788888654322222 344333 34443 35788999999877655553 56553
No 434
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=41.30 E-value=63 Score=28.60 Aligned_cols=37 Identities=19% Similarity=0.287 Sum_probs=28.9
Q ss_pred CCCceEEEEeccccccccccChHHHHHHHHhcCCcEEE
Q 040741 194 RPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHT 231 (457)
Q Consensus 194 ~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~ 231 (457)
.-.+..|+++-. |+.|.....+++.++|++||+.++.
T Consensus 154 Gl~Pa~VicEi~-~~dG~mar~~~~~~fa~~h~l~~it 190 (203)
T COG0108 154 GLKPAGVICEIM-NDDGTMARLPELEEFAKEHGLPVIT 190 (203)
T ss_pred CCCCcEEEEEEe-CCCccccChHHHHHHHHHcCCcEEE
Confidence 334555655544 5699999999999999999998874
No 435
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=41.02 E-value=92 Score=25.61 Aligned_cols=56 Identities=16% Similarity=0.271 Sum_probs=38.3
Q ss_pred HHHHhcCcEEEEEeCCCCCCCCHHH-HHHhcCCCceEEEEeccccccccccChHHHHHHHHhc
Q 040741 164 RHLQQEGFEITYLPVGADGIVNLDE-LRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEF 225 (457)
Q Consensus 164 ~~~~~~G~~v~~v~~~~~~~~d~~~-le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~ 225 (457)
..++..|++|+..... ..+++ ++++.+.+..+|+++... +....-++++.+..++.
T Consensus 24 ~~l~~~GfeVi~lg~~----~s~e~~v~aa~e~~adii~iSsl~--~~~~~~~~~~~~~L~~~ 80 (132)
T TIGR00640 24 TAYADLGFDVDVGPLF----QTPEEIARQAVEADVHVVGVSSLA--GGHLTLVPALRKELDKL 80 (132)
T ss_pred HHHHhCCcEEEECCCC----CCHHHHHHHHHHcCCCEEEEcCch--hhhHHHHHHHHHHHHhc
Confidence 3456779999887655 34555 466677788888887664 33444478888877775
No 436
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=40.59 E-value=3.2e+02 Score=25.73 Aligned_cols=111 Identities=18% Similarity=0.223 Sum_probs=58.3
Q ss_pred HHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcC--CCCcchHHHHHHHHhcCcEEEEEeCCCCCCCC
Q 040741 108 SQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQ--TEHKCVLDSCRHLQQEGFEITYLPVGADGIVN 185 (457)
Q Consensus 108 ~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~--~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d 185 (457)
+.-++++. +...++|.+.+......++.... .++.-+|++.+ +...+... ++.+...|++++.+.-+.
T Consensus 101 ~~a~~~I~--~g~~ILTh~~S~tv~~~l~~A~~--~gk~~~V~v~EsrP~~qG~~l-a~eL~~~GI~vtlI~Dsa----- 170 (275)
T PRK08335 101 NIGSELID--DGDVIITHSFSSAVLEILKTAKR--KGKRFKVILTESAPDYEGLAL-ANELEFLGIEFEVITDAQ----- 170 (275)
T ss_pred HHHHHHcC--CCCEEEEECCcHHHHHHHHHHHH--cCCceEEEEecCCCchhHHHH-HHHHHHCCCCEEEEeccH-----
Confidence 33345554 33477777755444444443331 13345677755 44444444 555667799999987431
Q ss_pred HHHHHHhcCCCceEEEEecccccccccc-Ch--HHHHHHHHhcCCcEEE
Q 040741 186 LDELRAAIRPDTGLISVMAVNNEIGVIQ-PM--EEIGQICKEFKIPFHT 231 (457)
Q Consensus 186 ~~~le~~i~~~t~li~i~~~~~~~G~~~-~l--~~i~~l~~~~~v~li~ 231 (457)
.-.+-+. -+..++-...+.. .|.+. .+ -.++-+||.|++++++
T Consensus 171 ~~~~m~~--vd~VivGAD~I~~-nG~v~NKiGT~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 171 LGLFAKE--ATLALVGADNVTR-DGYVVNKAGTYLLALACHDNGVPFYV 216 (275)
T ss_pred HHHHHHh--CCEEEECccEEec-CCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 1112111 1223333333332 34333 33 3577788999999998
No 437
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=40.46 E-value=2.1e+02 Score=23.63 Aligned_cols=56 Identities=25% Similarity=0.287 Sum_probs=37.2
Q ss_pred HHHHhcCcEEEEEeCCCCCCCCHHHHHHhc-CCCceEEEEeccccccccccChHHHHHHHHhc
Q 040741 164 RHLQQEGFEITYLPVGADGIVNLDELRAAI-RPDTGLISVMAVNNEIGVIQPMEEIGQICKEF 225 (457)
Q Consensus 164 ~~~~~~G~~v~~v~~~~~~~~d~~~le~~i-~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~ 225 (457)
..++..|++++++..+ +.++++.+++ ..++.+|.++...+ .....++++.+.+++.
T Consensus 25 ~~lr~~G~eVi~LG~~----vp~e~i~~~a~~~~~d~V~lS~~~~--~~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 25 RALTEAGFEVINLGVM----TSQEEFIDAAIETDADAILVSSLYG--HGEIDCRGLREKCIEA 81 (137)
T ss_pred HHHHHCCCEEEECCCC----CCHHHHHHHHHHcCCCEEEEcCccc--cCHHHHHHHHHHHHhc
Confidence 3457789999998765 4566666554 56777888866543 3334467777777765
No 438
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=40.38 E-value=1.7e+02 Score=28.37 Aligned_cols=129 Identities=12% Similarity=0.148 Sum_probs=66.2
Q ss_pred EEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHH---HhcCcEEEEEeCCCCCCCCHHHHHHhcCCCc
Q 040741 121 IIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHL---QQEGFEITYLPVGADGIVNLDELRAAIRPDT 197 (457)
Q Consensus 121 i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~---~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t 197 (457)
+....|..+.-.--+..+... .++-.+|+-+..|......++.. +..--.+..+. +...+.+..+++++...
T Consensus 98 ~~vsvG~~~~d~er~~~L~~a--~~~~d~iviD~AhGhs~~~i~~ik~ir~~~p~~~via---GNV~T~e~a~~Li~aGA 172 (343)
T TIGR01305 98 VAVSSGSSDNDLEKMTSILEA--VPQLKFICLDVANGYSEHFVEFVKLVREAFPEHTIMA---GNVVTGEMVEELILSGA 172 (343)
T ss_pred EEEEeccCHHHHHHHHHHHhc--CCCCCEEEEECCCCcHHHHHHHHHHHHhhCCCCeEEE---ecccCHHHHHHHHHcCC
Confidence 444554444433344445421 23455666666777666555543 22111122222 22567888888887655
Q ss_pred eEEEEe--cccc-----ccccccC----hHHHHHHHHhcCCcEEEehhhhc-CCCcccCCCCcccEEEec
Q 040741 198 GLISVM--AVNN-----EIGVIQP----MEEIGQICKEFKIPFHTDAAQAL-GKIPVDVEKWNVSLMSLS 255 (457)
Q Consensus 198 ~li~i~--~~~~-----~~G~~~~----l~~i~~l~~~~~v~li~D~a~~~-g~~~~~~~~~~~Di~~~s 255 (457)
..|.+. ..++ .+|+-.| +.++++.++++++.+|.|+---. |-+.-.+ ..|+|.++..
T Consensus 173 D~ikVgiGpGSicttR~~~Gvg~pqltAv~~~a~aa~~~~v~VIaDGGIr~~gDI~KAL-A~GAd~VMlG 241 (343)
T TIGR01305 173 DIVKVGIGPGSVCTTRTKTGVGYPQLSAVIECADAAHGLKGHIISDGGCTCPGDVAKAF-GAGADFVMLG 241 (343)
T ss_pred CEEEEcccCCCcccCceeCCCCcCHHHHHHHHHHHhccCCCeEEEcCCcCchhHHHHHH-HcCCCEEEEC
Confidence 444332 1111 2344444 56677777788999999974322 2111111 2356776665
No 439
>PLN03013 cysteine synthase
Probab=40.37 E-value=98 Score=31.21 Aligned_cols=82 Identities=4% Similarity=-0.002 Sum_probs=48.7
Q ss_pred EEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEE
Q 040741 121 IIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLI 200 (457)
Q Consensus 121 i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li 200 (457)
++-.++|..++-+|..+-.. +-+..|++++.........++.+ |++|+.++...+..-..+..+++..+....+
T Consensus 178 VVeaSSGN~G~ALA~~a~~~---G~~~~VvvP~~~s~~K~~~ira~---GAeVi~v~~~~~~~~a~~~A~ela~~~~g~~ 251 (429)
T PLN03013 178 LVEPTSGNTGIGLAFIAASR---GYRLILTMPASMSMERRVLLKAF---GAELVLTDPAKGMTGAVQKAEEILKNTPDAY 251 (429)
T ss_pred EEEECCcHHHHHHHHHHHHc---CCCEEEEECCCCcHHHHHHHHHc---CCEEEEECCCCChHHHHHHHHHHHhhcCCeE
Confidence 77777888888777776553 55677788777666666666555 9999988644221111233444444433445
Q ss_pred EEeccccc
Q 040741 201 SVMAVNNE 208 (457)
Q Consensus 201 ~i~~~~~~ 208 (457)
++....|+
T Consensus 252 ~~~qy~Np 259 (429)
T PLN03013 252 MLQQFDNP 259 (429)
T ss_pred eCCCCCCH
Confidence 44443344
No 440
>PRK06372 translation initiation factor IF-2B subunit delta; Provisional
Probab=40.26 E-value=3.1e+02 Score=25.47 Aligned_cols=97 Identities=16% Similarity=0.194 Sum_probs=54.6
Q ss_pred cEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcC--CCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC-C
Q 040741 120 EIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQ--TEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP-D 196 (457)
Q Consensus 120 ~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~--~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~-~ 196 (457)
++++|-|.+..+...+.. . +++.+|++.+ +.+.+. ..++.+...|+++++++-. .+-..+.. +
T Consensus 88 dvILT~s~S~~v~~~l~~-~----~~~~~V~v~ESrP~~eG~-~~a~~L~~~GI~vtli~Ds--------a~~~~m~~vd 153 (253)
T PRK06372 88 SVIGTISSSQVLKAFISS-S----EKIKSVYILESRPMLEGI-DMAKLLVKSGIDVVLLTDA--------SMCEAVLNVD 153 (253)
T ss_pred CEEEEeCCcHHHHHHHHh-c----CCCCEEEEecCCCchHHH-HHHHHHHHCCCCEEEEehh--------HHHHHHHhCC
Confidence 488888877666655533 1 3435676654 444454 3445556679999888632 11222322 2
Q ss_pred ceEEEEeccccccccccC---hHHHHHHHHhcCCcEEE
Q 040741 197 TGLISVMAVNNEIGVIQP---MEEIGQICKEFKIPFHT 231 (457)
Q Consensus 197 t~li~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li~ 231 (457)
..++-...+.. .|.+.. ---++-.|+++++++++
T Consensus 154 ~VlvGAd~V~~-nG~v~nkvGT~~~Al~A~~~~vPv~V 190 (253)
T PRK06372 154 AVIVGSDSVLY-DGGLIHKNGTFPLALCARYLKKPFYS 190 (253)
T ss_pred EEEECccEEec-CCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 22332333322 344433 33577788999999998
No 441
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=40.13 E-value=74 Score=26.58 Aligned_cols=60 Identities=23% Similarity=0.350 Sum_probs=42.3
Q ss_pred HHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCC
Q 040741 163 CRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKI 227 (457)
Q Consensus 163 ~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v 227 (457)
.+.+...|++|++.+.-... -+.+.+++.++...|.++..+ -|.....+++.+.++++|+
T Consensus 33 a~~l~d~GfeVi~~g~~~tp---~e~v~aA~~~dv~vIgvSsl~--g~h~~l~~~lve~lre~G~ 92 (143)
T COG2185 33 ARALADAGFEVINLGLFQTP---EEAVRAAVEEDVDVIGVSSLD--GGHLTLVPGLVEALREAGV 92 (143)
T ss_pred HHHHHhCCceEEecCCcCCH---HHHHHHHHhcCCCEEEEEecc--chHHHHHHHHHHHHHHhCC
Confidence 34556779999998765321 244566778787788777653 4566678999999999865
No 442
>cd02068 radical_SAM_B12_BD B12 binding domain_like associated with radical SAM domain. This domain shows similarity with B12 (adenosylcobamide) binding domains found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase, but it lacks the signature motif Asp-X-His-X-X-Gly, which contains the histidine that acts as a cobalt ligand. The function of this domain remains unclear.
Probab=39.66 E-value=1.3e+02 Score=24.14 Aligned_cols=68 Identities=18% Similarity=0.228 Sum_probs=41.8
Q ss_pred HHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhc-C-CCceEEEEeccccccccccChHHHHHHHHhcC--CcEEEehhhhc
Q 040741 162 SCRHLQQEGFEITYLPVGADGIVNLDELRAAI-R-PDTGLISVMAVNNEIGVIQPMEEIGQICKEFK--IPFHTDAAQAL 237 (457)
Q Consensus 162 ~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i-~-~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~--v~li~D~a~~~ 237 (457)
.+.++...|..+..++.. ..++..+.+ . .++.+|.++.. +.......++.+..|+.+ +.+++=+.+..
T Consensus 8 ~aa~l~~~g~~v~~~~~~-----~~~~~~~~~~~~~~pdiv~~S~~---~~~~~~~~~~~~~ik~~~p~~~iv~GG~~~t 79 (127)
T cd02068 8 LAAVLEDAGFIVAEHDVL-----SADDIVEDIKELLKPDVVGISLM---TSAIYEALELAKIAKEVLPNVIVVVGGPHAT 79 (127)
T ss_pred HHHHHHHCCCeeeecCCC-----CHHHHHHHHHHhcCCCEEEEeec---cccHHHHHHHHHHHHHHCCCCEEEECCcchh
Confidence 344556668777776643 234433333 3 57788888753 334445677778778764 88887776654
No 443
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=39.53 E-value=1.2e+02 Score=26.59 Aligned_cols=101 Identities=15% Similarity=0.163 Sum_probs=41.9
Q ss_pred cEEEeCChHHHHHHHHHHhhhhhcC--CCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCC-C
Q 040741 120 EIIFTSGATESNNVSIKGVMHFYKD--KKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRP-D 196 (457)
Q Consensus 120 ~i~~t~g~T~a~~~al~~~~~~~~~--~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~-~ 196 (457)
..+...+++.+=..++..+...+.+ ++..|+++..+-.+...+.+.+. ....+.++|.| .+..+++.++. +
T Consensus 22 ~~iWiHa~SvGE~~a~~~Li~~l~~~~p~~~illT~~T~tg~~~~~~~~~-~~v~~~~~P~D-----~~~~~~rfl~~~~ 95 (186)
T PF04413_consen 22 PLIWIHAASVGEVNAARPLIKRLRKQRPDLRILLTTTTPTGREMARKLLP-DRVDVQYLPLD-----FPWAVRRFLDHWR 95 (186)
T ss_dssp T-EEEE-SSHHHHHHHHHHHHHHTT---TS-EEEEES-CCHHHHHHGG-G-GG-SEEE---S-----SHHHHHHHHHHH-
T ss_pred CcEEEEECCHHHHHHHHHHHHHHHHhCCCCeEEEEecCCchHHHHHHhCC-CCeEEEEeCcc-----CHHHHHHHHHHhC
Confidence 3444445555544444444443333 47777777666655555543332 25667777766 34444444431 2
Q ss_pred ceEEE-EeccccccccccChHHHHHHHHhcCCcEEEehh
Q 040741 197 TGLIS-VMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAA 234 (457)
Q Consensus 197 t~li~-i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a 234 (457)
+++++ ++. .=++.+...|++.|+.+++=.+
T Consensus 96 P~~~i~~Et--------ElWPnll~~a~~~~ip~~LvNa 126 (186)
T PF04413_consen 96 PDLLIWVET--------ELWPNLLREAKRRGIPVVLVNA 126 (186)
T ss_dssp -SEEEEES------------HHHHHH-----S-EEEEEE
T ss_pred CCEEEEEcc--------ccCHHHHHHHhhcCCCEEEEee
Confidence 33333 332 2366888889999988775443
No 444
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=39.38 E-value=65 Score=28.43 Aligned_cols=36 Identities=19% Similarity=0.144 Sum_probs=29.0
Q ss_pred CceEEEEeccccccccccChHHHHHHHHhcCCcEEE
Q 040741 196 DTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHT 231 (457)
Q Consensus 196 ~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~ 231 (457)
+..+|.++-.+|..|.+.|.+.-+++++++|+.++.
T Consensus 112 ~kvvILLTDG~n~~~~i~P~~aAa~lA~~~gV~iyt 147 (191)
T cd01455 112 EAIVIVLSDANLERYGIQPKKLADALAREPNVNAFV 147 (191)
T ss_pred CcEEEEEeCCCcCCCCCChHHHHHHHHHhCCCEEEE
Confidence 346778888888888888888778999999988775
No 445
>PRK06371 translation initiation factor IF-2B subunit alpha; Provisional
Probab=39.01 E-value=3.7e+02 Score=26.04 Aligned_cols=81 Identities=19% Similarity=0.190 Sum_probs=44.0
Q ss_pred CCCCEEEEcC--CCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcC-C--CceEEEEeccccccccccC-h--
Q 040741 144 DKKRHVITTQ--TEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIR-P--DTGLISVMAVNNEIGVIQP-M-- 215 (457)
Q Consensus 144 ~~g~~vi~~~--~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~-~--~t~li~i~~~~~~~G~~~~-l-- 215 (457)
++.-+|++.+ |...+....+..+...|++++.+.-+ .+-..+. . +..++-...+.. .|.+.+ +
T Consensus 168 gk~f~V~v~EsRP~~qG~rlta~eL~~~GI~vtlI~Ds--------a~~~~M~~~~Vd~VivGAd~I~a-NG~v~NKiGT 238 (329)
T PRK06371 168 GKNIFVFVDETRPRLQGARLTAWELAQEGIDHAIIADN--------AAGYFMRKKEIDLVIVGADRIAS-NGDFANKIGT 238 (329)
T ss_pred CCeeEEEECCCCCcchHHHHHHHHHHHCCCCEEEEccc--------HHHHHhhhcCCCEEEECccEEec-CCCEeehhhH
Confidence 3445777755 33334333345556779999988633 1122222 1 223333333332 343333 3
Q ss_pred HHHHHHHHhcCCcEEEeh
Q 040741 216 EEIGQICKEFKIPFHTDA 233 (457)
Q Consensus 216 ~~i~~l~~~~~v~li~D~ 233 (457)
-.++-+||.||+++++=+
T Consensus 239 ~~lAl~Ak~~~VPfyV~a 256 (329)
T PRK06371 239 YEKAVLAKVNGIPFYVAA 256 (329)
T ss_pred HHHHHHHHHcCCCEEEec
Confidence 357788999999999754
No 446
>PF01976 DUF116: Protein of unknown function DUF116; InterPro: IPR002829 These archaeal and bacterial proteins have no known function. Members of this family contain seven conserved cysteines and may also be an integral membrane protein.
Probab=38.69 E-value=1.6e+02 Score=25.10 Aligned_cols=75 Identities=13% Similarity=0.263 Sum_probs=49.6
Q ss_pred HHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC----CCCCC
Q 040741 109 QIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG----ADGIV 184 (457)
Q Consensus 109 ~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~----~~~~~ 184 (457)
.+++-.|.. +.+.+|||.+-..+ . +.....++.--.+.-...++..+...|+.+.-+..+ .+..+
T Consensus 80 ~lae~~g~~---v~i~~Ggt~ar~~i----k----~~~p~~iigVAC~~dL~~g~~~~~~~~ip~~gV~l~~~gC~~T~V 148 (158)
T PF01976_consen 80 KLAEKYGYK---VYIATGGTLARKII----K----EYRPKAIIGVACERDLISGIQDLKPLGIPVQGVLLDRPGCINTDV 148 (158)
T ss_pred HHHHHcCCE---EEEEcChHHHHHHH----H----HhCCCEEEEEechHHHHHHHHHHhhcCCCeeEEEeCCCCcCCCcc
Confidence 455666775 88888899776443 2 222225555555666666777777777888777665 34588
Q ss_pred CHHHHHHhcC
Q 040741 185 NLDELRAAIR 194 (457)
Q Consensus 185 d~~~le~~i~ 194 (457)
|+++++++|+
T Consensus 149 d~~~v~~~i~ 158 (158)
T PF01976_consen 149 DWEKVEEAIQ 158 (158)
T ss_pred cHHHHHHHhC
Confidence 9999998763
No 447
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=38.40 E-value=1.7e+02 Score=27.76 Aligned_cols=84 Identities=15% Similarity=0.281 Sum_probs=55.6
Q ss_pred CCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccc--cC-----hH
Q 040741 144 DKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVI--QP-----ME 216 (457)
Q Consensus 144 ~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~--~~-----l~ 216 (457)
+-|..||++-........-.+..+..| ++.+.+.+ ..|.+.+++++.-...+|-+..-..+|+.. .+ -+
T Consensus 83 k~GSQviiPyR~d~~~~r~lkvmGdLG-Qvl~~~fd---~~DedSIr~vvk~sNVVINLIGrd~eTknf~f~Dvn~~~ae 158 (391)
T KOG2865|consen 83 KMGSQVIIPYRGDEYDPRHLKVMGDLG-QVLFMKFD---LRDEDSIRAVVKHSNVVINLIGRDYETKNFSFEDVNVHIAE 158 (391)
T ss_pred hcCCeEEEeccCCccchhheeeccccc-ceeeeccC---CCCHHHHHHHHHhCcEEEEeeccccccCCcccccccchHHH
Confidence 678888886655555544444443333 55566554 348899999988666677666666677754 22 46
Q ss_pred HHHHHHHhcCCcEEE
Q 040741 217 EIGQICKEFKIPFHT 231 (457)
Q Consensus 217 ~i~~l~~~~~v~li~ 231 (457)
+|+.+|++-|+-=++
T Consensus 159 rlAricke~GVerfI 173 (391)
T KOG2865|consen 159 RLARICKEAGVERFI 173 (391)
T ss_pred HHHHHHHhhChhhee
Confidence 899999998764333
No 448
>PLN02672 methionine S-methyltransferase
Probab=38.31 E-value=2.1e+02 Score=32.63 Aligned_cols=130 Identities=13% Similarity=0.082 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHHhC------CCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHH-----hc
Q 040741 101 VAVETARSQIADLIG------ASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQ-----QE 169 (457)
Q Consensus 101 ~~~~~~~~~la~~~g------~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~-----~~ 169 (457)
..-..+|..++.++. ..++++++-++-..|++.+++.+-....- -|.- +++.-+..+..+...-. ..
T Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 503 (1082)
T PLN02672 426 AGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAI-VDEH-LTRWLPKKWLTSLAIENATSDSKS 503 (1082)
T ss_pred ccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHh-hhhh-hhccCCHHHHhHhhhhcccccCcc
Confidence 345567778877764 35788999999999998888765421100 0111 22333333333322221 11
Q ss_pred CcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhh
Q 040741 170 GFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQ 235 (457)
Q Consensus 170 G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~ 235 (457)
+-.++.+..+.... -+-+|.+.+++ ++|+........-...-.+.|.+.+++.|..+++|..-
T Consensus 504 ~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (1082)
T PLN02672 504 DDVITVIEAPRQSD-LVIELIKKLKP--QVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDISD 566 (1082)
T ss_pred CCeEEEEeCCCcch-HHHHHHHhCCC--eEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehhh
Confidence 23444444331110 12334444444 44443333222222234788999999999999999763
No 449
>PRK10494 hypothetical protein; Provisional
Probab=37.44 E-value=84 Score=29.27 Aligned_cols=71 Identities=15% Similarity=0.222 Sum_probs=44.8
Q ss_pred HHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC
Q 040741 105 TARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG 179 (457)
Q Consensus 105 ~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~ 179 (457)
++-++++.-+|++++.++.-.-++.-.+.+..+... . +....++|++..| ...+...++..|.+++..|++
T Consensus 140 ~~~~~~l~~lGVp~~~Ii~e~~s~nT~eNa~~~~~~-~-~~~~iiLVTsa~H--m~RA~~~f~~~Gl~v~p~Ptd 210 (259)
T PRK10494 140 EVGARVAQSLGVPREDIITLDLPKDTEEEAAAVKQA-I-GDAPFLLVTSASH--LPRAMIFFQQEGLNPLPAPAN 210 (259)
T ss_pred HHHHHHHHHcCCCHHHeeeCCCCCCHHHHHHHHHHH-h-CCCCEEEECCHHH--HHHHHHHHHHcCCceeecCCc
Confidence 344555556899877777655444444443332221 1 4456789988888 445566777889999988876
No 450
>PLN02361 alpha-amylase
Probab=37.21 E-value=1e+02 Score=30.85 Aligned_cols=83 Identities=12% Similarity=0.220 Sum_probs=51.8
Q ss_pred CCCCEEEEcCCCC--------cchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccCh
Q 040741 144 DKKRHVITTQTEH--------KCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPM 215 (457)
Q Consensus 144 ~~g~~vi~~~~~h--------~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l 215 (457)
..++.|++...+. ....+-+.+++..|++.+.++......-. ..-...-.-.++...|...++
T Consensus 8 ~~~~~v~lQ~F~W~~~~~~~w~~i~~kl~~l~~lG~t~iwl~P~~~~~~~---------~GY~~~d~y~~~~~~Gt~~el 78 (401)
T PLN02361 8 RNGREILLQAFNWESHKHDWWRNLEGKVPDLAKSGFTSAWLPPPSQSLAP---------EGYLPQNLYSLNSAYGSEHLL 78 (401)
T ss_pred cCCCcEEEEEEeccCCccHHHHHHHHHHHHHHHcCCCEEEeCCCCcCCCC---------CCCCcccccccCcccCCHHHH
Confidence 4456666654432 23444556667889999999865321100 000001011123457999999
Q ss_pred HHHHHHHHhcCCcEEEehhh
Q 040741 216 EEIGQICKEFKIPFHTDAAQ 235 (457)
Q Consensus 216 ~~i~~l~~~~~v~li~D~a~ 235 (457)
+++++-||++|+.+++|.+.
T Consensus 79 ~~li~~~h~~gi~vi~D~V~ 98 (401)
T PLN02361 79 KSLLRKMKQYNVRAMADIVI 98 (401)
T ss_pred HHHHHHHHHcCCEEEEEEcc
Confidence 99999999999999999874
No 451
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=36.16 E-value=54 Score=26.75 Aligned_cols=39 Identities=18% Similarity=0.292 Sum_probs=24.6
Q ss_pred HHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEE
Q 040741 187 DELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHT 231 (457)
Q Consensus 187 ~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~ 231 (457)
+.+++.+..++-+|+++... .+-+++.++|++++++++.
T Consensus 72 ~~l~~l~~~~~P~iIvt~~~------~~p~~l~e~a~~~~ipll~ 110 (127)
T PF02603_consen 72 ERLEKLFSYNPPCIIVTRGL------EPPPELIELAEKYNIPLLR 110 (127)
T ss_dssp CHHHHHCTTT-S-EEEETTT---------HHHHHHHHHCT--EEE
T ss_pred HHHHHHhCCCCCEEEEECcC------CCCHHHHHHHHHhCCcEEE
Confidence 34566677788888886543 6678999999999999875
No 452
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=36.13 E-value=1.6e+02 Score=27.36 Aligned_cols=50 Identities=10% Similarity=0.211 Sum_probs=28.7
Q ss_pred CHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehh
Q 040741 185 NLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAA 234 (457)
Q Consensus 185 d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a 234 (457)
+.+.+++.+..=.++|+=+.-.-.-+..-.+++|.+++++.++++++|+-
T Consensus 91 av~~i~k~L~RlhavVIGPGLGRdp~~~k~i~~iley~~~~dvP~VIDaD 140 (306)
T KOG3974|consen 91 AVDIIEKLLQRLHAVVIGPGLGRDPAILKEIAKILEYLRGKDVPLVIDAD 140 (306)
T ss_pred hHhHHHHHHhheeEEEECCCCCCCHHHHHHHHHHHHHHhcCCCcEEEcCC
Confidence 44555655543333332222111112222377899999999999999975
No 453
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=36.10 E-value=1.8e+02 Score=22.18 Aligned_cols=63 Identities=16% Similarity=0.143 Sum_probs=35.2
Q ss_pred HHHhcCcEEEEEeCCCCCCC-CHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEe
Q 040741 165 HLQQEGFEITYLPVGADGIV-NLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTD 232 (457)
Q Consensus 165 ~~~~~G~~v~~v~~~~~~~~-d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D 232 (457)
.++..|.+.... -..++.- ....+++.+..-..+|+++... .. .-...+.+.|+++|++++.=
T Consensus 18 ~~~~~G~~~~~h-g~~~~~~~~~~~l~~~i~~aD~VIv~t~~v-sH---~~~~~vk~~akk~~ip~~~~ 81 (97)
T PF10087_consen 18 ILEKYGGKLIHH-GRDGGDEKKASRLPSKIKKADLVIVFTDYV-SH---NAMWKVKKAAKKYGIPIIYS 81 (97)
T ss_pred HHHHcCCEEEEE-ecCCCCccchhHHHHhcCCCCEEEEEeCCc-Ch---HHHHHHHHHHHHcCCcEEEE
Confidence 445669998888 2222221 2224777665333333333221 11 22667889999999988753
No 454
>PLN02565 cysteine synthase
Probab=35.66 E-value=1.2e+02 Score=29.24 Aligned_cols=52 Identities=8% Similarity=-0.035 Sum_probs=36.6
Q ss_pred EEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeC
Q 040741 121 IIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPV 178 (457)
Q Consensus 121 i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~ 178 (457)
++-.++|..+.-+|..+-.. +-...|++++..-......++.+ |++++.++.
T Consensus 70 vv~aSsGN~g~alA~~a~~~---G~~~~ivvp~~~~~~k~~~i~~~---GA~V~~~~~ 121 (322)
T PLN02565 70 LIEPTSGNTGIGLAFMAAAK---GYKLIITMPASMSLERRIILLAF---GAELVLTDP 121 (322)
T ss_pred EEEECCChHHHHHHHHHHHc---CCeEEEEeCCCCcHHHHHHHHHc---CCEEEEeCC
Confidence 66677788887777665442 55667788777666666666555 999988764
No 455
>COG1587 HemD Uroporphyrinogen-III synthase [Coenzyme metabolism]
Probab=35.48 E-value=2.2e+02 Score=26.14 Aligned_cols=137 Identities=14% Similarity=0.197 Sum_probs=67.5
Q ss_pred HHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHH-HHHHHHhcCcEEEEEeCCCCCCC
Q 040741 106 ARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLD-SCRHLQQEGFEITYLPVGADGIV 184 (457)
Q Consensus 106 ~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~-~~~~~~~~G~~v~~v~~~~~~~~ 184 (457)
++..+..+-. .+.++|||. .|.......+. ..+.. ........++.. .++.++..|+.+.++|.+.+..-
T Consensus 41 l~~~l~~l~~--~d~vvfTS~--~av~~~~~~l~----~~~~~-~~~~~~i~aVG~~Ta~~l~~~G~~~~~~p~~~~~~~ 111 (248)
T COG1587 41 LEVALEDLDS--ADWVVFTSP--NAVRFFFEALK----EQGLD-ALKNKKIAAVGEKTAEALRKLGIKVDFIPEDGDSEG 111 (248)
T ss_pred HHHHHhcccc--CCEEEEECH--HHHHHHHHHHH----hhccc-ccccCeEEEEcHHHHHHHHHhCCCCCcCCCccchHH
Confidence 4555555545 455888864 33334344333 22211 111222222322 34556777999999986433322
Q ss_pred CHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhhcCCCccc-------CCCCcccEEEeccc
Q 040741 185 NLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQALGKIPVD-------VEKWNVSLMSLSGH 257 (457)
Q Consensus 185 d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~~g~~~~~-------~~~~~~Di~~~s~~ 257 (457)
.++.+.+......+++++-+.. |. +.+.+-....|+-+..=.+|-.-....+ ....++|+++++++
T Consensus 112 l~~~l~~~~~~~~~vl~~~~~~---~r----~~l~~~L~~~G~~v~~~~~Y~~~~~~~~~~~~~~~~~~~~~d~v~ftS~ 184 (248)
T COG1587 112 LLEELPELLKGGKRVLILRGNG---GR----EVLEEKLEERGAEVREVEVYRTEPPPLDEATLIELLKLGEVDAVVFTSS 184 (248)
T ss_pred HHHHhhhhccCCCeEEEEcCCC---ch----HHHHHHHHhCCCEEEEEeeeeecCCCccHHHHHHHHHhCCCCEEEEeCH
Confidence 2344444333334444443321 22 4566666777777665554433222222 22336788888766
Q ss_pred c
Q 040741 258 K 258 (457)
Q Consensus 258 K 258 (457)
.
T Consensus 185 ~ 185 (248)
T COG1587 185 S 185 (248)
T ss_pred H
Confidence 4
No 456
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=35.24 E-value=1e+02 Score=31.76 Aligned_cols=70 Identities=17% Similarity=0.187 Sum_probs=49.5
Q ss_pred HHHHHhcC-cEEEEEeCCCCCCCCHHHHHHhcC-CCceEEEEeccccccccccChHHHHHHHHhc--CCcEEEehhhh
Q 040741 163 CRHLQQEG-FEITYLPVGADGIVNLDELRAAIR-PDTGLISVMAVNNEIGVIQPMEEIGQICKEF--KIPFHTDAAQA 236 (457)
Q Consensus 163 ~~~~~~~G-~~v~~v~~~~~~~~d~~~le~~i~-~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~--~v~li~D~a~~ 236 (457)
+..++..| .+|..++... ..++.+++.+.+. .++.+|.++.. +.......++++.+|+. ++.+++=+.|.
T Consensus 29 Aa~L~~~G~~~V~iiD~~~-~~~~~~~~~~~l~~~~pdvVgis~~---t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~ 102 (497)
T TIGR02026 29 GGALLDAGYHDVTFLDAMT-GPLTDEKLVERLRAHCPDLVLITAI---TPAIYIACETLKFARERLPNAIIVLGGIHP 102 (497)
T ss_pred HHHHHhcCCcceEEecccc-cCCCHHHHHHHHHhcCcCEEEEecC---cccHHHHHHHHHHHHHHCCCCEEEEcCCCc
Confidence 33456679 6899998653 3456777777664 46788888653 34445567888888887 99999988875
No 457
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=34.66 E-value=1.3e+02 Score=27.90 Aligned_cols=83 Identities=13% Similarity=0.211 Sum_probs=53.6
Q ss_pred CCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcC---CCceEEEEeccccccccccC-hHHHHH
Q 040741 145 KKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIR---PDTGLISVMAVNNEIGVIQP-MEEIGQ 220 (457)
Q Consensus 145 ~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~---~~t~li~i~~~~~~~G~~~~-l~~i~~ 220 (457)
-|++++..+.........++.+...|+++..+-+-.| |+++|.++++ ++..+|+++.. .|-..| +..- .
T Consensus 9 vG~ElL~G~ivdtNa~~la~~L~~~G~~v~~~~~VgD---~~~~I~~~l~~a~~r~D~vI~tGG---LGPT~DDiT~e-~ 81 (255)
T COG1058 9 VGDELLSGRIVDTNAAFLADELTELGVDLARITTVGD---NPDRIVEALREASERADVVITTGG---LGPTHDDLTAE-A 81 (255)
T ss_pred EccceecCceecchHHHHHHHHHhcCceEEEEEecCC---CHHHHHHHHHHHHhCCCEEEECCC---cCCCccHhHHH-H
Confidence 4788888777766666677888888999988766544 5666655553 34777777554 333332 3322 3
Q ss_pred HHHhcCCcEEEehh
Q 040741 221 ICKEFKIPFHTDAA 234 (457)
Q Consensus 221 l~~~~~v~li~D~a 234 (457)
+|+..|..+..|+-
T Consensus 82 vAka~g~~lv~~~~ 95 (255)
T COG1058 82 VAKALGRPLVLDEE 95 (255)
T ss_pred HHHHhCCCcccCHH
Confidence 55666888888854
No 458
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=34.30 E-value=2.4e+02 Score=25.11 Aligned_cols=44 Identities=16% Similarity=0.276 Sum_probs=31.6
Q ss_pred CCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEe
Q 040741 180 ADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTD 232 (457)
Q Consensus 180 ~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D 232 (457)
.+..+|.++++++++....+++-++. -+++.+.|++++++.+--
T Consensus 60 AGTVl~~e~a~~ai~aGA~FivSP~~---------~~~vi~~a~~~~i~~iPG 103 (201)
T PRK06015 60 AGTILNAKQFEDAAKAGSRFIVSPGT---------TQELLAAANDSDVPLLPG 103 (201)
T ss_pred eEeCcCHHHHHHHHHcCCCEEECCCC---------CHHHHHHHHHcCCCEeCC
Confidence 44567788888888777666654433 258999999999987754
No 459
>cd06409 PB1_MUG70 The MUG70 protein is a product of the meiotically up-regulated gene 70 which has a role in meiosis and harbors a PB1 domain. The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domains depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic amino acid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is
Probab=33.09 E-value=59 Score=24.53 Aligned_cols=75 Identities=20% Similarity=0.306 Sum_probs=46.6
Q ss_pred CCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHH
Q 040741 87 NPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHL 166 (457)
Q Consensus 87 ~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~ 166 (457)
.|.++.|++.-.....+.++.+.+++.+|.+... +.... +.+....|+.|+++... -..+++..+
T Consensus 7 ~~~GrvhRf~~~~s~~~~~L~~~I~~Rl~~d~~~-------~~~~~------L~YlDDEgD~VllT~D~--DL~e~v~ia 71 (86)
T cd06409 7 DPKGRVHRFRLRPSESLEELRTLISQRLGDDDFE-------THLYA------LSYVDDEGDIVLITSDS--DLVAAVLVA 71 (86)
T ss_pred CCCCCEEEEEecCCCCHHHHHHHHHHHhCCcccc-------CCccc------EEEEcCCCCEEEEeccc--hHHHHHHHH
Confidence 4566677766555567889999999999987532 11111 12333778888775433 355666666
Q ss_pred HhcCcEEEEE
Q 040741 167 QQEGFEITYL 176 (457)
Q Consensus 167 ~~~G~~v~~v 176 (457)
+..|-+.+.+
T Consensus 72 r~~g~~~v~L 81 (86)
T cd06409 72 RSAGLKKLDL 81 (86)
T ss_pred HHcCCCEEEE
Confidence 6667665544
No 460
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=32.98 E-value=78 Score=31.32 Aligned_cols=82 Identities=13% Similarity=0.184 Sum_probs=48.0
Q ss_pred EEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCC-CCHHHHHHhcCC---CceEEEEeccccccccccChHHHHHHHH
Q 040741 148 HVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGI-VNLDELRAAIRP---DTGLISVMAVNNEIGVIQPMEEIGQICK 223 (457)
Q Consensus 148 ~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~-~d~~~le~~i~~---~t~li~i~~~~~~~G~~~~l~~i~~l~~ 223 (457)
.-++....++..... |.+. ...++..++.++... .+.+.|.+.+++ +...++++. +--|.+.+.+.+.++||
T Consensus 93 ~~l~~~~~r~T~~K~-Rv~s-~nQQllRvD~Ee~~~~~~~~~ll~~~~~~l~~~~~vVLSD--Y~KG~L~~~q~~I~~ar 168 (467)
T COG2870 93 SDLLRDKNRPTIVKL-RVLS-RNQQLLRLDFEEKFPIEDENKLLEKIKNALKSFDALVLSD--YAKGVLTNVQKMIDLAR 168 (467)
T ss_pred cceEeecCCCceeee-eeec-ccceEEEecccccCcchhHHHHHHHHHHHhhcCCEEEEec--cccccchhHHHHHHHHH
Confidence 334445566665543 2221 123455555553322 334444444432 334555543 34789999999999999
Q ss_pred hcCCcEEEeh
Q 040741 224 EFKIPFHTDA 233 (457)
Q Consensus 224 ~~~v~li~D~ 233 (457)
+.|+++++|-
T Consensus 169 ~~~~pVLvDP 178 (467)
T COG2870 169 EAGIPVLVDP 178 (467)
T ss_pred HcCCcEEECC
Confidence 9999999994
No 461
>PF00478 IMPDH: IMP dehydrogenase / GMP reductase domain; InterPro: IPR001093 Synonym(s): Inosine-5'-monophosphate dehydrogenase, Inosinic acid dehydrogenase; Synonym(s): Guanosine 5'-monophosphate oxidoreductase This entry contains two related enzymes IMP dehydrogenase and GMP reducatase. These enzymes adopt a TIM barrel structure. IMP dehydrogenase (1.1.1.205 from EC) (IMPDH) catalyzes the rate-limiting reaction of de novo GTP biosynthesis, the NAD-dependent reduction of IMP into XMP []. Inosine 5-phosphate + NAD+ + H2O = xanthosine 5-phosphate + NADH IMP dehydrogenase is associated with cell proliferation and is a possible target for cancer chemotherapy. Mammalian and bacterial IMPDHs are tetramers of identical chains. There are two IMP dehydrogenase isozymes in humans []. IMP dehydrogenase nearly always contains a long insertion that has two CBS domains within it. GMP reductase (1.7.1.7 from EC) catalyzes the irreversible and NADPH-dependent reductive deamination of GMP into IMP []. NADPH + guanosine 5-phosphate = NADP+ + inosine 5-phosphate + NH3 It converts nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and maintains intracellular balance of A and G nucleotides.; GO: 0003824 catalytic activity, 0055114 oxidation-reduction process; PDB: 3FFS_D 1VRD_A 1JCN_B 1EEP_B 3TSB_B 3USB_B 3TSD_A 4FF0_A 4FEZ_A 3KHJ_D ....
Probab=32.94 E-value=4e+02 Score=26.13 Aligned_cols=50 Identities=18% Similarity=0.313 Sum_probs=32.1
Q ss_pred CCHHHHHHhcCCCceEEEEecc-------ccccccccC----hHHHHHHHHhcCCcEEEeh
Q 040741 184 VNLDELRAAIRPDTGLISVMAV-------NNEIGVIQP----MEEIGQICKEFKIPFHTDA 233 (457)
Q Consensus 184 ~d~~~le~~i~~~t~li~i~~~-------~~~~G~~~~----l~~i~~l~~~~~v~li~D~ 233 (457)
.+.+..+.+++.....|-+--. ...+|.=.| +-+.++.+++|++++|.|+
T Consensus 158 ~T~e~a~~L~~aGad~vkVGiGpGsiCtTr~v~GvG~PQ~tAv~~~a~~a~~~~v~iIADG 218 (352)
T PF00478_consen 158 VTYEGAKDLIDAGADAVKVGIGPGSICTTREVTGVGVPQLTAVYECAEAARDYGVPIIADG 218 (352)
T ss_dssp -SHHHHHHHHHTT-SEEEESSSSSTTBHHHHHHSBSCTHHHHHHHHHHHHHCTTSEEEEES
T ss_pred CCHHHHHHHHHcCCCEEEEeccCCcccccccccccCCcHHHHHHHHHHHhhhccCceeecC
Confidence 3677777777765555544211 111455555 6678888999999999997
No 462
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=32.84 E-value=1.7e+02 Score=25.32 Aligned_cols=67 Identities=13% Similarity=0.215 Sum_probs=35.9
Q ss_pred EeCChHHHHHHHHHHhhhhhcCCC-CEEEEcCC--CCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcC
Q 040741 123 FTSGATESNNVSIKGVMHFYKDKK-RHVITTQT--EHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIR 194 (457)
Q Consensus 123 ~t~g~T~a~~~al~~~~~~~~~~g-~~vi~~~~--~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~ 194 (457)
+..||+.++-..+.-.+.. ... ..|++.+. ........++.++..|.++.++.+|-. |.+++++++.
T Consensus 4 litGG~gglg~~la~~La~--~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~---d~~~v~~~~~ 73 (181)
T PF08659_consen 4 LITGGLGGLGQSLARWLAE--RGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVT---DPEAVAAALA 73 (181)
T ss_dssp EEETTTSHHHHHHHHHHHH--TT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TT---SHHHHHHHHH
T ss_pred EEECCccHHHHHHHHHHHH--cCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCcc---CHHHHHHHHH
Confidence 3444555554444432221 223 34555555 244455567777778999999988743 6777777664
No 463
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=32.79 E-value=2.2e+02 Score=26.17 Aligned_cols=72 Identities=11% Similarity=0.119 Sum_probs=40.8
Q ss_pred CcchHHHHHHHH---hcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEE--eccccccccccChHHHHHHHHhcCCcEE
Q 040741 156 HKCVLDSCRHLQ---QEGFEITYLPVGADGIVNLDELRAAIRPDTGLISV--MAVNNEIGVIQPMEEIGQICKEFKIPFH 230 (457)
Q Consensus 156 h~~~~~~~~~~~---~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i--~~~~~~~G~~~~l~~i~~l~~~~~v~li 230 (457)
.+-..+.++.++ ..|+.+..+-.+ |+..-+++.+-...+|.. ..+.+..|. .+.+-|..+++..++++|
T Consensus 106 lpd~~~tv~aa~~L~~~Gf~vlpyc~d-----d~~~ar~l~~~G~~~vmPlg~pIGsg~Gi-~~~~~I~~I~e~~~vpVI 179 (248)
T cd04728 106 LPDPIETLKAAEILVKEGFTVLPYCTD-----DPVLAKRLEDAGCAAVMPLGSPIGSGQGL-LNPYNLRIIIERADVPVI 179 (248)
T ss_pred ccCHHHHHHHHHHHHHCCCEEEEEeCC-----CHHHHHHHHHcCCCEeCCCCcCCCCCCCC-CCHHHHHHHHHhCCCcEE
Confidence 344444444444 449999866555 676666665556656633 333333332 234445555555689999
Q ss_pred Eeh
Q 040741 231 TDA 233 (457)
Q Consensus 231 ~D~ 233 (457)
+|+
T Consensus 180 ~eg 182 (248)
T cd04728 180 VDA 182 (248)
T ss_pred EeC
Confidence 995
No 464
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=32.66 E-value=1.3e+02 Score=29.74 Aligned_cols=84 Identities=8% Similarity=-0.017 Sum_probs=46.8
Q ss_pred cEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceE
Q 040741 120 EIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGL 199 (457)
Q Consensus 120 ~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~l 199 (457)
.++-.++|..+.-+|..+-.. +-..+|+++...-......++. .|++++.++...+..-..+..++..++++..
T Consensus 113 ~vV~aSsGN~G~alA~~a~~~---G~~~~ivvp~~~~~~k~~~lr~---~GA~Vi~~~~~~~~~~~~~~a~~l~~~~~~~ 186 (368)
T PLN02556 113 TLIEPTSGNMGISLAFMAAMK---GYKMILTMPSYTSLERRVTMRA---FGAELVLTDPTKGMGGTVKKAYELLESTPDA 186 (368)
T ss_pred EEEEeCCchHHHHHHHHHHHc---CCCEEEEECCCCCHHHHHHHHH---cCCEEEEECCCCCccHHHHHHHHHHHhcCCC
Confidence 366677788787777766442 4456777766544445444444 4999998874322111234444444444444
Q ss_pred EEEecccccc
Q 040741 200 ISVMAVNNEI 209 (457)
Q Consensus 200 i~i~~~~~~~ 209 (457)
+.+...+|+.
T Consensus 187 ~~~~q~~np~ 196 (368)
T PLN02556 187 FMLQQFSNPA 196 (368)
T ss_pred CccCCCCCHH
Confidence 5444444543
No 465
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=32.56 E-value=2.9e+02 Score=25.80 Aligned_cols=99 Identities=12% Similarity=0.198 Sum_probs=51.5
Q ss_pred EEEeCChHHHHHHHHHHhhhhhcCCCCE-EEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCC---
Q 040741 121 IIFTSGATESNNVSIKGVMHFYKDKKRH-VITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPD--- 196 (457)
Q Consensus 121 i~~t~g~T~a~~~al~~~~~~~~~~g~~-vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~--- 196 (457)
-++.+|+|.++-..+.-.+. ++|.+ |++.+....-..-+.+.-...|.++..+++|-...-+.+.+.+.+..+
T Consensus 8 ~~lITGASsGIG~~~A~~lA---~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~ 84 (265)
T COG0300 8 TALITGASSGIGAELAKQLA---RRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGP 84 (265)
T ss_pred EEEEECCCchHHHHHHHHHH---HCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCc
Confidence 44455677777665553332 55554 566665554444343443445788888888744333455555555443
Q ss_pred ceEEEEeccccccccc--cChHHHHHHH
Q 040741 197 TGLISVMAVNNEIGVI--QPMEEIGQIC 222 (457)
Q Consensus 197 t~li~i~~~~~~~G~~--~~l~~i~~l~ 222 (457)
..+++-+......|.+ .++++..+.-
T Consensus 85 IdvLVNNAG~g~~g~f~~~~~~~~~~mi 112 (265)
T COG0300 85 IDVLVNNAGFGTFGPFLELSLDEEEEMI 112 (265)
T ss_pred ccEEEECCCcCCccchhhCChHHHHHHH
Confidence 3344333333334433 3455555443
No 466
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=32.45 E-value=62 Score=29.10 Aligned_cols=49 Identities=12% Similarity=0.300 Sum_probs=31.5
Q ss_pred HHHHHHhcCCCceEEEEecccccccc-ccChHHHHHHHHhcCCcEEEehh
Q 040741 186 LDELRAAIRPDTGLISVMAVNNEIGV-IQPMEEIGQICKEFKIPFHTDAA 234 (457)
Q Consensus 186 ~~~le~~i~~~t~li~i~~~~~~~G~-~~~l~~i~~l~~~~~v~li~D~a 234 (457)
++.+|++++....++-+=.-+..+-. ..-.+++.++|++|++.+++++-
T Consensus 24 ~~~ve~al~~Gv~~vQlR~K~~~~~~~~~~a~~~~~lc~~~~v~liINd~ 73 (211)
T COG0352 24 LEWVEAALKGGVTAVQLREKDLSDEEYLALAEKLRALCQKYGVPLIINDR 73 (211)
T ss_pred HHHHHHHHhCCCeEEEEecCCCChHHHHHHHHHHHHHHHHhCCeEEecCc
Confidence 66777777766555544333322222 22356899999999999998753
No 467
>PLN00011 cysteine synthase
Probab=32.33 E-value=2.7e+02 Score=26.78 Aligned_cols=53 Identities=13% Similarity=0.030 Sum_probs=35.5
Q ss_pred cEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeC
Q 040741 120 EIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPV 178 (457)
Q Consensus 120 ~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~ 178 (457)
.++-.++|..+.-++..+-.. +-...|+++...-......++. .|++++.++.
T Consensus 71 ~vv~aSsGN~g~alA~~a~~~---G~~~~ivvp~~~~~~k~~~i~~---~GA~V~~~~~ 123 (323)
T PLN00011 71 TLIEATAGNTGIGLACIGAAR---GYKVILVMPSTMSLERRIILRA---LGAEVHLTDQ 123 (323)
T ss_pred EEEEeCCChHHHHHHHHHHHc---CCeEEEEeCCCCCHHHHHHHHH---cCCEEEEECC
Confidence 466677788887776665442 4567778877665555555444 4999998874
No 468
>PF01081 Aldolase: KDPG and KHG aldolase; InterPro: IPR000887 4-Hydroxy-2-oxoglutarate aldolase (4.1.3.16 from EC) (KHG-aldolase) catalyzes the interconversion of 4-hydroxy-2-oxoglutarate into pyruvate and glyoxylate. Phospho-2-dehydro-3-deoxygluconate aldolase (4.1.2.14 from EC) (KDPG-aldolase) catalyzes the interconversion of 6-phospho-2-dehydro-3-deoxy-D-gluconate into pyruvate and glyceraldehyde 3-phosphate. These two enzymes are structurally and functionally related []. They are both homotrimeric proteins of approximately 220 amino-acid residues. They are class I aldolases whose catalytic mechanism involves the formation of a Schiff-base intermediate between the substrate and the epsilon-amino group of a lysine residue. In both enzymes, an arginine is required for catalytic activity.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VCR_A 1FQ0_A 1EUN_A 1EUA_B 1FWR_A 2C0A_B 1WBH_A 1WAU_A 2YW3_B 2YW4_A ....
Probab=32.04 E-value=2.3e+02 Score=25.19 Aligned_cols=42 Identities=19% Similarity=0.347 Sum_probs=25.2
Q ss_pred CCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEeh
Q 040741 183 IVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDA 233 (457)
Q Consensus 183 ~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~ 233 (457)
.+|.++++++++..-.+++-++. -+++.+.|++++++++--.
T Consensus 67 V~~~e~a~~a~~aGA~FivSP~~---------~~~v~~~~~~~~i~~iPG~ 108 (196)
T PF01081_consen 67 VLTAEQAEAAIAAGAQFIVSPGF---------DPEVIEYAREYGIPYIPGV 108 (196)
T ss_dssp --SHHHHHHHHHHT-SEEEESS-----------HHHHHHHHHHTSEEEEEE
T ss_pred ccCHHHHHHHHHcCCCEEECCCC---------CHHHHHHHHHcCCcccCCc
Confidence 44556666655555544444332 2589999999999988653
No 469
>PRK11761 cysM cysteine synthase B; Provisional
Probab=31.72 E-value=2.7e+02 Score=26.40 Aligned_cols=53 Identities=11% Similarity=0.199 Sum_probs=37.7
Q ss_pred cEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeC
Q 040741 120 EIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPV 178 (457)
Q Consensus 120 ~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~ 178 (457)
.++-.++|..+.-+|..+-.. +-...|++++..-......++.+ |++++.++.
T Consensus 65 ~vv~aSsGN~g~alA~~a~~~---G~~~~i~~p~~~~~~k~~~~~~~---GA~v~~~~~ 117 (296)
T PRK11761 65 TLIEATSGNTGIALAMIAAIK---GYRMKLIMPENMSQERRAAMRAY---GAELILVPK 117 (296)
T ss_pred EEEEeCCChHHHHHHHHHHHc---CCCEEEEECCCCCHHHHHHHHHc---CCEEEEeCC
Confidence 477778888888777766442 55677888776655555555554 999999985
No 470
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=31.55 E-value=33 Score=32.29 Aligned_cols=68 Identities=16% Similarity=0.154 Sum_probs=43.3
Q ss_pred HHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhh
Q 040741 160 LDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQ 235 (457)
Q Consensus 160 ~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~ 235 (457)
..-+.+++..|++.+++..-.... . -...-...-...++...|...+++++++.||++|+.||+|-+.
T Consensus 7 ~~kLdyl~~lGv~~I~l~Pi~~~~-~-------~~~gY~~~d~~~vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~ 74 (316)
T PF00128_consen 7 IDKLDYLKDLGVNAIWLSPIFESP-N-------GYHGYDPSDYYAVDPRFGTMEDFKELVDAAHKRGIKVILDVVP 74 (316)
T ss_dssp HHTHHHHHHHTESEEEESS-EESS-S-------STTTTSESEEEEESTTTBHHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred HHhhHHHHHcCCCceecccccccc-c-------ccccccceeeeccccccchhhhhhhhhhccccccceEEEeeec
Confidence 334556666799888875431100 0 0001122223335556899999999999999999999999875
No 471
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=31.32 E-value=3.5e+02 Score=26.01 Aligned_cols=67 Identities=16% Similarity=0.251 Sum_probs=48.5
Q ss_pred HHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehhhh
Q 040741 165 HLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQA 236 (457)
Q Consensus 165 ~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~ 236 (457)
.++..|++++...++... |.....+.+..++.+|+++.-++. ..-++.+...+.+++++++.+...+
T Consensus 183 ~A~~~Gl~vve~~v~~~n--di~~a~~~l~g~~d~i~~p~dn~i---~s~~~~l~~~a~~~kiPli~sd~~~ 249 (322)
T COG2984 183 EARKAGLEVVEAAVTSVN--DIPRAVQALLGKVDVIYIPTDNLI---VSAIESLLQVANKAKIPLIASDTSS 249 (322)
T ss_pred HHHHCCCEEEEEecCccc--ccHHHHHHhcCCCcEEEEecchHH---HHHHHHHHHHHHHhCCCeecCCHHH
Confidence 446679999988876332 566666677778888887665432 2247788889999999999988765
No 472
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=31.23 E-value=2.7e+02 Score=26.40 Aligned_cols=46 Identities=20% Similarity=0.230 Sum_probs=28.2
Q ss_pred HHHHHHhcCCCceEEEEecccccccc-ccChHHHHHHHHhcCCcEEEehhh
Q 040741 186 LDELRAAIRPDTGLISVMAVNNEIGV-IQPMEEIGQICKEFKIPFHTDAAQ 235 (457)
Q Consensus 186 ~~~le~~i~~~t~li~i~~~~~~~G~-~~~l~~i~~l~~~~~v~li~D~a~ 235 (457)
++.++++.....+.+++..- |. ..+-++|.++|+++|+.++==.+.
T Consensus 79 ~~~l~e~~~~gvk~avI~s~----Gf~~~~~~~l~~~a~~~girvlGPNc~ 125 (291)
T PRK05678 79 ADAILEAIDAGIDLIVCITE----GIPVLDMLEVKAYLERKKTRLIGPNCP 125 (291)
T ss_pred HHHHHHHHHCCCCEEEEECC----CCCHHHHHHHHHHHHHcCCEEECCCCC
Confidence 56677777766655444322 21 111238999999999988744443
No 473
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=31.12 E-value=1.8e+02 Score=22.46 Aligned_cols=41 Identities=32% Similarity=0.413 Sum_probs=27.0
Q ss_pred CHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEE
Q 040741 185 NLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHT 231 (457)
Q Consensus 185 d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~ 231 (457)
..+-+..++....+.++++ |...|-+++.++|+++++.++.
T Consensus 50 R~di~~~a~~~~i~~iIlt------g~~~~~~~v~~la~~~~i~vi~ 90 (105)
T PF07085_consen 50 REDIQLAAIEAGIACIILT------GGLEPSEEVLELAKELGIPVIS 90 (105)
T ss_dssp -HHHHHHHCCTTECEEEEE------TT----HHHHHHHHHHT-EEEE
T ss_pred cHHHHHHHHHhCCCEEEEe------CCCCCCHHHHHHHHHCCCEEEE
Confidence 4566777777777777774 5667788999999999988874
No 474
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=30.41 E-value=1.8e+02 Score=26.82 Aligned_cols=94 Identities=18% Similarity=0.232 Sum_probs=45.4
Q ss_pred cEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceE
Q 040741 120 EIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGL 199 (457)
Q Consensus 120 ~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~l 199 (457)
.+++..|.++|..++=+... .++..++++-..|.... +++.+. ....|..+.+.+.+.++++..-
T Consensus 4 ~ilvlGGT~Dar~la~~L~~----~~~~~~~ss~t~~g~~l-----~~~~~~------~~~~G~l~~e~l~~~l~e~~i~ 68 (257)
T COG2099 4 RILLLGGTSDARALAKKLAA----APVDIILSSLTGYGAKL-----AEQIGP------VRVGGFLGAEGLAAFLREEGID 68 (257)
T ss_pred eEEEEeccHHHHHHHHHhhc----cCccEEEEEcccccccc-----hhccCC------eeecCcCCHHHHHHHHHHcCCC
Confidence 37777778888776544433 45566666655553332 111121 1134555666666666554332
Q ss_pred EEEeccccccccccChHHHHHHHHhcCCcEE
Q 040741 200 ISVMAVNNEIGVIQPMEEIGQICKEFKIPFH 230 (457)
Q Consensus 200 i~i~~~~~~~G~~~~l~~i~~l~~~~~v~li 230 (457)
++|...| |+-.... +-..+.|++.|++.+
T Consensus 69 llIDATH-PyAa~iS-~Na~~aake~gipy~ 97 (257)
T COG2099 69 LLIDATH-PYAARIS-QNAARAAKETGIPYL 97 (257)
T ss_pred EEEECCC-hHHHHHH-HHHHHHHHHhCCcEE
Confidence 3333222 1111111 123456666666544
No 475
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=30.31 E-value=1.2e+02 Score=28.71 Aligned_cols=151 Identities=12% Similarity=0.098 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHhhccCCCCCCccchhhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEE
Q 040741 71 PRVLDAMLPFYLSRYGNPHSRTHLFGWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVI 150 (457)
Q Consensus 71 ~~v~~a~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi 150 (457)
.++.+.+.+.+.+. |.............+.-...+++.++++...+++ ++++.|...+. .+.+.+. +.-..|.
T Consensus 14 ~~~~~gf~~~L~~~-g~~~~~~~~~~~~a~~d~~~~~~~~~~l~~~~~D-lIi~~gt~aa~-~~~~~~~----~~iPVVf 86 (294)
T PF04392_consen 14 DDIVRGFKDGLKEL-GYDEKNVEIEYKNAEGDPEKLRQIARKLKAQKPD-LIIAIGTPAAQ-ALAKHLK----DDIPVVF 86 (294)
T ss_dssp HHHHHHHHHHHHHT-T--CCCEEEEEEE-TT-HHHHHHHHHHHCCTS-S-EEEEESHHHHH-HHHHH-S----S-S-EEE
T ss_pred HHHHHHHHHHHHHc-CCccccEEEEEecCCCCHHHHHHHHHHHhcCCCC-EEEEeCcHHHH-HHHHhcC----CCcEEEE
Confidence 45566666666543 2111001110112222345566666666665665 88887655543 3333322 2223333
Q ss_pred EcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEE
Q 040741 151 TTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFH 230 (457)
Q Consensus 151 ~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li 230 (457)
+ .-..+-..+........|-+++.+--...-.-.++-+.+.+..-+++.++-..+. .......+.+.+.++++|+-++
T Consensus 87 ~-~V~dp~~~~l~~~~~~~~~nvTGv~~~~~~~~~l~l~~~l~P~~k~igvl~~~~~-~~~~~~~~~~~~~a~~~g~~l~ 164 (294)
T PF04392_consen 87 C-GVSDPVGAGLVDSLDRPGKNVTGVSERPPIEKQLELIKKLFPDAKRIGVLYDPSE-PNSVAQIEQLRKAAKKLGIELV 164 (294)
T ss_dssp E-CES-TTTTTS-S-SSS--SSEEEEEE---HHHHHHHHHHHSTT--EEEEEEETT--HHHHHHHHHHHHHHHHTT-EEE
T ss_pred E-eccChhhhhccccccCCCCCEEEEECCcCHHHHHHHHHHhCCCCCEEEEEecCCC-ccHHHHHHHHHHHHHHcCCEEE
Confidence 3 2211111111111222244565554221100112223333333344434433332 3345567888888999988765
No 476
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=30.29 E-value=36 Score=35.91 Aligned_cols=37 Identities=11% Similarity=0.063 Sum_probs=31.7
Q ss_pred EEEeccccccccccChHHHHHHHHhcCCcEEEehhhh
Q 040741 200 ISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAAQA 236 (457)
Q Consensus 200 i~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~~ 236 (457)
+..=.+++..|...+++++++-|+++||-||+|-+++
T Consensus 201 ~g~yAp~sryGtPedfk~fVD~aH~~GIgViLD~V~~ 237 (628)
T COG0296 201 TGYYAPTSRYGTPEDFKALVDAAHQAGIGVILDWVPN 237 (628)
T ss_pred ceeccccccCCCHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 3334466779999999999999999999999999875
No 477
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=30.08 E-value=4.5e+02 Score=24.34 Aligned_cols=136 Identities=10% Similarity=0.126 Sum_probs=72.6
Q ss_pred CCCCccch-hhhHHHHHHHHHHHHHHHhCCCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHH
Q 040741 88 PHSRTHLF-GWESEVAVETARSQIADLIGASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHL 166 (457)
Q Consensus 88 p~~~~~~~-~~~~~~~~~~~~~~la~~~g~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~ 166 (457)
|.++.+.+ |.+. +.+..+.+ .++-+|.+ ++-+.-....+..+.. . -|.+-+...+-.... -.+.+
T Consensus 53 pRts~~sf~G~G~-~gl~~L~~-~~~~~Gl~---~~Tev~d~~~v~~~~e-~-------vdilqIgs~~~~n~~-LL~~v 118 (250)
T PRK13397 53 PRTSAASFQGLGL-QGIRYLHE-VCQEFGLL---SVSEIMSERQLEEAYD-Y-------LDVIQVGARNMQNFE-FLKTL 118 (250)
T ss_pred CCCCCcccCCCCH-HHHHHHHH-HHHHcCCC---EEEeeCCHHHHHHHHh-c-------CCEEEECcccccCHH-HHHHH
Confidence 44444433 3332 34444443 46666764 4545555555555433 2 245555444333222 23333
Q ss_pred HhcCcEEEEEeCCCCCCCCHHHHHHhcC-----CCceEEEEe-cccc---ccccccChHHHHHHHHhcCCcEEEehhhhc
Q 040741 167 QQEGFEITYLPVGADGIVNLDELRAAIR-----PDTGLISVM-AVNN---EIGVIQPMEEIGQICKEFKIPFHTDAAQAL 237 (457)
Q Consensus 167 ~~~G~~v~~v~~~~~~~~d~~~le~~i~-----~~t~li~i~-~~~~---~~G~~~~l~~i~~l~~~~~v~li~D~a~~~ 237 (457)
...| +++.++ .+-..++++++.+++ -+..++.+. .+.+ ++-...++..|..+.+++++++++|..|+.
T Consensus 119 a~tg-kPVilk--~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~ 195 (250)
T PRK13397 119 SHID-KPILFK--RGLMATIEEYLGALSYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHST 195 (250)
T ss_pred HccC-CeEEEe--CCCCCCHHHHHHHHHHHHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCC
Confidence 3334 344443 222567787777664 234555554 2211 122256788888888889999999999997
Q ss_pred CCC
Q 040741 238 GKI 240 (457)
Q Consensus 238 g~~ 240 (457)
|..
T Consensus 196 G~r 198 (250)
T PRK13397 196 GRR 198 (250)
T ss_pred ccc
Confidence 754
No 478
>COG2121 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=30.06 E-value=1.8e+02 Score=26.00 Aligned_cols=70 Identities=16% Similarity=0.259 Sum_probs=47.9
Q ss_pred HHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccCh-HHHHHHHHhcCCcEEEehh
Q 040741 163 CRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPM-EEIGQICKEFKIPFHTDAA 234 (457)
Q Consensus 163 ~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l-~~i~~l~~~~~v~li~D~a 234 (457)
++.++..|++++.=..+.+|.--+-++...+++...+++. +..|-|-+..+ +.+..+++++|+.++-=.+
T Consensus 84 A~~l~kfG~~~IRGSs~Kgg~~Alr~l~k~Lk~G~~i~it--pDgPkGp~~~~~~Gii~LA~~sg~pi~pv~~ 154 (214)
T COG2121 84 ARLLEKFGLRVIRGSSNKGGISALRALLKALKQGKSIAIT--PDGPKGPVHKIGDGIIALAQKSGVPIIPVGV 154 (214)
T ss_pred HHHHHHcCceEEeccCCcchHHHHHHHHHHHhCCCcEEEc--CCCCCCCceeccchhhHhhHhcCCCeEEEEE
Confidence 4667788999988776766654455555566666555443 44567777664 5699999999998875443
No 479
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=29.99 E-value=4e+02 Score=23.70 Aligned_cols=91 Identities=12% Similarity=0.201 Sum_probs=47.6
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhhhhhcCCCCEE-EEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcC
Q 040741 116 ASPKEIIFTSGATESNNVSIKGVMHFYKDKKRHV-ITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIR 194 (457)
Q Consensus 116 ~~~~~i~~t~g~T~a~~~al~~~~~~~~~~g~~v-i~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~ 194 (457)
.+...+++.+||..|...+ +.+. +.|-.| +++...++.. ..+...| ++.++.-+ .+.++++
T Consensus 7 l~gk~vlVvGgG~va~rk~-~~Ll----~~ga~VtVvsp~~~~~l----~~l~~~~-~i~~~~~~----~~~~dl~---- 68 (205)
T TIGR01470 7 LEGRAVLVVGGGDVALRKA-RLLL----KAGAQLRVIAEELESEL----TLLAEQG-GITWLARC----FDADILE---- 68 (205)
T ss_pred cCCCeEEEECcCHHHHHHH-HHHH----HCCCEEEEEcCCCCHHH----HHHHHcC-CEEEEeCC----CCHHHhC----
Confidence 3334588999998886654 5555 455455 4444333222 2222224 56555433 2233331
Q ss_pred CCceEEEEeccccccccccChHHHHHHHHhcCCcEE
Q 040741 195 PDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFH 230 (457)
Q Consensus 195 ~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li 230 (457)
...+|++ . ||....-..|...|++.++++-
T Consensus 69 -~~~lVi~-a----t~d~~ln~~i~~~a~~~~ilvn 98 (205)
T TIGR01470 69 -GAFLVIA-A----TDDEELNRRVAHAARARGVPVN 98 (205)
T ss_pred -CcEEEEE-C----CCCHHHHHHHHHHHHHcCCEEE
Confidence 3334433 3 2333334579999999988774
No 480
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=29.86 E-value=3.9e+02 Score=25.44 Aligned_cols=54 Identities=7% Similarity=0.177 Sum_probs=35.5
Q ss_pred EEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC
Q 040741 121 IIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG 179 (457)
Q Consensus 121 i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~ 179 (457)
+++|+||..--.+...-+. +.|.++++.+.+-.+..+..+.....| ++....+|
T Consensus 41 vLITGgg~GlGr~ialefa----~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cd 94 (300)
T KOG1201|consen 41 VLITGGGSGLGRLIALEFA----KRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCD 94 (300)
T ss_pred EEEeCCCchHHHHHHHHHH----HhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEec
Confidence 7777776654444444444 677788777777777777777665556 66666666
No 481
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=29.38 E-value=3.1e+02 Score=24.52 Aligned_cols=93 Identities=19% Similarity=0.309 Sum_probs=52.4
Q ss_pred EEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEE
Q 040741 122 IFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLIS 201 (457)
Q Consensus 122 ~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~ 201 (457)
+-.....++..+ ..++. +.|-.++=-....+...+.++.+....-+ +.+-.+..+|.++++++++....+++
T Consensus 14 lr~~~~e~a~~~-~~al~----~~Gi~~iEit~~t~~a~~~i~~l~~~~~~---~~vGAGTVl~~~~a~~a~~aGA~Fiv 85 (204)
T TIGR01182 14 IRIDDVDDALPL-AKALI----EGGLRVLEVTLRTPVALDAIRLLRKEVPD---ALIGAGTVLNPEQLRQAVDAGAQFIV 85 (204)
T ss_pred EecCCHHHHHHH-HHHHH----HcCCCEEEEeCCCccHHHHHHHHHHHCCC---CEEEEEeCCCHHHHHHHHHcCCCEEE
Confidence 333344444444 34444 45544432222334555555555322111 22234456788888888887777764
Q ss_pred EeccccccccccChHHHHHHHHhcCCcEEE
Q 040741 202 VMAVNNEIGVIQPMEEIGQICKEFKIPFHT 231 (457)
Q Consensus 202 i~~~~~~~G~~~~l~~i~~l~~~~~v~li~ 231 (457)
-++. -+++.+.|+++|++.+-
T Consensus 86 sP~~---------~~~v~~~~~~~~i~~iP 106 (204)
T TIGR01182 86 SPGL---------TPELAKHAQDHGIPIIP 106 (204)
T ss_pred CCCC---------CHHHHHHHHHcCCcEEC
Confidence 3332 24899999999998876
No 482
>PRK05973 replicative DNA helicase; Provisional
Probab=29.28 E-value=4.5e+02 Score=24.09 Aligned_cols=35 Identities=6% Similarity=-0.029 Sum_probs=17.9
Q ss_pred CceEEEEeccccccccccC------hHHHHHHHHhcCCcEE
Q 040741 196 DTGLISVMAVNNEIGVIQP------MEEIGQICKEFKIPFH 230 (457)
Q Consensus 196 ~t~li~i~~~~~~~G~~~~------l~~i~~l~~~~~v~li 230 (457)
+..+|+|...+.......+ +..|..+++++|+.++
T Consensus 147 ~~~lVVIDsLq~l~~~~~~~el~~~~~~Lk~~Ak~~gitvI 187 (237)
T PRK05973 147 RGTLVVIDYLQLLDQRREKPDLSVQVRALKSFARERGLIIV 187 (237)
T ss_pred CCCEEEEEcHHHHhhcccchhHHHHHHHHHHHHHhCCCeEE
Confidence 3456666665543221111 2335667777776655
No 483
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=28.94 E-value=3.7e+02 Score=24.32 Aligned_cols=99 Identities=18% Similarity=0.284 Sum_probs=57.7
Q ss_pred EEEeCChHHHHHHHHHHhhhhhcCCCCEE-----EEcCC-----CCcchHHHHHH-HHhcCcEEEEEeCCCCCCCCHHHH
Q 040741 121 IIFTSGATESNNVSIKGVMHFYKDKKRHV-----ITTQT-----EHKCVLDSCRH-LQQEGFEITYLPVGADGIVNLDEL 189 (457)
Q Consensus 121 i~~t~g~T~a~~~al~~~~~~~~~~g~~v-----i~~~~-----~h~~~~~~~~~-~~~~G~~v~~v~~~~~~~~d~~~l 189 (457)
+.+-|||-.++.++..++. .|..| +.++. .|....+.+.. ++.-|+.+..........-..++|
T Consensus 4 ~aL~SGGKDS~~Al~~a~~-----~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~~e~eve~L 78 (223)
T COG2102 4 IALYSGGKDSFYALYLALE-----EGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGEEEREVEEL 78 (223)
T ss_pred EEEEecCcHHHHHHHHHHH-----cCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCccchhhHHHH
Confidence 6777888888777666654 33222 12221 23334444443 344588888877664333456778
Q ss_pred HHhcCCCceEEEEeccccccccccC---hHHHHHHHHhcCCcEE
Q 040741 190 RAAIRPDTGLISVMAVNNEIGVIQP---MEEIGQICKEFKIPFH 230 (457)
Q Consensus 190 e~~i~~~t~li~i~~~~~~~G~~~~---l~~i~~l~~~~~v~li 230 (457)
.++++.=. +..+. +|.+.. ..++-.+|++.|+..+
T Consensus 79 ~~~l~~l~----~d~iv--~GaI~s~yqk~rve~lc~~lGl~~~ 116 (223)
T COG2102 79 KEALRRLK----VDGIV--AGAIASEYQKERVERLCEELGLKVY 116 (223)
T ss_pred HHHHHhCc----ccEEE--EchhhhHHHHHHHHHHHHHhCCEEe
Confidence 77776422 22221 566655 6789999999887665
No 484
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=28.70 E-value=4e+02 Score=25.06 Aligned_cols=71 Identities=18% Similarity=0.275 Sum_probs=43.0
Q ss_pred CCEEEEcCCCCcchHHHHHHHHhcCcEEEEE-eCCCCCCCCHHHHHHhc---C-CCceEEEEeccccccccccChHHHHH
Q 040741 146 KRHVITTQTEHKCVLDSCRHLQQEGFEITYL-PVGADGIVNLDELRAAI---R-PDTGLISVMAVNNEIGVIQPMEEIGQ 220 (457)
Q Consensus 146 g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v-~~~~~~~~d~~~le~~i---~-~~t~li~i~~~~~~~G~~~~l~~i~~ 220 (457)
+..+++ .|+.+...++.+ |+++..+ ....+..+.+.+|.+.+ + .+.++|+.+...++ +.+..
T Consensus 177 ~~~~v~---~H~af~Y~~~~y---Gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~~~ 243 (287)
T cd01137 177 KRKLVT---SEGAFSYFAKAY---GLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFVESTVND-------RLMKQ 243 (287)
T ss_pred cCEEEE---ecccHHHHHHHc---CCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCCh-------HHHHH
Confidence 456777 566555555555 9987754 33345556666666554 4 35667766554332 45667
Q ss_pred HHHhcCCcE
Q 040741 221 ICKEFKIPF 229 (457)
Q Consensus 221 l~~~~~v~l 229 (457)
++++.|+.+
T Consensus 244 ia~~~gv~v 252 (287)
T cd01137 244 VAKETGAKI 252 (287)
T ss_pred HHHHhCCcc
Confidence 888888764
No 485
>cd05126 Mth938 Mth938 domain. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. The function of the protein has not been determined.
Probab=28.70 E-value=1.4e+02 Score=23.98 Aligned_cols=50 Identities=10% Similarity=0.054 Sum_probs=36.8
Q ss_pred CCCHHHHHHhcCCCceEEEEeccccccccccChHHHHHHHHhcCCcEEEehh
Q 040741 183 IVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQICKEFKIPFHTDAA 234 (457)
Q Consensus 183 ~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~l~~~~~v~li~D~a 234 (457)
.+++++++..++.++.+|++.... .|...+-+++.+.+++.|+-+.+-.+
T Consensus 45 ~l~~~~l~~ll~~~peivliGTG~--~~~~~~~~~~~~~l~~~Gi~ve~m~T 94 (117)
T cd05126 45 GLQPEELEELLEEGVEVIVIGTGQ--SGALKVPPETVEKLEKRGVEVLVLPT 94 (117)
T ss_pred cCCHHHHHHHHhcCCCEEEEcCCC--CccccCCHHHHHHHHhcCCEEEEcCh
Confidence 478899999998888877775432 34445577888899999988887443
No 486
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.
Probab=28.66 E-value=2.8e+02 Score=25.41 Aligned_cols=69 Identities=19% Similarity=0.184 Sum_probs=42.4
Q ss_pred chHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccc---cChHHHHHHHHhcCCcEEEeh
Q 040741 158 CVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVI---QPMEEIGQICKEFKIPFHTDA 233 (457)
Q Consensus 158 ~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~---~~l~~i~~l~~~~~v~li~D~ 233 (457)
...++++.+-..|+.|-.+-.+ |+---+++.+-.-..| +.-.+|.|+- .+..-|..++++.++++|+|+
T Consensus 111 etl~Aae~Lv~eGF~VlPY~~~-----D~v~akrL~d~Gcaav--MPlgsPIGSg~Gi~n~~~l~~i~~~~~vPvIvDA 182 (247)
T PF05690_consen 111 ETLKAAEILVKEGFVVLPYCTD-----DPVLAKRLEDAGCAAV--MPLGSPIGSGRGIQNPYNLRIIIERADVPVIVDA 182 (247)
T ss_dssp HHHHHHHHHHHTT-EEEEEE-S------HHHHHHHHHTT-SEB--EEBSSSTTT---SSTHHHHHHHHHHGSSSBEEES
T ss_pred HHHHHHHHHHHCCCEEeecCCC-----CHHHHHHHHHCCCCEE--EecccccccCcCCCCHHHHHHHHHhcCCcEEEeC
Confidence 4566777777889999766544 6655555544444333 3344565533 445667777888899999998
No 487
>PRK00208 thiG thiazole synthase; Reviewed
Probab=28.48 E-value=3.9e+02 Score=24.66 Aligned_cols=72 Identities=11% Similarity=0.150 Sum_probs=40.7
Q ss_pred CcchHHHHHHHHh---cCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEE--eccccccccccChHHHHHHHHhcCCcEE
Q 040741 156 HKCVLDSCRHLQQ---EGFEITYLPVGADGIVNLDELRAAIRPDTGLISV--MAVNNEIGVIQPMEEIGQICKEFKIPFH 230 (457)
Q Consensus 156 h~~~~~~~~~~~~---~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i--~~~~~~~G~~~~l~~i~~l~~~~~v~li 230 (457)
.+-....++.++. .|+.+..+-.+ |+..-+++.+-...+|.. ..+.+..|.. +.+-|..+++..++++|
T Consensus 106 lpd~~~tv~aa~~L~~~Gf~vlpyc~~-----d~~~ak~l~~~G~~~vmPlg~pIGsg~gi~-~~~~i~~i~e~~~vpVI 179 (250)
T PRK00208 106 LPDPIETLKAAEILVKEGFVVLPYCTD-----DPVLAKRLEEAGCAAVMPLGAPIGSGLGLL-NPYNLRIIIEQADVPVI 179 (250)
T ss_pred CcCHHHHHHHHHHHHHCCCEEEEEeCC-----CHHHHHHHHHcCCCEeCCCCcCCCCCCCCC-CHHHHHHHHHhcCCeEE
Confidence 4445555555544 49999855555 676666655556656633 2333223322 23334445555689999
Q ss_pred Eeh
Q 040741 231 TDA 233 (457)
Q Consensus 231 ~D~ 233 (457)
+|+
T Consensus 180 vea 182 (250)
T PRK00208 180 VDA 182 (250)
T ss_pred EeC
Confidence 996
No 488
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=28.47 E-value=91 Score=28.76 Aligned_cols=28 Identities=21% Similarity=0.229 Sum_probs=23.5
Q ss_pred ccccChHHHHHHHHhcCCcEEEehhhhc
Q 040741 210 GVIQPMEEIGQICKEFKIPFHTDAAQAL 237 (457)
Q Consensus 210 G~~~~l~~i~~l~~~~~v~li~D~a~~~ 237 (457)
|-....+++.++.+++++-+++|++|-+
T Consensus 50 ~G~l~~e~l~~~l~e~~i~llIDATHPy 77 (257)
T COG2099 50 GGFLGAEGLAAFLREEGIDLLIDATHPY 77 (257)
T ss_pred cCcCCHHHHHHHHHHcCCCEEEECCChH
Confidence 3445578999999999999999999854
No 489
>PRK09622 porA pyruvate flavodoxin oxidoreductase subunit alpha; Reviewed
Probab=28.27 E-value=2.3e+02 Score=28.38 Aligned_cols=82 Identities=13% Similarity=0.196 Sum_probs=46.5
Q ss_pred HHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccC-hHHHHHHHHhc---CCcEEEehhh
Q 040741 160 LDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQP-MEEIGQICKEF---KIPFHTDAAQ 235 (457)
Q Consensus 160 ~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~-l~~i~~l~~~~---~v~li~D~a~ 235 (457)
..++..++..|.++..+.+..-..++.+.|.+.++...++++++... +.|..-+ +.++...+... +..++....+
T Consensus 283 ~ea~~~L~~~G~kvgvi~~r~~~Pfp~~~l~~~l~~~k~VvVvE~~~-~~Gg~G~l~~ev~~al~~~~~~~~~~v~~~~~ 361 (407)
T PRK09622 283 IVAAKEMRKEGIKAGVATIRVLRPFPYERLGQALKNLKALAILDRSS-PAGAMGALFNEVTSAVYQTQGTKHPVVSNYIY 361 (407)
T ss_pred HHHHHHHHhCCCCeEEEEeeEhhhCCHHHHHHHHhcCCEEEEEeCCC-CCCCccHHHHHHHHHHhccCcCCCceEeeeEE
Confidence 34445555567777776665445567788888886666677776654 3444433 44444433322 1455566666
Q ss_pred hcCCCcc
Q 040741 236 ALGKIPV 242 (457)
Q Consensus 236 ~~g~~~~ 242 (457)
+.|...+
T Consensus 362 g~gG~~~ 368 (407)
T PRK09622 362 GLGGRDM 368 (407)
T ss_pred CCCCCCC
Confidence 6555433
No 490
>PLN02784 alpha-amylase
Probab=27.96 E-value=1.2e+02 Score=33.29 Aligned_cols=82 Identities=15% Similarity=0.218 Sum_probs=51.4
Q ss_pred CCCEEEEcCCCC---------cchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccCh
Q 040741 145 KKRHVITTQTEH---------KCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPM 215 (457)
Q Consensus 145 ~g~~vi~~~~~h---------~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l 215 (457)
.+..|++..++. .....-+.++...|++.++++......- ...-...-+-.+++..|...++
T Consensus 500 ~~~eVmlQgF~Wds~~dg~w~~~I~ekldyL~~LG~taIWLpP~~~s~s---------~~GY~p~D~y~lds~yGT~~EL 570 (894)
T PLN02784 500 SGFEILCQGFNWESHKSGRWYMELGEKAAELSSLGFTVVWLPPPTESVS---------PEGYMPKDLYNLNSRYGTIDEL 570 (894)
T ss_pred CCceEEEEeEEcCcCCCCchHHHHHHHHHHHHHhCCCEEEeCCCCCCCC---------CCCcCcccccccCcCcCCHHHH
Confidence 355677655442 2334445566778999999986522210 0011111111233558999999
Q ss_pred HHHHHHHHhcCCcEEEehhh
Q 040741 216 EEIGQICKEFKIPFHTDAAQ 235 (457)
Q Consensus 216 ~~i~~l~~~~~v~li~D~a~ 235 (457)
+++++-||++|+.+++|.+.
T Consensus 571 k~LI~a~H~~GIkVIlDiVi 590 (894)
T PLN02784 571 KDLVKSFHEVGIKVLGDAVL 590 (894)
T ss_pred HHHHHHHHHCCCEEEEEECc
Confidence 99999999999999999873
No 491
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=27.82 E-value=42 Score=34.43 Aligned_cols=68 Identities=16% Similarity=0.213 Sum_probs=45.4
Q ss_pred chHHHHHHHHhcCcEEEEEeCCCCC-------CCCHHHHHHhcCCCceEEEEe------ccccccccccChHHHHHHHHh
Q 040741 158 CVLDSCRHLQQEGFEITYLPVGADG-------IVNLDELRAAIRPDTGLISVM------AVNNEIGVIQPMEEIGQICKE 224 (457)
Q Consensus 158 ~~~~~~~~~~~~G~~v~~v~~~~~~-------~~d~~~le~~i~~~t~li~i~------~~~~~~G~~~~l~~i~~l~~~ 224 (457)
.+.+-+.+++..|++.+++..-... .-++.+ ..-+. .+....|...+++++++-||+
T Consensus 23 ~I~~kldyl~~LGvtaIwl~P~~~~~~~~~~hgY~~~D----------~~~~~~~~~~~~id~~fGt~~dl~~Li~~~H~ 92 (479)
T PRK09441 23 RLAERAPELAEAGITAVWLPPAYKGTSGGYDVGYGVYD----------LFDLGEFDQKGTVRTKYGTKEELLNAIDALHE 92 (479)
T ss_pred HHHHHHHHHHHcCCCEEEeCCCccCCCCCCCCCCCeec----------ccccccccccCCcCcCcCCHHHHHHHHHHHHH
Confidence 4555566777789998888654111 011111 11111 244558999999999999999
Q ss_pred cCCcEEEehhh
Q 040741 225 FKIPFHTDAAQ 235 (457)
Q Consensus 225 ~~v~li~D~a~ 235 (457)
+|+.||+|.+.
T Consensus 93 ~Gi~vi~D~V~ 103 (479)
T PRK09441 93 NGIKVYADVVL 103 (479)
T ss_pred CCCEEEEEECc
Confidence 99999999884
No 492
>COG2022 ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
Probab=27.74 E-value=1.8e+02 Score=26.47 Aligned_cols=91 Identities=19% Similarity=0.166 Sum_probs=51.1
Q ss_pred CcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccc---cChHHHHHHHHhcCCcEEEe
Q 040741 156 HKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVI---QPMEEIGQICKEFKIPFHTD 232 (457)
Q Consensus 156 h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~---~~l~~i~~l~~~~~v~li~D 232 (457)
-....++++.+-..|+.|-..-.+ |+---+++.+ .....++.-..|.|+- ..-.-|.-+..+.++++|+|
T Consensus 116 ~~etl~Aae~Lv~eGF~VlPY~~d-----D~v~arrLee--~GcaavMPl~aPIGSg~G~~n~~~l~iiie~a~VPviVD 188 (262)
T COG2022 116 PIETLKAAEQLVKEGFVVLPYTTD-----DPVLARRLEE--AGCAAVMPLGAPIGSGLGLQNPYNLEIIIEEADVPVIVD 188 (262)
T ss_pred hHHHHHHHHHHHhCCCEEeeccCC-----CHHHHHHHHh--cCceEeccccccccCCcCcCCHHHHHHHHHhCCCCEEEe
Confidence 345566777777789988665433 4433333322 3345555566676644 33445555667779999999
Q ss_pred hhhhcCCCcccCCCCcccEEE
Q 040741 233 AAQALGKIPVDVEKWNVSLMS 253 (457)
Q Consensus 233 ~a~~~g~~~~~~~~~~~Di~~ 253 (457)
+--+..+-....-++|+|-+.
T Consensus 189 AGiG~pSdAa~aMElG~DaVL 209 (262)
T COG2022 189 AGIGTPSDAAQAMELGADAVL 209 (262)
T ss_pred CCCCChhHHHHHHhcccceee
Confidence 854433322222234555443
No 493
>PRK08329 threonine synthase; Validated
Probab=27.61 E-value=3.7e+02 Score=26.17 Aligned_cols=54 Identities=15% Similarity=0.244 Sum_probs=34.8
Q ss_pred CcEEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeC
Q 040741 119 KEIIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPV 178 (457)
Q Consensus 119 ~~i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~ 178 (457)
+.++..++|..+.-+|..+... +-+..|+++...-......+ +..|++++.++-
T Consensus 105 ~~vv~aSsGN~g~alA~~aa~~---G~~~~v~vp~~~~~~k~~~~---~~~GA~v~~v~~ 158 (347)
T PRK08329 105 NEVVIDSSGNAALSLALYSLSE---GIKVHVFVSYNASKEKISLL---SRLGAELHFVEG 158 (347)
T ss_pred CEEEEECCCcHHHHHHHHHHHc---CCcEEEEECCCChHHHHHHH---HHcCCEEEEECC
Confidence 4477777777777766665442 45677777765443344333 445999998874
No 494
>KOG1251 consensus Serine racemase [Signal transduction mechanisms; Amino acid transport and metabolism]
Probab=27.49 E-value=4.5e+02 Score=24.35 Aligned_cols=76 Identities=11% Similarity=0.251 Sum_probs=50.3
Q ss_pred EEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCCCCCCCCHHHHHHhcCCCceEE
Q 040741 121 IIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVGADGIVNLDELRAAIRPDTGLI 200 (457)
Q Consensus 121 i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~le~~i~~~t~li 200 (457)
++--+||-.|-.+++.+=.. +-...|+++...-.+-..+.+-. |+++++.+...+ |-+.+.+.+.+++..+
T Consensus 76 vithSSGNHaqAlalaAk~~---giPa~IVvP~~AP~~Kv~a~~~Y---ga~ii~~e~~~~---sRE~va~~ltee~g~~ 146 (323)
T KOG1251|consen 76 VITHSSGNHAQALALAAKIL---GIPATIVVPKDAPICKVAATRGY---GANIIFCEPTVE---SRESVAKDLTEETGYY 146 (323)
T ss_pred eEeecCCcHHHHHHHHHHhc---CCCeEEEecCCChHHHHHHHHhc---CceEEEecCccc---hHHHHHHHHHHhcCcE
Confidence 55555566555555554332 45678888887777776666544 999998875533 5677777788888777
Q ss_pred EEecc
Q 040741 201 SVMAV 205 (457)
Q Consensus 201 ~i~~~ 205 (457)
++..-
T Consensus 147 ~i~Py 151 (323)
T KOG1251|consen 147 LIHPY 151 (323)
T ss_pred EeCCC
Confidence 77543
No 495
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=27.40 E-value=3.6e+02 Score=25.49 Aligned_cols=53 Identities=15% Similarity=0.101 Sum_probs=36.5
Q ss_pred EEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC
Q 040741 121 IIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG 179 (457)
Q Consensus 121 i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~ 179 (457)
++-.++|..+.-++..+-.. +-+.+|+++...-......++.. |++++.++-+
T Consensus 61 vv~aSsGN~g~alA~~a~~~---G~~~~i~vp~~~~~~k~~~~~~~---GA~v~~~~~~ 113 (299)
T TIGR01136 61 IIEATSGNTGIALAMVAAAK---GYKLILTMPETMSLERRKLLRAY---GAELILTPAE 113 (299)
T ss_pred EEEeCCChHHHHHHHHHHHc---CCcEEEEECCCCCHHHHHHHHHc---CCEEEEeCCC
Confidence 67777788877776665432 55678888887666655555544 9999988743
No 496
>COG0157 NadC Nicotinate-nucleotide pyrophosphorylase [Coenzyme metabolism]
Probab=27.02 E-value=2.6e+02 Score=26.21 Aligned_cols=97 Identities=13% Similarity=0.182 Sum_probs=52.2
Q ss_pred CEEEEcCCCCcchHH----HHHHHHhc-CcEE-EEEeCCCCCCCCHHHHHHhcCCCceEEEEeccccccccccChHHHHH
Q 040741 147 RHVITTQTEHKCVLD----SCRHLQQE-GFEI-TYLPVGADGIVNLDELRAAIRPDTGLISVMAVNNEIGVIQPMEEIGQ 220 (457)
Q Consensus 147 ~~vi~~~~~h~~~~~----~~~~~~~~-G~~v-~~v~~~~~~~~d~~~le~~i~~~t~li~i~~~~~~~G~~~~l~~i~~ 220 (457)
|.|++ ..+|..... +++.++.. ++.+ +.+.++ ++++++++++....+|.+.+.. ...+++.++
T Consensus 159 Davli-KDNHia~~g~i~~Av~~aR~~~~~~~kIEVEve-----sle~~~eAl~agaDiImLDNm~-----~e~~~~av~ 227 (280)
T COG0157 159 DAVLI-KDNHIAAAGSITEAVRRARAAAPFTKKIEVEVE-----SLEEAEEALEAGADIIMLDNMS-----PEELKEAVK 227 (280)
T ss_pred ceEEe-hhhHHHHhccHHHHHHHHHHhCCCCceEEEEcC-----CHHHHHHHHHcCCCEEEecCCC-----HHHHHHHHH
Confidence 34444 346655554 55555332 4434 667776 7999999999999999998752 123444444
Q ss_pred HHHhcCCcEEEehhhhcCCCcc-cCCCCcccEEEec
Q 040741 221 ICKEFKIPFHTDAAQALGKIPV-DVEKWNVSLMSLS 255 (457)
Q Consensus 221 l~~~~~v~li~D~a~~~g~~~~-~~~~~~~Di~~~s 255 (457)
+.+..+ .+++-.+-++....+ .....++|+++.+
T Consensus 228 ~l~~~~-~~~lEaSGgIt~~ni~~yA~tGVD~IS~g 262 (280)
T COG0157 228 LLGLAG-RALLEASGGITLENIREYAETGVDVISVG 262 (280)
T ss_pred HhccCC-ceEEEEeCCCCHHHHHHHhhcCCCEEEeC
Confidence 432222 333333222111111 2334478887755
No 497
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=26.95 E-value=59 Score=24.30 Aligned_cols=21 Identities=33% Similarity=0.411 Sum_probs=18.4
Q ss_pred hHHHHHHHHhcCCcEEEehhh
Q 040741 215 MEEIGQICKEFKIPFHTDAAQ 235 (457)
Q Consensus 215 l~~i~~l~~~~~v~li~D~a~ 235 (457)
-.+|.++++++|++++.|..-
T Consensus 29 A~~I~~~A~e~~VPi~~~~~L 49 (82)
T TIGR00789 29 AERIIEIAKKHGIPIVEDPDL 49 (82)
T ss_pred HHHHHHHHHHcCCCEEeCHHH
Confidence 468999999999999999754
No 498
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=26.91 E-value=3.5e+02 Score=22.50 Aligned_cols=63 Identities=17% Similarity=0.269 Sum_probs=35.6
Q ss_pred CcEEEEEeCCC-CCCCCHHHHHHhcCCC-ceEEEEec-cccccccccChHHHHHHHHhcCCcEEEehhh
Q 040741 170 GFEITYLPVGA-DGIVNLDELRAAIRPD-TGLISVMA-VNNEIGVIQPMEEIGQICKEFKIPFHTDAAQ 235 (457)
Q Consensus 170 G~~v~~v~~~~-~~~~d~~~le~~i~~~-t~li~i~~-~~~~~G~~~~l~~i~~l~~~~~v~li~D~a~ 235 (457)
|+++..+-... +|. .++...|... ..+|+... +....+...+...|.+.|-+|+++++...+-
T Consensus 50 Gi~v~~vi~~~~gg~---~~i~~~I~~g~i~lVInt~dp~~~~~~~~D~~~IRR~Av~~~IP~~T~l~t 115 (142)
T PRK05234 50 GLDVTRLLSGPLGGD---QQIGALIAEGKIDMLIFFRDPLTAQPHDPDVKALLRLADVWNIPVATNRAT 115 (142)
T ss_pred CCeeEEEEcCCCCCc---hhHHHHHHcCceeEEEEecCCCCCCcccchHHHHHHHHHHcCCCEEcCHHH
Confidence 66666552121 232 3355555544 34443321 1333333456789999999999999977543
No 499
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=26.44 E-value=4.1e+02 Score=24.95 Aligned_cols=53 Identities=13% Similarity=0.127 Sum_probs=34.1
Q ss_pred EEEeCChHHHHHHHHHHhhhhhcCCCCEEEEcCCCCcchHHHHHHHHhcCcEEEEEeCC
Q 040741 121 IIFTSGATESNNVSIKGVMHFYKDKKRHVITTQTEHKCVLDSCRHLQQEGFEITYLPVG 179 (457)
Q Consensus 121 i~~t~g~T~a~~~al~~~~~~~~~~g~~vi~~~~~h~~~~~~~~~~~~~G~~v~~v~~~ 179 (457)
++-.++|..+.-++..+-.. +-..+|+++...-......++. .|++++.++.+
T Consensus 56 vv~~SsGN~g~alA~~a~~~---G~~~~i~vp~~~~~~k~~~~~~---~Ga~v~~~~~~ 108 (291)
T cd01561 56 IIEPTSGNTGIGLAMVAAAK---GYRFIIVMPETMSEEKRKLLRA---LGAEVILTPEA 108 (291)
T ss_pred EEEeCCChHHHHHHHHHHHc---CCeEEEEECCCCCHHHHHHHHH---cCCEEEEeCCC
Confidence 56666677776666554332 4567788877655555544444 49999998855
No 500
>PF07131 DUF1382: Protein of unknown function (DUF1382); InterPro: IPR009814 This entry is represented by Bacteriophage lambda, Xis. This entry overlaps with IPR009750, both representing lambda Xis. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical Escherichia coli and Bacteriophage lambda-like proteins of around 60 residues in length. The function of this family is unknown.
Probab=26.08 E-value=65 Score=22.16 Aligned_cols=32 Identities=25% Similarity=0.304 Sum_probs=26.3
Q ss_pred CCCeEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 040741 402 AHTSIRFGIGRFTTEAEVDRAIELTVKQVEKL 433 (457)
Q Consensus 402 ~~~~iRi~~~~~~t~edid~~~~~l~~~~~~~ 433 (457)
++..|||.+-...+++|...+-..+.+-++++
T Consensus 20 a~~GIRFVpiPv~~dee~~~L~s~~~~kLe~m 51 (61)
T PF07131_consen 20 AHIGIRFVPIPVVTDEEFHTLSSQLSQKLERM 51 (61)
T ss_pred HHcCceeeccccccHHHHHHHHHHHHHHHHHH
Confidence 34689999999899999998888888777665
Done!