Query 040744
Match_columns 440
No_of_seqs 163 out of 660
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 11:22:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040744.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040744hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05705 DUF829: Eukaryotic pr 100.0 6.6E-46 1.4E-50 357.6 23.3 234 166-429 1-240 (240)
2 KOG2521 Uncharacterized conser 100.0 2.3E-28 5E-33 246.8 13.2 254 162-435 36-293 (350)
3 PRK13604 luxD acyl transferase 99.5 2.6E-12 5.7E-17 128.9 17.9 219 162-433 35-260 (307)
4 COG1647 Esterase/lipase [Gener 99.3 3.7E-10 8.1E-15 107.5 18.8 226 162-431 13-243 (243)
5 PLN02652 hydrolase; alpha/beta 99.2 1.9E-09 4.1E-14 112.3 23.6 245 164-434 136-389 (395)
6 PLN02298 hydrolase, alpha/beta 99.2 1.3E-09 2.7E-14 109.4 21.2 237 164-435 59-320 (330)
7 PHA02857 monoglyceride lipase; 99.2 3.4E-09 7.3E-14 103.0 23.0 236 165-432 25-273 (276)
8 PF00326 Peptidase_S9: Prolyl 99.2 6E-10 1.3E-14 104.8 17.0 197 183-434 5-211 (213)
9 TIGR03611 RutD pyrimidine util 99.2 8.5E-10 1.8E-14 103.4 17.5 61 365-430 196-256 (257)
10 PRK10566 esterase; Provisional 99.2 4.1E-09 8.8E-14 100.8 22.2 61 367-432 186-248 (249)
11 PRK05077 frsA fermentation/res 99.2 2.9E-09 6.2E-14 111.5 20.9 236 142-433 170-413 (414)
12 TIGR02427 protocat_pcaD 3-oxoa 99.2 1.8E-09 3.9E-14 99.9 17.1 237 163-430 12-251 (251)
13 PLN02385 hydrolase; alpha/beta 99.2 5.3E-09 1.2E-13 106.1 21.9 65 365-432 277-345 (349)
14 TIGR01738 bioH putative pimelo 99.1 1.9E-09 4.1E-14 99.6 16.3 60 365-429 186-245 (245)
15 PF12695 Abhydrolase_5: Alpha/ 99.1 2.5E-09 5.4E-14 93.1 15.8 145 166-411 1-145 (145)
16 PRK10749 lysophospholipase L2; 99.1 2.1E-08 4.5E-13 101.2 24.1 68 364-431 256-328 (330)
17 TIGR01250 pro_imino_pep_2 prol 99.1 1.2E-08 2.7E-13 96.7 21.3 105 164-277 25-131 (288)
18 PLN02511 hydrolase 99.1 1.8E-09 3.9E-14 111.9 15.8 68 364-435 295-368 (388)
19 PF12697 Abhydrolase_6: Alpha/ 99.1 9.8E-09 2.1E-13 93.1 17.7 224 167-423 1-227 (228)
20 PRK10985 putative hydrolase; P 99.1 7.4E-08 1.6E-12 97.1 25.0 106 163-278 57-169 (324)
21 PRK11460 putative hydrolase; P 99.0 3.2E-08 7E-13 95.5 20.7 64 367-435 148-211 (232)
22 PRK11126 2-succinyl-6-hydroxy- 99.0 3.1E-08 6.7E-13 93.7 19.1 101 164-278 2-103 (242)
23 TIGR03695 menH_SHCHC 2-succiny 99.0 3.3E-08 7.1E-13 91.0 18.8 60 365-430 192-251 (251)
24 PRK14875 acetoin dehydrogenase 99.0 1.7E-08 3.7E-13 101.8 18.4 231 163-431 130-370 (371)
25 TIGR02240 PHA_depoly_arom poly 99.0 1.8E-08 3.9E-13 98.2 17.0 65 365-435 205-269 (276)
26 PF02230 Abhydrolase_2: Phosph 99.0 3E-08 6.4E-13 94.2 17.3 61 367-432 155-215 (216)
27 TIGR03343 biphenyl_bphD 2-hydr 99.0 8.8E-08 1.9E-12 92.7 20.7 61 365-430 221-281 (282)
28 PRK03592 haloalkane dehalogena 99.0 1.1E-07 2.4E-12 93.5 21.1 67 365-435 226-292 (295)
29 PLN02824 hydrolase, alpha/beta 98.9 9.9E-08 2.1E-12 93.8 19.7 62 365-431 232-293 (294)
30 PLN02442 S-formylglutathione h 98.9 3.2E-07 6.9E-12 91.1 23.1 222 133-433 26-274 (283)
31 KOG4391 Predicted alpha/beta h 98.9 1.2E-08 2.6E-13 97.2 11.9 255 109-434 20-284 (300)
32 PRK10673 acyl-CoA esterase; Pr 98.9 1.7E-07 3.6E-12 89.3 20.1 62 365-431 193-254 (255)
33 PRK10349 carboxylesterase BioH 98.9 8.5E-08 1.8E-12 92.1 17.6 62 365-431 194-255 (256)
34 PLN03087 BODYGUARD 1 domain co 98.9 2.9E-07 6.3E-12 98.2 22.5 63 366-432 417-479 (481)
35 PLN02965 Probable pheophorbida 98.9 2.6E-07 5.7E-12 89.2 20.2 239 165-432 4-253 (255)
36 COG0429 Predicted hydrolase of 98.9 2.2E-07 4.8E-12 93.6 19.6 293 104-434 25-342 (345)
37 PLN02679 hydrolase, alpha/beta 98.9 2.9E-07 6.2E-12 94.3 20.8 66 365-431 290-356 (360)
38 PLN02894 hydrolase, alpha/beta 98.8 4.9E-07 1.1E-11 94.3 22.2 69 365-438 323-391 (402)
39 COG1506 DAP2 Dipeptidyl aminop 98.8 5.5E-08 1.2E-12 106.8 15.7 212 165-435 395-619 (620)
40 TIGR01607 PST-A Plasmodium sub 98.8 4.8E-07 1E-11 91.8 20.9 63 366-430 269-331 (332)
41 PRK06489 hypothetical protein; 98.8 4.2E-07 9.1E-12 92.8 19.9 63 365-433 290-358 (360)
42 TIGR03056 bchO_mg_che_rel puta 98.8 8.6E-07 1.9E-11 84.8 20.7 61 365-430 218-278 (278)
43 COG2267 PldB Lysophospholipase 98.8 6.6E-07 1.4E-11 89.9 20.6 68 364-433 225-295 (298)
44 PF01738 DLH: Dienelactone hyd 98.8 3.1E-07 6.7E-12 86.9 17.1 182 163-432 13-217 (218)
45 TIGR02821 fghA_ester_D S-formy 98.8 1.4E-06 3.1E-11 85.8 22.5 47 367-413 211-258 (275)
46 PRK03204 haloalkane dehalogena 98.8 1.2E-06 2.5E-11 86.7 20.7 58 367-429 227-285 (286)
47 PLN02578 hydrolase 98.7 5.1E-07 1.1E-11 92.1 18.3 60 365-430 294-353 (354)
48 PLN02211 methyl indole-3-aceta 98.7 1.1E-06 2.3E-11 86.7 19.9 103 162-275 16-120 (273)
49 PRK00870 haloalkane dehalogena 98.7 6E-07 1.3E-11 88.8 17.2 65 364-431 236-300 (302)
50 PRK11071 esterase YqiA; Provis 98.7 7.5E-07 1.6E-11 83.5 16.6 55 366-430 135-189 (190)
51 TIGR03100 hydr1_PEP hydrolase, 98.7 2.6E-06 5.7E-11 83.9 21.1 238 163-430 25-273 (274)
52 TIGR01249 pro_imino_pep_1 prol 98.7 1.2E-06 2.7E-11 87.2 18.7 58 367-432 248-305 (306)
53 PRK05855 short chain dehydroge 98.6 5.8E-07 1.3E-11 96.0 15.7 62 366-433 232-293 (582)
54 KOG1838 Alpha/beta hydrolase [ 98.6 1.9E-06 4.2E-11 89.3 18.5 309 91-434 62-390 (409)
55 PRK08775 homoserine O-acetyltr 98.6 1.8E-06 4E-11 87.5 17.6 67 364-434 274-341 (343)
56 TIGR01392 homoserO_Ac_trn homo 98.6 1.7E-06 3.6E-11 88.0 17.2 65 365-430 286-351 (351)
57 PLN02980 2-oxoglutarate decarb 98.6 3E-06 6.4E-11 102.4 20.5 68 365-434 1566-1641(1655)
58 KOG1454 Predicted hydrolase/ac 98.6 1.2E-06 2.6E-11 89.2 14.6 61 367-432 264-324 (326)
59 TIGR01836 PHA_synth_III_C poly 98.5 3.4E-06 7.3E-11 85.9 16.8 64 365-431 284-349 (350)
60 COG0412 Dienelactone hydrolase 98.5 1.4E-05 3E-10 77.8 20.3 180 165-433 28-234 (236)
61 KOG1552 Predicted alpha/beta h 98.5 1.7E-06 3.6E-11 84.6 13.2 187 164-433 60-253 (258)
62 PRK00175 metX homoserine O-ace 98.5 9.3E-06 2E-10 83.8 19.0 72 364-436 306-378 (379)
63 PLN03084 alpha/beta hydrolase 98.5 1.7E-05 3.6E-10 82.6 20.5 60 365-430 323-382 (383)
64 PRK10162 acetyl esterase; Prov 98.5 2.3E-05 4.9E-10 79.2 20.7 223 164-433 81-316 (318)
65 KOG1455 Lysophospholipase [Lip 98.4 2E-05 4.3E-10 78.8 17.2 66 364-431 243-311 (313)
66 KOG2382 Predicted alpha/beta h 98.4 1.2E-05 2.5E-10 81.1 15.7 240 162-432 50-313 (315)
67 PF07859 Abhydrolase_3: alpha/ 98.3 5.6E-05 1.2E-09 70.5 18.7 205 167-414 1-211 (211)
68 PRK07581 hypothetical protein; 98.3 2.8E-05 6.1E-10 78.4 16.6 64 365-433 273-337 (339)
69 COG0400 Predicted esterase [Ge 98.2 3.5E-05 7.6E-10 73.7 15.0 60 367-432 146-205 (207)
70 PLN02872 triacylglycerol lipas 98.2 3.3E-05 7.1E-10 80.7 16.1 66 366-434 324-391 (395)
71 PF06500 DUF1100: Alpha/beta h 98.2 2.6E-05 5.7E-10 81.3 13.6 108 163-279 188-298 (411)
72 TIGR01840 esterase_phb esteras 98.1 8.4E-05 1.8E-09 70.2 15.1 107 163-277 12-130 (212)
73 PRK05371 x-prolyl-dipeptidyl a 98.1 0.00026 5.6E-09 79.9 20.3 71 364-435 452-522 (767)
74 PRK10115 protease 2; Provision 98.1 0.00017 3.6E-09 80.5 18.4 239 142-434 418-677 (686)
75 TIGR01838 PHA_synth_I poly(R)- 98.0 0.00018 3.9E-09 77.9 17.6 112 163-279 187-304 (532)
76 PRK07868 acyl-CoA synthetase; 98.0 0.00016 3.5E-09 83.8 18.3 66 364-433 294-362 (994)
77 TIGR03101 hydr2_PEP hydrolase, 97.9 0.0001 2.2E-09 73.2 11.9 106 164-278 25-135 (266)
78 KOG4409 Predicted hydrolase/ac 97.8 0.0023 5E-08 65.4 20.2 106 162-277 88-195 (365)
79 COG0596 MhpC Predicted hydrola 97.8 0.0017 3.6E-08 58.7 17.0 63 364-430 218-280 (282)
80 KOG2521 Uncharacterized conser 97.7 4.3E-06 9.4E-11 85.5 -1.1 277 7-298 1-284 (350)
81 PF03583 LIP: Secretory lipase 97.7 0.0076 1.7E-07 60.4 21.2 67 363-433 215-282 (290)
82 PF10503 Esterase_phd: Esteras 97.6 0.0029 6.3E-08 61.2 15.5 100 139-249 1-112 (220)
83 PF03959 FSH1: Serine hydrolas 97.6 0.0017 3.8E-08 61.8 13.7 169 163-409 3-200 (212)
84 PF00561 Abhydrolase_1: alpha/ 97.5 0.0014 3E-08 60.4 12.5 57 365-426 173-229 (230)
85 KOG2551 Phospholipase/carboxyh 97.5 0.001 2.2E-08 64.0 11.7 63 365-435 161-223 (230)
86 cd00707 Pancreat_lipase_like P 97.5 0.0007 1.5E-08 67.2 10.1 87 162-248 34-126 (275)
87 PLN00021 chlorophyllase 97.3 0.0022 4.7E-08 65.1 11.6 84 163-250 51-142 (313)
88 PF05677 DUF818: Chlamydia CHL 97.3 0.013 2.9E-07 59.9 16.9 149 111-279 89-257 (365)
89 KOG4667 Predicted esterase [Li 97.2 0.019 4.2E-07 55.4 16.1 234 142-427 12-253 (269)
90 COG3545 Predicted esterase of 97.2 0.012 2.7E-07 54.8 14.3 168 165-429 3-176 (181)
91 PF05448 AXE1: Acetyl xylan es 97.2 0.033 7.1E-07 56.8 18.5 233 137-431 52-319 (320)
92 PF06821 Ser_hydrolase: Serine 97.1 0.0064 1.4E-07 56.4 11.7 90 167-277 1-91 (171)
93 TIGR00976 /NonD putative hydro 97.0 0.0044 9.6E-08 67.3 11.6 106 163-279 21-134 (550)
94 COG0657 Aes Esterase/lipase [L 97.0 0.042 9.1E-07 54.9 17.8 208 162-417 77-293 (312)
95 COG2945 Predicted hydrolase of 97.0 0.038 8.2E-07 52.4 15.4 59 365-430 147-205 (210)
96 TIGR03230 lipo_lipase lipoprot 96.9 0.0099 2.2E-07 63.1 12.2 88 162-249 39-134 (442)
97 PF08538 DUF1749: Protein of u 96.7 0.019 4.1E-07 58.0 12.2 107 164-277 33-148 (303)
98 TIGR01839 PHA_synth_II poly(R) 96.7 0.11 2.5E-06 56.6 18.9 51 364-418 438-488 (560)
99 PF09752 DUF2048: Uncharacteri 96.7 0.089 1.9E-06 54.1 16.8 58 368-430 290-347 (348)
100 KOG2100 Dipeptidyl aminopeptid 96.6 0.041 8.8E-07 62.3 15.2 65 370-434 685-749 (755)
101 PF05990 DUF900: Alpha/beta hy 96.5 0.034 7.4E-07 54.0 11.8 116 162-278 16-137 (233)
102 PRK06765 homoserine O-acetyltr 96.4 0.0087 1.9E-07 62.5 7.9 66 365-431 321-387 (389)
103 TIGR01849 PHB_depoly_PhaZ poly 96.4 0.36 7.9E-06 50.9 19.6 67 365-431 335-405 (406)
104 PF08840 BAAT_C: BAAT / Acyl-C 96.4 0.042 9.1E-07 52.5 11.7 70 364-433 112-211 (213)
105 PF00151 Lipase: Lipase; Inte 96.4 0.0092 2E-07 61.1 7.6 101 162-269 69-182 (331)
106 COG4782 Uncharacterized protei 96.3 0.033 7.2E-07 57.3 10.8 114 162-278 114-235 (377)
107 COG1073 Hydrolases of the alph 96.0 0.015 3.2E-07 55.7 6.4 64 368-433 233-298 (299)
108 PF05728 UPF0227: Uncharacteri 95.7 0.46 1E-05 44.8 14.9 55 366-430 133-187 (187)
109 PF01674 Lipase_2: Lipase (cla 95.6 0.03 6.4E-07 54.2 6.6 89 164-252 1-93 (219)
110 COG4757 Predicted alpha/beta h 95.5 0.93 2E-05 44.5 16.1 255 143-430 8-278 (281)
111 KOG3043 Predicted hydrolase re 95.2 0.75 1.6E-05 44.8 14.6 80 165-248 40-134 (242)
112 PF07819 PGAP1: PGAP1-like pro 95.1 0.25 5.4E-06 47.8 11.2 108 163-278 3-124 (225)
113 KOG2281 Dipeptidyl aminopeptid 95.1 0.36 7.7E-06 53.2 13.2 63 369-431 804-866 (867)
114 COG3208 GrsT Predicted thioest 95.1 3.9 8.4E-05 40.3 19.4 228 163-435 5-239 (244)
115 PF00975 Thioesterase: Thioest 94.9 0.19 4.1E-06 47.1 9.8 102 165-277 1-105 (229)
116 KOG2112 Lysophospholipase [Lip 94.9 0.5 1.1E-05 45.3 12.3 60 367-431 144-203 (206)
117 PF12715 Abhydrolase_7: Abhydr 94.8 0.051 1.1E-06 56.5 6.0 107 162-278 113-261 (390)
118 KOG4178 Soluble epoxide hydrol 94.6 3.3 7.1E-05 42.4 18.2 106 162-278 42-149 (322)
119 PF05057 DUF676: Putative seri 94.4 0.29 6.2E-06 46.9 9.7 88 164-255 4-99 (217)
120 PF06028 DUF915: Alpha/beta hy 94.4 0.95 2E-05 44.8 13.5 63 366-429 183-252 (255)
121 TIGR03502 lipase_Pla1_cef extr 94.1 0.29 6.3E-06 55.6 10.4 39 163-202 448-486 (792)
122 COG4099 Predicted peptidase [G 93.7 1.1 2.3E-05 45.5 12.3 39 368-406 316-354 (387)
123 KOG2984 Predicted hydrolase [G 92.8 0.14 3E-06 49.2 4.4 63 364-431 213-275 (277)
124 PF06342 DUF1057: Alpha/beta h 92.5 11 0.00024 38.1 17.4 99 166-279 37-139 (297)
125 KOG1515 Arylacetamide deacetyl 92.5 15 0.00032 38.0 19.8 225 163-431 89-334 (336)
126 PF02129 Peptidase_S15: X-Pro 91.8 0.79 1.7E-05 45.0 8.5 107 163-280 19-139 (272)
127 COG3571 Predicted hydrolase of 91.2 8.6 0.00019 36.0 13.8 106 164-279 14-126 (213)
128 COG1505 Serine proteases of th 90.8 1 2.2E-05 49.3 8.8 212 169-433 424-647 (648)
129 KOG2564 Predicted acetyltransf 90.3 2.1 4.5E-05 43.2 9.7 86 162-248 72-160 (343)
130 cd00312 Esterase_lipase Estera 89.5 1.3 2.9E-05 47.0 8.4 127 135-279 74-215 (493)
131 KOG4627 Kynurenine formamidase 89.1 1 2.2E-05 43.6 6.3 188 162-421 65-261 (270)
132 PF08386 Abhydrolase_4: TAP-li 89.1 1.2 2.7E-05 37.6 6.3 60 367-431 34-93 (103)
133 PF12048 DUF3530: Protein of u 85.7 7.5 0.00016 39.5 10.8 106 164-276 87-228 (310)
134 PF12740 Chlorophyllase2: Chlo 85.1 9 0.0002 38.1 10.7 106 165-278 18-131 (259)
135 KOG1553 Predicted alpha/beta h 85.1 2.2 4.8E-05 44.1 6.4 39 232-279 309-347 (517)
136 PRK10439 enterobactin/ferric e 84.9 56 0.0012 34.5 17.5 39 370-410 351-390 (411)
137 COG1075 LipA Predicted acetylt 84.7 2.1 4.5E-05 43.9 6.3 105 163-279 58-166 (336)
138 COG3458 Acetyl esterase (deace 84.6 7.5 0.00016 39.2 9.7 124 141-278 57-211 (321)
139 PF00756 Esterase: Putative es 83.0 2.4 5.1E-05 40.4 5.5 49 219-275 96-148 (251)
140 PF02273 Acyl_transf_2: Acyl t 82.8 44 0.00095 33.4 14.0 218 162-433 28-253 (294)
141 COG3243 PhaC Poly(3-hydroxyalk 81.8 2.4 5.2E-05 44.9 5.3 52 364-419 327-378 (445)
142 PF00135 COesterase: Carboxyle 81.8 5 0.00011 42.5 8.0 126 136-278 105-246 (535)
143 COG3509 LpqC Poly(3-hydroxybut 81.6 6.6 0.00014 39.8 8.2 101 138-249 46-159 (312)
144 PRK04940 hypothetical protein; 81.6 48 0.001 31.3 15.7 53 370-431 127-179 (180)
145 PF02089 Palm_thioest: Palmito 81.5 7.8 0.00017 39.0 8.7 105 162-278 3-117 (279)
146 PF10230 DUF2305: Uncharacteri 79.4 34 0.00074 33.7 12.5 43 367-410 221-263 (266)
147 cd00519 Lipase_3 Lipase (class 76.6 21 0.00046 33.8 9.8 105 164-278 62-169 (229)
148 PRK10252 entF enterobactin syn 75.7 18 0.00039 43.1 10.9 100 164-277 1068-1172(1296)
149 PF12146 Hydrolase_4: Putative 75.6 5.3 0.00011 32.2 4.5 35 164-202 16-53 (79)
150 PF01764 Lipase_3: Lipase (cla 74.3 15 0.00033 31.5 7.6 59 219-278 48-107 (140)
151 PF07224 Chlorophyllase: Chlor 70.8 29 0.00063 34.9 9.2 81 163-250 45-136 (307)
152 PF03403 PAF-AH_p_II: Platelet 68.5 31 0.00068 36.0 9.5 38 164-202 100-137 (379)
153 KOG2029 Uncharacterized conser 68.1 18 0.00038 40.1 7.6 46 233-278 525-573 (697)
154 COG4814 Uncharacterized protei 67.5 19 0.0004 36.1 7.0 63 366-430 215-285 (288)
155 PF00450 Peptidase_S10: Serine 62.9 38 0.00081 34.8 8.8 64 215-279 113-183 (415)
156 PLN02733 phosphatidylcholine-s 61.2 30 0.00064 37.1 7.8 92 179-278 108-202 (440)
157 cd00741 Lipase Lipase. Lipase 60.8 34 0.00075 30.2 7.1 43 233-278 27-69 (153)
158 PF06057 VirJ: Bacterial virul 58.2 59 0.0013 31.0 8.4 85 184-278 21-107 (192)
159 PF02450 LCAT: Lecithin:choles 56.4 46 0.001 34.8 8.2 93 180-278 66-161 (389)
160 PF11187 DUF2974: Protein of u 55.8 24 0.00053 34.1 5.6 55 220-279 70-125 (224)
161 COG4188 Predicted dienelactone 55.2 39 0.00083 35.4 7.1 85 165-250 72-175 (365)
162 COG3319 Thioesterase domains o 53.8 1E+02 0.0023 30.6 9.7 100 165-277 1-104 (257)
163 PTZ00472 serine carboxypeptida 51.6 68 0.0015 34.5 8.6 63 215-278 148-217 (462)
164 PF11144 DUF2920: Protein of u 48.8 31 0.00068 36.5 5.4 36 370-405 296-331 (403)
165 PF10340 DUF2424: Protein of u 47.0 2.8E+02 0.0061 29.2 12.0 111 163-278 121-236 (374)
166 PF05277 DUF726: Protein of un 46.2 91 0.002 32.4 8.2 50 233-286 219-268 (345)
167 PLN02606 palmitoyl-protein thi 44.9 1.5E+02 0.0032 30.3 9.4 106 163-277 25-132 (306)
168 COG0552 FtsY Signal recognitio 41.8 2.8E+02 0.0061 28.8 10.8 102 162-284 136-239 (340)
169 PF06309 Torsin: Torsin; Inte 41.6 1.8E+02 0.0039 25.9 8.3 33 162-194 49-83 (127)
170 PLN02633 palmitoyl protein thi 40.5 2.1E+02 0.0046 29.4 9.7 107 162-277 23-131 (314)
171 KOG2541 Palmitoyl protein thio 35.1 3.2E+02 0.0069 27.8 9.7 104 165-278 24-129 (296)
172 PF11339 DUF3141: Protein of u 33.9 52 0.0011 36.1 4.3 60 364-423 294-363 (581)
173 COG2021 MET2 Homoserine acetyl 33.7 1E+02 0.0023 32.3 6.3 61 366-431 305-367 (368)
174 PLN02454 triacylglycerol lipas 33.4 1.4E+02 0.003 31.9 7.3 60 218-277 209-271 (414)
175 KOG1551 Uncharacterized conser 32.8 70 0.0015 32.4 4.7 58 371-433 310-367 (371)
176 TIGR03596 GTPase_YlqF ribosome 32.6 4.2E+02 0.0091 26.1 10.4 74 164-249 48-134 (276)
177 KOG2624 Triglyceride lipase-ch 32.3 95 0.0021 32.9 5.9 65 367-432 332-398 (403)
178 PF00701 DHDPS: Dihydrodipicol 31.4 2.7E+02 0.0059 27.5 8.8 92 169-276 73-165 (289)
179 PF08237 PE-PPE: PE-PPE domain 31.2 3.7E+02 0.008 26.0 9.4 85 192-279 2-91 (225)
180 KOG3253 Predicted alpha/beta h 30.9 1.1E+02 0.0023 34.5 6.0 47 367-416 304-350 (784)
181 COG2272 PnbA Carboxylesterase 30.8 2.5E+02 0.0055 30.6 8.8 105 132-249 72-195 (491)
182 COG2819 Predicted hydrolase of 29.3 88 0.0019 31.3 4.8 43 210-252 109-155 (264)
183 PF01083 Cutinase: Cutinase; 29.2 72 0.0016 29.6 4.0 59 218-278 64-123 (179)
184 PF08255 Leader_Trp: Trp-opero 28.0 50 0.0011 18.3 1.6 10 165-174 2-11 (14)
185 PF11288 DUF3089: Protein of u 27.7 1.1E+02 0.0025 29.4 5.1 54 219-274 78-134 (207)
186 PLN00413 triacylglycerol lipas 27.0 1.4E+02 0.0031 32.3 6.2 58 220-277 269-328 (479)
187 KOG2624 Triglyceride lipase-ch 27.0 1.4E+02 0.0031 31.6 6.2 109 162-277 71-199 (403)
188 PF06309 Torsin: Torsin; Inte 26.6 1.8E+02 0.0039 25.9 5.8 38 219-256 35-77 (127)
189 KOG4388 Hormone-sensitive lipa 26.1 2.4E+02 0.0053 31.7 7.7 115 153-277 384-508 (880)
190 PF06441 EHN: Epoxide hydrolas 26.1 37 0.0008 29.4 1.3 16 162-177 90-105 (112)
191 KOG0780 Signal recognition par 25.6 7E+02 0.015 26.8 10.6 43 159-201 95-138 (483)
192 KOG1014 17 beta-hydroxysteroid 25.1 2.2E+02 0.0048 29.2 6.8 88 175-278 56-143 (312)
193 TIGR00632 vsr DNA mismatch end 24.3 2.4E+02 0.0052 24.8 6.1 57 138-199 35-114 (117)
194 PF09994 DUF2235: Uncharacteri 24.0 3.3E+02 0.0072 27.0 7.9 77 179-257 21-114 (277)
195 KOG2369 Lecithin:cholesterol a 24.0 2.9E+02 0.0063 30.0 7.7 72 179-252 124-200 (473)
196 cd00032 CASc Caspase, interleu 24.0 4.5E+02 0.0097 25.4 8.7 88 178-280 31-132 (243)
197 cd01841 NnaC_like NnaC (CMP-Ne 23.6 4.3E+02 0.0094 23.2 8.0 43 164-206 22-65 (174)
198 PF01674 Lipase_2: Lipase (cla 22.4 1.6E+02 0.0035 28.4 5.2 64 368-434 2-71 (219)
199 PLN02213 sinapoylglucose-malat 22.2 4.3E+02 0.0093 26.7 8.5 85 193-278 2-97 (319)
200 PF07519 Tannase: Tannase and 22.2 1.6E+02 0.0034 31.8 5.5 63 368-430 354-425 (474)
201 PF00326 Peptidase_S9: Prolyl 21.9 3.6E+02 0.0077 24.7 7.3 40 163-202 143-184 (213)
202 COG2936 Predicted acyl esteras 21.3 1.3E+02 0.0029 33.3 4.7 82 187-279 75-161 (563)
203 PLN02934 triacylglycerol lipas 21.1 2.6E+02 0.0056 30.7 6.7 30 220-249 306-336 (515)
204 PF13401 AAA_22: AAA domain; P 20.8 4.9E+02 0.011 21.5 7.7 88 164-275 3-96 (131)
205 cd03131 GATase1_HTS Type 1 glu 20.6 2.9E+02 0.0063 25.8 6.3 62 371-433 33-95 (175)
206 PTZ00445 p36-lilke protein; Pr 20.4 1.7E+02 0.0036 28.6 4.7 64 179-244 29-102 (219)
No 1
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=100.00 E-value=6.6e-46 Score=357.61 Aligned_cols=234 Identities=35% Similarity=0.580 Sum_probs=168.0
Q ss_pred eEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhc----CCcEEEEEe
Q 040744 166 TVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDE----GKNLVFHTF 241 (440)
Q Consensus 166 plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~----~~~Il~H~F 241 (440)
|||||+||+||++||++||+++|++.|+++|+++.|..+++... +.++.+++.+.+.+.+. ..+|+||+|
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~------~~~~~~~~~l~~~l~~~~~~~~~~il~H~F 74 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS------KRLAPAADKLLELLSDSQSASPPPILFHSF 74 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec------cchHHHHHHHHHHhhhhccCCCCCEEEEEE
Confidence 79999999999999999999999999999999999987776543 12233444444444433 249999999
Q ss_pred cccHHHHHHHHHHHHhhcC--CCCccCceEEEecCCCCCCCChhhhhhhhhHHhhccccccccccccccccchhhhhccc
Q 040744 242 SNTGWLTYGAILEKFQNKD--PSLMGRIRGCIVDSAPVASPDPQVWASGFSAAFLKKNSVATKGIVYTNELETDELVGSR 319 (440)
Q Consensus 242 SnGG~~~~~~Ll~~l~~~~--~~l~~~VkG~I~DSaPg~~~~~~~~a~gfsaa~l~~~s~~~~~~~~~~~~~l~~~v~~~ 319 (440)
||||++.+.++++.+++.+ ..+.++|+|+||||||+.... .....++++++.+... ..++.
T Consensus 75 SnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~-~~~~~~~~~~~~~~~~--------------~~~~~-- 137 (240)
T PF05705_consen 75 SNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTY-SSSARAFSAALPKSSP--------------RWFVP-- 137 (240)
T ss_pred ECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCcccc-ccHHHHHHHHcCccch--------------hhHHH--
Confidence 9999999999998887765 455677999999999998642 2233344433211100 00000
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcccCCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCc
Q 040744 320 ASGEPKPAVTETALLVVLEKFFEVILHLPAVNRRLSDVLGLLSSGQPACPQLYIYSSADRVIPAESVESFIEEQRKAGRE 399 (440)
Q Consensus 320 ~~~~p~~~~~~~~ll~~l~~~f~~~~~~p~~~~rl~~~~~~l~~~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~ 399 (440)
...+...++ .+..+.......+.......+.++.+...+.++|+|||||++|++|||++||+|++++|++|.+
T Consensus 138 -----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~ 210 (240)
T PF05705_consen 138 -----LWPLLQFLL--RLSIISYFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWD 210 (240)
T ss_pred -----HHHHHHHHH--HHHHHHHHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCe
Confidence 000111000 1111222222333333333344555556777899999999999999999999999999999999
Q ss_pred eEEEEeCCCccccccccChHHHHHHHHHHH
Q 040744 400 VRACNFVSTPHVDHFRNDPKLYTTQLSQFL 429 (440)
Q Consensus 400 V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL 429 (440)
|+.++|++|+||+|+|.||+|||++|++||
T Consensus 211 V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 211 VRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred EEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 999999999999999999999999999997
No 2
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.95 E-value=2.3e-28 Score=246.83 Aligned_cols=254 Identities=28% Similarity=0.403 Sum_probs=157.9
Q ss_pred CCCCeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCceeecc-cchhhhHH-HHHHHHHHHHHhhhcCCcEEEE
Q 040744 162 MKSRTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQ-VGGKAEQN-IELLVNHLADCLEDEGKNLVFH 239 (440)
Q Consensus 162 ~~~~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~-~g~k~~k~-l~~l~~~i~~~l~~~~~~Il~H 239 (440)
+++++||+++||+||.+|++.||+++|++.|+.|+.+++|........ .+...... .+.+...+.++ ..++.||+||
T Consensus 36 ~s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~-~~~~~pi~fh 114 (350)
T KOG2521|consen 36 ESEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDY-NSDPCPIIFH 114 (350)
T ss_pred CccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhc-cCCcCceEEE
Confidence 345799999999999999999999999999999999999976554322 22211111 12222222222 2347899999
Q ss_pred EecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChh-hhhhhhhHHhhccccccccccccccccchhhhhcc
Q 040744 240 TFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQ-VWASGFSAAFLKKNSVATKGIVYTNELETDELVGS 318 (440)
Q Consensus 240 ~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~-~~a~gfsaa~l~~~s~~~~~~~~~~~~~l~~~v~~ 318 (440)
.|||||...+..+....++..+...+...|+||||+|+....-+ .|+-.|+. ... ...-++.+.+... ...
T Consensus 115 ~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~-----~~~--~~~~~~~~~~~~i-~~~ 186 (350)
T KOG2521|consen 115 VFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSS-----PPD--DYVARWARLNYHI-TLL 186 (350)
T ss_pred EecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceecccc-----Cch--hhHHHHHhcCeEE-EEE
Confidence 99999999998885555544345567788899999999843111 11111110 000 0000000000000 000
Q ss_pred ccCCCCCchHHHHHHHHHHHHHHHHHhhhhhhhhhhhh-hhhhcccCCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcC
Q 040744 319 RASGEPKPAVTETALLVVLEKFFEVILHLPAVNRRLSD-VLGLLSSGQPACPQLYIYSSADRVIPAESVESFIEEQRKAG 397 (440)
Q Consensus 319 ~~~~~p~~~~~~~~ll~~l~~~f~~~~~~p~~~~rl~~-~~~~l~~~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G 397 (440)
... .+......+-+.+.+. . . .....+.+ +.+. .....+++||+||++|.++|++++|++++.++++|
T Consensus 187 ~~~---~~~~~~~~~~~~~~~~-~--~---~r~~~~~~r~~~~--~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g 255 (350)
T KOG2521|consen 187 TMA---GNEGGAYLLGPLAEKI-S--M---SRKYHFLDRYEEQ--RNELPWNQLYLYSDNDDVLPADEIEKFIALRREKG 255 (350)
T ss_pred Eee---ecccchhhhhhhhhcc-c--c---ccchHHHHHHHhh--hhcccccceeecCCccccccHHHHHHHHHHHHhcC
Confidence 000 0000000000011110 0 0 00000111 1111 12236899999999999999999999999999999
Q ss_pred CceEEEEeCCCccccccccChHHHHHHHHHHHHHHHhh
Q 040744 398 REVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDYVVT 435 (440)
Q Consensus 398 ~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~~~~ 435 (440)
+.|...+|+||+||+|+|.||..|++++.+|++++...
T Consensus 256 ~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~ 293 (350)
T KOG2521|consen 256 VNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVISS 293 (350)
T ss_pred ceEEEeeccCccceeeeccCcHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999999999999988643
No 3
>PRK13604 luxD acyl transferase; Provisional
Probab=99.46 E-value=2.6e-12 Score=128.88 Aligned_cols=219 Identities=15% Similarity=0.199 Sum_probs=122.0
Q ss_pred CCCCeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCC--Cc--e-e-ecccchhhhHHHHHHHHHHHHHhhhc-CC
Q 040744 162 MKSRTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPM--AE--I-L-SYQVGGKAEQNIELLVNHLADCLEDE-GK 234 (440)
Q Consensus 162 ~~~~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~--~~--i-l-~~~~g~k~~k~l~~l~~~i~~~l~~~-~~ 234 (440)
.+.+++|+.||+.+.+ .+..+|++.+.++||+|++|+++- .+ - + ..+... ...++..++++ ++.. ..
T Consensus 35 ~~~~~vIi~HGf~~~~-~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~-g~~Dl~aaid~----lk~~~~~ 108 (307)
T PRK13604 35 KKNNTILIASGFARRM-DHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSI-GKNSLLTVVDW----LNTRGIN 108 (307)
T ss_pred CCCCEEEEeCCCCCCh-HHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcccc-cHHHHHHHHHH----HHhcCCC
Confidence 3457899999999966 579999999999999999999752 11 0 0 011111 12333344444 4443 56
Q ss_pred cEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhhhhhhHHhhccccccccccccccccchhh
Q 040744 235 NLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWASGFSAAFLKKNSVATKGIVYTNELETDE 314 (440)
Q Consensus 235 ~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~gfsaa~l~~~s~~~~~~~~~~~~~l~~ 314 (440)
+|+++|+||||++++ +. ... .+++++|.||++...+ +.+...+...+. +.... .++
T Consensus 109 ~I~LiG~SmGgava~---~~--A~~-----~~v~~lI~~sp~~~l~--d~l~~~~~~~~~-~~p~~----------~lp- 164 (307)
T PRK13604 109 NLGLIAASLSARIAY---EV--INE-----IDLSFLITAVGVVNLR--DTLERALGYDYL-SLPID----------ELP- 164 (307)
T ss_pred ceEEEEECHHHHHHH---HH--hcC-----CCCCEEEEcCCcccHH--HHHHHhhhcccc-cCccc----------ccc-
Confidence 899999999999852 11 111 3599999999888753 122111111000 00000 000
Q ss_pred hhccccCCCCCchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcccCCCCCCEEEEEcCCCCccCHHHHHHHHHHHH
Q 040744 315 LVGSRASGEPKPAVTETALLVVLEKFFEVILHLPAVNRRLSDVLGLLSSGQPACPQLYIYSSADRVIPAESVESFIEEQR 394 (440)
Q Consensus 315 ~v~~~~~~~p~~~~~~~~ll~~l~~~f~~~~~~p~~~~rl~~~~~~l~~~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r 394 (440)
....+. ... . ....|+.....+ .+. ......+.+ ...+.|.|+|||++|++||.++++++++..+
T Consensus 165 --~~~d~~-g~~-l-------~~~~f~~~~~~~-~~~-~~~s~i~~~--~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~ 229 (307)
T PRK13604 165 --EDLDFE-GHN-L-------GSEVFVTDCFKH-GWD-TLDSTINKM--KGLDIPFIAFTANNDSWVKQSEVIDLLDSIR 229 (307)
T ss_pred --cccccc-ccc-c-------cHHHHHHHHHhc-Ccc-ccccHHHHH--hhcCCCEEEEEcCCCCccCHHHHHHHHHHhc
Confidence 000000 000 0 001121111110 000 001111222 2245899999999999999999999999764
Q ss_pred HcCCceEEEEeCCCccccccccChHHHHHHHHHHHHHHH
Q 040744 395 KAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDYV 433 (440)
Q Consensus 395 ~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~~ 433 (440)
. .+.+.+.++|+.|.=+ .+ .-.+++|.+...
T Consensus 230 s--~~kkl~~i~Ga~H~l~--~~----~~~~~~~~~~~~ 260 (307)
T PRK13604 230 S--EQCKLYSLIGSSHDLG--EN----LVVLRNFYQSVT 260 (307)
T ss_pred c--CCcEEEEeCCCccccC--cc----hHHHHHHHHHHH
Confidence 3 3577899999999743 22 234566666544
No 4
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.27 E-value=3.7e-10 Score=107.54 Aligned_cols=226 Identities=16% Similarity=0.200 Sum_probs=134.1
Q ss_pred CCCCeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCceee---cccchhhhHHHHHHHHHHHHHhhhcCCcEEE
Q 040744 162 MKSRTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILS---YQVGGKAEQNIELLVNHLADCLEDEGKNLVF 238 (440)
Q Consensus 162 ~~~~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~---~~~g~k~~k~l~~l~~~i~~~l~~~~~~Il~ 238 (440)
++++.|.+|||++|+. +.+..-++..++.||+|....+|-..... ...+.+ ...+++.+...+..++....|.+
T Consensus 13 ~G~~AVLllHGFTGt~-~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~--DW~~~v~d~Y~~L~~~gy~eI~v 89 (243)
T COG1647 13 GGNRAVLLLHGFTGTP-RDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPR--DWWEDVEDGYRDLKEAGYDEIAV 89 (243)
T ss_pred cCCEEEEEEeccCCCc-HHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHH--HHHHHHHHHHHHHHHcCCCeEEE
Confidence 3448999999999965 66777777778999999998887432111 122221 11223333332222344889999
Q ss_pred EEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhhhhhhH--Hhhccccccccccccccccchhhhh
Q 040744 239 HTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWASGFSA--AFLKKNSVATKGIVYTNELETDELV 316 (440)
Q Consensus 239 H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~gfsa--a~l~~~s~~~~~~~~~~~~~l~~~v 316 (440)
-|+||||-+++ .+..+ -++|++|.=|+|....+......++-. ..+++
T Consensus 90 ~GlSmGGv~al-----kla~~-----~p~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk-------------------- 139 (243)
T COG1647 90 VGLSMGGVFAL-----KLAYH-----YPPKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKK-------------------- 139 (243)
T ss_pred EeecchhHHHH-----HHHhh-----CCccceeeecCCcccccchhhhHHHHHHHHHhhh--------------------
Confidence 99999999873 12222 358999999999874332222222211 00110
Q ss_pred ccccCCCCCchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcccCCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHc
Q 040744 317 GSRASGEPKPAVTETALLVVLEKFFEVILHLPAVNRRLSDVLGLLSSGQPACPQLYIYSSADRVIPAESVESFIEEQRKA 396 (440)
Q Consensus 317 ~~~~~~~p~~~~~~~~ll~~l~~~f~~~~~~p~~~~rl~~~~~~l~~~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~ 396 (440)
+.++.......-+..+-........ .+.+-..++.+.+ .....|.|.+-|+.|.+||.+.++-+++.....
T Consensus 140 ----~e~k~~e~~~~e~~~~~~~~~~~~~---~~~~~i~~~~~~~--~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~ 210 (243)
T COG1647 140 ----YEGKDQEQIDKEMKSYKDTPMTTTA---QLKKLIKDARRSL--DKIYSPTLVVQGRQDEMVPAESANFIYDHVESD 210 (243)
T ss_pred ----ccCCCHHHHHHHHHHhhcchHHHHH---HHHHHHHHHHhhh--hhcccchhheecccCCCCCHHHHHHHHHhccCC
Confidence 0001111111000000000000000 0000011111222 234579999999999999999999999876443
Q ss_pred CCceEEEEeCCCccccccccChHHHHHHHHHHHHH
Q 040744 397 GREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLED 431 (440)
Q Consensus 397 G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~ 431 (440)
+.+.+.+++|.||--.-...+.=.+.|..||++
T Consensus 211 --~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 211 --DKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred --cceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 567888999999999999999999999999973
No 5
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.23 E-value=1.9e-09 Score=112.27 Aligned_cols=245 Identities=15% Similarity=0.112 Sum_probs=128.9
Q ss_pred CCeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCceeecccch--hhhHHHHHHHHHHHHHhhhc--CCcEEEE
Q 040744 164 SRTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGG--KAEQNIELLVNHLADCLEDE--GKNLVFH 239 (440)
Q Consensus 164 ~~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~--k~~k~l~~l~~~i~~~l~~~--~~~Il~H 239 (440)
..+||++|||.+... ....+++.+.+.||+|+.++.+-...-....+. ..+...+++...+ +.+..+ ..++++.
T Consensus 136 ~~~Vl~lHG~~~~~~-~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l-~~l~~~~~~~~i~lv 213 (395)
T PLN02652 136 RGILIIIHGLNEHSG-RYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFL-EKIRSENPGVPCFLF 213 (395)
T ss_pred ceEEEEECCchHHHH-HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHH-HHHHHhCCCCCEEEE
Confidence 357999999988653 456778888889999999998732110000110 1122223333333 233322 4589999
Q ss_pred EecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhhhhhhH---Hhhccccccccccccccccchhhhh
Q 040744 240 TFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWASGFSA---AFLKKNSVATKGIVYTNELETDELV 316 (440)
Q Consensus 240 ~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~gfsa---a~l~~~s~~~~~~~~~~~~~l~~~v 316 (440)
|+||||.+++.. .. .++...+|+|+|+.|+.........+...+.. .+.++.... +... .+.
T Consensus 214 GhSmGG~ial~~----a~--~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~p~~~~~--~~~~---~~~---- 278 (395)
T PLN02652 214 GHSTGGAVVLKA----AS--YPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVAPRFQFK--GANK---RGI---- 278 (395)
T ss_pred EECHHHHHHHHH----Hh--ccCcccccceEEEECcccccccchHHHHHHHHHHHHhCCCCccc--Cccc---ccC----
Confidence 999999987421 11 22233579999998855432111111111100 000000000 0000 000
Q ss_pred ccccCCCCCchHHHHHHHH-H-HHHHHHHHhhhhhhhhhhhhhhhhcccCCCCCCEEEEEcCCCCccCHHHHHHHHHHHH
Q 040744 317 GSRASGEPKPAVTETALLV-V-LEKFFEVILHLPAVNRRLSDVLGLLSSGQPACPQLYIYSSADRVIPAESVESFIEEQR 394 (440)
Q Consensus 317 ~~~~~~~p~~~~~~~~ll~-~-l~~~f~~~~~~p~~~~rl~~~~~~l~~~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r 394 (440)
... ..+......... . ............ +.+......+.+ ....+|.|+|||++|.++|.+..+++++...
T Consensus 279 --~~s--~~~~~~~~~~~dp~~~~g~i~~~~~~~-~~~~~~~l~~~L--~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~ 351 (395)
T PLN02652 279 --PVS--RDPAALLAKYSDPLVYTGPIRVRTGHE-ILRISSYLTRNF--KSVTVPFMVLHGTADRVTDPLASQDLYNEAA 351 (395)
T ss_pred --CcC--CCHHHHHHHhcCCCcccCCchHHHHHH-HHHHHHHHHhhc--ccCCCCEEEEEeCCCCCCCHHHHHHHHHhcC
Confidence 000 000000000000 0 000000000000 000000111122 3457999999999999999999999988643
Q ss_pred HcCCceEEEEeCCCccccccccChHHHHHHHHHHHHHHHh
Q 040744 395 KAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDYVV 434 (440)
Q Consensus 395 ~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~~~ 434 (440)
. .+++.+.++++.|.-++-.+++++.+.+.+||+....
T Consensus 352 ~--~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 352 S--RHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred C--CCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 2 3567888999999998877899999999999997664
No 6
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.22 E-value=1.3e-09 Score=109.36 Aligned_cols=237 Identities=14% Similarity=0.160 Sum_probs=121.7
Q ss_pred CCeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCceeecc-cc--hhhhHHHHHHHHHHHHHhhhc----CCcE
Q 040744 164 SRTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQ-VG--GKAEQNIELLVNHLADCLEDE----GKNL 236 (440)
Q Consensus 164 ~~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~-~g--~k~~k~l~~l~~~i~~~l~~~----~~~I 236 (440)
.+.||++|||++....+...+++.+.+.||+|++++.|-... +.. .+ ...+..++++...+ +.+... ..++
T Consensus 59 ~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~-S~~~~~~~~~~~~~~~D~~~~i-~~l~~~~~~~~~~i 136 (330)
T PLN02298 59 RALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGR-SEGLRAYVPNVDLVVEDCLSFF-NSVKQREEFQGLPR 136 (330)
T ss_pred ceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCC-CCCccccCCCHHHHHHHHHHHH-HHHHhcccCCCCCE
Confidence 356999999986543344555666778899999999984211 111 11 01222234444333 233221 4589
Q ss_pred EEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChh--hhh-h---hhhHHhhcccccccccccccccc
Q 040744 237 VFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQ--VWA-S---GFSAAFLKKNSVATKGIVYTNEL 310 (440)
Q Consensus 237 l~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~--~~a-~---gfsaa~l~~~s~~~~~~~~~~~~ 310 (440)
++.|.||||.++.. +.... +++|+|+|+-+++....+.. .|. . .+-..+...... . ...
T Consensus 137 ~l~GhSmGG~ia~~-----~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~ 201 (330)
T PLN02298 137 FLYGESMGGAICLL-----IHLAN---PEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVARFLPTLAI-----V--PTA 201 (330)
T ss_pred EEEEecchhHHHHH-----HHhcC---cccceeEEEecccccCCcccCCchHHHHHHHHHHHHCCCCcc-----c--cCC
Confidence 99999999997742 11122 35799999998765432100 000 0 000000000000 0 000
Q ss_pred chhhhhccccCCCCCchHHHHHH-H--------HHHHHHHHHHhhhhhhhhhhhhhhhhcccCCCCCCEEEEEcCCCCcc
Q 040744 311 ETDELVGSRASGEPKPAVTETAL-L--------VVLEKFFEVILHLPAVNRRLSDVLGLLSSGQPACPQLYIYSSADRVI 381 (440)
Q Consensus 311 ~l~~~v~~~~~~~p~~~~~~~~l-l--------~~l~~~f~~~~~~p~~~~rl~~~~~~l~~~~~~~P~LYIYS~aD~lI 381 (440)
.. +. ... ......... . ..+..+.... . ... ...+.+ ....+|.|+|+|+.|.++
T Consensus 202 ~~---~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~---~~~~~l--~~i~~PvLii~G~~D~iv 265 (330)
T PLN02298 202 DL---LE-KSV---KVPAKKIIAKRNPMRYNGKPRLGTVVELL-R---VTD---YLGKKL--KDVSIPFIVLHGSADVVT 265 (330)
T ss_pred Cc---cc-ccc---cCHHHHHHHHhCccccCCCccHHHHHHHH-H---HHH---HHHHhh--hhcCCCEEEEecCCCCCC
Confidence 00 00 000 000000000 0 0000000000 0 000 011122 234689999999999999
Q ss_pred CHHHHHHHHHHHHHcCCceEEEEeCCCcccccccc---ChHHHHHHHHHHHHHHHhh
Q 040744 382 PAESVESFIEEQRKAGREVRACNFVSTPHVDHFRN---DPKLYTTQLSQFLEDYVVT 435 (440)
Q Consensus 382 P~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~---~PeeY~~aV~~FL~~~~~~ 435 (440)
|.+..+++++..+.. +.+...|+++.|.-++-. ..+++.+.+.+||.+.+..
T Consensus 266 p~~~~~~l~~~i~~~--~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~ 320 (330)
T PLN02298 266 DPDVSRALYEEAKSE--DKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTG 320 (330)
T ss_pred CHHHHHHHHHHhccC--CceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccC
Confidence 999999998765433 467888999988765532 2356778888888877644
No 7
>PHA02857 monoglyceride lipase; Provisional
Probab=99.21 E-value=3.4e-09 Score=102.95 Aligned_cols=236 Identities=14% Similarity=0.081 Sum_probs=124.0
Q ss_pred CeEEE-EeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCceeeccc-c--hhhhHHHHHHHHHHHHHhhhc-CCcEEEE
Q 040744 165 RTVVV-LLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQV-G--GKAEQNIELLVNHLADCLEDE-GKNLVFH 239 (440)
Q Consensus 165 ~plVV-LlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~-g--~k~~k~l~~l~~~i~~~l~~~-~~~Il~H 239 (440)
+++|+ +|||.+.. +.....++.+.+.||.|+.++.|-..- +... + ......++++++.+....+.. ..++++.
T Consensus 25 ~~~v~llHG~~~~~-~~~~~~~~~l~~~g~~via~D~~G~G~-S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lv 102 (276)
T PHA02857 25 KALVFISHGAGEHS-GRYEELAENISSLGILVFSHDHIGHGR-SNGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLL 102 (276)
T ss_pred CEEEEEeCCCcccc-chHHHHHHHHHhCCCEEEEccCCCCCC-CCCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEE
Confidence 35555 59998754 566778888989999999999883211 1000 0 112233455555553221112 4689999
Q ss_pred EecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhhhhhhHHhhc---cccccccccccccccchhhhh
Q 040744 240 TFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWASGFSAAFLK---KNSVATKGIVYTNELETDELV 316 (440)
Q Consensus 240 ~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~gfsaa~l~---~~s~~~~~~~~~~~~~l~~~v 316 (440)
|+||||.++.. +.... +++|+|+|+-|++.... ...+...+...... ......+..............
T Consensus 103 G~S~GG~ia~~-----~a~~~---p~~i~~lil~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (276)
T PHA02857 103 GHSMGATISIL-----AAYKN---PNLFTAMILMSPLVNAE-AVPRLNLLAAKLMGIFYPNKIVGKLCPESVSRDMDEVY 173 (276)
T ss_pred EcCchHHHHHH-----HHHhC---ccccceEEEeccccccc-cccHHHHHHHHHHHHhCCCCccCCCCHhhccCCHHHHH
Confidence 99999997632 11112 35799999999765421 11011000000000 000000000000000000000
Q ss_pred ccccCCCCCc---hHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcccCCCCCCEEEEEcCCCCccCHHHHHHHHHHH
Q 040744 317 GSRASGEPKP---AVTETALLVVLEKFFEVILHLPAVNRRLSDVLGLLSSGQPACPQLYIYSSADRVIPAESVESFIEEQ 393 (440)
Q Consensus 317 ~~~~~~~p~~---~~~~~~ll~~l~~~f~~~~~~p~~~~rl~~~~~~l~~~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~ 393 (440)
.. ...|.. .... .+... +.....+..+.+ .+.++|.|+|+|+.|.++|.+..+++++..
T Consensus 174 ~~--~~~~~~~~~~~~~--------~~~~~------~~~~~~~~~~~l--~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~ 235 (276)
T PHA02857 174 KY--QYDPLVNHEKIKA--------GFASQ------VLKATNKVRKII--PKIKTPILILQGTNNEISDVSGAYYFMQHA 235 (276)
T ss_pred HH--hcCCCccCCCccH--------HHHHH------HHHHHHHHHHhc--ccCCCCEEEEecCCCCcCChHHHHHHHHHc
Confidence 00 000000 0000 00000 000001111222 345799999999999999999999998754
Q ss_pred HHcCCceEEEEeCCCccccccccC--hHHHHHHHHHHHHHH
Q 040744 394 RKAGREVRACNFVSTPHVDHFRND--PKLYTTQLSQFLEDY 432 (440)
Q Consensus 394 r~~G~~V~~~~F~~S~HV~H~R~~--PeeY~~aV~~FL~~~ 432 (440)
+. +++...++++.|.-|.-.. .++.++.+.+|+++.
T Consensus 236 ~~---~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 236 NC---NREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred cC---CceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 32 4778889999999997644 677888888998874
No 8
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.21 E-value=6e-10 Score=104.84 Aligned_cols=197 Identities=17% Similarity=0.207 Sum_probs=119.8
Q ss_pred HHHHHHHHCCCeEEEEecCCCceeec-----ccchhhhHHHHHHHHHHHHHhhh---cCCcEEEEEecccHHHHHHHHHH
Q 040744 183 KYAEWYTSKGFHVITFTFPMAEILSY-----QVGGKAEQNIELLVNHLADCLED---EGKNLVFHTFSNTGWLTYGAILE 254 (440)
Q Consensus 183 KYa~iY~~~G~nVL~~~~p~~~il~~-----~~g~k~~k~l~~l~~~i~~~l~~---~~~~Il~H~FSnGG~~~~~~Ll~ 254 (440)
....++.++||.|+++.++-+.-.+. ..+......++++++.+....+. ++++|.+.|+|+||.+++..+
T Consensus 5 ~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~-- 82 (213)
T PF00326_consen 5 WNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA-- 82 (213)
T ss_dssp HHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH--
T ss_pred HHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh--
Confidence 45778889999999999986432211 11111233456666555333233 278999999999999875322
Q ss_pred HHhhcCCCCccCceEEEecCCCCCCCChhhhhhh--hhHHhhccccccccccccccccchhhhhccccCCCCCchHHHHH
Q 040744 255 KFQNKDPSLMGRIRGCIVDSAPVASPDPQVWASG--FSAAFLKKNSVATKGIVYTNELETDELVGSRASGEPKPAVTETA 332 (440)
Q Consensus 255 ~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~g--fsaa~l~~~s~~~~~~~~~~~~~l~~~v~~~~~~~p~~~~~~~~ 332 (440)
.+. ++.+++.|..+++.+.... +... +... ..... +.+....
T Consensus 83 -~~~-----~~~f~a~v~~~g~~d~~~~--~~~~~~~~~~---------------------~~~~~-----~~~~~~~-- 126 (213)
T PF00326_consen 83 -TQH-----PDRFKAAVAGAGVSDLFSY--YGTTDIYTKA---------------------EYLEY-----GDPWDNP-- 126 (213)
T ss_dssp -HHT-----CCGSSEEEEESE-SSTTCS--BHHTCCHHHG---------------------HHHHH-----SSTTTSH--
T ss_pred -ccc-----ceeeeeeeccceecchhcc--cccccccccc---------------------ccccc-----Cccchhh--
Confidence 221 3567899999977764211 0000 0000 00000 0000000
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhcccCCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCcccc
Q 040744 333 LLVVLEKFFEVILHLPAVNRRLSDVLGLLSSGQPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVD 412 (440)
Q Consensus 333 ll~~l~~~f~~~~~~p~~~~rl~~~~~~l~~~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~ 412 (440)
...+..... ..+.+....+|.|++||++|+.||.+..++++++.++.|.+++...|++..|.-
T Consensus 127 ----------------~~~~~~s~~-~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~ 189 (213)
T PF00326_consen 127 ----------------EFYRELSPI-SPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGF 189 (213)
T ss_dssp ----------------HHHHHHHHG-GGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSST
T ss_pred ----------------hhhhhhccc-cccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCC
Confidence 000000111 111111145799999999999999999999999999999999999999999966
Q ss_pred ccccChHHHHHHHHHHHHHHHh
Q 040744 413 HFRNDPKLYTTQLSQFLEDYVV 434 (440)
Q Consensus 413 H~R~~PeeY~~aV~~FL~~~~~ 434 (440)
-...+..++.+.+.+|+++.+.
T Consensus 190 ~~~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 190 GNPENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCchhHHHHHHHHHHHHHHHcC
Confidence 5566778899999999998875
No 9
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.20 E-value=8.5e-10 Score=103.36 Aligned_cols=61 Identities=18% Similarity=0.262 Sum_probs=51.2
Q ss_pred CCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHH
Q 040744 365 QPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLE 430 (440)
Q Consensus 365 ~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~ 430 (440)
..++|.|+++|+.|.++|.+..+++++... .++...++++.|.-+ ..+|+++.+.|.+|++
T Consensus 196 ~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 196 RIQHPVLLIANRDDMLVPYTQSLRLAAALP----NAQLKLLPYGGHASN-VTDPETFNRALLDFLK 256 (257)
T ss_pred ccCccEEEEecCcCcccCHHHHHHHHHhcC----CceEEEECCCCCCcc-ccCHHHHHHHHHHHhc
Confidence 356899999999999999999988876432 356778899999965 4799999999999986
No 10
>PRK10566 esterase; Provisional
Probab=99.19 E-value=4.1e-09 Score=100.83 Aligned_cols=61 Identities=20% Similarity=0.158 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCc--eEEEEeCCCccccccccChHHHHHHHHHHHHHH
Q 040744 367 ACPQLYIYSSADRVIPAESVESFIEEQRKAGRE--VRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDY 432 (440)
Q Consensus 367 ~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~--V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~ 432 (440)
.+|.|+|||++|++||+++.+++.+..+++|.+ ++.+.++++.|.- .+ +..+++.+||+++
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~----~~-~~~~~~~~fl~~~ 248 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRI----TP-EALDAGVAFFRQH 248 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCcc----CH-HHHHHHHHHHHhh
Confidence 579999999999999999999999988888864 7777889999963 34 4568899999864
No 11
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.16 E-value=2.9e-09 Score=111.52 Aligned_cols=236 Identities=15% Similarity=0.170 Sum_probs=124.9
Q ss_pred eeecCCCCccccCCCCC-cCC-CCCCeEEEEeeecCCc-hhhHHHHHHHHHHCCCeEEEEecCCCceeecccchhhhHHH
Q 040744 142 RWHLPETDAIDVSGTSD-CLA-MKSRTVVVLLGWLGAK-QKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNI 218 (440)
Q Consensus 142 ~~~~p~~~~~~~~~~~~-~~~-~~~~plVVLlGW~GA~-~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l 218 (440)
+++||-.++.. +.|+. .|. ++..|+||+||+.++. ......+++.+.++||+|++++.|-... +... ....+.
T Consensus 170 ~v~i~~~~g~~-l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~-s~~~--~~~~d~ 245 (414)
T PRK05077 170 ELEFPIPGGGP-ITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGF-SSKW--KLTQDS 245 (414)
T ss_pred EEEEEcCCCcE-EEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCC-CCCC--CccccH
Confidence 77777655422 22222 221 2446777777766654 3456667888899999999999984211 1111 000111
Q ss_pred HHHHHHHHHHhhh----cCCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCCh-hhhhhhhhHHh
Q 040744 219 ELLVNHLADCLED----EGKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDP-QVWASGFSAAF 293 (440)
Q Consensus 219 ~~l~~~i~~~l~~----~~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~-~~~a~gfsaa~ 293 (440)
..+...+.+++.. +..+|.+.|+|+||..++.. +... +++|+++|..+++...... ..+...+...+
T Consensus 246 ~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~---A~~~-----p~ri~a~V~~~~~~~~~~~~~~~~~~~p~~~ 317 (414)
T PRK05077 246 SLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRL---AYLE-----PPRLKAVACLGPVVHTLLTDPKRQQQVPEMY 317 (414)
T ss_pred HHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHH---HHhC-----CcCceEEEEECCccchhhcchhhhhhchHHH
Confidence 1222233344433 35799999999999987421 1111 2589999999987642100 00000000000
Q ss_pred hccccccccccccccccchhhhhccccCCCCCchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcccCCCCCCEEEE
Q 040744 294 LKKNSVATKGIVYTNELETDELVGSRASGEPKPAVTETALLVVLEKFFEVILHLPAVNRRLSDVLGLLSSGQPACPQLYI 373 (440)
Q Consensus 294 l~~~s~~~~~~~~~~~~~l~~~v~~~~~~~p~~~~~~~~ll~~l~~~f~~~~~~p~~~~rl~~~~~~l~~~~~~~P~LYI 373 (440)
.. .+...++.. . ..... +...+..+ . + .....+ ....++|.|+|
T Consensus 318 ~~---------------~la~~lg~~-----~--~~~~~----l~~~l~~~-s---l-----~~~~~l-~~~i~~PvLiI 361 (414)
T PRK05077 318 LD---------------VLASRLGMH-----D--ASDEA----LRVELNRY-S---L-----KVQGLL-GRRCPTPMLSG 361 (414)
T ss_pred HH---------------HHHHHhCCC-----C--CChHH----HHHHhhhc-c---c-----hhhhhh-ccCCCCcEEEE
Confidence 00 000000000 0 00000 00000000 0 0 000111 13467899999
Q ss_pred EcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHHHH
Q 040744 374 YSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDYV 433 (440)
Q Consensus 374 YS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~~ 433 (440)
+|+.|+++|.++.+.+.+... +.+.+.+++++|. ..+++..+.+.+||++.+
T Consensus 362 ~G~~D~ivP~~~a~~l~~~~~----~~~l~~i~~~~~~----e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 362 YWKNDPFSPEEDSRLIASSSA----DGKLLEIPFKPVY----RNFDKALQEISDWLEDRL 413 (414)
T ss_pred ecCCCCCCCHHHHHHHHHhCC----CCeEEEccCCCcc----CCHHHHHHHHHHHHHHHh
Confidence 999999999999997765431 3457778887444 488999999999998753
No 12
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.16 E-value=1.8e-09 Score=99.93 Aligned_cols=237 Identities=17% Similarity=0.216 Sum_probs=118.4
Q ss_pred CCCeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhc-CCcEEEEEe
Q 040744 163 KSRTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDE-GKNLVFHTF 241 (440)
Q Consensus 163 ~~~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~-~~~Il~H~F 241 (440)
+.+++|++|||+++. ....+.++.. ..||+|++++.|-... +..... ....+++.+.+.++++.- ..++.+-|+
T Consensus 12 ~~~~li~~hg~~~~~-~~~~~~~~~l-~~~~~v~~~d~~G~G~-s~~~~~--~~~~~~~~~~~~~~i~~~~~~~v~liG~ 86 (251)
T TIGR02427 12 GAPVLVFINSLGTDL-RMWDPVLPAL-TPDFRVLRYDKRGHGL-SDAPEG--PYSIEDLADDVLALLDHLGIERAVFCGL 86 (251)
T ss_pred CCCeEEEEcCcccch-hhHHHHHHHh-hcccEEEEecCCCCCC-CCCCCC--CCCHHHHHHHHHHHHHHhCCCceEEEEe
Confidence 346789999998765 3445555544 4699999999874211 100100 111233444444444432 568999999
Q ss_pred cccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhhhhhhHHhhccccccccccccccccchhhhhccccC
Q 040744 242 SNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWASGFSAAFLKKNSVATKGIVYTNELETDELVGSRAS 321 (440)
Q Consensus 242 SnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~gfsaa~l~~~s~~~~~~~~~~~~~l~~~v~~~~~ 321 (440)
|+||.+++... ... +++|+++|+-+++........|...+. .+.... ........+..+.. ..+
T Consensus 87 S~Gg~~a~~~a-----~~~---p~~v~~li~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~-~~~ 150 (251)
T TIGR02427 87 SLGGLIAQGLA-----ARR---PDRVRALVLSNTAAKIGTPESWNARIA--AVRAEG-----LAALADAVLERWFT-PGF 150 (251)
T ss_pred CchHHHHHHHH-----HHC---HHHhHHHhhccCccccCchhhHHHHHh--hhhhcc-----HHHHHHHHHHHHcc-ccc
Confidence 99999764222 111 256888887775543221112211110 000000 00000000000000 000
Q ss_pred CCCCchHHHHHHHHHHHH--HHHHHhhhhhhhhhhhhhhhhcccCCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCc
Q 040744 322 GEPKPAVTETALLVVLEK--FFEVILHLPAVNRRLSDVLGLLSSGQPACPQLYIYSSADRVIPAESVESFIEEQRKAGRE 399 (440)
Q Consensus 322 ~~p~~~~~~~~ll~~l~~--~f~~~~~~p~~~~rl~~~~~~l~~~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~ 399 (440)
..+.+.... .....+.. ..........+.. .+..+.+ .+.++|.|+|+|+.|.++|.+.++++.+... .
T Consensus 151 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~----~ 221 (251)
T TIGR02427 151 REAHPARLD-LYRNMLVRQPPDGYAGCCAAIRD--ADFRDRL--GAIAVPTLCIAGDQDGSTPPELVREIADLVP----G 221 (251)
T ss_pred ccCChHHHH-HHHHHHHhcCHHHHHHHHHHHhc--ccHHHHh--hhcCCCeEEEEeccCCcCChHHHHHHHHhCC----C
Confidence 000000000 00000000 0000000000000 0111222 2356899999999999999998888766432 2
Q ss_pred eEEEEeCCCccccccccChHHHHHHHHHHHH
Q 040744 400 VRACNFVSTPHVDHFRNDPKLYTTQLSQFLE 430 (440)
Q Consensus 400 V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~ 430 (440)
.+...++++.|..++ .+|+++.+.+.+|++
T Consensus 222 ~~~~~~~~~gH~~~~-~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 222 ARFAEIRGAGHIPCV-EQPEAFNAALRDFLR 251 (251)
T ss_pred ceEEEECCCCCcccc-cChHHHHHHHHHHhC
Confidence 567888999999887 789999999999974
No 13
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.15 E-value=5.3e-09 Score=106.11 Aligned_cols=65 Identities=14% Similarity=0.227 Sum_probs=49.6
Q ss_pred CCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHH----HHHHHHHHHHHH
Q 040744 365 QPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKL----YTTQLSQFLEDY 432 (440)
Q Consensus 365 ~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~Pee----Y~~aV~~FL~~~ 432 (440)
...+|.|+|+|+.|.++|.+..+++++..... +++.+.++++.|.- +..+|++ ..+.+.+||++.
T Consensus 277 ~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~--~~~l~~i~~~gH~l-~~e~p~~~~~~v~~~i~~wL~~~ 345 (349)
T PLN02385 277 EVSLPLLILHGEADKVTDPSVSKFLYEKASSS--DKKLKLYEDAYHSI-LEGEPDEMIFQVLDDIISWLDSH 345 (349)
T ss_pred cCCCCEEEEEeCCCCccChHHHHHHHHHcCCC--CceEEEeCCCeeec-ccCCChhhHHHHHHHHHHHHHHh
Confidence 35789999999999999999999998765322 46788899999975 4467776 445566666654
No 14
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.14 E-value=1.9e-09 Score=99.59 Aligned_cols=60 Identities=18% Similarity=0.297 Sum_probs=50.7
Q ss_pred CCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHH
Q 040744 365 QPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFL 429 (440)
Q Consensus 365 ~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL 429 (440)
+.++|.|+|+|+.|.++|.+..+++.+.. ..++...+++++|..++ .+|+++.+.|.+|+
T Consensus 186 ~i~~Pvlii~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fi 245 (245)
T TIGR01738 186 NISVPFLRLYGYLDGLVPAKVVPYLDKLA----PHSELYIFAKAAHAPFL-SHAEAFCALLVAFK 245 (245)
T ss_pred cCCCCEEEEeecCCcccCHHHHHHHHHhC----CCCeEEEeCCCCCCccc-cCHHHHHHHHHhhC
Confidence 45799999999999999998888776532 24678889999999888 68999999999985
No 15
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.13 E-value=2.5e-09 Score=93.08 Aligned_cols=145 Identities=18% Similarity=0.316 Sum_probs=101.1
Q ss_pred eEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhcCCcEEEEEecccH
Q 040744 166 TVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDEGKNLVFHTFSNTG 245 (440)
Q Consensus 166 plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~~~~Il~H~FSnGG 245 (440)
+||++|||.+.+ +.+..+++.+.+.||.|+.++.|..... .....++.+++.+..- ..+..+|++-|+|+||
T Consensus 1 ~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~i~l~G~S~Gg 72 (145)
T PF12695_consen 1 VVVLLHGWGGSR-RDYQPLAEALAEQGYAVVAFDYPGHGDS------DGADAVERVLADIRAG-YPDPDRIILIGHSMGG 72 (145)
T ss_dssp EEEEECTTTTTT-HHHHHHHHHHHHTTEEEEEESCTTSTTS------HHSHHHHHHHHHHHHH-HCTCCEEEEEEETHHH
T ss_pred CEEEECCCCCCH-HHHHHHHHHHHHCCCEEEEEecCCCCcc------chhHHHHHHHHHHHhh-cCCCCcEEEEEEccCc
Confidence 589999999976 4578999999999999999998753211 1112334455444211 1247899999999999
Q ss_pred HHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhhhhhhHHhhccccccccccccccccchhhhhccccCCCCC
Q 040744 246 WLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWASGFSAAFLKKNSVATKGIVYTNELETDELVGSRASGEPK 325 (440)
Q Consensus 246 ~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~gfsaa~l~~~s~~~~~~~~~~~~~l~~~v~~~~~~~p~ 325 (440)
.++..... +. ++|+++|+-+++.. .. .
T Consensus 73 ~~a~~~~~----~~-----~~v~~~v~~~~~~~---~~--------~--------------------------------- 99 (145)
T PF12695_consen 73 AIAANLAA----RN-----PRVKAVVLLSPYPD---SE--------D--------------------------------- 99 (145)
T ss_dssp HHHHHHHH----HS-----TTESEEEEESESSG---CH--------H---------------------------------
T ss_pred HHHHHHhh----hc-----cceeEEEEecCccc---hh--------h---------------------------------
Confidence 98753332 11 47889998886310 00 0
Q ss_pred chHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcccCCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEe
Q 040744 326 PAVTETALLVVLEKFFEVILHLPAVNRRLSDVLGLLSSGQPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNF 405 (440)
Q Consensus 326 ~~~~~~~ll~~l~~~f~~~~~~p~~~~rl~~~~~~l~~~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F 405 (440)
+ ...+.|.|+++|+.|.++|.+.++++++..+ .+++.+.+
T Consensus 100 ------------------------~-------------~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~i 139 (145)
T PF12695_consen 100 ------------------------L-------------AKIRIPVLFIHGENDPLVPPEQVRRLYEALP---GPKELYII 139 (145)
T ss_dssp ------------------------H-------------TTTTSEEEEEEETT-SSSHHHHHHHHHHHHC---SSEEEEEE
T ss_pred ------------------------h-------------hccCCcEEEEEECCCCcCCHHHHHHHHHHcC---CCcEEEEe
Confidence 0 0122489999999999999999999998765 45789999
Q ss_pred CCCccc
Q 040744 406 VSTPHV 411 (440)
Q Consensus 406 ~~S~HV 411 (440)
+++.|.
T Consensus 140 ~g~~H~ 145 (145)
T PF12695_consen 140 PGAGHF 145 (145)
T ss_dssp TTS-TT
T ss_pred CCCcCc
Confidence 999994
No 16
>PRK10749 lysophospholipase L2; Provisional
Probab=99.12 E-value=2.1e-08 Score=101.23 Aligned_cols=68 Identities=19% Similarity=0.312 Sum_probs=55.7
Q ss_pred CCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcC---CceEEEEeCCCccccccccC--hHHHHHHHHHHHHH
Q 040744 364 GQPACPQLYIYSSADRVIPAESVESFIEEQRKAG---REVRACNFVSTPHVDHFRND--PKLYTTQLSQFLED 431 (440)
Q Consensus 364 ~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G---~~V~~~~F~~S~HV~H~R~~--PeeY~~aV~~FL~~ 431 (440)
...+.|.|+|+|+.|++++.+..+++++..++.| .+++.+.|+++.|.-+.-.+ .++.++.+.+|+++
T Consensus 256 ~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 256 GDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred cCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhh
Confidence 3457899999999999999999999988766554 24578999999999887554 67788888888875
No 17
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.12 E-value=1.2e-08 Score=96.69 Aligned_cols=105 Identities=20% Similarity=0.165 Sum_probs=64.4
Q ss_pred CCeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCceeecccchhh-hHHHHHHHHHHHHHhhhc-CCcEEEEEe
Q 040744 164 SRTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGGKA-EQNIELLVNHLADCLEDE-GKNLVFHTF 241 (440)
Q Consensus 164 ~~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~-~k~l~~l~~~i~~~l~~~-~~~Il~H~F 241 (440)
.++||++|||.|+......-+.+...+.||+|+.++.|-... +....... ...++.+.+.+.++++.- ..++++-|+
T Consensus 25 ~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~liG~ 103 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGY-SDQPDDSDELWTIDYFVDELEEVREKLGLDKFYLLGH 103 (288)
T ss_pred CCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCC-CCCCCcccccccHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 478999999988775555556666677799999999874211 11110000 011234444444444333 456999999
Q ss_pred cccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCC
Q 040744 242 SNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPV 277 (440)
Q Consensus 242 SnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg 277 (440)
||||.++.... . .. +++|+++|+.++..
T Consensus 104 S~Gg~ia~~~a----~-~~---p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 104 SWGGMLAQEYA----L-KY---GQHLKGLIISSMLD 131 (288)
T ss_pred ehHHHHHHHHH----H-hC---ccccceeeEecccc
Confidence 99999874322 1 11 35788999887554
No 18
>PLN02511 hydrolase
Probab=99.10 E-value=1.8e-09 Score=111.93 Aligned_cols=68 Identities=21% Similarity=0.192 Sum_probs=50.1
Q ss_pred CCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHH------HHHHHHHHHHHHHhh
Q 040744 364 GQPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKL------YTTQLSQFLEDYVVT 435 (440)
Q Consensus 364 ~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~Pee------Y~~aV~~FL~~~~~~ 435 (440)
...++|.|+|+|++|+++|.+...... + +....++...+++++|+.++-. |+. +.+.+.+|++.+...
T Consensus 295 ~~I~vPtLiI~g~dDpi~p~~~~~~~~--~-~~~p~~~l~~~~~gGH~~~~E~-p~~~~~~~w~~~~i~~Fl~~~~~~ 368 (388)
T PLN02511 295 KHVRVPLLCIQAANDPIAPARGIPRED--I-KANPNCLLIVTPSGGHLGWVAG-PEAPFGAPWTDPVVMEFLEALEEG 368 (388)
T ss_pred ccCCCCeEEEEcCCCCcCCcccCcHhH--H-hcCCCEEEEECCCcceeccccC-CCCCCCCccHHHHHHHHHHHHHHh
Confidence 346789999999999999987663211 1 1223577888999999998854 544 478899999877643
No 19
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.07 E-value=9.8e-09 Score=93.09 Aligned_cols=224 Identities=19% Similarity=0.208 Sum_probs=112.9
Q ss_pred EEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhc-CCcEEEEEecccH
Q 040744 167 VVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDE-GKNLVFHTFSNTG 245 (440)
Q Consensus 167 lVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~-~~~Il~H~FSnGG 245 (440)
||++|||++.. ....+.++.+ .+||+|++++.|-...-..... ......+..++.+.++++.- .+++++-|+|+||
T Consensus 1 vv~~hG~~~~~-~~~~~~~~~l-~~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg 77 (228)
T PF12697_consen 1 VVFLHGFGGSS-ESWDPLAEAL-ARGYRVIAFDLPGHGRSDPPPD-YSPYSIEDYAEDLAELLDALGIKKVILVGHSMGG 77 (228)
T ss_dssp EEEE-STTTTG-GGGHHHHHHH-HTTSEEEEEECTTSTTSSSHSS-GSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHH
T ss_pred eEEECCCCCCH-HHHHHHHHHH-hCCCEEEEEecCCccccccccc-cCCcchhhhhhhhhhccccccccccccccccccc
Confidence 79999999977 5677777777 4899999999984211000000 00111233344444444443 4799999999999
Q ss_pred HHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhh-hhhhHHhhccccccccccccccccchh-hhhccccCCC
Q 040744 246 WLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWA-SGFSAAFLKKNSVATKGIVYTNELETD-ELVGSRASGE 323 (440)
Q Consensus 246 ~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a-~gfsaa~l~~~s~~~~~~~~~~~~~l~-~~v~~~~~~~ 323 (440)
..++... .. .+++|+++|+-+++.... ... ..+...++.+.. ..... ....+. .... ..+
T Consensus 78 ~~a~~~a----~~----~p~~v~~~vl~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~-~~~-- 139 (228)
T PF12697_consen 78 MIALRLA----AR----YPDRVKGLVLLSPPPPLP---DSPSRSFGPSFIRRLL---AWRSR-SLRRLASRFFY-RWF-- 139 (228)
T ss_dssp HHHHHHH----HH----SGGGEEEEEEESESSSHH---HHHCHHHHHHHHHHHH---HHHHH-HHHHHHHHHHH-HHH--
T ss_pred ccccccc----cc----cccccccceeeccccccc---ccccccccchhhhhhh---hcccc-ccccccccccc-ccc--
Confidence 9764322 11 135899999999777521 000 000001111000 00000 000000 0000 000
Q ss_pred CCchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcccCCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEE
Q 040744 324 PKPAVTETALLVVLEKFFEVILHLPAVNRRLSDVLGLLSSGQPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRAC 403 (440)
Q Consensus 324 p~~~~~~~~ll~~l~~~f~~~~~~p~~~~rl~~~~~~l~~~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~ 403 (440)
........+-.....+....... ....+..+.+ ...++|.++|+|+.|.++|.+.++++.+.. ..++..
T Consensus 140 -~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~----~~~~~~ 208 (228)
T PF12697_consen 140 -DGDEPEDLIRSSRRALAEYLRSN----LWQADLSEAL--PRIKVPVLVIHGEDDPIVPPESAEELADKL----PNAELV 208 (228)
T ss_dssp -THHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHH--HGSSSEEEEEEETTSSSSHHHHHHHHHHHS----TTEEEE
T ss_pred -ccccccccccccccccccccccc----cccccccccc--cccCCCeEEeecCCCCCCCHHHHHHHHHHC----CCCEEE
Confidence 00000000000000000000000 0011222223 223689999999999999987877777543 247889
Q ss_pred EeCCCccccccccChHHHHH
Q 040744 404 NFVSTPHVDHFRNDPKLYTT 423 (440)
Q Consensus 404 ~F~~S~HV~H~R~~PeeY~~ 423 (440)
.++++.|..++. +|++..+
T Consensus 209 ~~~~~gH~~~~~-~p~~~~~ 227 (228)
T PF12697_consen 209 VIPGAGHFLFLE-QPDEVAE 227 (228)
T ss_dssp EETTSSSTHHHH-SHHHHHH
T ss_pred EECCCCCccHHH-CHHHHhc
Confidence 999999998774 8887654
No 20
>PRK10985 putative hydrolase; Provisional
Probab=99.05 E-value=7.4e-08 Score=97.06 Aligned_cols=106 Identities=13% Similarity=0.137 Sum_probs=65.1
Q ss_pred CCCeEEEEeeecCCch-hhHHHHHHHHHHCCCeEEEEecCCC-ceee-----cccchhhhHHHHHHHHHHHHHhhhcCCc
Q 040744 163 KSRTVVVLLGWLGAKQ-KHLRKYAEWYTSKGFHVITFTFPMA-EILS-----YQVGGKAEQNIELLVNHLADCLEDEGKN 235 (440)
Q Consensus 163 ~~~plVVLlGW~GA~~-khl~KYa~iY~~~G~nVL~~~~p~~-~il~-----~~~g~k~~k~l~~l~~~i~~~l~~~~~~ 235 (440)
..++||++|||.|+.. .++.+.++.+.++||+|++++++-. ..-. +..+ ...++..+++++.+. ....+
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~--~~~D~~~~i~~l~~~--~~~~~ 132 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSG--ETEDARFFLRWLQRE--FGHVP 132 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCC--chHHHHHHHHHHHHh--CCCCC
Confidence 4578999999998643 3566778889999999999998741 1100 0111 112233333333221 12568
Q ss_pred EEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCC
Q 040744 236 LVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVA 278 (440)
Q Consensus 236 Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~ 278 (440)
+++.|+||||.++...+.+ ..+ ..+|+++|.=|+|..
T Consensus 133 ~~~vG~S~GG~i~~~~~~~----~~~--~~~~~~~v~i~~p~~ 169 (324)
T PRK10985 133 TAAVGYSLGGNMLACLLAK----EGD--DLPLDAAVIVSAPLM 169 (324)
T ss_pred EEEEEecchHHHHHHHHHh----hCC--CCCccEEEEEcCCCC
Confidence 9999999999976443322 111 124777777777765
No 21
>PRK11460 putative hydrolase; Provisional
Probab=99.04 E-value=3.2e-08 Score=95.45 Aligned_cols=64 Identities=17% Similarity=-0.017 Sum_probs=55.0
Q ss_pred CCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHHHHhh
Q 040744 367 ACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDYVVT 435 (440)
Q Consensus 367 ~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~~~~ 435 (440)
..|.|++||++|++||++..+++++..++.|.+++.+.+++..|.= ..+..+.+.+|+++.+..
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i-----~~~~~~~~~~~l~~~l~~ 211 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAI-----DPRLMQFALDRLRYTVPK 211 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCC-----CHHHHHHHHHHHHHHcch
Confidence 4699999999999999999999999999999999999999999974 346667888888877644
No 22
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.01 E-value=3.1e-08 Score=93.74 Aligned_cols=101 Identities=15% Similarity=0.095 Sum_probs=63.3
Q ss_pred CCeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhc-CCcEEEEEec
Q 040744 164 SRTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDE-GKNLVFHTFS 242 (440)
Q Consensus 164 ~~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~-~~~Il~H~FS 242 (440)
.++||++|||+++. ..-.+.+... .+|+|+.++.|-...-...... .++.+.+.+.+++++. .+++++-|+|
T Consensus 2 ~p~vvllHG~~~~~-~~w~~~~~~l--~~~~vi~~D~~G~G~S~~~~~~----~~~~~~~~l~~~l~~~~~~~~~lvG~S 74 (242)
T PRK11126 2 LPWLVFLHGLLGSG-QDWQPVGEAL--PDYPRLYIDLPGHGGSAAISVD----GFADVSRLLSQTLQSYNILPYWLVGYS 74 (242)
T ss_pred CCEEEEECCCCCCh-HHHHHHHHHc--CCCCEEEecCCCCCCCCCcccc----CHHHHHHHHHHHHHHcCCCCeEEEEEC
Confidence 36899999999977 3556666655 3799999998732110000111 2334445555555544 5799999999
Q ss_pred ccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCC
Q 040744 243 NTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVA 278 (440)
Q Consensus 243 nGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~ 278 (440)
|||.+++... . ..+ ...|+++|+.+++..
T Consensus 75 ~Gg~va~~~a----~-~~~--~~~v~~lvl~~~~~~ 103 (242)
T PRK11126 75 LGGRIAMYYA----C-QGL--AGGLCGLIVEGGNPG 103 (242)
T ss_pred HHHHHHHHHH----H-hCC--cccccEEEEeCCCCC
Confidence 9999874221 1 111 124899999886654
No 23
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.01 E-value=3.3e-08 Score=91.00 Aligned_cols=60 Identities=20% Similarity=0.318 Sum_probs=44.7
Q ss_pred CCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHH
Q 040744 365 QPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLE 430 (440)
Q Consensus 365 ~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~ 430 (440)
...+|.|+|+|+.|.+++ +..++ .++....++...++++.|.-++ .+|++..+.+.+|++
T Consensus 192 ~~~~P~l~i~g~~D~~~~-~~~~~----~~~~~~~~~~~~~~~~gH~~~~-e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 192 ALTIPVLYLCGEKDEKFV-QIAKE----MQKLLPNLTLVIIANAGHNIHL-ENPEAFAKILLAFLE 251 (251)
T ss_pred CCCCceEEEeeCcchHHH-HHHHH----HHhcCCCCcEEEEcCCCCCcCc-cChHHHHHHHHHHhC
Confidence 457899999999998763 33332 2333335677788999998887 579999999999973
No 24
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.01 E-value=1.7e-08 Score=101.83 Aligned_cols=231 Identities=18% Similarity=0.196 Sum_probs=117.7
Q ss_pred CCCeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhc-CCcEEEEEe
Q 040744 163 KSRTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDE-GKNLVFHTF 241 (440)
Q Consensus 163 ~~~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~-~~~Il~H~F 241 (440)
+.++||++|||.|+.. ......+.. ..+|+|+.++.|-...-.. .. ....++.+.+.+.++++.- ..++++.|+
T Consensus 130 ~~~~vl~~HG~~~~~~-~~~~~~~~l-~~~~~v~~~d~~g~G~s~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~lvG~ 204 (371)
T PRK14875 130 DGTPVVLIHGFGGDLN-NWLFNHAAL-AAGRPVIALDLPGHGASSK-AV--GAGSLDELAAAVLAFLDALGIERAHLVGH 204 (371)
T ss_pred CCCeEEEECCCCCccc-hHHHHHHHH-hcCCEEEEEcCCCCCCCCC-CC--CCCCHHHHHHHHHHHHHhcCCccEEEEee
Confidence 3579999999999764 333334433 3469999999884221100 00 1112344555555554443 468999999
Q ss_pred cccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChh-hhhhhhhHHhhccccccccccccccccchhhhhcccc
Q 040744 242 SNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQ-VWASGFSAAFLKKNSVATKGIVYTNELETDELVGSRA 320 (440)
Q Consensus 242 SnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~-~~a~gfsaa~l~~~s~~~~~~~~~~~~~l~~~v~~~~ 320 (440)
|+||.+++... .. . +.+|+++|+.++++..+... .|..++.....+. ... ..+........
T Consensus 205 S~Gg~~a~~~a----~~-~---~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~----~~~~~~~~~~~ 266 (371)
T PRK14875 205 SMGGAVALRLA----AR-A---PQRVASLTLIAPAGLGPEINGDYIDGFVAAESRR------ELK----PVLELLFADPA 266 (371)
T ss_pred chHHHHHHHHH----Hh-C---chheeEEEEECcCCcCcccchhHHHHhhcccchh------HHH----HHHHHHhcChh
Confidence 99999874221 11 1 25789999998765432110 1111111000000 000 00000000000
Q ss_pred CCCCCchHHHHHHH--------HHHHHHHHHHhhhhhhhhhhhhhhhhcccCCCCCCEEEEEcCCCCccCHHHHHHHHHH
Q 040744 321 SGEPKPAVTETALL--------VVLEKFFEVILHLPAVNRRLSDVLGLLSSGQPACPQLYIYSSADRVIPAESVESFIEE 392 (440)
Q Consensus 321 ~~~p~~~~~~~~ll--------~~l~~~f~~~~~~p~~~~rl~~~~~~l~~~~~~~P~LYIYS~aD~lIP~~dVE~~~e~ 392 (440)
. ........... ..+..+...... ..... .+....+ ...++|.|+|+|+.|.++|++..+++.+
T Consensus 267 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~l--~~i~~Pvlii~g~~D~~vp~~~~~~l~~- 338 (371)
T PRK14875 267 L--VTRQMVEDLLKYKRLDGVDDALRALADALFA--GGRQR-VDLRDRL--ASLAIPVLVIWGEQDRIIPAAHAQGLPD- 338 (371)
T ss_pred h--CCHHHHHHHHHHhccccHHHHHHHHHHHhcc--Ccccc-hhHHHHH--hcCCCCEEEEEECCCCccCHHHHhhccC-
Confidence 0 00000000000 000000000000 00000 1111122 2457999999999999999987665432
Q ss_pred HHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHH
Q 040744 393 QRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLED 431 (440)
Q Consensus 393 ~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~ 431 (440)
.++.+.++++.|.-++ .+|++..+.|.+|+++
T Consensus 339 ------~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 339 ------GVAVHVLPGAGHMPQM-EAAADVNRLLAEFLGK 370 (371)
T ss_pred ------CCeEEEeCCCCCChhh-hCHHHHHHHHHHHhcc
Confidence 3667889999997654 6899999999999875
No 25
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.99 E-value=1.8e-08 Score=98.23 Aligned_cols=65 Identities=12% Similarity=0.111 Sum_probs=52.3
Q ss_pred CCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHHHHhh
Q 040744 365 QPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDYVVT 435 (440)
Q Consensus 365 ~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~~~~ 435 (440)
...+|.|+|+|+.|+++|.+..+++.+... + .+...+++ .|.-+. .+|+++.+.+.+|+++....
T Consensus 205 ~i~~P~lii~G~~D~~v~~~~~~~l~~~~~--~--~~~~~i~~-gH~~~~-e~p~~~~~~i~~fl~~~~~~ 269 (276)
T TIGR02240 205 KIQQPTLVLAGDDDPIIPLINMRLLAWRIP--N--AELHIIDD-GHLFLI-TRAEAVAPIIMKFLAEERQR 269 (276)
T ss_pred cCCCCEEEEEeCCCCcCCHHHHHHHHHhCC--C--CEEEEEcC-CCchhh-ccHHHHHHHHHHHHHHhhhh
Confidence 456899999999999999999998886542 2 34555665 898776 79999999999999987643
No 26
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.97 E-value=3e-08 Score=94.18 Aligned_cols=61 Identities=28% Similarity=0.284 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHHH
Q 040744 367 ACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDY 432 (440)
Q Consensus 367 ~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~ 432 (440)
..|.+++||+.|++||.+..++..+..++.|.+|+...|++..|-- ..+..+.+.+||+++
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i-----~~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI-----SPEELRDLREFLEKH 215 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-------HHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC-----CHHHHHHHHHHHhhh
Confidence 5799999999999999999999999999999999999999999954 355668899999875
No 27
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=98.96 E-value=8.8e-08 Score=92.69 Aligned_cols=61 Identities=13% Similarity=0.216 Sum_probs=51.8
Q ss_pred CCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHH
Q 040744 365 QPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLE 430 (440)
Q Consensus 365 ~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~ 430 (440)
+..+|.|+|+|+.|.++|.+..+++.+... .++.+.+++++|.- ...+|++..+.+.+|++
T Consensus 221 ~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~----~~~~~~i~~agH~~-~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 221 EIKAKTLVTWGRDDRFVPLDHGLKLLWNMP----DAQLHVFSRCGHWA-QWEHADAFNRLVIDFLR 281 (282)
T ss_pred hCCCCEEEEEccCCCcCCchhHHHHHHhCC----CCEEEEeCCCCcCC-cccCHHHHHHHHHHHhh
Confidence 457899999999999999998888776542 36678899999995 66899999999999986
No 28
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.95 E-value=1.1e-07 Score=93.48 Aligned_cols=67 Identities=10% Similarity=0.261 Sum_probs=53.2
Q ss_pred CCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHHHHhh
Q 040744 365 QPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDYVVT 435 (440)
Q Consensus 365 ~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~~~~ 435 (440)
..++|.|+|+|+.|.+++.+..++.+...-. ..+.+.++++.|.-++ .+|++-.+++.+|++++...
T Consensus 226 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~---~~~~~~i~~~gH~~~~-e~p~~v~~~i~~fl~~~~~~ 292 (295)
T PRK03592 226 TSDVPKLLINAEPGAILTTGAIRDWCRSWPN---QLEITVFGAGLHFAQE-DSPEEIGAAIAAWLRRLRLA 292 (295)
T ss_pred cCCCCeEEEeccCCcccCcHHHHHHHHHhhh---hcceeeccCcchhhhh-cCHHHHHHHHHHHHHHhccc
Confidence 3578999999999999966666666543322 3567778999999996 68999999999999987654
No 29
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.93 E-value=9.9e-08 Score=93.77 Aligned_cols=62 Identities=16% Similarity=0.231 Sum_probs=50.7
Q ss_pred CCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHH
Q 040744 365 QPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLED 431 (440)
Q Consensus 365 ~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~ 431 (440)
+..+|.|+|+|+.|.++|.+..+.+.+. . ...+.+.+++++|.-|+ .+|++-.+.|.+|+++
T Consensus 232 ~i~~P~lvi~G~~D~~~~~~~~~~~~~~-~---~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 232 AVKCPVLIAWGEKDPWEPVELGRAYANF-D---AVEDFIVLPGVGHCPQD-EAPELVNPLIESFVAR 293 (294)
T ss_pred hcCCCeEEEEecCCCCCChHHHHHHHhc-C---CccceEEeCCCCCChhh-hCHHHHHHHHHHHHhc
Confidence 4578999999999999999888774332 1 12457788999999887 8899999999999975
No 30
>PLN02442 S-formylglutathione hydrolase
Probab=98.92 E-value=3.2e-07 Score=91.12 Aligned_cols=222 Identities=13% Similarity=0.143 Sum_probs=124.2
Q ss_pred CCCCCCCceeeecCCCCccccCCCCCcCCCCCCeEEEEeeecCCchhhH--HHHHHHHHHCCCeEEEEecCCCc------
Q 040744 133 PASYSDVLYRWHLPETDAIDVSGTSDCLAMKSRTVVVLLGWLGAKQKHL--RKYAEWYTSKGFHVITFTFPMAE------ 204 (440)
Q Consensus 133 p~~~~~~~y~~~~p~~~~~~~~~~~~~~~~~~~plVVLlGW~GA~~khl--~KYa~iY~~~G~nVL~~~~p~~~------ 204 (440)
|+...+..|.+-+|+. . ...+-|.|+++|||.|...... ....+.....|+.|++++.....
T Consensus 26 ~~l~~~~~~~vy~P~~-~---------~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~ 95 (283)
T PLN02442 26 STLGCSMTFSVYFPPA-S---------DSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGE 95 (283)
T ss_pred cccCCceEEEEEcCCc-c---------cCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCC
Confidence 4445666676666651 1 1134567888999999775432 33456667789999998754211
Q ss_pred --e--ee-----c------ccc-hhh-hHHHHHHHHHHHHHhhh-cCCcEEEEEecccHHHHHHHHHHHHhhcCCCCccC
Q 040744 205 --I--LS-----Y------QVG-GKA-EQNIELLVNHLADCLED-EGKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGR 266 (440)
Q Consensus 205 --i--l~-----~------~~g-~k~-~k~l~~l~~~i~~~l~~-~~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~ 266 (440)
. +. + .++ .+. ....+++.+++.+.++. +.+++++-|+||||..++... ++ . ++.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a---~~--~---p~~ 167 (283)
T PLN02442 96 ADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIY---LK--N---PDK 167 (283)
T ss_pred ccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHH---Hh--C---chh
Confidence 0 00 0 000 011 11223344444433322 367899999999999774322 22 1 356
Q ss_pred ceEEEecCCCCCCCChhhhhhhhhHHhhccccccccccccccccchhhhhccccCCCCCchHHHHHHHHHHHHHHHHHhh
Q 040744 267 IRGCIVDSAPVASPDPQVWASGFSAAFLKKNSVATKGIVYTNELETDELVGSRASGEPKPAVTETALLVVLEKFFEVILH 346 (440)
Q Consensus 267 VkG~I~DSaPg~~~~~~~~a~gfsaa~l~~~s~~~~~~~~~~~~~l~~~v~~~~~~~p~~~~~~~~ll~~l~~~f~~~~~ 346 (440)
+++++.-|+..++... .| + ...+. ...+. +. . ...+ +
T Consensus 168 ~~~~~~~~~~~~~~~~-~~--~--~~~~~------------------~~~g~-----~~----~-----~~~~------~ 204 (283)
T PLN02442 168 YKSVSAFAPIANPINC-PW--G--QKAFT------------------NYLGS-----DK----A-----DWEE------Y 204 (283)
T ss_pred EEEEEEECCccCcccC-ch--h--hHHHH------------------HHcCC-----Ch----h-----hHHH------c
Confidence 7888888866442100 01 0 00000 00000 00 0 0000 0
Q ss_pred hhhhhhhhhhhhhhcccCCCCCCEEEEEcCCCCccCHH-HHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHH
Q 040744 347 LPAVNRRLSDVLGLLSSGQPACPQLYIYSSADRVIPAE-SVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQL 425 (440)
Q Consensus 347 ~p~~~~rl~~~~~~l~~~~~~~P~LYIYS~aD~lIP~~-dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV 425 (440)
-| ....+. .....+|.|+++|+.|++++.. ..+++++..++.|.+++...+++..|. |..+
T Consensus 205 d~------~~~~~~--~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~----------~~~~ 266 (283)
T PLN02442 205 DA------TELVSK--FNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHS----------YFFI 266 (283)
T ss_pred Ch------hhhhhh--ccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCcc----------HHHH
Confidence 00 000111 1234679999999999999974 578899999999999999999999997 4477
Q ss_pred HHHHHHHH
Q 040744 426 SQFLEDYV 433 (440)
Q Consensus 426 ~~FL~~~~ 433 (440)
.+|+++++
T Consensus 267 ~~~i~~~~ 274 (283)
T PLN02442 267 ATFIDDHI 274 (283)
T ss_pred HHHHHHHH
Confidence 77776655
No 31
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=98.91 E-value=1.2e-08 Score=97.18 Aligned_cols=255 Identities=19% Similarity=0.232 Sum_probs=152.9
Q ss_pred hHHHHHHhHhhhccCCCCC-CCC--CCCCCCCCCce-eeecCCCCccccCCCCCcCC-CCCCeEEEEeeecCCchhhHHH
Q 040744 109 LLVNVYQSAELAKASKPTK-TTG--SIPASYSDVLY-RWHLPETDAIDVSGTSDCLA-MKSRTVVVLLGWLGAKQKHLRK 183 (440)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~-~~~--~~p~~~~~~~y-~~~~p~~~~~~~~~~~~~~~-~~~~plVVLlGW~GA~~khl~K 183 (440)
.+..+|.+.+..-.++-.+ .-. -+|. .-++.| ++++--++... +..|...+ .+.+++..+|+=.|+--..+.-
T Consensus 20 ~l~~lY~yQ~~LvYps~pqgsR~~vptP~-~~n~pye~i~l~T~D~vt-L~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i 97 (300)
T KOG4391|consen 20 ALGFLYKYQKTLVYPSFPQGSRENVPTPK-EFNMPYERIELRTRDKVT-LDAYLMLSESSRPTLLYFHANAGNMGHRLPI 97 (300)
T ss_pred HHHHHHHHhceeeccCcccccccCCCCcc-ccCCCceEEEEEcCccee-EeeeeecccCCCceEEEEccCCCcccchhhH
Confidence 4566777776655443111 111 2333 344556 88886666543 33444333 3567888899988866444666
Q ss_pred HHHHHHHCCCeEEEEecCCCceeecccchhhhH----HHHHHHHHHHHHhhhcCCcEEEEEecccHHHHHHHHHHHHhhc
Q 040744 184 YAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQ----NIELLVNHLADCLEDEGKNLVFHTFSNTGWLTYGAILEKFQNK 259 (440)
Q Consensus 184 Ya~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k----~l~~l~~~i~~~l~~~~~~Il~H~FSnGG~~~~~~Ll~~l~~~ 259 (440)
---+|+.+++||++++++-- +.+.|..-|+ +-+.+++++..--.-++..|++.|=|.||+.+. .+...
T Consensus 98 ~~~fy~~l~mnv~ivsYRGY---G~S~GspsE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai-----~lask 169 (300)
T KOG4391|consen 98 ARVFYVNLKMNVLIVSYRGY---GKSEGSPSEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAI-----HLASK 169 (300)
T ss_pred HHHHHHHcCceEEEEEeecc---ccCCCCccccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEE-----Eeecc
Confidence 67789999999999998731 1112211111 113344444321111278999999999999652 12221
Q ss_pred CCCCccCceEEEecCCCCCCCChhhhhhhhhHHhhccccccccccccccccchhhhhccccCCCCCchHHHHH-HHHHHH
Q 040744 260 DPSLMGRIRGCIVDSAPVASPDPQVWASGFSAAFLKKNSVATKGIVYTNELETDELVGSRASGEPKPAVTETA-LLVVLE 338 (440)
Q Consensus 260 ~~~l~~~VkG~I~DSaPg~~~~~~~~a~gfsaa~l~~~s~~~~~~~~~~~~~l~~~v~~~~~~~p~~~~~~~~-ll~~l~ 338 (440)
-.+++.|+|+.-++...+. . ++ .. .+ |. ..+.+ +++.-+
T Consensus 170 ---~~~ri~~~ivENTF~SIp~--~-------~i-------------------~~-----v~--p~--~~k~i~~lc~kn 209 (300)
T KOG4391|consen 170 ---NSDRISAIIVENTFLSIPH--M-------AI-------------------PL-----VF--PF--PMKYIPLLCYKN 209 (300)
T ss_pred ---chhheeeeeeechhccchh--h-------hh-------------------he-----ec--cc--hhhHHHHHHHHh
Confidence 2358999999988876531 0 00 00 00 00 00100 011101
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhcccCCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccCh
Q 040744 339 KFFEVILHLPAVNRRLSDVLGLLSSGQPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDP 418 (440)
Q Consensus 339 ~~f~~~~~~p~~~~rl~~~~~~l~~~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~P 418 (440)
++ . . .+.+ .+.+.|-|||-|.+|++||+.++..+++.+-.+ ..+...|++..|-+-...|
T Consensus 210 ~~----~----------S-~~ki--~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~--~Krl~eFP~gtHNDT~i~d- 269 (300)
T KOG4391|consen 210 KW----L----------S-YRKI--GQCRMPFLFISGLKDELVPPVMMRQLYELCPSR--TKRLAEFPDGTHNDTWICD- 269 (300)
T ss_pred hh----c----------c-hhhh--ccccCceEEeecCccccCCcHHHHHHHHhCchh--hhhheeCCCCccCceEEec-
Confidence 11 0 1 1111 356789999999999999999999999986433 2457789999998888765
Q ss_pred HHHHHHHHHHHHHHHh
Q 040744 419 KLYTTQLSQFLEDYVV 434 (440)
Q Consensus 419 eeY~~aV~~FL~~~~~ 434 (440)
-||+++.+||.+...
T Consensus 270 -GYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 270 -GYFQAIEDFLAEVVK 284 (300)
T ss_pred -cHHHHHHHHHHHhcc
Confidence 599999999998775
No 32
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.91 E-value=1.7e-07 Score=89.25 Aligned_cols=62 Identities=16% Similarity=0.287 Sum_probs=50.7
Q ss_pred CCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHH
Q 040744 365 QPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLED 431 (440)
Q Consensus 365 ~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~ 431 (440)
..++|.|+|+|+.|.+++.+..+.+.+.. .+++.+.++++.|.-+ ..+|+++.+.+.+|+++
T Consensus 193 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~-~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 193 AWPHPALFIRGGNSPYVTEAYRDDLLAQF----PQARAHVIAGAGHWVH-AEKPDAVLRAIRRYLND 254 (255)
T ss_pred CCCCCeEEEECCCCCCCCHHHHHHHHHhC----CCcEEEEeCCCCCeee-ccCHHHHHHHHHHHHhc
Confidence 35689999999999999988777776542 2466788999999654 57799999999999974
No 33
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.90 E-value=8.5e-08 Score=92.09 Aligned_cols=62 Identities=16% Similarity=0.265 Sum_probs=50.9
Q ss_pred CCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHH
Q 040744 365 QPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLED 431 (440)
Q Consensus 365 ~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~ 431 (440)
...+|.|+|+|+.|.++|.+..+.+.+... ..+...+++++|.-++ .+|++..+++.+|-++
T Consensus 194 ~i~~P~lii~G~~D~~~~~~~~~~~~~~i~----~~~~~~i~~~gH~~~~-e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 194 NVSMPFLRLYGYLDGLVPRKVVPMLDKLWP----HSESYIFAKAAHAPFI-SHPAEFCHLLVALKQR 255 (256)
T ss_pred hcCCCeEEEecCCCccCCHHHHHHHHHhCC----CCeEEEeCCCCCCccc-cCHHHHHHHHHHHhcc
Confidence 457899999999999999988776655421 3467889999998888 7999999999999654
No 34
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.88 E-value=2.9e-07 Score=98.24 Aligned_cols=63 Identities=14% Similarity=0.191 Sum_probs=55.5
Q ss_pred CCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHHH
Q 040744 366 PACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDY 432 (440)
Q Consensus 366 ~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~ 432 (440)
..+|.|+|+|+.|.++|.+..+.+.+... +++...+++++|..++..+|++|.+.+.+||+..
T Consensus 417 I~vPtLII~Ge~D~ivP~~~~~~la~~iP----~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~~ 479 (481)
T PLN03087 417 LKCDVAIFHGGDDELIPVECSYAVKAKVP----RARVKVIDDKDHITIVVGRQKEFARELEEIWRRS 479 (481)
T ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHhCC----CCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhcc
Confidence 57899999999999999999988865432 3678899999999999999999999999999754
No 35
>PLN02965 Probable pheophorbidase
Probab=98.87 E-value=2.6e-07 Score=89.15 Aligned_cols=239 Identities=15% Similarity=0.137 Sum_probs=120.9
Q ss_pred CeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhc-C-CcEEEEEec
Q 040744 165 RTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDE-G-KNLVFHTFS 242 (440)
Q Consensus 165 ~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~-~-~~Il~H~FS 242 (440)
..||++|||.++. ..-..-++...+.||.|+.++.|-...-....+. ...++.+.+.+.++++.- . +++++-|.|
T Consensus 4 ~~vvllHG~~~~~-~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~--~~~~~~~a~dl~~~l~~l~~~~~~~lvGhS 80 (255)
T PLN02965 4 IHFVFVHGASHGA-WCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNT--VSSSDQYNRPLFALLSDLPPDHKVILVGHS 80 (255)
T ss_pred eEEEEECCCCCCc-CcHHHHHHHHhhCCceEEEecCCcCCCCCCCccc--cCCHHHHHHHHHHHHHhcCCCCCEEEEecC
Confidence 4699999998755 3445556667788999999998742110000010 112344445555555443 3 599999999
Q ss_pred ccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhhhhhhHHhhccccccccccccccccchhhhhccccCC
Q 040744 243 NTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWASGFSAAFLKKNSVATKGIVYTNELETDELVGSRASG 322 (440)
Q Consensus 243 nGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~gfsaa~l~~~s~~~~~~~~~~~~~l~~~v~~~~~~ 322 (440)
|||....... .. .+++|+++|+-++....++. .+...+.. ...... ..... . ........
T Consensus 81 mGG~ia~~~a----~~----~p~~v~~lvl~~~~~~~~~~-~~~~~~~~-~~~~~~----~~~~~----~--~~~~~~~~ 140 (255)
T PLN02965 81 IGGGSVTEAL----CK----FTDKISMAIYVAAAMVKPGS-IISPRLKN-VMEGTE----KIWDY----T--FGEGPDKP 140 (255)
T ss_pred cchHHHHHHH----Hh----CchheeEEEEEccccCCCCC-CccHHHHh-hhhccc----cceee----e--eccCCCCC
Confidence 9999764222 11 23689999987654221100 00000000 000000 00000 0 00000000
Q ss_pred CCCchHHHH-HH-HHHHH------HHHHHHhhhhhhhhhhhhhhhhc-ccCCCCCCEEEEEcCCCCccCHHHHHHHHHHH
Q 040744 323 EPKPAVTET-AL-LVVLE------KFFEVILHLPAVNRRLSDVLGLL-SSGQPACPQLYIYSSADRVIPAESVESFIEEQ 393 (440)
Q Consensus 323 ~p~~~~~~~-~l-l~~l~------~~f~~~~~~p~~~~rl~~~~~~l-~~~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~ 393 (440)
+....... .. ...+. ..+......+.-.+.+....+.- .....++|.|+|+|+.|.++|.+..+.+.+..
T Consensus 141 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~ 219 (255)
T PLN02965 141 -PTGIMMKPEFVRHYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENW 219 (255)
T ss_pred -cchhhcCHHHHHHHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhC
Confidence 00000000 00 00000 00000000000000000000000 01236789999999999999998887777543
Q ss_pred HHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHHH
Q 040744 394 RKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDY 432 (440)
Q Consensus 394 r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~ 432 (440)
. ..+.+.+++++|.-|+ .+|++..+.|.+|++..
T Consensus 220 ~----~a~~~~i~~~GH~~~~-e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 220 P----PAQTYVLEDSDHSAFF-SVPTTLFQYLLQAVSSL 253 (255)
T ss_pred C----cceEEEecCCCCchhh-cCHHHHHHHHHHHHHHh
Confidence 2 2457889999999988 89999999999998864
No 36
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.86 E-value=2.2e-07 Score=93.59 Aligned_cols=293 Identities=20% Similarity=0.228 Sum_probs=157.9
Q ss_pred ccchhhHHHHHHhHhhhccCCCCCCCCCCCCCCCCCceeeecCCCCccccCCCCCcCCCCCCeEEEEeeecCCchhh-HH
Q 040744 104 VASFPLLVNVYQSAELAKASKPTKTTGSIPASYSDVLYRWHLPETDAIDVSGTSDCLAMKSRTVVVLLGWLGAKQKH-LR 182 (440)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~y~~~~p~~~~~~~~~~~~~~~~~~~plVVLlGW~GA~~kh-l~ 182 (440)
.-+-+.++|+|-++-+-...+..+.... .+++|+.+.++.-+..+-.+...+.||++||-.|+...+ +.
T Consensus 25 ~L~ng~lqTl~~~~~~frr~~~~~~~re----------~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r 94 (345)
T COG0429 25 GLFNGHLQTLYPSLRLFRRKPKVAYTRE----------RLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYAR 94 (345)
T ss_pred cccCcchhhhhhhHHHhhcccccccceE----------EEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHH
Confidence 3456788999988776665555544433 556665555442222221223446899999999966544 66
Q ss_pred HHHHHHHHCCCeEEEEecCC-Cce--e---ecccchhhhHHHHHHHHHHHHHhhhc--CCcEEEEEecccHHHHHHHHHH
Q 040744 183 KYAEWYTSKGFHVITFTFPM-AEI--L---SYQVGGKAEQNIELLVNHLADCLEDE--GKNLVFHTFSNTGWLTYGAILE 254 (440)
Q Consensus 183 KYa~iY~~~G~nVL~~~~p~-~~i--l---~~~~g~k~~k~l~~l~~~i~~~l~~~--~~~Il~H~FSnGG~~~~~~Ll~ 254 (440)
--.+...++||.++++.++- +.. . .+..|.. .++..++ ++++.. ++++.+-|||+||.+....+.+
T Consensus 95 ~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t--~D~~~~l----~~l~~~~~~r~~~avG~SLGgnmLa~ylge 168 (345)
T COG0429 95 GLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGET--EDIRFFL----DWLKARFPPRPLYAVGFSLGGNMLANYLGE 168 (345)
T ss_pred HHHHHHHhcCCeEEEEecccccCCcccCcceecccch--hHHHHHH----HHHHHhCCCCceEEEEecccHHHHHHHHHh
Confidence 66888899999999998873 211 1 1334443 2223333 333333 8899999999999876555544
Q ss_pred HHhhcCCCCccCceEEEecCCCCCCCCh-hhhhhhhhHHhhccccccccccccccccchhhhhccccCCCCCchHHHHHH
Q 040744 255 KFQNKDPSLMGRIRGCIVDSAPVASPDP-QVWASGFSAAFLKKNSVATKGIVYTNELETDELVGSRASGEPKPAVTETAL 333 (440)
Q Consensus 255 ~l~~~~~~l~~~VkG~I~DSaPg~~~~~-~~~a~gfsaa~l~~~s~~~~~~~~~~~~~l~~~v~~~~~~~p~~~~~~~~l 333 (440)
...+ .++.+.+.=|+|-+..-. .-+..||+..+..+ ..+ +.+.+....++..+ ++..+......
T Consensus 169 ----eg~d--~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r-~l~-~~L~~~~~~kl~~l-------~~~~p~~~~~~ 233 (345)
T COG0429 169 ----EGDD--LPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSR-YLL-RNLKRNAARKLKEL-------EPSLPGTVLAA 233 (345)
T ss_pred ----hccC--cccceeeeeeCHHHHHHHHHHhcCchhhhhhHH-HHH-HHHHHHHHHHHHhc-------CcccCcHHHHH
Confidence 2222 345677777777653000 00011222100000 000 00001001111111 11111110000
Q ss_pred HHHHHHHHHH-------Hhhhhhhhhhhhhhhhhcc----cCCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEE
Q 040744 334 LVVLEKFFEV-------ILHLPAVNRRLSDVLGLLS----SGQPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRA 402 (440)
Q Consensus 334 l~~l~~~f~~-------~~~~p~~~~rl~~~~~~l~----~~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~ 402 (440)
+-.++.++.. ..++++. .+|.++-+ -.+.+.|.|.||.++|++++.+.+.+..+. ..-.|..
T Consensus 234 ik~~~ti~eFD~~~Tap~~Gf~da----~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~---~np~v~l 306 (345)
T COG0429 234 IKRCRTIREFDDLLTAPLHGFADA----EDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEM---LNPNVLL 306 (345)
T ss_pred HHhhchHHhccceeeecccCCCcH----HHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhc---CCCceEE
Confidence 0011122211 1123221 12322211 145678999999999999999999988764 2235889
Q ss_pred EEeCCCcccccccc---ChHH-HHHHHHHHHHHHHh
Q 040744 403 CNFVSTPHVDHFRN---DPKL-YTTQLSQFLEDYVV 434 (440)
Q Consensus 403 ~~F~~S~HV~H~R~---~Pee-Y~~aV~~FL~~~~~ 434 (440)
+..+..+||+=+.. +|.- =++++-+|++...+
T Consensus 307 ~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 307 QLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred EeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 99999999998873 4441 24567788776543
No 37
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=98.86 E-value=2.9e-07 Score=94.31 Aligned_cols=66 Identities=18% Similarity=0.299 Sum_probs=51.3
Q ss_pred CCCCCEEEEEcCCCCccCHHH-HHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHH
Q 040744 365 QPACPQLYIYSSADRVIPAES-VESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLED 431 (440)
Q Consensus 365 ~~~~P~LYIYS~aD~lIP~~d-VE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~ 431 (440)
..++|.|+|+|+.|.++|.+. +.+++++..+.-.+++.+.++++.|.-|+ .+|++..+.|.+|+++
T Consensus 290 ~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~-E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 290 RISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHD-DRPDLVHEKLLPWLAQ 356 (360)
T ss_pred hcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccc-cCHHHHHHHHHHHHHh
Confidence 457899999999999999874 33344433333235788899999999775 6799999999999986
No 38
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.84 E-value=4.9e-07 Score=94.30 Aligned_cols=69 Identities=12% Similarity=0.106 Sum_probs=54.1
Q ss_pred CCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHHHHhhhhh
Q 040744 365 QPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDYVVTCCK 438 (440)
Q Consensus 365 ~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~~~~~~~ 438 (440)
..++|.|+|||+.|.+++ +..++..+. .+..++...+++++|.-+ -++|+++.+.|.+|++......|+
T Consensus 323 ~I~vP~liI~G~~D~i~~-~~~~~~~~~---~~~~~~~~~i~~aGH~~~-~E~P~~f~~~l~~~~~~~~~~~~~ 391 (402)
T PLN02894 323 EWKVPTTFIYGRHDWMNY-EGAVEARKR---MKVPCEIIRVPQGGHFVF-LDNPSGFHSAVLYACRKYLSPDRE 391 (402)
T ss_pred cCCCCEEEEEeCCCCCCc-HHHHHHHHH---cCCCCcEEEeCCCCCeee-ccCHHHHHHHHHHHHHHhccCCch
Confidence 347899999999998776 555554432 233477888999999754 569999999999999999988776
No 39
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.84 E-value=5.5e-08 Score=106.78 Aligned_cols=212 Identities=17% Similarity=0.222 Sum_probs=132.2
Q ss_pred CeEEEEeeecCCchhh-HHHHHHHHHHCCCeEEEEecCCCceee--------cccchhhhHHHHHHHHHHHHHhhhc---
Q 040744 165 RTVVVLLGWLGAKQKH-LRKYAEWYTSKGFHVITFTFPMAEILS--------YQVGGKAEQNIELLVNHLADCLEDE--- 232 (440)
Q Consensus 165 ~plVVLlGW~GA~~kh-l~KYa~iY~~~G~nVL~~~~p~~~il~--------~~~g~k~~k~l~~l~~~i~~~l~~~--- 232 (440)
|.+|.+||==.++..+ ...+.+.|..+||.|+...++-+...+ -.+|+ ..++++++.+. ++.+.
T Consensus 395 P~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~---~~~~D~~~~~~-~l~~~~~~ 470 (620)
T COG1506 395 PLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGG---VDLEDLIAAVD-ALVKLPLV 470 (620)
T ss_pred CEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCC---ccHHHHHHHHH-HHHhCCCc
Confidence 5688899932122222 556688999999999999887543321 12333 33456666654 55443
Q ss_pred -CCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhhhhhhHHhhccccccccccccccccc
Q 040744 233 -GKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWASGFSAAFLKKNSVATKGIVYTNELE 311 (440)
Q Consensus 233 -~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~gfsaa~l~~~s~~~~~~~~~~~~~ 311 (440)
..+|.+-|+|.||+|++..+ .+ .+..++.|...+.++. ...+.. . +.+... .
T Consensus 471 d~~ri~i~G~SyGGymtl~~~---~~------~~~f~a~~~~~~~~~~------~~~~~~-----~---~~~~~~----~ 523 (620)
T COG1506 471 DPERIGITGGSYGGYMTLLAA---TK------TPRFKAAVAVAGGVDW------LLYFGE-----S---TEGLRF----D 523 (620)
T ss_pred ChHHeEEeccChHHHHHHHHH---hc------CchhheEEeccCcchh------hhhccc-----c---chhhcC----C
Confidence 57999999999999984211 11 1357888888877652 111110 0 000000 0
Q ss_pred hhhhhccccCCCCCchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcccCCCCCCEEEEEcCCCCccCHHHHHHHHH
Q 040744 312 TDELVGSRASGEPKPAVTETALLVVLEKFFEVILHLPAVNRRLSDVLGLLSSGQPACPQLYIYSSADRVIPAESVESFIE 391 (440)
Q Consensus 312 l~~~v~~~~~~~p~~~~~~~~ll~~l~~~f~~~~~~p~~~~rl~~~~~~l~~~~~~~P~LYIYS~aD~lIP~~dVE~~~e 391 (440)
...... .|.. -.+ .+. ...| .......++|.|+|||+.|.-||.+..+++++
T Consensus 524 ~~~~~~-----~~~~-~~~-----~~~------~~sp-----------~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~ 575 (620)
T COG1506 524 PEENGG-----GPPE-DRE-----KYE------DRSP-----------IFYADNIKTPLLLIHGEEDDRVPIEQAEQLVD 575 (620)
T ss_pred HHHhCC-----Cccc-ChH-----HHH------hcCh-----------hhhhcccCCCEEEEeecCCccCChHHHHHHHH
Confidence 000000 0000 000 000 0011 11234567999999999999999999999999
Q ss_pred HHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHHHHhh
Q 040744 392 EQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDYVVT 435 (440)
Q Consensus 392 ~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~~~~ 435 (440)
+.+++|.+|+.+.|++..|.=-...|-....+.+.+|+++.+..
T Consensus 576 aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 576 ALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred HHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999998777677777778888888877653
No 40
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.82 E-value=4.8e-07 Score=91.83 Aligned_cols=63 Identities=17% Similarity=0.209 Sum_probs=54.2
Q ss_pred CCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHH
Q 040744 366 PACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLE 430 (440)
Q Consensus 366 ~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~ 430 (440)
..+|.|+|+|+.|.+++.+..+++++..... +++...++++.|.-+.-.++++..+.+.+|++
T Consensus 269 ~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~--~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 269 KDIPILFIHSKGDCVCSYEGTVSFYNKLSIS--NKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCCCEEEEEeCCCCccCHHHHHHHHHhccCC--CcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 3689999999999999999999988754332 46788899999999998888999999999985
No 41
>PRK06489 hypothetical protein; Provisional
Probab=98.80 E-value=4.2e-07 Score=92.84 Aligned_cols=63 Identities=22% Similarity=0.298 Sum_probs=50.6
Q ss_pred CCCCCEEEEEcCCCCccCHHHH--HHHHHHHHHcCCceEEEEeCCC----ccccccccChHHHHHHHHHHHHHHH
Q 040744 365 QPACPQLYIYSSADRVIPAESV--ESFIEEQRKAGREVRACNFVST----PHVDHFRNDPKLYTTQLSQFLEDYV 433 (440)
Q Consensus 365 ~~~~P~LYIYS~aD~lIP~~dV--E~~~e~~r~~G~~V~~~~F~~S----~HV~H~R~~PeeY~~aV~~FL~~~~ 433 (440)
+.++|.|+|+|+.|.++|.+.. +++.+... +.+.+.++++ +|.-+ .+|++|.+.|.+|++++.
T Consensus 290 ~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip----~a~l~~i~~a~~~~GH~~~--e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 290 KIKAPVLAINSADDERNPPETGVMEAALKRVK----HGRLVLIPASPETRGHGTT--GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred hCCCCEEEEecCCCcccChhhHHHHHHHHhCc----CCeEEEECCCCCCCCcccc--cCHHHHHHHHHHHHHhcc
Confidence 4579999999999999999875 55544321 3467888986 99875 699999999999998764
No 42
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.79 E-value=8.6e-07 Score=84.82 Aligned_cols=61 Identities=13% Similarity=0.096 Sum_probs=49.8
Q ss_pred CCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHH
Q 040744 365 QPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLE 430 (440)
Q Consensus 365 ~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~ 430 (440)
..++|.|+|+|+.|.++|.+.++++.+... .++...+++++|.-++ .+|+++.+.|.+|++
T Consensus 218 ~i~~P~lii~g~~D~~vp~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 218 RITIPLHLIAGEEDKAVPPDESKRAATRVP----TATLHVVPGGGHLVHE-EQADGVVGLILQAAE 278 (278)
T ss_pred cCCCCEEEEEeCCCcccCHHHHHHHHHhcc----CCeEEEECCCCCcccc-cCHHHHHHHHHHHhC
Confidence 356899999999999999998888765432 2457778999997654 579999999999984
No 43
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.79 E-value=6.6e-07 Score=89.88 Aligned_cols=68 Identities=18% Similarity=0.182 Sum_probs=55.9
Q ss_pred CCCCCCEEEEEcCCCCccCH-HHHHHHHHHHHHcCCceEEEEeCCCccccccccCh--HHHHHHHHHHHHHHH
Q 040744 364 GQPACPQLYIYSSADRVIPA-ESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDP--KLYTTQLSQFLEDYV 433 (440)
Q Consensus 364 ~~~~~P~LYIYS~aD~lIP~-~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~P--eeY~~aV~~FL~~~~ 433 (440)
.....|.|.++|++|.++++ +...++++.+.. .+++...++|+.|--+.-.+. +++++.+.+|+.+..
T Consensus 225 ~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~--~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 225 PAIALPVLLLQGGDDRVVDNVEGLARFFERAGS--PDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEAL 295 (298)
T ss_pred ccccCCEEEEecCCCccccCcHHHHHHHHhcCC--CCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhc
Confidence 44578999999999999995 666666654322 247899999999999999999 999999999998764
No 44
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.79 E-value=3.1e-07 Score=86.92 Aligned_cols=182 Identities=19% Similarity=0.215 Sum_probs=107.2
Q ss_pred CCCeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCce--ee-cc-----cchh----hhHHHHHHHHHHHHHhh
Q 040744 163 KSRTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEI--LS-YQ-----VGGK----AEQNIELLVNHLADCLE 230 (440)
Q Consensus 163 ~~~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~i--l~-~~-----~g~k----~~k~l~~l~~~i~~~l~ 230 (440)
+.+.|||+|+|.|-. .++..+++.+.++||.|++.++=...- .. .. .... .++..+++... .++++
T Consensus 13 ~~~~Vvv~~d~~G~~-~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa-~~~l~ 90 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLN-PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAA-VDYLR 90 (218)
T ss_dssp SEEEEEEE-BTTBS--HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHH-HHHHH
T ss_pred CCCEEEEEcCCCCCc-hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHH-HHHHH
Confidence 457899999999977 689999999999999999987632211 10 00 0000 01112222122 24444
Q ss_pred hc----CCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhhhhhhHHhhcccccccccccc
Q 040744 231 DE----GKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWASGFSAAFLKKNSVATKGIVY 306 (440)
Q Consensus 231 ~~----~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~gfsaa~l~~~s~~~~~~~~ 306 (440)
+. ..+|.+-|||+||..++. +.... +.+++.|.=-+ ...
T Consensus 91 ~~~~~~~~kig~vGfc~GG~~a~~-----~a~~~----~~~~a~v~~yg-~~~--------------------------- 133 (218)
T PF01738_consen 91 AQPEVDPGKIGVVGFCWGGKLALL-----LAARD----PRVDAAVSFYG-GSP--------------------------- 133 (218)
T ss_dssp CTTTCEEEEEEEEEETHHHHHHHH-----HHCCT----TTSSEEEEES--SSS---------------------------
T ss_pred hccccCCCcEEEEEEecchHHhhh-----hhhhc----cccceEEEEcC-CCC---------------------------
Confidence 43 579999999999998741 22111 23444432110 000
Q ss_pred ccccchhhhhccccCCCCCchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcccCCCCCCEEEEEcCCCCccCHHHH
Q 040744 307 TNELETDELVGSRASGEPKPAVTETALLVVLEKFFEVILHLPAVNRRLSDVLGLLSSGQPACPQLYIYSSADRVIPAESV 386 (440)
Q Consensus 307 ~~~~~l~~~v~~~~~~~p~~~~~~~~ll~~l~~~f~~~~~~p~~~~rl~~~~~~l~~~~~~~P~LYIYS~aD~lIP~~dV 386 (440)
+.... .. ....++|.|+++++.|+.+|.+.+
T Consensus 134 -------------------~~~~~------------------------~~------~~~~~~P~l~~~g~~D~~~~~~~~ 164 (218)
T PF01738_consen 134 -------------------PPPPL------------------------ED------APKIKAPVLILFGENDPFFPPEEV 164 (218)
T ss_dssp -------------------GGGHH------------------------HH------GGG--S-EEEEEETT-TTS-HHHH
T ss_pred -------------------CCcch------------------------hh------hcccCCCEeecCccCCCCCChHHH
Confidence 00000 00 012357999999999999999999
Q ss_pred HHHHHHHHHcCCceEEEEeCCCccccccccCh-------HHHHHHHHHHHHHH
Q 040744 387 ESFIEEQRKAGREVRACNFVSTPHVDHFRNDP-------KLYTTQLSQFLEDY 432 (440)
Q Consensus 387 E~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~P-------eeY~~aV~~FL~~~ 432 (440)
+++.+..+++|.+++.+.|+|..|-=..+..+ ++-|+++.+|+++.
T Consensus 165 ~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 165 EALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp HHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999986666655 45566777777653
No 45
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=98.79 E-value=1.4e-06 Score=85.81 Aligned_cols=47 Identities=17% Similarity=0.138 Sum_probs=41.0
Q ss_pred CCCEEEEEcCCCCccCH-HHHHHHHHHHHHcCCceEEEEeCCCccccc
Q 040744 367 ACPQLYIYSSADRVIPA-ESVESFIEEQRKAGREVRACNFVSTPHVDH 413 (440)
Q Consensus 367 ~~P~LYIYS~aD~lIP~-~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H 413 (440)
..|.+++||+.|.++|. ...+.+.+..+++|.+++...++|..|.=.
T Consensus 211 ~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~~H~f~ 258 (275)
T TIGR02821 211 HSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGYDHSYY 258 (275)
T ss_pred CCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCCCccch
Confidence 45778889999999999 678889999999999999999999999743
No 46
>PRK03204 haloalkane dehalogenase; Provisional
Probab=98.75 E-value=1.2e-06 Score=86.69 Aligned_cols=58 Identities=9% Similarity=0.164 Sum_probs=46.6
Q ss_pred CCCEEEEEcCCCCccCHHHH-HHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHH
Q 040744 367 ACPQLYIYSSADRVIPAESV-ESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFL 429 (440)
Q Consensus 367 ~~P~LYIYS~aD~lIP~~dV-E~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL 429 (440)
.+|.|+|+|+.|.+++.+.+ +++.+... ..+.+.+++++|.-|+ .+|++..+.+.+|+
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~ip----~~~~~~i~~aGH~~~~-e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRATFP----DHVLVELPNAKHFIQE-DAPDRIAAAIIERF 285 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHhcC----CCeEEEcCCCcccccc-cCHHHHHHHHHHhc
Confidence 68999999999999976654 44443221 3567889999999877 79999999999997
No 47
>PLN02578 hydrolase
Probab=98.74 E-value=5.1e-07 Score=92.07 Aligned_cols=60 Identities=18% Similarity=0.308 Sum_probs=48.1
Q ss_pred CCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHH
Q 040744 365 QPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLE 430 (440)
Q Consensus 365 ~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~ 430 (440)
+.++|.|+|+|+.|.++|.+..+++.+.. .+. +.+.+ +++|+-|. .+|+++.+.|.+|++
T Consensus 294 ~i~~PvLiI~G~~D~~v~~~~~~~l~~~~--p~a--~l~~i-~~GH~~~~-e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 294 KLSCPLLLLWGDLDPWVGPAKAEKIKAFY--PDT--TLVNL-QAGHCPHD-EVPEQVNKALLEWLS 353 (354)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCC--EEEEe-CCCCCccc-cCHHHHHHHHHHHHh
Confidence 45799999999999999999988876653 222 34445 58999764 799999999999986
No 48
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=98.74 E-value=1.1e-06 Score=86.69 Aligned_cols=103 Identities=17% Similarity=0.169 Sum_probs=65.0
Q ss_pred CCCCeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhc--CCcEEEE
Q 040744 162 MKSRTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDE--GKNLVFH 239 (440)
Q Consensus 162 ~~~~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~--~~~Il~H 239 (440)
++.++||++|||++.. ..-.+.+....+.||+|+.++.|.... +..... ....+++..+.+.++++.. .+++++-
T Consensus 16 ~~~p~vvliHG~~~~~-~~w~~~~~~L~~~g~~vi~~dl~g~G~-s~~~~~-~~~~~~~~~~~l~~~i~~l~~~~~v~lv 92 (273)
T PLN02211 16 RQPPHFVLIHGISGGS-WCWYKIRCLMENSGYKVTCIDLKSAGI-DQSDAD-SVTTFDEYNKPLIDFLSSLPENEKVILV 92 (273)
T ss_pred CCCCeEEEECCCCCCc-CcHHHHHHHHHhCCCEEEEecccCCCC-CCCCcc-cCCCHHHHHHHHHHHHHhcCCCCCEEEE
Confidence 4557899999998865 355677777878899999999885221 110000 0012233344444554443 4799999
Q ss_pred EecccHHHHHHHHHHHHhhcCCCCccCceEEEecCC
Q 040744 240 TFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSA 275 (440)
Q Consensus 240 ~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSa 275 (440)
|+||||....... . . .+++|+++|+=++
T Consensus 93 GhS~GG~v~~~~a----~-~---~p~~v~~lv~~~~ 120 (273)
T PLN02211 93 GHSAGGLSVTQAI----H-R---FPKKICLAVYVAA 120 (273)
T ss_pred EECchHHHHHHHH----H-h---ChhheeEEEEecc
Confidence 9999999764322 1 1 2357888888654
No 49
>PRK00870 haloalkane dehalogenase; Provisional
Probab=98.71 E-value=6e-07 Score=88.79 Aligned_cols=65 Identities=9% Similarity=0.082 Sum_probs=49.5
Q ss_pred CCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHH
Q 040744 364 GQPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLED 431 (440)
Q Consensus 364 ~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~ 431 (440)
....+|.|+|+|+.|.++|.+. +++.+.... ...++.+.++++.|.-| -.+|++-.+.+.+|+++
T Consensus 236 ~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~-~~~~~~~~i~~~gH~~~-~e~p~~~~~~l~~fl~~ 300 (302)
T PRK00870 236 ERWDKPFLTAFSDSDPITGGGD-AILQKRIPG-AAGQPHPTIKGAGHFLQ-EDSGEELAEAVLEFIRA 300 (302)
T ss_pred hcCCCceEEEecCCCCcccCch-HHHHhhccc-ccccceeeecCCCccch-hhChHHHHHHHHHHHhc
Confidence 3457999999999999999866 666554322 11134567899999965 58899999999999975
No 50
>PRK11071 esterase YqiA; Provisional
Probab=98.70 E-value=7.5e-07 Score=83.53 Aligned_cols=55 Identities=15% Similarity=0.105 Sum_probs=45.8
Q ss_pred CCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHH
Q 040744 366 PACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLE 430 (440)
Q Consensus 366 ~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~ 430 (440)
.++|.+.|||++|++||++..+++++.+ .....+|+.|.- .+.++|++.+.+|++
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~~-------~~~~~~ggdH~f---~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAAC-------RQTVEEGGNHAF---VGFERYFNQIVDFLG 189 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHhc-------ceEEECCCCcch---hhHHHhHHHHHHHhc
Confidence 5568889999999999999999999853 234568888876 777999999999975
No 51
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.70 E-value=2.6e-06 Score=83.89 Aligned_cols=238 Identities=15% Similarity=0.071 Sum_probs=118.5
Q ss_pred CCCeEEEEeeecCC---chhhHHHHHHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhc---CCcE
Q 040744 163 KSRTVVVLLGWLGA---KQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDE---GKNL 236 (440)
Q Consensus 163 ~~~plVVLlGW~GA---~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~---~~~I 236 (440)
+.+++|++||+.+- ..+...+.++.+.+.||+|++++.+--.- +...-...+...+++.+.+ ++++++ .++|
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~-S~~~~~~~~~~~~d~~~~~-~~l~~~~~g~~~i 102 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGD-SEGENLGFEGIDADIAAAI-DAFREAAPHLRRI 102 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCC-CCCCCCCHHHHHHHHHHHH-HHHHhhCCCCCcE
Confidence 35689999998752 22345566888889999999999873111 1110011122223444333 233322 3579
Q ss_pred EEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhhhhhhHHhhccccccccccccccccchhh-h
Q 040744 237 VFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWASGFSAAFLKKNSVATKGIVYTNELETDE-L 315 (440)
Q Consensus 237 l~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~gfsaa~l~~~s~~~~~~~~~~~~~l~~-~ 315 (440)
++.|+||||.+++.. ... ..+|+|+|+-|++....+... ...+...+..+. . .+. .... +
T Consensus 103 ~l~G~S~Gg~~a~~~-----a~~----~~~v~~lil~~p~~~~~~~~~-~~~~~~~~~~~~--~-~~~------~~~~~~ 163 (274)
T TIGR03100 103 VAWGLCDAASAALLY-----APA----DLRVAGLVLLNPWVRTEAAQA-ASRIRHYYLGQL--L-SAD------FWRKLL 163 (274)
T ss_pred EEEEECHHHHHHHHH-----hhh----CCCccEEEEECCccCCcccch-HHHHHHHHHHHH--h-ChH------HHHHhc
Confidence 999999999876422 111 147999999997754221111 001111100000 0 000 0000 0
Q ss_pred hccccCCCCCchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcccCCCCCCEEEEEcCCCCccCHHHHHHHH--HHH
Q 040744 316 VGSRASGEPKPAVTETALLVVLEKFFEVILHLPAVNRRLSDVLGLLSSGQPACPQLYIYSSADRVIPAESVESFI--EEQ 393 (440)
Q Consensus 316 v~~~~~~~p~~~~~~~~ll~~l~~~f~~~~~~p~~~~rl~~~~~~l~~~~~~~P~LYIYS~aD~lIP~~dVE~~~--e~~ 393 (440)
-+...+ -.+.. .+...+..... .-..+....-..++.+.+. ...+|.|++||..|..++ +..+++- +.+
T Consensus 164 ~g~~~~----~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~--~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~ 234 (274)
T TIGR03100 164 SGEVNL----GSSLR-GLGDALLKARQ-KGDEVAHGGLAERMKAGLE--RFQGPVLFILSGNDLTAQ-EFADSVLGEPAW 234 (274)
T ss_pred CCCccH----HHHHH-HHHHHHHhhhh-cCCCcccchHHHHHHHHHH--hcCCcEEEEEcCcchhHH-HHHHHhccChhh
Confidence 000000 00000 00000000000 0000000000012222331 236899999999999853 2222211 222
Q ss_pred HH-cC-CceEEEEeCCCccccccccChHHHHHHHHHHHH
Q 040744 394 RK-AG-REVRACNFVSTPHVDHFRNDPKLYTTQLSQFLE 430 (440)
Q Consensus 394 r~-~G-~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~ 430 (440)
++ .+ ..|+...++++.|+-+-...+++..+.|.+||+
T Consensus 235 ~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 235 RGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred HHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 22 12 468899999999999999999999999999996
No 52
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.69 E-value=1.2e-06 Score=87.15 Aligned_cols=58 Identities=21% Similarity=0.193 Sum_probs=44.6
Q ss_pred CCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHHH
Q 040744 367 ACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDY 432 (440)
Q Consensus 367 ~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~ 432 (440)
.+|.|+|+|+.|.++|.+..+++++... ..+.+.++++.|.. .+|+.. ++|.+|+++.
T Consensus 248 ~~P~lii~g~~D~~~p~~~~~~~~~~~~----~~~~~~~~~~gH~~---~~~~~~-~~i~~~~~~~ 305 (306)
T TIGR01249 248 NIPTYIVHGRYDLCCPLQSAWALHKAFP----EAELKVTNNAGHSA---FDPNNL-AALVHALETY 305 (306)
T ss_pred CCCeEEEecCCCCCCCHHHHHHHHHhCC----CCEEEEECCCCCCC---CChHHH-HHHHHHHHHh
Confidence 5899999999999999999998887532 35677788777765 577777 6677776653
No 53
>PRK05855 short chain dehydrogenase; Validated
Probab=98.64 E-value=5.8e-07 Score=95.96 Aligned_cols=62 Identities=10% Similarity=0.161 Sum_probs=49.3
Q ss_pred CCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHHHH
Q 040744 366 PACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDYV 433 (440)
Q Consensus 366 ~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~~ 433 (440)
.++|.|+|+|+.|.++|.+..+.+.+.. . ..+.+.++ +.|..| ..+|+++.+.|.+|+++..
T Consensus 232 ~~~P~lii~G~~D~~v~~~~~~~~~~~~--~--~~~~~~~~-~gH~~~-~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 232 TDVPVQLIVPTGDPYVRPALYDDLSRWV--P--RLWRREIK-AGHWLP-MSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred ccCceEEEEeCCCcccCHHHhccccccC--C--cceEEEcc-CCCcch-hhChhHHHHHHHHHHHhcc
Confidence 5789999999999999999888776432 1 23455555 689988 4689999999999998753
No 54
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=98.63 E-value=1.9e-06 Score=89.33 Aligned_cols=309 Identities=16% Similarity=0.187 Sum_probs=160.9
Q ss_pred CCCCCCCCcccCcccchhhHHHHHHhHhhhccCCCCCCCCCCC-CCCCCCc-eeeecCCCCccccCCCCCcCCCCCCeEE
Q 040744 91 SGHKFIPSNLCSSVASFPLLVNVYQSAELAKASKPTKTTGSIP-ASYSDVL-YRWHLPETDAIDVSGTSDCLAMKSRTVV 168 (440)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~-y~~~~p~~~~~~~~~~~~~~~~~~~plV 168 (440)
..+.+.| ......+-+||+|++..= ..|.+.....+= +.|.+.- +.|.-++-..+. ...++.+.+|
T Consensus 62 l~~~y~p----~~w~~~ghlQT~~~~~~~--~~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~------~~~~~~P~vv 129 (409)
T KOG1838|consen 62 LEEKYLP----TLWLFSGHLQTLLLSFFG--SKPPVEYTREIIKTSDGGTVTLDWVENPDSRCR------TDDGTDPIVV 129 (409)
T ss_pred ccccccc----ceeecCCeeeeeehhhcC--CCCCCcceeEEEEeCCCCEEEEeeccCcccccC------CCCCCCcEEE
Confidence 3444444 567788999999998654 333333333333 2222222 355443322221 1124568899
Q ss_pred EEeeecC-CchhhHHHHHHHHHHCCCeEEEEecCC-C--ceee---cccchhhhHHHHHHHHHHHHHhhhc--CCcEEEE
Q 040744 169 VLLGWLG-AKQKHLRKYAEWYTSKGFHVITFTFPM-A--EILS---YQVGGKAEQNIELLVNHLADCLEDE--GKNLVFH 239 (440)
Q Consensus 169 VLlGW~G-A~~khl~KYa~iY~~~G~nVL~~~~p~-~--~il~---~~~g~k~~k~l~~l~~~i~~~l~~~--~~~Il~H 239 (440)
+++|-.| +++.++.-.+..-+++||.++++..+- . .+.. +..|.. .+++.++++| +.. ..+++.-
T Consensus 130 ilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t--~Dl~~~v~~i----~~~~P~a~l~av 203 (409)
T KOG1838|consen 130 ILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWT--EDLREVVNHI----KKRYPQAPLFAV 203 (409)
T ss_pred EecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCH--HHHHHHHHHH----HHhCCCCceEEE
Confidence 9999999 455668888888899999999997763 2 1211 223332 3345555555 333 6789999
Q ss_pred EecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhhh-hhhHHhhccccccccccccccccchhhhhcc
Q 040744 240 TFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWAS-GFSAAFLKKNSVATKGIVYTNELETDELVGS 318 (440)
Q Consensus 240 ~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~-gfsaa~l~~~s~~~~~~~~~~~~~l~~~v~~ 318 (440)
||||||.+...+|.|. ++-.+=+.|+++.++.........+.. .++. +. +..+++++.+..+.+-..+...
T Consensus 204 G~S~Gg~iL~nYLGE~-----g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~-~y--~~~l~~~l~~~~~~~r~~~~~~ 275 (409)
T KOG1838|consen 204 GFSMGGNILTNYLGEE-----GDNTPLIAAVAVCNPWDLLAASRSIETPLYRR-FY--NRALTLNLKRIVLRHRHTLFED 275 (409)
T ss_pred EecchHHHHHHHhhhc-----cCCCCceeEEEEeccchhhhhhhHHhcccchH-HH--HHHHHHhHHHHHhhhhhhhhhc
Confidence 9999999877666442 111234678888775532100000000 0000 00 0001111111000000000000
Q ss_pred ccCCCCCchHHHH-HHHHHHHHHHHHHhhhhhhh---hhhhhhhhhcccCCCCCCEEEEEcCCCCccCHHHHHHHHHHHH
Q 040744 319 RASGEPKPAVTET-ALLVVLEKFFEVILHLPAVN---RRLSDVLGLLSSGQPACPQLYIYSSADRVIPAESVESFIEEQR 394 (440)
Q Consensus 319 ~~~~~p~~~~~~~-~ll~~l~~~f~~~~~~p~~~---~rl~~~~~~l~~~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r 394 (440)
... ...+.+. .+.-+=+.+.....++++.. ++-+ .... -+..+.|.|+|.+.+|+++|.+.+-- +..+
T Consensus 276 ~vd---~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aS-s~~~--v~~I~VP~L~ina~DDPv~p~~~ip~--~~~~ 347 (409)
T KOG1838|consen 276 PVD---FDVILKSRSVREFDEALTRPMFGFKSVDEYYKKAS-SSNY--VDKIKVPLLCINAADDPVVPEEAIPI--DDIK 347 (409)
T ss_pred cch---hhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcc-hhhh--cccccccEEEEecCCCCCCCcccCCH--HHHh
Confidence 000 0000000 00000011222333444432 1111 1111 24567899999999999999975432 3333
Q ss_pred HcCCceEEEEeCCCcccccccc---ChHHHHHH-HHHHHHHHHh
Q 040744 395 KAGREVRACNFVSTPHVDHFRN---DPKLYTTQ-LSQFLEDYVV 434 (440)
Q Consensus 395 ~~G~~V~~~~F~~S~HV~H~R~---~PeeY~~a-V~~FL~~~~~ 434 (440)
++ ..|-.+.-.-.+|++=+.. .+..|.++ +.+|++....
T Consensus 348 ~n-p~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~~ 390 (409)
T KOG1838|consen 348 SN-PNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAIF 390 (409)
T ss_pred cC-CcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHHh
Confidence 33 2466677778888888888 78889999 9999987654
No 55
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.61 E-value=1.8e-06 Score=87.46 Aligned_cols=67 Identities=13% Similarity=0.114 Sum_probs=54.9
Q ss_pred CCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCC-CccccccccChHHHHHHHHHHHHHHHh
Q 040744 364 GQPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVS-TPHVDHFRNDPKLYTTQLSQFLEDYVV 434 (440)
Q Consensus 364 ~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~-S~HV~H~R~~PeeY~~aV~~FL~~~~~ 434 (440)
.+.++|.|+|+|+.|.++|.++++++++.... ..+.+.+++ ++|.-++ .+|++..+.|.+||+++..
T Consensus 274 ~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p---~a~l~~i~~~aGH~~~l-E~Pe~~~~~l~~FL~~~~~ 341 (343)
T PRK08775 274 EAIRVPTVVVAVEGDRLVPLADLVELAEGLGP---RGSLRVLRSPYGHDAFL-KETDRIDAILTTALRSTGE 341 (343)
T ss_pred hcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCC---CCeEEEEeCCccHHHHh-cCHHHHHHHHHHHHHhccc
Confidence 34678999999999999999999888765421 356788874 9998877 6899999999999987754
No 56
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.60 E-value=1.7e-06 Score=88.03 Aligned_cols=65 Identities=15% Similarity=0.159 Sum_probs=52.5
Q ss_pred CCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEE-EEeCCCccccccccChHHHHHHHHHHHH
Q 040744 365 QPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRA-CNFVSTPHVDHFRNDPKLYTTQLSQFLE 430 (440)
Q Consensus 365 ~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~-~~F~~S~HV~H~R~~PeeY~~aV~~FL~ 430 (440)
..++|.|+|+|+.|.++|.+.++++++...+....|+. +.++++.|..++ .+|+++.+.|.+||+
T Consensus 286 ~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~l-e~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 286 RIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFL-VETDQVEELIRGFLR 351 (351)
T ss_pred hCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhh-cCHHHHHHHHHHHhC
Confidence 45789999999999999999999998876543332222 245789999887 789999999999984
No 57
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.56 E-value=3e-06 Score=102.40 Aligned_cols=68 Identities=19% Similarity=0.264 Sum_probs=51.8
Q ss_pred CCCCCEEEEEcCCCCccCHHHHHHHHHHHHHc-------C-CceEEEEeCCCccccccccChHHHHHHHHHHHHHHHh
Q 040744 365 QPACPQLYIYSSADRVIPAESVESFIEEQRKA-------G-REVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDYVV 434 (440)
Q Consensus 365 ~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~-------G-~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~~~ 434 (440)
..++|.|+|+|+.|.+++ +..+++.+...+. + ..++.+.+++++|.-|+ .+|+++.+.|.+||++...
T Consensus 1566 ~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~l-E~Pe~f~~~I~~FL~~~~~ 1641 (1655)
T PLN02980 1566 QCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHL-ENPLPVIRALRKFLTRLHN 1641 (1655)
T ss_pred hCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHH-HCHHHHHHHHHHHHHhccc
Confidence 456899999999999886 5555555432211 0 12678889999999887 8899999999999998653
No 58
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.56 E-value=1.2e-06 Score=89.22 Aligned_cols=61 Identities=21% Similarity=0.476 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHHH
Q 040744 367 ACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDY 432 (440)
Q Consensus 367 ~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~ 432 (440)
+||.|+|+|..|+++|.+..+++.++ . -.++.+..+++.|+-|+ ..|+++.+.+..||++.
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~~---~-pn~~~~~I~~~gH~~h~-e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKKK---L-PNAELVEIPGAGHLPHL-ERPEEVAALLRSFIARL 324 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHhh---C-CCceEEEeCCCCccccc-CCHHHHHHHHHHHHHHh
Confidence 49999999999999999966666543 2 45788999999999999 99999999999999875
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=98.52 E-value=3.4e-06 Score=85.86 Aligned_cols=64 Identities=16% Similarity=0.346 Sum_probs=50.9
Q ss_pred CCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccC--hHHHHHHHHHHHHH
Q 040744 365 QPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRND--PKLYTTQLSQFLED 431 (440)
Q Consensus 365 ~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~--PeeY~~aV~~FL~~ 431 (440)
..++|.|+++|+.|.++|++.++.+.+... +.+++.+.++ +.|.+.+... +++=|..+.+|+++
T Consensus 284 ~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~--~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 284 NIKMPILNIYAERDHLVPPDASKALNDLVS--SEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred hCCCCeEEEecCCCCcCCHHHHHHHHHHcC--CCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 357899999999999999999998887542 2345566665 7999988775 58888899999864
No 60
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.52 E-value=1.4e-05 Score=77.81 Aligned_cols=180 Identities=17% Similarity=0.184 Sum_probs=115.0
Q ss_pred CeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCC--Cceeecc-------cc----hhhhHHHHHHHHHHHHHhhh
Q 040744 165 RTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPM--AEILSYQ-------VG----GKAEQNIELLVNHLADCLED 231 (440)
Q Consensus 165 ~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~--~~il~~~-------~g----~k~~k~l~~l~~~i~~~l~~ 231 (440)
+.|||+|+|.|=++ |+..+++...+.||.|++.+.=. ....... .+ ....+.+.++...+ ++++.
T Consensus 28 P~VIv~hei~Gl~~-~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~-~~L~~ 105 (236)
T COG0412 28 PGVIVLHEIFGLNP-HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAAL-DYLAR 105 (236)
T ss_pred CEEEEEecccCCch-HHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHH-HHHHh
Confidence 68999999999885 99999999999999999865422 1111000 00 00012233333333 44543
Q ss_pred c----CCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhhhhhhHHhhccccccccccccc
Q 040744 232 E----GKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWASGFSAAFLKKNSVATKGIVYT 307 (440)
Q Consensus 232 ~----~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~gfsaa~l~~~s~~~~~~~~~ 307 (440)
. ..+|.+-||||||.+++. +.... +.+++.|. .++...
T Consensus 106 ~~~~~~~~ig~~GfC~GG~~a~~-----~a~~~----~~v~a~v~--fyg~~~--------------------------- 147 (236)
T COG0412 106 QPQVDPKRIGVVGFCMGGGLALL-----AATRA----PEVKAAVA--FYGGLI--------------------------- 147 (236)
T ss_pred CCCCCCceEEEEEEcccHHHHHH-----hhccc----CCccEEEE--ecCCCC---------------------------
Confidence 3 578999999999998852 11111 12333321 111000
Q ss_pred cccchhhhhccccCCCCCchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcccCCCCCCEEEEEcCCCCccCHHHHH
Q 040744 308 NELETDELVGSRASGEPKPAVTETALLVVLEKFFEVILHLPAVNRRLSDVLGLLSSGQPACPQLYIYSSADRVIPAESVE 387 (440)
Q Consensus 308 ~~~~l~~~v~~~~~~~p~~~~~~~~ll~~l~~~f~~~~~~p~~~~rl~~~~~~l~~~~~~~P~LYIYS~aD~lIP~~dVE 387 (440)
. . . .....+.++|.|.++++.|..+|.+.++
T Consensus 148 ---------~----------------------------~---------~---~~~~~~~~~pvl~~~~~~D~~~p~~~~~ 178 (236)
T COG0412 148 ---------A----------------------------D---------D---TADAPKIKVPVLLHLAGEDPYIPAADVD 178 (236)
T ss_pred ---------C----------------------------C---------c---ccccccccCcEEEEecccCCCCChhHHH
Confidence 0 0 0 0001345689999999999999999999
Q ss_pred HHHHHHHHcCCceEEEEeCCCccccc-------cccCh---HHHHHHHHHHHHHHH
Q 040744 388 SFIEEQRKAGREVRACNFVSTPHVDH-------FRNDP---KLYTTQLSQFLEDYV 433 (440)
Q Consensus 388 ~~~e~~r~~G~~V~~~~F~~S~HV~H-------~R~~P---eeY~~aV~~FL~~~~ 433 (440)
.+.++.+++|.+++.+.|.+..|-=. ...++ ++=|+++.+|+++..
T Consensus 179 ~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 179 ALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred HHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 99999999988899999999877544 33333 444777888877654
No 61
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.50 E-value=1.7e-06 Score=84.57 Aligned_cols=187 Identities=15% Similarity=0.228 Sum_probs=113.5
Q ss_pred CCeEEEEeeecCCchhhHHHHHHHHHHC----CCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhc---CCcE
Q 040744 164 SRTVVVLLGWLGAKQKHLRKYAEWYTSK----GFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDE---GKNL 236 (440)
Q Consensus 164 ~~plVVLlGW~GA~~khl~KYa~iY~~~----G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~---~~~I 236 (440)
..+++..||= |.+ +..=.+.|..+ ++|++.|++.-.. .+.|...|+...+=++++-++++++ ..+|
T Consensus 60 ~~~lly~hGN--a~D--lgq~~~~~~~l~~~ln~nv~~~DYSGyG---~S~G~psE~n~y~Di~avye~Lr~~~g~~~~I 132 (258)
T KOG1552|consen 60 HPTLLYSHGN--AAD--LGQMVELFKELSIFLNCNVVSYDYSGYG---RSSGKPSERNLYADIKAVYEWLRNRYGSPERI 132 (258)
T ss_pred ceEEEEcCCc--ccc--hHHHHHHHHHHhhcccceEEEEeccccc---ccCCCcccccchhhHHHHHHHHHhhcCCCceE
Confidence 4677778883 333 33444555544 8899999886321 1233222222222223333555554 4899
Q ss_pred EEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhhhhhhHHhhccccccccccccccccchhhhh
Q 040744 237 VFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWASGFSAAFLKKNSVATKGIVYTNELETDELV 316 (440)
Q Consensus 237 l~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~gfsaa~l~~~s~~~~~~~~~~~~~l~~~v 316 (440)
++.|+|||...+ ++ |..+ .++.|+|++|...+. .... ..
T Consensus 133 il~G~SiGt~~t----v~-Lasr-----~~~~alVL~SPf~S~---------~rv~-~~--------------------- 171 (258)
T KOG1552|consen 133 ILYGQSIGTVPT----VD-LASR-----YPLAAVVLHSPFTSG---------MRVA-FP--------------------- 171 (258)
T ss_pred EEEEecCCchhh----hh-Hhhc-----CCcceEEEeccchhh---------hhhh-cc---------------------
Confidence 999999999874 22 2222 238999999966442 1111 00
Q ss_pred ccccCCCCCchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcccCCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHc
Q 040744 317 GSRASGEPKPAVTETALLVVLEKFFEVILHLPAVNRRLSDVLGLLSSGQPACPQLYIYSSADRVIPAESVESFIEEQRKA 396 (440)
Q Consensus 317 ~~~~~~~p~~~~~~~~ll~~l~~~f~~~~~~p~~~~rl~~~~~~l~~~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~ 396 (440)
. .+ +. .+|..+.+ + .+ -+..+||+|+|||++|++||+..-.+++|.++++
T Consensus 172 -~-~~---~~------------~~~d~f~~---i----~k------I~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~ 221 (258)
T KOG1552|consen 172 -D-TK---TT------------YCFDAFPN---I----EK------ISKITCPVLIIHGTDDEVVDFSHGKALYERCKEK 221 (258)
T ss_pred -C-cc---eE------------Eeeccccc---c----Cc------ceeccCCEEEEecccCceecccccHHHHHhcccc
Confidence 0 00 00 00111111 1 01 1234689999999999999999999999998765
Q ss_pred CCceEEEEeCCCccccccccChHHHHHHHHHHHHHHH
Q 040744 397 GREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDYV 433 (440)
Q Consensus 397 G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~~ 433 (440)
++-....|+.|++..+ ..+|...+.+|+....
T Consensus 222 ---~epl~v~g~gH~~~~~--~~~yi~~l~~f~~~~~ 253 (258)
T KOG1552|consen 222 ---VEPLWVKGAGHNDIEL--YPEYIEHLRRFISSVL 253 (258)
T ss_pred ---CCCcEEecCCCccccc--CHHHHHHHHHHHHHhc
Confidence 5666678999998765 3569999999987654
No 62
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.48 E-value=9.3e-06 Score=83.81 Aligned_cols=72 Identities=17% Similarity=0.202 Sum_probs=60.3
Q ss_pred CCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEe-CCCccccccccChHHHHHHHHHHHHHHHhhh
Q 040744 364 GQPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNF-VSTPHVDHFRNDPKLYTTQLSQFLEDYVVTC 436 (440)
Q Consensus 364 ~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F-~~S~HV~H~R~~PeeY~~aV~~FL~~~~~~~ 436 (440)
...++|.|+|+|+.|.++|.+..+++.+.....+..++...+ ++++|..++ .+|+++.+.|.+||+++...|
T Consensus 306 ~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~l-e~p~~~~~~L~~FL~~~~~~~ 378 (379)
T PRK00175 306 ARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFL-LDDPRYGRLVRAFLERAARER 378 (379)
T ss_pred hcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHh-cCHHHHHHHHHHHHHhhhhcc
Confidence 345789999999999999999999998877665556676666 499999776 899999999999999987654
No 63
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=98.47 E-value=1.7e-05 Score=82.59 Aligned_cols=60 Identities=15% Similarity=0.122 Sum_probs=51.8
Q ss_pred CCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHH
Q 040744 365 QPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLE 430 (440)
Q Consensus 365 ~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~ 430 (440)
+.++|.|+|+|+.|.+++.+..+++++.. ..+...++++.|.-|. .+|++..+.|.+|++
T Consensus 323 ~i~vPvLiI~G~~D~~v~~~~~~~~a~~~-----~a~l~vIp~aGH~~~~-E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 323 NWKTPITVCWGLRDRWLNYDGVEDFCKSS-----QHKLIELPMAGHHVQE-DCGEELGGIISGILS 382 (383)
T ss_pred cCCCCEEEEeeCCCCCcCHHHHHHHHHhc-----CCeEEEECCCCCCcch-hCHHHHHHHHHHHhh
Confidence 45789999999999999999888877642 3467889999998888 799999999999986
No 64
>PRK10162 acetyl esterase; Provisional
Probab=98.46 E-value=2.3e-05 Score=79.19 Aligned_cols=223 Identities=16% Similarity=0.145 Sum_probs=117.9
Q ss_pred CCeEEEEee--ec-CCchhhHHHHHHHHH-HCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhh---cCCcE
Q 040744 164 SRTVVVLLG--WL-GAKQKHLRKYAEWYT-SKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLED---EGKNL 236 (440)
Q Consensus 164 ~~plVVLlG--W~-GA~~khl~KYa~iY~-~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~---~~~~I 236 (440)
.+.||.+|| |. |.... -......+. ..|+.|+.++++.+.--.+.. .-.++..+++++.+..++ +..+|
T Consensus 81 ~p~vv~~HGGg~~~g~~~~-~~~~~~~la~~~g~~Vv~vdYrlape~~~p~---~~~D~~~a~~~l~~~~~~~~~d~~~i 156 (318)
T PRK10162 81 QATLFYLHGGGFILGNLDT-HDRIMRLLASYSGCTVIGIDYTLSPEARFPQ---AIEEIVAVCCYFHQHAEDYGINMSRI 156 (318)
T ss_pred CCEEEEEeCCcccCCCchh-hhHHHHHHHHHcCCEEEEecCCCCCCCCCCC---cHHHHHHHHHHHHHhHHHhCCChhHE
Confidence 356888999 44 44432 233444443 469999999998642111111 112233444454432222 25699
Q ss_pred EEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhhhhhhHHhhccccccccccccccccchhhhh
Q 040744 237 VFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWASGFSAAFLKKNSVATKGIVYTNELETDELV 316 (440)
Q Consensus 237 l~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~gfsaa~l~~~s~~~~~~~~~~~~~l~~~v 316 (440)
++-|.|+||.+++...+. ++... .....++|+|+-++..+..+.. +....
T Consensus 157 ~l~G~SaGG~la~~~a~~-~~~~~-~~~~~~~~~vl~~p~~~~~~~~------s~~~~---------------------- 206 (318)
T PRK10162 157 GFAGDSAGAMLALASALW-LRDKQ-IDCGKVAGVLLWYGLYGLRDSV------SRRLL---------------------- 206 (318)
T ss_pred EEEEECHHHHHHHHHHHH-HHhcC-CCccChhheEEECCccCCCCCh------hHHHh----------------------
Confidence 999999999988654332 22221 1125788999888654431100 00000
Q ss_pred ccccCCCCCchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhc-ccC-CCCCCEEEEEcCCCCccCHHHHHHHHHHHH
Q 040744 317 GSRASGEPKPAVTETALLVVLEKFFEVILHLPAVNRRLSDVLGLL-SSG-QPACPQLYIYSSADRVIPAESVESFIEEQR 394 (440)
Q Consensus 317 ~~~~~~~p~~~~~~~~ll~~l~~~f~~~~~~p~~~~rl~~~~~~l-~~~-~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r 394 (440)
+... ..+.. ..+.++....+.-+ ..+...+...+ ..- ..--|.++++++.|.+. ++.+++++..+
T Consensus 207 ~~~~-----~~l~~----~~~~~~~~~y~~~~--~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~--de~~~~~~~L~ 273 (318)
T PRK10162 207 GGVW-----DGLTQ----QDLQMYEEAYLSND--ADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLL--DDSRLLYQTLA 273 (318)
T ss_pred CCCc-----cccCH----HHHHHHHHHhCCCc--cccCCcccCcchhhhhcCCCCeEEEecCCCcCc--ChHHHHHHHHH
Confidence 0000 00000 01111221111110 00000000000 000 11248899999999997 58999999999
Q ss_pred HcCCceEEEEeCCCccccccccC----hHHHHHHHHHHHHHHH
Q 040744 395 KAGREVRACNFVSTPHVDHFRND----PKLYTTQLSQFLEDYV 433 (440)
Q Consensus 395 ~~G~~V~~~~F~~S~HV~H~R~~----PeeY~~aV~~FL~~~~ 433 (440)
+.|.+|+...++|..|.-..... -++-++.+.+|+++..
T Consensus 274 ~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~ 316 (318)
T PRK10162 274 AHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQL 316 (318)
T ss_pred HcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHh
Confidence 99999999999999997544332 2344555666776653
No 65
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.37 E-value=2e-05 Score=78.78 Aligned_cols=66 Identities=11% Similarity=0.163 Sum_probs=53.5
Q ss_pred CCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCcccccccc---ChHHHHHHHHHHHHH
Q 040744 364 GQPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRN---DPKLYTTQLSQFLED 431 (440)
Q Consensus 364 ~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~---~PeeY~~aV~~FL~~ 431 (440)
.+...|-|.+||++|.++..+-.++++|.|..+ |++...++|.=|.-|.-. +-+.+..-|.++|++
T Consensus 243 ~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~--DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 243 NEVTVPFLILHGTDDKVTDPKVSKELYEKASSS--DKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDE 311 (313)
T ss_pred ccccccEEEEecCCCcccCcHHHHHHHHhccCC--CCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHh
Confidence 345679999999999999999999999988765 788999999999999633 345566666666654
No 66
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.37 E-value=1.2e-05 Score=81.10 Aligned_cols=240 Identities=19% Similarity=0.199 Sum_probs=127.9
Q ss_pred CCCCeEEEEeeecCCchhhHHHHHH-HHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhh--cCCcEEE
Q 040744 162 MKSRTVVVLLGWLGAKQKHLRKYAE-WYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLED--EGKNLVF 238 (440)
Q Consensus 162 ~~~~plVVLlGW~GA~~khl~KYa~-iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~--~~~~Il~ 238 (440)
...+|+|++||-.|++ ++-.-.++ +=++.|..+..++.+.........+...+...+++...| +.... ...++++
T Consensus 50 ~~~Pp~i~lHGl~GS~-~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi-~~v~~~~~~~~~~l 127 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSK-ENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFI-DGVGGSTRLDPVVL 127 (315)
T ss_pred CCCCceEEecccccCC-CCHHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHH-HHcccccccCCcee
Confidence 5678999999999988 56655543 446678889888887632211111111112223333222 22222 2679999
Q ss_pred EEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhhhhhhHHhhccccccccccccccccchhhhhcc
Q 040744 239 HTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWASGFSAAFLKKNSVATKGIVYTNELETDELVGS 318 (440)
Q Consensus 239 H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~gfsaa~l~~~s~~~~~~~~~~~~~l~~~v~~ 318 (440)
+|+|||| .. .++.+.+.. +. ...+.+|.|.+|+...+.. |-..++++..- ......++
T Consensus 128 ~GHsmGG-~~-~~m~~t~~~--p~--~~~rliv~D~sP~~~~~~~----~e~~e~i~~m~------~~d~~~~~------ 185 (315)
T KOG2382|consen 128 LGHSMGG-VK-VAMAETLKK--PD--LIERLIVEDISPGGVGRSY----GEYRELIKAMI------QLDLSIGV------ 185 (315)
T ss_pred cccCcch-HH-HHHHHHHhc--Cc--ccceeEEEecCCccCCccc----chHHHHHHHHH------hccccccc------
Confidence 9999999 22 223333332 22 3568899999996432221 11122221100 00000000
Q ss_pred ccCCCCCchHHH--HHHHH-HHHHHHHHHh-------------hhhhhhhhhh-----hhhhhcccCCCCCCEEEEEcCC
Q 040744 319 RASGEPKPAVTE--TALLV-VLEKFFEVIL-------------HLPAVNRRLS-----DVLGLLSSGQPACPQLYIYSSA 377 (440)
Q Consensus 319 ~~~~~p~~~~~~--~~ll~-~l~~~f~~~~-------------~~p~~~~rl~-----~~~~~l~~~~~~~P~LYIYS~a 377 (440)
...++..... .+... .+..|+..-+ +...+.+-+. .++..+...+...|.|||.+..
T Consensus 186 --~~~rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~ 263 (315)
T KOG2382|consen 186 --SRGRKEALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQ 263 (315)
T ss_pred --cccHHHHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCC
Confidence 0000100000 00000 0001110000 1111111111 1222333355677999999999
Q ss_pred CCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHHH
Q 040744 378 DRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDY 432 (440)
Q Consensus 378 D~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~ 432 (440)
+.+||.+.-.++..... .++...+++++|.=|+ +.|++..+.|.+|++.+
T Consensus 264 S~fv~~~~~~~~~~~fp----~~e~~~ld~aGHwVh~-E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 264 SKFVPDEHYPRMEKIFP----NVEVHELDEAGHWVHL-EKPEEFIESISEFLEEP 313 (315)
T ss_pred CCCcChhHHHHHHHhcc----chheeecccCCceeec-CCHHHHHHHHHHHhccc
Confidence 99999987766665433 2778888999999987 67999999999998764
No 67
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.33 E-value=5.6e-05 Score=70.46 Aligned_cols=205 Identities=20% Similarity=0.259 Sum_probs=100.6
Q ss_pred EEEEee--ecCCchhhHHHHHHH-HHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHh---hhcCCcEEEEE
Q 040744 167 VVVLLG--WLGAKQKHLRKYAEW-YTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCL---EDEGKNLVFHT 240 (440)
Q Consensus 167 lVVLlG--W~GA~~khl~KYa~i-Y~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l---~~~~~~Il~H~ 240 (440)
||.+|| |.....+....+.+. ..+.|+.|+.++++...-. .. ...-.++...++++.+-. ..+..+|++-|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~--~~-p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G 77 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEA--PF-PAALEDVKAAYRWLLKNADKLGIDPERIVLIG 77 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTS--ST-THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccc--cc-cccccccccceeeeccccccccccccceEEee
Confidence 466775 543333334555444 4469999999999864211 01 111222333334433221 11267999999
Q ss_pred ecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhhhhhhHHhhccccccccccccccccchhhhhcccc
Q 040744 241 FSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWASGFSAAFLKKNSVATKGIVYTNELETDELVGSRA 320 (440)
Q Consensus 241 FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~gfsaa~l~~~s~~~~~~~~~~~~~l~~~v~~~~ 320 (440)
.|-||.+++...+...... ...++++|+=|+..+..+.. + ....... ....
T Consensus 78 ~SAGg~la~~~~~~~~~~~----~~~~~~~~~~~p~~d~~~~~----~--~~~~~~~-----------------~~~~-- 128 (211)
T PF07859_consen 78 DSAGGHLALSLALRARDRG----LPKPKGIILISPWTDLQDFD----G--PSYDDSN-----------------ENKD-- 128 (211)
T ss_dssp ETHHHHHHHHHHHHHHHTT----TCHESEEEEESCHSSTSTSS----C--HHHHHHH-----------------HHST--
T ss_pred cccccchhhhhhhhhhhhc----ccchhhhhcccccccchhcc----c--ccccccc-----------------cccc--
Confidence 9999998865554433321 13488888888654320000 0 0000000 0000
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcccCCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCce
Q 040744 321 SGEPKPAVTETALLVVLEKFFEVILHLPAVNRRLSDVLGLLSSGQPACPQLYIYSSADRVIPAESVESFIEEQRKAGREV 400 (440)
Q Consensus 321 ~~~p~~~~~~~~ll~~l~~~f~~~~~~p~~~~rl~~~~~~l~~~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V 400 (440)
.+.+... .+..++.....-............. .....-.|.++++|+.|.++ ++.++++++.+++|.+|
T Consensus 129 ----~~~~~~~----~~~~~~~~~~~~~~~~~~~~sp~~~-~~~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v 197 (211)
T PF07859_consen 129 ----DPFLPAP----KIDWFWKLYLPGSDRDDPLASPLNA-SDLKGLPPTLIIHGEDDVLV--DDSLRFAEKLKKAGVDV 197 (211)
T ss_dssp ----TSSSBHH----HHHHHHHHHHSTGGTTSTTTSGGGS-SCCTTCHEEEEEEETTSTTH--HHHHHHHHHHHHTT-EE
T ss_pred ----ccccccc----ccccccccccccccccccccccccc-cccccCCCeeeeccccccch--HHHHHHHHHHHHCCCCE
Confidence 0000010 1122222222100010111111111 01112237788999999886 57899999999999999
Q ss_pred EEEEeCCCcccccc
Q 040744 401 RACNFVSTPHVDHF 414 (440)
Q Consensus 401 ~~~~F~~S~HV~H~ 414 (440)
+...+++.+|+=.|
T Consensus 198 ~~~~~~g~~H~f~~ 211 (211)
T PF07859_consen 198 ELHVYPGMPHGFFM 211 (211)
T ss_dssp EEEEETTEETTGGG
T ss_pred EEEEECCCeEEeeC
Confidence 99999999997543
No 68
>PRK07581 hypothetical protein; Validated
Probab=98.28 E-value=2.8e-05 Score=78.36 Aligned_cols=64 Identities=14% Similarity=0.104 Sum_probs=52.9
Q ss_pred CCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCC-CccccccccChHHHHHHHHHHHHHHH
Q 040744 365 QPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVS-TPHVDHFRNDPKLYTTQLSQFLEDYV 433 (440)
Q Consensus 365 ~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~-S~HV~H~R~~PeeY~~aV~~FL~~~~ 433 (440)
+.++|.|+|+|+.|.++|.+..+.+.+.. . ..+.+.+++ ++|..++ ..|+++.+.|.+|+++..
T Consensus 273 ~I~~PtLvI~G~~D~~~p~~~~~~l~~~i--p--~a~l~~i~~~~GH~~~~-~~~~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 273 SITAKTFVMPISTDLYFPPEDCEAEAALI--P--NAELRPIESIWGHLAGF-GQNPADIAFIDAALKELL 337 (339)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHhC--C--CCeEEEeCCCCCccccc-cCcHHHHHHHHHHHHHHH
Confidence 35789999999999999999888776543 2 256778898 8998876 778889999999999875
No 69
>COG0400 Predicted esterase [General function prediction only]
Probab=98.23 E-value=3.5e-05 Score=73.74 Aligned_cols=60 Identities=20% Similarity=0.241 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHHH
Q 040744 367 ACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDY 432 (440)
Q Consensus 367 ~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~ 432 (440)
..|+|.+||+.|++||....++..+..++.|.+|+.+.++ .+|- ..++++ +++.+||.++
T Consensus 146 ~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~----i~~e~~-~~~~~wl~~~ 205 (207)
T COG0400 146 GTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHE----IPPEEL-EAARSWLANT 205 (207)
T ss_pred CCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCc----CCHHHH-HHHHHHHHhc
Confidence 4699999999999999999999999999999999999887 6663 234444 6777788764
No 70
>PLN02872 triacylglycerol lipase
Probab=98.23 E-value=3.3e-05 Score=80.73 Aligned_cols=66 Identities=15% Similarity=0.179 Sum_probs=52.8
Q ss_pred CCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCcccccc--ccChHHHHHHHHHHHHHHHh
Q 040744 366 PACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHF--RNDPKLYTTQLSQFLEDYVV 434 (440)
Q Consensus 366 ~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~--R~~PeeY~~aV~~FL~~~~~ 434 (440)
.++|.+.+||+.|.+++.++++++.+.... .++...+++..|..++ ...|++-.+.|.+|+++...
T Consensus 324 ~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~---~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~ 391 (395)
T PLN02872 324 KSLPLWMGYGGTDGLADVTDVEHTLAELPS---KPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGK 391 (395)
T ss_pred CCccEEEEEcCCCCCCCHHHHHHHHHHCCC---ccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhh
Confidence 357999999999999999999999876432 2467778999998554 56688888999999986543
No 71
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=98.17 E-value=2.6e-05 Score=81.34 Aligned_cols=108 Identities=18% Similarity=0.209 Sum_probs=60.1
Q ss_pred CCCeEEEEeeecCCchhh-HHHHHHHHHHCCCeEEEEecCCCceeecccc--hhhhHHHHHHHHHHHHHhhhcCCcEEEE
Q 040744 163 KSRTVVVLLGWLGAKQKH-LRKYAEWYTSKGFHVITFTFPMAEILSYQVG--GKAEQNIELLVNHLADCLEDEGKNLVFH 239 (440)
Q Consensus 163 ~~~plVVLlGW~GA~~kh-l~KYa~iY~~~G~nVL~~~~p~~~il~~~~g--~k~~k~l~~l~~~i~~~l~~~~~~Il~H 239 (440)
+..|+||++|=+++-... ...|.+.+..+|+.+|+++.|--.. +..+. ...++..+.++++|.+.=.-+..+|.+.
T Consensus 188 ~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~-s~~~~l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~ 266 (411)
T PF06500_consen 188 KPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGE-SPKWPLTQDSSRLHQAVLDYLASRPWVDHTRVGAW 266 (411)
T ss_dssp S-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGG-GTTT-S-S-CCHHHHHHHHHHHHSTTEEEEEEEEE
T ss_pred CCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcc-cccCCCCcCHHHHHHHHHHHHhcCCccChhheEEE
Confidence 346888888866655544 5566777899999999999985211 11111 1122334555555543212236799999
Q ss_pred EecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCC
Q 040744 240 TFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVAS 279 (440)
Q Consensus 240 ~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~ 279 (440)
|||+||..+.+ .+..+ ..+|||+|.-.+++..
T Consensus 267 G~SfGGy~AvR---lA~le-----~~RlkavV~~Ga~vh~ 298 (411)
T PF06500_consen 267 GFSFGGYYAVR---LAALE-----DPRLKAVVALGAPVHH 298 (411)
T ss_dssp EETHHHHHHHH---HHHHT-----TTT-SEEEEES---SC
T ss_pred EeccchHHHHH---HHHhc-----ccceeeEeeeCchHhh
Confidence 99999997632 12222 2589999999988763
No 72
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=98.12 E-value=8.4e-05 Score=70.23 Aligned_cols=107 Identities=10% Similarity=0.040 Sum_probs=59.5
Q ss_pred CCCeEEEEeeecCCchhhHH--HHHHHHHHCCCeEEEEecCCCce----ee-ccc-----chhhhHHHHHHHHHHHHHhh
Q 040744 163 KSRTVVVLLGWLGAKQKHLR--KYAEWYTSKGFHVITFTFPMAEI----LS-YQV-----GGKAEQNIELLVNHLADCLE 230 (440)
Q Consensus 163 ~~~plVVLlGW~GA~~khl~--KYa~iY~~~G~nVL~~~~p~~~i----l~-~~~-----g~k~~k~l~~l~~~i~~~l~ 230 (440)
+.+.||++||+.+....... .+.+.-.+.||.|+.++.+-... .. +.. +......+..+++++.+...
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 44678999999886543321 24555567899999987764211 00 000 01112233444444432211
Q ss_pred hcCCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCC
Q 040744 231 DEGKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPV 277 (440)
Q Consensus 231 ~~~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg 277 (440)
.+..+|.+-||||||.+++... +. . ++.+.++|.=|++.
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a---~~--~---p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLG---CT--Y---PDVFAGGASNAGLP 130 (212)
T ss_pred cChhheEEEEECHHHHHHHHHH---Hh--C---chhheEEEeecCCc
Confidence 2257999999999999874322 11 1 24566766555443
No 73
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.08 E-value=0.00026 Score=79.94 Aligned_cols=71 Identities=8% Similarity=0.074 Sum_probs=59.2
Q ss_pred CCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHHHHhh
Q 040744 364 GQPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDYVVT 435 (440)
Q Consensus 364 ~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~~~~ 435 (440)
...++|.|+|||..|..++.+.+.++++..+++|.+++.+.. ...|+......+.+|.+.+.+|+.+.+..
T Consensus 452 ~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~-~g~H~~~~~~~~~d~~e~~~~Wfd~~LkG 522 (767)
T PRK05371 452 DKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLH-QGGHVYPNNWQSIDFRDTMNAWFTHKLLG 522 (767)
T ss_pred hCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEe-CCCccCCCchhHHHHHHHHHHHHHhcccc
Confidence 356799999999999999999999999998888888777655 45687666666789999999999887654
No 74
>PRK10115 protease 2; Provisional
Probab=98.07 E-value=0.00017 Score=80.52 Aligned_cols=239 Identities=15% Similarity=0.073 Sum_probs=133.0
Q ss_pred eeecCCCCccccCCC----CC-cCCCCCCeEEEEeeecCCch-hhHHHHHHHHHHCCCeEEEEecCCCceeeccc---ch
Q 040744 142 RWHLPETDAIDVSGT----SD-CLAMKSRTVVVLLGWLGAKQ-KHLRKYAEWYTSKGFHVITFTFPMAEILSYQV---GG 212 (440)
Q Consensus 142 ~~~~p~~~~~~~~~~----~~-~~~~~~~plVVLlGW~GA~~-khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~---g~ 212 (440)
++.+++.++..++.. .+ ...++.|.|+.+||=-|... .........+.++||.|+....+-+..++..+ |.
T Consensus 418 ~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~ 497 (686)
T PRK10115 418 HLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGK 497 (686)
T ss_pred EEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhh
Confidence 667777776543321 11 11234466666777333332 22344456789999999999887654443222 11
Q ss_pred --hhhHHHHHHHHHHHHHhhhc---CCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhhh
Q 040744 213 --KAEQNIELLVNHLADCLEDE---GKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWAS 287 (440)
Q Consensus 213 --k~~k~l~~l~~~i~~~l~~~---~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~ 287 (440)
......+++++.+...+++. +.+|.+.|-|+||.++...+ .+. ++..++.|...+..+..
T Consensus 498 ~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~-----~~~---Pdlf~A~v~~vp~~D~~------- 562 (686)
T PRK10115 498 FLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAI-----NQR---PELFHGVIAQVPFVDVV------- 562 (686)
T ss_pred hhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHH-----hcC---hhheeEEEecCCchhHh-------
Confidence 11234566666654344444 78999999999999874322 222 35678888888666531
Q ss_pred hhhHHhhccccccccccccccccchhhhhccccCCCCCchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcccCCCC
Q 040744 288 GFSAAFLKKNSVATKGIVYTNELETDELVGSRASGEPKPAVTETALLVVLEKFFEVILHLPAVNRRLSDVLGLLSSGQPA 367 (440)
Q Consensus 288 gfsaa~l~~~s~~~~~~~~~~~~~l~~~v~~~~~~~p~~~~~~~~ll~~l~~~f~~~~~~p~~~~rl~~~~~~l~~~~~~ 367 (440)
.++.... .+... .... ..|. |.-+ . .+..+. . ..++..+ .+.+
T Consensus 563 ----~~~~~~~---~p~~~---~~~~-e~G~-----p~~~--~---------~~~~l~-------~-~SP~~~v--~~~~ 605 (686)
T PRK10115 563 ----TTMLDES---IPLTT---GEFE-EWGN-----PQDP--Q---------YYEYMK-------S-YSPYDNV--TAQA 605 (686)
T ss_pred ----hhcccCC---CCCCh---hHHH-HhCC-----CCCH--H---------HHHHHH-------H-cCchhcc--CccC
Confidence 0110000 00000 0000 0010 1100 0 000000 0 0112222 2236
Q ss_pred CCE-EEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEe---CCCccccccccChHHHHHHH---HHHHHHHHh
Q 040744 368 CPQ-LYIYSSADRVIPAESVESFIEEQRKAGREVRACNF---VSTPHVDHFRNDPKLYTTQL---SQFLEDYVV 434 (440)
Q Consensus 368 ~P~-LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F---~~S~HV~H~R~~PeeY~~aV---~~FL~~~~~ 434 (440)
.|. |+++|..|.-||+.+.++++++.|++|.+++...+ .+++|- ...+..++++.. ..|+-+.+.
T Consensus 606 ~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg--~~~~r~~~~~~~A~~~aFl~~~~~ 677 (686)
T PRK10115 606 YPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHG--GKSGRFKSYEGVAMEYAFLIALAQ 677 (686)
T ss_pred CCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCC--CCcCHHHHHHHHHHHHHHHHHHhC
Confidence 785 56699999999999999999999999999888888 888887 455555555554 456655543
No 75
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.05 E-value=0.00018 Score=77.94 Aligned_cols=112 Identities=12% Similarity=0.131 Sum_probs=64.2
Q ss_pred CCCeEEEEeeecCCchhhH-----HHHHHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhc-CCcE
Q 040744 163 KSRTVVVLLGWLGAKQKHL-----RKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDE-GKNL 236 (440)
Q Consensus 163 ~~~plVVLlGW~GA~~khl-----~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~-~~~I 236 (440)
..+||+|++||.+ +..-+ .-.++.+.++||+|++++.+.-..-....+. .+...+.+.+.|..+.+.. ..++
T Consensus 187 ~~~PlLiVp~~i~-k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~-ddY~~~~i~~al~~v~~~~g~~kv 264 (532)
T TIGR01838 187 HKTPLLIVPPWIN-KYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTF-DDYIRDGVIAALEVVEAITGEKQV 264 (532)
T ss_pred CCCcEEEECcccc-cceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCCh-hhhHHHHHHHHHHHHHHhcCCCCe
Confidence 4589999999975 43323 1467888899999999987642211000110 0111122333333222222 6789
Q ss_pred EEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCC
Q 040744 237 VFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVAS 279 (440)
Q Consensus 237 l~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~ 279 (440)
.+.|+||||.++...+.. +.... ..++|+++|+=.+|.+.
T Consensus 265 ~lvG~cmGGtl~a~ala~-~aa~~--~~~rv~slvll~t~~Df 304 (532)
T TIGR01838 265 NCVGYCIGGTLLSTALAY-LAARG--DDKRIKSATFFTTLLDF 304 (532)
T ss_pred EEEEECcCcHHHHHHHHH-HHHhC--CCCccceEEEEecCcCC
Confidence 999999999975432321 22211 12468888877777664
No 76
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.04 E-value=0.00016 Score=83.78 Aligned_cols=66 Identities=11% Similarity=0.165 Sum_probs=53.2
Q ss_pred CCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEE-EEeCCCccccccccC--hHHHHHHHHHHHHHHH
Q 040744 364 GQPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRA-CNFVSTPHVDHFRND--PKLYTTQLSQFLEDYV 433 (440)
Q Consensus 364 ~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~-~~F~~S~HV~H~R~~--PeeY~~aV~~FL~~~~ 433 (440)
...++|.|+|+|+.|.++|.+.++.+.+.. .+ .+. +.+++++|.+++-.- |++=|..+.+||++..
T Consensus 294 ~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i--~~--a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~ 362 (994)
T PRK07868 294 ADITCPVLAFVGEVDDIGQPASVRGIRRAA--PN--AEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLE 362 (994)
T ss_pred hhCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CC--CeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhc
Confidence 456789999999999999999999997643 22 233 567899999988764 7889999999998754
No 77
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.92 E-value=0.0001 Score=73.18 Aligned_cols=106 Identities=10% Similarity=0.043 Sum_probs=64.3
Q ss_pred CCeEEEEeeecCC---chhhHHHHHHHHHHCCCeEEEEecCCCcee-ecccchhhhHHHHHHHHHHHHHhhhc-CCcEEE
Q 040744 164 SRTVVVLLGWLGA---KQKHLRKYAEWYTSKGFHVITFTFPMAEIL-SYQVGGKAEQNIELLVNHLADCLEDE-GKNLVF 238 (440)
Q Consensus 164 ~~plVVLlGW~GA---~~khl~KYa~iY~~~G~nVL~~~~p~~~il-~~~~g~k~~k~l~~l~~~i~~~l~~~-~~~Il~ 238 (440)
.++||++|||++. ..+...++++.+.+.||+|+++++|-..-- ........+..++++...+ +++++. ..+|++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai-~~L~~~~~~~v~L 103 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAY-RWLIEQGHPPVTL 103 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHH-HHHHhcCCCCEEE
Confidence 3678899999762 223466778888899999999999842100 0000011112233333222 344443 579999
Q ss_pred EEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCC
Q 040744 239 HTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVA 278 (440)
Q Consensus 239 H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~ 278 (440)
.|+||||..+... +. +. ++.++++|+-++...
T Consensus 104 vG~SmGG~vAl~~---A~--~~---p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 104 WGLRLGALLALDA---AN--PL---AAKCNRLVLWQPVVS 135 (266)
T ss_pred EEECHHHHHHHHH---HH--hC---ccccceEEEeccccc
Confidence 9999999986421 11 11 257889999985544
No 78
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.84 E-value=0.0023 Score=65.36 Aligned_cols=106 Identities=12% Similarity=0.061 Sum_probs=62.6
Q ss_pred CCCCeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCceee-cccchhhhHHHHHHHHHHHHHhhhc-CCcEEEE
Q 040744 162 MKSRTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILS-YQVGGKAEQNIELLVNHLADCLEDE-GKNLVFH 239 (440)
Q Consensus 162 ~~~~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~-~~~g~k~~k~l~~l~~~i~~~l~~~-~~~Il~H 239 (440)
....|+|++||+++..---..-|-.+=. ..+|-.+|.|--.--+ +.+....+...+..++-|.+|-+.. -...++-
T Consensus 88 ~~~~plVliHGyGAg~g~f~~Nf~~La~--~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~Kmilv 165 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLGLFFRNFDDLAK--IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILV 165 (365)
T ss_pred cCCCcEEEEeccchhHHHHHHhhhhhhh--cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEe
Confidence 5568999999999855433333333222 7788888876311111 1111111222235667777775444 5688899
Q ss_pred EecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCC
Q 040744 240 TFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPV 277 (440)
Q Consensus 240 ~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg 277 (440)
|.|+||+++..+.+. + +++|+-+|+=|.-|
T Consensus 166 GHSfGGYLaa~YAlK-----y---PerV~kLiLvsP~G 195 (365)
T KOG4409|consen 166 GHSFGGYLAAKYALK-----Y---PERVEKLILVSPWG 195 (365)
T ss_pred eccchHHHHHHHHHh-----C---hHhhceEEEecccc
Confidence 999999987543322 2 46787777766444
No 79
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.80 E-value=0.0017 Score=58.68 Aligned_cols=63 Identities=25% Similarity=0.426 Sum_probs=45.3
Q ss_pred CCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHH
Q 040744 364 GQPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLE 430 (440)
Q Consensus 364 ~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~ 430 (440)
....+|.|+|+|..|.+.|.+..+...+..+ + ..+...++++.|.-|... |+++++.+.+|++
T Consensus 218 ~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~--~-~~~~~~~~~~gH~~~~~~-p~~~~~~i~~~~~ 280 (282)
T COG0596 218 ARITVPTLIIHGEDDPVVPAELARRLAAALP--N-DARLVVIPGAGHFPHLEA-PEAFAAALLAFLE 280 (282)
T ss_pred ccCCCCeEEEecCCCCcCCHHHHHHHHhhCC--C-CceEEEeCCCCCcchhhc-HHHHHHHHHHHHh
Confidence 3456899999999998888877444443222 1 467888999999988754 5578888877543
No 80
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.74 E-value=4.3e-06 Score=85.51 Aligned_cols=277 Identities=19% Similarity=0.135 Sum_probs=167.9
Q ss_pred cchhhHHHHHHHHHHhhccccccccCCCcCCCCCCC---ccccccccCccccccceeeccccccccCCccceeecccCCC
Q 040744 7 IIQRPLIAAAAVAVASASADVSDKFQSFTSPGAEQT---DSSVSVSNSIQEFTSSWVSHISVSKLSSLNFVTRVQVPVPS 83 (440)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (440)
+||+++.+....--+.++.|.+|+......-..+++ +.-..+.-..++.. |++.-+.+......++-|++.|+|+
T Consensus 1 ~Iq~~~~~~~~~~~~k~s~~~~~~~~~~~~~~~g~~s~k~Iv~~~gWag~~~r--~l~ky~~~Yq~~g~~~~~~tap~~~ 78 (350)
T KOG2521|consen 1 IIQIRFHARRPVWTAKVSLEFSDIGNAAASKVNGGESEKPIVVLLGWAGAIDR--NLMKYSKIYQDKGYIVVRITAPCPS 78 (350)
T ss_pred CcccccccCcccceeeccHhhhhccccchhhhcCCCccccEEEEeeeccccch--hHHHHHHHHhcCCceEEEecCcccc
Confidence 356666677777778888888888887554423323 22223333333333 8888888899999999999999999
Q ss_pred cccccCCCCCCCCCCcccCcccchhhHHHHHHhHhhhccCCCCCCCCCCC-CCCCCCceeeecCCCCccccCCCCCcCCC
Q 040744 84 ISFGVPSSGHKFIPSNLCSSVASFPLLVNVYQSAELAKASKPTKTTGSIP-ASYSDVLYRWHLPETDAIDVSGTSDCLAM 162 (440)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~y~~~~p~~~~~~~~~~~~~~~~ 162 (440)
+.+...+ ..+.+...+..+..+.+.|++++.++... ....|| ..=....+++.-++|...++.+|-.+-..
T Consensus 79 ~~~~~s~-----~~~sl~~~~~~l~~L~~~~~~~~~pi~fh---~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~ 150 (350)
T KOG2521|consen 79 VFLSASR-----RILSLSLASTRLSELLSDYNSDPCPIIFH---VFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSA 150 (350)
T ss_pred ccccccc-----ccchhhHHHHHHHHHhhhccCCcCceEEE---EecCCceeehHHHHHHHhhcCchhHhhcCCceEecc
Confidence 9887766 55555555668888999999766665543 233344 22233445566666666666666666667
Q ss_pred CCCeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhc-CCcEEEEEe
Q 040744 163 KSRTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDE-GKNLVFHTF 241 (440)
Q Consensus 163 ~~~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~-~~~Il~H~F 241 (440)
+..+..+..+|......+..+|.+.|.+.++.+..++...-..-.+..|...++.-..+-....++++++ .....-|.+
T Consensus 151 p~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~ly 230 (350)
T KOG2521|consen 151 PARSSPVQLGWAVSFSSPPDDYVARWARLNYHITLLTMAGNEGGAYLLGPLAEKISMSRKYHFLDRYEEQRNELPWNQLY 230 (350)
T ss_pred ccccchhhhcceeccccCchhhHHHHHhcCeEEEEEEeeecccchhhhhhhhhccccccchHHHHHHHhhhhccccccee
Confidence 7889999999999888889999999999999887766543211112222222221111112233444443 444566666
Q ss_pred cccHH--HHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhhhhhhHHhhcccc
Q 040744 242 SNTGW--LTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWASGFSAAFLKKNS 298 (440)
Q Consensus 242 SnGG~--~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~gfsaa~l~~~s 298 (440)
+.++. ++-....+.+.+ ..+-+|+.++|..-.....-.+.++|..+++++..
T Consensus 231 ~~s~~d~v~~~~~ie~f~~-----~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~ 284 (350)
T KOG2521|consen 231 LYSDNDDVLPADEIEKFIA-----LRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCS 284 (350)
T ss_pred ecCCccccccHHHHHHHHH-----HHHhcCceEEEeeccCccceeeeccCcHHHHHHHH
Confidence 65443 332223333321 12345555555444433333456677777666544
No 81
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.69 E-value=0.0076 Score=60.42 Aligned_cols=67 Identities=19% Similarity=0.310 Sum_probs=54.5
Q ss_pred cCCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcC-CceEEEEeCCCccccccccChHHHHHHHHHHHHHHH
Q 040744 363 SGQPACPQLYIYSSADRVIPAESVESFIEEQRKAG-REVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDYV 433 (440)
Q Consensus 363 ~~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G-~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~~ 433 (440)
...+..|.++.||..|++||+...++.++.+.++| .+|+.....+..|.......-.+ ..+|+++.+
T Consensus 215 ~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~----a~~Wl~~rf 282 (290)
T PF03583_consen 215 DWTPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPD----ALAWLDDRF 282 (290)
T ss_pred CCCCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHH----HHHHHHHHH
Confidence 44567899999999999999999999999999999 79999999999999876555433 335555444
No 82
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=97.56 E-value=0.0029 Score=61.19 Aligned_cols=100 Identities=20% Similarity=0.220 Sum_probs=58.3
Q ss_pred CceeeecCCCCccccCCCCCcCCCCCCeEEEEeeecCCchhhHHH---HHHHHHHCCCeEEEEecCC----Cceee-cc-
Q 040744 139 VLYRWHLPETDAIDVSGTSDCLAMKSRTVVVLLGWLGAKQKHLRK---YAEWYTSKGFHVITFTFPM----AEILS-YQ- 209 (440)
Q Consensus 139 ~~y~~~~p~~~~~~~~~~~~~~~~~~~plVVLlGW~GA~~khl~K---Ya~iY~~~G~nVL~~~~p~----~~il~-~~- 209 (440)
+.|.+..|+.. +..+-+-||+|||..+.-+ .... +.++-.+.||-|+...... ..+.. +.
T Consensus 1 l~Y~lYvP~~~----------~~~~~PLVv~LHG~~~~a~-~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~ 69 (220)
T PF10503_consen 1 LSYRLYVPPGA----------PRGPVPLVVVLHGCGQSAE-DFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSD 69 (220)
T ss_pred CcEEEecCCCC----------CCCCCCEEEEeCCCCCCHH-HHHhhcCHHHHhhcCCeEEEcccccccCCCCCccccccc
Confidence 46888998732 1123356777999988654 4333 3556667899888765331 11111 11
Q ss_pred ---cchhhhHHHHHHHHHHHHHhhhcCCcEEEEEecccHHHHH
Q 040744 210 ---VGGKAEQNIELLVNHLADCLEDEGKNLVFHTFSNTGWLTY 249 (440)
Q Consensus 210 ---~g~k~~k~l~~l~~~i~~~l~~~~~~Il~H~FSnGG~~~~ 249 (440)
.|......+..|++++..-...+..+|++-||||||.|++
T Consensus 70 ~~~~g~~d~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~ 112 (220)
T PF10503_consen 70 DQQRGGGDVAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMAN 112 (220)
T ss_pred ccccCccchhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHH
Confidence 1111222344555555433334488999999999999874
No 83
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=97.55 E-value=0.0017 Score=61.77 Aligned_cols=169 Identities=15% Similarity=0.129 Sum_probs=81.2
Q ss_pred CCCeEEEEeeecCCchh---hHHHHHHHHHHCCCeEEEEecCCCc-----ee---------------ecccch-----hh
Q 040744 163 KSRTVVVLLGWLGAKQK---HLRKYAEWYTSKGFHVITFTFPMAE-----IL---------------SYQVGG-----KA 214 (440)
Q Consensus 163 ~~~plVVLlGW~GA~~k---hl~KYa~iY~~~G~nVL~~~~p~~~-----il---------------~~~~g~-----k~ 214 (440)
+++.|.+||||+.+..- .+.+..+...+.+++.+-++.|..- +. .+.|.. ..
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 35679999999997652 2444445454447888887777521 11 011211 11
Q ss_pred hHHHHHHHHHHHHHhhhcCCcEEEEEecccHHHHHHHHHHHHhhcCCC-CccCceEEEecCCCCCCCChhhhhhhhhHHh
Q 040744 215 EQNIELLVNHLADCLEDEGKNLVFHTFSNTGWLTYGAILEKFQNKDPS-LMGRIRGCIVDSAPVASPDPQVWASGFSAAF 293 (440)
Q Consensus 215 ~k~l~~l~~~i~~~l~~~~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~-l~~~VkG~I~DSaPg~~~~~~~~a~gfsaa~ 293 (440)
...++..+++|.++++++..-..+-|||-||.++..-++. .+..... ...++|..|+=|++.-.
T Consensus 83 ~~~~~~sl~~l~~~i~~~GPfdGvlGFSQGA~lAa~ll~~-~~~~~~~~~~~~~kf~V~~sg~~p~-------------- 147 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGPFDGVLGFSQGAALAALLLAL-QQRGRPDGAHPPFKFAVFISGFPPP-------------- 147 (212)
T ss_dssp G---HHHHHHHHHHHHHH---SEEEEETHHHHHHHHHHHH-HHHHST--T----SEEEEES----E--------------
T ss_pred ccCHHHHHHHHHHHHHhcCCeEEEEeecHHHHHHHHHHHH-HHhhcccccCCCceEEEEEcccCCC--------------
Confidence 2345677778877777766567899999999976533322 2222111 22455666665644320
Q ss_pred hccccccccccccccccchhhhhccccCCCCCchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcccCCCCCCEEEE
Q 040744 294 LKKNSVATKGIVYTNELETDELVGSRASGEPKPAVTETALLVVLEKFFEVILHLPAVNRRLSDVLGLLSSGQPACPQLYI 373 (440)
Q Consensus 294 l~~~s~~~~~~~~~~~~~l~~~v~~~~~~~p~~~~~~~~ll~~l~~~f~~~~~~p~~~~rl~~~~~~l~~~~~~~P~LYI 373 (440)
... + + +. ....+..+|.|-|
T Consensus 148 --------------------------------~~~------------------~----~---~~---~~~~~i~iPtlHv 167 (212)
T PF03959_consen 148 --------------------------------DPD------------------Y----Q---EL---YDEPKISIPTLHV 167 (212)
T ss_dssp --------------------------------EE-------------------G----T---TT---T--TT---EEEEE
T ss_pred --------------------------------chh------------------h----h---hh---hccccCCCCeEEE
Confidence 000 0 0 00 0122346899999
Q ss_pred EcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCc
Q 040744 374 YSSADRVIPAESVESFIEEQRKAGREVRACNFVSTP 409 (440)
Q Consensus 374 YS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~ 409 (440)
+|+.|.+++.+..+.+++..... .+...+++.-
T Consensus 168 ~G~~D~~~~~~~s~~L~~~~~~~---~~v~~h~gGH 200 (212)
T PF03959_consen 168 IGENDPVVPPERSEALAEMFDPD---ARVIEHDGGH 200 (212)
T ss_dssp EETT-SSS-HHHHHHHHHHHHHH---EEEEEESSSS
T ss_pred EeCCCCCcchHHHHHHHHhccCC---cEEEEECCCC
Confidence 99999999999999999987764 3455555443
No 84
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=97.54 E-value=0.0014 Score=60.38 Aligned_cols=57 Identities=18% Similarity=0.294 Sum_probs=44.9
Q ss_pred CCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHH
Q 040744 365 QPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLS 426 (440)
Q Consensus 365 ~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~ 426 (440)
...+|.|+++|+.|.++|++.++.+.+... ..+...+++++|..+ -.+|++..+.|.
T Consensus 173 ~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~----~~~~~~~~~~GH~~~-~~~~~~~~~~i~ 229 (230)
T PF00561_consen 173 NIKVPTLIIWGEDDPLVPPESSEQLAKLIP----NSQLVLIEGSGHFAF-LEGPDEFNEIII 229 (230)
T ss_dssp TTTSEEEEEEETTCSSSHHHHHHHHHHHST----TEEEEEETTCCSTHH-HHSHHHHHHHHH
T ss_pred ccCCCeEEEEeCCCCCCCHHHHHHHHHhcC----CCEEEECCCCChHHH-hcCHHhhhhhhc
Confidence 467899999999999999999999654332 367888999999984 466777766654
No 85
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=97.53 E-value=0.001 Score=64.00 Aligned_cols=63 Identities=19% Similarity=0.410 Sum_probs=50.0
Q ss_pred CCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHHHHhh
Q 040744 365 QPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDYVVT 435 (440)
Q Consensus 365 ~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~~~~ 435 (440)
+.++|.|.|+|+.|.+||.+..+.+++...+. ....... +|+-=....|.+.+.+|++.....
T Consensus 161 ~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a-----~vl~Hpg---gH~VP~~~~~~~~i~~fi~~~~~~ 223 (230)
T KOG2551|consen 161 PLSTPSLHIFGETDTIVPSERSEQLAESFKDA-----TVLEHPG---GHIVPNKAKYKEKIADFIQSFLQE 223 (230)
T ss_pred CCCCCeeEEecccceeecchHHHHHHHhcCCC-----eEEecCC---CccCCCchHHHHHHHHHHHHHHHh
Confidence 45689999999999999999999999987654 4444444 456667778999999999876643
No 86
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.47 E-value=0.0007 Score=67.23 Aligned_cols=87 Identities=14% Similarity=0.167 Sum_probs=50.0
Q ss_pred CCCCeEEEEeeecCCch-hhHHHHHHHHHH-CCCeEEEEecCCCceeecccch-hhhHHHHHHHHHHHHHhhh---cCCc
Q 040744 162 MKSRTVVVLLGWLGAKQ-KHLRKYAEWYTS-KGFHVITFTFPMAEILSYQVGG-KAEQNIELLVNHLADCLED---EGKN 235 (440)
Q Consensus 162 ~~~~plVVLlGW~GA~~-khl~KYa~iY~~-~G~nVL~~~~p~~~il~~~~g~-k~~k~l~~l~~~i~~~l~~---~~~~ 235 (440)
.+.+++|++|||+++.. ......++.|.. .+++|+.++.+......+.... ..+...+.+.+.|..+.++ ...+
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~ 113 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLEN 113 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHH
Confidence 45688999999999773 335556665654 5899999997642111111100 0111112222222221122 2468
Q ss_pred EEEEEecccHHHH
Q 040744 236 LVFHTFSNTGWLT 248 (440)
Q Consensus 236 Il~H~FSnGG~~~ 248 (440)
|.+-||||||..+
T Consensus 114 i~lIGhSlGa~vA 126 (275)
T cd00707 114 VHLIGHSLGAHVA 126 (275)
T ss_pred EEEEEecHHHHHH
Confidence 9999999999975
No 87
>PLN00021 chlorophyllase
Probab=97.30 E-value=0.0022 Score=65.10 Aligned_cols=84 Identities=18% Similarity=0.237 Sum_probs=51.4
Q ss_pred CCCeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhh--------hcCC
Q 040744 163 KSRTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLE--------DEGK 234 (440)
Q Consensus 163 ~~~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~--------~~~~ 234 (440)
..+.||++|||++.. +......+...+.||.|+.++.+. +........-...+.+++++.+.++ .+..
T Consensus 51 ~~PvVv~lHG~~~~~-~~y~~l~~~Las~G~~VvapD~~g---~~~~~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~ 126 (313)
T PLN00021 51 TYPVLLFLHGYLLYN-SFYSQLLQHIASHGFIVVAPQLYT---LAGPDGTDEIKDAAAVINWLSSGLAAVLPEGVRPDLS 126 (313)
T ss_pred CCCEEEEECCCCCCc-ccHHHHHHHHHhCCCEEEEecCCC---cCCCCchhhHHHHHHHHHHHHhhhhhhcccccccChh
Confidence 347899999999865 345556677788999999987653 1110111111122334444443221 1236
Q ss_pred cEEEEEecccHHHHHH
Q 040744 235 NLVFHTFSNTGWLTYG 250 (440)
Q Consensus 235 ~Il~H~FSnGG~~~~~ 250 (440)
++.+-|+||||.+++.
T Consensus 127 ~v~l~GHS~GG~iA~~ 142 (313)
T PLN00021 127 KLALAGHSRGGKTAFA 142 (313)
T ss_pred heEEEEECcchHHHHH
Confidence 8999999999998753
No 88
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.29 E-value=0.013 Score=59.88 Aligned_cols=149 Identities=19% Similarity=0.219 Sum_probs=87.4
Q ss_pred HHHHHhHhhhccC-----CCCCCCCCCCCCCCCCce---eeecCCCCccccCCCCCcCCCCCCeEEEEeeecCCchhh-H
Q 040744 111 VNVYQSAELAKAS-----KPTKTTGSIPASYSDVLY---RWHLPETDAIDVSGTSDCLAMKSRTVVVLLGWLGAKQKH-L 181 (440)
Q Consensus 111 ~~~~~~~~~~~~~-----~~~~~~~~~p~~~~~~~y---~~~~p~~~~~~~~~~~~~~~~~~~plVVLlGW~GA~~kh-l 181 (440)
.+.+|.+..+... .+.....-+|-..++... .+++|++ .+++++++..|=.++=+.+ +
T Consensus 89 ~~~l~~~~~~~~~~~~~~~~~~~~kRv~Iq~D~~~IDt~~I~~~~a-------------~~~RWiL~s~GNg~~~E~~~~ 155 (365)
T PF05677_consen 89 EKILQEAYLAQIDNWFSDDEVSSVKRVPIQYDGVKIDTMAIHQPEA-------------KPQRWILVSNGNGECYENRAM 155 (365)
T ss_pred HHHHHHHHHHHhhhhhccccccceeeEEEeeCCEEEEEEEeeCCCC-------------CCCcEEEEEcCChHHhhhhhh
Confidence 5556666555544 223333444544444432 4666543 4568999999977766543 2
Q ss_pred -----HHHHHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhc-----CCcEEEEEecccHHHHHHH
Q 040744 182 -----RKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDE-----GKNLVFHTFSNTGWLTYGA 251 (440)
Q Consensus 182 -----~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~-----~~~Il~H~FSnGG~~~~~~ 251 (440)
.-..+++...|.||+.|.+|- +..+.|....+++-.-.+.+..|+.++ ...|+.+|.|.||+....
T Consensus 156 ~~~~~~~~~~~ak~~~aNvl~fNYpG---Vg~S~G~~s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~- 231 (365)
T PF05677_consen 156 LDYKDDWIQRFAKELGANVLVFNYPG---VGSSTGPPSRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAE- 231 (365)
T ss_pred hccccHHHHHHHHHcCCcEEEECCCc---cccCCCCCCHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHH-
Confidence 235677888999999999984 222333322232322334444555442 579999999999998643
Q ss_pred HHHHHhhcCCCCccCce-EEEecCCCCCC
Q 040744 252 ILEKFQNKDPSLMGRIR-GCIVDSAPVAS 279 (440)
Q Consensus 252 Ll~~l~~~~~~l~~~Vk-G~I~DSaPg~~ 279 (440)
+++++.-...+.|+ .+|-|-+|.+.
T Consensus 232 ---AL~~~~~~~~dgi~~~~ikDRsfssl 257 (365)
T PF05677_consen 232 ---ALKKEVLKGSDGIRWFLIKDRSFSSL 257 (365)
T ss_pred ---HHHhcccccCCCeeEEEEecCCcchH
Confidence 34332111223455 67889998763
No 89
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=97.21 E-value=0.019 Score=55.38 Aligned_cols=234 Identities=15% Similarity=0.169 Sum_probs=120.7
Q ss_pred eeecCCCCccccCCCCCcCCCCCCeEEEEeeecCCchhh-HHHHHHHHHHCCCeEEEEecCCC----ceeecccchhhhH
Q 040744 142 RWHLPETDAIDVSGTSDCLAMKSRTVVVLLGWLGAKQKH-LRKYAEWYTSKGFHVITFTFPMA----EILSYQVGGKAEQ 216 (440)
Q Consensus 142 ~~~~p~~~~~~~~~~~~~~~~~~~plVVLlGW~GA~~kh-l~KYa~iY~~~G~nVL~~~~p~~----~il~~~~g~k~~k 216 (440)
.+.+|......+.+ .-...++.+.+|++||....+-.. +.--++...+.|+.+++|++.-. +-+.++.+....
T Consensus 12 ~ivi~n~~ne~lvg-~lh~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~ea- 89 (269)
T KOG4667|consen 12 KIVIPNSRNEKLVG-LLHETGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEA- 89 (269)
T ss_pred EEEeccCCCchhhc-ceeccCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchH-
Confidence 67787777665544 334446778999999999877655 44458888999999999998742 223344444333
Q ss_pred HHHHHHHHHHHHhhhc-CCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhhhhhhHHhhc
Q 040744 217 NIELLVNHLADCLEDE-GKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWASGFSAAFLK 295 (440)
Q Consensus 217 ~l~~l~~~i~~~l~~~-~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~gfsaa~l~ 295 (440)
++|-..+ .++... .--=++-+.|-||-.++ .+.+.... |.-+|.= +|+.-........+....+.
T Consensus 90 --dDL~sV~-q~~s~~nr~v~vi~gHSkGg~Vvl-----~ya~K~~d----~~~viNc--sGRydl~~~I~eRlg~~~l~ 155 (269)
T KOG4667|consen 90 --DDLHSVI-QYFSNSNRVVPVILGHSKGGDVVL-----LYASKYHD----IRNVINC--SGRYDLKNGINERLGEDYLE 155 (269)
T ss_pred --HHHHHHH-HHhccCceEEEEEEeecCccHHHH-----HHHHhhcC----chheEEc--ccccchhcchhhhhcccHHH
Confidence 3443333 222222 22234568899988653 22222111 3334432 33321111110000001111
Q ss_pred cccccccccccc-cccchhhhhccccCCCCCchHHHHHHHHHHHHHHHHHhhhhhhhhhhh-hhhhhcccCCCCCCEEEE
Q 040744 296 KNSVATKGIVYT-NELETDELVGSRASGEPKPAVTETALLVVLEKFFEVILHLPAVNRRLS-DVLGLLSSGQPACPQLYI 373 (440)
Q Consensus 296 ~~s~~~~~~~~~-~~~~l~~~v~~~~~~~p~~~~~~~~ll~~l~~~f~~~~~~p~~~~rl~-~~~~~l~~~~~~~P~LYI 373 (440)
+ ++.+|-.-. .|.+ .. + ..+++-. .+ .+|. +..+.....+..||.|-.
T Consensus 156 ~--ike~Gfid~~~rkG-----~y-----~-~rvt~eS---lm--------------drLntd~h~aclkId~~C~VLTv 205 (269)
T KOG4667|consen 156 R--IKEQGFIDVGPRKG-----KY-----G-YRVTEES---LM--------------DRLNTDIHEACLKIDKQCRVLTV 205 (269)
T ss_pred H--HHhCCceecCcccC-----Cc-----C-ceecHHH---HH--------------HHHhchhhhhhcCcCccCceEEE
Confidence 0 011111100 0000 00 0 1111111 11 1111 222222345678999999
Q ss_pred EcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHH
Q 040744 374 YSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQ 427 (440)
Q Consensus 374 YS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~ 427 (440)
||.+|.+||-++..+|+..-. + -..++.+|+.|. |-.|.++-...+..
T Consensus 206 hGs~D~IVPve~AkefAk~i~--n--H~L~iIEgADHn--yt~~q~~l~~lgl~ 253 (269)
T KOG4667|consen 206 HGSEDEIVPVEDAKEFAKIIP--N--HKLEIIEGADHN--YTGHQSQLVSLGLE 253 (269)
T ss_pred eccCCceeechhHHHHHHhcc--C--CceEEecCCCcC--ccchhhhHhhhcce
Confidence 999999999999999997543 2 357889999996 33344433333333
No 90
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=97.21 E-value=0.012 Score=54.83 Aligned_cols=168 Identities=18% Similarity=0.241 Sum_probs=102.0
Q ss_pred CeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhcCCcEEEEEeccc
Q 040744 165 RTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDEGKNLVFHTFSNT 244 (440)
Q Consensus 165 ~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~~~~Il~H~FSnG 244 (440)
..++|++||.|+.+-| |-..+.+.-.++-++..+. + ..+.++++++.+.+.+....++.++=+.|-|
T Consensus 3 ~~~lIVpG~~~Sg~~H---Wq~~we~~l~~a~rveq~~-------w---~~P~~~dWi~~l~~~v~a~~~~~vlVAHSLG 69 (181)
T COG3545 3 TDVLIVPGYGGSGPNH---WQSRWESALPNARRVEQDD-------W---EAPVLDDWIARLEKEVNAAEGPVVLVAHSLG 69 (181)
T ss_pred ceEEEecCCCCCChhH---HHHHHHhhCccchhcccCC-------C---CCCCHHHHHHHHHHHHhccCCCeEEEEeccc
Confidence 5789999999988654 5555555544433332221 1 1234567777776655555778999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhhhhhhHHhhccccccccccccccccchhhhhccccCCCC
Q 040744 245 GWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWASGFSAAFLKKNSVATKGIVYTNELETDELVGSRASGEP 324 (440)
Q Consensus 245 G~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~gfsaa~l~~~s~~~~~~~~~~~~~l~~~v~~~~~~~p 324 (440)
..++.-.+ +..+ .+|+|.++=+.|-... +..
T Consensus 70 c~~v~h~~-~~~~-------~~V~GalLVAppd~~~-~~~---------------------------------------- 100 (181)
T COG3545 70 CATVAHWA-EHIQ-------RQVAGALLVAPPDVSR-PEI---------------------------------------- 100 (181)
T ss_pred HHHHHHHH-Hhhh-------hccceEEEecCCCccc-ccc----------------------------------------
Confidence 98764222 2111 3799999988664321 000
Q ss_pred CchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcccCCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEE
Q 040744 325 KPAVTETALLVVLEKFFEVILHLPAVNRRLSDVLGLLSSGQPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACN 404 (440)
Q Consensus 325 ~~~~~~~~ll~~l~~~f~~~~~~p~~~~rl~~~~~~l~~~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~ 404 (440)
.+.. +.. +..+| ..+...|.+.+.|++|++++++..|++++.+-..
T Consensus 101 ~~~~--------~~t----f~~~p--------------~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wgs~-------- 146 (181)
T COG3545 101 RPKH--------LMT----FDPIP--------------REPLPFPSVVVASRNDPYVSYEHAEDLANAWGSA-------- 146 (181)
T ss_pred chhh--------ccc----cCCCc--------------cccCCCceeEEEecCCCCCCHHHHHHHHHhccHh--------
Confidence 0000 000 00111 2334568899999999999999999999876433
Q ss_pred eCCCccccccccC------hHHHHHHHHHHH
Q 040744 405 FVSTPHVDHFRND------PKLYTTQLSQFL 429 (440)
Q Consensus 405 F~~S~HV~H~R~~------PeeY~~aV~~FL 429 (440)
+.+.+|.+|+..+ |+.| ..+.+|+
T Consensus 147 lv~~g~~GHiN~~sG~g~wpeg~-~~l~~~~ 176 (181)
T COG3545 147 LVDVGEGGHINAESGFGPWPEGY-ALLAQLL 176 (181)
T ss_pred heecccccccchhhcCCCcHHHH-HHHHHHh
Confidence 4567777777765 6666 3344443
No 91
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=97.17 E-value=0.033 Score=56.77 Aligned_cols=233 Identities=16% Similarity=0.187 Sum_probs=112.8
Q ss_pred CCCc-eeeecCCCCccccCCCCC-cCC---CCCCeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCc-----ee
Q 040744 137 SDVL-YRWHLPETDAIDVSGTSD-CLA---MKSRTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAE-----IL 206 (440)
Q Consensus 137 ~~~~-y~~~~p~~~~~~~~~~~~-~~~---~~~~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~-----il 206 (440)
.... |++.|-+..+. ...||. .|. ++.+.||..||++|.+.. .... -.|...||-|+.++.+-.. ..
T Consensus 52 ~~~~vy~v~f~s~~g~-~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~-~~~~-~~~a~~G~~vl~~d~rGqg~~~~d~~ 128 (320)
T PF05448_consen 52 PGVEVYDVSFESFDGS-RVYGWLYRPKNAKGKLPAVVQFHGYGGRSGD-PFDL-LPWAAAGYAVLAMDVRGQGGRSPDYR 128 (320)
T ss_dssp SSEEEEEEEEEEGGGE-EEEEEEEEES-SSSSEEEEEEE--TT--GGG-HHHH-HHHHHTT-EEEEE--TTTSSSS-B-S
T ss_pred CCEEEEEEEEEccCCC-EEEEEEEecCCCCCCcCEEEEecCCCCCCCC-cccc-cccccCCeEEEEecCCCCCCCCCCcc
Confidence 4444 69999655543 344454 332 233457778999986432 2222 2377899999998875321 10
Q ss_pred e--------c---ccch-hh----hHHHHHHHHHHHHHhhh----cCCcEEEEEecccHHHHHHHHHHHHhhcCCCCccC
Q 040744 207 S--------Y---QVGG-KA----EQNIELLVNHLADCLED----EGKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGR 266 (440)
Q Consensus 207 ~--------~---~~g~-k~----~k~l~~l~~~i~~~l~~----~~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~ 266 (440)
. + .... +. ...+.+.+..+ +++.. +.++|.+.|-|.||+.++ ++.+|. ++
T Consensus 129 ~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~rav-d~l~slpevD~~rI~v~G~SqGG~lal--~~aaLd-------~r 198 (320)
T PF05448_consen 129 GSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAV-DFLRSLPEVDGKRIGVTGGSQGGGLAL--AAAALD-------PR 198 (320)
T ss_dssp SBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHH-HHHHTSTTEEEEEEEEEEETHHHHHHH--HHHHHS-------ST
T ss_pred ccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHH-HHHHhCCCcCcceEEEEeecCchHHHH--HHHHhC-------cc
Confidence 0 0 0111 11 11122333333 44433 268999999999999774 333442 57
Q ss_pred ceEEEecCCCCCCCChhhhhhhhhHHhhccccccccccccccccchhhhhccccCCCCCchHHHHHHHHHHHHHHHHHh-
Q 040744 267 IRGCIVDSAPVASPDPQVWASGFSAAFLKKNSVATKGIVYTNELETDELVGSRASGEPKPAVTETALLVVLEKFFEVIL- 345 (440)
Q Consensus 267 VkG~I~DSaPg~~~~~~~~a~gfsaa~l~~~s~~~~~~~~~~~~~l~~~v~~~~~~~p~~~~~~~~ll~~l~~~f~~~~- 345 (440)
|++++.+-+.... +...+. +... . .|...+ ..++....
T Consensus 199 v~~~~~~vP~l~d-----~~~~~~---~~~~----~--------------------~~y~~~---------~~~~~~~d~ 237 (320)
T PF05448_consen 199 VKAAAADVPFLCD-----FRRALE---LRAD----E--------------------GPYPEI---------RRYFRWRDP 237 (320)
T ss_dssp -SEEEEESESSSS-----HHHHHH---HT------S--------------------TTTHHH---------HHHHHHHSC
T ss_pred ccEEEecCCCccc-----hhhhhh---cCCc----c--------------------ccHHHH---------HHHHhccCC
Confidence 9999999854332 111111 0000 0 001100 01111000
Q ss_pred ---hhhhhhhhhhhhhhhc-ccCCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHH
Q 040744 346 ---HLPAVNRRLSDVLGLL-SSGQPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLY 421 (440)
Q Consensus 346 ---~~p~~~~rl~~~~~~l-~~~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY 421 (440)
..+.+-+.+ .+.+.. -....+||.++-.|-.|++||+.-+-..++... .+++.+.++...|-. .++..
T Consensus 238 ~~~~~~~v~~~L-~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~---~~K~l~vyp~~~He~----~~~~~ 309 (320)
T PF05448_consen 238 HHEREPEVFETL-SYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIP---GPKELVVYPEYGHEY----GPEFQ 309 (320)
T ss_dssp THCHHHHHHHHH-HTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC-----SSEEEEEETT--SST----THHHH
T ss_pred CcccHHHHHHHH-hhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccC---CCeeEEeccCcCCCc----hhhHH
Confidence 000000000 111111 023457999999999999999999999998664 358899999888853 23333
Q ss_pred HHHHHHHHHH
Q 040744 422 TTQLSQFLED 431 (440)
Q Consensus 422 ~~aV~~FL~~ 431 (440)
+++..+|+++
T Consensus 310 ~~~~~~~l~~ 319 (320)
T PF05448_consen 310 EDKQLNFLKE 319 (320)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 8888888875
No 92
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=97.12 E-value=0.0064 Score=56.40 Aligned_cols=90 Identities=10% Similarity=0.152 Sum_probs=54.4
Q ss_pred EEEEeeecCCchhh-HHHHHHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhcCCcEEEEEecccH
Q 040744 167 VVVLLGWLGAKQKH-LRKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDEGKNLVFHTFSNTG 245 (440)
Q Consensus 167 lVVLlGW~GA~~kh-l~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~~~~Il~H~FSnGG 245 (440)
|+|+|||.|+.+.| ..-..+.|.+. .++..+. + ....++.+++.+.+.+..-.++.+|=+.|.|.
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~----~~V~~~~-------~---~~P~~~~W~~~l~~~i~~~~~~~ilVaHSLGc 66 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS----VRVEQPD-------W---DNPDLDEWVQALDQAIDAIDEPTILVAHSLGC 66 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS----EEEEEC------------TS--HHHHHHHHHHCCHC-TTTEEEEEETHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC----eEEeccc-------c---CCCCHHHHHHHHHHHHhhcCCCeEEEEeCHHH
Confidence 68999999999999 44445666655 2332221 1 11234556666665555446789999999999
Q ss_pred HHHHHHHHHHHhhcCCCCccCceEEEecCCCC
Q 040744 246 WLTYGAILEKFQNKDPSLMGRIRGCIVDSAPV 277 (440)
Q Consensus 246 ~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg 277 (440)
.++...+. . . ...+|+|+++=|+|.
T Consensus 67 ~~~l~~l~---~-~---~~~~v~g~lLVAp~~ 91 (171)
T PF06821_consen 67 LTALRWLA---E-Q---SQKKVAGALLVAPFD 91 (171)
T ss_dssp HHHHHHHH---H-T---CCSSEEEEEEES--S
T ss_pred HHHHHHHh---h-c---ccccccEEEEEcCCC
Confidence 98765553 1 1 235899999999774
No 93
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=97.05 E-value=0.0044 Score=67.29 Aligned_cols=106 Identities=11% Similarity=0.025 Sum_probs=65.6
Q ss_pred CCCeEEEEeeecCCch---hhHHHHHHHHHHCCCeEEEEecCCC---ceeecccchhhhHHHHHHHHHHHHHhhhc--CC
Q 040744 163 KSRTVVVLLGWLGAKQ---KHLRKYAEWYTSKGFHVITFTFPMA---EILSYQVGGKAEQNIELLVNHLADCLEDE--GK 234 (440)
Q Consensus 163 ~~~plVVLlGW~GA~~---khl~KYa~iY~~~G~nVL~~~~p~~---~il~~~~g~k~~k~l~~l~~~i~~~l~~~--~~ 234 (440)
+.+.||++|||..... .....+.+.+.++||.|++++.+-. +.-....+....+++..+++++. ++. +.
T Consensus 21 ~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~~~~D~~~~i~~l~---~q~~~~~ 97 (550)
T TIGR00976 21 PVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLGSDEAADGYDLVDWIA---KQPWCDG 97 (550)
T ss_pred CCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecCcccchHHHHHHHHHH---hCCCCCC
Confidence 3467888999987542 1233467788999999999999742 11000111222233444444443 222 56
Q ss_pred cEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCC
Q 040744 235 NLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVAS 279 (440)
Q Consensus 235 ~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~ 279 (440)
+|.+.|+|+||.+++... . .. +++++++|..++..+.
T Consensus 98 ~v~~~G~S~GG~~a~~~a---~--~~---~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 98 NVGMLGVSYLAVTQLLAA---V--LQ---PPALRAIAPQEGVWDL 134 (550)
T ss_pred cEEEEEeChHHHHHHHHh---c--cC---CCceeEEeecCcccch
Confidence 999999999999864211 1 11 2579999998877653
No 94
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=97.05 E-value=0.042 Score=54.87 Aligned_cols=208 Identities=18% Similarity=0.152 Sum_probs=111.9
Q ss_pred CCCCeEEEEee--ecC-CchhhHHHHHHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHh---hhcCCc
Q 040744 162 MKSRTVVVLLG--WLG-AKQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCL---EDEGKN 235 (440)
Q Consensus 162 ~~~~plVVLlG--W~G-A~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l---~~~~~~ 235 (440)
.+.+.||.+|| |.. ....|-.....+....|+.|+.++++...-- .+.... .++...+.++.+-. ..+.++
T Consensus 77 ~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~--~~p~~~-~d~~~a~~~l~~~~~~~g~dp~~ 153 (312)
T COG0657 77 ATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH--PFPAAL-EDAYAAYRWLRANAAELGIDPSR 153 (312)
T ss_pred CCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC--CCCchH-HHHHHHHHHHHhhhHhhCCCccc
Confidence 34678888997 544 3434446668888899999999999864321 111111 11223333433221 123789
Q ss_pred EEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhhhhhhHHhhccccccccccccccccchhhh
Q 040744 236 LVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWASGFSAAFLKKNSVATKGIVYTNELETDEL 315 (440)
Q Consensus 236 Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~gfsaa~l~~~s~~~~~~~~~~~~~l~~~ 315 (440)
|.+-|.|-||.++....+. .++. . ....+++|+-|.-.+... .......
T Consensus 154 i~v~GdSAGG~La~~~a~~-~~~~--~-~~~p~~~~li~P~~d~~~--------~~~~~~~------------------- 202 (312)
T COG0657 154 IAVAGDSAGGHLALALALA-ARDR--G-LPLPAAQVLISPLLDLTS--------SAASLPG------------------- 202 (312)
T ss_pred eEEEecCcccHHHHHHHHH-HHhc--C-CCCceEEEEEecccCCcc--------cccchhh-------------------
Confidence 9999999999987432222 2221 1 135678888883333210 0000000
Q ss_pred hccccCCCCCchHHHHHHHHHHHHHHHHHhhh-hhhhh-hhhhhh-hhcccCCCCCCEEEEEcCCCCccCHHHHHHHHHH
Q 040744 316 VGSRASGEPKPAVTETALLVVLEKFFEVILHL-PAVNR-RLSDVL-GLLSSGQPACPQLYIYSSADRVIPAESVESFIEE 392 (440)
Q Consensus 316 v~~~~~~~p~~~~~~~~ll~~l~~~f~~~~~~-p~~~~-rl~~~~-~~l~~~~~~~P~LYIYS~aD~lIP~~dVE~~~e~ 392 (440)
.+ +...+....+. .++....... +.... ...... +.+ . .-.|.+.+++..|.+.+ +.+.+.+.
T Consensus 203 ~~------~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~spl~~~~~--~-~lPP~~i~~a~~D~l~~--~~~~~a~~ 268 (312)
T COG0657 203 YG------EADLLDAAAIL---AWFADLYLGAAPDREDPEASPLASDDL--S-GLPPTLIQTAEFDPLRD--EGEAYAER 268 (312)
T ss_pred cC------CccccCHHHHH---HHHHHHhCcCccccCCCccCccccccc--c-CCCCEEEEecCCCcchh--HHHHHHHH
Confidence 00 00011111111 1122221111 00000 011100 001 1 13478999999999999 99999999
Q ss_pred HHHcCCceEEEEeCCCccccccccC
Q 040744 393 QRKAGREVRACNFVSTPHVDHFRND 417 (440)
Q Consensus 393 ~r~~G~~V~~~~F~~S~HV~H~R~~ 417 (440)
.++.|..++...|++..|.=+....
T Consensus 269 L~~agv~~~~~~~~g~~H~f~~~~~ 293 (312)
T COG0657 269 LRAAGVPVELRVYPGMIHGFDLLTG 293 (312)
T ss_pred HHHcCCeEEEEEeCCcceeccccCc
Confidence 9999999999999999994433433
No 95
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.98 E-value=0.038 Score=52.43 Aligned_cols=59 Identities=22% Similarity=0.250 Sum_probs=44.9
Q ss_pred CCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHH
Q 040744 365 QPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLE 430 (440)
Q Consensus 365 ~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~ 430 (440)
+.++|-|+|++++|++++++.+-+-++ +.+++.....++.|-=|-+. ++-.+.|.+||+
T Consensus 147 P~P~~~lvi~g~~Ddvv~l~~~l~~~~-----~~~~~~i~i~~a~HFF~gKl--~~l~~~i~~~l~ 205 (210)
T COG2945 147 PCPSPGLVIQGDADDVVDLVAVLKWQE-----SIKITVITIPGADHFFHGKL--IELRDTIADFLE 205 (210)
T ss_pred CCCCCceeEecChhhhhcHHHHHHhhc-----CCCCceEEecCCCceecccH--HHHHHHHHHHhh
Confidence 346789999999998888776655543 35677888899999877655 456688888886
No 96
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=96.89 E-value=0.0099 Score=63.11 Aligned_cols=88 Identities=14% Similarity=0.215 Sum_probs=49.4
Q ss_pred CCCCeEEEEeeecCCc--hhhHHHHHHHH-HHC-CCeEEEEecCCCceeecccc-hhh---hHHHHHHHHHHHHHhhhcC
Q 040744 162 MKSRTVVVLLGWLGAK--QKHLRKYAEWY-TSK-GFHVITFTFPMAEILSYQVG-GKA---EQNIELLVNHLADCLEDEG 233 (440)
Q Consensus 162 ~~~~plVVLlGW~GA~--~khl~KYa~iY-~~~-G~nVL~~~~p~~~il~~~~g-~k~---~k~l~~l~~~i~~~l~~~~ 233 (440)
.+.+++|++|||++.. ...+...++.+ ... .+||++++.+-..-..+... ... ...+..+++++.+.+....
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l 118 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPW 118 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCC
Confidence 5678999999999753 23355565544 333 69999999874211111111 111 1112223333321111125
Q ss_pred CcEEEEEecccHHHHH
Q 040744 234 KNLVFHTFSNTGWLTY 249 (440)
Q Consensus 234 ~~Il~H~FSnGG~~~~ 249 (440)
.++.+-|+||||..+.
T Consensus 119 ~~VhLIGHSLGAhIAg 134 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAG 134 (442)
T ss_pred CcEEEEEECHHHHHHH
Confidence 7899999999999764
No 97
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=96.73 E-value=0.019 Score=58.02 Aligned_cols=107 Identities=11% Similarity=0.190 Sum_probs=52.6
Q ss_pred CCeEEEEeeecC--CchhhHHHHHHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhh------cCCc
Q 040744 164 SRTVVVLLGWLG--AKQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLED------EGKN 235 (440)
Q Consensus 164 ~~plVVLlGW~G--A~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~------~~~~ 235 (440)
++.||+|=|=.+ ..-.++..-++...+.||.++.+....+. ..++.+ ..+++++++.+.| +|+.. +...
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy-~G~G~~-SL~~D~~eI~~~v-~ylr~~~~g~~~~~k 109 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSY-SGWGTS-SLDRDVEEIAQLV-EYLRSEKGGHFGREK 109 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGB-TTS-S---HHHHHHHHHHHH-HHHHHHS------S-
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCcc-CCcCcc-hhhhHHHHHHHHH-HHHHHhhccccCCcc
Confidence 345666666554 33356777788888899999987665431 122222 2344444443333 33322 2679
Q ss_pred EEEEEecccHHHHHHHHHHHHhhcCC-CCccCceEEEecCCCC
Q 040744 236 LVFHTFSNTGWLTYGAILEKFQNKDP-SLMGRIRGCIVDSAPV 277 (440)
Q Consensus 236 Il~H~FSnGG~~~~~~Ll~~l~~~~~-~l~~~VkG~I~DSaPg 277 (440)
|++-|.|-|-=-++.++ ..... ....+|+|+|+-..-+
T Consensus 110 IVLmGHSTGcQdvl~Yl----~~~~~~~~~~~VdG~ILQApVS 148 (303)
T PF08538_consen 110 IVLMGHSTGCQDVLHYL----SSPNPSPSRPPVDGAILQAPVS 148 (303)
T ss_dssp EEEEEECCHHHHHHHHH----HH-TT---CCCEEEEEEEEE--
T ss_pred EEEEecCCCcHHHHHHH----hccCccccccceEEEEEeCCCC
Confidence 99999995533333333 22111 1247899999998444
No 98
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=96.73 E-value=0.11 Score=56.60 Aligned_cols=51 Identities=18% Similarity=0.266 Sum_probs=40.2
Q ss_pred CCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccCh
Q 040744 364 GQPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDP 418 (440)
Q Consensus 364 ~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~P 418 (440)
...+||.|.+.++.|.++||+.+....+.- |-+++.+. -.++|++-.-.-|
T Consensus 438 ~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~---gs~~~fvl-~~gGHIggivnpP 488 (560)
T TIGR01839 438 KKVKCDSFSVAGTNDHITPWDAVYRSALLL---GGKRRFVL-SNSGHIQSILNPP 488 (560)
T ss_pred hcCCCCeEEEecCcCCcCCHHHHHHHHHHc---CCCeEEEe-cCCCccccccCCC
Confidence 456899999999999999999999887643 44665554 4789998877655
No 99
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=96.69 E-value=0.089 Score=54.13 Aligned_cols=58 Identities=21% Similarity=0.334 Sum_probs=47.7
Q ss_pred CCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHH
Q 040744 368 CPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLE 430 (440)
Q Consensus 368 ~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~ 430 (440)
.-..++..+.|.+||.+.+.++-+.| .|.+|+. -+++||+.|-.|.+.|.++|.+-++
T Consensus 290 ~~ii~V~A~~DaYVPr~~v~~Lq~~W--PGsEvR~---l~gGHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 290 SAIIFVAAKNDAYVPRHGVLSLQEIW--PGSEVRY---LPGGHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred CcEEEEEecCceEechhhcchHHHhC--CCCeEEE---ecCCcEEEeeechHHHHHHHHHHhh
Confidence 35688999999999999999777765 4665444 4669999999999999999988664
No 100
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=96.62 E-value=0.041 Score=62.35 Aligned_cols=65 Identities=18% Similarity=0.194 Sum_probs=56.7
Q ss_pred EEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHHHHh
Q 040744 370 QLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDYVV 434 (440)
Q Consensus 370 ~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~~~ 434 (440)
-|+|||++|+-|+.+.--+++++.+.+|...++..|++..|-=-.+..-..+...+..|++.|+.
T Consensus 685 ~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~ 749 (755)
T KOG2100|consen 685 LLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFG 749 (755)
T ss_pred EEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcC
Confidence 49999999999999999999999999999999999999999877766545566788888887764
No 101
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=96.48 E-value=0.034 Score=54.01 Aligned_cols=116 Identities=20% Similarity=0.250 Sum_probs=73.6
Q ss_pred CCCCeEEEEeeecCCchhhHHHHHHHHHHCCCe--EEEEecCCCc-eeecccch-hhhHHHHHHHHHHHHHhhh-cCCcE
Q 040744 162 MKSRTVVVLLGWLGAKQKHLRKYAEWYTSKGFH--VITFTFPMAE-ILSYQVGG-KAEQNIELLVNHLADCLED-EGKNL 236 (440)
Q Consensus 162 ~~~~plVVLlGW~GA~~khl~KYa~iY~~~G~n--VL~~~~p~~~-il~~~~g~-k~~k~l~~l~~~i~~~l~~-~~~~I 236 (440)
++++-+|++|||...-+.-+.+++++.+..|+. ++.|+-|... .+.|.... .++.....+.+.|.++.+. ...+|
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 456789999999998878899999999999995 6666666532 22222111 1222223333334333333 27899
Q ss_pred EEEEecccHHHHHHHHHHHHhhcCC-CCccCceEEEecCCCCC
Q 040744 237 VFHTFSNTGWLTYGAILEKFQNKDP-SLMGRIRGCIVDSAPVA 278 (440)
Q Consensus 237 l~H~FSnGG~~~~~~Ll~~l~~~~~-~l~~~VkG~I~DSaPg~ 278 (440)
-+-+.|||+..+...|.....+... ....++..+|+-. |..
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~A-pDi 137 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAA-PDI 137 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEEC-CCC
Confidence 9999999999887766554443221 2334677788875 543
No 102
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=96.45 E-value=0.0087 Score=62.53 Aligned_cols=66 Identities=18% Similarity=0.258 Sum_probs=56.8
Q ss_pred CCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCC-CccccccccChHHHHHHHHHHHHH
Q 040744 365 QPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVS-TPHVDHFRNDPKLYTTQLSQFLED 431 (440)
Q Consensus 365 ~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~-S~HV~H~R~~PeeY~~aV~~FL~~ 431 (440)
..++|.|+|+++.|.++|.+..+++.+.....|.+++.+.+++ ..|..++ .+|+++.+.+.+|+++
T Consensus 321 ~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~l-e~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 321 NIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGV-FDIHLFEKKIYEFLNR 387 (389)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhh-cCHHHHHHHHHHHHcc
Confidence 4578999999999999999999999887665555677888875 8999988 6999999999999975
No 103
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=96.41 E-value=0.36 Score=50.90 Aligned_cols=67 Identities=9% Similarity=0.022 Sum_probs=54.0
Q ss_pred CCC-CCEEEEEcCCCCccCHHHHHHHHHHHHHcCC-ceEEEEeCCCccccccccC--hHHHHHHHHHHHHH
Q 040744 365 QPA-CPQLYIYSSADRVIPAESVESFIEEQRKAGR-EVRACNFVSTPHVDHFRND--PKLYTTQLSQFLED 431 (440)
Q Consensus 365 ~~~-~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~-~V~~~~F~~S~HV~H~R~~--PeeY~~aV~~FL~~ 431 (440)
..+ +|.|.+.|+.|+++|++..+...+.+..-+- +.+.+.+.+.+|++.+-.- +++=|-.|.+||.+
T Consensus 335 ~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 335 AITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred HCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 345 9999999999999999999999987643332 4556777899999998664 67788999999875
No 104
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=96.40 E-value=0.042 Score=52.52 Aligned_cols=70 Identities=20% Similarity=0.261 Sum_probs=42.0
Q ss_pred CCCCCCEEEEEcCCCCccCHHHHHHHH-HHHHHcCCc--eEEEEeCCCcccccc------cc------------------
Q 040744 364 GQPACPQLYIYSSADRVIPAESVESFI-EEQRKAGRE--VRACNFVSTPHVDHF------RN------------------ 416 (440)
Q Consensus 364 ~~~~~P~LYIYS~aD~lIP~~dVE~~~-e~~r~~G~~--V~~~~F~~S~HV~H~------R~------------------ 416 (440)
.+.++|.|+|.|++|.+.|....-+.+ +..++.|.. ++...+++++|.-.. +.
T Consensus 112 E~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~ 191 (213)
T PF08840_consen 112 EKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEA 191 (213)
T ss_dssp GG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S---STT-----EEEETTTTEEEE--B-HHH
T ss_pred HHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCceecCCCCCCcccccccccCCcccCCCChHH
Confidence 345799999999999999987665555 556666765 777888888886321 11
Q ss_pred ---ChHHHHHHHHHHHHHHH
Q 040744 417 ---DPKLYTTQLSQFLEDYV 433 (440)
Q Consensus 417 ---~PeeY~~aV~~FL~~~~ 433 (440)
--++=|+++.+||++..
T Consensus 192 ~a~A~~dsW~~~l~Fl~~~L 211 (213)
T PF08840_consen 192 HAKAQEDSWKKILEFLRKHL 211 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 12456888888888754
No 105
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=96.39 E-value=0.0092 Score=61.09 Aligned_cols=101 Identities=22% Similarity=0.330 Sum_probs=54.3
Q ss_pred CCCCeEEEEeeecCCc--hhhHHHHHHHHHH---CCCeEEEEecCC-CceeecccchhhhHHHHHHHHHHHH---Hhh--
Q 040744 162 MKSRTVVVLLGWLGAK--QKHLRKYAEWYTS---KGFHVITFTFPM-AEILSYQVGGKAEQNIELLVNHLAD---CLE-- 230 (440)
Q Consensus 162 ~~~~plVVLlGW~GA~--~khl~KYa~iY~~---~G~nVL~~~~p~-~~il~~~~g~k~~k~l~~l~~~i~~---~l~-- 230 (440)
.+.+++|++|||.+.. ...+.+..+.|.+ ..+||++++-.. +.. .+. .+....+.+...|.+ .+.
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~-~Y~---~a~~n~~~vg~~la~~l~~L~~~ 144 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN-NYP---QAVANTRLVGRQLAKFLSFLINN 144 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS--HH---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc-ccc---chhhhHHHHHHHHHHHHHHHHhh
Confidence 5678999999999977 4568888776544 489999987642 111 111 111222222222222 222
Q ss_pred --hcCCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceE
Q 040744 231 --DEGKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRG 269 (440)
Q Consensus 231 --~~~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG 269 (440)
.+...|.+-|||.||-. .+..-..+.. ...+ .+|.|
T Consensus 145 ~g~~~~~ihlIGhSLGAHv-aG~aG~~~~~-~~ki-~rItg 182 (331)
T PF00151_consen 145 FGVPPENIHLIGHSLGAHV-AGFAGKYLKG-GGKI-GRITG 182 (331)
T ss_dssp H---GGGEEEEEETCHHHH-HHHHHHHTTT----S-SEEEE
T ss_pred cCCChhHEEEEeeccchhh-hhhhhhhccC-ccee-eEEEe
Confidence 12679999999999986 4555555554 2223 45655
No 106
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.29 E-value=0.033 Score=57.32 Aligned_cols=114 Identities=19% Similarity=0.325 Sum_probs=75.4
Q ss_pred CCCCeEEEEeeecCCchhhHHHHHHHHHHCCCeEEE--EecCC-Cceeecccchh----hhHHHHHHHHHHHHHhhhc-C
Q 040744 162 MKSRTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVIT--FTFPM-AEILSYQVGGK----AEQNIELLVNHLADCLEDE-G 233 (440)
Q Consensus 162 ~~~~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~--~~~p~-~~il~~~~g~k----~~k~l~~l~~~i~~~l~~~-~ 233 (440)
..+.-+|++||+...=+.-+-+.+++-++.|+..+. |+=|. ..++.|..... ....++.++.+|+ ++. .
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La---~~~~~ 190 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLA---TDKPV 190 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHH---hCCCC
Confidence 345678889999998888899999999999997644 44454 34555543211 1222344443332 222 6
Q ss_pred CcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCC
Q 040744 234 KNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVA 278 (440)
Q Consensus 234 ~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~ 278 (440)
+.|.+-..|||.+.++..|..+..+.+..+...|+-+|+=+.=.+
T Consensus 191 ~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 191 KRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred ceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 799999999999987665554444444437778888888874443
No 107
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=96.01 E-value=0.015 Score=55.66 Aligned_cols=64 Identities=25% Similarity=0.401 Sum_probs=55.9
Q ss_pred CCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChH--HHHHHHHHHHHHHH
Q 040744 368 CPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPK--LYTTQLSQFLEDYV 433 (440)
Q Consensus 368 ~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~Pe--eY~~aV~~FL~~~~ 433 (440)
+|.|+++|..|.+||.++.+++++.++.. ......+++..|..-+..++. +|++++.+|+++..
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARER--PKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccC--CceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 79999999999999999999999987764 456777889999998877775 99999999998753
No 108
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=95.68 E-value=0.46 Score=44.77 Aligned_cols=55 Identities=18% Similarity=0.121 Sum_probs=41.6
Q ss_pred CCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHH
Q 040744 366 PACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLE 430 (440)
Q Consensus 366 ~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~ 430 (440)
.+.+.+.+.++.|++++|+...+.+.. + ...+.+|+ +|--.+-++|...|.+|++
T Consensus 133 ~~~~~lvll~~~DEvLd~~~a~~~~~~-----~--~~~i~~gg---dH~f~~f~~~l~~i~~f~~ 187 (187)
T PF05728_consen 133 NPERYLVLLQTGDEVLDYREAVAKYRG-----C--AQIIEEGG---DHSFQDFEEYLPQIIAFLQ 187 (187)
T ss_pred CCccEEEEEecCCcccCHHHHHHHhcC-----c--eEEEEeCC---CCCCccHHHHHHHHHHhhC
Confidence 346889999999999999776665532 2 23455666 6677788999999999973
No 109
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=95.57 E-value=0.03 Score=54.18 Aligned_cols=89 Identities=18% Similarity=0.176 Sum_probs=46.9
Q ss_pred CCeEEEEeeecCCchhhHHHHHHHHHHCCCe---EEEEecCCCceee-cccchhhhHHHHHHHHHHHHHhhhcCCcEEEE
Q 040744 164 SRTVVVLLGWLGAKQKHLRKYAEWYTSKGFH---VITFTFPMAEILS-YQVGGKAEQNIELLVNHLADCLEDEGKNLVFH 239 (440)
Q Consensus 164 ~~plVVLlGW~GA~~khl~KYa~iY~~~G~n---VL~~~~p~~~il~-~~~g~k~~k~l~~l~~~i~~~l~~~~~~Il~H 239 (440)
++|||++||..++.......++..+.+.||. +-..++....... ........+..+.+...|...++.....+=+=
T Consensus 1 ~~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGakVDIV 80 (219)
T PF01674_consen 1 NRPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGAKVDIV 80 (219)
T ss_dssp S--EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT--EEEE
T ss_pred CCCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCCEEEEE
Confidence 4799999999997777888899999999997 5555554322110 00000001112334444433333332399999
Q ss_pred EecccHHHHHHHH
Q 040744 240 TFSNTGWLTYGAI 252 (440)
Q Consensus 240 ~FSnGG~~~~~~L 252 (440)
++||||.+....|
T Consensus 81 gHS~G~~iaR~yi 93 (219)
T PF01674_consen 81 GHSMGGTIARYYI 93 (219)
T ss_dssp EETCHHHHHHHHH
T ss_pred EcCCcCHHHHHHH
Confidence 9999998765554
No 110
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.46 E-value=0.93 Score=44.50 Aligned_cols=255 Identities=17% Similarity=0.142 Sum_probs=126.4
Q ss_pred eecCCCCccccCCCCCcCCCCCCeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCceee------cccchhhhH
Q 040744 143 WHLPETDAIDVSGTSDCLAMKSRTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILS------YQVGGKAEQ 216 (440)
Q Consensus 143 ~~~p~~~~~~~~~~~~~~~~~~~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~------~~~g~k~~k 216 (440)
.++|.+++..+.+.-....++-+..+++-|=.|-......+++..-.+.||+|++++++-...-. ..++.+...
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA 87 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWA 87 (281)
T ss_pred cccccCCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhh
Confidence 67888888765554443233444466666666667788999999999999999999997421111 112211111
Q ss_pred HHHHHHHHHHHHhhh--cCCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhhhhhhHHhh
Q 040744 217 NIELLVNHLADCLED--EGKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWASGFSAAFL 294 (440)
Q Consensus 217 ~l~~l~~~i~~~l~~--~~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~gfsaa~l 294 (440)
..++-..| +.++. +..|.++-|.|+||-.. .++-++ + +--..+||-|.++-.. |. +..-. +
T Consensus 88 -~~D~~aal-~~~~~~~~~~P~y~vgHS~GGqa~-----gL~~~~-~---k~~a~~vfG~gagwsg----~m-~~~~~-l 150 (281)
T COG4757 88 -RLDFPAAL-AALKKALPGHPLYFVGHSFGGQAL-----GLLGQH-P---KYAAFAVFGSGAGWSG----WM-GLRER-L 150 (281)
T ss_pred -hcchHHHH-HHHHhhCCCCceEEeeccccceee-----cccccC-c---ccceeeEecccccccc----ch-hhhhc-c
Confidence 12222222 22333 47899999999999742 222211 1 1224688988887432 11 10000 0
Q ss_pred ccccccccccc---cccccchhh-hhccccCCCCCchHHHHHHHHHHHHHHHHHhhhhhh---hhhhhhhhhhcccCCCC
Q 040744 295 KKNSVATKGIV---YTNELETDE-LVGSRASGEPKPAVTETALLVVLEKFFEVILHLPAV---NRRLSDVLGLLSSGQPA 367 (440)
Q Consensus 295 ~~~s~~~~~~~---~~~~~~l~~-~v~~~~~~~p~~~~~~~~ll~~l~~~f~~~~~~p~~---~~rl~~~~~~l~~~~~~ 367 (440)
+-....+.+.. .+.. +++. +++.-. .-+. .+.+-+......|.. .-++..+.+.. ...+
T Consensus 151 ~~~~l~~lv~p~lt~w~g-~~p~~l~G~G~----d~p~-------~v~RdW~RwcR~p~y~fddp~~~~~~q~y--aaVr 216 (281)
T COG4757 151 GAVLLWNLVGPPLTFWKG-YMPKDLLGLGS----DLPG-------TVMRDWARWCRHPRYYFDDPAMRNYRQVY--AAVR 216 (281)
T ss_pred cceeeccccccchhhccc-cCcHhhcCCCc----cCcc-------hHHHHHHHHhcCccccccChhHhHHHHHH--HHhc
Confidence 00000000000 0000 0000 000000 0000 011112222222210 00001111222 2356
Q ss_pred CCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEe-CCCccccccccChHHHHHHHHHHHH
Q 040744 368 CPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNF-VSTPHVDHFRNDPKLYTTQLSQFLE 430 (440)
Q Consensus 368 ~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F-~~S~HV~H~R~~PeeY~~aV~~FL~ 430 (440)
+|++++-..+|+-+|+..++.+++--+.. .+++... +.-.-++|++-..+.......++|+
T Consensus 217 tPi~~~~~~DD~w~P~As~d~f~~~y~nA--pl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~ 278 (281)
T COG4757 217 TPITFSRALDDPWAPPASRDAFASFYRNA--PLEMRDLPRAEGPLGHMGYFREPFEALWKEMLG 278 (281)
T ss_pred CceeeeccCCCCcCCHHHHHHHHHhhhcC--cccceecCcccCcccchhhhccchHHHHHHHHH
Confidence 89999999999999999999999865543 2333333 2223577877776665555555554
No 111
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=95.21 E-value=0.75 Score=44.76 Aligned_cols=80 Identities=18% Similarity=0.193 Sum_probs=52.9
Q ss_pred CeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCceeecc-------------cchhhhHHHHHHHHHHHHHhhh
Q 040744 165 RTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQ-------------VGGKAEQNIELLVNHLADCLED 231 (440)
Q Consensus 165 ~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~-------------~g~k~~k~l~~l~~~i~~~l~~ 231 (440)
+-||++--|.|-+..++.--++.....||+|++.++=..+-.... ...+..+.+..++++ ++.
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~----lk~ 115 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKW----LKN 115 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHH----HHH
Confidence 578888889998877788889999999999999765222100000 001233444444444 444
Q ss_pred c--CCcEEEEEecccHHHH
Q 040744 232 E--GKNLVFHTFSNTGWLT 248 (440)
Q Consensus 232 ~--~~~Il~H~FSnGG~~~ 248 (440)
+ ...|.+-||-+||..+
T Consensus 116 ~g~~kkIGv~GfCwGak~v 134 (242)
T KOG3043|consen 116 HGDSKKIGVVGFCWGAKVV 134 (242)
T ss_pred cCCcceeeEEEEeecceEE
Confidence 4 7799999999998853
No 112
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=95.08 E-value=0.25 Score=47.75 Aligned_cols=108 Identities=17% Similarity=0.188 Sum_probs=61.2
Q ss_pred CCCeEEEEeeecCCchhhHHHHHHHHH--------HCCCeEEEEecCCCceeecccchh---hhHHHHHHHHHHHHHhh-
Q 040744 163 KSRTVVVLLGWLGAKQKHLRKYAEWYT--------SKGFHVITFTFPMAEILSYQVGGK---AEQNIELLVNHLADCLE- 230 (440)
Q Consensus 163 ~~~plVVLlGW~GA~~khl~KYa~iY~--------~~G~nVL~~~~p~~~il~~~~g~k---~~k~l~~l~~~i~~~l~- 230 (440)
++.|||++||=+|+- +.....+.... ...+++..+++.- .+....|.. ..+.+...++.|.+..+
T Consensus 3 ~g~pVlFIhG~~Gs~-~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~--~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~ 79 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSY-KQVRSLASELQRKALLNDNSSHFDFFTVDFNE--ELSAFHGRTLQRQAEFLAEAIKYILELYKS 79 (225)
T ss_pred CCCEEEEECcCCCCH-hHHHHHHHHHhhhhhhccCccceeEEEeccCc--cccccccccHHHHHHHHHHHHHHHHHhhhh
Confidence 457999999988864 45544433331 2245666666543 121112222 12233444444444331
Q ss_pred --hcCCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCC
Q 040744 231 --DEGKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVA 278 (440)
Q Consensus 231 --~~~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~ 278 (440)
...++|++=|.||||..+...+ . +. ......|+++|.=++|-.
T Consensus 80 ~~~~~~~vilVgHSmGGlvar~~l-~-~~---~~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 80 NRPPPRSVILVGHSMGGLVARSAL-S-LP---NYDPDSVKTIITLGTPHR 124 (225)
T ss_pred ccCCCCceEEEEEchhhHHHHHHH-h-cc---ccccccEEEEEEEcCCCC
Confidence 1278999999999998754333 2 11 112357999999888865
No 113
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=95.06 E-value=0.36 Score=53.18 Aligned_cols=63 Identities=17% Similarity=0.215 Sum_probs=57.4
Q ss_pred CEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHH
Q 040744 369 PQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLED 431 (440)
Q Consensus 369 P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~ 431 (440)
.-|.+||--|.=|.....-.++.+.-++|..-+.++|++-.|-=--....+-|..++..|+++
T Consensus 804 RLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 804 RLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred eEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 458899999999999999999999999999999999999999777777788999999999986
No 114
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.05 E-value=3.9 Score=40.27 Aligned_cols=228 Identities=16% Similarity=0.213 Sum_probs=114.5
Q ss_pred CCCeEEEEeeecCCchhhHHHHHHHHHHC-C-CeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhh-hc-CCcEEE
Q 040744 163 KSRTVVVLLGWLGAKQKHLRKYAEWYTSK-G-FHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLE-DE-GKNLVF 238 (440)
Q Consensus 163 ~~~plVVLlGW~GA~~khl~KYa~iY~~~-G-~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~-~~-~~~Il~ 238 (440)
..+.-++.+-+.|.....-..+.. ++ + +.++.+.+|-..- ..+.....+++.|++.|...+. -. .+|..|
T Consensus 5 ~~~~~L~cfP~AGGsa~~fr~W~~---~lp~~iel~avqlPGR~~---r~~ep~~~di~~Lad~la~el~~~~~d~P~al 78 (244)
T COG3208 5 GARLRLFCFPHAGGSASLFRSWSR---RLPADIELLAVQLPGRGD---RFGEPLLTDIESLADELANELLPPLLDAPFAL 78 (244)
T ss_pred CCCceEEEecCCCCCHHHHHHHHh---hCCchhheeeecCCCccc---ccCCcccccHHHHHHHHHHHhccccCCCCeee
Confidence 345566777788877544444333 22 3 4566666664211 1111122335666666665554 23 679999
Q ss_pred EEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCC--CCCCCChhhhhhhhhHHhhccccccccccccccccchhhhh
Q 040744 239 HTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSA--PVASPDPQVWASGFSAAFLKKNSVATKGIVYTNELETDELV 316 (440)
Q Consensus 239 H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSa--Pg~~~~~~~~a~gfsaa~l~~~s~~~~~~~~~~~~~l~~~v 316 (440)
.|+||||..+|. ++..+++.+. .+.++++=++ |.....+.. ...=.+.++.. +.-+-
T Consensus 79 fGHSmGa~lAfE-vArrl~~~g~----~p~~lfisg~~aP~~~~~~~i-~~~~D~~~l~~---------------l~~lg 137 (244)
T COG3208 79 FGHSMGAMLAFE-VARRLERAGL----PPRALFISGCRAPHYDRGKQI-HHLDDADFLAD---------------LVDLG 137 (244)
T ss_pred cccchhHHHHHH-HHHHHHHcCC----CcceEEEecCCCCCCcccCCc-cCCCHHHHHHH---------------HHHhC
Confidence 999999998764 5555665432 2455555443 322211110 00000111110 00000
Q ss_pred ccc-cCCCCCchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcccCCCCCCEEEEEcCCCCccCHHHHHHHHHHHHH
Q 040744 317 GSR-ASGEPKPAVTETALLVVLEKFFEVILHLPAVNRRLSDVLGLLSSGQPACPQLYIYSSADRVIPAESVESFIEEQRK 395 (440)
Q Consensus 317 ~~~-~~~~p~~~~~~~~ll~~l~~~f~~~~~~p~~~~rl~~~~~~l~~~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~ 395 (440)
|.. .+.+ .+-+ ...++.+++.-|...- .|. .-...+..||+..+-|+.|..|.++++.+--+..+
T Consensus 138 G~p~e~le-d~El-~~l~LPilRAD~~~~e----------~Y~-~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~- 203 (244)
T COG3208 138 GTPPELLE-DPEL-MALFLPILRADFRALE----------SYR-YPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTK- 203 (244)
T ss_pred CCChHHhc-CHHH-HHHHHHHHHHHHHHhc----------ccc-cCCCCCcCcceEEeccCcchhccHHHHHHHHHhhc-
Confidence 000 0000 0111 1122333332222111 111 11235678999999999999999998877665443
Q ss_pred cCCceEEEEeCCCccccccccChHHHHHHHHHHHHHHHhh
Q 040744 396 AGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDYVVT 435 (440)
Q Consensus 396 ~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~~~~ 435 (440)
.+.+...|+| .|- .+....++-.+.+.+.|..-...
T Consensus 204 --~~f~l~~fdG-gHF-fl~~~~~~v~~~i~~~l~~~~~~ 239 (244)
T COG3208 204 --GDFTLRVFDG-GHF-FLNQQREEVLARLEQHLAHHQVR 239 (244)
T ss_pred --CCceEEEecC-cce-ehhhhHHHHHHHHHHHhhhhhhh
Confidence 2467888865 342 34555677777777777644333
No 115
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=94.91 E-value=0.19 Score=47.14 Aligned_cols=102 Identities=17% Similarity=0.239 Sum_probs=56.1
Q ss_pred CeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhh-c-CCcEEEEEec
Q 040744 165 RTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLED-E-GKNLVFHTFS 242 (440)
Q Consensus 165 ~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~-~-~~~Il~H~FS 242 (440)
+||+++|+=+|+-. .-...++...+.++.|..+..|... .+......++.+++...+.+.. . .+|+++-|+|
T Consensus 1 ~~lf~~p~~gG~~~-~y~~la~~l~~~~~~v~~i~~~~~~-----~~~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S 74 (229)
T PF00975_consen 1 RPLFCFPPAGGSAS-SYRPLARALPDDVIGVYGIEYPGRG-----DDEPPPDSIEELASRYAEAIRARQPEGPYVLAGWS 74 (229)
T ss_dssp -EEEEESSTTCSGG-GGHHHHHHHTTTEEEEEEECSTTSC-----TTSHEESSHHHHHHHHHHHHHHHTSSSSEEEEEET
T ss_pred CeEEEEcCCccCHH-HHHHHHHhCCCCeEEEEEEecCCCC-----CCCCCCCCHHHHHHHHHHHhhhhCCCCCeeehccC
Confidence 58999999888543 2344455444434556666665432 0111111223333333333333 2 4599999999
Q ss_pred ccHHHHHHHHHHHHhhcCCCCccCce-EEEecCCCC
Q 040744 243 NTGWLTYGAILEKFQNKDPSLMGRIR-GCIVDSAPV 277 (440)
Q Consensus 243 nGG~~~~~~Ll~~l~~~~~~l~~~Vk-G~I~DSaPg 277 (440)
.||..++. ++..|.+.+ ..|. -+++|+.|-
T Consensus 75 ~Gg~lA~E-~A~~Le~~G----~~v~~l~liD~~~p 105 (229)
T PF00975_consen 75 FGGILAFE-MARQLEEAG----EEVSRLILIDSPPP 105 (229)
T ss_dssp HHHHHHHH-HHHHHHHTT-----SESEEEEESCSST
T ss_pred ccHHHHHH-HHHHHHHhh----hccCceEEecCCCC
Confidence 99998764 555566543 2344 357898643
No 116
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=94.86 E-value=0.5 Score=45.26 Aligned_cols=60 Identities=18% Similarity=0.244 Sum_probs=43.3
Q ss_pred CCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHH
Q 040744 367 ACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLED 431 (440)
Q Consensus 367 ~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~ 431 (440)
..|++..|+++|++||.+--++..+..+..|..++-.-|++ .+|.-. |+| .+.+..|+++
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g---~~h~~~-~~e-~~~~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPG---LGHSTS-PQE-LDDLKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCC---cccccc-HHH-HHHHHHHHHH
Confidence 46889999999999999999999998888887644444454 444433 333 3566666665
No 117
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=94.83 E-value=0.051 Score=56.53 Aligned_cols=107 Identities=18% Similarity=0.187 Sum_probs=54.5
Q ss_pred CCCCeEEEEeeecCCchhhH-----------------HHHHHHHHHCCCeEEEEecCCC-ce--eec-ccchh-----hh
Q 040744 162 MKSRTVVVLLGWLGAKQKHL-----------------RKYAEWYTSKGFHVITFTFPMA-EI--LSY-QVGGK-----AE 215 (440)
Q Consensus 162 ~~~~plVVLlGW~GA~~khl-----------------~KYa~iY~~~G~nVL~~~~p~~-~i--l~~-~~g~k-----~~ 215 (440)
++.+.|+++||=.+.+++-+ .-|+..+.++||.||.++.... +- ... ..+.. ..
T Consensus 113 ~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la 192 (390)
T PF12715_consen 113 GPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALA 192 (390)
T ss_dssp S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHH
T ss_pred CCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHH
Confidence 34567888999776664422 1257788999999999988642 10 000 00000 00
Q ss_pred H------------HHHHHHHHHHHHhhhc----CCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCC
Q 040744 216 Q------------NIELLVNHLADCLEDE----GKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVA 278 (440)
Q Consensus 216 k------------~l~~l~~~i~~~l~~~----~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~ 278 (440)
. ...+.+. ..||++.. +++|.+-||||||..++ ++.+|. ++|++.|.=++.+.
T Consensus 193 ~~~l~lG~S~~G~~~~ddmr-~lDfL~slpeVD~~RIG~~GfSmGg~~a~--~LaALD-------dRIka~v~~~~l~~ 261 (390)
T PF12715_consen 193 RNLLMLGRSLAGLMAWDDMR-ALDFLASLPEVDPDRIGCMGFSMGGYRAW--WLAALD-------DRIKATVANGYLCT 261 (390)
T ss_dssp HHHHHTT--HHHHHHHHHHH-HHHHHCT-TTEEEEEEEEEEEGGGHHHHH--HHHHH--------TT--EEEEES-B--
T ss_pred HHHHHcCcCHHHHHHHHHHH-HHHHHhcCcccCccceEEEeecccHHHHH--HHHHcc-------hhhHhHhhhhhhhc
Confidence 0 0011111 22555432 78999999999999775 455554 58999988776654
No 118
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=94.64 E-value=3.3 Score=42.37 Aligned_cols=106 Identities=17% Similarity=0.161 Sum_probs=61.1
Q ss_pred CCCCeEEEEeeecCCchhhHHHH-HHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhc-CCcEEEE
Q 040744 162 MKSRTVVVLLGWLGAKQKHLRKY-AEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDE-GKNLVFH 239 (440)
Q Consensus 162 ~~~~plVVLlGW~GA~~khl~KY-a~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~-~~~Il~H 239 (440)
++.+.++++||.=-.. +.-+| ......+||.|+.++.+--.. +-..-...+..+..+.+.+..+++.- .+.+.+-
T Consensus 42 ~~gP~illlHGfPe~w--yswr~q~~~la~~~~rviA~DlrGyG~-Sd~P~~~~~Yt~~~l~~di~~lld~Lg~~k~~lv 118 (322)
T KOG4178|consen 42 GDGPIVLLLHGFPESW--YSWRHQIPGLASRGYRVIAPDLRGYGF-SDAPPHISEYTIDELVGDIVALLDHLGLKKAFLV 118 (322)
T ss_pred CCCCEEEEEccCCccc--hhhhhhhhhhhhcceEEEecCCCCCCC-CCCCCCcceeeHHHHHHHHHHHHHHhccceeEEE
Confidence 4557788899976543 33333 677888999999998863110 00000001111122222222222221 5789999
Q ss_pred EecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCC
Q 040744 240 TFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVA 278 (440)
Q Consensus 240 ~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~ 278 (440)
++.+||..++. ++. + .+++|+|+|.=|.|..
T Consensus 119 gHDwGaivaw~-la~-~------~Perv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 119 GHDWGAIVAWR-LAL-F------YPERVDGLVTLNVPFP 149 (322)
T ss_pred eccchhHHHHH-HHH-h------ChhhcceEEEecCCCC
Confidence 99999997653 221 1 2468899988887766
No 119
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=94.38 E-value=0.29 Score=46.86 Aligned_cols=88 Identities=15% Similarity=0.184 Sum_probs=47.7
Q ss_pred CCeEEEEeeecCCchhhHHHHHHHHHHC--CC---eEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhc---CCc
Q 040744 164 SRTVVVLLGWLGAKQKHLRKYAEWYTSK--GF---HVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDE---GKN 235 (440)
Q Consensus 164 ~~plVVLlGW~GA~~khl~KYa~iY~~~--G~---nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~---~~~ 235 (440)
..-||++||..|+ +.++....+..... .+ .++.+.+.... ..+....+...+.++++|.+.++.. ..+
T Consensus 4 ~hLvV~vHGL~G~-~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~---~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~ 79 (217)
T PF05057_consen 4 VHLVVFVHGLWGN-PADMRYLKNHLEKIPEDLPNARIVVLGYSNNE---FKTFDGIDVCGERLAEEILEHIKDYESKIRK 79 (217)
T ss_pred CEEEEEeCCCCCC-HHHHHHHHHHHHHhhhhcchhhhhhhcccccc---cccchhhHHHHHHHHHHHHHhcccccccccc
Confidence 4568999999997 46665554444441 11 12221111110 0111112223345566665555443 368
Q ss_pred EEEEEecccHHHHHHHHHHH
Q 040744 236 LVFHTFSNTGWLTYGAILEK 255 (440)
Q Consensus 236 Il~H~FSnGG~~~~~~Ll~~ 255 (440)
|.|=|.||||-.+-..|...
T Consensus 80 IsfIgHSLGGli~r~al~~~ 99 (217)
T PF05057_consen 80 ISFIGHSLGGLIARYALGLL 99 (217)
T ss_pred ceEEEecccHHHHHHHHHHh
Confidence 99999999999875545443
No 120
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=94.37 E-value=0.95 Score=44.83 Aligned_cols=63 Identities=17% Similarity=0.215 Sum_probs=44.3
Q ss_pred CCCCEEEEEcC------CCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccCh-HHHHHHHHHHH
Q 040744 366 PACPQLYIYSS------ADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDP-KLYTTQLSQFL 429 (440)
Q Consensus 366 ~~~P~LYIYS~------aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~P-eeY~~aV~~FL 429 (440)
.....|=|||. .|-.||...++.+--.-+.+....++..+.| ++..|-+.|. .+=.+.|.+||
T Consensus 183 ~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G-~~a~HS~LheN~~V~~~I~~FL 252 (255)
T PF06028_consen 183 KNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTG-KDAQHSQLHENPQVDKLIIQFL 252 (255)
T ss_dssp TT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEES-GGGSCCGGGCCHHHHHHHHHHH
T ss_pred CCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEEC-CCCccccCCCCHHHHHHHHHHh
Confidence 34567889998 9999999999988777676666778888865 3566666653 22335566665
No 121
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=94.12 E-value=0.29 Score=55.60 Aligned_cols=39 Identities=23% Similarity=0.324 Sum_probs=32.0
Q ss_pred CCCeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCC
Q 040744 163 KSRTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPM 202 (440)
Q Consensus 163 ~~~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~ 202 (440)
..++||++|||.+.+. ....+++.+.+.||.|+.++.|.
T Consensus 448 g~P~VVllHG~~g~~~-~~~~lA~~La~~Gy~VIaiDlpG 486 (792)
T TIGR03502 448 GWPVVIYQHGITGAKE-NALAFAGTLAAAGVATIAIDHPL 486 (792)
T ss_pred CCcEEEEeCCCCCCHH-HHHHHHHHHHhCCcEEEEeCCCC
Confidence 3468999999999874 56677888888999999999874
No 122
>COG4099 Predicted peptidase [General function prediction only]
Probab=93.72 E-value=1.1 Score=45.54 Aligned_cols=39 Identities=28% Similarity=0.425 Sum_probs=29.2
Q ss_pred CCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeC
Q 040744 368 CPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFV 406 (440)
Q Consensus 368 ~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~ 406 (440)
.|.-++||.+|.++|-++..-.+++.+..+.+|+-.-|.
T Consensus 316 ~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~ 354 (387)
T COG4099 316 APIWVFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFL 354 (387)
T ss_pred CceEEEEecCCCccccCcceeehHHHHhhccccchhhhh
Confidence 588899999999999998777777666555555544443
No 123
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=92.84 E-value=0.14 Score=49.24 Aligned_cols=63 Identities=21% Similarity=0.201 Sum_probs=50.7
Q ss_pred CCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHH
Q 040744 364 GQPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLED 431 (440)
Q Consensus 364 ~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~ 431 (440)
.+.+||.|++||+.|++|+...|.=+ ... ..+ -+.+.++...|--|+| +++++.+.|.+|+++
T Consensus 213 p~vkcPtli~hG~kDp~~~~~hv~fi-~~~-~~~--a~~~~~peGkHn~hLr-ya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 213 PQVKCPTLIMHGGKDPFCGDPHVCFI-PVL-KSL--AKVEIHPEGKHNFHLR-YAKEFNKLVLDFLKS 275 (277)
T ss_pred ccccCCeeEeeCCcCCCCCCCCccch-hhh-ccc--ceEEEccCCCcceeee-chHHHHHHHHHHHhc
Confidence 56789999999999999998877533 322 222 3578899999999887 689999999999986
No 124
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=92.55 E-value=11 Score=38.14 Aligned_cols=99 Identities=16% Similarity=0.167 Sum_probs=59.5
Q ss_pred eEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCceeecccc--hhhhHHHHHHHHHHHHHhhh-c-CCcEEEEEe
Q 040744 166 TVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVG--GKAEQNIELLVNHLADCLED-E-GKNLVFHTF 241 (440)
Q Consensus 166 plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g--~k~~k~l~~l~~~i~~~l~~-~-~~~Il~H~F 241 (440)
+||=+||==|+. ....--.....+.|..++.+.+|-.....-..+ ...+. ..+++..++++ + .+.+++-|.
T Consensus 37 TVv~~hGsPGSH-~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~e----r~~~~~~ll~~l~i~~~~i~~gH 111 (297)
T PF06342_consen 37 TVVAFHGSPGSH-NDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEE----RQNFVNALLDELGIKGKLIFLGH 111 (297)
T ss_pred eEEEecCCCCCc-cchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHH----HHHHHHHHHHHcCCCCceEEEEe
Confidence 677799988865 334333677889999999999985322110010 01111 11222222222 2 689999999
Q ss_pred cccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCC
Q 040744 242 SNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVAS 279 (440)
Q Consensus 242 SnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~ 279 (440)
|.|+-.++. +... .+..|+++=+.||..
T Consensus 112 SrGcenal~-----la~~-----~~~~g~~lin~~G~r 139 (297)
T PF06342_consen 112 SRGCENALQ-----LAVT-----HPLHGLVLINPPGLR 139 (297)
T ss_pred ccchHHHHH-----HHhc-----CccceEEEecCCccc
Confidence 999987631 1111 246799999988864
No 125
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=92.48 E-value=15 Score=38.00 Aligned_cols=225 Identities=16% Similarity=0.167 Sum_probs=113.9
Q ss_pred CCCeEEEEeeecCCch-hhHHHH----HHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHH--Hhhh--cC
Q 040744 163 KSRTVVVLLGWLGAKQ-KHLRKY----AEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLAD--CLED--EG 233 (440)
Q Consensus 163 ~~~plVVLlGW~GA~~-khl~KY----a~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~--~l~~--~~ 233 (440)
..+-+|..||=+.+-. ....-| ..+=.+.++.||.++++.+..--+... . .+.-..+.|+.+ |++. +.
T Consensus 89 ~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa~--y-~D~~~Al~w~~~~~~~~~~~D~ 165 (336)
T KOG1515|consen 89 KLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPAA--Y-DDGWAALKWVLKNSWLKLGADP 165 (336)
T ss_pred CceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCcc--c-hHHHHHHHHHHHhHHHHhCCCc
Confidence 4456777998222111 124444 233356788999999986532111111 1 111223334433 3333 36
Q ss_pred CcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhhhhhhHHhhccccccccccccccccchh
Q 040744 234 KNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWASGFSAAFLKKNSVATKGIVYTNELETD 313 (440)
Q Consensus 234 ~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~gfsaa~l~~~s~~~~~~~~~~~~~l~ 313 (440)
+++++-|=|.||-++..--+.+.++. .....|+|+|+=-..-...+.+. ...+ .+.
T Consensus 166 ~rv~l~GDSaGGNia~~va~r~~~~~--~~~~ki~g~ili~P~~~~~~~~~--~e~~-~~~------------------- 221 (336)
T KOG1515|consen 166 SRVFLAGDSAGGNIAHVVAQRAADEK--LSKPKIKGQILIYPFFQGTDRTE--SEKQ-QNL------------------- 221 (336)
T ss_pred ccEEEEccCccHHHHHHHHHHHhhcc--CCCcceEEEEEEecccCCCCCCC--HHHH-Hhh-------------------
Confidence 78999999999998654333333222 23468999999874433211110 0000 000
Q ss_pred hhhccccCCCCCchHHHHHHHHHHHHHHHHHhhhhhhh-hh---hhhhhh-hc---ccCCCCCCEEEEEcCCCCccCHHH
Q 040744 314 ELVGSRASGEPKPAVTETALLVVLEKFFEVILHLPAVN-RR---LSDVLG-LL---SSGQPACPQLYIYSSADRVIPAES 385 (440)
Q Consensus 314 ~~v~~~~~~~p~~~~~~~~ll~~l~~~f~~~~~~p~~~-~r---l~~~~~-~l---~~~~~~~P~LYIYS~aD~lIP~~d 385 (440)
.. .+.... ....+++... .|.-. .+ ...... .. .....-.|.|.+-...|.+. ++
T Consensus 222 ---~~------~~~~~~----~~~~~~w~~~--lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D~ 284 (336)
T KOG1515|consen 222 ---NG------SPELAR----PKIDKWWRLL--LPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--DE 284 (336)
T ss_pred ---cC------CcchhH----HHHHHHHHHh--CCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhh--hh
Confidence 00 000000 1122233211 12100 00 001111 00 01222235788888888887 55
Q ss_pred HHHHHHHHHHcCCceEEEEeCCCccccccccCh----HHHHHHHHHHHHH
Q 040744 386 VESFIEEQRKAGREVRACNFVSTPHVDHFRNDP----KLYTTQLSQFLED 431 (440)
Q Consensus 386 VE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~P----eeY~~aV~~FL~~ 431 (440)
--.++++.++.|++|+...+++..|+.|....- .+=.+++.+|+++
T Consensus 285 ~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~ 334 (336)
T KOG1515|consen 285 GLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKS 334 (336)
T ss_pred hHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhh
Confidence 666778889999999988899999999998774 3333445555543
No 126
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=91.76 E-value=0.79 Score=44.96 Aligned_cols=107 Identities=8% Similarity=-0.009 Sum_probs=61.0
Q ss_pred CCCeEEEEeeecCCch-hhHHHH--H------HHHHHCCCeEEEEecCCC---ceeecccchhhhHHHHHHHHHHHHHhh
Q 040744 163 KSRTVVVLLGWLGAKQ-KHLRKY--A------EWYTSKGFHVITFTFPMA---EILSYQVGGKAEQNIELLVNHLADCLE 230 (440)
Q Consensus 163 ~~~plVVLlGW~GA~~-khl~KY--a------~iY~~~G~nVL~~~~p~~---~il~~~~g~k~~k~l~~l~~~i~~~l~ 230 (440)
+-+.|++.++|..... ...... . +.|.++||.||+++.+-. +-.....+....++..++++||. +
T Consensus 19 ~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~~---~ 95 (272)
T PF02129_consen 19 PFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMSPNEAQDGYDTIEWIA---A 95 (272)
T ss_dssp SEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTSHHHHHHHHHHHHHHH---H
T ss_pred cccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCChhHHHHHHHHHHHHH---h
Confidence 3456777788886431 111111 1 129999999999998731 11111113333444555555554 2
Q ss_pred hc--CCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCC
Q 040744 231 DE--GKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASP 280 (440)
Q Consensus 231 ~~--~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~ 280 (440)
+. +.+|...|.|-+|.+.+. .+. + .++.+|++|--++..+..
T Consensus 96 Qpws~G~VGm~G~SY~G~~q~~---~A~-~----~~p~LkAi~p~~~~~d~~ 139 (272)
T PF02129_consen 96 QPWSNGKVGMYGISYGGFTQWA---AAA-R----RPPHLKAIVPQSGWSDLY 139 (272)
T ss_dssp CTTEEEEEEEEEETHHHHHHHH---HHT-T----T-TTEEEEEEESE-SBTC
T ss_pred CCCCCCeEEeeccCHHHHHHHH---HHh-c----CCCCceEEEecccCCccc
Confidence 33 779999999999998752 222 1 236889999988877653
No 127
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=91.18 E-value=8.6 Score=36.01 Aligned_cols=106 Identities=16% Similarity=0.181 Sum_probs=65.0
Q ss_pred CCeEEEEeeecCCchhh-HHHHHHHHHHCCCeEEEEecCCCce--ee---cccchhhhHHHHHHHHHHHHHhhhc-CCcE
Q 040744 164 SRTVVVLLGWLGAKQKH-LRKYAEWYTSKGFHVITFTFPMAEI--LS---YQVGGKAEQNIELLVNHLADCLEDE-GKNL 236 (440)
Q Consensus 164 ~~plVVLlGW~GA~~kh-l~KYa~iY~~~G~nVL~~~~p~~~i--l~---~~~g~k~~k~l~~l~~~i~~~l~~~-~~~I 236 (440)
+-+||+-||=+++.+.- |..-++.+..+|+-|.+|.+|+-.- -. +..+.. ......+..+++....- ..++
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~--t~~~~~~~~~aql~~~l~~gpL 91 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSG--TLNPEYIVAIAQLRAGLAEGPL 91 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccc--cCCHHHHHHHHHHHhcccCCce
Confidence 34677788988777655 8888999999999999999985211 01 111111 00111222233332222 6799
Q ss_pred EEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCC
Q 040744 237 VFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVAS 279 (440)
Q Consensus 237 l~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~ 279 (440)
++=|-||||-.+ +.+.+.++ -+|.|+++=+-|..+
T Consensus 92 i~GGkSmGGR~a-Smvade~~-------A~i~~L~clgYPfhp 126 (213)
T COG3571 92 IIGGKSMGGRVA-SMVADELQ-------APIDGLVCLGYPFHP 126 (213)
T ss_pred eeccccccchHH-HHHHHhhc-------CCcceEEEecCccCC
Confidence 999999999864 33444443 247888876656543
No 128
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=90.83 E-value=1 Score=49.33 Aligned_cols=212 Identities=14% Similarity=0.126 Sum_probs=120.6
Q ss_pred EEeeecCCchhhHHHH---HHHHHHCCCeEEEEecCCCceeeccc-----chhhhHHHHHHHHHHHHHhhhc---CCcEE
Q 040744 169 VLLGWLGAKQKHLRKY---AEWYTSKGFHVITFTFPMAEILSYQV-----GGKAEQNIELLVNHLADCLEDE---GKNLV 237 (440)
Q Consensus 169 VLlGW~GA~~khl~KY---a~iY~~~G~nVL~~~~p~~~il~~~~-----g~k~~k~l~~l~~~i~~~l~~~---~~~Il 237 (440)
+|+||+|=.--....| ...|-++|-.-++-..+-...+.+.| +.+.++..++.+....+.+++. +..|-
T Consensus 424 ll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lg 503 (648)
T COG1505 424 LLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLG 503 (648)
T ss_pred EEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhh
Confidence 4688888332223333 37889999877776565544444332 2223445667766666666555 67999
Q ss_pred EEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhhhhhhHHhhccccccccccccccccchhhhhc
Q 040744 238 FHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWASGFSAAFLKKNSVATKGIVYTNELETDELVG 317 (440)
Q Consensus 238 ~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~gfsaa~l~~~s~~~~~~~~~~~~~l~~~v~ 317 (440)
+.|=||||-++-.. | ++.++ -..++|.+..-.+.. ++..+. .|..+ +. -+|
T Consensus 504 i~GgSNGGLLvg~a----l-TQrPe---lfgA~v~evPllDMl---------RYh~l~------aG~sW-----~~-EYG 554 (648)
T COG1505 504 IQGGSNGGLLVGAA----L-TQRPE---LFGAAVCEVPLLDML---------RYHLLT------AGSSW-----IA-EYG 554 (648)
T ss_pred hccCCCCceEEEee----e-ccChh---hhCceeeccchhhhh---------hhcccc------cchhh-----Hh-hcC
Confidence 99999999865321 2 33343 345777777333321 111111 11111 10 012
Q ss_pred cccCCCCCchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcccCCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcC
Q 040744 318 SRASGEPKPAVTETALLVVLEKFFEVILHLPAVNRRLSDVLGLLSSGQPACPQLYIYSSADRVIPAESVESFIEEQRKAG 397 (440)
Q Consensus 318 ~~~~~~p~~~~~~~~ll~~l~~~f~~~~~~p~~~~rl~~~~~~l~~~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G 397 (440)
.+.. |.- .. .+.+ ..+.+.++..+.--|.|+--|..|+-|.+.+...|+.+.++.|
T Consensus 555 ~Pd~----P~d-~~----~l~~---------------YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~ 610 (648)
T COG1505 555 NPDD----PED-RA----FLLA---------------YSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVG 610 (648)
T ss_pred CCCC----HHH-HH----HHHh---------------cCchhcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcC
Confidence 2211 110 00 1111 1122333333332366777788888888889999999989998
Q ss_pred CceEEEEeCCCccccccccCh-HHHHHHHHHHHHHHH
Q 040744 398 REVRACNFVSTPHVDHFRNDP-KLYTTQLSQFLEDYV 433 (440)
Q Consensus 398 ~~V~~~~F~~S~HV~H~R~~P-eeY~~aV~~FL~~~~ 433 (440)
.+|-...=.+++|-+---.-+ .+++.-+.-||.+..
T Consensus 611 ~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 611 APVLLREETKGGHGGAAPTAEIARELADLLAFLLRTL 647 (648)
T ss_pred CceEEEeecCCcccCCCChHHHHHHHHHHHHHHHHhh
Confidence 776555557889988766555 678888888887653
No 129
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=90.32 E-value=2.1 Score=43.19 Aligned_cols=86 Identities=9% Similarity=0.039 Sum_probs=51.5
Q ss_pred CCCCeEEEEeeecCCchhhHHHHH-HHHHHCCCeEEEEecCC-Cceeecc-cchhhhHHHHHHHHHHHHHhhhcCCcEEE
Q 040744 162 MKSRTVVVLLGWLGAKQKHLRKYA-EWYTSKGFHVITFTFPM-AEILSYQ-VGGKAEQNIELLVNHLADCLEDEGKNLVF 238 (440)
Q Consensus 162 ~~~~plVVLlGW~GA~~khl~KYa-~iY~~~G~nVL~~~~p~-~~il~~~-~g~k~~k~l~~l~~~i~~~l~~~~~~Il~ 238 (440)
...+-++++||-+-+- ---+-++ ++-.+.-+.++.++.+- .+.-... -....+...+++.+.+..+..+...+|++
T Consensus 72 t~gpil~l~HG~G~S~-LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iil 150 (343)
T KOG2564|consen 72 TEGPILLLLHGGGSSA-LSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIIL 150 (343)
T ss_pred CCccEEEEeecCcccc-hhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEE
Confidence 3456788888854433 2344443 44555677788888774 2211100 00123334456666665566666889999
Q ss_pred EEecccHHHH
Q 040744 239 HTFSNTGWLT 248 (440)
Q Consensus 239 H~FSnGG~~~ 248 (440)
-|.||||+.+
T Consensus 151 VGHSmGGaIa 160 (343)
T KOG2564|consen 151 VGHSMGGAIA 160 (343)
T ss_pred Eeccccchhh
Confidence 9999999987
No 130
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=89.45 E-value=1.3 Score=46.98 Aligned_cols=127 Identities=15% Similarity=0.137 Sum_probs=69.6
Q ss_pred CCCCCce-eeecCCCCccccCCCCCcCCCCCCeEEEEee----ecCCchhhHHHHHHHHHHCC-CeEEEEecCCCce--e
Q 040744 135 SYSDVLY-RWHLPETDAIDVSGTSDCLAMKSRTVVVLLG----WLGAKQKHLRKYAEWYTSKG-FHVITFTFPMAEI--L 206 (440)
Q Consensus 135 ~~~~~~y-~~~~p~~~~~~~~~~~~~~~~~~~plVVLlG----W~GA~~khl~KYa~iY~~~G-~nVL~~~~p~~~i--l 206 (440)
.++|=+| +|--|+.... ..+.+-+|.+|| ++... .. -+..+..+.+ +.|+++.++.... +
T Consensus 74 ~sEdcl~l~i~~p~~~~~---------~~~~pv~v~ihGG~~~~g~~~-~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~ 141 (493)
T cd00312 74 GSEDCLYLNVYTPKNTKP---------GNSLPVMVWIHGGGFMFGSGS-LY--PGDGLAREGDNVIVVSINYRLGVLGFL 141 (493)
T ss_pred CCCcCCeEEEEeCCCCCC---------CCCCCEEEEEcCCccccCCCC-CC--ChHHHHhcCCCEEEEEecccccccccc
Confidence 4677777 7777753211 133456888999 44333 22 1222222333 7777777775321 1
Q ss_pred ec----ccchhhhHHHHHHHHHHHHHhhh---cCCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCC
Q 040744 207 SY----QVGGKAEQNIELLVNHLADCLED---EGKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVAS 279 (440)
Q Consensus 207 ~~----~~g~k~~k~l~~l~~~i~~~l~~---~~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~ 279 (440)
.. ..|.....+...+++|+.+.++. ++++|.+.|+|-||..+...++. . .....+++.|+.|++...
T Consensus 142 ~~~~~~~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~---~---~~~~lf~~~i~~sg~~~~ 215 (493)
T cd00312 142 STGDIELPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLS---P---DSKGLFHRAISQSGSALS 215 (493)
T ss_pred cCCCCCCCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhC---c---chhHHHHHHhhhcCCccC
Confidence 10 11111233445666666654433 47899999999999977543321 1 112346788888876543
No 131
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=89.14 E-value=1 Score=43.59 Aligned_cols=188 Identities=16% Similarity=0.180 Sum_probs=107.3
Q ss_pred CCCCeEEEEee--ecCCchhhHHHHHHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHH---HHHHHHhhhcCCcE
Q 040744 162 MKSRTVVVLLG--WLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLV---NHLADCLEDEGKNL 236 (440)
Q Consensus 162 ~~~~plVVLlG--W~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~---~~i~~~l~~~~~~I 236 (440)
+..|-.|++|| |.-...|.-..-+..-.++||.|..+.+....- +...++.+.+.. ++|.++.+ +.+.|
T Consensus 65 ~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q-----~htL~qt~~~~~~gv~filk~~~-n~k~l 138 (270)
T KOG4627|consen 65 NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQ-----VHTLEQTMTQFTHGVNFILKYTE-NTKVL 138 (270)
T ss_pred CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCcc-----cccHHHHHHHHHHHHHHHHHhcc-cceeE
Confidence 45578999998 544343444444667789999999988765321 112334444444 34444332 35569
Q ss_pred EEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhhhhhhHHhhccccccccccccccccchhhhh
Q 040744 237 VFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWASGFSAAFLKKNSVATKGIVYTNELETDELV 316 (440)
Q Consensus 237 l~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~gfsaa~l~~~s~~~~~~~~~~~~~l~~~v 316 (440)
+|-|.|.|+-+++..+.. .++ ++|.|.|+=|+-=.. . .+.. ..+ + ..+
T Consensus 139 ~~gGHSaGAHLa~qav~R---~r~----prI~gl~l~~GvY~l--~---------EL~~--------te~----g--~dl 186 (270)
T KOG4627|consen 139 TFGGHSAGAHLAAQAVMR---QRS----PRIWGLILLCGVYDL--R---------ELSN--------TES----G--NDL 186 (270)
T ss_pred EEcccchHHHHHHHHHHH---hcC----chHHHHHHHhhHhhH--H---------HHhC--------Ccc----c--ccc
Confidence 999999999987654433 222 588899887754321 0 1000 000 0 001
Q ss_pred ccccCCCCCchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcccCCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHc
Q 040744 317 GSRASGEPKPAVTETALLVVLEKFFEVILHLPAVNRRLSDVLGLLSSGQPACPQLYIYSSADRVIPAESVESFIEEQRKA 396 (440)
Q Consensus 317 ~~~~~~~p~~~~~~~~ll~~l~~~f~~~~~~p~~~~rl~~~~~~l~~~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~ 396 (440)
++.. +. .-...+ +.+. -+..+.|.|.+.+..|.---.+.-.+|++.+++.
T Consensus 187 gLt~----~~----------------ae~~Sc-------dl~~---~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a 236 (270)
T KOG4627|consen 187 GLTE----RN----------------AESVSC-------DLWE---YTDVTVWILVVAAEHESPKLIEQNRDFADQLRKA 236 (270)
T ss_pred Cccc----ch----------------hhhcCc-------cHHH---hcCceeeeeEeeecccCcHHHHhhhhHHHHhhhc
Confidence 1100 00 000111 2221 1234568999999999877778888888877653
Q ss_pred CCceEEEEeCCCccccccc----cChHHH
Q 040744 397 GREVRACNFVSTPHVDHFR----NDPKLY 421 (440)
Q Consensus 397 G~~V~~~~F~~S~HV~H~R----~~PeeY 421 (440)
+-..|+++.|-..+- ++-++|
T Consensus 237 ----~~~~f~n~~hy~I~~~~~~~~s~~~ 261 (270)
T KOG4627|consen 237 ----SFTLFKNYDHYDIIEETAIDDSDVS 261 (270)
T ss_pred ----ceeecCCcchhhHHHHhccccchHH
Confidence 456799999977654 345555
No 132
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=89.08 E-value=1.2 Score=37.57 Aligned_cols=60 Identities=20% Similarity=0.216 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHH
Q 040744 367 ACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLED 431 (440)
Q Consensus 367 ~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~ 431 (440)
..|.|+|-++.|.+.|++..+++.+.... -+.+.+++..|..+....+-- .++|.+||.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~----s~lvt~~g~gHg~~~~~s~C~-~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG----SRLVTVDGAGHGVYAGGSPCV-DKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC----ceEEEEeccCcceecCCChHH-HHHHHHHHHc
Confidence 47999999999999999999999876432 468889999999998666655 4777788764
No 133
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=85.70 E-value=7.5 Score=39.46 Aligned_cols=106 Identities=13% Similarity=0.147 Sum_probs=63.5
Q ss_pred CCeEEEEeeecCCc--hhhHHHHHHHHHHCCCeEEEEecCCC--c---eee------cccch------------------
Q 040744 164 SRTVVVLLGWLGAK--QKHLRKYAEWYTSKGFHVITFTFPMA--E---ILS------YQVGG------------------ 212 (440)
Q Consensus 164 ~~plVVLlGW~GA~--~khl~KYa~iY~~~G~nVL~~~~p~~--~---il~------~~~g~------------------ 212 (440)
.-.|||||||...- +..+..-.+...+.|+++|..+.|.- . .+. ...+.
T Consensus 87 ~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 166 (310)
T PF12048_consen 87 QGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEA 166 (310)
T ss_pred ceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHh
Confidence 34799999999854 46677778888999999999988751 1 000 00000
Q ss_pred ----hhhHHHHHHHHHHHHHhhhc-CCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCC
Q 040744 213 ----KAEQNIELLVNHLADCLEDE-GKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAP 276 (440)
Q Consensus 213 ----k~~k~l~~l~~~i~~~l~~~-~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaP 276 (440)
..+..+..-++.+..++++. ..+|++=|+.+|++++...+ .+.. ...+.++|+=+++
T Consensus 167 ~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~l----a~~~---~~~~daLV~I~a~ 228 (310)
T PF12048_consen 167 EAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYL----AEKP---PPMPDALVLINAY 228 (310)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHH----hcCC---CcccCeEEEEeCC
Confidence 00112222233333455555 45599999999999875433 3221 1346677766644
No 134
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=85.12 E-value=9 Score=38.12 Aligned_cols=106 Identities=22% Similarity=0.241 Sum_probs=61.1
Q ss_pred CeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhh--------cCCcE
Q 040744 165 RTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLED--------EGKNL 236 (440)
Q Consensus 165 ~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~--------~~~~I 236 (440)
+-+|++||++ ....--..+.+.-.+-||.||.++... +..... ...-+.+.++++|+.+-++. +-.+|
T Consensus 18 PVv~f~~G~~-~~~s~Ys~ll~hvAShGyIVV~~d~~~--~~~~~~-~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l 93 (259)
T PF12740_consen 18 PVVLFLHGFL-LINSWYSQLLEHVASHGYIVVAPDLYS--IGGPDD-TDEVASAAEVIDWLAKGLESKLPLGVKPDFSKL 93 (259)
T ss_pred CEEEEeCCcC-CCHHHHHHHHHHHHhCceEEEEecccc--cCCCCc-chhHHHHHHHHHHHHhcchhhccccccccccce
Confidence 5788899999 554443444455566699999987321 111111 11122344556665442222 13489
Q ss_pred EEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCC
Q 040744 237 VFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVA 278 (440)
Q Consensus 237 l~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~ 278 (440)
.+-|.|=||-.++...+.. .+.....+++++|+=. |++
T Consensus 94 ~l~GHSrGGk~Af~~al~~---~~~~~~~~~~ali~lD-PVd 131 (259)
T PF12740_consen 94 ALAGHSRGGKVAFAMALGN---ASSSLDLRFSALILLD-PVD 131 (259)
T ss_pred EEeeeCCCCHHHHHHHhhh---cccccccceeEEEEec-ccc
Confidence 9999999999886544432 2223345788877654 444
No 135
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=85.05 E-value=2.2 Score=44.13 Aligned_cols=39 Identities=8% Similarity=0.168 Sum_probs=29.5
Q ss_pred cCCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCC
Q 040744 232 EGKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVAS 279 (440)
Q Consensus 232 ~~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~ 279 (440)
....|++.|+|.||+.+. ..+ ..+ ++|||+|+|-++.+.
T Consensus 309 ~~edIilygWSIGGF~~~---waA--s~Y----PdVkavvLDAtFDDl 347 (517)
T KOG1553|consen 309 RQEDIILYGWSIGGFPVA---WAA--SNY----PDVKAVVLDATFDDL 347 (517)
T ss_pred CccceEEEEeecCCchHH---HHh--hcC----CCceEEEeecchhhh
Confidence 377999999999999763 121 222 579999999998763
No 136
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=84.86 E-value=56 Score=34.51 Aligned_cols=39 Identities=13% Similarity=0.177 Sum_probs=30.8
Q ss_pred EEEE-EcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCcc
Q 040744 370 QLYI-YSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPH 410 (440)
Q Consensus 370 ~LYI-YS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~H 410 (440)
++|| .|+.|..+ .+..+++.+..+++|.+++...|+| +|
T Consensus 351 r~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~G-GH 390 (411)
T PRK10439 351 RIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVDG-GH 390 (411)
T ss_pred eEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECCC-Cc
Confidence 5776 56666544 5778999999999999999999987 46
No 137
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=84.73 E-value=2.1 Score=43.91 Aligned_cols=105 Identities=14% Similarity=0.128 Sum_probs=62.6
Q ss_pred CCCeEEEEeeecCCchhhHHHHHHHHHHCCCe---EEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhc-CCcEEE
Q 040744 163 KSRTVVVLLGWLGAKQKHLRKYAEWYTSKGFH---VITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDE-GKNLVF 238 (440)
Q Consensus 163 ~~~plVVLlGW~GA~~khl~KYa~iY~~~G~n---VL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~-~~~Il~ 238 (440)
...|+|++||.++.. .++.--...+...|+. +..+..+.... . .......+++...+.+.+... .+++.+
T Consensus 58 ~~~pivlVhG~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----~-~~~~~~~~ql~~~V~~~l~~~ga~~v~L 131 (336)
T COG1075 58 AKEPIVLVHGLGGGY-GNFLPLDYRLAILGWLTNGVYAFELSGGDG----T-YSLAVRGEQLFAYVDEVLAKTGAKKVNL 131 (336)
T ss_pred CCceEEEEccCcCCc-chhhhhhhhhcchHHHhcccccccccccCC----C-ccccccHHHHHHHHHHHHhhcCCCceEE
Confidence 456999999985543 4555555557777776 55544442210 1 111222345666665555444 689999
Q ss_pred EEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCC
Q 040744 239 HTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVAS 279 (440)
Q Consensus 239 H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~ 279 (440)
.|+||||.... .++..+.. ...|+.++-=++|-..
T Consensus 132 igHS~GG~~~r-y~~~~~~~-----~~~V~~~~tl~tp~~G 166 (336)
T COG1075 132 IGHSMGGLDSR-YYLGVLGG-----ANRVASVVTLGTPHHG 166 (336)
T ss_pred EeecccchhhH-HHHhhcCc-----cceEEEEEEeccCCCC
Confidence 99999999865 33332211 1467777777777653
No 138
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=84.58 E-value=7.5 Score=39.18 Aligned_cols=124 Identities=19% Similarity=0.118 Sum_probs=71.9
Q ss_pred eeeecCCCCccccCCCCCcC----CCCCCeEEEEeeecCCch--hhHHHHHHHHHHCCCeEEEEecCCCceee-----cc
Q 040744 141 YRWHLPETDAIDVSGTSDCL----AMKSRTVVVLLGWLGAKQ--KHLRKYAEWYTSKGFHVITFTFPMAEILS-----YQ 209 (440)
Q Consensus 141 y~~~~p~~~~~~~~~~~~~~----~~~~~plVVLlGW~GA~~--khl~KYa~iY~~~G~nVL~~~~p~~~il~-----~~ 209 (440)
|+.+|+.-.+. ...||..- .++.+-||.-|||+|.+. ..+.- |...||-|+..+.+-....+ +.
T Consensus 57 ydvTf~g~~g~-rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~----wa~~Gyavf~MdvRGQg~~~~dt~~~p 131 (321)
T COG3458 57 YDVTFTGYGGA-RIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLH----WAVAGYAVFVMDVRGQGSSSQDTADPP 131 (321)
T ss_pred EEEEEeccCCc-eEEEEEEeecccCCccceEEEEeeccCCCCCcccccc----ccccceeEEEEecccCCCccccCCCCC
Confidence 78889766655 35666532 245677888999999773 12332 45679999888776421111 00
Q ss_pred c----------c--h-h----hhHHHHHH---HHHHHHHhhhcCCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceE
Q 040744 210 V----------G--G-K----AEQNIELL---VNHLADCLEDEGKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRG 269 (440)
Q Consensus 210 ~----------g--~-k----~~k~l~~l---~~~i~~~l~~~~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG 269 (440)
. | + + ......++ ++.+..+-+-+..+|.+-|-|-||+++.... .+-++||+
T Consensus 132 ~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaa---------al~~rik~ 202 (321)
T COG3458 132 GGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAA---------ALDPRIKA 202 (321)
T ss_pred CCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhh---------hcChhhhc
Confidence 0 1 0 1 00111222 2333322233478999999999999873211 13368899
Q ss_pred EEecCCCCC
Q 040744 270 CIVDSAPVA 278 (440)
Q Consensus 270 ~I~DSaPg~ 278 (440)
.+.|=..-.
T Consensus 203 ~~~~~Pfl~ 211 (321)
T COG3458 203 VVADYPFLS 211 (321)
T ss_pred ccccccccc
Confidence 998875543
No 139
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=82.98 E-value=2.4 Score=40.43 Aligned_cols=49 Identities=14% Similarity=0.108 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhhhc----CCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCC
Q 040744 219 ELLVNHLADCLEDE----GKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSA 275 (440)
Q Consensus 219 ~~l~~~i~~~l~~~----~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSa 275 (440)
+-+.++|..+++.+ ..+..+.|+||||..++.. +++. ++...+++.=|+
T Consensus 96 ~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~---~l~~-----Pd~F~~~~~~S~ 148 (251)
T PF00756_consen 96 TFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYL---ALRH-----PDLFGAVIAFSG 148 (251)
T ss_dssp HHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHH---HHHS-----TTTESEEEEESE
T ss_pred eehhccchhHHHHhcccccceeEEeccCCCcHHHHHH---HHhC-----ccccccccccCc
Confidence 34444554555544 3339999999999987532 2331 234556666563
No 140
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=82.79 E-value=44 Score=33.42 Aligned_cols=218 Identities=15% Similarity=0.257 Sum_probs=95.0
Q ss_pred CCCCeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCceeecccchh-------hhHHHHHHHHHHHHHhhhc-C
Q 040744 162 MKSRTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGGK-------AEQNIELLVNHLADCLEDE-G 233 (440)
Q Consensus 162 ~~~~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k-------~~k~l~~l~~~i~~~l~~~-~ 233 (440)
.+.++||+.-|++ .+.+|.+--++.....||+|++|+.-.. ++.+.|.- .++.+..++ +|++.. .
T Consensus 28 ~~~~tiliA~Gf~-rrmdh~agLA~YL~~NGFhViRyDsl~H--vGlSsG~I~eftms~g~~sL~~V~----dwl~~~g~ 100 (294)
T PF02273_consen 28 KRNNTILIAPGFA-RRMDHFAGLAEYLSANGFHVIRYDSLNH--VGLSSGDINEFTMSIGKASLLTVI----DWLATRGI 100 (294)
T ss_dssp --S-EEEEE-TT--GGGGGGHHHHHHHHTTT--EEEE---B---------------HHHHHHHHHHHH----HHHHHTT-
T ss_pred ccCCeEEEecchh-HHHHHHHHHHHHHhhCCeEEEecccccc--ccCCCCChhhcchHHhHHHHHHHH----HHHHhcCC
Confidence 4456788888876 4668888888888899999999986431 12222221 123333333 555544 6
Q ss_pred CcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhhhhhhHHhhccccccccccccccccchh
Q 040744 234 KNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWASGFSAAFLKKNSVATKGIVYTNELETD 313 (440)
Q Consensus 234 ~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a~gfsaa~l~~~s~~~~~~~~~~~~~l~ 313 (440)
.++.+-.-|--|=.+|.... +. ++.-.|.==+-+... ....+.+..-++..+. .+ .+.-+
T Consensus 101 ~~~GLIAaSLSaRIAy~Va~------~i----~lsfLitaVGVVnlr--~TLe~al~~Dyl~~~i---~~-----lp~dl 160 (294)
T PF02273_consen 101 RRIGLIAASLSARIAYEVAA------DI----NLSFLITAVGVVNLR--DTLEKALGYDYLQLPI---EQ-----LPEDL 160 (294)
T ss_dssp --EEEEEETTHHHHHHHHTT------TS------SEEEEES--S-HH--HHHHHHHSS-GGGS-G---GG-------SEE
T ss_pred CcchhhhhhhhHHHHHHHhh------cc----CcceEEEEeeeeeHH--HHHHHHhccchhhcch---hh-----CCCcc
Confidence 67999999988887753321 11 233333333444431 1122222222222110 00 01111
Q ss_pred hhhccccCCCCCchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcccCCCCCCEEEEEcCCCCccCHHHHHHHHHHH
Q 040744 314 ELVGSRASGEPKPAVTETALLVVLEKFFEVILHLPAVNRRLSDVLGLLSSGQPACPQLYIYSSADRVIPAESVESFIEEQ 393 (440)
Q Consensus 314 ~~v~~~~~~~p~~~~~~~~ll~~l~~~f~~~~~~p~~~~rl~~~~~~l~~~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~ 393 (440)
-+.|... - .+. ++...+.. +.-++...+.++ +...+|.+-..+..|.-|.-.+|+++.+..
T Consensus 161 dfeGh~l------~-~~v----Fv~dc~e~--~w~~l~ST~~~~------k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~ 221 (294)
T PF02273_consen 161 DFEGHNL------G-AEV----FVTDCFEH--GWDDLDSTINDM------KRLSIPFIAFTANDDDWVKQSEVEELLDNI 221 (294)
T ss_dssp EETTEEE------E-HHH----HHHHHHHT--T-SSHHHHHHHH------TT--S-EEEEEETT-TTS-HHHHHHHHTT-
T ss_pred ccccccc------c-hHH----HHHHHHHc--CCccchhHHHHH------hhCCCCEEEEEeCCCccccHHHHHHHHHhc
Confidence 1112111 0 010 12222211 111122222222 334689999999999999999999999765
Q ss_pred HHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHHHH
Q 040744 394 RKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDYV 433 (440)
Q Consensus 394 r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~~ 433 (440)
... .++.+...||.|= +..+| ..+++|.+..-
T Consensus 222 ~s~--~~klysl~Gs~Hd--L~enl----~vlrnfy~svt 253 (294)
T PF02273_consen 222 NSN--KCKLYSLPGSSHD--LGENL----VVLRNFYQSVT 253 (294)
T ss_dssp TT----EEEEEETT-SS---TTSSH----HHHHHHHHHHH
T ss_pred CCC--ceeEEEecCccch--hhhCh----HHHHHHHHHHH
Confidence 432 4678899999994 44444 34555555443
No 141
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=81.81 E-value=2.4 Score=44.85 Aligned_cols=52 Identities=25% Similarity=0.299 Sum_probs=42.4
Q ss_pred CCCCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChH
Q 040744 364 GQPACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPK 419 (440)
Q Consensus 364 ~~~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~Pe 419 (440)
....||.+.++++.|.++||+.|-.... -.|.+|+.+.. +|+|++-+-.+|.
T Consensus 327 ~~It~pvy~~a~~~DhI~P~~Sv~~g~~---l~~g~~~f~l~-~sGHIa~vVN~p~ 378 (445)
T COG3243 327 GDITCPVYNLAAEEDHIAPWSSVYLGAR---LLGGEVTFVLS-RSGHIAGVVNPPG 378 (445)
T ss_pred hhcccceEEEeecccccCCHHHHHHHHH---hcCCceEEEEe-cCceEEEEeCCcc
Confidence 5678999999999999999998877664 34446766655 7999999999874
No 142
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=81.81 E-value=5 Score=42.52 Aligned_cols=126 Identities=20% Similarity=0.270 Sum_probs=64.1
Q ss_pred CCCCce-eeecCCCCccccCCCCCcCCCCCCeEEEEee--ec-CCchhhHHHH--HHHHHHCCCeEEEEecCCCc--eee
Q 040744 136 YSDVLY-RWHLPETDAIDVSGTSDCLAMKSRTVVVLLG--WL-GAKQKHLRKY--AEWYTSKGFHVITFTFPMAE--ILS 207 (440)
Q Consensus 136 ~~~~~y-~~~~p~~~~~~~~~~~~~~~~~~~plVVLlG--W~-GA~~khl~KY--a~iY~~~G~nVL~~~~p~~~--il~ 207 (440)
++|=+| +|--|.....+ .+-|-+|.+|| +. |+. ....| ..+..+.+.-||++.+|..- ++.
T Consensus 105 sEDCL~LnI~~P~~~~~~---------~~lPV~v~ihGG~f~~G~~--~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~ 173 (535)
T PF00135_consen 105 SEDCLYLNIYTPSNASSN---------SKLPVMVWIHGGGFMFGSG--SFPPYDGASLAASKDVIVVTINYRLGAFGFLS 173 (535)
T ss_dssp ES---EEEEEEETSSSST---------TSEEEEEEE--STTTSSCT--TSGGGHTHHHHHHHTSEEEEE----HHHHH-B
T ss_pred CchHHHHhhhhccccccc---------cccceEEEeecccccCCCc--ccccccccccccCCCEEEEEeccccccccccc
Confidence 678888 88887765442 12234566888 22 222 11111 33445678889998888642 121
Q ss_pred cc----c-chhhhHHHHHHHHHHHHHhhh---cCCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCC
Q 040744 208 YQ----V-GGKAEQNIELLVNHLADCLED---EGKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVA 278 (440)
Q Consensus 208 ~~----~-g~k~~k~l~~l~~~i~~~l~~---~~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~ 278 (440)
.. . |...-.+....++|+.+.+.. ++++|.+.|.|-||..+..+++. ... ..-.+..|+-|+...
T Consensus 174 ~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s---p~~---~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 174 LGDLDAPSGNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLS---PSS---KGLFHRAILQSGSAL 246 (535)
T ss_dssp SSSTTSHBSTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHG---GGG---TTSBSEEEEES--TT
T ss_pred ccccccCchhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeec---ccc---ccccccccccccccc
Confidence 10 0 222233445666777655433 37899999999999987544433 111 134678999998543
No 143
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=81.64 E-value=6.6 Score=39.85 Aligned_cols=101 Identities=22% Similarity=0.189 Sum_probs=55.8
Q ss_pred CCceeeecCCCCccccCCCCCcCCCCCCeEEEEeeecCC--chhhHHHHHHHHHHCCCeEEEEe-cC--C-Ccee--ecc
Q 040744 138 DVLYRWHLPETDAIDVSGTSDCLAMKSRTVVVLLGWLGA--KQKHLRKYAEWYTSKGFHVITFT-FP--M-AEIL--SYQ 209 (440)
Q Consensus 138 ~~~y~~~~p~~~~~~~~~~~~~~~~~~~plVVLlGW~GA--~~khl~KYa~iY~~~G~nVL~~~-~p--~-~~il--~~~ 209 (440)
...|....|..... +.+-||+|||=.|+ ...|..-+-++-...||-|+-.+ ++ + .... ++.
T Consensus 46 ~r~y~l~vP~g~~~-----------~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~ 114 (312)
T COG3509 46 KRSYRLYVPPGLPS-----------GAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFG 114 (312)
T ss_pred ccceEEEcCCCCCC-----------CCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCC
Confidence 34577777655422 22568889997773 33455555777788898887652 11 1 1111 111
Q ss_pred cc----hh-hhHHHHHHHHHHHHHhhhcCCcEEEEEecccHHHHH
Q 040744 210 VG----GK-AEQNIELLVNHLADCLEDEGKNLVFHTFSNTGWLTY 249 (440)
Q Consensus 210 ~g----~k-~~k~l~~l~~~i~~~l~~~~~~Il~H~FSnGG~~~~ 249 (440)
.- +. .--.+..|++.|..-...++.+|++-|.||||.|+.
T Consensus 115 p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~ 159 (312)
T COG3509 115 PADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMAN 159 (312)
T ss_pred cccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHH
Confidence 10 00 111233444444322223378999999999999874
No 144
>PRK04940 hypothetical protein; Provisional
Probab=81.61 E-value=48 Score=31.26 Aligned_cols=53 Identities=13% Similarity=0.028 Sum_probs=41.2
Q ss_pred EEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHH
Q 040744 370 QLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLED 431 (440)
Q Consensus 370 ~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~ 431 (440)
.+.+-.+.|++.+|++..+.++.+- +...++|..| --.+-++|...|.+|+++
T Consensus 127 ~~vllq~gDEvLDyr~a~~~y~~~y------~~~v~~GGdH---~f~~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 127 CLVILSRNDEVLDSQRTAEELHPYY------EIVWDEEQTH---KFKNISPHLQRIKAFKTL 179 (180)
T ss_pred EEEEEeCCCcccCHHHHHHHhccCc------eEEEECCCCC---CCCCHHHHHHHHHHHHhc
Confidence 3789999999999999998886431 1455677765 456788899999999853
No 145
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=81.52 E-value=7.8 Score=38.97 Aligned_cols=105 Identities=13% Similarity=0.173 Sum_probs=45.9
Q ss_pred CCCCeEEEEeeecCC--chhhHHHHHHHHHHCCCeEEEEecCCCceee-----cccchhhhHHHHHHHHHHHHHhhhc--
Q 040744 162 MKSRTVVVLLGWLGA--KQKHLRKYAEWYTSKGFHVITFTFPMAEILS-----YQVGGKAEQNIELLVNHLADCLEDE-- 232 (440)
Q Consensus 162 ~~~~plVVLlGW~GA--~~khl~KYa~iY~~~G~nVL~~~~p~~~il~-----~~~g~k~~k~l~~l~~~i~~~l~~~-- 232 (440)
.+.+||||.||-+++ .+.-|....++-++.-..+.++.....+-.. ..++ ...+.++ .+.+.++++
T Consensus 3 ~~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig~~~~~D~~~s~f~-~v~~Qv~----~vc~~l~~~p~ 77 (279)
T PF02089_consen 3 PSPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIGNDPSEDVENSFFG-NVNDQVE----QVCEQLANDPE 77 (279)
T ss_dssp TSS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SSSSHHHHHHHHHHS-HHHHHHH----HHHHHHHH-GG
T ss_pred CCCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEECCCcchhhhhhHHH-HHHHHHH----HHHHHHhhChh
Confidence 355899999998873 3344666666666665555444333221000 0011 1122222 233333333
Q ss_pred -CCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCC
Q 040744 233 -GKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVA 278 (440)
Q Consensus 233 -~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~ 278 (440)
...+-+-|||=||-++ +.+++.+. . .+|+-+|-=++|-.
T Consensus 78 L~~G~~~IGfSQGgl~l-Ra~vq~c~----~--~~V~nlISlggph~ 117 (279)
T PF02089_consen 78 LANGFNAIGFSQGGLFL-RAYVQRCN----D--PPVHNLISLGGPHM 117 (279)
T ss_dssp GTT-EEEEEETCHHHHH-HHHHHH-T----S--S-EEEEEEES--TT
T ss_pred hhcceeeeeeccccHHH-HHHHHHCC----C--CCceeEEEecCccc
Confidence 5789999999999864 33434332 1 36777776665543
No 146
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=79.42 E-value=34 Score=33.75 Aligned_cols=43 Identities=19% Similarity=0.315 Sum_probs=32.0
Q ss_pred CCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCcc
Q 040744 367 ACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPH 410 (440)
Q Consensus 367 ~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~H 410 (440)
.....++||+.|.=||-+.-|++.+.......+++.+. +|-+|
T Consensus 221 ~~kl~f~fg~~D~Wvp~~~~~~l~~~~~~~~~~~~v~~-~~i~H 263 (266)
T PF10230_consen 221 GDKLWFYFGQNDHWVPNETRDELIERYPGHEPDVVVDE-EGIPH 263 (266)
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHcCCCCCeEEEec-CCCCC
Confidence 45667899999999999999999987653333455554 66666
No 147
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=76.64 E-value=21 Score=33.83 Aligned_cols=105 Identities=13% Similarity=0.159 Sum_probs=53.6
Q ss_pred CCeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEec--CCCceeecccchhhhHHHHHHHHHHHHHhhhc-CCcEEEEE
Q 040744 164 SRTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTF--PMAEILSYQVGGKAEQNIELLVNHLADCLEDE-GKNLVFHT 240 (440)
Q Consensus 164 ~~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~--p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~-~~~Il~H~ 240 (440)
.+.+| ..+.|... -.++..++.+....+.. .....+..++..........+...+.+.+++. ..+|++=|
T Consensus 62 ~~~iv--va~RGT~~-----~~d~~~d~~~~~~~~~~~~~~~~~vh~Gf~~~~~~~~~~~~~~~~~~~~~~p~~~i~vtG 134 (229)
T cd00519 62 RKTIV--IAFRGTVS-----LADWLTDLDFSPVPLDPPLCSGGKVHSGFYSAYKSLYNQVLPELKSALKQYPDYKIIVTG 134 (229)
T ss_pred CCeEE--EEEeCCCc-----hHHHHHhcccccccCCCCCCCCcEEcHHHHHHHHHHHHHHHHHHHHHHhhCCCceEEEEc
Confidence 34444 44568764 46777777554443321 11111111111112222233444444444443 67999999
Q ss_pred ecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCC
Q 040744 241 FSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVA 278 (440)
Q Consensus 241 FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~ 278 (440)
.|+||+++.-.-++ +.++. ...+++.+.|-+.+..
T Consensus 135 HSLGGaiA~l~a~~-l~~~~--~~~~i~~~tFg~P~vg 169 (229)
T cd00519 135 HSLGGALASLLALD-LRLRG--PGSDVTVYTFGQPRVG 169 (229)
T ss_pred cCHHHHHHHHHHHH-HHhhC--CCCceEEEEeCCCCCC
Confidence 99999976322222 22221 2356889999886554
No 148
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=75.67 E-value=18 Score=43.06 Aligned_cols=100 Identities=12% Similarity=0.140 Sum_probs=55.1
Q ss_pred CCeEEEEeeecCCchhhHHHHHHHHHH--CCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhh-c-CCcEEEE
Q 040744 164 SRTVVVLLGWLGAKQKHLRKYAEWYTS--KGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLED-E-GKNLVFH 239 (440)
Q Consensus 164 ~~plVVLlGW~GA~~khl~KYa~iY~~--~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~-~-~~~Il~H 239 (440)
.++++++|||+|... -|..+-.. .++.|+.++.|..+.. .... ..++.+++.+.+.+.. . .++..+-
T Consensus 1068 ~~~l~~lh~~~g~~~----~~~~l~~~l~~~~~v~~~~~~g~~~~-~~~~----~~l~~la~~~~~~i~~~~~~~p~~l~ 1138 (1296)
T PRK10252 1068 GPTLFCFHPASGFAW----QFSVLSRYLDPQWSIYGIQSPRPDGP-MQTA----TSLDEVCEAHLATLLEQQPHGPYHLL 1138 (1296)
T ss_pred CCCeEEecCCCCchH----HHHHHHHhcCCCCcEEEEECCCCCCC-CCCC----CCHHHHHHHHHHHHHhhCCCCCEEEE
Confidence 368999999999642 34444333 3678888776642211 0011 1233444443333332 2 4689999
Q ss_pred EecccHHHHHHHHHHHHhhcCCCCccCceE-EEecCCCC
Q 040744 240 TFSNTGWLTYGAILEKFQNKDPSLMGRIRG-CIVDSAPV 277 (440)
Q Consensus 240 ~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG-~I~DSaPg 277 (440)
|+||||..++. ++..+.+.. .++.. +++|+.+.
T Consensus 1139 G~S~Gg~vA~e-~A~~l~~~~----~~v~~l~l~~~~~~ 1172 (1296)
T PRK10252 1139 GYSLGGTLAQG-IAARLRARG----EEVAFLGLLDTWPP 1172 (1296)
T ss_pred EechhhHHHHH-HHHHHHHcC----CceeEEEEecCCCc
Confidence 99999997654 334443322 34444 45576443
No 149
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=75.62 E-value=5.3 Score=32.19 Aligned_cols=35 Identities=26% Similarity=0.554 Sum_probs=27.2
Q ss_pred CCeEEEEeeecCCchhhHHHH---HHHHHHCCCeEEEEecCC
Q 040744 164 SRTVVVLLGWLGAKQKHLRKY---AEWYTSKGFHVITFTFPM 202 (440)
Q Consensus 164 ~~plVVLlGW~GA~~khl~KY---a~iY~~~G~nVL~~~~p~ 202 (440)
...|+|+||.+ .|..+| ++...+.||.|..++.+-
T Consensus 16 k~~v~i~HG~~----eh~~ry~~~a~~L~~~G~~V~~~D~rG 53 (79)
T PF12146_consen 16 KAVVVIVHGFG----EHSGRYAHLAEFLAEQGYAVFAYDHRG 53 (79)
T ss_pred CEEEEEeCCcH----HHHHHHHHHHHHHHhCCCEEEEECCCc
Confidence 35789999985 455566 666788899999999874
No 150
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=74.30 E-value=15 Score=31.49 Aligned_cols=59 Identities=17% Similarity=0.219 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhhhc-CCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCC
Q 040744 219 ELLVNHLADCLEDE-GKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVA 278 (440)
Q Consensus 219 ~~l~~~i~~~l~~~-~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~ 278 (440)
+.+.+.+.++.++. +..|++=|+|.||+++.-. ...+.++......+++.+-|-+.+..
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~-a~~l~~~~~~~~~~~~~~~fg~P~~~ 107 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHSLGGALASLA-AADLASHGPSSSSNVKCYTFGAPRVG 107 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHH-HHHHHHCTTTSTTTEEEEEES-S--B
T ss_pred HHHHHHHHHHHhcccCccchhhccchHHHHHHHH-HHhhhhcccccccceeeeecCCcccc
Confidence 45555565544444 5799999999999975322 22233333333467888888775553
No 151
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=70.79 E-value=29 Score=34.94 Aligned_cols=81 Identities=17% Similarity=0.252 Sum_probs=47.0
Q ss_pred CCCeEEEEeeecCCchhhHHHHHHHHH---HCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhh--------
Q 040744 163 KSRTVVVLLGWLGAKQKHLRKYAEWYT---SKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLED-------- 231 (440)
Q Consensus 163 ~~~plVVLlGW~GA~~khl~KYa~iY~---~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~-------- 231 (440)
+=+-|+++|||+-- -.-|.++.+ +-||-|+..+.- +++. ..|...-+....+++|+..-++.
T Consensus 45 ~yPVilF~HG~~l~----ns~Ys~lL~HIASHGfIVVAPQl~--~~~~-p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~ 117 (307)
T PF07224_consen 45 TYPVILFLHGFNLY----NSFYSQLLAHIASHGFIVVAPQLY--TLFP-PDGQDEIKSAASVINWLPEGLQHVLPENVEA 117 (307)
T ss_pred CccEEEEeechhhh----hHHHHHHHHHHhhcCeEEEechhh--cccC-CCchHHHHHHHHHHHHHHhhhhhhCCCCccc
Confidence 33567789999952 345555554 458888775432 2222 22222213344455555443221
Q ss_pred cCCcEEEEEecccHHHHHH
Q 040744 232 EGKNLVFHTFSNTGWLTYG 250 (440)
Q Consensus 232 ~~~~Il~H~FSnGG~~~~~ 250 (440)
+-..+.+-|.|.||-+++.
T Consensus 118 nl~klal~GHSrGGktAFA 136 (307)
T PF07224_consen 118 NLSKLALSGHSRGGKTAFA 136 (307)
T ss_pred ccceEEEeecCCccHHHHH
Confidence 2468999999999998864
No 152
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=68.48 E-value=31 Score=36.02 Aligned_cols=38 Identities=16% Similarity=0.162 Sum_probs=20.9
Q ss_pred CCeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCC
Q 040744 164 SRTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPM 202 (440)
Q Consensus 164 ~~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~ 202 (440)
=|-||+-||.+|.|.- -.-+..-....||-|+.+.-+-
T Consensus 100 ~PvvIFSHGlgg~R~~-yS~~~~eLAS~GyVV~aieHrD 137 (379)
T PF03403_consen 100 FPVVIFSHGLGGSRTS-YSAICGELASHGYVVAAIEHRD 137 (379)
T ss_dssp EEEEEEE--TT--TTT-THHHHHHHHHTT-EEEEE---S
T ss_pred CCEEEEeCCCCcchhh-HHHHHHHHHhCCeEEEEeccCC
Confidence 3567889999999854 3444555667899999986653
No 153
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=68.13 E-value=18 Score=40.11 Aligned_cols=46 Identities=26% Similarity=0.383 Sum_probs=38.3
Q ss_pred CCcEEEEEecccHHHHHHHHHHHHhhcCCC---CccCceEEEecCCCCC
Q 040744 233 GKNLVFHTFSNTGWLTYGAILEKFQNKDPS---LMGRIRGCIVDSAPVA 278 (440)
Q Consensus 233 ~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~---l~~~VkG~I~DSaPg~ 278 (440)
.+||++-+.||||-++=.-|++++.+..+. +..+.+|+||=|.|-.
T Consensus 525 ~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHr 573 (697)
T KOG2029|consen 525 DRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHR 573 (697)
T ss_pred CCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCC
Confidence 789999999999998777778888655543 4578999999999965
No 154
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=67.51 E-value=19 Score=36.05 Aligned_cols=63 Identities=21% Similarity=0.304 Sum_probs=41.6
Q ss_pred CCCCEEEEEcC------CCCccCHHHHHHHHHHHHHcCCceEEEEeCC--CccccccccChHHHHHHHHHHHH
Q 040744 366 PACPQLYIYSS------ADRVIPAESVESFIEEQRKAGREVRACNFVS--TPHVDHFRNDPKLYTTQLSQFLE 430 (440)
Q Consensus 366 ~~~P~LYIYS~------aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~--S~HV~H~R~~PeeY~~aV~~FL~ 430 (440)
+..-.|.|+|+ .|-.|||.+.-........+|..++..+++| +.|-. +-.+|. =.+.|.+||-
T Consensus 215 ~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs~-lhen~~-v~~yv~~FLw 285 (288)
T COG4814 215 PNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARHSK-LHENPT-VAKYVKNFLW 285 (288)
T ss_pred CCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchhhc-cCCChh-HHHHHHHHhh
Confidence 44567888886 5678999999888887777887777777743 44432 222332 3455666653
No 155
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=62.91 E-value=38 Score=34.76 Aligned_cols=64 Identities=14% Similarity=0.122 Sum_probs=42.3
Q ss_pred hHHHHHHHHHHHHHhhhc----CCcEEEEEecccHHHHHHHHHHHHhhcCCC---CccCceEEEecCCCCCC
Q 040744 215 EQNIELLVNHLADCLEDE----GKNLVFHTFSNTGWLTYGAILEKFQNKDPS---LMGRIRGCIVDSAPVAS 279 (440)
Q Consensus 215 ~k~l~~l~~~i~~~l~~~----~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~---l~~~VkG~I~DSaPg~~ 279 (440)
++..+++.+.|..++... ..++.+-|-|-||-..- .+...+.+.... ...++||+++=++-.++
T Consensus 113 ~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP-~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 113 DQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVP-ALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHH-HHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred hHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccch-hhHHhhhhccccccccccccccceecCccccc
Confidence 445567777777776553 56999999999999643 344444333222 24689999999877653
No 156
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=61.25 E-value=30 Score=37.08 Aligned_cols=92 Identities=15% Similarity=0.179 Sum_probs=48.5
Q ss_pred hhHHHHHHHHHHCCCeEE--EEecCCCceeecccchhhhHHHHHHHHHHHHHhhhc-CCcEEEEEecccHHHHHHHHHHH
Q 040744 179 KHLRKYAEWYTSKGFHVI--TFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDE-GKNLVFHTFSNTGWLTYGAILEK 255 (440)
Q Consensus 179 khl~KYa~iY~~~G~nVL--~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~-~~~Il~H~FSnGG~~~~~~Ll~~ 255 (440)
....+-++...+.||.+- ++-+|.. .+........++.+.+.|.+..+.. ..++.+-|.||||.++...+..
T Consensus 108 ~~~~~li~~L~~~GY~~~~dL~g~gYD----wR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~- 182 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKEGKTLFGFGYD----FRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSL- 182 (440)
T ss_pred HHHHHHHHHHHHcCCccCCCcccCCCC----ccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHH-
Confidence 456666777888888541 1112211 0101111222344444444444444 6799999999999987544422
Q ss_pred HhhcCCCCccCceEEEecCCCCC
Q 040744 256 FQNKDPSLMGRIRGCIVDSAPVA 278 (440)
Q Consensus 256 l~~~~~~l~~~VkG~I~DSaPg~ 278 (440)
.. ......|+.+|.=++|-.
T Consensus 183 ~p---~~~~k~I~~~I~la~P~~ 202 (440)
T PLN02733 183 HS---DVFEKYVNSWIAIAAPFQ 202 (440)
T ss_pred CC---HhHHhHhccEEEECCCCC
Confidence 11 111235677776666644
No 157
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=60.76 E-value=34 Score=30.17 Aligned_cols=43 Identities=16% Similarity=0.022 Sum_probs=27.8
Q ss_pred CCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCC
Q 040744 233 GKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVA 278 (440)
Q Consensus 233 ~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~ 278 (440)
...|++=|+|+||+++.-. ...+.+.. ....++.+.||+++..
T Consensus 27 ~~~i~v~GHSlGg~lA~l~-a~~~~~~~--~~~~~~~~~fg~p~~~ 69 (153)
T cd00741 27 DYKIHVTGHSLGGALAGLA-GLDLRGRG--LGRLVRVYTFGPPRVG 69 (153)
T ss_pred CCeEEEEEcCHHHHHHHHH-HHHHHhcc--CCCceEEEEeCCCccc
Confidence 6799999999999976421 22232221 1245778889986654
No 158
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=58.23 E-value=59 Score=30.99 Aligned_cols=85 Identities=18% Similarity=0.168 Sum_probs=50.2
Q ss_pred HHHHHHHCCCeEEEEecCCCceeecccchhh-hHHHHHHHHHHHHHhhh-cCCcEEEEEecccHHHHHHHHHHHHhhcCC
Q 040744 184 YAEWYTSKGFHVITFTFPMAEILSYQVGGKA-EQNIELLVNHLADCLED-EGKNLVFHTFSNTGWLTYGAILEKFQNKDP 261 (440)
Q Consensus 184 Ya~iY~~~G~nVL~~~~p~~~il~~~~g~k~-~k~l~~l~~~i~~~l~~-~~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~ 261 (440)
-++...+.|+.|+-++..- +| +..|. ++...++...|..|.+. +.+++++-|+|-|+-..- .+...| .+
T Consensus 21 ~a~~l~~~G~~VvGvdsl~--Yf---w~~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP-~~~nrL---p~ 91 (192)
T PF06057_consen 21 IAEALAKQGVPVVGVDSLR--YF---WSERTPEQTAADLARIIRHYRARWGRKRVVLIGYSFGADVLP-FIYNRL---PA 91 (192)
T ss_pred HHHHHHHCCCeEEEechHH--HH---hhhCCHHHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhHH-HHHhhC---CH
Confidence 3566779999999987642 22 22221 22234444444444433 278999999999997532 222222 12
Q ss_pred CCccCceEEEecCCCCC
Q 040744 262 SLMGRIRGCIVDSAPVA 278 (440)
Q Consensus 262 ~l~~~VkG~I~DSaPg~ 278 (440)
.+..+|+++++=+ |+.
T Consensus 92 ~~r~~v~~v~Ll~-p~~ 107 (192)
T PF06057_consen 92 ALRARVAQVVLLS-PST 107 (192)
T ss_pred HHHhheeEEEEec-cCC
Confidence 2346888888877 554
No 159
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=56.38 E-value=46 Score=34.78 Aligned_cols=93 Identities=18% Similarity=0.172 Sum_probs=50.3
Q ss_pred hHHHHHHHHHHCCCeE--EEEecCCC-ceeecccchhhhHHHHHHHHHHHHHhhhcCCcEEEEEecccHHHHHHHHHHHH
Q 040744 180 HLRKYAEWYTSKGFHV--ITFTFPMA-EILSYQVGGKAEQNIELLVNHLADCLEDEGKNLVFHTFSNTGWLTYGAILEKF 256 (440)
Q Consensus 180 hl~KYa~iY~~~G~nV--L~~~~p~~-~il~~~~g~k~~k~l~~l~~~i~~~l~~~~~~Il~H~FSnGG~~~~~~Ll~~l 256 (440)
...+.++...+.||.. -++.+|.. + ++.. ........|.+.|.+..+.+++++++-++||||-++...|...-
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR-~~~~---~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~ 141 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWR-LSPA---ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMP 141 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechh-hchh---hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhcc
Confidence 5667777788889842 23333321 0 0111 01111223333333333444789999999999998754442211
Q ss_pred hhcCCCCccCceEEEecCCCCC
Q 040744 257 QNKDPSLMGRIRGCIVDSAPVA 278 (440)
Q Consensus 257 ~~~~~~l~~~VkG~I~DSaPg~ 278 (440)
++ . =....|+++|.=++|-.
T Consensus 142 ~~-~-W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 142 QE-E-WKDKYIKRFISIGTPFG 161 (389)
T ss_pred ch-h-hHHhhhhEEEEeCCCCC
Confidence 11 0 02357899999888865
No 160
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=55.75 E-value=24 Score=34.14 Aligned_cols=55 Identities=18% Similarity=0.111 Sum_probs=32.8
Q ss_pred HHHHHHHHHhhhcCCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEE-ecCCCCCC
Q 040744 220 LLVNHLADCLEDEGKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCI-VDSAPVAS 279 (440)
Q Consensus 220 ~l~~~i~~~l~~~~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I-~DSaPg~~ 279 (440)
..++++.+..+..++.|++=|+|-||.++....+. +. ....++|..++ ||+ ||-.
T Consensus 70 ~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~-~~---~~~~~rI~~vy~fDg-PGf~ 125 (224)
T PF11187_consen 70 SALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAAN-CD---DEIQDRISKVYSFDG-PGFS 125 (224)
T ss_pred HHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHH-cc---HHHhhheeEEEEeeC-CCCC
Confidence 34445544444446679999999999976433222 11 12235675555 898 7753
No 161
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=55.20 E-value=39 Score=35.35 Aligned_cols=85 Identities=20% Similarity=0.127 Sum_probs=54.4
Q ss_pred CeEEEEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCceee---cccc---------hhhhHHHHHHHHHHHHH----
Q 040744 165 RTVVVLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILS---YQVG---------GKAEQNIELLVNHLADC---- 228 (440)
Q Consensus 165 ~plVVLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~---~~~g---------~k~~k~l~~l~~~i~~~---- 228 (440)
+-||+-||-++. .....--++...+.||-|...+.|-+..-. ...| .-.-+++..+++++...
T Consensus 72 PlvvlshG~Gs~-~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP 150 (365)
T COG4188 72 PLVVLSHGSGSY-VTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASP 150 (365)
T ss_pred CeEEecCCCCCC-ccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCc
Confidence 446667997765 356777788899999999887766432211 0111 01223456666666554
Q ss_pred -hhhc--CCcEEEEEecccHHHHHH
Q 040744 229 -LEDE--GKNLVFHTFSNTGWLTYG 250 (440)
Q Consensus 229 -l~~~--~~~Il~H~FSnGG~~~~~ 250 (440)
+..+ ..+|.+-|||-||++++.
T Consensus 151 ~l~~~ld~~~Vgv~GhS~GG~T~m~ 175 (365)
T COG4188 151 ALAGRLDPQRVGVLGHSFGGYTAME 175 (365)
T ss_pred ccccccCccceEEEecccccHHHHH
Confidence 2222 569999999999999753
No 162
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=53.84 E-value=1e+02 Score=30.56 Aligned_cols=100 Identities=13% Similarity=0.134 Sum_probs=53.3
Q ss_pred CeEEEEeeecCCchhhHHHHHHHHHHCCCe--EEEEecCCCceeecccchhhhHHHHHHHH-HHHHHhhhc-CCcEEEEE
Q 040744 165 RTVVVLLGWLGAKQKHLRKYAEWYTSKGFH--VITFTFPMAEILSYQVGGKAEQNIELLVN-HLADCLEDE-GKNLVFHT 240 (440)
Q Consensus 165 ~plVVLlGW~GA~~khl~KYa~iY~~~G~n--VL~~~~p~~~il~~~~g~k~~k~l~~l~~-~i~~~l~~~-~~~Il~H~ 240 (440)
+||.++|+=.| +..-|+.+=..++-. ++-..+|.. ..+......++++++ ++.++.+.. .+|+.+=|
T Consensus 1 ~pLF~fhp~~G----~~~~~~~L~~~l~~~~~v~~l~a~g~-----~~~~~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G 71 (257)
T COG3319 1 PPLFCFHPAGG----SVLAYAPLAAALGPLLPVYGLQAPGY-----GAGEQPFASLDDMAAAYVAAIRRVQPEGPYVLLG 71 (257)
T ss_pred CCEEEEcCCCC----cHHHHHHHHHHhccCceeeccccCcc-----cccccccCCHHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 47888888776 344554333333322 222233321 111111222333333 333333333 78999999
Q ss_pred ecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCC
Q 040744 241 FSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPV 277 (440)
Q Consensus 241 FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg 277 (440)
+|.||..+|. +...|...+... ..-.++|+.|.
T Consensus 72 ~S~GG~vA~e-vA~qL~~~G~~V---a~L~llD~~~~ 104 (257)
T COG3319 72 WSLGGAVAFE-VAAQLEAQGEEV---AFLGLLDAVPP 104 (257)
T ss_pred eccccHHHHH-HHHHHHhCCCeE---EEEEEeccCCC
Confidence 9999998764 555566554322 13478899887
No 163
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=51.56 E-value=68 Score=34.46 Aligned_cols=63 Identities=14% Similarity=0.102 Sum_probs=39.5
Q ss_pred hHHHHHHHHHHHHHhhhc----CCcEEEEEecccHHHHHHHHHHHHhhcC---CCCccCceEEEecCCCCC
Q 040744 215 EQNIELLVNHLADCLEDE----GKNLVFHTFSNTGWLTYGAILEKFQNKD---PSLMGRIRGCIVDSAPVA 278 (440)
Q Consensus 215 ~k~l~~l~~~i~~~l~~~----~~~Il~H~FSnGG~~~~~~Ll~~l~~~~---~~l~~~VkG~I~DSaPg~ 278 (440)
+...+++.+.|..+++.. ..++.+-|.|+||..+-. ++..+.++. ....-++||+++=.+-.+
T Consensus 148 ~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~-~a~~i~~~n~~~~~~~inLkGi~IGNg~~d 217 (462)
T PTZ00472 148 SEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPA-TAYRINMGNKKGDGLYINLAGLAVGNGLTD 217 (462)
T ss_pred HHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHH-HHHHHHhhccccCCceeeeEEEEEeccccC
Confidence 344566666666665433 589999999999997543 333332211 123457899988776554
No 164
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=48.81 E-value=31 Score=36.49 Aligned_cols=36 Identities=22% Similarity=0.199 Sum_probs=33.0
Q ss_pred EEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEe
Q 040744 370 QLYIYSSADRVIPAESVESFIEEQRKAGREVRACNF 405 (440)
Q Consensus 370 ~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F 405 (440)
-...||..|+++|.++=+++++..++.|.+++....
T Consensus 296 yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lI 331 (403)
T PF11144_consen 296 YVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLI 331 (403)
T ss_pred EEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEe
Confidence 355899999999999999999999999999998877
No 165
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=46.98 E-value=2.8e+02 Score=29.18 Aligned_cols=111 Identities=18% Similarity=0.237 Sum_probs=64.1
Q ss_pred CCCeEEEEee---ecCCchhhHHHHHHHHHHCCC-eEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhh-cCCcEE
Q 040744 163 KSRTVVVLLG---WLGAKQKHLRKYAEWYTSKGF-HVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLED-EGKNLV 237 (440)
Q Consensus 163 ~~~plVVLlG---W~GA~~khl~KYa~iY~~~G~-nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~-~~~~Il 237 (440)
+.+-||.+|| -++..+-++.-...+|+.+.= .+++.++.... +-.-|.+....+.++++.....++. ....|+
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~~SILvLDYsLt~--~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~ 198 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPEVSILVLDYSLTS--SDEHGHKYPTQLRQLVATYDYLVESEGNKNII 198 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCCCeEEEEeccccc--cccCCCcCchHHHHHHHHHHHHHhccCCCeEE
Confidence 3466777998 233667777777888887751 23444443211 0001223333344455444444533 378999
Q ss_pred EEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCC
Q 040744 238 FHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVA 278 (440)
Q Consensus 238 ~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~ 278 (440)
+-|=|-||-++.+.|+. +++... + .--+.+|+-|.=+.
T Consensus 199 LmGDSAGGnL~Ls~Lqy-L~~~~~-~-~~Pk~~iLISPWv~ 236 (374)
T PF10340_consen 199 LMGDSAGGNLALSFLQY-LKKPNK-L-PYPKSAILISPWVN 236 (374)
T ss_pred EEecCccHHHHHHHHHH-HhhcCC-C-CCCceeEEECCCcC
Confidence 99999999998775544 443222 2 12378999994443
No 166
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=46.19 E-value=91 Score=32.39 Aligned_cols=50 Identities=24% Similarity=0.446 Sum_probs=35.8
Q ss_pred CCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhhhh
Q 040744 233 GKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQVWA 286 (440)
Q Consensus 233 ~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~~a 286 (440)
.+||.+-|||+|+-..|..|.++-.. +. ..-|.-+|+=.+|... ++..|.
T Consensus 219 ~RpVtLvG~SLGarvI~~cL~~L~~~-~~--~~lVe~VvL~Gapv~~-~~~~W~ 268 (345)
T PF05277_consen 219 ERPVTLVGHSLGARVIYYCLLELAER-KA--FGLVENVVLMGAPVPS-DPEEWR 268 (345)
T ss_pred CCceEEEeecccHHHHHHHHHHHHhc-cc--cCeEeeEEEecCCCCC-CHHHHH
Confidence 77999999999999988888775443 21 1346677777888865 345553
No 167
>PLN02606 palmitoyl-protein thioesterase
Probab=44.87 E-value=1.5e+02 Score=30.34 Aligned_cols=106 Identities=8% Similarity=0.116 Sum_probs=54.5
Q ss_pred CCCeEEEEeeecC-CchhhHHHHHHHHHHC-CCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhcCCcEEEEE
Q 040744 163 KSRTVVVLLGWLG-AKQKHLRKYAEWYTSK-GFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDEGKNLVFHT 240 (440)
Q Consensus 163 ~~~plVVLlGW~G-A~~khl~KYa~iY~~~-G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~~~~Il~H~ 240 (440)
...||||.||-++ |...-+...+++-.+. |.-+..+.... +.- -++-+...+.++.+-+.|.. .++-...+-+-|
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~ig~-~~~-~s~~~~~~~Qv~~vce~l~~-~~~L~~G~naIG 101 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVEIGN-GVQ-DSLFMPLRQQASIACEKIKQ-MKELSEGYNIVA 101 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEEECC-Ccc-cccccCHHHHHHHHHHHHhc-chhhcCceEEEE
Confidence 4579999999873 2223577776666544 66444333211 110 01101122334444444433 122256788999
Q ss_pred ecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCC
Q 040744 241 FSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPV 277 (440)
Q Consensus 241 FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg 277 (440)
||=||-++ +.+++ +.+. ..+|+-+|-=++|-
T Consensus 102 fSQGglfl-Ra~ie----rc~~-~p~V~nlISlggph 132 (306)
T PLN02606 102 ESQGNLVA-RGLIE----FCDN-APPVINYVSLGGPH 132 (306)
T ss_pred EcchhHHH-HHHHH----HCCC-CCCcceEEEecCCc
Confidence 99999864 33333 2221 13566666555543
No 168
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=41.83 E-value=2.8e+02 Score=28.81 Aligned_cols=102 Identities=18% Similarity=0.197 Sum_probs=60.3
Q ss_pred CCCCeEEEEeeecCC-chhhHHHHHHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhcCCcEEEEE
Q 040744 162 MKSRTVVVLLGWLGA-KQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDEGKNLVFHT 240 (440)
Q Consensus 162 ~~~~plVVLlGW~GA-~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~~~~Il~H~ 240 (440)
+..+.||++.|-.|. +---++|.+.+|.+.|+.|+..-..+ | |+ -.++.|..|-+..+-+++-|-
T Consensus 136 ~~~p~Vil~vGVNG~GKTTTIaKLA~~l~~~g~~VllaA~DT---F------RA-----aAiEQL~~w~er~gv~vI~~~ 201 (340)
T COG0552 136 EKKPFVILFVGVNGVGKTTTIAKLAKYLKQQGKSVLLAAGDT---F------RA-----AAIEQLEVWGERLGVPVISGK 201 (340)
T ss_pred CCCcEEEEEEecCCCchHhHHHHHHHHHHHCCCeEEEEecch---H------HH-----HHHHHHHHHHHHhCCeEEccC
Confidence 345778899999994 44459999999999999998853321 1 11 122333333333355666653
Q ss_pred -ecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCCCCChhh
Q 040744 241 -FSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVASPDPQV 284 (440)
Q Consensus 241 -FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~~~~~~~ 284 (440)
=|-=++.+|..+..+-. ..+.-+|.|-+--.-+..++
T Consensus 202 ~G~DpAaVafDAi~~Aka-------r~~DvvliDTAGRLhnk~nL 239 (340)
T COG0552 202 EGADPAAVAFDAIQAAKA-------RGIDVVLIDTAGRLHNKKNL 239 (340)
T ss_pred CCCCcHHHHHHHHHHHHH-------cCCCEEEEeCcccccCchhH
Confidence 11113345555544433 35677999986655444443
No 169
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=41.56 E-value=1.8e+02 Score=25.89 Aligned_cols=33 Identities=21% Similarity=0.519 Sum_probs=21.5
Q ss_pred CCCCeEEE-EeeecCCchhhHHHH-HHHHHHCCCe
Q 040744 162 MKSRTVVV-LLGWLGAKQKHLRKY-AEWYTSKGFH 194 (440)
Q Consensus 162 ~~~~plVV-LlGW~GA~~khl~KY-a~iY~~~G~n 194 (440)
...+|||+ +|||.|.-.-++++- ++-....|..
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~ 83 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMK 83 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHhcccC
Confidence 34566666 999999776677777 4442345653
No 170
>PLN02633 palmitoyl protein thioesterase family protein
Probab=40.49 E-value=2.1e+02 Score=29.39 Aligned_cols=107 Identities=11% Similarity=0.068 Sum_probs=58.2
Q ss_pred CCCCeEEEEeeecC-CchhhHHHHHHHHHHC-CCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhcCCcEEEE
Q 040744 162 MKSRTVVVLLGWLG-AKQKHLRKYAEWYTSK-GFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDEGKNLVFH 239 (440)
Q Consensus 162 ~~~~plVVLlGW~G-A~~khl~KYa~iY~~~-G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~~~~Il~H 239 (440)
....|+|+.||=++ |...-|.+.+++-.+. |.-+.++.......-++ ++ ...+.++.+-+.|.. .++-...+-+-
T Consensus 23 ~~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~ig~~~~~s~-~~-~~~~Qve~vce~l~~-~~~l~~G~naI 99 (314)
T PLN02633 23 SVSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEIGNGVGDSW-LM-PLTQQAEIACEKVKQ-MKELSQGYNIV 99 (314)
T ss_pred cCCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEECCCccccc-ee-CHHHHHHHHHHHHhh-chhhhCcEEEE
Confidence 44579999999877 3334688888888765 55444433322100000 11 122334444444433 12225679999
Q ss_pred EecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCC
Q 040744 240 TFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPV 277 (440)
Q Consensus 240 ~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg 277 (440)
|||=||-++ +.+++.. +. ..+|+-+|-=++|-
T Consensus 100 GfSQGGlfl-Ra~ierc----~~-~p~V~nlISlggph 131 (314)
T PLN02633 100 GRSQGNLVA-RGLIEFC----DG-GPPVYNYISLAGPH 131 (314)
T ss_pred EEccchHHH-HHHHHHC----CC-CCCcceEEEecCCC
Confidence 999999864 3333322 21 13566666555443
No 171
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=35.07 E-value=3.2e+02 Score=27.75 Aligned_cols=104 Identities=11% Similarity=0.116 Sum_probs=53.2
Q ss_pred CeEEEEeeecCCch-hhHHHHHHHHHHC-CCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhcCCcEEEEEec
Q 040744 165 RTVVVLLGWLGAKQ-KHLRKYAEWYTSK-GFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDEGKNLVFHTFS 242 (440)
Q Consensus 165 ~plVVLlGW~GA~~-khl~KYa~iY~~~-G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~~~~Il~H~FS 242 (440)
.|+|++||-+++.. --++...+...+. |--|.+...... +.-.+-...++.++.+-+.+. -.++-+..+.+-|+|
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig~g--~~~s~l~pl~~Qv~~~ce~v~-~m~~lsqGynivg~S 100 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIGDG--IKDSSLMPLWEQVDVACEKVK-QMPELSQGYNIVGYS 100 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEecCC--cchhhhccHHHHHHHHHHHHh-cchhccCceEEEEEc
Confidence 89999999888332 2255556655564 333333222111 100111122222333333332 111227899999999
Q ss_pred ccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCC
Q 040744 243 NTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVA 278 (440)
Q Consensus 243 nGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~ 278 (440)
-||-.+ +.+++... . .+|+-.|==++|-.
T Consensus 101 QGglv~-Raliq~cd----~--ppV~n~ISL~gPha 129 (296)
T KOG2541|consen 101 QGGLVA-RALIQFCD----N--PPVKNFISLGGPHA 129 (296)
T ss_pred cccHHH-HHHHHhCC----C--CCcceeEeccCCcC
Confidence 999853 44444332 1 46777776666654
No 172
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=33.95 E-value=52 Score=36.08 Aligned_cols=60 Identities=20% Similarity=0.187 Sum_probs=41.6
Q ss_pred CCCCCCEEEEEcCCCCccCHHHH-------HHHHHHHHHcCCceEEEEeCCCccccccccC---hHHHHH
Q 040744 364 GQPACPQLYIYSSADRVIPAESV-------ESFIEEQRKAGREVRACNFVSTPHVDHFRND---PKLYTT 423 (440)
Q Consensus 364 ~~~~~P~LYIYS~aD~lIP~~dV-------E~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~---PeeY~~ 423 (440)
+..+||+..+.|..|.+.|++.+ -.-.++.+..|-.+-...=++.+|-+.|-+- .+|+.+
T Consensus 294 r~Ir~Piivfas~gDnITPP~QaL~WI~dlY~~~~ei~a~gQ~IVY~~h~~vGHLGIFVS~~VarkEH~~ 363 (581)
T PF11339_consen 294 RNIRSPIIVFASYGDNITPPQQALNWIPDLYPDTEEIKAAGQTIVYLLHESVGHLGIFVSGKVARKEHRE 363 (581)
T ss_pred hhCCCCEEEEeccCCCCCChhHhccchHhhcCCHHHHHhCCCEEEEEecCCCCceEEEeccHhhHHHHHH
Confidence 55789999999999999999876 2222344556665555556777888877654 455543
No 173
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=33.73 E-value=1e+02 Score=32.25 Aligned_cols=61 Identities=21% Similarity=0.313 Sum_probs=46.9
Q ss_pred CCCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccc--cccChHHHHHHHHHHHHH
Q 040744 366 PACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDH--FRNDPKLYTTQLSQFLED 431 (440)
Q Consensus 366 ~~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H--~R~~PeeY~~aV~~FL~~ 431 (440)
.+.|.|.+-.+.|.+.|.++..+.++..+..|. .+.+ +|+| +| |-.+.+.|-..|.+||+.
T Consensus 305 i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~---~~~i-~S~~-GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 305 IKAPVLVVGITSDWLFPPELQRALAEALPAAGA---LREI-DSPY-GHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred CccCEEEEEecccccCCHHHHHHHHHhccccCc---eEEe-cCCC-CchhhhcchhhhhHHHHHHhhc
Confidence 568999999999999999999999998776653 3333 3444 44 445667788999999974
No 174
>PLN02454 triacylglycerol lipase
Probab=33.37 E-value=1.4e+02 Score=31.92 Aligned_cols=60 Identities=17% Similarity=0.096 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHhhhc---CCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCC
Q 040744 218 IELLVNHLADCLEDE---GKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPV 277 (440)
Q Consensus 218 l~~l~~~i~~~l~~~---~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg 277 (440)
.++++..|...++.. +..|++=|.|+||+++.-.-.+...........+|..+.|=|.-.
T Consensus 209 r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRV 271 (414)
T PLN02454 209 RSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQV 271 (414)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCcc
Confidence 345666665554433 235999999999998743222222221111123577888877443
No 175
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=32.82 E-value=70 Score=32.39 Aligned_cols=58 Identities=24% Similarity=0.302 Sum_probs=47.9
Q ss_pred EEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccChHHHHHHHHHHHHHHH
Q 040744 371 LYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDYV 433 (440)
Q Consensus 371 LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~~ 433 (440)
.++--++|..||-.-|-++-+.| .|++|+.. ..+||..|-.+-+++.++|.+-|++.-
T Consensus 310 ivv~A~~D~Yipr~gv~~lQ~~W--Pg~eVr~~---egGHVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 310 IVVQAKEDAYIPRTGVRSLQEIW--PGCEVRYL---EGGHVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred EEEEecCCccccccCcHHHHHhC--CCCEEEEe---ecCceeeeehhchHHHHHHHHHHHhhh
Confidence 56778999999998888877765 46665544 489999999999999999999998765
No 176
>TIGR03596 GTPase_YlqF ribosome biogenesis GTP-binding protein YlqF. Members of this protein family are GTP-binding proteins involved in ribosome biogenesis, including the essential YlqF protein of Bacillus subtilis, which is an essential protein. They are related to Era, EngA, and other GTPases of ribosome biogenesis, but are circularly permuted. This family is not universal, and is not present in Escherichia coli, and so is not as well studied as some other GTPases. This model is built for bacterial members.
Probab=32.61 E-value=4.2e+02 Score=26.07 Aligned_cols=74 Identities=11% Similarity=0.254 Sum_probs=42.3
Q ss_pred CCeEEEEeeecCCc-hhhHHHHHHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhc----------
Q 040744 164 SRTVVVLLGWLGAK-QKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDE---------- 232 (440)
Q Consensus 164 ~~plVVLlGW~GA~-~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~---------- 232 (440)
++++|+++.=.+-- +..+.++.+.|.+.|+.++.++.... .| ++.+.+.+.+.+.+.
T Consensus 48 ~kp~IiVlNK~DL~~~~~~~~~~~~~~~~~~~vi~iSa~~~------~g------i~~L~~~i~~~~~~~~~~~~~~~~~ 115 (276)
T TIGR03596 48 NKPRLIVLNKADLADPAVTKQWLKYFEEKGIKALAINAKKG------KG------VKKIIKAAKKLLKEKNEKLKAKGLK 115 (276)
T ss_pred CCCEEEEEEccccCCHHHHHHHHHHHHHcCCeEEEEECCCc------cc------HHHHHHHHHHHHHHhhhhhhhccCC
Confidence 46777777666532 22356666677777777766554321 11 123333333332221
Q ss_pred --CCcEEEEEecccHHHHH
Q 040744 233 --GKNLVFHTFSNTGWLTY 249 (440)
Q Consensus 233 --~~~Il~H~FSnGG~~~~ 249 (440)
.-.+++-|.+|-|-.++
T Consensus 116 ~~~~~~~~vG~~nvGKSsl 134 (276)
T TIGR03596 116 NRPIRAMIVGIPNVGKSTL 134 (276)
T ss_pred CCCeEEEEECCCCCCHHHH
Confidence 23699999999998774
No 177
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=32.28 E-value=95 Score=32.93 Aligned_cols=65 Identities=12% Similarity=0.065 Sum_probs=46.8
Q ss_pred CCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCccccccccC--hHHHHHHHHHHHHHH
Q 040744 367 ACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRND--PKLYTTQLSQFLEDY 432 (440)
Q Consensus 367 ~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~~--PeeY~~aV~~FL~~~ 432 (440)
..|..+.||+.|.++..+||+.+......... ...+.+++=.|.+-.-.+ +++=.+.|-+++++.
T Consensus 332 ~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~~-~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~ 398 (403)
T KOG2624|consen 332 KVPTALYYGDNDWLADPEDVLILLLVLPNSVI-KYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLF 398 (403)
T ss_pred ccCEEEEecCCcccCCHHHHHHHHHhcccccc-cccccCCCccceeeeeccCcHHHHHHHHHHHHHhh
Confidence 68999999999999999999999987655432 333446777777766655 555445666665544
No 178
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=31.37 E-value=2.7e+02 Score=27.48 Aligned_cols=92 Identities=14% Similarity=0.132 Sum_probs=57.1
Q ss_pred EEeeecCCchhhHHHHHHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhcCCcEEEEEec-ccHHH
Q 040744 169 VLLGWLGAKQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDEGKNLVFHTFS-NTGWL 247 (440)
Q Consensus 169 VLlGW~GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~~~~Il~H~FS-nGG~~ 247 (440)
|+.|=.+..-+...+.++.+++.|.+.+++..|.-. ... + +.++++..+..+..+.||+++-+- ..|..
T Consensus 73 vi~gv~~~st~~~i~~a~~a~~~Gad~v~v~~P~~~----~~s---~---~~l~~y~~~ia~~~~~pi~iYn~P~~tg~~ 142 (289)
T PF00701_consen 73 VIAGVGANSTEEAIELARHAQDAGADAVLVIPPYYF----KPS---Q---EELIDYFRAIADATDLPIIIYNNPARTGND 142 (289)
T ss_dssp EEEEEESSSHHHHHHHHHHHHHTT-SEEEEEESTSS----SCC---H---HHHHHHHHHHHHHSSSEEEEEEBHHHHSST
T ss_pred EEecCcchhHHHHHHHHHHHhhcCceEEEEeccccc----cch---h---hHHHHHHHHHHhhcCCCEEEEECCCccccC
Confidence 334555667788999999999999999988877421 111 1 345666666554447899999885 34433
Q ss_pred HHHHHHHHHhhcCCCCccCceEEEecCCC
Q 040744 248 TYGAILEKFQNKDPSLMGRIRGCIVDSAP 276 (440)
Q Consensus 248 ~~~~Ll~~l~~~~~~l~~~VkG~I~DSaP 276 (440)
.--.+++.+.+ .++|+|+- ||+.
T Consensus 143 ls~~~l~~L~~-----~~nv~giK-~s~~ 165 (289)
T PF00701_consen 143 LSPETLARLAK-----IPNVVGIK-DSSG 165 (289)
T ss_dssp SHHHHHHHHHT-----STTEEEEE-ESSS
T ss_pred CCHHHHHHHhc-----CCcEEEEE-cCch
Confidence 22233344443 25788887 5543
No 179
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=31.15 E-value=3.7e+02 Score=26.02 Aligned_cols=85 Identities=13% Similarity=0.243 Sum_probs=45.8
Q ss_pred CCeEEEEecCCC--cee---ecccchhhhHHHHHHHHHHHHHhhhcCCcEEEEEecccHHHHHHHHHHHHhhcCCCCccC
Q 040744 192 GFHVITFTFPMA--EIL---SYQVGGKAEQNIELLVNHLADCLEDEGKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGR 266 (440)
Q Consensus 192 G~nVL~~~~p~~--~il---~~~~g~k~~k~l~~l~~~i~~~l~~~~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~ 266 (440)
|+++..+.+|-+ -+. ...++.....-.+.|.+.|..... ..+++++-|+|.|+..+...+.+........ . .
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~-~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~-~-~ 78 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA-AGGPVVVFGYSQGAVVASNVLRRLAADGDPP-P-D 78 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc-CCCCEEEEEECHHHHHHHHHHHHHHhcCCCC-c-C
Confidence 567777777752 110 112222222223444444432211 4789999999999997655554444322221 1 2
Q ss_pred ceEEEecCCCCCC
Q 040744 267 IRGCIVDSAPVAS 279 (440)
Q Consensus 267 VkG~I~DSaPg~~ 279 (440)
.-.+|+.+-|..+
T Consensus 79 ~l~fVl~gnP~rp 91 (225)
T PF08237_consen 79 DLSFVLIGNPRRP 91 (225)
T ss_pred ceEEEEecCCCCC
Confidence 3458888888664
No 180
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=30.87 E-value=1.1e+02 Score=34.47 Aligned_cols=47 Identities=21% Similarity=0.268 Sum_probs=39.9
Q ss_pred CCCEEEEEcCCCCccCHHHHHHHHHHHHHcCCceEEEEeCCCcccccccc
Q 040744 367 ACPQLYIYSSADRVIPAESVESFIEEQRKAGREVRACNFVSTPHVDHFRN 416 (440)
Q Consensus 367 ~~P~LYIYS~aD~lIP~~dVE~~~e~~r~~G~~V~~~~F~~S~HV~H~R~ 416 (440)
+.|.||+-|.+|.+++.+.+|++.+..+. +++.+..+++.|-.-...
T Consensus 304 k~PVLFV~Gsnd~mcspn~ME~vreKMqA---~~elhVI~~adhsmaipk 350 (784)
T KOG3253|consen 304 KQPVLFVIGSNDHMCSPNSMEEVREKMQA---EVELHVIGGADHSMAIPK 350 (784)
T ss_pred CCceEEEecCCcccCCHHHHHHHHHHhhc---cceEEEecCCCccccCCc
Confidence 46999999999999999999999987764 477888899999876655
No 181
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=30.83 E-value=2.5e+02 Score=30.57 Aligned_cols=105 Identities=18% Similarity=0.247 Sum_probs=57.1
Q ss_pred CCCCCCCCce-eeecCCCCccccCCCCCcCCCCCCeEEEEee---ecCCchhhHHHH-HHHHHHCC-CeEEEEecCCCc-
Q 040744 132 IPASYSDVLY-RWHLPETDAIDVSGTSDCLAMKSRTVVVLLG---WLGAKQKHLRKY-AEWYTSKG-FHVITFTFPMAE- 204 (440)
Q Consensus 132 ~p~~~~~~~y-~~~~p~~~~~~~~~~~~~~~~~~~plVVLlG---W~GA~~khl~KY-a~iY~~~G-~nVL~~~~p~~~- 204 (440)
....+.|-+| ||--|+ .. +++.|-+|.||| -||+.-. .-| -....++| +.||++.++..-
T Consensus 72 ~~~~sEDCL~LNIwaP~-~~----------a~~~PVmV~IHGG~y~~Gs~s~--~~ydgs~La~~g~vVvVSvNYRLG~l 138 (491)
T COG2272 72 DFTGSEDCLYLNIWAPE-VP----------AEKLPVMVYIHGGGYIMGSGSE--PLYDGSALAARGDVVVVSVNYRLGAL 138 (491)
T ss_pred cCCccccceeEEeeccC-CC----------CCCCcEEEEEeccccccCCCcc--cccChHHHHhcCCEEEEEeCcccccc
Confidence 3467788888 877777 11 123355666998 2333321 133 22334455 888888888642
Q ss_pred -eeecc-cc--hh-----hhHHHHHHHHHHHHHhhh---cCCcEEEEEecccHHHHH
Q 040744 205 -ILSYQ-VG--GK-----AEQNIELLVNHLADCLED---EGKNLVFHTFSNTGWLTY 249 (440)
Q Consensus 205 -il~~~-~g--~k-----~~k~l~~l~~~i~~~l~~---~~~~Il~H~FSnGG~~~~ 249 (440)
++... .+ .. ...+....++|+.+-++. ++..|-+.|-|-||....
T Consensus 139 GfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~ 195 (491)
T COG2272 139 GFLDLSSLDTEDAFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASIL 195 (491)
T ss_pred eeeehhhccccccccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHH
Confidence 22111 11 00 111223344555443322 378999999999998653
No 182
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=29.27 E-value=88 Score=31.33 Aligned_cols=43 Identities=21% Similarity=0.268 Sum_probs=29.5
Q ss_pred cchhhhHHHHHHHHHHHHHhhhc----CCcEEEEEecccHHHHHHHH
Q 040744 210 VGGKAEQNIELLVNHLADCLEDE----GKNLVFHTFSNTGWLTYGAI 252 (440)
Q Consensus 210 ~g~k~~k~l~~l~~~i~~~l~~~----~~~Il~H~FSnGG~~~~~~L 252 (440)
.|+..+..++-|.+.+.-++++. ..+..+.|.|+||-+++-.|
T Consensus 109 ~gGg~~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aL 155 (264)
T COG2819 109 FGGGGDAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFAL 155 (264)
T ss_pred CCCChHHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHH
Confidence 44444455566666666666664 56799999999999985444
No 183
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=29.15 E-value=72 Score=29.60 Aligned_cols=59 Identities=15% Similarity=0.242 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhhhc-CCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCCC
Q 040744 218 IELLVNHLADCLEDE-GKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPVA 278 (440)
Q Consensus 218 l~~l~~~i~~~l~~~-~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg~ 278 (440)
...+.+.|.++...- +.+|++-|+|-|+..+-..+.+ .........+|.++|+=.-|..
T Consensus 64 ~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~--~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 64 VANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSG--DGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH--TTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHh--ccCChhhhhhEEEEEEecCCcc
Confidence 344555555544333 6699999999999876433322 0011123468888887555544
No 184
>PF08255 Leader_Trp: Trp-operon Leader Peptide; InterPro: IPR013205 The tryptophan operon regulatory region of Citrobacter freundii (leader transcript) encodes a 14-residue peptide containing characteristic tandem tryptophan residues. It is about 10 nucleotides shorter than those of Escherichia coli and Salmonella typhimurium [].
Probab=28.00 E-value=50 Score=18.29 Aligned_cols=10 Identities=30% Similarity=0.820 Sum_probs=8.2
Q ss_pred CeEEEEeeec
Q 040744 165 RTVVVLLGWL 174 (440)
Q Consensus 165 ~plVVLlGW~ 174 (440)
+.++.||||.
T Consensus 2 ~a~~~L~~WW 11 (14)
T PF08255_consen 2 KATFSLHGWW 11 (14)
T ss_pred ceEEEEeeEE
Confidence 4688999996
No 185
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=27.71 E-value=1.1e+02 Score=29.39 Aligned_cols=54 Identities=15% Similarity=0.212 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhhhc--CCcEEEEEecccHHHHHHHHHHHHhhcCCCCccC-ceEEEecC
Q 040744 219 ELLVNHLADCLEDE--GKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGR-IRGCIVDS 274 (440)
Q Consensus 219 ~~l~~~i~~~l~~~--~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~-VkG~I~DS 274 (440)
.++.+.-..|++.. .+|+|+-|+|=|+.+... |+......++ +..+ |.+.++..
T Consensus 78 ~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~-LL~e~~~~~p-l~~rLVAAYliG~ 134 (207)
T PF11288_consen 78 SDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLR-LLKEEIAGDP-LRKRLVAAYLIGY 134 (207)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHH-HHHHHhcCch-HHhhhheeeecCc
Confidence 45555555566554 779999999999987533 3333322333 4333 44555554
No 186
>PLN00413 triacylglycerol lipase
Probab=26.99 E-value=1.4e+02 Score=32.31 Aligned_cols=58 Identities=12% Similarity=0.194 Sum_probs=32.2
Q ss_pred HHHHHHHHHhhhc-CCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCc-eEEEecCCCC
Q 040744 220 LLVNHLADCLEDE-GKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRI-RGCIVDSAPV 277 (440)
Q Consensus 220 ~l~~~i~~~l~~~-~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~V-kG~I~DSaPg 277 (440)
.+.+.+.+.+++. ..+|++=|.|+||+++.-.-.............++ ..+-|.+.-.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRV 328 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRV 328 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCC
Confidence 3455565555555 66899999999999764222221111111222344 4567777443
No 187
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=26.95 E-value=1.4e+02 Score=31.63 Aligned_cols=109 Identities=12% Similarity=0.119 Sum_probs=63.5
Q ss_pred CCCCeEEEEeeecCCchhhHHH-----HHHHHHHCCCeEEEEecCCC--------------ceee-cccchhhhHHHHHH
Q 040744 162 MKSRTVVVLLGWLGAKQKHLRK-----YAEWYTSKGFHVITFTFPMA--------------EILS-YQVGGKAEQNIELL 221 (440)
Q Consensus 162 ~~~~plVVLlGW~GA~~khl~K-----Ya~iY~~~G~nVL~~~~p~~--------------~il~-~~~g~k~~k~l~~l 221 (440)
++.|+|.+.||=+++..--+.- -+-++.+.||+|-+=..+-. .-++ +++..-...++-.+
T Consensus 71 ~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~ 150 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAM 150 (403)
T ss_pred CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHH
Confidence 4557788899988766544332 25578899999987544411 1011 22222233445555
Q ss_pred HHHHHHHhhhcCCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCC
Q 040744 222 VNHLADCLEDEGKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPV 277 (440)
Q Consensus 222 ~~~i~~~l~~~~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg 277 (440)
+++|.+. .....|..=|+|=|+...+..+.+ .+....+|+-+++=+..+
T Consensus 151 IdyIL~~--T~~~kl~yvGHSQGtt~~fv~lS~-----~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 151 IDYILEK--TGQEKLHYVGHSQGTTTFFVMLSE-----RPEYNKKIKSFIALAPAA 199 (403)
T ss_pred HHHHHHh--ccccceEEEEEEccchhheehhcc-----cchhhhhhheeeeecchh
Confidence 5555432 126899999999999876533322 222335677777766443
No 188
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=26.61 E-value=1.8e+02 Score=25.93 Aligned_cols=38 Identities=32% Similarity=0.470 Sum_probs=26.5
Q ss_pred HHHHHHHHHHhhhc--CCcEE--EEEecccHHHHHHHH-HHHH
Q 040744 219 ELLVNHLADCLEDE--GKNLV--FHTFSNTGWLTYGAI-LEKF 256 (440)
Q Consensus 219 ~~l~~~i~~~l~~~--~~~Il--~H~FSnGG~~~~~~L-l~~l 256 (440)
+.+++.|.+++... ++|++ |||.|..|-+..+.| ++++
T Consensus 35 ~~v~~ai~~~l~~~~p~KpLVlSfHG~tGtGKn~v~~liA~~l 77 (127)
T PF06309_consen 35 EVVVNAIKGHLANPNPRKPLVLSFHGWTGTGKNFVSRLIAEHL 77 (127)
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEeecCCCCcHHHHHHHHHHHH
Confidence 56667777777554 66777 999999998765544 4443
No 189
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=26.14 E-value=2.4e+02 Score=31.68 Aligned_cols=115 Identities=17% Similarity=0.270 Sum_probs=62.0
Q ss_pred cCCCCCcCCCCCCeEEE-Eee--ecCCchhhHHHH-HHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHH
Q 040744 153 VSGTSDCLAMKSRTVVV-LLG--WLGAKQKHLRKY-AEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADC 228 (440)
Q Consensus 153 ~~~~~~~~~~~~~plVV-LlG--W~GA~~khl~KY-a~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~ 228 (440)
...+|-.|.+.++.+|+ .|| +..-..|--..| .+|-+.+||-+|.+++..+..- .+. +.++.+.-.-...
T Consensus 384 ~~~~wh~P~p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEa--PFP----RaleEv~fAYcW~ 457 (880)
T KOG4388|consen 384 SLELWHRPAPRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEA--PFP----RALEEVFFAYCWA 457 (880)
T ss_pred ccccCCCCCCCCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCC--CCC----cHHHHHHHHHHHH
Confidence 44455555556666655 333 211222334455 5556789999999988654221 111 1222222111111
Q ss_pred hhh------cCCcEEEEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCCCC
Q 040744 229 LED------EGKNLVFHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSAPV 277 (440)
Q Consensus 229 l~~------~~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSaPg 277 (440)
+.+ ...+|++-|=|-||-++++.-+...+.. -.. -.|+++-=+|.
T Consensus 458 inn~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~g-vRv---PDGl~laY~pt 508 (880)
T KOG4388|consen 458 INNCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYG-VRV---PDGLMLAYPPT 508 (880)
T ss_pred hcCHHHhCcccceEEEeccCCCcceeehhHHHHHHhC-CCC---CCceEEecChh
Confidence 111 2679999999999998877666665532 112 24666555553
No 190
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=26.08 E-value=37 Score=29.42 Aligned_cols=16 Identities=25% Similarity=0.575 Sum_probs=9.0
Q ss_pred CCCCeEEEEeeecCCc
Q 040744 162 MKSRTVVVLLGWLGAK 177 (440)
Q Consensus 162 ~~~~plVVLlGW~GA~ 177 (440)
.+..||+++|||=|+=
T Consensus 90 ~~aiPLll~HGWPgSf 105 (112)
T PF06441_consen 90 PNAIPLLLLHGWPGSF 105 (112)
T ss_dssp TT-EEEEEE--SS--G
T ss_pred CCCeEEEEECCCCccH
Confidence 4457999999999974
No 191
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=25.64 E-value=7e+02 Score=26.84 Aligned_cols=43 Identities=23% Similarity=0.363 Sum_probs=33.1
Q ss_pred cCCCCCCeEEEEeeecCC-chhhHHHHHHHHHHCCCeEEEEecC
Q 040744 159 CLAMKSRTVVVLLGWLGA-KQKHLRKYAEWYTSKGFHVITFTFP 201 (440)
Q Consensus 159 ~~~~~~~plVVLlGW~GA-~~khl~KYa~iY~~~G~nVL~~~~p 201 (440)
.+....+.||++.|--|+ +..-..||+..|+++||.+..+...
T Consensus 95 ~~~K~kpsVimfVGLqG~GKTTtc~KlA~y~kkkG~K~~LvcaD 138 (483)
T KOG0780|consen 95 QPKKGKPSVIMFVGLQGSGKTTTCTKLAYYYKKKGYKVALVCAD 138 (483)
T ss_pred ccccCCCcEEEEEeccCCCcceeHHHHHHHHHhcCCceeEEeec
Confidence 334566789999999884 4445999999999999988776443
No 192
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=25.11 E-value=2.2e+02 Score=29.24 Aligned_cols=88 Identities=19% Similarity=0.335 Sum_probs=57.0
Q ss_pred CCchhhHHHHHHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhcCCcEEEEEecccHHHHHHHHHH
Q 040744 175 GAKQKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDEGKNLVFHTFSNTGWLTYGAILE 254 (440)
Q Consensus 175 GA~~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~~~~Il~H~FSnGG~~~~~~Ll~ 254 (440)
||.|.-=.-|+.-..++|+||+.+. + .+..++.+.++|.+-.+ -.-+++.+=|.+|-. .|..|.+
T Consensus 56 GaTDGIGKayA~eLAkrG~nvvLIs-R------------t~~KL~~v~kEI~~~~~-vev~~i~~Dft~~~~-~ye~i~~ 120 (312)
T KOG1014|consen 56 GATDGIGKAYARELAKRGFNVVLIS-R------------TQEKLEAVAKEIEEKYK-VEVRIIAIDFTKGDE-VYEKLLE 120 (312)
T ss_pred CCCCcchHHHHHHHHHcCCEEEEEe-C------------CHHHHHHHHHHHHHHhC-cEEEEEEEecCCCch-hHHHHHH
Confidence 7888878889999999999987752 2 12234555555543211 146888889999988 7888888
Q ss_pred HHhhcCCCCccCceEEEecCCCCC
Q 040744 255 KFQNKDPSLMGRIRGCIVDSAPVA 278 (440)
Q Consensus 255 ~l~~~~~~l~~~VkG~I~DSaPg~ 278 (440)
.+..-+-...-+-.|+-.|. |..
T Consensus 121 ~l~~~~VgILVNNvG~~~~~-P~~ 143 (312)
T KOG1014|consen 121 KLAGLDVGILVNNVGMSYDY-PES 143 (312)
T ss_pred HhcCCceEEEEecccccCCC-cHH
Confidence 77653322222334565665 543
No 193
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=24.30 E-value=2.4e+02 Score=24.78 Aligned_cols=57 Identities=18% Similarity=0.349 Sum_probs=35.4
Q ss_pred CCceeeecCCCCccccCCCCCcCCCCCCeEEEEee--ecC--Cc----------------hhhHH---HHHHHHHHCCCe
Q 040744 138 DVLYRWHLPETDAIDVSGTSDCLAMKSRTVVVLLG--WLG--AK----------------QKHLR---KYAEWYTSKGFH 194 (440)
Q Consensus 138 ~~~y~~~~p~~~~~~~~~~~~~~~~~~~plVVLlG--W~G--A~----------------~khl~---KYa~iY~~~G~n 194 (440)
++-|+...|...+. .|+--.+.+-+|.++| |-| |+ ++++. +-.+.+.++|+.
T Consensus 35 G~rfR~q~~~lpg~-----pD~~~~~~klaIfVDGcfWHgh~c~~~~~pk~n~~fW~~Ki~~n~~rD~~~~~~L~~~Gw~ 109 (117)
T TIGR00632 35 GLRFRLQDASLPGT-----PDIVFDEYRCVIFIHGCFWHGHHCYLGKVPKTRTDFWSPKIEKNVERDRRVNSRLQELGWR 109 (117)
T ss_pred CCEEEEecCCCCCc-----ccEEecCCCEEEEEcccccccCCcccccCCCccHHHHHHHHHHHHHHHHHHHHHHHHCcCE
Confidence 66687777655433 3433357789999988 565 31 11111 135667889999
Q ss_pred EEEEe
Q 040744 195 VITFT 199 (440)
Q Consensus 195 VL~~~ 199 (440)
||+|.
T Consensus 110 Vlr~W 114 (117)
T TIGR00632 110 VLRVW 114 (117)
T ss_pred EEEEe
Confidence 99874
No 194
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=24.05 E-value=3.3e+02 Score=26.99 Aligned_cols=77 Identities=16% Similarity=0.222 Sum_probs=41.7
Q ss_pred hhHHHHHHHH-HHCCCeEEE-EecCCCc---------------eeecccchhhhHHHHHHHHHHHHHhhhcCCcEEEEEe
Q 040744 179 KHLRKYAEWY-TSKGFHVIT-FTFPMAE---------------ILSYQVGGKAEQNIELLVNHLADCLEDEGKNLVFHTF 241 (440)
Q Consensus 179 khl~KYa~iY-~~~G~nVL~-~~~p~~~---------------il~~~~g~k~~k~l~~l~~~i~~~l~~~~~~Il~H~F 241 (440)
-++.|-.+.| ...+-..+. |...... .+....|...+..+......|.+.. +...+|.+.||
T Consensus 21 TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay~~l~~~~-~~gd~I~lfGF 99 (277)
T PF09994_consen 21 TNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAYRFLSKNY-EPGDRIYLFGF 99 (277)
T ss_pred cHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHHHHHHhcc-CCcceEEEEec
Confidence 5688888888 344433333 3333332 0111122223444444444443322 23678999999
Q ss_pred cccHHHHHHHHHHHHh
Q 040744 242 SNTGWLTYGAILEKFQ 257 (440)
Q Consensus 242 SnGG~~~~~~Ll~~l~ 257 (440)
|=|+++ .+++...+.
T Consensus 100 SRGA~~-AR~~a~~i~ 114 (277)
T PF09994_consen 100 SRGAYT-ARAFANMID 114 (277)
T ss_pred CccHHH-HHHHHHHHh
Confidence 999996 455655553
No 195
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=23.95 E-value=2.9e+02 Score=29.99 Aligned_cols=72 Identities=17% Similarity=0.221 Sum_probs=42.4
Q ss_pred hhHHHHHHHHHHCCCe----EEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhc-CCcEEEEEecccHHHHHHHH
Q 040744 179 KHLRKYAEWYTSKGFH----VITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDE-GKNLVFHTFSNTGWLTYGAI 252 (440)
Q Consensus 179 khl~KYa~iY~~~G~n----VL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~-~~~Il~H~FSnGG~~~~~~L 252 (440)
.+..+-.+.--..||. ++.+-+.+. +++......++.+..|...|....+.+ .+++++-+.||||-+++..|
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwR--ls~~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl 200 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWR--LSYHNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFL 200 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchh--hccCChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHH
Confidence 4666667777777874 444333222 122222233444555555555445555 48999999999999876544
No 196
>cd00032 CASc Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide backbone adjacent to an aspartate. The resulting two subunits associate to form an (alpha)2(beta)2-tetramer which is the active enzyme. Activation of caspases can be mediated by other caspase homologs.
Probab=23.95 E-value=4.5e+02 Score=25.38 Aligned_cols=88 Identities=16% Similarity=0.214 Sum_probs=51.5
Q ss_pred hhhHHHHHHHHHHCCCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhh---cCCcEEEEEeccc----------
Q 040744 178 QKHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLED---EGKNLVFHTFSNT---------- 244 (440)
Q Consensus 178 ~khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~---~~~~Il~H~FSnG---------- 244 (440)
.+....-++.++++||+|..+.-... +.+.+.+.++.+. +..-+++-..|-|
T Consensus 31 ~~D~~~l~~~f~~lgF~V~~~~nlt~---------------~~~~~~l~~f~~~~~~~~d~~v~~~~sHG~~~~l~~~D~ 95 (243)
T cd00032 31 DVDAENLTKLFESLGYEVEVKNNLTA---------------EEILEELKEFASPDHSDSDSFVCVILSHGEEGGIYGTDG 95 (243)
T ss_pred HHHHHHHHHHHHHCCCEEEEeCCCCH---------------HHHHHHHHHHHhccCCCCCeeEEEECCCCCCCEEEEecC
Confidence 36688999999999999987643221 1222333333321 1334444444433
Q ss_pred HHHHHHHHHHHHhh-cCCCCccCceEEEecCCCCCCC
Q 040744 245 GWLTYGAILEKFQN-KDPSLMGRIRGCIVDSAPVASP 280 (440)
Q Consensus 245 G~~~~~~Ll~~l~~-~~~~l~~~VkG~I~DSaPg~~~ 280 (440)
....+..|++.+.. ..+.+....|=+|+|.|-+...
T Consensus 96 ~~v~l~~i~~~f~~~~~~sl~~kPKl~~iqACRg~~~ 132 (243)
T cd00032 96 DVVPIDEITSLFNGDNCPSLAGKPKLFFIQACRGDEL 132 (243)
T ss_pred cEEEHHHHHHhhccCCCccccCCCcEEEEECCCCCcC
Confidence 22334556665653 2345556778899999999864
No 197
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=23.64 E-value=4.3e+02 Score=23.21 Aligned_cols=43 Identities=14% Similarity=0.063 Sum_probs=30.6
Q ss_pred CCeEEEEeeecCCchhhHHHHH-HHHHHCCCeEEEEecCCCcee
Q 040744 164 SRTVVVLLGWLGAKQKHLRKYA-EWYTSKGFHVITFTFPMAEIL 206 (440)
Q Consensus 164 ~~plVVLlGW~GA~~khl~KYa-~iY~~~G~nVL~~~~p~~~il 206 (440)
...-|+-.|..|..-+++..+. .......++++.+.....++.
T Consensus 22 ~~~~v~n~g~~G~t~~~~~~~~~~~~~~~~pd~v~i~~G~ND~~ 65 (174)
T cd01841 22 KGKTVNNLGIAGISSRQYLEHIEPQLIQKNPSKVFLFLGTNDIG 65 (174)
T ss_pred CCCeEEecccccccHHHHHHHHHHHHHhcCCCEEEEEeccccCC
Confidence 3567889999998887766665 445566788887777766653
No 198
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=22.37 E-value=1.6e+02 Score=28.43 Aligned_cols=64 Identities=16% Similarity=0.191 Sum_probs=39.1
Q ss_pred CCEEEEEcCCC-CccCHHHHHHHHHHHHHcCCc---eEEEEeCCCcccccccc--ChHHHHHHHHHHHHHHHh
Q 040744 368 CPQLYIYSSAD-RVIPAESVESFIEEQRKAGRE---VRACNFVSTPHVDHFRN--DPKLYTTQLSQFLEDYVV 434 (440)
Q Consensus 368 ~P~LYIYS~aD-~lIP~~dVE~~~e~~r~~G~~---V~~~~F~~S~HV~H~R~--~PeeY~~aV~~FL~~~~~ 434 (440)
.|.+++||..+ ....|..+.... +++|+. |....|.+......... ...+|.+.+.+|++++..
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l---~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~ 71 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYL---KAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLA 71 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHH---HHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCcchhhCHHHHHHHH---HHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHH
Confidence 58999999998 667776655544 567875 78888876666443322 358899999999998763
No 199
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=22.21 E-value=4.3e+02 Score=26.68 Aligned_cols=85 Identities=13% Similarity=0.154 Sum_probs=54.0
Q ss_pred CeEEEEecCCCceeecccc--h--hhhHHHHHHHHHHHHHhhhc----CCcEEEEEecccHHHHHHHHHHHHhhcC---C
Q 040744 193 FHVITFTFPMAEILSYQVG--G--KAEQNIELLVNHLADCLEDE----GKNLVFHTFSNTGWLTYGAILEKFQNKD---P 261 (440)
Q Consensus 193 ~nVL~~~~p~~~il~~~~g--~--k~~k~l~~l~~~i~~~l~~~----~~~Il~H~FSnGG~~~~~~Ll~~l~~~~---~ 261 (440)
.|+|-++.|...-+++... . ..+...+++...|..+++.. ++++.+-|-|=||-..- .|+..+.++. +
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP-~la~~I~~~n~~~~ 80 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVP-ALVQEISQGNYICC 80 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHH-HHHHHHHhhccccc
Confidence 3778888898766664321 1 11223367777777777543 78999999999998653 2334343321 1
Q ss_pred CCccCceEEEecCCCCC
Q 040744 262 SLMGRIRGCIVDSAPVA 278 (440)
Q Consensus 262 ~l~~~VkG~I~DSaPg~ 278 (440)
...-++||+++-.+-..
T Consensus 81 ~~~inLkGi~IGNg~t~ 97 (319)
T PLN02213 81 EPPINLQGYMLGNPVTY 97 (319)
T ss_pred CCceeeeEEEeCCCCCC
Confidence 23358899999886554
No 200
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=22.21 E-value=1.6e+02 Score=31.85 Aligned_cols=63 Identities=21% Similarity=0.153 Sum_probs=45.3
Q ss_pred CCEEEEEcCCCCccCHHHHHHHHHHHHHc-CC-------ceEEEEeCCCccccccc-cChHHHHHHHHHHHH
Q 040744 368 CPQLYIYSSADRVIPAESVESFIEEQRKA-GR-------EVRACNFVSTPHVDHFR-NDPKLYTTQLSQFLE 430 (440)
Q Consensus 368 ~P~LYIYS~aD~lIP~~dVE~~~e~~r~~-G~-------~V~~~~F~~S~HV~H~R-~~PeeY~~aV~~FL~ 430 (440)
-..|..||-+|.+||+....+++++..+. |. -.+....+|-.||.--- ..+-.=..++.++++
T Consensus 354 GKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE 425 (474)
T PF07519_consen 354 GKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVE 425 (474)
T ss_pred CeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHh
Confidence 35688999999999999999999875332 32 25667779999999765 334444555555555
No 201
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=21.86 E-value=3.6e+02 Score=24.72 Aligned_cols=40 Identities=15% Similarity=0.116 Sum_probs=33.0
Q ss_pred CCCeEEEEeeecCC--chhhHHHHHHHHHHCCCeEEEEecCC
Q 040744 163 KSRTVVVLLGWLGA--KQKHLRKYAEWYTSKGFHVITFTFPM 202 (440)
Q Consensus 163 ~~~plVVLlGW~GA--~~khl~KYa~iY~~~G~nVL~~~~p~ 202 (440)
..+|+.++||-.+- ...+..++.+..++.|.++..+.+|-
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~ 184 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPG 184 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCc
Confidence 46899999998773 44788999999999999988877774
No 202
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=21.31 E-value=1.3e+02 Score=33.31 Aligned_cols=82 Identities=13% Similarity=0.171 Sum_probs=53.5
Q ss_pred HHHHCCCeEEEEecCCC---ceeecccchhhhHHHHHHHHHHHHHhhhc--CCcEEEEEecccHHHHHHHHHHHHhhcCC
Q 040744 187 WYTSKGFHVITFTFPMA---EILSYQVGGKAEQNIELLVNHLADCLEDE--GKNLVFHTFSNTGWLTYGAILEKFQNKDP 261 (440)
Q Consensus 187 iY~~~G~nVL~~~~p~~---~il~~~~g~k~~k~l~~l~~~i~~~l~~~--~~~Il~H~FSnGG~~~~~~Ll~~l~~~~~ 261 (440)
+|...||-|+..+.+-. +-.....+.+...+-.++++||++ +. ++.+..-|+|-+|.+.+..+ ..+
T Consensus 75 ~~aa~GYavV~qDvRG~~~SeG~~~~~~~~E~~Dg~D~I~Wia~---QpWsNG~Vgm~G~SY~g~tq~~~A----a~~-- 145 (563)
T COG2936 75 WFAAQGYAVVNQDVRGRGGSEGVFDPESSREAEDGYDTIEWLAK---QPWSNGNVGMLGLSYLGFTQLAAA----ALQ-- 145 (563)
T ss_pred eeecCceEEEEecccccccCCcccceeccccccchhHHHHHHHh---CCccCCeeeeecccHHHHHHHHHH----hcC--
Confidence 68889999999888732 211111111233344677777763 43 89999999999999875222 222
Q ss_pred CCccCceEEEecCCCCCC
Q 040744 262 SLMGRIRGCIVDSAPVAS 279 (440)
Q Consensus 262 ~l~~~VkG~I~DSaPg~~ 279 (440)
++.+|++|-.++..+.
T Consensus 146 --pPaLkai~p~~~~~D~ 161 (563)
T COG2936 146 --PPALKAIAPTEGLVDR 161 (563)
T ss_pred --Cchheeeccccccccc
Confidence 3578899988887764
No 203
>PLN02934 triacylglycerol lipase
Probab=21.08 E-value=2.6e+02 Score=30.74 Aligned_cols=30 Identities=20% Similarity=0.233 Sum_probs=22.2
Q ss_pred HHHHHHHHHhhhc-CCcEEEEEecccHHHHH
Q 040744 220 LLVNHLADCLEDE-GKNLVFHTFSNTGWLTY 249 (440)
Q Consensus 220 ~l~~~i~~~l~~~-~~~Il~H~FSnGG~~~~ 249 (440)
.+.+.+.+++++. ..+|++=|.|.||+++.
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAt 336 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAI 336 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHH
Confidence 3555565655555 66999999999999764
No 204
>PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B.
Probab=20.77 E-value=4.9e+02 Score=21.51 Aligned_cols=88 Identities=16% Similarity=0.221 Sum_probs=44.8
Q ss_pred CCeEEEEeeecCCc-hhhHHHHHHHHHHC-----CCeEEEEecCCCceeecccchhhhHHHHHHHHHHHHHhhhcCCcEE
Q 040744 164 SRTVVVLLGWLGAK-QKHLRKYAEWYTSK-----GFHVITFTFPMAEILSYQVGGKAEQNIELLVNHLADCLEDEGKNLV 237 (440)
Q Consensus 164 ~~plVVLlGW~GA~-~khl~KYa~iY~~~-----G~nVL~~~~p~~~il~~~~g~k~~k~l~~l~~~i~~~l~~~~~~Il 237 (440)
++.+++++|..|+- -.-+..|.+.+... ..+++.+..+... .. +.+...+.+.+......
T Consensus 3 ~~~~~~i~G~~G~GKT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----~~~~~~i~~~l~~~~~~-- 68 (131)
T PF13401_consen 3 SQRILVISGPPGSGKTTLIKRLARQLNAEAEIKNHPDVIYVNCPSSR--------TP----RDFAQEILEALGLPLKS-- 68 (131)
T ss_dssp ----EEEEE-TTSSHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHS--------SH----HHHHHHHHHHHT-SSSS--
T ss_pred CCcccEEEcCCCCCHHHHHHHHHHHhHHhhhccCCCcEEEEEeCCCC--------CH----HHHHHHHHHHhCccccc--
Confidence 46789999999954 44477778877664 5667765554311 11 23444444444433222
Q ss_pred EEEecccHHHHHHHHHHHHhhcCCCCccCceEEEecCC
Q 040744 238 FHTFSNTGWLTYGAILEKFQNKDPSLMGRIRGCIVDSA 275 (440)
Q Consensus 238 ~H~FSnGG~~~~~~Ll~~l~~~~~~l~~~VkG~I~DSa 275 (440)
-......+..+.+.+.+. ...-+|+|-+
T Consensus 69 ----~~~~~~l~~~~~~~l~~~------~~~~lviDe~ 96 (131)
T PF13401_consen 69 ----RQTSDELRSLLIDALDRR------RVVLLVIDEA 96 (131)
T ss_dssp ----TS-HHHHHHHHHHHHHHC------TEEEEEEETT
T ss_pred ----cCCHHHHHHHHHHHHHhc------CCeEEEEeCh
Confidence 223334455555555543 2267899974
No 205
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=20.58 E-value=2.9e+02 Score=25.79 Aligned_cols=62 Identities=18% Similarity=0.202 Sum_probs=41.8
Q ss_pred EEEEcCCCCccCHHHHHHHHHHHHHc-CCceEEEEeCCCccccccccChHHHHHHHHHHHHHHH
Q 040744 371 LYIYSSADRVIPAESVESFIEEQRKA-GREVRACNFVSTPHVDHFRNDPKLYTTQLSQFLEDYV 433 (440)
Q Consensus 371 LYIYS~aD~lIP~~dVE~~~e~~r~~-G~~V~~~~F~~S~HV~H~R~~PeeY~~aV~~FL~~~~ 433 (440)
++..+..-.-.+.+.+++||+...+. ...-+..++-|| -|+|+.-.+..||+.+.+-++-..
T Consensus 33 ~~~~~h~~~~~~~~~l~~~Y~~~~~i~~~~yDGlIITGA-pve~~~fe~v~Yw~El~~i~dwa~ 95 (175)
T cd03131 33 IRPSSHSSKNTPPEHVNRFYETFDDIRDAKFDGLIVTGA-PVEHLPFEQVDYWEELTEILDWAK 95 (175)
T ss_pred EecCCCCCCCCCHHHHHHhccCHHHccccCCCEEEEeCC-CcccCCccccchHHHHHHHHHHHH
Confidence 34444444446889999999765322 122347777555 599999999999999887665443
No 206
>PTZ00445 p36-lilke protein; Provisional
Probab=20.42 E-value=1.7e+02 Score=28.59 Aligned_cols=64 Identities=17% Similarity=0.310 Sum_probs=38.8
Q ss_pred hhHHHHHHHHHHCCCeEEEEecCCCceeecccchhhhHH---------HH-HHHHHHHHHhhhcCCcEEEEEeccc
Q 040744 179 KHLRKYAEWYTSKGFHVITFTFPMAEILSYQVGGKAEQN---------IE-LLVNHLADCLEDEGKNLVFHTFSNT 244 (440)
Q Consensus 179 khl~KYa~iY~~~G~nVL~~~~p~~~il~~~~g~k~~k~---------l~-~l~~~i~~~l~~~~~~Il~H~FSnG 244 (440)
+-..++.+.+++.|..+|.+++.. +++..-+||..++. +. .+..++ ..+++.+=+|.+=+||--
T Consensus 29 ~~~~~~v~~L~~~GIk~Va~D~Dn-TlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~-~~l~~~~I~v~VVTfSd~ 102 (219)
T PTZ00445 29 ESADKFVDLLNECGIKVIASDFDL-TMITKHSGGYIDPDNDDIRVLTSVTPDFKILG-KRLKNSNIKISVVTFSDK 102 (219)
T ss_pred HHHHHHHHHHHHcCCeEEEecchh-hhhhhhcccccCCCcchhhhhccCCHHHHHHH-HHHHHCCCeEEEEEccch
Confidence 457888999999999999998864 33332333322221 11 122222 223444679999999954
Done!