Query 040748
Match_columns 584
No_of_seqs 308 out of 1786
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 18:28:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040748.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040748hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jur_A EXO-poly-alpha-D-galact 100.0 2.1E-59 7.2E-64 509.1 34.0 338 187-541 25-414 (448)
2 1rmg_A Rgase A, rhamnogalactur 100.0 8.2E-58 2.8E-62 494.0 34.8 362 170-575 2-367 (422)
3 1bhe_A PEHA, polygalacturonase 100.0 1.5E-54 5.1E-59 462.3 38.3 335 187-556 12-375 (376)
4 2uvf_A Exopolygalacturonase; G 100.0 1.8E-52 6.2E-57 470.8 34.2 342 187-542 154-566 (608)
5 1czf_A Polygalacturonase II; b 100.0 6.1E-52 2.1E-56 439.8 33.5 324 188-555 28-358 (362)
6 2iq7_A Endopolygalacturonase; 100.0 2.4E-51 8.2E-56 432.0 32.9 320 204-554 6-332 (339)
7 1nhc_A Polygalacturonase I; be 100.0 1.8E-51 6E-56 432.5 31.8 321 203-555 5-332 (336)
8 1hg8_A Endopolygalacturonase; 100.0 9.2E-51 3.1E-55 429.0 34.2 322 205-555 7-345 (349)
9 1ia5_A Polygalacturonase; glyc 100.0 2.6E-50 8.7E-55 424.1 34.4 318 205-555 11-335 (339)
10 1k5c_A Endopolygalacturonase; 100.0 1.9E-50 6.6E-55 424.2 23.5 311 206-555 8-329 (335)
11 2x6w_A Tail spike protein; vir 100.0 1.1E-43 3.8E-48 390.5 18.0 298 187-541 49-385 (600)
12 1x0c_A Isopullulanase; glycosi 100.0 1E-37 3.5E-42 346.2 18.1 308 188-540 137-521 (549)
13 1h80_A IOTA-carrageenase; hydr 100.0 4.3E-35 1.5E-39 318.7 25.6 298 187-539 19-360 (464)
14 1ogo_X Dextranase; hydrolase, 100.0 5.5E-35 1.9E-39 324.6 25.9 273 219-540 229-546 (574)
15 3gq8_A Preneck appendage prote 100.0 1.2E-34 4.1E-39 320.3 26.2 301 187-542 20-373 (609)
16 3gqn_A Preneck appendage prote 100.0 2E-34 6.9E-39 322.9 25.0 302 187-543 20-374 (772)
17 2pyg_A Poly(beta-D-mannuronate 100.0 2.5E-28 8.7E-33 258.6 25.1 192 189-413 2-216 (377)
18 2vbk_A Tailspike-protein; vira 100.0 3.6E-28 1.2E-32 255.8 16.5 226 187-452 49-292 (514)
19 3jur_A EXO-poly-alpha-D-galact 99.9 1.1E-22 3.8E-27 220.9 24.0 230 270-540 189-444 (448)
20 3eqn_A Glucan 1,3-beta-glucosi 99.9 2.4E-21 8.1E-26 217.6 22.0 263 187-509 47-328 (758)
21 2uvf_A Exopolygalacturonase; G 99.9 4.1E-20 1.4E-24 208.0 26.0 246 270-562 330-606 (608)
22 1czf_A Polygalacturonase II; b 99.8 2.8E-19 9.7E-24 189.4 23.9 203 322-551 89-330 (362)
23 1ia5_A Polygalacturonase; glyc 99.8 7.2E-19 2.5E-23 184.8 26.2 203 322-550 66-306 (339)
24 2iq7_A Endopolygalacturonase; 99.8 1.1E-18 3.7E-23 183.4 25.7 203 322-550 62-304 (339)
25 1nhc_A Polygalacturonase I; be 99.8 2.1E-18 7.1E-23 181.0 25.2 202 322-550 62-303 (336)
26 1rmg_A Rgase A, rhamnogalactur 99.8 1.4E-17 4.6E-22 179.9 28.6 170 345-542 129-312 (422)
27 1hg8_A Endopolygalacturonase; 99.8 1.1E-17 3.9E-22 176.3 25.3 204 322-551 63-317 (349)
28 1bhe_A PEHA, polygalacturonase 99.8 1.6E-17 5.3E-22 176.9 25.8 198 321-541 101-339 (376)
29 1k5c_A Endopolygalacturonase; 99.8 5.1E-18 1.7E-22 178.0 18.9 202 322-552 60-302 (335)
30 1ogo_X Dextranase; hydrolase, 99.7 1.2E-15 4.1E-20 169.7 23.3 238 221-511 264-546 (574)
31 1x0c_A Isopullulanase; glycosi 99.7 4.9E-15 1.7E-19 164.5 23.5 250 220-511 221-521 (549)
32 3eqn_A Glucan 1,3-beta-glucosi 99.5 3.3E-14 1.1E-18 160.0 14.2 122 133-286 366-494 (758)
33 2inu_A Insulin fructotransfera 99.5 2.4E-13 8.1E-18 143.9 19.0 231 187-452 12-283 (410)
34 1h80_A IOTA-carrageenase; hydr 99.5 1.4E-12 4.8E-17 141.9 19.4 158 326-520 106-278 (464)
35 3gq8_A Preneck appendage prote 99.3 1.1E-10 3.9E-15 129.4 24.4 226 269-541 132-401 (609)
36 3gqn_A Preneck appendage prote 99.3 1.5E-10 5E-15 130.6 23.7 243 269-559 132-425 (772)
37 2pyg_A Poly(beta-D-mannuronate 99.3 1.4E-10 4.8E-15 122.4 20.4 193 323-541 151-361 (377)
38 2x6w_A Tail spike protein; vir 99.2 6.8E-10 2.3E-14 122.8 23.2 231 244-536 149-408 (600)
39 1ru4_A Pectate lyase, PEL9A; p 99.0 1.3E-08 4.3E-13 109.1 21.9 242 187-479 14-298 (400)
40 1dbg_A Chondroitinase B; beta 98.7 8.1E-07 2.8E-11 97.6 19.4 277 205-541 30-351 (506)
41 1pxz_A Major pollen allergen J 98.4 3E-06 1E-10 88.9 14.9 128 343-479 105-255 (346)
42 3zsc_A Pectate trisaccharide-l 98.3 3E-05 1E-09 81.1 19.8 120 369-507 115-250 (340)
43 1idk_A Pectin lyase A; signal, 98.3 9.3E-06 3.2E-10 85.6 15.9 132 350-507 131-280 (359)
44 1gq8_A Pectinesterase; hydrola 98.3 3.6E-05 1.2E-09 79.9 19.3 133 327-473 92-243 (319)
45 1pcl_A Pectate lyase E; lyase 98.3 1.6E-05 5.6E-10 83.6 16.8 134 328-472 79-248 (355)
46 3zsc_A Pectate trisaccharide-l 98.2 2.4E-05 8.2E-10 81.8 17.2 132 322-475 84-251 (340)
47 1xg2_A Pectinesterase 1; prote 98.2 3.8E-05 1.3E-09 79.6 18.5 133 327-473 88-239 (317)
48 2qy1_A Pectate lyase II; GAG l 98.2 2.1E-05 7.1E-10 82.1 16.0 164 323-507 66-250 (330)
49 1pxz_A Major pollen allergen J 98.2 2.1E-05 7.3E-10 82.5 15.4 131 322-474 107-272 (346)
50 1air_A Pectate lyase C, PELC; 98.2 1.8E-05 6.3E-10 83.2 14.7 161 323-507 82-261 (353)
51 1vbl_A Pectate lyase 47; PL 47 98.1 1.5E-05 5.1E-10 85.5 13.5 137 325-472 128-303 (416)
52 2qy1_A Pectate lyase II; GAG l 98.1 3.4E-05 1.2E-09 80.5 15.3 140 322-478 87-254 (330)
53 1pcl_A Pectate lyase E; lyase 98.1 0.00012 4.2E-09 77.0 19.4 137 322-473 97-279 (355)
54 1qcx_A Pectin lyase B; beta-he 98.1 1.8E-05 6.1E-10 83.5 12.8 133 350-508 131-281 (359)
55 2o04_A Pectate lyase, PL; hexa 98.1 2.5E-05 8.5E-10 83.4 12.8 136 326-473 124-298 (399)
56 1idk_A Pectin lyase A; signal, 98.0 9E-05 3.1E-09 78.1 15.2 136 322-478 125-284 (359)
57 3vmv_A Pectate lyase; polysacc 98.0 0.00013 4.3E-09 76.0 16.0 133 352-506 103-249 (326)
58 2x3h_A K5 lyase, K5A lyase; ba 98.0 0.00047 1.6E-08 69.9 19.2 169 187-400 62-247 (542)
59 3vmv_A Pectate lyase; polysacc 98.0 7.2E-05 2.5E-09 77.8 13.8 135 322-473 96-249 (326)
60 2inu_A Insulin fructotransfera 98.0 0.00015 5E-09 77.1 16.2 131 329-480 136-282 (410)
61 1qcx_A Pectin lyase B; beta-he 97.9 0.00019 6.6E-09 75.6 16.5 135 323-478 126-284 (359)
62 1pe9_A Pectate lyase A; parall 97.9 6.2E-05 2.1E-09 79.3 12.2 133 328-471 86-258 (361)
63 1ru4_A Pectate lyase, PEL9A; p 97.7 0.00019 6.6E-09 76.7 11.5 108 323-444 110-230 (400)
64 2nsp_A Pectinesterase A; micha 97.6 0.001 3.4E-08 69.7 16.4 106 326-444 93-230 (342)
65 1air_A Pectate lyase C, PELC; 97.6 0.00027 9.2E-09 74.3 11.9 140 322-478 104-265 (353)
66 1vbl_A Pectate lyase 47; PL 47 97.5 0.0005 1.7E-08 73.7 11.5 135 322-473 149-333 (416)
67 1pe9_A Pectate lyase A; parall 97.4 0.00053 1.8E-08 72.3 10.6 135 322-473 104-290 (361)
68 3uw0_A Pectinesterase; right-h 97.3 0.0022 7.6E-08 67.6 13.9 80 325-412 118-218 (364)
69 2o04_A Pectate lyase, PL; hexa 97.3 0.001 3.5E-08 71.0 10.7 134 322-473 144-328 (399)
70 2vbk_A Tailspike-protein; vira 96.8 0.0036 1.2E-07 66.9 9.3 79 322-418 197-289 (514)
71 3grh_A YBHC, acyl-COA thioeste 96.4 0.052 1.8E-06 58.0 15.4 46 205-253 88-136 (422)
72 3t9g_A Pectate lyase; PL3, par 96.0 0.13 4.5E-06 49.0 14.3 129 353-509 53-184 (196)
73 1xg2_A Pectinesterase 1; prote 95.2 0.23 7.7E-06 51.3 13.9 111 350-473 88-205 (317)
74 1dbg_A Chondroitinase B; beta 95.2 0.1 3.6E-06 57.1 11.7 139 327-474 226-392 (506)
75 1gq8_A Pectinesterase; hydrola 94.5 0.26 8.7E-06 50.9 12.1 110 350-473 92-209 (319)
76 3t9g_A Pectate lyase; PL3, par 94.5 0.62 2.1E-05 44.4 13.4 136 325-475 48-183 (196)
77 1ee6_A Pectate lyase; parallel 93.4 1.1 3.7E-05 42.9 12.9 127 353-507 49-178 (197)
78 1ee6_A Pectate lyase; parallel 93.2 0.63 2.1E-05 44.4 10.9 135 325-474 44-178 (197)
79 2nsp_A Pectinesterase A; micha 92.9 0.77 2.6E-05 47.8 12.4 112 350-473 94-230 (342)
80 3uw0_A Pectinesterase; right-h 91.5 1.6 5.4E-05 45.8 12.7 112 350-472 120-254 (364)
81 3b4n_A Endo-pectate lyase; pec 91.4 3.1 0.00011 42.8 14.2 50 354-411 160-211 (344)
82 3ju4_A Endo-N-acetylneuraminid 89.9 0.11 3.6E-06 55.1 1.8 40 195-237 4-43 (670)
83 3b4n_A Endo-pectate lyase; pec 87.1 3.1 0.00011 42.9 10.4 141 282-443 125-275 (344)
84 2vfm_A Bifunctional tail prote 75.1 77 0.0026 32.9 15.4 67 401-469 269-352 (559)
85 2v5i_A Salmonella typhimurium 71.9 86 0.0029 32.6 14.8 36 432-469 320-355 (559)
86 2xc1_A Bifunctional tail prote 66.0 1E+02 0.0035 33.3 14.3 35 433-469 425-459 (666)
87 3kl4_B DPAP B, YSCV, signal pe 63.7 2.1 7.2E-05 29.5 0.8 28 6-39 15-42 (42)
88 2xc1_A Bifunctional tail prote 57.8 1.1E+02 0.0038 33.0 12.8 82 378-469 376-481 (666)
89 3riq_A Tailspike protein; righ 43.1 1.6E+02 0.0053 31.3 11.0 80 378-467 262-363 (543)
90 3grh_A YBHC, acyl-COA thioeste 36.5 4E+02 0.014 28.2 13.3 80 324-412 196-296 (422)
91 3riq_A Tailspike protein; righ 35.6 1.4E+02 0.0047 31.7 9.2 67 401-469 262-343 (543)
92 4ec6_A Putative uncharacterize 35.4 7.9 0.00027 35.7 0.0 13 32-44 2-14 (161)
93 2vfm_A Bifunctional tail prote 33.4 1.3E+02 0.0043 31.4 8.4 82 378-469 269-374 (559)
94 2v5i_A Salmonella typhimurium 32.5 1.2E+02 0.0043 31.4 8.2 124 378-511 272-427 (559)
95 2x3h_A K5 lyase, K5A lyase; ba 25.0 3.6E+02 0.012 27.5 9.9 116 429-563 139-266 (542)
96 2yuh_A Tubulin-specific chaper 20.9 1.4E+02 0.0047 27.7 5.8 12 323-334 71-82 (179)
No 1
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=100.00 E-value=2.1e-59 Score=509.12 Aligned_cols=338 Identities=25% Similarity=0.352 Sum_probs=295.1
Q ss_pred CceEEEecccccCCCCcchHHHHHHHHHHHhhcCCcEEEEcCCeEEEeeeeeeecccCCceEEeeeeeecCCCCCCcc-c
Q 040748 187 GNVIDVRKFGAVGDGISDDTEAFKMTWDSACQKDFAVIHVPYGFSFMIQSTIFTGPCQGSIVFQVDGTIMPPDGPESW-L 265 (584)
Q Consensus 187 ~~~~~v~~~GA~gdg~tDdT~Aiq~Ai~~a~~~~g~~v~~p~G~tY~i~~~~ltgp~ksnvtL~l~GtL~~s~~~~~~-~ 265 (584)
+.+++|++|||+|||.+|||+|||+||++|++.+|++|+||+| +|+++++.| +++++|+++|+|+++.+..+| +
T Consensus 25 ~~~~~v~~~GA~gdg~tddt~Aiq~Ai~~c~~~ggg~v~vP~G-~yl~~~l~l----~s~v~l~l~gtL~~s~d~~~y~p 99 (448)
T 3jur_A 25 DREVNLLDFGARGDGRTDCSESFKRAIEELSKQGGGRLIVPEG-VFLTGPIHL----KSNIELHVKGTIKFIPDPERYLP 99 (448)
T ss_dssp SCEEEGGGGTCCCEEEEECHHHHHHHHHHHHHHTCEEEEECSS-EEEESCEEC----CTTEEEEESSEEEECCCGGGGCS
T ss_pred CcEEEEEecccCCCCCeecHHHHHHHHHhhhhcCCeEEEECCC-cEEEeeeEe----CCCcEEEEEEEEEecCCHHHhCc
Confidence 5799999999999999999999999999766557899999999 899998887 899999999999999999888 3
Q ss_pred ccC---------CcceeEEEeeeeceEEecCeEEeCCC--CccccCCCCCCCC-----CC------------------CC
Q 040748 266 QKN---------SKRQWLVFYKINELSLQGGGTIDGRG--HKWWDLPCKPHKG-----IN------------------GT 311 (584)
Q Consensus 266 ~~~---------~~~~lI~~~~~~NVtI~G~G~IDGnG--~~ww~~~~~~~~g-----~~------------------g~ 311 (584)
... ...+||++.+++||+|+|.|+|||+| +.||........+ .. ..
T Consensus 100 ~~~~~~~G~~~~~~~~lI~~~~~~ni~ItG~GtIDG~G~~~~ww~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~ 179 (448)
T 3jur_A 100 VVLTRFEGIELYNYSPLVYALDCENVAITGSGVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEE 179 (448)
T ss_dssp CEEEEETTEEEEESCCSEEEESCEEEEEESSCEEECCCBTTBBGGGGCCGGGTCCTTSCCSHHHHHHHHHHHHHTCCGGG
T ss_pred ccccccccccccCccceEEEeCcEeeEEEEeEEEECCCCchhhhhhcccccccccccccccccchhhhhhhhcccCcchh
Confidence 211 13568999999999999999999999 8899753210000 00 00
Q ss_pred CC--CCCCCCCeeEEEEeecCceEeeeeEecCCCceeeeeccccEEEEeEEEECCCCCCCCCceeecCcccEEEEceEEe
Q 040748 312 TS--PGPCDSPIALRFFMSSNLTVQRLRIKDSPQFHFRFDNCKNVHIESIHITAPALSPNTDGIHIENTNGVEIYNSVIS 389 (584)
Q Consensus 312 ~~--~g~~~rP~~I~f~~s~nvtI~gvti~ns~~~~I~i~~s~nV~I~nv~I~~~~~~~ntDGI~i~~S~nV~I~n~~i~ 389 (584)
++ .+...||++|.|.+|+|++|+|++++|++.|++++..|+||+|+|++|.++ ++|+||||+.+|++|+|+||+|.
T Consensus 180 ~~~~~~~~~RP~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~--~~NtDGidi~~s~nV~I~n~~i~ 257 (448)
T 3jur_A 180 RVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLIEKCRFD 257 (448)
T ss_dssp CBCSTTCCCCCCSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEEC--STTCCSBCCBSCEEEEEESCEEE
T ss_pred hhccccccCCceEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeec--cCCCccccccCCcCEEEEeeEEE
Confidence 00 123479999999999999999999999999999999999999999999996 57999999999999999999999
Q ss_pred cCCCcEEeCCC-----------ceeEEEEeccc--CCCC-cceeeccCCCCCCCcEEeEEEEeeEEecCCceEEEEeecC
Q 040748 390 NGDDCVSIGSG-----------CYDVDIRNITC--GPGH-GISIGSLGNHNSRACVSNITVRDSVIKVSNNGVRIKTWQG 455 (584)
Q Consensus 390 ~gDDgIai~sg-----------s~NV~I~Nc~~--~~g~-GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~~GI~Iks~~g 455 (584)
++||||+++++ ++||+|+||+| ..+| ||+|||++ .+.++||+|+||+|.++.+|++||++.+
T Consensus 258 ~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~----~~~v~nV~v~n~~~~~t~~GirIKt~~g 333 (448)
T 3jur_A 258 TGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEM----SGGVRNVVARNNVYMNVERALRLKTNSR 333 (448)
T ss_dssp ESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSC----TTCEEEEEEESCEEESCSEEEEEECCTT
T ss_pred eCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcc----cCcEEEEEEEEEEEecccceEEEEEEcC
Confidence 99999999987 89999999999 6676 79999986 4689999999999999999999999998
Q ss_pred CCCeEEeEEEEceEEcCCcccE-EEEEeecCCCCCCCCCCCeeEEeEEEEeEEEeecCCCCCeEEecCCCCceecEEEEe
Q 040748 456 GSGAVSGITFSNIHMNNVRNPI-IIDQYYCLTKDCTNKTSAVYVSDILYSNIKGTYDIRSPPMHFACSDTVPCTNLTLSE 534 (584)
Q Consensus 456 ~~G~V~NItf~NI~i~~v~~~I-~I~~~y~~~~~~~~~~~~~~I~nItf~NI~gt~~~~~~~i~i~~~~~~~~~nItf~N 534 (584)
++|.|+||+|+||+|+++.+++ .|+++|+.. + ....+.|+||+|+||+++.. . .++.+.|.+..+|+||+|+|
T Consensus 334 ~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~--~--~~~~~~i~nI~~~NI~~t~~-~-~~i~i~g~~~~p~~~I~~~n 407 (448)
T 3jur_A 334 RGGYMENIFFIDNVAVNVSEEVIRINLRYDNE--E--GEYLPVVRSVFVKNLKATGG-K-YAVRIEGLENDYVKDILISD 407 (448)
T ss_dssp TCSEEEEEEEESCEEEEESSEEEEEESCGGGC--C--CSCCCEEEEEEEESCEEEEC-S-EEEEEECBTTBCEEEEEEEE
T ss_pred CCceEeeEEEEEEEEECCccccEEEEeeccCC--C--CCCCceEEEEEEEeEEEEec-c-eEEEEEeCCCCCEeeEEEEE
Confidence 8899999999999999999988 999998754 2 23467999999999999873 2 57889999999999999999
Q ss_pred EEEEcCC
Q 040748 535 VELLPAK 541 (584)
Q Consensus 535 I~i~~~~ 541 (584)
|+|++.+
T Consensus 408 v~i~~~~ 414 (448)
T 3jur_A 408 TIIEGAK 414 (448)
T ss_dssp EEEESCS
T ss_pred EEEEccc
Confidence 9999765
No 2
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=100.00 E-value=8.2e-58 Score=493.96 Aligned_cols=362 Identities=25% Similarity=0.435 Sum_probs=308.2
Q ss_pred CCCCCCCCCCCCCCCCCCceEEEecccccCCCCcchHHHHHHHHHHHhhcCCcEEEEcCCeEEEeee-eeeecccCCceE
Q 040748 170 YNSPGAPTTSPANSPDDGNVIDVRKFGAVGDGISDDTEAFKMTWDSACQKDFAVIHVPYGFSFMIQS-TIFTGPCQGSIV 248 (584)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~v~~~GA~gdg~tDdT~Aiq~Ai~~a~~~~g~~v~~p~G~tY~i~~-~~ltgp~ksnvt 248 (584)
|.+++++.+++++... ..+++|++|||+|||.+|||+|||+||++ |+ ++++|+||+| +|+++. +.|.+ .++++
T Consensus 2 ~~~~~~~~t~~~~~~~-~~~~~V~~~GA~~dg~tddT~Aiq~Ai~a-c~-~g~~V~vP~G-~Yli~~~l~l~g--~s~v~ 75 (422)
T 1rmg_A 2 LSGSVGPLTSASTKGA-TKTCNILSYGAVADNSTDVGPAITSAWAA-CK-SGGLVYIPSG-NYALNTWVTLTG--GSATA 75 (422)
T ss_dssp CSSCCSCSSCHHHHHH-HCEEEGGGGTCCCSSSSBCHHHHHHHHHH-HT-BTCEEEECSS-EEEECSCEEEES--CEEEE
T ss_pred cccccCCCCchhhccC-CcEEEeeeccccCCCCcccHHHHHHHHHH-CC-CCCEEEECCC-eEEeCCceeecC--CCeEE
Confidence 4566677776444322 56899999999999999999999999995 54 4789999999 799987 88866 47899
Q ss_pred EeeeeeecCCCCC-CcccccCCcceeEEEeeeeceEEecCeEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCeeEEEEe
Q 040748 249 FQVDGTIMPPDGP-ESWLQKNSKRQWLVFYKINELSLQGGGTIDGRGHKWWDLPCKPHKGINGTTSPGPCDSPIALRFFM 327 (584)
Q Consensus 249 L~l~GtL~~s~~~-~~~~~~~~~~~lI~~~~~~NVtI~G~G~IDGnG~~ww~~~~~~~~g~~g~~~~g~~~rP~~I~f~~ 327 (584)
|+++|+|++..+. ..| ..++...+.++++|+|.|+|||+|..||.. +. .||++|+|.+
T Consensus 76 l~l~G~~l~~~~~~~~~------~~~~~~~~~~~i~i~G~G~IdG~G~~~w~~---------~~------~rp~~i~~~~ 134 (422)
T 1rmg_A 76 IQLDGIIYRTGTASGNM------IAVTDTTDFELFSSTSKGAVQGFGYVYHAE---------GT------YGARILRLTD 134 (422)
T ss_dssp EEECSEEEECCCCSSEE------EEEEEEEEEEEECSSSCCEEECCTHHHHTT---------TC------CCCEEEEEEE
T ss_pred EEEcCcEEcccCCCCce------EEEEecCceeEEeeccCEEEECCcchhhcC---------CC------CCceEEEEcc
Confidence 9999987654331 122 123445667777889999999999999952 11 4899999999
Q ss_pred ecCceEeeeeEecCCCceeeeeccccEEEEeEEEECCCCCCCCCceeecCcccEEEEceEEecCCCcEEeCCCceeEEEE
Q 040748 328 SSNLTVQRLRIKDSPQFHFRFDNCKNVHIESIHITAPALSPNTDGIHIENTNGVEIYNSVISNGDDCVSIGSGCYDVDIR 407 (584)
Q Consensus 328 s~nvtI~gvti~ns~~~~I~i~~s~nV~I~nv~I~~~~~~~ntDGI~i~~S~nV~I~n~~i~~gDDgIai~sgs~NV~I~ 407 (584)
|+|++|+|++++|++.|+|++..|+||+|+|++|.+ .+.+++|||++.+ +||+|+||+|.++||||+++++++||+|+
T Consensus 135 ~~nv~I~~iti~nsp~~~i~i~~~~nv~I~n~~I~~-~d~~ntDGidi~~-~nV~I~n~~i~~gDD~Iai~s~~~nI~I~ 212 (422)
T 1rmg_A 135 VTHFSVHDIILVDAPAFHFTMDTCSDGEVYNMAIRG-GNEGGLDGIDVWG-SNIWVHDVEVTNKDECVTVKSPANNILVE 212 (422)
T ss_dssp EEEEEEEEEEEECCSSCSEEEEEEEEEEEEEEEEEC-CSSTTCCSEEEEE-EEEEEEEEEEESSSEEEEEEEEEEEEEEE
T ss_pred cceEEEECeEEECCCceEEEEeCcCCEEEEeEEEEC-CCCCCCccEeecC-CeEEEEeeEEeCCCCeEEeCCCCcCEEEE
Confidence 999999999999999999999999999999999999 4457999999999 99999999999999999999999999999
Q ss_pred ecccCCCCcceeeccCCCCCCCcEEeEEEEeeEEecCCceEEEEeecCCCCeEEeEEEEceEEcCCcccEEEEEeecCCC
Q 040748 408 NITCGPGHGISIGSLGNHNSRACVSNITVRDSVIKVSNNGVRIKTWQGGSGAVSGITFSNIHMNNVRNPIIIDQYYCLTK 487 (584)
Q Consensus 408 Nc~~~~g~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~~GI~Iks~~g~~G~V~NItf~NI~i~~v~~~I~I~~~y~~~~ 487 (584)
||+|..+|||+|||++. .+.++||+|+||+|.++.+|++||++.+ .|.++||+|+||+|+++.++|.|+++|+..
T Consensus 213 n~~~~~~~GisIGS~g~---~~~v~nV~v~n~~~~~~~~Gi~Ikt~~g-~G~v~nI~~~NI~~~~v~~~i~i~~~y~~~- 287 (422)
T 1rmg_A 213 SIYCNWSGGCAMGSLGA---DTDVTDIVYRNVYTWSSNQMYMIKSNGG-SGTVSNVLLENFIGHGNAYSLDIDGYWSSM- 287 (422)
T ss_dssp EEEEESSSEEEEEEECT---TEEEEEEEEEEEEEESSSCSEEEEEBBC-CEEEEEEEEEEEEEEEESCSEEEETBCTTS-
T ss_pred eEEEcCCcceeecccCC---CCcEEEEEEEeEEEeccceEEEEEecCC-CcEEEEEEEEeEEEECccccEEEEeeccCC-
Confidence 99999999999999874 3589999999999999999999999654 579999999999999999999999998753
Q ss_pred CCCCCCCCeeEEeEEEEeEEEeecC--CCCCeEEecCCCCceecEEEEeEEEEcCCCCccccceeecceecCCccccCCc
Q 040748 488 DCTNKTSAVYVSDILYSNIKGTYDI--RSPPMHFACSDTVPCTNLTLSEVELLPAKGDLVSDPFCWNAYGDLPTLTIPPV 565 (584)
Q Consensus 488 ~~~~~~~~~~I~nItf~NI~gt~~~--~~~~i~i~~~~~~~~~nItf~NI~i~~~~g~~~~~~~c~nv~G~~~~~t~~~~ 565 (584)
+........|+||+|+||+++... ...++.|.|.+..+|+||+|+||+|+...|.. ....|+|++|..
T Consensus 288 -~~~~~~~~~i~nI~~~nI~gt~~~g~~~~~i~i~~~~~~~~~ni~l~nv~i~~~~g~~-~~~~C~n~~g~g-------- 357 (422)
T 1rmg_A 288 -TAVAGDGVQLNNITVKNWKGTEANGATRPPIRVVCSDTAPCTDLTLEDIAIWTESGSS-ELYLCRSAYGSG-------- 357 (422)
T ss_dssp -CCBSSSCCEEEEEEEEEEEEEESCTTTSCSEEEECBTTBCEEEEEEEEEEEEESSSSC-EEEEEESEEEES--------
T ss_pred -CcccCCCceEEEEEEEeEEEEecccccceeEEEEeCCCCcEeeEEEEeEEEEcCCCCc-cceEEECCCccc--------
Confidence 223456789999999999998752 12478999999999999999999999888754 357999999975
Q ss_pred cccCcCCCCC
Q 040748 566 SCLLEGIPRS 575 (584)
Q Consensus 566 ~~~~~~~~~~ 575 (584)
.||.++.|..
T Consensus 358 ~C~~~~~~~~ 367 (422)
T 1rmg_A 358 YCLKDSSSHT 367 (422)
T ss_dssp TTCBCCSSCC
T ss_pred cccCCCCCcc
Confidence 8999998753
No 3
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=100.00 E-value=1.5e-54 Score=462.28 Aligned_cols=335 Identities=24% Similarity=0.376 Sum_probs=289.2
Q ss_pred CceEEEecccccCCCCcchHHHHHHHHHHHhhcCCcEEEEcC---CeEEEeeeeeeecccCCceEEeeee--eecCCCCC
Q 040748 187 GNVIDVRKFGAVGDGISDDTEAFKMTWDSACQKDFAVIHVPY---GFSFMIQSTIFTGPCQGSIVFQVDG--TIMPPDGP 261 (584)
Q Consensus 187 ~~~~~v~~~GA~gdg~tDdT~Aiq~Ai~~a~~~~g~~v~~p~---G~tY~i~~~~ltgp~ksnvtL~l~G--tL~~s~~~ 261 (584)
+..++|++|| .+|||+|||+||++ |+. |++|+||+ | +|+++++.| +++++|++++ +|+++.+.
T Consensus 12 p~~~~v~~~G-----~~~dT~aiq~Ai~a-c~~-Gg~v~~~~~~~g-~yl~g~i~l----~s~vtL~l~~Ga~L~~s~~~ 79 (376)
T 1bhe_A 12 PSSCTTLKAD-----SSTATSTIQKALNN-CDQ-GKAVRLSAGSTS-VFLSGPLSL----PSGVSLLIDKGVTLRAVNNA 79 (376)
T ss_dssp CCEEEEEECC-----SSBCHHHHHHHHTT-CCT-TCEEEEECSSSS-EEEESCEEC----CTTCEEEECTTCEEEECSCS
T ss_pred CCeEEECCCC-----CCccHHHHHHHHHH-hcc-CCcEEEECCCCc-eEEEeEEEE----CCCCEEEECCCeEEEeCCCH
Confidence 3469999986 58999999999994 554 55666654 7 899999988 8999999984 89999998
Q ss_pred CcccccC-----------CcceeEEEeeeeceEEecCeEEeCCC--------CccccCCCCCCCCCCCCCCCCCCCCCee
Q 040748 262 ESWLQKN-----------SKRQWLVFYKINELSLQGGGTIDGRG--------HKWWDLPCKPHKGINGTTSPGPCDSPIA 322 (584)
Q Consensus 262 ~~~~~~~-----------~~~~lI~~~~~~NVtI~G~G~IDGnG--------~~ww~~~~~~~~g~~g~~~~g~~~rP~~ 322 (584)
..|+... ...+||.+.+++||+|+|.|+|||+| +.||......+. .+. ...||++
T Consensus 80 ~~y~~~~~~~g~~~~~g~~~~~~I~~~~~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~--~~~----~~~rp~~ 153 (376)
T 1bhe_A 80 KSFENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKV--KKL----KQNTPRL 153 (376)
T ss_dssp GGGBSSTTCSSCEESCSCCBCCSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHH--HTC----EECCCCS
T ss_pred HHCcCCCccccccccCCCCcccEEEEECCEeEEEEeCEEEECCCCcccCCCccccccccccccc--cCc----cCCCCeE
Confidence 8887532 13579999999999999999999999 468863110000 000 0158999
Q ss_pred EEEEeecCceEeeeeEecCCCceeeeeccccEEEEeEEEECCCCCCCCCceeecCcccEEEEceEEecCCCcEEeCC---
Q 040748 323 LRFFMSSNLTVQRLRIKDSPQFHFRFDNCKNVHIESIHITAPALSPNTDGIHIENTNGVEIYNSVISNGDDCVSIGS--- 399 (584)
Q Consensus 323 I~f~~s~nvtI~gvti~ns~~~~I~i~~s~nV~I~nv~I~~~~~~~ntDGI~i~~S~nV~I~n~~i~~gDDgIai~s--- 399 (584)
|.|.+|+|++|+|++++|++.|++++..|++++|+|++|.++..++|+||||+++|++|+|+||+|.++||||++++
T Consensus 154 i~~~~~~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks~~~ 233 (376)
T 1bhe_A 154 IQINKSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKAYKG 233 (376)
T ss_dssp EEEESCEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSEEEEECTT
T ss_pred EEEEcceEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCCCeEEEcccCC
Confidence 99999999999999999999999999999999999999999887899999999999999999999999999999995
Q ss_pred --CceeEEEEecccCCCCcceeeccCCCCCCCcEEeEEEEeeEEecCCceEEEEeecCCCCeEEeEEEEceEEcCCcccE
Q 040748 400 --GCYDVDIRNITCGPGHGISIGSLGNHNSRACVSNITVRDSVIKVSNNGVRIKTWQGGSGAVSGITFSNIHMNNVRNPI 477 (584)
Q Consensus 400 --gs~NV~I~Nc~~~~g~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~~GI~Iks~~g~~G~V~NItf~NI~i~~v~~~I 477 (584)
+++||+|+||+|.++|||+|||++. .++||+|+||+|.++.+|++||+|.++.|.|+||+|+||+|+++.+||
T Consensus 234 ~~~s~nI~I~n~~~~~ghGisiGSe~~-----~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~ni~f~ni~~~~v~~~i 308 (376)
T 1bhe_A 234 RAETRNISILHNDFGTGHGMSIGSETM-----GVYNVTVDDLKMNGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPI 308 (376)
T ss_dssp SCCEEEEEEEEEEECSSSCEEEEEEES-----SEEEEEEEEEEEESCSEEEEEECCTTTCCEEEEEEEEEEEEESCSEEE
T ss_pred CCCceEEEEEeeEEEccccEEeccCCc-----cEeeEEEEeeEEeCCCcEEEEEEecCCCceEeeEEEEeEEEeCCCceE
Confidence 6999999999999999999999862 799999999999999999999999999999999999999999999999
Q ss_pred EEEEeecCCCCCCCCCCCeeEEeEEEEeEEEeecCCCCCeEEecCCCCceecEEEEeEEEEcCCCCccccceeecceec
Q 040748 478 IIDQYYCLTKDCTNKTSAVYVSDILYSNIKGTYDIRSPPMHFACSDTVPCTNLTLSEVELLPAKGDLVSDPFCWNAYGD 556 (584)
Q Consensus 478 ~I~~~y~~~~~~~~~~~~~~I~nItf~NI~gt~~~~~~~i~i~~~~~~~~~nItf~NI~i~~~~g~~~~~~~c~nv~G~ 556 (584)
.|++.|+... ....+.|+||+|+||+++... ++.|.|.+..+|+||+|+||+|+... .+.|.|+...
T Consensus 309 ~i~~~y~~~~----~~~~~~i~ni~~~ni~gt~~~---~~~l~g~~~~~~~~I~l~nv~l~~~~-----~~~~~~~~~~ 375 (376)
T 1bhe_A 309 VIDTVYEKKE----GSNVPDWSDITFKDVTSETKG---VVVLNGENAKKPIEVTMKNVKLTSDS-----TWQIKNVNVK 375 (376)
T ss_dssp EEETTSSCCC----CCCCCEEEEEEEEEEEECSCC---EEEEECTTCSSCEEEEEEEEECCTTC-----EEEEESEEEE
T ss_pred EEEeeccCCC----CCcCcEEEEEEEEEEEEEecc---eEEEEeCCCCCeeeEEEEeEEEecCC-----CceEEEEEec
Confidence 9999987532 334578999999999998652 58899999999999999999999863 3789998753
No 4
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=100.00 E-value=1.8e-52 Score=470.82 Aligned_cols=342 Identities=18% Similarity=0.308 Sum_probs=277.9
Q ss_pred CceEEEecccccCCCCcchHHHHHHHHHHHhhcCCcEEEEcCCeEEEeeeeeeecccCCceEEeee--eeecCCCCCCcc
Q 040748 187 GNVIDVRKFGAVGDGISDDTEAFKMTWDSACQKDFAVIHVPYGFSFMIQSTIFTGPCQGSIVFQVD--GTIMPPDGPESW 264 (584)
Q Consensus 187 ~~~~~v~~~GA~gdg~tDdT~Aiq~Ai~~a~~~~g~~v~~p~G~tY~i~~~~ltgp~ksnvtL~l~--GtL~~s~~~~~~ 264 (584)
..+++|++|||+|||.+|||+|||+||++ |+. |++|+||+| +|+++.+.| +++++|+++ |+|+++.+..+|
T Consensus 154 ~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~~-c~~-g~~v~vP~G-~y~~g~i~l----ks~v~L~l~~gatL~~s~d~~~y 226 (608)
T 2uvf_A 154 PQIVNVRDFGAIDDGKTLNTKAIQQAIDS-CKP-GCRVEIPAG-TYKSGALWL----KSDMTLNLQAGAILLGSENPDDY 226 (608)
T ss_dssp CCEEEGGGGTCCSSSSCCCHHHHHHHHHT-CCT-TEEEEECSE-EEEECCEEC----CSSEEEEECTTEEEEECSCGGGS
T ss_pred CCEEecccccccCCCCccCHHHHHHHHHh-cCC-CCEEEECCC-ceEecceec----cCceEEEecCCcEEEecCCHHHC
Confidence 57999999999999999999999999985 543 789999999 899999988 899999994 789999888888
Q ss_pred cccC---------CcceeEEEee--------eeceEEecCeEEeCCCCccccCCCCCCCCCCCCCCC-------------
Q 040748 265 LQKN---------SKRQWLVFYK--------INELSLQGGGTIDGRGHKWWDLPCKPHKGINGTTSP------------- 314 (584)
Q Consensus 265 ~~~~---------~~~~lI~~~~--------~~NVtI~G~G~IDGnG~~ww~~~~~~~~g~~g~~~~------------- 314 (584)
+... ...++|.+.+ ++||+|+|.|+|||+|..||..... ....|..++
T Consensus 227 ~~~~~~~~~~~~~~~~~lI~~~~~~~~~~g~~~ni~I~G~GtIDG~G~~~~~~~~~--~~~~g~~~p~~~~~~~~~~~~~ 304 (608)
T 2uvf_A 227 PAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDGNGWLRAKTAEI--TDELGRSLPQYVASKNSKVHED 304 (608)
T ss_dssp CEEECSSTTCCSCEECCSEEECCSSCCCTTSEEEEEEESSCEEECCCBCEEEEEEE--ECTTSCEEEEECCCCTTTHHHH
T ss_pred cCcceeeeccccccccceEEeeccccccccceeeEEEEeeEEEcCccccccccccc--cccccccccccccccccccccc
Confidence 6321 1135788776 7999999999999999888742100 000000000
Q ss_pred --------------C-------CCCCCeeEEEEeecCceEeeeeEecCCCceeeeeccccEEEEeEEEECCCCCCCCCce
Q 040748 315 --------------G-------PCDSPIALRFFMSSNLTVQRLRIKDSPQFHFRFDNCKNVHIESIHITAPALSPNTDGI 373 (584)
Q Consensus 315 --------------g-------~~~rP~~I~f~~s~nvtI~gvti~ns~~~~I~i~~s~nV~I~nv~I~~~~~~~ntDGI 373 (584)
| ...||++|.|.+|+|++|+|++|+|++.|++++..|+||+|+|++|.. ..++|+|||
T Consensus 305 ~~~~~~~~~~~~~~g~~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~-~~~~NtDGi 383 (608)
T 2uvf_A 305 GILAKNQVEKAVSDGMDLKNAYGQRRSSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQT-YDANNGDGI 383 (608)
T ss_dssp BSHHHHHHHHHHHTTCCHHHHHHHSSCCSEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEEC-TTCTTCCSE
T ss_pred ccccccccccccccccccccccccCCCeEEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcC-CCCCCCCeE
Confidence 0 013899999999999999999999999999999999999999999875 346899999
Q ss_pred eecCcccEEEEceEEecCCCcEEeCCC----------ceeEEEEecccCCCCcc-eeeccCCCCCCCcEEeEEEEeeEEe
Q 040748 374 HIENTNGVEIYNSVISNGDDCVSIGSG----------CYDVDIRNITCGPGHGI-SIGSLGNHNSRACVSNITVRDSVIK 442 (584)
Q Consensus 374 ~i~~S~nV~I~n~~i~~gDDgIai~sg----------s~NV~I~Nc~~~~g~GI-~IGS~g~~~~~~~v~nI~I~Nit~~ 442 (584)
++.+|++|+|+||+|.+|||||+++++ ++||+|+||+|.++||+ .|||+. .+.++||+|+||+|.
T Consensus 384 di~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~~----~~~v~nI~v~n~~~~ 459 (608)
T 2uvf_A 384 EFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHT----GAWIEDILAENNVMY 459 (608)
T ss_dssp EEESCEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESCC----TTCEEEEEEESCEEE
T ss_pred EecCCceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEcccC----CCCEEEEEEEeEEEE
Confidence 999999999999999999999999875 79999999999999985 589964 578999999999999
Q ss_pred cCCceEEEEeecCCCCeEEeEEEEceEEcCC-cccEEEEEeecCCCCCC---CCCCCeeEEeEEEEeEEEeecCC-CCCe
Q 040748 443 VSNNGVRIKTWQGGSGAVSGITFSNIHMNNV-RNPIIIDQYYCLTKDCT---NKTSAVYVSDILYSNIKGTYDIR-SPPM 517 (584)
Q Consensus 443 ~s~~GI~Iks~~g~~G~V~NItf~NI~i~~v-~~~I~I~~~y~~~~~~~---~~~~~~~I~nItf~NI~gt~~~~-~~~i 517 (584)
++.+|++||++.+++|.|+||+|+||+|+++ +++|.|++.|+....+. .....+.+++|+|+||+...... ...+
T Consensus 460 ~t~~GirIKt~~g~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~~i 539 (608)
T 2uvf_A 460 LTDIGLRAKSTSTIGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNPSI 539 (608)
T ss_dssp SCSEEEEEEEETTTCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSCSE
T ss_pred CCCceEEEeeecCCCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEEeE
Confidence 9999999999999889999999999999999 59999999998643211 01123456677777776554321 0234
Q ss_pred EE--ecCCCCceecEEEEeEEEEcCCC
Q 040748 518 HF--ACSDTVPCTNLTLSEVELLPAKG 542 (584)
Q Consensus 518 ~i--~~~~~~~~~nItf~NI~i~~~~g 542 (584)
.+ .|.+..+|+||+|+||++++.++
T Consensus 540 ~i~g~~~~~~p~~ni~~~nv~i~~~~~ 566 (608)
T 2uvf_A 540 EIKGDTANKAWHRLVHVNNVQLNNVTP 566 (608)
T ss_dssp EEECBGGGTBCEEEEEEEEEEEESCCC
T ss_pred EEEEEcCCCCccccEEEEeEEEEccCc
Confidence 44 45566789999999999998764
No 5
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=6.1e-52 Score=439.83 Aligned_cols=324 Identities=27% Similarity=0.426 Sum_probs=275.9
Q ss_pred ceEEEecccccCCCCcchHHHHHHHHHHHhhcCCcEEEEcCCeEEEeeeeeeecccCCceEEeeeeeecCCCCCCccccc
Q 040748 188 NVIDVRKFGAVGDGISDDTEAFKMTWDSACQKDFAVIHVPYGFSFMIQSTIFTGPCQGSIVFQVDGTIMPPDGPESWLQK 267 (584)
Q Consensus 188 ~~~~v~~~GA~gdg~tDdT~Aiq~Ai~~a~~~~g~~v~~p~G~tY~i~~~~ltgp~ksnvtL~l~GtL~~s~~~~~~~~~ 267 (584)
..+.|++ ++|||+|++++...++++|+||+|+ |+. + + .++++++|+++|++++. ...|..
T Consensus 28 ~~Ctv~~-----------~~aiq~ai~~c~~~~g~~v~vP~G~-~l~--l--~-~l~~~~~l~~~g~~~~~--~~~w~g- 87 (362)
T 1czf_A 28 DSCTFTT-----------AAAAKAGKAKCSTITLNNIEVPAGT-TLD--L--T-GLTSGTKVIFEGTTTFQ--YEEWAG- 87 (362)
T ss_dssp CEEEESS-----------HHHHHHHGGGCSEEEEESCEECTTC-CEE--E--C-SCCTTCEEEEESEEEEC--CCCSCC-
T ss_pred CEEEECC-----------HHHHHHHHHHhhccCCCEEEECCCE-EEE--e--e-ccCCCeEEEEeCcEEec--cccCCC-
Confidence 5677766 7899999997654457899999994 642 1 1 12789999999988753 345643
Q ss_pred CCcceeEEEeeeeceEEec--CeEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCeeEEEEeecCceEeeeeEecCCCce
Q 040748 268 NSKRQWLVFYKINELSLQG--GGTIDGRGHKWWDLPCKPHKGINGTTSPGPCDSPIALRFFMSSNLTVQRLRIKDSPQFH 345 (584)
Q Consensus 268 ~~~~~lI~~~~~~NVtI~G--~G~IDGnG~~ww~~~~~~~~g~~g~~~~g~~~rP~~I~f~~s~nvtI~gvti~ns~~~~ 345 (584)
+||.+ +.+||+|+| .|+|||+|..||+.... ++ ..||++|.|.+|+|++|+|++++|++.|+
T Consensus 88 ----~~i~~-~~~nv~I~G~~~g~IdG~G~~~w~~~~~-----~~------~~rP~~i~~~~~~nv~i~~iti~nsp~~~ 151 (362)
T 1czf_A 88 ----PLISM-SGEHITVTGASGHLINCDGARWWDGKGT-----SG------KKKPKFFYAHGLDSSSITGLNIKNTPLMA 151 (362)
T ss_dssp ----CSEEE-EEESCEEEECTTCEEECCGGGTCCSCTT-----SS------SCCCCCEEEEEEETEEEESCEEECCSSCC
T ss_pred ----cEEEE-eCccEEEEcCCCcEEECCCchhhcccCC-----CC------CCCCeEEEEeecccEEEEEEEEecCCccE
Confidence 57777 559999999 69999999999985321 11 27899999999999999999999999999
Q ss_pred eeeeccccEEEEeEEEECCCC----CCCCCceeecCcccEEEEceEEecCCCcEEeCCCceeEEEEecccCCCCcceeec
Q 040748 346 FRFDNCKNVHIESIHITAPAL----SPNTDGIHIENTNGVEIYNSVISNGDDCVSIGSGCYDVDIRNITCGPGHGISIGS 421 (584)
Q Consensus 346 I~i~~s~nV~I~nv~I~~~~~----~~ntDGI~i~~S~nV~I~n~~i~~gDDgIai~sgs~NV~I~Nc~~~~g~GI~IGS 421 (584)
+++. |+||+|+|++|.++.+ ++|+||||+.+|+||+|+||+|.++||||++++ .+||+|+||+|.++|||+|||
T Consensus 152 i~i~-~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS 229 (362)
T 1czf_A 152 FSVQ-ANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVNS-GENIWFTGGTCIGGHGLSIGS 229 (362)
T ss_dssp EEEE-CSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSCCEEEEE
T ss_pred EEEe-eCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEEEeC-CeEEEEEEEEEeCCceeEEee
Confidence 9999 9999999999999642 689999999999999999999999999999999 499999999999999999999
Q ss_pred cCCCCCCCcEEeEEEEeeEEecCCceEEEEeecCCCCeEEeEEEEceEEcCCc-ccEEEEEeecCCCCCCCCCCCeeEEe
Q 040748 422 LGNHNSRACVSNITVRDSVIKVSNNGVRIKTWQGGSGAVSGITFSNIHMNNVR-NPIIIDQYYCLTKDCTNKTSAVYVSD 500 (584)
Q Consensus 422 ~g~~~~~~~v~nI~I~Nit~~~s~~GI~Iks~~g~~G~V~NItf~NI~i~~v~-~~I~I~~~y~~~~~~~~~~~~~~I~n 500 (584)
++++ ..+.++||+|+||+|.++.+|++||+|.++.|.|+||+|+||+|+++. ++|.|++.|+....+..+.....|+|
T Consensus 230 ~G~~-~~~~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~~~~~p~~~~~i~n 308 (362)
T 1czf_A 230 VGDR-SNNVVKNVTIEHSTVSNSENAVRIKTISGATGSVSEITYSNIVMSGISDYGVVIQQDYEDGKPTGKPTNGVTIQD 308 (362)
T ss_dssp ECSS-SCCEEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEEEEEEEEEEEEEEEEEETTEECSCCCSSEEEEE
T ss_pred cccc-CCCCEEEEEEEeeEEECCceEEEEEEeCCCCceEeeEEEEeEEEECcccccEEEEEecCCCCCCCCCCCCceEEE
Confidence 8765 568999999999999999999999999999999999999999999997 79999999987544444456789999
Q ss_pred EEEEeEEEeecCCCCCeEEecCCCCceecEEEEeEEEEcCCCCccccceeeccee
Q 040748 501 ILYSNIKGTYDIRSPPMHFACSDTVPCTNLTLSEVELLPAKGDLVSDPFCWNAYG 555 (584)
Q Consensus 501 Itf~NI~gt~~~~~~~i~i~~~~~~~~~nItf~NI~i~~~~g~~~~~~~c~nv~G 555 (584)
|+|+||+++......++.+.|. ..+|+||+|+||+|++.+ ....|+|++.
T Consensus 309 I~~~ni~gt~~~~~~~i~i~c~-~~~c~ni~~~nv~i~~~~----~~~~C~n~~~ 358 (362)
T 1czf_A 309 VKLESVTGSVDSGATEIYLLCG-SGSCSDWTWDDVKVTGGK----KSTACKNFPS 358 (362)
T ss_dssp EEEEEEEEEECTTSEEEEEECC-TTTEEEEEEEEEEEESSB----CCSCCBSCCT
T ss_pred EEEEEEEEEecCCceEEEEEeC-CCcCcCEEEEeEEEEcCC----CcccCcCCCC
Confidence 9999999998742357889997 789999999999999642 2357999884
No 6
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=100.00 E-value=2.4e-51 Score=431.98 Aligned_cols=320 Identities=27% Similarity=0.431 Sum_probs=273.0
Q ss_pred chHHHHHHHHHHHhhcCCcEEEEcCCeEEEeeeeeeecccCCceEEeeeeeecCCCCCCcccccCCcceeEEEeeeeceE
Q 040748 204 DDTEAFKMTWDSACQKDFAVIHVPYGFSFMIQSTIFTGPCQGSIVFQVDGTIMPPDGPESWLQKNSKRQWLVFYKINELS 283 (584)
Q Consensus 204 DdT~Aiq~Ai~~a~~~~g~~v~~p~G~tY~i~~~~ltgp~ksnvtL~l~GtL~~s~~~~~~~~~~~~~~lI~~~~~~NVt 283 (584)
.||+|||+||+++.+.++++|+||+| +|+. + + .++++++|+++|++++. +..|. .+|+.+.. +||+
T Consensus 6 ~dt~aiq~ai~~c~~~~g~~v~vP~G-~~~~--l--~-~l~~~~~l~~~g~~~~~--~~~w~-----g~~i~~~~-~nv~ 71 (339)
T 2iq7_A 6 TDAAAAIKGKASCTSIILNGIVVPAG-TTLD--M--T-GLKSGTTVTFQGKTTFG--YKEWE-----GPLISFSG-TNIN 71 (339)
T ss_dssp SCHHHHHHHGGGCSEEEEESCEECTT-CCEE--E--C-SCCTTCEEEEESEEEEC--CCCSC-----CCSEEEEE-ESCE
T ss_pred CCHHHHHHHHHHhhccCCCeEEECCC-EEEE--e--e-ccCCCeEEEEeCcEEcc--ccccc-----CcEEEEEc-ccEE
Confidence 48999999999765444789999999 5653 2 1 22789999999987653 34554 25777755 9999
Q ss_pred EecC--eEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCeeEEEEeecCceEeeeeEecCCCceeeeeccccEEEEeEEE
Q 040748 284 LQGG--GTIDGRGHKWWDLPCKPHKGINGTTSPGPCDSPIALRFFMSSNLTVQRLRIKDSPQFHFRFDNCKNVHIESIHI 361 (584)
Q Consensus 284 I~G~--G~IDGnG~~ww~~~~~~~~g~~g~~~~g~~~rP~~I~f~~s~nvtI~gvti~ns~~~~I~i~~s~nV~I~nv~I 361 (584)
|+|. |+|||+|..||+.... ++ ...||++|.|.+|+|++|+|++++|++.|++++..|++|+|++++|
T Consensus 72 I~G~~gG~IdG~G~~~w~~~~~-----~~-----~~~rp~~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~i~~~~I 141 (339)
T 2iq7_A 72 INGASGHSIDCQGSRWWDSKGS-----NG-----GKTKPKFFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLGVYDVII 141 (339)
T ss_dssp EEECTTCEEECCGGGTCCSCGG-----GS-----SSCCCCCEEEEEEEEEEEECCEEECCSSCCEEEESCEEEEEESCEE
T ss_pred EEcCCCCEEECCcccccccccc-----cC-----CCCCCeEEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEEEEEEEE
Confidence 9997 7999999999975321 11 1268999999999999999999999999999999999999999999
Q ss_pred ECCCC----CCCCCceeecCcccEEEEceEEecCCCcEEeCCCceeEEEEecccCCCCcceeeccCCCCCCCcEEeEEEE
Q 040748 362 TAPAL----SPNTDGIHIENTNGVEIYNSVISNGDDCVSIGSGCYDVDIRNITCGPGHGISIGSLGNHNSRACVSNITVR 437 (584)
Q Consensus 362 ~~~~~----~~ntDGI~i~~S~nV~I~n~~i~~gDDgIai~sgs~NV~I~Nc~~~~g~GI~IGS~g~~~~~~~v~nI~I~ 437 (584)
.++.. ++|+|||++.+|++|+|+||+|.++||||++++ .+||+|+||+|.++|||+|||++++ ..+.++||+|+
T Consensus 142 ~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDciaiks-g~nI~i~n~~~~~ghGisiGSlg~~-~~~~v~nV~v~ 219 (339)
T 2iq7_A 142 DNSAGDSAGGHNTDAFDVGSSTGVYISGANVKNQDDCLAINS-GTNITFTGGTCSGGHGLSIGSVGGR-SDNTVKTVTIS 219 (339)
T ss_dssp ECGGGGGTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSCCEEEEEESSS-SCCEEEEEEEE
T ss_pred ECCccccccCCCCCcEEEcCcceEEEEecEEecCCCEEEEcC-CccEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEE
Confidence 99743 689999999999999999999999999999999 5999999999999999999998765 56899999999
Q ss_pred eeEEecCCceEEEEeecCCCCeEEeEEEEceEEcCCcc-cEEEEEeecCCCCCCCCCCCeeEEeEEEEeEEEeecCCCCC
Q 040748 438 DSVIKVSNNGVRIKTWQGGSGAVSGITFSNIHMNNVRN-PIIIDQYYCLTKDCTNKTSAVYVSDILYSNIKGTYDIRSPP 516 (584)
Q Consensus 438 Nit~~~s~~GI~Iks~~g~~G~V~NItf~NI~i~~v~~-~I~I~~~y~~~~~~~~~~~~~~I~nItf~NI~gt~~~~~~~ 516 (584)
||+|.++.+|++||+|.++.|.|+||+|+||+|+++.+ +|.|++.|+....+..+...+.|+||+|+||+++......+
T Consensus 220 n~~~~~~~~girIkt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p~~~~~i~ni~~~ni~gt~~~~~~~ 299 (339)
T 2iq7_A 220 NSKIVNSDNGVRIKTVSGATGSVSGVTYSGITLSNIAKYGIVIEQDYENGSPTGTPTNGVPITGLTLSKITGSVASSGTN 299 (339)
T ss_dssp EEEEESCSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCCCSSSCEEEEEEEEEEEEECTTSEE
T ss_pred eeEEECCCcEEEEEEeCCCCeEEEEEEEEeEEccCcccccEEEEeecCCCCCCCCCCCCceEEEEEEEeEEEEeCCCCEE
Confidence 99999999999999999989999999999999999986 99999999875444444556899999999999998752357
Q ss_pred eEEecCCCCceecEEEEeEEEEcCCCCccccceeecce
Q 040748 517 MHFACSDTVPCTNLTLSEVELLPAKGDLVSDPFCWNAY 554 (584)
Q Consensus 517 i~i~~~~~~~~~nItf~NI~i~~~~g~~~~~~~c~nv~ 554 (584)
+.|.|. ..+|+||+|+||+|++.+ ....|+|+.
T Consensus 300 ~~i~c~-~~~c~ni~~~nv~i~~~~----~~~~C~n~~ 332 (339)
T 2iq7_A 300 VYILCA-SGACSNWKWSGVSVTGGK----KSTKCSNIP 332 (339)
T ss_dssp EEEECC-TTCEEEEEEEEEEEESSB----CCSCCBCCC
T ss_pred EEEEeC-CCcEecEEEEeEEEEcCC----CcccccCCC
Confidence 889995 889999999999999643 235799987
No 7
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=1.8e-51 Score=432.49 Aligned_cols=321 Identities=28% Similarity=0.451 Sum_probs=273.3
Q ss_pred cchHHHHHHHHHHHhhcCCcEEEEcCCeEEEeeeeeeecccCCceEEeeeeeecCCCCCCcccccCCcceeEEEeeeece
Q 040748 203 SDDTEAFKMTWDSACQKDFAVIHVPYGFSFMIQSTIFTGPCQGSIVFQVDGTIMPPDGPESWLQKNSKRQWLVFYKINEL 282 (584)
Q Consensus 203 tDdT~Aiq~Ai~~a~~~~g~~v~~p~G~tY~i~~~~ltgp~ksnvtL~l~GtL~~s~~~~~~~~~~~~~~lI~~~~~~NV 282 (584)
..||+|||+|++++++.++++|+||+| +|+. + + .++++++|+++|++++. +..|.. +|+.+. .+||
T Consensus 5 ~~~t~aiq~ai~~c~~~gg~~v~vP~G-~~~~--l--~-~l~~~~~l~~~g~~~~~--~~~w~g-----~li~~~-~~nv 70 (336)
T 1nhc_A 5 FTSASEASESISSCSDVVLSSIEVPAG-ETLD--L--S-DAADGSTITFEGTTSFG--YKEWKG-----PLIRFG-GKDL 70 (336)
T ss_dssp ESSHHHHHHHGGGCSEEEEESCEECTT-CCEE--C--T-TCCTTCEEEEESEEEEC--CCCSCC-----CSEECC-EESC
T ss_pred ECCHHHHHHHHHHhhccCCCeEEECCC-EEEE--e--e-ccCCCeEEEEeceEEcc--cccccC-----cEEEEe-cCCE
Confidence 458999999999765445689999999 4652 2 1 12789999999988753 345542 467664 5999
Q ss_pred EEecC--eEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCeeEEEEeecCceEeeeeEecCCCceeeeeccccEEEEeEE
Q 040748 283 SLQGG--GTIDGRGHKWWDLPCKPHKGINGTTSPGPCDSPIALRFFMSSNLTVQRLRIKDSPQFHFRFDNCKNVHIESIH 360 (584)
Q Consensus 283 tI~G~--G~IDGnG~~ww~~~~~~~~g~~g~~~~g~~~rP~~I~f~~s~nvtI~gvti~ns~~~~I~i~~s~nV~I~nv~ 360 (584)
+|+|. |+|||+|..||+.... ++ ...||++|.|.+|+|++|+|++++|++.|++++. |++|+|++++
T Consensus 71 ~I~G~~gG~IdG~G~~~w~~~~~-----~~-----~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~-~~nv~i~~~~ 139 (336)
T 1nhc_A 71 TVTMADGAVIDGDGSRWWDSKGT-----NG-----GKTKPKFMYIHDVEDSTFKGINIKNTPVQAISVQ-ATNVHLNDFT 139 (336)
T ss_dssp EEEECTTCEEECCGGGTCCSCTT-----TS-----SSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEE-EEEEEEESCE
T ss_pred EEEcCCCeEEECCccccccccCc-----CC-----CCCCceEEEEeeeCcEEEEEEEEEeCCccEEEEE-eCCEEEEEEE
Confidence 99997 7999999999975321 11 1268999999999999999999999999999999 9999999999
Q ss_pred EECCCC----CCCCCceeecCcccEEEEceEEecCCCcEEeCCCceeEEEEecccCCCCcceeeccCCCCCCCcEEeEEE
Q 040748 361 ITAPAL----SPNTDGIHIENTNGVEIYNSVISNGDDCVSIGSGCYDVDIRNITCGPGHGISIGSLGNHNSRACVSNITV 436 (584)
Q Consensus 361 I~~~~~----~~ntDGI~i~~S~nV~I~n~~i~~gDDgIai~sgs~NV~I~Nc~~~~g~GI~IGS~g~~~~~~~v~nI~I 436 (584)
|.++.. ++|+||||+.+|++|+|+||+|.++||||++++ .+||+|+||+|.++|||+|||++++ ..+.++||+|
T Consensus 140 I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~gDDciaiks-g~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v 217 (336)
T 1nhc_A 140 IDNSDGDDNGGHNTDGFDISESTGVYISGATVKNQDDCIAINS-GESISFTGGTCSGGHGLSIGSVGGR-DDNTVKNVTI 217 (336)
T ss_dssp EECTTHHHHTCCSCCSEEECSCEEEEEESCEEESSSEEEEESS-EEEEEEESCEEESSSEEEEEEESSS-SCCEEEEEEE
T ss_pred EECCCcccccCCCCCcEEecCCCeEEEEeCEEEcCCCEEEEeC-CeEEEEEeEEEECCcCceEccCccc-cCCCEEEEEE
Confidence 999753 689999999999999999999999999999999 5999999999999999999998765 4679999999
Q ss_pred EeeEEecCCceEEEEeecCCCCeEEeEEEEceEEcCCcc-cEEEEEeecCCCCCCCCCCCeeEEeEEEEeEEEeecCCCC
Q 040748 437 RDSVIKVSNNGVRIKTWQGGSGAVSGITFSNIHMNNVRN-PIIIDQYYCLTKDCTNKTSAVYVSDILYSNIKGTYDIRSP 515 (584)
Q Consensus 437 ~Nit~~~s~~GI~Iks~~g~~G~V~NItf~NI~i~~v~~-~I~I~~~y~~~~~~~~~~~~~~I~nItf~NI~gt~~~~~~ 515 (584)
+||+|.++.+|++||+|.++.|.|+||+|+||+|+++.+ +|.|++.|+....+..+...+.|+||+|+||+++......
T Consensus 218 ~n~~~~~t~~girIkt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p~~~~~i~~i~~~ni~gt~~~~~~ 297 (336)
T 1nhc_A 218 SDSTVSNSANGVRIKTIYKETGDVSEITYSNIQLSGITDYGIVIEQDYENGSPTGTPSTGIPITDVTVDGVTGTLEDDAT 297 (336)
T ss_dssp EEEEEESCSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCCCSSSCEEEEEEEEEEEEECTTCE
T ss_pred EeeEEECCCcEEEEEEECCCCCEEeeeEEeeEEeeccccccEEEEeecCCCCCCCCCCCCceEEEEEEEeEEEEeCCCCE
Confidence 999999999999999999999999999999999999986 9999999987544444455789999999999999875235
Q ss_pred CeEEecCCCCceecEEEEeEEEEcCCCCccccceeeccee
Q 040748 516 PMHFACSDTVPCTNLTLSEVELLPAKGDLVSDPFCWNAYG 555 (584)
Q Consensus 516 ~i~i~~~~~~~~~nItf~NI~i~~~~g~~~~~~~c~nv~G 555 (584)
++.+.|. ..+|+||+|+||+|++.+ ....|+|+.+
T Consensus 298 ~v~i~c~-~~~c~ni~~~nv~i~~~~----~~~~C~n~~~ 332 (336)
T 1nhc_A 298 QVYILCG-DGSCSDWTWSGVDLSGGK----TSDKCENVPS 332 (336)
T ss_dssp EEEEECC-TTCEEEEEEEEEEEESSB----CCSCCBSCCT
T ss_pred EEEEEcC-CCcEecEEEEeEEEEcCC----CCcccCCCCC
Confidence 6889994 889999999999999743 2357999885
No 8
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=100.00 E-value=9.2e-51 Score=429.03 Aligned_cols=322 Identities=24% Similarity=0.379 Sum_probs=272.8
Q ss_pred hHHHHHHHHHHHhhcCCcEEEEcCCeEEEeeeeeeecccCCceEEeeeeeecCCCCCCcccccCCcceeEEEeeeeceEE
Q 040748 205 DTEAFKMTWDSACQKDFAVIHVPYGFSFMIQSTIFTGPCQGSIVFQVDGTIMPPDGPESWLQKNSKRQWLVFYKINELSL 284 (584)
Q Consensus 205 dT~Aiq~Ai~~a~~~~g~~v~~p~G~tY~i~~~~ltgp~ksnvtL~l~GtL~~s~~~~~~~~~~~~~~lI~~~~~~NVtI 284 (584)
||+|||+|++++.+.++++|+||+| +|+. + + .++++++|+++|++++. ...|. ..+||.+. .+||+|
T Consensus 7 ~t~aiq~ai~~c~~~gg~~v~vP~G-~~l~--l--~-~l~~~~~l~~~g~~~~~--~~~w~----~g~~i~~~-~~ni~I 73 (349)
T 1hg8_A 7 EYSGLATAVSSCKNIVLNGFQVPTG-KQLD--L--S-SLQNDSTVTFKGTTTFA--TTADN----DFNPIVIS-GSNITI 73 (349)
T ss_dssp SGGGHHHHHHHCSEEEECCCEECTT-CCEE--E--T-TCCTTCEEEECSEEEEC--CCCCT----TCCSEEEE-EESCEE
T ss_pred CHHHHHHHHHhccccCCCEEEECCC-EEEE--e--e-ccCCCeEEEEcCceecc--ccccc----CCceEEEE-CccEEE
Confidence 7999999999765445789999999 5653 1 1 22789999999987653 34562 23677774 599999
Q ss_pred ec--CeEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCeeEEE-E-eecCceEeeeeEecCCCceeeeeccccEEEEeEE
Q 040748 285 QG--GGTIDGRGHKWWDLPCKPHKGINGTTSPGPCDSPIALRF-F-MSSNLTVQRLRIKDSPQFHFRFDNCKNVHIESIH 360 (584)
Q Consensus 285 ~G--~G~IDGnG~~ww~~~~~~~~g~~g~~~~g~~~rP~~I~f-~-~s~nvtI~gvti~ns~~~~I~i~~s~nV~I~nv~ 360 (584)
+| .|+|||+|..||+.... ++. ...||++|.| . .|++++|+|++++|++.|++++..|++|+|++++
T Consensus 74 ~G~~~G~IdG~G~~ww~~~~~-----~~~----~~~rP~~i~~~~~~~~nv~I~giti~nsp~~~i~i~~~~nv~i~~~~ 144 (349)
T 1hg8_A 74 TGASGHVIDGNGQAYWDGKGS-----NSN----SNQKPDHFIVVQKTTGNSKITNLNIQNWPVHCFDITGSSQLTISGLI 144 (349)
T ss_dssp EECTTCEEECCGGGTCCSCTT-----CTT----SCCCCSEEEEEEEEESSEEEESCEEECCSSEEEEEESCEEEEEEEEE
T ss_pred EecCCCEEcCCcchhhhcccc-----cCC----CCCCCeEEEEeecCcCcEEEEEEEEEcCCCceEEEeccCCEEEEEEE
Confidence 99 69999999999985321 111 1158999999 7 7889999999999999999999999999999999
Q ss_pred EECCC-C-----------CCCCCceeecCcccEEEEceEEecCCCcEEeCCCceeEEEEecccCCCCcceeeccCCCCCC
Q 040748 361 ITAPA-L-----------SPNTDGIHIENTNGVEIYNSVISNGDDCVSIGSGCYDVDIRNITCGPGHGISIGSLGNHNSR 428 (584)
Q Consensus 361 I~~~~-~-----------~~ntDGI~i~~S~nV~I~n~~i~~gDDgIai~sgs~NV~I~Nc~~~~g~GI~IGS~g~~~~~ 428 (584)
|.++. + .+|+|||++.+|++|+|+||+|.++||||++++ ++||+|+||+|.++|||+|||++++ ..
T Consensus 145 I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~G~~-~~ 222 (349)
T 1hg8_A 145 LDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTS-GTNIVVSNMYCSGGHGLSIGSVGGK-SD 222 (349)
T ss_dssp EECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSSCSEEESS-EEEEEEEEEEEESSCCEEEEEESSS-SC
T ss_pred EECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEecCCCeEEeeC-CeEEEEEeEEEeCCcceEEcccccc-cc
Confidence 99863 2 489999999999999999999999999999999 5999999999999999999999765 56
Q ss_pred CcEEeEEEEeeEEecCCceEEEEeecCCCCeEEeEEEEceEEcCCc-ccEEEEEeecCCCCCCCCCCCeeEEeEEEEeEE
Q 040748 429 ACVSNITVRDSVIKVSNNGVRIKTWQGGSGAVSGITFSNIHMNNVR-NPIIIDQYYCLTKDCTNKTSAVYVSDILYSNIK 507 (584)
Q Consensus 429 ~~v~nI~I~Nit~~~s~~GI~Iks~~g~~G~V~NItf~NI~i~~v~-~~I~I~~~y~~~~~~~~~~~~~~I~nItf~NI~ 507 (584)
+.++||+|+||+|.++.+|++||+|.++.|.|+||+|+||+|+++. ++|.|++.|+....+..+...+.|+||+|+||+
T Consensus 223 ~~v~nV~v~n~~~~~~~~GirIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y~~~~~~~~p~~~~~i~~I~~~ni~ 302 (349)
T 1hg8_A 223 NVVDGVQFLSSQVVNSQNGCRIKSNSGATGTINNVTYQNIALTNISTYGVDVQQDYLNGGPTGKPTNGVKISNIKFIKVT 302 (349)
T ss_dssp CEEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEEEEEEEEEEEEEEEEECSSSBCSCCCSSEEEEEEEEEEEE
T ss_pred CCEEEEEEEEEEEECCCcEEEEEecCCCCccccceEEEEEEEEccccccEEEEeeccCCCCCCcccCCceEEEEEEEeEE
Confidence 8999999999999999999999999998999999999999999997 699999999875555445567899999999999
Q ss_pred EeecCCCCCeEEecCCCCceecEEEEeEEEEcCCCCccccceeeccee
Q 040748 508 GTYDIRSPPMHFACSDTVPCTNLTLSEVELLPAKGDLVSDPFCWNAYG 555 (584)
Q Consensus 508 gt~~~~~~~i~i~~~~~~~~~nItf~NI~i~~~~g~~~~~~~c~nv~G 555 (584)
++......++.+.|. ..+|+||+|+||+|++.+ ....|+|+.+
T Consensus 303 gt~~~~~~~v~i~c~-~~~c~ni~~~nv~i~~~~----~~~~C~n~~~ 345 (349)
T 1hg8_A 303 GTVASSAQDWFILCG-DGSCSGFTFSGNAITGGG----KTSSCNYPTN 345 (349)
T ss_dssp EEECTTSEEEEEECC-SSCEEEEEEESCEEECCS----SCCEECSSSS
T ss_pred EEeCCCCEEEEEEeC-CCcCcCEEEEeEEEEcCC----CCeeeeCCCC
Confidence 988752357889998 689999999999999643 2357999987
No 9
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=100.00 E-value=2.6e-50 Score=424.12 Aligned_cols=318 Identities=26% Similarity=0.419 Sum_probs=270.1
Q ss_pred hHHHHHHHHHHHhhcCCcEEEEcCCeEEEeeeeeeecccCCceEEeeeeeecCCCCCCcccccCCcceeEEEeeeeceEE
Q 040748 205 DTEAFKMTWDSACQKDFAVIHVPYGFSFMIQSTIFTGPCQGSIVFQVDGTIMPPDGPESWLQKNSKRQWLVFYKINELSL 284 (584)
Q Consensus 205 dT~Aiq~Ai~~a~~~~g~~v~~p~G~tY~i~~~~ltgp~ksnvtL~l~GtL~~s~~~~~~~~~~~~~~lI~~~~~~NVtI 284 (584)
-++|||+|++++++.++++|+||+| +|+. + + .++++++|+++|++++. +..|. .+||.+.. +||+|
T Consensus 11 g~~aiq~ai~~c~~~gg~~v~vP~G-~~l~--l--~-~l~~~~~l~~~g~~~~~--~~~w~-----g~li~~~~-~nv~I 76 (339)
T 1ia5_A 11 GASSASKSKTSCSTIVLSNVAVPSG-TTLD--L--T-KLNDGTHVIFSGETTFG--YKEWS-----GPLISVSG-SDLTI 76 (339)
T ss_dssp HHHHHHHHGGGCSEEEEESCEECTT-CCEE--E--C-SCCTTCEEEEESEEEEC--CCCSC-----CCSEEEEE-ESCEE
T ss_pred chHHHHHHHHHhhccCCCeEEECCC-EEEE--e--e-ccCCCeEEEEeCcEEcc--ccccc-----CcEEEEEc-CcEEE
Confidence 4679999999765545789999999 5652 2 1 12789999999987653 34554 35777755 99999
Q ss_pred ecC--eEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCeeEEEEeecCceEeeeeEecCCCceeeeeccccEEEEeEEEE
Q 040748 285 QGG--GTIDGRGHKWWDLPCKPHKGINGTTSPGPCDSPIALRFFMSSNLTVQRLRIKDSPQFHFRFDNCKNVHIESIHIT 362 (584)
Q Consensus 285 ~G~--G~IDGnG~~ww~~~~~~~~g~~g~~~~g~~~rP~~I~f~~s~nvtI~gvti~ns~~~~I~i~~s~nV~I~nv~I~ 362 (584)
+|. |+|||+|..||+.... ++ ...||++|.|.+|+|++|+|++++|++.|++++..|++|+|++++|.
T Consensus 77 ~G~~gG~IdG~G~~~w~~~~~-----~~-----~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv~i~~~~I~ 146 (339)
T 1ia5_A 77 TGASGHSINGDGSRWWDGEGG-----NG-----GKTKPKFFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTLKDITID 146 (339)
T ss_dssp EECTTCEEECCGGGTCSSCTT-----TS-----SSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEESCEEEEEESCEEE
T ss_pred EcCCCeEEeCCCCcccccccc-----CC-----CCCCCeEEEEeecCcEEEEEEEEEcCCcceEEEecccCeEEeeEEEE
Confidence 997 7999999999985321 11 12689999999999999999999999999999999999999999999
Q ss_pred CCCC----CCCCCceeecCcccEEEEceEEecCCCcEEeCCCceeEEEEecccCCCCcceeeccCCCCCCCcEEeEEEEe
Q 040748 363 APAL----SPNTDGIHIENTNGVEIYNSVISNGDDCVSIGSGCYDVDIRNITCGPGHGISIGSLGNHNSRACVSNITVRD 438 (584)
Q Consensus 363 ~~~~----~~ntDGI~i~~S~nV~I~n~~i~~gDDgIai~sgs~NV~I~Nc~~~~g~GI~IGS~g~~~~~~~v~nI~I~N 438 (584)
++.. ++|+|||++.+|++|+|+||+|.++||||++++ .+||+|+||+|.++|||+|||++++ ..+.++||+|+|
T Consensus 147 ~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v~n 224 (339)
T 1ia5_A 147 NSDGDDNGGHNTDAFDIGTSTYVTISGATVYNQDDCVAVNS-GENIYFSGGYCSGGHGLSIGSVGGR-SDNTVKNVTFVD 224 (339)
T ss_dssp CGGGTTTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSSCEEEEEECSS-SCCEEEEEEEEE
T ss_pred CCccccccCCCCCcEEecCCceEEEEeeEEEcCCCeEEEeC-CeEEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEEe
Confidence 9742 689999999999999999999999999999999 5999999999999999999998765 468899999999
Q ss_pred eEEecCCceEEEEeecCCCCeEEeEEEEceEEcCCcc-cEEEEEeecCCCCCCCCCCCeeEEeEEEEeEEEeecCCCCCe
Q 040748 439 SVIKVSNNGVRIKTWQGGSGAVSGITFSNIHMNNVRN-PIIIDQYYCLTKDCTNKTSAVYVSDILYSNIKGTYDIRSPPM 517 (584)
Q Consensus 439 it~~~s~~GI~Iks~~g~~G~V~NItf~NI~i~~v~~-~I~I~~~y~~~~~~~~~~~~~~I~nItf~NI~gt~~~~~~~i 517 (584)
|+|.++.+|++||+|.++.|.|+||+|+||+|+++.+ +|.|++.|.. .+..+...+.|+||+|+||+++......++
T Consensus 225 ~~~~~t~~girIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~--~~~~p~~~~~i~ni~~~ni~gt~~~~~~~v 302 (339)
T 1ia5_A 225 STIINSDNGVRIKTNIDTTGSVSDVTYKDITLTSIAKYGIVVQQNYGD--TSSTPTTGVPITDFVLDNVHGSVVSSGTNI 302 (339)
T ss_dssp EEEESCSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEETC--TTSCCCSSSCEEEEEEEEEEEEECTTSEEE
T ss_pred eEEECCCcEEEEEEeCCCCcEEEeeEEEEEEEECcccccEEEEccCCC--CCCCCcCCceEEEEEEEeEEEEeCCCCEEE
Confidence 9999999999999999989999999999999999986 9999999942 343444568999999999999987423578
Q ss_pred EEecCCCCceecEEEEeEEEEcCCCCccccceeeccee
Q 040748 518 HFACSDTVPCTNLTLSEVELLPAKGDLVSDPFCWNAYG 555 (584)
Q Consensus 518 ~i~~~~~~~~~nItf~NI~i~~~~g~~~~~~~c~nv~G 555 (584)
.|.|. ..+|+||+|+||+|++.+ ....|+|+..
T Consensus 303 ~i~c~-~~~c~ni~~~nv~i~~~~----~~~~C~n~~~ 335 (339)
T 1ia5_A 303 LISCG-SGSCSDWTWTDVSVSGGK----TSSKCTNVPS 335 (339)
T ss_dssp EEECC-TTCEEEEEEEEEEEESSB----CCSCCBSCCT
T ss_pred EEEeC-CCCEecEEEEeEEEECCC----CCeeeECCCC
Confidence 89995 889999999999999643 2357999874
No 10
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=100.00 E-value=1.9e-50 Score=424.21 Aligned_cols=311 Identities=22% Similarity=0.322 Sum_probs=262.9
Q ss_pred HHHHHHHHHHHhhcCCcEEEEcCCeEEEeeeeeeecccCCceEEeeeeeecCCCCCCcccccCCcceeEEEeeeeceEEe
Q 040748 206 TEAFKMTWDSACQKDFAVIHVPYGFSFMIQSTIFTGPCQGSIVFQVDGTIMPPDGPESWLQKNSKRQWLVFYKINELSLQ 285 (584)
Q Consensus 206 T~Aiq~Ai~~a~~~~g~~v~~p~G~tY~i~~~~ltgp~ksnvtL~l~GtL~~s~~~~~~~~~~~~~~lI~~~~~~NVtI~ 285 (584)
++|||+ ++++++.++++|+||+|+ |+ .+. |+++++|+++|++++. ...|.. +||.+. .+||+|+
T Consensus 8 ~~aiq~-i~aC~~~gg~~v~vP~G~-~l--~l~----l~~~~~l~~~g~~~~~--~~~w~~-----~~i~~~-~~ni~I~ 71 (335)
T 1k5c_A 8 VDDAKD-IAGCSAVTLNGFTVPAGN-TL--VLN----PDKGATVTMAGDITFA--KTTLDG-----PLFTID-GTGINFV 71 (335)
T ss_dssp TTGGGG-CTTCSEEEECCEEECTTC-CE--EEC----CCTTCEEEECSCEEEC--CCCSCS-----CSEEEE-EEEEEEE
T ss_pred HHHhHH-HHhcccCCCCEEEECCCE-EE--EEE----eCCCeEEEEeccEecc--cccccC-----cEEEEE-ccCEEEE
Confidence 789999 886544457899999994 65 222 3899999999998763 355643 578876 5999999
Q ss_pred c-CeEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCeeEEEEeecCceEeeeeEecCCCceeeeecccc-EEEEeEEEEC
Q 040748 286 G-GGTIDGRGHKWWDLPCKPHKGINGTTSPGPCDSPIALRFFMSSNLTVQRLRIKDSPQFHFRFDNCKN-VHIESIHITA 363 (584)
Q Consensus 286 G-~G~IDGnG~~ww~~~~~~~~g~~g~~~~g~~~rP~~I~f~~s~nvtI~gvti~ns~~~~I~i~~s~n-V~I~nv~I~~ 363 (584)
| .|+|||+|+.||+.... ++ ...||++|.|.+|+ ++|+||+++|++.|++++..|+| |+|+|++|.+
T Consensus 72 G~~G~idG~G~~ww~~~~~-----~~-----~~~rP~~i~~~~~~-v~i~giti~nsp~~~i~i~~~~n~v~i~~v~I~~ 140 (335)
T 1k5c_A 72 GADHIFDGNGALYWDGKGT-----NN-----GTHKPHPFLKIKGS-GTYKKFEVLNSPAQAISVGPTDAHLTLDGITVDD 140 (335)
T ss_dssp CTTCEEECCGGGTCCSCTT-----TS-----SSCCCCCSEEEEEE-EEEESCEEESCSSCCEEEEEEEEEEEEESCEEEC
T ss_pred eCccEEcCChhHhhhcccc-----cC-----CCCCCeEEEEeceE-EEEEEEEEECCCcceEEEEccCCeEEEEEEEEEC
Confidence 9 69999999999975321 11 12699999999999 99999999999999999999999 9999999999
Q ss_pred CCC-----CCCCCceeecCcccEEEEceEEecCCCcEEeCCCceeEEEEecccCCCCcceeeccCCCCCCCcEEeEEEEe
Q 040748 364 PAL-----SPNTDGIHIENTNGVEIYNSVISNGDDCVSIGSGCYDVDIRNITCGPGHGISIGSLGNHNSRACVSNITVRD 438 (584)
Q Consensus 364 ~~~-----~~ntDGI~i~~S~nV~I~n~~i~~gDDgIai~sgs~NV~I~Nc~~~~g~GI~IGS~g~~~~~~~v~nI~I~N 438 (584)
+.. ++|+||||+ +|+||+|+||+|.++||||+++++ +||+|+||+|..+|||+|||+++ .+.++||+|+|
T Consensus 141 ~~~d~~~~~~NtDGidi-~s~nV~I~n~~i~~gDDcIaiksg-~nI~i~n~~~~~ghGisIGS~g~---~~~v~nV~v~n 215 (335)
T 1k5c_A 141 FAGDTKNLGHNTDGFDV-SANNVTIQNCIVKNQDDCIAINDG-NNIRFENNQCSGGHGISIGSIAT---GKHVSNVVIKG 215 (335)
T ss_dssp GGGGGGGCCCSCCSEEE-ECSSEEEESCEEESSSCSEEEEEE-EEEEEESCEEESSCCEEEEEECT---TCEEEEEEEES
T ss_pred CCCcccccCCCCCeEcc-cCCeEEEEeeEEEcCCCEEEeeCC-eeEEEEEEEEECCccCeEeeccC---CCCEEEEEEEe
Confidence 743 789999999 999999999999999999999995 99999999999999999999964 57899999999
Q ss_pred eEEecCCceEEEEeecCCC-CeEEeEEEEceEEcCCc-ccEEEEEeecCCCCCCCCCCCeeEEeEEEEeEE--EeecCCC
Q 040748 439 SVIKVSNNGVRIKTWQGGS-GAVSGITFSNIHMNNVR-NPIIIDQYYCLTKDCTNKTSAVYVSDILYSNIK--GTYDIRS 514 (584)
Q Consensus 439 it~~~s~~GI~Iks~~g~~-G~V~NItf~NI~i~~v~-~~I~I~~~y~~~~~~~~~~~~~~I~nItf~NI~--gt~~~~~ 514 (584)
|+|.++.+|+|||+|.++. |.|+||+|+||+|+++. +||.|++.|.. .+..+.....|+||+|+||+ ++.....
T Consensus 216 ~~~~~t~~girIKt~~g~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~--~~~~p~~~~~i~nI~~~nI~~~Gt~~~~~ 293 (335)
T 1k5c_A 216 NTVTRSMYGVRIKAQRTATSASVSGVTYDANTISGIAKYGVLISQSYPD--DVGNPGTGAPFSDVNFTGGATTIKVNNAA 293 (335)
T ss_dssp CEEEEEEEEEEEEEETTCCSCEEEEEEEESCEEEEEEEEEEEEEEEETS--SSSSCCSSSCEEEEEECSSCEEEEECTTC
T ss_pred eEEECCCceEEEEEeCCCCcceEeeeEEEEEEEEccccccEEEEeeCCC--CCCCCCCCceEEEEEEEEEEEeeEEcCCc
Confidence 9999999999999999988 99999999999999997 69999999942 33334456899999999999 7765323
Q ss_pred CCeEEecCCCCceecEEEEeEEEEcCCCCccccceeeccee
Q 040748 515 PPMHFACSDTVPCTNLTLSEVELLPAKGDLVSDPFCWNAYG 555 (584)
Q Consensus 515 ~~i~i~~~~~~~~~nItf~NI~i~~~~g~~~~~~~c~nv~G 555 (584)
.++.|.|++ +|+||+|+||+|++.+.. ...+.++..
T Consensus 294 ~~i~i~c~~--~c~ni~~~nv~i~~~~~~---~~~~~~~~~ 329 (335)
T 1k5c_A 294 TRVTVECGN--CSGNWNWSQLTVTGGKAG---TIKSDKAKI 329 (335)
T ss_dssp EEEEEECSS--EESEEEEEEEEEESSBCC---CEECTTCEE
T ss_pred eEEEEECCC--cCCCEEEEeEEEEcCCCC---ceEeEEeEe
Confidence 578999976 999999999999987643 245555543
No 11
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=100.00 E-value=1.1e-43 Score=390.48 Aligned_cols=298 Identities=12% Similarity=0.075 Sum_probs=246.0
Q ss_pred CceEEEecccccCCCCcchHHHHHHHHHHHhhcCCcEEEEcCCeEEEe------------eeeeeecccCCceEEeeeee
Q 040748 187 GNVIDVRKFGAVGDGISDDTEAFKMTWDSACQKDFAVIHVPYGFSFMI------------QSTIFTGPCQGSIVFQVDGT 254 (584)
Q Consensus 187 ~~~~~v~~~GA~gdg~tDdT~Aiq~Ai~~a~~~~g~~v~~p~G~tY~i------------~~~~ltgp~ksnvtL~l~Gt 254 (584)
..++||++|||+|| ||+|||+||++|++.++++|+||+|++|++ +.+.| +++++|+++|+
T Consensus 49 ~~~~nV~dfGA~gD----dT~AIqkAIdaCs~~GGgtV~VPaG~tYLt~sv~~gp~~~~sGpI~L----kSnVtL~LdGt 120 (600)
T 2x6w_A 49 DPSGNVIQPGPNVD----SRQYLQAAIDYVSSNGGGTITIPAGYTWYLGSYGVGGIAGHSGIIQL----RSNVNLNIEGR 120 (600)
T ss_dssp CTTSCBCCCCTTCC----CHHHHHHHHHHHHHTTCEEEEECTTCEEEECSCCCGGGGGGTEEEEC----CTTEEEEECSE
T ss_pred CcEEeeecCCCCcc----CHHHHHHHHHHhhhcCCCEEEECCCCEEEecccccccccccccceEE----cCceEEeeecE
Confidence 36889999999999 999999999977666789999999966999 67766 89999999999
Q ss_pred ecCCCCCCccccc---C-CcceeEEEeeeeceEEecCeEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCeeEEEEeecC
Q 040748 255 IMPPDGPESWLQK---N-SKRQWLVFYKINELSLQGGGTIDGRGHKWWDLPCKPHKGINGTTSPGPCDSPIALRFFMSSN 330 (584)
Q Consensus 255 L~~s~~~~~~~~~---~-~~~~lI~~~~~~NVtI~G~G~IDGnG~~ww~~~~~~~~g~~g~~~~g~~~rP~~I~f~~s~n 330 (584)
|+++.+..+|+.. . ....+|.+.+++||+|+|.|+|||+|..||.... + ...||+ |.|.+|+
T Consensus 121 L~as~d~~~yp~~~~v~~~w~slI~~~~~~NItItG~GtIDGqG~~wW~~~~----------~--~~~RP~-l~f~~c~- 186 (600)
T 2x6w_A 121 IHLSPFFDLKPFQVFVGFDNGDPASSGNLENCHIYGHGVVDFGGYEFGASSQ----------L--RNGVAF-GRSYNCS- 186 (600)
T ss_dssp EEECGGGTTSCEEEEECCSSSSGGGCCCEEEEEEESSCEEECTTCCCSSTTC----------C--EEEEEC-CSEEEEE-
T ss_pred EEEcCChHHCcccccccccccceEEEecceeEEEecceeeeCCccccccccc----------c--CCCCCE-EEEeeeE-
Confidence 9999988888641 0 1134588899999999999999999999996310 0 014677 8888988
Q ss_pred ceEeeeeEecC-CCceeee---eccccEEEEeEE----EECCCCCCCCCceeecCcccEEEEceEEecCCCcEEe-CCCc
Q 040748 331 LTVQRLRIKDS-PQFHFRF---DNCKNVHIESIH----ITAPALSPNTDGIHIENTNGVEIYNSVISNGDDCVSI-GSGC 401 (584)
Q Consensus 331 vtI~gvti~ns-~~~~I~i---~~s~nV~I~nv~----I~~~~~~~ntDGI~i~~S~nV~I~n~~i~~gDDgIai-~sgs 401 (584)
|+||+++|+ +.|++++ ..|+||+|+|++ |.+ ++|+||| |+|+||+|.++||||++ |+++
T Consensus 187 --I~GITi~NSDP~w~I~iG~~~~c~NVtI~nvtfi~aI~s---spNTDGI-------V~I~nc~I~tGDDCIAI~KSGs 254 (600)
T 2x6w_A 187 --VTGITFQNGDVTWAITLGWNGYGSNCYVRKCRFINLVNS---SVNADHS-------TVYVNCPYSGVESCYFSMSSSF 254 (600)
T ss_dssp --EESCEEESCCCSCSEEECBTTBEEEEEEESCEEECCCCC---SSCCCEE-------EEEECSSSEEEESCEEECCCTT
T ss_pred --EeCeEEECCCCccEEEeCCCCCcccEEEeCeEEcceEec---CCCCCEE-------EEEEeeEEecCCcEEEEecCCC
Confidence 999999999 9999999 999999999999 777 6899999 99999999999999999 9986
Q ss_pred e-eEEEEecccCCCC-cceeeccCCCCCCCcEEeEEEEeeEEecCCceEEEEeecCCCCeEEeEEEEceEEcCCcccEEE
Q 040748 402 Y-DVDIRNITCGPGH-GISIGSLGNHNSRACVSNITVRDSVIKVSNNGVRIKTWQGGSGAVSGITFSNIHMNNVRNPIII 479 (584)
Q Consensus 402 ~-NV~I~Nc~~~~g~-GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~~GI~Iks~~g~~G~V~NItf~NI~i~~v~~~I~I 479 (584)
. ++.++ +|..+| ||+|||+. .+.++||+|+| +||++.+++|.|+||+|+||+|+++.++|.+
T Consensus 255 ~~ni~~e--~~~~GHgGISIGSe~----~ggV~NV~V~N----------rIKt~~G~GG~V~NItfeNI~m~nV~~~I~i 318 (600)
T 2x6w_A 255 ARNIACS--VQLHQHDTFYRGSTV----NGYCRGAYVVM----------HAAEAAGAGSYAYNMQVENNIAVIYGQFVIL 318 (600)
T ss_dssp HHHHEEE--EEECSSSEEEESCEE----EEESEEEEEEE----------CGGGCTTTCSEEEEEEEESCEEEESSEEEEE
T ss_pred cCCeEEE--EEcCCCCcEEecccc----cCcEEEEEEEE----------EEEeecCCCceEEEEEEEEEEEEccceEEEe
Confidence 3 46777 566776 89999974 46788888888 6677778889999999999999999988888
Q ss_pred EEeecCCCCCCCCCCCeeEEeEEEEeEEEeecCCC-----CCeEEecCC-------CCceecEEEEeEEEEcCC
Q 040748 480 DQYYCLTKDCTNKTSAVYVSDILYSNIKGTYDIRS-----PPMHFACSD-------TVPCTNLTLSEVELLPAK 541 (584)
Q Consensus 480 ~~~y~~~~~~~~~~~~~~I~nItf~NI~gt~~~~~-----~~i~i~~~~-------~~~~~nItf~NI~i~~~~ 541 (584)
++.. .....+.|+||+|+||+++...+. ....+.+.+ +.+|++|+|+|+.+...+
T Consensus 319 ~q~~-------~~~s~~~IsnItfkNItgTsas~aav~~~~g~~i~g~p~~~~~~~~~~Ie~V~~~~~~~~~~~ 385 (600)
T 2x6w_A 319 GSDV-------TATVSGHLNDVIVSGNIVSIGERAAFSAPFGAFIDIGPDNSGASNVQDIQRVLVTGNSFYAPA 385 (600)
T ss_dssp EECB-------CSSCBCEEEEEEEESCEEEECSCCTTSSSCEEEEEECCCTTCCSSSCCEEEEEEESCEEECCT
T ss_pred CCCC-------CCCCCceEEEEEEEeEEEEeccccccccccceEEEecCcccccccccceeEEEEeceEEEcCC
Confidence 7641 234667999999999999875321 114455544 368999999999996533
No 12
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=100.00 E-value=1e-37 Score=346.24 Aligned_cols=308 Identities=13% Similarity=0.152 Sum_probs=237.1
Q ss_pred ceEEEe----cccccCCCCcchHHHHHHHHHHHhh--------------------------cCCcEEEEcCCeEEEe---
Q 040748 188 NVIDVR----KFGAVGDGISDDTEAFKMTWDSACQ--------------------------KDFAVIHVPYGFSFMI--- 234 (584)
Q Consensus 188 ~~~~v~----~~GA~gdg~tDdT~Aiq~Ai~~a~~--------------------------~~g~~v~~p~G~tY~i--- 234 (584)
..++|. .|||++||.+|++.+|. +|+.++. .++++|+||+| +|++
T Consensus 137 ~~~sv~~n~~~~~~~~dg~~~~~~~l~-ifa~p~~~~~~~P~~~~~~~~~~~~g~~~~~~~~ggg~v~vP~G-~yl~g~~ 214 (549)
T 1x0c_A 137 YRFSVEFDDDLISLAPSGARQPENALL-IFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPG-VYYFTGH 214 (549)
T ss_dssp EEEEEEEGGGEEEETTTTEEEESEEEE-EEEECCCCTTTSCCTTCSSEECCCSEECCCTTTCCCSEEEECSE-EEECCTT
T ss_pred cEEEEEECCccccccccCcCCCcceEE-EEcCChhhccCCCCcCCCCceeeccccccccccCCCCEEEECCe-EEecCCc
Confidence 555553 58999999999999987 4443322 24789999999 8997
Q ss_pred eeeeeecccCCceE-Eeee-ee-ecCCCCCCcccccCCcceeEEEeeeeceEEecCeEEeCCCCccccCCCCCCCCCCCC
Q 040748 235 QSTIFTGPCQGSIV-FQVD-GT-IMPPDGPESWLQKNSKRQWLVFYKINELSLQGGGTIDGRGHKWWDLPCKPHKGINGT 311 (584)
Q Consensus 235 ~~~~ltgp~ksnvt-L~l~-Gt-L~~s~~~~~~~~~~~~~~lI~~~~~~NVtI~G~G~IDGnG~~ww~~~~~~~~g~~g~ 311 (584)
+.+.| +++++ |+++ |. |+++ +++..+++||+|+|.|+|||+|..||..... .
T Consensus 215 G~i~l----~s~~~~L~l~~GA~L~gs--------------~~~~~~~~nv~ItG~GtIDG~G~~ww~~~~~-----~-- 269 (549)
T 1x0c_A 215 DHMVL----SSSVTWVYFAPGAYVKGA--------------VEFLSTASEVKASGHGVLSGEQYVWYADPDE-----G-- 269 (549)
T ss_dssp CCEEE----CTTCCEEEECTTEEEESC--------------EEECCCSSEEEEESSCEEECTTSCTTEEGGG-----T--
T ss_pred eEEEe----cCCCCeEecCCCCEEEEE--------------EEEecCceeEEEEeeEEEECCCceecccCcc-----c--
Confidence 36777 89999 9997 54 5432 2333389999999999999999999852100 0
Q ss_pred CCCCCCCCCeeEEE------EeecCceEeeeeEecCCCceeeee-cc-cc--EEEEeEEEECCCCCCCCCceeecCcccE
Q 040748 312 TSPGPCDSPIALRF------FMSSNLTVQRLRIKDSPQFHFRFD-NC-KN--VHIESIHITAPALSPNTDGIHIENTNGV 381 (584)
Q Consensus 312 ~~~g~~~rP~~I~f------~~s~nvtI~gvti~ns~~~~I~i~-~s-~n--V~I~nv~I~~~~~~~ntDGI~i~~S~nV 381 (584)
.......||++|.| .+|+|++|+|++++|+++|++++. .| ++ |+|+|+++.++. ++|+|||++. +||
T Consensus 270 ~~~~~~~rp~~i~~~~~~~~~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~-~~NTDGidi~--~nV 346 (549)
T 1x0c_A 270 YQKASGANNNGLRMWRGTLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAF-YGQTDGLEMY--PGT 346 (549)
T ss_dssp TEECGGGCSCCCCSEEEECCSSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCC-BTTCCCCBCC--TTC
T ss_pred ccccccCCCceEEEeeccccCCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCC-CCCCCccccc--CCE
Confidence 00000136777777 999999999999999999999966 55 69 999999999854 3589999999 899
Q ss_pred EEEceEEecCCCcEEeCCCceeEEEEecccCC--CCc-ceeeccCCCCCCCcEEeEEEEeeEEecCCc------eEEEEe
Q 040748 382 EIYNSVISNGDDCVSIGSGCYDVDIRNITCGP--GHG-ISIGSLGNHNSRACVSNITVRDSVIKVSNN------GVRIKT 452 (584)
Q Consensus 382 ~I~n~~i~~gDDgIai~sgs~NV~I~Nc~~~~--g~G-I~IGS~g~~~~~~~v~nI~I~Nit~~~s~~------GI~Iks 452 (584)
+|+||+|.++||||++++ +||+|+||+|+. +++ |+||+. .+.++||+|+||+|.++.+ |..|++
T Consensus 347 ~I~n~~i~~gDDcIaIks--~NI~I~n~~~~~~~g~~~IsiGs~-----~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~ 419 (549)
T 1x0c_A 347 ILQDVFYHTDDDGLKMYY--SNVTARNIVMWKESVAPVVEFGWT-----PRNTENVLFDNVDVIHQAYANAGNNPGIFGA 419 (549)
T ss_dssp EEEEEEEEESSCCEECCS--SSEEEEEEEEEECSSSCSEECCBS-----CCCEEEEEEEEEEEEECCCCSGGGCCCSEEE
T ss_pred EEEeeEEeCCCCEEEECC--CCEEEEeeEEEcCCCCceEEECCC-----CCcEEEEEEEeeEEECccccccccceEEEec
Confidence 999999999999999998 999999999975 466 999984 5789999999999998763 545776
Q ss_pred e--c--C-------CCCeEEeEEEEceEEcCCc-ccEEEEEeecCCCCCCCCCCCeeEEeEEEEeEEEeecCC----CCC
Q 040748 453 W--Q--G-------GSGAVSGITFSNIHMNNVR-NPIIIDQYYCLTKDCTNKTSAVYVSDILYSNIKGTYDIR----SPP 516 (584)
Q Consensus 453 ~--~--g-------~~G~V~NItf~NI~i~~v~-~~I~I~~~y~~~~~~~~~~~~~~I~nItf~NI~gt~~~~----~~~ 516 (584)
. . + ..|.|+||+|+||+|+++. +++.+.+.+. .++..|+||+|+||++..... ..+
T Consensus 420 ~~~~~~g~~~~~~d~~G~i~nI~f~NI~i~nv~~~g~~~~~~~g--------~pg~~I~nI~i~NI~i~~~~~~~~~~~~ 491 (549)
T 1x0c_A 420 VNNYLYAPDGLSSNHSTGNSNMTVRNITWSNFRAEGSSSALFRI--------NPIQNLDNISIKNVSIESFEPLSINTTE 491 (549)
T ss_dssp CCBTTTCTTSCCSCCCCBEEEEEEEEEEEEEEEEEEEECCSEEE--------CCSEEEEEEEEEEEEEEEECCGGGTCSC
T ss_pred ccccccCccccCcCCCceEccEEEEeEEEEeEEEeceEEeeecC--------CCCCcCccEEEEEEEEEccccccccccc
Confidence 1 1 2 2678999999999999987 6665543321 234579999999999766531 123
Q ss_pred eEEecCCC------CceecEEEEeEEEEcC
Q 040748 517 MHFACSDT------VPCTNLTLSEVELLPA 540 (584)
Q Consensus 517 i~i~~~~~------~~~~nItf~NI~i~~~ 540 (584)
..+.+.+. .+|+||+|+||+|.++
T Consensus 492 ~~i~G~~~~~~~~~~~v~nI~f~NV~i~G~ 521 (549)
T 1x0c_A 492 SWMPVWYDLNNGKQITVTDFSIEGFTVGNT 521 (549)
T ss_dssp EEECCCBBTTTCCBCCEEEEEEEEEEETTE
T ss_pred eEEeCCCccccccceeeeeEEEEeEEEeCe
Confidence 44544332 6899999999999765
No 13
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=100.00 E-value=4.3e-35 Score=318.68 Aligned_cols=298 Identities=13% Similarity=0.113 Sum_probs=217.5
Q ss_pred CceEE-EecccccCCCCcchHHHHHHHHHHHhhc-CCcEEEEcCCeEEEeeeeeeecccCCceEEeee--eeecCCCC--
Q 040748 187 GNVID-VRKFGAVGDGISDDTEAFKMTWDSACQK-DFAVIHVPYGFSFMIQSTIFTGPCQGSIVFQVD--GTIMPPDG-- 260 (584)
Q Consensus 187 ~~~~~-v~~~GA~gdg~tDdT~Aiq~Ai~~a~~~-~g~~v~~p~G~tY~i~~~~ltgp~ksnvtL~l~--GtL~~s~~-- 260 (584)
...++ |++|||+|||.+|||+|||+||++|++. ++++|+||+| +|+++++.| +++++|+++ ++|+++.+
T Consensus 19 ~~~~~~V~dfGA~gDG~tDdT~Aiq~Aidac~~~~ggg~V~vP~G-tYl~g~I~l----ks~v~L~l~~GatL~~s~~td 93 (464)
T 1h80_A 19 DVNYDLVDDFGANGNDTSDDSNALQRAINAISRKPNGGTLLIPNG-TYHFLGIQM----KSNVHIRVESDVIIKPTWNGD 93 (464)
T ss_dssp SEEEEHHHHHCCCTTSSSBCHHHHHHHHHHHHTSTTCEEEEECSS-EEEECSEEC----CTTEEEEECTTCEEEECCCTT
T ss_pred cceeeehhccCcCCCCCchhHHHHHHHHHHHhhccCCcEEEECCC-eEEEeeEec----cCceEEEEcCCcEEEeccCCC
Confidence 46778 9999999999999999999999977655 5889999999 899999888 899999998 57887753
Q ss_pred CCcccccCCcceeEEE---eeeeceEEecCe---EEeCCCCccccCCCCCCCCCCCCCCCCCCCCCeeEEEEeecCceEe
Q 040748 261 PESWLQKNSKRQWLVF---YKINELSLQGGG---TIDGRGHKWWDLPCKPHKGINGTTSPGPCDSPIALRFFMSSNLTVQ 334 (584)
Q Consensus 261 ~~~~~~~~~~~~lI~~---~~~~NVtI~G~G---~IDGnG~~ww~~~~~~~~g~~g~~~~g~~~rP~~I~f~~s~nvtI~ 334 (584)
...|+ ++.+ .+++||+|+|.| +|||+|... .||++|.|.+|+|++|+
T Consensus 94 ~~~y~-------~~~~~~~~~~~nItI~G~Gg~~~iDG~G~~~--------------------~rp~~i~~~~~~Nv~I~ 146 (464)
T 1h80_A 94 GKNHR-------LFEVGVNNIVRNFSFQGLGNGFLVDFKDSRD--------------------KNLAVFKLGDVRNYKIS 146 (464)
T ss_dssp CSCEE-------EEEESSSSCEEEEEEEECTTCEEEECTTCSC--------------------CBEEEEEECSEEEEEEE
T ss_pred cccCC-------ceEeecccCccceEEECcCcceEEeCCCCCC--------------------CCceEEEEEeeccEEEe
Confidence 33332 2333 689999999998 888876420 57889999999999999
Q ss_pred eeeEecCCCceeeeeccccEEEEeEEEECCCCCCCCCceeecCcccEEEEceEEecCCCcEE--eCCCceeEEEEecccC
Q 040748 335 RLRIKDSPQFHFRFDNCKNVHIESIHITAPALSPNTDGIHIENTNGVEIYNSVISNGDDCVS--IGSGCYDVDIRNITCG 412 (584)
Q Consensus 335 gvti~ns~~~~I~i~~s~nV~I~nv~I~~~~~~~ntDGI~i~~S~nV~I~n~~i~~gDDgIa--i~sgs~NV~I~Nc~~~ 412 (584)
|++++| .|.++ .|.+|.+ .|+|||++ .|++|+|+||+|.++||++. ...+++||+|+||+|.
T Consensus 147 gIti~n--~w~ih--~s~~V~i-----------~NtDGi~i-~s~nV~I~n~~I~~gddgiGs~~~~~~~NV~V~n~~~~ 210 (464)
T 1h80_A 147 NFTIDD--NKTIF--ASILVDV-----------TERNGRLH-WSRNGIIERIKQNNALFGYGLIQTYGADNILFRNLHSE 210 (464)
T ss_dssp EEEEEC--CSCBS--CSEEECE-----------EEETTEEE-EEEEEEEEEEEEESCCTTCEEEEESEEEEEEEEEEEEE
T ss_pred eeEEec--cceEe--eceeeee-----------ecCCCcee-eccCEEEeceEEecCCCeEEecccCCEeEEEEEeeEEE
Confidence 999999 45543 4433322 26899998 89999999999999999775 2345899999999999
Q ss_pred CCCcceeeccCC---CCCCCcEEeEEEEeeEEecCCceEEEEeecCCCCeEEeEEEEceEEcCCcccEEEEEeecCCCCC
Q 040748 413 PGHGISIGSLGN---HNSRACVSNITVRDSVIKVSNNGVRIKTWQGGSGAVSGITFSNIHMNNVRNPIIIDQYYCLTKDC 489 (584)
Q Consensus 413 ~g~GI~IGS~g~---~~~~~~v~nI~I~Nit~~~s~~GI~Iks~~g~~G~V~NItf~NI~i~~v~~~I~I~~~y~~~~~~ 489 (584)
+++||.|.+... ....+.++||+|+||+|.+..++|+|+.. .+.++||+|+||+++++..+|.|++.|+..-.
T Consensus 211 gg~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~~nv~~~I~I~p~---~~~isnItfeNI~~t~~~~aI~i~q~y~~~fd- 286 (464)
T 1h80_A 211 GGIALRMETDNLLMKNYKQGGIRNIFADNIRCSKGLAAVMFGPH---FMKNGDVQVTNVSSVSCGSAVRSDSGFVELFS- 286 (464)
T ss_dssp SSEEEEEECCCHHHHHHTCCEEEEEEEEEEEEESSSEEEEEECT---TCBCCCEEEEEEEEESSSCSEEECCCCCEECC-
T ss_pred CCCEEEEEeCCceeccCCCCcEEEEEEEeEEEECCceeEEEeCC---CceEeEEEEEEEEEEccceeEEEecCcccccC-
Confidence 877787765300 01357899999999999999999999953 24689999999999999999999998875321
Q ss_pred CCCCCCeeEEeEEEEeEE------Eeec--------CCCCCeEEecC-------------CCCceecEEEEeEEEEc
Q 040748 490 TNKTSAVYVSDILYSNIK------GTYD--------IRSPPMHFACS-------------DTVPCTNLTLSEVELLP 539 (584)
Q Consensus 490 ~~~~~~~~I~nItf~NI~------gt~~--------~~~~~i~i~~~-------------~~~~~~nItf~NI~i~~ 539 (584)
...-.+.+.+|.|.. ++.. ....++.+.|. +....++++++||+++.
T Consensus 287 ---~~~~~~~~~~~~~~~e~~~~~G~~~~~~~~~ng~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~~~~nv~~~~ 360 (464)
T 1h80_A 287 ---PTDEVHTRQSWKQAVESKLGRGCAQTPYARGNGGTRWAARVTQKDACLDKAKLEYGIEPGSFGTVKVFDVTARF 360 (464)
T ss_dssp ------------------------CCBCCC----------CEEBCSCHHHHHHHHHHTCCCCCBCSSEEEEEEEEEC
T ss_pred ---ccccccccceeccccccccccCceeEEEeccCCcccCceEEccccceeccccccccccCCceEEEEEEEEEecc
Confidence 111245667776655 2221 00245666664 33445667777777655
No 14
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=100.00 E-value=5.5e-35 Score=324.64 Aligned_cols=273 Identities=12% Similarity=0.124 Sum_probs=211.8
Q ss_pred cCCcEEEEcCCeEEEeeeeeeeccc---------CCceE-Eeee-ee-ecCCCCCCcccccCCcceeEEEeeeeceEEec
Q 040748 219 KDFAVIHVPYGFSFMIQSTIFTGPC---------QGSIV-FQVD-GT-IMPPDGPESWLQKNSKRQWLVFYKINELSLQG 286 (584)
Q Consensus 219 ~~g~~v~~p~G~tY~i~~~~ltgp~---------ksnvt-L~l~-Gt-L~~s~~~~~~~~~~~~~~lI~~~~~~NVtI~G 286 (584)
.++++||||+| +|++....+.+|| +++++ |+++ |. |++ +|.+.+++||+|+|
T Consensus 229 ~ggg~v~vP~G-~yl~~~~~~~gpc~~g~G~i~lkSnvt~L~L~~GA~l~g---------------~i~~~~~~nv~ItG 292 (574)
T 1ogo_X 229 GAKSILYFPPG-VYWMNQDQSGNSGKLGSNHIRLNSNTYWVYLAPGAYVKG---------------AIEYFTKQNFYATG 292 (574)
T ss_dssp CSSSEEEECSE-EEEECBCTTCCBSCSSSCCEECCTTCCEEEECTTEEEES---------------CEEECCSSCEEEES
T ss_pred CCCCEEEECCc-EEEEeccccCCcccccceEEEecCCCceEEecCCcEEEc---------------cEEEeCceeEEEEe
Confidence 35789999999 8998322222222 77777 7776 54 432 37888999999999
Q ss_pred CeEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCeeEEEE------eecCceEeeeeEecCCCceeeeeccccE--EEEe
Q 040748 287 GGTIDGRGHKWWDLPCKPHKGINGTTSPGPCDSPIALRFF------MSSNLTVQRLRIKDSPQFHFRFDNCKNV--HIES 358 (584)
Q Consensus 287 ~G~IDGnG~~ww~~~~~~~~g~~g~~~~g~~~rP~~I~f~------~s~nvtI~gvti~ns~~~~I~i~~s~nV--~I~n 358 (584)
.|+|||+|..||..... . .+.-..||++|.|. +|+|++|+|++++|+++|++++..|++| +|+|
T Consensus 293 ~GtIDG~G~~ww~~~~~-----~---~~~~~~rp~~i~~~~~~~~~~c~NV~I~Giti~NSp~w~i~~~~c~nV~~~I~n 364 (574)
T 1ogo_X 293 HGILSGENYVYQANAGD-----N---YIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQISD 364 (574)
T ss_dssp SCEEECTTSCTTCBTTT-----T---TBSCCCTTTBCCSEEECSCCSSEEEEEESCEEECCSSCSEEECSSSCEEEEEEE
T ss_pred CEEEeCCCccccccccc-----c---cccccCCcceEEEEeccccCCceeEEEECeEEECCCCcEEeecCCCChhhEEEe
Confidence 99999999999963211 0 00011478888877 9999999999999999999999999999 9999
Q ss_pred EEEECCCCCCCCCceeecCcccEEEEceEEecCCCcEEeCCCceeEEEEecccCCC--Cc-ceeeccCCCCCCCcEEeEE
Q 040748 359 IHITAPALSPNTDGIHIENTNGVEIYNSVISNGDDCVSIGSGCYDVDIRNITCGPG--HG-ISIGSLGNHNSRACVSNIT 435 (584)
Q Consensus 359 v~I~~~~~~~ntDGI~i~~S~nV~I~n~~i~~gDDgIai~sgs~NV~I~Nc~~~~g--~G-I~IGS~g~~~~~~~v~nI~ 435 (584)
+++.+... .++||||+. +||+|+||+|.++||||++++ +||+|+||+|+.+ +| |+|||. .+.++||+
T Consensus 365 v~i~~~~~-~nTDGIDi~--~NV~I~nc~I~~gDDcIaIks--~NI~I~nc~i~~g~g~g~IsIGS~-----~g~V~NV~ 434 (574)
T 1ogo_X 365 YKQVGAFF-FQTDGPEIY--PNSVVHDVFWHVNDDAIKIYY--SGASVSRATIWKCHNDPIIQMGWT-----SRDISGVT 434 (574)
T ss_dssp EEEECCCS-TTCCCCBCC--TTCEEEEEEEEESSCSEECCS--TTCEEEEEEEEECSSSCSEECCSS-----CCCEEEEE
T ss_pred eEeeCCCC-CCCccCccc--CCEEEEeeEEECCCCEEEECC--ccEEEEeEEEECCCCCceEEEcCC-----CCcEEEEE
Confidence 99987542 469999999 899999999999999999998 9999999998764 56 999983 57899999
Q ss_pred EEeeEEecCCc--------eEEEEee---------cCCCCeEEeEEEEceEEcCCcccEEEEEeecCCCCCCCCCCCeeE
Q 040748 436 VRDSVIKVSNN--------GVRIKTW---------QGGSGAVSGITFSNIHMNNVRNPIIIDQYYCLTKDCTNKTSAVYV 498 (584)
Q Consensus 436 I~Nit~~~s~~--------GI~Iks~---------~g~~G~V~NItf~NI~i~~v~~~I~I~~~y~~~~~~~~~~~~~~I 498 (584)
|+||+|.++.. +..|.+. ..+.| | ||+|+||+|+++.+++ |... +...|
T Consensus 435 v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g~g-V-NI~f~NI~~~~v~~~i-i~i~-----------p~~~I 500 (574)
T 1ogo_X 435 IDTLNVIHTRYIKSETVVPSAIIGASPFYASGMSPDSRKS-I-SMTVSNVVCEGLCPSL-FRIT-----------PLQNY 500 (574)
T ss_dssp EEEEEEEECCCSSCCTTTTCEEEEECCCSSSSCCCEEEEE-E-EEEEEEEEECSSBCEE-EEEC-----------CSEEE
T ss_pred EEeEEEECCcccceeccccceeeccccccccccccCCCce-E-EEEEEeEEEEceeEee-EEEC-----------CCCCE
Confidence 99999998653 3332211 11234 8 9999999999999885 4431 24679
Q ss_pred EeEEEEeEEEeec-----CCCCCeEEecCCCCceecEEEEeEEEEcC
Q 040748 499 SDILYSNIKGTYD-----IRSPPMHFACSDTVPCTNLTLSEVELLPA 540 (584)
Q Consensus 499 ~nItf~NI~gt~~-----~~~~~i~i~~~~~~~~~nItf~NI~i~~~ 540 (584)
+||+|+||+++.. ....+..+.+.+ .+|+||+|+||+|.++
T Consensus 501 ~nI~~~NI~i~g~~~~~~~~~~~~~i~G~~-~~v~nI~~~NV~i~g~ 546 (574)
T 1ogo_X 501 KNFVVKNVAFPDGLQTNSIGTGESIIPAAS-GLTMGLAISAWTIGGQ 546 (574)
T ss_dssp EEEEEEEEEETTCBCCSTTCTTCEEECCCT-TCCEEEEEEEEEETTE
T ss_pred EEEEEEeEEEeCccccccccccceeEecCC-CccceEEEEeEEEeCE
Confidence 9999999997651 111234566666 8899999999999765
No 15
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=100.00 E-value=1.2e-34 Score=320.27 Aligned_cols=301 Identities=19% Similarity=0.203 Sum_probs=219.6
Q ss_pred CceEEEecccccCCCCcchHHHHHHHHHHHhhcCCcEEEEcCCeEEEe-eeeeeecccCCceEEeeee----eecCCCCC
Q 040748 187 GNVIDVRKFGAVGDGISDDTEAFKMTWDSACQKDFAVIHVPYGFSFMI-QSTIFTGPCQGSIVFQVDG----TIMPPDGP 261 (584)
Q Consensus 187 ~~~~~v~~~GA~gdg~tDdT~Aiq~Ai~~a~~~~g~~v~~p~G~tY~i-~~~~ltgp~ksnvtL~l~G----tL~~s~~~ 261 (584)
..+++|++|||+|||.+|||+|||+||++ |++|+||+| +|++ +.+.| +++++|.+++ +|++..+.
T Consensus 20 ~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~~-----Gg~V~iP~G-tYlis~~l~l----~snv~L~g~g~~~t~L~~~~~~ 89 (609)
T 3gq8_A 20 QFGVSVKTYGAKGDGVTDDIRAFEKAIES-----GFPVYVPYG-TFMVSRGIKL----PSNTVLTGAGKRNAVIRFMDSV 89 (609)
T ss_dssp SSSEEGGGGTCCCEEEEECHHHHHHHHHT-----SSCEEECSE-EEEESSCEEE----CSSEEEEESCTTTEEEEECTTC
T ss_pred CcEEEeEecccCCCCCchhHHHHHHHHHc-----CCEEEECCc-cEEEeCceEE----CCCcEEEEeeCCCCEEEeCCCC
Confidence 47899999999999999999999999984 379999999 7999 77777 7899999875 57766544
Q ss_pred CcccccCCcceeEEEeeeeceEEecCeEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCeeEEEEeecCceEeeeeEecC
Q 040748 262 ESWLQKNSKRQWLVFYKINELSLQGGGTIDGRGHKWWDLPCKPHKGINGTTSPGPCDSPIALRFFMSSNLTVQRLRIKDS 341 (584)
Q Consensus 262 ~~~~~~~~~~~lI~~~~~~NVtI~G~G~IDGnG~~ww~~~~~~~~g~~g~~~~g~~~rP~~I~f~~s~nvtI~gvti~ns 341 (584)
..|.. ....|+.+.+.+||+|+|. +|||++..||.. ++. .+ ..||++|.|.+|+|++|++++++|+
T Consensus 90 p~~~~--li~~lI~a~~~~NItItG~-TIDGNG~~~g~~-~~~----~g------~~RP~lI~f~~c~NV~I~gVti~NS 155 (609)
T 3gq8_A 90 GRGES--LMYNENVTTGNENIFLSSF-TLDGNNKRLGQG-ISG----IG------GSRESNLSIRACHNVYIRDIEAVDC 155 (609)
T ss_dssp CSSCC--SEEESCTTTCCEEEEEEEE-EEECCGGGGCSS-CCC----SS------TTTTCSEEEESCEEEEEEEEEEESC
T ss_pred CCCCc--eeeeeeeecccccEEEEee-EEECCccccCcc-ccc----CC------CCCccEEEEEeeceEEEEeeEEEeC
Confidence 33321 1123456778999999996 999999844432 110 11 2689999999999999999999999
Q ss_pred CCceeeeeccccEEEEeEEEECCCCCCCCCceeecC------cccEEEEceEEe-cCCCcEEeCCCceeEEEEecccCC-
Q 040748 342 PQFHFRFDNCKNVHIESIHITAPALSPNTDGIHIEN------TNGVEIYNSVIS-NGDDCVSIGSGCYDVDIRNITCGP- 413 (584)
Q Consensus 342 ~~~~I~i~~s~nV~I~nv~I~~~~~~~ntDGI~i~~------S~nV~I~n~~i~-~gDDgIai~sgs~NV~I~Nc~~~~- 413 (584)
+.+++.+..+. . | ||+++++ |+||+|+||+|+ ++||||++++ ++||+|+||+|++
T Consensus 156 p~~gI~I~~~~-------------~--N-DGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIks-seNI~I~Nc~~~gp 218 (609)
T 3gq8_A 156 TLHGIDITCGG-------------L--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNCYSHDP 218 (609)
T ss_dssp SSCSEEEECSS-------------S--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESCEEECC
T ss_pred CCCCeEEeCCC-------------C--C-ccccCCCccccccceeEEEEeeEEEecCCCEEEecC-CeeEEEEeEEEECC
Confidence 98655444332 2 2 5666655 999999999995 6999999987 9999999999943
Q ss_pred -----CCcceeeccCCCCCCCcEEeEEEEeeEEecCCceEEEEeecCCCCeEEeEEEEc-eEEcCCc-ccEEEEEeecCC
Q 040748 414 -----GHGISIGSLGNHNSRACVSNITVRDSVIKVSNNGVRIKTWQGGSGAVSGITFSN-IHMNNVR-NPIIIDQYYCLT 486 (584)
Q Consensus 414 -----g~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~~GI~Iks~~g~~G~V~NItf~N-I~i~~v~-~~I~I~~~y~~~ 486 (584)
++||.||+. .+||+|+||++.++.+|++||++. +.+.++||+|+| +.++++. +.+...+.+..
T Consensus 219 ~G~S~~~GIsIGsg--------s~NVtV~Nc~i~nt~~GIrIKt~~-~~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a- 288 (609)
T 3gq8_A 219 RLTANCNGFEIDDG--------SRHVVLSNNRSKGCYGGIEIKAHG-DAPAAYNISINGHMSVEDVRSYNFRHIGHHAA- 288 (609)
T ss_dssp SSCSSCCSEEECTT--------CEEEEEESEEEESSSEEEEEEECT-TSCCCEEEEEEEEEEESCSEEEEEEETTSCST-
T ss_pred CCCCCcccEEccCC--------cccEEEEeeEEECCCCEEEEEecC-CCCccccEEEECCEeecCceEecceEEccccC-
Confidence 368998742 399999999999999999999854 457899999998 4665542 23332222211
Q ss_pred CCCCCCCCCeeEEeEEEEeEEEeecCCC--------C-CeEEe-------------cCC-----------CCceecEEEE
Q 040748 487 KDCTNKTSAVYVSDILYSNIKGTYDIRS--------P-PMHFA-------------CSD-----------TVPCTNLTLS 533 (584)
Q Consensus 487 ~~~~~~~~~~~I~nItf~NI~gt~~~~~--------~-~i~i~-------------~~~-----------~~~~~nItf~ 533 (584)
.........||+++|+........ + ++.+. +.+ ...++||+|.
T Consensus 289 ----~dp~s~~a~nV~l~n~~~~~p~~~~~~y~~~~~r~l~vs~~~~v~i~~~~~~~d~~y~~~~~~~~~q~~~~~~~l~ 364 (609)
T 3gq8_A 289 ----TAPQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLTGYTDDPNLLTETVVSVQFRARNCSLN 364 (609)
T ss_dssp ----TSCCCSSCEEEEEEEEEEESCCCTTCHHHHCCCEEEEEESCEEEEEEEEEEECSCTTSCCSEEEEEETTCEEEEEE
T ss_pred ----CCCCcceecceEeecceEEeecccCceeeCCCcceEEEEcCCCeEEcCceEccCCccccCCceEEEEEecceeEEc
Confidence 011233557788888775433211 1 11111 111 1357999999
Q ss_pred eEEEEcCCC
Q 040748 534 EVELLPAKG 542 (584)
Q Consensus 534 NI~i~~~~g 542 (584)
+|.|++.+.
T Consensus 365 ~~~i~gf~~ 373 (609)
T 3gq8_A 365 GVVLTGFSN 373 (609)
T ss_dssp EEEEESCTT
T ss_pred ceEEecccC
Confidence 999998774
No 16
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=100.00 E-value=2e-34 Score=322.89 Aligned_cols=302 Identities=20% Similarity=0.216 Sum_probs=218.2
Q ss_pred CceEEEecccccCCCCcchHHHHHHHHHHHhhcCCcEEEEcCCeEEEe-eeeeeecccCCceEEeeee----eecCCCCC
Q 040748 187 GNVIDVRKFGAVGDGISDDTEAFKMTWDSACQKDFAVIHVPYGFSFMI-QSTIFTGPCQGSIVFQVDG----TIMPPDGP 261 (584)
Q Consensus 187 ~~~~~v~~~GA~gdg~tDdT~Aiq~Ai~~a~~~~g~~v~~p~G~tY~i-~~~~ltgp~ksnvtL~l~G----tL~~s~~~ 261 (584)
..+++|++|||+|||.+|||+|||+||++ |++|+||+| +|++ +.+.| +++++|.+++ +|+++.+.
T Consensus 20 ~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~a-----Gg~V~IPaG-tYlisg~I~L----~snv~L~Geg~~~t~Lk~~~d~ 89 (772)
T 3gqn_A 20 QFGVSVKTYGAKGDGVTDDIRAFEKAIES-----GFPVYVPYG-TFMVSRGIKL----PSNTVLTGAGKRNAVIRFMDSV 89 (772)
T ss_dssp SSSEESGGGTCCCEEEEECHHHHHHHHHT-----TSCEEECSE-EEEESSCEEE----CSSCEEEEEEEEEEEEEECTTC
T ss_pred CcEEEeEecccCCCCChhHHHHHHHHHHc-----CCEEEECCc-cEEEEeEEEE----CCCcEEEEecCCCCEEEeCCCC
Confidence 47899999999999999999999999984 379999999 7999 77777 7899999875 56766554
Q ss_pred CcccccCCcceeEEEeeeeceEEecCeEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCeeEEEEeecCceEeeeeEecC
Q 040748 262 ESWLQKNSKRQWLVFYKINELSLQGGGTIDGRGHKWWDLPCKPHKGINGTTSPGPCDSPIALRFFMSSNLTVQRLRIKDS 341 (584)
Q Consensus 262 ~~~~~~~~~~~lI~~~~~~NVtI~G~G~IDGnG~~ww~~~~~~~~g~~g~~~~g~~~rP~~I~f~~s~nvtI~gvti~ns 341 (584)
..|.. ....|+.+.+++||+|+|. +|||++..||.. ++ ..+ ..||++|.|.+|+|++|++++++|+
T Consensus 90 p~~~~--li~~lI~a~gveNItItG~-TIDGNG~~~g~~-~~----~~g------~~RP~lI~f~~ckNV~I~gVti~NS 155 (772)
T 3gqn_A 90 GRGES--LMYNENVTTGNENIFLSSF-TLDGNNKRLGQG-IS----GIG------GSRESNLSIRACHNVYIRDIEAVDC 155 (772)
T ss_dssp CSSCC--SEEESCTTTCCEEEEEEEE-EEECCGGGGCSS-CC----CSS------TTTTCSEEEESCEEEEEEEEEEESC
T ss_pred CCCCc--eeeeeeeccCceeEEEEee-EEeCCccccCcc-cc----cCC------CCCccEEEEEeeceEEEEeEEEEeC
Confidence 33321 1124556788999999995 999999844321 11 011 2689999999999999999999999
Q ss_pred CCceeeeeccccEEEEeEEEECCCCCCCCCceeecC------cccEEEEceEEe-cCCCcEEeCCCceeEEEEecccCC-
Q 040748 342 PQFHFRFDNCKNVHIESIHITAPALSPNTDGIHIEN------TNGVEIYNSVIS-NGDDCVSIGSGCYDVDIRNITCGP- 413 (584)
Q Consensus 342 ~~~~I~i~~s~nV~I~nv~I~~~~~~~ntDGI~i~~------S~nV~I~n~~i~-~gDDgIai~sgs~NV~I~Nc~~~~- 413 (584)
+.+++.+ .++.. | ||+++++ |+||+|+||+|+ ++||||++++ ++||+|+||+|++
T Consensus 156 p~~gI~I-------------~np~~--N-DGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIks-SeNI~I~Nc~c~gp 218 (772)
T 3gqn_A 156 TLHGIDI-------------TCGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNCYSHDP 218 (772)
T ss_dssp SSCSEEE-------------ECSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESCEEECC
T ss_pred CCCCEEE-------------eCCCc--C-CcCCCcCcccccccceEEEEeeEEEecCcCeEEecC-CceEEEEeEEEECC
Confidence 9855443 33322 2 5666655 999999999995 5999999987 9999999999943
Q ss_pred -----CCcceeeccCCCCCCCcEEeEEEEeeEEecCCceEEEEeecCCCCeEEeEEEEc-eEEcCCc-ccEEEEEeecCC
Q 040748 414 -----GHGISIGSLGNHNSRACVSNITVRDSVIKVSNNGVRIKTWQGGSGAVSGITFSN-IHMNNVR-NPIIIDQYYCLT 486 (584)
Q Consensus 414 -----g~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~~GI~Iks~~g~~G~V~NItf~N-I~i~~v~-~~I~I~~~y~~~ 486 (584)
++||.||+. .+||+|+||+|.++.+|++||++ ++.+.++||+|.| +.++++. +.+...+.+..
T Consensus 219 hG~S~~~GIsIGsg--------s~NVtV~Nc~~~nT~nGIRIKt~-~~gg~v~NV~I~gnis~~dvrsynir~iG~h~a- 288 (772)
T 3gqn_A 219 RLTANCNGFEIDDG--------SRHVVLSNNRSKGCYGGIEIKAH-GDAPAAYNISINGHMSVEDVRSYNFRHIGHHAA- 288 (772)
T ss_dssp SSSSSCCSEEECTT--------CEEEEEEEEEEESSSEEEEECCC-TTSCCCEEEEEEEEEEESCSEEEEECCTTSCSS-
T ss_pred CCCCCcccEEecCC--------cccEEEEceEEECCCcEEEEEEe-CCCCccccEEEECCEEeccCeEecceEEccccC-
Confidence 378999752 39999999999999999999975 4567899999985 7776642 22221111110
Q ss_pred CCCCCCCCCeeEEeEEEEeEEEeecCCC--------C-CeEEec-------------CC-----------CCceecEEEE
Q 040748 487 KDCTNKTSAVYVSDILYSNIKGTYDIRS--------P-PMHFAC-------------SD-----------TVPCTNLTLS 533 (584)
Q Consensus 487 ~~~~~~~~~~~I~nItf~NI~gt~~~~~--------~-~i~i~~-------------~~-----------~~~~~nItf~ 533 (584)
.........||.++|+........ + ++.+.+ .+ ...++||+|.
T Consensus 289 ----~dp~s~~a~nV~l~n~~~~~P~~~~~ly~~~~praL~vsay~~v~i~~~~~igd~~y~~~~~~i~~q~~~~~~~ln 364 (772)
T 3gqn_A 289 ----TAPQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLTGYTDDPNLLTETVVSVQFRARNCSLN 364 (772)
T ss_dssp ----SSCCCSSCEEEEEEEEEEESCCCSSCHHHHCCCEEEEEESCEEEEEEEEEEECSCTTSCCSEEEEEETTCEEEEEE
T ss_pred ----CCCCCccCccEEeecceEEcccccCceeeCCCcceEEEEcCCCcEecCceeccCcccccCCceEEEEEecceeEEc
Confidence 011222557777777764432111 1 111111 11 1357999999
Q ss_pred eEEEEcCCCC
Q 040748 534 EVELLPAKGD 543 (584)
Q Consensus 534 NI~i~~~~g~ 543 (584)
+|.|++.+..
T Consensus 365 ~i~i~gf~~a 374 (772)
T 3gqn_A 365 GVVLTGFSNS 374 (772)
T ss_dssp EEEEESCTTC
T ss_pred ceEEecccCC
Confidence 9999987753
No 17
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.96 E-value=2.5e-28 Score=258.62 Aligned_cols=192 Identities=20% Similarity=0.341 Sum_probs=137.8
Q ss_pred eEEEecccccCCCCcchHHHHHHHHHHHhhcCCcEEEEcCCeEEEee--------eeeeecccCCceEEeeee----eec
Q 040748 189 VIDVRKFGAVGDGISDDTEAFKMTWDSACQKDFAVIHVPYGFSFMIQ--------STIFTGPCQGSIVFQVDG----TIM 256 (584)
Q Consensus 189 ~~~v~~~GA~gdg~tDdT~Aiq~Ai~~a~~~~g~~v~~p~G~tY~i~--------~~~ltgp~ksnvtL~l~G----tL~ 256 (584)
+++|++|||+|||.+|||+|||+||++|++.++++|+||+| +|++. .+.+ +++++|+++| +|+
T Consensus 2 ~~~v~~~ga~~dg~~ddt~aiq~Ai~~a~~~gg~~v~~p~G-~y~~~~~~~~~~g~l~~----~~~v~l~g~g~~~t~l~ 76 (377)
T 2pyg_A 2 DYNVKDFGALGDGVSDDRASIQAAIDAAYAAGGGTVYLPAG-EYRVSAAGEPGDGCLML----KDGVYLAGAGMGETVIK 76 (377)
T ss_dssp CEEGGGGTCCCEEEEECHHHHHHHHHHHHHTTSEEEEECSE-EEEECCCSSGGGCSEEC----CTTEEEEESSBTTEEEE
T ss_pred EeeeeecCCCCCCCcchHHHHHHHHHHHHhcCCCEEEECCe-EEEEcccccCCcccEEe----cCCeEEEEcCCCCcEEE
Confidence 68999999999999999999999999988767899999999 79996 4555 8999999985 355
Q ss_pred CCCCCCccccc----CCcceeEEEeeeeceEEecC-----eEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCeeEEEEe
Q 040748 257 PPDGPESWLQK----NSKRQWLVFYKINELSLQGG-----GTIDGRGHKWWDLPCKPHKGINGTTSPGPCDSPIALRFFM 327 (584)
Q Consensus 257 ~s~~~~~~~~~----~~~~~lI~~~~~~NVtI~G~-----G~IDGnG~~ww~~~~~~~~g~~g~~~~g~~~rP~~I~f~~ 327 (584)
+..+...++.. ..... ..+..+++++|.|. |++|| ||.... + ..+..
T Consensus 77 ~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~I~G~~~~~~G~idG----w~~~~~-----------------~--~~~~~ 132 (377)
T 2pyg_A 77 LIDGSDQKITGMVRSAYGEE-TSNFGMRDLTLDGNRDNTSGKVDG----WFNGYI-----------------P--GGDGA 132 (377)
T ss_dssp ECTTCBSCEEEEEECCTTSC-CEEEEEEEEEEECCGGGCBSCEEE----EEECSC-----------------T--TSSCC
T ss_pred ecCCCccCccceEeccCCCc-ceEEEEEEEEEECCCccCCccccc----eecccC-----------------c--ccccc
Confidence 55443332210 00011 13457899999997 88887 886421 1 01246
Q ss_pred ecCceEeeeeEecCCCceeeeeccc-cEEEEeEEEECCCCCCCCCceeecCcccEEEEceE-EecCCCcEEeCCCceeEE
Q 040748 328 SSNLTVQRLRIKDSPQFHFRFDNCK-NVHIESIHITAPALSPNTDGIHIENTNGVEIYNSV-ISNGDDCVSIGSGCYDVD 405 (584)
Q Consensus 328 s~nvtI~gvti~ns~~~~I~i~~s~-nV~I~nv~I~~~~~~~ntDGI~i~~S~nV~I~n~~-i~~gDDgIai~sgs~NV~ 405 (584)
|++++|+++++++++.|+|++..|. ++.++|+.+.. ...|||.++.|++++|++|+ +...+|||.+..++++++
T Consensus 133 ~~nv~I~~~~i~n~~~~gi~~~~~~~~~~i~n~~~~~----~~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~ 208 (377)
T 2pyg_A 133 DRDVTIERVEVREMSGYGFDPHEQTINLTIRDSVAHD----NGLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFV 208 (377)
T ss_dssp EEEEEEEEEEEECCSSCSEEECSSEEEEEEESCEEES----CSSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEE
T ss_pred ccceEEEeEEEEecccceEEeecccCCeEEEeEEeec----CCCCceeEeccCCcEEECcEEEccccCcEEEEeccCCeE
Confidence 9999999999999999999998876 67888887755 34566666666666666663 344556666544456666
Q ss_pred EEecccCC
Q 040748 406 IRNITCGP 413 (584)
Q Consensus 406 I~Nc~~~~ 413 (584)
|+||++..
T Consensus 209 I~nN~i~~ 216 (377)
T 2pyg_A 209 MTNNVAYG 216 (377)
T ss_dssp EESCEEES
T ss_pred EECCEEEC
Confidence 66666654
No 18
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=99.95 E-value=3.6e-28 Score=255.81 Aligned_cols=226 Identities=15% Similarity=0.170 Sum_probs=164.6
Q ss_pred CceEEEecccccCCCCcchHHHHHHHHHHHhhc-CCcEEEEcCCe---EEEeee-eeeecccCCceEEeeee--eecCCC
Q 040748 187 GNVIDVRKFGAVGDGISDDTEAFKMTWDSACQK-DFAVIHVPYGF---SFMIQS-TIFTGPCQGSIVFQVDG--TIMPPD 259 (584)
Q Consensus 187 ~~~~~v~~~GA~gdg~tDdT~Aiq~Ai~~a~~~-~g~~v~~p~G~---tY~i~~-~~ltgp~ksnvtL~l~G--tL~~s~ 259 (584)
+.++||++|||+|||.||||+|||+||++||+. +|++||||+|. +|+++. +.| +++++|.+++ +|+++.
T Consensus 49 s~~~NVkDFGAkGDGvTDDTaAIQkAIdaA~a~~GGGtVyVPaG~~~~tYlvt~tI~L----kSnV~L~Ge~~AtIl~s~ 124 (514)
T 2vbk_A 49 KEAISILDFGVIDDGVTDNYQAIQNAIDAVASLPSGGELFIPASNQAVGYIVGSTLLI----PGGVNIRGVGKASQLRAK 124 (514)
T ss_dssp TTCCBGGGGCCCCSSSSCCHHHHHHHHHHHHTSTTCEEEECCCCSSTTCEEESSCEEE----CTTEEEECCSTTSEEEEC
T ss_pred CcEEEeeccCcCCCCCcccHHHHHHHHHHHhhcCCCeEEEECCCCcceeEEECCeEEe----cCCeEEEEecCceEeecc
Confidence 478999999999999999999999999998876 58899999994 588875 445 7999999873 343211
Q ss_pred C--CCcccccCCcceeEEEeeeeceEEecCeEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCeeEEEEeecCceEeeee
Q 040748 260 G--PESWLQKNSKRQWLVFYKINELSLQGGGTIDGRGHKWWDLPCKPHKGINGTTSPGPCDSPIALRFFMSSNLTVQRLR 337 (584)
Q Consensus 260 ~--~~~~~~~~~~~~lI~~~~~~NVtI~G~G~IDGnG~~ww~~~~~~~~g~~g~~~~g~~~rP~~I~f~~s~nvtI~gvt 337 (584)
. ...+... ...+++.+.+++||+|+|.|+|||++..|+... .. .|. +....+++|.|++++
T Consensus 125 ~~I~GtIia~-~y~s~I~~~~VeNIaITG~GTIDG~g~n~t~e~---------~~-----~Rq--~~~~~fdnV~Vn~Vt 187 (514)
T 2vbk_A 125 SGLTGSVLRL-SYDSDTIGRYLRNIRVTGNNTCNGIDTNITAED---------SV-----IRQ--VYGWVFDNVMVNEVE 187 (514)
T ss_dssp TTCCSEEEEE-CCCSCCSCEEEESCEEECCSSSEEEEESCCTTC---------SS-----CCC--EESEEEESCEEEEEE
T ss_pred ccccccEEec-cCCccccccCceEEEEECCCeEeCCCCCccccc---------ee-----eec--cceEEeeeEEEEeEE
Confidence 0 0111111 123467788899999999999999875542211 00 222 222236799999996
Q ss_pred E--ecCCCceeeeeccccEEEE-eEEEECCCCCCCCCceeecCcccEEEEceEEecCCCcEEeCCCceeEEEEecccCC-
Q 040748 338 I--KDSPQFHFRFDNCKNVHIE-SIHITAPALSPNTDGIHIENTNGVEIYNSVISNGDDCVSIGSGCYDVDIRNITCGP- 413 (584)
Q Consensus 338 i--~ns~~~~I~i~~s~nV~I~-nv~I~~~~~~~ntDGI~i~~S~nV~I~n~~i~~gDDgIai~sgs~NV~I~Nc~~~~- 413 (584)
. .+++.|.+++..|++++++ ++++. .+|+||+|.||.|..|||||++|++ .+.+-.-+-+.
T Consensus 188 ~~v~~Sg~WTIhPi~Cqnvt~r~gL~f~-------------eSCrNV~IsnC~FsVGDdciaiksG--k~~~~~~~~~~s 252 (514)
T 2vbk_A 188 TAYLMQGLWHSKFIACQAGTCRVGLHFL-------------GQCVSVSVSSCHFSRGNYSADESFG--IRIQPQTYAWSS 252 (514)
T ss_dssp EEEEEESEEEEEEESCEEEEEEEEEEEE-------------SCCEEEEEESCEEECTTSCCTTCEE--EEEECBCCTTTS
T ss_pred EeEeccCcEEEeEeccCceecccCcccc-------------CCCCeEEEeccEEecCcceeeeecC--ceecccccCCcc
Confidence 4 4788999999999999987 66664 2799999999999999999999984 22221111111
Q ss_pred ---CCc-ceeeccCCCCCCCcEEe-EEEEeeEEecCCceEEEEe
Q 040748 414 ---GHG-ISIGSLGNHNSRACVSN-ITVRDSVIKVSNNGVRIKT 452 (584)
Q Consensus 414 ---g~G-I~IGS~g~~~~~~~v~n-I~I~Nit~~~s~~GI~Iks 452 (584)
-|| |-||||.+ .+++.| |+|++|.|.+++ -+.+..
T Consensus 253 e~~~hgav~igSE~m---~~Gvk~~v~v~~Clf~~td-~~~~~~ 292 (514)
T 2vbk_A 253 EAVRSEAIILDSETM---CIGFKNAVYVHDCLDLHME-QLDLDY 292 (514)
T ss_dssp SCBCCEEEEEESSEE---EESCSEEEEESCCEEEEEE-SEEEEE
T ss_pred hhcccccEEECchhh---cccccccEEEEeeeccCCc-cccccc
Confidence 176 99999932 568999 999999999875 444443
No 19
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=99.90 E-value=1.1e-22 Score=220.88 Aligned_cols=230 Identities=17% Similarity=0.226 Sum_probs=181.7
Q ss_pred cceeEEEeeeeceEEecCeEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCeeEEEEeecCceEeeeeEecC--CCceee
Q 040748 270 KRQWLVFYKINELSLQGGGTIDGRGHKWWDLPCKPHKGINGTTSPGPCDSPIALRFFMSSNLTVQRLRIKDS--PQFHFR 347 (584)
Q Consensus 270 ~~~lI~~~~~~NVtI~G~G~IDGnG~~ww~~~~~~~~g~~g~~~~g~~~rP~~I~f~~s~nvtI~gvti~ns--~~~~I~ 347 (584)
++.+|.+.+++|++|+|..+++.. .| .+++..|+|++|++++|.+. ...+|+
T Consensus 189 RP~~i~~~~~~nv~i~giti~nsp---~~-----------------------~i~~~~~~nv~i~~v~I~~~~~NtDGid 242 (448)
T 3jur_A 189 RPSFVQFYRCRNVLVEGVKIINSP---MW-----------------------CIHPVLSENVIIRNIEISSTGPNNDGID 242 (448)
T ss_dssp CCCSEEEESCEEEEEESCEEESCS---SC-----------------------SEEEESCEEEEEESCEEEECSTTCCSBC
T ss_pred CceEEEEEcccceEEEeeEEEeCC---Cc-----------------------eEeeeccCCEEEEeEEEeeccCCCcccc
Confidence 466899999999999997666432 22 47899999999999999985 345799
Q ss_pred eeccccEEEEeEEEECCCC------CCCCCceeec-CcccEEEEceEE--ecCCCcEEeCCC----ceeEEEEecccCCC
Q 040748 348 FDNCKNVHIESIHITAPAL------SPNTDGIHIE-NTNGVEIYNSVI--SNGDDCVSIGSG----CYDVDIRNITCGPG 414 (584)
Q Consensus 348 i~~s~nV~I~nv~I~~~~~------~~ntDGI~i~-~S~nV~I~n~~i--~~gDDgIai~sg----s~NV~I~Nc~~~~g 414 (584)
+..|+||+|+|++|.+.++ ..+.||+++. .|+||+|+||++ ..+++||++++. .+||+|+||+|.++
T Consensus 243 i~~s~nV~I~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV~v~n~~~~~t 322 (448)
T 3jur_A 243 PESCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNNVYMNV 322 (448)
T ss_dssp CBSCEEEEEESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTCEEEEEEESCEEESC
T ss_pred ccCCcCEEEEeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcccCcEEEEEEEEEEEecc
Confidence 9999999999999998543 1233444443 289999999999 456669999874 59999999999876
Q ss_pred -CcceeeccCCCCCCCcEEeEEEEeeEEecCCceE-EEEeecC-----CCCeEEeEEEEceEEcCCcccEEEEEeecCCC
Q 040748 415 -HGISIGSLGNHNSRACVSNITVRDSVIKVSNNGV-RIKTWQG-----GSGAVSGITFSNIHMNNVRNPIIIDQYYCLTK 487 (584)
Q Consensus 415 -~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~~GI-~Iks~~g-----~~G~V~NItf~NI~i~~v~~~I~I~~~y~~~~ 487 (584)
+|+.|++... ..+.++||+|+|++|.+..+++ .|+.... ..+.|+||+|+||+.++...++.|...
T Consensus 323 ~~GirIKt~~g--~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~~~~~~~i~nI~~~NI~~t~~~~~i~i~g~----- 395 (448)
T 3jur_A 323 ERALRLKTNSR--RGGYMENIFFIDNVAVNVSEEVIRINLRYDNEEGEYLPVVRSVFVKNLKATGGKYAVRIEGL----- 395 (448)
T ss_dssp SEEEEEECCTT--TCSEEEEEEEESCEEEEESSEEEEEESCGGGCCCSCCCEEEEEEEESCEEEECSEEEEEECB-----
T ss_pred cceEEEEEEcC--CCceEeeEEEEEEEEECCccccEEEEeeccCCCCCCCceEEEEEEEeEEEEecceEEEEEeC-----
Confidence 7999998643 4589999999999999998887 8877532 346899999999999887778887532
Q ss_pred CCCCCCCCeeEEeEEEEeEEEeecCCCCCeEEec----CCCCceecEEEEeEEEEcC
Q 040748 488 DCTNKTSAVYVSDILYSNIKGTYDIRSPPMHFAC----SDTVPCTNLTLSEVELLPA 540 (584)
Q Consensus 488 ~~~~~~~~~~I~nItf~NI~gt~~~~~~~i~i~~----~~~~~~~nItf~NI~i~~~ 540 (584)
+...++||+|+||+++.... +..+.. .....++||+|+||+|.++
T Consensus 396 ------~~~p~~~I~~~nv~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~nv~ing~ 444 (448)
T 3jur_A 396 ------ENDYVKDILISDTIIEGAKI--SVLLEFGQLGMENVIMNGSRFEKLYIEGK 444 (448)
T ss_dssp ------TTBCEEEEEEEEEEEESCSE--EEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred ------CCCCEeeEEEEEEEEEcccc--ceeEeccccccccceecccEEEEEEEcCE
Confidence 34589999999999987633 333432 2345589999999999875
No 20
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.87 E-value=2.4e-21 Score=217.60 Aligned_cols=263 Identities=16% Similarity=0.208 Sum_probs=186.1
Q ss_pred CceEEEecccccCCCCcchHHHHHHHHHHHhhcCC---------cEEEEcCCeEEEeee-eeeecccCCceEEeeee---
Q 040748 187 GNVIDVRKFGAVGDGISDDTEAFKMTWDSACQKDF---------AVIHVPYGFSFMIQS-TIFTGPCQGSIVFQVDG--- 253 (584)
Q Consensus 187 ~~~~~v~~~GA~gdg~tDdT~Aiq~Ai~~a~~~~g---------~~v~~p~G~tY~i~~-~~ltgp~ksnvtL~l~G--- 253 (584)
+.++||++|||+|||++|||+|||+||+++...++ ++||||+| +|+++. +.+ ++++.|.+++
T Consensus 47 ~v~~nV~dfGA~GDG~tDDT~Aiq~Ai~~a~~~Gggc~~st~~~~~V~~P~G-tYlvs~tI~l----~~~t~L~G~~~~~ 121 (758)
T 3eqn_A 47 PVFRNVKNYGAKGDGNTDDTAAIQAAINAGGRCGQGCDSTTTQPALVYFPPG-TYKVSSPLVV----LYQTQLIGDAKNL 121 (758)
T ss_dssp CSEEEGGGGTCCCEEEEECHHHHHHHHHTTSCSCTTCCCCSSSCEEEEECSS-EEEESSCEEC----CTTEEEEECSSSC
T ss_pred eEEEEHHHcCcCCCCCchhHHHHHHHHHHhhhcccccccccccceEEEECCc-eEEEcccEEc----cCCeEEEecCCCC
Confidence 57999999999999999999999999997643222 69999999 899985 555 7899999884
Q ss_pred -eecCCCCCCcccccCCcceeEEEeeeeceEEecCeEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCeeEEEEeecCce
Q 040748 254 -TIMPPDGPESWLQKNSKRQWLVFYKINELSLQGGGTIDGRGHKWWDLPCKPHKGINGTTSPGPCDSPIALRFFMSSNLT 332 (584)
Q Consensus 254 -tL~~s~~~~~~~~~~~~~~lI~~~~~~NVtI~G~G~IDGnG~~ww~~~~~~~~g~~g~~~~g~~~rP~~I~f~~s~nvt 332 (584)
+|++..+ |.. .. .|.+ ...+++|..||.. ....+..++|++
T Consensus 122 pvIka~~~---F~G----~~----------li~~-d~y~~~G~~w~~~--------------------~~~F~r~irNlv 163 (758)
T 3eqn_A 122 PTLLAAPN---FSG----IA----------LIDA-DPYLAGGAQYYVN--------------------QNNFFRSVRNFV 163 (758)
T ss_dssp CEEEECTT---CCS----SC----------SEES-SCBCGGGCBSSCG--------------------GGCCCEEEEEEE
T ss_pred CeEecCCC---CCC----cc----------eeec-cccCCCCcccccc--------------------ccceeeeecceE
Confidence 4555432 111 01 1233 2334566778742 123566788888
Q ss_pred EeeeeEecCCCceeeeeccccEEEEeEEEECCCCC-CCCCceeecCcccEEEEceEEecCCCcEEeCCCceeEEEEeccc
Q 040748 333 VQRLRIKDSPQFHFRFDNCKNVHIESIHITAPALS-PNTDGIHIENTNGVEIYNSVISNGDDCVSIGSGCYDVDIRNITC 411 (584)
Q Consensus 333 I~gvti~ns~~~~I~i~~s~nV~I~nv~I~~~~~~-~ntDGI~i~~S~nV~I~n~~i~~gDDgIai~sgs~NV~I~Nc~~ 411 (584)
|+ ++..+....+|++..|+++.|+||+|..+... ...+||++.++..+.|+|++|..|+-|+.++. +..+++|.+|
T Consensus 164 iD-~t~~~~~~~gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~Dl~f~GG~~G~~~gn--QQfT~rnltF 240 (758)
T 3eqn_A 164 ID-LRQVSGSATGIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVFNGGNIGATFGN--QQFTVRNLTF 240 (758)
T ss_dssp EE-CTTCSSCEEEEECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEEEEEEEESCSEEEEEEC--SCCEEEEEEE
T ss_pred Ee-ccccCCCceEEEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEEEeeEEeCCceEEEcCC--cceEEeccEE
Confidence 88 66666678899999999999999999997654 34899999988899999999999998888854 4555555555
Q ss_pred CCC-CcceeeccCCCCCCCcEEeEEEEeeEEecCCceEEEEeecC---CCCeEEeEEEEceEEcCCcccEEEEEeecCCC
Q 040748 412 GPG-HGISIGSLGNHNSRACVSNITVRDSVIKVSNNGVRIKTWQG---GSGAVSGITFSNIHMNNVRNPIIIDQYYCLTK 487 (584)
Q Consensus 412 ~~g-~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~~GI~Iks~~g---~~G~V~NItf~NI~i~~v~~~I~I~~~y~~~~ 487 (584)
.++ .+|.+.- --.+++.+++|.++..||.+..... ....+--|++.|.+++++..+|.. .+....
T Consensus 241 ~~~~taI~~~w---------~wgwt~~~~~i~nc~vGi~~~~g~~~~~~~q~vGsv~l~Ds~~~n~~~~i~t--~~~~~~ 309 (758)
T 3eqn_A 241 NNANTAINAIW---------NWGWTFQRITINNCQVGFDLTQGGTSNTGAQGVGAEAIIDAVVTNTQTFVRW--SGASSG 309 (758)
T ss_dssp ESCSEEEEEEE---------BSCEEEEEEEEESCSEEEEECCCCSSTTSCCCBCEEEEEEEEEESCSEEEEE--SSCCCS
T ss_pred eChHHHHhhhc---------CceEEEEEeEEECCCccEEEcCCCCCcccCcceeeEEEEEeeEEcccceEEe--ccCCCC
Confidence 544 3555421 1246788888888888888865211 123467789999999988755433 222111
Q ss_pred CCCCCCCCeeEEeEEEEeEEEe
Q 040748 488 DCTNKTSAVYVSDILYSNIKGT 509 (584)
Q Consensus 488 ~~~~~~~~~~I~nItf~NI~gt 509 (584)
.......|+||.|+|+...
T Consensus 310 ---~~~~slvleNv~~~nv~~~ 328 (758)
T 3eqn_A 310 ---HLQGSLVLNNIQLTNVPVA 328 (758)
T ss_dssp ---SCSSEEEEEEEEEEEEEEE
T ss_pred ---CCcceEEEEeEEeeCCCeE
Confidence 1123577888888887543
No 21
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=99.86 E-value=4.1e-20 Score=207.96 Aligned_cols=246 Identities=13% Similarity=0.116 Sum_probs=197.6
Q ss_pred cceeEEEeeeeceEEecCeEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCeeEEEEeecCceEeeeeEec--CC-Ccee
Q 040748 270 KRQWLVFYKINELSLQGGGTIDGRGHKWWDLPCKPHKGINGTTSPGPCDSPIALRFFMSSNLTVQRLRIKD--SP-QFHF 346 (584)
Q Consensus 270 ~~~lI~~~~~~NVtI~G~G~IDGnG~~ww~~~~~~~~g~~g~~~~g~~~rP~~I~f~~s~nvtI~gvti~n--s~-~~~I 346 (584)
++.+|.+.+++||+|+|..+.+.. +| .+.+.+|+|++|+++++.+ ++ ..+|
T Consensus 330 rP~~i~~~~~~nv~I~giti~ns~---~~-----------------------~i~~~~~~nv~i~~v~i~~~~~~NtDGi 383 (608)
T 2uvf_A 330 RSSLMTLRGVENVYLAGFTVRNPA---FH-----------------------GIMNLENHNVVANGLIHQTYDANNGDGI 383 (608)
T ss_dssp SCCSEEEESEEEEEEESCEEECCS---SC-----------------------SEEEESCEEEEEESCEEECTTCTTCCSE
T ss_pred CCeEEEEEeeeeEEEeCcEEecCC---CC-----------------------EEEEecCCCEEEeeEEEcCCCCCCCCeE
Confidence 567899999999999997665422 22 4789999999999999875 22 4579
Q ss_pred eeeccccEEEEeEEEECCCCC------CCCCceeecCcccEEEEceEEecCCCcEEeCCC----ceeEEEEecccCCC-C
Q 040748 347 RFDNCKNVHIESIHITAPALS------PNTDGIHIENTNGVEIYNSVISNGDDCVSIGSG----CYDVDIRNITCGPG-H 415 (584)
Q Consensus 347 ~i~~s~nV~I~nv~I~~~~~~------~ntDGI~i~~S~nV~I~n~~i~~gDDgIai~sg----s~NV~I~Nc~~~~g-~ 415 (584)
++..|+||+|+|++|.+.+++ .+.||++...|+||+|+||++..+++++++++. .+||+|+||+|.++ +
T Consensus 384 di~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~~~~~v~nI~v~n~~~~~t~~ 463 (608)
T 2uvf_A 384 EFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIEDILAENNVMYLTDI 463 (608)
T ss_dssp EEESCEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESCCTTCEEEEEEESCEEESCSE
T ss_pred EecCCceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEcccCCCCEEEEEEEeEEEECCCc
Confidence 999999999999999987652 456777767899999999999999999888763 59999999999987 7
Q ss_pred cceeeccCCCCCCCcEEeEEEEeeEEecC-CceEEEEeecC------------CCCeEEeEEEEceEEcCCc---ccEEE
Q 040748 416 GISIGSLGNHNSRACVSNITVRDSVIKVS-NNGVRIKTWQG------------GSGAVSGITFSNIHMNNVR---NPIII 479 (584)
Q Consensus 416 GI~IGS~g~~~~~~~v~nI~I~Nit~~~s-~~GI~Iks~~g------------~~G~V~NItf~NI~i~~v~---~~I~I 479 (584)
||.|++... +.+.++||+|+|++|.+. .++|.|+.... ..+.+++|+|+||+++++. .++.|
T Consensus 464 GirIKt~~g--~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~~i~i 541 (608)
T 2uvf_A 464 GLRAKSTST--IGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNPSIEI 541 (608)
T ss_dssp EEEEEEETT--TCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSCSEEE
T ss_pred eEEEeeecC--CCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEEeEEE
Confidence 999998643 457899999999999998 58999987643 2356999999999998875 47777
Q ss_pred EEeecCCCCCCCCCCCeeEEeEEEEeEEEeecCCCCCeEEecCCCCceecEEEEeEEEEcCCCCccccceeecceecCC-
Q 040748 480 DQYYCLTKDCTNKTSAVYVSDILYSNIKGTYDIRSPPMHFACSDTVPCTNLTLSEVELLPAKGDLVSDPFCWNAYGDLP- 558 (584)
Q Consensus 480 ~~~y~~~~~~~~~~~~~~I~nItf~NI~gt~~~~~~~i~i~~~~~~~~~nItf~NI~i~~~~g~~~~~~~c~nv~G~~~- 558 (584)
... | .....++||+|+||+++... +..+. .|+|++|+||.|+...+. ..+.|.++.|..+
T Consensus 542 ~g~-~--------~~~~p~~ni~~~nv~i~~~~---~~~i~-----~~~~~~~~nv~i~~~~~~--~~~~~~~v~~~~~~ 602 (608)
T 2uvf_A 542 KGD-T--------ANKAWHRLVHVNNVQLNNVT---PTAIS-----DLRDSEFNKVTFTELRGD--TPWHFSEVKNVKVD 602 (608)
T ss_dssp ECB-G--------GGTBCEEEEEEEEEEEESCC---CCEEE-----SEESCEEEEEEEESCSSS--CSCCEESCBSCCBT
T ss_pred EEE-c--------CCCCccccEEEEeEEEEccC---ceeEE-----eccCceEEeEEEeCCCCC--ccEEEEeeeceEEc
Confidence 653 2 13457899999999998763 34454 389999999999977642 2489999999876
Q ss_pred cccc
Q 040748 559 TLTI 562 (584)
Q Consensus 559 ~~t~ 562 (584)
+++.
T Consensus 603 ~v~~ 606 (608)
T 2uvf_A 603 GKPV 606 (608)
T ss_dssp TCCC
T ss_pred ceEe
Confidence 4443
No 22
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.83 E-value=2.8e-19 Score=189.40 Aligned_cols=203 Identities=18% Similarity=0.190 Sum_probs=159.8
Q ss_pred eEEEEeecCceEee---eeEecC--CCc------------eeeeeccccEEEEeEEEECCCCCCCCCceeecCcccEEEE
Q 040748 322 ALRFFMSSNLTVQR---LRIKDS--PQF------------HFRFDNCKNVHIESIHITAPALSPNTDGIHIENTNGVEIY 384 (584)
Q Consensus 322 ~I~f~~s~nvtI~g---vti~ns--~~~------------~I~i~~s~nV~I~nv~I~~~~~~~ntDGI~i~~S~nV~I~ 384 (584)
+|.+ +.+||+|.| -+|... .+| .+++..|+|++|+++++.+++.+ +|++. |++|+|+
T Consensus 89 ~i~~-~~~nv~I~G~~~g~IdG~G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~nsp~~----~i~i~-~~nv~i~ 162 (362)
T 1czf_A 89 LISM-SGEHITVTGASGHLINCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNTPLM----AFSVQ-ANDITFT 162 (362)
T ss_dssp SEEE-EEESCEEEECTTCEEECCGGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECCSSC----CEEEE-CSSEEEE
T ss_pred EEEE-eCccEEEEcCCCcEEECCCchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecCCcc----EEEEe-eCCEEEE
Confidence 4666 559999999 455332 233 38999999999999999998765 69999 9999999
Q ss_pred ceEEec---------CCCcEEeCCCceeEEEEecccCCC-CcceeeccCCCCCCCcEEeEEEEeeEEecCCceEEEEeec
Q 040748 385 NSVISN---------GDDCVSIGSGCYDVDIRNITCGPG-HGISIGSLGNHNSRACVSNITVRDSVIKVSNNGVRIKTWQ 454 (584)
Q Consensus 385 n~~i~~---------gDDgIai~sgs~NV~I~Nc~~~~g-~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~~GI~Iks~~ 454 (584)
|++|.+ ..|||.+.+ ++||+|+||++..+ ++|+|++. +||+|+||++... +||.|++..
T Consensus 163 ~~~I~~~~~d~~~~~NtDGidi~~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~g-hGisiGS~G 231 (362)
T 1czf_A 163 DVTINNADGDTQGGHNTDAFDVGN-SVGVNIIKPWVHNQDDCLAVNSG---------ENIWFTGGTCIGG-HGLSIGSVG 231 (362)
T ss_dssp SCEEECGGGGTTTCCSCCSEEECS-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESS-CCEEEEEEC
T ss_pred EEEEECCccccccCCCCCceeecC-cceEEEEeeEEecCCCEEEEeCC---------eEEEEEEEEEeCC-ceeEEeecc
Confidence 999986 257898876 89999999999988 57999761 8999999999985 589999852
Q ss_pred -CCCCeEEeEEEEceEEcCCcccEEEEEeecCCCCCCCCCCCeeEEeEEEEeEEEeecCCCCCeEEec---------C--
Q 040748 455 -GGSGAVSGITFSNIHMNNVRNPIIIDQYYCLTKDCTNKTSAVYVSDILYSNIKGTYDIRSPPMHFAC---------S-- 522 (584)
Q Consensus 455 -g~~G~V~NItf~NI~i~~v~~~I~I~~~y~~~~~~~~~~~~~~I~nItf~NI~gt~~~~~~~i~i~~---------~-- 522 (584)
...+.|+||+|+|++|.+..++++|+.+.+ ..+.++||+|+||++....+ .++.+.. .
T Consensus 232 ~~~~~~v~nV~v~n~~~~~t~~GirIKt~~g---------~~G~v~nI~~~ni~~~~v~~-~~i~I~~~Y~~~~~~~~p~ 301 (362)
T 1czf_A 232 DRSNNVVKNVTIEHSTVSNSENAVRIKTISG---------ATGSVSEITYSNIVMSGISD-YGVVIQQDYEDGKPTGKPT 301 (362)
T ss_dssp SSSCCEEEEEEEEEEEEEEEEEEEEEEEETT---------CCEEEEEEEEEEEEEEEEEE-EEEEEEEEEETTEECSCCC
T ss_pred ccCCCCEEEEEEEeeEEECCceEEEEEEeCC---------CCceEeeEEEEeEEEECccc-ccEEEEEecCCCCCCCCCC
Confidence 245789999999999999999999998632 35789999999999876521 2444431 1
Q ss_pred CCCceecEEEEeEEEEcCCCCccccceee
Q 040748 523 DTVPCTNLTLSEVELLPAKGDLVSDPFCW 551 (584)
Q Consensus 523 ~~~~~~nItf~NI~i~~~~g~~~~~~~c~ 551 (584)
...+++||+|+||+.+...+.....+.|+
T Consensus 302 ~~~~i~nI~~~ni~gt~~~~~~~i~i~c~ 330 (362)
T 1czf_A 302 NGVTIQDVKLESVTGSVDSGATEIYLLCG 330 (362)
T ss_dssp SSEEEEEEEEEEEEEEECTTSEEEEEECC
T ss_pred CCceEEEEEEEEEEEEecCCceEEEEEeC
Confidence 13579999999999998764333445554
No 23
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=99.83 E-value=7.2e-19 Score=184.76 Aligned_cols=203 Identities=20% Similarity=0.219 Sum_probs=160.9
Q ss_pred eEEEEeecCceEeee---eEecC--CCc-------------eeeeeccccEEEEeEEEECCCCCCCCCceeecCcccEEE
Q 040748 322 ALRFFMSSNLTVQRL---RIKDS--PQF-------------HFRFDNCKNVHIESIHITAPALSPNTDGIHIENTNGVEI 383 (584)
Q Consensus 322 ~I~f~~s~nvtI~gv---ti~ns--~~~-------------~I~i~~s~nV~I~nv~I~~~~~~~ntDGI~i~~S~nV~I 383 (584)
+|.+.. ++|+|.|. +|... .+| .|.+..|+|++|++++|.+++. .+|++..|++|+|
T Consensus 66 li~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~----~~i~i~~~~nv~i 140 (339)
T 1ia5_A 66 LISVSG-SDLTITGASGHSINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSPV----QVFSVAGSDYLTL 140 (339)
T ss_dssp SEEEEE-ESCEEEECTTCEEECCGGGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSS----CCEEEESCEEEEE
T ss_pred EEEEEc-CcEEEEcCCCeEEeCCCCccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCCc----ceEEEecccCeEE
Confidence 466644 99999997 66433 223 4889999999999999999765 4799999999999
Q ss_pred EceEEecC---------CCcEEeCCCceeEEEEecccCCC-CcceeeccCCCCCCCcEEeEEEEeeEEecCCceEEEEee
Q 040748 384 YNSVISNG---------DDCVSIGSGCYDVDIRNITCGPG-HGISIGSLGNHNSRACVSNITVRDSVIKVSNNGVRIKTW 453 (584)
Q Consensus 384 ~n~~i~~g---------DDgIai~sgs~NV~I~Nc~~~~g-~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~~GI~Iks~ 453 (584)
+++.|.+. .|||.+.. ++||+|+||++..+ ++|+|++ -+||+|+||++... +||.|++.
T Consensus 141 ~~~~I~~~~~d~~~~~ntDGid~~~-s~nV~I~n~~i~~gDDcIaiks---------g~nI~i~n~~~~~g-hGisiGS~ 209 (339)
T 1ia5_A 141 KDITIDNSDGDDNGGHNTDAFDIGT-STYVTISGATVYNQDDCVAVNS---------GENIYFSGGYCSGG-HGLSIGSV 209 (339)
T ss_dssp ESCEEECGGGTTTTCCSCCSEEEES-CEEEEEESCEEECSSCSEEESS---------EEEEEEESCEEESS-SCEEEEEE
T ss_pred eeEEEECCccccccCCCCCcEEecC-CceEEEEeeEEEcCCCeEEEeC---------CeEEEEEeEEEECC-ceEEECcC
Confidence 99999862 57898866 89999999999887 6799976 18999999999975 58999885
Q ss_pred cC-CCCeEEeEEEEceEEcCCcccEEEEEeecCCCCCCCCCCCeeEEeEEEEeEEEeecCCCCCeEEec-------C--C
Q 040748 454 QG-GSGAVSGITFSNIHMNNVRNPIIIDQYYCLTKDCTNKTSAVYVSDILYSNIKGTYDIRSPPMHFAC-------S--D 523 (584)
Q Consensus 454 ~g-~~G~V~NItf~NI~i~~v~~~I~I~~~y~~~~~~~~~~~~~~I~nItf~NI~gt~~~~~~~i~i~~-------~--~ 523 (584)
.. ..+.|+||+|+|++|.+..++++|+.+.+ ..+.++||+|+||++..... .++.+.. . .
T Consensus 210 g~~~~~~v~nV~v~n~~~~~t~~girIKt~~g---------~~G~v~nI~~~ni~~~~v~~-~~i~i~~~y~~~~~~p~~ 279 (339)
T 1ia5_A 210 GGRSDNTVKNVTFVDSTIINSDNGVRIKTNID---------TTGSVSDVTYKDITLTSIAK-YGIVVQQNYGDTSSTPTT 279 (339)
T ss_dssp CSSSCCEEEEEEEEEEEEESCSEEEEEEEETT---------CCCEEEEEEEEEEEEEEESS-EEEEEEEEETCTTSCCCS
T ss_pred CcccCCCEEEEEEEeeEEECCCcEEEEEEeCC---------CCcEEEeeEEEEEEEECccc-ccEEEEccCCCCCCCCcC
Confidence 32 34789999999999999999999998632 35789999999999886532 2455542 1 2
Q ss_pred CCceecEEEEeEEEEcCCCCcccccee
Q 040748 524 TVPCTNLTLSEVELLPAKGDLVSDPFC 550 (584)
Q Consensus 524 ~~~~~nItf~NI~i~~~~g~~~~~~~c 550 (584)
...++||+|+||+.+...+.....+.|
T Consensus 280 ~~~i~ni~~~ni~gt~~~~~~~v~i~c 306 (339)
T 1ia5_A 280 GVPITDFVLDNVHGSVVSSGTNILISC 306 (339)
T ss_dssp SSCEEEEEEEEEEEEECTTSEEEEEEC
T ss_pred CceEEEEEEEeEEEEeCCCCEEEEEEe
Confidence 357999999999999876433344566
No 24
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=99.82 E-value=1.1e-18 Score=183.43 Aligned_cols=203 Identities=22% Similarity=0.281 Sum_probs=160.6
Q ss_pred eEEEEeecCceEeee---eEecC--CCc-------------eeeeeccccEEEEeEEEECCCCCCCCCceeecCcccEEE
Q 040748 322 ALRFFMSSNLTVQRL---RIKDS--PQF-------------HFRFDNCKNVHIESIHITAPALSPNTDGIHIENTNGVEI 383 (584)
Q Consensus 322 ~I~f~~s~nvtI~gv---ti~ns--~~~-------------~I~i~~s~nV~I~nv~I~~~~~~~ntDGI~i~~S~nV~I 383 (584)
++.+.. ++|+|.|. +|... .+| .|.+..|+|++|++++|.+++. .+|++..|++|+|
T Consensus 62 ~i~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp~----~~i~i~~~~nv~i 136 (339)
T 2iq7_A 62 LISFSG-TNININGASGHSIDCQGSRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTPV----QAFSINSATTLGV 136 (339)
T ss_dssp SEEEEE-ESCEEEECTTCEEECCGGGTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCSS----CCEEEESCEEEEE
T ss_pred EEEEEc-ccEEEEcCCCCEEECCcccccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCCc----ceEEEeccCCEEE
Confidence 466654 99999997 66432 233 4889999999999999999765 4799999999999
Q ss_pred EceEEecC---------CCcEEeCCCceeEEEEecccCCC-CcceeeccCCCCCCCcEEeEEEEeeEEecCCceEEEEee
Q 040748 384 YNSVISNG---------DDCVSIGSGCYDVDIRNITCGPG-HGISIGSLGNHNSRACVSNITVRDSVIKVSNNGVRIKTW 453 (584)
Q Consensus 384 ~n~~i~~g---------DDgIai~sgs~NV~I~Nc~~~~g-~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~~GI~Iks~ 453 (584)
+++.|.+. .|||.+.. ++||+|+||++..+ ++|+|++ -+||+|+||++... +||.|++.
T Consensus 137 ~~~~I~~~~~d~~~~~ntDGid~~~-s~nV~I~n~~i~~gDDciaiks---------g~nI~i~n~~~~~g-hGisiGSl 205 (339)
T 2iq7_A 137 YDVIIDNSAGDSAGGHNTDAFDVGS-STGVYISGANVKNQDDCLAINS---------GTNITFTGGTCSGG-HGLSIGSV 205 (339)
T ss_dssp ESCEEECGGGGGTTCCSCCSEEEES-CEEEEEESCEEECSSCSEEESS---------EEEEEEESCEEESS-CCEEEEEE
T ss_pred EEEEEECCccccccCCCCCcEEEcC-cceEEEEecEEecCCCEEEEcC---------CccEEEEeEEEECC-ceEEECcC
Confidence 99999862 57898876 89999999999887 6799976 18999999999986 58999885
Q ss_pred cC-CCCeEEeEEEEceEEcCCcccEEEEEeecCCCCCCCCCCCeeEEeEEEEeEEEeecCCCCCeEEec---------CC
Q 040748 454 QG-GSGAVSGITFSNIHMNNVRNPIIIDQYYCLTKDCTNKTSAVYVSDILYSNIKGTYDIRSPPMHFAC---------SD 523 (584)
Q Consensus 454 ~g-~~G~V~NItf~NI~i~~v~~~I~I~~~y~~~~~~~~~~~~~~I~nItf~NI~gt~~~~~~~i~i~~---------~~ 523 (584)
.. ..+.|+||+|+|++|.+..++++|+.+.+ ..+.++||+|+||++..... .++.+.. .+
T Consensus 206 g~~~~~~v~nV~v~n~~~~~~~~girIkt~~g---------~~G~v~nI~~~ni~~~~v~~-~~i~i~~~y~~~~~~~~p 275 (339)
T 2iq7_A 206 GGRSDNTVKTVTISNSKIVNSDNGVRIKTVSG---------ATGSVSGVTYSGITLSNIAK-YGIVIEQDYENGSPTGTP 275 (339)
T ss_dssp SSSSCCEEEEEEEEEEEEESCSEEEEEEEETT---------CCCEEEEEEEEEEEEEEESS-EEEEEEEEEETTEECSCC
T ss_pred CcccCCCEEEEEEEeeEEECCCcEEEEEEeCC---------CCeEEEEEEEEeEEccCccc-ccEEEEeecCCCCCCCCC
Confidence 22 34789999999999999999999998632 34789999999999886532 2444431 11
Q ss_pred --CCceecEEEEeEEEEcCCCCcccccee
Q 040748 524 --TVPCTNLTLSEVELLPAKGDLVSDPFC 550 (584)
Q Consensus 524 --~~~~~nItf~NI~i~~~~g~~~~~~~c 550 (584)
...++||+|+||+++...+.....+.|
T Consensus 276 ~~~~~i~ni~~~ni~gt~~~~~~~~~i~c 304 (339)
T 2iq7_A 276 TNGVPITGLTLSKITGSVASSGTNVYILC 304 (339)
T ss_dssp CSSSCEEEEEEEEEEEEECTTSEEEEEEC
T ss_pred CCCceEEEEEEEeEEEEeCCCCEEEEEEe
Confidence 357999999999999877433344555
No 25
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.81 E-value=2.1e-18 Score=181.04 Aligned_cols=202 Identities=21% Similarity=0.266 Sum_probs=159.2
Q ss_pred eEEEEeecCceEeee---eEecC--CCc-------------eeeeeccccEEEEeEEEECCCCCCCCCceeecCcccEEE
Q 040748 322 ALRFFMSSNLTVQRL---RIKDS--PQF-------------HFRFDNCKNVHIESIHITAPALSPNTDGIHIENTNGVEI 383 (584)
Q Consensus 322 ~I~f~~s~nvtI~gv---ti~ns--~~~-------------~I~i~~s~nV~I~nv~I~~~~~~~ntDGI~i~~S~nV~I 383 (584)
++.+ ..++|+|.|. +|... .+| .+.+..|+|++|++++|.+++.+ +|++. |++|+|
T Consensus 62 li~~-~~~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~----~i~i~-~~nv~i 135 (336)
T 1nhc_A 62 LIRF-GGKDLTVTMADGAVIDGDGSRWWDSKGTNGGKTKPKFMYIHDVEDSTFKGINIKNTPVQ----AISVQ-ATNVHL 135 (336)
T ss_dssp SEEC-CEESCEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSSC----CEEEE-EEEEEE
T ss_pred EEEE-ecCCEEEEcCCCeEEECCccccccccCcCCCCCCceEEEEeeeCcEEEEEEEEEeCCcc----EEEEE-eCCEEE
Confidence 4555 4599999997 55432 233 38899999999999999998655 69999 999999
Q ss_pred EceEEecC---------CCcEEeCCCceeEEEEecccCCC-CcceeeccCCCCCCCcEEeEEEEeeEEecCCceEEEEee
Q 040748 384 YNSVISNG---------DDCVSIGSGCYDVDIRNITCGPG-HGISIGSLGNHNSRACVSNITVRDSVIKVSNNGVRIKTW 453 (584)
Q Consensus 384 ~n~~i~~g---------DDgIai~sgs~NV~I~Nc~~~~g-~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~~GI~Iks~ 453 (584)
+|+.|.+. .|||.+.. ++||+|+||++..+ ++|+|++ -+||+|+||++... +||.|++.
T Consensus 136 ~~~~I~~~~~d~~~~~ntDGidi~~-s~nV~I~n~~i~~gDDciaiks---------g~nI~i~n~~~~~g-hGisiGS~ 204 (336)
T 1nhc_A 136 NDFTIDNSDGDDNGGHNTDGFDISE-STGVYISGATVKNQDDCIAINS---------GESISFTGGTCSGG-HGLSIGSV 204 (336)
T ss_dssp ESCEEECTTHHHHTCCSCCSEEECS-CEEEEEESCEEESSSEEEEESS---------EEEEEEESCEEESS-SEEEEEEE
T ss_pred EEEEEECCCcccccCCCCCcEEecC-CCeEEEEeCEEEcCCCEEEEeC---------CeEEEEEeEEEECC-cCceEccC
Confidence 99999863 58899976 89999999999887 5699976 18999999999975 58999885
Q ss_pred cC-CCCeEEeEEEEceEEcCCcccEEEEEeecCCCCCCCCCCCeeEEeEEEEeEEEeecCCCCCeEEe---cC-------
Q 040748 454 QG-GSGAVSGITFSNIHMNNVRNPIIIDQYYCLTKDCTNKTSAVYVSDILYSNIKGTYDIRSPPMHFA---CS------- 522 (584)
Q Consensus 454 ~g-~~G~V~NItf~NI~i~~v~~~I~I~~~y~~~~~~~~~~~~~~I~nItf~NI~gt~~~~~~~i~i~---~~------- 522 (584)
.. ..+.|+||+|+|++|.+..++++|+.+.+ ..+.++||+|+||++..... .++.+. +.
T Consensus 205 g~~~~~~v~nV~v~n~~~~~t~~girIkt~~g---------~~G~v~nI~~~ni~~~~v~~-~~i~i~~~y~~~~~~~~p 274 (336)
T 1nhc_A 205 GGRDDNTVKNVTISDSTVSNSANGVRIKTIYK---------ETGDVSEITYSNIQLSGITD-YGIVIEQDYENGSPTGTP 274 (336)
T ss_dssp SSSSCCEEEEEEEEEEEEESCSEEEEEEEETT---------CCCEEEEEEEEEEEEEEESS-EEEEEEEEEETTEECSCC
T ss_pred ccccCCCEEEEEEEeeEEECCCcEEEEEEECC---------CCCEEeeeEEeeEEeecccc-ccEEEEeecCCCCCCCCC
Confidence 32 34789999999999999999999998632 35689999999999887632 244442 11
Q ss_pred -CCCceecEEEEeEEEEcCCCCcccccee
Q 040748 523 -DTVPCTNLTLSEVELLPAKGDLVSDPFC 550 (584)
Q Consensus 523 -~~~~~~nItf~NI~i~~~~g~~~~~~~c 550 (584)
...+++||+|+||+.+...+.....+.|
T Consensus 275 ~~~~~i~~i~~~ni~gt~~~~~~~v~i~c 303 (336)
T 1nhc_A 275 STGIPITDVTVDGVTGTLEDDATQVYILC 303 (336)
T ss_dssp CSSSCEEEEEEEEEEEEECTTCEEEEEEC
T ss_pred CCCceEEEEEEEeEEEEeCCCCEEEEEEc
Confidence 1357999999999999876332334555
No 26
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=99.80 E-value=1.4e-17 Score=179.89 Aligned_cols=170 Identities=18% Similarity=0.261 Sum_probs=143.2
Q ss_pred eeeeeccccEEEEeEEEECCCCCCCCCceeecCcccEEEEceEEec----CCCcEEeCCCceeEEEEecccCCC-Cccee
Q 040748 345 HFRFDNCKNVHIESIHITAPALSPNTDGIHIENTNGVEIYNSVISN----GDDCVSIGSGCYDVDIRNITCGPG-HGISI 419 (584)
Q Consensus 345 ~I~i~~s~nV~I~nv~I~~~~~~~ntDGI~i~~S~nV~I~n~~i~~----gDDgIai~sgs~NV~I~Nc~~~~g-~GI~I 419 (584)
.|++..|+|++|++++|.+++.+ +|++..|++|+|+|+.|.+ +.|||.+.. +||+|+||++..+ ++|+|
T Consensus 129 ~i~~~~~~nv~I~~iti~nsp~~----~i~i~~~~nv~I~n~~I~~~d~~ntDGidi~~--~nV~I~n~~i~~gDD~Iai 202 (422)
T 1rmg_A 129 ILRLTDVTHFSVHDIILVDAPAF----HFTMDTCSDGEVYNMAIRGGNEGGLDGIDVWG--SNIWVHDVEVTNKDECVTV 202 (422)
T ss_dssp EEEEEEEEEEEEEEEEEECCSSC----SEEEEEEEEEEEEEEEEECCSSTTCCSEEEEE--EEEEEEEEEEESSSEEEEE
T ss_pred EEEEcccceEEEECeEEECCCce----EEEEeCcCCEEEEeEEEECCCCCCCccEeecC--CeEEEEeeEEeCCCCeEEe
Confidence 58899999999999999986543 8999999999999999997 468999976 8999999999987 56999
Q ss_pred eccCCCCCCCcEEeEEEEeeEEecCCceEEEEeecCCCCeEEeEEEEceEEcCCcccEEEEEeecCCCCCCCCCCCeeEE
Q 040748 420 GSLGNHNSRACVSNITVRDSVIKVSNNGVRIKTWQGGSGAVSGITFSNIHMNNVRNPIIIDQYYCLTKDCTNKTSAVYVS 499 (584)
Q Consensus 420 GS~g~~~~~~~v~nI~I~Nit~~~s~~GI~Iks~~g~~G~V~NItf~NI~i~~v~~~I~I~~~y~~~~~~~~~~~~~~I~ 499 (584)
++ ..+||+|+||++... +||.|++. +..+.|+||+|+|++|.+..++|+|+.+ . ..+.++
T Consensus 203 ~s--------~~~nI~I~n~~~~~~-~GisIGS~-g~~~~v~nV~v~n~~~~~~~~Gi~Ikt~-~---------g~G~v~ 262 (422)
T 1rmg_A 203 KS--------PANNILVESIYCNWS-GGCAMGSL-GADTDVTDIVYRNVYTWSSNQMYMIKSN-G---------GSGTVS 262 (422)
T ss_dssp EE--------EEEEEEEEEEEEESS-SEEEEEEE-CTTEEEEEEEEEEEEEESSSCSEEEEEB-B---------CCEEEE
T ss_pred CC--------CCcCEEEEeEEEcCC-cceeeccc-CCCCcEEEEEEEeEEEeccceEEEEEec-C---------CCcEEE
Confidence 87 479999999999876 59999985 4446899999999999999999999973 1 136899
Q ss_pred eEEEEeEEEeecCCCCCeEEec---------CCCCceecEEEEeEEEEcCCC
Q 040748 500 DILYSNIKGTYDIRSPPMHFAC---------SDTVPCTNLTLSEVELLPAKG 542 (584)
Q Consensus 500 nItf~NI~gt~~~~~~~i~i~~---------~~~~~~~nItf~NI~i~~~~g 542 (584)
||+|+||++..... ++.+.. .....++||+|+||+.+...+
T Consensus 263 nI~~~NI~~~~v~~--~i~i~~~y~~~~~~~~~~~~i~nI~~~nI~gt~~~g 312 (422)
T 1rmg_A 263 NVLLENFIGHGNAY--SLDIDGYWSSMTAVAGDGVQLNNITVKNWKGTEANG 312 (422)
T ss_dssp EEEEEEEEEEEESC--SEEEETBCTTSCCBSSSCCEEEEEEEEEEEEEESCT
T ss_pred EEEEEeEEEECccc--cEEEEeeccCCCcccCCCceEEEEEEEeEEEEeccc
Confidence 99999999877643 566642 134579999999999998653
No 27
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=99.79 E-value=1.1e-17 Score=176.31 Aligned_cols=204 Identities=19% Similarity=0.193 Sum_probs=158.1
Q ss_pred eEEEEeecCceEee---eeEecCC--Cc--------------eeee-e-ccccEEEEeEEEECCCCCCCCCceeecCccc
Q 040748 322 ALRFFMSSNLTVQR---LRIKDSP--QF--------------HFRF-D-NCKNVHIESIHITAPALSPNTDGIHIENTNG 380 (584)
Q Consensus 322 ~I~f~~s~nvtI~g---vti~ns~--~~--------------~I~i-~-~s~nV~I~nv~I~~~~~~~ntDGI~i~~S~n 380 (584)
+|.+ ..++|+|.| -+|.... +| .|.+ . .|+|++|++++|.+++.+ +|++..|++
T Consensus 63 ~i~~-~~~ni~I~G~~~G~IdG~G~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp~~----~i~i~~~~n 137 (349)
T 1hg8_A 63 PIVI-SGSNITITGASGHVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWPVH----CFDITGSSQ 137 (349)
T ss_dssp SEEE-EEESCEEEECTTCEEECCGGGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCSSE----EEEEESCEE
T ss_pred eEEE-ECccEEEEecCCCEEcCCcchhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcCCCc----eEEEeccCC
Confidence 4666 459999999 5664321 11 4677 6 788999999999997654 799999999
Q ss_pred EEEEceEEecC-----------------CCcEEeCCCceeEEEEecccCCC-CcceeeccCCCCCCCcEEeEEEEeeEEe
Q 040748 381 VEIYNSVISNG-----------------DDCVSIGSGCYDVDIRNITCGPG-HGISIGSLGNHNSRACVSNITVRDSVIK 442 (584)
Q Consensus 381 V~I~n~~i~~g-----------------DDgIai~sgs~NV~I~Nc~~~~g-~GI~IGS~g~~~~~~~v~nI~I~Nit~~ 442 (584)
|+|+|+.|.+. .|||.+.. ++||+|+||++..+ ++|+|++ -+||+|+||++.
T Consensus 138 v~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~-s~nV~I~n~~i~~gDDcIaiks---------g~nI~i~n~~~~ 207 (349)
T 1hg8_A 138 LTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISS-SDHVTLDNNHVYNQDDCVAVTS---------GTNIVVSNMYCS 207 (349)
T ss_dssp EEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEES-CEEEEEEEEEEECSSCSEEESS---------EEEEEEEEEEEE
T ss_pred EEEEEEEEECCCCccccccccccccCCCCCeEEEcc-ccEEEEEeeEEecCCCeEEeeC---------CeEEEEEeEEEe
Confidence 99999999851 57888865 89999999999877 6799976 289999999998
Q ss_pred cCCceEEEEeec-CCCCeEEeEEEEceEEcCCcccEEEEEeecCCCCCCCCCCCeeEEeEEEEeEEEeecCCCCCeEEec
Q 040748 443 VSNNGVRIKTWQ-GGSGAVSGITFSNIHMNNVRNPIIIDQYYCLTKDCTNKTSAVYVSDILYSNIKGTYDIRSPPMHFAC 521 (584)
Q Consensus 443 ~s~~GI~Iks~~-g~~G~V~NItf~NI~i~~v~~~I~I~~~y~~~~~~~~~~~~~~I~nItf~NI~gt~~~~~~~i~i~~ 521 (584)
.. +||.|++.- ...+.|+||+|+|++|.+..++++|+.+. ...+.++||+|+||++....+ .++.+..
T Consensus 208 ~g-hGisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~---------g~~G~v~nI~~~ni~~~~v~~-~~i~i~~ 276 (349)
T 1hg8_A 208 GG-HGLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNS---------GATGTINNVTYQNIALTNIST-YGVDVQQ 276 (349)
T ss_dssp SS-CCEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEET---------TCCEEEEEEEEEEEEEEEEEE-EEEEEEE
T ss_pred CC-cceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecC---------CCCccccceEEEEEEEEcccc-ccEEEEe
Confidence 75 589998851 23478999999999999999999999862 235789999999999876521 2344321
Q ss_pred ---C------C--CCceecEEEEeEEEEcCCCCccccceee
Q 040748 522 ---S------D--TVPCTNLTLSEVELLPAKGDLVSDPFCW 551 (584)
Q Consensus 522 ---~------~--~~~~~nItf~NI~i~~~~g~~~~~~~c~ 551 (584)
. + ...++||+|+||+.+...+.....+.|+
T Consensus 277 ~Y~~~~~~~~p~~~~~i~~I~~~ni~gt~~~~~~~v~i~c~ 317 (349)
T 1hg8_A 277 DYLNGGPTGKPTNGVKISNIKFIKVTGTVASSAQDWFILCG 317 (349)
T ss_dssp EECSSSBCSCCCSSEEEEEEEEEEEEEEECTTSEEEEEECC
T ss_pred eccCCCCCCcccCCceEEEEEEEeEEEEeCCCCEEEEEEeC
Confidence 1 1 2469999999999998774444456665
No 28
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=99.79 E-value=1.6e-17 Score=176.87 Aligned_cols=198 Identities=16% Similarity=0.223 Sum_probs=160.7
Q ss_pred eeEEEEeecCceEeee-eEecCC----------Cc-----------------eeeeeccccEEEEeEEEECCCCCCCCCc
Q 040748 321 IALRFFMSSNLTVQRL-RIKDSP----------QF-----------------HFRFDNCKNVHIESIHITAPALSPNTDG 372 (584)
Q Consensus 321 ~~I~f~~s~nvtI~gv-ti~ns~----------~~-----------------~I~i~~s~nV~I~nv~I~~~~~~~ntDG 372 (584)
.+|.+.+.+||+|.|- +|.... +| .|.+..|+|++|+++++.+++.+ +
T Consensus 101 ~~I~~~~~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~iti~nsp~~----~ 176 (376)
T 1bhe_A 101 AFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPNF----H 176 (376)
T ss_dssp CSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEESCEEEEEEEEEEECCSSC----S
T ss_pred cEEEEECCEeEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEcceEEEEEeEEEECCCcE----E
Confidence 3788899999999986 553322 12 37889999999999999997654 6
Q ss_pred eeecCcccEEEEceEEec-----CCCcEEeCCCceeEEEEecccCCC-CcceeeccCCCCCCCcEEeEEEEeeEEecCCc
Q 040748 373 IHIENTNGVEIYNSVISN-----GDDCVSIGSGCYDVDIRNITCGPG-HGISIGSLGNHNSRACVSNITVRDSVIKVSNN 446 (584)
Q Consensus 373 I~i~~S~nV~I~n~~i~~-----gDDgIai~sgs~NV~I~Nc~~~~g-~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~~ 446 (584)
+++..|++|+|+|+.|.+ ..|||.+.+ ++||+|+||++..+ ++|+|++.+ .....+||+|+||+|.. .+
T Consensus 177 i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~-s~nV~I~n~~i~~gDDcIaiks~~---~~~~s~nI~I~n~~~~~-gh 251 (376)
T 1bhe_A 177 VVFSDGDGFTAWKTTIKTPSTARNTDGIDPMS-SKNITIAYSNIATGDDNVAIKAYK---GRAETRNISILHNDFGT-GH 251 (376)
T ss_dssp EEEESCEEEEEEEEEEECCTTCSSCCSEEEES-CEEEEEESCEEECSSCSEEEEECT---TSCCEEEEEEEEEEECS-SS
T ss_pred EEEeCCCcEEEEeEEEECCCCCCCCceEeecC-CceEEEEeCEEecCCCeEEEcccC---CCCCceEEEEEeeEEEc-cc
Confidence 889999999999999987 468999976 89999999999987 679998743 23579999999999986 56
Q ss_pred eEEEEeecCCCCeEEeEEEEceEEcCCcccEEEEEeecCCCCCCCCCCCeeEEeEEEEeEEEeecCCCCCeEEecC----
Q 040748 447 GVRIKTWQGGSGAVSGITFSNIHMNNVRNPIIIDQYYCLTKDCTNKTSAVYVSDILYSNIKGTYDIRSPPMHFACS---- 522 (584)
Q Consensus 447 GI~Iks~~g~~G~V~NItf~NI~i~~v~~~I~I~~~y~~~~~~~~~~~~~~I~nItf~NI~gt~~~~~~~i~i~~~---- 522 (584)
|+.|++... .|+||+|+|++|.+..++++|+.+. ...+.++||+|+||++..... ++.+...
T Consensus 252 GisiGSe~~---~v~nV~v~n~~~~~t~~GirIKt~~---------g~~G~v~ni~f~ni~~~~v~~--~i~i~~~y~~~ 317 (376)
T 1bhe_A 252 GMSIGSETM---GVYNVTVDDLKMNGTTNGLRIKSDK---------SAAGVVNGVRYSNVVMKNVAK--PIVIDTVYEKK 317 (376)
T ss_dssp CEEEEEEES---SEEEEEEEEEEEESCSEEEEEECCT---------TTCCEEEEEEEEEEEEESCSE--EEEEETTSSCC
T ss_pred cEEeccCCc---cEeeEEEEeeEEeCCCcEEEEEEec---------CCCceEeeEEEEeEEEeCCCc--eEEEEeeccCC
Confidence 899988533 6999999999999999999999752 245789999999999887643 5655421
Q ss_pred ---CCCceecEEEEeEEEEcCC
Q 040748 523 ---DTVPCTNLTLSEVELLPAK 541 (584)
Q Consensus 523 ---~~~~~~nItf~NI~i~~~~ 541 (584)
....++||+|+||+.+...
T Consensus 318 ~~~~~~~i~ni~~~ni~gt~~~ 339 (376)
T 1bhe_A 318 EGSNVPDWSDITFKDVTSETKG 339 (376)
T ss_dssp CCCCCCEEEEEEEEEEEECSCC
T ss_pred CCCcCcEEEEEEEEEEEEEecc
Confidence 1345999999999998654
No 29
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=99.77 E-value=5.1e-18 Score=178.01 Aligned_cols=202 Identities=11% Similarity=0.112 Sum_probs=156.8
Q ss_pred eEEEEeecCceEeee--eEecC--CCc-------------eeeeeccccEEEEeEEEECCCCCCCCCceeecCccc-EEE
Q 040748 322 ALRFFMSSNLTVQRL--RIKDS--PQF-------------HFRFDNCKNVHIESIHITAPALSPNTDGIHIENTNG-VEI 383 (584)
Q Consensus 322 ~I~f~~s~nvtI~gv--ti~ns--~~~-------------~I~i~~s~nV~I~nv~I~~~~~~~ntDGI~i~~S~n-V~I 383 (584)
+|.+. .+|++|.|- +|... .+| .|.+..|+ ++|+++++.+++.| +|++..|++ |+|
T Consensus 60 ~i~~~-~~ni~I~G~~G~idG~G~~ww~~~~~~~~~~rP~~i~~~~~~-v~i~giti~nsp~~----~i~i~~~~n~v~i 133 (335)
T 1k5c_A 60 LFTID-GTGINFVGADHIFDGNGALYWDGKGTNNGTHKPHPFLKIKGS-GTYKKFEVLNSPAQ----AISVGPTDAHLTL 133 (335)
T ss_dssp SEEEE-EEEEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCSEEEEEE-EEEESCEEESCSSC----CEEEEEEEEEEEE
T ss_pred EEEEE-ccCEEEEeCccEEcCChhHhhhcccccCCCCCCeEEEEeceE-EEEEEEEEECCCcc----eEEEEccCCeEEE
Confidence 46665 699999983 45222 122 27888999 99999999998765 599999999 999
Q ss_pred EceEEec----------CCCcEEeCCCceeEEEEecccCCC-CcceeeccCCCCCCCcEEeEEEEeeEEecCCceEEEEe
Q 040748 384 YNSVISN----------GDDCVSIGSGCYDVDIRNITCGPG-HGISIGSLGNHNSRACVSNITVRDSVIKVSNNGVRIKT 452 (584)
Q Consensus 384 ~n~~i~~----------gDDgIai~sgs~NV~I~Nc~~~~g-~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~~GI~Iks 452 (584)
+|++|.+ ..|||.+ + ++||+|+||++..+ ++|+|++- +||+|+||++... +||.|++
T Consensus 134 ~~v~I~~~~~d~~~~~~NtDGidi-~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~g-hGisIGS 201 (335)
T 1k5c_A 134 DGITVDDFAGDTKNLGHNTDGFDV-S-ANNVTIQNCIVKNQDDCIAINDG---------NNIRFENNQCSGG-HGISIGS 201 (335)
T ss_dssp ESCEEECGGGGGGGCCCSCCSEEE-E-CSSEEEESCEEESSSCSEEEEEE---------EEEEEESCEEESS-CCEEEEE
T ss_pred EEEEEECCCCcccccCCCCCeEcc-c-CCeEEEEeeEEEcCCCEEEeeCC---------eeEEEEEEEEECC-ccCeEee
Confidence 9999986 3578999 4 89999999999987 56999871 8999999999985 6899998
Q ss_pred ecCCCCeEEeEEEEceEEcCCcccEEEEEeecCCCCCCCCCCC-eeEEeEEEEeEEEeecCCCCCeEEec-------CC-
Q 040748 453 WQGGSGAVSGITFSNIHMNNVRNPIIIDQYYCLTKDCTNKTSA-VYVSDILYSNIKGTYDIRSPPMHFAC-------SD- 523 (584)
Q Consensus 453 ~~g~~G~V~NItf~NI~i~~v~~~I~I~~~y~~~~~~~~~~~~-~~I~nItf~NI~gt~~~~~~~i~i~~-------~~- 523 (584)
.. ..+.|+||+|+|++|.+..++++|+.+.+ .. +.++||+|+||++....+ .++.+.. .+
T Consensus 202 ~g-~~~~v~nV~v~n~~~~~t~~girIKt~~g---------~~~G~v~nI~f~ni~~~~v~~-~~i~i~~~Y~~~~~~p~ 270 (335)
T 1k5c_A 202 IA-TGKHVSNVVIKGNTVTRSMYGVRIKAQRT---------ATSASVSGVTYDANTISGIAK-YGVLISQSYPDDVGNPG 270 (335)
T ss_dssp EC-TTCEEEEEEEESCEEEEEEEEEEEEEETT---------CCSCEEEEEEEESCEEEEEEE-EEEEEEEEETSSSSSCC
T ss_pred cc-CCCCEEEEEEEeeEEECCCceEEEEEeCC---------CCcceEeeeEEEEEEEEcccc-ccEEEEeeCCCCCCCCC
Confidence 63 25789999999999999999999998632 23 689999999999876521 2454442 11
Q ss_pred -CCceecEEEEeEE--EEcCCCCccccceeec
Q 040748 524 -TVPCTNLTLSEVE--LLPAKGDLVSDPFCWN 552 (584)
Q Consensus 524 -~~~~~nItf~NI~--i~~~~g~~~~~~~c~n 552 (584)
...++||+|+||+ .+...+.....+.|++
T Consensus 271 ~~~~i~nI~~~nI~~~Gt~~~~~~~i~i~c~~ 302 (335)
T 1k5c_A 271 TGAPFSDVNFTGGATTIKVNNAATRVTVECGN 302 (335)
T ss_dssp SSSCEEEEEECSSCEEEEECTTCEEEEEECSS
T ss_pred CCceEEEEEEEEEEEeeEEcCCceEEEEECCC
Confidence 3579999999999 4454423344566654
No 30
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.69 E-value=1.2e-15 Score=169.69 Aligned_cols=238 Identities=12% Similarity=0.099 Sum_probs=168.7
Q ss_pred CcE-EEEcCCeEEEeeeeeeecccCCceEEeeeeeecCCCCC------CcccccCCcceeEEEe------eeeceEEecC
Q 040748 221 FAV-IHVPYGFSFMIQSTIFTGPCQGSIVFQVDGTIMPPDGP------ESWLQKNSKRQWLVFY------KINELSLQGG 287 (584)
Q Consensus 221 g~~-v~~p~G~tY~i~~~~ltgp~ksnvtL~l~GtL~~s~~~------~~~~~~~~~~~lI~~~------~~~NVtI~G~ 287 (584)
+.. |++++| .++.+.+.+.+ ..+++|...|+|.+.... ..|+....+...+.+. +++||.|+|.
T Consensus 264 nvt~L~L~~G-A~l~g~i~~~~--~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~Gi 340 (574)
T 1ogo_X 264 NTYWVYLAPG-AYVKGAIEYFT--KQNFYATGHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGP 340 (574)
T ss_dssp TCCEEEECTT-EEEESCEEECC--SSCEEEESSCEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEESC
T ss_pred CCceEEecCC-cEEEccEEEeC--ceeEEEEeCEEEeCCCcccccccccccccccCCcceEEEEeccccCCceeEEEECe
Confidence 456 999999 78888887766 688999888888654211 1111111123334444 8999999998
Q ss_pred eEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCeeEEEEeecCc--eEeeeeEecCCCc---eeeeeccccEEEEeEEEE
Q 040748 288 GTIDGRGHKWWDLPCKPHKGINGTTSPGPCDSPIALRFFMSSNL--TVQRLRIKDSPQF---HFRFDNCKNVHIESIHIT 362 (584)
Q Consensus 288 G~IDGnG~~ww~~~~~~~~g~~g~~~~g~~~rP~~I~f~~s~nv--tI~gvti~ns~~~---~I~i~~s~nV~I~nv~I~ 362 (584)
.+++. .+| .+++..|+++ +|+++++.+++.+ +|++. +||+|+||+|.
T Consensus 341 ti~NS---p~w-----------------------~i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I~ 392 (574)
T 1ogo_X 341 TINAP---PFN-----------------------TMDFNGNSGISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFWH 392 (574)
T ss_dssp EEECC---SSC-----------------------SEEECSSSCEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEEE
T ss_pred EEECC---CCc-----------------------EEeecCCCChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEEE
Confidence 88763 233 3688899999 9999999875443 78888 99999999999
Q ss_pred CCCCCCCCCceeecCcccEEEEceEEecCCC-c-EEeCC---CceeEEEEecccCCCC---------cceeeccCCCC--
Q 040748 363 APALSPNTDGIHIENTNGVEIYNSVISNGDD-C-VSIGS---GCYDVDIRNITCGPGH---------GISIGSLGNHN-- 426 (584)
Q Consensus 363 ~~~~~~ntDGI~i~~S~nV~I~n~~i~~gDD-g-Iai~s---gs~NV~I~Nc~~~~g~---------GI~IGS~g~~~-- 426 (584)
+. .|+|.+.+ +||+|+||.+..+.. + |.+++ ..+||+|+||++.+.. +..||++.-+.
T Consensus 393 ~g-----DDcIaIks-~NI~I~nc~i~~g~g~g~IsIGS~~g~V~NV~v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~~~ 466 (574)
T 1ogo_X 393 VN-----DDAIKIYY-SGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYASG 466 (574)
T ss_dssp ES-----SCSEECCS-TTCEEEEEEEEECSSSCSEECCSSCCCEEEEEEEEEEEEECCCSSCCTTTTCEEEEECCCSSSS
T ss_pred CC-----CCEEEECC-ccEEEEeEEEECCCCCceEEEcCCCCcEEEEEEEeEEEECCcccceeccccceeeccccccccc
Confidence 95 46787765 999999999998764 4 88875 4799999999997643 23334432110
Q ss_pred ----CCCcEEeEEEEeeEEecCCceEEEEeecCCCCeEEeEEEEceEEcC------Ccc-cEEEEEeecCCCCCCCCCCC
Q 040748 427 ----SRACVSNITVRDSVIKVSNNGVRIKTWQGGSGAVSGITFSNIHMNN------VRN-PIIIDQYYCLTKDCTNKTSA 495 (584)
Q Consensus 427 ----~~~~v~nI~I~Nit~~~s~~GI~Iks~~g~~G~V~NItf~NI~i~~------v~~-~I~I~~~y~~~~~~~~~~~~ 495 (584)
...++ ||+|+|++|.+...++ |...+ .+.|+||+|+||++++ ... +..+... .
T Consensus 467 ~~~~~g~gV-NI~f~NI~~~~v~~~i-i~i~p--~~~I~nI~~~NI~i~g~~~~~~~~~~~~~i~G~-----------~- 530 (574)
T 1ogo_X 467 MSPDSRKSI-SMTVSNVVCEGLCPSL-FRITP--LQNYKNFVVKNVAFPDGLQTNSIGTGESIIPAA-----------S- 530 (574)
T ss_dssp CCCEEEEEE-EEEEEEEEECSSBCEE-EEECC--SEEEEEEEEEEEEETTCBCCSTTCTTCEEECCC-----------T-
T ss_pred cccCCCceE-EEEEEeEEEEceeEee-EEECC--CCCEEEEEEEeEEEeCccccccccccceeEecC-----------C-
Confidence 11228 9999999999987775 44433 3479999999999986 222 1122111 1
Q ss_pred eeEEeEEEEeEEEeec
Q 040748 496 VYVSDILYSNIKGTYD 511 (584)
Q Consensus 496 ~~I~nItf~NI~gt~~ 511 (584)
..++||+|+||++...
T Consensus 531 ~~v~nI~~~NV~i~g~ 546 (574)
T 1ogo_X 531 GLTMGLAISAWTIGGQ 546 (574)
T ss_dssp TCCEEEEEEEEEETTE
T ss_pred CccceEEEEeEEEeCE
Confidence 4679999999997544
No 31
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.66 E-value=4.9e-15 Score=164.54 Aligned_cols=250 Identities=13% Similarity=0.126 Sum_probs=169.6
Q ss_pred CCcE-EEEcCCeEEEeeeeeee-cccCCceEEeeeeeecCCCCC------Ccccc-cCCcceeEEE------eeeeceEE
Q 040748 220 DFAV-IHVPYGFSFMIQSTIFT-GPCQGSIVFQVDGTIMPPDGP------ESWLQ-KNSKRQWLVF------YKINELSL 284 (584)
Q Consensus 220 ~g~~-v~~p~G~tY~i~~~~lt-gp~ksnvtL~l~GtL~~s~~~------~~~~~-~~~~~~lI~~------~~~~NVtI 284 (584)
.+.. ||+++| .++.+.+.+. + ..+++|...|+|.+.... ..|.. ...+...|.+ .+++||.|
T Consensus 221 s~~~~L~l~~G-A~L~gs~~~~~~--~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~~~~~~~c~nV~I 297 (549)
T 1x0c_A 221 SSVTWVYFAPG-AYVKGAVEFLST--ASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVL 297 (549)
T ss_dssp TTCCEEEECTT-EEEESCEEECCC--SSEEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEEEECCSSCEEEEE
T ss_pred CCCCeEecCCC-CEEEEEEEEecC--ceeEEEEeeEEEECCCceecccCcccccccccCCCceEEEeeccccCCceEEEE
Confidence 3566 999999 7888887775 3 568888888888765421 11211 0112233344 88999999
Q ss_pred ecCeEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCeeEEEE-ee-cC--ceEeeeeEecCCC---ceeeeeccccEEEE
Q 040748 285 QGGGTIDGRGHKWWDLPCKPHKGINGTTSPGPCDSPIALRFF-MS-SN--LTVQRLRIKDSPQ---FHFRFDNCKNVHIE 357 (584)
Q Consensus 285 ~G~G~IDGnG~~ww~~~~~~~~g~~g~~~~g~~~rP~~I~f~-~s-~n--vtI~gvti~ns~~---~~I~i~~s~nV~I~ 357 (584)
+|..+.+. .+| .+++. .| ++ ++|+++++.++.. .+|++. +||+|+
T Consensus 298 ~Giti~Ns---p~w-----------------------~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~--~nV~I~ 349 (549)
T 1x0c_A 298 NGVTVSAP---PFN-----------------------SMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY--PGTILQ 349 (549)
T ss_dssp ESCEEECC---SSC-----------------------SEEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC--TTCEEE
T ss_pred ECcEEECC---Cce-----------------------eEEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc--CCEEEE
Confidence 99777653 233 25544 45 69 9999999986433 468887 999999
Q ss_pred eEEEECCCCCCCCCceeecCcccEEEEceEEecCCC-c-EEeCC---CceeEEEEecccCCCC-------cceeeccCCC
Q 040748 358 SIHITAPALSPNTDGIHIENTNGVEIYNSVISNGDD-C-VSIGS---GCYDVDIRNITCGPGH-------GISIGSLGNH 425 (584)
Q Consensus 358 nv~I~~~~~~~ntDGI~i~~S~nV~I~n~~i~~gDD-g-Iai~s---gs~NV~I~Nc~~~~g~-------GI~IGS~g~~ 425 (584)
|++|.+. .|+|.+.+ +||+|+||.+..+.. + |.+++ ..+||+|+||++.+.. |..|++...+
T Consensus 350 n~~i~~g-----DDcIaIks-~NI~I~n~~~~~~~g~~~IsiGs~~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~ 423 (549)
T 1x0c_A 350 DVFYHTD-----DDGLKMYY-SNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNY 423 (549)
T ss_dssp EEEEEES-----SCCEECCS-SSEEEEEEEEEECSSSCSEECCBSCCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBT
T ss_pred eeEEeCC-----CCEEEECC-CCEEEEeeEEEcCCCCceEEECCCCCcEEEEEEEeeEEECccccccccceEEEeccccc
Confidence 9999994 46788876 999999999987554 5 88875 4799999999997653 4225541100
Q ss_pred ---------CCCCcEEeEEEEeeEEecCC-ceEEEEeecCC-CCeEEeEEEEceEEcCCc-----c-cEEEEEeecCCCC
Q 040748 426 ---------NSRACVSNITVRDSVIKVSN-NGVRIKTWQGG-SGAVSGITFSNIHMNNVR-----N-PIIIDQYYCLTKD 488 (584)
Q Consensus 426 ---------~~~~~v~nI~I~Nit~~~s~-~GI~Iks~~g~-~G~V~NItf~NI~i~~v~-----~-~I~I~~~y~~~~~ 488 (584)
...+.++||+|+|++|.+.. .|+.+....+. .+.|+||+|+||++++.. . +..+..+... .
T Consensus 424 ~~g~~~~~~d~~G~i~nI~f~NI~i~nv~~~g~~~~~~~g~pg~~I~nI~i~NI~i~~~~~~~~~~~~~~i~G~~~~--~ 501 (549)
T 1x0c_A 424 LYAPDGLSSNHSTGNSNMTVRNITWSNFRAEGSSSALFRINPIQNLDNISIKNVSIESFEPLSINTTESWMPVWYDL--N 501 (549)
T ss_dssp TTCTTSCCSCCCCBEEEEEEEEEEEEEEEEEEEECCSEEECCSEEEEEEEEEEEEEEEECCGGGTCSCEEECCCBBT--T
T ss_pred ccCccccCcCCCceEccEEEEeEEEEeEEEeceEEeeecCCCCCcCccEEEEEEEEEccccccccccceEEeCCCcc--c
Confidence 12568999999999998865 45443222122 235999999999998765 2 2333322110 1
Q ss_pred CCCCCCCeeEEeEEEEeEEEeec
Q 040748 489 CTNKTSAVYVSDILYSNIKGTYD 511 (584)
Q Consensus 489 ~~~~~~~~~I~nItf~NI~gt~~ 511 (584)
|. ....++||+|+||++.+.
T Consensus 502 ~~---~~~~v~nI~f~NV~i~G~ 521 (549)
T 1x0c_A 502 NG---KQITVTDFSIEGFTVGNT 521 (549)
T ss_dssp TC---CBCCEEEEEEEEEEETTE
T ss_pred cc---cceeeeeEEEEeEEEeCe
Confidence 21 234799999999987644
No 32
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.53 E-value=3.3e-14 Score=159.97 Aligned_cols=122 Identities=20% Similarity=0.296 Sum_probs=90.5
Q ss_pred CCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCceEEEecccccCCCCcchHHHHH
Q 040748 133 GAPSASHAPTNPL--NGYNFTRTPSPSSGPAAPPNKGNDYNSPGAPTTSPANSPDDGNVIDVRKFGAVGDGISDDTEAFK 210 (584)
Q Consensus 133 ~~~~~~~~~~~~~--~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~GA~gdg~tDdT~Aiq 210 (584)
+...+..+|..+| .|++|+|+||||+..+. ..+++||+|||+|||+||||+|||
T Consensus 366 g~~~~~~rp~~Ll~~~g~~~~r~~PqYe~~~~------------------------~~~vnVkd~GA~GDG~tDDT~Ai~ 421 (758)
T 3eqn_A 366 GNIANINRPGVLLDSTGRIVSKSHPQYTGYAP------------------------SDFVSVRSQGAKGDGHTDDTQAIK 421 (758)
T ss_dssp EECSCCCCCGGGBCTTSSBCCCCCCCCTTCCG------------------------GGEEETTTTTCCCEEEEECHHHHH
T ss_pred ccccCCCCChHHhccCCceeecCCCccccccc------------------------cceEEeeeccccCCCCchhHHHHH
Confidence 4445677777776 58999999999998544 599999999999999999999999
Q ss_pred HHHHHHhhcCCcEEEEcCCeEEEeeeeeeecccCCceEEeeee--eecCCCCCCcccccCCcceeEEE---eeeeceEEe
Q 040748 211 MTWDSACQKDFAVIHVPYGFSFMIQSTIFTGPCQGSIVFQVDG--TIMPPDGPESWLQKNSKRQWLVF---YKINELSLQ 285 (584)
Q Consensus 211 ~Ai~~a~~~~g~~v~~p~G~tY~i~~~~ltgp~ksnvtL~l~G--tL~~s~~~~~~~~~~~~~~lI~~---~~~~NVtI~ 285 (584)
+||+++ ..+++||||+| +|++++++.. ++++.|..++ +|++.. ..|.......+++.. .+...|.|.
T Consensus 422 ~al~aa--~~g~~v~~P~G-~Y~vt~Ti~i---p~~~~ivG~~~~~I~~~G--~~F~d~~~P~pvv~VG~~gd~G~veis 493 (758)
T 3eqn_A 422 NVFAKY--AGCKIIFFDAG-TYIVTDTIQI---PAGTQIVGEVWSVIMGTG--SKFTDYNNPQPVIQVGAPGSSGVVEIT 493 (758)
T ss_dssp HHHHHH--TTTSEEECCSE-EEEESSCEEE---CTTCEEECCSSEEEEECS--GGGCCTTSCEEEEEESCTTCBSCEEEE
T ss_pred HHHHHh--cCCCEEEECCC-EeEECCeEEc---CCCCEEEecccceEecCC--ccccCCCCCeeeEEeCCCCCCCeEEEE
Confidence 999954 35789999999 7999875543 6889888875 565532 334333233444544 234466666
Q ss_pred c
Q 040748 286 G 286 (584)
Q Consensus 286 G 286 (584)
|
T Consensus 494 d 494 (758)
T 3eqn_A 494 D 494 (758)
T ss_dssp S
T ss_pred e
Confidence 6
No 33
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=99.53 E-value=2.4e-13 Score=143.87 Aligned_cols=231 Identities=11% Similarity=0.119 Sum_probs=160.7
Q ss_pred CceEEEecc----cccCCCCcchHHHHHHHHHHHhh-------cCCcEEEEcCCeEEEe-eeeeeecccCCceEEeeee-
Q 040748 187 GNVIDVRKF----GAVGDGISDDTEAFKMTWDSACQ-------KDFAVIHVPYGFSFMI-QSTIFTGPCQGSIVFQVDG- 253 (584)
Q Consensus 187 ~~~~~v~~~----GA~gdg~tDdT~Aiq~Ai~~a~~-------~~g~~v~~p~G~tY~i-~~~~ltgp~ksnvtL~l~G- 253 (584)
...|||+.| +|+||+.+|+.++|+++|+++.+ ..|++|+||+| +|.+ +.+++. |+.++|...+
T Consensus 12 ~~~~~vt~~~~~~~~~~~~~~d~~~~i~~~ia~~~~~~~~~~A~pGdvI~L~~G-~Y~l~g~ivId---kp~LtL~G~~~ 87 (410)
T 2inu_A 12 PNTYDVTTWRIKAHPEVTAQSDIGAVINDIIADIKQRQTSPDARPGAAIIIPPG-DYDLHTQVVVD---VSYLTIAGFGH 87 (410)
T ss_dssp CCEEETTTCCBTTBTTCCHHHHHHHHHHHHHHHHHHHCCCTTSCCCEEEECCSE-EEEECSCEEEC---CTTEEEECSCC
T ss_pred CceEEEEEecccCCCcCCCchhHHHHHHHHHHHhhcccccccCCCCCEEEECCC-eeccCCcEEEe---cCcEEEEecCC
Confidence 589999999 89999999999999999998764 35999999999 7985 777774 4557887753
Q ss_pred -e----ecCCCCCCcccccCC------------cceeEEEee-----eeceEEecCeEEeCCCCccccCCCCCCCCCCCC
Q 040748 254 -T----IMPPDGPESWLQKNS------------KRQWLVFYK-----INELSLQGGGTIDGRGHKWWDLPCKPHKGINGT 311 (584)
Q Consensus 254 -t----L~~s~~~~~~~~~~~------------~~~lI~~~~-----~~NVtI~G~G~IDGnG~~ww~~~~~~~~g~~g~ 311 (584)
. |.+......|..... ....|.... .++|+|.| -+|+|-...-|-.
T Consensus 88 g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r~s~V~~~~-v~I~G~~~~~~G~----------- 155 (410)
T 2inu_A 88 GFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPRLSGIVFRD-FCLDGVGFTPGKN----------- 155 (410)
T ss_dssp CCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSCEECCEEES-CEEECCCCSSSTT-----------
T ss_pred CcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCcccCCcEECC-EEEECCEeecCCC-----------
Confidence 3 431111112221111 122222222 25555555 3444331111110
Q ss_pred CCCCCCCCCeeEEEEe-ecCceEeeeeEecCCCceeeeeccccEEEEeEEEECCCCCCCCCceeecC-cccEEEEceEEe
Q 040748 312 TSPGPCDSPIALRFFM-SSNLTVQRLRIKDSPQFHFRFDNCKNVHIESIHITAPALSPNTDGIHIEN-TNGVEIYNSVIS 389 (584)
Q Consensus 312 ~~~g~~~rP~~I~f~~-s~nvtI~gvti~ns~~~~I~i~~s~nV~I~nv~I~~~~~~~ntDGI~i~~-S~nV~I~n~~i~ 389 (584)
.+ ...-..|.+.. +++++|+++.|.+ ..++|.+..+++++|++..|.. ...||++++ ++...|+++.+.
T Consensus 156 s~---~~~dAGI~v~~~~d~~~I~nn~i~~-~~fGI~l~~a~~~~I~~N~I~e-----~GNgI~L~G~~~~~~I~~N~i~ 226 (410)
T 2inu_A 156 SY---HNGKTGIEVASDNDSFHITGMGFVY-LEHALIVRGADALRVNDNMIAE-----CGNCVELTGAGQATIVSGNHMG 226 (410)
T ss_dssp SC---CCSCEEEEECSCEESCEEESCEEES-CSEEEEETTEESCEEESCEEES-----SSEEEEECSCEESCEEESCEEE
T ss_pred Cc---ccCceeEEEeccCCeEEEECCEEec-ccEEEEEccCCCcEEECCEEEe-----cCCceeeccccccceEecceee
Confidence 00 01223577765 8899999999988 6799999999999999999995 346899998 889999999999
Q ss_pred cCCCc--EEeCCCceeEEEEeccc-CCC-CcceeeccCCCCCCCcEEeEEEEeeEEecCCceEEEEe
Q 040748 390 NGDDC--VSIGSGCYDVDIRNITC-GPG-HGISIGSLGNHNSRACVSNITVRDSVIKVSNNGVRIKT 452 (584)
Q Consensus 390 ~gDDg--Iai~sgs~NV~I~Nc~~-~~g-~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~~GI~Iks 452 (584)
.++|| |.+.. +.+.+|+++.+ ..+ .||.+- .+.+..|+++.|.+...|+.+..
T Consensus 227 ~~~dG~gIyl~n-s~~~~I~~N~i~~~~R~gIh~m---------~s~~~~i~~N~f~~~~~Gi~~M~ 283 (410)
T 2inu_A 227 AGPDGVTLLAEN-HEGLLVTGNNLFPRGRSLIEFT---------GCNRCSVTSNRLQGFYPGMLRLL 283 (410)
T ss_dssp CCTTSEEEEEES-EESCEEESCEECSCSSEEEEEE---------SCBSCEEESCEEEESSSCSEEEE
T ss_pred ecCCCCEEEEEe-CCCCEEECCCcccCcceEEEEE---------ccCCCEEECCEEecceeEEEEEE
Confidence 99998 77755 67788888866 445 677762 23567889999998888887655
No 34
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.46 E-value=1.4e-12 Score=141.91 Aligned_cols=158 Identities=15% Similarity=0.115 Sum_probs=119.0
Q ss_pred EeecCceEeeee---EecCC------CceeeeeccccEEEEeEEEECCCCCCCCCceeecCcccEEEEceEEecCCCcEE
Q 040748 326 FMSSNLTVQRLR---IKDSP------QFHFRFDNCKNVHIESIHITAPALSPNTDGIHIENTNGVEIYNSVISNGDDCVS 396 (584)
Q Consensus 326 ~~s~nvtI~gvt---i~ns~------~~~I~i~~s~nV~I~nv~I~~~~~~~ntDGI~i~~S~nV~I~n~~i~~gDDgIa 396 (584)
.+.+|++|.|-- +.+.. ...|.+..|+|++|++++|.+. | .+..|.+|.+. +.||+.
T Consensus 106 ~~~~nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~--w------~ih~s~~V~i~------NtDGi~ 171 (464)
T 1h80_A 106 NIVRNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDN--K------TIFASILVDVT------ERNGRL 171 (464)
T ss_dssp SCEEEEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECC--S------CBSCSEEECEE------EETTEE
T ss_pred cCccceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEecc--c------eEeeceeeeee------cCCCce
Confidence 457777777752 33322 1247889999999999999983 2 13344444443 367888
Q ss_pred eCCCceeEEEEecccCCCC-cceeeccCCCCCCCcEEeEEEEeeEEecCCceEEEEee-----cCCCCeEEeEEEEceEE
Q 040748 397 IGSGCYDVDIRNITCGPGH-GISIGSLGNHNSRACVSNITVRDSVIKVSNNGVRIKTW-----QGGSGAVSGITFSNIHM 470 (584)
Q Consensus 397 i~sgs~NV~I~Nc~~~~g~-GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~~GI~Iks~-----~g~~G~V~NItf~NI~i 470 (584)
+ .++||+|+||+|.+++ ++. +. ....++||+|+||+|.+ ..||+|+++ .+..|.++||+|+|++|
T Consensus 172 i--~s~nV~I~n~~I~~gddgiG--s~----~~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~ 242 (464)
T 1h80_A 172 H--WSRNGIIERIKQNNALFGYG--LI----QTYGADNILFRNLHSEG-GIALRMETDNLLMKNYKQGGIRNIFADNIRC 242 (464)
T ss_dssp E--EEEEEEEEEEEEESCCTTCE--EE----EESEEEEEEEEEEEEES-SEEEEEECCCHHHHHHTCCEEEEEEEEEEEE
T ss_pred e--eccCEEEeceEEecCCCeEE--ec----ccCCEeEEEEEeeEEEC-CCEEEEEeCCceeccCCCCcEEEEEEEeEEE
Confidence 7 5799999999999875 563 22 24679999999999999 889999997 55678999999999999
Q ss_pred cCCcccEEEEEeecCCCCCCCCCCCeeEEeEEEEeEEEeecCCCCCeEEe
Q 040748 471 NNVRNPIIIDQYYCLTKDCTNKTSAVYVSDILYSNIKGTYDIRSPPMHFA 520 (584)
Q Consensus 471 ~~v~~~I~I~~~y~~~~~~~~~~~~~~I~nItf~NI~gt~~~~~~~i~i~ 520 (584)
+++.++|.|+. ....++||+|+||+++... .++.+.
T Consensus 243 ~nv~~~I~I~p------------~~~~isnItfeNI~~t~~~--~aI~i~ 278 (464)
T 1h80_A 243 SKGLAAVMFGP------------HFMKNGDVQVTNVSSVSCG--SAVRSD 278 (464)
T ss_dssp ESSSEEEEEEC------------TTCBCCCEEEEEEEEESSS--CSEEEC
T ss_pred ECCceeEEEeC------------CCceEeEEEEEEEEEEccc--eeEEEe
Confidence 99999999972 1246899999999999753 356554
No 35
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.34 E-value=1.1e-10 Score=129.42 Aligned_cols=226 Identities=16% Similarity=0.148 Sum_probs=148.9
Q ss_pred CcceeEEEeeeeceEEecCeEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCeeEEEEeecCceEeeeeEecCCCceeee
Q 040748 269 SKRQWLVFYKINELSLQGGGTIDGRGHKWWDLPCKPHKGINGTTSPGPCDSPIALRFFMSSNLTVQRLRIKDSPQFHFRF 348 (584)
Q Consensus 269 ~~~~lI~~~~~~NVtI~G~G~IDGnG~~ww~~~~~~~~g~~g~~~~g~~~rP~~I~f~~s~nvtI~gvti~ns~~~~I~i 348 (584)
.++.+|.+.+++|+.|+|.-+.+... .+++|..-.. | .++++
T Consensus 132 ~RP~lI~f~~c~NV~I~gVti~NSp~----------------------------------~gI~I~~~~~-N---DGid~ 173 (609)
T 3gq8_A 132 SRESNLSIRACHNVYIRDIEAVDCTL----------------------------------HGIDITCGGL-D---YPYLG 173 (609)
T ss_dssp TTTCSEEEESCEEEEEEEEEEESCSS----------------------------------CSEEEECSSS-S---CCCCC
T ss_pred CCccEEEEEeeceEEEEeeEEEeCCC----------------------------------CCeEEeCCCC-C---ccccC
Confidence 35678999999999999943332110 1122221111 1 34555
Q ss_pred ec------cccEEEEeEEEECCCCCCCCCceeecCcccEEEEceEEecC-----CCcEEeCCCceeEEEEecccCCC-Cc
Q 040748 349 DN------CKNVHIESIHITAPALSPNTDGIHIENTNGVEIYNSVISNG-----DDCVSIGSGCYDVDIRNITCGPG-HG 416 (584)
Q Consensus 349 ~~------s~nV~I~nv~I~~~~~~~ntDGI~i~~S~nV~I~n~~i~~g-----DDgIai~sgs~NV~I~Nc~~~~g-~G 416 (584)
+. |+||+|+||+|.+. ..|||.+.+|+||+|+||++... ..||.++++++||+|+||++.++ .|
T Consensus 174 DGi~fd~~S~NV~I~Nc~I~~t----GDDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~Nc~i~nt~~G 249 (609)
T 3gq8_A 174 DGTTAPNPSENIWIENCEATGF----GDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGG 249 (609)
T ss_dssp TTCCCSSCCEEEEEESCEEESC----SSCSEEECSCEEEEEESCEEECCSSCSSCCSEEECTTCEEEEEESEEEESSSEE
T ss_pred CCccccccceeEEEEeeEEEec----CCCEEEecCCeeEEEEeEEEECCCCCCCcccEEccCCcccEEEEeeEEECCCCE
Confidence 55 99999999999762 46899999999999999999543 57899988889999999999987 68
Q ss_pred ceeeccCCCCCCCcEEeEEEEeeEEecCCc--eEEEEeecC----CCCeEEeEEEEceEEcCCc-----------ccEEE
Q 040748 417 ISIGSLGNHNSRACVSNITVRDSVIKVSNN--GVRIKTWQG----GSGAVSGITFSNIHMNNVR-----------NPIII 479 (584)
Q Consensus 417 I~IGS~g~~~~~~~v~nI~I~Nit~~~s~~--GI~Iks~~g----~~G~V~NItf~NI~i~~v~-----------~~I~I 479 (584)
|.|++.. ....++||+|.|+...+.-. .++...... .....+||.++|++...-. +++++
T Consensus 250 IrIKt~~---~~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a~dp~s~~a~nV~l~n~~~~~p~~~~~~y~~~~~r~l~v 326 (609)
T 3gq8_A 250 IEIKAHG---DAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVLAV 326 (609)
T ss_dssp EEEEECT---TSCCCEEEEEEEEEEESCSEEEEEEETTSCSTTSCCCSSCEEEEEEEEEEESCCCTTCHHHHCCCEEEEE
T ss_pred EEEEecC---CCCccccEEEECCEeecCceEecceEEccccCCCCCcceecceEeecceEEeecccCceeeCCCcceEEE
Confidence 9998764 35689999999987765433 444322221 2235788888888875321 24444
Q ss_pred EEe----------ecCCCCCCCCCCCe----eEEeEEEEeEEEeecCC-CCCeEEecCCCCceecEEEEeEEEEcCC
Q 040748 480 DQY----------YCLTKDCTNKTSAV----YVSDILYSNIKGTYDIR-SPPMHFACSDTVPCTNLTLSEVELLPAK 541 (584)
Q Consensus 480 ~~~----------y~~~~~~~~~~~~~----~I~nItf~NI~gt~~~~-~~~i~i~~~~~~~~~nItf~NI~i~~~~ 541 (584)
..+ +++...-.. .+.. .-+||+|.||++++-.. ...+++.+.+ ..+..|.++|+.|....
T Consensus 327 s~~~~v~i~~~~~~~d~~y~~~-~~~~~~q~~~~~~~l~~~~i~gf~~a~~~i~~~gg~-~~~~~v~i~n~~i~~s~ 401 (609)
T 3gq8_A 327 SAYYGVVINGLTGYTDDPNLLT-ETVVSVQFRARNCSLNGVVLTGFSNSENGIYVIGGS-RGGDAVNISNVTLNNSG 401 (609)
T ss_dssp ESCEEEEEEEEEEECSCTTSCC-SEEEEEETTCEEEEEEEEEEESCTTCSEEEEECCCC-CTTCCEEEEEEEEESCC
T ss_pred EcCCCeEEcCceEccCCccccC-CceEEEEEecceeEEcceEEecccCCCCCeEEeCCC-CcCCeEEEeccEEeecc
Confidence 332 111110001 1222 23799999999886633 2246665544 46889999999997443
No 36
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=99.31 E-value=1.5e-10 Score=130.63 Aligned_cols=243 Identities=16% Similarity=0.116 Sum_probs=154.3
Q ss_pred CcceeEEEeeeeceEEecCeEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCeeEEEEeecCceEeeeeEecCCC-ceee
Q 040748 269 SKRQWLVFYKINELSLQGGGTIDGRGHKWWDLPCKPHKGINGTTSPGPCDSPIALRFFMSSNLTVQRLRIKDSPQ-FHFR 347 (584)
Q Consensus 269 ~~~~lI~~~~~~NVtI~G~G~IDGnG~~ww~~~~~~~~g~~g~~~~g~~~rP~~I~f~~s~nvtI~gvti~ns~~-~~I~ 347 (584)
.++.+|.+.+++||.|+|.-+.+... ++++|.+... .+++
T Consensus 132 ~RP~lI~f~~ckNV~I~gVti~NSp~---------------------------------------~gI~I~np~~NDGid 172 (772)
T 3gqn_A 132 SRESNLSIRACHNVYIRDIEAVDCTL---------------------------------------HGIDITCGGLDYPYL 172 (772)
T ss_dssp TTTCSEEEESCEEEEEEEEEEESCSS---------------------------------------CSEEEECSSSSCCCC
T ss_pred CCccEEEEEeeceEEEEeEEEEeCCC---------------------------------------CCEEEeCCCcCCcCC
Confidence 35678999999999999943332110 1222222111 3455
Q ss_pred eec------cccEEEEeEEEECCCCCCCCCceeecCcccEEEEceEEecC-----CCcEEeCCCceeEEEEecccCCC-C
Q 040748 348 FDN------CKNVHIESIHITAPALSPNTDGIHIENTNGVEIYNSVISNG-----DDCVSIGSGCYDVDIRNITCGPG-H 415 (584)
Q Consensus 348 i~~------s~nV~I~nv~I~~~~~~~ntDGI~i~~S~nV~I~n~~i~~g-----DDgIai~sgs~NV~I~Nc~~~~g-~ 415 (584)
++. |+||.|+||+|.+. ..|+|.+.+|+||+|+||++... ..||.++++++||+|+||++.++ .
T Consensus 173 ~DGi~fdi~S~NV~I~Nc~I~nt----GDDcIAIksSeNI~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~Nc~~~nT~n 248 (772)
T 3gqn_A 173 GDGTTAPNPSENIWIENCEATGF----GDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYG 248 (772)
T ss_dssp CTTCCCSSCCEEEEEESCEEESC----SSCSEEECSCEEEEEESCEEECCSSSSSCCSEEECTTCEEEEEEEEEEESSSE
T ss_pred CcCcccccccceEEEEeeEEEec----CcCeEEecCCceEEEEeEEEECCCCCCCcccEEecCCcccEEEEceEEECCCc
Confidence 555 99999999999762 45899999999999999999543 57899998889999999999987 6
Q ss_pred cceeeccCCCCCCCcEEeEEEEeeEEecCCc--eEEEEeecC----CCCeEEeEEEEceEEcCCc-----------ccEE
Q 040748 416 GISIGSLGNHNSRACVSNITVRDSVIKVSNN--GVRIKTWQG----GSGAVSGITFSNIHMNNVR-----------NPII 478 (584)
Q Consensus 416 GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~~--GI~Iks~~g----~~G~V~NItf~NI~i~~v~-----------~~I~ 478 (584)
||.|++.+ +.+.++||+|.++...+... .++...... ..-...||.+.|++...-. ++++
T Consensus 249 GIRIKt~~---~gg~v~NV~I~gnis~~dvrsynir~iG~h~a~dp~s~~a~nV~l~n~~~~~P~~~~~ly~~~~praL~ 325 (772)
T 3gqn_A 249 GIEIKAHG---DAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVLA 325 (772)
T ss_dssp EEEECCCT---TSCCCEEEEEEEEEEESCSEEEEECCTTSCSSSSCCCSSCEEEEEEEEEEESCCCSSCHHHHCCCEEEE
T ss_pred EEEEEEeC---CCCccccEEEECCEEeccCeEecceEEccccCCCCCCccCccEEeecceEEcccccCceeeCCCcceEE
Confidence 89998754 45679999999766554333 333221111 1124688888888775321 2344
Q ss_pred EEEe----------ecCCCCCCCCCCCe----eEEeEEEEeEEEeecCC-CCCeEEecCCCCceecEEEEeEEEEcCCC-
Q 040748 479 IDQY----------YCLTKDCTNKTSAV----YVSDILYSNIKGTYDIR-SPPMHFACSDTVPCTNLTLSEVELLPAKG- 542 (584)
Q Consensus 479 I~~~----------y~~~~~~~~~~~~~----~I~nItf~NI~gt~~~~-~~~i~i~~~~~~~~~nItf~NI~i~~~~g- 542 (584)
+..+ ++....-.. .+.. .-+||+|.||++++-.. ...+++.+.+ ..+..|.++|+.|.....
T Consensus 326 vsay~~v~i~~~~~igd~~y~~~-~~~i~~q~~~~~~~ln~i~i~gf~~a~~~i~v~gg~-~~~~~v~i~n~~i~~s~~~ 403 (772)
T 3gqn_A 326 VSAYYGVVINGLTGYTDDPNLLT-ETVVSVQFRARNCSLNGVVLTGFSNSENGIYVIGGS-RGGDAVNISNVTLNNSGRY 403 (772)
T ss_dssp EESCEEEEEEEEEEECSCTTSCC-SEEEEEETTCEEEEEEEEEEESCTTCSEEEEECCST-TCCEEEEEEEEEEESCCSE
T ss_pred EEcCCCcEecCceeccCcccccC-CceEEEEEecceeEEcceEEecccCCCCCeEEeCCC-CCCCeEEEeccEEeecccc
Confidence 4332 111100001 1222 23799999999886633 2246665544 568999999999974332
Q ss_pred -----CccccceeecceecCCc
Q 040748 543 -----DLVSDPFCWNAYGDLPT 559 (584)
Q Consensus 543 -----~~~~~~~c~nv~G~~~~ 559 (584)
..+......|+......
T Consensus 404 gi~~g~~~~~~~~~n~~~~~~~ 425 (772)
T 3gqn_A 404 GVSIGSGIENVSITNISGIGDG 425 (772)
T ss_dssp EEEECTTCCCEEEEEEEEECTT
T ss_pred cEEecCceeEEEEEeeEEEccC
Confidence 23444556666655543
No 37
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.28 E-value=1.4e-10 Score=122.36 Aligned_cols=193 Identities=13% Similarity=0.070 Sum_probs=138.3
Q ss_pred EEEEee-cCceEeeeeEecCCCceeeeeccccEEEEeEEEECCCCCCCCCceeecC-cccEEEEceEEecCCCcEEeC--
Q 040748 323 LRFFMS-SNLTVQRLRIKDSPQFHFRFDNCKNVHIESIHITAPALSPNTDGIHIEN-TNGVEIYNSVISNGDDCVSIG-- 398 (584)
Q Consensus 323 I~f~~s-~nvtI~gvti~ns~~~~I~i~~s~nV~I~nv~I~~~~~~~ntDGI~i~~-S~nV~I~n~~i~~gDDgIai~-- 398 (584)
|.+..| .+++++++.+.+....+|.+..|++++|+++++.. .+.|||++.. |++++|+++.+...++|+.+.
T Consensus 151 i~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~~----~~~~GI~~~~~s~~v~I~nN~i~~~~~g~~~~~~ 226 (377)
T 2pyg_A 151 FDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYA----NDRHGFNVVTSTHDFVMTNNVAYGNGSSGLVVQR 226 (377)
T ss_dssp EEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEES----CSSCSEEEETTCEEEEEESCEEESCSSCSEEEEC
T ss_pred EEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEEc----cccCcEEEEeccCCeEEECCEEECccCceEEEec
Confidence 555654 47899999998888899999999999999997776 3689999876 999999999999988888772
Q ss_pred -----CCceeEEEEecccCC--CCcceeeccCCCCCCCcEEeEEEEeeEEecC-CceEEEEeecCCCCeEEeEEEEceEE
Q 040748 399 -----SGCYDVDIRNITCGP--GHGISIGSLGNHNSRACVSNITVRDSVIKVS-NNGVRIKTWQGGSGAVSGITFSNIHM 470 (584)
Q Consensus 399 -----sgs~NV~I~Nc~~~~--g~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s-~~GI~Iks~~g~~G~V~NItf~NI~i 470 (584)
..+++++|++|++++ .+|+.+. .+++++|+|+++.++ ..||+|+. +++++|+|++|
T Consensus 227 g~~~~~~s~nv~i~~N~~~~n~~~Gi~~~---------~~~~v~i~~N~i~~~~~~GI~i~g-------~~~~~i~~N~i 290 (377)
T 2pyg_A 227 GLEDLALPSNILIDGGAYYDNAREGVLLK---------MTSDITLQNADIHGNGSSGVRVYG-------AQDVQILDNQI 290 (377)
T ss_dssp CSSCCCCCEEEEEESCEEESCSSCSEEEE---------EEEEEEEESCEEESCSSCSEEEEE-------EEEEEEESCEE
T ss_pred cccCCCCCccEEEECCEEEcCccCceEec---------cccCeEEECCEEECCCCceEEEec-------CCCcEEECcEE
Confidence 357999999999886 4677763 378999999999988 78999984 78999999999
Q ss_pred cCCcc----cEEEEEeecCCC-CCCCCCCCeeEEeEEEEeEEEeecCC-CCCeEEecCCCCceecEEEEeEEEEcCC
Q 040748 471 NNVRN----PIIIDQYYCLTK-DCTNKTSAVYVSDILYSNIKGTYDIR-SPPMHFACSDTVPCTNLTLSEVELLPAK 541 (584)
Q Consensus 471 ~~v~~----~I~I~~~y~~~~-~~~~~~~~~~I~nItf~NI~gt~~~~-~~~i~i~~~~~~~~~nItf~NI~i~~~~ 541 (584)
.+... .+.+.+.|+... .+. ....-++++|++.+...... ...+.+.+ ..++++++++..|....
T Consensus 291 ~~n~~~~~~~~v~~~~~~~~~~~~~---~~~~~~~~~i~~N~i~g~~~~~~~i~~~~---~~~~~~~i~~n~i~~~~ 361 (377)
T 2pyg_A 291 HDNAQAAAVPEVLLQSFDDTAGASG---TYYTTLNTRIEGNTISGSANSTYGIQERN---DGTDYSSLIDNDIAGVQ 361 (377)
T ss_dssp ESCCSSSSCCSEEEECEEETTSSSC---EEECCBCCEEESCEEECCSSCCEEEEECS---SSCBCCEEESCEEESSS
T ss_pred ECCcccccccceEEEEecCCCccce---eeeeccCeEEECCEEECcCCCccceEEcc---CCCccEEEECcEEeCCc
Confidence 87643 222222233210 000 00001455555555544211 11333422 44678999999988765
No 38
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=99.23 E-value=6.8e-10 Score=122.80 Aligned_cols=231 Identities=12% Similarity=0.039 Sum_probs=151.2
Q ss_pred CCceEEeeeeeecCCCCCCcccccCC--cceeEEEeeeeceEEecCeEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCe
Q 040748 244 QGSIVFQVDGTIMPPDGPESWLQKNS--KRQWLVFYKINELSLQGGGTIDGRGHKWWDLPCKPHKGINGTTSPGPCDSPI 321 (584)
Q Consensus 244 ksnvtL~l~GtL~~s~~~~~~~~~~~--~~~lI~~~~~~NVtI~G~G~IDGnG~~ww~~~~~~~~g~~g~~~~g~~~rP~ 321 (584)
..+++|.+.|+|.+.. ..-|..... .++.|.+.+++ |+|.-+.+. +..|
T Consensus 149 ~~NItItG~GtIDGqG-~~wW~~~~~~~~RP~l~f~~c~---I~GITi~NS--DP~w----------------------- 199 (600)
T 2x6w_A 149 LENCHIYGHGVVDFGG-YEFGASSQLRNGVAFGRSYNCS---VTGITFQNG--DVTW----------------------- 199 (600)
T ss_dssp EEEEEEESSCEEECTT-CCCSSTTCCEEEEECCSEEEEE---EESCEEESC--CCSC-----------------------
T ss_pred ceeEEEecceeeeCCc-cccccccccCCCCCEEEEeeeE---EeCeEEECC--CCcc-----------------------
Confidence 3567777778887632 223432111 12234455554 777544432 1222
Q ss_pred eEEE---EeecCceEeeee----EecCCC-ceeeeeccccEEEEeEEEECCCCCCCCCceee-cCcc--cEEEEceEEec
Q 040748 322 ALRF---FMSSNLTVQRLR----IKDSPQ-FHFRFDNCKNVHIESIHITAPALSPNTDGIHI-ENTN--GVEIYNSVISN 390 (584)
Q Consensus 322 ~I~f---~~s~nvtI~gvt----i~ns~~-~~I~i~~s~nV~I~nv~I~~~~~~~ntDGI~i-~~S~--nV~I~n~~i~~ 390 (584)
.+.+ ..|+||+|++|+ |.+++. .+| |+|+|+.|.+. .|+|.+ .+.+ ++.++ .+..
T Consensus 200 ~I~iG~~~~c~NVtI~nvtfi~aI~sspNTDGI-------V~I~nc~I~tG-----DDCIAI~KSGs~~ni~~e--~~~~ 265 (600)
T 2x6w_A 200 AITLGWNGYGSNCYVRKCRFINLVNSSVNADHS-------TVYVNCPYSGV-----ESCYFSMSSSFARNIACS--VQLH 265 (600)
T ss_dssp SEEECBTTBEEEEEEESCEEECCCCCSSCCCEE-------EEEECSSSEEE-----ESCEEECCCTTHHHHEEE--EEEC
T ss_pred EEEeCCCCCcccEEEeCeEEcceEecCCCCCEE-------EEEEeeEEecC-----CcEEEEecCCCcCCeEEE--EEcC
Confidence 4788 899999999999 766332 344 88999998874 578999 6433 46777 5667
Q ss_pred CCCcEEeCC----CceeEEEEecccCCCCcceeeccCCCCCCCcEEeEEEEeeEEecCCceEEEEeec--CCCCeEEeEE
Q 040748 391 GDDCVSIGS----GCYDVDIRNITCGPGHGISIGSLGNHNSRACVSNITVRDSVIKVSNNGVRIKTWQ--GGSGAVSGIT 464 (584)
Q Consensus 391 gDDgIai~s----gs~NV~I~Nc~~~~g~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~~GI~Iks~~--g~~G~V~NIt 464 (584)
++.||++++ +.+||+|+| ++.... ++.+.++||+|+|++|.+...++.+.... ...+.|+||+
T Consensus 266 GHgGISIGSe~~ggV~NV~V~N-rIKt~~----------G~GG~V~NItfeNI~m~nV~~~I~i~q~~~~~s~~~IsnIt 334 (600)
T 2x6w_A 266 QHDTFYRGSTVNGYCRGAYVVM-HAAEAA----------GAGSYAYNMQVENNIAVIYGQFVILGSDVTATVSGHLNDVI 334 (600)
T ss_dssp SSSEEEESCEEEEESEEEEEEE-CGGGCT----------TTCSEEEEEEEESCEEEESSEEEEEEECBCSSCBCEEEEEE
T ss_pred CCCcEEecccccCcEEEEEEEE-EEEeec----------CCCceEEEEEEEEEEEEccceEEEeCCCCCCCCCceEEEEE
Confidence 888999987 358899998 443222 13578999999999999998888887642 2356899999
Q ss_pred EEceEEcCCcc-------cEEEEEeecCCCCCCCCCCCeeEEeEEEEeEEEeecCCC---CCeEEecCCCCceecEEEEe
Q 040748 465 FSNIHMNNVRN-------PIIIDQYYCLTKDCTNKTSAVYVSDILYSNIKGTYDIRS---PPMHFACSDTVPCTNLTLSE 534 (584)
Q Consensus 465 f~NI~i~~v~~-------~I~I~~~y~~~~~~~~~~~~~~I~nItf~NI~gt~~~~~---~~i~i~~~~~~~~~nItf~N 534 (584)
|+||+.+.... +.+|..... .|. ......|++|+|+|++....... +++.+ ...+++|+|.+
T Consensus 335 fkNItgTsas~aav~~~~g~~i~g~p~---~~~-~~~~~~Ie~V~~~~~~~~~~~~~~~~~~~~~----~~~~~g~~~~~ 406 (600)
T 2x6w_A 335 VSGNIVSIGERAAFSAPFGAFIDIGPD---NSG-ASNVQDIQRVLVTGNSFYAPANITDSAAITL----RANLNGCTFIA 406 (600)
T ss_dssp EESCEEEECSCCTTSSSCEEEEEECCC---TTC-CSSSCCEEEEEEESCEEECCTTCSSEEEEEE----CSCBSCEEEES
T ss_pred EEeEEEEeccccccccccceEEEecCc---ccc-cccccceeEEEEeceEEEcCCccCCCcceee----eccccceEEec
Confidence 99999986432 245554322 222 23567899999999998653211 11222 34577888887
Q ss_pred EE
Q 040748 535 VE 536 (584)
Q Consensus 535 I~ 536 (584)
=.
T Consensus 407 ~~ 408 (600)
T 2x6w_A 407 NN 408 (600)
T ss_dssp CE
T ss_pred Cc
Confidence 66
No 39
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=99.05 E-value=1.3e-08 Score=109.08 Aligned_cols=242 Identities=15% Similarity=0.114 Sum_probs=151.0
Q ss_pred CceEEEecccc-cCCC-Cc-chHHHHHHHHHHHhhcCCcEEEEcCCeEEE--ee-----eeeeecccCCc-----eEEee
Q 040748 187 GNVIDVRKFGA-VGDG-IS-DDTEAFKMTWDSACQKDFAVIHVPYGFSFM--IQ-----STIFTGPCQGS-----IVFQV 251 (584)
Q Consensus 187 ~~~~~v~~~GA-~gdg-~t-DdT~Aiq~Ai~~a~~~~g~~v~~p~G~tY~--i~-----~~~ltgp~ksn-----vtL~l 251 (584)
+..+.|..-|- .++| .. ... .||+|++.|. .|.+|+|.+| +|. +. .+.+. +++ ++|+.
T Consensus 14 ~~~~yVsp~Gsd~~~G~t~~~P~-tiq~Ai~~a~--pGdtI~l~~G-tY~~~~~e~~~~~i~~~---~sGt~~~pIti~~ 86 (400)
T 1ru4_A 14 KRIYYVAPNGNSSNNGSSFNAPM-SFSAAMAAVN--PGELILLKPG-TYTIPYTQGKGNTITFN---KSGKDGAPIYVAA 86 (400)
T ss_dssp SCEEEECTTCCTTCCSSSTTSCB-CHHHHHHHCC--TTCEEEECSE-EEECCCBTTBCCCEEEC---CCCBTTBCEEEEE
T ss_pred ccEEEEcCCCCCCCCCccccCCc-cHHHHHhhCC--CCCEEEECCC-eEccccccccceeEEec---CCCCCCCCEEEEE
Confidence 35677766553 2344 21 123 7999999753 5899999999 898 32 23332 333 66665
Q ss_pred ee----eecCCCCC-CcccccCCcceeEEEeeeeceEEecCeEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCeeEEEE
Q 040748 252 DG----TIMPPDGP-ESWLQKNSKRQWLVFYKINELSLQGGGTIDGRGHKWWDLPCKPHKGINGTTSPGPCDSPIALRFF 326 (584)
Q Consensus 252 ~G----tL~~s~~~-~~~~~~~~~~~lI~~~~~~NVtI~G~G~IDGnG~~ww~~~~~~~~g~~g~~~~g~~~rP~~I~f~ 326 (584)
.+ +|. .... ..|... ..-|.. ..+.++|+|. .|...+ .+ .|.+.
T Consensus 87 ~~g~~~vI~-~~~~~g~~~~~---~~~i~i-~~~~~~i~gl-~I~n~g-----------------------~~--GI~v~ 135 (400)
T 1ru4_A 87 ANCGRAVFD-FSFPDSQWVQA---SYGFYV-TGDYWYFKGV-EVTRAG-----------------------YQ--GAYVI 135 (400)
T ss_dssp GGGCCEEEE-CCCCTTCCCTT---CCSEEE-CSSCEEEESE-EEESCS-----------------------SC--SEEEC
T ss_pred ecCCCCEEe-CCccCCccccc---eeEEEE-ECCeEEEEeE-EEEeCC-----------------------CC--cEEEe
Confidence 42 233 1110 011100 011222 4556666662 221111 00 35555
Q ss_pred eecCceEeeeeEecCCCceeeeeccc-cEEEEeEEEECCCC----CCCCCceeecCc--ccEEEEceEEe-cCCCcEEeC
Q 040748 327 MSSNLTVQRLRIKDSPQFHFRFDNCK-NVHIESIHITAPAL----SPNTDGIHIENT--NGVEIYNSVIS-NGDDCVSIG 398 (584)
Q Consensus 327 ~s~nvtI~gvti~ns~~~~I~i~~s~-nV~I~nv~I~~~~~----~~ntDGI~i~~S--~nV~I~n~~i~-~gDDgIai~ 398 (584)
. .+.+|++++|.+....+|.+.... +.+|++++|....+ ..+.|||.++.+ ++.+|++|.+. +.||||.+.
T Consensus 136 g-s~~~i~n~~i~~n~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~ 214 (400)
T 1ru4_A 136 G-SHNTFENTAFHHNRNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDDGFDLF 214 (400)
T ss_dssp S-SSCEEESCEEESCSSCSEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSCSEECT
T ss_pred C-CCcEEEeEEEECCCceeEEEEcccCCeEEEceEEEcccCccccCcccceEEEEecccCCeEEECCEEeecCCCcEEEE
Confidence 4 788999999999887789988754 88999999988653 246799988643 78899999987 578999997
Q ss_pred CCceeEEEEecccCC--------------CCcceeeccCCCCCCCcEEeEEEEeeEEecC-CceEEEEeecCCCCeEEeE
Q 040748 399 SGCYDVDIRNITCGP--------------GHGISIGSLGNHNSRACVSNITVRDSVIKVS-NNGVRIKTWQGGSGAVSGI 463 (584)
Q Consensus 399 sgs~NV~I~Nc~~~~--------------g~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s-~~GI~Iks~~g~~G~V~NI 463 (584)
.....|+|+||..+. +.||.+|.++ ...+.+|+||...+. ..|+...... .++
T Consensus 215 ~~~~~v~i~nn~a~~Ng~~~~~~n~~~gngnGf~lgg~~------~~~~~~v~nn~a~~N~~~G~~~n~~~------~~~ 282 (400)
T 1ru4_A 215 DSPQKVVIENSWAFRNGINYWNDSAFAGNGNGFKLGGNQ------AVGNHRITRSVAFGNVSKGFDQNNNA------GGV 282 (400)
T ss_dssp TCCSCCEEESCEEESTTCCCSCCTTCCCCCCSEECCCTT------CCCCCEEESCEEESCSSEEEECTTCS------SCC
T ss_pred ecCCCEEEEeEEEECCccccccccccccCCCCEEEeccC------CcCCEEEEeeEEECCcCcCEeecCCC------CCE
Confidence 666778999997642 2357776542 345778999988865 3477553221 236
Q ss_pred EEEceEEcCCcccEEE
Q 040748 464 TFSNIHMNNVRNPIII 479 (584)
Q Consensus 464 tf~NI~i~~v~~~I~I 479 (584)
+|+|+++.+....+.+
T Consensus 283 ~i~nNt~~~N~~~~~~ 298 (400)
T 1ru4_A 283 TVINNTSYKNGINYGF 298 (400)
T ss_dssp EEESCEEESSSEEEEE
T ss_pred EEECeEEECCccceEE
Confidence 7888777665555554
No 40
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=98.65 E-value=8.1e-07 Score=97.61 Aligned_cols=277 Identities=7% Similarity=-0.019 Sum_probs=149.4
Q ss_pred hHHHHHHHHHHHhhcCCcEEEEcCCeEEEeeeeeeec--ccCCceEEeee--e--eecCCCCCCcccccCCcceeEEEee
Q 040748 205 DTEAFKMTWDSACQKDFAVIHVPYGFSFMIQSTIFTG--PCQGSIVFQVD--G--TIMPPDGPESWLQKNSKRQWLVFYK 278 (584)
Q Consensus 205 dT~Aiq~Ai~~a~~~~g~~v~~p~G~tY~i~~~~ltg--p~ksnvtL~l~--G--tL~~s~~~~~~~~~~~~~~lI~~~~ 278 (584)
+.+.||+|+++|. .|++|+|++| +|.-..+.+.+ --...++|... + +|.+. ..|.. .
T Consensus 30 ~~~~Lq~Ai~~A~--pGDtI~L~~G-tY~~~~i~i~~sGt~~~pItl~~~~~~~~vi~G~-------------~~l~i-~ 92 (506)
T 1dbg_A 30 SNETLYQVVKEVK--PGGLVQIADG-TYKDVQLIVSNSGKSGLPITIKALNPGKVFFTGD-------------AKVEL-R 92 (506)
T ss_dssp SHHHHHHHHHHCC--TTCEEEECSE-EEETCEEEECCCCBTTBCEEEEESSTTSEEEEES-------------CEEEE-C
T ss_pred CHHHHHHHHHhCC--CCCEEEECCC-EEecceEEEecCCcCCCCEEEECCCCCccEEeCC-------------ceEEE-E
Confidence 5678999999653 4899999999 89754555421 00223444432 1 11110 01111 2
Q ss_pred eeceEEecCeEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCeeEEEEeecCceEeeeeEecCCCc-eeeee--------
Q 040748 279 INELSLQGGGTIDGRGHKWWDLPCKPHKGINGTTSPGPCDSPIALRFFMSSNLTVQRLRIKDSPQF-HFRFD-------- 349 (584)
Q Consensus 279 ~~NVtI~G~G~IDGnG~~ww~~~~~~~~g~~g~~~~g~~~rP~~I~f~~s~nvtI~gvti~ns~~~-~I~i~-------- 349 (584)
.++++|+|.- |.+.+...... .. ..+..+.+. .++++|++++|.+...- .+.+.
T Consensus 93 g~~v~i~GL~-i~~~~~~~~~~--------~~-------~~~~~iav~-G~~~~I~nn~I~~~~~gd~i~i~~~~~~~~l 155 (506)
T 1dbg_A 93 GEHLILEGIW-FKDGNRAIQAW--------KS-------HGPGLVAIY-GSYNRITACVFDCFDEANSAYITTSLTEDGK 155 (506)
T ss_dssp SSSEEEESCE-EEEECCCTTTC--------CT-------TSCCSEEEC-SSSCEEESCEEESCCSSCSCSEEECCCTTCC
T ss_pred cCCEEEECeE-EECCCcceeee--------ec-------ccccceEEe-cCCeEEEeeEEEcCCCCceeeEeecccceee
Confidence 3566666632 22211100000 00 001123333 58899999999886331 02232
Q ss_pred ccccEEEEeEEEECCCCCCCCC----ceeecC-------cccEEEEceEEec------CCCcEEeCC---CceeEEEEec
Q 040748 350 NCKNVHIESIHITAPALSPNTD----GIHIEN-------TNGVEIYNSVISN------GDDCVSIGS---GCYDVDIRNI 409 (584)
Q Consensus 350 ~s~nV~I~nv~I~~~~~~~ntD----GI~i~~-------S~nV~I~n~~i~~------gDDgIai~s---gs~NV~I~Nc 409 (584)
..++.+|++++|.......... ||+++. +.+.+|+++.|.. +-+.|.++. .+.+.+|+|+
T Consensus 156 ~g~~n~I~~N~I~Gk~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~~~~~~~N~~e~iR~G~h~m~s~~~~VenN 235 (506)
T 1dbg_A 156 VPQHCRIDHCSFTDKITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCFFSNPQKPGNAGGGIRIGYYRNDIGRCLVDSN 235 (506)
T ss_dssp CCCSCEEESCEEECCCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCEEEECCCSSSCCCSEEECSSTTCBCCCEEESC
T ss_pred eccccEEECcEEECCcCcceEEecCceeEeccCcccccccCCeEEeCcEEcccccCCCccccEEEEEEecccCCcEEECC
Confidence 5667789999999864333333 888886 3689999999974 335566653 2578889999
Q ss_pred ccCCCC-cceeeccCCCCCCCcEEeEEEEeeEEecCCceEEEEeecCCCCeEEeEEEEceEEcCCc-----ccEEEEEee
Q 040748 410 TCGPGH-GISIGSLGNHNSRACVSNITVRDSVIKVSNNGVRIKTWQGGSGAVSGITFSNIHMNNVR-----NPIIIDQYY 483 (584)
Q Consensus 410 ~~~~g~-GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~~GI~Iks~~g~~G~V~NItf~NI~i~~v~-----~~I~I~~~y 483 (584)
+|...+ |..|-+.. ..+.+|+++++.++..+|.+.. + .+.+++++.|.+.. .+|+|.
T Consensus 236 ~f~~~~gg~aim~sk-------S~~n~i~~N~~~~~~ggi~l~~--~-----~~s~I~~N~f~gN~~~~~~~Gi~i~--- 298 (506)
T 1dbg_A 236 LFMRQDSEAEIITSK-------SQENVYYGNTYLNCQGTMNFRH--G-----DHQVAINNFYIGNDQRFGYGGMFVW--- 298 (506)
T ss_dssp EEEEECSSSEEEEEE-------SBSCEEESCEEESCSSEEEEEE--C-----SSCEEESCEEEECSSSSCBCCEEEC---
T ss_pred EEEeccCcEEEEEEe-------cCCEEEECCEEEcccCcEEEee--c-----CccEEECCEEECCcCccCceEEEEE---
Confidence 887654 33332110 1245899999998877777664 2 22345555554432 455552
Q ss_pred cCCCCCCCCCCCeeEEeEEEEeEEEeecCCCCCeEEe-cCC---CCceecEEEEeEEEEcCC
Q 040748 484 CLTKDCTNKTSAVYVSDILYSNIKGTYDIRSPPMHFA-CSD---TVPCTNLTLSEVELLPAK 541 (584)
Q Consensus 484 ~~~~~~~~~~~~~~I~nItf~NI~gt~~~~~~~i~i~-~~~---~~~~~nItf~NI~i~~~~ 541 (584)
. ....|+|=.|++..+........+.+. +.+ -..++++++.+=++-...
T Consensus 299 ~---------~~~~I~nN~f~~~~g~~~~~~~GI~i~~G~~~~~~~~~~~~~I~~Ntfi~n~ 351 (506)
T 1dbg_A 299 G---------SRHVIACNYFELSETIKSRGNAALYLNPGAMASEHALAFDMLIANNAFINVN 351 (506)
T ss_dssp S---------BSCEEESCEEEESSBCGGGTSEEEEECCBCTTSTTCCCBSEEEESCEEESCS
T ss_pred C---------CCCEEECCEEECCcCccccccccEEEecCCCccccccccCcEEECCEEECCc
Confidence 1 122666666666644101000134443 221 223566666665555443
No 41
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.40 E-value=3e-06 Score=88.94 Aligned_cols=128 Identities=15% Similarity=0.097 Sum_probs=91.8
Q ss_pred CceeeeeccccEEEEeEEEECCC------------------CCCCCCceeecCcccEEEEceEEecCCCcE-EeCCCcee
Q 040748 343 QFHFRFDNCKNVHIESIHITAPA------------------LSPNTDGIHIENTNGVEIYNSVISNGDDCV-SIGSGCYD 403 (584)
Q Consensus 343 ~~~I~i~~s~nV~I~nv~I~~~~------------------~~~ntDGI~i~~S~nV~I~n~~i~~gDDgI-ai~sgs~N 403 (584)
..+|.+..++||.|+|++|+... .....|||.+.++++|.|++|.|..+.|++ .++.++.+
T Consensus 105 G~gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~~~s~~ 184 (346)
T 1pxz_A 105 GPCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTG 184 (346)
T ss_dssp SCCEEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCEEEEEESCEEECCSSEEEEEESSCEE
T ss_pred cceEEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCceEEEEeeEEecCCCCcEeeccCcce
Confidence 36788889999999999998642 125789999999999999999999888876 57667899
Q ss_pred EEEEecccCCC-CcceeeccCCCCCCCcEEeEEEEeeEE-ecCC-ceEEEEeecCCCCeEEeEEEEceEEcCCc-ccEEE
Q 040748 404 VDIRNITCGPG-HGISIGSLGNHNSRACVSNITVRDSVI-KVSN-NGVRIKTWQGGSGAVSGITFSNIHMNNVR-NPIII 479 (584)
Q Consensus 404 V~I~Nc~~~~g-~GI~IGS~g~~~~~~~v~nI~I~Nit~-~~s~-~GI~Iks~~g~~G~V~NItf~NI~i~~v~-~~I~I 479 (584)
|+|+||+|..- .++-+|+.... ......+|+|+++.| .+.. +.-+++. ..+++.|+.+.+.. +++..
T Consensus 185 vTISnn~f~~H~k~~l~G~sd~~-~~d~~~~vT~~~N~f~~~~~~R~Pr~r~--------g~~hv~NN~~~~~~~~~i~~ 255 (346)
T 1pxz_A 185 ITISNNHFFNHHKVMLLGHDDTY-DDDKSMKVTVAFNQFGPNAGQRMPRARY--------GLVHVANNNYDPWNIYAIGG 255 (346)
T ss_dssp EEEESCEEESEEEEEEESCCSSC-GGGGGCEEEEESCEECSSEEECTTEEES--------SEEEEESCEECCCSSCSEEE
T ss_pred EEEEeeEEecCCceeEECCCCcc-ccCCceEEEEEeeEEeCCccccCccEec--------ceEEEEeeEEEcccceEEec
Confidence 99999999864 35667654221 112235899999999 5532 2223331 24778888887654 45444
No 42
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.32 E-value=3e-05 Score=81.08 Aligned_cols=120 Identities=17% Similarity=0.095 Sum_probs=76.3
Q ss_pred CCCceeecCcccEEEEceEEecCCC-cEEeCCCceeEEEEecccCCC-CcceeeccCCCC--CCCcEEeEEEEeeEEecC
Q 040748 369 NTDGIHIENTNGVEIYNSVISNGDD-CVSIGSGCYDVDIRNITCGPG-HGISIGSLGNHN--SRACVSNITVRDSVIKVS 444 (584)
Q Consensus 369 ntDGI~i~~S~nV~I~n~~i~~gDD-gIai~sgs~NV~I~Nc~~~~g-~GI~IGS~g~~~--~~~~v~nI~I~Nit~~~s 444 (584)
..|+|.+.++++|.|++|.+..+.| .+.++.++.+|+|+||.|... .++-+|..-... ......+|+|.+|.|.+.
T Consensus 115 ~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~~s~~vTISnn~f~~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~ 194 (340)
T 3zsc_A 115 DFDYINVENSHHIWIDHITFVNGNDGAVDIKKYSNYITVSWNKFVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNL 194 (340)
T ss_dssp CCCSEEEESCEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCSBCCEECCCTTSCHHHHHHSCEEEEESCEEESC
T ss_pred CCCeEEEecCCcEEEEeeeeccCCccceEEecCCceEEEECcEeccCceeeEeCcCCCCccccccCCcEEEEECeEecCC
Confidence 6799999999999999999986544 578877789999999999864 345555432100 000124789999999865
Q ss_pred C-ceEEEEeecCCCCeEEeEEEEceEEcC----------C-cccEEEEEeecCCCCCCCCCCCeeEEeEEEEeEE
Q 040748 445 N-NGVRIKTWQGGSGAVSGITFSNIHMNN----------V-RNPIIIDQYYCLTKDCTNKTSAVYVSDILYSNIK 507 (584)
Q Consensus 445 ~-~GI~Iks~~g~~G~V~NItf~NI~i~~----------v-~~~I~I~~~y~~~~~~~~~~~~~~I~nItf~NI~ 507 (584)
. +.-+++. | .+.+-|+.+.+ . .+++... ....+.+++=.|++..
T Consensus 195 ~~R~Pr~r~-----G---~~Hv~NN~~~n~~~~~~~~~~~~~yai~~~-----------~~a~i~~E~N~F~~~~ 250 (340)
T 3zsc_A 195 IQRMPRIRF-----G---MAHVFNNFYSMGLRTGVSGNVFPIYGVASA-----------MGAKVHVEGNYFMGYG 250 (340)
T ss_dssp CBCTTEEES-----S---EEEEESCEEECCCCCSCSSCCSCCEEEEEE-----------TTCEEEEESCEEECSC
T ss_pred CCCCCcccC-----C---eEEEEccEEECCccccccccceeeeeEecC-----------CCCEEEEECcEEECCC
Confidence 3 2223321 1 24566666655 2 2244332 1245677777777764
No 43
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.31 E-value=9.3e-06 Score=85.62 Aligned_cols=132 Identities=15% Similarity=0.181 Sum_probs=78.0
Q ss_pred ccccEEEEeEEEECC--CCCCCCCceeecCcccEEEEceEEec-CCCcEEe-CCCceeEEEEecccCCC-------C---
Q 040748 350 NCKNVHIESIHITAP--ALSPNTDGIHIENTNGVEIYNSVISN-GDDCVSI-GSGCYDVDIRNITCGPG-------H--- 415 (584)
Q Consensus 350 ~s~nV~I~nv~I~~~--~~~~ntDGI~i~~S~nV~I~n~~i~~-gDDgIai-~sgs~NV~I~Nc~~~~g-------~--- 415 (584)
.++||.|+|++|+.. ......|+|.+..+++|.|++|.+.. +|..+.. +.++.+|+|+||.|.+. .
T Consensus 131 ~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~~~~~s~~~~G~h 210 (359)
T 1idk_A 131 GAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYH 210 (359)
T ss_dssp TCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBCSCBTTSSSBB
T ss_pred CCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEecCCcccccccCccc
Confidence 455666666666542 11135689999999999999999874 5666654 44678999999999642 1
Q ss_pred --cceeeccCCCCCCCcEEeEEEEeeEEecCC-ceEEEEeecCCCCeEEeEEEEceEEcCC-cccEEEEEeecCCCCCCC
Q 040748 416 --GISIGSLGNHNSRACVSNITVRDSVIKVSN-NGVRIKTWQGGSGAVSGITFSNIHMNNV-RNPIIIDQYYCLTKDCTN 491 (584)
Q Consensus 416 --GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~-~GI~Iks~~g~~G~V~NItf~NI~i~~v-~~~I~I~~~y~~~~~~~~ 491 (584)
+..+. + ...+|+|.++.|.+.. +.-+++. + ..+.+.|+.+.+. .+++.+.
T Consensus 211 ~~~~~L~--G------~sd~vT~hhN~f~~~~~R~Pr~r~-----g--~~~hv~NN~~~n~~~~~i~~~----------- 264 (359)
T 1idk_A 211 YWAIYLD--G------DADLVTMKGNYIYHTSGRSPKVQD-----N--TLLHAVNNYWYDISGHAFEIG----------- 264 (359)
T ss_dssp SCCEEEC--C------SSCEEEEESCEEESBCSCTTEECT-----T--CEEEEESCEEEEEEEEEEEEC-----------
T ss_pred cceEEEE--e------cCCCeEEEceEeecCcccCccccC-----C--ceEEEECCEEecccceEEecc-----------
Confidence 22221 1 1137889998888643 1112211 0 1355666666543 2333331
Q ss_pred CCCCeeEEeEEEEeEE
Q 040748 492 KTSAVYVSDILYSNIK 507 (584)
Q Consensus 492 ~~~~~~I~nItf~NI~ 507 (584)
......+++=.|++..
T Consensus 265 ~~~~i~~e~N~F~~~~ 280 (359)
T 1idk_A 265 EGGYVLAEGNVFQNVD 280 (359)
T ss_dssp TTCEEEEESCEEEEEE
T ss_pred CCcEEEEEccEEECCC
Confidence 1245677777777765
No 44
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=98.28 E-value=3.6e-05 Score=79.90 Aligned_cols=133 Identities=12% Similarity=0.140 Sum_probs=84.7
Q ss_pred eecCceEeeeeEecCCC------ceeeeeccccEEEEeEEEECCCCCCCCCceeecCcccEEEEceEEecCCCcEEeCCC
Q 040748 327 MSSNLTVQRLRIKDSPQ------FHFRFDNCKNVHIESIHITAPALSPNTDGIHIENTNGVEIYNSVISNGDDCVSIGSG 400 (584)
Q Consensus 327 ~s~nvtI~gvti~ns~~------~~I~i~~s~nV~I~nv~I~~~~~~~ntDGI~i~~S~nV~I~n~~i~~gDDgIai~sg 400 (584)
.+++++++||+|+|... -.|.+ .++++.+.+|+|.. +.|++.....+ ..+++|+|...-|-|. +.
T Consensus 92 ~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-----~QDTLy~~~~r-~~~~~c~I~G~vDFIf-G~- 162 (319)
T 1gq8_A 92 VGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILA-----YQDSLYVHSNR-QFFINCFIAGTVDFIF-GN- 162 (319)
T ss_dssp CSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEEC-----STTCEEECSSE-EEEESCEEEESSSCEE-ES-
T ss_pred ECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECc-----cceeeeecCcc-EEEEecEEEeeeeEEe-cC-
Confidence 58999999999999642 23555 57888999999988 56778877665 4889999987777553 33
Q ss_pred ceeEEEEecccCCC-----CcceeeccCCCCCCCcEEeEEEEeeEEecCCc--------eEEEEeecCCCCeEEeEEEEc
Q 040748 401 CYDVDIRNITCGPG-----HGISIGSLGNHNSRACVSNITVRDSVIKVSNN--------GVRIKTWQGGSGAVSGITFSN 467 (584)
Q Consensus 401 s~NV~I~Nc~~~~g-----~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~~--------GI~Iks~~g~~G~V~NItf~N 467 (584)
....++||++..- ..-.|-..+. ........+.|.||+|..... ...+.=-+. ....+.|.+
T Consensus 163 -~~a~f~~c~i~~~~~~~~~~~~itA~~r-~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~---~~sr~v~~~ 237 (319)
T 1gq8_A 163 -AAVVLQDCDIHARRPGSGQKNMVTAQGR-TDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWK---EYSRTVVMQ 237 (319)
T ss_dssp -CEEEEESCEEEECCCSTTCCEEEEEECC-CSTTCCCEEEEESCEEEECTTTGGGGGGSCEEEECCSS---TTCEEEEES
T ss_pred -CcEEEEeeEEEEecCCCCCceEEEeCCC-CCCCCCceEEEECCEEecCCCccccccceeEEecccCC---CcceEEEEe
Confidence 4578899988641 1111111110 123345678899999876431 123321111 234678888
Q ss_pred eEEcCC
Q 040748 468 IHMNNV 473 (584)
Q Consensus 468 I~i~~v 473 (584)
..|...
T Consensus 238 t~~~~~ 243 (319)
T 1gq8_A 238 SSITNV 243 (319)
T ss_dssp CEECTT
T ss_pred ccCCCc
Confidence 888764
No 45
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=98.27 E-value=1.6e-05 Score=83.65 Aligned_cols=134 Identities=22% Similarity=0.250 Sum_probs=91.3
Q ss_pred ecCceEeee----eEecCCCceeeeeccccEEEEeEEEECCCC-----------CCCCCceeecCcccEEEEceEEecC-
Q 040748 328 SSNLTVQRL----RIKDSPQFHFRFDNCKNVHIESIHITAPAL-----------SPNTDGIHIENTNGVEIYNSVISNG- 391 (584)
Q Consensus 328 s~nvtI~gv----ti~ns~~~~I~i~~s~nV~I~nv~I~~~~~-----------~~ntDGI~i~~S~nV~I~n~~i~~g- 391 (584)
.+|.+|.|. +|. ..+|.+..++||.|+|++|+...+ ..+.|+|.+.++++|.|++|.|..+
T Consensus 79 ~sn~TI~G~G~~~~i~---g~gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~ 155 (355)
T 1pcl_A 79 PSNTTIIGVGSNGKFT---NGSLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGS 155 (355)
T ss_pred CCCeEEEEecCCeEEe---cCEEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccc
Confidence 466777653 333 246778889999999999986421 1357999999999999999999864
Q ss_pred -----------------CCcEEeCCCceeEEEEecccCCC-CcceeeccCCCC-CCCcEEeEEEEeeEEecCC-ceEEEE
Q 040748 392 -----------------DDCVSIGSGCYDVDIRNITCGPG-HGISIGSLGNHN-SRACVSNITVRDSVIKVSN-NGVRIK 451 (584)
Q Consensus 392 -----------------DDgIai~sgs~NV~I~Nc~~~~g-~GI~IGS~g~~~-~~~~v~nI~I~Nit~~~s~-~GI~Ik 451 (584)
|..+.++.++.+|+|+||+|..- .++-+|+..... ......+|+|.+|.|.+.. +.-+++
T Consensus 156 ~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~PrvR 235 (355)
T 1pcl_A 156 FTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVTERAPRVR 235 (355)
T ss_pred cCccccccccCccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEEeCCcccCCcee
Confidence 44566777789999999999864 345566542211 1112357999999998753 333442
Q ss_pred eecCCCCeEEeEEEEceEEcC
Q 040748 452 TWQGGSGAVSGITFSNIHMNN 472 (584)
Q Consensus 452 s~~g~~G~V~NItf~NI~i~~ 472 (584)
. | .+.+-|+.+.+
T Consensus 236 ~-----G---~~Hv~NN~~~~ 248 (355)
T 1pcl_A 236 F-----G---SIHAYNNVYLG 248 (355)
T ss_pred c-----c---eEEEEcceEEc
Confidence 1 1 15566666644
No 46
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.25 E-value=2.4e-05 Score=81.77 Aligned_cols=132 Identities=14% Similarity=0.140 Sum_probs=92.8
Q ss_pred eEEEEeecCceEeeeeEecC-----------CCceeeeeccccEEEEeEEEECCCCCCCCCc-eeec-CcccEEEEceEE
Q 040748 322 ALRFFMSSNLTVQRLRIKDS-----------PQFHFRFDNCKNVHIESIHITAPALSPNTDG-IHIE-NTNGVEIYNSVI 388 (584)
Q Consensus 322 ~I~f~~s~nvtI~gvti~ns-----------~~~~I~i~~s~nV~I~nv~I~~~~~~~ntDG-I~i~-~S~nV~I~n~~i 388 (584)
.|.+.+++||.|++|+|++. ...+|.+..++||-|++|++... .|| |++. .+++|+|.+|.|
T Consensus 84 Gi~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~-----~Dg~idi~~~s~~vTISnn~f 158 (340)
T 3zsc_A 84 GLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWIDHITFVNG-----NDGAVDIKKYSNYITVSWNKF 158 (340)
T ss_dssp EEEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEEESCEEESC-----SSCSEEEETTCEEEEEESCEE
T ss_pred ceEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEecCCcEEEEeeeeccC-----CccceEEecCCceEEEECcEe
Confidence 57777889999999999875 23468899999999999999873 455 6665 688999999999
Q ss_pred ecCCCcEEeCCC----------ceeEEEEecccCCCC--cceeeccCCCCCCCcEEeEEEEeeEEec----------C-C
Q 040748 389 SNGDDCVSIGSG----------CYDVDIRNITCGPGH--GISIGSLGNHNSRACVSNITVRDSVIKV----------S-N 445 (584)
Q Consensus 389 ~~gDDgIai~sg----------s~NV~I~Nc~~~~g~--GI~IGS~g~~~~~~~v~nI~I~Nit~~~----------s-~ 445 (584)
...+-+.-++.. ..+|++.+|.|.+.. .=.+. .+ .+.+-|+.+.+ . .
T Consensus 159 ~~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~r-------~G---~~Hv~NN~~~n~~~~~~~~~~~~~ 228 (340)
T 3zsc_A 159 VDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNLIQRMPRIR-------FG---MAHVFNNFYSMGLRTGVSGNVFPI 228 (340)
T ss_dssp ESCSBCCEECCCTTSCHHHHHHSCEEEEESCEEESCCBCTTEEE-------SS---EEEEESCEEECCCCCSCSSCCSCC
T ss_pred ccCceeeEeCcCCCCccccccCCcEEEEECeEecCCCCCCCccc-------CC---eEEEEccEEECCccccccccceee
Confidence 876655555442 137999999887542 22221 11 46888888887 2 1
Q ss_pred ceEEEEeecCCCCeEEeEEEEceEEcCCcc
Q 040748 446 NGVRIKTWQGGSGAVSGITFSNIHMNNVRN 475 (584)
Q Consensus 446 ~GI~Iks~~g~~G~V~NItf~NI~i~~v~~ 475 (584)
+++.... + ..|.+|++.|++++.
T Consensus 229 yai~~~~--~-----a~i~~E~N~F~~~~~ 251 (340)
T 3zsc_A 229 YGVASAM--G-----AKVHVEGNYFMGYGA 251 (340)
T ss_dssp EEEEEET--T-----CEEEEESCEEECSCH
T ss_pred eeEecCC--C-----CEEEEECcEEECCCc
Confidence 2443322 2 368889999988876
No 47
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=98.24 E-value=3.8e-05 Score=79.65 Aligned_cols=133 Identities=11% Similarity=0.095 Sum_probs=82.7
Q ss_pred eecCceEeeeeEecCCC------ceeeeeccccEEEEeEEEECCCCCCCCCceeecCcccEEEEceEEecCCCcEEeCCC
Q 040748 327 MSSNLTVQRLRIKDSPQ------FHFRFDNCKNVHIESIHITAPALSPNTDGIHIENTNGVEIYNSVISNGDDCVSIGSG 400 (584)
Q Consensus 327 ~s~nvtI~gvti~ns~~------~~I~i~~s~nV~I~nv~I~~~~~~~ntDGI~i~~S~nV~I~n~~i~~gDDgIai~sg 400 (584)
.+++++++||+|+|... -.|.+ .++++.+.+|+|.. +.|++.....+. .+++|+|...-|-|. +.
T Consensus 88 ~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-----~QDTLy~~~~r~-~~~~c~I~G~vDFIf-G~- 158 (317)
T 1xg2_A 88 VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDA-----YQDTLYAHSQRQ-FYRDSYVTGTVDFIF-GN- 158 (317)
T ss_dssp CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEEC-----STTCEEECSSEE-EEESCEEEESSSCEE-EC-
T ss_pred ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCc-----cccceeecCccE-EEEeeEEEeceeEEc-CC-
Confidence 68999999999999742 23554 57788889998887 467777776554 888888887666543 33
Q ss_pred ceeEEEEecccCCC-----CcceeeccCCCCCCCcEEeEEEEeeEEecCCc--------eEEEEeecCCCCeEEeEEEEc
Q 040748 401 CYDVDIRNITCGPG-----HGISIGSLGNHNSRACVSNITVRDSVIKVSNN--------GVRIKTWQGGSGAVSGITFSN 467 (584)
Q Consensus 401 s~NV~I~Nc~~~~g-----~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~~--------GI~Iks~~g~~G~V~NItf~N 467 (584)
....++||++..- ..-.|-..+. ........+.|.||+|..... ...+.=-+. ....+.|.|
T Consensus 159 -~~avf~~c~i~~~~~~~~~~~~itA~~r-~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~---~~sr~v~~~ 233 (317)
T 1xg2_A 159 -AAVVFQKCQLVARKPGKYQQNMVTAQGR-TDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWK---EYSRTVVME 233 (317)
T ss_dssp -CEEEEESCEEEECCCSTTCCEEEEEECC-CCTTSCCEEEEESCEEEECTTTGGGTTTSCEEEECCSS---TTCEEEEES
T ss_pred -ceEEEeeeEEEEeccCCCCccEEEecCc-CCCCCCcEEEEECCEEecCCCccccccceeEEeecccC---CCceEEEEe
Confidence 4578888887641 1111111110 123345678888888875431 123321111 234678888
Q ss_pred eEEcCC
Q 040748 468 IHMNNV 473 (584)
Q Consensus 468 I~i~~v 473 (584)
..|...
T Consensus 234 t~~~~~ 239 (317)
T 1xg2_A 234 SYLGGL 239 (317)
T ss_dssp CEECTT
T ss_pred cccCCc
Confidence 888754
No 48
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.22 E-value=2.1e-05 Score=82.09 Aligned_cols=164 Identities=16% Similarity=0.150 Sum_probs=107.7
Q ss_pred EEEEeecCceEeeeeEecCCCceeeee-ccccEEEEeEEEECCCCCCCCCceeec-----CcccEEEEceEEecC-----
Q 040748 323 LRFFMSSNLTVQRLRIKDSPQFHFRFD-NCKNVHIESIHITAPALSPNTDGIHIE-----NTNGVEIYNSVISNG----- 391 (584)
Q Consensus 323 I~f~~s~nvtI~gvti~ns~~~~I~i~-~s~nV~I~nv~I~~~~~~~ntDGI~i~-----~S~nV~I~n~~i~~g----- 391 (584)
+.+.-..|++|.+-+.. -...+|.+. .++||.|+|++|+........|+|.+. .+++|.|++|.+..+
T Consensus 66 ~~l~v~sn~TI~G~~a~-i~g~gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~ 144 (330)
T 2qy1_A 66 VQIKNKSDVTIKGANGS-AANFGIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCS 144 (330)
T ss_dssp EEEESCCSEEEEECTTC-BBSSEEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCT
T ss_pred eEEEcCCCeEEECCCcE-EeeeeEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccc
Confidence 44444677777653210 124578888 899999999999975432368999999 599999999999632
Q ss_pred -------CCcEEeCCCceeEEEEecccCCC-CcceeeccCCCCCCCcEEeEEEEeeEEecCC-ceEEEEeecCCCCeEEe
Q 040748 392 -------DDCVSIGSGCYDVDIRNITCGPG-HGISIGSLGNHNSRACVSNITVRDSVIKVSN-NGVRIKTWQGGSGAVSG 462 (584)
Q Consensus 392 -------DDgIai~sgs~NV~I~Nc~~~~g-~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~-~GI~Iks~~g~~G~V~N 462 (584)
|..|.++.++.+|+|+||+|.+- .++-+|+.-... .....+|+|.+|.|.+.. +.-+++. | .
T Consensus 145 ~~~~~~~Dg~idi~~~s~~VTISnn~f~~h~k~~L~G~sd~~~-~~~~~~vT~h~N~f~~~~~R~Pr~r~-----G---~ 215 (330)
T 2qy1_A 145 GAGDASFDGGIDMKKGVHHVTVSYNYVYNYQKVALNGYSDSDT-KNSAARTTYHHNRFENVESRVPLQRF-----G---L 215 (330)
T ss_dssp TCTTCSSCCSEEEESSCEEEEEESCEEEEEEECCEESSSTTCG-GGGGCEEEEESCEEEEEEECTTEEES-----S---E
T ss_pred cCCcceeecccccccCcceEEEEcceeccCCeEEEECCCCccc-cCCCceEEEECcEEcCCCCCCCceec-----c---e
Confidence 55677777899999999999754 345555532111 111258999999998643 1223321 2 2
Q ss_pred EEEEceEEcCC-cccEEEEEeecCCCCCCCCCCCeeEEeEEEEeEE
Q 040748 463 ITFSNIHMNNV-RNPIIIDQYYCLTKDCTNKTSAVYVSDILYSNIK 507 (584)
Q Consensus 463 Itf~NI~i~~v-~~~I~I~~~y~~~~~~~~~~~~~~I~nItf~NI~ 507 (584)
+.+-|+.+.+. .+++... ....+.+++=.|++.+
T Consensus 216 ~hv~NN~~~n~~~~~i~~~-----------~~~~i~~e~N~F~~~~ 250 (330)
T 2qy1_A 216 SHIYNNYFNNVTTSGINVR-----------MGGIAKIESNYFENIK 250 (330)
T ss_dssp EEEESCEEEEECSCSEEEE-----------TTCEEEEESCEEEEEE
T ss_pred EEEEeeEEEcccceEeccC-----------CCcEEEEEccEEECCC
Confidence 55666666554 3455432 1245677888888765
No 49
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.19 E-value=2.1e-05 Score=82.52 Aligned_cols=131 Identities=14% Similarity=0.125 Sum_probs=97.2
Q ss_pred eEEEEeecCceEeeeeEecCC----------------------CceeeeeccccEEEEeEEEECCCCCCCCCce-ee-cC
Q 040748 322 ALRFFMSSNLTVQRLRIKDSP----------------------QFHFRFDNCKNVHIESIHITAPALSPNTDGI-HI-EN 377 (584)
Q Consensus 322 ~I~f~~s~nvtI~gvti~ns~----------------------~~~I~i~~s~nV~I~nv~I~~~~~~~ntDGI-~i-~~ 377 (584)
.|.+..++||.|++|+|++.. ..+|.+..+++|.|++|+|.. ..||+ ++ ..
T Consensus 107 gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~nVwIDHcs~s~-----~~Dg~id~~~~ 181 (346)
T 1pxz_A 107 CLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVTNAWIDHNSLSD-----CSDGLIDVTLG 181 (346)
T ss_dssp CEEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCEEEEEESCEEEC-----CSSEEEEEESS
T ss_pred eEEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCceEEEEeeEEec-----CCCCcEeeccC
Confidence 366678999999999998642 336899999999999999997 46787 66 58
Q ss_pred cccEEEEceEEecCCCcEEeCCC-------ceeEEEEeccc-CCC--CcceeeccCCCCCCCcEEeEEEEeeEEecCC-c
Q 040748 378 TNGVEIYNSVISNGDDCVSIGSG-------CYDVDIRNITC-GPG--HGISIGSLGNHNSRACVSNITVRDSVIKVSN-N 446 (584)
Q Consensus 378 S~nV~I~n~~i~~gDDgIai~sg-------s~NV~I~Nc~~-~~g--~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~-~ 446 (584)
+++|+|++|.|...+.++-++.. ..+|++.+|.| .+. ..-.+.. ..++|.|+.+.+.. +
T Consensus 182 s~~vTISnn~f~~H~k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~~~R~Pr~r~----------g~~hv~NN~~~~~~~~ 251 (346)
T 1pxz_A 182 STGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARY----------GLVHVANNNYDPWNIY 251 (346)
T ss_dssp CEEEEEESCEEESEEEEEEESCCSSCGGGGGCEEEEESCEECSSEEECTTEEES----------SEEEEESCEECCCSSC
T ss_pred cceEEEEeeEEecCCceeEECCCCccccCCceEEEEEeeEEeCCccccCccEec----------ceEEEEeeEEEcccce
Confidence 99999999999987767767542 24899999999 543 2222311 26889999998743 4
Q ss_pred eEEEEeecCCCCeEEeEEEEceEEcCCc
Q 040748 447 GVRIKTWQGGSGAVSGITFSNIHMNNVR 474 (584)
Q Consensus 447 GI~Iks~~g~~G~V~NItf~NI~i~~v~ 474 (584)
++.... -..+.+|++.|+...
T Consensus 252 ~i~~~~-------~~~i~~egN~F~~~~ 272 (346)
T 1pxz_A 252 AIGGSS-------NPTILSEGNSFTAPS 272 (346)
T ss_dssp SEEEES-------CCEEEEESCEEECCS
T ss_pred EEeccC-------CceEEEECCEEECCC
Confidence 554432 246889999998754
No 50
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.18 E-value=1.8e-05 Score=83.19 Aligned_cols=161 Identities=12% Similarity=0.101 Sum_probs=106.9
Q ss_pred EEEEe-ecCceEeeeeEecCCCceeeeeccccEEEEeEEEECCCC-CCCCCceeecCcccEEEEceEEecC---------
Q 040748 323 LRFFM-SSNLTVQRLRIKDSPQFHFRFDNCKNVHIESIHITAPAL-SPNTDGIHIENTNGVEIYNSVISNG--------- 391 (584)
Q Consensus 323 I~f~~-s~nvtI~gvti~ns~~~~I~i~~s~nV~I~nv~I~~~~~-~~ntDGI~i~~S~nV~I~n~~i~~g--------- 391 (584)
+.+.. ..+++|.+.+-. ....+|.+..++||.|+|++|+..+. ..+.|+|.+.++++|.|++|.|..+
T Consensus 82 ~~i~~~~sn~TI~G~~~~-~~g~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~ 160 (353)
T 1air_A 82 VEIKEFTKGITIIGANGS-SANFGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPD 160 (353)
T ss_dssp EEEESBCSCEEEEECTTC-CBSSEEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGG
T ss_pred eEEEecCCCEEEEeccCC-CCCceEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccc
Confidence 45543 468888886421 23567888899999999999996432 2467999999999999999999743
Q ss_pred -----CCcEEeCCCceeEEEEecccCCCC-cceeeccCCCCCCCcEEeEEEEeeEEecCC-ceEEEEeecCCCCeEEeEE
Q 040748 392 -----DDCVSIGSGCYDVDIRNITCGPGH-GISIGSLGNHNSRACVSNITVRDSVIKVSN-NGVRIKTWQGGSGAVSGIT 464 (584)
Q Consensus 392 -----DDgIai~sgs~NV~I~Nc~~~~g~-GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~-~GI~Iks~~g~~G~V~NIt 464 (584)
|..+.++.++.+|+|+||.|...+ +.-+|+... ... .+|+|.+|.|.+.. +.-+++. | .+.
T Consensus 161 ~~~~~DGl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~---~~g-~~vT~hhN~f~~~~~R~Pr~r~-----G---~~H 228 (353)
T 1air_A 161 NDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSS---DTG-RNITYHHNYYNDVNARLPLQRG-----G---LVH 228 (353)
T ss_dssp GCCSSCCSEEEESSCCEEEEESCEEEEEEECCEESSSTT---CCC-CEEEEESCEEEEEEECSCEEES-----S---EEE
T ss_pred cccccccceeeecccCcEEEEeeEEcCCCceeEECCCcC---CCC-ceEEEEceEEcCCcCCCCCCcC-----c---eEE
Confidence 446677777899999999998643 344555321 112 68999999997642 2334421 2 244
Q ss_pred EEceEEcCCc-ccEEEEEeecCCCCCCCCCCCeeEEeEEEEeEE
Q 040748 465 FSNIHMNNVR-NPIIIDQYYCLTKDCTNKTSAVYVSDILYSNIK 507 (584)
Q Consensus 465 f~NI~i~~v~-~~I~I~~~y~~~~~~~~~~~~~~I~nItf~NI~ 507 (584)
+-|+.+.+.. +++... ......+++=.|++..
T Consensus 229 v~NN~~~n~~~~~~~~~-----------~~~~i~~e~N~F~~~~ 261 (353)
T 1air_A 229 AYNNLYTNITGSGLNVR-----------QNGQALIENNWFEKAI 261 (353)
T ss_dssp EESCEEEEESSCSEEEE-----------TTCEEEEESCEEEEEE
T ss_pred EEccEEECCCCceeccC-----------CCcEEEEEceEEECCC
Confidence 5566555432 344332 1234667777777764
No 51
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=98.15 E-value=1.5e-05 Score=85.54 Aligned_cols=137 Identities=20% Similarity=0.237 Sum_probs=93.7
Q ss_pred EEeecCceEeee----eEecCCCceeeeeccccEEEEeEEEECCCC---------------CCCCCceeecCcccEEEEc
Q 040748 325 FFMSSNLTVQRL----RIKDSPQFHFRFDNCKNVHIESIHITAPAL---------------SPNTDGIHIENTNGVEIYN 385 (584)
Q Consensus 325 f~~s~nvtI~gv----ti~ns~~~~I~i~~s~nV~I~nv~I~~~~~---------------~~ntDGI~i~~S~nV~I~n 385 (584)
+.-..|.+|.|+ .|. ..+|.+..++||.|+|++|+...+ ..+.|+|.+.++++|.|++
T Consensus 128 i~v~snkTI~G~G~~~~i~---g~gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDH 204 (416)
T 1vbl_A 128 VYVGSNTSIIGVGKDAKIK---GGGFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDH 204 (416)
T ss_dssp EECCSSEEEEECTTCCEEE---SCEEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEES
T ss_pred EEeCCCeeEEecCCCeEEe---cCEEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEc
Confidence 333567777654 343 356888899999999999987532 1357999999999999999
Q ss_pred eEEecC------------------CCcEEeCCCceeEEEEecccCCC-CcceeeccCCCCCCCcEEeEEEEeeEEecCC-
Q 040748 386 SVISNG------------------DDCVSIGSGCYDVDIRNITCGPG-HGISIGSLGNHNSRACVSNITVRDSVIKVSN- 445 (584)
Q Consensus 386 ~~i~~g------------------DDgIai~sgs~NV~I~Nc~~~~g-~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~- 445 (584)
|.|..+ |..|.++.++.+|+|+||+|.+- .++-||+...+........|+|.+|.|.+..
T Consensus 205 cs~s~~~~~d~~~~~~~Gr~~~~~DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~~~ 284 (416)
T 1vbl_A 205 NTFTDGDHPDRSLGTYFGRPFQQHDGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNVTQ 284 (416)
T ss_dssp CEEECTTCCGGGSCEETTEECCCCCCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEEEE
T ss_pred cEEecCCCcccccccccCcceeecccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCCcc
Confidence 999864 56677877889999999999864 3466665422111112347999999997643
Q ss_pred ceEEEEeecCCCCeEEeEEEEceEEcC
Q 040748 446 NGVRIKTWQGGSGAVSGITFSNIHMNN 472 (584)
Q Consensus 446 ~GI~Iks~~g~~G~V~NItf~NI~i~~ 472 (584)
+.-+++ .| .+++-|+.+.+
T Consensus 285 R~Pr~R-----~G---~~Hv~NN~~~n 303 (416)
T 1vbl_A 285 RLPRVR-----FG---QVHIYNNYYEF 303 (416)
T ss_dssp CSSEES-----SC---EEEEESCEEEE
T ss_pred CCcccc-----cc---eEEEEcceEEC
Confidence 233442 12 25666666653
No 52
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.13 E-value=3.4e-05 Score=80.47 Aligned_cols=140 Identities=11% Similarity=0.151 Sum_probs=97.6
Q ss_pred eEEEE-eecCceEeeeeEecCC----Cceeeee-----ccccEEEEeEEEECCCCC------CCCCc-eeec-CcccEEE
Q 040748 322 ALRFF-MSSNLTVQRLRIKDSP----QFHFRFD-----NCKNVHIESIHITAPALS------PNTDG-IHIE-NTNGVEI 383 (584)
Q Consensus 322 ~I~f~-~s~nvtI~gvti~ns~----~~~I~i~-----~s~nV~I~nv~I~~~~~~------~ntDG-I~i~-~S~nV~I 383 (584)
.|.+. +++||.|++|+|++.. ..+|.+. .++||-|++|++....+. ..-|| |++. .+.+|+|
T Consensus 87 gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTI 166 (330)
T 2qy1_A 87 GIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTV 166 (330)
T ss_dssp EEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEE
T ss_pred eEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEE
Confidence 46777 8999999999999864 4578888 599999999999753210 11144 4654 6899999
Q ss_pred EceEEecCCCcEEeCCC-------ceeEEEEecccCCC--CcceeeccCCCCCCCcEEeEEEEeeEEecC-CceEEEEee
Q 040748 384 YNSVISNGDDCVSIGSG-------CYDVDIRNITCGPG--HGISIGSLGNHNSRACVSNITVRDSVIKVS-NNGVRIKTW 453 (584)
Q Consensus 384 ~n~~i~~gDDgIai~sg-------s~NV~I~Nc~~~~g--~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s-~~GI~Iks~ 453 (584)
.+|.|...+-+.-++.. ..+|++.+|.|.+. ..=.+. .+ .+.|.|+.+.+. .+++....
T Consensus 167 Snn~f~~h~k~~L~G~sd~~~~~~~~~vT~h~N~f~~~~~R~Pr~r-------~G---~~hv~NN~~~n~~~~~i~~~~- 235 (330)
T 2qy1_A 167 SYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFENVESRVPLQR-------FG---LSHIYNNYFNNVTTSGINVRM- 235 (330)
T ss_dssp ESCEEEEEEECCEESSSTTCGGGGGCEEEEESCEEEEEEECTTEEE-------SS---EEEEESCEEEEECSCSEEEET-
T ss_pred EcceeccCCeEEEECCCCccccCCCceEEEECcEEcCCCCCCCcee-------cc---eEEEEeeEEEcccceEeccCC-
Confidence 99999875555555442 15999999999653 222221 11 478889998875 35665432
Q ss_pred cCCCCeEEeEEEEceEEcCCcccEE
Q 040748 454 QGGSGAVSGITFSNIHMNNVRNPII 478 (584)
Q Consensus 454 ~g~~G~V~NItf~NI~i~~v~~~I~ 478 (584)
+ ..|.+|++.|++.+.++.
T Consensus 236 -~-----~~i~~e~N~F~~~~~p~~ 254 (330)
T 2qy1_A 236 -G-----GIAKIESNYFENIKNPVT 254 (330)
T ss_dssp -T-----CEEEEESCEEEEEESSEE
T ss_pred -C-----cEEEEEccEEECCCCcee
Confidence 1 358889999988776654
No 53
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=98.11 E-value=0.00012 Score=76.96 Aligned_cols=137 Identities=18% Similarity=0.164 Sum_probs=91.1
Q ss_pred eEEEEeecCceEeeeeEecCC---------------CceeeeeccccEEEEeEEEECCCCC------------CCCCc-e
Q 040748 322 ALRFFMSSNLTVQRLRIKDSP---------------QFHFRFDNCKNVHIESIHITAPALS------------PNTDG-I 373 (584)
Q Consensus 322 ~I~f~~s~nvtI~gvti~ns~---------------~~~I~i~~s~nV~I~nv~I~~~~~~------------~ntDG-I 373 (584)
.|.+.+++||.|++|+|++.. ..+|.+..+++|-|++|++....+. .-.|| |
T Consensus 97 gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~ 176 (355)
T 1pcl_A 97 SLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGAL 176 (355)
T ss_pred EEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccce
Confidence 366778999999999998641 3468999999999999999864210 01465 3
Q ss_pred eec-CcccEEEEceEEecCCCcEEeCCC---------ceeEEEEecccCCCC--cceeeccCCCCCCCcEEeEEEEeeEE
Q 040748 374 HIE-NTNGVEIYNSVISNGDDCVSIGSG---------CYDVDIRNITCGPGH--GISIGSLGNHNSRACVSNITVRDSVI 441 (584)
Q Consensus 374 ~i~-~S~nV~I~n~~i~~gDDgIai~sg---------s~NV~I~Nc~~~~g~--GI~IGS~g~~~~~~~v~nI~I~Nit~ 441 (584)
++. .+++|+|.+|.|...+-+.-++.. ..+|++.+|.|.+.. .=.+ +.+ .+++.|+.+
T Consensus 177 Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~Prv-------R~G---~~Hv~NN~~ 246 (355)
T 1pcl_A 177 DIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVTERAPRV-------RFG---SIHAYNNVY 246 (355)
T ss_pred eeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEEeCCcccCCce-------ecc---eEEEEcceE
Confidence 455 789999999999876666555542 137999999997542 2222 011 378889988
Q ss_pred ecCC-ce-----EEEEeecCCCCeEEeEEEEceEEcCC
Q 040748 442 KVSN-NG-----VRIKTWQGGSGAVSGITFSNIHMNNV 473 (584)
Q Consensus 442 ~~s~-~G-----I~Iks~~g~~G~V~NItf~NI~i~~v 473 (584)
.+.. .+ -.|.. +.-..|.+|++.|+..
T Consensus 247 ~~~~~~~~~~~~ya~g~-----~~~~~i~~e~N~F~~~ 279 (355)
T 1pcl_A 247 LGDVKHSVYPYLYSFGL-----GTSGSILSESNSFTLS 279 (355)
T ss_pred EcccCCCccccceEecC-----CCCcEEEEEccEEECC
Confidence 7542 12 12211 1123578888888764
No 54
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.10 E-value=1.8e-05 Score=83.50 Aligned_cols=133 Identities=16% Similarity=0.153 Sum_probs=77.6
Q ss_pred ccccEEEEeEEEECCCC--CCCCCceeecCcccEEEEceEEec-CCCcEE-eCCCceeEEEEecccCCC----------C
Q 040748 350 NCKNVHIESIHITAPAL--SPNTDGIHIENTNGVEIYNSVISN-GDDCVS-IGSGCYDVDIRNITCGPG----------H 415 (584)
Q Consensus 350 ~s~nV~I~nv~I~~~~~--~~ntDGI~i~~S~nV~I~n~~i~~-gDDgIa-i~sgs~NV~I~Nc~~~~g----------~ 415 (584)
.++||.|+|++|+.... ....|+|.+..+++|.|++|.+.. +|..+. ...++.+|+|+||+|... |
T Consensus 131 ~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~~~~~s~~~~G~H 210 (359)
T 1qcx_A 131 GAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHH 210 (359)
T ss_dssp TCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCSSBTTSSSBB
T ss_pred CCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeeccCcCceeecccccccEEEECcEecCCccccccCcccc
Confidence 44555555555554211 135689999999999999999875 454553 344689999999999642 2
Q ss_pred --cceeeccCCCCCCCcEEeEEEEeeEEecCCc-eEEEEeecCCCCeEEeEEEEceEEcCC-cccEEEEEeecCCCCCCC
Q 040748 416 --GISIGSLGNHNSRACVSNITVRDSVIKVSNN-GVRIKTWQGGSGAVSGITFSNIHMNNV-RNPIIIDQYYCLTKDCTN 491 (584)
Q Consensus 416 --GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~~-GI~Iks~~g~~G~V~NItf~NI~i~~v-~~~I~I~~~y~~~~~~~~ 491 (584)
+..+. +...+|++.++.|.+... .-+++. -..+.+.|+.+.+. .+++...
T Consensus 211 ~~~~~l~--------G~sd~vT~~~N~f~~~~~R~Pr~r~-------~~~~hv~NN~~~n~~~~a~~~~----------- 264 (359)
T 1qcx_A 211 YWGVYLD--------GSNDMVTLKGNYFYNLSGRMPKVQG-------NTLLHAVNNLFHNFDGHAFEIG----------- 264 (359)
T ss_dssp SCCEEEC--------CSSEEEEEESCEEESBCSCTTEECS-------SEEEEEESCEEEEEEEEEEEEC-----------
T ss_pred cceeEEe--------cCCCCeehcccEeccCcccCceecC-------CceEEEEccEEECccCeEEecC-----------
Confidence 22221 112478888888876432 222221 01355666666543 2333321
Q ss_pred CCCCeeEEeEEEEeEEE
Q 040748 492 KTSAVYVSDILYSNIKG 508 (584)
Q Consensus 492 ~~~~~~I~nItf~NI~g 508 (584)
......+++=.|++..-
T Consensus 265 ~~~~i~~e~N~F~~~~~ 281 (359)
T 1qcx_A 265 TGGYVLAEGNVFQDVNV 281 (359)
T ss_dssp TTEEEEEESCEEEEEEE
T ss_pred CCceEEEEeeEEECCCc
Confidence 22456777888887763
No 55
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=98.05 E-value=2.5e-05 Score=83.40 Aligned_cols=136 Identities=17% Similarity=0.170 Sum_probs=93.0
Q ss_pred EeecCceEeee----eEecCCCceeeeeccccEEEEeEEEECCCC---------------CCCCCceeecCcccEEEEce
Q 040748 326 FMSSNLTVQRL----RIKDSPQFHFRFDNCKNVHIESIHITAPAL---------------SPNTDGIHIENTNGVEIYNS 386 (584)
Q Consensus 326 ~~s~nvtI~gv----ti~ns~~~~I~i~~s~nV~I~nv~I~~~~~---------------~~ntDGI~i~~S~nV~I~n~ 386 (584)
.-..|.+|.|. .|. ..+|.+.. +||.|+|++|+...+ ....|+|.+.++++|.|++|
T Consensus 124 ~v~snkTI~G~G~~~~i~---g~gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHc 199 (399)
T 2o04_A 124 DIPANTTIVGSGTNAKVV---GGNFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHC 199 (399)
T ss_dssp ECCSSEEEEESSSCCEEE---SCEEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESC
T ss_pred EeCCCceEEeccCCeEEe---eCEEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEee
Confidence 33566777654 444 35677888 999999999987532 13579999999999999999
Q ss_pred EEecC------------------CCcEEeCCCceeEEEEecccCCC-CcceeeccCCCCCCCcEEeEEEEeeEEecCC-c
Q 040748 387 VISNG------------------DDCVSIGSGCYDVDIRNITCGPG-HGISIGSLGNHNSRACVSNITVRDSVIKVSN-N 446 (584)
Q Consensus 387 ~i~~g------------------DDgIai~sgs~NV~I~Nc~~~~g-~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~-~ 446 (584)
.|..+ |..|.++.++.+|+|+||+|.+- .++-||+...........+|+|.+|.|.+.. +
T Consensus 200 s~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~~~R 279 (399)
T 2o04_A 200 TFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQA 279 (399)
T ss_dssp EEECTTCCGGGSCEETTEECCCCCCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEEEEC
T ss_pred eeecCCCccccccccccceeeccccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCCccc
Confidence 99854 66678887899999999999853 3466665422111112348999999997643 2
Q ss_pred eEEEEeecCCCCeEEeEEEEceEEcCC
Q 040748 447 GVRIKTWQGGSGAVSGITFSNIHMNNV 473 (584)
Q Consensus 447 GI~Iks~~g~~G~V~NItf~NI~i~~v 473 (584)
.-+++ .| .+.+-|+.+.+.
T Consensus 280 ~Pr~R-----~G---~~Hv~NN~~~n~ 298 (399)
T 2o04_A 280 APRVR-----FG---QVHVYNNYYEGS 298 (399)
T ss_dssp TTEES-----SC---EEEEESCEEECC
T ss_pred CCCcc-----cc---eEEEEcceEECC
Confidence 33332 12 266777777543
No 56
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=97.98 E-value=9e-05 Score=78.08 Aligned_cols=136 Identities=13% Similarity=0.096 Sum_probs=86.6
Q ss_pred eEEEE-eecCceEeeeeEecC------CCceeeeeccccEEEEeEEEECCCCCCCCCcee---ecCcccEEEEceEEecC
Q 040748 322 ALRFF-MSSNLTVQRLRIKDS------PQFHFRFDNCKNVHIESIHITAPALSPNTDGIH---IENTNGVEIYNSVISNG 391 (584)
Q Consensus 322 ~I~f~-~s~nvtI~gvti~ns------~~~~I~i~~s~nV~I~nv~I~~~~~~~ntDGI~---i~~S~nV~I~n~~i~~g 391 (584)
.|.+. +++||.|++|+|++. ...+|.+..+++|-|++|++... .|++. ...+++|+|.+|.|...
T Consensus 125 gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~-----~d~~~~~g~~~s~~VTISnn~f~~~ 199 (359)
T 1idk_A 125 GLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARI-----GRQHYVLGTSADNRVSLTNNYIDGV 199 (359)
T ss_dssp CEEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEE-----SSCSEEECCCTTCEEEEESCEEECB
T ss_pred eEEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecC-----CCCcEEecccCcceEEEECcEecCC
Confidence 36676 788899999888873 22468888889999999988853 23333 34678899999988742
Q ss_pred C---------C--cEEeCCCceeEEEEecccCCCC--cceeeccCCCCCCCcEEeEEEEeeEEecC-CceEEEEeecCCC
Q 040748 392 D---------D--CVSIGSGCYDVDIRNITCGPGH--GISIGSLGNHNSRACVSNITVRDSVIKVS-NNGVRIKTWQGGS 457 (584)
Q Consensus 392 D---------D--gIai~sgs~NV~I~Nc~~~~g~--GI~IGS~g~~~~~~~v~nI~I~Nit~~~s-~~GI~Iks~~g~~ 457 (584)
+ + ...+...+.+|++.+|.|.+.. .=.+. .-+.+.|.|+.+.+. .+++.+..
T Consensus 200 ~~~s~~~~G~h~~~~~L~G~sd~vT~hhN~f~~~~~R~Pr~r---------~g~~~hv~NN~~~n~~~~~i~~~~----- 265 (359)
T 1idk_A 200 SDYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTSGRSPKVQ---------DNTLLHAVNNYWYDISGHAFEIGE----- 265 (359)
T ss_dssp CSCBTTSSSBBSCCEEECCSSCEEEEESCEEESBCSCTTEEC---------TTCEEEEESCEEEEEEEEEEEECT-----
T ss_pred cccccccCccccceEEEEecCCCeEEEceEeecCcccCcccc---------CCceEEEECCEEecccceEEeccC-----
Confidence 2 1 2334333568888888887532 11110 112577888888763 23444321
Q ss_pred CeEEeEEEEceEEcCCcccEE
Q 040748 458 GAVSGITFSNIHMNNVRNPII 478 (584)
Q Consensus 458 G~V~NItf~NI~i~~v~~~I~ 478 (584)
-..|.+|++.|++.+.++.
T Consensus 266 --~~~i~~e~N~F~~~~~p~~ 284 (359)
T 1idk_A 266 --GGYVLAEGNVFQNVDTVLE 284 (359)
T ss_dssp --TCEEEEESCEEEEEEEEEE
T ss_pred --CcEEEEEccEEECCCCcee
Confidence 1357888888877665543
No 57
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=97.98 E-value=0.00013 Score=75.98 Aligned_cols=133 Identities=14% Similarity=0.175 Sum_probs=82.4
Q ss_pred ccEEEEeEEEECCCCCCCCCceeecC-cccEEEEceEEec----------CCCcEEeCCCceeEEEEecccCCC-Cccee
Q 040748 352 KNVHIESIHITAPALSPNTDGIHIEN-TNGVEIYNSVISN----------GDDCVSIGSGCYDVDIRNITCGPG-HGISI 419 (584)
Q Consensus 352 ~nV~I~nv~I~~~~~~~ntDGI~i~~-S~nV~I~n~~i~~----------gDDgIai~sgs~NV~I~Nc~~~~g-~GI~I 419 (584)
+||.|+|++|+... ....|+|.+.. +++|.|++|.+.. .|..+.++.++.+|+|+||.|.+- .++-+
T Consensus 103 ~NVIIrNl~i~~~~-~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h~k~~Li 181 (326)
T 3vmv_A 103 HNIIIQNVSIHHVR-EGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHWKTMLV 181 (326)
T ss_dssp EEEEEESCEEECCC-STTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEEEECEEE
T ss_pred ceEEEECeEEEcCC-CCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecCceEEEE
Confidence 34444444444322 23678999986 8999999999962 355778888889999999999753 34556
Q ss_pred eccCCCCCCCcEEeEEEEeeEEecCC-ceEEEEeecCCCCeEEeEEEEceEEcCC-cccEEEEEeecCCCCCCCCCCCee
Q 040748 420 GSLGNHNSRACVSNITVRDSVIKVSN-NGVRIKTWQGGSGAVSGITFSNIHMNNV-RNPIIIDQYYCLTKDCTNKTSAVY 497 (584)
Q Consensus 420 GS~g~~~~~~~v~nI~I~Nit~~~s~-~GI~Iks~~g~~G~V~NItf~NI~i~~v-~~~I~I~~~y~~~~~~~~~~~~~~ 497 (584)
|+.-... ..-.+|+|.++.|.+.. +.-+++. | .+.+-|+.+.+. .+++.... .....
T Consensus 182 G~sd~~~--~~~~~vT~~~N~f~~~~~R~Pr~r~-----G---~~Hv~NN~~~n~~~~~~~~~~-----------~a~v~ 240 (326)
T 3vmv_A 182 GHTDNAS--LAPDKITYHHNYFNNLNSRVPLIRY-----A---DVHMFNNYFKDINDTAINSRV-----------GARVF 240 (326)
T ss_dssp CSSSCGG--GCCEEEEEESCEEEEEEECTTEEES-----C---EEEEESCEEEEESSCSEEEET-----------TCEEE
T ss_pred CCCCCCc--ccCccEEEEeeEecCCcCcCCcccC-----C---cEEEEccEEECCCceEEeecC-----------CcEEE
Confidence 5532110 01247899999887642 1223331 1 356666666654 35554431 24678
Q ss_pred EEeEEEEeE
Q 040748 498 VSDILYSNI 506 (584)
Q Consensus 498 I~nItf~NI 506 (584)
+++=.|++.
T Consensus 241 ~e~N~F~~~ 249 (326)
T 3vmv_A 241 VENNYFDNV 249 (326)
T ss_dssp EESCEEEEE
T ss_pred EEceEEECC
Confidence 888888888
No 58
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=97.97 E-value=0.00047 Score=69.86 Aligned_cols=169 Identities=18% Similarity=0.255 Sum_probs=115.2
Q ss_pred CceEEEecccccCCCCcchHHHHHHHHHHHhhcCCcEEEEcCCeEEEeeeeeeecccCCceEEeee--eeecCCCCCCcc
Q 040748 187 GNVIDVRKFGAVGDGISDDTEAFKMTWDSACQKDFAVIHVPYGFSFMIQSTIFTGPCQGSIVFQVD--GTIMPPDGPESW 264 (584)
Q Consensus 187 ~~~~~v~~~GA~gdg~tDdT~Aiq~Ai~~a~~~~g~~v~~p~G~tY~i~~~~ltgp~ksnvtL~l~--GtL~~s~~~~~~ 264 (584)
++++.+++|||.+|-.+||+.+|.+-+.. -..|++|.| .|....+.+ +...|+.. |+|+.-+....|
T Consensus 62 arvls~k~fga~~~~~~d~~~~~~~sl~s-----~~~v~i~~g-vf~ss~i~~-----~~c~l~g~g~g~~~~~~~~gn~ 130 (542)
T 2x3h_A 62 ARVLTSKPFGAAGDATTDDTEVIAASLNS-----QKAVTISDG-VFSSSGINS-----NYCNLDGRGSGVLSHRSSTGNY 130 (542)
T ss_dssp HHBCBSSCTTCCCBSSSCCHHHHHHHHTS-----SSCEECCSE-EEEECCEEE-----SCCEEECTTTEEEEECSSSSCC
T ss_pred heeeecccccccCCcccCcHHHHHhhhcc-----cccEecccc-ccccccccc-----ccccccccCCceeeeecCCCCE
Confidence 46788899999999999999999987753 468999999 787766654 55667765 577654332222
Q ss_pred cccCCcceeEEE-----eeeeceEEecCeEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCeeEEEEeecCceEeeeeEe
Q 040748 265 LQKNSKRQWLVF-----YKINELSLQGGGTIDGRGHKWWDLPCKPHKGINGTTSPGPCDSPIALRFFMSSNLTVQRLRIK 339 (584)
Q Consensus 265 ~~~~~~~~lI~~-----~~~~NVtI~G~G~IDGnG~~ww~~~~~~~~g~~g~~~~g~~~rP~~I~f~~s~nvtI~gvti~ 339 (584)
+.| ....+++|.|. ... + ....+.+.|....+++++++.+.
T Consensus 131 ---------lvfn~p~~g~ls~~ti~~n------k~~--d-----------------s~qg~qvs~~gg~dvsv~~i~fs 176 (542)
T 2x3h_A 131 ---------LVFNNPRTGRLSNITVESN------KAT--D-----------------TTQGQQVSLAGGSDVTVSDVNFS 176 (542)
T ss_dssp ---------EEEESCEEEEEEEEEEECC------CSS--T-----------------TCBCCSEEEESCEEEEEEEEEEE
T ss_pred ---------EEEeCCCCcceeeEEEecc------cCC--c-----------------cccceEEEecCCCcceEeeeeee
Confidence 222 23567777772 100 0 01233588899999999999999
Q ss_pred cCCCceeeeec------cccEEEEeEEEECCCCCCC-CCcee-ecCcccEEEEceEEec--CCCcEEeCCC
Q 040748 340 DSPQFHFRFDN------CKNVHIESIHITAPALSPN-TDGIH-IENTNGVEIYNSVISN--GDDCVSIGSG 400 (584)
Q Consensus 340 ns~~~~I~i~~------s~nV~I~nv~I~~~~~~~n-tDGI~-i~~S~nV~I~n~~i~~--gDDgIai~sg 400 (584)
|....++.+.. -+...|++++=.-..+..| .-|.. ++++.|-.|++...++ .-..+.+|..
T Consensus 177 n~~g~gfsliayp~~~~p~g~~i~~irg~y~g~a~nk~agcvl~dss~nslid~via~nypqfgavelk~~ 247 (542)
T 2x3h_A 177 NVKGTGFSLIAYPNDAPPDGLMIKGIRGSYSGYATNKAAGCVLADSSVNSLIDNVIAKNYPQFGAVELKGT 247 (542)
T ss_dssp EECSBEEEEEEECSSSCCBSCEEEEEEEEECSCCTTCSEEEEEEESCBSCEEEEEEEESCCTTEEEEEETT
T ss_pred ecCCCceeEEEcCCCCCCCceEEeccccceeccccccccceEEeccchhhhhhhhhhhcCCccceEEeecc
Confidence 98777765542 2457788887765544433 33444 5688999999988887 3456667664
No 59
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=97.96 E-value=7.2e-05 Score=77.77 Aligned_cols=135 Identities=15% Similarity=0.167 Sum_probs=95.7
Q ss_pred eEEEEeecCceEeeeeEecCC---Cceeeeec-cccEEEEeEEEECCC----CCCCCCce-eec-CcccEEEEceEEecC
Q 040748 322 ALRFFMSSNLTVQRLRIKDSP---QFHFRFDN-CKNVHIESIHITAPA----LSPNTDGI-HIE-NTNGVEIYNSVISNG 391 (584)
Q Consensus 322 ~I~f~~s~nvtI~gvti~ns~---~~~I~i~~-s~nV~I~nv~I~~~~----~~~ntDGI-~i~-~S~nV~I~n~~i~~g 391 (584)
.|.+.+++||.|++|+|++.. ..+|.+.. +++|-|++|++.... +....||+ ++. ++.+|+|.+|.|...
T Consensus 96 gl~i~~a~NVIIrNl~i~~~~~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h 175 (326)
T 3vmv_A 96 GIRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENH 175 (326)
T ss_dssp CEEEESEEEEEEESCEEECCCSTTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEE
T ss_pred EEEEEecceEEEECeEEEcCCCCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecC
Confidence 477889999999999999864 45699997 999999999998532 11123554 554 689999999999876
Q ss_pred CCcEEeCCC------ceeEEEEecccCCC--CcceeeccCCCCCCCcEEeEEEEeeEEecC-CceEEEEeecCCCCeEEe
Q 040748 392 DDCVSIGSG------CYDVDIRNITCGPG--HGISIGSLGNHNSRACVSNITVRDSVIKVS-NNGVRIKTWQGGSGAVSG 462 (584)
Q Consensus 392 DDgIai~sg------s~NV~I~Nc~~~~g--~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s-~~GI~Iks~~g~~G~V~N 462 (584)
+-+.-++.. ..+|++.+|.|.+. ..=.+. . -.+.|.|+.+.+. .+++.... + ..
T Consensus 176 ~k~~LiG~sd~~~~~~~~vT~~~N~f~~~~~R~Pr~r-------~---G~~Hv~NN~~~n~~~~~~~~~~--~-----a~ 238 (326)
T 3vmv_A 176 WKTMLVGHTDNASLAPDKITYHHNYFNNLNSRVPLIR-------Y---ADVHMFNNYFKDINDTAINSRV--G-----AR 238 (326)
T ss_dssp EECEEECSSSCGGGCCEEEEEESCEEEEEEECTTEEE-------S---CEEEEESCEEEEESSCSEEEET--T-----CE
T ss_pred ceEEEECCCCCCcccCccEEEEeeEecCCcCcCCccc-------C---CcEEEEccEEECCCceEEeecC--C-----cE
Confidence 555556542 24899999999753 222221 1 1578889999875 35665432 2 46
Q ss_pred EEEEceEEcCC
Q 040748 463 ITFSNIHMNNV 473 (584)
Q Consensus 463 Itf~NI~i~~v 473 (584)
|.+|++.|++.
T Consensus 239 v~~e~N~F~~~ 249 (326)
T 3vmv_A 239 VFVENNYFDNV 249 (326)
T ss_dssp EEEESCEEEEE
T ss_pred EEEEceEEECC
Confidence 78888888765
No 60
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=97.95 E-value=0.00015 Score=77.05 Aligned_cols=131 Identities=8% Similarity=0.175 Sum_probs=101.7
Q ss_pred cCceEeeeeEecC-----C------Cceeeeec-cccEEEEeEEEECCCCCCCCCceeecCcccEEEEceEEecCCCcEE
Q 040748 329 SNLTVQRLRIKDS-----P------QFHFRFDN-CKNVHIESIHITAPALSPNTDGIHIENTNGVEIYNSVISNGDDCVS 396 (584)
Q Consensus 329 ~nvtI~gvti~ns-----~------~~~I~i~~-s~nV~I~nv~I~~~~~~~ntDGI~i~~S~nV~I~n~~i~~gDDgIa 396 (584)
++|+|++++|.+. . ..+|.+.. ++++.|++++|.. +.-||.+..+++++|++++|.....||.
T Consensus 136 s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~-----~~fGI~l~~a~~~~I~~N~I~e~GNgI~ 210 (410)
T 2inu_A 136 SGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVY-----LEHALIVRGADALRVNDNMIAECGNCVE 210 (410)
T ss_dssp ECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEES-----CSEEEEETTEESCEEESCEEESSSEEEE
T ss_pred CCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEec-----ccEEEEEccCCCcEEECCEEEecCCcee
Confidence 5666666666554 3 23688875 8889999999998 4459999999999999999997778899
Q ss_pred eCCCceeEEEEecccCCC-Cc--ceeeccCCCCCCCcEEeEEEEeeEE-ecCCceEEEEeecCCCCeEEeEEEEceEEcC
Q 040748 397 IGSGCYDVDIRNITCGPG-HG--ISIGSLGNHNSRACVSNITVRDSVI-KVSNNGVRIKTWQGGSGAVSGITFSNIHMNN 472 (584)
Q Consensus 397 i~sgs~NV~I~Nc~~~~g-~G--I~IGS~g~~~~~~~v~nI~I~Nit~-~~s~~GI~Iks~~g~~G~V~NItf~NI~i~~ 472 (584)
+...++...|+|+.+..+ +| |.+. ...+.+|+++.+ .+..+|+.+.. ..+..|+++++..
T Consensus 211 L~G~~~~~~I~~N~i~~~~dG~gIyl~---------ns~~~~I~~N~i~~~~R~gIh~m~-------s~~~~i~~N~f~~ 274 (410)
T 2inu_A 211 LTGAGQATIVSGNHMGAGPDGVTLLAE---------NHEGLLVTGNNLFPRGRSLIEFTG-------CNRCSVTSNRLQG 274 (410)
T ss_dssp ECSCEESCEEESCEEECCTTSEEEEEE---------SEESCEEESCEECSCSSEEEEEES-------CBSCEEESCEEEE
T ss_pred eccccccceEecceeeecCCCCEEEEE---------eCCCCEEECCCcccCcceEEEEEc-------cCCCEEECCEEec
Confidence 987678889999998865 45 6662 367889999977 55788999876 3456788888877
Q ss_pred CcccEEEE
Q 040748 473 VRNPIIID 480 (584)
Q Consensus 473 v~~~I~I~ 480 (584)
...++.+.
T Consensus 275 ~~~Gi~~M 282 (410)
T 2inu_A 275 FYPGMLRL 282 (410)
T ss_dssp SSSCSEEE
T ss_pred ceeEEEEE
Confidence 77776664
No 61
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=97.92 E-value=0.00019 Score=75.61 Aligned_cols=135 Identities=14% Similarity=0.074 Sum_probs=94.3
Q ss_pred EEEE-eecCceEeeeeEecCC------CceeeeeccccEEEEeEEEECCCCCCCCCcee---ecCcccEEEEceEEecCC
Q 040748 323 LRFF-MSSNLTVQRLRIKDSP------QFHFRFDNCKNVHIESIHITAPALSPNTDGIH---IENTNGVEIYNSVISNGD 392 (584)
Q Consensus 323 I~f~-~s~nvtI~gvti~ns~------~~~I~i~~s~nV~I~nv~I~~~~~~~ntDGI~---i~~S~nV~I~n~~i~~gD 392 (584)
|.+. .++||.|++|+|++.. ..+|.+..+++|.|++|++... .|+.. ...+++|+|.+|.|....
T Consensus 126 l~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~-----~d~~~~~~~~~s~~vTISnn~f~~~~ 200 (359)
T 1qcx_A 126 LRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARI-----GRQHIVLGTSADNRVTISYSLIDGRS 200 (359)
T ss_dssp EEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEE-----SSCSEEECSSCCEEEEEESCEEECBC
T ss_pred EEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeecc-----CcCceeecccccccEEEECcEecCCc
Confidence 6666 8999999999999753 2468999999999999999863 34432 347899999999997421
Q ss_pred -----------CcEEeCCCceeEEEEecccCCCCc--ceeeccCCCCCCCcEEeEEEEeeEEecC-CceEEEEeecCCCC
Q 040748 393 -----------DCVSIGSGCYDVDIRNITCGPGHG--ISIGSLGNHNSRACVSNITVRDSVIKVS-NNGVRIKTWQGGSG 458 (584)
Q Consensus 393 -----------DgIai~sgs~NV~I~Nc~~~~g~G--I~IGS~g~~~~~~~v~nI~I~Nit~~~s-~~GI~Iks~~g~~G 458 (584)
.+..+...+.+|++.++.|.+..+ =.+. .-..+.|.|+.+.+. .+++....
T Consensus 201 ~~s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~~~~R~Pr~r---------~~~~~hv~NN~~~n~~~~a~~~~~------ 265 (359)
T 1qcx_A 201 DYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKVQ---------GNTLLHAVNNLFHNFDGHAFEIGT------ 265 (359)
T ss_dssp SSBTTSSSBBSCCEEECCSSEEEEEESCEEESBCSCTTEEC---------SSEEEEEESCEEEEEEEEEEEECT------
T ss_pred cccccCcccccceeEEecCCCCeehcccEeccCcccCceec---------CCceEEEEccEEECccCeEEecCC------
Confidence 233343336799999999875321 1221 113688999998874 23444321
Q ss_pred eEEeEEEEceEEcCCcccEE
Q 040748 459 AVSGITFSNIHMNNVRNPII 478 (584)
Q Consensus 459 ~V~NItf~NI~i~~v~~~I~ 478 (584)
-..|.+|++.|++..+++.
T Consensus 266 -~~~i~~e~N~F~~~~~~~~ 284 (359)
T 1qcx_A 266 -GGYVLAEGNVFQDVNVVVE 284 (359)
T ss_dssp -TEEEEEESCEEEEEEEEEC
T ss_pred -CceEEEEeeEEECCCcccC
Confidence 2578999999988776653
No 62
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=97.90 E-value=6.2e-05 Score=79.32 Aligned_cols=133 Identities=24% Similarity=0.273 Sum_probs=89.6
Q ss_pred ecCceEeee----eEecCCCceeee---eccccEEEEeEEEECCCCC-----------CCCCceeecC-cccEEEEceEE
Q 040748 328 SSNLTVQRL----RIKDSPQFHFRF---DNCKNVHIESIHITAPALS-----------PNTDGIHIEN-TNGVEIYNSVI 388 (584)
Q Consensus 328 s~nvtI~gv----ti~ns~~~~I~i---~~s~nV~I~nv~I~~~~~~-----------~ntDGI~i~~-S~nV~I~n~~i 388 (584)
..|.+|.|. .|+ ..+|.+ ..++||.|+|++|+...+. ...|+|.+.+ +++|.|++|.|
T Consensus 86 ~snkTI~G~G~~~~i~---g~gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~ 162 (361)
T 1pe9_A 86 PANTTVIGLGTDAKFI---NGSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTI 162 (361)
T ss_dssp CSSEEEEECTTCCEEE---SSEEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEE
T ss_pred cCCcEEEccCCCeEEe---cCEEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEe
Confidence 456666653 343 256788 6899999999999964310 3579999998 99999999999
Q ss_pred ecC------------------CCcEEeCCCceeEEEEecccCCC-CcceeeccCCCC-CCCcEEeEEEEeeEEecCC-ce
Q 040748 389 SNG------------------DDCVSIGSGCYDVDIRNITCGPG-HGISIGSLGNHN-SRACVSNITVRDSVIKVSN-NG 447 (584)
Q Consensus 389 ~~g------------------DDgIai~sgs~NV~I~Nc~~~~g-~GI~IGS~g~~~-~~~~v~nI~I~Nit~~~s~-~G 447 (584)
..+ |..|.++.++.+|+|++|+|..- -++-||+.-... ....-..|+|.+|.|.+.. +.
T Consensus 163 s~~~~~~~~~~~~~G~~~~~~DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~ 242 (361)
T 1pe9_A 163 SDGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTERA 242 (361)
T ss_dssp ECTTSCGGGCCEETTEECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEEEECS
T ss_pred ecccccccccccccCcceeeccceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeEEcCccccC
Confidence 853 66788888899999999999753 345555431100 0012247999999997642 22
Q ss_pred EEEEeecCCCCeEEeEEEEceEEc
Q 040748 448 VRIKTWQGGSGAVSGITFSNIHMN 471 (584)
Q Consensus 448 I~Iks~~g~~G~V~NItf~NI~i~ 471 (584)
-+++ .| .+++-|+.+.
T Consensus 243 Pr~R-----~G---~~Hv~NN~~~ 258 (361)
T 1pe9_A 243 PRVR-----YG---SIHSFNNVFK 258 (361)
T ss_dssp SEES-----SC---EEEEESCEEE
T ss_pred cccc-----cc---eEEEEcceEe
Confidence 2331 12 2566666664
No 63
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=97.66 E-value=0.00019 Score=76.68 Aligned_cols=108 Identities=8% Similarity=0.007 Sum_probs=81.6
Q ss_pred EEEEeecCceEeeeeEecCCCceeeeeccccEEEEeEEEECCCCCCCCCceeecCc-ccEEEEceEEecC---------C
Q 040748 323 LRFFMSSNLTVQRLRIKDSPQFHFRFDNCKNVHIESIHITAPALSPNTDGIHIENT-NGVEIYNSVISNG---------D 392 (584)
Q Consensus 323 I~f~~s~nvtI~gvti~ns~~~~I~i~~s~nV~I~nv~I~~~~~~~ntDGI~i~~S-~nV~I~n~~i~~g---------D 392 (584)
|.+ ...+++|++|+|.+....+|.+.. .+.+|++|+|... ...||.+... .+.+|++|++... .
T Consensus 110 i~i-~~~~~~i~gl~I~n~g~~GI~v~g-s~~~i~n~~i~~n----~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~ 183 (400)
T 1ru4_A 110 FYV-TGDYWYFKGVEVTRAGYQGAYVIG-SHNTFENTAFHHN----RNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMA 183 (400)
T ss_dssp EEE-CSSCEEEESEEEESCSSCSEEECS-SSCEEESCEEESC----SSCSEEECTTCCSCEEESCEEECCCCTTTTTSSC
T ss_pred EEE-ECCeEEEEeEEEEeCCCCcEEEeC-CCcEEEeEEEECC----CceeEEEEcccCCeEEEceEEEcccCccccCccc
Confidence 444 788999999999998777898887 6789999999983 2349999864 4889999999753 2
Q ss_pred CcEEeCCC-ceeEEEEecccCCC--CcceeeccCCCCCCCcEEeEEEEeeEEecC
Q 040748 393 DCVSIGSG-CYDVDIRNITCGPG--HGISIGSLGNHNSRACVSNITVRDSVIKVS 444 (584)
Q Consensus 393 DgIai~sg-s~NV~I~Nc~~~~g--~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s 444 (584)
|+|.++.. .+..+|++|+++.. +||.+-. ....|+|+||...+.
T Consensus 184 dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~~--------~~~~v~i~nn~a~~N 230 (400)
T 1ru4_A 184 DGFGPKQKQGPGNRFVGCRAWENSDDGFDLFD--------SPQKVVIENSWAFRN 230 (400)
T ss_dssp CSEEECTTCCSCCEEESCEEESCSSCSEECTT--------CCSCCEEESCEEEST
T ss_pred ceEEEEecccCCeEEECCEEeecCCCcEEEEe--------cCCCEEEEeEEEECC
Confidence 68888642 35678999998753 6776621 224579999998754
No 64
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=97.64 E-value=0.001 Score=69.70 Aligned_cols=106 Identities=10% Similarity=0.106 Sum_probs=69.2
Q ss_pred EeecCceEeeeeEecCCC------------------c--eee-eeccccEEEEeEEEECCCCCCCCCceeecCcccEEEE
Q 040748 326 FMSSNLTVQRLRIKDSPQ------------------F--HFR-FDNCKNVHIESIHITAPALSPNTDGIHIENTNGVEIY 384 (584)
Q Consensus 326 ~~s~nvtI~gvti~ns~~------------------~--~I~-i~~s~nV~I~nv~I~~~~~~~ntDGI~i~~S~nV~I~ 384 (584)
..+++++++||+|+|... . .+. -..++++.+.+|+|.. ..|.+..... ...++
T Consensus 93 v~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G-----~QDTLy~~~g-r~~~~ 166 (342)
T 2nsp_A 93 ISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVG-----YQATLYVSGG-RSFFS 166 (342)
T ss_dssp ECSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEEC-----STTCEEECSS-EEEEE
T ss_pred EECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEec-----ccceEEECCC-CEEEE
Confidence 358899999999998751 1 242 1457888999999998 5667777654 57889
Q ss_pred ceEEecCCCcEEeCCCceeEEEEecccCCC---C-------c-ceeeccCCCCCCCcEEeEEEEeeEEecC
Q 040748 385 NSVISNGDDCVSIGSGCYDVDIRNITCGPG---H-------G-ISIGSLGNHNSRACVSNITVRDSVIKVS 444 (584)
Q Consensus 385 n~~i~~gDDgIai~sgs~NV~I~Nc~~~~g---~-------G-I~IGS~g~~~~~~~v~nI~I~Nit~~~s 444 (584)
+|+|...-|-| ++. ....++||++..- . | |.--+. ....-..+.|.||+|...
T Consensus 167 ~c~I~G~vDFI-FG~--a~a~f~~c~i~~~~~~~~~~~~~~g~ItA~~~----~~~~~~G~vf~~c~i~~~ 230 (342)
T 2nsp_A 167 DCRISGTVDFI-FGD--GTALFNNCDLVSRYRADVKSGNVSGYLTAPST----NINQKYGLVITNSRVIRE 230 (342)
T ss_dssp SCEEEESEEEE-EES--SEEEEESCEEEECCCTTSCTTSCCEEEEEECC----BTTCSCCEEEESCEEEES
T ss_pred cCEEEeceEEE-eCC--ceEEEecCEEEEecCcccccccCceEEEccCC----CCCCCCEEEEEcCEEecC
Confidence 99998766633 333 3578889887531 0 2 211110 122334678899998764
No 65
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=97.63 E-value=0.00027 Score=74.33 Aligned_cols=140 Identities=16% Similarity=0.162 Sum_probs=96.9
Q ss_pred eEEEEeecCceEeeeeEecCC-----CceeeeeccccEEEEeEEEECCCCC--------CCCCce-eec-CcccEEEEce
Q 040748 322 ALRFFMSSNLTVQRLRIKDSP-----QFHFRFDNCKNVHIESIHITAPALS--------PNTDGI-HIE-NTNGVEIYNS 386 (584)
Q Consensus 322 ~I~f~~s~nvtI~gvti~ns~-----~~~I~i~~s~nV~I~nv~I~~~~~~--------~ntDGI-~i~-~S~nV~I~n~ 386 (584)
.|.+.+++||.|++|+|+..+ ...|.+..++||-|++|++....+. ...||. ++. .+++|+|.+|
T Consensus 104 gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn 183 (353)
T 1air_A 104 GIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYN 183 (353)
T ss_dssp EEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESC
T ss_pred eEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEee
Confidence 477789999999999999754 3469999999999999999864221 112554 553 7899999999
Q ss_pred EEecCCCcEEeCCC----ceeEEEEecccCCC--CcceeeccCCCCCCCcEEeEEEEeeEEecCC-ceEEEEeecCCCCe
Q 040748 387 VISNGDDCVSIGSG----CYDVDIRNITCGPG--HGISIGSLGNHNSRACVSNITVRDSVIKVSN-NGVRIKTWQGGSGA 459 (584)
Q Consensus 387 ~i~~gDDgIai~sg----s~NV~I~Nc~~~~g--~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~-~GI~Iks~~g~~G~ 459 (584)
.|...+-+.-++.. ..+|++.+|.|.+. ..-.+. . -.+.|.|+.+.+.. +++.... +
T Consensus 184 ~f~~h~k~~LiG~sd~~~g~~vT~hhN~f~~~~~R~Pr~r-------~---G~~Hv~NN~~~n~~~~~~~~~~--~---- 247 (353)
T 1air_A 184 YIHGVKKVGLDGSSSSDTGRNITYHHNYYNDVNARLPLQR-------G---GLVHAYNNLYTNITGSGLNVRQ--N---- 247 (353)
T ss_dssp EEEEEEECCEESSSTTCCCCEEEEESCEEEEEEECSCEEE-------S---SEEEEESCEEEEESSCSEEEET--T----
T ss_pred EEcCCCceeEECCCcCCCCceEEEEceEEcCCcCCCCCCc-------C---ceEEEEccEEECCCCceeccCC--C----
Confidence 99864433334331 15899999999653 222221 1 15778899888743 4654422 1
Q ss_pred EEeEEEEceEEcCCcccEE
Q 040748 460 VSGITFSNIHMNNVRNPII 478 (584)
Q Consensus 460 V~NItf~NI~i~~v~~~I~ 478 (584)
..|.+|++.|++...++.
T Consensus 248 -~~i~~e~N~F~~~~~p~~ 265 (353)
T 1air_A 248 -GQALIENNWFEKAINPVT 265 (353)
T ss_dssp -CEEEEESCEEEEEESSEE
T ss_pred -cEEEEEceEEECCCCceE
Confidence 257889999988777763
No 66
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=97.47 E-value=0.0005 Score=73.70 Aligned_cols=135 Identities=13% Similarity=0.128 Sum_probs=91.7
Q ss_pred eEEEEeecCceEeeeeEecC-------------------CCceeeeeccccEEEEeEEEECCCCC------------CCC
Q 040748 322 ALRFFMSSNLTVQRLRIKDS-------------------PQFHFRFDNCKNVHIESIHITAPALS------------PNT 370 (584)
Q Consensus 322 ~I~f~~s~nvtI~gvti~ns-------------------~~~~I~i~~s~nV~I~nv~I~~~~~~------------~nt 370 (584)
.|.+.+++||.|++|+|++. ...+|.+..+++|-|++|++...... .-.
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~ 228 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQH 228 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeec
Confidence 46777899999999999763 12468999999999999999964210 114
Q ss_pred Cce-eec-CcccEEEEceEEecCCCcEEeCCC--------ceeEEEEecccCCC--CcceeeccCCCCCCCcEEeEEEEe
Q 040748 371 DGI-HIE-NTNGVEIYNSVISNGDDCVSIGSG--------CYDVDIRNITCGPG--HGISIGSLGNHNSRACVSNITVRD 438 (584)
Q Consensus 371 DGI-~i~-~S~nV~I~n~~i~~gDDgIai~sg--------s~NV~I~Nc~~~~g--~GI~IGS~g~~~~~~~v~nI~I~N 438 (584)
||+ ++. .+++|+|.+|.|...+-+.-++.. .-+|++.+|.|.+. ..=.+ +.+ .++|.|
T Consensus 229 DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~~~R~Pr~-------R~G---~~Hv~N 298 (416)
T 1vbl_A 229 DGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNVTQRLPRV-------RFG---QVHIYN 298 (416)
T ss_dssp CCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEEEECSSEE-------SSC---EEEEES
T ss_pred ccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCCccCCccc-------ccc---eEEEEc
Confidence 553 455 789999999999876555555442 13699999999653 22222 111 378899
Q ss_pred eEEecCC-------ceEEEEeecCCCCeEEeEEEEceEEcCC
Q 040748 439 SVIKVSN-------NGVRIKTWQGGSGAVSGITFSNIHMNNV 473 (584)
Q Consensus 439 it~~~s~-------~GI~Iks~~g~~G~V~NItf~NI~i~~v 473 (584)
+.+.+.. +++.... + ..|.+|++.|+..
T Consensus 299 N~~~n~~~~~~~~~ya~g~~~--~-----~~i~~E~N~F~~~ 333 (416)
T 1vbl_A 299 NYYEFSNLADYDFQYAWGVGV--F-----SQIYAQNNYFSFD 333 (416)
T ss_dssp CEEEECTTSSSCCCCSEEEET--T-----CEEEEESCEEEES
T ss_pred ceEECCCCCcccceeEeccCC--C-----cEEEEECCEEECC
Confidence 9998532 3443321 1 2477888888753
No 67
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=97.42 E-value=0.00053 Score=72.25 Aligned_cols=135 Identities=18% Similarity=0.213 Sum_probs=88.7
Q ss_pred eEEE---EeecCceEeeeeEecCC---------------Cceeeeec-cccEEEEeEEEECCCCC------------CCC
Q 040748 322 ALRF---FMSSNLTVQRLRIKDSP---------------QFHFRFDN-CKNVHIESIHITAPALS------------PNT 370 (584)
Q Consensus 322 ~I~f---~~s~nvtI~gvti~ns~---------------~~~I~i~~-s~nV~I~nv~I~~~~~~------------~nt 370 (584)
.|.+ .+++||.|++|+|++.. ..+|.+.. ++||-|++|++....+. .-.
T Consensus 104 gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~ 183 (361)
T 1pe9_A 104 SLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQH 183 (361)
T ss_dssp EEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCC
T ss_pred EEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceeec
Confidence 3667 57899999999998631 34689999 99999999999864210 114
Q ss_pred Cc-eeec-CcccEEEEceEEecCCCcEEeCCC---------ceeEEEEecccCCC--CcceeeccCCCCCCCcEEeEEEE
Q 040748 371 DG-IHIE-NTNGVEIYNSVISNGDDCVSIGSG---------CYDVDIRNITCGPG--HGISIGSLGNHNSRACVSNITVR 437 (584)
Q Consensus 371 DG-I~i~-~S~nV~I~n~~i~~gDDgIai~sg---------s~NV~I~Nc~~~~g--~GI~IGS~g~~~~~~~v~nI~I~ 437 (584)
|| |++. .+++|+|.+|.|...+-+.-++.. ..+|++.+|.|.+. ..=.+ +.+ .+++.
T Consensus 184 DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~-------R~G---~~Hv~ 253 (361)
T 1pe9_A 184 DGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTERAPRV-------RYG---SIHSF 253 (361)
T ss_dssp CCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEEEECSSEE-------SSC---EEEEE
T ss_pred cceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeEEcCccccCccc-------ccc---eEEEE
Confidence 55 4565 789999999999865555555542 13799999999653 22111 111 37889
Q ss_pred eeEEecC--------CceEEEEeecCCCCeEEeEEEEceEEcCC
Q 040748 438 DSVIKVS--------NNGVRIKTWQGGSGAVSGITFSNIHMNNV 473 (584)
Q Consensus 438 Nit~~~s--------~~GI~Iks~~g~~G~V~NItf~NI~i~~v 473 (584)
|+.+.+. .+++.+. .+ ..|.+|++.|+..
T Consensus 254 NN~~~~~~~~~~~~~~ya~g~~--~~-----~~i~~E~N~F~~~ 290 (361)
T 1pe9_A 254 NNVFKGDAKDPVYRYQYSFGIG--TS-----GSVLSEGNSFTIA 290 (361)
T ss_dssp SCEEEEETTCSSSCCCCSEEEC--TT-----CEEEEESCEEEEE
T ss_pred cceEecccCCCccccceEecCC--CC-----cEEEEECCEEECC
Confidence 9998643 2333321 11 2467777777654
No 68
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=97.31 E-value=0.0022 Score=67.57 Aligned_cols=80 Identities=15% Similarity=0.186 Sum_probs=55.4
Q ss_pred EEeecCceEeeeeEecCCC--------------------ceeeee-ccccEEEEeEEEECCCCCCCCCceeecCcccEEE
Q 040748 325 FFMSSNLTVQRLRIKDSPQ--------------------FHFRFD-NCKNVHIESIHITAPALSPNTDGIHIENTNGVEI 383 (584)
Q Consensus 325 f~~s~nvtI~gvti~ns~~--------------------~~I~i~-~s~nV~I~nv~I~~~~~~~ntDGI~i~~S~nV~I 383 (584)
...+++++++||+|+|... -.+.+. ..+.+.+.+|+|.. +.|.+.........+
T Consensus 118 ~V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G-----~QDTLy~~~~gr~yf 192 (364)
T 3uw0_A 118 LVNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEG-----YQDTLYSKTGSRSYF 192 (364)
T ss_dssp EECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEEC-----SBSCEEECTTCEEEE
T ss_pred EEECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEe-----cccceEeCCCCCEEE
Confidence 3467899999999998742 134444 47788888888887 456776664456788
Q ss_pred EceEEecCCCcEEeCCCceeEEEEecccC
Q 040748 384 YNSVISNGDDCVSIGSGCYDVDIRNITCG 412 (584)
Q Consensus 384 ~n~~i~~gDDgIai~sgs~NV~I~Nc~~~ 412 (584)
++|+|...-|-| ++. ....++||++.
T Consensus 193 ~~c~I~GtvDFI-FG~--a~a~f~~c~i~ 218 (364)
T 3uw0_A 193 SDCEISGHVDFI-FGS--GITVFDNCNIV 218 (364)
T ss_dssp ESCEEEESEEEE-EES--SEEEEESCEEE
T ss_pred EcCEEEcCCCEE-CCc--ceEEEEeeEEE
Confidence 888888665533 332 45778888775
No 69
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=97.25 E-value=0.001 Score=70.97 Aligned_cols=134 Identities=11% Similarity=0.126 Sum_probs=90.5
Q ss_pred eEEEEeecCceEeeeeEecC-------------------CCceeeeeccccEEEEeEEEECCCCC------------CCC
Q 040748 322 ALRFFMSSNLTVQRLRIKDS-------------------PQFHFRFDNCKNVHIESIHITAPALS------------PNT 370 (584)
Q Consensus 322 ~I~f~~s~nvtI~gvti~ns-------------------~~~~I~i~~s~nV~I~nv~I~~~~~~------------~nt 370 (584)
.|.+.. +||.|++|+|++. ...+|.+..++||-|++|++....+. .-.
T Consensus 144 gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~ 222 (399)
T 2o04_A 144 NFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHH 222 (399)
T ss_dssp EEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeecc
Confidence 467777 9999999999763 12468999999999999999964210 114
Q ss_pred Cce-eec-CcccEEEEceEEecCCCcEEeCCC--------ceeEEEEecccCCC--CcceeeccCCCCCCCcEEeEEEEe
Q 040748 371 DGI-HIE-NTNGVEIYNSVISNGDDCVSIGSG--------CYDVDIRNITCGPG--HGISIGSLGNHNSRACVSNITVRD 438 (584)
Q Consensus 371 DGI-~i~-~S~nV~I~n~~i~~gDDgIai~sg--------s~NV~I~Nc~~~~g--~GI~IGS~g~~~~~~~v~nI~I~N 438 (584)
||. ++. .+++|+|.+|.|...+-+.-++.. ..+|++.+|.|.+. ..=.+. .+ .++|.|
T Consensus 223 Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~~~R~Pr~R-------~G---~~Hv~N 292 (399)
T 2o04_A 223 DGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQAAPRVR-------FG---QVHVYN 292 (399)
T ss_dssp CCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEEEECTTEES-------SC---EEEEES
T ss_pred ccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCCcccCCCcc-------cc---eEEEEc
Confidence 654 555 789999999999875555555442 13899999999653 222221 11 478999
Q ss_pred eEEecCC--------ceEEEEeecCCCCeEEeEEEEceEEcCC
Q 040748 439 SVIKVSN--------NGVRIKTWQGGSGAVSGITFSNIHMNNV 473 (584)
Q Consensus 439 it~~~s~--------~GI~Iks~~g~~G~V~NItf~NI~i~~v 473 (584)
+.+.+.. +++... . -..|.+|++.|+..
T Consensus 293 N~~~n~~~~~~~~~~ya~g~~--~-----~~~i~~e~N~F~~~ 328 (399)
T 2o04_A 293 NYYEGSTSSSSYPFSYAWGIG--K-----SSKIYAQNNVIDVP 328 (399)
T ss_dssp CEEECCTTCSSSCCCCSEEEC--T-----TCEEEEESCEEECT
T ss_pred ceEECCCCCCccceeeEeccC--C-----CcEEEEEceEEECC
Confidence 9997642 233321 1 13578888888764
No 70
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=96.77 E-value=0.0036 Score=66.85 Aligned_cols=79 Identities=18% Similarity=0.240 Sum_probs=55.1
Q ss_pred eEEEEeecCceEe-eeeEecCCCceeeeeccccEEEEeEEEECCCCCC-CCCceee------cCcccEEEEceEEecCCC
Q 040748 322 ALRFFMSSNLTVQ-RLRIKDSPQFHFRFDNCKNVHIESIHITAPALSP-NTDGIHI------ENTNGVEIYNSVISNGDD 393 (584)
Q Consensus 322 ~I~f~~s~nvtI~-gvti~ns~~~~I~i~~s~nV~I~nv~I~~~~~~~-ntDGI~i------~~S~nV~I~n~~i~~gDD 393 (584)
.+++..|++++++ +|.+. ++|+||.|.||.|...+++- -.-|.-. +.|++|+ +.
T Consensus 197 TIhPi~Cqnvt~r~gL~f~---------eSCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~se~~~---------hg 258 (514)
T 2vbk_A 197 HSKFIACQAGTCRVGLHFL---------GQCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWSSEAVR---------SE 258 (514)
T ss_dssp EEEEESCEEEEEEEEEEEE---------SCCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTTSSCBC---------CE
T ss_pred EEeEeccCceecccCcccc---------CCCCeEEEeccEEecCcceeeeecCceecccccCCcchhcc---------cc
Confidence 4788999999988 66664 48999999999999976531 1112211 3466665 55
Q ss_pred cEEeCCC-----cee-EEEEecccCCCCcce
Q 040748 394 CVSIGSG-----CYD-VDIRNITCGPGHGIS 418 (584)
Q Consensus 394 gIai~sg-----s~N-V~I~Nc~~~~g~GI~ 418 (584)
+|.+++. .+| |+|++|.|.+.+-+.
T Consensus 259 av~igSE~m~~Gvk~~v~v~~Clf~~td~~~ 289 (514)
T 2vbk_A 259 AIILDSETMCIGFKNAVYVHDCLDLHMEQLD 289 (514)
T ss_dssp EEEEESSEEEESCSEEEEESCCEEEEEESEE
T ss_pred cEEECchhhcccccccEEEEeeeccCCcccc
Confidence 6666663 578 999999988754433
No 71
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=96.42 E-value=0.052 Score=57.97 Aligned_cols=46 Identities=20% Similarity=0.196 Sum_probs=31.9
Q ss_pred hHHHHHHHHHHHhhc---CCcEEEEcCCeEEEeeeeeeecccCCceEEeeee
Q 040748 205 DTEAFKMTWDSACQK---DFAVIHVPYGFSFMIQSTIFTGPCQGSIVFQVDG 253 (584)
Q Consensus 205 dT~Aiq~Ai~~a~~~---~g~~v~~p~G~tY~i~~~~ltgp~ksnvtL~l~G 253 (584)
|-.-||+||+++... .-.+|+|.+| +|... +.+.. .|.+++|+++|
T Consensus 88 ~f~TIqeAVdaap~~~~~~r~vI~Ik~G-vY~E~-V~Ip~-~K~~ItL~G~G 136 (422)
T 3grh_A 88 THTTIQAAVDAAIIKRTNKRQYIAVMPG-EYQGT-VYVPA-APGGITLYGTG 136 (422)
T ss_dssp CBSSHHHHHHHHHTTCCSSCEEEEECSE-EEESC-EEECC-CSSCEEEEECS
T ss_pred CcCCHHHHHHhchhcCCCccEEEEEeCC-eEeee-EEecC-CCCcEEEEecc
Confidence 556799999976432 1469999999 89865 43321 16788888876
No 72
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=96.03 E-value=0.13 Score=48.96 Aligned_cols=129 Identities=18% Similarity=0.253 Sum_probs=77.0
Q ss_pred cEEEEeEEEECCCCCCCCCceeecCcccEEEEceEEe-cCCCcEEeCCCceeEEEEecccCCCCc--ceeeccCCCCCCC
Q 040748 353 NVHIESIHITAPALSPNTDGIHIENTNGVEIYNSVIS-NGDDCVSIGSGCYDVDIRNITCGPGHG--ISIGSLGNHNSRA 429 (584)
Q Consensus 353 nV~I~nv~I~~~~~~~ntDGI~i~~S~nV~I~n~~i~-~gDDgIai~sgs~NV~I~Nc~~~~g~G--I~IGS~g~~~~~~ 429 (584)
+.+++|+.|-. ...||||..+ +.+|+|++.. .+.|++.++. +..++|.+.-..++.. |..-.
T Consensus 53 GaTLkNvIIG~----~~~dGIHC~G--~ctl~NVwwedVcEDA~T~kg-~g~~~I~GGgA~~A~DKV~Q~Ng-------- 117 (196)
T 3t9g_A 53 GANLKNVIIGA----PGCDGIHCYG--DNVVENVVWEDVGEDALTVKS-EGVVEVIGGSAKEAADKVFQLNA-------- 117 (196)
T ss_dssp TCEEEEEEECS----CCTTCEEECS--SEEEEEEEESSCCSCSEEECS-SEEEEEESCEEEEEEEEEEEECS--------
T ss_pred CCEEEEEEECC----CCcCcEEEcC--CEeEEEEEeeeeeceeeEEcC-CCeEEEECCCccCCCceEEEECC--------
Confidence 56677777754 3578999875 6789999886 5899999985 5577777766554422 33311
Q ss_pred cEEeEEEEeeEEecCCceEEEEeecCCCCeEEeEEEEceEEcCCcccEEEEEeecCCCCCCCCCCCeeEEeEEEEeEEEe
Q 040748 430 CVSNITVRDSVIKVSNNGVRIKTWQGGSGAVSGITFSNIHMNNVRNPIIIDQYYCLTKDCTNKTSAVYVSDILYSNIKGT 509 (584)
Q Consensus 430 ~v~nI~I~Nit~~~s~~GI~Iks~~g~~G~V~NItf~NI~i~~v~~~I~I~~~y~~~~~~~~~~~~~~I~nItf~NI~gt 509 (584)
.-.+.|+|.++.+ .|--..++ |....-++|.++|+.+.+.+..|+ +.. .......+.|+.++|+.-.
T Consensus 118 -~Gtv~I~nF~~~~--~GKl~RSC-Gnc~~~r~v~i~~v~~~n~k~~l~-rtd--------S~~~~~~~~n~~~~~~~~~ 184 (196)
T 3t9g_A 118 -PCTFKVKNFTATN--IGKLVRQN-GNTTFKVVIYLEDVTLNNVKSCVA-KSD--------SPVSELWYHNLNVNNCKTL 184 (196)
T ss_dssp -SEEEEEEEEEEEE--EEEEEEEC-TTCCSCEEEEEEEEEEEEEEEEEE-ECC--------CTTCEEEEEEEEEEEEEEE
T ss_pred -CceEEEeeEEEcc--CCEEEEcC-CCCCceeEEEEeCeEEeCCEEEEE-EcC--------CCCCEEEEecceecCCCcc
Confidence 1246666666654 34444443 222344677777777776554432 211 1224456666666666533
No 73
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=95.23 E-value=0.23 Score=51.30 Aligned_cols=111 Identities=9% Similarity=0.043 Sum_probs=76.0
Q ss_pred ccccEEEEeEEEECCCCC--CCCCceeecCcccEEEEceEEecCCCcEEeCCCceeEEEEecccCCCCcceeeccCCCCC
Q 040748 350 NCKNVHIESIHITAPALS--PNTDGIHIENTNGVEIYNSVISNGDDCVSIGSGCYDVDIRNITCGPGHGISIGSLGNHNS 427 (584)
Q Consensus 350 ~s~nV~I~nv~I~~~~~~--~ntDGI~i~~S~nV~I~n~~i~~gDDgIai~sgs~NV~I~Nc~~~~g~GI~IGS~g~~~~ 427 (584)
.+++++++|++|.+.... ..+-+|.+ .+.++.++||.|....|.+.... .+ -.++||++.+...+=+|.
T Consensus 88 ~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~~~-~r-~~~~~c~I~G~vDFIfG~------ 158 (317)
T 1xg2_A 88 VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDAYQDTLYAHS-QR-QFYRDSYVTGTVDFIFGN------ 158 (317)
T ss_dssp CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEECSTTCEEECS-SE-EEEESCEEEESSSCEEEC------
T ss_pred ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCccccceeecC-cc-EEEEeeEEEeceeEEcCC------
Confidence 688999999999986432 23446666 46789999999999888888876 33 489999998765555543
Q ss_pred CCcEEeEEEEeeEEecCCc----eEEEEeec-CCCCeEEeEEEEceEEcCC
Q 040748 428 RACVSNITVRDSVIKVSNN----GVRIKTWQ-GGSGAVSGITFSNIHMNNV 473 (584)
Q Consensus 428 ~~~v~nI~I~Nit~~~s~~----GI~Iks~~-g~~G~V~NItf~NI~i~~v 473 (584)
....|+||++..... .-.|-... .....-....|.|++|...
T Consensus 159 ----~~avf~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~ 205 (317)
T 1xg2_A 159 ----AAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIAS 205 (317)
T ss_dssp ----CEEEEESCEEEECCCSTTCCEEEEEECCCCTTSCCEEEEESCEEEEC
T ss_pred ----ceEEEeeeEEEEeccCCCCccEEEecCcCCCCCCcEEEEECCEEecC
Confidence 147899999985321 11222211 1123345678999999754
No 74
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=95.16 E-value=0.1 Score=57.15 Aligned_cols=139 Identities=4% Similarity=-0.061 Sum_probs=95.2
Q ss_pred eecCceEeeeeEecC-CCceeeeeccccEEEEeEEEECCCCCCCCCceeecCcccEEEEceEEecC-----CCcEEeCCC
Q 040748 327 MSSNLTVQRLRIKDS-PQFHFRFDNCKNVHIESIHITAPALSPNTDGIHIENTNGVEIYNSVISNG-----DDCVSIGSG 400 (584)
Q Consensus 327 ~s~nvtI~gvti~ns-~~~~I~i~~s~nV~I~nv~I~~~~~~~ntDGI~i~~S~nV~I~n~~i~~g-----DDgIai~sg 400 (584)
...+.+|++-.+.+. ....|....+.+.+|++.++... ..||.+..+++.+|++++|... ..||.+..
T Consensus 226 ~s~~~~VenN~f~~~~gg~aim~skS~~n~i~~N~~~~~-----~ggi~l~~~~~s~I~~N~f~gN~~~~~~~Gi~i~~- 299 (506)
T 1dbg_A 226 DIGRCLVDSNLFMRQDSEAEIITSKSQENVYYGNTYLNC-----QGTMNFRHGDHQVAINNFYIGNDQRFGYGGMFVWG- 299 (506)
T ss_dssp CBCCCEEESCEEEEECSSSEEEEEESBSCEEESCEEESC-----SSEEEEEECSSCEEESCEEEECSSSSCBCCEEECS-
T ss_pred ccCCcEEECCEEEeccCcEEEEEEecCCEEEECCEEEcc-----cCcEEEeecCccEEECCEEECCcCccCceEEEEEC-
Confidence 356888887777654 34556667777789999999873 3478888888889999988754 36788865
Q ss_pred ceeEEEEecccCCCC--------cceee--ccCCCCCCCcEEeEEEEeeEEecCCc-eEEEEee----------c-CCCC
Q 040748 401 CYDVDIRNITCGPGH--------GISIG--SLGNHNSRACVSNITVRDSVIKVSNN-GVRIKTW----------Q-GGSG 458 (584)
Q Consensus 401 s~NV~I~Nc~~~~g~--------GI~IG--S~g~~~~~~~v~nI~I~Nit~~~s~~-GI~Iks~----------~-g~~G 458 (584)
. +.+|+|++|.+.. ||.|. ++.. .-..+++++|++++|.++.. ||.|..+ . ....
T Consensus 300 ~-~~~I~nN~f~~~~g~~~~~~~GI~i~~G~~~~--~~~~~~~~~I~~Ntfi~n~~~gI~~~~~~~~~~~~~~g~~~~~~ 376 (506)
T 1dbg_A 300 S-RHVIACNYFELSETIKSRGNAALYLNPGAMAS--EHALAFDMLIANNAFINVNGYAIHFNPLDERRKEYCAANRLKFE 376 (506)
T ss_dssp B-SCEEESCEEEESSBCGGGTSEEEEECCBCTTS--TTCCCBSEEEESCEEESCSSEEEESSTTHHHHHHHHHHTTCCCB
T ss_pred C-CCEEECCEEECCcCccccccccEEEecCCCcc--ccccccCcEEECCEEECCccccEEEccccccccccccccccccc
Confidence 3 4489999887643 45542 1100 12456899999999999986 9999811 0 0112
Q ss_pred eEEeEEEEceEEcCCc
Q 040748 459 AVSGITFSNIHMNNVR 474 (584)
Q Consensus 459 ~V~NItf~NI~i~~v~ 474 (584)
.=.|++|.|+-+.+-.
T Consensus 377 ~p~~~~~~nN~i~~~~ 392 (506)
T 1dbg_A 377 TPHQLMLKGNLFFKDK 392 (506)
T ss_dssp CCCSEEEESCEEECCS
T ss_pred CCCcEEEEccEEEcCC
Confidence 3468889988886643
No 75
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=94.55 E-value=0.26 Score=50.93 Aligned_cols=110 Identities=13% Similarity=0.124 Sum_probs=75.5
Q ss_pred ccccEEEEeEEEECCCCC--CCCCceeecCcccEEEEceEEecCCCcEEeCCCceeEEEEecccCCCCcceeeccCCCCC
Q 040748 350 NCKNVHIESIHITAPALS--PNTDGIHIENTNGVEIYNSVISNGDDCVSIGSGCYDVDIRNITCGPGHGISIGSLGNHNS 427 (584)
Q Consensus 350 ~s~nV~I~nv~I~~~~~~--~ntDGI~i~~S~nV~I~n~~i~~gDDgIai~sgs~NV~I~Nc~~~~g~GI~IGS~g~~~~ 427 (584)
.+++++++|++|.+.... ..+-+|.+ .+.++.++||.|....|.+.... .+ ..++||++.+...+=+|.
T Consensus 92 ~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~~~-~r-~~~~~c~I~G~vDFIfG~------ 162 (319)
T 1gq8_A 92 VGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILAYQDSLYVHS-NR-QFFINCFIAGTVDFIFGN------ 162 (319)
T ss_dssp CSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEECSTTCEEECS-SE-EEEESCEEEESSSCEEES------
T ss_pred ECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECccceeeeecC-cc-EEEEecEEEeeeeEEecC------
Confidence 367999999999986432 23446666 47789999999999888998876 33 589999998765554543
Q ss_pred CCcEEeEEEEeeEEecCCc----eEEEEeecCC--CCeEEeEEEEceEEcCC
Q 040748 428 RACVSNITVRDSVIKVSNN----GVRIKTWQGG--SGAVSGITFSNIHMNNV 473 (584)
Q Consensus 428 ~~~v~nI~I~Nit~~~s~~----GI~Iks~~g~--~G~V~NItf~NI~i~~v 473 (584)
....|+||++..... .-.|-. +++ ...-..+.|.|++|...
T Consensus 163 ----~~a~f~~c~i~~~~~~~~~~~~itA-~~r~~~~~~~G~vf~~c~i~~~ 209 (319)
T 1gq8_A 163 ----AAVVLQDCDIHARRPGSGQKNMVTA-QGRTDPNQNTGIVIQKSRIGAT 209 (319)
T ss_dssp ----CEEEEESCEEEECCCSTTCCEEEEE-ECCCSTTCCCEEEEESCEEEEC
T ss_pred ----CcEEEEeeEEEEecCCCCCceEEEe-CCCCCCCCCceEEEECCEEecC
Confidence 147899999985321 112322 221 23345688999999754
No 76
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=94.46 E-value=0.62 Score=44.38 Aligned_cols=136 Identities=16% Similarity=0.184 Sum_probs=93.4
Q ss_pred EEeecCceEeeeeEecCCCceeeeeccccEEEEeEEEECCCCCCCCCceeecCcccEEEEceEEecCCCcEEeCCCceeE
Q 040748 325 FFMSSNLTVQRLRIKDSPQFHFRFDNCKNVHIESIHITAPALSPNTDGIHIENTNGVEIYNSVISNGDDCVSIGSGCYDV 404 (584)
Q Consensus 325 f~~s~nvtI~gvti~ns~~~~I~i~~s~nV~I~nv~I~~~~~~~ntDGI~i~~S~nV~I~n~~i~~gDDgIai~sgs~NV 404 (584)
|.--...+|+|+.|-....-+||..+ +.+|+|+.+.. -..|.+.+.++..++|.+.-.++.+|-|.-..+...+
T Consensus 48 F~le~GaTLkNvIIG~~~~dGIHC~G--~ctl~NVwwed----VcEDA~T~kg~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv 121 (196)
T 3t9g_A 48 FKLEKGANLKNVIIGAPGCDGIHCYG--DNVVENVVWED----VGEDALTVKSEGVVEVIGGSAKEAADKVFQLNAPCTF 121 (196)
T ss_dssp EEECTTCEEEEEEECSCCTTCEEECS--SEEEEEEEESS----CCSCSEEECSSEEEEEESCEEEEEEEEEEEECSSEEE
T ss_pred EEEcCCCEEEEEEECCCCcCcEEEcC--CEeEEEEEeee----eeceeeEEcCCCeEEEECCCccCCCceEEEECCCceE
Confidence 33356789999999777778898864 78899998887 4678899887778999999998888876555556778
Q ss_pred EEEecccCCCCcceeeccCCCCCCCcEEeEEEEeeEEecCCceEEEEeecCCCCeEEeEEEEceEEcCCcc
Q 040748 405 DIRNITCGPGHGISIGSLGNHNSRACVSNITVRDSVIKVSNNGVRIKTWQGGSGAVSGITFSNIHMNNVRN 475 (584)
Q Consensus 405 ~I~Nc~~~~g~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~~GI~Iks~~g~~G~V~NItf~NI~i~~v~~ 475 (584)
.|+|.+..+ .|--+-|-|. ...-++|.|+|+++.+....| +++.. .-..+.+.|+++.++..
T Consensus 122 ~I~nF~~~~-~GKl~RSCGn---c~~~r~v~i~~v~~~n~k~~l-~rtdS----~~~~~~~~n~~~~~~~~ 183 (196)
T 3t9g_A 122 KVKNFTATN-IGKLVRQNGN---TTFKVVIYLEDVTLNNVKSCV-AKSDS----PVSELWYHNLNVNNCKT 183 (196)
T ss_dssp EEEEEEEEE-EEEEEEECTT---CCSCEEEEEEEEEEEEEEEEE-EECCC----TTCEEEEEEEEEEEEEE
T ss_pred EEeeEEEcc-CCEEEEcCCC---CCceeEEEEeCeEEeCCEEEE-EEcCC----CCCEEEEecceecCCCc
Confidence 888877642 2311112221 123479999999998865443 33322 12466777777766543
No 77
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=93.44 E-value=1.1 Score=42.85 Aligned_cols=127 Identities=21% Similarity=0.320 Sum_probs=74.2
Q ss_pred cEEEEeEEEECCCCCCCCCceeecCcccEEEEceEEe-cCCCcEEeCCCceeEEEEecccCCCCc--ceeeccCCCCCCC
Q 040748 353 NVHIESIHITAPALSPNTDGIHIENTNGVEIYNSVIS-NGDDCVSIGSGCYDVDIRNITCGPGHG--ISIGSLGNHNSRA 429 (584)
Q Consensus 353 nV~I~nv~I~~~~~~~ntDGI~i~~S~nV~I~n~~i~-~gDDgIai~sgs~NV~I~Nc~~~~g~G--I~IGS~g~~~~~~ 429 (584)
+.+++|+.|-. ...||||..+ +.+|+|++.. .+.|++.++. ...++|.+.-..++.. |..-.
T Consensus 49 GaTLkNvIIG~----~~~dGIHC~G--~CtleNVwwedVcEDA~T~k~-~g~~~I~GGgA~~A~DKV~Q~Ng-------- 113 (197)
T 1ee6_A 49 GASLKNVVIGA----PAADGVHCYG--DCTITNVIWEDVGEDALTLKS-SGTVNISGGAAYKAYDKVFQINA-------- 113 (197)
T ss_dssp TEEEEEEEECS----SCTTCEEEES--CEEEEEEEESSCCSCSEEEEE-SEEEEEESCEEEEEEEEEEEECS--------
T ss_pred CCEEEEEEEcC----CCcccEEEcC--ceeEEEEEeeeccccccEEcC-CCeEEEECCCccCCCccEEEecC--------
Confidence 56666676654 3567888765 4788888776 4778888874 4566666655544332 33211
Q ss_pred cEEeEEEEeeEEecCCceEEEEeecCCCCeEEeEEEEceEEcCCcccEEEEEeecCCCCCCCCCCCeeEEeEEEEeEE
Q 040748 430 CVSNITVRDSVIKVSNNGVRIKTWQGGSGAVSGITFSNIHMNNVRNPIIIDQYYCLTKDCTNKTSAVYVSDILYSNIK 507 (584)
Q Consensus 430 ~v~nI~I~Nit~~~s~~GI~Iks~~g~~G~V~NItf~NI~i~~v~~~I~I~~~y~~~~~~~~~~~~~~I~nItf~NI~ 507 (584)
--.+.|+|.++.+ .|=...++ |....-++|.++|+.+.+.+..|...-. ......+.|+.+.++.
T Consensus 114 -~Gtv~I~nF~~~~--~GKl~RSc-Gnc~~~r~v~i~~v~~~~~k~~i~~~ds---------~gdtati~n~~~~~v~ 178 (197)
T 1ee6_A 114 -AGTINIRNFRADD--IGKLVRQN-GGTTYKVVMNVENCNISRVKDAILRTDS---------STSTGRIVNTRYSNVP 178 (197)
T ss_dssp -SEEEEEESCEEEE--EEEEEEEC-TTCCSCEEEEEESCEEEEEEEEEEECCC---------TTCEEEEESCEEESCS
T ss_pred -CceEEEeeEEEcc--CCEEEEcC-CCCccceEEEEeceEEECceEEEEEecC---------CCCEEEEEecccCCcc
Confidence 1246666666543 34334443 2222336788888887776554433211 2345677888887776
No 78
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=93.18 E-value=0.63 Score=44.44 Aligned_cols=135 Identities=14% Similarity=0.138 Sum_probs=91.1
Q ss_pred EEeecCceEeeeeEecCCCceeeeeccccEEEEeEEEECCCCCCCCCceeecCcccEEEEceEEecCCCcEEeCCCceeE
Q 040748 325 FFMSSNLTVQRLRIKDSPQFHFRFDNCKNVHIESIHITAPALSPNTDGIHIENTNGVEIYNSVISNGDDCVSIGSGCYDV 404 (584)
Q Consensus 325 f~~s~nvtI~gvti~ns~~~~I~i~~s~nV~I~nv~I~~~~~~~ntDGI~i~~S~nV~I~n~~i~~gDDgIai~sgs~NV 404 (584)
|.--...+|++|.|-....-+||..+ +.+|+||.+.. -..|.+.+.++..++|.+.-.++.+|-|.-..+...+
T Consensus 44 F~le~GaTLkNvIIG~~~~dGIHC~G--~CtleNVwwed----VcEDA~T~k~~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv 117 (197)
T 1ee6_A 44 FRLEAGASLKNVVIGAPAADGVHCYG--DCTITNVIWED----VGEDALTLKSSGTVNISGGAAYKAYDKVFQINAAGTI 117 (197)
T ss_dssp EEECTTEEEEEEEECSSCTTCEEEES--CEEEEEEEESS----CCSCSEEEEESEEEEEESCEEEEEEEEEEEECSSEEE
T ss_pred EEecCCCEEEEEEEcCCCcccEEEcC--ceeEEEEEeee----ccccccEEcCCCeEEEECCCccCCCccEEEecCCceE
Confidence 33456889999999777788899876 58999999887 4678888887778899998888888876555566778
Q ss_pred EEEecccCCCCcceeeccCCCCCCCcEEeEEEEeeEEecCCceEEEEeecCCCCeEEeEEEEceEEcCCc
Q 040748 405 DIRNITCGPGHGISIGSLGNHNSRACVSNITVRDSVIKVSNNGVRIKTWQGGSGAVSGITFSNIHMNNVR 474 (584)
Q Consensus 405 ~I~Nc~~~~g~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~~GI~Iks~~g~~G~V~NItf~NI~i~~v~ 474 (584)
.|+|.+.. ..|=-.-|-|. ...-++|.|+|+++.+....|......+ ..+++.|+...++.
T Consensus 118 ~I~nF~~~-~~GKl~RScGn---c~~~r~v~i~~v~~~~~k~~i~~~ds~g-----dtati~n~~~~~v~ 178 (197)
T 1ee6_A 118 NIRNFRAD-DIGKLVRQNGG---TTYKVVMNVENCNISRVKDAILRTDSST-----STGRIVNTRYSNVP 178 (197)
T ss_dssp EEESCEEE-EEEEEEEECTT---CCSCEEEEEESCEEEEEEEEEEECCCTT-----CEEEEESCEEESCS
T ss_pred EEeeEEEc-cCCEEEEcCCC---CccceEEEEeceEEECceEEEEEecCCC-----CEEEEEecccCCcc
Confidence 88886653 22211111111 1123799999999988654433222222 35566776665554
No 79
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=92.95 E-value=0.77 Score=47.76 Aligned_cols=112 Identities=6% Similarity=0.022 Sum_probs=73.8
Q ss_pred ccccEEEEeEEEECCCC--------------CCCCC--ceee-cCcccEEEEceEEecCCCcEEeCCCceeEEEEecccC
Q 040748 350 NCKNVHIESIHITAPAL--------------SPNTD--GIHI-ENTNGVEIYNSVISNGDDCVSIGSGCYDVDIRNITCG 412 (584)
Q Consensus 350 ~s~nV~I~nv~I~~~~~--------------~~ntD--GI~i-~~S~nV~I~n~~i~~gDDgIai~sgs~NV~I~Nc~~~ 412 (584)
.+++++++|++|.+... ..... +|.+ ..+.++.++||.|....|.+.... .+..++||++.
T Consensus 94 ~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~QDTLy~~~--gr~~~~~c~I~ 171 (342)
T 2nsp_A 94 SAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQATLYVSG--GRSFFSDCRIS 171 (342)
T ss_dssp CSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECSTTCEEECS--SEEEEESCEEE
T ss_pred ECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecccceEEECC--CCEEEEcCEEE
Confidence 46799999999998641 11223 4421 357789999999999888888875 47889999998
Q ss_pred CCCcceeeccCCCCCCCcEEeEEEEeeEEecCCc---e-----EEEEeecCCCCeEEeEEEEceEEcCC
Q 040748 413 PGHGISIGSLGNHNSRACVSNITVRDSVIKVSNN---G-----VRIKTWQGGSGAVSGITFSNIHMNNV 473 (584)
Q Consensus 413 ~g~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~~---G-----I~Iks~~g~~G~V~NItf~NI~i~~v 473 (584)
+...+=+|. -...|+||++..... + -.|-........-..+.|.|++|...
T Consensus 172 G~vDFIFG~----------a~a~f~~c~i~~~~~~~~~~~~~~g~ItA~~~~~~~~~G~vf~~c~i~~~ 230 (342)
T 2nsp_A 172 GTVDFIFGD----------GTALFNNCDLVSRYRADVKSGNVSGYLTAPSTNINQKYGLVITNSRVIRE 230 (342)
T ss_dssp ESEEEEEES----------SEEEEESCEEEECCCTTSCTTSCCEEEEEECCBTTCSCCEEEESCEEEES
T ss_pred eceEEEeCC----------ceEEEecCEEEEecCcccccccCceEEEccCCCCCCCCEEEEEcCEEecC
Confidence 776655554 147899999975321 0 22322211112233478999998754
No 80
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=91.52 E-value=1.6 Score=45.83 Aligned_cols=112 Identities=12% Similarity=0.063 Sum_probs=75.8
Q ss_pred ccccEEEEeEEEECCCC----------------CCCCCceeec-CcccEEEEceEEecCCCcEEeCCCceeEEEEecccC
Q 040748 350 NCKNVHIESIHITAPAL----------------SPNTDGIHIE-NTNGVEIYNSVISNGDDCVSIGSGCYDVDIRNITCG 412 (584)
Q Consensus 350 ~s~nV~I~nv~I~~~~~----------------~~ntDGI~i~-~S~nV~I~n~~i~~gDDgIai~sgs~NV~I~Nc~~~ 412 (584)
.++++.++|++|.+... ..-+-++.+. .+..+.++||.|....|.+.... ..+..+++|+|.
T Consensus 120 ~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~~~-~gr~yf~~c~I~ 198 (364)
T 3uw0_A 120 NAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDTLYSKT-GSRSYFSDCEIS 198 (364)
T ss_dssp CSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSCEEECT-TCEEEEESCEEE
T ss_pred ECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccceEeCC-CCCEEEEcCEEE
Confidence 56799999999998742 1123355554 47889999999999889998863 368899999999
Q ss_pred CCCcceeeccCCCCCCCcEEeEEEEeeEEecCC------ceEEEEeecCCCCeEEeEEEEceEEcC
Q 040748 413 PGHGISIGSLGNHNSRACVSNITVRDSVIKVSN------NGVRIKTWQGGSGAVSGITFSNIHMNN 472 (584)
Q Consensus 413 ~g~GI~IGS~g~~~~~~~v~nI~I~Nit~~~s~------~GI~Iks~~g~~G~V~NItf~NI~i~~ 472 (584)
+...+=+|. -...|+||++.... .+-.|-........-..+.|.|++|..
T Consensus 199 GtvDFIFG~----------a~a~f~~c~i~~~~~~~~~~~~g~ITA~~~~~~~~~G~vf~~c~i~~ 254 (364)
T 3uw0_A 199 GHVDFIFGS----------GITVFDNCNIVARDRSDIEPPYGYITAPSTLTTSPYGLIFINSRLTK 254 (364)
T ss_dssp ESEEEEEES----------SEEEEESCEEEECCCSSCSSCCEEEEEECCCTTCSCCEEEESCEEEE
T ss_pred cCCCEECCc----------ceEEEEeeEEEEeccCcccCCccEEEeCCcCCCCCcEEEEEeeEEec
Confidence 776665653 15689999997531 112232221111222457899999974
No 81
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=91.36 E-value=3.1 Score=42.79 Aligned_cols=50 Identities=16% Similarity=0.126 Sum_probs=29.6
Q ss_pred EEEEeEEEECCCCCCCCCceeec-CcccEEEEceEEe-cCCCcEEeCCCceeEEEEeccc
Q 040748 354 VHIESIHITAPALSPNTDGIHIE-NTNGVEIYNSVIS-NGDDCVSIGSGCYDVDIRNITC 411 (584)
Q Consensus 354 V~I~nv~I~~~~~~~ntDGI~i~-~S~nV~I~n~~i~-~gDDgIai~sgs~NV~I~Nc~~ 411 (584)
.+++|+.|-. ...||||.. + +.+|+|++.. .+.|++.++. ..++|.+.-.
T Consensus 160 atlkNvIiG~----~~~dGIHC~~G--~CtleNVwwedVcEDA~T~kg--~~~~I~GGgA 211 (344)
T 3b4n_A 160 TVKNLRISAS----GGADGIHCDSG--NCTIENVIWEDICEDAATNNG--KTMTIVGGIA 211 (344)
T ss_dssp EEEEEEECTT----CCTTCEEEEES--EEEEEEEEESSCSSCSEEECS--SEEEEESCEE
T ss_pred cEEEEEEecC----CCccceEEccC--CeeEEEEeehhcccccceecC--ceEEEECchh
Confidence 4455555533 356777766 4 4677777775 4777777774 3455555443
No 82
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=89.86 E-value=0.11 Score=55.14 Aligned_cols=40 Identities=25% Similarity=0.318 Sum_probs=32.4
Q ss_pred ccccCCCCcchHHHHHHHHHHHhhcCCcEEEEcCCeEEEeeee
Q 040748 195 FGAVGDGISDDTEAFKMTWDSACQKDFAVIHVPYGFSFMIQST 237 (584)
Q Consensus 195 ~GA~gdg~tDdT~Aiq~Ai~~a~~~~g~~v~~p~G~tY~i~~~ 237 (584)
=||+|||++|||+||.+|+.++ .++.++=-.|.||.++++
T Consensus 4 ~~a~gdgvtddt~a~~~~l~~~---~~~~~IDG~G~T~kVs~l 43 (670)
T 3ju4_A 4 GSAKGDGVTDDTAALTSALNDT---PVGQKINGNGKTYKVTSL 43 (670)
T ss_dssp CCCCCEEEEECHHHHHHHHHHS---CTTSCEECTTCEEECSSC
T ss_pred CcccCCCccCcHHHHHHHhccC---CCCeEEeCCCceEEeeeC
Confidence 4899999999999999999753 344556667889999876
No 83
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=87.11 E-value=3.1 Score=42.86 Aligned_cols=141 Identities=14% Similarity=0.090 Sum_probs=78.3
Q ss_pred eEEecCeEEeCCCCccccCCCCCCCCCCCCCCCCCCCCCeeEEEEeecCceEeeeeEecCCCceeeee-ccccEEEEeEE
Q 040748 282 LSLQGGGTIDGRGHKWWDLPCKPHKGINGTTSPGPCDSPIALRFFMSSNLTVQRLRIKDSPQFHFRFD-NCKNVHIESIH 360 (584)
Q Consensus 282 VtI~G~G~IDGnG~~ww~~~~~~~~g~~g~~~~g~~~rP~~I~f~~s~nvtI~gvti~ns~~~~I~i~-~s~nV~I~nv~ 360 (584)
.+|.| +++||.+..| ...+.. . .+...| +|.+. ..-+++++.|-.....+||.. + +.+|+||.
T Consensus 125 ~~i~g-~t~Dgg~k~~-~~~c~~---q------~E~q~~-vF~le--~GatlkNvIiG~~~~dGIHC~~G--~CtleNVw 188 (344)
T 3b4n_A 125 ATFEN-RTVDCGGVTI-GTSCPN---D------SDKQKP-LIILK--NATVKNLRISASGGADGIHCDSG--NCTIENVI 188 (344)
T ss_dssp EEEES-SEEECTTCEE-CCCCCT---T------CSCCCC-SEEEE--SCEEEEEEECTTCCTTCEEEEES--EEEEEEEE
T ss_pred eeEec-ceEcCCCcEE-CCCCCC---c------cccCcc-EEEEc--cCcEEEEEEecCCCccceEEccC--CeeEEEEe
Confidence 35665 6788888775 221110 0 011334 33333 357889998876677788887 4 57899998
Q ss_pred EECCCCCCCCCceeecCcccEEEEceEEecC-------CCcEEeCCCceeEEEEe-cccC-CCCcceeeccCCCCCCCcE
Q 040748 361 ITAPALSPNTDGIHIENTNGVEIYNSVISNG-------DDCVSIGSGCYDVDIRN-ITCG-PGHGISIGSLGNHNSRACV 431 (584)
Q Consensus 361 I~~~~~~~ntDGI~i~~S~nV~I~n~~i~~g-------DDgIai~sgs~NV~I~N-c~~~-~g~GI~IGS~g~~~~~~~v 431 (584)
+.. -..|.+.+.+ ..++|.+.-.++. +|-|.=..+...+.|.| .++. ...|=-+-|-|.-...+.-
T Consensus 189 wed----VcEDA~T~kg-~~~~I~GGgA~~a~~g~~g~~DKV~Q~Ng~gtv~I~~~~F~~~~~~GKl~RSCGnC~~~~~~ 263 (344)
T 3b4n_A 189 WED----ICEDAATNNG-KTMTIVGGIAHNAKDGYGGKPDKVLQHNSKNSTTVVKGNFTLTGEHGKLWRSCGDCSNNGGP 263 (344)
T ss_dssp ESS----CSSCSEEECS-SEEEEESCEEEECTTCTTSSCCEEEEECCSSEEEEEETTEEEEEEEEEEEEECSSCTTCCCC
T ss_pred ehh----cccccceecC-ceEEEECchhccccccccCCCCcEEEeCCCccEEEecCceEEEccCCeEeEccCCcccCCcc
Confidence 887 4567887774 4677777777665 55554334445666664 3222 1222111111110012234
Q ss_pred EeEEEEeeEEec
Q 040748 432 SNITVRDSVIKV 443 (584)
Q Consensus 432 ~nI~I~Nit~~~ 443 (584)
++|+|+|+++.+
T Consensus 264 R~v~i~nv~~~g 275 (344)
T 3b4n_A 264 RFLTVTSATVNG 275 (344)
T ss_dssp EEEEESSEEEEE
T ss_pred eEEEEeceEEeC
Confidence 677777777643
No 84
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=75.12 E-value=77 Score=32.91 Aligned_cols=67 Identities=18% Similarity=0.224 Sum_probs=37.6
Q ss_pred ceeEEEEecccCCC--CcceeeccCC--CC-------------CCCcEEeEEEEeeEEecCCceEEEEeecCCCCeEEeE
Q 040748 401 CYDVDIRNITCGPG--HGISIGSLGN--HN-------------SRACVSNITVRDSVIKVSNNGVRIKTWQGGSGAVSGI 463 (584)
Q Consensus 401 s~NV~I~Nc~~~~g--~GI~IGS~g~--~~-------------~~~~v~nI~I~Nit~~~s~~GI~Iks~~g~~G~V~NI 463 (584)
+.|..+++...-.. +|+.+|+-.. .+ -..--.|=.|.|+.+.++- |+.+.. +|.+++|+||
T Consensus 269 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsL-GVG~GM-DG~G~YVSNi 346 (559)
T 2vfm_A 269 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGAL-GVGFGM-DGKGMYVSNI 346 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECCS-SEEEEE-EEESCEEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeeccc-ceeeee-cCCCceEeee
Confidence 35777777654332 5666665411 00 0111235567777777753 555544 4556788888
Q ss_pred EEEceE
Q 040748 464 TFSNIH 469 (584)
Q Consensus 464 tf~NI~ 469 (584)
+++++.
T Consensus 347 tv~DCA 352 (559)
T 2vfm_A 347 TVEDCA 352 (559)
T ss_dssp EEESCS
T ss_pred Eehhcc
Confidence 887753
No 85
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=71.86 E-value=86 Score=32.59 Aligned_cols=36 Identities=28% Similarity=0.374 Sum_probs=23.0
Q ss_pred EeEEEEeeEEecCCceEEEEeecCCCCeEEeEEEEceE
Q 040748 432 SNITVRDSVIKVSNNGVRIKTWQGGSGAVSGITFSNIH 469 (584)
Q Consensus 432 ~nI~I~Nit~~~s~~GI~Iks~~g~~G~V~NItf~NI~ 469 (584)
.|=.|.|+.+.++- |+.+.. +|.+++|+||+++++.
T Consensus 320 ~NHliDnllv~gsL-GVG~GM-DG~G~YVSNitv~DCA 355 (559)
T 2v5i_A 320 NNHLVDNILVMNSL-GVGLGM-DGSGGYVSNVTVQDCA 355 (559)
T ss_dssp CCCEEEEEEEESCS-SEEEEE-EEESCEEEEEEEESCS
T ss_pred chhhhhhheeeccc-ceeeee-cCCCceEeeeEehhcc
Confidence 35567777777653 555544 3456788888877753
No 86
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=66.00 E-value=1e+02 Score=33.31 Aligned_cols=35 Identities=23% Similarity=0.269 Sum_probs=20.2
Q ss_pred eEEEEeeEEecCCceEEEEeecCCCCeEEeEEEEceE
Q 040748 433 NITVRDSVIKVSNNGVRIKTWQGGSGAVSGITFSNIH 469 (584)
Q Consensus 433 nI~I~Nit~~~s~~GI~Iks~~g~~G~V~NItf~NI~ 469 (584)
|=.|.|+.+.++- |+.+.. +|.+++|+||+++++.
T Consensus 425 nhlidn~~v~~sl-gvg~gm-dg~g~yvsnitv~dca 459 (666)
T 2xc1_A 425 NHLIDNLLVRGAL-GVGFGM-DGKGMYVSNITVEDCA 459 (666)
T ss_dssp CCEEEEEEEESCS-SEEEEE-EEESCEEEEEEEESCS
T ss_pred hhhhhhheeeccc-ceeeee-cCCCceEeeeEehhcc
Confidence 4566666666653 444443 3445677777776653
No 87
>3kl4_B DPAP B, YSCV, signal peptide of yeast dipeptidyl aminopeptidase; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Saccharomyces cerevisiae}
Probab=63.74 E-value=2.1 Score=29.48 Aligned_cols=28 Identities=43% Similarity=0.803 Sum_probs=15.0
Q ss_pred eeeeeehhhhhhheeeeeeccccccccccccccc
Q 040748 6 RVSILIFCICFLGFILSVQARRHHSIKHKHTHHH 39 (584)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 (584)
||.|++..+ ..|-+|-. -||.|.|.|||
T Consensus 15 rvgiilvll-iwgtvlll-----ksiphhhhhhh 42 (42)
T 3kl4_B 15 RVGIILVLL-IWGTVLLL-----KSIPHHHHHHH 42 (42)
T ss_pred EeeeehhHH-HHHHHHHh-----hcCccccccCC
Confidence 555544333 33444433 36777777776
No 88
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=57.78 E-value=1.1e+02 Score=33.05 Aligned_cols=82 Identities=23% Similarity=0.305 Sum_probs=50.2
Q ss_pred cccEEEEceEEe-cCCCcEEeCCC-----------------------ceeEEEEecccCCCCcceeeccCCCCCCCcEEe
Q 040748 378 TNGVEIYNSVIS-NGDDCVSIGSG-----------------------CYDVDIRNITCGPGHGISIGSLGNHNSRACVSN 433 (584)
Q Consensus 378 S~nV~I~n~~i~-~gDDgIai~sg-----------------------s~NV~I~Nc~~~~g~GI~IGS~g~~~~~~~v~n 433 (584)
+-|..+++.... .-.||+.+++. -.|-.|.|..+.++-|+.+|.-| .++.++|
T Consensus 376 nynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~slgvg~gmdg---~g~yvsn 452 (666)
T 2xc1_A 376 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDG---KGMYVSN 452 (666)
T ss_dssp CBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESCSSEEEEEEE---ESCEEEE
T ss_pred ccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecC---CCceEee
Confidence 556777777643 45778888762 24667888888777777776554 3567777
Q ss_pred EEEEeeEEecCCceEEEEeecCCCCeEEeEEEEceE
Q 040748 434 ITVRDSVIKVSNNGVRIKTWQGGSGAVSGITFSNIH 469 (584)
Q Consensus 434 I~I~Nit~~~s~~GI~Iks~~g~~G~V~NItf~NI~ 469 (584)
|+++||- ..|+.+-+.. -.++||++-+..
T Consensus 453 itv~dca----g~g~~~~~~~---~~ftni~vid~n 481 (666)
T 2xc1_A 453 ITVEDCA----GSGAYLLTHE---SVFTNIAIIDTN 481 (666)
T ss_dssp EEEESCS----SEEEEEEEES---CEEEEEEEESCC
T ss_pred eEehhcc----CcceEEeecc---ceeeeeEEEecc
Confidence 7777764 2355544421 134455544433
No 89
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=43.06 E-value=1.6e+02 Score=31.30 Aligned_cols=80 Identities=18% Similarity=0.152 Sum_probs=48.7
Q ss_pred cccEEEEceE-EecCCCcEEeCCC---------------------ceeEEEEecccCCCCcceeeccCCCCCCCcEEeEE
Q 040748 378 TNGVEIYNSV-ISNGDDCVSIGSG---------------------CYDVDIRNITCGPGHGISIGSLGNHNSRACVSNIT 435 (584)
Q Consensus 378 S~nV~I~n~~-i~~gDDgIai~sg---------------------s~NV~I~Nc~~~~g~GI~IGS~g~~~~~~~v~nI~ 435 (584)
|-|..++|+. |..-.|||.+.+. -.|-.|+|....++.|+.+|.-| ..+.++||+
T Consensus 262 nYnLqF~d~~~i~~~~DG~Dl~aD~g~pe~R~~D~~laqYp~~qLP~nHii~Ni~~~~~lGVG~~~DG---~~~~v~ni~ 338 (543)
T 3riq_A 262 NYRLVFDNITTIQCYYDGIDVNADTGSPTERVDDYTLAEYPWFQLPTQHIIRNIITRDCMGIGAWWDG---QKNIIDNVV 338 (543)
T ss_dssp CBSCEEEEEEEESCSSCSCEECSCCSSCCCCSSSCCTTTSCTTCCCCCCEEEEEEEESCSSCSSEECS---SSCEEEEEE
T ss_pred eeeEEEeccceEEEeecceeccCCCCCCccCCCCcchhhCchhhCchhhhhhhhheeccceeeeeecC---CCCeEeeEE
Confidence 5567777765 4566778887661 23556788777777787776554 466777777
Q ss_pred EEeeEEecCCceEEEEeecCCCCeEEeEEEEc
Q 040748 436 VRDSVIKVSNNGVRIKTWQGGSGAVSGITFSN 467 (584)
Q Consensus 436 I~Nit~~~s~~GI~Iks~~g~~G~V~NItf~N 467 (584)
+++|- ..|+.+++ ..-.++||++-+
T Consensus 339 ~~dca----g~G~~~~~---~~~~ftNitvI~ 363 (543)
T 3riq_A 339 TYEAH----KEGMFDRG---TNNDITNITVVC 363 (543)
T ss_dssp EESCS----SCSEEECS---SSCEEEEEEEES
T ss_pred eeccc----cCcceeec---cCcceeeEEEEe
Confidence 66653 23555543 222455555543
No 90
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=36.46 E-value=4e+02 Score=28.17 Aligned_cols=80 Identities=20% Similarity=0.214 Sum_probs=43.1
Q ss_pred EEEeecCceEeeeeEecCCCc----------eeeeeccccEEEEeEEEECCCCCCCCCceeec-----------CcccEE
Q 040748 324 RFFMSSNLTVQRLRIKDSPQF----------HFRFDNCKNVHIESIHITAPALSPNTDGIHIE-----------NTNGVE 382 (584)
Q Consensus 324 ~f~~s~nvtI~gvti~ns~~~----------~I~i~~s~nV~I~nv~I~~~~~~~ntDGI~i~-----------~S~nV~ 382 (584)
.+...+++.++||+|+|.... .+.+ ..+.+.+.+|+|... .|-+... ....-.
T Consensus 196 ~~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v-~gDr~~fy~C~f~G~-----QDTLy~~~~~~~~~~~~d~~gRqy 269 (422)
T 3grh_A 196 FWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRT-DGDQVQINNVNILGR-----QNTFFVTNSGVQNRLETNRQPRTL 269 (422)
T ss_dssp EEECCTTCEEEEEEEEETTGGGSCSSCCCCCSEEE-CCSSEEEEEEEEECS-----TTCEEECCCCTTCSCCSSCCCEEE
T ss_pred EEEECCCEEEEeeEEEeCCCCCCCCCCCceEEEEe-cCCcEEEEeeEEEee-----cceeeeccccccccccccccccEE
Confidence 445678899999999886432 1222 345666666666653 2233321 122445
Q ss_pred EEceEEecCCCcEEeCCCceeEEEEecccC
Q 040748 383 IYNSVISNGDDCVSIGSGCYDVDIRNITCG 412 (584)
Q Consensus 383 I~n~~i~~gDDgIai~sgs~NV~I~Nc~~~ 412 (584)
+++|+|...-|-| ++ .....+++|++.
T Consensus 270 y~~CyIeGtVDFI-FG--~a~AvFe~C~I~ 296 (422)
T 3grh_A 270 VTNSYIEGDVDIV-SG--RGAVVFDNTEFR 296 (422)
T ss_dssp EESCEEEESEEEE-EE--SSEEEEESCEEE
T ss_pred EEecEEeccccEE-cc--CceEEEEeeEEE
Confidence 6666665544432 22 234556666554
No 91
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=35.59 E-value=1.4e+02 Score=31.71 Aligned_cols=67 Identities=16% Similarity=0.252 Sum_probs=37.7
Q ss_pred ceeEEEEecccCCC--CcceeeccCCCC-------------CCCcEEeEEEEeeEEecCCceEEEEeecCCCCeEEeEEE
Q 040748 401 CYDVDIRNITCGPG--HGISIGSLGNHN-------------SRACVSNITVRDSVIKVSNNGVRIKTWQGGSGAVSGITF 465 (584)
Q Consensus 401 s~NV~I~Nc~~~~g--~GI~IGS~g~~~-------------~~~~v~nI~I~Nit~~~s~~GI~Iks~~g~~G~V~NItf 465 (584)
+.|..++|...-.. +|+.+|+-.... -..--.|=.|+|+..+++. |+.+. |+|.+++|+||+.
T Consensus 262 nYnLqF~d~~~i~~~~DG~Dl~aD~g~pe~R~~D~~laqYp~~qLP~nHii~Ni~~~~~l-GVG~~-~DG~~~~v~ni~~ 339 (543)
T 3riq_A 262 NYRLVFDNITTIQCYYDGIDVNADTGSPTERVDDYTLAEYPWFQLPTQHIIRNIITRDCM-GIGAW-WDGQKNIIDNVVT 339 (543)
T ss_dssp CBSCEEEEEEEESCSSCSCEECSCCSSCCCCSSSCCTTTSCTTCCCCCCEEEEEEEESCS-SCSSE-ECSSSCEEEEEEE
T ss_pred eeeEEEeccceEEEeecceeccCCCCCCccCCCCcchhhCchhhCchhhhhhhhheeccc-eeeee-ecCCCCeEeeEEe
Confidence 45777777654433 567666522110 1111235567777777753 43332 3567788888887
Q ss_pred EceE
Q 040748 466 SNIH 469 (584)
Q Consensus 466 ~NI~ 469 (584)
+++.
T Consensus 340 ~dca 343 (543)
T 3riq_A 340 YEAH 343 (543)
T ss_dssp ESCS
T ss_pred eccc
Confidence 7654
No 92
>4ec6_A Putative uncharacterized protein; GRAM-positive, conjugation, NTF2-like, unknown function; 2.50A {Enterococcus faecalis}
Probab=35.41 E-value=7.9 Score=35.69 Aligned_cols=13 Identities=54% Similarity=1.175 Sum_probs=0.0
Q ss_pred cccccccccceec
Q 040748 32 KHKHTHHHNTYEF 44 (584)
Q Consensus 32 ~~~~~~~~~~~~~ 44 (584)
||.|.|||..|..
T Consensus 2 ~~~~~~~~~~~~~ 14 (161)
T 4ec6_A 2 KHHHHHHHSDYDI 14 (161)
T ss_dssp -------------
T ss_pred CcccccccccCCC
Confidence 4555556655543
No 93
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=33.37 E-value=1.3e+02 Score=31.39 Aligned_cols=82 Identities=23% Similarity=0.305 Sum_probs=50.6
Q ss_pred cccEEEEceEEe-cCCCcEEeCCC-----------------------ceeEEEEecccCCCCcceeeccCCCCCCCcEEe
Q 040748 378 TNGVEIYNSVIS-NGDDCVSIGSG-----------------------CYDVDIRNITCGPGHGISIGSLGNHNSRACVSN 433 (584)
Q Consensus 378 S~nV~I~n~~i~-~gDDgIai~sg-----------------------s~NV~I~Nc~~~~g~GI~IGS~g~~~~~~~v~n 433 (584)
+-|..+++.... .-.|++.+++. -.|-.|.|..+.++-|+.+|.-+ .+++++|
T Consensus 269 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsLGVG~GMDG---~G~YVSN 345 (559)
T 2vfm_A 269 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDG---KGMYVSN 345 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECCSSEEEEEEE---ESCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecC---CCceEee
Confidence 556777777654 45778888762 24667888888777777776554 3567777
Q ss_pred EEEEeeEEecCCceEEEEeecCCCCeEEeEEEEceE
Q 040748 434 ITVRDSVIKVSNNGVRIKTWQGGSGAVSGITFSNIH 469 (584)
Q Consensus 434 I~I~Nit~~~s~~GI~Iks~~g~~G~V~NItf~NI~ 469 (584)
|+++||- ..|+.+-+.. -.+.||++-+..
T Consensus 346 itv~DCA----GsG~~~~t~~---~~FtNi~vID~N 374 (559)
T 2vfm_A 346 ITVEDCA----GSGAYLLTHE---SVFTNIAIIDTN 374 (559)
T ss_dssp EEEESCS----SEEEEEEEES---CEEEEEEEESCC
T ss_pred eEehhcc----CcceEEeecc---ceeeeeEEEecc
Confidence 7777763 2355544421 134455544433
No 94
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=32.46 E-value=1.2e+02 Score=31.40 Aligned_cols=124 Identities=23% Similarity=0.239 Sum_probs=66.8
Q ss_pred cccEEEEceEEe-cCCCcEEeCCC-----------------------ceeEEEEecccCCCCcceeeccCCCCCCCcEEe
Q 040748 378 TNGVEIYNSVIS-NGDDCVSIGSG-----------------------CYDVDIRNITCGPGHGISIGSLGNHNSRACVSN 433 (584)
Q Consensus 378 S~nV~I~n~~i~-~gDDgIai~sg-----------------------s~NV~I~Nc~~~~g~GI~IGS~g~~~~~~~v~n 433 (584)
+-|..+++.... .-.|++.+++. -.|-.|.|..+.++-|+.+|.-+ .++.++|
T Consensus 272 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsLGVG~GMDG---~G~YVSN 348 (559)
T 2v5i_A 272 NYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNSLGVGLGMDG---SGGYVSN 348 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESCSSEEEEEEE---ESCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecC---CCceEee
Confidence 556777777654 45778888762 24667888888777777776554 3567777
Q ss_pred EEEEeeEEecCCceEEEEeecCCCCeEEeEEEEceEEcCCc-ccEEEEEeecCC-----CCCCCCCC--CeeEEeEEEEe
Q 040748 434 ITVRDSVIKVSNNGVRIKTWQGGSGAVSGITFSNIHMNNVR-NPIIIDQYYCLT-----KDCTNKTS--AVYVSDILYSN 505 (584)
Q Consensus 434 I~I~Nit~~~s~~GI~Iks~~g~~G~V~NItf~NI~i~~v~-~~I~I~~~y~~~-----~~~~~~~~--~~~I~nItf~N 505 (584)
|+++||- ..|+.+-+.. -.++||++-+..-.+.. ..|.|...+.-+ +--...+. ...--|-|++.
T Consensus 349 itv~DCA----GsG~~~~t~~---~~FtNi~vID~N~~nF~adQi~I~G~C~VNGlR~~GIk~~~~~Gl~i~APnsTiSG 421 (559)
T 2v5i_A 349 VTVQDCA----GAGMLAHTYN---RVFSNITVIDCNYLNFDSDQIIIIGDCIVNGIRAAGIKPQPSNGLVISAPNSTISG 421 (559)
T ss_dssp EEEESCS----SEEEEEEEES---CEEEEEEEESCCTTCCSSCSEEECSSCEEEEEECCCSSCCCSSSCSEEEEEEEEEE
T ss_pred eEehhcc----CcceEEeecc---ceeeeeEEEecccccCCcceEEEEcceEEcceEEeeeccCCCCceEEeCCCCcccc
Confidence 7777763 2355544421 13445554443333321 234433211100 00001111 23445778888
Q ss_pred EEEeec
Q 040748 506 IKGTYD 511 (584)
Q Consensus 506 I~gt~~ 511 (584)
|++...
T Consensus 422 i~G~V~ 427 (559)
T 2v5i_A 422 LVGNVP 427 (559)
T ss_dssp EESSCC
T ss_pred eeccCC
Confidence 886554
No 95
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=24.96 E-value=3.6e+02 Score=27.51 Aligned_cols=116 Identities=21% Similarity=0.229 Sum_probs=55.0
Q ss_pred CcEEeEEEEeeEEecCCceEEEEeecCCCCeEEeEEEEceEEcCCcc-cEEEEEeecCCCCCCCCCCCeeEEeEEEEeEE
Q 040748 429 ACVSNITVRDSVIKVSNNGVRIKTWQGGSGAVSGITFSNIHMNNVRN-PIIIDQYYCLTKDCTNKTSAVYVSDILYSNIK 507 (584)
Q Consensus 429 ~~v~nI~I~Nit~~~s~~GI~Iks~~g~~G~V~NItf~NI~i~~v~~-~I~I~~~y~~~~~~~~~~~~~~I~nItf~NI~ 507 (584)
+-.++|+|+.+.-.++..|-.+.- .| -++|+++||+|.+++- ++.+-.+ .... .+ +...+++|+
T Consensus 139 g~ls~~ti~~nk~~ds~qg~qvs~-~g----g~dvsv~~i~fsn~~g~gfsliay-p~~~----~p-----~g~~i~~ir 203 (542)
T 2x3h_A 139 GRLSNITVESNKATDTTQGQQVSL-AG----GSDVTVSDVNFSNVKGTGFSLIAY-PNDA----PP-----DGLMIKGIR 203 (542)
T ss_dssp EEEEEEEEECCCSSTTCBCCSEEE-ES----CEEEEEEEEEEEEECSBEEEEEEE-CSSS----CC-----BSCEEEEEE
T ss_pred cceeeEEEecccCCccccceEEEe-cC----CCcceEeeeeeeecCCCceeEEEc-CCCC----CC-----CceEEeccc
Confidence 344555555554444433322211 12 2688888888888764 4444433 2211 12 345566677
Q ss_pred EeecC---CCCC-eEE-ecCCCCceecEEEEe------EEEEcCCCCccccceeecceecCCccccC
Q 040748 508 GTYDI---RSPP-MHF-ACSDTVPCTNLTLSE------VELLPAKGDLVSDPFCWNAYGDLPTLTIP 563 (584)
Q Consensus 508 gt~~~---~~~~-i~i-~~~~~~~~~nItf~N------I~i~~~~g~~~~~~~c~nv~G~~~~~t~~ 563 (584)
+.+.. +..+ ..+ +.+-..-|.+|.-+| |++.+. ...-+.+||-|.--+-..+
T Consensus 204 g~y~g~a~nk~agcvl~dss~nslid~via~nypqfgavelk~~----a~ynivsnvig~~cqhv~y 266 (542)
T 2x3h_A 204 GSYSGYATNKAAGCVLADSSVNSLIDNVIAKNYPQFGAVELKGT----ASYNIVSNVIGADCQHVTY 266 (542)
T ss_dssp EEECSCCTTCSEEEEEEESCBSCEEEEEEEESCCTTEEEEEETT----CBSCEEEEEEEESCSEEEE
T ss_pred cceeccccccccceEEeccchhhhhhhhhhhcCCccceEEeecc----eeeehhhhhhhccceeEEE
Confidence 77552 1112 222 222233355554444 233332 2235788888765444333
No 96
>2yuh_A Tubulin-specific chaperone C; microtubule, beta-tubulin folding, beta-roll, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.95 E-value=1.4e+02 Score=27.68 Aligned_cols=12 Identities=8% Similarity=-0.045 Sum_probs=6.6
Q ss_pred EEEEeecCceEe
Q 040748 323 LRFFMSSNLTVQ 334 (584)
Q Consensus 323 I~f~~s~nvtI~ 334 (584)
+.+.+|++++|.
T Consensus 71 v~i~~C~~~~i~ 82 (179)
T 2yuh_A 71 VFLEDCSDCVLA 82 (179)
T ss_dssp EEEESCBSCEEE
T ss_pred EEEEeCCceEEE
Confidence 555556655553
Done!