BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040753
(198 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SH27|LOR4_ARATH Protein LURP-one-related 4 OS=Arabidopsis thaliana GN=At1g63410
PE=3 SV=1
Length = 215
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 120/201 (59%), Gaps = 21/201 (10%)
Query: 1 MAKVRPLPI--SVEAASKRESFTVWMKSLVMQGNGCTVFNENGEIVYRIDNYDNKGSNEV 58
MA+V P S +++RE+FTVWMKSLV Q NG TV+N NGEI YR++NYD K SNEV
Sbjct: 1 MARVFPQAAISSPYMSTERETFTVWMKSLVYQTNGLTVYNSNGEITYRVENYD-KCSNEV 59
Query: 59 YLMDLRGNVLFTIL-RRVRVFGRLWRGYKGDNDGSNLNKEKPSFEV----TKKGEITLLS 113
++MDL GN+LFTI +++ +FG W Y+ ++ + KP + + G+ +
Sbjct: 60 HIMDLHGNILFTIRKKKLWLFGS-WYVYRECGSFTSTEEVKPCARIKRSSIRDGDWEVRD 118
Query: 114 NNEASCYKLKLEAASATGRTKSAALFKIIDCRRGVVVAEGMRKQSRSGSGVLLGDDVLTL 173
+ L+ + A F+IID G ++A+ KQ S +G+ LG+DVLTL
Sbjct: 119 ETNEVFWILRFDPKFA---------FQIIDI-HGNIIAQVKPKQ--SSNGITLGEDVLTL 166
Query: 174 SVEPHVDRSFIMALVTVYGLM 194
V+P VD S ++ LVTVYGL+
Sbjct: 167 EVKPRVDHSLVVTLVTVYGLI 187
>sp|Q9LUM1|LOR11_ARATH Protein LURP-one-related 11 OS=Arabidopsis thaliana GN=At3g14260
PE=2 SV=1
Length = 230
Score = 127 bits (320), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 112/195 (57%), Gaps = 19/195 (9%)
Query: 14 ASKRESFTVWMKSLVMQGNGCTVFNENGEIVYRIDNYDNKGSNEVYLMDLRGNVLFTILR 73
+++ESFT+WMKSLV NGCTVF+ G I+YR+DNY++K EVYLMDL G+VLFT+ R
Sbjct: 45 TTEQESFTIWMKSLVFNTNGCTVFDSKGNIIYRVDNYNSKSCREVYLMDLSGHVLFTLRR 104
Query: 74 RVRVFGRLWRGYKGDNDGSNLNKEKPSFEVTKKGEITLLSNNEASCYKLKLEAASATGRT 133
+ + W GY+ + + F V K + + + +S Y++ + + R
Sbjct: 105 QKFGLFKTWEGYRSSSATVESTTKLEYFRV-KNNVFQVPNKDSSSSYRVN----AGSCRN 159
Query: 134 KSAALFKII----------DCRRGVVVAEGMRKQSRSGSGVLLGDDVLTLSVEPHVDRSF 183
+K++ +C G ++AE RKQS +G+ LGDDVLT+ VE VD SF
Sbjct: 160 DEQYCYKMVTRGSSLAIEDNC--GKLLAEVKRKQSI--NGLKLGDDVLTMMVESQVDHSF 215
Query: 184 IMALVTVYGLMNRLL 198
I+ LV + L+N +L
Sbjct: 216 IIGLVLAHSLINCIL 230
>sp|Q67XV7|LOR3_ARATH Protein LURP-one-related 3 OS=Arabidopsis thaliana GN=At1g53890
PE=2 SV=2
Length = 217
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 110/214 (51%), Gaps = 35/214 (16%)
Query: 1 MAKVRP---LPISVEA---------ASKRESFTVWMKSLVMQGNGCTVFNENGEIVYRID 48
M K+ P P+ ++ +++E FT+WMKSLV GCTVF+ G ++YR+D
Sbjct: 13 MVKIYPHLAFPVDMDVVQDKILPYLTTEQERFTIWMKSLVFNSKGCTVFDSKGNLIYRVD 72
Query: 49 NYDNKG-SNEVYLMDLRGNVLFTILRRVRVFGRLWRGYKGDNDGSNLNK--------EKP 99
NYD+K SNEVY MDL G +LFT+ ++ F + W GY L K
Sbjct: 73 NYDSKSWSNEVYFMDLNGKILFTLRQKKLGFFKSWEGYNSTGTRFRLRKIFKILPRESSS 132
Query: 100 SFEVTKKGEITLLSNNEASCYKLKLEAASATGRTKSAALFKIIDCRRGVVVAEGMRKQSR 159
S++V I + ++ SCYK+ ++F I D G ++AE K S
Sbjct: 133 SYKVVMGSRI--VDGDQQSCYKI----------VNRGSVFAIKDG-SGRLMAEVKNKLS- 178
Query: 160 SGSGVLLGDDVLTLSVEPHVDRSFIMALVTVYGL 193
SG+ LGDDVLT+ VEP +D S IM +V Y L
Sbjct: 179 DISGLDLGDDVLTMMVEPQLDHSLIMGIVIAYKL 212
>sp|Q8LG32|LOR2_ARATH Protein LURP-one-related 2 OS=Arabidopsis thaliana GN=At1g53870
PE=2 SV=2
Length = 217
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 110/214 (51%), Gaps = 35/214 (16%)
Query: 1 MAKVRP---LPISVEA---------ASKRESFTVWMKSLVMQGNGCTVFNENGEIVYRID 48
M K+ P P+ ++ +++E FT+WMKSLV GCTVF+ G ++YR+D
Sbjct: 13 MVKIYPHLAFPVDMDVVQDKILPYLTTEQERFTIWMKSLVFNSKGCTVFDSKGNLIYRVD 72
Query: 49 NYDNKG-SNEVYLMDLRGNVLFTILRRVRVFGRLWRGYKGDNDGSNLNK--------EKP 99
NYD+K SNEVY MDL G +LFT+ ++ F + W GY L K
Sbjct: 73 NYDSKSWSNEVYFMDLNGKILFTLRQKKLGFFKSWEGYNSTGTRFRLRKIFKILPRESSS 132
Query: 100 SFEVTKKGEITLLSNNEASCYKLKLEAASATGRTKSAALFKIIDCRRGVVVAEGMRKQSR 159
S++V I + ++ SCYK+ ++F I D G ++AE K S
Sbjct: 133 SYKVVMGSRI--VDGDQQSCYKI----------VNRGSVFAIKDG-SGRLMAEVKNKLS- 178
Query: 160 SGSGVLLGDDVLTLSVEPHVDRSFIMALVTVYGL 193
SG+ LGDDVLT+ VEP +D S IM +V Y L
Sbjct: 179 DISGLDLGDDVLTMMVEPQLDHSLIMGIVIAYKL 212
>sp|Q9ZVI6|LOR8_ARATH Protein LURP-one-related 8 OS=Arabidopsis thaliana GN=At2g38640
PE=2 SV=1
Length = 196
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 99/206 (48%), Gaps = 22/206 (10%)
Query: 1 MAKVRP-LPISVEAA---SKRES-FTVWMKSLVMQGNGCTVFNENGEIVYRIDNYDNKGS 55
M KV P P + E + SK TVW KSL+ +G TV+N NGE+V+R+DNY N
Sbjct: 1 MTKVHPKFPSTCEESLCDSKAAVVLTVWKKSLLFNCDGFTVYNANGELVFRVDNYMNCPR 60
Query: 56 NEVYLMDLRGNVLFTILRRVRVFGRLWRGYKGDNDGSNLNKEKPSFEVTKKGEITLLSNN 115
+ + LMD G L +I R+ G W Y G+ + P F T + ++++SN
Sbjct: 61 DNIVLMDASGFPLLSIRRKKLSLGDCWMVYDGETE------RDPIF--TARKNVSIISNR 112
Query: 116 EA----SCYKLKLEAASATGRTKSAALFKIIDCRRG-VVVAEGMRKQSRSGSGVLLGDDV 170
++ S K L + +S KI+D RR AE RK++ G GV G DV
Sbjct: 113 KSLAWVSAKKTVLYEIEGSYGQRSC---KILDERRNKKKTAEIKRKETVIG-GVAFGKDV 168
Query: 171 LTLSVEPHVDRSFIMALVTVYGLMNR 196
L VE ++ MAL + M R
Sbjct: 169 YKLIVESEMEPRVAMALTIILDQMFR 194
>sp|Q9LVZ8|LOR12_ARATH Protein LURP-one-related 12 OS=Arabidopsis thaliana GN=At3g15810
PE=2 SV=1
Length = 220
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 18 ESFTVWMKSLVMQGNGCTVFNENGEIVYRIDNY--DNKGSNEVYLMDLRGNVLFTILRRV 75
+ TV SL G+G ++ G+I++R+D+Y D + ++E+ LMD G L T+ R+
Sbjct: 31 KPLTVCKTSLFYTGDGFAAYDCRGDIIFRVDSYGPDTRDNDEIVLMDATGKCLLTVKRKR 90
Query: 76 RVFGRLWRGYKGDNDGSNLNKEKPSFEVTKKGEITLLSNNEASCYKLKLEAASATG--RT 133
+ W G+ G+ +KP F V ++ I E Y E G
Sbjct: 91 PTLHQRWEGFLGERS----EGQKPIFSV-RRSSIIGRCTMEVEVYDGTGEEYIIDGDFSQ 145
Query: 134 KSAALFKIIDCRRGVVVAEGMRKQSRSGSGVLLGDDVLTLSVEPHVDRSFIMALVTVYGL 193
+S ++ C VAE RK S + V+LG DV TL ++P D +F M LV V
Sbjct: 146 RSCLIYDTKKC----TVAEIKRKVDAS-TNVMLGRDVFTLEIKPGFDGAFAMGLVVVLDQ 200
Query: 194 MN 195
+N
Sbjct: 201 IN 202
>sp|Q9SSC7|LOR5_ARATH Protein LURP-one-related 5 OS=Arabidopsis thaliana GN=At1g80120
PE=1 SV=1
Length = 210
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 94/184 (51%), Gaps = 21/184 (11%)
Query: 16 KRESFTVWMKSLVMQGNGCTVFNENGEIVYRIDNY---DNKGSNEVYLMDLRGNVLFTIL 72
+ S TV SL G+G TV++ G +V+R+D+Y + + ++EV LMD G L T+
Sbjct: 15 EERSLTVRKTSLFFAGDGFTVYDCKGSLVFRVDSYGGPNTRDTDEVVLMDAHGRCLLTLR 74
Query: 73 RRVRVFGRLWRGYKGD-NDGSNLNKEKPSFEVTK-----KGEITLLSNNEASCYKLKLEA 126
R+ R W GY G+ +DG +KP F V + + +T+ + C + +E
Sbjct: 75 RKRPSLRRRWEGYLGERSDG-----QKPIFGVRRSSIIGRNSVTVEVYGDYQCSEYLIEG 129
Query: 127 ASATGRTKSAALFKIIDCRRGVVVAEGMRKQSRSGSGVLLGDDVLTLSVEPHVDRSFIMA 186
+ A +++ VAE +R++ + + V+LG DV +L+V+P D +F M
Sbjct: 130 SFG------ARNCTVVEAETRRKVAE-IRRKVDASTNVMLGKDVFSLNVKPGFDGAFAMG 182
Query: 187 LVTV 190
LV V
Sbjct: 183 LVLV 186
>sp|A0MFL4|LOR17_ARATH Protein LURP-one-related 17 OS=Arabidopsis thaliana GN=At5g41590
PE=2 SV=2
Length = 221
Score = 70.9 bits (172), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 86/186 (46%), Gaps = 14/186 (7%)
Query: 19 SFTVWMKSLVMQGNGCTVFNENGEIVYRIDNYDNKGSNEVYLMDLRGNVLFTILRRVRV- 77
+ TVW KSL++ G TV + NG+++YR+DNY E+ LMD GN L + R ++
Sbjct: 38 TLTVWRKSLLVSCEGFTVIDSNGDLIYRVDNYARTRPEELILMDKDGNSLLLMHRTKKIT 97
Query: 78 FGRLWRGYKG-DNDGSNLNKEKPSFEVTKKGEITLLSNNE---ASCYKLKLEAASA---- 129
W Y+ D G + P++ + K ++ +LS A Y + ++
Sbjct: 98 LVDSWGIYEANDTKGETKIPKCPTWYMRKNLKMNILSTKSDILAYVYSGSFDKKNSYIIK 157
Query: 130 -TGRTKSAALFKIIDCRRGVVVAEGMRKQSRSGSGVLLGDDVLTLSVEPHVDRSFIMALV 188
+ R KS KI+ V E RK+ R+ GV G DV L V P D MALV
Sbjct: 158 GSYRCKSC---KIVHVPLNKTVVEIKRKEVRT-KGVRFGSDVFDLVVNPGFDTGLAMALV 213
Query: 189 TVYGLM 194
+ M
Sbjct: 214 LLLDQM 219
>sp|Q9ZUF7|LOR6_ARATH Protein LURP-one-related 6 OS=Arabidopsis thaliana GN=At2g05910
PE=2 SV=1
Length = 191
Score = 38.5 bits (88), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 76/192 (39%), Gaps = 35/192 (18%)
Query: 13 AASKRESFTVWMKSLVMQGNGCTVFNENGEIVYRIDNYDNKGSN-EVYLMDLRGNVLFTI 71
+S E V + V+ G G V + +IV++ID G+ E+ L D GN L I
Sbjct: 10 CSSMEEVMVVRRRPHVVNGGGFVVTDYKEKIVFKIDGCGVLGTKGELVLRDSDGNDLLLI 69
Query: 72 LRRVRVFGRL-----WRGYKGDNDGSNLNKEKPSFEVTKKGEITLLSNNEASCY----KL 122
++ V L W+GY D GS KP F L + + SC+ +
Sbjct: 70 HKKGGVVQALSIHNKWKGYSYDYQGS----PKPVFT---------LRDPKHSCFSITSSI 116
Query: 123 KLEAASATGRTKSAALFKIIDC----RRGVVVAEGMRKQSRSGSGVLLGDDVLTLSVEPH 178
++ F DC +G V+A Q + G D+ + +P
Sbjct: 117 RISVGPGNCYFDVKGYFPDRDCSIVDSKGNVIA-----QVKEWIG---SRDIYKVVTKPS 168
Query: 179 VDRSFIMALVTV 190
VD++F+ ++ V
Sbjct: 169 VDKAFVFGVIAV 180
>sp|Q9LZX1|LOR15_ARATH Protein LURP-one-related 15 OS=Arabidopsis thaliana GN=At5g01750
PE=1 SV=1
Length = 217
Score = 33.9 bits (76), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 87/200 (43%), Gaps = 31/200 (15%)
Query: 6 PLPISVEAASKRESFTVWMKSLVMQGNGCTVFNENGEIVYRIDNYDNKGSNEVYLMDLRG 65
P PI + K S T GN + + NG +++++ ++ L+D G
Sbjct: 35 PYPIDMAIVRKMMSLT--------DGN-FVITDVNGNLLFKVKEPVFGLHDKRVLLDGSG 85
Query: 66 NVLFTILRRVRVFGRLWRGYKG-DNDGSNL---NKEKPSFEVTKKGEITLLSN-NEASC- 119
+ T+ ++ W+ ++G D +L K ++ K ++ L N +E C
Sbjct: 86 TPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLGHNKDEKRCD 145
Query: 120 YKLK---LEAASATGRTKSAALFKIIDCRRGVVVAEGMRKQSRSGSGVLLGDDVLTLSVE 176
+++K LE + +S A +VA+ RK + V LG D +++V
Sbjct: 146 FRVKGSWLERSCVVYAGESDA-----------IVAQMHRKHTVQS--VFLGKDNFSVTVY 192
Query: 177 PHVDRSFIMALVTVYGLMNR 196
P+VD +FI +LV + +NR
Sbjct: 193 PNVDYAFIASLVVILDDVNR 212
>sp|Q972D2|NADB_SULTO L-aspartate oxidase OS=Sulfolobus tokodaii (strain DSM 16993 / JCM
10545 / NBRC 100140 / 7) GN=nadB PE=1 SV=1
Length = 472
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Query: 22 VWMKSLVMQGNGCTVFNENGEIVYRIDNYDNKG--------SNEVYLMDLRGNVLFTILR 73
V++ + ++G G + NENGE + NYD +G S +Y+ L+G+ +F L
Sbjct: 222 VFLLTETLRGEGAQIINENGERF--LFNYDKRGELAPRDILSRAIYIEMLKGHKVFIDLS 279
Query: 74 RVRVFGR 80
++ F R
Sbjct: 280 KIEDFER 286
>sp|Q9SF24|LOR10_ARATH Protein LURP-one-related 10 OS=Arabidopsis thaliana GN=At3g11740
PE=2 SV=2
Length = 194
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 77/177 (43%), Gaps = 13/177 (7%)
Query: 25 KSLVMQGNGCTVFNENGEIVYRIDNYDNKGSNEVYLMDLRGNVLFTILRRVRVFGRLWRG 84
K + + V + NG +++++ S++ L+D + T+ W
Sbjct: 21 KVMTLTDGNFAVTDVNGNLLFKVKEPLFSISDKRILLDAYDTPILTLRENKVSLHDRWLV 80
Query: 85 YKG-DNDGSNLN---KEKPSFEVTK-KGEITLLSNNEASCYKLKLEAASATGRTKSAALF 139
Y+G D S+L K ++ K K +I L N E ++ + +S ++
Sbjct: 81 YRGKSTDQSDLLYTLKRSSMIQIMKPKLDIFLAHNKEMKICDFHVKGSWID---RSCVVY 137
Query: 140 KIIDCRRGVVVAEGMRKQSRSGSGVLLGDDVLTLSVEPHVDRSFIMALVTVYGLMNR 196
+ +VA+ +K + +L+G +++V P+VD +FI++L+ + +NR
Sbjct: 138 A---GKSDAIVAQMHKKHT--AQSILIGKSNFSVTVYPNVDFAFIVSLIVILDDINR 189
>sp|Q9LQ36|LOR1_ARATH Protein LURP-one-related 1 OS=Arabidopsis thaliana GN=At1g33840
PE=2 SV=2
Length = 224
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 72/170 (42%), Gaps = 12/170 (7%)
Query: 25 KSLVMQGNGCTVFNENGEIVYRIDNYDNKGSNEVYLMDLRGNVLFTILRRVRVFGRLWRG 84
K L + + N G +++++ + + LMD G + T+ ++ W
Sbjct: 45 KVLKITDGNFVITNAEGNLLFKVKDPFFSLHEKRILMDGFGTKVLTLKGKIMTMHDRWLV 104
Query: 85 YKG----DNDGSNLNKEKPSFEVTKKGEITLLSNNEASCYKLKLEAASATGRTKSAALFK 140
++G + D K ++T K ++ L N E +LE G + F
Sbjct: 105 FRGGSTEEVDLLYTVKRSNMVQITTKLDVFLADNIEQKKCDYRLE-----GVWLETSCF- 158
Query: 141 IIDCRRGVVVAEGMRKQSRSGSGVLLGDDVLTLSVEPHVDRSFIMALVTV 190
+ +++A+ ++ ++ VL G D L+V P+VD +FI +L+ +
Sbjct: 159 VYAGDSDIILAQ--MREKKTMQSVLFGKDNFCLTVNPNVDYAFIASLIVI 206
>sp|Q2RL78|ADDB_MOOTA ATP-dependent helicase/deoxyribonuclease subunit B OS=Moorella
thermoacetica (strain ATCC 39073) GN=addB PE=3 SV=1
Length = 1151
Score = 32.3 bits (72), Expect = 2.2, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 79 GRLWRGYKGDNDGSNLNKEKPSFEVTKKGEITLLSNNEASCYKLKLEAA----SATGRTK 134
GR WR + G++ + E PS + GE ASC+ + + A TGR
Sbjct: 434 GRRWRDSRPWQYGNSRDLETPSPPGSAAGETINAIRERASCHLRRFDGALRGRQLTGREI 493
Query: 135 SAALFKII 142
+AALF ++
Sbjct: 494 TAALFDLL 501
>sp|B3H5L1|LOR9_ARATH Protein LURP-one-related 9 OS=Arabidopsis thaliana GN=At3g10986
PE=3 SV=1
Length = 197
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 5/112 (4%)
Query: 82 WRGYKGDNDGSN---LNKEKPSFEVTKKGEITLLSNNEASCYKLKLEAASATGRTKSAAL 138
W YKGD+ S+ + +P+ K L +++S +E T +
Sbjct: 80 WEVYKGDSTESDNLLFSAREPNLLSFKTSLDVTLPPDQSSTDISSVEPDFQTFGRYIGSS 139
Query: 139 FKIIDCRRGVVVAEGMRKQSRSGSGVLLGDDVLTLSVEPHVDRSFIMALVTV 190
FK+ + ++AE + + G++ G + V P+VD +F++AL+ +
Sbjct: 140 FKLFEPIHNTLLAEVV--HDFTWGGLIKGSYSFKVRVNPYVDFAFVVALLVI 189
>sp|A0Q0Y1|RIMM_CLONN Ribosome maturation factor RimM OS=Clostridium novyi (strain NT)
GN=rimM PE=3 SV=1
Length = 162
Score = 31.2 bits (69), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 33 GCTVFNENGEIVYRIDNYDNKGSNEVYLMDLRGNVLFTILRRVRV 77
GCTV++EN + + ID + GSN+VY + +L ++ V V
Sbjct: 100 GCTVYDENEKQLGNIDEIIHTGSNDVYWIKGPNELLIPAIKSVIV 144
>sp|Q9LSQ1|LOR13_ARATH Protein LURP-one-related 13 OS=Arabidopsis thaliana GN=At3g16900
PE=3 SV=1
Length = 185
Score = 30.8 bits (68), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 78/177 (44%), Gaps = 26/177 (14%)
Query: 25 KSLVMQGNGCTVFNENGEIVYRIDNYDNKGSNEVYLMDLRGNVLFTILRRVRVFGRLWRG 84
+ L + G TV + G V+++ N+ L+D + + T+ +V W+
Sbjct: 24 QPLDLTITGDTVKDATGNKVFKVKTPLFGLHNKRILVDPNDSPIVTMKMKVTSKHDRWQV 83
Query: 85 YKGDN--DGSNLNKEKPSFEVTKKGEITLLSNN--EASC-YKLKLEAASATGR-TKSAAL 138
Y+G + D K + ++ + E+ L N E+SC + +K GR K A
Sbjct: 84 YRGSDLDDKIFTVKRSSTVQLKTRVEVFLKHNQTRESSCDFTIK-------GRFMKRACT 136
Query: 139 FKIIDCRRGVVVAEGMRKQSRSGSGVLLGDDVLTLSVEPHVDRSFIMALVTVYGLMN 195
+ D + ++A+ V G + L ++ P+VD +FI+ L+ ++ L+N
Sbjct: 137 IYVADSTK--IIAQ-----------VYEGHERLVATIYPNVDYAFIVTLIFIFDLIN 180
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,385,406
Number of Sequences: 539616
Number of extensions: 2772860
Number of successful extensions: 6085
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 6060
Number of HSP's gapped (non-prelim): 22
length of query: 198
length of database: 191,569,459
effective HSP length: 111
effective length of query: 87
effective length of database: 131,672,083
effective search space: 11455471221
effective search space used: 11455471221
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)