Query 040755
Match_columns 275
No_of_seqs 183 out of 1399
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 11:28:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040755.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040755hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00184 aquaporin NIP1; Provi 100.0 1E-52 2.2E-57 377.9 23.8 237 37-273 49-293 (296)
2 KOG0223 Aquaporin (major intri 100.0 2.6E-50 5.7E-55 350.4 21.6 219 36-255 5-228 (238)
3 PLN00182 putative aquaporin NI 100.0 4.1E-49 8.9E-54 352.6 25.2 227 38-264 38-265 (283)
4 PLN00026 aquaporin NIP; Provi 100.0 1.1E-48 2.3E-53 351.3 22.1 229 37-266 66-295 (298)
5 KOG0224 Aquaporin (major intri 100.0 1.5E-48 3.3E-53 342.0 15.8 225 34-259 24-281 (316)
6 COG0580 GlpF Glycerol uptake f 100.0 6.1E-46 1.3E-50 322.2 20.8 214 40-253 3-240 (241)
7 PTZ00016 aquaglyceroporin; Pro 100.0 2.9E-45 6.3E-50 330.4 24.4 217 39-255 47-292 (294)
8 PRK05420 aquaporin Z; Provisio 100.0 6.6E-45 1.4E-49 318.3 23.3 212 42-254 2-229 (231)
9 PLN00027 aquaporin TIP; Provis 100.0 4.4E-45 9.6E-50 323.3 22.2 217 39-255 17-241 (252)
10 PLN00166 aquaporin TIP2; Provi 100.0 6.3E-45 1.4E-49 321.4 22.8 215 39-253 15-237 (250)
11 PLN00167 aquaporin TIP5; Provi 100.0 1.3E-44 2.9E-49 320.2 24.7 218 38-255 18-242 (256)
12 PF00230 MIP: Major intrinsic 100.0 3.3E-45 7.1E-50 320.2 17.2 213 36-248 2-227 (227)
13 PLN00183 putative aquaporin NI 100.0 6.1E-44 1.3E-48 318.2 22.5 221 36-257 39-260 (274)
14 cd00333 MIP Major intrinsic pr 100.0 2.5E-41 5.4E-46 296.0 19.4 209 43-251 1-228 (228)
15 TIGR00861 MIP MIP family chann 100.0 5.5E-39 1.2E-43 279.0 18.3 202 47-248 1-216 (216)
16 PLN00182 putative aquaporin NI 99.6 6.6E-15 1.4E-19 132.2 11.0 98 40-142 157-254 (283)
17 PLN00184 aquaporin NIP1; Provi 99.6 2.6E-15 5.6E-20 135.7 7.3 99 156-254 52-156 (296)
18 PLN00026 aquaporin NIP; Provi 99.6 2.8E-15 6.2E-20 135.2 7.4 99 156-254 69-173 (298)
19 PLN00183 putative aquaporin NI 99.6 1E-14 2.2E-19 130.5 10.7 111 41-156 160-270 (274)
20 cd00333 MIP Major intrinsic pr 99.6 1.3E-14 2.8E-19 127.1 10.5 102 36-139 124-227 (228)
21 KOG0223 Aquaporin (major intri 99.5 5.8E-14 1.3E-18 122.7 7.4 100 39-144 129-228 (238)
22 TIGR00861 MIP MIP family chann 99.5 1.8E-13 4E-18 118.9 10.2 96 39-136 119-215 (216)
23 PLN00166 aquaporin TIP2; Provi 99.5 4.9E-14 1.1E-18 124.8 6.5 98 156-253 16-124 (250)
24 PLN00167 aquaporin TIP5; Provi 99.5 8.3E-14 1.8E-18 123.7 7.8 99 156-254 20-129 (256)
25 PRK05420 aquaporin Z; Provisio 99.4 2.9E-13 6.2E-18 118.7 7.5 97 158-254 2-105 (231)
26 PTZ00016 aquaglyceroporin; Pro 99.4 1.8E-13 3.9E-18 123.9 6.3 99 156-254 48-152 (294)
27 PLN00027 aquaporin TIP; Provis 99.4 3.3E-13 7.1E-18 119.8 7.7 98 156-253 18-126 (252)
28 KOG0224 Aquaporin (major intri 99.4 5.7E-13 1.2E-17 118.0 5.0 99 156-254 30-135 (316)
29 COG0580 GlpF Glycerol uptake f 99.3 2.6E-12 5.6E-17 112.2 6.4 104 157-260 4-116 (241)
30 PF00230 MIP: Major intrinsic 99.1 2.2E-10 4.7E-15 100.1 9.4 97 38-137 131-227 (227)
31 COG2116 FocA Formate/nitrite f 94.9 0.64 1.4E-05 41.6 12.3 178 74-257 64-262 (265)
32 PRK11562 nitrite transporter N 92.4 1 2.2E-05 40.5 9.2 99 78-178 62-171 (268)
33 PRK09713 focB putative formate 82.6 20 0.00043 32.5 10.9 98 78-178 71-181 (282)
34 PRK10805 formate transporter; 80.5 45 0.00097 30.3 13.8 96 78-177 72-181 (285)
35 TIGR00790 fnt formate/nitrite 79.4 24 0.00052 31.0 10.2 77 101-177 68-157 (239)
36 PF01226 Form_Nir_trans: Forma 76.4 30 0.00064 30.7 9.9 101 76-178 59-171 (250)
37 PF04632 FUSC: Fusaric acid re 60.1 1.9E+02 0.0041 28.9 13.5 113 111-255 381-493 (650)
38 PF03033 Glyco_transf_28: Glyc 41.3 10 0.00022 29.4 0.4 21 93-113 5-25 (139)
39 PRK12446 undecaprenyldiphospho 37.6 8.9 0.00019 35.6 -0.6 22 91-112 6-27 (352)
40 KOG1330 Sugar transporter/spin 30.7 60 0.0013 31.7 3.7 29 228-256 186-214 (493)
41 PRK10631 p-hydroxybenzoic acid 22.3 8.5E+02 0.018 24.9 13.1 46 97-142 380-425 (652)
42 PF08089 Toxin_20: Huwentoxin- 20.9 54 0.0012 20.1 1.0 18 8-25 9-26 (39)
No 1
>PLN00184 aquaporin NIP1; Provisional
Probab=100.00 E-value=1e-52 Score=377.94 Aligned_cols=237 Identities=62% Similarity=1.074 Sum_probs=208.8
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhhhhcccccC-CCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCC
Q 040755 37 PVLQLLQKAIAEVIGTYFLIFTGCGSVAVNKIYG-SVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFP 115 (275)
Q Consensus 37 ~~~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~-~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~ 115 (275)
.+.+++|++++||+|||+|+++++++...+...+ ...+..++++||+++++.+++++++||||+|||||+++++.|+++
T Consensus 49 ~~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~~ 128 (296)
T PLN00184 49 VSVPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFP 128 (296)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCCC
Confidence 4567899999999999999999998876543322 345677899999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhcCCc-------ccccccCCCCchhHHHHHHHHHHHHHHHhhhhcccCCCCCch
Q 040755 116 RKQVPIYIVAQLLGSVLASGSLYLIFDVKDE-------AFFGTIPVGTNVQSFVLEIIISFLLMFVISGVATDNRSIGEL 188 (275)
Q Consensus 116 ~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~-------~~~~~~p~~s~~~~~~~E~~~T~ilv~~i~~~~~~~~~~~~~ 188 (275)
|.++++|+++|++|+++|+++++.+++.... ...++.|..+..++|+.|+++|++|+++++.+..+++..+..
T Consensus 129 ~~~~~~YiiaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~~~~~~~~ 208 (296)
T PLN00184 129 LKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNRAIGEL 208 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcchhhccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheeccCcCCCcc
Confidence 9999999999999999999999998853211 122345666889999999999999999999986666655567
Q ss_pred hHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHhccCceeeeeecchHHHHHHHHHHHHHhcCCCCccccccCcccc
Q 040755 189 AGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMHQYKGLWVYIAGPIIGTILGGLAYNMIRFTDKPLREITKSGSFL 268 (275)
Q Consensus 189 ~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~~a~~l~~~~~~~~~~~~~~~~~~~~~ 268 (275)
.++.||+++.+.+++.+++||++|||||||||+++.+.|+++||||++|++|+++|+++|+++...+++.++..+++++.
T Consensus 209 ~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~~~~~~WVy~vgPilGa~laal~y~~l~~~~~~~~~~~~~~~~~ 288 (296)
T PLN00184 209 AGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYGCYKGIWIYIVAPTLGAIAGAWVYNTVRYTDKPLREITKSGSFL 288 (296)
T ss_pred hHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhhcccccchHHhHHHHHHHHHHHHHHHHhcCCCcchhhccchHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999899999999999988
Q ss_pred ccCCC
Q 040755 269 KSFSR 273 (275)
Q Consensus 269 ~~~~~ 273 (275)
|+.+.
T Consensus 289 ~~~~~ 293 (296)
T PLN00184 289 KTVRI 293 (296)
T ss_pred hhhcc
Confidence 87764
No 2
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-50 Score=350.42 Aligned_cols=219 Identities=44% Similarity=0.758 Sum_probs=199.3
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHhhhhhcccc-cCCCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCC
Q 040755 36 SPVLQLLQKAIAEVIGTYFLIFTGCGSVAVNKI-YGSVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHF 114 (275)
Q Consensus 36 ~~~~~~~~~~~~EfigTf~lv~~~~~~~~~~~~-~~~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~ 114 (275)
..+.+.+|++++||++|++++|++|++...+.. ....+.+.+++++|+++++.++++|++||||+|||||+++++.|++
T Consensus 5 ~~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~~~~i 84 (238)
T KOG0223|consen 5 LLSVSFLRALIAEFLATFLFVFAGCGSVVVNPKYGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAVGGKI 84 (238)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHHhCCC
Confidence 445779999999999999999999999887764 3366688899999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHhhcC----CcccccccCCCCchhHHHHHHHHHHHHHHHhhhhcccCCCCCchhH
Q 040755 115 PRKQVPIYIVAQLLGSVLASGSLYLIFDVK----DEAFFGTIPVGTNVQSFVLEIIISFLLMFVISGVATDNRSIGELAG 190 (275)
Q Consensus 115 ~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~----~~~~~~~~p~~s~~~~~~~E~~~T~ilv~~i~~~~~~~~~~~~~~~ 190 (275)
++.++..|+++|++|+++|+++++.+.+.+ ........+..+..|+++.|++.||+|+++++...+|+|+. .+.+
T Consensus 85 sl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~-~~a~ 163 (238)
T KOG0223|consen 85 SLFRAVAYIVAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRRS-ELAP 163 (238)
T ss_pred cHHHhHHHHHHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCCc-ccHH
Confidence 999999999999999999999999998764 11223345666899999999999999999999977888776 8899
Q ss_pred HHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHhccCceeeeeecchHHHHHHHHHHHHHhcCC
Q 040755 191 IAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMHQYKGLWVYIAGPIIGTILGGLAYNMIRFTD 255 (275)
Q Consensus 191 ~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~~a~~l~~~~~~~~ 255 (275)
+.||+++.+.+++.+++||++|||||+|||+++.+.|+++||||++|++|+++|+++|++++.++
T Consensus 164 l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 164 LAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYGSWDDHWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred HHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhcCCCcEEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 99999999999999999999999999999999999999999999999999999999999998766
No 3
>PLN00182 putative aquaporin NIP4; Provisional
Probab=100.00 E-value=4.1e-49 Score=352.57 Aligned_cols=227 Identities=74% Similarity=1.235 Sum_probs=196.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhhhhhccccc-CCCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCCC
Q 040755 38 VLQLLQKAIAEVIGTYFLIFTGCGSVAVNKIY-GSVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFPR 116 (275)
Q Consensus 38 ~~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~-~~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~~ 116 (275)
..+++|++++||+|||+|+|+++++...+... +..+...++++||+++++.+++++++||||+|||||+++++.|+++|
T Consensus 38 ~~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~~~~ 117 (283)
T PLN00182 38 IVCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPW 117 (283)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcCCCH
Confidence 35688999999999999999999876643322 12345667889999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHhhcCCcccccccCCCCchhHHHHHHHHHHHHHHHhhhhcccCCCCCchhHHHHHHH
Q 040755 117 KQVPIYIVAQLLGSVLASGSLYLIFDVKDEAFFGTIPVGTNVQSFVLEIIISFLLMFVISGVATDNRSIGELAGIAIGMT 196 (275)
Q Consensus 117 ~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~p~~s~~~~~~~E~~~T~ilv~~i~~~~~~~~~~~~~~~~~ig~~ 196 (275)
.+++.|+++|++|+++|+++++.+++.......++.|..+..++++.|+++|++|+++++.+..+++..+...++.+|++
T Consensus 118 ~~~~~Yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~~~~~~~l~iGl~ 197 (283)
T PLN00182 118 YQVPLYIGAQLTGSLLASLTLRLMFNVTPEAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSRAVGELAGIAVGMT 197 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccceeeCCCCcchHHHHHHHHHHHHHHHHHHHhheeccccCCcchhHHHHHH
Confidence 99999999999999999999999886544455667787788999999999999999999987656554455679999999
Q ss_pred HHHHHHHhcCCCCcccchhhhHHHHHhHhccCceeeeeecchHHHHHHHHHHHHHhcCCCCccccccC
Q 040755 197 ILLNVLVAGPVSGASMNPARSLGPAIVMHQYKGLWVYIAGPIIGTILGGLAYNMIRFTDKPLREITKS 264 (275)
Q Consensus 197 v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~~a~~l~~~~~~~~~~~~~~~~~ 264 (275)
+.+.+++.+++||+++||||+|+++++.+.|+++|+||++|++|+++|+++|+++...+.+..+..++
T Consensus 198 V~~~~~~~g~~SGa~lNPARt~gpal~~~~~~~~wvY~vap~lGA~lgally~~l~~~~~~~~~~~~~ 265 (283)
T PLN00182 198 IILNVFVAGPISGASMNPARSLGPAIVMGRYKGIWVYIVGPFVGIIAGGFVYNLIRFTDKPLRELTKS 265 (283)
T ss_pred HHHHHHHccccCccccChHHHHHHHHHhccccceeHHHHHHHHHHHHHHHHHHHHhccCCcccccccc
Confidence 99999999999999999999999999999999999999999999999999999997554444444433
No 4
>PLN00026 aquaporin NIP; Provisional
Probab=100.00 E-value=1.1e-48 Score=351.30 Aligned_cols=229 Identities=44% Similarity=0.729 Sum_probs=195.0
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhhhhcccccC-CCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCC
Q 040755 37 PVLQLLQKAIAEVIGTYFLIFTGCGSVAVNKIYG-SVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFP 115 (275)
Q Consensus 37 ~~~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~-~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~ 115 (275)
...+++|++++||+|||+|+|++++....+...+ ..++..+++++|+++++.+++++++||||+|||||+++++.|+++
T Consensus 66 ~~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~~~ 145 (298)
T PLN00026 66 PDVSLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFP 145 (298)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCCCc
Confidence 3456889999999999999999987655433222 335667789999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhcCCcccccccCCCCchhHHHHHHHHHHHHHHHhhhhcccCCCCCchhHHHHHH
Q 040755 116 RKQVPIYIVAQLLGSVLASGSLYLIFDVKDEAFFGTIPVGTNVQSFVLEIIISFLLMFVISGVATDNRSIGELAGIAIGM 195 (275)
Q Consensus 116 ~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~p~~s~~~~~~~E~~~T~ilv~~i~~~~~~~~~~~~~~~~~ig~ 195 (275)
|.++++||++|++|+++|+++++.++++... ...+.|..+..++++.|+++|++|+++++.+..|+++.+...++.||+
T Consensus 146 ~~~~~~YiiaQilGAi~aa~~~~~~~~~~~~-~g~t~p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~~~~~~~~l~iGl 224 (298)
T PLN00026 146 WKHVPAYIAAQVSASICASFALKGVFHPFMS-GGVTVPSVSTGQAFALEFIITFNLLFVVTAVATDTRAVGELAGIAVGA 224 (298)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccc-CceeeecccHHHHHHHHHHHHHHHHHhheeeecCCCCcCCccchHHHH
Confidence 9999999999999999999999998854211 112567778899999999999999999998766666555568899999
Q ss_pred HHHHHHHHhcCCCCcccchhhhHHHHHhHhccCceeeeeecchHHHHHHHHHHHHHhcCCCCccccccCcc
Q 040755 196 TILLNVLVAGPVSGASMNPARSLGPAIVMHQYKGLWVYIAGPIIGTILGGLAYNMIRFTDKPLREITKSGS 266 (275)
Q Consensus 196 ~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~~a~~l~~~~~~~~~~~~~~~~~~~ 266 (275)
++.+.+++.+++||+++||||+|+++++.++|+++|+||++|++|+++|+++|+.++.++++.....+.++
T Consensus 225 ~V~~~~l~~g~~TGa~mNPARtlgPal~~~~~~~~wVy~vaPilGAilga~ly~~~~~~~~~~~~~~~~~~ 295 (298)
T PLN00026 225 TVMLNILVAGPSTGGSMNPVRTLGPAVAAGNYRAIWIYLVAPTLGALAGAGTYTAVKLREEDGDPPRPVRS 295 (298)
T ss_pred HHHHHHHHhcccCccccChHHHHHHHHhcCCchheeHHHHHHHHHHHHHHHHHHHHhCccccccChhhhhh
Confidence 99999999999999999999999999999999999999999999999999999998766554444333333
No 5
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-48 Score=341.95 Aligned_cols=225 Identities=32% Similarity=0.586 Sum_probs=195.2
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhcccccC--CCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHh
Q 040755 34 SPSPVLQLLQKAIAEVIGTYFLIFTGCGSVAVNKIYG--SVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIF 111 (275)
Q Consensus 34 ~~~~~~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~--~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~ 111 (275)
+....+++.|++++||+||++|++++++++++...++ ..++..+.++||+++++++++.+++||||+|||||+++++.
T Consensus 24 ~~~i~~~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~ 103 (316)
T KOG0224|consen 24 KLHIRNELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCIL 103 (316)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHh
Confidence 3344577999999999999999999999987655543 66788899999999999999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcCC----------------cccccccCCC--CchhHHHHHHHHHHHHHH
Q 040755 112 RHFPRKQVPIYIVAQLLGSVLASGSLYLIFDVKD----------------EAFFGTIPVG--TNVQSFVLEIIISFLLMF 173 (275)
Q Consensus 112 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~----------------~~~~~~~p~~--s~~~~~~~E~~~T~ilv~ 173 (275)
|+++|++.++|+++|++||++|++.+|.++++.- ...+.+.|.. +++++|+.|+++|.+|+.
T Consensus 104 g~~p~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~~ 183 (316)
T KOG0224|consen 104 GRLPWKKFPVYVLAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAMLVL 183 (316)
T ss_pred cCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999886321 1233456654 889999999999999999
Q ss_pred HhhhhcccCCCC--CchhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHh-----------ccCceeeeeecchHH
Q 040755 174 VISGVATDNRSI--GELAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMH-----------QYKGLWVYIAGPIIG 240 (275)
Q Consensus 174 ~i~~~~~~~~~~--~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-----------~~~~~wvy~v~p~~G 240 (275)
.++++. |+|+. ..+.|+.+|+.+.+.....+.++|..+|||||||||++.. +.+++|++|++|++|
T Consensus 184 ~l~aI~-D~rN~~p~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlgPRlF~~~aGyG~~vF~~~~~~~WvPivgPl~G 262 (316)
T KOG0224|consen 184 CLFAIT-DKRNPIPTGLHPLVIGILVVAIGMSLGYNTGYAINPARDLGPRLFTSIAGYGPEVFSAGHNWWWVPIVGPLIG 262 (316)
T ss_pred heeEEe-cCCCCCCcchhHHHHHHHHHHHHHHhhcccCcccCcccccchHHHHHHHhcchhhcccCCceeeeeehhhhhh
Confidence 999984 55542 4578999999999999999999999999999999999942 126789999999999
Q ss_pred HHHHHHHHHHHhcCCCCcc
Q 040755 241 TILGGLAYNMIRFTDKPLR 259 (275)
Q Consensus 241 a~~a~~l~~~~~~~~~~~~ 259 (275)
+++++++|.+++..|.|++
T Consensus 263 ai~G~~iY~~~Ig~h~~~~ 281 (316)
T KOG0224|consen 263 AILGGWIYDFFIGFHIPRE 281 (316)
T ss_pred hhhhhhhheeeeeccCCCC
Confidence 9999999999988877643
No 6
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.1e-46 Score=322.25 Aligned_cols=214 Identities=40% Similarity=0.683 Sum_probs=186.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccccc---C-CCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCC
Q 040755 40 QLLQKAIAEVIGTYFLIFTGCGSVAVNKIY---G-SVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFP 115 (275)
Q Consensus 40 ~~~~~~~~EfigTf~lv~~~~~~~~~~~~~---~-~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~ 115 (275)
++.|++++||+||++|+++++++.+..... + ...+..++++||+++++.+++++++||+|+|||||++.++.|+++
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp 82 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFP 82 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCC
Confidence 467889999999999999999988654322 2 566778999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhcCC----------cccccccCCC-CchhHHHHHHHHHHHHHHHhhhhcccCCC
Q 040755 116 RKQVPIYIVAQLLGSVLASGSLYLIFDVKD----------EAFFGTIPVG-TNVQSFVLEIIISFLLMFVISGVATDNRS 184 (275)
Q Consensus 116 ~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~----------~~~~~~~p~~-s~~~~~~~E~~~T~ilv~~i~~~~~~~~~ 184 (275)
|++++.|+++|++|+++|+.+++.+++... ...+++.|.. +..++++.|+++|++|++.++.+.+|++.
T Consensus 83 ~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~~~~~~~fl~E~v~T~~L~~~Ila~~~~~~~ 162 (241)
T COG0580 83 WRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGGYSLGQAFLIEFVGTFVLVLGILALTDDGNA 162 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCcccHHHHHHHHHHHHHHHHHHHHHhhccCcc
Confidence 999999999999999999999999886421 1223356653 67899999999999999999998766665
Q ss_pred CCchhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHh---------ccCceeeeeecchHHHHHHHHHHHHHhc
Q 040755 185 IGELAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMH---------QYKGLWVYIAGPIIGTILGGLAYNMIRF 253 (275)
Q Consensus 185 ~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~---------~~~~~wvy~v~p~~Ga~~a~~l~~~~~~ 253 (275)
+....|+.||+.+...+++.++.||.++|||||||||+.+. +.+|+|+||++|++|+++|+++|+.++.
T Consensus 163 ~~~~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~~~~~~ 240 (241)
T COG0580 163 NAGFAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLYKLLLG 240 (241)
T ss_pred cccchHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHHHHHcc
Confidence 33589999999999999999999999999999999999653 2258999999999999999999997763
No 7
>PTZ00016 aquaglyceroporin; Provisional
Probab=100.00 E-value=2.9e-45 Score=330.39 Aligned_cols=217 Identities=31% Similarity=0.537 Sum_probs=183.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcccccC-CCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCCCC
Q 040755 39 LQLLQKAIAEVIGTYFLIFTGCGSVAVNKIYG-SVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFPRK 117 (275)
Q Consensus 39 ~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~-~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~~~ 117 (275)
++++|++++||+|||+++|+++++.......+ ..+...+++++|+++.+.+++++++||||+|||||+++++.|+++|.
T Consensus 47 ~~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~~~ 126 (294)
T PTZ00016 47 RPNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFPWK 126 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCCHH
Confidence 56889999999999999999998765432222 34466788999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhcCC-----------------cccccccCCCCchhHHHHHHHHHHHHHHHhhhhcc
Q 040755 118 QVPIYIVAQLLGSVLASGSLYLIFDVKD-----------------EAFFGTIPVGTNVQSFVLEIIISFLLMFVISGVAT 180 (275)
Q Consensus 118 ~~~~yi~aQ~lGa~~g~~l~~~~~~~~~-----------------~~~~~~~p~~s~~~~~~~E~~~T~ilv~~i~~~~~ 180 (275)
+++.|+++|++|+++|+++++.++++.. ...+.+.|..+..++++.|+++|++|+++++.+.+
T Consensus 127 ~~~~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~ila~~d 206 (294)
T PTZ00016 127 KLPGYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLVILAITD 206 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999875310 01223456567789999999999999999999754
Q ss_pred cCCCC-CchhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHh------ccC----ceeeeeecchHHHHHHHHHHH
Q 040755 181 DNRSI-GELAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMH------QYK----GLWVYIAGPIIGTILGGLAYN 249 (275)
Q Consensus 181 ~~~~~-~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~------~~~----~~wvy~v~p~~Ga~~a~~l~~ 249 (275)
+++.. ....|+.+|+++.+.+++.++.||+++|||||||||++.. .|+ ++||||++|++|+++|+++|+
T Consensus 207 ~~~~~~~~~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~vGa~~aally~ 286 (294)
T PTZ00016 207 PNNCPAFNYLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVGAVLGMFLYD 286 (294)
T ss_pred CccCCCcCcccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehHHHHHHHHHHHHHH
Confidence 43322 3467899999999999999999999999999999999962 343 689999999999999999999
Q ss_pred HHhcCC
Q 040755 250 MIRFTD 255 (275)
Q Consensus 250 ~~~~~~ 255 (275)
++..++
T Consensus 287 ~ll~~~ 292 (294)
T PTZ00016 287 KFIPPL 292 (294)
T ss_pred HHhCCC
Confidence 998654
No 8
>PRK05420 aquaporin Z; Provisional
Probab=100.00 E-value=6.6e-45 Score=318.34 Aligned_cols=212 Identities=38% Similarity=0.711 Sum_probs=180.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccc-cC-CCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCCCCch
Q 040755 42 LQKAIAEVIGTYFLIFTGCGSVAVNKI-YG-SVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFPRKQV 119 (275)
Q Consensus 42 ~~~~~~EfigTf~lv~~~~~~~~~~~~-~~-~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~~~~~ 119 (275)
+|++++||+||++|+++++++...... .+ ..+...+++++|+++.+.+++++++||+|+|||||+++++.|+++|.+.
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~~ 81 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKEL 81 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHHHh
Confidence 689999999999999999987654221 11 2345667899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCc-c-----c-----ccccCCC-CchhHHHHHHHHHHHHHHHhhhhcccCCCCCc
Q 040755 120 PIYIVAQLLGSVLASGSLYLIFDVKDE-A-----F-----FGTIPVG-TNVQSFVLEIIISFLLMFVISGVATDNRSIGE 187 (275)
Q Consensus 120 ~~yi~aQ~lGa~~g~~l~~~~~~~~~~-~-----~-----~~~~p~~-s~~~~~~~E~~~T~ilv~~i~~~~~~~~~~~~ 187 (275)
+.|+++|++|+++|+.+++.+++.... . . ..+.|.. +..++++.|+++|++|+++++... |+++...
T Consensus 82 ~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~~-~~~~~~~ 160 (231)
T PRK05420 82 VPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGAT-DKRAPAG 160 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHHh-CCCCCCc
Confidence 999999999999999999988754211 0 0 0113332 678999999999999999999875 4444455
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHhcc--CceeeeeecchHHHHHHHHHHHHHhcC
Q 040755 188 LAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMHQY--KGLWVYIAGPIIGTILGGLAYNMIRFT 254 (275)
Q Consensus 188 ~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~--~~~wvy~v~p~~Ga~~a~~l~~~~~~~ 254 (275)
..|+.+|+.+...+++.+++||++|||||+|||+++.++| +++|+||++|++|+++++++|++++..
T Consensus 161 ~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~ 229 (231)
T PRK05420 161 FAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWALEQLWLFWVAPIVGAIIGGLIYRLLLEK 229 (231)
T ss_pred chHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCCCCccceEEeehHHHHHHHHHHHHHHHHhcc
Confidence 7899999999999999999999999999999999998766 589999999999999999999998754
No 9
>PLN00027 aquaporin TIP; Provisional
Probab=100.00 E-value=4.4e-45 Score=323.29 Aligned_cols=217 Identities=35% Similarity=0.494 Sum_probs=187.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcc-c--ccC---CCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhc
Q 040755 39 LQLLQKAIAEVIGTYFLIFTGCGSVAVN-K--IYG---SVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFR 112 (275)
Q Consensus 39 ~~~~~~~~~EfigTf~lv~~~~~~~~~~-~--~~~---~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g 112 (275)
.+.+|++++||+|||+|+++++++.+.. . ..+ ..+++.+++++|+++.+.+++++++||+|+|||+|+++++.|
T Consensus 17 ~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~g 96 (252)
T PLN00027 17 PDALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGG 96 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHhC
Confidence 4578999999999999999999876421 1 111 234556899999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHhhcCCcccccccCCCCchhHHHHHHHHHHHHHHHhhhhcccCCCC--CchhH
Q 040755 113 HFPRKQVPIYIVAQLLGSVLASGSLYLIFDVKDEAFFGTIPVGTNVQSFVLEIIISFLLMFVISGVATDNRSI--GELAG 190 (275)
Q Consensus 113 ~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~p~~s~~~~~~~E~~~T~ilv~~i~~~~~~~~~~--~~~~~ 190 (275)
+++|.+++.|+++|++|+++|+++++.+.++......++.|..+..++++.|+++|++|+++++.+..|+++. +...+
T Consensus 97 ~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~~~~p 176 (252)
T PLN00027 97 NITLLRGILYWIAQLLGSVVACLLLKFSTGGLETSAFSLSSGVGVWNAFVFEIVMTFGLVYTVYATAVDPKKGDLGIIAP 176 (252)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCccHHHHHHHHHHHHHHHHHHHHHhccccccCCccchHH
Confidence 9999999999999999999999998887754333444556667889999999999999999999876555432 34789
Q ss_pred HHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHhccCceeeeeecchHHHHHHHHHHHHHhcCC
Q 040755 191 IAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMHQYKGLWVYIAGPIIGTILGGLAYNMIRFTD 255 (275)
Q Consensus 191 ~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~~a~~l~~~~~~~~ 255 (275)
+.+|+.+...+++.+++||+++||||+|||+++.++|+++|+||++|++|+++|+++|++++.++
T Consensus 177 ~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~~ 241 (252)
T PLN00027 177 IAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWAGPLIGGGIAGLVYELIFIGS 241 (252)
T ss_pred HHHHHHHHHHHHhcccccccccCcchhHHHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999997543
No 10
>PLN00166 aquaporin TIP2; Provisional
Probab=100.00 E-value=6.3e-45 Score=321.42 Aligned_cols=215 Identities=33% Similarity=0.556 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcc-c-c--cC--CCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhc
Q 040755 39 LQLLQKAIAEVIGTYFLIFTGCGSVAVN-K-I--YG--SVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFR 112 (275)
Q Consensus 39 ~~~~~~~~~EfigTf~lv~~~~~~~~~~-~-~--~~--~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g 112 (275)
.+.+|++++||+|||+|+++++++.... . . .. ...+..+++++|+.+++.+++++++||+|+|||+|+++++.|
T Consensus 15 ~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~g 94 (250)
T PLN00166 15 VASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIGG 94 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhC
Confidence 5678999999999999999999876531 1 1 11 234556889999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHhhcCCcccccccCCCCchhHHHHHHHHHHHHHHHhhhhcccCCCC--CchhH
Q 040755 113 HFPRKQVPIYIVAQLLGSVLASGSLYLIFDVKDEAFFGTIPVGTNVQSFVLEIIISFLLMFVISGVATDNRSI--GELAG 190 (275)
Q Consensus 113 ~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~p~~s~~~~~~~E~~~T~ilv~~i~~~~~~~~~~--~~~~~ 190 (275)
+++|.+.++|+++|++|+++|+.+++.++.+......+..+..+..++++.|+++|++|+++++.+..++++. +...|
T Consensus 95 ~~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~~~~~~~~p 174 (250)
T PLN00166 95 NITIITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAP 174 (250)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCCCcHHHHHHHHHHHHHHHHHHHHHhcccccccccccchh
Confidence 9999999999999999999999999888754322222334455788999999999999999999976655432 34689
Q ss_pred HHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHhccCceeeeeecchHHHHHHHHHHHHHhc
Q 040755 191 IAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMHQYKGLWVYIAGPIIGTILGGLAYNMIRF 253 (275)
Q Consensus 191 ~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~~a~~l~~~~~~ 253 (275)
+.+|+.+.+.++..+++||+++||||+||||++.++|+++|+||++|++|+++|+++|+.++.
T Consensus 175 ~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~~~~~~wvywvgPi~Ga~~aa~~y~~l~~ 237 (250)
T PLN00166 175 IAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIYGDVFI 237 (250)
T ss_pred HHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999988754
No 11
>PLN00167 aquaporin TIP5; Provisional
Probab=100.00 E-value=1.3e-44 Score=320.17 Aligned_cols=218 Identities=30% Similarity=0.475 Sum_probs=184.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhhhhhcccc--cC----CCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHh
Q 040755 38 VLQLLQKAIAEVIGTYFLIFTGCGSVAVNKI--YG----SVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIF 111 (275)
Q Consensus 38 ~~~~~~~~~~EfigTf~lv~~~~~~~~~~~~--~~----~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~ 111 (275)
..+++|++++||+|||+|+++++++...+.. .+ ..++..+++++|+++.+.+++++++||+|+|||+|++.++.
T Consensus 18 ~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~~ 97 (256)
T PLN00167 18 TRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVG 97 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHh
Confidence 4668899999999999999999988764321 11 23467789999999999999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcCCcccccccCCCCchhHHHHHHHHHHHHHHHhhhhcccCCC-CCchhH
Q 040755 112 RHFPRKQVPIYIVAQLLGSVLASGSLYLIFDVKDEAFFGTIPVGTNVQSFVLEIIISFLLMFVISGVATDNRS-IGELAG 190 (275)
Q Consensus 112 g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~p~~s~~~~~~~E~~~T~ilv~~i~~~~~~~~~-~~~~~~ 190 (275)
|+++|.+++.|+++|++|+++|+++++.++++.........+..+.+++++.|+++|++|+++++.+.++++. .+...|
T Consensus 98 g~~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~~~~~~~~~~~~~~p 177 (256)
T PLN00167 98 GHISVPTAMFYWISQMLASVMACLFLKVTTVGQHVPTYKIAEEMTGFGASVLEGVLTFGLVYTVYAAGDPRRGLLGAIGP 177 (256)
T ss_pred CCCcHhhhhHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHHHhccccccCCCCcch
Confidence 9999999999999999999999999888765321111111223466789999999999999999987543332 234679
Q ss_pred HHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHhccCceeeeeecchHHHHHHHHHHHHHhcCC
Q 040755 191 IAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMHQYKGLWVYIAGPIIGTILGGLAYNMIRFTD 255 (275)
Q Consensus 191 ~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~~a~~l~~~~~~~~ 255 (275)
+.+|+++.+..+..+++||+++||||+|||+++++.|+++|+||+||++|+++++++|++++.++
T Consensus 178 l~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~~~~~~wvywvgP~~Ga~l~a~~y~~l~~~~ 242 (256)
T PLN00167 178 LAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAGSFKNQAVYWVGPLLGGAVAGLLYDNVVFPT 242 (256)
T ss_pred HHHHHHHHHHHHhccCCCCcccCcccchHHHHhccCccCcEEEeHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999998543
No 12
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=100.00 E-value=3.3e-45 Score=320.19 Aligned_cols=213 Identities=44% Similarity=0.729 Sum_probs=182.3
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHhhhhhc-ccccC------CCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHH
Q 040755 36 SPVLQLLQKAIAEVIGTYFLIFTGCGSVAV-NKIYG------SVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITF 108 (275)
Q Consensus 36 ~~~~~~~~~~~~EfigTf~lv~~~~~~~~~-~~~~~------~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~ 108 (275)
.++.+++|++++||+||++++++++++... +.... ..+...+++++|+++.+.++.++++||||+||+||++.
T Consensus 2 ~~~~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla~ 81 (227)
T PF00230_consen 2 LKSPSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLAF 81 (227)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhhe
Confidence 345789999999999999999999886542 22211 12456788999999999999999999999999999999
Q ss_pred HHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcC--Cccccc--ccCCCCchhHHHHHHHHHHHHHHHhhhhcccCCC
Q 040755 109 AIFRHFPRKQVPIYIVAQLLGSVLASGSLYLIFDVK--DEAFFG--TIPVGTNVQSFVLEIIISFLLMFVISGVATDNRS 184 (275)
Q Consensus 109 ~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~--~~~~~~--~~p~~s~~~~~~~E~~~T~ilv~~i~~~~~~~~~ 184 (275)
++.|++++.+.+.|+++|++|+++|+++++.++++. ...... +.|..+..++++.|+++|++|+++++.+.++++.
T Consensus 82 ~l~g~~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~~ 161 (227)
T PF00230_consen 82 ALTGRISWKKAIVYIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADDKRK 161 (227)
T ss_dssp HHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTSS
T ss_pred eeeeeecccceeeEEeeccccccccccchhhcccCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhcccccc
Confidence 999999999999999999999999999999998753 222233 3344588999999999999999999998766654
Q ss_pred C--CchhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHhccCceeeeeecchHHHHHHHHHH
Q 040755 185 I--GELAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMHQYKGLWVYIAGPIIGTILGGLAY 248 (275)
Q Consensus 185 ~--~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~~a~~l~ 248 (275)
. +.+.|+.||+++.+..+..++.||+++||||+|+++++.+.|+++|+||++|++|+++|+++|
T Consensus 162 ~~~~~~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 162 FPLGPLAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSGIWDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp STSSGGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTHHTTTTHHHHHHHHHHHHHHHHH
T ss_pred cccccccceeEEEEEeecccccccccccccCchhhcCceeecccCCeEEEEEehHHHHHHHHHhhC
Confidence 3 346899999999999999999999999999999999999999999999999999999999987
No 13
>PLN00183 putative aquaporin NIP7; Provisional
Probab=100.00 E-value=6.1e-44 Score=318.18 Aligned_cols=221 Identities=43% Similarity=0.787 Sum_probs=190.1
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHhhhhhcccccC-CCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCC
Q 040755 36 SPVLQLLQKAIAEVIGTYFLIFTGCGSVAVNKIYG-SVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHF 114 (275)
Q Consensus 36 ~~~~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~-~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~ 114 (275)
..+.+.+|++++||++||+++|+++++...+.... ..++..+++++|+++.+.+++++++||+|+|||+|+++++.|++
T Consensus 39 ~~~~~~~~~~laEfigTfllvf~~~g~~~~~~~~~~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~g~i 118 (274)
T PLN00183 39 DMDLNPARMVLAEMVGTFILMFCVCGIIASTQLSGGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFGHF 118 (274)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhcCC
Confidence 34466789999999999999999998765433222 23455678899999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHhhcCCcccccccCCCCchhHHHHHHHHHHHHHHHhhhhcccCCCCCchhHHHHH
Q 040755 115 PRKQVPIYIVAQLLGSVLASGSLYLIFDVKDEAFFGTIPVGTNVQSFVLEIIISFLLMFVISGVATDNRSIGELAGIAIG 194 (275)
Q Consensus 115 ~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~p~~s~~~~~~~E~~~T~ilv~~i~~~~~~~~~~~~~~~~~ig 194 (275)
+|.++++||++|++|+++|+++++.+++... ....+.|..+..++++.|+++|++|+++++.+..++++.+...++.+|
T Consensus 119 ~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~-~~~~~~p~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~~~~~~~l~iG 197 (274)
T PLN00183 119 PWSKVPLYITAQTVGSVLATYVGVSVYGVKA-DLMTTKPAQGCSSAFWVEFIATFIVMFLAASLTSQPQSLGHLSGFVIG 197 (274)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccccCCCcccHHHHHHHHHHHHHHHHHhhheeeccccCCCCceehHHH
Confidence 9999999999999999999999888886432 334455666778999999999999999999876554444456789999
Q ss_pred HHHHHHHHHhcCCCCcccchhhhHHHHHhHhccCceeeeeecchHHHHHHHHHHHHHhcCCCC
Q 040755 195 MTILLNVLVAGPVSGASMNPARSLGPAIVMHQYKGLWVYIAGPIIGTILGGLAYNMIRFTDKP 257 (275)
Q Consensus 195 ~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~~a~~l~~~~~~~~~~ 257 (275)
+.+.+.+++.+++||+++||||+|++++++.+|+++|+||++|++|+++|+++|++++.+..+
T Consensus 198 l~v~~~v~~~g~~TG~~~NPArtlgpai~~~~~~~~wvy~vapilGailaa~l~~~l~~~~~~ 260 (274)
T PLN00183 198 IAIGLAVLITGPVSGGSMNPARSLGPAIVSWDFKDIWIYITAPTIGAVAGALMFHLLRLRTQP 260 (274)
T ss_pred HHHHHHHHhccCCCCCEeCHHHHHHHHHhCCChhheehHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 999999999999999999999999999999999999999999999999999999999765443
No 14
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=100.00 E-value=2.5e-41 Score=295.96 Aligned_cols=209 Identities=44% Similarity=0.791 Sum_probs=178.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcccccC--CCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCCCCchh
Q 040755 43 QKAIAEVIGTYFLIFTGCGSVAVNKIYG--SVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFPRKQVP 120 (275)
Q Consensus 43 ~~~~~EfigTf~lv~~~~~~~~~~~~~~--~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~~~~~~ 120 (275)
|++++||+|||++++.++++...+...+ ..++..++++||+++.+.+++++++||+|+|||+|+++++.|+.+|.+.+
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~~~~~~~~ 80 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIRVI 80 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhccccCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCCCCHHHHH
Confidence 5789999999999999999876544322 23456778999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCcc----------cccccCC--CCchhHHHHHHHHHHHHHHHhhhhcccCCC--CC
Q 040755 121 IYIVAQLLGSVLASGSLYLIFDVKDEA----------FFGTIPV--GTNVQSFVLEIIISFLLMFVISGVATDNRS--IG 186 (275)
Q Consensus 121 ~yi~aQ~lGa~~g~~l~~~~~~~~~~~----------~~~~~p~--~s~~~~~~~E~~~T~ilv~~i~~~~~~~~~--~~ 186 (275)
+|+++|++|+++|+.+++.++++.... .+++.|. .+..++++.|+++|++|+++++.+..+++. ..
T Consensus 81 ~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~~~~~ 160 (228)
T cd00333 81 PYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDPNGPPPG 160 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHccccccCCCC
Confidence 999999999999999999887542111 1123333 377899999999999999999998654432 33
Q ss_pred chhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHhc---cCceeeeeecchHHHHHHHHHHHHH
Q 040755 187 ELAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMHQ---YKGLWVYIAGPIIGTILGGLAYNMI 251 (275)
Q Consensus 187 ~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~---~~~~wvy~v~p~~Ga~~a~~l~~~~ 251 (275)
...++.+|+.+.+.++..+++||+++||||+++++++++. |+++|+||++|++|+++|+++|+++
T Consensus 161 ~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~~ 228 (228)
T cd00333 161 GLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDYV 228 (228)
T ss_pred CcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHHHHhC
Confidence 4678999999999999999999999999999999999985 9999999999999999999999863
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=100.00 E-value=5.5e-39 Score=279.01 Aligned_cols=202 Identities=43% Similarity=0.713 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHHHhhhhhccccc----CC--CCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCCCCchh
Q 040755 47 AEVIGTYFLIFTGCGSVAVNKIY----GS--VTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFPRKQVP 120 (275)
Q Consensus 47 ~EfigTf~lv~~~~~~~~~~~~~----~~--~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~~~~~~ 120 (275)
+||+||++++++++++....... +. .+...+++++|+++.+.+++++++||+|+|||+|++.++.|+++|.+++
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~~~~~~~~ 80 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCCCCHHHHH
Confidence 59999999999999887642211 11 1456789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCc---ccccc-cCCCCchhHHHHHHHHHHHHHHHhhhhcccCCC--CCchhHHHHH
Q 040755 121 IYIVAQLLGSVLASGSLYLIFDVKDE---AFFGT-IPVGTNVQSFVLEIIISFLLMFVISGVATDNRS--IGELAGIAIG 194 (275)
Q Consensus 121 ~yi~aQ~lGa~~g~~l~~~~~~~~~~---~~~~~-~p~~s~~~~~~~E~~~T~ilv~~i~~~~~~~~~--~~~~~~~~ig 194 (275)
.|+++|++|+++|+.+++.++++... ..... .+..+..++++.|+++|++|+++++....++++ .....++.+|
T Consensus 81 ~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~~~~iG 160 (216)
T TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDPRNRVPRGGFAPLAIG 160 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecCCCCCCCCccHHHHHH
Confidence 99999999999999999988864321 11111 123478899999999999999999987544322 1236899999
Q ss_pred HHHHHHHHHhcCCCCcccchhhhHHHHHhHh--ccCceeeeeecchHHHHHHHHHH
Q 040755 195 MTILLNVLVAGPVSGASMNPARSLGPAIVMH--QYKGLWVYIAGPIIGTILGGLAY 248 (275)
Q Consensus 195 ~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~--~~~~~wvy~v~p~~Ga~~a~~l~ 248 (275)
+.+...++..+.+||+++||||+|+++++++ +|+++|+||++|++|+++++++|
T Consensus 161 ~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~~~~~~vy~vap~~Ga~~a~~~y 216 (216)
T TIGR00861 161 LLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGWGNHWVYWVGPIIGAILGALVY 216 (216)
T ss_pred HHHHHHHHhCCCCcccccCchhhhhHHHHhccccccceeHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999987 89999999999999999999875
No 16
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.59 E-value=6.6e-15 Score=132.20 Aligned_cols=98 Identities=26% Similarity=0.333 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCCCCch
Q 040755 40 QLLQKAIAEVIGTYFLIFTGCGSVAVNKIYGSVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFPRKQV 119 (275)
Q Consensus 40 ~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~~~~~ 119 (275)
+..+.++.|+++|++|++++++....+... .. ..++++|+.+++.+++.+++||+|+|||+|+++++.++ .|.++
T Consensus 157 s~~~a~~~E~l~TfiLv~~i~~~~~~~~~~--~~--~~~l~iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~-~~~~~ 231 (283)
T PLN00182 157 SSGQALVAEIIISFLLMFVISGVATDSRAV--GE--LAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMG-RYKGI 231 (283)
T ss_pred chHHHHHHHHHHHHHHHHHHHhheeccccC--Cc--chhHHHHHHHHHHHHHccccCccccChHHHHHHHHHhc-cccce
Confidence 467899999999999999888754332211 11 24678899999999999999999999999999999864 57899
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhh
Q 040755 120 PIYIVAQLLGSVLASGSLYLIFD 142 (275)
Q Consensus 120 ~~yi~aQ~lGa~~g~~l~~~~~~ 142 (275)
|+||++|++|+++|+++++.+..
T Consensus 232 wvY~vap~lGA~lgally~~l~~ 254 (283)
T PLN00182 232 WVYIVGPFVGIIAGGFVYNLIRF 254 (283)
T ss_pred eHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999888763
No 17
>PLN00184 aquaporin NIP1; Provisional
Probab=99.58 E-value=2.6e-15 Score=135.66 Aligned_cols=99 Identities=23% Similarity=0.371 Sum_probs=83.7
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhcccC--CC-CCch--hHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHh-ccCc
Q 040755 156 TNVQSFVLEIIISFLLMFVISGVATDN--RS-IGEL--AGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMH-QYKG 229 (275)
Q Consensus 156 s~~~~~~~E~~~T~ilv~~i~~~~~~~--~~-~~~~--~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~~~~ 229 (275)
+.++.++.|+++|++|++++++..... +. .... .++.+|+++.+.+++.+.+||+|+|||++|++++.++ +|..
T Consensus 52 ~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~~~~~~ 131 (296)
T PLN00184 52 PFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPLKQ 131 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCCCCHHH
Confidence 467899999999999999998864221 11 1123 3566799999999999999999999999999999887 8999
Q ss_pred eeeeeecchHHHHHHHHHHHHHhcC
Q 040755 230 LWVYIAGPIIGTILGGLAYNMIRFT 254 (275)
Q Consensus 230 ~wvy~v~p~~Ga~~a~~l~~~~~~~ 254 (275)
.|+||++|++|+++|+++++.++..
T Consensus 132 ~~~YiiaQllGA~lga~~~~~l~~~ 156 (296)
T PLN00184 132 VPAYVISQVIGSTLAAATLRLLFGL 156 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999988753
No 18
>PLN00026 aquaporin NIP; Provisional
Probab=99.58 E-value=2.8e-15 Score=135.20 Aligned_cols=99 Identities=22% Similarity=0.383 Sum_probs=83.7
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhcccC-CCC--Cch--hHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHh-ccCc
Q 040755 156 TNVQSFVLEIIISFLLMFVISGVATDN-RSI--GEL--AGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMH-QYKG 229 (275)
Q Consensus 156 s~~~~~~~E~~~T~ilv~~i~~~~~~~-~~~--~~~--~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~~~~ 229 (275)
+.+|.++.||++|++|++++++....+ +.. ... .++.+|+++.+.+++.+.+||+++||||++++++.++ +|.+
T Consensus 69 ~~~r~~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g~~~~~~ 148 (298)
T PLN00026 69 SLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWKH 148 (298)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhCCCcHHH
Confidence 567999999999999999998643222 111 122 3578999999999999999999999999999999876 7999
Q ss_pred eeeeeecchHHHHHHHHHHHHHhcC
Q 040755 230 LWVYIAGPIIGTILGGLAYNMIRFT 254 (275)
Q Consensus 230 ~wvy~v~p~~Ga~~a~~l~~~~~~~ 254 (275)
.|+||++|++|+++|+++++.++.+
T Consensus 149 ~~~YiiaQilGAi~aa~~~~~~~~~ 173 (298)
T PLN00026 149 VPAYIAAQVSASICASFALKGVFHP 173 (298)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999988754
No 19
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.58 E-value=1e-14 Score=130.51 Aligned_cols=111 Identities=22% Similarity=0.268 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCCCCchh
Q 040755 41 LLQKAIAEVIGTYFLIFTGCGSVAVNKIYGSVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFPRKQVP 120 (275)
Q Consensus 41 ~~~~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~~~~~~ 120 (275)
.++.++.|+++|+++++.+++....+.... . ..++.+|+.+.+.+++.+++||+|+|||+|+++++.+ .+|.+.|
T Consensus 160 ~~~~~~~E~v~T~iLv~~i~~~~~~~~~~~--~--~~~l~iGl~v~~~v~~~g~~TG~~~NPArtlgpai~~-~~~~~~w 234 (274)
T PLN00183 160 CSSAFWVEFIATFIVMFLAASLTSQPQSLG--H--LSGFVIGIAIGLAVLITGPVSGGSMNPARSLGPAIVS-WDFKDIW 234 (274)
T ss_pred HHHHHHHHHHHHHHHHHhhheeeccccCCC--C--ceehHHHHHHHHHHHhccCCCCCEeCHHHHHHHHHhC-CChhhee
Confidence 578999999999999998887644321111 1 1356789999999999999999999999999999987 5799999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCcccccccCCCC
Q 040755 121 IYIVAQLLGSVLASGSLYLIFDVKDEAFFGTIPVGT 156 (275)
Q Consensus 121 ~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~p~~s 156 (275)
+||++|++|+++|+++++.+............|+.|
T Consensus 235 vy~vapilGailaa~l~~~l~~~~~~~~~~~~~~~~ 270 (274)
T PLN00183 235 IYITAPTIGAVAGALMFHLLRLRTQPCSPNSSPNTS 270 (274)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCchh
Confidence 999999999999999999988654444444555544
No 20
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.57 E-value=1.3e-14 Score=127.10 Aligned_cols=102 Identities=23% Similarity=0.254 Sum_probs=84.4
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCC-
Q 040755 36 SPVLQLLQKAIAEVIGTYFLIFTGCGSVAVNKIYGSVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHF- 114 (275)
Q Consensus 36 ~~~~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~- 114 (275)
....+.+|.++.|+++|+++++..+........ .......++.+|+.+...++..+++||+|+|||+++++.+.++.
T Consensus 124 ~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~~~--~~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~ 201 (228)
T cd00333 124 SPGVSNGNAFFVEFIGTFILVLVVFATTDDPNG--PPPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLA 201 (228)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHcccccc--CCCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccc
Confidence 334568899999999999999988876432211 11223457888999999999999999999999999999999987
Q ss_pred -CCCchhHHHHHHHHHHHHHHHHHHH
Q 040755 115 -PRKQVPIYIVAQLLGSVLASGSLYL 139 (275)
Q Consensus 115 -~~~~~~~yi~aQ~lGa~~g~~l~~~ 139 (275)
+|.+.|+||++|++|+++|+++++.
T Consensus 202 ~~~~~~~vy~vap~lGai~aa~l~~~ 227 (228)
T cd00333 202 RHWHYFWVYWVGPLIGAIAGALVYDY 227 (228)
T ss_pred cccceeehhhhHHHHHHHHHHHHHHh
Confidence 7999999999999999999987653
No 21
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.49 E-value=5.8e-14 Score=122.72 Aligned_cols=100 Identities=28% Similarity=0.301 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCCCCc
Q 040755 39 LQLLQKAIAEVIGTYFLIFTGCGSVAVNKIYGSVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFPRKQ 118 (275)
Q Consensus 39 ~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~~~~ 118 (275)
.+..+.++.|++.||.|+++.++.....+.. ...++.+|+.+.+.+++.+++||+++|||+++++++..+. |..
T Consensus 129 ~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~~-----~~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~~-w~~ 202 (238)
T KOG0223|consen 129 LSTGQGLVIEIILTFILVFTVFATATDPRRS-----ELAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYGS-WDD 202 (238)
T ss_pred CCcchhHHHHHHHHHHHhheeEEEeecCCCc-----ccHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhcC-CCc
Confidence 4477899999999999999877643332222 2456778999999999999999999999999999998864 999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcC
Q 040755 119 VPIYIVAQLLGSVLASGSLYLIFDVK 144 (275)
Q Consensus 119 ~~~yi~aQ~lGa~~g~~l~~~~~~~~ 144 (275)
+|+||++|++|+++++++++.++..+
T Consensus 203 hwiYwvgP~~Ga~~a~~~y~~v~~~~ 228 (238)
T KOG0223|consen 203 HWIYWVGPLLGAILAALIYRLVFIPD 228 (238)
T ss_pred EEEEEhhHHHHHHHHHHHHHHhccCc
Confidence 99999999999999999998888543
No 22
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.48 E-value=1.8e-13 Score=118.89 Aligned_cols=96 Identities=22% Similarity=0.256 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhc-CCCCC
Q 040755 39 LQLLQKAIAEVIGTYFLIFTGCGSVAVNKIYGSVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFR-HFPRK 117 (275)
Q Consensus 39 ~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g-~~~~~ 117 (275)
.+.++.++.|+++|+++++..+.....+... . .....++.+|+.+...++..+++||+|+|||+++++.+.+ ..+|.
T Consensus 119 ~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~-~-~~~~~~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~~~~~ 196 (216)
T TIGR00861 119 VSSGQAFFVEFIGTAILVLVIFATTDPRNRV-P-RGGFAPLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAGLAGWG 196 (216)
T ss_pred ccHHHHHHHHHHHHHHHHHHHheeecCCCCC-C-CCccHHHHHHHHHHHHHHhCCCCcccccCchhhhhHHHHhcccccc
Confidence 4678999999999999999888654321111 1 1113578889999999999999999999999999999976 46899
Q ss_pred chhHHHHHHHHHHHHHHHH
Q 040755 118 QVPIYIVAQLLGSVLASGS 136 (275)
Q Consensus 118 ~~~~yi~aQ~lGa~~g~~l 136 (275)
+.|+||++|++|+++|+.+
T Consensus 197 ~~~vy~vap~~Ga~~a~~~ 215 (216)
T TIGR00861 197 NHWVYWVGPIIGAILGALV 215 (216)
T ss_pred ceeHHHHHHHHHHHHHHHh
Confidence 9999999999999999865
No 23
>PLN00166 aquaporin TIP2; Provisional
Probab=99.48 E-value=4.9e-14 Score=124.80 Aligned_cols=98 Identities=23% Similarity=0.384 Sum_probs=82.7
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhccc--CC---C---C-Cc-hhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHh
Q 040755 156 TNVQSFVLEIIISFLLMFVISGVATD--NR---S---I-GE-LAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMH 225 (275)
Q Consensus 156 s~~~~~~~E~~~T~ilv~~i~~~~~~--~~---~---~-~~-~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~ 225 (275)
+..+.++.|+++|++|+++.++...+ +. + . .. ..++.+|+.+.+.+++.+++||+++||||++++++.++
T Consensus 16 ~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~g~ 95 (250)
T PLN00166 16 ASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGN 95 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCC
Confidence 55789999999999999999987433 11 1 1 11 25678999999999999999999999999999999755
Q ss_pred -ccCceeeeeecchHHHHHHHHHHHHHhc
Q 040755 226 -QYKGLWVYIAGPIIGTILGGLAYNMIRF 253 (275)
Q Consensus 226 -~~~~~wvy~v~p~~Ga~~a~~l~~~~~~ 253 (275)
+|...|+||++|++|+++|+.+++.++.
T Consensus 96 ~~~~~~~~y~~aq~lGa~~~a~~~~~~~~ 124 (250)
T PLN00166 96 ITIITGFFYWIAQCLGSIVACLLLVFVTN 124 (250)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 6888999999999999999999998864
No 24
>PLN00167 aquaporin TIP5; Provisional
Probab=99.48 E-value=8.3e-14 Score=123.72 Aligned_cols=99 Identities=22% Similarity=0.381 Sum_probs=84.3
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhcccCC---C--C-----CchhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHh
Q 040755 156 TNVQSFVLEIIISFLLMFVISGVATDNR---S--I-----GELAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMH 225 (275)
Q Consensus 156 s~~~~~~~E~~~T~ilv~~i~~~~~~~~---~--~-----~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~ 225 (275)
+.++.++.|+++|++|+++.++...+.+ . . ....++.+|+++.+.+++.+++||+++|||+++++.+.++
T Consensus 20 ~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~~g~ 99 (256)
T PLN00167 20 NALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVGGH 99 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHhCC
Confidence 5678999999999999999988754321 1 0 1136799999999999999999999999999999999866
Q ss_pred -ccCceeeeeecchHHHHHHHHHHHHHhcC
Q 040755 226 -QYKGLWVYIAGPIIGTILGGLAYNMIRFT 254 (275)
Q Consensus 226 -~~~~~wvy~v~p~~Ga~~a~~l~~~~~~~ 254 (275)
.|...|+||++|++|+++|+.+++.++..
T Consensus 100 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 129 (256)
T PLN00167 100 ISVPTAMFYWISQMLASVMACLFLKVTTVG 129 (256)
T ss_pred CcHhhhhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 68999999999999999999999887543
No 25
>PRK05420 aquaporin Z; Provisional
Probab=99.43 E-value=2.9e-13 Score=118.73 Aligned_cols=97 Identities=28% Similarity=0.337 Sum_probs=80.3
Q ss_pred hhHHHHHHHHHHHHHHHhhhhccc----CCCC-Cch-hHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHh-ccCce
Q 040755 158 VQSFVLEIIISFLLMFVISGVATD----NRSI-GEL-AGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMH-QYKGL 230 (275)
Q Consensus 158 ~~~~~~E~~~T~ilv~~i~~~~~~----~~~~-~~~-~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~~~~~ 230 (275)
.|.++.|+++|++|+++.+..... ++.. +.. .++.+|+++.+.+++.+++||+|+|||+++++.+.++ +|...
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~i~~~~~ 81 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGRFPAKEL 81 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCCCCHHHh
Confidence 478999999999999998775321 1111 122 3789999999999999999999999999999999876 79999
Q ss_pred eeeeecchHHHHHHHHHHHHHhcC
Q 040755 231 WVYIAGPIIGTILGGLAYNMIRFT 254 (275)
Q Consensus 231 wvy~v~p~~Ga~~a~~l~~~~~~~ 254 (275)
|+||++|++|+++|+++.+.++..
T Consensus 82 ~~Y~~aQ~lGa~~ga~l~~~~~~~ 105 (231)
T PRK05420 82 VPYIIAQVVGGIAAAAVLYLIASG 105 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999877766643
No 26
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.43 E-value=1.8e-13 Score=123.85 Aligned_cols=99 Identities=26% Similarity=0.475 Sum_probs=83.5
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhcccCCC---C-C-chhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHh-ccCc
Q 040755 156 TNVQSFVLEIIISFLLMFVISGVATDNRS---I-G-ELAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMH-QYKG 229 (275)
Q Consensus 156 s~~~~~~~E~~~T~ilv~~i~~~~~~~~~---~-~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~~~~ 229 (275)
+.++.+++|+++|++++++.++...+... . + ...++.+|+++.+.+++.+.+||+++|||+++++++.++ +|..
T Consensus 48 ~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~i~~~~ 127 (294)
T PTZ00016 48 PNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFPWKK 127 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhccCCHHH
Confidence 35689999999999999998886533211 1 1 134678999999999999999999999999999999987 7999
Q ss_pred eeeeeecchHHHHHHHHHHHHHhcC
Q 040755 230 LWVYIAGPIIGTILGGLAYNMIRFT 254 (275)
Q Consensus 230 ~wvy~v~p~~Ga~~a~~l~~~~~~~ 254 (275)
.|+||++|++|+++|+++.+.++.+
T Consensus 128 ~~~YiiaQ~lGa~~ga~ll~~~~~~ 152 (294)
T PTZ00016 128 LPGYFVAQLLGAFVGAACVYGLYYG 152 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 9999999999999999998887654
No 27
>PLN00027 aquaporin TIP; Provisional
Probab=99.42 E-value=3.3e-13 Score=119.83 Aligned_cols=98 Identities=21% Similarity=0.334 Sum_probs=81.5
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhcc------cCCC--CCc--hhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHh
Q 040755 156 TNVQSFVLEIIISFLLMFVISGVAT------DNRS--IGE--LAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMH 225 (275)
Q Consensus 156 s~~~~~~~E~~~T~ilv~~i~~~~~------~~~~--~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~ 225 (275)
..++.++.|+++|++|+++.++... ++++ ... ..++.+|+.+.+.+++.+.+||+++||||++++.+.++
T Consensus 18 ~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~g~ 97 (252)
T PLN00027 18 DALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGGN 97 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHhCC
Confidence 4568999999999999999887631 1111 111 35799999999999999999999999999999998665
Q ss_pred -ccCceeeeeecchHHHHHHHHHHHHHhc
Q 040755 226 -QYKGLWVYIAGPIIGTILGGLAYNMIRF 253 (275)
Q Consensus 226 -~~~~~wvy~v~p~~Ga~~a~~l~~~~~~ 253 (275)
.|...|+||++|++|+++|+++++.+..
T Consensus 98 ~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~ 126 (252)
T PLN00027 98 ITLLRGILYWIAQLLGSVVACLLLKFSTG 126 (252)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6888999999999999999999987753
No 28
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.36 E-value=5.7e-13 Score=118.03 Aligned_cols=99 Identities=26% Similarity=0.478 Sum_probs=82.5
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhcccC----CCCCch--hHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHh-ccC
Q 040755 156 TNVQSFVLEIIISFLLMFVISGVATDN----RSIGEL--AGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMH-QYK 228 (275)
Q Consensus 156 s~~~~~~~E~~~T~ilv~~i~~~~~~~----~~~~~~--~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~~~ 228 (275)
...|.+++||++|++|+++.+++.... ...+.. ..+.+|+++++.+++++.+||+|+|||.+|+..++++ +|.
T Consensus 30 ~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~~p~~ 109 (316)
T KOG0224|consen 30 ELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGRLPWK 109 (316)
T ss_pred HHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcCCChh
Confidence 457899999999999999988765321 122222 3589999999999999999999999999999999987 799
Q ss_pred ceeeeeecchHHHHHHHHHHHHHhcC
Q 040755 229 GLWVYIAGPIIGTILGGLAYNMIRFT 254 (275)
Q Consensus 229 ~~wvy~v~p~~Ga~~a~~l~~~~~~~ 254 (275)
.+.+|.++|++||++|+.....+|++
T Consensus 110 k~p~Y~~aQ~iGAF~gaa~~y~~y~d 135 (316)
T KOG0224|consen 110 KFPVYVLAQFIGAFLGAATVYGLYYD 135 (316)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998876666543
No 29
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.32 E-value=2.6e-12 Score=112.22 Aligned_cols=104 Identities=22% Similarity=0.386 Sum_probs=85.2
Q ss_pred chhHHHHHHHHHHHHHHHhhhhccc----C---CCCCc-hhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHh-cc
Q 040755 157 NVQSFVLEIIISFLLMFVISGVATD----N---RSIGE-LAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMH-QY 227 (275)
Q Consensus 157 ~~~~~~~E~~~T~ilv~~i~~~~~~----~---~~~~~-~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~~ 227 (275)
..+.++.||++|++|++...++... + ...+. ...+.+|+.+.+.+++.+++||+|+|||.+++.++.++ +|
T Consensus 4 ~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~fp~ 83 (241)
T COG0580 4 LTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRFPW 83 (241)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCCCH
Confidence 3466899999999999998775421 1 11122 25789999999999999999999999999999999887 79
Q ss_pred CceeeeeecchHHHHHHHHHHHHHhcCCCCccc
Q 040755 228 KGLWVYIAGPIIGTILGGLAYNMIRFTDKPLRE 260 (275)
Q Consensus 228 ~~~wvy~v~p~~Ga~~a~~l~~~~~~~~~~~~~ 260 (275)
+....||++|++|+++|+.+...+++.+..+.+
T Consensus 84 ~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~ 116 (241)
T COG0580 84 RKVLPYIVAQVLGAFAGAALLYLLYYGKILETE 116 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 999999999999999999888888776554443
No 30
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.14 E-value=2.2e-10 Score=100.12 Aligned_cols=97 Identities=24% Similarity=0.324 Sum_probs=76.8
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCCCC
Q 040755 38 VLQLLQKAIAEVIGTYFLIFTGCGSVAVNKIYGSVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFPRK 117 (275)
Q Consensus 38 ~~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~~~ 117 (275)
+.+..+.++.|+++|+++++........++.. ..+. ..++.+|+.+....+..+..||+.+|||+++++.+.... |.
T Consensus 131 ~~s~~~~~~~E~~~t~il~~~i~~~~~~~~~~-~~~~-~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~~-~~ 207 (227)
T PF00230_consen 131 GISLGQAFFSEFIGTFILVLVILAVADDKRKF-PLGP-LAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSGI-WD 207 (227)
T ss_dssp TSSHHHHHHHHHHHHHHHHHHHHHHTSTTSSS-TSSG-GHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHTH-HT
T ss_pred cchhhhhhhhhhhhhhHHHhhhhhhccccccc-cccc-ccceeEEEEEeecccccccccccccCchhhcCceeeccc-CC
Confidence 35578999999999999999777654332222 1111 246777999988888999999999999999999998755 88
Q ss_pred chhHHHHHHHHHHHHHHHHH
Q 040755 118 QVPIYIVAQLLGSVLASGSL 137 (275)
Q Consensus 118 ~~~~yi~aQ~lGa~~g~~l~ 137 (275)
..|+||++|++|+++|++++
T Consensus 208 ~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 208 YFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp TTTHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEehHHHHHHHHHhhC
Confidence 99999999999999999753
No 31
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=94.89 E-value=0.64 Score=41.58 Aligned_cols=178 Identities=14% Similarity=0.162 Sum_probs=89.9
Q ss_pred chhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcCC-----ccc
Q 040755 74 FPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFPRKQVPIYIVAQLLGSVLASGSLYLIFDVKD-----EAF 148 (275)
Q Consensus 74 ~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~-----~~~ 148 (275)
.+.-++.+++++...++.-+..-=+ |=-........++++|++.+--|+-=.+|=++|++++.+++.-.. +..
T Consensus 64 ~lvg~~~F~~GLilVv~~g~ELfT~--n~m~~t~~~~~k~Is~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~~~ 141 (265)
T COG2116 64 KLVGGLVFSLGLILVVIAGSELFTS--NTMLLTVGVLSKKISWGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTANGQ 141 (265)
T ss_pred HHHHHHHHHHHHHHhhhhCcccccc--chhHHHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccch
Confidence 3444666667776666665544211 333333445568889988877777667777777766655552111 111
Q ss_pred cc--------ccCCCCchhHHHHHHHHHHHHHHHhhhhcccCCCCCchhHHHHHHHHHHHHHHhcCCCCcccchhhhHHH
Q 040755 149 FG--------TIPVGTNVQSFVLEIIISFLLMFVISGVATDNRSIGELAGIAIGMTILLNVLVAGPVSGASMNPARSLGP 220 (275)
Q Consensus 149 ~~--------~~p~~s~~~~~~~E~~~T~ilv~~i~~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~ 220 (275)
.+ .--..+..+.|.--.+|-++..+.++..-..+.. .-.-+.+-+.+++.+. .++.=...|-..-.-.
T Consensus 142 ~~~~~~~~a~~K~~~t~~~~F~~GI~cN~lVclAvwm~~~~k~~--~~K~~~m~~pv~~Fv~--~GfeH~VANm~~i~~~ 217 (265)
T COG2116 142 WGLFVLGVAEHKLHHTFLEAFAKGILCNWLVCLAVWMSYSAKDG--AAKIFAIILPVMLFVA--SGFEHSVANMFMIPWA 217 (265)
T ss_pred hHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHhcccch--hhHHHHHHHHHHHHHH--cCCceeeehHHHHHHH
Confidence 11 0012245677777777777777777664211111 1223444444443333 3333334453322111
Q ss_pred HHhHh--ccCc-e---ee-eeecchHH-HHHHHHHHHHHhcCCCC
Q 040755 221 AIVMH--QYKG-L---WV-YIAGPIIG-TILGGLAYNMIRFTDKP 257 (275)
Q Consensus 221 ~l~~~--~~~~-~---wv-y~v~p~~G-a~~a~~l~~~~~~~~~~ 257 (275)
+...+ +|.+ . ++ =.+|.++| +++-++.|++++.++++
T Consensus 218 ~~~~~~~~~~~fi~~Nlipv~lGNivGG~v~vgl~Y~~~~~~~~~ 262 (265)
T COG2116 218 AVFSGALTWADFILKNLIPVTLGNIVGGAVFVGLMYWYLYRKQNR 262 (265)
T ss_pred HHcCChhhhHHHHHHHHHHHHHhchhcchhhhhHHHHHhcccccc
Confidence 22211 2333 1 22 23566665 46778888877765443
No 32
>PRK11562 nitrite transporter NirC; Provisional
Probab=92.45 E-value=1 Score=40.50 Aligned_cols=99 Identities=10% Similarity=0.068 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcC---Cccccc----
Q 040755 78 CVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFPRKQVPIYIVAQLLGSVLASGSLYLIFDVK---DEAFFG---- 150 (275)
Q Consensus 78 a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~---~~~~~~---- 150 (275)
+..+++++...++.-+..-=+ |=.......+.|+.++.+.+-.|.-=++|=++|++++..++... ......
T Consensus 62 g~~F~~GLilVi~~G~eLFTg--n~~~~~~~~~~~~~s~~~~lr~w~iv~~GNliGa~~~A~l~~~~~~~~~~~~~~~~~ 139 (268)
T PRK11562 62 GATFGIALTLVIIAGSELFTG--HTMFLTFGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTSIVH 139 (268)
T ss_pred HHHHHHHHHHHHHhCcccccc--chHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHH
Confidence 445566666665554444212 43333345667888888777666666666666665554443211 010000
Q ss_pred ----ccCCCCchhHHHHHHHHHHHHHHHhhhh
Q 040755 151 ----TIPVGTNVQSFVLEIIISFLLMFVISGV 178 (275)
Q Consensus 151 ----~~p~~s~~~~~~~E~~~T~ilv~~i~~~ 178 (275)
..-..+..+.|+-=.+|-++..+.+...
T Consensus 140 ~ia~~K~~~~~~~~f~~gI~CNwLVclavw~~ 171 (268)
T PRK11562 140 SVALAKTTAPAMVLFFKGALCNWLVCLAIWMA 171 (268)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0112356677777777888887777654
No 33
>PRK09713 focB putative formate transporter; Provisional
Probab=82.62 E-value=20 Score=32.53 Aligned_cols=98 Identities=11% Similarity=0.078 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcCC-----ccccc--
Q 040755 78 CVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFPRKQVPIYIVAQLLGSVLASGSLYLIFDVKD-----EAFFG-- 150 (275)
Q Consensus 78 a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~-----~~~~~-- 150 (275)
++.+.+++...++.-+..-=+ |=. ++.....|+.++++.+-.|.-=++|=++|++++-.++.... ....+
T Consensus 71 g~~F~vGLilIv~~g~ELfTg--N~~-~~~~~~~~~i~~~~~l~~w~iv~~GNlvGal~~A~l~~~s~~~~~~~~~~~~~ 147 (282)
T PRK09713 71 GLCFTLGFILLAVCGTSLFTS--SVM-TVMAKSRGVISWRTWLINALLVACGNLAGIACFSLLIWFSGLVMSENAMWGVA 147 (282)
T ss_pred HHHHHHHHHHHHHhCccccHH--HHH-HHHHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchhHHHH
Confidence 445555565555554444222 322 22234578888877764444444444444444333322110 01000
Q ss_pred ------ccCCCCchhHHHHHHHHHHHHHHHhhhh
Q 040755 151 ------TIPVGTNVQSFVLEIIISFLLMFVISGV 178 (275)
Q Consensus 151 ------~~p~~s~~~~~~~E~~~T~ilv~~i~~~ 178 (275)
..-..+..+.|+--.+|-++..+.++..
T Consensus 148 ~~~ia~~K~~~~~~~~F~~gI~CN~lVclaV~~~ 181 (282)
T PRK09713 148 VLHCAEGKMHHTFTESVSLGIMCNLMVCLALWMS 181 (282)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1112367788888888888888887753
No 34
>PRK10805 formate transporter; Provisional
Probab=80.50 E-value=45 Score=30.25 Aligned_cols=96 Identities=7% Similarity=0.111 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHhcCC-CccccchHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcCC------ccccc
Q 040755 78 CVVWGLIVMVMIYSVGHI-SGAHFNPAVTITFAIFRHFPRKQVPIYIVAQLLGSVLASGSLYLIFDVKD------EAFFG 150 (275)
Q Consensus 78 a~~~g~~v~~~i~~~g~i-SG~h~NPavTl~~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~------~~~~~ 150 (275)
++.+.+++...++.-+.. +| |-..+++ .+.||.++.+.+-.|.-=++|=++|++++-.+..... .....
T Consensus 72 ~~~F~vGlilIvl~g~eLFTg---n~l~~~~-~~~~~~~~~~~lr~w~iv~~GNliGal~~a~l~~~s~~~~~~~~~~~~ 147 (285)
T PRK10805 72 GICFSLGLILCVVCGADLFTS---TVLIVVA-KASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGL 147 (285)
T ss_pred HHHHHHHHHHHHHhCcccchh---hHHHHHH-HHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCccHHHH
Confidence 444555555555554444 33 6555543 5678888887775444444555555444433321110 01000
Q ss_pred -------ccCCCCchhHHHHHHHHHHHHHHHhhh
Q 040755 151 -------TIPVGTNVQSFVLEIIISFLLMFVISG 177 (275)
Q Consensus 151 -------~~p~~s~~~~~~~E~~~T~ilv~~i~~ 177 (275)
..-..+..+.|+-=.+|-++..+.++.
T Consensus 148 ~~~~~a~~K~~~~~~~~f~~gI~CN~lVclaV~~ 181 (285)
T PRK10805 148 NVLQTADHKVHHTFIEAVCLGILANLMVCLAVWM 181 (285)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 011235677777777888888877765
No 35
>TIGR00790 fnt formate/nitrite transporter. symport. HCO2 - efflux may be driven by the membrane potential by a uniport mechanism or by H+ antiport.
Probab=79.43 E-value=24 Score=31.01 Aligned_cols=77 Identities=16% Similarity=0.159 Sum_probs=42.8
Q ss_pred chHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcC-----Cc-cccc-------ccCCCCchhHHHHHHHH
Q 040755 101 NPAVTITFAIFRHFPRKQVPIYIVAQLLGSVLASGSLYLIFDVK-----DE-AFFG-------TIPVGTNVQSFVLEIII 167 (275)
Q Consensus 101 NPavTl~~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~-----~~-~~~~-------~~p~~s~~~~~~~E~~~ 167 (275)
|-......++.|+.++.+.+-.|.-=.+|=++|+.++-.+.... +. .... ..-..+..+.++-=+++
T Consensus 68 n~~~~~~~~~~~~~~~~~~l~~w~~~~~gNlvG~~~~a~l~~~~~~~~~~~~~~~~~~~~~a~~K~~~~~~~~f~~gilc 147 (239)
T TIGR00790 68 NTLFVTMALLRGKISWGDLLINWVVSWLGNLVGALFVAYLFSYLGGILTANGPWGVGSLAIAEHKAHHTFVEAFFLGILC 147 (239)
T ss_pred chHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCccHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 43333344667888888877666666666666665554443211 11 0100 11123566677777777
Q ss_pred HHHHHHHhhh
Q 040755 168 SFLLMFVISG 177 (275)
Q Consensus 168 T~ilv~~i~~ 177 (275)
.+++.+.+..
T Consensus 148 n~lV~lav~~ 157 (239)
T TIGR00790 148 NWLVCLAVWM 157 (239)
T ss_pred HHHHHHHHHH
Confidence 7777777654
No 36
>PF01226 Form_Nir_trans: Formate/nitrite transporter; InterPro: IPR000292 Proteins in this entry belong to the Formate-Nitrite Transporter (FNT) family (TC 2.A.44). The prokaryotic proteins of the FNT family probably function in the transport of the structurally related compounds, formate and nitrite. The homologous yeast protein may function as a short chain aliphatic carboxylate H+ symporter, transporting formate, acetate and propionate, and functioning primarily as an acetate uptake permease.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3Q7K_H 3KLY_E 3KLZ_A 3TDX_C 3TE2_B 3TDS_B 3TDR_E 3TDO_C 3TE1_B 3TDP_C ....
Probab=76.38 E-value=30 Score=30.71 Aligned_cols=101 Identities=12% Similarity=0.089 Sum_probs=59.3
Q ss_pred hHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcCCccc-----cc
Q 040755 76 GICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFPRKQVPIYIVAQLLGSVLASGSLYLIFDVKDEAF-----FG 150 (275)
Q Consensus 76 ~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~-----~~ 150 (275)
..++.+++++...+..-+..-=+ |-......++.|+.++.+.+--|.-=.+|=++|++++-.+........ ..
T Consensus 59 ~~g~~F~~Gl~lIv~~g~eLfTg--n~~~~~~~~~~~~~~~~~~l~~w~~v~~gNliG~~~~a~l~~~~~~~~~~~~~~~ 136 (250)
T PF01226_consen 59 VGGLVFPIGLVLIVFLGGELFTG--NMMVMTLALLNKRISWKKLLRNWGIVYLGNLIGALLFAYLFAFSGGFMSSPAMGE 136 (250)
T ss_dssp HHHHHHTHHHHHHHHHT---TTT--TCHHHHHHHCTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTGGGTTTHHHH
T ss_pred HHHHHHHHHHHHHHHhcchhccc--chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccHHHHH
Confidence 34555666666666665544222 666555667778888888777666666666666666555543211110 00
Q ss_pred -------ccCCCCchhHHHHHHHHHHHHHHHhhhh
Q 040755 151 -------TIPVGTNVQSFVLEIIISFLLMFVISGV 178 (275)
Q Consensus 151 -------~~p~~s~~~~~~~E~~~T~ilv~~i~~~ 178 (275)
..-..+.++.|+-=.+|-++..+.++..
T Consensus 137 ~~~~~a~~K~~~~~~~~f~~gI~cN~lVclav~~~ 171 (250)
T PF01226_consen 137 YLISVAEHKVSHTFWELFFRGILCNWLVCLAVWLA 171 (250)
T ss_dssp HHHHHHHCCSSS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1123367778888888888888888765
No 37
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=60.10 E-value=1.9e+02 Score=28.87 Aligned_cols=113 Identities=20% Similarity=0.365 Sum_probs=60.8
Q ss_pred hcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcCCcccccccCCCCchhHHHHHHHHHHHHHHHhhhhcccCCCCCchhH
Q 040755 111 FRHFPRKQVPIYIVAQLLGSVLASGSLYLIFDVKDEAFFGTIPVGTNVQSFVLEIIISFLLMFVISGVATDNRSIGELAG 190 (275)
Q Consensus 111 ~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~p~~s~~~~~~~E~~~T~ilv~~i~~~~~~~~~~~~~~~ 190 (275)
....+......++.+.++|+.+|.++.+.+++.-+ . +.+++..+...+++.+....++ ....
T Consensus 381 ~~~~P~~~~~~~~~G~l~~~~~a~~~~~~vlP~~~--------------~-f~~L~l~l~~~l~~~~~~~~~p---~~~~ 442 (650)
T PF04632_consen 381 TLDNPAPALRLFLIGALLGAVLAFLYLFFVLPHLD--------------G-FPLLALVLAPFLFLGGLLMARP---RTAY 442 (650)
T ss_pred CCcChHHHHHHHHHHHHHHHHHHHHHHHHhhhccC--------------c-HHHHHHHHHHHHHHHHHHHcCc---hHHH
Confidence 34456777788999999999999988888885321 1 1122222222222222111111 2333
Q ss_pred HHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHhccCceeeeeecchHHHHHHHHHHHHHhcCC
Q 040755 191 IAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMHQYKGLWVYIAGPIIGTILGGLAYNMIRFTD 255 (275)
Q Consensus 191 ~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~~a~~l~~~~~~~~ 255 (275)
...++.+...... +.......|++.-+-. .++-++|.+++.+.++++.+.+
T Consensus 443 ~g~~~~v~f~~~~-~~~n~~~~d~~~f~n~-------------~la~l~G~~~a~l~~~li~p~~ 493 (650)
T PF04632_consen 443 IGLGFAVFFLLLL-GPGNPYSYDFATFLNR-------------ALAILLGIVIAALVFRLIRPFS 493 (650)
T ss_pred HHHHHHHHHHHHh-cCCCCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHHCCCC
Confidence 4444444433222 2223344555443322 2467889999999999887654
No 38
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=41.30 E-value=10 Score=29.42 Aligned_cols=21 Identities=19% Similarity=0.222 Sum_probs=17.6
Q ss_pred cCCCccccchHHHHHHHHhcC
Q 040755 93 GHISGAHFNPAVTITFAIFRH 113 (275)
Q Consensus 93 g~iSG~h~NPavTl~~~l~g~ 113 (275)
..-|+||+||.+.++..+..+
T Consensus 5 ~~Gt~Ghv~P~lala~~L~~r 25 (139)
T PF03033_consen 5 TGGTRGHVYPFLALARALRRR 25 (139)
T ss_dssp EESSHHHHHHHHHHHHHHHHT
T ss_pred EcCChhHHHHHHHHHHHHhcc
Confidence 345789999999999999764
No 39
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=37.58 E-value=8.9 Score=35.61 Aligned_cols=22 Identities=23% Similarity=0.224 Sum_probs=18.9
Q ss_pred HhcCCCccccchHHHHHHHHhc
Q 040755 91 SVGHISGAHFNPAVTITFAIFR 112 (275)
Q Consensus 91 ~~g~iSG~h~NPavTl~~~l~g 112 (275)
+.+.-+|||+.||+.++-.+..
T Consensus 6 ~~~GGTGGHi~Pala~a~~l~~ 27 (352)
T PRK12446 6 FTGGGSAGHVTPNLAIIPYLKE 27 (352)
T ss_pred EEcCCcHHHHHHHHHHHHHHHh
Confidence 4567789999999999998874
No 40
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=30.70 E-value=60 Score=31.72 Aligned_cols=29 Identities=21% Similarity=0.532 Sum_probs=24.7
Q ss_pred CceeeeeecchHHHHHHHHHHHHHhcCCC
Q 040755 228 KGLWVYIAGPIIGTILGGLAYNMIRFTDK 256 (275)
Q Consensus 228 ~~~wvy~v~p~~Ga~~a~~l~~~~~~~~~ 256 (275)
.|.|.|++.+++|.+++.++.-+...+++
T Consensus 186 ~Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 186 WWRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred ceEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 38899999999999999998887766554
No 41
>PRK10631 p-hydroxybenzoic acid efflux subunit AaeB; Provisional
Probab=22.27 E-value=8.5e+02 Score=24.91 Aligned_cols=46 Identities=22% Similarity=0.176 Sum_probs=34.7
Q ss_pred ccccchHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhh
Q 040755 97 GAHFNPAVTITFAIFRHFPRKQVPIYIVAQLLGSVLASGSLYLIFD 142 (275)
Q Consensus 97 G~h~NPavTl~~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~ 142 (275)
++-+..+|..+.+..-..|..-..-+..++++|..+|.++...+++
T Consensus 380 ~a~~~aAV~~~LfA~~~nP~~~~~~fl~Gtl~a~~~a~l~~f~vLP 425 (652)
T PRK10631 380 GAMVMIAVVTSLAMRLPNPRMVAIDFLYGTLAALPLGALYFMVIIP 425 (652)
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3566777777766666666555677888999999999988888775
No 42
>PF08089 Toxin_20: Huwentoxin-II family; InterPro: IPR012625 This family consists of the huwentoxin-II (HWTX-II) family of toxins secreted by spiders. These toxins are found in venom that secreted from the bird spider Selenocosmia huwena Wang. The HWTX-II adopts a novel scaffold different from the ICK motif that is found in other huwentoxins. HWTX-II consists of 37 amino acids residues including six cysteines involved in three disulphide bridges [].; GO: 0005576 extracellular region; PDB: 2KGH_A 1I25_A.
Probab=20.90 E-value=54 Score=20.09 Aligned_cols=18 Identities=28% Similarity=0.813 Sum_probs=10.3
Q ss_pred cccCCCCCcCCCCCcccc
Q 040755 8 QVEEGNEPCTTPASTKCS 25 (275)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~ 25 (275)
++|.+-.||.+..+++|+
T Consensus 9 dIeKeGkpckp~g~kkC~ 26 (39)
T PF08089_consen 9 DIEKEGKPCKPKGEKKCK 26 (39)
T ss_dssp STTCSSSEEB-SS-SS--
T ss_pred EEeccCCcCCCccccccc
Confidence 344455899999999885
Done!