Query 040755
Match_columns 275
No_of_seqs 183 out of 1399
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 18:36:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040755.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040755hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2w2e_A AQY1, aquaporin, aquapo 100.0 3.6E-51 1.2E-55 365.3 22.1 225 35-261 38-273 (279)
2 3iyz_A Aquaporin-4; water tran 100.0 2.3E-51 8E-56 372.0 21.2 237 20-256 30-273 (340)
3 2zz9_A Aquaporin-4; water tran 100.0 7.6E-50 2.6E-54 359.1 20.2 220 36-255 7-233 (301)
4 3gd8_A Aquaporin-4; proton exc 100.0 5E-50 1.7E-54 347.8 17.2 214 40-253 2-222 (223)
5 3llq_A Aquaporin Z 2; aquapori 100.0 9.2E-50 3.1E-54 351.4 17.9 216 36-252 24-253 (256)
6 1j4n_A Aquaporin 1; membrane p 100.0 1.1E-49 3.7E-54 354.9 17.9 222 35-256 4-237 (271)
7 2b6o_A Aquaporin-0, lens fiber 100.0 6.1E-49 2.1E-53 348.7 21.9 220 35-255 3-226 (263)
8 2o9g_A Aquaporin Z; integral m 100.0 2E-49 6.9E-54 346.5 18.2 213 41-254 4-232 (234)
9 3cn5_A Aquaporin; membrane pro 100.0 1.1E-49 3.7E-54 358.9 16.8 221 34-254 53-289 (304)
10 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 3.4E-49 1.2E-53 350.5 16.6 218 37-255 7-229 (266)
11 1ldf_A Glycerol uptake facilit 100.0 5.4E-49 1.9E-53 352.4 16.7 219 39-257 5-260 (281)
12 3c02_A Aquaglyceroporin; membr 100.0 5.8E-49 2E-53 348.2 12.1 221 39-259 7-249 (258)
13 2f2b_A Aquaporin AQPM; protein 100.0 1.9E-47 6.5E-52 336.6 18.9 214 40-253 3-245 (246)
14 2f2b_A Aquaporin AQPM; protein 99.6 5.9E-15 2E-19 129.4 10.4 99 39-141 141-244 (246)
15 2b6o_A Aquaporin-0, lens fiber 99.5 2.4E-14 8.2E-19 126.6 7.8 100 156-255 8-111 (263)
16 3llq_A Aquaporin Z 2; aquapori 99.4 2.2E-13 7.4E-18 119.7 6.0 99 155-253 27-132 (256)
17 2zz9_A Aquaporin-4; water tran 99.4 5.5E-13 1.9E-17 119.6 7.7 99 156-254 11-117 (301)
18 2o9g_A Aquaporin Z; integral m 99.3 2E-12 6.9E-17 112.4 8.5 99 39-142 132-231 (234)
19 3gd8_A Aquaporin-4; proton exc 99.3 7.3E-13 2.5E-17 114.4 5.3 98 157-254 3-108 (223)
20 1j4n_A Aquaporin 1; membrane p 99.3 7.8E-13 2.7E-17 117.4 5.5 98 156-253 9-119 (271)
21 2w2e_A AQY1, aquaporin, aquapo 99.3 8.8E-12 3E-16 110.9 11.5 100 39-142 166-265 (279)
22 1ldf_A Glycerol uptake facilit 99.3 1.1E-12 3.7E-17 117.1 5.3 99 156-254 6-110 (281)
23 3c02_A Aquaglyceroporin; membr 99.3 1.6E-12 5.6E-17 114.5 6.0 99 156-254 8-112 (258)
24 3cn5_A Aquaporin; membrane pro 99.3 1.4E-12 4.7E-17 117.2 5.6 99 156-254 59-166 (304)
25 3d9s_A Aquaporin-5, AQP-5; aqu 99.3 1E-11 3.4E-16 109.8 10.6 101 39-143 127-228 (266)
26 3iyz_A Aquaporin-4; water tran 99.3 1.5E-11 5.2E-16 111.4 11.1 100 39-142 171-270 (340)
27 3kcu_A Probable formate transp 88.5 12 0.00041 32.6 14.8 99 77-178 71-182 (285)
28 3tds_E Formate/nitrite transpo 77.2 4.8 0.00016 34.9 6.4 100 77-178 67-177 (268)
29 3kly_A Putative formate transp 76.0 12 0.00039 32.7 8.6 98 77-178 70-181 (280)
30 4fc4_A Nitrite transporter NIR 70.1 6.5 0.00022 33.9 5.4 100 77-178 61-171 (261)
31 3s2u_A UDP-N-acetylglucosamine 46.6 2.6 9E-05 37.6 -1.3 22 92-113 8-29 (365)
32 2kgh_A Venom peptide 2; insect 41.7 12 0.00041 21.9 1.5 17 9-25 10-26 (39)
No 1
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=3.6e-51 Score=365.26 Aligned_cols=225 Identities=22% Similarity=0.381 Sum_probs=192.2
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHhhhhhc-ccc------cC-CCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHH
Q 040755 35 PSPVLQLLQKAIAEVIGTYFLIFTGCGSVAV-NKI------YG-SVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTI 106 (275)
Q Consensus 35 ~~~~~~~~~~~~~EfigTf~lv~~~~~~~~~-~~~------~~-~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl 106 (275)
+...++.+|++++||+|||+|+++++++... +.. .+ ..+++.++++||+++++.+++++++||||+|||||+
T Consensus 38 ~~~~~~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTl 117 (279)
T 2w2e_A 38 SDSVRNHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTL 117 (279)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHH
Confidence 3444678899999999999999999886422 211 11 234667899999999999999999999999999999
Q ss_pred HHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcCCcccccccC--CCCchhHHHHHHHHHHHHHHHhhhhcccCCC
Q 040755 107 TFAIFRHFPRKQVPIYIVAQLLGSVLASGSLYLIFDVKDEAFFGTIP--VGTNVQSFVLEIIISFLLMFVISGVATDNRS 184 (275)
Q Consensus 107 ~~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~p--~~s~~~~~~~E~~~T~ilv~~i~~~~~~~~~ 184 (275)
++++.|+++|.+++.|+++|++|+++|+++++.++++.. ...+.| ..+..++++.|+++|++|+++++.+.++++.
T Consensus 118 a~~~~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~--~~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~ 195 (279)
T 2w2e_A 118 ALVLARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEI--AFANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHR 195 (279)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSSC--CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCST
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccc--eeeccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999999999999999986543 223444 3478899999999999999999998766655
Q ss_pred CCchhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHhcc-CceeeeeecchHHHHHHHHHHHHHhcCCCCcccc
Q 040755 185 IGELAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMHQY-KGLWVYIAGPIIGTILGGLAYNMIRFTDKPLREI 261 (275)
Q Consensus 185 ~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~-~~~wvy~v~p~~Ga~~a~~l~~~~~~~~~~~~~~ 261 (275)
...+.|+.||+++.+.+++.++.||+++|||||||||++.+.| .++||||++|++|+++|+++|+++...+++..++
T Consensus 196 ~~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~~~WVy~vgPiiGa~la~~ly~~l~~~~~~~~~p 273 (279)
T 2w2e_A 196 ATWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQMWKWLNYQTTNP 273 (279)
T ss_dssp TGGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCSCC
T ss_pred CcCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHccCCCcCCC
Confidence 5568999999999999999999999999999999999999765 5899999999999999999999998776654433
No 2
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=2.3e-51 Score=372.02 Aligned_cols=237 Identities=31% Similarity=0.477 Sum_probs=196.8
Q ss_pred CCccccccccccCCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhcccc--cC-CCCchhHHHHHHHHHHHHHHHhcCCC
Q 040755 20 ASTKCSKISDARNSSPSPVLQLLQKAIAEVIGTYFLIFTGCGSVAVNKI--YG-SVTFPGICVVWGLIVMVMIYSVGHIS 96 (275)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~EfigTf~lv~~~~~~~~~~~~--~~-~~~~~~~a~~~g~~v~~~i~~~g~iS 96 (275)
+.+.+++.+.....++....+++|++++||+|||+|+++++++++.... .. ..+++.++++||+++++.+++++++|
T Consensus 30 ~~~~ps~~~~~~~~~~~~~~~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~IS 109 (340)
T 3iyz_A 30 DDKDPSSRSIMVAFKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHIS 109 (340)
T ss_pred CCCCCcchhhhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccC
Confidence 3344433333333444555789999999999999999999998874321 11 45677899999999999999999999
Q ss_pred ccccchHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcCCccccc---ccCCCCchhHHHHHHHHHHHHHH
Q 040755 97 GAHFNPAVTITFAIFRHFPRKQVPIYIVAQLLGSVLASGSLYLIFDVKDEAFFG---TIPVGTNVQSFVLEIIISFLLMF 173 (275)
Q Consensus 97 G~h~NPavTl~~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~---~~p~~s~~~~~~~E~~~T~ilv~ 173 (275)
|||+|||||+++++.|+++|.+++.|+++|++||++|+++++.+++.......+ +.+..+..++|+.|+++||+|++
T Consensus 110 GAHlNPAVTlal~l~G~~~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~ 189 (340)
T 3iyz_A 110 GGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVF 189 (340)
T ss_pred cCeeChHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcCceeeccCCCccCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988643322222 23445788999999999999999
Q ss_pred HhhhhcccCCC-CCchhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHhccCceeeeeecchHHHHHHHHHHHHHh
Q 040755 174 VISGVATDNRS-IGELAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMHQYKGLWVYIAGPIIGTILGGLAYNMIR 252 (275)
Q Consensus 174 ~i~~~~~~~~~-~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~~a~~l~~~~~ 252 (275)
+++.+.++++. .....|+.||+++.+.+..++++||+++||||+||||++.++|.++||||+||++|+++|+++|++++
T Consensus 190 ~Ila~~d~~~~~~~~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~~w~~~WVywvgPiiGailaallY~~l~ 269 (340)
T 3iyz_A 190 TIFASCDDKRTDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVF 269 (340)
T ss_pred HHHHhhcCccCCcccchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHccCCCcEeehhHHHHHHHHHHHHHHHHHh
Confidence 99998644443 23567999999998888888899999999999999999999999999999999999999999999997
Q ss_pred cCCC
Q 040755 253 FTDK 256 (275)
Q Consensus 253 ~~~~ 256 (275)
.++.
T Consensus 270 ~p~~ 273 (340)
T 3iyz_A 270 CPDV 273 (340)
T ss_pred CCCh
Confidence 6543
No 3
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=7.6e-50 Score=359.13 Aligned_cols=220 Identities=33% Similarity=0.537 Sum_probs=187.5
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHhhhhhccccc--C-CCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhc
Q 040755 36 SPVLQLLQKAIAEVIGTYFLIFTGCGSVAVNKIY--G-SVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFR 112 (275)
Q Consensus 36 ~~~~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~--~-~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g 112 (275)
..+.+++|++++||+|||+|+++++++.+..... . ..+++.++++||+++++.+++++++||||+|||||+++++.|
T Consensus 7 ~~~~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g 86 (301)
T 2zz9_A 7 VWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTR 86 (301)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTS
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhc
Confidence 3457899999999999999999999987643321 1 445678899999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHhhcCCccccc-c--cCCCCchhHHHHHHHHHHHHHHHhhhhcccCCC-CCch
Q 040755 113 HFPRKQVPIYIVAQLLGSVLASGSLYLIFDVKDEAFFG-T--IPVGTNVQSFVLEIIISFLLMFVISGVATDNRS-IGEL 188 (275)
Q Consensus 113 ~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~-~--~p~~s~~~~~~~E~~~T~ilv~~i~~~~~~~~~-~~~~ 188 (275)
+++|.+++.|+++|++||++|+++++.+++.......+ + .+..+..++++.|+++||+|+++++.+.++++. ....
T Consensus 87 ~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~d~~~~~~~~~ 166 (301)
T 2zz9_A 87 KISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGS 166 (301)
T ss_dssp SSCTTTTHHHHHHHHHHHHHHHHHHHTTSCSCGGGTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHSCSSSSCCSSC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCceeeecCCcccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCccch
Confidence 99999999999999999999999999988643221111 1 234478899999999999999999997644443 2457
Q ss_pred hHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHhccCceeeeeecchHHHHHHHHHHHHHhcCC
Q 040755 189 AGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMHQYKGLWVYIAGPIIGTILGGLAYNMIRFTD 255 (275)
Q Consensus 189 ~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~~a~~l~~~~~~~~ 255 (275)
.|+.||+++.+.+..++++||+++||||+||||++.++|.++|+||++|++|+++|+++|++++.++
T Consensus 167 ~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~~w~~~WVy~vgPiiGailaa~ly~~l~~~~ 233 (301)
T 2zz9_A 167 VALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPD 233 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCTTTTHHHHHHHHHHHHHHHHHHTTTC--
T ss_pred HhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhCCCcceeeeeeHHHHHHHHHHHHHHHHhCCc
Confidence 8999999998888888889999999999999999999999999999999999999999999887543
No 4
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=5e-50 Score=347.85 Aligned_cols=214 Identities=32% Similarity=0.523 Sum_probs=185.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccc--cC-CCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCCC
Q 040755 40 QLLQKAIAEVIGTYFLIFTGCGSVAVNKI--YG-SVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFPR 116 (275)
Q Consensus 40 ~~~~~~~~EfigTf~lv~~~~~~~~~~~~--~~-~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~~ 116 (275)
+++|++++||+|||+|+++++++.+.... +. ..++..++++||+++++.+++++++||||+|||||++.++.|+++|
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~ 81 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 81 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCH
Confidence 47899999999999999999998764321 11 4567889999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHhhcCCcc---cccccCCCCchhHHHHHHHHHHHHHHHhhhhcccCCC-CCchhHHH
Q 040755 117 KQVPIYIVAQLLGSVLASGSLYLIFDVKDEA---FFGTIPVGTNVQSFVLEIIISFLLMFVISGVATDNRS-IGELAGIA 192 (275)
Q Consensus 117 ~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~---~~~~~p~~s~~~~~~~E~~~T~ilv~~i~~~~~~~~~-~~~~~~~~ 192 (275)
.+++.|+++|++|+++|+.+++.++++.... ...+.|..+..++++.|+++|++|+++++.+.++++. .....|+.
T Consensus 82 ~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~~~pl~ 161 (223)
T 3gd8_A 82 AKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIALA 161 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHTCTTCSCCCSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHhccccCCccCCccHH
Confidence 9999999999999999999999988643211 1223345578899999999999999999997644443 24567999
Q ss_pred HHHHHHHHHHHhcCCCCcccchhhhHHHHHhHhccCceeeeeecchHHHHHHHHHHHHHhc
Q 040755 193 IGMTILLNVLVAGPVSGASMNPARSLGPAIVMHQYKGLWVYIAGPIIGTILGGLAYNMIRF 253 (275)
Q Consensus 193 ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~~a~~l~~~~~~ 253 (275)
||+++.+.+...++.||+++|||||||||++.++|+++|+||++|++|+++|+++|++++.
T Consensus 162 iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~~w~~~Wvy~vgP~~Ga~la~~~y~~~~~ 222 (223)
T 3gd8_A 162 IGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFC 222 (223)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhccCCccccccHHHHHHHHHHhcCCCcEEeehhHHHHHHHHHHHHHHHHcC
Confidence 9999987777777899999999999999999999999999999999999999999998764
No 5
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=9.2e-50 Score=351.38 Aligned_cols=216 Identities=33% Similarity=0.631 Sum_probs=184.9
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHhhhhhcccc-cC-CCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcC
Q 040755 36 SPVLQLLQKAIAEVIGTYFLIFTGCGSVAVNKI-YG-SVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRH 113 (275)
Q Consensus 36 ~~~~~~~~~~~~EfigTf~lv~~~~~~~~~~~~-~~-~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~ 113 (275)
+..++++|++++||+|||+|+++++++.+.+.. ++ ..+++.++++||+++++.+++++++||||+|||||+++++.|+
T Consensus 24 ~~~~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~ 103 (256)
T 3llq_A 24 FQSYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGR 103 (256)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcC
Confidence 445678999999999999999999998764432 22 4567889999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHhhcCCc---------ccccccCC-CCchhHHHHHHHHHHHHHHHhhhhcccCC
Q 040755 114 FPRKQVPIYIVAQLLGSVLASGSLYLIFDVKDE---------AFFGTIPV-GTNVQSFVLEIIISFLLMFVISGVATDNR 183 (275)
Q Consensus 114 ~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~---------~~~~~~p~-~s~~~~~~~E~~~T~ilv~~i~~~~~~~~ 183 (275)
++|.+++.|+++|++|+++|+++++.++++... ....+.|. .+..++++.|+++|++|+++++.+. |++
T Consensus 104 ~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~~~-d~~ 182 (256)
T 3llq_A 104 FPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGST-HGR 182 (256)
T ss_dssp SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHH-STT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHHhc-CCC
Confidence 999999999999999999999999998853210 12234554 3778999999999999999999864 555
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHhc--cCceeeeeecchHHHHHHHHHHHHHh
Q 040755 184 SIGELAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMHQ--YKGLWVYIAGPIIGTILGGLAYNMIR 252 (275)
Q Consensus 184 ~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~--~~~~wvy~v~p~~Ga~~a~~l~~~~~ 252 (275)
....+.|+.||+++.+..++.++.||+++|||||||||++.++ |+++||||++|++|+++|+++|+++.
T Consensus 183 ~~~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 183 VPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCCCcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 5556889999999999999999999999999999999999764 56899999999999999999999885
No 6
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=1.1e-49 Score=354.92 Aligned_cols=222 Identities=28% Similarity=0.461 Sum_probs=189.6
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHhhhhhccc----cc---C-CCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHH
Q 040755 35 PSPVLQLLQKAIAEVIGTYFLIFTGCGSVAVNK----IY---G-SVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTI 106 (275)
Q Consensus 35 ~~~~~~~~~~~~~EfigTf~lv~~~~~~~~~~~----~~---~-~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl 106 (275)
+..+.+++|++++||+||++|+++++++.+... .+ + ..+++.++++||+++++.+++++++||||+|||||+
T Consensus 4 e~~~~~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTl 83 (271)
T 1j4n_A 4 EFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTL 83 (271)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHH
Confidence 344567999999999999999999998876422 11 1 235678999999999999999999999999999999
Q ss_pred HHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcCCcccc---cccCCCCchhHHHHHHHHHHHHHHHhhhhcccCC
Q 040755 107 TFAIFRHFPRKQVPIYIVAQLLGSVLASGSLYLIFDVKDEAFF---GTIPVGTNVQSFVLEIIISFLLMFVISGVATDNR 183 (275)
Q Consensus 107 ~~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~---~~~p~~s~~~~~~~E~~~T~ilv~~i~~~~~~~~ 183 (275)
++++.|+++|.+++.|+++|++|+++|+++++.++++...... .+.|..+..++++.|+++|++|+++++.+.++++
T Consensus 84 a~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~~d~~~ 163 (271)
T 1j4n_A 84 GLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR 163 (271)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTCCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHTCSSC
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhccccC
Confidence 9999999999999999999999999999999999864332222 2345557789999999999999999999754333
Q ss_pred C-CCchhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHhccCceeeeeecchHHHHHHHHHHHHHhcCCC
Q 040755 184 S-IGELAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMHQYKGLWVYIAGPIIGTILGGLAYNMIRFTDK 256 (275)
Q Consensus 184 ~-~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~~a~~l~~~~~~~~~ 256 (275)
. .....|+.||+++.+.+..++++||+++||||||||+++.++|+++|+||++|++|+++|+++|++++.++.
T Consensus 164 ~~~~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~~~~~~wv~~vgP~~Ga~la~~~y~~~~~~~~ 237 (271)
T 1j4n_A 164 RDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAPRS 237 (271)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTTCCTTTTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred CCccccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhCCCcceeHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 2 246789999999998888878899999999999999999999999999999999999999999999876544
No 7
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=6.1e-49 Score=348.69 Aligned_cols=220 Identities=30% Similarity=0.503 Sum_probs=189.9
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCC
Q 040755 35 PSPVLQLLQKAIAEVIGTYFLIFTGCGSVAVNKIYGSVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHF 114 (275)
Q Consensus 35 ~~~~~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~ 114 (275)
+..+.+++|++++||+|||+|+++++++.... .....+++.+++++|+++++.+++++++||||+|||||+++++.|++
T Consensus 3 e~~~~~~~~~~laEfiGT~~Lv~~g~g~~~~~-~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~~ 81 (263)
T 2b6o_A 3 ELRSASFWRAIFAEFFATLFYVFFGLGASLRW-APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQM 81 (263)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHSCC-CSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTCS
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcCC
Confidence 34557799999999999999999999987542 22234567789999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHhhcCCccccc---ccCCCCchhHHHHHHHHHHHHHHHhhhhcccCC-CCCchhH
Q 040755 115 PRKQVPIYIVAQLLGSVLASGSLYLIFDVKDEAFFG---TIPVGTNVQSFVLEIIISFLLMFVISGVATDNR-SIGELAG 190 (275)
Q Consensus 115 ~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~---~~p~~s~~~~~~~E~~~T~ilv~~i~~~~~~~~-~~~~~~~ 190 (275)
+|.+++.|+++|++|+++|+++++.++++......+ +.|..+..++++.|+++|++|+++++.+.++++ ......|
T Consensus 82 ~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~~~~p 161 (263)
T 2b6o_A 82 SLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVA 161 (263)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCSSCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTSCSSCCCHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccHH
Confidence 999999999999999999999999998653322222 335557889999999999999999999853333 2346789
Q ss_pred HHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHhccCceeeeeecchHHHHHHHHHHHHHhcCC
Q 040755 191 IAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMHQYKGLWVYIAGPIIGTILGGLAYNMIRFTD 255 (275)
Q Consensus 191 ~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~~wvy~v~p~~Ga~~a~~l~~~~~~~~ 255 (275)
+.||+++.+.+++.+++||+++|||||||||++.++|+++|+||++|++|+++|+++|++++.++
T Consensus 162 l~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~ 226 (263)
T 2b6o_A 162 LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFPR 226 (263)
T ss_dssp HHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHTCCTTCTHHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred HHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcCCccceeHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999887654
No 8
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=2e-49 Score=346.50 Aligned_cols=213 Identities=37% Similarity=0.627 Sum_probs=186.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccccc--CCCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCCCCc
Q 040755 41 LLQKAIAEVIGTYFLIFTGCGSVAVNKIY--GSVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFPRKQ 118 (275)
Q Consensus 41 ~~~~~~~EfigTf~lv~~~~~~~~~~~~~--~~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~~~~ 118 (275)
++|++++||+|||+|+++++++...+... ...+++.++++||+++++.+++++++||||+|||||++.++.|+++|++
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 83 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKE 83 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCHHH
Confidence 68999999999999999999987654432 1346778999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCCc-----------ccccccCC-CCchhHHHHHHHHHHHHHHHhhhhcccCCCCC
Q 040755 119 VPIYIVAQLLGSVLASGSLYLIFDVKDE-----------AFFGTIPV-GTNVQSFVLEIIISFLLMFVISGVATDNRSIG 186 (275)
Q Consensus 119 ~~~yi~aQ~lGa~~g~~l~~~~~~~~~~-----------~~~~~~p~-~s~~~~~~~E~~~T~ilv~~i~~~~~~~~~~~ 186 (275)
++.|+++|++|+++|+++++.++++... ....+.|. .+..++++.|+++|++|+++++.+. |++...
T Consensus 84 ~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~~~-d~~~~~ 162 (234)
T 2o9g_A 84 VVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGAT-DKFAPA 162 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHT-STTSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHHhc-CCCCcc
Confidence 9999999999999999999999864321 12234554 3778999999999999999999975 555555
Q ss_pred chhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHhc--cCceeeeeecchHHHHHHHHHHHHHhcC
Q 040755 187 ELAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMHQ--YKGLWVYIAGPIIGTILGGLAYNMIRFT 254 (275)
Q Consensus 187 ~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~--~~~~wvy~v~p~~Ga~~a~~l~~~~~~~ 254 (275)
...|+.||+++.+.++..+++||+++|||||||||++.++ |+++|+||++|++|+++|+++|++++.+
T Consensus 163 ~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 163 GFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred chHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCCceeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 6899999999999999999999999999999999999875 5599999999999999999999998753
No 9
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=1.1e-49 Score=358.86 Aligned_cols=221 Identities=26% Similarity=0.463 Sum_probs=188.0
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhcccc----cCCCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHH
Q 040755 34 SPSPVLQLLQKAIAEVIGTYFLIFTGCGSVAVNKI----YGSVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFA 109 (275)
Q Consensus 34 ~~~~~~~~~~~~~~EfigTf~lv~~~~~~~~~~~~----~~~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~ 109 (275)
++..+.+++|++++||+|||+|+++++++.+.... ....+++.++++||+++++.+++++++||||+|||||++++
T Consensus 53 ~e~~~~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~ 132 (304)
T 3cn5_A 53 GELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLF 132 (304)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHH
Confidence 45566889999999999999999999988764321 12456778999999999999999999999999999999999
Q ss_pred HhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcCCccc----ccccCCCCchhHHHHHHHHHHHHHHHhhhhcccCCCC
Q 040755 110 IFRHFPRKQVPIYIVAQLLGSVLASGSLYLIFDVKDEAF----FGTIPVGTNVQSFVLEIIISFLLMFVISGVATDNRSI 185 (275)
Q Consensus 110 l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~----~~~~p~~s~~~~~~~E~~~T~ilv~~i~~~~~~~~~~ 185 (275)
+.|+++|.+++.|+++|++|+++|+++++.++++..... ....+..+..++++.|+++||+|+++++.+.++++..
T Consensus 133 l~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~~~d~~~~~ 212 (304)
T 3cn5_A 133 LARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTALGAEIIGTFVLVYTVFSATDPKRSA 212 (304)
T ss_dssp HTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHTTTTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTEEEEEES
T ss_pred HhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcccccCCCccHHHHHHHHHHHHHHHHHHHhheecCccCC
Confidence 999999999999999999999999999999886431111 1112345788999999999999999999764333322
Q ss_pred -Cc----hhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHh---HhccCceeeeeecchHHHHHHHHHHHHHhcC
Q 040755 186 -GE----LAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIV---MHQYKGLWVYIAGPIIGTILGGLAYNMIRFT 254 (275)
Q Consensus 186 -~~----~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~---~~~~~~~wvy~v~p~~Ga~~a~~l~~~~~~~ 254 (275)
+. +.|+.||+++++.+++.+++||+++|||||||||++ .++|+++|+||++|++|+++|+++|++++.+
T Consensus 213 ~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~ 289 (304)
T 3cn5_A 213 RDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRA 289 (304)
T ss_dssp TTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred CCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhCC
Confidence 22 789999999999999999999999999999999999 6789999999999999999999999988754
No 10
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-49 Score=350.49 Aligned_cols=218 Identities=29% Similarity=0.522 Sum_probs=188.3
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCCC
Q 040755 37 PVLQLLQKAIAEVIGTYFLIFTGCGSVAVNKIYGSVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFPR 116 (275)
Q Consensus 37 ~~~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~~ 116 (275)
.+.+++|++++||+|||+|+++++++.... .....+++.++++||+++++.+++++++||||+|||||+++++.|+++|
T Consensus 7 ~~~~~~r~~laEfiGT~~lv~~g~g~~~~~-~~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~ 85 (266)
T 3d9s_A 7 CSVAFLKAVFAEFLATLIFVFFGLGSALKW-PSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISL 85 (266)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHHSCC-SSSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSSSCH
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcCCCH
Confidence 346789999999999999999999987532 2224567789999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHhhcCCccccc-cc--CCCCchhHHHHHHHHHHHHHHHhhhhcccCCC-CCchhHHH
Q 040755 117 KQVPIYIVAQLLGSVLASGSLYLIFDVKDEAFFG-TI--PVGTNVQSFVLEIIISFLLMFVISGVATDNRS-IGELAGIA 192 (275)
Q Consensus 117 ~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~-~~--p~~s~~~~~~~E~~~T~ilv~~i~~~~~~~~~-~~~~~~~~ 192 (275)
.+++.|+++|++|+++|+++++.++++......+ +. +..+..++++.|+++|++|+++++.+.++++. .....|+.
T Consensus 86 ~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~~~~pl~ 165 (266)
T 3d9s_A 86 LRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALS 165 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCTTCCSCCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccccccCceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCccchHHHH
Confidence 9999999999999999999999998643221222 22 34478899999999999999999998533332 24578999
Q ss_pred HHHHHHHHHHHhcCCCCcccchhhhHHHHHhHhccCc-eeeeeecchHHHHHHHHHHHHHhcCC
Q 040755 193 IGMTILLNVLVAGPVSGASMNPARSLGPAIVMHQYKG-LWVYIAGPIIGTILGGLAYNMIRFTD 255 (275)
Q Consensus 193 ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~~~~~-~wvy~v~p~~Ga~~a~~l~~~~~~~~ 255 (275)
||+++.+.+..++++||+++||||||||+++.++|.+ +||||++|++|+++|+++|++++.++
T Consensus 166 IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~ 229 (266)
T 3d9s_A 166 IGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPN 229 (266)
T ss_dssp HHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHTCCCTTHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHhhccccccccHHHHHHHHHHcCCcccCEeeeehHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999998 99999999999999999999987653
No 11
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=5.4e-49 Score=352.42 Aligned_cols=219 Identities=37% Similarity=0.573 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcccccC-CCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCCCC
Q 040755 39 LQLLQKAIAEVIGTYFLIFTGCGSVAVNKIYG-SVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFPRK 117 (275)
Q Consensus 39 ~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~-~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~~~ 117 (275)
++++|++++||+|||+|+++++++.+.....+ ..+...++++||+++++.+++++++||||+|||||++.++.|+++|.
T Consensus 5 ~~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 84 (281)
T 1ldf_A 5 STLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKR 84 (281)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCHH
Confidence 45889999999999999999998775433222 23444589999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhcCC-------------------cccccccCC--CCchhHHHHHHHHHHHHHHHhh
Q 040755 118 QVPIYIVAQLLGSVLASGSLYLIFDVKD-------------------EAFFGTIPV--GTNVQSFVLEIIISFLLMFVIS 176 (275)
Q Consensus 118 ~~~~yi~aQ~lGa~~g~~l~~~~~~~~~-------------------~~~~~~~p~--~s~~~~~~~E~~~T~ilv~~i~ 176 (275)
+++.|+++|++|+++|+++++.++++.. ...+++.|. .+..++++.|+++|++|+++++
T Consensus 85 ~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf~Lv~~il 164 (281)
T 1ldf_A 85 KVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLIL 164 (281)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999885321 012345554 3788999999999999999999
Q ss_pred hhcccCCCC--CchhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHh-------ccC------ceeeeeecchHHH
Q 040755 177 GVATDNRSI--GELAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMH-------QYK------GLWVYIAGPIIGT 241 (275)
Q Consensus 177 ~~~~~~~~~--~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-------~~~------~~wvy~v~p~~Ga 241 (275)
.+.++++.. ..+.|+.||+++.+.++..+++||+++|||||||||++.. .|. ++||||++|++|+
T Consensus 165 ~~~d~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy~vgPi~Ga 244 (281)
T 1ldf_A 165 ALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGA 244 (281)
T ss_dssp HHHCTTSSSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHHHHHHHHHH
T ss_pred HHhccCCCCcccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceeeHHhHHHHHHH
Confidence 986444332 4588999999999999999999999999999999999862 222 7999999999999
Q ss_pred HHHHHHHHHHhcCCCC
Q 040755 242 ILGGLAYNMIRFTDKP 257 (275)
Q Consensus 242 ~~a~~l~~~~~~~~~~ 257 (275)
++|+++|++++.++.|
T Consensus 245 ~la~~~y~~l~~~~~~ 260 (281)
T 1ldf_A 245 IVGAFAYRKLIGRHLP 260 (281)
T ss_dssp HHHHHHHHHHTGGGC-
T ss_pred HHHHHHHHHHhCccCC
Confidence 9999999999866554
No 12
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=5.8e-49 Score=348.24 Aligned_cols=221 Identities=28% Similarity=0.457 Sum_probs=184.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcccccC-CCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCCCC
Q 040755 39 LQLLQKAIAEVIGTYFLIFTGCGSVAVNKIYG-SVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFPRK 117 (275)
Q Consensus 39 ~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~-~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~~~ 117 (275)
++++|++++||+|||+|+++++++.......+ ..+++.++++||+++++.+++++++||||+|||||++.++.|+++|.
T Consensus 7 ~~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~ 86 (258)
T 3c02_A 7 KSYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLK 86 (258)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHH
Confidence 45889999999999999999998775432222 45677899999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhcCCcc--------cccccCCCCchhHHHHHHHHHHHHHHHhhhhcccCC--CCCc
Q 040755 118 QVPIYIVAQLLGSVLASGSLYLIFDVKDEA--------FFGTIPVGTNVQSFVLEIIISFLLMFVISGVATDNR--SIGE 187 (275)
Q Consensus 118 ~~~~yi~aQ~lGa~~g~~l~~~~~~~~~~~--------~~~~~p~~s~~~~~~~E~~~T~ilv~~i~~~~~~~~--~~~~ 187 (275)
+++.|+++|++|+++|+++++.++++..+. ..+.....+..++++.|+++|++|+++++.+.++++ ....
T Consensus 87 ~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~d~~~~~~~~~ 166 (258)
T 3c02_A 87 KIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVVVDENICGKFHI 166 (258)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCSCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhCcccCCcccc
Confidence 999999999999999999999998632110 011111223456999999999999999999753332 2345
Q ss_pred hh-HHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHh------cc----CceeeeeecchHHHHHHHHHHHHHhcCCC
Q 040755 188 LA-GIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMH------QY----KGLWVYIAGPIIGTILGGLAYNMIRFTDK 256 (275)
Q Consensus 188 ~~-~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~------~~----~~~wvy~v~p~~Ga~~a~~l~~~~~~~~~ 256 (275)
+. |+.||+++.+.+++.+++||+++|||||||||++.. .| +++||||++|++|+++|+++|++++.++.
T Consensus 167 ~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~~~~~~~ 246 (258)
T 3c02_A 167 LKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVICPLV 246 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred cHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHHHHHHhcccC
Confidence 77 999999999999999999999999999999999873 34 67999999999999999999999987655
Q ss_pred Ccc
Q 040755 257 PLR 259 (275)
Q Consensus 257 ~~~ 259 (275)
|.+
T Consensus 247 ~~~ 249 (258)
T 3c02_A 247 DLA 249 (258)
T ss_dssp HHC
T ss_pred CCc
Confidence 543
No 13
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=1.9e-47 Score=336.57 Aligned_cols=214 Identities=36% Similarity=0.618 Sum_probs=184.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccc--cc----------C------CCCchhHHHHHHHHHHHHHHHhcCCCccccc
Q 040755 40 QLLQKAIAEVIGTYFLIFTGCGSVAVNK--IY----------G------SVTFPGICVVWGLIVMVMIYSVGHISGAHFN 101 (275)
Q Consensus 40 ~~~~~~~~EfigTf~lv~~~~~~~~~~~--~~----------~------~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~N 101 (275)
+++|++++||+|||+|+++++++.+... .+ + ..+++.++++||+++++.+++++++||||+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 4789999999999999999998776432 10 1 1123448999999999999999999999999
Q ss_pred hHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcCC---cccccccC--CCCchhHHHHHHHHHHHHHHHhh
Q 040755 102 PAVTITFAIFRHFPRKQVPIYIVAQLLGSVLASGSLYLIFDVKD---EAFFGTIP--VGTNVQSFVLEIIISFLLMFVIS 176 (275)
Q Consensus 102 PavTl~~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~---~~~~~~~p--~~s~~~~~~~E~~~T~ilv~~i~ 176 (275)
||||++.++.|+++|++++.|+++|++|+++|+++++.+++++. .....+.| ..+..++++.|+++|++|+++++
T Consensus 83 PAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~ 162 (246)
T 2f2b_A 83 PAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIM 162 (246)
T ss_dssp HHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHheee
Confidence 99999999999999999999999999999999999999997521 23344555 34788999999999999999999
Q ss_pred hhcccCCCCCchhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHh--H----hccCceeeeeecchHHHHHHHHHHHH
Q 040755 177 GVATDNRSIGELAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIV--M----HQYKGLWVYIAGPIIGTILGGLAYNM 250 (275)
Q Consensus 177 ~~~~~~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~--~----~~~~~~wvy~v~p~~Ga~~a~~l~~~ 250 (275)
.+.+|++......|+.+|+++.+.+++.+++||+++||||||||+++ . ++|+++|+||++|++|+++|+++|++
T Consensus 163 ~~~~~~~~~~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y~~ 242 (246)
T 2f2b_A 163 GIAVDERAPKGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQY 242 (246)
T ss_dssp HHTTSTTSCTTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCCceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHHHHHHH
Confidence 97666665566789999999999999999999999999999999993 2 36888899999999999999999998
Q ss_pred Hhc
Q 040755 251 IRF 253 (275)
Q Consensus 251 ~~~ 253 (275)
+..
T Consensus 243 l~~ 245 (246)
T 2f2b_A 243 LTS 245 (246)
T ss_dssp HTC
T ss_pred HcC
Confidence 863
No 14
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.58 E-value=5.9e-15 Score=129.39 Aligned_cols=99 Identities=27% Similarity=0.368 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHH-----hcC
Q 040755 39 LQLLQKAIAEVIGTYFLIFTGCGSVAVNKIYGSVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAI-----FRH 113 (275)
Q Consensus 39 ~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l-----~g~ 113 (275)
.+..+.++.|+++||+|+++.++....++.. ....++.+|+.+....+..+++||+|+||||++++.+ .++
T Consensus 141 ~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~----~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~ 216 (246)
T 2f2b_A 141 ISYWQAMLAEVVGTFLLMITIMGIAVDERAP----KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGT 216 (246)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTTSTTSC----TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
T ss_pred cchHHHHHHHHHHHHHHHheeeEEecCCCCC----CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCC
Confidence 4578999999999999999988754322211 1235678899999999999999999999999999998 345
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHh
Q 040755 114 FPRKQVPIYIVAQLLGSVLASGSLYLIF 141 (275)
Q Consensus 114 ~~~~~~~~yi~aQ~lGa~~g~~l~~~~~ 141 (275)
..|.+.|+||++|++|+++|+++++.+.
T Consensus 217 ~~w~~~~vy~vap~~Ga~laa~~y~~l~ 244 (246)
T 2f2b_A 217 DLWNYYSIYVIGPIVGAVLAALTYQYLT 244 (246)
T ss_dssp CCGGGTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcceEEEeeeHHHHHHHHHHHHHHHHc
Confidence 6788888999999999999999888765
No 15
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.50 E-value=2.4e-14 Score=126.58 Aligned_cols=100 Identities=16% Similarity=0.251 Sum_probs=85.5
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhcccCC-CCCc--hhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHh-ccCcee
Q 040755 156 TNVQSFVLEIIISFLLMFVISGVATDNR-SIGE--LAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMH-QYKGLW 231 (275)
Q Consensus 156 s~~~~~~~E~~~T~ilv~~i~~~~~~~~-~~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~~~~~w 231 (275)
+..+.++.|+++|++|+++.+++....+ .... ..++.+|+++.+.+++.+.+||+|+|||++++.++.++ +|...|
T Consensus 8 ~~~~~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~~~~~~~~ 87 (263)
T 2b6o_A 8 SFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAI 87 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTCSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcCCCHHHHH
Confidence 4578999999999999999988764322 2122 25688999999999999999999999999999999876 789999
Q ss_pred eeeecchHHHHHHHHHHHHHhcCC
Q 040755 232 VYIAGPIIGTILGGLAYNMIRFTD 255 (275)
Q Consensus 232 vy~v~p~~Ga~~a~~l~~~~~~~~ 255 (275)
+||++|++|+++|+.+++.++.++
T Consensus 88 ~Yi~AQ~lGa~~ga~l~~~~~~~~ 111 (263)
T 2b6o_A 88 CYVVAQLLGAVAGAAVLYSVTPPA 111 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHcccc
Confidence 999999999999999999998643
No 16
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.40 E-value=2.2e-13 Score=119.68 Aligned_cols=99 Identities=24% Similarity=0.285 Sum_probs=82.5
Q ss_pred CCchhHHHHHHHHHHHHHHHhhhhccc-CC---CCCc--hhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHh-cc
Q 040755 155 GTNVQSFVLEIIISFLLMFVISGVATD-NR---SIGE--LAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMH-QY 227 (275)
Q Consensus 155 ~s~~~~~~~E~~~T~ilv~~i~~~~~~-~~---~~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~~ 227 (275)
.+..|.+++||++|++|+++.++.... .. .... ...+.+|+++++.+++.+.+||+++|||++++..+.++ +|
T Consensus 27 ~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~ 106 (256)
T 3llq_A 27 YVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFPA 106 (256)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCCCH
Confidence 467899999999999999998875421 11 1111 24588999999999999999999999999999999876 79
Q ss_pred CceeeeeecchHHHHHHHHHHHHHhc
Q 040755 228 KGLWVYIAGPIIGTILGGLAYNMIRF 253 (275)
Q Consensus 228 ~~~wvy~v~p~~Ga~~a~~l~~~~~~ 253 (275)
...+.|+++|++|+++|+.+.+.+++
T Consensus 107 ~~~~~YiiAQ~lGA~~ga~lv~~~~~ 132 (256)
T 3llq_A 107 SSLVPYVIAQVAGAIVAAAALYVIAT 132 (256)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999988874
No 17
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.38 E-value=5.5e-13 Score=119.63 Aligned_cols=99 Identities=17% Similarity=0.286 Sum_probs=83.9
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhcccCCC-----CCc--hhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHh-cc
Q 040755 156 TNVQSFVLEIIISFLLMFVISGVATDNRS-----IGE--LAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMH-QY 227 (275)
Q Consensus 156 s~~~~~~~E~~~T~ilv~~i~~~~~~~~~-----~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~~ 227 (275)
+.++.+++||++|++|+++.++....... ... ...+.+|+++.+.+++.+.+||+|+|||.+++..+.++ +|
T Consensus 11 ~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~ 90 (301)
T 2zz9_A 11 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 90 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSSSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcCCCH
Confidence 56899999999999999998876532111 111 25688999999999999999999999999999999886 79
Q ss_pred CceeeeeecchHHHHHHHHHHHHHhcC
Q 040755 228 KGLWVYIAGPIIGTILGGLAYNMIRFT 254 (275)
Q Consensus 228 ~~~wvy~v~p~~Ga~~a~~l~~~~~~~ 254 (275)
.....|+++|++|+++|+.+.+.++.+
T Consensus 91 ~~~~~YiiAQ~lGAi~Ga~lv~~~~~~ 117 (301)
T 2zz9_A 91 AKSVFYITAQCLGAIIGAGILYLVTPP 117 (301)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999888754
No 18
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.34 E-value=2e-12 Score=112.37 Aligned_cols=99 Identities=15% Similarity=0.232 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHh-cCCCCC
Q 040755 39 LQLLQKAIAEVIGTYFLIFTGCGSVAVNKIYGSVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIF-RHFPRK 117 (275)
Q Consensus 39 ~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~-g~~~~~ 117 (275)
.+..+.++.|+++||+|+++.+.... +.. ... ..++.+|+.+....+..++.||+.+|||+++++.+. |...|.
T Consensus 132 ~~~~~~~~~E~i~T~~Lv~~i~~~~d--~~~-~~~--~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~~ 206 (234)
T 2o9g_A 132 YSMLSALVVELVLSAGFLLVIHGATD--KFA-PAG--FAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWALE 206 (234)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTS--TTS-CTT--CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhcC--CCC-ccc--hHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCCc
Confidence 45788999999999999998776532 111 111 346777999999999999999999999999999986 444567
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhh
Q 040755 118 QVPIYIVAQLLGSVLASGSLYLIFD 142 (275)
Q Consensus 118 ~~~~yi~aQ~lGa~~g~~l~~~~~~ 142 (275)
++|+||++|++|+++|+++++.++.
T Consensus 207 ~~Wv~~vgP~~Ga~la~~~y~~~~~ 231 (234)
T 2o9g_A 207 QLWFFWVVPIVGGIIGGLIYRTLLE 231 (234)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred eeeeeehHHhHHHHHHHHHHHHHcC
Confidence 9999999999999999999888764
No 19
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.33 E-value=7.3e-13 Score=114.35 Aligned_cols=98 Identities=18% Similarity=0.307 Sum_probs=81.9
Q ss_pred chhHHHHHHHHHHHHHHHhhhhccc--CCCC---Cc--hhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHh-ccC
Q 040755 157 NVQSFVLEIIISFLLMFVISGVATD--NRSI---GE--LAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMH-QYK 228 (275)
Q Consensus 157 ~~~~~~~E~~~T~ilv~~i~~~~~~--~~~~---~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~~~ 228 (275)
.+|.+++||++|++|++..++.... ++.+ .. ...+.+|+.+.+.+++.+.+||+|+|||.+++..+.++ +|.
T Consensus 3 ~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~~ 82 (223)
T 3gd8_A 3 FWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIA 82 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCHH
Confidence 4689999999999999998876532 1111 11 34678999999999999999999999999999999876 788
Q ss_pred ceeeeeecchHHHHHHHHHHHHHhcC
Q 040755 229 GLWVYIAGPIIGTILGGLAYNMIRFT 254 (275)
Q Consensus 229 ~~wvy~v~p~~Ga~~a~~l~~~~~~~ 254 (275)
....|+++|++|+++|+.+.+.++++
T Consensus 83 ~~~~Yi~AQ~lGA~~ga~lv~~~~~~ 108 (223)
T 3gd8_A 83 KSVFYIAAQCLGAIIGAGILYLVTPP 108 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 99999999999999999998887643
No 20
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.33 E-value=7.8e-13 Score=117.35 Aligned_cols=98 Identities=26% Similarity=0.375 Sum_probs=81.9
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhccc-------CCCCC-----chhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHh
Q 040755 156 TNVQSFVLEIIISFLLMFVISGVATD-------NRSIG-----ELAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIV 223 (275)
Q Consensus 156 s~~~~~~~E~~~T~ilv~~i~~~~~~-------~~~~~-----~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~ 223 (275)
+.++.+++||++|++|+++.++.... ++..+ ...++.+|+.+.+.+++.+.+||+|+|||++++..+.
T Consensus 9 ~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~ 88 (271)
T 1j4n_A 9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLS 88 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHc
Confidence 45789999999999999988775321 11111 1346889999999999999999999999999999998
Q ss_pred Hh-ccCceeeeeecchHHHHHHHHHHHHHhc
Q 040755 224 MH-QYKGLWVYIAGPIIGTILGGLAYNMIRF 253 (275)
Q Consensus 224 ~~-~~~~~wvy~v~p~~Ga~~a~~l~~~~~~ 253 (275)
++ +|.....|+++|++|+++|+.+.+.++.
T Consensus 89 g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~ 119 (271)
T 1j4n_A 89 CQISVLRAIMYIIAQCVGAIVATAILSGITS 119 (271)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 87 7889999999999999999999988874
No 21
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.32 E-value=8.8e-12 Score=110.89 Aligned_cols=100 Identities=19% Similarity=0.070 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCCCCc
Q 040755 39 LQLLQKAIAEVIGTYFLIFTGCGSVAVNKIYGSVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFPRKQ 118 (275)
Q Consensus 39 ~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~~~~ 118 (275)
.+..+.++.|+++||+|+++.+.....+.. . ....++.+|+.+....+..++.||+.+|||+++++.+.....+..
T Consensus 166 ~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~--~--~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~~ 241 (279)
T 2w2e_A 166 ASRTRGLFLEAFGTAILCLTVLMLAVEKHR--A--TWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNY 241 (279)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTTSCST--T--GGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCTT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHccCCCC--C--cCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhccchhh
Confidence 457789999999999999988765432111 1 113467789999999999999999999999999999987544567
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhh
Q 040755 119 VPIYIVAQLLGSVLASGSLYLIFD 142 (275)
Q Consensus 119 ~~~yi~aQ~lGa~~g~~l~~~~~~ 142 (275)
+|+||++|++|+++|+++++.+..
T Consensus 242 ~WVy~vgPiiGa~la~~ly~~l~~ 265 (279)
T 2w2e_A 242 HWIYWLGPILGAFLAYSIWQMWKW 265 (279)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999888774
No 22
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.31 E-value=1.1e-12 Score=117.10 Aligned_cols=99 Identities=18% Similarity=0.284 Sum_probs=82.9
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhcc----cCCCCC-chhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHh-ccCc
Q 040755 156 TNVQSFVLEIIISFLLMFVISGVAT----DNRSIG-ELAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMH-QYKG 229 (275)
Q Consensus 156 s~~~~~~~E~~~T~ilv~~i~~~~~----~~~~~~-~~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~~~~ 229 (275)
+..+.+++||++|++|+++.+++.. .+...+ ...++.+|+++.+.+++.+.+||+|+|||.+++..+.++ +|..
T Consensus 6 ~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 85 (281)
T 1ldf_A 6 TLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRK 85 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCHHH
Confidence 5678999999999999998776432 111112 235788999999999999999999999999999999887 7999
Q ss_pred eeeeeecchHHHHHHHHHHHHHhcC
Q 040755 230 LWVYIAGPIIGTILGGLAYNMIRFT 254 (275)
Q Consensus 230 ~wvy~v~p~~Ga~~a~~l~~~~~~~ 254 (275)
...|+++|++|+++|+.+.+.++.+
T Consensus 86 ~~~Yi~AQ~lGA~~ga~l~~~~~~~ 110 (281)
T 1ldf_A 86 VIPFIVSQVAGAFCAAALVYGLYYN 110 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999998888754
No 23
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.31 E-value=1.6e-12 Score=114.55 Aligned_cols=99 Identities=24% Similarity=0.436 Sum_probs=82.6
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhccc---CCCCCc--hhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHh-ccCc
Q 040755 156 TNVQSFVLEIIISFLLMFVISGVATD---NRSIGE--LAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMH-QYKG 229 (275)
Q Consensus 156 s~~~~~~~E~~~T~ilv~~i~~~~~~---~~~~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~~~~ 229 (275)
+..+.+++||++|++|+++.+++... .+.... ...+.+|+.+.+.+++.+.+||+|+|||++++..+.++ +|..
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 87 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLKK 87 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHHH
Confidence 46789999999999999987764321 111112 24678899999999999999999999999999999887 7999
Q ss_pred eeeeeecchHHHHHHHHHHHHHhcC
Q 040755 230 LWVYIAGPIIGTILGGLAYNMIRFT 254 (275)
Q Consensus 230 ~wvy~v~p~~Ga~~a~~l~~~~~~~ 254 (275)
...|+++|++|+++|+.+.+.++.+
T Consensus 88 ~~~Yi~AQ~lGa~~ga~l~~~~~~~ 112 (258)
T 3c02_A 88 IPVYFFAQLLGAFVGTSTVYGLYHG 112 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcch
Confidence 9999999999999999999888754
No 24
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.30 E-value=1.4e-12 Score=117.23 Aligned_cols=99 Identities=18% Similarity=0.250 Sum_probs=82.7
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhccc---CC---CCCc--hhHHHHHHHHHHHHHHhcCCCCcccchhhhHHHHHhHh-c
Q 040755 156 TNVQSFVLEIIISFLLMFVISGVATD---NR---SIGE--LAGIAIGMTILLNVLVAGPVSGASMNPARSLGPAIVMH-Q 226 (275)
Q Consensus 156 s~~~~~~~E~~~T~ilv~~i~~~~~~---~~---~~~~--~~~~~ig~~v~~~~~~~~~~tG~~lNPAr~lg~~l~~~-~ 226 (275)
+.+|.+++||++|++|+++.++.... .. .... ...+.+|+++++.+++.+.+||+++|||.+++..+.++ +
T Consensus 59 ~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~~~ 138 (304)
T 3cn5_A 59 SFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVE 138 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCCCC
Confidence 46789999999999999998765321 11 1111 24678999999999999999999999999999999887 7
Q ss_pred cCceeeeeecchHHHHHHHHHHHHHhcC
Q 040755 227 YKGLWVYIAGPIIGTILGGLAYNMIRFT 254 (275)
Q Consensus 227 ~~~~wvy~v~p~~Ga~~a~~l~~~~~~~ 254 (275)
|.....|+++|++|+++|+.+.+.++..
T Consensus 139 ~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~ 166 (304)
T 3cn5_A 139 LLRALVYMIAQCLGAICGVGLVKAFMKG 166 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 8899999999999999999999988754
No 25
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.30 E-value=1e-11 Score=109.84 Aligned_cols=101 Identities=20% Similarity=0.168 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCCCCc
Q 040755 39 LQLLQKAIAEVIGTYFLIFTGCGSVAVNKIYGSVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFPRKQ 118 (275)
Q Consensus 39 ~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~~~~ 118 (275)
.+..+.++.|+++||+|+++.++... .+...... ..++.+|+.+.+.....++.||+.+|||+++++.+... .|.+
T Consensus 127 ~s~~~~~~~E~i~Tf~Lv~~il~~~d-~~~~~~~~--~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~-~~~~ 202 (266)
T 3d9s_A 127 TTQGQAMVVELILTFQLALCIFASTD-SRRTSPVG--SPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN-RFSP 202 (266)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHC-TTCCSCCC--CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHT-CCCT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhc-ccCCCccc--hHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcC-Cccc
Confidence 35778999999999999998887532 11111112 24567788888888889999999999999999999764 7888
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHhhc
Q 040755 119 -VPIYIVAQLLGSVLASGSLYLIFDV 143 (275)
Q Consensus 119 -~~~yi~aQ~lGa~~g~~l~~~~~~~ 143 (275)
+|+||++|++|+++|+++++.+...
T Consensus 203 ~~Wvy~vgP~~Ga~la~~~y~~l~~~ 228 (266)
T 3d9s_A 203 AHWVFWVGPIVGAVLAAILYFYLLFP 228 (266)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred CEeeeehHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999998887753
No 26
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.28 E-value=1.5e-11 Score=111.41 Aligned_cols=100 Identities=24% Similarity=0.274 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCchhHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCCCCc
Q 040755 39 LQLLQKAIAEVIGTYFLIFTGCGSVAVNKIYGSVTFPGICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFPRKQ 118 (275)
Q Consensus 39 ~~~~~~~~~EfigTf~lv~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~~~~ 118 (275)
.+..+.++.|+++||+|+++.+....... ..... ..++.+|+.+.+...+.++.||+.+|||+++++.+... .|.+
T Consensus 171 ~s~~~~f~~E~i~Tf~Lv~~Ila~~d~~~-~~~~~--~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~-~w~~ 246 (340)
T 3iyz_A 171 LTAGHGLLVELIITFQLVFTIFASCDDKR-TDVTG--SVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG-NWEN 246 (340)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhhcCcc-CCccc--chhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHcc-CCCc
Confidence 45678999999999999998776532211 11111 23566788887777777899999999999999999754 6889
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhh
Q 040755 119 VPIYIVAQLLGSVLASGSLYLIFD 142 (275)
Q Consensus 119 ~~~yi~aQ~lGa~~g~~l~~~~~~ 142 (275)
+|+||+++++|+++|+++++.++.
T Consensus 247 ~WVywvgPiiGailaallY~~l~~ 270 (340)
T 3iyz_A 247 HWIYWVGPIIGAVLAGALYEYVFC 270 (340)
T ss_pred EeehhHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999988874
No 27
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=88.46 E-value=12 Score=32.65 Aligned_cols=99 Identities=7% Similarity=0.048 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhh--cCC---cc-ccc
Q 040755 77 ICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFPRKQVPIYIVAQLLGSVLASGSLYLIFD--VKD---EA-FFG 150 (275)
Q Consensus 77 ~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~--~~~---~~-~~~ 150 (275)
-++.+.+++...++.-+..-=+ |--.++ ..+.++.+|.+.+--|.-=++|=++|++++-.+.. ... .. ...
T Consensus 71 ~g~~F~vGL~lVvl~G~ELFTg--n~l~~~-a~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~~~~ 147 (285)
T 3kcu_A 71 GGICFSLGLILCVVCGADLFTS--TVLIVV-AKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGL 147 (285)
T ss_dssp HHHHHTHHHHHHHHHTCCCTTT--THHHHH-HHTTTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTHHHH
T ss_pred HHHHHHHHHHHHHHhCcccccc--chHHHH-HHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCchHHHH
Confidence 4566666666666666655323 422233 34577788776655444444444444444433321 110 10 000
Q ss_pred -------ccCCCCchhHHHHHHHHHHHHHHHhhhh
Q 040755 151 -------TIPVGTNVQSFVLEIIISFLLMFVISGV 178 (275)
Q Consensus 151 -------~~p~~s~~~~~~~E~~~T~ilv~~i~~~ 178 (275)
..-..+..+.|+-=.+|-++..+.+...
T Consensus 148 ~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~ 182 (285)
T 3kcu_A 148 NVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMS 182 (285)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122366778888888888888877764
No 28
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=77.20 E-value=4.8 Score=34.92 Aligned_cols=100 Identities=11% Similarity=0.083 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcCC----ccccc--
Q 040755 77 ICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFPRKQVPIYIVAQLLGSVLASGSLYLIFDVKD----EAFFG-- 150 (275)
Q Consensus 77 ~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~----~~~~~-- 150 (275)
-++.+.+++...++.-+..-=+ |-.......+.|+.+|.+.+--|.-=++|=++|++++-.++.... .....
T Consensus 67 ~g~~F~~Gl~lVvl~g~eLfTg--n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg~~~~~~~~~~~ 144 (268)
T 3tds_E 67 MGLSFAIALSLVIMTGTELFTG--NNMVMSAGMLNKGVSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGLVDKGPVAEFF 144 (268)
T ss_dssp HHHTCTHHHHHHHHHTCCCHHH--HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSSHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcccccc--chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCcHHHHHH
Confidence 3455555555555554443211 433222455778888888776666666666666655544442111 00000
Q ss_pred -----ccCCCCchhHHHHHHHHHHHHHHHhhhh
Q 040755 151 -----TIPVGTNVQSFVLEIIISFLLMFVISGV 178 (275)
Q Consensus 151 -----~~p~~s~~~~~~~E~~~T~ilv~~i~~~ 178 (275)
..-..+..+.|+-=.+|-++..+.+...
T Consensus 145 ~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~ 177 (268)
T 3tds_E 145 ANTAASKASMPFTALFFRGILCNILVCVSVLCS 177 (268)
T ss_dssp HHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0112356777888888888888777754
No 29
>3kly_A Putative formate transporter 1; membrane protein, channel, structural genomics, PSI-2, protein structure initiative; HET: BOG; 2.10A {Vibrio cholerae} PDB: 3klz_A*
Probab=76.01 E-value=12 Score=32.68 Aligned_cols=98 Identities=12% Similarity=0.112 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHhcCC-CccccchHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhh--cCC---cc-cc
Q 040755 77 ICVVWGLIVMVMIYSVGHI-SGAHFNPAVTITFAIFRHFPRKQVPIYIVAQLLGSVLASGSLYLIFD--VKD---EA-FF 149 (275)
Q Consensus 77 ~a~~~g~~v~~~i~~~g~i-SG~h~NPavTl~~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~--~~~---~~-~~ 149 (275)
-++.+.+++...++.-+.. +|-.+ .++ ..+.++.+|.+.+--|.-=++|=++|++++-.+.. ... .. ..
T Consensus 70 ~g~~F~vGL~lVvl~g~ELFTgn~l---~~~-~~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~~~ 145 (280)
T 3kly_A 70 GGLAFSLGLILVVITGGELFTSSVL---ILV-AKASGKISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFMEDGGQLG 145 (280)
T ss_dssp HHHHHHHHHHHHHHHTCCCTTTTCC---CCS-SSSSSSCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTHHH
T ss_pred HHHHHHHHHHHHHHccccccccchH---HHH-HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCchHHH
Confidence 4566666666666666555 33333 222 24567889888877766666666666655544431 110 10 00
Q ss_pred c-------ccCCCCchhHHHHHHHHHHHHHHHhhhh
Q 040755 150 G-------TIPVGTNVQSFVLEIIISFLLMFVISGV 178 (275)
Q Consensus 150 ~-------~~p~~s~~~~~~~E~~~T~ilv~~i~~~ 178 (275)
. ..-..+..+.|+-=.+|-++..+.+...
T Consensus 146 ~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~ 181 (280)
T 3kly_A 146 LNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWMT 181 (280)
T ss_dssp HHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 1122366788888888888888877764
No 30
>4fc4_A Nitrite transporter NIRC; alpha-helical inner membrane protein, ION channel, cytoplasm membrane, transport protein; HET: BOG; 2.40A {Salmonella enterica subsp}
Probab=70.13 E-value=6.5 Score=33.94 Aligned_cols=100 Identities=10% Similarity=0.087 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHhhcCC---ccccc---
Q 040755 77 ICVVWGLIVMVMIYSVGHISGAHFNPAVTITFAIFRHFPRKQVPIYIVAQLLGSVLASGSLYLIFDVKD---EAFFG--- 150 (275)
Q Consensus 77 ~a~~~g~~v~~~i~~~g~iSG~h~NPavTl~~~l~g~~~~~~~~~yi~aQ~lGa~~g~~l~~~~~~~~~---~~~~~--- 150 (275)
-++.+.+++...++.-+..-=+ |-.......+.|+.+|.+.+--|.-=++|=++|++++-.++.... .....
T Consensus 61 ~g~~F~vGl~lVvl~g~eLfTg--n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~~g~~~~~~~~~~~ 138 (261)
T 4fc4_A 61 MGATFGIALTLVIIAGSELFTG--HTMFLTLGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTSIV 138 (261)
T ss_dssp HHHHTTHHHHHHHHTCCCCHHH--HHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTSSCTTSHH
T ss_pred HHHHHHHHHHHHHHcCCccccc--chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCchHHHHH
Confidence 3455555555554443333111 433333345568888888777665555566665555444332110 00000
Q ss_pred -----ccCCCCchhHHHHHHHHHHHHHHHhhhh
Q 040755 151 -----TIPVGTNVQSFVLEIIISFLLMFVISGV 178 (275)
Q Consensus 151 -----~~p~~s~~~~~~~E~~~T~ilv~~i~~~ 178 (275)
..-..+..+.|+-=.+|-++..+.+...
T Consensus 139 ~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~ 171 (261)
T 4fc4_A 139 HSVALAKTTAPATVLFFKGALCNWLVCLAIWMA 171 (261)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 0011245677777777888877777664
No 31
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=46.59 E-value=2.6 Score=37.62 Aligned_cols=22 Identities=18% Similarity=0.228 Sum_probs=18.0
Q ss_pred hcCCCccccchHHHHHHHHhcC
Q 040755 92 VGHISGAHFNPAVTITFAIFRH 113 (275)
Q Consensus 92 ~g~iSG~h~NPavTl~~~l~g~ 113 (275)
.+.-||||++||++++-.+..+
T Consensus 8 ~~GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 8 MAGGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp ECCSSHHHHHHHHHHHHHHHHT
T ss_pred EcCCCHHHHHHHHHHHHHHHhC
Confidence 4455899999999999998753
No 32
>2kgh_A Venom peptide 2; insecticidal peptides, disulfide bond, neurotoxin, secreted, toxin; NMR {Brachypelma ruhnaui}
Probab=41.65 E-value=12 Score=21.85 Aligned_cols=17 Identities=24% Similarity=0.823 Sum_probs=13.3
Q ss_pred ccCCCCCcCCCCCcccc
Q 040755 9 VEEGNEPCTTPASTKCS 25 (275)
Q Consensus 9 ~~~~~~~~~~~~~~~~~ 25 (275)
+|.+..||.|++.++|+
T Consensus 10 i~kegkpckpkg~kkc~ 26 (39)
T 2kgh_A 10 IKKEGKPCKPKGEKKCT 26 (39)
T ss_dssp TTTSCSEECCSSCSSCC
T ss_pred eeccCCcCccccccccc
Confidence 44445999999999986
Done!