Your job contains 1 sequence.
>040757
MEALLASYGDSYSDSDTERGNPSNSGINSSSSQPETTNLPLPPPPLSLVNPPNSLGKYNI
SSINGSLSILIYAHQLFAVLPTKGSIDHHLPTVLIPLAPKKELAQFLKRVSSILPGIYVV
DVDVPFTSLRKDDSELEQVAFGREFHISLGRTVPIRVHQIDSIVAMLRQRLQSQRRYWID
FSKWEAFVNDDRTRTFLSLEVITGGLLEITKQIQVVNEVYRLHNLPEFYKDPRPHISLAW
LLGDVSSSLKRVVVEEMKRLSVESSLHKHFFSCKFGGIHCKIGKKTYKICKFSGE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040757
(295 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2176162 - symbol:AT5G51170 "AT5G51170" species... 664 6.8e-71 2
UNIPROTKB|F1NE74 - symbol:USB1 "Uncharacterized protein" ... 232 1.9e-19 1
ZFIN|ZDB-GENE-040801-197 - symbol:usb1 "U6 snRNA biogenes... 222 2.2e-18 1
MGI|MGI:2142454 - symbol:Usb1 "U6 snRNA biogenesis 1" spe... 210 4.1e-17 1
RGD|1305215 - symbol:Usb1 "U6 snRNA biogenesis 1" species... 204 1.8e-16 1
UNIPROTKB|Q9BQ65 - symbol:USB1 "Putative U6 snRNA phospho... 192 3.3e-15 1
UNIPROTKB|F1RFS6 - symbol:USB1 "Uncharacterized protein" ... 191 4.2e-15 1
UNIPROTKB|Q0II50 - symbol:USB1 "Putative U6 snRNA phospho... 188 8.8e-15 1
DICTYBASE|DDB_G0279967 - symbol:DDB_G0279967 "UPF0406 fam... 184 2.3e-14 1
FB|FBgn0037713 - symbol:CG16790 species:7227 "Drosophila ... 163 1.3e-10 1
>TAIR|locus:2176162 [details] [associations]
symbol:AT5G51170 "AT5G51170" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
Pfam:PF09749 EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB023044
InterPro:IPR019146 PANTHER:PTHR13522 EMBL:AY088702 EMBL:BT004333
EMBL:BT005590 IPI:IPI00538019 RefSeq:NP_568753.1 UniGene:At.29692
ProteinModelPortal:Q9LU57 IntAct:Q9LU57 DNASU:835191
EnsemblPlants:AT5G51170.1 GeneID:835191 KEGG:ath:AT5G51170
TAIR:At5g51170 HOGENOM:HOG000272712 InParanoid:Q9LU57 OMA:GNYALHV
PhylomeDB:Q9LU57 ProtClustDB:CLSN2689985 ArrayExpress:Q9LU57
Genevestigator:Q9LU57 Uniprot:Q9LU57
Length = 285
Score = 664 (238.8 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 125/207 (60%), Positives = 159/207 (76%)
Query: 89 HLPTVLIPLAPKKELAQFLKRVSSILPGIYVVDVDVPFTSLRKDDSELEQVAFGREFHIS 148
++P V IP PKKE+ FLK+V+S++P +++V+ DVP + L KDD + E+ A GREFHIS
Sbjct: 81 YVP-VCIPPLPKKEIVCFLKKVASVVPHLHLVEADVPLSILCKDDQKFER-ALGREFHIS 138
Query: 149 LGRTVPIRVHQIDSIVAMLRQRLQSQRRYWIDFSKWEAFVNDDRTRTFLSLEVITGGLLE 208
LGR VP+RVHQI+S+++MLRQ+LQ Q+RY IDF+KWE FVNDD TR+FLSLE+ T GL E
Sbjct: 139 LGRNVPLRVHQINSVISMLRQKLQLQKRYLIDFNKWEVFVNDDHTRSFLSLEITTSGLSE 198
Query: 209 ITKQIQVVNEVYRLHNLPEFYKDPRPHISLAWLLGDVSSSLKRVVVEEMKRLSVESSLHK 268
I+KQI VNEVY+LHNLPEFYKDPRPHISL W LGD+ +SLK V E+++L +
Sbjct: 199 ISKQIDAVNEVYKLHNLPEFYKDPRPHISLVWALGDIRTSLKGAVDVELRKLRAGGCVQN 258
Query: 269 HFFSCKFGGIHCKIGKKTYKICKFSGE 295
F+ KF GI CKIG KT+KICK E
Sbjct: 259 RIFTSKFCGIECKIGNKTHKICKLPDE 285
Score = 72 (30.4 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 15/18 (83%), Positives = 16/18 (88%)
Query: 1 MEALLASYGDSYSDSDTE 18
MEAL ASYGDS SDSDT+
Sbjct: 1 MEALRASYGDSSSDSDTD 18
>UNIPROTKB|F1NE74 [details] [associations]
symbol:USB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0034477 "U6 snRNA 3'-end processing"
evidence=IEA] Pfam:PF09749 GeneTree:ENSGT00390000004596 OMA:FHLSLAW
InterPro:IPR019146 PANTHER:PTHR13522 EMBL:AADN02065746
EMBL:AADN02065747 IPI:IPI00574691 Ensembl:ENSGALT00000001326
Uniprot:F1NE74
Length = 256
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 51/146 (34%), Positives = 83/146 (56%)
Query: 144 EFHISLGRTVPIRVHQIDSIVAMLRQRLQSQRRYWIDFSKWEAFVNDDRTRTFLSLEVIT 203
EFH+SL ++V +R H I + L++RL + R++ + + + N ++TRTF+ LEV T
Sbjct: 109 EFHVSLSQSVVLRYHWISPFMQSLKERLAAFHRFFCVADRVKVYTNQNKTRTFVGLEVST 168
Query: 204 GG--LLEITKQIQVVNEVYRLHNLPEFYKDPRPHISLAWLLGDVSSSLKRVVVEEMKRLS 261
G LLE+ ++ V E Y +LP FYKDP HIS+AW +GD+ SL+ ++E++ +
Sbjct: 169 GHFQLLELVSEVDKVMEEY---DLPVFYKDPSFHISMAWCVGDLRGSLEGQCLQELQDIV 225
Query: 262 VESSLHKHFFSCKFGGIHCKIGKKTY 287
++ I CK G K +
Sbjct: 226 DRFEDSARILRVQWEQIRCKSGNKFF 251
>ZFIN|ZDB-GENE-040801-197 [details] [associations]
symbol:usb1 "U6 snRNA biogenesis 1" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] Pfam:PF09749
ZFIN:ZDB-GENE-040801-197 GO:GO:0005634 GO:GO:0008380 GO:GO:0006397
GO:GO:0090305 GO:GO:0004518 CTD:79650 eggNOG:NOG251744
GeneTree:ENSGT00390000004596 HOGENOM:HOG000047515
HOVERGEN:HBG081315 OrthoDB:EOG4CVG84 HAMAP:MF_03040
InterPro:IPR019146 PANTHER:PTHR13522 EMBL:BC077163 IPI:IPI00865833
RefSeq:NP_001003460.1 UniGene:Dr.84507 STRING:Q6DEF6
Ensembl:ENSDART00000007029 GeneID:445066 KEGG:dre:445066
InParanoid:Q6DEF6 NextBio:20831829 ArrayExpress:Q6DEF6 Bgee:Q6DEF6
Uniprot:Q6DEF6
Length = 276
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 53/147 (36%), Positives = 84/147 (57%)
Query: 144 EFHISLGRTVPIRVHQIDSIVAMLRQRLQSQRRYWIDFSKWEAFVNDDRTRTFLSLEVIT 203
EFH+SL +TV +R H I V +R L ++++ K + + N ++TRTFL +EV T
Sbjct: 129 EFHLSLSKTVVLRHHWIQPFVQSIRTSLTHFQKFYCVAYKLKVYSNAEKTRTFLGMEVST 188
Query: 204 GG--LLEITKQIQVVNEVYRLHNLPEFYKDPRPHISLAWLLGDVSSSLKRVVVEEMKRLS 261
G LLE++K +V+E + NL FY+DP HISLAW +GD + LK+ + E++ L
Sbjct: 189 GTPHLLELSK---IVDETMKEFNLSTFYEDPSFHISLAWCVGDQTERLKKACLLELQGL- 244
Query: 262 VESSLHKHFFS-CKFGGIHCKIGKKTY 287
+++ F + + CK G K +
Sbjct: 245 IDAHEDGPFHARLNCNELRCKTGNKVF 271
>MGI|MGI:2142454 [details] [associations]
symbol:Usb1 "U6 snRNA biogenesis 1" species:10090 "Mus
musculus" [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=ISO] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0034477 "U6 snRNA 3'-end
processing" evidence=ISO] Pfam:PF09749 MGI:MGI:2142454
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0090305
GO:GO:0004518 CTD:79650 eggNOG:NOG251744
GeneTree:ENSGT00390000004596 HOGENOM:HOG000047515
HOVERGEN:HBG081315 OrthoDB:EOG4CVG84 GO:GO:0034477 HAMAP:MF_03040
InterPro:IPR019146 PANTHER:PTHR13522 EMBL:AK135527 EMBL:AK160901
EMBL:AK168683 EMBL:BC016418 IPI:IPI00127404 RefSeq:NP_598715.2
UniGene:Mm.29069 ProteinModelPortal:Q91W78 PhosphoSite:Q91W78
PRIDE:Q91W78 Ensembl:ENSMUST00000034245 GeneID:101985
KEGG:mmu:101985 UCSC:uc009myg.2 InParanoid:Q91W78 NextBio:355218
Bgee:Q91W78 CleanEx:MM_AA960436 Genevestigator:Q91W78
Uniprot:Q91W78
Length = 267
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 45/146 (30%), Positives = 80/146 (54%)
Query: 144 EFHISLGRTVPIRVHQIDSIVAMLRQRLQSQRRYWIDFSKWEAFVNDDRTRTFLSLEVIT 203
EFH+SL ++V +R H I V +L+ R+ S +R++ ++ + + N ++TRTF+ LEV +
Sbjct: 120 EFHVSLSQSVVLRHHWILPFVQVLKDRMASFQRFFFTANRVKIYTNQEKTRTFIGLEV-S 178
Query: 204 GGLLEITKQIQVVNEVYRLHNLPEFYKDPRPHISLAWLLGDVSSSLKRVVVEEMKRLSVE 263
G + + V+ + +L FY+DP HISLAW +GD S L+ ++E++ + E
Sbjct: 179 SGHAQFLDLVSEVDRAMKEFDLTTFYQDPSFHISLAWCVGDASLQLEGQCLQELQEIVDE 238
Query: 264 SSLHKHFFSCKFGGIHCKIGKKTYKI 289
+ + CK G K + +
Sbjct: 239 FEDSEMLLRVLANQVRCKSGNKFFSM 264
>RGD|1305215 [details] [associations]
symbol:Usb1 "U6 snRNA biogenesis 1" species:10116 "Rattus
norvegicus" [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=ISO] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=ISO;ISS] [GO:0034477 "U6 snRNA 3'-end processing"
evidence=ISO;ISS] Pfam:PF09749 RGD:1305215 GO:GO:0005634
GO:GO:0008380 GO:GO:0006397 GO:GO:0090305 GO:GO:0004518 CTD:79650
eggNOG:NOG251744 GeneTree:ENSGT00390000004596 HOGENOM:HOG000047515
HOVERGEN:HBG081315 OMA:FHLSLAW OrthoDB:EOG4CVG84 GO:GO:0034477
HAMAP:MF_03040 InterPro:IPR019146 PANTHER:PTHR13522 EMBL:BC088280
IPI:IPI00359057 RefSeq:NP_001014035.1 UniGene:Rn.95149
Ensembl:ENSRNOT00000017960 GeneID:307643 KEGG:rno:307643
UCSC:RGD:1305215 InParanoid:Q5I0I5 NextBio:657695
Genevestigator:Q5I0I5 Uniprot:Q5I0I5
Length = 267
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 44/146 (30%), Positives = 79/146 (54%)
Query: 144 EFHISLGRTVPIRVHQIDSIVAMLRQRLQSQRRYWIDFSKWEAFVNDDRTRTFLSLEVIT 203
EFH+SL ++V +R H I V +L+ R+ S +R++ ++ + + N ++TRTF+ LEV +
Sbjct: 120 EFHLSLSQSVVLRHHWILPFVQVLKDRMASFQRFFFTANRVKIYTNQEKTRTFIGLEV-S 178
Query: 204 GGLLEITKQIQVVNEVYRLHNLPEFYKDPRPHISLAWLLGDVSSSLKRVVVEEMKRLSVE 263
G + + V+ V + +L FY+DP H+SLAW +GD L+ +E++ + E
Sbjct: 179 SGHAQFLDMVSEVDRVMKEFDLTTFYQDPSFHVSLAWCVGDARLQLEGQCQQELQEIVDE 238
Query: 264 SSLHKHFFSCKFGGIHCKIGKKTYKI 289
+ + CK G K + +
Sbjct: 239 FEDSEMLLRVLAEQVRCKSGNKFFSM 264
>UNIPROTKB|Q9BQ65 [details] [associations]
symbol:USB1 "Putative U6 snRNA phosphodiesterase"
species:9606 "Homo sapiens" [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0000175 "3'-5'-exoribonuclease activity"
evidence=IDA] [GO:0034477 "U6 snRNA 3'-end processing"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] Pfam:PF09749
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0090305
GO:GO:0004518 EMBL:AC010543 Orphanet:1775 CTD:79650
eggNOG:NOG251744 HOVERGEN:HBG081315 OMA:FHLSLAW OrthoDB:EOG4CVG84
GO:GO:0034477 HAMAP:MF_03040 InterPro:IPR019146 PANTHER:PTHR13522
EMBL:AK023216 EMBL:AK301494 EMBL:AK303121 EMBL:AC012182
EMBL:BC004415 EMBL:BC006291 EMBL:BC007774 EMBL:BC010099
EMBL:BC021554 IPI:IPI00304431 IPI:IPI00641878 IPI:IPI01008741
RefSeq:NP_001182231.1 RefSeq:NP_001191840.1 RefSeq:NP_078874.2
UniGene:Hs.408702 ProteinModelPortal:Q9BQ65 IntAct:Q9BQ65
MINT:MINT-1184765 STRING:Q9BQ65 PhosphoSite:Q9BQ65 DMDM:74732815
PaxDb:Q9BQ65 PRIDE:Q9BQ65 DNASU:79650 Ensembl:ENST00000219281
Ensembl:ENST00000423271 Ensembl:ENST00000539737 GeneID:79650
KEGG:hsa:79650 UCSC:uc002emz.3 GeneCards:GC16P058033
H-InvDB:HIX0019615 HGNC:HGNC:25792 HPA:HPA041791 MIM:604173
MIM:613276 neXtProt:NX_Q9BQ65 Orphanet:221046 PharmGKB:PA143485394
HOGENOM:HOG000213585 InParanoid:Q9BQ65 PhylomeDB:Q9BQ65
ChiTaRS:C16orf57 GenomeRNAi:79650 NextBio:68808 ArrayExpress:Q9BQ65
Bgee:Q9BQ65 CleanEx:HS_C16orf57 Genevestigator:Q9BQ65
Uniprot:Q9BQ65
Length = 265
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 44/145 (30%), Positives = 75/145 (51%)
Query: 145 FHISLGRTVPIRVHQIDSIVAMLRQRLQSQRRYWIDFSKWEAFVNDDRTRTFLSLEVITG 204
FH+SL ++V +R H I V L+ R+ S R++ ++ + + N ++TRTF+ LEV T
Sbjct: 119 FHLSLSQSVVLRHHWILPFVQALKARMTSFHRFFFTANQVKIYTNQEKTRTFIGLEV-TS 177
Query: 205 GLLEITKQIQVVNEVYRLHNLPEFYKDPRPHISLAWLLGDVSSSLKRVVVEEMKRLSVES 264
G + + V+ V NL FY+DP H+SLAW +GD L+ ++E++ +
Sbjct: 178 GHAQFLDLVSEVDRVMEEFNLTTFYQDPSFHLSLAWCVGDARLQLEGQCLQELQAIVDGF 237
Query: 265 SLHKHFFSCKFGGIHCKIGKKTYKI 289
+ + CK G K + +
Sbjct: 238 EDAEVLLRVHTEQVRCKSGNKFFSM 262
>UNIPROTKB|F1RFS6 [details] [associations]
symbol:USB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034477 "U6 snRNA 3'-end processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] Pfam:PF09749 GeneTree:ENSGT00390000004596
InterPro:IPR019146 PANTHER:PTHR13522 EMBL:CU466242
Ensembl:ENSSSCT00000003107 OMA:FHISISW Uniprot:F1RFS6
Length = 150
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 44/145 (30%), Positives = 76/145 (52%)
Query: 145 FHISLGRTVPIRVHQIDSIVAMLRQRLQSQRRYWIDFSKWEAFVNDDRTRTFLSLEVITG 204
FH+SL ++V +R H I V +L+ R+ S +R+ + + + N ++TRTF+ LEV T
Sbjct: 4 FHLSLSQSVVLRHHWILPFVQVLKDRVASFQRFCFTADQVKIYTNQEKTRTFVGLEV-TS 62
Query: 205 GLLEITKQIQVVNEVYRLHNLPEFYKDPRPHISLAWLLGDVSSSLKRVVVEEMKRLSVES 264
G + + V++V +L FY+DP H+SLAW +GD L+ ++E++ +
Sbjct: 63 GHAQFLDLVSEVDKVMEEFDLTTFYQDPSFHVSLAWCVGDARLQLEGRCLQELQEIVDAF 122
Query: 265 SLHKHFFSCKFGGIHCKIGKKTYKI 289
+ I CK G K + +
Sbjct: 123 EDSEMLLRMHAEQIRCKSGNKFFSM 147
>UNIPROTKB|Q0II50 [details] [associations]
symbol:USB1 "Putative U6 snRNA phosphodiesterase"
species:9913 "Bos taurus" [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0034477 "U6
snRNA 3'-end processing" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0006397 "mRNA processing" evidence=IEA]
Pfam:PF09749 GO:GO:0005634 GO:GO:0008380 GO:GO:0006397
GO:GO:0090305 GO:GO:0004518 EMBL:BC122807 IPI:IPI00693025
RefSeq:NP_001068945.1 UniGene:Bt.11459 Ensembl:ENSBTAT00000020923
GeneID:510934 KEGG:bta:510934 CTD:79650 eggNOG:NOG251744
GeneTree:ENSGT00390000004596 HOGENOM:HOG000047515
HOVERGEN:HBG081315 InParanoid:Q0II50 OMA:FHLSLAW OrthoDB:EOG4CVG84
NextBio:20869691 GO:GO:0034477 HAMAP:MF_03040 InterPro:IPR019146
PANTHER:PTHR13522 Uniprot:Q0II50
Length = 265
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 45/145 (31%), Positives = 73/145 (50%)
Query: 145 FHISLGRTVPIRVHQIDSIVAMLRQRLQSQRRYWIDFSKWEAFVNDDRTRTFLSLEVITG 204
FH+SL ++V +R H I V L+ R+ S R+ + + + N ++TRTF+ LEV T
Sbjct: 119 FHLSLSQSVVLRHHWILPFVQALKDRVASFHRFCFTTDQVKIYTNQEKTRTFVGLEV-TS 177
Query: 205 GLLEITKQIQVVNEVYRLHNLPEFYKDPRPHISLAWLLGDVSSSLKRVVVEEMKRLSVES 264
G + V+ V +L FY+DP HISLAW +GD ++ ++E++ + E
Sbjct: 178 GHAHFLDLVAEVDRVMEEFDLSTFYQDPSFHISLAWCVGDARLQMEGPCLQELQGIVDEF 237
Query: 265 SLHKHFFSCKFGGIHCKIGKKTYKI 289
+ I CK G K + +
Sbjct: 238 EDSEMLLRAYAEQIRCKSGNKFFSM 262
>DICTYBASE|DDB_G0279967 [details] [associations]
symbol:DDB_G0279967 "UPF0406 family protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0090305 "nucleic acid phosphodiester bond hydrolysis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] Pfam:PF09749
dictyBase:DDB_G0279967 GO:GO:0005634 GO:GO:0008380 GO:GO:0006397
EMBL:AAFI02000035 GO:GO:0090305 GO:GO:0004518 eggNOG:NOG251744
HAMAP:MF_03040 InterPro:IPR019146 PANTHER:PTHR13522
RefSeq:XP_641434.1 EnsemblProtists:DDB0266862 GeneID:8622319
KEGG:ddi:DDB_G0279967 OMA:NQSRIFL ProtClustDB:CLSZ2846810
Uniprot:Q54W16
Length = 275
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 50/133 (37%), Positives = 72/133 (54%)
Query: 124 VPFTSLRKDDSEL-EQVA-FGRE----------FHISLGRTVPIRVHQIDSIVAMLRQRL 171
VP T R D EL EQV G E FHIS+ RT PIR H I++ L++ L
Sbjct: 89 VP-TKSRNDIKELIEQVKEIGNEINIKQDTETCFHISISRTFPIREHHIETFTQELKKTL 147
Query: 172 QSQRRYWIDFSKWEA--FVNDDRTRTFLSLEVITGGLLEITKQIQVVNEVYRLHNLPEFY 229
++QR I SK E F+ND+++R FLS+ + I K I+ ++ L P++Y
Sbjct: 148 KNQRSIDIQLSK-ECCVFINDNQSRIFLSIPINQSFKSNILKLIERIDSCLSLFKFPKYY 206
Query: 230 KDPRPHISLAWLL 242
+P PH+S++W L
Sbjct: 207 DNPEPHLSISWSL 219
>FB|FBgn0037713 [details] [associations]
symbol:CG16790 species:7227 "Drosophila melanogaster"
[GO:0005515 "protein binding" evidence=IPI] [GO:0016070 "RNA
metabolic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR009097 Pfam:PF09749 EMBL:AE014297 GO:GO:0005634
GO:GO:0008380 GO:GO:0006397 GO:GO:0090305 SUPFAM:SSF55144
GO:GO:0004518 eggNOG:NOG251744 GeneTree:ENSGT00390000004596
HAMAP:MF_03040 InterPro:IPR019146 PANTHER:PTHR13522 EMBL:BT023530
EMBL:BT023543 RefSeq:NP_649911.1 UniGene:Dm.24041
ProteinModelPortal:Q9VHB3 IntAct:Q9VHB3 MINT:MINT-329328
PaxDb:Q9VHB3 PRIDE:Q9VHB3 EnsemblMetazoa:FBtr0082112 GeneID:41155
KEGG:dme:Dmel_CG16790 UCSC:CG16790-RA FlyBase:FBgn0037713
InParanoid:Q9VHB3 OMA:TYVYVPA OrthoDB:EOG49ZW57 PhylomeDB:Q9VHB3
GenomeRNAi:41155 NextBio:822449 Bgee:Q9VHB3 Uniprot:Q9VHB3
Length = 258
Score = 163 (62.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 44/148 (29%), Positives = 72/148 (48%)
Query: 146 HISLGRTVPIRVHQIDSIVAMLRQRLQSQRRYWIDFSKWEAFVNDDRTRTFLSLEVITGG 205
H+SL RTV ++ HQID L+ L S + + N++RTRTF++ +
Sbjct: 117 HLSLSRTVVLQYHQIDEFSRSLQSALNSSAGFAATLQGLRIYTNEERTRTFIAAPLDAAF 176
Query: 206 LLEITKQIQVVNEVYRLHNLPEFYKDPRP-HISLAWLLGDVSSSLKRVVVEEMKRLSVES 264
+ ++T +Q +++V + L +FY DP H+SL W +GD + L + E + L +
Sbjct: 177 VEKMTAILQPIDQVMLDYRLQQFY-DPASFHVSLLWCVGDQETLLNEKLTELKELLDDQD 235
Query: 265 SLHKHFFSC-KFGGIHCKIGKK--TYKI 289
L C +H K G K TY +
Sbjct: 236 KL------CLAVNEVHLKCGNKDFTYSL 257
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 295 251 0.00081 114 3 11 22 0.41 33
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 611 (65 KB)
Total size of DFA: 195 KB (2111 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.20u 0.13s 20.33t Elapsed: 00:00:01
Total cpu time: 20.20u 0.13s 20.33t Elapsed: 00:00:01
Start: Sat May 11 10:43:15 2013 End: Sat May 11 10:43:16 2013