BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040760
(108 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 79/148 (53%), Gaps = 51/148 (34%)
Query: 2 SLVNSHGEAKQAFGESSSDSNEVEFSGGGGQDEPSTLEGTGGNLLLR------------- 48
SL S EAK+ G S +DS+E EFSGG GQDEPS LEG G L +
Sbjct: 254 SLARSRDEAKKGVGGSGNDSDEAEFSGGSGQDEPSLLEGNCGELSAKSLGSKKRKRSGED 313
Query: 49 --------------------------------------GKQGSQTSDQPKEEYIHVRARR 70
GKQGSQ SDQPKEEYIHVRARR
Sbjct: 314 AELDQAKGTPQSAKGSPETQQKGDQKPTSTTSKASGKQGKQGSQGSDQPKEEYIHVRARR 373
Query: 71 GQATNSHSLVERVRREKISERMKFLQNL 98
GQATNSHSL ERVRREKISERMKFLQ+L
Sbjct: 374 GQATNSHSLAERVRREKISERMKFLQDL 401
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 80/151 (52%), Gaps = 54/151 (35%)
Query: 2 SLVNSHGEAKQAFGESSSDSNEVEFSGGGGQDEPSTLEGTG------------------- 42
SLV S+ EAKQ G S +S E EFSGGGGQ+E STLEG G
Sbjct: 253 SLVRSNDEAKQGAGGSGDESEEAEFSGGGGQEEASTLEGNGMELSAKSLGLKKRKRNGQD 312
Query: 43 -------GNLL-------------------------LRGKQ---GSQTSDQPKEEYIHVR 67
GNL GKQ GSQ SD PKEEYIHVR
Sbjct: 313 IELDQAKGNLQSVEAAKDNVEAQQKGDQTPTSTPNKTSGKQGKQGSQASDPPKEEYIHVR 372
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNL 98
ARRGQATNSHSL ERVRREKISERMKFLQ+L
Sbjct: 373 ARRGQATNSHSLAERVRREKISERMKFLQDL 403
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 76/151 (50%), Gaps = 54/151 (35%)
Query: 2 SLVNSHGEAKQAFGESSSDSNEVEFSGGGGQDEPSTLEG-----------------TGGN 44
SL S EAKQ G S +DS+E EFSGGGGQDEPS LEG G +
Sbjct: 32 SLARSRDEAKQGMGGSGNDSDEAEFSGGGGQDEPSMLEGNCRELSAKSLGSNKRKRNGQD 91
Query: 45 LLLRGKQGSQTSDQP-------------------------------------KEEYIHVR 67
L +G+ S +P KEEYIHVR
Sbjct: 92 AELDQAKGTPQSAEPAKGSPETQQKGDQKPTSTTSKDAGKQGKQGSLGSDQPKEEYIHVR 151
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNL 98
ARRGQATNSHSL ERVRREKISERMKFLQ+L
Sbjct: 152 ARRGQATNSHSLAERVRREKISERMKFLQDL 182
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 64/89 (71%), Gaps = 5/89 (5%)
Query: 10 AKQAFGESSSDSNEVEFSGGGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRAR 69
+ Q GE+S D+ E++ G PS++ N GKQG+Q SD PKEEYIHVRAR
Sbjct: 356 SPQQPGEASKDNPEIQHKG---DQNPSSVPSK--NTGKHGKQGAQASDPPKEEYIHVRAR 410
Query: 70 RGQATNSHSLVERVRREKISERMKFLQNL 98
RGQATNSHSL ERVRREKISERMKFLQ+L
Sbjct: 411 RGQATNSHSLAERVRREKISERMKFLQDL 439
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 33/44 (75%), Gaps = 2/44 (4%)
Query: 2 SLVNSHGEAKQAFGESSSDSNEVEFS--GGGGQDEPSTLEGTGG 43
SLV S EAKQ G S ++S+E EFS GGGGQ+EPS LEGTGG
Sbjct: 285 SLVKSLEEAKQGIGVSGNESDEAEFSGGGGGGQEEPSILEGTGG 328
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 64/89 (71%), Gaps = 5/89 (5%)
Query: 10 AKQAFGESSSDSNEVEFSGGGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRAR 69
+ Q GE+S D+ E++ G PS++ N GKQG+Q SD PKEEYIHVRAR
Sbjct: 251 SPQQPGEASKDNPEIQHKG---DQNPSSVPSK--NTGKHGKQGAQASDPPKEEYIHVRAR 305
Query: 70 RGQATNSHSLVERVRREKISERMKFLQNL 98
RGQATNSHSL ERVRREKISERMKFLQ+L
Sbjct: 306 RGQATNSHSLAERVRREKISERMKFLQDL 334
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 45/50 (90%)
Query: 49 GKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
GKQ SQ SD PKEEYIHVRARRGQATNSHSL ERVRREKISERMKFLQ L
Sbjct: 352 GKQASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQEL 401
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 45/50 (90%)
Query: 49 GKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
GKQ SQ SD PKEEYIHVRARRGQATNSHSL ERVRREKISERMKFLQ L
Sbjct: 308 GKQASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQEL 357
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/69 (71%), Positives = 53/69 (76%), Gaps = 3/69 (4%)
Query: 30 GGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKIS 89
GGQ+ ST G +GKQ SQ SD PKEEYIHVRARRGQATNSHSL ERVRREKIS
Sbjct: 308 GGQNPSSTTSKPAGK---QGKQDSQPSDAPKEEYIHVRARRGQATNSHSLAERVRREKIS 364
Query: 90 ERMKFLQNL 98
ERM+ LQ+L
Sbjct: 365 ERMRLLQDL 373
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/69 (71%), Positives = 53/69 (76%), Gaps = 3/69 (4%)
Query: 30 GGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKIS 89
GGQ+ ST G +GKQ SQ SD PKEEYIHVRARRGQATNSHSL ERVRREKIS
Sbjct: 308 GGQNPSSTTSKPAGK---QGKQDSQPSDAPKEEYIHVRARRGQATNSHSLAERVRREKIS 364
Query: 90 ERMKFLQNL 98
ERM+ LQ+L
Sbjct: 365 ERMRLLQDL 373
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 51/63 (80%), Gaps = 4/63 (6%)
Query: 36 STLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFL 95
ST + +G N K GSQ SD PKEEYIHVRARRGQATNSHSL ERVRREKISERMKFL
Sbjct: 195 STAKASGKN----AKLGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFL 250
Query: 96 QNL 98
Q+L
Sbjct: 251 QDL 253
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/49 (89%), Positives = 45/49 (91%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K GSQ SD PKEEYIHVRARRGQATNSHSL ERVRREKISERMKFLQ+L
Sbjct: 342 KLGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDL 390
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/69 (69%), Positives = 52/69 (75%), Gaps = 4/69 (5%)
Query: 30 GGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKIS 89
G Q ST + +G N KQGSQ SD P E Y+HVRARRGQATNSHSL ERVRREKIS
Sbjct: 273 GKQQTSSTAKASGKN----AKQGSQASDPPNEGYVHVRARRGQATNSHSLAERVRREKIS 328
Query: 90 ERMKFLQNL 98
ERMKFLQ+L
Sbjct: 329 ERMKFLQDL 337
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/49 (83%), Positives = 45/49 (91%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+QG Q+SD PK+ YIHVRARRGQATNSHSL ERVRREKISERMKFLQ+L
Sbjct: 287 QQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDL 335
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/49 (83%), Positives = 45/49 (91%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+QG Q+SD PK+ YIHVRARRGQATNSHSL ERVRREKISERMKFLQ+L
Sbjct: 286 QQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDL 334
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/49 (83%), Positives = 45/49 (91%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+QG Q+SD PK+ YIHVRARRGQATNSHSL ERVRREKISERMKFLQ+L
Sbjct: 287 QQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDL 335
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/49 (83%), Positives = 45/49 (91%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+QG Q+SD PK+ YIHVRARRGQATNSHSL ERVRREKISERMKFLQ+L
Sbjct: 287 RQGKQSSDLPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDL 335
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/50 (82%), Positives = 43/50 (86%)
Query: 49 GKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
GKQ + PKEEYIHVRARRGQATNSHSL ERVRREKISERMK+LQNL
Sbjct: 242 GKQTKDNAGSPKEEYIHVRARRGQATNSHSLAERVRREKISERMKYLQNL 291
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/50 (80%), Positives = 43/50 (86%)
Query: 49 GKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
GKQ SD PKE+YIH+RAR GQATNSHSL ERVRREKISERMKFLQ+L
Sbjct: 248 GKQTEDKSDAPKEDYIHIRARSGQATNSHSLAERVRREKISERMKFLQDL 297
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/50 (80%), Positives = 43/50 (86%)
Query: 49 GKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
GKQ SD PKE+YIH+RAR GQATNSHSL ERVRREKISERMKFLQ+L
Sbjct: 246 GKQTEDNSDAPKEDYIHIRARSGQATNSHSLAERVRREKISERMKFLQDL 295
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/50 (80%), Positives = 43/50 (86%)
Query: 49 GKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
GKQ SD PKE+YIH+RAR GQATNSHSL ERVRREKISERMKFLQ+L
Sbjct: 246 GKQTEDNSDAPKEDYIHIRARSGQATNSHSLAERVRREKISERMKFLQDL 295
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/50 (80%), Positives = 43/50 (86%)
Query: 49 GKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
GKQ + PKEEYIHVRARRGQATNSHSL ERVRREKISERMK+LQ+L
Sbjct: 232 GKQAKDNAGSPKEEYIHVRARRGQATNSHSLAERVRREKISERMKYLQDL 281
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 44/49 (89%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K SQT + PKE+YIHVRA+RGQATNSHSL ERVRRE+ISERMKFLQ+L
Sbjct: 230 KMSSQTGEAPKEDYIHVRAKRGQATNSHSLAERVRRERISERMKFLQDL 278
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/50 (78%), Positives = 43/50 (86%)
Query: 49 GKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
GKQ + PKE+YIHVRARRGQATNSHSL ERVRREKISERMK+LQ+L
Sbjct: 241 GKQTKDNAGSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDL 290
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 42/49 (85%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
KQ + PKEEYIHVRARRGQATNSHSL ERVRREKISERMK+LQ+L
Sbjct: 237 KQAKDNAGSPKEEYIHVRARRGQATNSHSLAERVRREKISERMKYLQDL 285
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 44/52 (84%)
Query: 47 LRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
L+G + D PK++YIHVRARRGQAT+SHSL ERVRREKISERMKFLQ+L
Sbjct: 45 LKGATSKRPQDFPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 96
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 54/81 (66%), Gaps = 5/81 (6%)
Query: 18 SSDSNEVEFSGGGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSH 77
+++ N ++ GGQD T N G ++D KE+YIHVRARRGQATNSH
Sbjct: 33 TTNENVLDTKQKGGQDS-----STMANAKPSGTNAKNSTDGAKEDYIHVRARRGQATNSH 87
Query: 78 SLVERVRREKISERMKFLQNL 98
SL ERVRREKISERMKFLQ+L
Sbjct: 88 SLAERVRREKISERMKFLQDL 108
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 52/69 (75%), Gaps = 3/69 (4%)
Query: 30 GGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKIS 89
G + P+T G G + +GK +TS+ KE+YIHVRARRGQATNSHSL ER+RREKIS
Sbjct: 223 GEESSPATTTGPGKS---KGKGAKETSESQKEDYIHVRARRGQATNSHSLAERLRREKIS 279
Query: 90 ERMKFLQNL 98
ERMK LQ+L
Sbjct: 280 ERMKLLQDL 288
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 43/52 (82%)
Query: 47 LRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
L+G D PK++YIHVRARRGQAT+SHSL ERVRREKISERMKFLQ+L
Sbjct: 57 LKGATSKPPQDLPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 108
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/50 (78%), Positives = 43/50 (86%)
Query: 49 GKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
GKQ + PKE+YIHVRARRGQATNSHSL ERVRREKISERMK+LQ+L
Sbjct: 351 GKQIKDNAGSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDL 400
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/50 (78%), Positives = 43/50 (86%)
Query: 49 GKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
GKQ + PKE+YIHVRARRGQATNSHSL ERVRREKISERMK+LQ+L
Sbjct: 243 GKQIKDNAGSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDL 292
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/50 (78%), Positives = 43/50 (86%)
Query: 49 GKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
GKQ + PKE+YIHVRARRGQATNSHSL ERVRREKISERMK+LQ+L
Sbjct: 243 GKQIKDNAGSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDL 292
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/50 (78%), Positives = 43/50 (86%)
Query: 49 GKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
GKQ + PKE+YIHVRARRGQATNSHSL ERVRREKISERMK+LQ+L
Sbjct: 300 GKQIKDNAGSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDL 349
>gi|293336149|ref|NP_001169231.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975699|gb|ACN32037.1| unknown [Zea mays]
gi|414885895|tpg|DAA61909.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 332
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 47/61 (77%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGR 107
+GK +TS+ KE+YIHVRARRGQATNSHSL ER+RREKISERMK LQ+L + G
Sbjct: 235 KGKGARETSESQKEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVGL 294
Query: 108 S 108
S
Sbjct: 295 S 295
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 48/69 (69%), Gaps = 9/69 (13%)
Query: 37 TLEGTGGNLLLRGKQG-------SQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKIS 89
T + T NL RGKQ S + + PKE YIHVRARRGQATNSHSL ERVRREKIS
Sbjct: 208 TEQNTAANL--RGKQAAKQAKENSHSGEAPKENYIHVRARRGQATNSHSLAERVRREKIS 265
Query: 90 ERMKFLQNL 98
ERM+ LQ L
Sbjct: 266 ERMRLLQEL 274
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/51 (74%), Positives = 44/51 (86%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+GK +TS+ KE+YIHVRARRGQATNSHSL ER+RREKISERMK LQ+L
Sbjct: 235 KGKGARETSESQKEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDL 285
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 43/50 (86%)
Query: 49 GKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K+ SQ ++PKE+YIH+RARRGQATNSHSL ERVRREKISERM+ LQ L
Sbjct: 31 NKESSQNEEEPKEKYIHMRARRGQATNSHSLAERVRREKISERMRLLQEL 80
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 55/83 (66%), Gaps = 4/83 (4%)
Query: 20 DSNEVEFSGGGGQDE----PSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATN 75
DSN G Q+E + +E + N +Q S+ S+ PK++YIHVRARRGQAT+
Sbjct: 96 DSNVKRMKISGSQNENGKSKAEVEASSANDKNAAEQNSKISEPPKQDYIHVRARRGQATD 155
Query: 76 SHSLVERVRREKISERMKFLQNL 98
SHSL ER RREKISERMK LQ+L
Sbjct: 156 SHSLAERARREKISERMKILQDL 178
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella
moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella
moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella
moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella
moellendorffii]
Length = 102
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 43/48 (89%)
Query: 51 QGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+ S+ + PK++YIHVRARRGQAT+SHSL ERVRREKISERMKFLQ+L
Sbjct: 1 ENSKPPEPPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 48
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 45/59 (76%), Gaps = 7/59 (11%)
Query: 47 LRGKQ-------GSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
LRGKQ Q+ + PK++YIHVRARRGQATNSHSL ERVRREKISERM+ LQ L
Sbjct: 214 LRGKQVAKQAKDNPQSGEAPKDDYIHVRARRGQATNSHSLAERVRREKISERMRMLQEL 272
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 43/50 (86%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLS 99
K+ SQ+ + PKE YIH+RARRGQATNSHSL ERVRREKISERM+ LQ L+
Sbjct: 190 KESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQELA 239
>gi|356500821|ref|XP_003519229.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 260
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 66/104 (63%), Gaps = 11/104 (10%)
Query: 6 SHGEAKQAFGES------SSDSNEVEFSGGG-GQDEPSTLEGTGGNLLLRGKQGSQT--- 55
+H + + A GE +S +N V+ GGG G+ ++ G GG GK Q+
Sbjct: 62 AHKKPRHAAGEEEESAKGASTTNAVDEGGGGDGKRIKASESGEGGRENSSGKPAEQSGKP 121
Query: 56 -SDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S+ PK++YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 122 PSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKTLQDL 165
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 43/49 (87%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K+ S+ SD K +YIHVRARRGQAT+SHSL ERVRREKISERMK+LQ+L
Sbjct: 175 KENSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 223
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 43/59 (72%), Gaps = 7/59 (11%)
Query: 47 LRGKQ-------GSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
LRGKQ S + PKE YIHVRARRGQATNSHSL ERVRREKISERM+ LQ L
Sbjct: 239 LRGKQPNKHAKDNSSNGEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQEL 297
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 43/49 (87%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K+ S+ SD K +YIHVRARRGQAT+SHSL ERVRREKISERMK+LQ+L
Sbjct: 175 KENSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 223
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 42/49 (85%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K+ SQ+ + PKE YIH+RARRGQATNSHSL ERVRREKISERM+ LQ L
Sbjct: 190 KESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQEL 238
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 42/49 (85%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K+ SQ+ + PKE YIH+RARRGQATNSHSL ERVRREKISERM+ LQ L
Sbjct: 188 KESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQEL 236
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 42/49 (85%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K+ SQ+ + PKE YIH+RARRGQATNSHSL ERVRREKISERM+ LQ L
Sbjct: 138 KESSQSEEAPKENYIHMRARRGQATNSHSLAERVRREKISERMRLLQEL 186
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/40 (87%), Positives = 39/40 (97%)
Query: 59 PKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
PK++YIHVRARRGQAT+SHSL ERVRREKISERMKFLQ+L
Sbjct: 66 PKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 105
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 43/49 (87%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K+ + + D K++YIHVRARRGQAT+SHSL ERVRREKISERMK+LQ+L
Sbjct: 425 KENNSSKDHAKQDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 473
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/45 (82%), Positives = 41/45 (91%)
Query: 54 QTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+TS+ KEEYIHVRARRGQATNSHSL ER+RREKISERMK LQ+L
Sbjct: 236 ETSESQKEEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDL 280
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 36 STLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFL 95
ST+ TG + + K +T + PK+ YIHVRARRGQAT+SHSL ERVRREKISERMKFL
Sbjct: 375 STILSTGESSPKQTKDIVKTPEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKFL 433
Query: 96 QNL 98
Q+L
Sbjct: 434 QDL 436
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/45 (82%), Positives = 41/45 (91%)
Query: 54 QTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+TS+ KEEYIHVRARRGQATNSHSL ER+RREKISERMK LQ+L
Sbjct: 617 ETSESQKEEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDL 661
>gi|168000495|ref|XP_001752951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695650|gb|EDQ81992.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 119
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 47 LRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
L+ + SQ PK+ YIHVRARRGQAT+SHSL ERVRREKISERMKFLQ+L
Sbjct: 7 LKSRSKSQVM-HPKQHYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 57
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 45/60 (75%), Gaps = 8/60 (13%)
Query: 47 LRGKQ--------GSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RGKQ SQ+ + PKE +IHVRARRGQATNSHSL ERVRREKISERM+ LQ L
Sbjct: 236 VRGKQSVKQAKDNNSQSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQEL 295
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 43/49 (87%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+Q Q++D PK+++IHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 135 EQNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDL 183
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 42/48 (87%)
Query: 51 QGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
Q Q++D PK+++IHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 67 QNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDL 114
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 46/56 (82%), Gaps = 1/56 (1%)
Query: 54 QTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEE-TGRS 108
Q SD K+ YIH+RARRGQATNSHSL ERVRREKISERMKFLQ+L ++ TG++
Sbjct: 211 QPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKA 266
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/45 (82%), Positives = 40/45 (88%)
Query: 54 QTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
Q SD K+ YIH+RARRGQATNSHSL ERVRREKISERMKFLQ+L
Sbjct: 156 QASDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDL 200
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 43/49 (87%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+Q Q++D PK+++IHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 135 EQNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQDL 183
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+GK G+ +P ++YIHVRARRG+AT+SHSL ERVRREKIS+RMK LQ+L
Sbjct: 234 QGKDGASKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDL 284
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 55/90 (61%), Gaps = 7/90 (7%)
Query: 9 EAKQAFGESSSDSNEVEFSGGGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRA 68
EAK+ G S D NE + + E + G Q +Q S+ PK++YIHVRA
Sbjct: 81 EAKRLKGMKSGDGNE-------NSNSKTEAEASSGLCNKLADQSNQPSEAPKQDYIHVRA 133
Query: 69 RRGQATNSHSLVERVRREKISERMKFLQNL 98
RRGQAT+SHSL ER RREKISERM LQ+L
Sbjct: 134 RRGQATDSHSLAERARREKISERMNILQDL 163
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 48/69 (69%)
Query: 30 GGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKIS 89
G + P+T G RGK + + KE+YIH+RARRGQATNSHSL ER+RREKIS
Sbjct: 210 GEESSPATTTAGAGPGKSRGKGEKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKIS 269
Query: 90 ERMKFLQNL 98
ERMK LQ+L
Sbjct: 270 ERMKLLQDL 278
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 44/51 (86%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+GK S+ + +P ++Y+HVRARRGQAT+SHSL ERVRREKIS+RMK LQ+L
Sbjct: 156 KGKNSSKPAAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDL 206
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 48/69 (69%)
Query: 30 GGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKIS 89
G + P+T G RGK + + KE+YIH+RARRGQATNSHSL ER+RREKIS
Sbjct: 220 GEESSPATTTAGAGPGKSRGKGEKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKIS 279
Query: 90 ERMKFLQNL 98
ERMK LQ+L
Sbjct: 280 ERMKLLQDL 288
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 44/51 (86%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+GK S+ + +P ++Y+HVRARRGQAT+SHSL ERVRREKIS+RMK LQ+L
Sbjct: 156 KGKNSSKPAAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDL 206
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Query: 18 SSDSNEVEFSGGGGQDEPSTLEGTGGNLLLRGKQGSQT----SDQPKEEYIHVRARRGQA 73
+S +N V+ G G+ ++ G G GK Q+ S+ PK++YIHVRARRGQA
Sbjct: 76 ASTTNAVDEGCGDGKRVKTSESGKGEGESCSGKPAKQSGKPPSEPPKQDYIHVRARRGQA 135
Query: 74 TNSHSLVERVRREKISERMKFLQNL 98
T+SHSL ER RREKISERMK LQ+L
Sbjct: 136 TDSHSLAERARREKISERMKILQDL 160
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/45 (82%), Positives = 40/45 (88%)
Query: 54 QTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
Q SD K+ YIH+RARRGQATNSHSL ERVRREKISERMKFLQ+L
Sbjct: 160 QPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDL 204
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 44/59 (74%), Gaps = 7/59 (11%)
Query: 47 LRGKQG-------SQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
LRGKQ +Q+ + PKE Y HVRARRGQATNSHSL ERVRREKISERM+ LQ L
Sbjct: 137 LRGKQAAKQAKDDTQSGEVPKENYFHVRARRGQATNSHSLAERVRREKISERMRMLQEL 195
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 48/69 (69%)
Query: 30 GGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKIS 89
G + P+T G RGK + + KE+YIH+RARRGQATNSHSL ER+RREKIS
Sbjct: 221 GEESSPATTTAGAGPGKSRGKGEKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKIS 280
Query: 90 ERMKFLQNL 98
ERMK LQ+L
Sbjct: 281 ERMKLLQDL 289
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 45/52 (86%), Gaps = 1/52 (1%)
Query: 48 RGKQGSQ-TSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+ +Q SQ T +QPK++YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 152 KTEQNSQPTPEQPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 203
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 45/61 (73%), Gaps = 9/61 (14%)
Query: 47 LRGKQ---------GSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQN 97
+RGKQ SQ+ + PKE +IHVRARRGQATNSHSL ERVRREKISERM+ LQ
Sbjct: 241 VRGKQSVKQAKDNNNSQSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQE 300
Query: 98 L 98
L
Sbjct: 301 L 301
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/46 (78%), Positives = 40/46 (86%)
Query: 53 SQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S +++ PKE YIHVRARRGQATNSHSL ERVRREKISERM+ LQ L
Sbjct: 219 SNSAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQEL 264
>gi|27311243|gb|AAO00689.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 776
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 44/91 (48%), Positives = 57/91 (62%), Gaps = 9/91 (9%)
Query: 8 GEAKQAFGESSSDSNEVEFSGGGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVR 67
G ++ GE SS + E +G Q E S +E G + + +D +EEY+HVR
Sbjct: 579 GSKRKGSGEGSSSLHSQEETGEMPQRELS-MEHAG--------EKAGDADASREEYVHVR 629
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNL 98
A+RGQATNSHSL ER RREKI+ERMK LQ+L
Sbjct: 630 AKRGQATNSHSLAERFRREKINERMKLLQDL 660
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 13 AFGESSSDSNEVEFSGGGGQDEPST-----LEGTGGNLLLRGKQGSQTSDQPKEEYIHVR 67
A G ++DS G +DE + E + G Q +Q + PK++YIHVR
Sbjct: 1 ARGNDATDSEAKCLKGMKSRDEETANQKXEAEASSGLCNKLADQNTQPLEAPKQDYIHVR 60
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNL 98
ARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 61 ARRGQATDSHSLAERARREKISERMKILQDL 91
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 54/83 (65%), Gaps = 8/83 (9%)
Query: 24 VEFSGGGGQDEPSTLEG-------TGGNLLLRGKQGSQTSDQP-KEEYIHVRARRGQATN 75
++ SG G QD+ L+ GN L +S+QP K++YIHVRARRGQAT+
Sbjct: 50 IKSSGSGSQDQNGALKAGEVDATSVAGNKLPEQTAKPSSSEQPPKQDYIHVRARRGQATD 109
Query: 76 SHSLVERVRREKISERMKFLQNL 98
SHSL ER RREKISERMK LQ++
Sbjct: 110 SHSLAERARREKISERMKILQDI 132
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Query: 5 NSHGEA-KQAFGESSSDSNEVEFSGGGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEY 63
N+ GEA K + G+S D + + + ST G LL + K S++ + KE +
Sbjct: 169 NAEGEALKDSSGKSCDDDVKEQCEKKPRVAQNSTANLCGKQLLKQKKDDSESEEGSKENF 228
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
IHVRARRGQATNSHSL ERVRREKISERM+ LQ L
Sbjct: 229 IHVRARRGQATNSHSLAERVRREKISERMRLLQEL 263
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 41/48 (85%)
Query: 51 QGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+ S +++ PKE YIHVRARRGQATNSHSL ERVRREKISERM+ LQ L
Sbjct: 64 KSSNSAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQEL 111
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 39/41 (95%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++YIHVRARRGQAT+SHSL ERVRREKISERMKFLQ+L
Sbjct: 338 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 378
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 54/83 (65%), Gaps = 8/83 (9%)
Query: 24 VEFSGGGGQDEPSTLEG-------TGGNLLLRGKQGSQTSDQP-KEEYIHVRARRGQATN 75
++ SG G QD+ L+ GN L +S+QP K++YIHVRARRGQAT+
Sbjct: 50 IKSSGSGSQDQNGALKAGEVDATSVAGNKLPEQTAKPSSSEQPPKQDYIHVRARRGQATD 109
Query: 76 SHSLVERVRREKISERMKFLQNL 98
SHSL ER RREKISERMK LQ++
Sbjct: 110 SHSLAERARREKISERMKILQDI 132
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 48/62 (77%), Gaps = 2/62 (3%)
Query: 39 EGTG-GNLLLRGKQGSQTSDQPKE-EYIHVRARRGQATNSHSLVERVRREKISERMKFLQ 96
EGT G + K+ + SD PKE +YIHVRARRGQAT+SHSL ERVRRE+ISERMK+LQ
Sbjct: 103 EGTARGGATSKNKKKASGSDAPKETDYIHVRARRGQATDSHSLAERVRRERISERMKYLQ 162
Query: 97 NL 98
L
Sbjct: 163 EL 164
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 39/41 (95%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++YIHVRARRGQAT+SHSL ERVRREKISERMKFLQ+L
Sbjct: 361 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 401
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 52/70 (74%), Gaps = 6/70 (8%)
Query: 30 GGQDEPSTLEGTGGNLLLRG-KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKI 88
G + P+T TGG +G K+GS+ KE+YIHVRARRGQATNSHSL ER+RREKI
Sbjct: 209 GEESSPATGTTTGGRSKGKGAKEGSE-----KEDYIHVRARRGQATNSHSLAERLRREKI 263
Query: 89 SERMKFLQNL 98
SERMK LQ+L
Sbjct: 264 SERMKLLQDL 273
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis
sativus]
Length = 174
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 43/49 (87%), Gaps = 1/49 (2%)
Query: 51 QGSQ-TSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
Q SQ T +QPK++YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 31 QNSQPTPEQPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 79
>gi|357486401|ref|XP_003613488.1| BHLH transcription factor [Medicago truncatula]
gi|355514823|gb|AES96446.1| BHLH transcription factor [Medicago truncatula]
Length = 239
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 44/52 (84%), Gaps = 2/52 (3%)
Query: 49 GKQGSQTSDQP--KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
GK +TSD+P K++YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 93 GKHAEETSDEPHPKKDYIHVRARRGQATDSHSLAERARREKISERMKTLQDL 144
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 43/51 (84%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+ K+ + +P ++YIHVRARRGQAT+SHSL ERVRREKISERMKFLQ+L
Sbjct: 9 KQKKDNSNPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 59
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 42/50 (84%), Gaps = 5/50 (10%)
Query: 54 QTSDQPK-----EEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
Q+ D PK ++YIHVRARRGQAT+SHSL ERVRREKISERMKFLQ+L
Sbjct: 355 QSKDNPKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 404
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 42/50 (84%), Gaps = 5/50 (10%)
Query: 54 QTSDQPK-----EEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
Q+ D PK ++YIHVRARRGQAT+SHSL ERVRREKISERMKFLQ+L
Sbjct: 355 QSKDNPKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 404
>gi|224066981|ref|XP_002302310.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
gi|222844036|gb|EEE81583.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
Length = 309
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 42/46 (91%)
Query: 53 SQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
++ + +P E+YIHVRAR+GQAT+SHSLVERVRREKISERMK LQNL
Sbjct: 119 NKANSKPPEDYIHVRARKGQATDSHSLVERVRREKISERMKLLQNL 164
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 43/48 (89%), Gaps = 1/48 (2%)
Query: 51 QGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+GS+ +Q K EYIHVRARRGQAT+SHSL ERVRREKISERMK+LQ+L
Sbjct: 197 KGSEVQNQ-KPEYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 243
>gi|108707005|gb|ABF94800.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 809
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 44/91 (48%), Positives = 57/91 (62%), Gaps = 9/91 (9%)
Query: 8 GEAKQAFGESSSDSNEVEFSGGGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVR 67
G ++ GE SS + E +G Q E S +E G + + +D +EEY+HVR
Sbjct: 579 GSKRKGSGEGSSSLHSQEETGEMPQRELS-MEHAG--------EKAGDADASREEYVHVR 629
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNL 98
A+RGQATNSHSL ER RREKI+ERMK LQ+L
Sbjct: 630 AKRGQATNSHSLAERFRREKINERMKLLQDL 660
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 42/49 (85%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+Q +Q + PK++YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 122 EQNTQPPELPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 170
>gi|108707003|gb|ABF94798.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 810
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 44/91 (48%), Positives = 57/91 (62%), Gaps = 9/91 (9%)
Query: 8 GEAKQAFGESSSDSNEVEFSGGGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVR 67
G ++ GE SS + E +G Q E S +E G + + +D +EEY+HVR
Sbjct: 579 GSKRKGSGEGSSSLHSQEETGEMPQRELS-MEHAG--------EKAGDADASREEYVHVR 629
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNL 98
A+RGQATNSHSL ER RREKI+ERMK LQ+L
Sbjct: 630 AKRGQATNSHSLAERFRREKINERMKLLQDL 660
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 42/50 (84%), Gaps = 5/50 (10%)
Query: 54 QTSDQPK-----EEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
Q+ D PK ++YIHVRARRGQAT+SHSL ERVRREKISERMKFLQ+L
Sbjct: 246 QSKDNPKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 295
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 39/41 (95%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++YIHVRARRGQAT+SHSL ERVRREKISERMKFLQ+L
Sbjct: 365 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 405
>gi|224133354|ref|XP_002321546.1| predicted protein [Populus trichocarpa]
gi|222868542|gb|EEF05673.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 42/50 (84%)
Query: 49 GKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+Q S+ S+ PK++YIHVRARRGQAT+SHSL ER RREKISERM LQ+L
Sbjct: 67 AEQSSKPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMNMLQDL 116
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 41/47 (87%)
Query: 52 GSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
G + + +P ++YIHVRARRGQAT+SHSL ERVRREKISERMK LQ+L
Sbjct: 225 GKEVAAEPSKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 271
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/42 (83%), Positives = 39/42 (92%)
Query: 57 DQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
D K++YIHVRARRGQAT+SHSL ERVRREKISERMKFLQ+L
Sbjct: 60 DLSKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 101
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 51 QGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
Q ++ + PK++YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 124 QSNKPCEAPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 171
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+GK S +P ++YIHVRARRG+AT+SHSL ERVRREKIS+RMK LQ+L
Sbjct: 259 QGKDSSSKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDL 309
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/45 (80%), Positives = 40/45 (88%)
Query: 54 QTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+T + KEEYIHVRARRGQATNSHSL ER+RREKISERMK LQ+L
Sbjct: 236 ETYESQKEEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDL 280
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 44/50 (88%)
Query: 49 GKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
G++ ++ ++ PK++YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 127 GEETAKPAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 176
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 41/49 (83%)
Query: 51 QGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLS 99
Q ++ + PK +YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L+
Sbjct: 99 QSNKPCEAPKPDYIHVRARRGQATDSHSLAERARREKISERMKILQDLA 147
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 42/51 (82%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+GK G+ +P ++YIH RARRG+AT+SHSL ERVRREKIS+RMK LQ+L
Sbjct: 234 QGKDGASKPPEPPKDYIHFRARRGEATDSHSLAERVRREKISQRMKLLQDL 284
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 55/76 (72%), Gaps = 6/76 (7%)
Query: 23 EVEFSGGGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVER 82
E E S ++EP +G+G ++ + K S+ + PK+ YIHVRARRGQAT+SHSL ER
Sbjct: 321 ENENSPVKAEEEP---KGSGDDI--QNKANSRPPEPPKD-YIHVRARRGQATDSHSLAER 374
Query: 83 VRREKISERMKFLQNL 98
VRREKISERMK LQ+L
Sbjct: 375 VRREKISERMKLLQDL 390
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 40/47 (85%)
Query: 52 GSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
G S+ PK++YIHVRARRGQAT+SHSL ER RREKISERMK LQ++
Sbjct: 123 GKPPSEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDI 169
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 55/95 (57%), Gaps = 14/95 (14%)
Query: 4 VNSHGEAKQAFGESSSDSNEVEFSGGGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEY 63
V+ + AK++ G +D E G G D + + S +P ++Y
Sbjct: 302 VDDNSNAKRSKGNEKNDVKAEEEHKGNGDD--------------KQNKASTKPPEPPKDY 347
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
IHVRARRGQAT+SHSL ERVRREKISERMK LQ+L
Sbjct: 348 IHVRARRGQATDSHSLAERVRREKISERMKLLQDL 382
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 39/41 (95%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++Y+HVRARRGQAT+SHSL ERVRREKIS+RMKFLQ+L
Sbjct: 149 EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDL 189
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 39/41 (95%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++Y+HVRARRGQAT+SHSL ERVRREKIS+RMKFLQ+L
Sbjct: 148 EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDL 188
>gi|226497606|ref|NP_001151910.1| BHLH transcription factor [Zea mays]
gi|195650891|gb|ACG44913.1| BHLH transcription factor [Zea mays]
Length = 354
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 39/41 (95%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++Y+HVRARRGQAT+SHSL ERVRREKIS+RMKFLQ+L
Sbjct: 149 EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDL 189
>gi|194699354|gb|ACF83761.1| unknown [Zea mays]
Length = 353
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 39/41 (95%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++Y+HVRARRGQAT+SHSL ERVRREKIS+RMKFLQ+L
Sbjct: 149 EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDL 189
>gi|414886196|tpg|DAA62210.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 354
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 39/41 (95%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++Y+HVRARRGQAT+SHSL ERVRREKIS+RMKFLQ+L
Sbjct: 149 EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDL 189
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 43/49 (87%), Gaps = 2/49 (4%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
KQ S+ S++P +YIHVRARRGQAT+SHSL ERVRREKISERM +LQ+L
Sbjct: 180 KQNSKASEKP--DYIHVRARRGQATDSHSLAERVRREKISERMNYLQDL 226
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 42/51 (82%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+GK + +P ++YIHVRARRG+AT+SHSL ERVRREKIS+RMK LQ+L
Sbjct: 262 QGKDSTSKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDL 312
>gi|449450566|ref|XP_004143033.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 40/51 (78%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+ K GSQ PKE YIHV+ARRG+A N+HSL ERVRREKISERMK LQ L
Sbjct: 187 KAKGGSQNVQAPKENYIHVQARRGRAANNHSLAERVRREKISERMKLLQQL 237
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 63/102 (61%), Gaps = 20/102 (19%)
Query: 17 SSSDSNEVEFSGGGGQD--EP-----STLEGTGGNLLLR----------GKQGSQT---S 56
S DS+ + + GGGQD +P T + + N LR GK S++ +
Sbjct: 55 SEEDSSRIVSTSGGGQDLTDPEAKRSKTNKSSNNNGSLRTEAETDPRSAGKAVSKSLPAA 114
Query: 57 DQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+ PK++YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 115 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMKVLQDL 156
>gi|449520908|ref|XP_004167474.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 40/51 (78%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+ K GSQ PKE YIHV+ARRG+A N+HSL ERVRREKISERMK LQ L
Sbjct: 187 KAKGGSQNVQAPKENYIHVQARRGRAANNHSLAERVRREKISERMKLLQQL 237
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+GK S +P ++YIHVRARRG+AT+SHSL ERVRREKIS+RMK LQ+L
Sbjct: 56 QGKDSSSKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDL 106
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 42/49 (85%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K S+ ++ K +YIHVRARRGQAT+SHSL ERVRREKISERMK+LQ+L
Sbjct: 221 KDNSKVTEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 269
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 43/48 (89%), Gaps = 1/48 (2%)
Query: 51 QGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+GS+ +Q K +YIHVRARRGQAT+SHSL ERVRREKISERMK+LQ+L
Sbjct: 178 KGSEVQNQ-KPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 224
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 44/51 (86%), Gaps = 2/51 (3%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+GK ++S+ KE+YIHVRARRGQATNSHSL ER+RREKISERMK LQ+L
Sbjct: 225 KGKGAKESSE--KEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDL 273
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/48 (75%), Positives = 43/48 (89%), Gaps = 1/48 (2%)
Query: 51 QGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+GS+ +Q K +YIHVRARRGQAT+SHSL ERVRREKISERMK+LQ+L
Sbjct: 178 KGSEVQNQ-KPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 224
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+GK S +P ++YIHVRARRG+AT+SHSL ERVRREKIS+RMK LQ+L
Sbjct: 261 QGKDSSSKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDL 311
>gi|414589881|tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 39/41 (95%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++Y+HVRARRGQAT+SHSL ERVRREKIS+RMKFLQ+L
Sbjct: 148 EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDL 188
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 39/44 (88%)
Query: 55 TSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S+ PK++YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 135 ASEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 178
>gi|219363691|ref|NP_001136513.1| uncharacterized protein LOC100216628 [Zea mays]
gi|194695994|gb|ACF82081.1| unknown [Zea mays]
Length = 314
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 39/41 (95%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++Y+HVRARRGQAT+SHSL ERVRREKIS+RMKFLQ+L
Sbjct: 150 EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDL 190
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 48/60 (80%), Gaps = 2/60 (3%)
Query: 39 EGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
EG G + K+GS+ ++P ++YIHVRARRGQAT+SHSL ERVRREKISERM+ LQNL
Sbjct: 112 EGVEGTKSKKQKRGSK--EEPPKDYIHVRARRGQATDSHSLAERVRREKISERMRTLQNL 169
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 53 SQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S+ S+ K +YIHVRARRGQAT+SHSL ERVRREKISERMK+LQ+L
Sbjct: 132 SKVSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 177
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 44/51 (86%), Gaps = 1/51 (1%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+GK+ + ++ P ++YIHVRARRGQAT+SHSL ERVRREKISERMK LQ+L
Sbjct: 15 KGKE-KEVAEDPHKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 64
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 40/46 (86%)
Query: 53 SQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S +P ++YIHVRARRGQAT+SHSL ERVRREKIS+RMKFLQ+L
Sbjct: 340 SSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISKRMKFLQDL 385
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++YIHVRARRGQAT+SHSL ERVRREKISERMK LQ+L
Sbjct: 378 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 418
>gi|363808192|ref|NP_001242485.1| uncharacterized protein LOC100809878 [Glycine max]
gi|255644791|gb|ACU22897.1| unknown [Glycine max]
Length = 224
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 8/89 (8%)
Query: 18 SSDSNEVEFSGGGGQDEPSTLE-------GTGGNLLLRGKQGSQTSDQ-PKEEYIHVRAR 69
S+ + ++ S QD+ L+ GN L + +S+Q PK++YIHVRAR
Sbjct: 43 SASNKHIKLSAPESQDQNGALKVGEVDATSVAGNKLPQQTPKPSSSEQAPKQDYIHVRAR 102
Query: 70 RGQATNSHSLVERVRREKISERMKFLQNL 98
RGQAT++HSL ER RREKISERMK LQ+L
Sbjct: 103 RGQATDNHSLAERARREKISERMKILQDL 131
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 41/51 (80%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+GK+ +P ++YIHVRARRGQAT+SHSL ERVRREKI ERMK LQ+L
Sbjct: 238 KGKELVAADAEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDL 288
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 42/49 (85%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K+ S+ S+ K +YIHVRARRGQAT+SHSL ER RREKISERMK+LQ+L
Sbjct: 233 KENSKASEVQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDL 281
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 42/56 (75%)
Query: 43 GNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
GN + + + PK++YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 105 GNSSKAADKNATPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 160
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 43/51 (84%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+GK + +P ++Y+HVRARRGQAT+SHSL ERVRRE+IS+RMKFLQ+L
Sbjct: 172 KGKGKNAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKFLQDL 222
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 43/51 (84%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+GK G+ +P +++IHVRARRG+AT+SHSL ERVRREKIS+RMK LQ+L
Sbjct: 246 QGKDGASKLPEPPKDFIHVRARRGEATDSHSLAERVRREKISQRMKLLQDL 296
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 53 SQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S+ S+ K +YIHVRARRGQAT+SHSL ERVRREKISERMK+LQ+L
Sbjct: 243 SKVSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 288
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 43/51 (84%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+GK G+ +P +++IHVRARRG+AT+SHSL ERVRREKIS+RMK LQ+L
Sbjct: 246 QGKDGASKLPEPPKDFIHVRARRGEATDSHSLAERVRREKISQRMKLLQDL 296
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++YIHVRARRGQAT+SHSL ERVRREKISERMK LQ+L
Sbjct: 377 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 417
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 42/49 (85%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K+ S+ S+ K +YIHVRARRGQAT+SHSL ER RREKISERMK+LQ+L
Sbjct: 233 KENSKASEVQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDL 281
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella
moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella
moellendorffii]
Length = 158
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 39/41 (95%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++YIHVRARRGQAT+SHSL ERVRREKISERMKFLQ+L
Sbjct: 50 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 90
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++YIHVRARRGQAT+SHSL ERVRREKISERMK LQ+L
Sbjct: 282 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 322
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 39/43 (90%)
Query: 56 SDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
++ PK++YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 116 AEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKVLQDL 158
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 43/51 (84%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+GK + +P ++Y+HVRARRGQAT+SHSL ERVRRE+IS+RMKFLQ+L
Sbjct: 167 KGKGKNAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKFLQDL 217
>gi|125578091|gb|EAZ19313.1| hypothetical protein OsJ_34859 [Oryza sativa Japonica Group]
Length = 311
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++YIHVRARRGQAT+SHSL ERVRREKISERMK LQ+L
Sbjct: 137 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 177
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 55/86 (63%), Gaps = 22/86 (25%)
Query: 28 GGGGQDEPSTLEGTGGNLLLRGKQ-----GSQTSDQ----------PKEEYIHVRARRGQ 72
GGGG ST+E GG L+ + GS SD+ PK++YIHVRARRGQ
Sbjct: 73 GGGG----STVENGGG---LKAAEASSVAGSNNSDEQSTKPSESEPPKQDYIHVRARRGQ 125
Query: 73 ATNSHSLVERVRREKISERMKFLQNL 98
AT+SHS+ ER RREKISERMK LQ+L
Sbjct: 126 ATDSHSIAERARREKISERMKILQDL 151
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++YIHVRARRGQAT+SHSL ERVRREKISERMK LQ+L
Sbjct: 331 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 371
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 41/46 (89%)
Query: 53 SQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S+ ++Q K++YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 129 SKPAEQSKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 174
>gi|116787019|gb|ABK24344.1| unknown [Picea sitchensis]
Length = 467
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 42/51 (82%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+GK+ + Q + YIHVRARRGQAT+SHSL ERVRREKI++RMKFLQ+L
Sbjct: 278 KGKEKNSNVSQKDDNYIHVRARRGQATDSHSLAERVRREKINQRMKFLQDL 328
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 47/60 (78%), Gaps = 2/60 (3%)
Query: 39 EGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
EG G + K+GS+ ++P +YIHVRARRGQAT+SHSL ERVRREKISERM+ LQNL
Sbjct: 111 EGVEGRKSKKQKRGSK--EEPPTDYIHVRARRGQATDSHSLAERVRREKISERMRTLQNL 168
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 42/46 (91%), Gaps = 2/46 (4%)
Query: 53 SQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S+ S++P +YIHVRARRGQAT+SHSL ERVRREKISERMK+LQ+L
Sbjct: 118 SKASEKP--DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 161
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 42/56 (75%)
Query: 43 GNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
GN + + + PK++YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 105 GNSSKAADKNATPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 160
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 41/46 (89%)
Query: 53 SQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S+ ++Q K++YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 144 SKPAEQSKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 189
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/39 (84%), Positives = 38/39 (97%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K++YIHVRARRGQAT+SHSL ERVRREKISERMK+LQ+L
Sbjct: 382 KQDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 420
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 42/48 (87%)
Query: 51 QGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+ S+ ++ PK++YIHVRARRGQAT+SHSL ER RRE+ISERMK LQ+L
Sbjct: 78 KNSKPAEPPKQDYIHVRARRGQATDSHSLAERARRERISERMKILQDL 125
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 39/41 (95%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P+++YIHVRARRGQAT+SHSL ERVRREKISERMK LQ+L
Sbjct: 283 EPQKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 323
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 41/51 (80%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+GK+ +P ++YIHVRARRGQAT+SHSL ERVRREKI ERMK LQ+L
Sbjct: 238 KGKELVAADAEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDL 288
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/39 (84%), Positives = 37/39 (94%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRGQAT+SHSL ERVRREKISERMK+LQ+L
Sbjct: 179 KPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 217
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++YIHVRARRGQAT+SHSL ERVRREKISERMK LQ+L
Sbjct: 364 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 404
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/39 (84%), Positives = 38/39 (97%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K++YIHVRARRGQAT+SHSL ERVRREKISERMK+LQ+L
Sbjct: 48 KQDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 86
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 52 GSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S+ S PK +YIHVRARRGQAT+SHSL ER RREKIS++MK+LQ+L
Sbjct: 176 ASKVSGSPKPDYIHVRARRGQATDSHSLAERARREKISKKMKYLQDL 222
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 52 GSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S+ S PK +YIHVRARRGQAT+SHSL ER RREKIS++MK+LQ+L
Sbjct: 176 ASKVSGSPKPDYIHVRARRGQATDSHSLAERARREKISKKMKYLQDL 222
>gi|326521778|dbj|BAK00465.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 173
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 38/45 (84%)
Query: 54 QTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
Q PK+++IHVRARRGQAT+SHSL ER RREKI+ERMK LQ+L
Sbjct: 108 QNPPPPKQDFIHVRARRGQATDSHSLAERARREKITERMKILQDL 152
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 56 SDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S P ++YIHVRARRGQAT+SHSL ERVRREKISERMK LQ+L
Sbjct: 242 SIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 284
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 56 SDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S P ++YIHVRARRGQAT+SHSL ERVRREKISERMK LQ+L
Sbjct: 248 SIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 290
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 56 SDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S P ++YIHVRARRGQAT+SHSL ERVRREKISERMK LQ+L
Sbjct: 248 SIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 290
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 43/52 (82%)
Query: 47 LRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
++ K+ S D KE+Y+HVRA+RGQATNSHSL ER+RR+KISERMK LQ+L
Sbjct: 128 MQSKEDSSDGDGTKEDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDL 179
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/43 (79%), Positives = 38/43 (88%)
Query: 56 SDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S P ++YIHVRARRGQAT+SHSL ERVRREKISERMK LQ+L
Sbjct: 248 SIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 290
>gi|168024075|ref|XP_001764562.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684140|gb|EDQ70544.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 39/51 (76%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RGK+ PK+ +IHVRARRGQATNSHSL ER RREKIS RMKFLQ L
Sbjct: 1 RGKKVKNKEQPPKQGFIHVRARRGQATNSHSLAERARREKISNRMKFLQAL 51
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K S+ + PK+ YIHVRARRGQAT+SHSL ERVRREKISERMK LQ+L
Sbjct: 239 KANSKPPEAPKD-YIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 286
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 43/52 (82%)
Query: 47 LRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
++ K+ S D KE+Y+HVRA+RGQATNSHSL ER+RR+KISERMK LQ+L
Sbjct: 119 MQSKEDSSDGDGTKEDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDL 170
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/39 (84%), Positives = 37/39 (94%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRGQAT+SHS+ ERVRREKISERMKFLQ+L
Sbjct: 166 KTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDL 204
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 44/58 (75%), Gaps = 7/58 (12%)
Query: 48 RGKQGSQ-------TSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RGK+ S+ T D+P + YIHVRARRGQAT+SHSL ERVRRE+ISERM+ LQ L
Sbjct: 98 RGKKASKEVEEKSTTEDEPPKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQAL 155
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/39 (84%), Positives = 37/39 (94%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRGQAT+SHS+ ERVRREKISERMKFLQ+L
Sbjct: 166 KTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDL 204
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/39 (84%), Positives = 37/39 (94%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRGQAT+SHS+ ERVRREKISERMKFLQ+L
Sbjct: 166 KTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDL 204
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 38/41 (92%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++YIHVRARRGQAT+SHSL ERVRRE+ISERMK LQ+L
Sbjct: 73 EPAKDYIHVRARRGQATDSHSLAERVRRERISERMKLLQSL 113
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K S+ + PK+ YIHVRARRGQAT+SHSL ERVRREKISERMK LQ+L
Sbjct: 201 KANSKPPEAPKD-YIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 248
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/39 (84%), Positives = 37/39 (94%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRGQAT+SHS+ ERVRREKISERMKFLQ+L
Sbjct: 166 KTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDL 204
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/39 (84%), Positives = 37/39 (94%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRGQAT+SHS+ ERVRREKISERMKFLQ+L
Sbjct: 163 KTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDL 201
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 43/52 (82%)
Query: 47 LRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
++ K+ S D KE+Y+H+RA+RGQATNSHSL ER+RR+KISERMK LQ+L
Sbjct: 127 MQSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDL 178
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 43/52 (82%)
Query: 47 LRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
++ K+ S D KE+Y+H+RA+RGQATNSHSL ER+RR+KISERMK LQ+L
Sbjct: 121 MQSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDL 172
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 35/49 (71%), Positives = 42/49 (85%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K S+ ++ K +YIHVRARRGQAT+SHSL ERVRREKISERMK+LQ+L
Sbjct: 218 KDNSKVTEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 266
>gi|224134264|ref|XP_002327796.1| predicted protein [Populus trichocarpa]
gi|222836881|gb|EEE75274.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 41/49 (83%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K+ QTS PK +YIHVRARRGQAT+SHSL ER RREKIS++MK LQ+L
Sbjct: 186 KENQQTSALPKTDYIHVRARRGQATDSHSLAERARREKISKKMKSLQDL 234
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 43/52 (82%)
Query: 47 LRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
++ K+ S D KE+Y+H+RA+RGQATNSHSL ER+RR+KISERMK LQ+L
Sbjct: 119 IQSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDL 170
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/39 (84%), Positives = 37/39 (94%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K++YIHVRARRGQAT+SHSL ERVRREKISERMK LQ+L
Sbjct: 116 KQDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 154
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 43/52 (82%)
Query: 47 LRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
++ K+ S D KE+Y+H+RA+RGQATNSHSL ER+RR+KISERMK LQ+L
Sbjct: 87 MQSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDL 138
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea
mays]
Length = 209
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 43/52 (82%)
Query: 47 LRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
++ K+ S D KE+Y+H+RA+RGQATNSHSL ER+RR+KISERMK LQ+L
Sbjct: 12 IQSKEDSSDGDGTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDL 63
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 2 SLVNSHGEAKQAFGESSSDSNEVEFSGGGGQDEPSTLEGT--GGNLLLRGKQGSQTSDQP 59
+ +++ GE K+ G+ E++ S G G+ E + GT G++ + KQ + +
Sbjct: 98 AYLDAKGECKRPRGKQQV--CELDQSSGRGKPEKAKPAGTRKKGDVAAQ-KQDPRAAGGQ 154
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEE-TGRS 108
K +YIHVRARRGQAT+SHSL ERVRRE+ISERM++LQ L ++ TG++
Sbjct: 155 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKA 204
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 38/41 (92%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++YIHVRARRGQAT+SHSL ERVRRE+ISERMK LQ+L
Sbjct: 103 EPAKDYIHVRARRGQATDSHSLAERVRRERISERMKLLQSL 143
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 40/47 (85%)
Query: 52 GSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
G+ +P ++YIHVRARRG+AT+SHSL ERVRREKIS+RMK LQ+L
Sbjct: 256 GASKLPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDL 302
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 44/55 (80%), Gaps = 4/55 (7%)
Query: 48 RGKQGSQTSDQPKEE----YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
R +QG +++ +P E YIHVRARRG+AT+SHSL ERVRREKIS+RMK LQ+L
Sbjct: 258 RKQQGKESATKPPAEAPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDL 312
>gi|224094803|ref|XP_002310242.1| predicted protein [Populus trichocarpa]
gi|222853145|gb|EEE90692.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 41/49 (83%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K+ +TS PK +YIHVRARRGQAT+SHSL ER RREKIS++MK LQ+L
Sbjct: 21 KENQKTSALPKTDYIHVRARRGQATDSHSLAERARREKISKKMKCLQDL 69
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/40 (80%), Positives = 37/40 (92%)
Query: 59 PKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
PK++YIHVRARRGQAT+SHS+ ER RREKISERMK LQ+L
Sbjct: 105 PKQDYIHVRARRGQATDSHSIAERARREKISERMKMLQDL 144
>gi|357159196|ref|XP_003578371.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 372
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 38/45 (84%)
Query: 54 QTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
Q D+P +Y+HVRARRGQAT+SHSL ERVRREKI+ +MK LQ+L
Sbjct: 165 QADDEPPRDYVHVRARRGQATDSHSLAERVRREKITIKMKMLQDL 209
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++YIHVRARRGQAT+SHSL ERVRREKI ERMK LQ+L
Sbjct: 291 EPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDL 331
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 42/53 (79%), Gaps = 3/53 (5%)
Query: 49 GKQGSQTSDQPKE---EYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
G + ++ S QP E +YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 149 GGKSAEKSSQPPEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 201
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/39 (84%), Positives = 37/39 (94%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRGQAT+SHSL ERVRREKISERMK+LQ+L
Sbjct: 137 KPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 175
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K + +P ++YIHVRARRGQAT+SHSL ERVRREKI ERMK LQ+L
Sbjct: 285 KSNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDL 333
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++YIHVRARRGQAT+SHSL ERVRREKI ERMK LQ+L
Sbjct: 250 EPVKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQSL 290
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K + +P ++YIHVRARRGQAT+SHSL ERVRREKI ERMK LQ+L
Sbjct: 285 KSNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDL 333
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/43 (74%), Positives = 38/43 (88%)
Query: 56 SDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+D +EEY+HVRA+RGQATNSHSL ER RREKI+ERMK LQ+L
Sbjct: 115 ADASREEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDL 157
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 40/50 (80%)
Query: 49 GKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
G Q + PK++YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 119 GDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 168
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 40/50 (80%)
Query: 49 GKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
G Q + PK++YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 119 GDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 168
>gi|168009958|ref|XP_001757672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691366|gb|EDQ77729.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/38 (86%), Positives = 37/38 (97%)
Query: 61 EEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
++YIHVRARRGQAT+SHSL ERVRREKISERMKFLQ+L
Sbjct: 1 QDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDL 38
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 40/50 (80%)
Query: 49 GKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
G Q + PK++YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 117 GDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 166
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 139 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 179
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 39/51 (76%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
R K + ++P Y+HVRARRGQAT+SHSL ERVRREKISERMK LQ L
Sbjct: 154 RPKAVKKVPEEPPTGYVHVRARRGQATDSHSLAERVRREKISERMKMLQRL 204
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella
moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella
moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella
moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella
moellendorffii]
Length = 125
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 46/63 (73%), Gaps = 3/63 (4%)
Query: 36 STLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFL 95
ST T NL GK+ S+ ++YIHVRARRGQAT+SHSL ERVRREKISERMK L
Sbjct: 6 STENTTNSNL---GKENSKPGAGNTQDYIHVRARRGQATDSHSLAERVRREKISERMKTL 62
Query: 96 QNL 98
Q+L
Sbjct: 63 QDL 65
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 38/41 (92%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++YIHVRARRGQAT+SHSL ERVRR++ISERMK LQ+L
Sbjct: 239 EPVKDYIHVRARRGQATDSHSLAERVRRKRISERMKLLQSL 279
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/43 (79%), Positives = 37/43 (86%)
Query: 56 SDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S++P YIHVRARRGQAT+SHSL ERVRREKISERMK LQ L
Sbjct: 161 SEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKLLQAL 203
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 40/50 (80%)
Query: 49 GKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
G Q + PK++YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 78 GDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 127
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 128 EPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 168
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 39/48 (81%)
Query: 51 QGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+G+ +D E YIHVRAR+GQATN HSL ER+RREKISERMK LQ+L
Sbjct: 159 KGASAADGESESYIHVRARKGQATNRHSLAERLRREKISERMKLLQDL 206
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 128 EPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 168
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 128 EPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 168
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 36/39 (92%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRGQAT+SHSL ERVRRE+ISERM++LQ L
Sbjct: 140 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQEL 178
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 38/41 (92%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++Y+HVRARRGQAT+SHSL ERVRRE+IS+RMK LQ+L
Sbjct: 185 EPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDL 225
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 38/41 (92%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++Y+HVRARRGQAT+SHSL ERVRRE+IS+RMK LQ+L
Sbjct: 196 EPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDL 236
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 128 EPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 168
>gi|326496517|dbj|BAJ94720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 261
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 38/44 (86%)
Query: 55 TSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+D+P +Y+HVRARRGQAT+SHSL ERVRREKI+ +MK LQ+L
Sbjct: 57 AADEPPRDYVHVRARRGQATDSHSLAERVRREKITLKMKMLQDL 100
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 122 EPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 162
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 128 EPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 168
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 38/41 (92%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++Y+HVRARRGQAT+SHSL ERVRRE+IS+RMK LQ+L
Sbjct: 196 EPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDL 236
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 38/41 (92%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++Y+HVRARRGQAT+SHSL ERVRRE+IS+RMK LQ+L
Sbjct: 196 EPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDL 236
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 12/83 (14%)
Query: 16 ESSSDSNEVEFSGGGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATN 75
++ SDS+ VE G Q P ++G + +P +Y+HVRARRGQAT+
Sbjct: 156 QAGSDSS-VEDGGAQNQKPPPPVKGKNAKPV-----------EPPRDYVHVRARRGQATD 203
Query: 76 SHSLVERVRREKISERMKFLQNL 98
SHSL ERVRRE+IS+RMK LQ+L
Sbjct: 204 SHSLAERVRRERISQRMKVLQDL 226
>gi|326505424|dbj|BAJ95383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 199
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 40/49 (81%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K+ S D KE Y+H+RA+RGQATNSHSL ER+RR+KISERMK LQ+L
Sbjct: 122 KEDSSDGDGTKENYVHLRAKRGQATNSHSLAERLRRKKISERMKLLQDL 170
>gi|297819388|ref|XP_002877577.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
gi|297323415|gb|EFH53836.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/40 (80%), Positives = 36/40 (90%)
Query: 59 PKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
P ++YIHVRARRGQAT+ HSL ER RREKISERMKFLQ+L
Sbjct: 133 PLKDYIHVRARRGQATDRHSLAERARREKISERMKFLQDL 172
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 39/50 (78%)
Query: 49 GKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K S ++ KE YIHVRA+RGQATNSHSL ERVRRE+ISERM+ LQ L
Sbjct: 217 AKDNSSGAEASKENYIHVRAKRGQATNSHSLAERVRRERISERMRLLQEL 266
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 12/83 (14%)
Query: 16 ESSSDSNEVEFSGGGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATN 75
++ SDS+ VE G Q P ++G + +P +Y+HVRARRGQAT+
Sbjct: 156 QAGSDSS-VEDGGAQNQKPPPPVKGKNAKPV-----------EPPRDYVHVRARRGQATD 203
Query: 76 SHSLVERVRREKISERMKFLQNL 98
SHSL ERVRRE+IS+RMK LQ+L
Sbjct: 204 SHSLAERVRRERISQRMKVLQDL 226
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEE-TGRS 108
+P YIHVRARRGQAT+SHSL ERVRREKISERMK LQ+L ++ TG++
Sbjct: 172 EPPAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKA 223
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEE-TGRS 108
+P YIHVRARRGQAT+SHSL ERVRREKISERMK LQ+L ++ TG++
Sbjct: 172 EPPAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKA 223
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 40/49 (81%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K+ S D KE Y+H+RA+RGQATNSHSL ER+RR+KISERMK LQ+L
Sbjct: 122 KEDSSDGDGTKENYVHLRAKRGQATNSHSLAERLRRKKISERMKLLQDL 170
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 39/46 (84%)
Query: 53 SQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+Q + K++YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 61 TQPPEPSKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 106
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 37/41 (90%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P +Y+HVRARRGQAT+SHSL ERVRRE+IS+RMK LQ+L
Sbjct: 186 EPPRDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDL 226
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 43/54 (79%), Gaps = 4/54 (7%)
Query: 48 RGKQGSQTSDQ---PKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RGK+ ++DQ PK YIHVRARRGQAT+SHSL ERVRRE+ISERM+ LQ L
Sbjct: 105 RGKREKSSTDQEEAPKG-YIHVRARRGQATDSHSLAERVRRERISERMRLLQTL 157
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 50 KQGSQTSDQ-PKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K + DQ P YIHVRARRGQAT+SHSL ERVRREKISERMK LQ L
Sbjct: 155 KDQKKVPDQEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQRL 204
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 37/38 (97%)
Query: 61 EEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
++YIHVRARRGQAT+SHSL ERVRREKISERMK+LQ+L
Sbjct: 1 QDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 38
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 36/39 (92%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRGQAT+SHSL ERVRRE+ISERM++LQ L
Sbjct: 158 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQEL 196
>gi|294462391|gb|ADE76744.1| unknown [Picea sitchensis]
Length = 222
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 40/46 (86%), Gaps = 4/46 (8%)
Query: 57 DQPK----EEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
D+PK ++YIH+R+RRGQATNSHSL ERVRREKISERMK LQ+L
Sbjct: 99 DEPKNKSQKDYIHLRSRRGQATNSHSLAERVRREKISERMKVLQDL 144
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 36/39 (92%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRGQAT+SHSL ERVRRE+ISERM++LQ L
Sbjct: 158 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQEL 196
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 36/39 (92%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRGQAT+SHSL ERVRRE+ISERM++LQ L
Sbjct: 140 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQEL 178
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 37/45 (82%)
Query: 54 QTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+ ++P YIHVRARRGQAT+SHSL ERVRREKISERMK LQ L
Sbjct: 152 KCPEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRL 196
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 37/45 (82%)
Query: 54 QTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+ ++P YIHVRARRGQAT+SHSL ERVRREKISERMK LQ L
Sbjct: 135 KCPEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRL 179
>gi|224119176|ref|XP_002318005.1| predicted protein [Populus trichocarpa]
gi|222858678|gb|EEE96225.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 39/46 (84%)
Query: 53 SQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S+ S+ P ++YIHVR+RRGQAT+SHSL ER RRE+I ERMK LQ+L
Sbjct: 130 SKPSEPPMQDYIHVRSRRGQATDSHSLAERARRERIGERMKILQDL 175
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 36/39 (92%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRGQAT+SHSL ERVRRE+ISERM++LQ L
Sbjct: 147 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQEL 185
>gi|294462520|gb|ADE76806.1| unknown [Picea sitchensis]
Length = 392
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 39/51 (76%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
R + S +P ++YIHVRARRGQAT+ HSL ERVRREKI ERMK LQ+L
Sbjct: 200 RQSEQSAKPPEPPKDYIHVRARRGQATDRHSLAERVRREKIGERMKLLQDL 250
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 36/39 (92%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K++YIHVRARRGQAT+SHSL ER RREKI+ERMK LQ+L
Sbjct: 108 KQDYIHVRARRGQATDSHSLAERARREKITERMKILQDL 146
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 36/39 (92%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRGQAT+SHSL ERVRRE+ISERM++LQ L
Sbjct: 137 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQEL 175
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/41 (78%), Positives = 39/41 (95%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++Y+HVRARRGQAT+SHSL ERVRREKIS+RMKFLQ+L
Sbjct: 148 EPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDL 188
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 36/39 (92%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRGQAT+SHSL ERVRRE+ISERM++LQ L
Sbjct: 158 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQEL 196
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 36/39 (92%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRGQAT+SHSL ERVRRE+ISERM++LQ L
Sbjct: 137 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQEL 175
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/36 (88%), Positives = 34/36 (94%)
Query: 63 YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
YIHVRARRGQAT+SHSL ERVRREKISERMK LQ+L
Sbjct: 161 YIHVRARRGQATDSHSLAERVRREKISERMKMLQSL 196
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/46 (73%), Positives = 41/46 (89%)
Query: 53 SQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S+ ++ K +YIHVRARRGQAT+SHSL ERVRREKISERMK+LQ+L
Sbjct: 154 SKENEDQKLDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDL 199
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 36/39 (92%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRGQAT+SHSL ERVRRE+ISERM++LQ L
Sbjct: 137 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQEL 175
>gi|168024189|ref|XP_001764619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684197|gb|EDQ70601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 59/111 (53%), Gaps = 15/111 (13%)
Query: 13 AFGESSSDSNEVEFSGGGGQDE----PSTL-EGTGGNLLLR---------GKQGSQTSDQ 58
A + S S V F G E PST+ G + LR GK+ +
Sbjct: 83 ATSDVSPTSQGVGFGGVWAMSEASSGPSTVRHPWAGGVRLRVNGVLPGHSGKKVKKKEQP 142
Query: 59 PKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEE-TGRS 108
PK+ +IHVRARRGQAT+ HSL ER RREKIS RMKFLQ L E TG++
Sbjct: 143 PKQGFIHVRARRGQATDGHSLAERARREKISNRMKFLQALVPGCSEVTGKA 193
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/36 (88%), Positives = 34/36 (94%)
Query: 63 YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
YIHVRARRGQAT+SHSL ERVRREKISERMK LQ+L
Sbjct: 150 YIHVRARRGQATDSHSLAERVRREKISERMKILQSL 185
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 36/39 (92%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+E+Y+HVRA+RGQATNSHSL ER RREKI+ERMK LQ+L
Sbjct: 117 REDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDL 155
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 36/39 (92%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRGQAT+SHSL ERVRRE+ISERM++LQ L
Sbjct: 140 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQEL 178
>gi|293333598|ref|NP_001167725.1| uncharacterized protein LOC100381413 [Zea mays]
gi|223943625|gb|ACN25896.1| unknown [Zea mays]
gi|414865638|tpg|DAA44195.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 211
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 36/39 (92%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+E+Y+HVRA+RGQATNSHSL ER RREKI+ERMK LQ+L
Sbjct: 118 REDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDL 156
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 38/46 (82%)
Query: 53 SQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S T D+ + YIHVRARRGQAT+SHSL ERVRRE+ISERM+ LQ L
Sbjct: 109 STTEDEATKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQAL 154
>gi|414865635|tpg|DAA44192.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 185
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 36/39 (92%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+E+Y+HVRA+RGQATNSHSL ER RREKI+ERMK LQ+L
Sbjct: 92 REDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDL 130
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 36/39 (92%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+E+Y+HVRA+RGQATNSHSL ER RREKI+ERMK LQ+L
Sbjct: 118 REDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDL 156
>gi|223945659|gb|ACN26913.1| unknown [Zea mays]
Length = 267
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 36/39 (92%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+E+Y+HVRA+RGQATNSHSL ER RREKI+ERMK LQ+L
Sbjct: 118 REDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDL 156
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/36 (88%), Positives = 33/36 (91%)
Query: 63 YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
YIHVRARRGQAT+SHSL ERVRREKISERMK LQ L
Sbjct: 132 YIHVRARRGQATDSHSLAERVRREKISERMKLLQAL 167
>gi|414865634|tpg|DAA44191.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 262
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 36/39 (92%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+E+Y+HVRA+RGQATNSHSL ER RREKI+ERMK LQ+L
Sbjct: 92 REDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDL 130
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/36 (88%), Positives = 33/36 (91%)
Query: 63 YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
YIHVRARRGQAT+SHSL ERVRREKISERMK LQ L
Sbjct: 142 YIHVRARRGQATDSHSLAERVRREKISERMKILQQL 177
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 37/46 (80%)
Query: 53 SQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S T D+ YIHVRARRGQAT+SHSL ERVRRE+ISERM+ LQ L
Sbjct: 126 SATEDEATRGYIHVRARRGQATDSHSLAERVRRERISERMRMLQAL 171
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 37/46 (80%)
Query: 53 SQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S T D+ YIHVRARRGQAT+SHSL ERVRRE+ISERM+ LQ L
Sbjct: 126 SATEDEATRGYIHVRARRGQATDSHSLAERVRRERISERMRMLQAL 171
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K ++ + PK+ YIHVRARRGQAT+SHSL ER RREKISERM LQ+L
Sbjct: 179 KDDAKPPEAPKD-YIHVRARRGQATDSHSLAERARREKISERMTLLQDL 226
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K ++ + PK+ YIHVRARRGQAT+SHSL ER RREKISERM LQ+L
Sbjct: 176 KDDAKPPEAPKD-YIHVRARRGQATDSHSLAERARREKISERMTLLQDL 223
>gi|414865639|tpg|DAA44196.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 201
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 36/39 (92%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+E+Y+HVRA+RGQATNSHSL ER RREKI+ERMK LQ+L
Sbjct: 148 REDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDL 186
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 34/37 (91%)
Query: 62 EYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 87 DYIHVRARRGQATDSHSLAERARREKISERMKILQDL 123
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 37/46 (80%)
Query: 53 SQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S T D+ YIHVRARRGQAT+SHSL ERVRRE+ISERM+ LQ L
Sbjct: 126 SATEDEATRGYIHVRARRGQATDSHSLAERVRRERISERMRMLQAL 171
>gi|414865636|tpg|DAA44193.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 36/39 (92%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+E+Y+HVRA+RGQATNSHSL ER RREKI+ERMK LQ+L
Sbjct: 122 REDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDL 160
>gi|295913621|gb|ADG58055.1| transcription factor [Lycoris longituba]
Length = 207
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 37/39 (94%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K++YIHVRARRG+AT+SHSL ERVRRE+ISERMK+L+ L
Sbjct: 144 KQDYIHVRARRGEATDSHSLAERVRRERISERMKYLEGL 182
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/36 (88%), Positives = 33/36 (91%)
Query: 63 YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
YIHVRARRGQAT+SHSL ERVRREKISERMK LQ L
Sbjct: 145 YIHVRARRGQATDSHSLAERVRREKISERMKTLQRL 180
>gi|223702428|gb|ACN21645.1| putative basic helix-loop-helix protein BHLH8 [Lotus japonicus]
Length = 309
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/40 (80%), Positives = 33/40 (82%)
Query: 59 PKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
P YIHVRARRGQAT+SHSL ERVRREKISERM LQ L
Sbjct: 112 PSTGYIHVRARRGQATDSHSLAERVRREKISERMNMLQQL 151
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 35/37 (94%)
Query: 62 EYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+Y+HVRARRG+AT+SHSL ER RREKISERMK+LQNL
Sbjct: 2 DYVHVRARRGKATDSHSLAERARREKISERMKYLQNL 38
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/36 (88%), Positives = 33/36 (91%)
Query: 63 YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
YIHVRARRGQAT+SHSL ERVRREKISERMK LQ L
Sbjct: 177 YIHVRARRGQATDSHSLAERVRREKISERMKTLQRL 212
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 35/41 (85%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P YIHVRARRGQAT+SHSL ERVRRE+ISERMK LQ L
Sbjct: 166 EPPAGYIHVRARRGQATDSHSLAERVRRERISERMKILQLL 206
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 34/37 (91%)
Query: 62 EYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+YIHVRARRGQAT+SHSL ER RREKISERMK LQ++
Sbjct: 119 DYIHVRARRGQATDSHSLAERARREKISERMKVLQDI 155
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/45 (73%), Positives = 39/45 (86%)
Query: 54 QTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+ + +P ++YIHVRARRGQAT+SHSL ERVRREKISERMK LQ L
Sbjct: 171 KVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKL 215
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/36 (86%), Positives = 33/36 (91%)
Query: 63 YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 148 YIHVRARRGQATDSHSLAERARREKISERMKILQDL 183
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 35/39 (89%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
KE Y HVRAR+GQATN+HSL ER+RREKISERMK LQ+L
Sbjct: 170 KEGYSHVRARKGQATNNHSLAERLRREKISERMKLLQDL 208
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 48 RGKQGSQTSDQPKEE--YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RG+ + D +E YIHVRARRGQAT+SHSL ERVRRE+ISERM+ LQ L
Sbjct: 100 RGRSSKEVEDDEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQAL 152
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 36/42 (85%)
Query: 57 DQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
D+ + YIHVRARRGQAT+SHSL ERVRRE+ISERM+ LQ L
Sbjct: 122 DEASKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQAL 163
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 34/37 (91%)
Query: 62 EYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+YIHVRARRGQAT+SHSL ER RREKISERMK LQ++
Sbjct: 46 DYIHVRARRGQATDSHSLAERARREKISERMKVLQDI 82
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 42/54 (77%), Gaps = 4/54 (7%)
Query: 49 GKQGSQTSDQPKEE----YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
GK+G + + +EE YIHVRARRGQAT+SHSL ERVRRE+ISERM+ LQ L
Sbjct: 90 GKRGRSSKEVDEEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQAL 143
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/36 (86%), Positives = 33/36 (91%)
Query: 63 YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
YIHVRARRGQAT+SHSL ER RREKISERMK LQ+L
Sbjct: 148 YIHVRARRGQATDSHSLAERARREKISERMKILQDL 183
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 42/54 (77%), Gaps = 4/54 (7%)
Query: 49 GKQGSQTSDQPKEE----YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
GK+G + + +EE YIHVRARRGQAT+SHSL ERVRRE+ISERM+ LQ L
Sbjct: 100 GKRGRSSKEVDEEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQAL 153
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 34/37 (91%)
Query: 62 EYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+YIHVRARRGQAT+SHSL ER RREKISERMK LQ++
Sbjct: 137 DYIHVRARRGQATDSHSLAERARREKISERMKILQDI 173
>gi|224072488|ref|XP_002303756.1| predicted protein [Populus trichocarpa]
gi|222841188|gb|EEE78735.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 49 GKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K+ + +P Y+HVRARRG+AT+SHSL ERVRREKIS RMK LQ+L
Sbjct: 144 AKKQKKVPVEPPTGYVHVRARRGEATDSHSLAERVRREKISSRMKLLQSL 193
>gi|357113290|ref|XP_003558437.1| PREDICTED: transcription factor bHLH74-like [Brachypodium
distachyon]
Length = 296
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 36/39 (92%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+E+Y+H+RA+RGQATN+HSL ER RREKI+ERMK LQ+L
Sbjct: 112 REDYVHIRAKRGQATNNHSLAERFRREKINERMKHLQDL 150
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/36 (83%), Positives = 34/36 (94%)
Query: 63 YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
YIHVRARRGQAT+SHSL ERVRRE+ISERM+ LQ+L
Sbjct: 102 YIHVRARRGQATDSHSLSERVRRERISERMRMLQSL 137
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/39 (79%), Positives = 36/39 (92%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRGQAT+SHSL ERVRRE+ISERM++LQ L
Sbjct: 144 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQEL 182
>gi|225425220|ref|XP_002267465.1| PREDICTED: transcription factor bHLH76-like [Vitis vinifera]
Length = 270
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 34/36 (94%)
Query: 63 YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
++HVRARRG+AT+SHSL ER RREKISERMKFLQ+L
Sbjct: 105 FVHVRARRGEATDSHSLAERARREKISERMKFLQSL 140
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/36 (83%), Positives = 33/36 (91%)
Query: 63 YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
YIHVRARRGQAT+SHSL ERVRRE+ISERM+ LQ L
Sbjct: 106 YIHVRARRGQATDSHSLAERVRRERISERMRVLQAL 141
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/36 (83%), Positives = 32/36 (88%)
Query: 63 YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
YIHVRARRGQAT+SH L ER RREKISERMK LQ+L
Sbjct: 148 YIHVRARRGQATDSHGLAERARREKISERMKILQDL 183
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 35/39 (89%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRGQAT+ HSL ER RREKIS++MK+LQ+L
Sbjct: 181 KLDYIHVRARRGQATDRHSLAERARREKISKKMKYLQDL 219
>gi|223702424|gb|ACN21643.1| putative basic helix-loop-helix protein BHLH6 [Lotus japonicus]
Length = 364
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 55/101 (54%), Gaps = 34/101 (33%)
Query: 28 GGGGQDEPSTLEGTGGNLLLRGKQ----GSQTSDQ----------PKEEYIHVRARRGQA 73
GGGG ST+E GG L + GS SD+ PK++YIHVRARRGQA
Sbjct: 76 GGGG----STVENGGGGGLKAAEASSVAGSNNSDEQSTKPSESEPPKQDYIHVRARRGQA 131
Query: 74 TNSHSLVERV----------------RREKISERMKFLQNL 98
T+SHS+ ERV RREKISERMK LQ+L
Sbjct: 132 TDSHSIAERVIHFSLCLSISYLLLVARREKISERMKILQDL 172
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/38 (84%), Positives = 36/38 (94%)
Query: 61 EEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
++YIHVRARRGQAT+SHSL ERVRREKISERMK LQ+L
Sbjct: 253 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 290
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/38 (84%), Positives = 36/38 (94%)
Query: 61 EEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
++YIHVRARRGQAT+SHSL ERVRREKISERMK LQ+L
Sbjct: 273 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 310
>gi|296088166|emb|CBI35658.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 34/36 (94%)
Query: 63 YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
++HVRARRG+AT+SHSL ER RREKISERMKFLQ+L
Sbjct: 39 FVHVRARRGEATDSHSLAERARREKISERMKFLQSL 74
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 51 QGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+GSQ ++ K Y+HVRARRGQAT+SHSL ER RREKI++RMK LQ L
Sbjct: 168 EGSQQEEE-KLPYVHVRARRGQATDSHSLAERARREKINQRMKLLQEL 214
>gi|414591362|tpg|DAA41933.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 384
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/38 (84%), Positives = 36/38 (94%)
Query: 61 EEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
++YIHVRARRGQAT+SHSL ERVRREKISERMK LQ+L
Sbjct: 273 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 310
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 38/46 (82%), Gaps = 4/46 (8%)
Query: 57 DQPKEE----YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
DQ +EE +IHVRARRGQAT+SHSL ERVRRE+ISERM+ LQ L
Sbjct: 94 DQMEEEAPQGFIHVRARRGQATDSHSLAERVRRERISERMRMLQAL 139
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/39 (79%), Positives = 36/39 (92%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRGQAT+SHSL ERVRRE+ISERM++LQ L
Sbjct: 140 KTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQEL 178
>gi|18398703|ref|NP_565434.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana]
gi|330251658|gb|AEC06752.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 335
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 37/43 (86%)
Query: 56 SDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S+ K +YIHVRARRGQAT+ HSL ER RREKIS++MK+LQ++
Sbjct: 175 SENQKLDYIHVRARRGQATDRHSLAERARREKISKKMKYLQDI 217
>gi|334184293|ref|NP_001189548.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|330251660|gb|AEC06754.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 364
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 37/43 (86%)
Query: 56 SDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S+ K +YIHVRARRGQAT+ HSL ER RREKIS++MK+LQ++
Sbjct: 175 SENQKLDYIHVRARRGQATDRHSLAERARREKISKKMKYLQDI 217
>gi|30680338|ref|NP_849976.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|218563534|sp|Q9ZPW3.3|BH064_ARATH RecName: Full=Transcription factor bHLH64; AltName: Full=Basic
helix-loop-helix protein 64; Short=AtbHLH64; Short=bHLH
64; AltName: Full=Transcription factor EN 79; AltName:
Full=bHLH transcription factor bHLH064
gi|330251659|gb|AEC06753.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 337
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 37/43 (86%)
Query: 56 SDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S+ K +YIHVRARRGQAT+ HSL ER RREKIS++MK+LQ++
Sbjct: 175 SENQKLDYIHVRARRGQATDRHSLAERARREKISKKMKYLQDI 217
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 15 GESSSDSNEVEFSG------GGGQDEPSTLEGTGGNLLLRGKQ----GSQTSDQPKEEYI 64
G S +D V+ +G GGG +P L T + +Q G+ QP
Sbjct: 72 GGSKADRETVQLTGLFPPVFGGGGVQPPNLRPTPPTQVFHPQQSKQGGAAVGPQPPAPRP 131
Query: 65 HVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
VRARRGQAT+ HS+ ER+RRE+I+ERM+ LQ L +T R+
Sbjct: 132 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRA 175
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 15 GESSSDSNEVEFSG------GGGQDEPSTLEGTGGNLLLRGKQ----GSQTSDQPKEEYI 64
G S +D V+ +G GGG +P L T + +Q G+ QP
Sbjct: 72 GGSKADRETVQLTGLFPPVFGGGGVQPPNLRPTPPTQVFHPQQSKQGGAAVGPQPPAPRP 131
Query: 65 HVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
VRARRGQAT+ HS+ ER+RRE+I+ERM+ LQ L +T R+
Sbjct: 132 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRA 175
>gi|20127068|gb|AAM10953.1|AF488597_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 320
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 37/43 (86%)
Query: 56 SDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S+ K +YIHVRARRGQAT+ HSL ER RREKIS++MK+LQ++
Sbjct: 158 SENQKLDYIHVRARRGQATDRHSLAERARREKISKKMKYLQDI 200
>gi|356511528|ref|XP_003524477.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 324
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 35/43 (81%)
Query: 56 SDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
++ P YIHVRARRGQAT+SHSL ERVRREKIS+RM LQ L
Sbjct: 128 AEDPPTGYIHVRARRGQATDSHSLAERVRREKISKRMTTLQRL 170
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 63 YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
YIHVRARRGQAT++HSL ERVRRE+ISERM+ LQ L
Sbjct: 108 YIHVRARRGQATDNHSLAERVRRERISERMRVLQAL 143
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 15 GESSSDSNEVEFSG------GGGQDEPSTLEGTGGNLLLRGKQ----GSQTSDQPKEEYI 64
G S +D V+ +G GGG +P L T + +Q G+ QP
Sbjct: 72 GGSKADRETVQLTGLFRPVFGGGGVQPPNLRPTPPTQVFHPQQSKQGGAAVGPQPPAPRP 131
Query: 65 HVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
VRARRGQAT+ HS+ ER+RRE+I+ERM+ LQ L +T R+
Sbjct: 132 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRA 175
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 63 YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
YIHVRARRGQAT++HSL ERVRRE+ISERM+ LQ L
Sbjct: 108 YIHVRARRGQATDNHSLAERVRRERISERMRVLQAL 143
>gi|15241896|ref|NP_201067.1| transcription factor bHLH79 [Arabidopsis thaliana]
gi|75311612|sp|Q9LV17.1|BH079_ARATH RecName: Full=Transcription factor bHLH79; AltName: Full=Basic
helix-loop-helix protein 79; Short=AtbHLH79; Short=bHLH
79; AltName: Full=Transcription factor EN 81; AltName:
Full=bHLH transcription factor bHLH079
gi|8809657|dbj|BAA97208.1| unnamed protein product [Arabidopsis thaliana]
gi|18175779|gb|AAL59926.1| unknown protein [Arabidopsis thaliana]
gi|21536811|gb|AAM61143.1| unknown [Arabidopsis thaliana]
gi|21689825|gb|AAM67556.1| unknown protein [Arabidopsis thaliana]
gi|332010247|gb|AED97630.1| transcription factor bHLH79 [Arabidopsis thaliana]
Length = 281
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 35/41 (85%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++YIHVRARRGQAT+ HSL ER RREKISE+M LQ++
Sbjct: 145 EPPKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDI 185
>gi|297797231|ref|XP_002866500.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312335|gb|EFH42759.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 282
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 35/41 (85%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++YIHVRARRGQAT+ HSL ER RREKISE+M LQ++
Sbjct: 146 EPPKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDI 186
>gi|297836564|ref|XP_002886164.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332004|gb|EFH62423.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 35/39 (89%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRGQAT+ HSL ER RREKIS++MK+LQ++
Sbjct: 179 KLDYIHVRARRGQATDRHSLAERARREKISKKMKYLQDI 217
>gi|449437607|ref|XP_004136583.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
gi|449501894|ref|XP_004161487.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
Length = 369
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 33/42 (78%)
Query: 57 DQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
D K Y+HVRARRGQAT+SHSL ER RREKI+ RMK LQ L
Sbjct: 192 DAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQEL 233
>gi|224120394|ref|XP_002331037.1| predicted protein [Populus trichocarpa]
gi|222872967|gb|EEF10098.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 32/36 (88%)
Query: 63 YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
Y+HVRARRGQAT+SHSL ER RREKI++RMK LQ L
Sbjct: 174 YVHVRARRGQATDSHSLAERARREKINQRMKLLQEL 209
>gi|413956455|gb|AFW89104.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 239
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 34/39 (87%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+E+Y HVRA+RGQATNSHSL ER RREKI+ RMK LQ+L
Sbjct: 148 REDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDL 186
>gi|225441702|ref|XP_002282897.1| PREDICTED: transcription factor bHLH60 [Vitis vinifera]
gi|297739713|emb|CBI29895.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 32/39 (82%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K Y+HVRARRGQAT+SHSL ER RREKI+ RMK LQ L
Sbjct: 191 KLPYVHVRARRGQATDSHSLAERARREKINARMKLLQEL 229
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 34/39 (87%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
KE Y+HVRAR QATNSHS+ E++RREKISERMK LQ+L
Sbjct: 142 KEGYVHVRARSEQATNSHSIAEKLRREKISERMKLLQDL 180
>gi|390979908|gb|AFM30926.1| basic helix-loop-helix, partial [Vitis vinifera]
Length = 270
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 63 YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
++HVRARRG+AT+SHSL ER RREKISERMK LQ+L
Sbjct: 105 FVHVRARRGEATDSHSLAERARREKISERMKLLQSL 140
>gi|413956454|gb|AFW89103.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 263
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 34/39 (87%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+E+Y HVRA+RGQATNSHSL ER RREKI+ RMK LQ+L
Sbjct: 148 REDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDL 186
>gi|30695836|ref|NP_850745.1| transcription factor bHLH60 [Arabidopsis thaliana]
gi|6729523|emb|CAB67608.1| putative protein [Arabidopsis thaliana]
gi|22655000|gb|AAM98091.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|27764962|gb|AAO23602.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|332646182|gb|AEE79703.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 379
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 32/39 (82%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K Y+HVRARRGQAT+SHSL ER RREKI+ RMK LQ L
Sbjct: 198 KLPYVHVRARRGQATDSHSLAERARREKINARMKLLQEL 236
>gi|20127060|gb|AAM10949.1|AF488593_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 379
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 32/39 (82%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K Y+HVRARRGQAT+SHSL ER RREKI+ RMK LQ L
Sbjct: 198 KLPYVHVRARRGQATDSHSLAERARREKINARMKLLQEL 236
>gi|295913280|gb|ADG57897.1| transcription factor [Lycoris longituba]
Length = 176
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 32/38 (84%)
Query: 61 EEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
E Y+HVRARRGQAT+SHSL ER RREKI+ RMK LQ L
Sbjct: 2 EAYVHVRARRGQATDSHSLAERARREKINARMKLLQEL 39
>gi|255582765|ref|XP_002532159.1| DNA binding protein, putative [Ricinus communis]
gi|223528169|gb|EEF30233.1| DNA binding protein, putative [Ricinus communis]
Length = 190
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 40 GTGGNLLLRGKQG-SQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
G G N RGK+ S+ D+ +E +HVRARRGQAT+SHSL ERVRR KI+ER++ LQ++
Sbjct: 46 GKGKNNSRRGKRTKSKEDDEKPKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDI 105
>gi|30695832|ref|NP_567057.2| transcription factor bHLH60 [Arabidopsis thaliana]
gi|122214701|sp|Q3EAI1.1|BH060_ARATH RecName: Full=Transcription factor bHLH60; AltName: Full=Basic
helix-loop-helix protein 60; Short=AtbHLH60; Short=bHLH
60; AltName: Full=Transcription factor EN 91; AltName:
Full=bHLH transcription factor bHLH060
gi|332646181|gb|AEE79702.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 426
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 32/39 (82%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K Y+HVRARRGQAT+SHSL ER RREKI+ RMK LQ L
Sbjct: 198 KLPYVHVRARRGQATDSHSLAERARREKINARMKLLQEL 236
>gi|147802826|emb|CAN64154.1| hypothetical protein VITISV_000192 [Vitis vinifera]
Length = 270
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 63 YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
++HVRARRG+AT+SHSL ER RREKISERMK LQ+L
Sbjct: 105 FVHVRARRGEATDSHSLAERARREKISERMKLLQSL 140
>gi|297820582|ref|XP_002878174.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324012|gb|EFH54433.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 439
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 32/39 (82%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K Y+HVRARRGQAT+SHSL ER RREKI+ RMK LQ L
Sbjct: 198 KLPYVHVRARRGQATDSHSLAERARREKINARMKLLQEL 236
>gi|312281897|dbj|BAJ33814.1| unnamed protein product [Thellungiella halophila]
Length = 375
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 32/39 (82%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K Y+HVRARRGQAT+SHSL ER RREKI+ RMK LQ L
Sbjct: 194 KLPYVHVRARRGQATDSHSLAERARREKINARMKLLQEL 232
>gi|295913282|gb|ADG57898.1| transcription factor [Lycoris longituba]
Length = 206
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/39 (74%), Positives = 32/39 (82%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K Y+HVRARRGQAT+SHSL ER RREKI+ RMK LQ L
Sbjct: 26 KLPYVHVRARRGQATDSHSLAERARREKINARMKLLQEL 64
>gi|356498448|ref|XP_003518064.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 354
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 31/39 (79%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K Y+HVR RRGQAT+SHSL ER RREKI+ RMK LQ L
Sbjct: 182 KLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQEL 220
>gi|356504821|ref|XP_003521193.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 372
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 31/39 (79%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K Y+HVR RRGQAT+SHSL ER RREKI+ RMK LQ L
Sbjct: 200 KLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQEL 238
>gi|356534621|ref|XP_003535851.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 357
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 31/39 (79%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K Y+HVR RRGQAT+SHSL ER RREKI+ RMK LQ L
Sbjct: 186 KLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQEL 224
>gi|363808336|ref|NP_001242250.1| transcription factor bHLH48-like [Glycine max]
gi|256002927|gb|ACU52707.1| bHLH transcription factor PTF1 [Glycine max]
Length = 366
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 31/39 (79%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K Y+HVR RRGQAT+SHSL ER RREKI+ RMK LQ L
Sbjct: 194 KLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQEL 232
>gi|79324891|ref|NP_001031530.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|330255009|gb|AEC10103.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 233
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 32/39 (82%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K Y+HVRARRGQAT++HSL ER RREKI+ RMK LQ L
Sbjct: 179 KLPYVHVRARRGQATDNHSLAERARREKINARMKLLQEL 217
>gi|224057820|ref|XP_002299340.1| predicted protein [Populus trichocarpa]
gi|222846598|gb|EEE84145.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 33/36 (91%)
Query: 63 YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
Y+HVRARRG+AT+SHSL ERVRRE+IS +MK LQ+L
Sbjct: 74 YVHVRARRGEATDSHSLAERVRRERISAKMKLLQSL 109
>gi|357509815|ref|XP_003625196.1| Transcription factor bHLH60 [Medicago truncatula]
gi|124360133|gb|ABN08149.1| Helix-loop-helix DNA-binding [Medicago truncatula]
gi|355500211|gb|AES81414.1| Transcription factor bHLH60 [Medicago truncatula]
Length = 340
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 31/39 (79%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K Y+HVR RRGQAT+SHSL ER RREKI+ RMK LQ L
Sbjct: 167 KLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQEL 205
>gi|413954820|gb|AFW87469.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 359
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 33/42 (78%)
Query: 57 DQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
D K Y+HVRARRGQAT+SHSL ER RREKI+ RM+ L+ L
Sbjct: 171 DDEKPAYVHVRARRGQATDSHSLAERARREKINARMELLKEL 212
>gi|413954819|gb|AFW87468.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 372
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 33/42 (78%)
Query: 57 DQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
D K Y+HVRARRGQAT+SHSL ER RREKI+ RM+ L+ L
Sbjct: 184 DDEKPAYVHVRARRGQATDSHSLAERARREKINARMELLKEL 225
>gi|11761480|gb|AAG28811.2|AC079374_14 helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
Length = 166
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 36/41 (87%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
Q ++ +HVRA+RGQAT+SHSL ERVRREKI+ER+K LQ+L
Sbjct: 39 QKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDL 79
>gi|51969310|dbj|BAD43347.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|51970180|dbj|BAD43782.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
Length = 327
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 32/39 (82%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K Y+HVRARRGQAT++HSL ER RREKI+ RMK LQ L
Sbjct: 179 KLPYVHVRARRGQATDNHSLAERARREKINARMKLLQEL 217
>gi|30688981|ref|NP_850368.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|75304461|sp|Q8VZ02.1|BH048_ARATH RecName: Full=Transcription factor bHLH48; AltName: Full=Basic
helix-loop-helix protein 48; Short=AtbHLH48; Short=bHLH
48; AltName: Full=Transcription factor EN 97; AltName:
Full=bHLH transcription factor bHLH048
gi|17529250|gb|AAL38852.1| unknown protein [Arabidopsis thaliana]
gi|20465971|gb|AAM20171.1| unknown protein [Arabidopsis thaliana]
gi|51971465|dbj|BAD44397.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|330255008|gb|AEC10102.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 327
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 32/39 (82%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K Y+HVRARRGQAT++HSL ER RREKI+ RMK LQ L
Sbjct: 179 KLPYVHVRARRGQATDNHSLAERARREKINARMKLLQEL 217
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 41/58 (70%)
Query: 41 TGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
T N RGK+ ++ E +HVRARRGQAT+SHS+ ERVRR KI+ER+K LQ++
Sbjct: 124 TKNNSSRRGKRSKNREEEKDREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDI 181
>gi|18395643|ref|NP_564229.1| transcription factor bHLH75 [Arabidopsis thaliana]
gi|218563498|sp|A4D998.1|BH075_ARATH RecName: Full=Transcription factor bHLH75; AltName: Full=Basic
helix-loop-helix protein 75; Short=AtbHLH75; Short=bHLH
75; AltName: Full=Transcription factor EN 78; AltName:
Full=bHLH transcription factor bHLH075
gi|21618141|gb|AAM67191.1| helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
gi|51969656|dbj|BAD43520.1| putative bHLH transcription factor (bHLH075) [Arabidopsis thaliana]
gi|91805851|gb|ABE65654.1| basic helix-loop-helix family protein [Arabidopsis thaliana]
gi|332192486|gb|AEE30607.1| transcription factor bHLH75 [Arabidopsis thaliana]
Length = 223
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 36/41 (87%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
Q ++ +HVRA+RGQAT+SHSL ERVRREKI+ER+K LQ+L
Sbjct: 96 QKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDL 136
>gi|116830915|gb|ABK28414.1| unknown [Arabidopsis thaliana]
Length = 224
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 36/41 (87%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
Q ++ +HVRA+RGQAT+SHSL ERVRREKI+ER+K LQ+L
Sbjct: 96 QKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDL 136
>gi|357440189|ref|XP_003590372.1| Transcription factor BEE [Medicago truncatula]
gi|355479420|gb|AES60623.1| Transcription factor BEE [Medicago truncatula]
Length = 326
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 30/36 (83%)
Query: 63 YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
Y+HVR RRGQAT+SHSL ER RREKI+ RMK LQ L
Sbjct: 157 YVHVRVRRGQATDSHSLAERARREKINARMKLLQEL 192
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 34/39 (87%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRG+AT+ HSL ER RREKIS++MK LQ++
Sbjct: 135 KPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDI 173
>gi|297824189|ref|XP_002879977.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
gi|297325816|gb|EFH56236.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 32/39 (82%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K Y+HVRARRGQAT++HSL ER RREKI+ RMK LQ L
Sbjct: 178 KLPYVHVRARRGQATDNHSLAERARREKINARMKLLQEL 216
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 34/39 (87%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRG+AT+ HSL ER RREKIS++MK LQ++
Sbjct: 131 KPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDI 169
>gi|357130181|ref|XP_003566729.1| PREDICTED: uncharacterized protein LOC100831834 [Brachypodium
distachyon]
Length = 298
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 32/36 (88%)
Query: 63 YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
YIHVRA+RGQA +SHSL ERVRREKISE+M LQ+L
Sbjct: 154 YIHVRAKRGQARDSHSLAERVRREKISEKMLLLQSL 189
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 34/39 (87%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRG+AT+ HSL ER RREKIS++MK LQ++
Sbjct: 119 KPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDI 157
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 34/39 (87%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRG+AT+ HSL ER RREKIS++MK LQ++
Sbjct: 135 KPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDI 173
>gi|255543172|ref|XP_002512649.1| conserved hypothetical protein [Ricinus communis]
gi|223548610|gb|EEF50101.1| conserved hypothetical protein [Ricinus communis]
Length = 297
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 36/49 (73%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K+ + P Y+HVRARRG+AT+ HSL ERVRR+KIS RMK LQ+L
Sbjct: 148 KEKKVAKEHPLTGYVHVRARRGEATDPHSLAERVRRKKISVRMKLLQSL 196
>gi|357500329|ref|XP_003620453.1| Transcription factor BEE [Medicago truncatula]
gi|355495468|gb|AES76671.1| Transcription factor BEE [Medicago truncatula]
Length = 263
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
Query: 48 RGK--QGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RGK + +T ++ +E +HVRARRGQAT+SHSL ERVRR KI+E++K LQN+
Sbjct: 135 RGKRVKSYETEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLKCLQNI 187
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 34/39 (87%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRG+AT+ HSL ER RREKIS++MK LQ++
Sbjct: 135 KPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDI 173
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 34/39 (87%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRG+AT+ HSL ER RREKIS++MK LQ++
Sbjct: 119 KPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDI 157
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 34/39 (87%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRG+AT+ HSL ER RREKIS++MK LQ++
Sbjct: 135 KPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDI 173
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 34/39 (87%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRG+AT+ HSL ER RREKIS++MK LQ++
Sbjct: 135 KPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDI 173
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 34/39 (87%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K +YIHVRARRG+AT+ HSL ER RREKIS++MK LQ++
Sbjct: 135 KPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDI 173
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 30 GGQDEPSTLEGTGGNLLLRGKQ----GSQTSDQPKEEYIHVRARRGQATNSHSLVERVRR 85
GG +P L T + +Q G+ QP VRARRGQAT+ HS+ ER+RR
Sbjct: 84 GGGVQPPHLRATPPTQVFHAQQPKQGGAAVGPQPPAPRPKVRARRGQATDPHSIAERLRR 143
Query: 86 EKISERMKFLQNLSLAIEETGRS 108
E+I+ERM+ LQ L +T R+
Sbjct: 144 ERIAERMRALQELVPNTNKTDRA 166
>gi|168024073|ref|XP_001764561.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684139|gb|EDQ70543.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 62
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/33 (87%), Positives = 32/33 (96%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+SHSL ERVRREKISERMK+LQ+L
Sbjct: 1 VRARRGQATDSHSLAERVRREKISERMKYLQDL 33
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 13 AFGESSSDSNEVEFSGGGGQDEPSTLEGTGG--NLLLRGKQGSQT------------SDQ 58
A E+ D + V+ +G P G GG LRG Q + Q
Sbjct: 53 AAAEAKPDRDPVQLAGLF----PPVFAGAGGVHQPHLRGPPPPQMFQAQPKPGEGGMAPQ 108
Query: 59 PKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
P VRARRGQAT+ HS+ ER+RRE+I+ERM+ LQ L +T R+
Sbjct: 109 PPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRA 158
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 13 AFGESSSDSNEVEFSGGGGQDEPSTLEGTGG--NLLLRGKQGSQT------------SDQ 58
A E D + V+ +G P G GG LRG Q + Q
Sbjct: 52 AAAEPKPDRDPVQLAGLF----PPVFAGAGGVQQPHLRGPPPPQMFQAQPKPGEGGMAPQ 107
Query: 59 PKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
P VRARRGQAT+ HS+ ER+RRE+I+ERM+ LQ L +T R+
Sbjct: 108 PPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRA 157
>gi|413943655|gb|AFW76304.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 370
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 32/39 (82%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K Y+HVRARRGQAT+SHSL ER RREKI+ RM+ L+ L
Sbjct: 151 KPAYVHVRARRGQATDSHSLAERARREKINARMELLKEL 189
>gi|225424017|ref|XP_002279412.1| PREDICTED: transcription factor bHLH75 [Vitis vinifera]
Length = 258
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
R + + +++P+E IHVRA+RGQAT+SHSL ERVRREKI+E+++ LQ+L
Sbjct: 123 RKRSNERENNKPRE-VIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDL 172
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Query: 26 FSGGGGQDEPSTLEGTGGNLLLRGKQ----GSQTSDQPKEEYIHVRARRGQATNSHSLVE 81
FSGG +P L + R +Q G+ QP VRARRGQAT+ HS+ E
Sbjct: 81 FSGG---VQPPHLRPNPPTQVFRAQQPKQGGAGVGPQPPAPRPKVRARRGQATDPHSIAE 137
Query: 82 RVRREKISERMKFLQNLSLAIEETGRS 108
R+RRE+I+ERM+ LQ L +T R+
Sbjct: 138 RLRRERIAERMRALQELVPNTNKTDRA 164
>gi|297737801|emb|CBI27002.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEET 105
R + + +++P+E IHVRA+RGQAT+SHSL ERVRREKI+E+++ LQ+L +T
Sbjct: 106 RKRSNERENNKPRE-VIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKT 162
>gi|225455954|ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis vinifera]
gi|297734215|emb|CBI15462.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
R + + D+ E +HVRARRGQAT+SHSL ERVRR KI+ER++ LQ++
Sbjct: 129 RAMKSIEKEDEKPREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDI 179
>gi|147773703|emb|CAN76460.1| hypothetical protein VITISV_010828 [Vitis vinifera]
Length = 237
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEET 105
R + + +++P+E IHVRA+RGQAT+SHSL ERVRREKI+E+++ LQ+L +T
Sbjct: 102 RKRSNERENNKPRE-VIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKT 158
>gi|356527821|ref|XP_003532505.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 252
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 41/53 (77%), Gaps = 2/53 (3%)
Query: 48 RGKQGSQTS--DQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RGK+ + S D+ E +HVRA+RGQAT+SHSL ERVRR KI+E+++ LQN+
Sbjct: 113 RGKRVKRNSIEDKKPNEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNI 165
>gi|147797633|emb|CAN71939.1| hypothetical protein VITISV_038910 [Vitis vinifera]
Length = 381
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERV--RREKISERMKFLQNLSLAIE 103
K SQT + PKE+YIHVRA+RGQATNSHSL ER+ + + E + ++Q+L +E
Sbjct: 230 KMSSQTGEAPKEDYIHVRAKRGQATNSHSLAERITGKAVMLDEIINYVQSLQRQVE 285
>gi|357117653|ref|XP_003560578.1| PREDICTED: transcription factor bHLH48-like [Brachypodium
distachyon]
Length = 259
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 32/39 (82%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K Y+HVRARRGQAT+SHSL ER RREKI+ RM+ L+ L
Sbjct: 74 KPAYVHVRARRGQATDSHSLAERARREKINARMELLKEL 112
>gi|218198545|gb|EEC80972.1| hypothetical protein OsI_23697 [Oryza sativa Indica Group]
Length = 286
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 32/39 (82%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K Y+HVRARRGQAT+SHSL ER RREKI+ RM+ L+ L
Sbjct: 101 KPAYVHVRARRGQATDSHSLAERARREKINARMELLKEL 139
>gi|222635879|gb|EEE66011.1| hypothetical protein OsJ_21966 [Oryza sativa Japonica Group]
Length = 325
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 32/39 (82%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K Y+HVRARRGQAT+SHSL ER RREKI+ RM+ L+ L
Sbjct: 140 KPAYVHVRARRGQATDSHSLAERARREKINARMELLKEL 178
>gi|119655907|gb|ABL86246.1| BHLHogu [Brassica rapa subsp. chinensis]
Length = 122
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 32/39 (82%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K Y+HVRARRGQAT+SHSL ER RREKI+ RMK L+ L
Sbjct: 27 KLPYVHVRARRGQATDSHSLAERARREKINARMKLLREL 65
>gi|356529573|ref|XP_003533364.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 273
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
Query: 48 RGK--QGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RGK + + T ++ +E +HVRARRGQAT+SHSL ERVRR KI+E+++ LQN+
Sbjct: 136 RGKRVKSNVTEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLRCLQNI 188
>gi|89257428|gb|ABD64920.1| bHLH transcription factor, putative [Brassica oleracea]
Length = 155
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P ++YIHVRARRGQ +SH ERVRREKISE + LQ+L
Sbjct: 13 EPPKDYIHVRARRGQPADSHRFAERVRREKISEMLTLLQDL 53
>gi|147810591|emb|CAN71967.1| hypothetical protein VITISV_017400 [Vitis vinifera]
Length = 271
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 36/42 (85%), Gaps = 1/42 (2%)
Query: 57 DQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
D+P +E IHVRARRGQAT++HS+ ERVRREKI R++ LQ+L
Sbjct: 140 DKP-DEVIHVRARRGQATDNHSIAERVRREKIKTRLRCLQDL 180
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEET 105
R K+G + E +HVRARRGQAT+SHS+ ER+RR KI+ER++ LQ++ +T
Sbjct: 135 RSKKGDTNDGEKPREVVHVRARRGQATDSHSVAERIRRGKINERLRCLQDIVPGCYKT 192
>gi|356520601|ref|XP_003528950.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 272
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
Query: 48 RGK--QGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RGK + + T ++ +E +HVRARRGQAT+SHSL ERVRR KI+E+++ LQN+
Sbjct: 135 RGKRVKSNVTEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLRCLQNI 187
>gi|223702430|gb|ACN21646.1| putative basic helix-loop-helix protein BHLH5 [Lotus japonicus]
gi|388495576|gb|AFK35854.1| unknown [Lotus japonicus]
Length = 268
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 35/42 (83%)
Query: 57 DQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
D+ + +HVRARRGQAT+SHSL ERVRR KI+E++K LQN+
Sbjct: 143 DKKSTQVVHVRARRGQATDSHSLAERVRRGKINEKLKCLQNI 184
>gi|296087271|emb|CBI33645.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 36/42 (85%), Gaps = 1/42 (2%)
Query: 57 DQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
D+P +E IHVRARRGQAT++HS+ ERVRREKI R++ LQ+L
Sbjct: 194 DKP-DEVIHVRARRGQATDNHSIAERVRREKIKTRLRCLQDL 234
>gi|224118802|ref|XP_002317910.1| predicted protein [Populus trichocarpa]
gi|222858583|gb|EEE96130.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RGK D ++ +HVRARRGQAT+SHSL ERVRR KI+ER++ LQ++
Sbjct: 138 RGKGVKSNEDGKPKDVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDI 188
>gi|224127674|ref|XP_002329336.1| predicted protein [Populus trichocarpa]
gi|222870790|gb|EEF07921.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 34/38 (89%)
Query: 61 EEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
EE IHVRA+RGQAT+SHS+ ERVRREKI+ +++ LQ+L
Sbjct: 143 EEVIHVRAKRGQATDSHSIAERVRREKINNKLRCLQDL 180
>gi|255572100|ref|XP_002526990.1| DNA binding protein, putative [Ricinus communis]
gi|223533625|gb|EEF35362.1| DNA binding protein, putative [Ricinus communis]
Length = 189
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 38/42 (90%), Gaps = 1/42 (2%)
Query: 57 DQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
++PKE IHVRA+RGQAT+SHSL ERVRRE+I+E+++ LQ+L
Sbjct: 113 EKPKE-VIHVRAKRGQATDSHSLAERVRRERINEKLRCLQDL 153
>gi|356513103|ref|XP_003525253.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 246
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 48 RGK--QGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RGK + + D+ E +HVRA+RGQAT+SHSL ERVRR KI+E+++ LQN+
Sbjct: 107 RGKRVKRNMIEDKKPNEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNI 159
>gi|125526612|gb|EAY74726.1| hypothetical protein OsI_02617 [Oryza sativa Indica Group]
Length = 386
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 38/73 (52%), Gaps = 32/73 (43%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVER--------------------------------VRR 85
+P ++YIHVRARRGQAT+SHSL ER VRR
Sbjct: 149 EPPKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSILAFADAIAAVFHLQVRR 208
Query: 86 EKISERMKFLQNL 98
EKISERMK LQ+L
Sbjct: 209 EKISERMKLLQDL 221
>gi|3540186|gb|AAC34336.1| Hypothetical protein [Arabidopsis thaliana]
Length = 339
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Query: 50 KQGSQTSDQPKEEYIHVRARRGQATNSHSLVERV--RREKISERMKFLQNLSLAIE 103
K+ SQ+ + PKE YIH+RARRGQATNSHSL ER+ + + E + ++Q+L +E
Sbjct: 190 KESSQSEEAPKENYIHMRARRGQATNSHSLAERITGKAVMLDEIINYVQSLQQQVE 245
>gi|147818198|emb|CAN60403.1| hypothetical protein VITISV_034133 [Vitis vinifera]
Length = 484
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 41/66 (62%), Gaps = 9/66 (13%)
Query: 47 LRGKQ-------GSQTSDQPKEEYIHVRARRGQATNSHSLVERV--RREKISERMKFLQN 97
LRGKQ S + PKE YIHVRARRGQATNSHSL ER+ + + E + ++Q+
Sbjct: 239 LRGKQPNKHAKDNSSNGEAPKENYIHVRARRGQATNSHSLAERITGKAVMLDEIINYVQS 298
Query: 98 LSLAIE 103
L +E
Sbjct: 299 LQQQVE 304
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 37/51 (72%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
QP + VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L + +T R+
Sbjct: 149 QPPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRA 199
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 37/51 (72%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
QP + VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L + +T R+
Sbjct: 50 QPPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRA 100
>gi|224135389|ref|XP_002322061.1| predicted protein [Populus trichocarpa]
gi|222869057|gb|EEF06188.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 33/37 (89%)
Query: 62 EYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
E +HVRARRGQAT+SHSL ERVRR KI+ER++ LQ++
Sbjct: 153 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDI 189
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Query: 52 GSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
G+ + QPK++ VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L +T ++
Sbjct: 235 GTTPAAQPKQQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKA 289
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 37/51 (72%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
QP VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L +I +T R+
Sbjct: 161 QPPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRA 211
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 53 SQTSDQPKEEYIH--VRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
S T P + IH VRARRGQAT+ HS+ ER+RRE+ISER+K LQ L +T R+
Sbjct: 119 STTVTIPHQPAIHPRVRARRGQATDPHSIAERLRRERISERIKALQELVPNCNKTDRA 176
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 37/51 (72%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
QP VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L +I +T R+
Sbjct: 158 QPPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRA 208
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RGK+ ++ + E +HVRARRGQAT+SHS+ ERVRR KI+ER+K LQ++
Sbjct: 129 RGKRSKNREEEKEREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDI 179
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RGK+ ++ + E +HVRARRGQAT+SHS+ ERVRR KI+ER+K LQ++
Sbjct: 129 RGKRSKNREEEKEREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDI 179
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 32/35 (91%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+HVRARRGQAT+SHSL ERVRR KI+ER++ LQ++
Sbjct: 143 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDM 177
>gi|297844782|ref|XP_002890272.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
gi|297336114|gb|EFH66531.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
Length = 1143
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 32/35 (91%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+HVRARRGQAT+SHSL ERVRR KI+ER++ LQ++
Sbjct: 1026 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDM 1060
>gi|341941279|gb|AEL12217.1| putative cryptochrome-interacting basic helix-loop-helix 5 [Beta
vulgaris]
Length = 225
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 35/43 (81%)
Query: 63 YIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEET 105
+++VRARRG+A +SHSL ERVRR+KIS +MK LQ+L ++T
Sbjct: 133 FVYVRARRGEAVDSHSLAERVRRQKISSKMKLLQSLVPGCDKT 175
>gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
Length = 1154
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 32/35 (91%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+HVRARRGQAT+SHSL ERVRR KI+ER++ LQ++
Sbjct: 1037 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDM 1071
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 48 RGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RGK+ ++ + E +HVRARRGQAT+SHS+ ERVRR KI+ER+K LQ++
Sbjct: 118 RGKRSKNREEEKEREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDI 168
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 53 SQTSDQPKEEYIH--VRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
S + QP I VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L + +T R+
Sbjct: 154 SAVAAQPHPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDRA 211
>gi|4567302|gb|AAD23713.1| unknown protein [Arabidopsis thaliana]
Length = 226
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 33/47 (70%), Gaps = 8/47 (17%)
Query: 60 KEEYIHVRARRGQATNSHSLVERV--------RREKISERMKFLQNL 98
K Y+HVRARRGQAT++HSL ERV RREKI+ RMK LQ L
Sbjct: 123 KLPYVHVRARRGQATDNHSLAERVIHNLTDMARREKINARMKLLQEL 169
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%)
Query: 28 GGGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREK 87
GG + GG ++ + + T P + VRARRGQAT+ HS+ ER+RRE+
Sbjct: 218 GGAAAMQAQNFGSPGGAMMNQPQASGSTGGAPAQPRQRVRARRGQATDPHSIAERLRRER 277
Query: 88 ISERMKFLQNL 98
I+ERMK LQ L
Sbjct: 278 IAERMKALQEL 288
>gi|449439537|ref|XP_004137542.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449532109|ref|XP_004173026.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 265
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 33/37 (89%)
Query: 62 EYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
E +HVRARRGQAT+SHSL ERVRR KI+ER++ L+++
Sbjct: 144 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLKDI 180
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%)
Query: 56 SDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
+ QP VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L +T R+
Sbjct: 153 ASQPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPTANKTDRA 205
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 53 SQTSDQPKEEYIH--VRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
S + QP I VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L + +T R+
Sbjct: 84 SAVAAQPHPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDRA 141
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 36/51 (70%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
QP VRARRGQAT+ HS+ ER+RRE+ISER+K LQ L + +T R+
Sbjct: 133 QPPSIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNKTDRA 183
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 34/41 (82%), Gaps = 3/41 (7%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
QPK++ VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 199 QPKQK---VRARRGQATDPHSIAERLRRERIAERMKALQEL 236
>gi|224079313|ref|XP_002305819.1| predicted protein [Populus trichocarpa]
gi|222848783|gb|EEE86330.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 34/38 (89%)
Query: 61 EEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+E IHVRA+RGQAT+SHS+ ER+RREKI+ +++ LQ++
Sbjct: 153 KEVIHVRAKRGQATDSHSIAERIRREKINNKLRCLQDI 190
>gi|255586626|ref|XP_002533944.1| DNA binding protein, putative [Ricinus communis]
gi|223526075|gb|EEF28430.1| DNA binding protein, putative [Ricinus communis]
Length = 267
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 32/35 (91%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
IHVRA+RGQAT+SHS+ ERVRREKI+ +++ LQ+L
Sbjct: 147 IHVRAKRGQATDSHSIAERVRREKINNKLRCLQDL 181
>gi|58743491|gb|AAW81732.1| putative bZIPtranscription factor protein [Brassica oleracea]
Length = 263
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 32/35 (91%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+HVRARRGQAT+SHSL ERVRR KI+ER++ LQ++
Sbjct: 146 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDI 180
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 36/54 (66%)
Query: 55 TSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
+ QP VRARRGQAT+ HS+ ER+RRE+I+ERM+ LQ L +T R+
Sbjct: 13 MAPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRA 66
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 30/33 (90%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RREKIS+RMK LQ+L
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKSLQDL 352
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 59 PKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
P + VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 131 PPQSRTKVRARRGQATDPHSIAERLRRERIAERMKALQEL 170
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 3 LVNSHGEAKQAFGESSSDSNEVEFSGGGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEE 62
+NS G Q +S +SN + GG ST G + G + QP++
Sbjct: 159 FLNSTGPGSQNQNQSQGNSNS-QIPNFGGPVSASTPPPAGPSSC-GGAAAAAAPGQPRQR 216
Query: 63 YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 217 ---VRARRGQATDPHSIAERLRRERIAERMKALQEL 249
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 30/33 (90%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RREKIS+RMK LQ+L
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDL 352
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 30/33 (90%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RREKIS+RMK LQ+L
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDL 352
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 30/33 (90%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RREKIS+RMK LQ+L
Sbjct: 317 VRARRGQATDPHSIAERLRREKISDRMKNLQDL 349
>gi|388519201|gb|AFK47662.1| unknown [Lotus japonicus]
Length = 274
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 31/34 (91%)
Query: 65 HVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
HVRARRGQAT+SHSL ERVRR KI+E+++ LQN+
Sbjct: 156 HVRARRGQATDSHSLAERVRRGKINEKLRCLQNI 189
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 30/33 (90%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RREKIS+RMK LQ+L
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDL 352
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 34/43 (79%), Gaps = 3/43 (6%)
Query: 56 SDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S QPK+ VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 190 SGQPKQR---VRARRGQATDPHSIAERLRRERIAERMKALQEL 229
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 30/33 (90%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RREKIS+RMK LQ+L
Sbjct: 282 VRARRGQATDPHSIAERLRREKISDRMKNLQDL 314
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 55 TSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
T P + +RARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 127 TVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQEL 170
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 55 TSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
T P + +RARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 127 TVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQEL 170
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 55 TSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
T P + +RARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 127 TVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQEL 170
>gi|339716186|gb|AEJ88332.1| putative MYC protein, partial [Tamarix hispida]
Length = 181
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 30/37 (81%)
Query: 51 QGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREK 87
Q +++ P ++YIHVRARRGQAT+SHSL ER RREK
Sbjct: 145 QNTKSPPDPSKDYIHVRARRGQATDSHSLAERARREK 181
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 34/43 (79%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
VRARRGQAT+ HS+ ER+RRE+ISER+K LQ L + +T R+
Sbjct: 142 VRARRGQATDPHSIAERLRRERISERIKALQELVPSCNKTDRA 184
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 59 PKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
P + VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 278 PAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQEL 317
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RARRGQAT+ HS+ ER+RREKISERMK LQ+L
Sbjct: 315 TRARRGQATDPHSIAERLRREKISERMKNLQDL 347
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 59 PKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
P + VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 30 PAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQEL 69
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 59 PKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
P + VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 97 PAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQEL 136
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 35/47 (74%), Gaps = 5/47 (10%)
Query: 52 GSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
G+ S +P+ RARRGQAT+ HS+ ER+RREKISERMK LQ+L
Sbjct: 310 GNSASAKPR-----ARARRGQATDPHSIAERLRREKISERMKNLQDL 351
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RREKI+ERMK LQ L
Sbjct: 136 VRARRGQATDPHSIAERLRREKIAERMKALQEL 168
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 29/32 (90%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RARRGQAT+ HS+ ER+RREKISERMK LQ+L
Sbjct: 321 RARRGQATDPHSIAERLRREKISERMKNLQDL 352
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 34/41 (82%), Gaps = 3/41 (7%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
QP+++ VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 191 QPRQK---VRARRGQATDPHSIAERLRRERIAERMKALQEL 228
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 35/43 (81%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
VRARRGQAT+ HS+ ER+RRE+I+ERM+ LQ L +I ++ R+
Sbjct: 180 VRARRGQATDPHSIAERLRRERIAERMRALQELVPSINKSDRA 222
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 34/43 (79%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L + +T R+
Sbjct: 151 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKTDRA 193
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 34/41 (82%), Gaps = 3/41 (7%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
QP+++ VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 194 QPRQK---VRARRGQATDPHSIAERLRRERIAERMKALQEL 231
>gi|147821091|emb|CAN75381.1| hypothetical protein VITISV_027596 [Vitis vinifera]
Length = 328
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 42/90 (46%), Gaps = 44/90 (48%)
Query: 53 SQTSDQPKEEYIHVRARRGQATNSHSLVERV----------------------------- 83
S+ ++Q K++YIHVRARRGQAT+SHSL ERV
Sbjct: 144 SKPAEQSKQDYIHVRARRGQATDSHSLAERVMQFYTLLIFCFLVVPQMPKLKRIGLSWNS 203
Query: 84 ---------------RREKISERMKFLQNL 98
RREKISERMK LQ+L
Sbjct: 204 RSRCRCIGVSVYINARREKISERMKILQDL 233
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 59 PKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
P + VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 253 PAQPRQRVRARRGQATHPHSIAERLRRERIAERMKALQEL 292
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 40 GTGGNL--LLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQN 97
GTG N + G+ + PK VRARRGQAT+ HS+ ER+RREKIS+RMK LQ
Sbjct: 273 GTGLNAPPFMVPANGAAGNGAPKP---RVRARRGQATDPHSIAERLRREKISDRMKNLQE 329
Query: 98 L 98
L
Sbjct: 330 L 330
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 40 GTGGNL--LLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQN 97
GTG N + G+ + PK VRARRGQAT+ HS+ ER+RREKIS+RMK LQ
Sbjct: 273 GTGLNAPPFMVPANGAAGNGAPKP---RVRARRGQATDPHSIAERLRREKISDRMKNLQE 329
Query: 98 L 98
L
Sbjct: 330 L 330
>gi|118488234|gb|ABK95936.1| unknown [Populus trichocarpa]
Length = 283
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 59 PKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
P + VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 234 PAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQEL 273
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 34/43 (79%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
VRARRGQAT+ HS+ ER+RRE+I+ERM+ LQ+L +T R+
Sbjct: 132 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKTDRA 174
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 34/43 (79%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L + +T R+
Sbjct: 175 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNKTDRA 217
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RREKI+ERMK LQ L
Sbjct: 296 VRARRGQATDPHSIAERLRREKIAERMKNLQEL 328
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RREKIS+RMK LQ L
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQEL 346
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 34/43 (79%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L + +T ++
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSANKTDKA 186
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
QP++ VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 220 QPRQR---VRARRGQATDPHSIAERLRRERIAERMKALQEL 257
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 29/34 (85%)
Query: 65 HVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 31 RVRARRGQATDPHSIAERLRRERIAERMKALQEL 64
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 29/34 (85%)
Query: 65 HVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 30 RVRARRGQATDPHSIAERLRRERIAERMKALQEL 63
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 34/43 (79%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
VRARRGQAT+ HS+ ER+RRE+I+ERM+ LQ+L +T R+
Sbjct: 181 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNKTDRA 223
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 240 VRARRGQATDPHSIAERLRRERIAERMKALQEL 272
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 239 VRARRGQATDPHSIAERLRRERIAERMKALQEL 271
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RREKI+ERMK LQ L
Sbjct: 149 VRARRGQATDPHSIAERLRREKIAERMKNLQEL 181
>gi|168061161|ref|XP_001782559.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665966|gb|EDQ52634.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 154
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 33/39 (84%)
Query: 60 KEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
K+++I VRARRGQAT+S S+ E VR EKI +RMK+LQ+L
Sbjct: 5 KQDFIRVRARRGQATDSLSVAEWVRCEKIRKRMKYLQDL 43
>gi|62701739|gb|AAX92812.1| expressed protein [Oryza sativa Japonica Group]
Length = 507
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 45/91 (49%), Gaps = 35/91 (38%)
Query: 40 GTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVER----------------- 82
G GGN +GK + PK+ YIHVRARRGQAT+SHSL ER
Sbjct: 255 GHGGNG--KGKVLDAAGEPPKD-YIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSS 311
Query: 83 ---------------VRREKISERMKFLQNL 98
VRREKISERMK LQ+L
Sbjct: 312 ILAFADAIAAVFHLQVRREKISERMKLLQDL 342
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RREKIS+RMK LQ L
Sbjct: 314 VRARRGQATDPHSIAERLRREKISDRMKDLQEL 346
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RREKI+ERMK LQ L
Sbjct: 351 VRARRGQATDPHSIAERLRREKIAERMKNLQEL 383
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 183 VRARRGQATDPHSIAERLRRERIAERMKSLQEL 215
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella
moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella
moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella
moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella
moellendorffii]
Length = 143
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 30/33 (90%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ+L
Sbjct: 4 VRARRGQATDPHSIAERLRRERIAERMKALQDL 36
>gi|108864345|gb|ABA93365.2| expressed protein [Oryza sativa Japonica Group]
Length = 508
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 45/91 (49%), Gaps = 35/91 (38%)
Query: 40 GTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVER----------------- 82
G GGN +GK + PK+ YIHVRARRGQAT+SHSL ER
Sbjct: 255 GHGGNG--KGKVLDAAGEPPKD-YIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSS 311
Query: 83 ---------------VRREKISERMKFLQNL 98
VRREKISERMK LQ+L
Sbjct: 312 ILAFADAIAAVFHLQVRREKISERMKLLQDL 342
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RREKIS+RMK LQ L
Sbjct: 282 VRARRGQATDPHSIAERLRREKISDRMKNLQEL 314
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 145 VRARRGQATDPHSIAERLRRERIAERMKALQEL 177
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 130 VRARRGQATDPHSIAERLRRERIAERMKSLQEL 162
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 130 VRARRGQATDPHSIAERLRRERIAERMKSLQEL 162
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 159 VRARRGQATDPHSIAERLRRERIAERMKALQEL 191
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 204 VRARRGQATDPHSIAERLRRERIAERMKSLQEL 236
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 174 VRARRGQATDPHSIAERLRRERIAERMKALQEL 206
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 204 VRARRGQATDPHSIAERLRRERIAERMKSLQEL 236
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 253 VRARRGQATDPHSIAERLRRERIAERMKALQEL 285
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 34/47 (72%), Gaps = 5/47 (10%)
Query: 52 GSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
G+ S +P+ RARRGQAT+ HS+ ER+RREKISERMK LQ L
Sbjct: 312 GNSVSAKPRS-----RARRGQATDPHSIAERLRREKISERMKNLQEL 353
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQEL 282
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 117 VRARRGQATDPHSIAERLRRERIAERMKALQEL 149
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 128 VRARRGQATDPHSIAERLRRERIAERMKSLQEL 160
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 35/50 (70%), Gaps = 5/50 (10%)
Query: 49 GKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
G +Q +PK VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 175 GGATAQPQTKPK-----VRARRGQATDPHSIAERLRRERIAERMKSLQEL 219
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 28/32 (87%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RARRGQAT+ HS+ ER+RREKISERMK LQ L
Sbjct: 317 RARRGQATDPHSIAERLRREKISERMKNLQVL 348
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 28/32 (87%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RARRGQAT+ HS+ ER+RREKISERMK LQ L
Sbjct: 317 RARRGQATDPHSIAERLRREKISERMKNLQVL 348
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 28/32 (87%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RARRGQAT+ HS+ ER+RREKISERMK LQ L
Sbjct: 317 RARRGQATDPHSIAERLRREKISERMKNLQVL 348
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 28/32 (87%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RARRGQAT+ HS+ ER+RREKISERMK LQ L
Sbjct: 240 RARRGQATDPHSIAERLRREKISERMKNLQVL 271
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 238 VRARRGQATDPHSIAERLRRERIAERMKALQEL 270
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 99 VRARRGQATDPHSIAERLRRERIAERMKSLQEL 131
>gi|297728315|ref|NP_001176521.1| Os11g0442650 [Oryza sativa Japonica Group]
gi|255680061|dbj|BAH95249.1| Os11g0442650 [Oryza sativa Japonica Group]
Length = 461
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 45/91 (49%), Gaps = 35/91 (38%)
Query: 40 GTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVER----------------- 82
G GGN +GK + PK+ YIHVRARRGQAT+SHSL ER
Sbjct: 255 GHGGNG--KGKVLDAAGEPPKD-YIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSS 311
Query: 83 ---------------VRREKISERMKFLQNL 98
VRREKISERMK LQ+L
Sbjct: 312 ILAFADAIAAVFHLQVRREKISERMKLLQDL 342
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 99 VRARRGQATDPHSIAERLRRERIAERMKSLQEL 131
>gi|225456606|ref|XP_002267823.1| PREDICTED: transcription factor bHLH79 isoform 2 [Vitis vinifera]
Length = 262
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 53 SQTSDQPKEEYIHVRARRGQATNSHSLVERV--RREKISERMKFLQNLSLAIE 103
S+ ++Q K++YIHVRARRGQAT+SHSL ERV + + E + ++Q+L +E
Sbjct: 144 SKPAEQSKQDYIHVRARRGQATDSHSLAERVIGKALVLDEIINYIQSLQRQVE 196
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 30 VRARRGQATDPHSIAERLRRERIAERMKALQEL 62
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 34/51 (66%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
QP RARRGQAT+ HS+ ER+RRE+I+ERM+ LQ L +T R+
Sbjct: 118 QPPAPRPKQRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNKTDRA 168
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 28/33 (84%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRG AT+ HS+ ER+RREKI+ERMK LQ L
Sbjct: 240 VRARRGHATDPHSIAERLRREKIAERMKNLQEL 272
>gi|302813935|ref|XP_002988652.1| hypothetical protein SELMODRAFT_128445 [Selaginella
moellendorffii]
gi|300143473|gb|EFJ10163.1| hypothetical protein SELMODRAFT_128445 [Selaginella
moellendorffii]
Length = 61
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RREKI+ERMK LQ L
Sbjct: 1 VRARRGQATDPHSIAERLRREKIAERMKALQEL 33
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 34/51 (66%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
QP VRARRGQAT+ HS+ ER+RR +I+ER+K LQ L +T R+
Sbjct: 12 QPPGIRPRVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKTDRA 62
>gi|449461981|ref|XP_004148720.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 98
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 28/33 (84%)
Query: 51 QGSQTSDQPKEEYIHVRARRGQATNSHSLVERV 83
+ + +++ PKE YIHVRARRGQATNSHS+ ERV
Sbjct: 64 KSNNSAEAPKESYIHVRARRGQATNSHSVAERV 96
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 34/51 (66%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
QP VRARRGQAT+ HS+ ER+RR +I+ER+K LQ L +T R+
Sbjct: 8 QPPGIRPRVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNKTDRA 58
>gi|224101645|ref|XP_002312366.1| predicted protein [Populus trichocarpa]
gi|222852186|gb|EEE89733.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 30/40 (75%)
Query: 1 KSLVNSHGEAKQAFGESSSDSNEVEFSGGGGQDEPSTLEG 40
+SL S EAKQ G S +DS+E EFSGGGGQDEPS LEG
Sbjct: 255 ESLARSRDEAKQGMGGSGNDSDEAEFSGGGGQDEPSMLEG 294
>gi|297606863|ref|NP_001059108.2| Os07g0193800 [Oryza sativa Japonica Group]
gi|255677582|dbj|BAF21022.2| Os07g0193800, partial [Oryza sativa Japonica Group]
Length = 112
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 9 EAKQAFGESSSDSNEVEFSGGGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRA 68
EAK+ SSD N+ G D GN + + + PK++YIHVRA
Sbjct: 32 EAKRLKPMKSSDKND-SLRTEAGTD--------SGNSSKAADKNATPPEPPKQDYIHVRA 82
Query: 69 RRGQATNSHSLVERV 83
RRGQAT+SHSL ERV
Sbjct: 83 RRGQATDSHSLAERV 97
>gi|356554137|ref|XP_003545405.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 305
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 41/53 (77%), Gaps = 2/53 (3%)
Query: 48 RGK--QGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RGK + + T ++ +E ++VRAR GQAT+S +L ERVRR KI+E++++LQN+
Sbjct: 133 RGKRVKNNVTEEEKAKEVVNVRARSGQATDSRNLAERVRRGKINEKLRYLQNI 185
>gi|356564005|ref|XP_003550247.1| PREDICTED: transcription factor BEE 1-like [Glycine max]
Length = 268
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 30/32 (93%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RARRGQAT+SH+L ERVRR KI+E++++LQN+
Sbjct: 152 RARRGQATDSHNLAERVRRGKINEKLRYLQNI 183
>gi|414873438|tpg|DAA51995.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 146
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 26/28 (92%)
Query: 56 SDQPKEEYIHVRARRGQATNSHSLVERV 83
++ PK++YIHVRARRGQAT+SHSL ERV
Sbjct: 116 AEPPKQDYIHVRARRGQATDSHSLAERV 143
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 28/32 (87%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA+RGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 189 RAKRGQATDPHSIAERLRRERIAERMKALQEL 220
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 28/32 (87%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA+RGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 196 RAKRGQATDPHSIAERLRRERIAERMKALQEL 227
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQEL 282
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 27/32 (84%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 240 RAWRGQATDPHSIAERLRRERIAERMKALQEL 271
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 28/32 (87%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA+RGQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 195 RAKRGQATDPHSIAERLRRERIAERMKSLQEL 226
>gi|297721935|ref|NP_001173331.1| Os03g0231950 [Oryza sativa Japonica Group]
gi|255674340|dbj|BAH92059.1| Os03g0231950 [Oryza sativa Japonica Group]
Length = 152
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 25/28 (89%)
Query: 56 SDQPKEEYIHVRARRGQATNSHSLVERV 83
+D +EEY+HVRA+RGQATNSHSL ERV
Sbjct: 112 ADASREEYVHVRAKRGQATNSHSLAERV 139
>gi|297606176|ref|NP_001058071.2| Os06g0613500 [Oryza sativa Japonica Group]
gi|255677227|dbj|BAF19985.2| Os06g0613500, partial [Oryza sativa Japonica Group]
Length = 178
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNL 98
ARRGQAT+SHSL ER RREKI+ RM+ L+ L
Sbjct: 1 ARRGQATDSHSLAERARREKINARMELLKEL 31
>gi|168048993|ref|XP_001776949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671650|gb|EDQ58198.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEE 104
+ RA+RG AT+ S+ ERVRR KISERMK LQ+L ++++
Sbjct: 381 MRTRAKRGCATHPRSIAERVRRTKISERMKKLQDLVPSMDK 421
>gi|357444375|ref|XP_003592465.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355481513|gb|AES62716.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 433
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR KISERM+ LQ+L
Sbjct: 355 IRAKRGCATHPRSIAERVRRTKISERMRKLQDL 387
>gi|18403381|ref|NP_564583.1| transcription factor bHLH122 [Arabidopsis thaliana]
gi|75308807|sp|Q9C690.1|BH122_ARATH RecName: Full=Transcription factor bHLH122; AltName: Full=Basic
helix-loop-helix protein 122; Short=AtbHLH122;
Short=bHLH 122; AltName: Full=Transcription factor EN
70; AltName: Full=bHLH transcription factor bHLH122
gi|12320788|gb|AAG50543.1|AC079828_14 unknown protein [Arabidopsis thaliana]
gi|14334500|gb|AAK59447.1| unknown protein [Arabidopsis thaliana]
gi|17104811|gb|AAL34294.1| unknown protein [Arabidopsis thaliana]
gi|332194505|gb|AEE32626.1| transcription factor bHLH122 [Arabidopsis thaliana]
Length = 379
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR KISERM+ LQ+L
Sbjct: 304 IRAKRGCATHPRSIAERVRRTKISERMRKLQDL 336
>gi|356538931|ref|XP_003537954.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 418
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR KISERM+ LQ+L
Sbjct: 340 IRAKRGCATHPRSIAERVRRTKISERMRKLQDL 372
>gi|297852830|ref|XP_002894296.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297340138|gb|EFH70555.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR KISERM+ LQ+L
Sbjct: 303 IRAKRGCATHPRSIAERVRRTKISERMRKLQDL 335
>gi|356544541|ref|XP_003540708.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 415
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR KISERM+ LQ+L
Sbjct: 337 IRAKRGCATHPRSIAERVRRTKISERMRKLQDL 369
>gi|356557515|ref|XP_003547061.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 411
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR KISERM+ LQ+L
Sbjct: 333 IRAKRGCATHPRSIAERVRRTKISERMRKLQDL 365
>gi|356527594|ref|XP_003532393.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 176
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 24/29 (82%)
Query: 56 SDQPKEEYIHVRARRGQATNSHSLVERVR 84
++ P YIHVRARRGQAT+SHSL ERV+
Sbjct: 148 AEDPPTGYIHVRARRGQATDSHSLAERVQ 176
>gi|168056250|ref|XP_001780134.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668446|gb|EDQ55053.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEET 105
+ RA+RG AT+ S+ ERVRR +ISERMK LQ+L +E+T
Sbjct: 1 MRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKT 42
>gi|357454359|ref|XP_003597460.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486508|gb|AES67711.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 412
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%), Gaps = 8/46 (17%)
Query: 61 EEYIH--------VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
E+++H +RA+RG AT+ S+ ERVRR KISERM+ LQ+L
Sbjct: 319 EKFLHFSDSVPMKIRAKRGCATHPRSIAERVRRTKISERMRKLQDL 364
>gi|125526611|gb|EAY74725.1| hypothetical protein OsI_02616 [Oryza sativa Indica Group]
Length = 467
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Query: 40 GTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERV 83
G GGN +GK + PK+ YIHVRARRGQAT+SHSL ERV
Sbjct: 251 GHGGNG--KGKVLDAAGEPPKD-YIHVRARRGQATDSHSLAERV 291
>gi|357454361|ref|XP_003597461.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486509|gb|AES67712.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 411
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%), Gaps = 8/46 (17%)
Query: 61 EEYIH--------VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
E+++H +RA+RG AT+ S+ ERVRR KISERM+ LQ+L
Sbjct: 319 EKFLHFSDSVPMKIRAKRGCATHPRSIAERVRRTKISERMRKLQDL 364
>gi|168027605|ref|XP_001766320.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682534|gb|EDQ68952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 120
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+ RA+RG AT+ S+ ERVRR KISERMK LQ+L
Sbjct: 30 MRTRAKRGCATHPRSIAERVRRTKISERMKRLQDL 64
>gi|356550347|ref|XP_003543549.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 408
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR KISERM+ LQ+L
Sbjct: 330 IRAKRGCATHPRSIAERVRRTKISERMRKLQDL 362
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 29/38 (76%)
Query: 71 GQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
GQAT+ HS+ ER+RRE+I+ERMK LQ L + +T ++
Sbjct: 169 GQATDPHSIAERLRRERIAERMKALQELVPSANKTDKA 206
>gi|168045219|ref|XP_001775076.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673663|gb|EDQ60183.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 73
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEET 105
+ RA+RG AT+ S+ ERVRR +ISERMK LQ+L +E+T
Sbjct: 3 MRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKT 44
>gi|168056355|ref|XP_001780186.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668419|gb|EDQ55027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 29/38 (76%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIE 103
+RA RG AT+ S+ ERVRR KISERMK LQ+L +++
Sbjct: 63 IRANRGHATHPRSIAERVRRGKISERMKKLQDLVPSMD 100
>gi|414589820|tpg|DAA40391.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 244
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEE 104
+RA+RG AT+ S+ ERVRR KISER++ LQ L +E+
Sbjct: 158 CKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEK 198
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 59 PKEEYIH-VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
P Y+ +RA RG AT+ S+ ERVRR KISERMK LQ L
Sbjct: 371 PSMVYLKTLRANRGHATHPRSIAERVRRGKISERMKKLQEL 411
>gi|224075772|ref|XP_002304761.1| predicted protein [Populus trichocarpa]
gi|222842193|gb|EEE79740.1| predicted protein [Populus trichocarpa]
Length = 422
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 27/33 (81%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +ISERM+ LQ+L
Sbjct: 344 IRAKRGCATHPRSIAERVRRTRISERMRKLQDL 376
>gi|255544792|ref|XP_002513457.1| DNA binding protein, putative [Ricinus communis]
gi|223547365|gb|EEF48860.1| DNA binding protein, putative [Ricinus communis]
Length = 418
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 27/33 (81%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +ISERM+ LQ+L
Sbjct: 339 IRAKRGCATHPRSIAERVRRTRISERMRKLQDL 371
>gi|223950383|gb|ACN29275.1| unknown [Zea mays]
gi|414869404|tpg|DAA47961.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414869405|tpg|DAA47962.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 347
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ERVRR KISER++ LQ L
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQEL 329
>gi|356537351|ref|XP_003537191.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 384
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 59 PKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
P +RA+RG AT+ S+ ERVRR +ISERM+ LQ L
Sbjct: 293 PDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQEL 332
>gi|414869403|tpg|DAA47960.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 380
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ERVRR KISER++ LQ L
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQEL 329
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEE 104
+RA+RG AT+ S+ ERVRR KISER++ LQ L +E+
Sbjct: 323 CKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEK 363
>gi|226505986|ref|NP_001147910.1| DNA binding protein [Zea mays]
gi|195614520|gb|ACG29090.1| DNA binding protein [Zea mays]
Length = 380
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ERVRR KISER++ LQ L
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQEL 329
>gi|449437603|ref|XP_004136581.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449522885|ref|XP_004168456.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 366
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 27/33 (81%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +ISERM+ LQ+L
Sbjct: 282 IRAKRGCATHPRSIAERVRRTRISERMRKLQDL 314
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 53 SQTSDQPKEEYIH------VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S +S+ EE++ VRA+RG AT+ S+ ERVRR +ISERM+ LQ L
Sbjct: 449 STSSELAMEEFLQDAVPCKVRAKRGCATHPRSIAERVRRTRISERMRKLQEL 500
>gi|449526183|ref|XP_004170093.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH122-like
[Cucumis sativus]
Length = 437
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR KISERM+ LQ L
Sbjct: 359 LRAKRGCATHPRSIAERVRRTKISERMRKLQEL 391
>gi|449442685|ref|XP_004139111.1| PREDICTED: transcription factor bHLH122-like [Cucumis sativus]
Length = 437
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR KISERM+ LQ L
Sbjct: 359 LRAKRGCATHPRSIAERVRRTKISERMRKLQEL 391
>gi|357159056|ref|XP_003578325.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 409
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEE 104
+RA+RG AT+ S+ ERVRR KISER++ LQ L +E+
Sbjct: 325 CKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEK 365
>gi|356500459|ref|XP_003519049.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 378
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 59 PKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
P +RA+RG AT+ S+ ERVRR +ISERM+ LQ L
Sbjct: 287 PDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQEL 326
>gi|414869406|tpg|DAA47963.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 277
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ERVRR KISER++ LQ L
Sbjct: 192 CKVRAKRGCATHPRSIAERVRRTKISERIRKLQEL 226
>gi|312282767|dbj|BAJ34249.1| unnamed protein product [Thellungiella halophila]
Length = 363
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ERVRR +ISERM+ LQ L
Sbjct: 285 VRAKRGCATHPRSIAERVRRTRISERMRKLQEL 317
>gi|326503832|dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEE 104
+RA+RG AT+ S+ ERVRR KISER++ LQ L +E+
Sbjct: 324 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEK 362
>gi|414590533|tpg|DAA41104.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 367
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR KISER++ LQ L
Sbjct: 285 IRAKRGCATHPRSIAERVRRTKISERIRKLQEL 317
>gi|297746360|emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +ISERM+ LQ L
Sbjct: 219 IRAKRGCATHPRSIAERVRRTRISERMRKLQEL 251
>gi|255544250|ref|XP_002513187.1| DNA binding protein, putative [Ricinus communis]
gi|223547685|gb|EEF49178.1| DNA binding protein, putative [Ricinus communis]
Length = 432
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 27/33 (81%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +ISERM+ LQ+L
Sbjct: 350 IRAKRGFATHPRSIAERVRRTRISERMRKLQDL 382
>gi|356525636|ref|XP_003531430.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 450
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 27/33 (81%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +ISER+K LQ+L
Sbjct: 366 IRAKRGFATHPRSIAERVRRTRISERIKKLQDL 398
>gi|147862096|emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]
Length = 446
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +ISERM+ LQ L
Sbjct: 362 IRAKRGCATHPRSIAERVRRTRISERMRKLQEL 394
>gi|359487434|ref|XP_003633592.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 408
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 8/46 (17%)
Query: 61 EEYIH--------VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
E+++H +RA+RG AT+ S+ ERVRR +ISERM+ LQ L
Sbjct: 320 EKFLHFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQEL 365
>gi|359478406|ref|XP_002282999.2| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 411
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +ISERM+ LQ L
Sbjct: 360 IRAKRGCATHPRSIAERVRRTRISERMRKLQEL 392
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 35/70 (50%), Gaps = 15/70 (21%)
Query: 29 GGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKI 88
GGG+D S + L L GK RA RG AT+ SL R RRE+I
Sbjct: 243 GGGEDSSSKEDDASKALNLNGK---------------TRASRGAATDPQSLYARKRRERI 287
Query: 89 SERMKFLQNL 98
+ER++ LQNL
Sbjct: 288 NERLRILQNL 297
>gi|147789805|emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
Length = 394
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +ISERM+ LQ L
Sbjct: 310 IRAKRGCATHPRSIAERVRRTRISERMRKLQEL 342
>gi|42569863|ref|NP_181757.2| transcription factor bHLH130 [Arabidopsis thaliana]
gi|75288858|sp|Q66GR3.1|BH130_ARATH RecName: Full=Transcription factor bHLH130; AltName: Full=Basic
helix-loop-helix protein 130; Short=AtbHLH130;
Short=bHLH 130; AltName: Full=Transcription factor EN
69; AltName: Full=bHLH transcription factor bHLH130
gi|51536448|gb|AAU05462.1| At2g42280 [Arabidopsis thaliana]
gi|52421281|gb|AAU45210.1| At2g42280 [Arabidopsis thaliana]
gi|110737862|dbj|BAF00869.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330255005|gb|AEC10099.1| transcription factor bHLH130 [Arabidopsis thaliana]
Length = 359
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +ISERM+ LQ L
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQEL 311
>gi|225441696|ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 405
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +ISERM+ LQ L
Sbjct: 321 IRAKRGCATHPRSIAERVRRTRISERMRKLQEL 353
>gi|147795431|emb|CAN77105.1| hypothetical protein VITISV_037095 [Vitis vinifera]
Length = 238
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGR 107
VRA+RG AT+ S+ ERVRR +IS+R++ LQ L +++T R
Sbjct: 173 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKTPR 216
>gi|297736219|emb|CBI24857.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 8/46 (17%)
Query: 61 EEYIH--------VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
E+++H +RA+RG AT+ S+ ERVRR +ISERM+ LQ L
Sbjct: 158 EKFLHFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQEL 203
>gi|255583282|ref|XP_002532405.1| DNA binding protein, putative [Ricinus communis]
gi|223527901|gb|EEF29990.1| DNA binding protein, putative [Ricinus communis]
Length = 355
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 8/46 (17%)
Query: 61 EEYIH--------VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
E+++H +RA+RG AT+ S+ ERVRR +ISERM+ LQ L
Sbjct: 258 EKFLHFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQEL 303
>gi|226509284|ref|NP_001148741.1| DNA binding protein [Zea mays]
gi|195621758|gb|ACG32709.1| DNA binding protein [Zea mays]
gi|414887073|tpg|DAA63087.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414887074|tpg|DAA63088.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 374
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR KISER++ LQ L
Sbjct: 292 IRAKRGCATHPRSIAERVRRTKISERIRKLQEL 324
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 24/28 (85%)
Query: 71 GQATNSHSLVERVRREKISERMKFLQNL 98
GQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQEL 291
>gi|297739719|emb|CBI29901.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +ISERM+ LQ L
Sbjct: 196 IRAKRGCATHPRSIAERVRRTRISERMRKLQEL 228
>gi|414590534|tpg|DAA41105.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR KISER++ LQ L
Sbjct: 288 IRAKRGCATHPRSIAERVRRTKISERIRKLQEL 320
>gi|297827895|ref|XP_002881830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327669|gb|EFH58089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +ISERM+ LQ L
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQEL 311
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 35/70 (50%), Gaps = 15/70 (21%)
Query: 29 GGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKI 88
GGG+D S + L L GK RA RG AT+ SL R RRE+I
Sbjct: 244 GGGEDSSSKEDDPSKALNLNGK---------------TRASRGAATDPQSLYARKRRERI 288
Query: 89 SERMKFLQNL 98
+ER++ LQNL
Sbjct: 289 NERLRILQNL 298
>gi|224120208|ref|XP_002330991.1| predicted protein [Populus trichocarpa]
gi|222872921|gb|EEF10052.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 8/46 (17%)
Query: 61 EEYIH--------VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
E+++H +RA+RG AT+ S+ ERVRR +ISERM+ LQ L
Sbjct: 258 EKFLHFQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQEL 303
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 35/70 (50%), Gaps = 15/70 (21%)
Query: 29 GGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKI 88
GGG+D S + L L GK RA RG AT+ SL R RRE+I
Sbjct: 241 GGGEDSSSKEDDPSKALNLNGK---------------TRASRGAATDPQSLYARKRRERI 285
Query: 89 SERMKFLQNL 98
+ER++ LQNL
Sbjct: 286 NERLRILQNL 295
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 24/28 (85%)
Query: 71 GQATNSHSLVERVRREKISERMKFLQNL 98
GQAT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQEL 291
>gi|2673918|gb|AAB88652.1| unknown protein [Arabidopsis thaliana]
Length = 380
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +ISERM+ LQ L
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERMRKLQEL 332
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 35/70 (50%), Gaps = 15/70 (21%)
Query: 29 GGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKI 88
GGG+D S + L L GK RA RG AT+ SL R RRE+I
Sbjct: 244 GGGEDSSSKEDDPSKALNLNGK---------------TRASRGAATDPQSLYARKRRERI 288
Query: 89 SERMKFLQNL 98
+ER++ LQNL
Sbjct: 289 NERLRILQNL 298
>gi|357509821|ref|XP_003625199.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355500214|gb|AES81417.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 319
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEE 104
+RA+RG AT+ SL ERVRR +ISERM+ LQ + I++
Sbjct: 243 IRAKRGFATHPRSLAERVRRTRISERMRKLQEIVPNIDK 281
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 20/92 (21%)
Query: 7 HGEAKQAFGESSSDSNEVEFSGGGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHV 66
HG++ + DSNE+ GGG + T + L+GK
Sbjct: 207 HGQSLSSCCSEDDDSNEL---NGGGSSSLDQKDST--TIKLKGKS--------------- 246
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
R+ RG AT+ S+ R RREKI+ER+K LQNL
Sbjct: 247 RSERGSATDPQSIYARRRREKINERLKILQNL 278
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P + + RA RG AT+ SL R RRE+I+ER++ LQNL
Sbjct: 179 KPSSKKMGTRANRGAATDPQSLYARKRRERINERLRILQNL 219
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT+ SL R RRE+I+ER+K LQNL
Sbjct: 260 RASRGSATDPQSLYARKRRERINERLKILQNL 291
>gi|224139834|ref|XP_002323299.1| predicted protein [Populus trichocarpa]
gi|222867929|gb|EEF05060.1| predicted protein [Populus trichocarpa]
Length = 107
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 8/46 (17%)
Query: 61 EEYIH--------VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
E+++H +RA+RG AT+ S+ ERVRR +ISERM+ LQ L
Sbjct: 17 EKFLHLQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQEL 62
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+P + + RA RG AT+ SL R RRE+I+ER++ LQNL
Sbjct: 179 KPSSKKMGTRANRGAATDPQSLYARKRRERINERLRILQNL 219
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT+ SL R RRE+I+ER+K LQNL
Sbjct: 254 ARASRGSATDPQSLYARKRRERINERLKILQNL 286
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT+ SL R RRE+I+ER+K LQNL
Sbjct: 255 ARASRGSATDPQSLYARKRRERINERLKILQNL 287
>gi|242082273|ref|XP_002445905.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
gi|241942255|gb|EES15400.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
Length = 399
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR KISER++ LQ L
Sbjct: 317 IRAKRGCATHPRSIAERVRRTKISERIRKLQEL 349
>gi|224106043|ref|XP_002314023.1| predicted protein [Populus trichocarpa]
gi|222850431|gb|EEE87978.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +ISERM+ LQ L
Sbjct: 337 IRAKRGFATHPRSIAERVRRTRISERMRKLQEL 369
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 25/32 (78%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA+RG AT+ S+ R RREKI+ER+K LQNL
Sbjct: 443 RAKRGSATDPQSVYARHRREKINERLKNLQNL 474
>gi|115479871|ref|NP_001063529.1| Os09g0487900 [Oryza sativa Japonica Group]
gi|113631762|dbj|BAF25443.1| Os09g0487900 [Oryza sativa Japonica Group]
Length = 401
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEE 104
+RA+RG AT+ S+ ERVRR +ISER++ LQ L +E+
Sbjct: 319 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEK 357
>gi|125564183|gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
Length = 400
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEE 104
+RA+RG AT+ S+ ERVRR +ISER++ LQ L +E+
Sbjct: 318 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEK 356
>gi|302788881|ref|XP_002976209.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
gi|300155839|gb|EFJ22469.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
Length = 512
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +ISERM+ LQ L
Sbjct: 416 LRAKRGCATHPRSIAERVRRTRISERMRRLQEL 448
>gi|224055255|ref|XP_002298446.1| predicted protein [Populus trichocarpa]
gi|222845704|gb|EEE83251.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +ISERM+ LQ L
Sbjct: 336 IRAKRGFATHPRSIAERVRRTRISERMRKLQEL 368
>gi|125606147|gb|EAZ45183.1| hypothetical protein OsJ_29826 [Oryza sativa Japonica Group]
Length = 379
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEE 104
+RA+RG AT+ S+ ERVRR +ISER++ LQ L +E+
Sbjct: 297 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEK 335
>gi|140084327|gb|ABO84930.1| Rhd6-like 1 [Physcomitrella patens]
Length = 762
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+ RAR+G A + S+ RVRRE+ISER+K LQ L
Sbjct: 637 LKPRARQGSANDPQSIAARVRRERISERLKVLQAL 671
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 34 EPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHV----RARRGQATNSHSLVERVRREKIS 89
E +T++ + N + G+ S +SD K V RA +G AT+ SL R RREKI+
Sbjct: 132 ESNTVDESNTNWI-DGQSLSNSSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKIN 190
Query: 90 ERMKFLQNL 98
ER+K LQNL
Sbjct: 191 ERLKTLQNL 199
>gi|168027850|ref|XP_001766442.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682351|gb|EDQ68770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 879
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RAR+G A + S+ RVRRE+ISER+K LQ L
Sbjct: 755 RARQGSANDPQSIAARVRRERISERLKVLQAL 786
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 34 EPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHV----RARRGQATNSHSLVERVRREKIS 89
E +T++ + N + G+ S +SD K V RA +G AT+ SL R RREKI+
Sbjct: 132 ESNTVDESNTNWV-DGQSLSNSSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKIN 190
Query: 90 ERMKFLQNL 98
ER+K LQNL
Sbjct: 191 ERLKTLQNL 199
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 25/32 (78%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RARRG AT+ S+ R RREKI+ER+K LQ+L
Sbjct: 443 RARRGSATDPQSVYARHRREKINERLKTLQHL 474
>gi|224053374|ref|XP_002297788.1| predicted protein [Populus trichocarpa]
gi|222845046|gb|EEE82593.1| predicted protein [Populus trichocarpa]
Length = 111
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA+RG AT+ S+ ERVRR +ISERM+ LQ+L
Sbjct: 33 RAKRGCATHPRSIAERVRRTRISERMRKLQDL 64
>gi|357148389|ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 377
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +ISER++ LQ L
Sbjct: 298 CKIRAKRGCATHPRSIAERVRRTRISERIRKLQEL 332
>gi|140084334|gb|ABO84931.1| Rhd6-like 2 [Physcomitrella patens]
Length = 173
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+ RAR+G A + S+ RVRRE+ISER+K LQ L
Sbjct: 46 LKPRARQGSANDPQSIAARVRRERISERLKVLQAL 80
>gi|414879182|tpg|DAA56313.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 323
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRG AT+ S+ ER RR +IS+R+K LQ+L
Sbjct: 283 VRARRGCATHPRSIAERERRTRISKRLKKLQDL 315
>gi|168039365|ref|XP_001772168.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676499|gb|EDQ62981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 945
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RAR+G A + S+ RVRRE+ISER+K LQ L
Sbjct: 823 RARQGSANDPQSIAARVRRERISERLKVLQAL 854
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 34 EPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHV----RARRGQATNSHSLVERVRREKIS 89
E +T++ + N + G+ S +SD K V RA +G AT+ SL R RREKI+
Sbjct: 132 ESNTVDESNTNWV-DGQSLSNSSDDEKASVTSVKGKTRATKGTATDPQSLYARKRREKIN 190
Query: 90 ERMKFLQNL 98
ER+K LQNL
Sbjct: 191 ERLKTLQNL 199
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +ISER++ LQ L
Sbjct: 307 IRAKRGCATHPRSIAERVRRTRISERIRKLQEL 339
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ERVRR +IS+R++ LQ L
Sbjct: 181 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEL 215
>gi|168012170|ref|XP_001758775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689912|gb|EDQ76281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 95
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 25/32 (78%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RARRG AT+ S+ ER RR +ISERMK LQ+L
Sbjct: 16 RARRGYATHPRSIAERNRRSRISERMKKLQDL 47
>gi|414879181|tpg|DAA56312.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 231
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRG AT+ S+ ER RR +IS+R+K LQ+L
Sbjct: 152 VRARRGCATHPRSIAERERRTRISKRLKKLQDL 184
>gi|339716190|gb|AEJ88334.1| putative MYC protein [Tamarix hispida]
Length = 269
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ERVRR +IS+R++ LQ L
Sbjct: 224 VRAKRGCATHPRSIAERVRRTRISDRIRKLQEL 256
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT+ SL R RRE+I+ER++ LQNL
Sbjct: 264 TRASRGSATDPQSLYARKRRERINERLRILQNL 296
>gi|125562107|gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indica Group]
Length = 403
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +ISER++ LQ L
Sbjct: 322 IRAKRGCATHPRSIAERVRRTRISERIRKLQEL 354
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
R+ RG AT+ SL R RRE+I+ER+K LQNL
Sbjct: 225 RSSRGPATDPQSLYARKRRERINERLKILQNL 256
>gi|115477188|ref|NP_001062190.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|42408931|dbj|BAD10188.1| putative transcription factor RAU1 [Oryza sativa Japonica Group]
gi|113624159|dbj|BAF24104.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|125603951|gb|EAZ43276.1| hypothetical protein OsJ_27873 [Oryza sativa Japonica Group]
gi|215712322|dbj|BAG94449.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +ISER++ LQ L
Sbjct: 318 IRAKRGCATHPRSIAERVRRTRISERIRKLQEL 350
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT+ SL R RREKI+ER++ LQNL
Sbjct: 184 ARANRGSATDPQSLYARKRREKINERLRTLQNL 216
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT+ SL R RRE+I+ER++ LQNL
Sbjct: 261 TRASRGSATDPQSLYARKRRERINERLRILQNL 293
>gi|302810858|ref|XP_002987119.1| hypothetical protein SELMODRAFT_28264 [Selaginella
moellendorffii]
gi|300145016|gb|EFJ11695.1| hypothetical protein SELMODRAFT_28264 [Selaginella
moellendorffii]
Length = 85
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +ISERM+ LQ L
Sbjct: 23 CRLRAKRGCATHPRSIAERVRRTRISERMRRLQEL 57
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT+ SL R RREKI+ER++ LQNL
Sbjct: 199 RANRGSATDPQSLYARKRREKINERLRTLQNL 230
>gi|224145129|ref|XP_002325537.1| predicted protein [Populus trichocarpa]
gi|222862412|gb|EEE99918.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ERVRR +IS+R++ LQ L
Sbjct: 168 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEL 202
>gi|242055293|ref|XP_002456792.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
gi|241928767|gb|EES01912.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
Length = 361
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 8/63 (12%)
Query: 36 STLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFL 95
S+LE +G + L+ +Q S VRA+RG AT+ S+ ER RR +IS+R+K L
Sbjct: 259 SSLEMSGMDDYLQMQQDSVA--------CRVRAKRGCATHPRSIAERERRTRISKRLKKL 310
Query: 96 QNL 98
Q+L
Sbjct: 311 QDL 313
>gi|19401700|gb|AAL87667.1| transcription factor RAU1 [Oryza sativa]
Length = 150
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +ISER++ LQ L
Sbjct: 69 IRAKRGCATHPRSIAERVRRTRISERIRKLQEL 101
>gi|222619693|gb|EEE55825.1| hypothetical protein OsJ_04431 [Oryza sativa Japonica Group]
Length = 171
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
QP RA+RG AT+ S+ ER RR +IS+R+K LQ+L
Sbjct: 85 QPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDL 125
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT+ SL R RRE+I+ER++ LQNL
Sbjct: 287 TRASRGSATDPQSLYARKRRERINERLRILQNL 319
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT+ SL R RRE+I+ER++ LQNL
Sbjct: 287 TRASRGSATDPQSLYARKRRERINERLRILQNL 319
>gi|356504823|ref|XP_003521194.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 387
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEE 104
+RA+RG AT+ S+ ERVRR +ISER++ LQ L +++
Sbjct: 303 IRAKRGFATHPRSIAERVRRTRISERIRKLQELVPTMDK 341
>gi|323388933|gb|ADX60271.1| bHLH transcription factor [Oryza sativa Japonica Group]
gi|323388951|gb|ADX60280.1| HLH transcription factor [Oryza sativa Japonica Group]
Length = 387
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
QP RA+RG AT+ S+ ER RR +IS+R+K LQ+L
Sbjct: 301 QPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDL 341
>gi|115441653|ref|NP_001045106.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|56784863|dbj|BAD82103.1| putative helix-loop-helix protein 1A [Oryza sativa Japonica Group]
gi|113534637|dbj|BAF07020.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|215687014|dbj|BAG90828.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189543|gb|EEC71970.1| hypothetical protein OsI_04807 [Oryza sativa Indica Group]
Length = 387
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
QP RA+RG AT+ S+ ER RR +IS+R+K LQ+L
Sbjct: 301 QPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDL 341
>gi|357440299|ref|XP_003590427.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355479475|gb|AES60678.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 373
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 30/41 (73%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETG 106
+RA+RG A + SL +RVRR +I+ERM+ LQ + L I++T
Sbjct: 193 IRAKRGFARHPRSLAKRVRRTRINERMRKLQEVVLNIDKTS 233
>gi|449436269|ref|XP_004135915.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449521930|ref|XP_004167982.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 419
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ER+RR +ISER+K LQ L
Sbjct: 342 IRAKRGCATHPRSIAERMRRTRISERIKKLQEL 374
>gi|357498241|ref|XP_003619409.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355494424|gb|AES75627.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 129
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 30/40 (75%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEET 105
+RA+RG A + SL +RVRR +I+ERM+ LQ + L I++T
Sbjct: 54 IRAKRGFARHPRSLAKRVRRTRINERMRKLQEVVLNIDKT 93
>gi|225460440|ref|XP_002271390.1| PREDICTED: transcription factor bHLH80-like [Vitis vinifera]
Length = 251
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ERVRR +IS+R++ LQ L
Sbjct: 173 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEL 207
>gi|20161601|dbj|BAB90521.1| B1065G12.3 [Oryza sativa Japonica Group]
Length = 234
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
QP RA+RG AT+ S+ ER RR +IS+R+K LQ+L
Sbjct: 148 QPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDL 188
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT SL R RRE+I+ER++ LQNL
Sbjct: 195 RASRGAATEPQSLYARKRRERINERLRILQNL 226
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 36 STLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFL 95
S + N L G+ P + RA G AT+ SL R RRE+I+ER++ L
Sbjct: 234 SCFSQSDSNAYLEPNGGASKDPAPPNLHRKSRATTGAATDPQSLYARKRRERINERLRIL 293
Query: 96 QNL 98
QNL
Sbjct: 294 QNL 296
>gi|297809111|ref|XP_002872439.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318276|gb|EFH48698.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ERVRR +IS+R++ LQ L
Sbjct: 184 FRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEL 218
>gi|255561634|ref|XP_002521827.1| DNA binding protein, putative [Ricinus communis]
gi|223539040|gb|EEF40637.1| DNA binding protein, putative [Ricinus communis]
Length = 284
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ERVRR +IS+R++ LQ L
Sbjct: 192 VRAKRGCATHPRSIAERVRRTRISDRIRKLQEL 224
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT+ SL R RRE+I+ER+K LQNL
Sbjct: 217 RAGRGAATDPQSLYARKRRERINERLKTLQNL 248
>gi|15233768|ref|NP_192657.1| transcription factor bHLH81 [Arabidopsis thaliana]
gi|75311758|sp|Q9M0R0.1|BH081_ARATH RecName: Full=Transcription factor bHLH81; AltName: Full=Basic
helix-loop-helix protein 81; Short=AtbHLH81; Short=bHLH
81; AltName: Full=Transcription factor EN 72; AltName:
Full=bHLH transcription factor bHLH081
gi|7267561|emb|CAB78042.1| putative protein [Arabidopsis thaliana]
gi|34146832|gb|AAQ62424.1| At4g09180 [Arabidopsis thaliana]
gi|110741264|dbj|BAF02182.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332657332|gb|AEE82732.1| transcription factor bHLH81 [Arabidopsis thaliana]
Length = 262
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ERVRR +IS+R++ LQ L
Sbjct: 182 FRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEL 216
>gi|388503832|gb|AFK39982.1| unknown [Medicago truncatula]
Length = 406
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +IS+R+K LQ L
Sbjct: 322 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGL 354
>gi|296089503|emb|CBI39322.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ERVRR +IS+R++ LQ L
Sbjct: 103 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEL 137
>gi|357457619|ref|XP_003599090.1| DNA binding protein [Medicago truncatula]
gi|355488138|gb|AES69341.1| DNA binding protein [Medicago truncatula]
Length = 403
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +IS+R+K LQ L
Sbjct: 319 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGL 351
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT+ S+ R RRE+I+ER++ LQNL
Sbjct: 207 TRASRGAATDPQSIYARKRRERINERLRILQNL 239
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +IS+R++ LQ L
Sbjct: 186 CKIRAKRGCATHPRSIAERVRRTRISDRIRKLQEL 220
>gi|297846606|ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337026|gb|EFH67443.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ERVRR +IS+R++ LQ L
Sbjct: 178 VRAKRGCATHPRSIAERVRRTRISDRIRRLQEL 210
>gi|339716188|gb|AEJ88333.1| putative MYC protein [Tamarix hispida]
Length = 160
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ERVRR +IS+R++ LQ L
Sbjct: 82 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEL 116
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT+ SL R RRE+I+ER++ LQNL
Sbjct: 197 RASRGGATDPQSLYARKRRERINERLRILQNL 228
>gi|15219606|ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName: Full=Transcription factor bHLH80; AltName: Full=Basic
helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
80; AltName: Full=Transcription factor EN 71; AltName:
Full=bHLH transcription factor bHLH080
gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix protein 1A, putative; 28707-26892 [Arabidopsis
thaliana]
gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|332193674|gb|AEE31795.1| transcription factor bHLH80 [Arabidopsis thaliana]
Length = 259
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ERVRR +IS+R++ LQ L
Sbjct: 181 VRAKRGCATHPRSIAERVRRTRISDRIRRLQEL 213
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT+ SL R RRE+I+ER++ LQNL
Sbjct: 238 RAGRGSATDPQSLYARKRRERINERLRILQNL 269
>gi|351722090|ref|NP_001236464.1| uncharacterized protein LOC100527723 [Glycine max]
gi|255633050|gb|ACU16880.1| unknown [Glycine max]
Length = 157
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ERVRR +IS+R++ LQ L
Sbjct: 81 VRAKRGCATHPRSIAERVRRTRISDRIRKLQEL 113
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT+ SL R RRE+I+ER++ LQNL
Sbjct: 275 RASRGSATDPQSLYARKRRERINERLRVLQNL 306
>gi|356557136|ref|XP_003546874.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 445
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ER RR +ISER+K LQ+L
Sbjct: 361 IRAKRGFATHPRSIAERERRTRISERIKKLQDL 393
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA +G AT+ SL R RRE+I+ER++ LQNL
Sbjct: 224 TRASKGAATDPQSLYARKRRERINERLRILQNL 256
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT+ SL R RRE+I+ER++ LQNL
Sbjct: 94 RASRGSATDPQSLYARKRRERINERLRILQNL 125
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 65 HVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+ RA RG AT+ SL R RRE+I+ER++ LQ L
Sbjct: 189 YTRASRGAATDPQSLYARKRRERINERLRILQKL 222
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 20/32 (62%), Positives = 24/32 (75%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT+ SL R RRE+I+ER+K LQNL
Sbjct: 273 RATRGAATDPQSLYARKRRERINERLKILQNL 304
>gi|449447621|ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
gi|449522500|ref|XP_004168264.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
Length = 244
Score = 40.8 bits (94), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ERVRR +IS+R++ LQ +
Sbjct: 168 VRAKRGCATHPRSIAERVRRTRISDRIRKLQEV 200
>gi|388517565|gb|AFK46844.1| unknown [Medicago truncatula]
Length = 194
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +IS+R++ LQ L
Sbjct: 118 IRAKRGFATHPRSIAERVRRTRISDRIRKLQEL 150
>gi|357440517|ref|XP_003590536.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479584|gb|AES60787.1| Transcription factor UNE12 [Medicago truncatula]
Length = 282
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%)
Query: 56 SDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
+ QP VRARRGQAT+ HS+ ER+RRE+I+ER++ LQ L ++ +T R+
Sbjct: 110 APQPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRA 162
>gi|357440519|ref|XP_003590537.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479585|gb|AES60788.1| Transcription factor UNE12 [Medicago truncatula]
Length = 285
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%)
Query: 56 SDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
+ QP VRARRGQAT+ HS+ ER+RRE+I+ER++ LQ L ++ +T R+
Sbjct: 113 APQPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRA 165
>gi|302754898|ref|XP_002960873.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
gi|300171812|gb|EFJ38412.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
Length = 638
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RARRG AT+ S+ ERVRR KISE +K L +L
Sbjct: 557 LRARRGCATHPRSVAERVRRTKISEGIKRLHDL 589
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT+ SL R RRE+I+ER++ LQ L
Sbjct: 264 TRASRGAATDPQSLYARKRRERINERLRILQTL 296
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT+ SL R RRE+I+ER++ LQ+L
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHL 269
>gi|357142794|ref|XP_003572696.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 317
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 3 LVNSHGEAKQAFGESSSDSNEVEFSGGGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEE 62
+V E++ G E +FSG PS+LE G + ++ +Q
Sbjct: 187 IVGPWDESRDIIGTLDIGGYESQFSG---MASPSSLELAGMDKYMQAQQQQDQV------ 237
Query: 63 YIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ER RR +ISE+++ LQ+L
Sbjct: 238 AFKVRAKRGCATHPRSIAERERRTRISEKLRKLQDL 273
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT+ SL R RRE+I+ER+K LQ++
Sbjct: 270 TRASRGAATDPQSLYARKRRERINERLKILQHI 302
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT+ SL R RRE+I+ER++ LQ+L
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHL 269
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA+RG AT+ S+ R RREKI+ER+K LQ L
Sbjct: 471 RAKRGSATDPQSVYARHRREKINERLKTLQRL 502
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT+ SL R RRE+I+ER++ LQ+L
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHL 269
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT+ SL R RRE+I+ER++ LQ+L
Sbjct: 248 RASRGSATDPQSLYARKRRERINERLRILQSL 279
>gi|326519825|dbj|BAK00285.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ER RR +IS+R++ LQ+L
Sbjct: 300 VRAKRGCATHPRSIAERERRTRISKRLRRLQDL 332
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA+RG AT+ S+ R RRE+I+ER+K LQ+L
Sbjct: 212 RAKRGSATDPQSVYARHRRERINERLKTLQHL 243
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT+ SL R RRE+I+ER++ LQ L
Sbjct: 185 RASRGSATDPQSLYARKRRERINERLRILQTL 216
>gi|226510391|ref|NP_001150862.1| LOC100284495 [Zea mays]
gi|195642440|gb|ACG40688.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 359
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRARRG AT+ S+ ER RR +IS+R+K LQ+L
Sbjct: 280 VRARRGCATHPRSIAERERRTRISKRLKKLQDL 312
>gi|357126351|ref|XP_003564851.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 373
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ER RR +IS+R++ LQ+L
Sbjct: 295 VRAKRGCATHPRSIAERERRTRISKRLRKLQDL 327
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT+ SL R RRE+I+ER++ LQ L
Sbjct: 237 TRATRGSATDPQSLYARKRRERINERLRILQKL 269
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT+ SL R RRE+I+ER++ LQ L
Sbjct: 237 TRATRGSATDPQSLYARKRRERINERLRILQKL 269
>gi|388520611|gb|AFK48367.1| unknown [Lotus japonicus]
Length = 251
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ERVRR +ISE++K L+ L
Sbjct: 167 IRAKRGFATHPRSVAERVRRTRISEKIKKLEGL 199
>gi|242062246|ref|XP_002452412.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
gi|241932243|gb|EES05388.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
Length = 338
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ER RR +ISE+++ LQ+L
Sbjct: 262 VRAKRGCATHPRSIAERERRTRISEKLRKLQDL 294
>gi|413937661|gb|AFW72212.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ER RR +ISE+++ LQ+L
Sbjct: 247 FKVRAKRGCATHPRSIAERERRTRISEKLRKLQDL 281
>gi|38345229|emb|CAE01659.2| OSJNBa0084K20.3 [Oryza sativa Japonica Group]
gi|38347437|emb|CAE02480.2| OSJNBa0076N16.1 [Oryza sativa Japonica Group]
gi|222629103|gb|EEE61235.1| hypothetical protein OsJ_15277 [Oryza sativa Japonica Group]
Length = 218
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 16/111 (14%)
Query: 4 VNSHGEAKQAFGE------SSSDSNEVEFS-------GGGGQDEPSTLEGTGGNLLL-RG 49
V++H ++F S DSN + FS G D +TL L+ R
Sbjct: 56 VSTHDHVVRSFSSGGFSIGSWEDSNSIVFSTSTGKSGAHGNDDIIATLSNYESQLVAPRE 115
Query: 50 KQGSQTSDQPKEEYI--HVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
G + Q + + + VRA+RG AT+ S+ ER RR +ISE+++ LQ L
Sbjct: 116 MAGVEKYLQMQHDQVPFRVRAKRGCATHPRSIAERERRTRISEKLRKLQAL 166
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG AT+ SL R RRE+I+ER++ LQ L
Sbjct: 238 RASRGSATDPQSLYARKRRERINERLRILQKL 269
>gi|312281971|dbj|BAJ33851.1| unnamed protein product [Thellungiella halophila]
Length = 310
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
QP VRARRGQAT+ HS+ ER+RRE+I+ER++ LQ L + +T R+
Sbjct: 138 QPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRA 188
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 7/66 (10%)
Query: 37 TLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRAR----RGQATNSHSLVERVRREKISERM 92
++E G+L ++G++ ++ P E VR R R +A H+L E+ RR +I+E+M
Sbjct: 89 SMENDLGDLSCDSEKGAEVAEVPSET---VRPRNSSKRSRAAEVHNLSEKRRRSRINEKM 145
Query: 93 KFLQNL 98
K LQNL
Sbjct: 146 KALQNL 151
>gi|297809891|ref|XP_002872829.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
gi|297318666|gb|EFH49088.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
QP VRARRGQAT+ HS+ ER+RRE+I+ER++ LQ L + +T R+
Sbjct: 138 QPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRA 188
>gi|255572912|ref|XP_002527387.1| DNA binding protein, putative [Ricinus communis]
gi|223533239|gb|EEF34994.1| DNA binding protein, putative [Ricinus communis]
Length = 377
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ER RR +IS R+K LQ+L
Sbjct: 299 IRAKRGCATHPRSIAERERRTRISGRLKKLQDL 331
>gi|356514806|ref|XP_003526094.1| PREDICTED: uncharacterized protein LOC100782991 [Glycine max]
Length = 390
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 71 GQATNSHSLVERVRREKISERMKFLQNLSLAIEET 105
GQ T+ HS+ ER+ RE+I+ER++ LQ L ++ +T
Sbjct: 319 GQTTDPHSIAERLHRERIAERIRALQELVPSVNKT 353
>gi|223702400|gb|ACN21631.1| putative basic helix-loop-helix protein BHLH4 [Lotus japonicus]
Length = 275
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 55 TSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
++ P VRARRGQAT+ HS+ ER+RRE+I+ER++ LQ L ++ +T R+
Sbjct: 112 SAPHPPPMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRA 165
>gi|223702398|gb|ACN21630.1| putative basic helix-loop-helix protein BHLH3 [Lotus japonicus]
Length = 297
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 14/95 (14%)
Query: 28 GGGGQDEPSTLEGTGGNL-----------LLRGKQGSQT---SDQPKEEYIHVRARRGQA 73
GGGG +P G+G + G+ S T + P VRARRGQA
Sbjct: 83 GGGGFLKPEDASGSGKRFRDDVVDGRPKNVYHGQPMSTTMPAAPHPPAMRPRVRARRGQA 142
Query: 74 TNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
T+ HS+ ER+RRE+I+ER++ LQ L ++ +T R+
Sbjct: 143 TDPHSIAERLRRERIAERIRALQELVPSVNKTDRA 177
>gi|21593792|gb|AAM65759.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
QP VRARRGQAT+ HS+ ER+RRE+I+ER++ LQ L + +T R+
Sbjct: 138 QPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRA 188
>gi|20127058|gb|AAM10948.1|AF488592_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
QP VRARRGQAT+ HS+ ER+RRE+I+ER++ LQ L + +T R+
Sbjct: 138 QPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRA 188
>gi|18411987|ref|NP_567245.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|79324985|ref|NP_001031577.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|75277341|sp|O22768.2|UNE12_ARATH RecName: Full=Transcription factor UNE12; AltName: Full=Basic
helix-loop-helix protein 59; Short=AtbHLH59; Short=bHLH
59; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 12;
AltName: Full=Transcription factor EN 93; AltName:
Full=bHLH transcription factor bHLH059
gi|13605859|gb|AAK32915.1|AF367328_1 AT4g02590/T10P11_13 [Arabidopsis thaliana]
gi|3892050|gb|AAC78259.1| hypothetical protein [Arabidopsis thaliana]
gi|7269019|emb|CAB80752.1| hypothetical protein [Arabidopsis thaliana]
gi|23506061|gb|AAN28890.1| At4g02590/T10P11_13 [Arabidopsis thaliana]
gi|222422973|dbj|BAH19471.1| AT4G02590 [Arabidopsis thaliana]
gi|332656799|gb|AEE82199.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656800|gb|AEE82200.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 310
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
QP VRARRGQAT+ HS+ ER+RRE+I+ER++ LQ L + +T R+
Sbjct: 138 QPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRA 188
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA RG +T+ SL R RRE+I+ER+K LQ L
Sbjct: 215 ARAARGASTDPQSLYARKRRERINERLKTLQTL 247
>gi|356548947|ref|XP_003542860.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 438
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ER RR +IS R+K LQ+L
Sbjct: 360 IRAKRGFATHPRSIAERERRTRISARIKKLQDL 392
>gi|186511471|ref|NP_001118919.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656801|gb|AEE82201.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 247
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 58 QPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
QP VRARRGQAT+ HS+ ER+RRE+I+ER++ LQ L + +T R+
Sbjct: 75 QPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRA 125
>gi|115459116|ref|NP_001053158.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|113564729|dbj|BAF15072.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|215695534|dbj|BAG90725.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195100|gb|EEC77527.1| hypothetical protein OsI_16412 [Oryza sativa Indica Group]
Length = 369
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ER RR +ISE+++ LQ L
Sbjct: 285 VRAKRGCATHPRSIAERERRTRISEKLRKLQAL 317
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 73 ATNSHSLVERVRREKISERMKFLQNL 98
AT+ HS+ ER+RRE+I+ERMK LQ L
Sbjct: 220 ATDPHSIAERLRRERIAERMKSLQEL 245
>gi|356542383|ref|XP_003539646.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 434
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ER RR +IS R+K LQ+L
Sbjct: 356 IRAKRGFATHPRSIAERERRTRISARIKKLQDL 388
>gi|218191124|gb|EEC73551.1| hypothetical protein OsI_07971 [Oryza sativa Indica Group]
Length = 217
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ER RR +ISE+++ LQ L
Sbjct: 141 VRAKRGCATHPRSIAERERRTRISEKLRKLQEL 173
>gi|224131550|ref|XP_002321112.1| predicted protein [Populus trichocarpa]
gi|222861885|gb|EEE99427.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ER RR +IS ++K LQ+L
Sbjct: 263 IRAKRGCATHPRSIAERERRTRISGKLKTLQDL 295
>gi|302767438|ref|XP_002967139.1| hypothetical protein SELMODRAFT_86848 [Selaginella
moellendorffii]
gi|300165130|gb|EFJ31738.1| hypothetical protein SELMODRAFT_86848 [Selaginella
moellendorffii]
Length = 110
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RARRG AT+ S+ ERVRR KISE +K L +L
Sbjct: 44 LRARRGCATHPRSVAERVRRTKISEGIKRLHDL 76
>gi|449458442|ref|XP_004146956.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
gi|449503810|ref|XP_004162188.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 316
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 55 TSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
+ P VRARRGQAT+ HS+ ER+RRE+I+ER++ LQ L ++ +T R+
Sbjct: 143 AAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRA 196
>gi|312282747|dbj|BAJ34239.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 8/63 (12%)
Query: 54 QTSDQPKEEYIH--------VRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEET 105
Q QP H VRARRGQAT+ HS+ ER+RRE+I+ER++ LQ L + +T
Sbjct: 130 QPMSQPAPPMPHQQSSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVSKT 189
Query: 106 GRS 108
R+
Sbjct: 190 DRA 192
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RAR+G A + S+ R RRE+IS+R+K LQ L
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQEL 390
>gi|297848526|ref|XP_002892144.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337986|gb|EFH68403.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 306
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 8/63 (12%)
Query: 54 QTSDQPKEEYIH--------VRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEET 105
Q QP H VRARRGQAT+ HS+ ER+RRE+I+ER++ LQ L + +T
Sbjct: 128 QPMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKT 187
Query: 106 GRS 108
R+
Sbjct: 188 DRA 190
>gi|356509769|ref|XP_003523618.1| PREDICTED: uncharacterized protein LOC100779202 [Glycine max]
Length = 332
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+A +G AT+ SL R RRE+I +R++ LQNL
Sbjct: 240 TKASKGSATDPQSLYARKRRERIDDRLRILQNL 272
>gi|255559915|ref|XP_002520976.1| DNA binding protein, putative [Ricinus communis]
gi|223539813|gb|EEF41393.1| DNA binding protein, putative [Ricinus communis]
Length = 299
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 56 SDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
+ P VRARRGQAT+ HS+ ER+RRE+I+ER++ LQ L ++ +T R+
Sbjct: 127 APHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRA 179
>gi|145334165|ref|NP_001078463.1| transcription factor bHLH127 [Arabidopsis thaliana]
gi|75296238|sp|Q7XHI7.1|BH127_ARATH RecName: Full=Transcription factor bHLH127; AltName: Full=Basic
helix-loop-helix protein 127; Short=AtbHLH127;
Short=bHLH 127; AltName: Full=bHLH transcription factor
bHLH127
gi|33111973|emb|CAE12173.1| putative bHLH127 transcription factor [Arabidopsis thaliana]
gi|332660148|gb|AEE85548.1| transcription factor bHLH127 [Arabidopsis thaliana]
Length = 307
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 69 RRGQATNSHSLVERVRREKISERMKFLQNL 98
+R +A H+L ER RREKI+ERMK LQ L
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQL 176
>gi|359478054|ref|XP_002268535.2| PREDICTED: transcription factor bHLH128 [Vitis vinifera]
Length = 357
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ER RR +IS ++K LQ+L
Sbjct: 279 VRAKRGCATHPRSIAERERRTRISGKLKKLQDL 311
>gi|356504971|ref|XP_003521266.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 15/78 (19%)
Query: 31 GQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISE 90
GQ P+T+ +R + VRARRGQAT+ HS+ ER+RRE+I+E
Sbjct: 110 GQPMPTTMPAAPHPPAIRPR---------------VRARRGQATDPHSIAERLRRERIAE 154
Query: 91 RMKFLQNLSLAIEETGRS 108
R++ LQ L ++ +T R+
Sbjct: 155 RIRALQELVPSVNKTDRA 172
>gi|356572238|ref|XP_003554277.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 35/43 (81%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
VRARRGQAT+ HS+ ER+RRE+I+ER++ LQ L ++ +T R+
Sbjct: 130 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRA 172
>gi|302805717|ref|XP_002984609.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
gi|300147591|gb|EFJ14254.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
Length = 298
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
R+R+G A + S+ R RRE+IS+R+K LQ+L
Sbjct: 234 RSRQGTANDPQSIAARQRRERISQRLKILQDL 265
>gi|302793827|ref|XP_002978678.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
gi|300153487|gb|EFJ20125.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
Length = 298
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
R+R+G A + S+ R RRE+IS+R+K LQ+L
Sbjct: 234 RSRQGTANDPQSIAARQRRERISQRLKILQDL 265
>gi|297745167|emb|CBI39159.3| unnamed protein product [Vitis vinifera]
Length = 410
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ER RR +IS ++K LQ+L
Sbjct: 332 VRAKRGCATHPRSIAERERRTRISGKLKKLQDL 364
>gi|224065030|ref|XP_002301638.1| predicted protein [Populus trichocarpa]
gi|222843364|gb|EEE80911.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 6 SHGEAKQAFG-ESSSDSNEVEFSG-------GGGQDEPSTLEGTGGNLL-LRGKQGSQTS 56
+H + FG ES + N + FSG G D S G +L L + +
Sbjct: 7 THSYSAAGFGMESWDNPNSIVFSGPPSKQARNGDGDIYSCFNGLETQVLNLEIETVEKLL 66
Query: 57 DQPKEEY-IHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
P++ +RA+RG AT+ S+ ER RR +IS ++K LQ+L
Sbjct: 67 HVPEDSVPCKIRAKRGFATHPRSIAERERRTRISGKLKKLQDL 109
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RAR+G A + S+ R RRE+IS+R+K LQ L
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQEL 390
>gi|356510428|ref|XP_003523940.1| PREDICTED: uncharacterized protein LOC100776012 [Glycine max]
Length = 217
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 59 PKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
P EE + R Q +S +V RREKISERMK LQ+L
Sbjct: 171 PYEEAREEKKLRNQCEDSSDMVAEARREKISERMKILQDL 210
>gi|6850309|gb|AAF29386.1|AC009999_6 Contains similarity to bHLH transcription factor GBOF-1 from Tulipa
gesneriana gb|AF185269. EST gb|AI996380 comes from this
gene [Arabidopsis thaliana]
Length = 323
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ER RR +IS ++K LQ+L
Sbjct: 283 IRAKRGCATHPRSIAERERRTRISGKLKKLQDL 315
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA+RG AT+ S+ R RRE+I+ER++ LQ L
Sbjct: 238 RAKRGSATDPQSIYARQRRERINERLRALQGL 269
>gi|21554238|gb|AAM63313.1| Contains similarity to bHLH transcription factor GBOF-1 from Tulipa
gesneriana gb|AF185269 [Arabidopsis thaliana]
Length = 362
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ER RR +IS ++K LQ+L
Sbjct: 283 IRAKRGCATHPRSIAERERRTRISGKLKKLQDL 315
>gi|18390573|ref|NP_563749.1| transcription factor bHLH128 [Arabidopsis thaliana]
gi|75299737|sp|Q8H102.1|BH128_ARATH RecName: Full=Transcription factor bHLH128; AltName: Full=Basic
helix-loop-helix protein 128; Short=AtbHLH128;
Short=bHLH 128; AltName: Full=Transcription factor EN
74; AltName: Full=bHLH transcription factor bHLH128
gi|24030386|gb|AAN41354.1| unknown protein [Arabidopsis thaliana]
gi|332189775|gb|AEE27896.1| transcription factor bHLH128 [Arabidopsis thaliana]
Length = 362
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ER RR +IS ++K LQ+L
Sbjct: 283 IRAKRGCATHPRSIAERERRTRISGKLKKLQDL 315
>gi|357445143|ref|XP_003592849.1| Transcription factor bHLH128 [Medicago truncatula]
gi|355481897|gb|AES63100.1| Transcription factor bHLH128 [Medicago truncatula]
Length = 343
Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ER RR +IS ++K LQ+L
Sbjct: 265 IRAKRGCATHPRSIAERERRTRISGKLKKLQDL 297
>gi|224066311|ref|XP_002302077.1| predicted protein [Populus trichocarpa]
gi|222843803|gb|EEE81350.1| predicted protein [Populus trichocarpa]
Length = 300
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 59 PKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
P VRARRGQAT+ HS+ ER+RRE+I+ER++ LQ L ++ +T R+
Sbjct: 131 PPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRA 180
>gi|225437207|ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297735488|emb|CBI17928.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 35/43 (81%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
VRARRGQAT+ HS+ ER+RRE+I+ER++ LQ L ++ +T R+
Sbjct: 127 VRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRA 169
>gi|242076304|ref|XP_002448088.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
gi|241939271|gb|EES12416.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
Length = 226
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ER RR +ISE+++ LQ L
Sbjct: 146 VRAKRGCATHPRSIAERERRTRISEKLRKLQAL 178
>gi|222623194|gb|EEE57326.1| hypothetical protein OsJ_07428 [Oryza sativa Japonica Group]
Length = 103
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ER RR +ISE+++ LQ L
Sbjct: 27 VRAKRGCATHPRSIAERERRTRISEKLRKLQEL 59
>gi|312282787|dbj|BAJ34259.1| unnamed protein product [Thellungiella halophila]
Length = 353
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ER RR +IS ++K LQ+L
Sbjct: 274 IRAKRGCATHPRSIAERERRTRISGKLKKLQDL 306
>gi|297843372|ref|XP_002889567.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335409|gb|EFH65826.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 357
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ER RR +IS ++K LQ+L
Sbjct: 278 IRAKRGCATHPRSIAERERRTRISGKLKKLQDL 310
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
+A R AT S SL R RRE+I+ER++ LQNL
Sbjct: 211 KADRRSATESQSLYARKRRERINERLRILQNL 242
>gi|18379045|ref|NP_563672.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|75305862|sp|Q93Y00.1|BH007_ARATH RecName: Full=Transcription factor bHLH7; AltName: Full=Basic
helix-loop-helix protein 7; Short=AtbHLH7; Short=bHLH 7;
AltName: Full=Transcription factor EN 92; AltName:
Full=bHLH transcription factor bHLH007
gi|21735477|gb|AAL55714.2|AF251692_1 putative transcription factor BHLH7 [Arabidopsis thaliana]
gi|15450779|gb|AAK96661.1| Unknown protein [Arabidopsis thaliana]
gi|21387097|gb|AAM47952.1| unknown protein [Arabidopsis thaliana]
gi|332189397|gb|AEE27518.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 302
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 8/63 (12%)
Query: 54 QTSDQPKEEYIH--------VRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEET 105
Q QP H VRARRGQAT+ HS+ ER+RRE+I+ER++ LQ L + +T
Sbjct: 124 QPMSQPAPPMPHQQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKT 183
Query: 106 GRS 108
R+
Sbjct: 184 DRA 186
>gi|356576919|ref|XP_003556577.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 286
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ER RR +IS ++K LQ+L
Sbjct: 208 IRAKRGCATHPRSIAERERRTRISGKLKKLQDL 240
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
R +RG AT+ S+ R RREKI+ER++ LQ+L
Sbjct: 448 RVQRGSATDPQSVHARARREKIAERLRKLQHL 479
>gi|413918730|gb|AFW58662.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 223
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
VRA+RG AT+ S+ ER RR +ISE+++ LQ L
Sbjct: 143 VRAKRGCATHPRSIAERERRTRISEKLRKLQAL 175
>gi|334182257|ref|NP_001184895.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|4587574|gb|AAD25805.1|AC006550_13 Contains PF|00010 helix-loop-helix DNA-binding domain. ESTs
gb|T45640 and gb|T22783 come from this gene [Arabidopsis
thaliana]
gi|332189398|gb|AEE27519.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 297
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 34/43 (79%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
VRARRGQAT+ HS+ ER+RRE+I+ER++ LQ L + +T R+
Sbjct: 139 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRA 181
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
ARR +A H+L ER RR++I+E+MK LQ L +T ++
Sbjct: 262 ARRSRAAEVHNLSERRRRDRINEKMKALQELIPHCNKTDKA 302
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 64 IHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+ RA++G A + S+ R RRE+IS+R+K LQ L
Sbjct: 406 LKPRAKQGCANDPQSIAARQRRERISDRLKILQEL 440
>gi|356567480|ref|XP_003551947.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 397
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNL 98
ARR +A H+L ER RR++I+E+MK LQ L
Sbjct: 197 ARRNRAAEVHNLSERRRRDRINEKMKALQQL 227
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA R T S+ R RRE+I+ER+K LQNL
Sbjct: 227 RAGRSATTEPQSIYARKRRERINERLKILQNL 258
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA++G A + S+ R RRE+IS+R+K LQ L
Sbjct: 409 RAKQGCANDPQSIAARQRRERISDRLKILQEL 440
>gi|168029799|ref|XP_001767412.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681308|gb|EDQ67736.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 825
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
R R G AT+ S+ R RREK ++R++ LQ+L
Sbjct: 676 RRRHGTATDPQSIAARTRREKFTDRIRILQSL 707
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 9/52 (17%)
Query: 56 SDQPKEEYIHVR---------ARRGQATNSHSLVERVRREKISERMKFLQNL 98
SD +EEY+ V+ ++R +A H+L ER RR++I+E+M+ LQ L
Sbjct: 430 SDDVEEEYMGVKKGDHARGMGSKRSRAAEVHNLSERRRRDRINEKMRALQEL 481
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
gi|297315308|gb|EFH45731.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
Length = 1780
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 69 RRGQATNSHSLVERVRREKISERMKFLQNL 98
+R +A H+L ER RREKI+E+MK LQ L
Sbjct: 135 KRSRAAEMHNLAERRRREKINEKMKTLQEL 164
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 69 RRGQATNSHSLVERVRREKISERMKFLQNL 98
+R +A H+L ER RREKI+E+MK LQ L
Sbjct: 1139 KRSRAAEMHNLAERRRREKINEKMKTLQEL 1168
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 69 RRGQATNSHSLVERVRREKISERMKFLQNL 98
+R +A H+L ER RREKI+E+MK LQ L
Sbjct: 1569 KRSRAAEMHNLAERRRREKINEKMKTLQEL 1598
>gi|356526934|ref|XP_003532070.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 266
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNL 98
ARR +A H+L ER RR++I+E+MK LQ L
Sbjct: 64 ARRNRAAEVHNLSERRRRDRINEKMKALQQL 94
>gi|31043851|emb|CAD32238.1| BP-5 protein [Oryza sativa]
Length = 335
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNLSL 100
ARR +A H+L ER RR++I+E+M+ LQ L L
Sbjct: 162 ARRSRAAEVHNLSERRRRDRINEKMRALQELEL 194
>gi|449468734|ref|XP_004152076.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 370
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ER RR +IS ++K LQ L
Sbjct: 292 IRAKRGCATHPRSIAERERRTRISGKLKKLQEL 324
>gi|115454133|ref|NP_001050667.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|50428697|gb|AAT77048.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108709850|gb|ABF97645.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|113549138|dbj|BAF12581.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|125587132|gb|EAZ27796.1| hypothetical protein OsJ_11741 [Oryza sativa Japonica Group]
Length = 310
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 20/26 (76%)
Query: 73 ATNSHSLVERVRREKISERMKFLQNL 98
AT+ SL R RRE+I+ER+K LQNL
Sbjct: 228 ATDPQSLYARKRRERINERLKILQNL 253
>gi|125544879|gb|EAY91018.1| hypothetical protein OsI_12623 [Oryza sativa Indica Group]
Length = 310
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 20/26 (76%)
Query: 73 ATNSHSLVERVRREKISERMKFLQNL 98
AT+ SL R RRE+I+ER+K LQNL
Sbjct: 228 ATDPQSLYARKRRERINERLKILQNL 253
>gi|449521074|ref|XP_004167556.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 356
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 66 VRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+RA+RG AT+ S+ ER RR +IS ++K LQ L
Sbjct: 292 IRAKRGCATHPRSIAERERRTRISGKLKKLQEL 324
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
ARR +A H+L ER RR++I+E+M+ LQ L +T ++
Sbjct: 324 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKA 364
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
ARR +A H+L ER RR++I+E+M+ LQ L +T ++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKA 354
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
ARR +A H+L ER RR++I+E+M+ LQ L +T ++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKA 354
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNL 98
A+R +A H+L ER RR++I+E+MK LQ L
Sbjct: 304 AKRSRAAEVHNLSERRRRDRINEKMKALQEL 334
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
ARR +A H+L ER RR++I+E+M+ LQ L +T ++
Sbjct: 311 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKA 351
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNL 98
ARR +A H+L ER RR++I+E+M+ LQ L
Sbjct: 329 ARRSRAAEVHNLSERRRRDRINEKMRALQEL 359
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNL 98
ARR +A H+L ER RR++I+E+M+ LQ L
Sbjct: 329 ARRSRAAEVHNLSERRRRDRINEKMRALQEL 359
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
ARR +A H+L ER RR++I+E+M+ LQ L +T ++
Sbjct: 295 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKA 335
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNL 98
A+R +A H+L ER RR++I+E+MK LQ L
Sbjct: 266 AKRSRAAEVHNLSERRRRDRINEKMKALQEL 296
>gi|168057236|ref|XP_001780622.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667988|gb|EDQ54605.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 835
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
R R G AT+ S+ R RREK ++R++ LQ L
Sbjct: 675 RRRHGTATDPQSIAARTRREKFTDRIRILQGL 706
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
ARR +A H+L ER RR++I+E+M+ LQ L +T ++
Sbjct: 32 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKA 72
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RA A + SL R RRE+I+ER++ LQNL
Sbjct: 265 RATTSAAADPQSLYARKRRERINERLRILQNL 296
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 24/31 (77%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNL 98
++RG+A H+L ER RR++I+E+M+ LQ L
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQEL 347
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 24/31 (77%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNL 98
++RG+A H+L ER RR++I+E+M+ LQ L
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQEL 347
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 24/31 (77%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNL 98
++RG+A H+L ER RR++I+E+M+ LQ L
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQEL 347
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 24/31 (77%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNL 98
++RG+A H+L ER RR++I+E+M+ LQ L
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQEL 347
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 69 RRGQATNSHSLVERVRREKISERMKFLQNL 98
+R +A H+L ER RR++I+ERMK LQ L
Sbjct: 210 KRSRAAEVHNLSERKRRDRINERMKALQEL 239
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 24/31 (77%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNL 98
++RG+A H+L ER RR++I+E+M+ LQ L
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQEL 347
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 69 RRGQATNSHSLVERVRREKISERMKFLQNL 98
+R +A H+L ER RR++I+ERMK LQ L
Sbjct: 210 KRSRAAEVHNLSERKRRDRINERMKALQEL 239
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 69 RRGQATNSHSLVERVRREKISERMKFLQNL 98
+R +A H+L ER RR++I+ERMK LQ L
Sbjct: 281 KRSRAAEVHNLSERKRRDRINERMKALQEL 310
>gi|240256101|ref|NP_194609.5| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
gi|378405153|sp|Q9SVU7.2|BH056_ARATH RecName: Full=Putative transcription factor bHLH056; AltName:
Full=Basic helix-loop-helix protein 56; Short=AtbHLH56;
Short=bHLH 56; AltName: Full=Transcription factor EN
106; AltName: Full=bHLH transcription factor bHLH056
gi|332660146|gb|AEE85546.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
Length = 445
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 69 RRGQATNSHSLVERVRREKISERMKFLQNL 98
+R + H+L ER RREKI+E+MK LQ L
Sbjct: 252 KRSRTAEMHNLAERRRREKINEKMKTLQQL 281
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 69 RRGQATNSHSLVERVRREKISERMKFLQNL 98
+R +A H+L ER RR++I+ERMK LQ L
Sbjct: 281 KRSRAAEVHNLSERKRRDRINERMKALQEL 310
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNL 98
+R +A H+L ER RR++I+ERMK LQ L
Sbjct: 289 TKRSRAAEVHNLSERKRRDRINERMKALQEL 319
>gi|225446765|ref|XP_002278399.1| PREDICTED: transcription factor PIF5-like [Vitis vinifera]
Length = 531
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 69 RRGQATNSHSLVERVRREKISERMKFLQNL 98
RR +A H+L ER RR++I+E+MK LQ L
Sbjct: 335 RRSRAAEVHNLSERRRRDRINEKMKALQEL 364
>gi|344174241|emb|CCA86029.1| putative NAD-glutamate dehydrogenase (gdhB) [Ralstonia syzygii R24]
Length = 1654
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 16 ESSSDSNEVEFSGGGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPK-EEYIHVRARR 70
+ + V +GGGG P+ L G ++ + G +TSD+ + E YIH+ R
Sbjct: 131 QRDASGTRVAVAGGGGVQRPAALAGDMPGTIVEDEAGGKTSDEARFESYIHIEVDR 186
>gi|300691936|ref|YP_003752931.1| NAD-glutamate dehydrogenase (gdhB) [Ralstonia solanacearum PSI07]
gi|299078996|emb|CBJ51657.1| putative NAD-glutamate dehydrogenase (gdhB) [Ralstonia solanacearum
PSI07]
Length = 1654
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 16 ESSSDSNEVEFSGGGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPK-EEYIHVRARR 70
+ + V +GGGG P+ L G ++ + G +TSD+ + E YIH+ R
Sbjct: 131 QRDASGTRVAVAGGGGVQRPAALAGDMPGTIVEDEAGGKTSDEARFESYIHIEVDR 186
>gi|22327541|ref|NP_680385.1| transcription factor bHLH139 [Arabidopsis thaliana]
gi|122213858|sp|Q3E7L7.1|BH139_ARATH RecName: Full=Transcription factor bHLH139; AltName: Full=Basic
helix-loop-helix protein 139; Short=AtbHLH139;
Short=bHLH 139; AltName: Full=Transcription factor EN
116; AltName: Full=bHLH transcription factor bHLH139
gi|332007536|gb|AED94919.1| transcription factor bHLH139 [Arabidopsis thaliana]
Length = 223
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
+A RG A++ SL R RRE+I++R+K LQ+L
Sbjct: 133 KANRGIASDPQSLYARKRRERINDRLKTLQSL 164
>gi|302143504|emb|CBI22065.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 69 RRGQATNSHSLVERVRREKISERMKFLQNL 98
RR +A H+L ER RR++I+E+MK LQ L
Sbjct: 335 RRSRAAEVHNLSERRRRDRINEKMKALQEL 364
>gi|4218118|emb|CAA22972.1| putative protein [Arabidopsis thaliana]
gi|7269735|emb|CAB81468.1| putative protein [Arabidopsis thaliana]
Length = 478
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 69 RRGQATNSHSLVERVRREKISERMKFLQNL 98
+R + H+L ER RREKI+E+MK LQ L
Sbjct: 252 KRSRTAEMHNLAERRRREKINEKMKTLQQL 281
>gi|222624408|gb|EEE58540.1| hypothetical protein OsJ_09836 [Oryza sativa Japonica Group]
Length = 324
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 74 TNSHSLVERVRREKISERMKFLQNL 98
T+ SL R RRE+I+ER+K LQNL
Sbjct: 240 TDPQSLYARKRRERINERLKILQNL 264
>gi|108706746|gb|ABF94541.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 324
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 74 TNSHSLVERVRREKISERMKFLQNL 98
T+ SL R RRE+I+ER+K LQNL
Sbjct: 240 TDPQSLYARKRRERINERLKILQNL 264
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 34.7 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 54 QTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+++D K+ +R +A H+L ER RR++I+E+M+ LQ L
Sbjct: 342 ESADAKKQARGSTSTKRSRAAEVHNLSERRRRDRINEKMRALQEL 386
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 34.7 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 53 SQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S+ +D+ + RR +A H+L ER RR++I+E+++ LQ L
Sbjct: 210 SEVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQEL 255
>gi|218192293|gb|EEC74720.1| hypothetical protein OsI_10445 [Oryza sativa Indica Group]
Length = 324
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 74 TNSHSLVERVRREKISERMKFLQNL 98
T+ SL R RRE+I+ER+K LQNL
Sbjct: 240 TDPQSLYARKRRERINERLKILQNL 264
>gi|414865666|tpg|DAA44223.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 187
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 10 AKQAFGESSSDSNEVEFSGGGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRAR 69
AK G+ SS SN + S GG PSTL +GG+ G + Q P + R+R
Sbjct: 92 AKNEPGQPSSSSNRI-LSFGG--QPPSTLNFSGGDWTEAGVEAVQ--QMPPDR----RSR 142
Query: 70 RGQATNSHSLVERVRREKISERMKFLQNL 98
T H + ER RREK+ ++ L +
Sbjct: 143 THWNTQEHVIAERKRREKMQQQFVTLATI 171
>gi|140084368|gb|ABO84934.1| Rhd6-like 5 [Physcomitrella patens]
Length = 67
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 71 GQATNSHSLVERVRREKISERMKFLQNL 98
G AT+ S+ R RREKI+ER+K LQNL
Sbjct: 1 GSATDPQSVYARHRREKINERLKSLQNL 28
>gi|414865661|tpg|DAA44218.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 389
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 10 AKQAFGESSSDSNEVEFSGGGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRAR 69
AK+ G+ SS SN + GG PSTL +G + G + Q P E R+R
Sbjct: 93 AKEEPGQPSSLSNRILSFGG---QPPSTLNFSGSDWTEAGVEAVQ--QMPPER----RSR 143
Query: 70 RGQATNSHSLVERVRREKISERMKFLQNLSLAIEETG 106
T H + ER RREK+ ++ L + + + G
Sbjct: 144 MHWNTQEHVIAERKRREKMQQQFVTLATIVPDLTKMG 180
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 9/60 (15%)
Query: 39 EGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
EG G L+L TS P ++R +A H+L E+ RR +I+E+MK LQNL
Sbjct: 122 EGLEG-LILEAPAKPTTSRNP--------SKRSRAAEVHNLSEKRRRSRINEKMKALQNL 172
>gi|343426362|emb|CBQ69892.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 842
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 15/78 (19%)
Query: 25 EFSGGGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHVRARRGQATNSHSLVERVR 84
E S G P+++ G SQT+ PK+ VR + +AT HS +ER R
Sbjct: 199 EPSAPAGPSRPASVAG----------DASQTASPPKKA---VRDSKRRAT--HSQIERRR 243
Query: 85 REKISERMKFLQNLSLAI 102
REKI++R+ L+++ A
Sbjct: 244 REKINDRLVTLRSIVPAC 261
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNL 98
A+R +A H+L ER RR++I+E+MK LQ L
Sbjct: 310 AKRRRAAEVHNLSERRRRDRINEKMKALQEL 340
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 31/99 (31%)
Query: 26 FSGGGGQDEPSTLEGTGGNLLL-----------------RGKQGSQTSDQPKEEYI---- 64
+ GG PST G GG L+ R ++G +T D +Y+
Sbjct: 234 LACSGGVAAPST--GNGGELMKMIVSETEPVQRTTSLEDRKRKGKETDD---SDYLCYST 288
Query: 65 -HVR----ARRGQATNSHSLVERVRREKISERMKFLQNL 98
VR +R +A H+L ER RR++I+E+MK LQ L
Sbjct: 289 KQVRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQEL 327
>gi|47497385|dbj|BAD19423.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 110
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 52 GSQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
GS S+QP R +R +A H+L E+ RR +I+E+MK LQ+L
Sbjct: 13 GSSESEQPTRP-ARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSL 58
>gi|42567227|ref|NP_194608.3| transcription factor bHLH23 [Arabidopsis thaliana]
gi|75313939|sp|Q9SVU6.1|BH023_ARATH RecName: Full=Transcription factor bHLH23; AltName: Full=Basic
helix-loop-helix protein 23; Short=AtbHLH23; Short=bHLH
23; AltName: Full=Transcription factor EN 107; AltName:
Full=bHLH transcription factor bHLH023
gi|4218119|emb|CAA22973.1| putative protein [Arabidopsis thaliana]
gi|7269734|emb|CAB81467.1| putative protein [Arabidopsis thaliana]
gi|225898825|dbj|BAH30543.1| hypothetical protein [Arabidopsis thaliana]
gi|332660145|gb|AEE85545.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 413
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
++R +A H L ER RR+KI+E MK LQ L +T RS
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRS 313
>gi|42573075|ref|NP_974634.1| transcription factor bHLH23 [Arabidopsis thaliana]
gi|332660144|gb|AEE85544.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 340
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNLSLAIEETGRS 108
++R +A H L ER RR+KI+E MK LQ L +T RS
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRS 313
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 53 SQTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
S+ +D+ + RR +A H+L ER RR++I+E+++ LQ L
Sbjct: 206 SEVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQEL 251
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNL 98
++R +A H+L E+ RR +I+E+MK LQNL
Sbjct: 152 SKRSRAAEVHNLSEKRRRNRINEKMKALQNL 182
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNL 98
++R +A H+L E+ RR +I+E+MK LQNL
Sbjct: 170 SKRSRAAEVHNLSEKRRRSRINEKMKALQNL 200
>gi|140084376|gb|ABO84935.1| Rhd6-like 6 [Physcomitrella patens]
Length = 67
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 71 GQATNSHSLVERVRREKISERMKFLQNL 98
G AT+ S+ R RREKI+ER+K LQNL
Sbjct: 1 GSATDPQSVYARHRREKINERLKNLQNL 28
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 34.3 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 54 QTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+ +++ K H RR +A H+ ER RR++I+E+M+ LQ L
Sbjct: 179 EATEETKSSRRHGSKRRSRAAEVHNQSERRRRDRINEKMRSLQEL 223
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNL 98
++R +A H+L E+ RR KI+E++K LQNL
Sbjct: 87 SKRSRAAEFHNLSEKRRRSKINEKLKALQNL 117
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNL 98
++R +A H+L E+ RR +I+E+MK LQNL
Sbjct: 170 SKRSRAAEVHNLSEKRRRSRINEKMKALQNL 200
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella
moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella
moellendorffii]
Length = 66
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNL 98
++R +A H+L ER RR++I+ERMK LQ L
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQEL 34
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 68 ARRGQATNSHSLVERVRREKISERMKFLQNL 98
++R +A H+L E+ RR +I+E+MK LQNL
Sbjct: 121 SKRSRAAEFHNLSEKRRRSRINEKMKALQNL 151
>gi|414864922|tpg|DAA43479.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 423
Score = 34.3 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 7 HGEAKQAFGESSSDSNEVEFSGGGGQDEPSTLEGTGGNLLLRGKQGSQTSDQPKEEYIHV 66
HG ++ SDS + + + L G L+ + +++++ K +
Sbjct: 327 HGHKRKGMCRDESDSRSEKI-----ESKYRCLSGIELMRKLQDVECEESTEETKPWQRNG 381
Query: 67 RARRGQATNSHSLVERVRREKISERMKFLQNL 98
RR +A H+L ER RR++I E+M+ LQ L
Sbjct: 382 PKRRTRAAEVHNLSERRRRDRIKEKMRVLQEL 413
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 34.3 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 54 QTSDQPKEEYIHVRARRGQATNSHSLVERVRREKISERMKFLQNL 98
+ +++ K H RR +A H+ ER RR++I+E+M+ LQ L
Sbjct: 188 EATEETKSSRRHGSKRRSRAAEVHNQSERRRRDRINEKMRSLQEL 232
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.305 0.125 0.330
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,632,692,928
Number of Sequences: 23463169
Number of extensions: 66036876
Number of successful extensions: 223332
Number of sequences better than 100.0: 924
Number of HSP's better than 100.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 95
Number of HSP's that attempted gapping in prelim test: 222427
Number of HSP's gapped (non-prelim): 977
length of query: 108
length of database: 8,064,228,071
effective HSP length: 76
effective length of query: 32
effective length of database: 6,281,027,227
effective search space: 200992871264
effective search space used: 200992871264
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 69 (31.2 bits)