BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040763
(360 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/301 (35%), Positives = 172/301 (57%), Gaps = 8/301 (2%)
Query: 55 IDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYK 114
+ + K FS +EL A+++F+ ILG+GG G VYKGRL DG ++AVK+ K EE +
Sbjct: 22 LGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLK-----EERXQ 76
Query: 115 LEE--FINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYP 172
E F E+ ++S HRN+++L G C+ LLVY ++ NG++ L +R +++ P
Sbjct: 77 GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP-P 135
Query: 173 LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD 232
L W R R+A+ A LAYLH I HRD+K+ NILLDE + A V DFG +K +
Sbjct: 136 LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 195
Query: 233 QTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 292
HV ++GT G++ PEY + + ++K+DV+ +GV+L+EL+TG++ + ++V
Sbjct: 196 DXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 255
Query: 293 LAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEVSMELN 352
L + +++ +L ++D + K ++ +A C + +RP M EV L
Sbjct: 256 LLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
Query: 353 G 353
G
Sbjct: 316 G 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 184 bits (468), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 170/300 (56%), Gaps = 6/300 (2%)
Query: 55 IDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYK 114
+ + K FS +EL A+++F ILG+GG G VYKGRL DG ++AVK+ K +E
Sbjct: 14 LGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLK----EERTQG 69
Query: 115 LE-EFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPL 173
E +F E+ ++S HRN+++L G C+ LLVY ++ NG++ L +R +++ PL
Sbjct: 70 GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP-PL 128
Query: 174 TWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ 233
W R R+A+ A LAYLH I HRD+K+ NILLDE + A V DFG +K +
Sbjct: 129 DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 188
Query: 234 THVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 293
HV ++G G++ PEY + + ++K+DV+ +GV+L+EL+TG++ + ++V L
Sbjct: 189 XHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 248
Query: 294 AAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEVSMELNG 353
+ +++ +L ++D + K ++ +A C + +RP M EV L G
Sbjct: 249 LDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 168/291 (57%), Gaps = 17/291 (5%)
Query: 65 ELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFI 124
+L++ATN+F+ ++G G G VYKG L DG +A+K+ E +EEF EI
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRT----PESSQGIEEFETEIET 88
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYP---LTWEMRFRV 181
LS H ++V L+G C E +L+Y+++ NG L +HL+ + P ++WE R +
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY----GSDLPTMSMSWEQRLEI 144
Query: 182 AIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKI 240
I A L YLH+ A I HRD+KS NILLDE + K+ DFG SK +DQTH+ +
Sbjct: 145 CIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVV 201
Query: 241 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHS 300
+GT GY+DPEY +LT+KSDVYSFGVVL E+L + I + +E V+LA + V S
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS--LPREMVNLAEWAVES 259
Query: 301 MRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEVSMEL 351
+L I+D + + + F + A +CL L+ + RP+M +V +L
Sbjct: 260 HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 167/291 (57%), Gaps = 17/291 (5%)
Query: 65 ELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFI 124
+L++ATN+F+ ++G G G VYKG L DG +A+K+ E +EEF EI
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRT----PESSQGIEEFETEIET 88
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYP---LTWEMRFRV 181
LS H ++V L+G C E +L+Y+++ NG L +HL+ + P ++WE R +
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY----GSDLPTMSMSWEQRLEI 144
Query: 182 AIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKI 240
I A L YLH+ A I HRD+KS NILLDE + K+ DFG SK + QTH+ +
Sbjct: 145 CIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVV 201
Query: 241 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHS 300
+GT GY+DPEY +LT+KSDVYSFGVVL E+L + I + +E V+LA + V S
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS--LPREMVNLAEWAVES 259
Query: 301 MRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEVSMEL 351
+L I+D + + + F + A +CL L+ + RP+M +V +L
Sbjct: 260 HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 161/309 (52%), Gaps = 28/309 (9%)
Query: 61 FSSKELDKATNHFNVNRI------LGQGGQGTVYKGRLEDGRIIAVKKSKLAVD--DEEL 112
FS EL TN+F+ I +G+GG G VYKG + + +AVKK VD EEL
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 113 YKLEEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYP 172
++F EI ++++ H N+V+LLG + + LVY ++PNG+L L + P
Sbjct: 74 K--QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPP 129
Query: 173 LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFG----TSKF 228
L+W MR ++A A + +LH HRDIKS NILLDE + AK++DFG + KF
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 229 IAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 288
QT + ++I GT Y+ PE + ++T KSD+YSFGVVL+E++TG + + +
Sbjct: 187 A---QTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAV----DEHR 238
Query: 289 ENVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEVS 348
E L + + D+ M + A ++A +CL KRP +++V
Sbjct: 239 EPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQ 298
Query: 349 MELNGIRGS 357
L + S
Sbjct: 299 QLLQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 160/309 (51%), Gaps = 28/309 (9%)
Query: 61 FSSKELDKATNHFNVNRI------LGQGGQGTVYKGRLEDGRIIAVKKSKLAVD--DEEL 112
FS EL TN+F+ I +G+GG G VYKG + + +AVKK VD EEL
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 113 YKLEEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYP 172
++F EI ++++ H N+V+LLG + + LVY ++PNG+L L + P
Sbjct: 74 K--QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPP 129
Query: 173 LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFG----TSKF 228
L+W MR ++A A + +LH HRDIKS NILLDE + AK++DFG + KF
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 229 IAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 288
QT + +I GT Y+ PE + ++T KSD+YSFGVVL+E++TG + + +
Sbjct: 187 A---QTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAV----DEHR 238
Query: 289 ENVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEVS 348
E L + + D+ M + A ++A +CL KRP +++V
Sbjct: 239 EPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQ 298
Query: 349 MELNGIRGS 357
L + S
Sbjct: 299 QLLQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 159/309 (51%), Gaps = 28/309 (9%)
Query: 61 FSSKELDKATNHFNVNRI------LGQGGQGTVYKGRLEDGRIIAVKKSKLAVD--DEEL 112
FS EL TN+F+ I +G+GG G VYKG + + +AVKK VD EEL
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 113 YKLEEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYP 172
++F EI ++++ H N+V+LLG + + LVY ++PNG+L L + P
Sbjct: 68 K--QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPP 123
Query: 173 LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFG----TSKF 228
L+W MR ++A A + +LH HRDIKS NILLDE + AK++DFG + KF
Sbjct: 124 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 180
Query: 229 IAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 288
Q + +I GT Y+ PE + ++T KSD+YSFGVVL+E++TG + + +
Sbjct: 181 A---QXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAV----DEHR 232
Query: 289 ENVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEVS 348
E L + + D+ M + A ++A +CL KRP +++V
Sbjct: 233 EPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQ 292
Query: 349 MELNGIRGS 357
L + S
Sbjct: 293 QLLQEMTAS 301
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 137 bits (345), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 151/297 (50%), Gaps = 41/297 (13%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGRL-EDGRIIAVKKSKLAVDDEE---LYKLEEFINEIFI 124
A N + +G+GG G V+KGRL +D ++A+K L + E + K +EF E+FI
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIE 184
+S +NH N+VKL G L P +V EF+P G LY L D+ +P+ W ++ R+ ++
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDK----AHPIKWSVKLRLMLD 130
Query: 185 VAGALAYLHSGASSPIYHRDIKSTNIL---LDERYR--AKVADFGTSKFIAMDQTHVTTK 239
+A + Y+ + + PI HRD++S NI LDE AKVADFGTS+ H +
Sbjct: 131 IALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSG 185
Query: 240 IQGTFGYLDPEY--HQSSQLTDKSDVYSFGVVLVELLTGKKPI--FSTGNTSQENVSLAA 295
+ G F ++ PE + T+K+D YSF ++L +LTG+ P +S G
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK-------- 237
Query: 296 YFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEVSMELN 352
F++ +R+ L + + N+ E C + KKRP + EL+
Sbjct: 238 -FINMIREEGLRPTIPEDCPP--------RLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 150/297 (50%), Gaps = 41/297 (13%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGRL-EDGRIIAVKKSKLAVDDEE---LYKLEEFINEIFI 124
A N + +G+GG G V+KGRL +D ++A+K L + E + K +EF E+FI
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIE 184
+S +NH N+VKL G L P +V EF+P G LY L D+ +P+ W ++ R+ ++
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDK----AHPIKWSVKLRLMLD 130
Query: 185 VAGALAYLHSGASSPIYHRDIKSTNIL---LDERYR--AKVADFGTSKFIAMDQTHVTTK 239
+A + Y+ + + PI HRD++S NI LDE AKVADFG S+ H +
Sbjct: 131 IALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSG 185
Query: 240 IQGTFGYLDPEY--HQSSQLTDKSDVYSFGVVLVELLTGKKPI--FSTGNTSQENVSLAA 295
+ G F ++ PE + T+K+D YSF ++L +LTG+ P +S G
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK-------- 237
Query: 296 YFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEVSMELN 352
F++ +R+ L + + N+ E C + KKRP + EL+
Sbjct: 238 -FINMIREEGLRPTIPEDCPP--------RLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 149/297 (50%), Gaps = 41/297 (13%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGRL-EDGRIIAVKKSKLAVDDEE---LYKLEEFINEIFI 124
A N + +G+GG G V+KGRL +D ++A+K L + E + K +EF E+FI
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIE 184
+S +NH N+VKL G L P +V EF+P G LY L D+ +P+ W ++ R+ ++
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDK----AHPIKWSVKLRLMLD 130
Query: 185 VAGALAYLHSGASSPIYHRDIKSTNIL---LDERYR--AKVADFGTSKFIAMDQTHVTTK 239
+A + Y+ + + PI HRD++S NI LDE AKVADF S+ H +
Sbjct: 131 IALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSG 185
Query: 240 IQGTFGYLDPEY--HQSSQLTDKSDVYSFGVVLVELLTGKKPI--FSTGNTSQENVSLAA 295
+ G F ++ PE + T+K+D YSF ++L +LTG+ P +S G
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK-------- 237
Query: 296 YFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEVSMELN 352
F++ +R+ L + + N+ E C + KKRP + EL+
Sbjct: 238 -FINMIREEGLRPTIPEDCPP--------RLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 125/225 (55%), Gaps = 18/225 (8%)
Query: 61 FSSKELDKATNHFNVNRI------LGQGGQGTVYKGRLEDGRIIAVKKSKLAVD--DEEL 112
FS EL TN+F+ I G+GG G VYKG + + +AVKK VD EEL
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 113 YKLEEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYP 172
++F EI + ++ H N+V+LLG + + LVY + PNG+L L + P
Sbjct: 65 K--QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL--SCLDGTPP 120
Query: 173 LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-M 231
L+W R ++A A + +LH HRDIKS NILLDE + AK++DFG ++
Sbjct: 121 LSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 177
Query: 232 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTG 276
Q ++I GT Y PE + ++T KSD+YSFGVVL+E++TG
Sbjct: 178 AQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITG 221
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 125/234 (53%), Gaps = 12/234 (5%)
Query: 65 ELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFI 124
++D N+ +G G GTV++ G +AVK L D ++ EF+ E+ I
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKI--LMEQDFHAERVNEFLREVAI 87
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIE 184
+ ++ H N+V +G + +V E++ G+LY+ LH E+ L R +A +
Sbjct: 88 MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ--LDERRRLSMAYD 145
Query: 185 VAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK-IQGT 243
VA + YLH+ + PI HR++KS N+L+D++Y KV DFG S+ A T +++K GT
Sbjct: 146 VAKGMNYLHN-RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA--STFLSSKSAAGT 202
Query: 244 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYF 297
++ PE + +KSDVYSFGV+L EL T ++P GN + V A F
Sbjct: 203 PEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP---WGNLNPAQVVAAVGF 253
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 121/233 (51%), Gaps = 10/233 (4%)
Query: 65 ELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFI 124
++D N+ +G G GTV++ G +AVK L D ++ EF+ E+ I
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKI--LMEQDFHAERVNEFLREVAI 87
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIE 184
+ ++ H N+V +G + +V E++ G+LY+ LH E+ L R +A +
Sbjct: 88 MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ--LDERRRLSMAYD 145
Query: 185 VAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 244
VA + YLH+ + PI HRD+KS N+L+D++Y KV DFG S+ A + GT
Sbjct: 146 VAKGMNYLHN-RNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKA-SXFLXSKXAAGTP 203
Query: 245 GYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYF 297
++ PE + +KSDVYSFGV+L EL T ++P GN + V A F
Sbjct: 204 EWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP---WGNLNPAQVVAAVGF 253
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 135/274 (49%), Gaps = 32/274 (11%)
Query: 75 VNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVV 134
V ++G+G G V K + + +A+K+ ++ E K FI E+ LS++NH N+V
Sbjct: 13 VEEVVGRGAFGVVCKAKWR-AKDVAIKQ----IESESERK--AFIVELRQLSRVNHPNIV 65
Query: 135 KLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHS 194
KL G CL LV E+ G+LY LH Y M + ++ + +AYLHS
Sbjct: 66 KLYGACLNPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW--CLQCSQGVAYLHS 121
Query: 195 GASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
+ HRD+K N+LL K+ DFGT+ I QTH+T +G+ ++ PE +
Sbjct: 122 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN-KGSAAWMAPEVFE 177
Query: 254 SSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDDQ 313
S ++K DV+S+G++L E++T +KP G + + + VH+ + L
Sbjct: 178 GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM----WAVHNGTRPPLI------ 227
Query: 314 VMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
KN +L RC + +RP+MEE+
Sbjct: 228 ------KNLPKPIESLMTRCWSKDPSQRPSMEEI 255
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 135/274 (49%), Gaps = 32/274 (11%)
Query: 75 VNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVV 134
V ++G+G G V K + + +A+K+ ++ E K FI E+ LS++NH N+V
Sbjct: 12 VEEVVGRGAFGVVCKAKWR-AKDVAIKQ----IESESERK--AFIVELRQLSRVNHPNIV 64
Query: 135 KLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHS 194
KL G CL LV E+ G+LY LH Y M + ++ + +AYLHS
Sbjct: 65 KLYGACLNPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW--CLQCSQGVAYLHS 120
Query: 195 GASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
+ HRD+K N+LL K+ DFGT+ I QTH+T +G+ ++ PE +
Sbjct: 121 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN-KGSAAWMAPEVFE 176
Query: 254 SSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDDQ 313
S ++K DV+S+G++L E++T +KP G + + + VH+ + L
Sbjct: 177 GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM----WAVHNGTRPPLI------ 226
Query: 314 VMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
KN +L RC + +RP+MEE+
Sbjct: 227 ------KNLPKPIESLMTRCWSKDPSQRPSMEEI 254
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 138/300 (46%), Gaps = 41/300 (13%)
Query: 65 ELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFI 124
E+D A + I+G GG G VY+ G +AVK ++ D++ +E E +
Sbjct: 3 EIDFA--ELTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKL 59
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIE 184
+ + H N++ L G CL+ LV EF G L + L + + + W A++
Sbjct: 60 FAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQ 113
Query: 185 VAGALAYLHSGASSPIYHRDIKSTNILLDERYR--------AKVADFGTSKFIAMDQTHV 236
+A + YLH A PI HRD+KS+NIL+ ++ K+ DFG ++ + H
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHR 168
Query: 237 TTKIQ--GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
TTK+ G + ++ PE ++S + SDV+S+GV+L ELLTG+ P +
Sbjct: 169 TTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA------- 221
Query: 295 AYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEVSMELNGI 354
+ + N+L + + FA L E C + + RP+ + +L I
Sbjct: 222 --VAYGVAMNKLALPIPSTCPE--------PFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 119/230 (51%), Gaps = 20/230 (8%)
Query: 72 HFNVNRILGQGGQGTVYKGRL--EDGRII--AVKKSKLAVDDEELYKLEEFINEIFILSQ 127
HFN ++G+G G VY G L DG+ I AVK D E+ +F+ E I+
Sbjct: 31 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 85
Query: 128 INHRNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+H NV+ LLG CL +E PL+V ++ +G L + +NE + T + ++VA
Sbjct: 86 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVKDLIGFGLQVA 141
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGT 243
+ +L AS HRD+ + N +LDE++ KVADFG ++ + D H T +
Sbjct: 142 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 198
Query: 244 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 293
++ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 199 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 248
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 119/230 (51%), Gaps = 20/230 (8%)
Query: 72 HFNVNRILGQGGQGTVYKGRL--EDGRII--AVKKSKLAVDDEELYKLEEFINEIFILSQ 127
HFN ++G+G G VY G L DG+ I AVK D E+ +F+ E I+
Sbjct: 38 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 92
Query: 128 INHRNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+H NV+ LLG CL +E PL+V ++ +G L + +NE + T + ++VA
Sbjct: 93 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVKDLIGFGLQVA 148
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGT 243
+ +L AS HRD+ + N +LDE++ KVADFG ++ + D H T +
Sbjct: 149 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 205
Query: 244 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 293
++ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 206 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 255
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 117/223 (52%), Gaps = 20/223 (8%)
Query: 72 HFNVNRILGQGGQGTVYKGRL--EDGRII--AVKKSKLAVDDEELYKLEEFINEIFILSQ 127
HFN ++G+G G VY G L DG+ I AVK D E+ +F+ E I+
Sbjct: 34 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 88
Query: 128 INHRNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+H NV+ LLG CL +E PL+V ++ +G L + +NE + T + ++VA
Sbjct: 89 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVKDLIGFGLQVA 144
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGT 243
+ +L AS HRD+ + N +LDE++ KVADFG ++ + D H T +
Sbjct: 145 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLP 201
Query: 244 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 286
++ E Q+ + T KSDV+SFGV+L EL+T P + NT
Sbjct: 202 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 244
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 117/223 (52%), Gaps = 20/223 (8%)
Query: 72 HFNVNRILGQGGQGTVYKGRL--EDGRII--AVKKSKLAVDDEELYKLEEFINEIFILSQ 127
HFN ++G+G G VY G L DG+ I AVK D E+ +F+ E I+
Sbjct: 34 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 88
Query: 128 INHRNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+H NV+ LLG CL +E PL+V ++ +G L + +NE + T + ++VA
Sbjct: 89 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVKDLIGFGLQVA 144
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGT 243
+ +L AS HRD+ + N +LDE++ KVADFG ++ + D H T +
Sbjct: 145 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 201
Query: 244 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 286
++ E Q+ + T KSDV+SFGV+L EL+T P + NT
Sbjct: 202 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 244
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 119/230 (51%), Gaps = 20/230 (8%)
Query: 72 HFNVNRILGQGGQGTVYKGRL--EDGRII--AVKKSKLAVDDEELYKLEEFINEIFILSQ 127
HFN ++G+G G VY G L DG+ I AVK D E+ +F+ E I+
Sbjct: 33 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 87
Query: 128 INHRNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+H NV+ LLG CL +E PL+V ++ +G L + +NE + T + ++VA
Sbjct: 88 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVKDLIGFGLQVA 143
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGT 243
+ +L AS HRD+ + N +LDE++ KVADFG ++ + D H T +
Sbjct: 144 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 200
Query: 244 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 293
++ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 201 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 250
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 119/230 (51%), Gaps = 20/230 (8%)
Query: 72 HFNVNRILGQGGQGTVYKGRL--EDGRII--AVKKSKLAVDDEELYKLEEFINEIFILSQ 127
HFN ++G+G G VY G L DG+ I AVK D E+ +F+ E I+
Sbjct: 33 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 87
Query: 128 INHRNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+H NV+ LLG CL +E PL+V ++ +G L + +NE + T + ++VA
Sbjct: 88 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVKDLIGFGLQVA 143
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGT 243
+ +L AS HRD+ + N +LDE++ KVADFG ++ + D H T +
Sbjct: 144 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 200
Query: 244 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 293
++ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 201 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 250
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 117/223 (52%), Gaps = 20/223 (8%)
Query: 72 HFNVNRILGQGGQGTVYKGRL--EDGRII--AVKKSKLAVDDEELYKLEEFINEIFILSQ 127
HFN ++G+G G VY G L DG+ I AVK D E+ +F+ E I+
Sbjct: 92 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 146
Query: 128 INHRNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+H NV+ LLG CL +E PL+V ++ +G L + +NE + T + ++VA
Sbjct: 147 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVKDLIGFGLQVA 202
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGT 243
+ +L AS HRD+ + N +LDE++ KVADFG ++ + D H T +
Sbjct: 203 KGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 259
Query: 244 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 286
++ E Q+ + T KSDV+SFGV+L EL+T P + NT
Sbjct: 260 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 302
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 116/223 (52%), Gaps = 20/223 (8%)
Query: 72 HFNVNRILGQGGQGTVYKGRL--EDGRII--AVKKSKLAVDDEELYKLEEFINEIFILSQ 127
HFN ++G+G G VY G L DG+ I AVK D E+ +F+ E I+
Sbjct: 32 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 86
Query: 128 INHRNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+H NV+ LLG CL +E PL+V ++ +G L + +NE + T + ++VA
Sbjct: 87 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVKDLIGFGLQVA 142
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGT 243
+ YL AS HRD+ + N +LDE++ KVADFG ++ + H T +
Sbjct: 143 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLP 199
Query: 244 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 286
++ E Q+ + T KSDV+SFGV+L EL+T P + NT
Sbjct: 200 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 242
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 119/230 (51%), Gaps = 20/230 (8%)
Query: 72 HFNVNRILGQGGQGTVYKGRL--EDGRII--AVKKSKLAVDDEELYKLEEFINEIFILSQ 127
HFN ++G+G G VY G L DG+ I AVK D E+ +F+ E I+
Sbjct: 30 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 84
Query: 128 INHRNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+H NV+ LLG CL +E PL+V ++ +G L + +NE + T + ++VA
Sbjct: 85 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVKDLIGFGLQVA 140
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGT 243
+ YL AS HRD+ + N +LDE++ KVADFG ++ + + H T +
Sbjct: 141 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 197
Query: 244 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 293
++ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 198 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 247
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 119/230 (51%), Gaps = 20/230 (8%)
Query: 72 HFNVNRILGQGGQGTVYKGRL--EDGRII--AVKKSKLAVDDEELYKLEEFINEIFILSQ 127
HFN ++G+G G VY G L DG+ I AVK D E+ +F+ E I+
Sbjct: 25 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 79
Query: 128 INHRNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+H NV+ LLG CL +E PL+V ++ +G L + +NE + T + ++VA
Sbjct: 80 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVKDLIGFGLQVA 135
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGT 243
+ YL AS HRD+ + N +LDE++ KVADFG ++ + + H T +
Sbjct: 136 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 192
Query: 244 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 293
++ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 193 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 242
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 117/223 (52%), Gaps = 20/223 (8%)
Query: 72 HFNVNRILGQGGQGTVYKGRL--EDGRII--AVKKSKLAVDDEELYKLEEFINEIFILSQ 127
HFN ++G+G G VY G L DG+ I AVK D E+ +F+ E I+
Sbjct: 33 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 87
Query: 128 INHRNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+H NV+ LLG CL +E PL+V ++ +G L + +NE + T + ++VA
Sbjct: 88 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVKDLIGFGLQVA 143
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGT 243
+ YL AS HRD+ + N +LDE++ KVADFG ++ + + H T +
Sbjct: 144 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 200
Query: 244 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 286
++ E Q+ + T KSDV+SFGV+L EL+T P + NT
Sbjct: 201 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 243
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 117/223 (52%), Gaps = 20/223 (8%)
Query: 72 HFNVNRILGQGGQGTVYKGRL--EDGRII--AVKKSKLAVDDEELYKLEEFINEIFILSQ 127
HFN ++G+G G VY G L DG+ I AVK D E+ +F+ E I+
Sbjct: 52 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 106
Query: 128 INHRNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+H NV+ LLG CL +E PL+V ++ +G L + +NE + T + ++VA
Sbjct: 107 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVKDLIGFGLQVA 162
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGT 243
+ YL AS HRD+ + N +LDE++ KVADFG ++ + + H T +
Sbjct: 163 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 219
Query: 244 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 286
++ E Q+ + T KSDV+SFGV+L EL+T P + NT
Sbjct: 220 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 262
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 119/230 (51%), Gaps = 20/230 (8%)
Query: 72 HFNVNRILGQGGQGTVYKGRL--EDGRII--AVKKSKLAVDDEELYKLEEFINEIFILSQ 127
HFN ++G+G G VY G L DG+ I AVK D E+ +F+ E I+
Sbjct: 28 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 82
Query: 128 INHRNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+H NV+ LLG CL +E PL+V ++ +G L + +NE + T + ++VA
Sbjct: 83 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVKDLIGFGLQVA 138
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGT 243
+ YL AS HRD+ + N +LDE++ KVADFG ++ + + H T +
Sbjct: 139 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 195
Query: 244 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 293
++ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 196 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 245
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 117/223 (52%), Gaps = 20/223 (8%)
Query: 72 HFNVNRILGQGGQGTVYKGRL--EDGRII--AVKKSKLAVDDEELYKLEEFINEIFILSQ 127
HFN ++G+G G VY G L DG+ I AVK D E+ +F+ E I+
Sbjct: 51 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 105
Query: 128 INHRNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+H NV+ LLG CL +E PL+V ++ +G L + +NE + T + ++VA
Sbjct: 106 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVKDLIGFGLQVA 161
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGT 243
+ YL AS HRD+ + N +LDE++ KVADFG ++ + + H T +
Sbjct: 162 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 218
Query: 244 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 286
++ E Q+ + T KSDV+SFGV+L EL+T P + NT
Sbjct: 219 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 261
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 119/230 (51%), Gaps = 20/230 (8%)
Query: 72 HFNVNRILGQGGQGTVYKGRL--EDGRII--AVKKSKLAVDDEELYKLEEFINEIFILSQ 127
HFN ++G+G G VY G L DG+ I AVK D E+ +F+ E I+
Sbjct: 32 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 86
Query: 128 INHRNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+H NV+ LLG CL +E PL+V ++ +G L + +NE + T + ++VA
Sbjct: 87 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVKDLIGFGLQVA 142
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGT 243
+ YL AS HRD+ + N +LDE++ KVADFG ++ + + H T +
Sbjct: 143 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 199
Query: 244 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 293
++ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 200 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 249
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 119/230 (51%), Gaps = 20/230 (8%)
Query: 72 HFNVNRILGQGGQGTVYKGRL--EDGRII--AVKKSKLAVDDEELYKLEEFINEIFILSQ 127
HFN ++G+G G VY G L DG+ I AVK D E+ +F+ E I+
Sbjct: 31 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 85
Query: 128 INHRNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+H NV+ LLG CL +E PL+V ++ +G L + +NE + T + ++VA
Sbjct: 86 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVKDLIGFGLQVA 141
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGT 243
+ YL AS HRD+ + N +LDE++ KVADFG ++ + + H T +
Sbjct: 142 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 198
Query: 244 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 293
++ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 199 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 248
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 119/230 (51%), Gaps = 20/230 (8%)
Query: 72 HFNVNRILGQGGQGTVYKGRL--EDGRII--AVKKSKLAVDDEELYKLEEFINEIFILSQ 127
HFN ++G+G G VY G L DG+ I AVK D E+ +F+ E I+
Sbjct: 33 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEV---SQFLTEGIIMKD 87
Query: 128 INHRNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+H NV+ LLG CL +E PL+V ++ +G L + +NE + T + ++VA
Sbjct: 88 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFI----RNETHNPTVKDLIGFGLQVA 143
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ---THVTTKIQGT 243
+ YL AS HRD+ + N +LDE++ KVADFG ++ + + H T +
Sbjct: 144 KGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 200
Query: 244 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 293
++ E Q+ + T KSDV+SFGV+L EL+T P + NT V L
Sbjct: 201 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 250
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 125/285 (43%), Gaps = 30/285 (10%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
SK+ A F + R LG+G G VY R + + I K E+ + E+
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 123 FILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVA 182
I S + H N+++L G + L+ E+ P GT+Y+ L + +E +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 117
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
E+A AL+Y HS + HRDIK N+LL K+ADFG S + + TT + G
Sbjct: 118 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCG 171
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMR 302
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 220
Query: 303 KNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+R+ D V + + +L R L N +RP + EV
Sbjct: 221 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 257
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 123/285 (43%), Gaps = 30/285 (10%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
SK+ A F + R LG+G G VY R + + I K E+ + E+
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 123 FILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVA 182
I S + H N+++L G + L+ E+ P GT+Y+ L + +E +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 119
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
E+A AL+Y HS + HRDIK N+LL K+ADFG S + T + G
Sbjct: 120 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCG 173
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMR 302
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 222
Query: 303 KNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+R+ D V + + +L R L N +RP + EV
Sbjct: 223 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 259
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 123/285 (43%), Gaps = 30/285 (10%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
SK+ A F + R LG+G G VY R + + I K E+ + E+
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 123 FILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVA 182
I S + H N+++L G + L+ E+ P GT+Y+ L + +E +
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 115
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
E+A AL+Y HS + HRDIK N+LL K+ADFG S + T + G
Sbjct: 116 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCG 169
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMR 302
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 218
Query: 303 KNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+R+ D V + + +L R L N +RP + EV
Sbjct: 219 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 255
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 114/231 (49%), Gaps = 16/231 (6%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINE 121
SS + + V + +G G GTVYKG+ +AVK L V +L+ F NE
Sbjct: 3 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKM--LNVTAPTPQQLQAFKNE 58
Query: 122 IFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRV 181
+ +L + H N++ +G + + +V ++ +LY HLH E + +
Sbjct: 59 VGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLH----ASETKFEMKKLIDI 113
Query: 182 AIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQTHVTTKI 240
A + A + YLH+ + I HRD+KS NI L E K+ DFG + + +H ++
Sbjct: 114 ARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQL 170
Query: 241 QGTFGYLDPE---YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 288
G+ ++ PE S+ + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 171 SGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 221
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 125/285 (43%), Gaps = 30/285 (10%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
SK+ A F + R LG+G G VY R + + I K E+ + E+
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 123 FILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVA 182
I S + H N+++L G + L+ E+ P GT+Y+ L + +E +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 119
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
E+A AL+Y HS + HRDIK N+LL K+ADFG S + + TT + G
Sbjct: 120 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCG 173
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMR 302
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 222
Query: 303 KNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+R+ D V + + +L R L N +RP + EV
Sbjct: 223 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 259
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 125/285 (43%), Gaps = 30/285 (10%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
SK+ A F + R LG+G G VY R + + I K E+ + E+
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 123 FILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVA 182
I S + H N+++L G + L+ E+ P GT+Y+ L + +E +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 117
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
E+A AL+Y HS + HRDIK N+LL K+ADFG S + + TT + G
Sbjct: 118 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCG 171
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMR 302
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 220
Query: 303 KNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+R+ D V + + +L R L N +RP + EV
Sbjct: 221 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 257
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 125/285 (43%), Gaps = 30/285 (10%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
SK+ A F + R LG+G G VY R + + I K E+ + E+
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 123 FILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVA 182
I S + H N+++L G + L+ E+ P GT+Y+ L + +E +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 119
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
E+A AL+Y HS + HRDIK N+LL K+ADFG S + + TT + G
Sbjct: 120 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCG 173
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMR 302
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 174 TLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 222
Query: 303 KNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+R+ D V + + +L R L N +RP + EV
Sbjct: 223 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPXLREV 259
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 122/284 (42%), Gaps = 30/284 (10%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIF 123
K+ A F + R LG+G G VY R + + I K E+ + E+
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 124 ILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAI 183
I S + H N+++L G + L+ E+ P GT+Y+ L + +E +
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYIT 116
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 243
E+A AL+Y HS + HRDIK N+LL K+ADFG S + T + GT
Sbjct: 117 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSGT 170
Query: 244 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRK 303
YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RI 219
Query: 304 NRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+R+ D V + + +L R L N +RP + EV
Sbjct: 220 SRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 255
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 114/231 (49%), Gaps = 16/231 (6%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINE 121
SS + + V + +G G GTVYKG+ +AVK L V +L+ F NE
Sbjct: 15 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKM--LNVTAPTPQQLQAFKNE 70
Query: 122 IFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRV 181
+ +L + H N++ +G + + +V ++ +LY HLH E + +
Sbjct: 71 VGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLH----ASETKFEMKKLIDI 125
Query: 182 AIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKI 240
A + A + YLH+ + I HRD+KS NI L E K+ DFG ++ +H ++
Sbjct: 126 ARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQL 182
Query: 241 QGTFGYLDPE---YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 288
G+ ++ PE S+ + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 183 SGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 233
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 121/279 (43%), Gaps = 30/279 (10%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
A F + R LG+G G VY R + + I K E+ + E+ I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGA 188
H N+++L G + L+ E+ P GT+Y+ L + +E + E+A A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYITELANA 120
Query: 189 LAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 248
L+Y HS + HRDIK N+LL K+ADFG S + T++ GT YL
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTELCGTLDYLP 174
Query: 249 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYH 308
PE + +K D++S GV+ E L GK P NT QE R +R+
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RISRVEF 223
Query: 309 ILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
D V + + +L R L N +RP + EV
Sbjct: 224 TFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 254
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 125/285 (43%), Gaps = 30/285 (10%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
SK+ A F + R LG+G G VY R + + I K E+ + E+
Sbjct: 17 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 76
Query: 123 FILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVA 182
I S + H N+++L G + L+ E+ P GT+Y+ L + +E +
Sbjct: 77 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 131
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
E+A AL+Y HS + HRDIK N+LL K+ADFG S + + TT + G
Sbjct: 132 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCG 185
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMR 302
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 186 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 234
Query: 303 KNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+R+ D V + + +L R L N +RP + EV
Sbjct: 235 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 271
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 120/279 (43%), Gaps = 30/279 (10%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
A F + R LG+G G VY R + + I K E+ + E+ I S +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGA 188
H N+++L G + L+ E+ P GT+Y+ L + +E + E+A A
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYITELANA 119
Query: 189 LAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 248
L+Y HS + HRDIK N+LL K+ADFG S + T + GT YL
Sbjct: 120 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLP 173
Query: 249 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYH 308
PE + +K D++S GV+ E L GK P NT QE R +R+
Sbjct: 174 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RISRVEF 222
Query: 309 ILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
D V + + +L R L N +RP + EV
Sbjct: 223 TFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 253
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 124/285 (43%), Gaps = 30/285 (10%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
SK+ A F + R LG+G G VY R + + I K E+ + E+
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 123 FILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVA 182
I S + H N+++L G + L+ E+ P G +Y+ L + +E +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE-----QRTATYI 119
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
E+A AL+Y HS + HRDIK N+LL K+ADFG S + + TT + G
Sbjct: 120 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCG 173
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMR 302
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 222
Query: 303 KNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+R+ D V + + +L R L N +RP + EV
Sbjct: 223 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 259
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 125/285 (43%), Gaps = 30/285 (10%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
SK+ A F + R LG+G G VY R + + I K E+ + E+
Sbjct: 26 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 85
Query: 123 FILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVA 182
I S + H N+++L G + L+ E+ P GT+Y+ L + +E +
Sbjct: 86 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 140
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
E+A AL+Y HS + HRDIK N+LL K+ADFG S + + TT + G
Sbjct: 141 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCG 194
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMR 302
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 195 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 243
Query: 303 KNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+R+ D V + + +L R L N +RP + EV
Sbjct: 244 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 280
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 120/279 (43%), Gaps = 30/279 (10%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
A F + R LG+G G VY R + + I K E+ + E+ I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGA 188
H N+++L G + L+ E+ P GT+Y+ L + +E + E+A A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYITELANA 120
Query: 189 LAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 248
L+Y HS + HRDIK N+LL K+ADFG S + T + GT YL
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTXLCGTLDYLP 174
Query: 249 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYH 308
PE + +K D++S GV+ E L GK P NT QE R +R+
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RISRVEF 223
Query: 309 ILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
D V + + +L R L N +RP + EV
Sbjct: 224 TFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 254
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 120/279 (43%), Gaps = 30/279 (10%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
A F + R LG+G G VY R + + I K E+ + E+ I S +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGA 188
H N+++L G + L+ E+ P GT+Y+ L + +E + E+A A
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYITELANA 124
Query: 189 LAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 248
L+Y HS + HRDIK N+LL K+ADFG S + T + GT YL
Sbjct: 125 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLP 178
Query: 249 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYH 308
PE + +K D++S GV+ E L GK P NT QE R +R+
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RISRVEF 227
Query: 309 ILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
D V + + +L R L N +RP + EV
Sbjct: 228 TFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 258
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 122/285 (42%), Gaps = 30/285 (10%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
SK+ A F + R LG+G G VY R + + I K E+ + E+
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 123 FILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVA 182
I S + H N+++L G + L+ E+ P GT+Y+ L + +E +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 117
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
E+A AL+Y HS + HRDIK N+LL K+ADFG S + + G
Sbjct: 118 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCG 171
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMR 302
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 220
Query: 303 KNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+R+ D V + + +L R L N +RP + EV
Sbjct: 221 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 257
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 120/279 (43%), Gaps = 30/279 (10%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
A F + R LG+G G VY R + + I K E+ + E+ I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGA 188
H N+++L G + L+ E+ P GT+Y+ L + +E + E+A A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYITELANA 120
Query: 189 LAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 248
L+Y HS + HRDIK N+LL K+ADFG S + T + GT YL
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLP 174
Query: 249 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYH 308
PE + +K D++S GV+ E L GK P NT QE R +R+
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RISRVEF 223
Query: 309 ILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
D V + + +L R L N +RP + EV
Sbjct: 224 TFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 254
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 123/285 (43%), Gaps = 30/285 (10%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
SK+ A F + R LG+G G VY R + + I K E+ + E+
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 123 FILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVA 182
I S + H N+++L G + L+ E+ P GT+Y+ L + +E +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 117
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
E+A AL+Y HS + HRDIK N+LL K+A+FG S + T + G
Sbjct: 118 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCG 171
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMR 302
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 220
Query: 303 KNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+R+ D V + + +L R L N +RP + EV
Sbjct: 221 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 257
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 122/279 (43%), Gaps = 30/279 (10%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
A F + R LG+G G VY R + + I K E+ + E+ I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGA 188
H N+++L G + L+ E+ P GT+Y+ L + +E + E+A A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYITELANA 120
Query: 189 LAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 248
L+Y HS + HRDIK N+LL K+ADFG S + + TT + GT YL
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT-LCGTLDYLP 174
Query: 249 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYH 308
PE + +K D++S GV+ E L GK P NT QE R +R+
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RISRVEF 223
Query: 309 ILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
D V + + +L R L N +RP + EV
Sbjct: 224 TFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 254
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 122/284 (42%), Gaps = 30/284 (10%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIF 123
K+ A F + R LG+G G VY R + + I K E+ + E+
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 124 ILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAI 183
I S + H N+++L G + L+ E+ P GT+Y+ L + +E +
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYIT 115
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 243
E+A AL+Y HS + HRDIK N+LL K+ADFG S + T + GT
Sbjct: 116 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGT 169
Query: 244 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRK 303
YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RI 218
Query: 304 NRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+R+ D V + + +L R L N +RP + EV
Sbjct: 219 SRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 254
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 125/285 (43%), Gaps = 30/285 (10%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
SK+ A F + R LG+G G VY R + + I K E+ + E+
Sbjct: 2 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 61
Query: 123 FILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVA 182
I S + H N+++L G + L+ E+ P GT+Y+ L + +E +
Sbjct: 62 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 116
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
E+A AL+Y HS + HRDIK N+LL K+A+FG S + + TT + G
Sbjct: 117 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTT-LCG 170
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMR 302
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 219
Query: 303 KNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+R+ D V + + +L R L N +RP + EV
Sbjct: 220 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 256
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 122/285 (42%), Gaps = 30/285 (10%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
SK+ A F + R LG+G G VY R + + I K E+ + E+
Sbjct: 2 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 61
Query: 123 FILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVA 182
I S + H N+++L G + L+ E+ P GT+Y+ L + +E +
Sbjct: 62 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 116
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
E+A AL+Y HS + HRDIK N+LL K+ADFG S + + G
Sbjct: 117 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCG 170
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMR 302
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 219
Query: 303 KNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+R+ D V + + +L R L N +RP + EV
Sbjct: 220 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 256
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 122/285 (42%), Gaps = 30/285 (10%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
SK+ A F + R LG+G G VY R + + I K E+ + E+
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 123 FILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVA 182
I S + H N+++L G + L+ E+ P GT+Y+ L + +E +
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 115
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
E+A AL+Y HS + HRDIK N+LL K+ADFG S + + G
Sbjct: 116 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT---LCG 169
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMR 302
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 218
Query: 303 KNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+R+ D V + + +L R L N +RP + EV
Sbjct: 219 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 255
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 120/279 (43%), Gaps = 30/279 (10%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
A F + R LG+G G VY R + + I K E+ + E+ I S +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGA 188
H N+++L G + L+ E+ P GT+Y+ L + +E + E+A A
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYITELANA 117
Query: 189 LAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 248
L+Y HS + HRDIK N+LL K+ADFG S + T + GT YL
Sbjct: 118 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLP 171
Query: 249 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYH 308
PE + +K D++S GV+ E L GK P NT QE R +R+
Sbjct: 172 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RISRVEF 220
Query: 309 ILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
D V + + +L R L N +RP + EV
Sbjct: 221 TFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 251
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 121/285 (42%), Gaps = 30/285 (10%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
SK+ A F + R LG+G G VY R + + I K E+ + E+
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 123 FILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVA 182
I S + H N+++L G + L+ E+ P G +Y+ L + +E +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE-----QRTATYI 119
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
E+A AL+Y HS + HRDIK N+LL K+ADFG S + + G
Sbjct: 120 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLXG 173
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMR 302
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 222
Query: 303 KNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+R+ D V + + +L R L N +RP + EV
Sbjct: 223 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 259
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
A F + R LG+G G VY R + + I K E+ + E+ I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGA 188
H N+++L G + L+ E+ P GT+Y+ L + +E + E+A A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYITELANA 120
Query: 189 LAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 248
L+Y HS + HRDIK N+LL K+ADFG S + + GT YL
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYLP 174
Query: 249 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYH 308
PE + +K D++S GV+ E L GK P NT QE R +R+
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RISRVEF 223
Query: 309 ILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
D V + + +L R L N +RP + EV
Sbjct: 224 TFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 254
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 30/279 (10%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
A F + R LG+G G VY R ++ + I K E+ + E+ I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGA 188
H N+++L G ++ L+ E+ P GT+Y+ L + +E + E+A A
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYITELANA 120
Query: 189 LAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 248
L+Y HS + HRDIK N+LL K+ADFG S + + GT YL
Sbjct: 121 LSYCHSKK---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYLP 174
Query: 249 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYH 308
PE + +K D++S GV+ E L GK P NT Q+ R +R+
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQDTYK---------RISRVEF 223
Query: 309 ILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
D V + + +L R L N +RP + EV
Sbjct: 224 TFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 254
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 116/241 (48%), Gaps = 32/241 (13%)
Query: 52 GSVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEE 111
GSVID +L +E+ G G G V+ G + +A+K + EE
Sbjct: 1 GSVIDPSELTFVQEI-------------GSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE 47
Query: 112 LYKLEEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEY 171
+FI E ++ +++H +V+L G CLE LV+EF+ +G L +L R Q +
Sbjct: 48 -----DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLF 100
Query: 172 PLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAM 231
E + ++V +AYL + + HRD+ + N L+ E KV+DFG ++F+
Sbjct: 101 AA--ETLLGMCLDVCEGMAYLEEAS---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 155
Query: 232 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENV 291
DQ +T + + PE S+ + KSDV+SFGV++ E +FS G EN
Sbjct: 156 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE-------VFSEGKIPYENR 208
Query: 292 S 292
S
Sbjct: 209 S 209
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
A F + R LG+G G VY R + + I K E+ + E+ I S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGA 188
H N+++L G + L+ E+ P GT+Y+ L + +E + E+A A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYITELANA 123
Query: 189 LAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 248
L+Y HS + HRDIK N+LL K+ADFG S + + GT YL
Sbjct: 124 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYLP 177
Query: 249 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYH 308
PE + +K D++S GV+ E L GK P NT QE R +R+
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RISRVEF 226
Query: 309 ILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
D V + + +L R L N +RP + EV
Sbjct: 227 TFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 257
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
A F + R LG+G G VY R + + I K E+ + E+ I S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGA 188
H N+++L G + L+ E+ P GT+Y+ L + +E + E+A A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYITELANA 120
Query: 189 LAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 248
L+Y HS + HRDIK N+LL K+ADFG S + + GT YL
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYLP 174
Query: 249 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYH 308
PE + +K D++S GV+ E L GK P NT QE R +R+
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RISRVEF 223
Query: 309 ILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
D V + + +L R L N +RP + EV
Sbjct: 224 TFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 254
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 111/223 (49%), Gaps = 20/223 (8%)
Query: 72 HFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHR 131
V + +G G GTVYKG+ +AVK L V +L+ F NE+ +L + H
Sbjct: 25 QITVGQRIGSGSFGTVYKGKWHGD--VAVKM--LNVTAPTPQQLQAFKNEVGVLRKTRHV 80
Query: 132 NVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMR--FRVAIEVAGAL 189
N++ +G + +V ++ +LY HLH +EM+ +A + A +
Sbjct: 81 NILLFMGYSTAPQL-AIVTQWCEGSSLYHHLHASETK------FEMKKLIDIARQTARGM 133
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTFGYLD 248
YLH+ + I HRD+KS NI L E K+ DFG ++ +H ++ G+ ++
Sbjct: 134 DYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 190
Query: 249 PE---YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 288
PE S+ + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 191 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 233
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 114/237 (48%), Gaps = 28/237 (11%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINE 121
SS + + V + +G G GTVYKG+ +AVK L V +L+ F NE
Sbjct: 26 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKM--LNVTAPTPQQLQAFKNE 81
Query: 122 IFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR- 180
+ +L + H N++ +G + + + V ++ +LY HLH E +F
Sbjct: 82 VGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH----------IIETKFEM 130
Query: 181 -----VAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQT 234
+A + A + YLH+ + I HRD+KS NI L E K+ DFG + + +
Sbjct: 131 IKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS 187
Query: 235 HVTTKIQGTFGYLDPE---YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 288
H ++ G+ ++ PE + + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 188 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 244
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 115/241 (47%), Gaps = 32/241 (13%)
Query: 52 GSVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEE 111
GSVID +L +E+ G G G V+ G + +A+K + EE
Sbjct: 1 GSVIDPSELTFVQEI-------------GSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE 47
Query: 112 LYKLEEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEY 171
+FI E ++ +++H +V+L G CLE LV+EF+ +G L +L R Q +
Sbjct: 48 -----DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLF 100
Query: 172 PLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAM 231
E + ++V +AYL + HRD+ + N L+ E KV+DFG ++F+
Sbjct: 101 AA--ETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 155
Query: 232 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENV 291
DQ +T + + PE S+ + KSDV+SFGV++ E +FS G EN
Sbjct: 156 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE-------VFSEGKIPYENR 208
Query: 292 S 292
S
Sbjct: 209 S 209
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 114/237 (48%), Gaps = 28/237 (11%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINE 121
SS + + V + +G G GTVYKG+ +AVK L V +L+ F NE
Sbjct: 27 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKM--LNVTAPTPQQLQAFKNE 82
Query: 122 IFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR- 180
+ +L + H N++ +G + + + V ++ +LY HLH E +F
Sbjct: 83 VGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH----------IIETKFEM 131
Query: 181 -----VAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQT 234
+A + A + YLH+ + I HRD+KS NI L E K+ DFG + + +
Sbjct: 132 IKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS 188
Query: 235 HVTTKIQGTFGYLDPE---YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 288
H ++ G+ ++ PE + + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 189 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 245
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 122/285 (42%), Gaps = 30/285 (10%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
SK+ A F + R LG+G G VY R + + I K E+ + E+
Sbjct: 26 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 85
Query: 123 FILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVA 182
I S + H N+++L G + L+ E+ P GT+Y+ L + +E +
Sbjct: 86 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYI 140
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
E+A AL+Y HS + HRDIK N+LL K+ADFG S + + G
Sbjct: 141 TELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDDLCG 194
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMR 302
T YL PE + +K D++S GV+ E L GK P NT QE R
Sbjct: 195 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------R 243
Query: 303 KNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+R+ D V + + +L R L N +RP + EV
Sbjct: 244 ISRVEFTFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 280
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 114/237 (48%), Gaps = 28/237 (11%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINE 121
SS + + V + +G G GTVYKG+ +AVK L V +L+ F NE
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKM--LNVTAPTPQQLQAFKNE 59
Query: 122 IFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR- 180
+ +L + H N++ +G + + + V ++ +LY HLH E +F
Sbjct: 60 VGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH----------IIETKFEM 108
Query: 181 -----VAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQT 234
+A + A + YLH+ + I HRD+KS NI L E K+ DFG + + +
Sbjct: 109 IKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS 165
Query: 235 HVTTKIQGTFGYLDPE---YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 288
H ++ G+ ++ PE + + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 166 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 222
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 114/237 (48%), Gaps = 28/237 (11%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINE 121
SS + + V + +G G GTVYKG+ +AVK L V +L+ F NE
Sbjct: 1 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKM--LNVTAPTPQQLQAFKNE 56
Query: 122 IFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR- 180
+ +L + H N++ +G + + + V ++ +LY HLH E +F
Sbjct: 57 VGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH----------IIETKFEM 105
Query: 181 -----VAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQT 234
+A + A + YLH+ + I HRD+KS NI L E K+ DFG + + +
Sbjct: 106 IKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS 162
Query: 235 HVTTKIQGTFGYLDPE---YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 288
H ++ G+ ++ PE + + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 163 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 219
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 119/279 (42%), Gaps = 30/279 (10%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
A F + R LG+G G VY R + + I K E+ + E+ I S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGA 188
H N+++L G + L+ E+ P GT+Y+ L + +E + E+A A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----QRTATYITELANA 123
Query: 189 LAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 248
L+Y HS + HRDIK N+LL K+ADFG S + + GT YL
Sbjct: 124 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDDLCGTLDYLP 177
Query: 249 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYH 308
PE + +K D++S GV+ E L GK P NT QE R +R+
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYK---------RISRVEF 226
Query: 309 ILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
D V + + +L R L N +RP + EV
Sbjct: 227 TFPDFVTEGAR--------DLISRLLKHNPSQRPMLREV 257
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 114/237 (48%), Gaps = 28/237 (11%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINE 121
SS + + V + +G G GTVYKG+ +AVK L V +L+ F NE
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKM--LNVTAPTPQQLQAFKNE 59
Query: 122 IFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR- 180
+ +L + H N++ +G + + + V ++ +LY HLH E +F
Sbjct: 60 VGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH----------IIETKFEM 108
Query: 181 -----VAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQT 234
+A + A + YLH+ + I HRD+KS NI L E K+ DFG + + +
Sbjct: 109 IKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS 165
Query: 235 HVTTKIQGTFGYLDPE---YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 288
H ++ G+ ++ PE + + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 166 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 222
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 106/214 (49%), Gaps = 19/214 (8%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
+G G G V+ G + +A+K + EE +FI E ++ +++H +V+L G
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-----DFIEEAEVMMKLSHPKLVQLYG 67
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASS 198
CLE LV+EF+ +G L +L R Q + E + ++V +AYL
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAA--ETLLGMCLDVCEGMAYLEEAC-- 121
Query: 199 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 258
+ HRD+ + N L+ E KV+DFG ++F+ DQ +T + + PE S+ +
Sbjct: 122 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 180
Query: 259 DKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 292
KSDV+SFGV++ E +FS G EN S
Sbjct: 181 SKSDVWSFGVLMWE-------VFSEGKIPYENRS 207
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 106/214 (49%), Gaps = 19/214 (8%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
+G G G V+ G + +A+K + EE +FI E ++ +++H +V+L G
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-----DFIEEAEVMMKLSHPKLVQLYG 72
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASS 198
CLE LV+EF+ +G L +L R Q + E + ++V +AYL
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAA--ETLLGMCLDVCEGMAYLEEAC-- 126
Query: 199 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 258
+ HRD+ + N L+ E KV+DFG ++F+ DQ +T + + PE S+ +
Sbjct: 127 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 185
Query: 259 DKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 292
KSDV+SFGV++ E +FS G EN S
Sbjct: 186 SKSDVWSFGVLMWE-------VFSEGKIPYENRS 212
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 114/237 (48%), Gaps = 28/237 (11%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINE 121
SS + + V + +G G GTVYKG+ +AVK L V +L+ F NE
Sbjct: 19 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKM--LNVTAPTPQQLQAFKNE 74
Query: 122 IFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR- 180
+ +L + H N++ +G + + + V ++ +LY HLH E +F
Sbjct: 75 VGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH----------IIETKFEM 123
Query: 181 -----VAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQT 234
+A + A + YLH+ + I HRD+KS NI L E K+ DFG ++ +
Sbjct: 124 IKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGS 180
Query: 235 HVTTKIQGTFGYLDPE---YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 288
H ++ G+ ++ PE + + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 181 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 237
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 114/237 (48%), Gaps = 28/237 (11%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINE 121
SS + + V + +G G GTVYKG+ +AVK L V +L+ F NE
Sbjct: 27 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD--VAVKM--LNVTAPTPQQLQAFKNE 82
Query: 122 IFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR- 180
+ +L + H N++ +G + + + V ++ +LY HLH E +F
Sbjct: 83 VGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH----------IIETKFEM 131
Query: 181 -----VAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQT 234
+A + A + YLH+ + I HRD+KS NI L E K+ DFG ++ +
Sbjct: 132 IKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGS 188
Query: 235 HVTTKIQGTFGYLDPE---YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 288
H ++ G+ ++ PE + + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 189 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 245
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 127/282 (45%), Gaps = 31/282 (10%)
Query: 70 TNHFNVNRILGQGGQGTVYKGR-LEDGRIIAVK--KSKLAVDDEELYKLEEFINEIFILS 126
++ + + ILG GG V+ R L D R +AVK ++ LA D + F E +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLR---FRREAQNAA 67
Query: 127 QINHRNVVKLLGCC-LETE---FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVA 182
+NH +V + ET P +V E++ TL +H E P+T + V
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-----TEGPMTPKRAIEVI 122
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKI 240
+ AL + H I HRD+K NIL+ KV DFG ++ IA V T +
Sbjct: 123 ADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAV 179
Query: 241 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH- 299
GT YL PE + + +SDVYS G VL E+LTG+ P TG++ VS+A V
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF--TGDSP---VSVAYQHVRE 234
Query: 300 -----SMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDL 336
S R L LD V+K KN + AE DL
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADL 276
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 106/214 (49%), Gaps = 19/214 (8%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
+G G G V+ G + +A+K K E+ +FI E ++ +++H +V+L G
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSED-----DFIEEAEVMMKLSHPKLVQLYG 89
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASS 198
CLE LV+EF+ +G L +L R Q + E + ++V +AYL
Sbjct: 90 VCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAA--ETLLGMCLDVCEGMAYLEEAC-- 143
Query: 199 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 258
+ HRD+ + N L+ E KV+DFG ++F+ DQ +T + + PE S+ +
Sbjct: 144 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 202
Query: 259 DKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 292
KSDV+SFGV++ E +FS G EN S
Sbjct: 203 SKSDVWSFGVLMWE-------VFSEGKIPYENRS 229
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 127/282 (45%), Gaps = 31/282 (10%)
Query: 70 TNHFNVNRILGQGGQGTVYKGR-LEDGRIIAVK--KSKLAVDDEELYKLEEFINEIFILS 126
++ + + ILG GG V+ R L D R +AVK ++ LA D + F E +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLR---FRREAQNAA 67
Query: 127 QINHRNVVKLLGCC-LETE---FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVA 182
+NH +V + ET P +V E++ TL +H E P+T + V
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-----TEGPMTPKRAIEVI 122
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--TKI 240
+ AL + H I HRD+K NI++ KV DFG ++ IA VT +
Sbjct: 123 ADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 241 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH- 299
GT YL PE + + +SDVYS G VL E+LTG+ P TG++ VS+A V
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF--TGDSP---VSVAYQHVRE 234
Query: 300 -----SMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDL 336
S R L LD V+K KN + AE DL
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADL 276
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 19/214 (8%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
+G G G V+ G + +A+K + EE +FI E ++ +++H +V+L G
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-----DFIEEAEVMMKLSHPKLVQLYG 70
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASS 198
CLE LV EF+ +G L +L R Q + E + ++V +AYL
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYL--RTQRGLFAA--ETLLGMCLDVCEGMAYLEEAC-- 124
Query: 199 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 258
+ HRD+ + N L+ E KV+DFG ++F+ DQ +T + + PE S+ +
Sbjct: 125 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 183
Query: 259 DKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 292
KSDV+SFGV++ E +FS G EN S
Sbjct: 184 SKSDVWSFGVLMWE-------VFSEGKIPYENRS 210
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 107/204 (52%), Gaps = 15/204 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G VY G + + +AVK K E+ ++EEF+ E ++ +I H N+V+LL
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 94
Query: 138 GCC-LETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGA 196
G C LE F +V E++P G L +L + ++ E +T + +A +++ A+ YL
Sbjct: 95 GVCTLEPPF-YIVTEYMPYGNLLDYLRECNREE---VTAVVLLYMATQISSAMEYLE--- 147
Query: 197 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQ 256
HRD+ + N L+ E + KVADFG S+ + D + + PE +
Sbjct: 148 KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNT 207
Query: 257 LTDKSDVYSFGVVLVELLT-GKKP 279
+ KSDV++FGV+L E+ T G P
Sbjct: 208 FSIKSDVWAFGVLLWEIATYGMSP 231
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 110/227 (48%), Gaps = 28/227 (12%)
Query: 72 HFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHR 131
V + +G G GTVYKG+ +AVK L V +L+ F NE+ +L + H
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGD--VAVKM--LNVTAPTPQQLQAFKNEVGVLRKTRHV 64
Query: 132 NVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR------VAIEV 185
N++ +G + + + V ++ +LY HLH E +F +A +
Sbjct: 65 NILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH----------IIETKFEMIKLIDIARQT 113
Query: 186 AGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQTHVTTKIQGTF 244
A + YLH+ + I HRD+KS NI L E K+ DFG + + +H ++ G+
Sbjct: 114 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 170
Query: 245 GYLDPE---YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 288
++ PE + + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 109/227 (48%), Gaps = 28/227 (12%)
Query: 72 HFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHR 131
V + +G G GTVYKG+ +AVK L V +L+ F NE+ +L + H
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGD--VAVKM--LNVTAPTPQQLQAFKNEVGVLRKTRHV 64
Query: 132 NVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR------VAIEV 185
N++ +G + + V ++ +LY HLH E +F +A +
Sbjct: 65 NILLFMGYSTAPQLAI-VTQWCEGSSLYHHLH----------IIETKFEMIKLIDIARQT 113
Query: 186 AGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQTHVTTKIQGTF 244
A + YLH+ + I HRD+KS NI L E K+ DFG + + +H ++ G+
Sbjct: 114 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 170
Query: 245 GYLDPE---YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 288
++ PE + + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 110/227 (48%), Gaps = 28/227 (12%)
Query: 72 HFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHR 131
V + +G G GTVYKG+ +AVK L V +L+ F NE+ +L + H
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGD--VAVKM--LNVTAPTPQQLQAFKNEVGVLRKTRHV 64
Query: 132 NVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR------VAIEV 185
N++ +G + + + V ++ +LY HLH E +F +A +
Sbjct: 65 NILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH----------IIETKFEMIKLIDIARQT 113
Query: 186 AGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFG-TSKFIAMDQTHVTTKIQGTF 244
A + YLH+ + I HRD+KS NI L E K+ DFG ++ +H ++ G+
Sbjct: 114 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI 170
Query: 245 GYLDPE---YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 288
++ PE + + +SDVY+FG+VL EL+TG+ P + N Q
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 126/282 (44%), Gaps = 31/282 (10%)
Query: 70 TNHFNVNRILGQGGQGTVYKGR-LEDGRIIAVK--KSKLAVDDEELYKLEEFINEIFILS 126
++ + + ILG GG V+ R L D R +AVK ++ LA D + F E +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLR---FRREAQNAA 67
Query: 127 QINHRNVVKLLGCC-LETE---FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVA 182
+NH +V + ET P +V E++ TL +H E P+T + V
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-----TEGPMTPKRAIEVI 122
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--TKI 240
+ AL + H I HRD+K NI++ KV DFG ++ IA VT +
Sbjct: 123 ADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 241 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH- 299
GT YL PE + + +SDVYS G VL E+LTG+ P TG++ S+A V
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF--TGDSPD---SVAYQHVRE 234
Query: 300 -----SMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDL 336
S R L LD V+K KN + AE DL
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADL 276
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 118/275 (42%), Gaps = 30/275 (10%)
Query: 73 FNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRN 132
F++ R LG+G G VY R + I K E+ + E+ I S + H N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 133 VVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYL 192
+++L G + L+ E+ P GT+Y+ L + +E + E+A AL+Y
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE-----QRTATYITELANALSYC 128
Query: 193 HSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYH 252
HS + HRDIK N+LL K+ADFG S + T + GT YL PE
Sbjct: 129 HSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMI 182
Query: 253 QSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDD 312
+ +K D++S GV+ E L G P +T QE R +R+ D
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGMPPF--EAHTYQETYR---------RISRVEFTFPD 231
Query: 313 QVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
V + + +L R L N +R T+ EV
Sbjct: 232 FVTEGAR--------DLISRLLKHNASQRLTLAEV 258
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 113/216 (52%), Gaps = 16/216 (7%)
Query: 75 VNRILGQGGQGTVYKGRLEDGR----IIAVKKSKLAVDDEELYKLEEFINEIFILSQINH 130
+NRILG+G G VY+G + + +AVK K D L E+F++E I+ ++H
Sbjct: 28 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCK---KDCTLDNKEKFMSEAVIMKNLDH 84
Query: 131 RNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALA 190
++VKL+G +E E ++ E P G L +L +R++N LT + ++++ A+A
Sbjct: 85 PHIVKLIGI-IEEEPTWIIMELYPYGELGHYL-ERNKNSLKVLTLVL---YSLQICKAMA 139
Query: 191 YLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPE 250
YL S HRDI NIL+ K+ DFG S++I + + + + ++ PE
Sbjct: 140 YLESINCV---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 196
Query: 251 YHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
+ T SDV+ F V + E+L+ GK+P F N
Sbjct: 197 SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN 232
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 114/232 (49%), Gaps = 23/232 (9%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLE--DGRIIAVKKSKLAVDDEELYKLEEFIN 120
+KELD + + R++G G G V GRL+ R +AV L V E + +F+
Sbjct: 37 AKELDASC--IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQR-RDFLC 93
Query: 121 EIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR 180
E I+ Q +H NVV L G + ++V EF+ NG L L +H + F
Sbjct: 94 EASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLR-KHDGQ---------FT 143
Query: 181 VAIEVAGALAYLHSG----ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 236
V I++ G L + +G A HRD+ + NIL++ KV+DFG S+ I D V
Sbjct: 144 V-IQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAV 202
Query: 237 TTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
T G + PE Q + T SDV+S+G+V+ E+++ G++P + N
Sbjct: 203 YTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 254
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 113/216 (52%), Gaps = 16/216 (7%)
Query: 75 VNRILGQGGQGTVYKGRLEDGR----IIAVKKSKLAVDDEELYKLEEFINEIFILSQINH 130
+NRILG+G G VY+G + + +AVK K D L E+F++E I+ ++H
Sbjct: 12 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCK---KDCTLDNKEKFMSEAVIMKNLDH 68
Query: 131 RNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALA 190
++VKL+G +E E ++ E P G L +L +R++N LT + ++++ A+A
Sbjct: 69 PHIVKLIGI-IEEEPTWIIMELYPYGELGHYL-ERNKNSLKVLTLVL---YSLQICKAMA 123
Query: 191 YLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPE 250
YL S HRDI NIL+ K+ DFG S++I + + + + ++ PE
Sbjct: 124 YLESINCV---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 180
Query: 251 YHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
+ T SDV+ F V + E+L+ GK+P F N
Sbjct: 181 SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN 216
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 113/216 (52%), Gaps = 16/216 (7%)
Query: 75 VNRILGQGGQGTVYKGRLEDGR----IIAVKKSKLAVDDEELYKLEEFINEIFILSQINH 130
+NRILG+G G VY+G + + +AVK K D L E+F++E I+ ++H
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCK---KDCTLDNKEKFMSEAVIMKNLDH 72
Query: 131 RNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALA 190
++VKL+G +E E ++ E P G L +L +R++N LT + ++++ A+A
Sbjct: 73 PHIVKLIGI-IEEEPTWIIMELYPYGELGHYL-ERNKNSLKVLTLVL---YSLQICKAMA 127
Query: 191 YLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPE 250
YL S HRDI NIL+ K+ DFG S++I + + + + ++ PE
Sbjct: 128 YLESINCV---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPE 184
Query: 251 YHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
+ T SDV+ F V + E+L+ GK+P F N
Sbjct: 185 SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN 220
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 110/216 (50%), Gaps = 22/216 (10%)
Query: 76 NRILGQGGQGTVYKGRLED---GRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRN 132
+R++G+G G VY G D RI KS + E+ ++E F+ E ++ +NH N
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI--TEMQQVEAFLREGLLMRGLNHPN 83
Query: 133 VVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAY 191
V+ L+G L E P ++ ++ +G L Q + +N T + ++VA + Y
Sbjct: 84 VLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNP----TVKDLISFGLQVARGMEY 139
Query: 192 LHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD------QTHVTTKIQGTFG 245
L A HRD+ + N +LDE + KVADFG ++ I +D Q H ++ +
Sbjct: 140 L---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDI-LDREYYSVQQHRHARLPVKWT 195
Query: 246 YLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 281
L E Q+ + T KSDV+SFGV+L ELLT P +
Sbjct: 196 AL--ESLQTYRFTTKSDVWSFGVLLWELLTRGAPPY 229
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G VY+G + + +AVK K E+ ++EEF+ E ++ +I H N+V+LL
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G C ++ EF+ G L +L + ++ E ++ + +A +++ A+ YL
Sbjct: 74 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQE---VSAVVLLYMATQISSAMEYLEK--- 127
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 128 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF 187
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
+ KSDV++FGV+L E+ T G P
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSP 210
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 132/303 (43%), Gaps = 40/303 (13%)
Query: 71 NHFNVNRILGQGGQGTVYKGRL--EDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
F + R+LG+G G+V + +L EDG + V L D +EEF+ E + +
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 129 NHRNVVKLLGCCLET------EFPLLVYEFIPNGTLYQH-LHDRHQNEEYPLTWEMRFRV 181
+H +V KL+G L + P+++ F+ +G L+ L R + L + R
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 182 AIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 241
+++A + YL +S HRD+ + N +L E VADFG S+ I + Q
Sbjct: 143 MVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYR----Q 195
Query: 242 GTFGYLDPEYHQSSQLTDK-----SDVYSFGVVLVELLT-GKKPIFSTGNTSQENVSLAA 295
G L ++ L D SDV++FGV + E++T G+ P EN +
Sbjct: 196 GCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI-----ENAEIYN 250
Query: 296 YFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEVSMELNGIR 355
Y + R + +++ +L +C + K+RP+ + MEL I
Sbjct: 251 YLIGGNRLKQPPECMEE-------------VYDLMYQCWSADPKQRPSFTCLRMELENIL 297
Query: 356 GSI 358
G +
Sbjct: 298 GHL 300
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G VY+G + + +AVK K E+ ++EEF+ E ++ +I H N+V+LL
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G C ++ EF+ G L +L + ++ E + + +A +++ A+ YL
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN- 133
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 134 --FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKF 191
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
+ KSDV++FGV+L E+ T G P
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSP 214
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 126/282 (44%), Gaps = 31/282 (10%)
Query: 70 TNHFNVNRILGQGGQGTVYKGR-LEDGRIIAVK--KSKLAVDDEELYKLEEFINEIFILS 126
++ + + ILG GG V+ R L R +AVK ++ LA D + F E +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLR---FRREAQNAA 67
Query: 127 QINHRNVVKLLGCC-LETE---FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVA 182
+NH +V + ET P +V E++ TL +H E P+T + V
Sbjct: 68 ALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVH-----TEGPMTPKRAIEVI 122
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--TKI 240
+ AL + H I HRD+K NI++ KV DFG ++ IA VT +
Sbjct: 123 ADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 241 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH- 299
GT YL PE + + +SDVYS G VL E+LTG+ P TG++ VS+A V
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF--TGDSP---VSVAYQHVRE 234
Query: 300 -----SMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDL 336
S R L LD V+K KN + AE DL
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADL 276
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G VY+G + + +AVK K E+ ++EEF+ E ++ +I H N+V+LL
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G C ++ EF+ G L +L + ++ E + + +A +++ A+ YL
Sbjct: 77 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN- 132
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 133 --FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKF 190
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
+ KSDV++FGV+L E+ T G P
Sbjct: 191 SIKSDVWAFGVLLWEIATYGMSP 213
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 143/307 (46%), Gaps = 44/307 (14%)
Query: 72 HFNVNRILGQGGQGTVYKGR---LED--GRIIAVKKSKLAVDDEELYKLEEFINEIFILS 126
H R LG+G G+V R L+D G ++AVKK + + ++ L +F EI IL
Sbjct: 14 HLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 69
Query: 127 QINHRNVVKLLGCCLET--EFPLLVYEFIPNGTLYQHLHDRHQNEEYP--LTWEMRFRVA 182
+ H N+VK G C L+ EF+P G+L ++L + ++ L + +
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKG 129
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
+E G Y+H RD+ + NIL++ R K+ DFG +K + D+ K G
Sbjct: 130 MEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 243 T---FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH 299
F Y PE S+ + SDV+SFGVVL EL T +++ S A F+
Sbjct: 181 ESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMR 229
Query: 300 SMRKNRLYHILDDQVMKLGKKNQIVAFAN--------LAERCLDLNGKKRPTMEEVSMEL 351
+ ++ ++ +++L K N + + + C + N +RP+ ++++ +
Sbjct: 230 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 289
Query: 352 NGIRGSI 358
+ IR ++
Sbjct: 290 DQIRDNM 296
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G VY+G + + +AVK K E+ ++EEF+ E ++ +I H N+V+LL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G C ++ EF+ G L +L + ++ E ++ + +A +++ A+ YL
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQE---VSAVVLLYMATQISSAMEYLE---K 129
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
+ KSDV++FGV+L E+ T G P
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G VY+G + + +AVK K E+ ++EEF+ E ++ +I H N+V+LL
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G C ++ EF+ G L +L + ++ E + + +A +++ A+ YL
Sbjct: 77 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN- 132
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 133 --FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF 190
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
+ KSDV++FGV+L E+ T G P
Sbjct: 191 SIKSDVWAFGVLLWEIATYGMSP 213
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G VY+G + + +AVK K E+ ++EEF+ E ++ +I H N+V+LL
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G C ++ EF+ G L +L + ++ E + + +A +++ A+ YL
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN- 136
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 137 --FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF 194
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
+ KSDV++FGV+L E+ T G P
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSP 217
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 49/288 (17%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
+G G GTVYKG+ +AVK L V D + + F NE+ +L + H N++ +G
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKI--LKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR------VAIEVAGALAYL 192
+ + V ++ +LY+HLH + E +F+ +A + A + YL
Sbjct: 100 YMTKDNLAI-VTQWCEGSSLYKHLHVQ----------ETKFQMFQLIDIARQTAQGMDYL 148
Query: 193 HSGASSPIYHRDIKSTNILLDERYRAKVADFG----TSKFIAMDQTHVTTKIQGTFGYLD 248
H+ I HRD+KS NI L E K+ DFG S++ Q T G+ ++
Sbjct: 149 HA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT---GSVLWMA 202
Query: 249 PE---YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNR 305
PE ++ + +SDVYS+G+VL EL+TG+ P +S N + + + S ++
Sbjct: 203 PEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP-YSHINNRDQIIFMVGRGYASPDLSK 261
Query: 306 LYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV--SMEL 351
LY KN A L C+ ++RP ++ S+EL
Sbjct: 262 LY------------KNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL 297
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G VY+G + + +AVK K E+ ++EEF+ E ++ +I H N+V+LL
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G C ++ EF+ G L +L + ++ E ++ + +A +++ A+ YL
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE---VSAVVLLYMATQISSAMEYLE---K 134
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 194
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
+ KSDV++FGV+L E+ T G P
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSP 217
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G VY+G + + +AVK K E+ ++EEF+ E ++ +I H N+V+LL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G C ++ EF+ G L +L + ++ E ++ + +A +++ A+ YL
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE---VSAVVLLYMATQISSAMEYLE---K 129
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
+ KSDV++FGV+L E+ T G P
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSP 212
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 108/227 (47%), Gaps = 23/227 (10%)
Query: 75 VNRILGQGGQGTVYKGRL------EDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
+ R LG+G G V+ +D ++AVK K A D+ ++F E +L+ +
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNAR----KDFHREAELLTNL 72
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDR--------HQNEEYPLTWEMRFR 180
H ++VK G C+E + ++V+E++ +G L + L N LT
Sbjct: 73 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 181 VAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTHVTTK 239
+A ++A + YL AS HRD+ + N L+ E K+ DFG S+ + + D V
Sbjct: 133 IAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGH 189
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
++ PE + T +SDV+S GVVL E+ T GK+P + N
Sbjct: 190 TMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN 236
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G VY+G + + +AVK K E+ ++EEF+ E ++ +I H N+V+LL
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G C ++ EF+ G L +L + ++ E ++ + +A +++ A+ YL
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE---VSAVVLLYMATQISSAMEYLEK--- 127
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 128 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF 187
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
+ KSDV++FGV+L E+ T G P
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSP 210
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G VY+G + + +AVK K E+ ++EEF+ E ++ +I H N+V+LL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G C ++ EF+ G L +L + ++ E ++ + +A +++ A+ YL
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQE---VSAVVLLYMATQISSAMEYLE---K 129
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
+ KSDV++FGV+L E+ T G P
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G VY+G + + +AVK K E+ ++EEF+ E ++ +I H N+V+LL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G C ++ EF+ G L +L + ++ E ++ + +A +++ A+ YL
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE---VSAVVLLYMATQISSAMEYLE---K 129
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
+ KSDV++FGV+L E+ T G P
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G VY+G + + +AVK K E+ ++EEF+ E ++ +I H N+V+LL
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G C ++ EF+ G L +L + ++ E ++ + +A +++ A+ YL
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE---VSAVVLLYMATQISSAMEYLE---K 127
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 128 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKF 187
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
+ KSDV++FGV+L E+ T G P
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSP 210
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G VY+G + + +AVK K E+ ++EEF+ E ++ +I H N+V+LL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G C ++ EF+ G L +L + ++ E + + +A +++ A+ YL
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN- 131
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 132 --FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
+ KSDV++FGV+L E+ T G P
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G VY+G + + +AVK K E+ ++EEF+ E ++ +I H N+V+LL
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 88
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G C ++ EF+ G L +L + ++ E + + +A +++ A+ YL
Sbjct: 89 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLE---K 142
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 143 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 202
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
+ KSDV++FGV+L E+ T G P
Sbjct: 203 SIKSDVWAFGVLLWEIATYGMSP 225
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G VY+G + + +AVK K E+ ++EEF+ E ++ +I H N+V+LL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G C ++ EF+ G L +L + ++ E + + +A +++ A+ YL
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN- 131
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 132 --FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
+ KSDV++FGV+L E+ T G P
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G VY+G + + +AVK K E+ ++EEF+ E ++ +I H N+V+LL
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G C ++ EF+ G L +L + ++ E + + +A +++ A+ YL
Sbjct: 81 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN- 136
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 137 --FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 194
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
+ KSDV++FGV+L E+ T G P
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSP 217
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G VY+G + + +AVK K E+ ++EEF+ E ++ +I H N+V+LL
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G C ++ EF+ G L +L + ++ E + + +A +++ A+ YL
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLE---K 134
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 194
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
+ KSDV++FGV+L E+ T G P
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSP 217
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G VY+G + + +AVK K E+ ++EEF+ E ++ +I H N+V+LL
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 79
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G C ++ EF+ G L +L + ++ E + + +A +++ A+ YL
Sbjct: 80 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN- 135
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 136 --FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 193
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
+ KSDV++FGV+L E+ T G P
Sbjct: 194 SIKSDVWAFGVLLWEIATYGMSP 216
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 119/286 (41%), Gaps = 41/286 (14%)
Query: 67 DKATNHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFIL 125
D F+ R +G G G VY R + + ++A+KK + + K ++ I E+ L
Sbjct: 11 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYS-GKQSNEKWQDIIKEVRFL 69
Query: 126 SQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEV 185
++ H N ++ GC L LV E+ D + + PL +A
Sbjct: 70 QKLRHPNTIQYRGCYLREHTAWLVMEYCLGSA-----SDLLEVHKKPLQ---EVEIAAVT 121
Query: 186 AGAL---AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
GAL AYLHS + HRD+K+ NILL E K+ DFG++ +A V G
Sbjct: 122 HGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----G 173
Query: 243 TFGYLDPEY---HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH 299
T ++ PE Q K DV+S G+ +EL K P+F+ S
Sbjct: 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----------- 222
Query: 300 SMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTME 345
LYHI ++ L + F N + CL + RPT E
Sbjct: 223 ------LYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSE 262
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G VY+G + + +AVK K E+ ++EEF+ E ++ +I H N+V+LL
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G C ++ EF+ G L +L + ++ E + + +A +++ A+ YL
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLEKKN- 136
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 137 --FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 194
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
+ KSDV++FGV+L E+ T G P
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSP 217
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 117/275 (42%), Gaps = 30/275 (10%)
Query: 73 FNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRN 132
F++ R LG+G G VY R + I K E+ + E+ I S + H N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 133 VVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYL 192
+++L G + L+ E+ P GT+Y+ L + +E + E+A AL+Y
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE-----QRTATYITELANALSYC 128
Query: 193 HSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYH 252
HS + HRDIK N+LL K+ADFG S + + GT YL PE
Sbjct: 129 HSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT---LCGTLDYLPPEMI 182
Query: 253 QSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDD 312
+ +K D++S GV+ E L G P +T QE R +R+ D
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGMPPF--EAHTYQETYR---------RISRVEFTFPD 231
Query: 313 QVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
V + + +L R L N +R T+ EV
Sbjct: 232 FVTEGAR--------DLISRLLKHNASQRLTLAEV 258
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G VY+G + + +AVK K E+ ++EEF+ E ++ +I H N+V+LL
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G C ++ EF+ G L +L + ++ E + + +A +++ A+ YL
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLE---K 131
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 132 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 191
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
+ KSDV++FGV+L E+ T G P
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSP 214
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G VY+G + + +AVK K E+ ++EEF+ E ++ +I H N+V+LL
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G C ++ EF+ G L +L + ++ E + + +A +++ A+ YL
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLE---K 131
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 132 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 191
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
+ KSDV++FGV+L E+ T G P
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSP 214
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 126/282 (44%), Gaps = 31/282 (10%)
Query: 70 TNHFNVNRILGQGGQGTVYKGR-LEDGRIIAVK--KSKLAVDDEELYKLEEFINEIFILS 126
++ + + ILG GG V+ R L R +AVK ++ LA D + F E +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLR---FRREAQNAA 67
Query: 127 QINHRNVVKLLGCC-LETE---FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVA 182
+NH +V + ET P +V E++ TL +H E P+T + V
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-----TEGPMTPKRAIEVI 122
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--TKI 240
+ AL + H I HRD+K NI++ KV DFG ++ IA VT +
Sbjct: 123 ADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 241 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH- 299
GT YL PE + + +SDVYS G VL E+LTG+ P TG++ VS+A V
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF--TGDSP---VSVAYQHVRE 234
Query: 300 -----SMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDL 336
S R L LD V+K KN + AE DL
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADL 276
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 123/282 (43%), Gaps = 31/282 (10%)
Query: 70 TNHFNVNRILGQGGQGTVYKGR-LEDGRIIAVK--KSKLAVDDEELYKLEEFINEIFILS 126
++ + + ILG GG V+ R L R +AVK ++ LA D + F E +
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLR---FRREAQNAA 84
Query: 127 QINHRNVVKLLGCC-LETE---FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVA 182
+NH +V + ET P +V E++ TL +H E P+T + V
Sbjct: 85 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-----TEGPMTPKRAIEVI 139
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVT--TKI 240
+ AL + H I HRD+K NI++ KV DFG ++ IA VT +
Sbjct: 140 ADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 196
Query: 241 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH- 299
GT YL PE + + +SDVYS G VL E+LTG+ P T VS+A V
Sbjct: 197 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF-----TGDSPVSVAYQHVRE 251
Query: 300 -----SMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDL 336
S R L LD V+K KN + AE DL
Sbjct: 252 DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADL 293
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 14/204 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAV---DDEELYKLEEFINEIFILSQINHRNVVK 135
LG GG TVY L + I+ +K + A+ E+ L+ F E+ SQ++H+N+V
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 136 LLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSG 195
++ E + LV E+I TL +++ PL+ + ++ + + H
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-----PLSVDTAINFTNQILDGIKHAHDM 130
Query: 196 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 255
I HRDIK NIL+D K+ DFG +K ++ T + GT Y PE +
Sbjct: 131 R---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGE 187
Query: 256 QLTDKSDVYSFGVVLVELLTGKKP 279
+ +D+YS G+VL E+L G+ P
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 119/286 (41%), Gaps = 41/286 (14%)
Query: 67 DKATNHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFIL 125
D F+ R +G G G VY R + + ++A+KK + + K ++ I E+ L
Sbjct: 50 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYS-GKQSNEKWQDIIKEVRFL 108
Query: 126 SQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEV 185
++ H N ++ GC L LV E+ D + + PL +A
Sbjct: 109 QKLRHPNTIQYRGCYLREHTAWLVMEYCLGSA-----SDLLEVHKKPLQ---EVEIAAVT 160
Query: 186 AGAL---AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
GAL AYLHS + HRD+K+ NILL E K+ DFG++ +A V G
Sbjct: 161 HGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----G 212
Query: 243 TFGYLDPEY---HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH 299
T ++ PE Q K DV+S G+ +EL K P+F+ S
Sbjct: 213 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA----------- 261
Query: 300 SMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTME 345
LYHI ++ L + F N + CL + RPT E
Sbjct: 262 ------LYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSE 301
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 118/258 (45%), Gaps = 34/258 (13%)
Query: 52 GSVIDRCKLFSSKELDKATNHFNVNRI-----LGQGGQGTVYKGRL------EDGRIIAV 100
G +I+ + FS D +H I LG+G G V+ +D ++AV
Sbjct: 21 GHIIENPQYFS----DACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAV 76
Query: 101 KKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQ 160
K K A + ++F E +L+ + H+++V+ G C E L+V+E++ +G L +
Sbjct: 77 KALKEASESAR----QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNR 132
Query: 161 HLHDRHQNEEY----------PLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNI 210
L + + PL VA +VA + YL A HRD+ + N
Sbjct: 133 FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNC 189
Query: 211 LLDERYRAKVADFGTSKFI-AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVV 269
L+ + K+ DFG S+ I + D V + ++ PE + T +SDV+SFGVV
Sbjct: 190 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV 249
Query: 270 LVELLT-GKKPIFSTGNT 286
L E+ T GK+P + NT
Sbjct: 250 LWEIFTYGKQPWYQLSNT 267
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 121/252 (48%), Gaps = 18/252 (7%)
Query: 71 NHFNVNRILGQGGQGTVYKGRL--EDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
N + +ILG+G G+V +G L EDG + V + +D+ ++EEF++E +
Sbjct: 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF 93
Query: 129 NHRNVVKLLGCCLETEF-----PLLVYEFIPNGTLYQH-LHDRHQNEEYPLTWEMRFRVA 182
+H NV++LLG C+E P+++ F+ G L+ + L+ R + + + +
Sbjct: 94 SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFM 153
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKI-Q 241
+++A + YL ++ HRD+ + N +L + VADFG SK I + +I +
Sbjct: 154 VDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAK 210
Query: 242 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQENVSLAAYFVHS 300
++ E T KSDV++FGV + E+ T G P +N + Y +H
Sbjct: 211 MPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPY-----PGVQNHEMYDYLLHG 265
Query: 301 MRKNRLYHILDD 312
R + LD+
Sbjct: 266 HRLKQPEDCLDE 277
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 121/232 (52%), Gaps = 23/232 (9%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLE--DGRIIAVKKSKLAVDDEELYKLEEFIN 120
+KELD ATN ++++++G G G V GRL+ + I+V L V E + +F+
Sbjct: 27 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLG 83
Query: 121 EIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR 180
E I+ Q +H N+++L G +++ ++V E++ NG+L L +H + +F
Sbjct: 84 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KH---------DAQFT 133
Query: 181 VAIEVAGALAYLHSG----ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 236
V I++ G L + SG + HRD+ + NIL++ KV+DFG S+ + D
Sbjct: 134 V-IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 192
Query: 237 TTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
T G + PE + T SDV+S+G+VL E+++ G++P + N
Sbjct: 193 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 244
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 119/232 (51%), Gaps = 23/232 (9%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLE--DGRIIAVKKSKLAVDDEELYKLEEFIN 120
+KELD ATN ++++++G G G V GRL+ + I+V L V E + +F+
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLG 95
Query: 121 EIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR 180
E I+ Q +H N+++L G +++ ++V E++ NG+L L R + ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQF--------- 144
Query: 181 VAIEVAGALAYLHSG----ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 236
I++ G L + SG + HRD+ + NIL++ KV+DFG S+ + D
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 237 TTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
T G + PE + T SDV+S+G+VL E+++ G++P + N
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 121/232 (52%), Gaps = 23/232 (9%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLE--DGRIIAVKKSKLAVDDEELYKLEEFIN 120
+KELD ATN ++++++G G G V GRL+ + I+V L V E + +F+
Sbjct: 10 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLG 66
Query: 121 EIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR 180
E I+ Q +H N+++L G +++ ++V E++ NG+L L +H + +F
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KH---------DAQFT 116
Query: 181 VAIEVAGALAYLHSG----ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 236
V I++ G L + SG + HRD+ + NIL++ KV+DFG S+ + D
Sbjct: 117 V-IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 175
Query: 237 TTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
T G + PE + T SDV+S+G+VL E+++ G++P + N
Sbjct: 176 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 227
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 108/209 (51%), Gaps = 16/209 (7%)
Query: 77 RILGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLE-EFINEIFILSQINHRNVV 134
++LG G GTVYKG + +G + + + +++ K EF++E I++ ++H ++V
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 135 KLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVAIEVAGALAYL 192
+LLG CL LV + +P+G L +++H+ N + L W +++A + YL
Sbjct: 104 RLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYL 156
Query: 193 HSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK-IQGTFGYLDPEY 251
+ HRD+ + N+L+ K+ DFG ++ + D+ + ++ E
Sbjct: 157 EERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 252 HQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ T +SDV+S+GV + EL+T G KP
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMTFGGKP 242
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 127/271 (46%), Gaps = 33/271 (12%)
Query: 79 LGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+GQG GTVY + G+ +A+++ L ++ K E INEI ++ + + N+V L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNL----QQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
L + +V E++ G+L + + +E V E AL +LHS
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG------QIAAVCRECLQALEFLHSNQ- 136
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
+ HRDIKS NILL K+ DFG I +Q+ +T + GT ++ PE
Sbjct: 137 --VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAY 193
Query: 258 TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDDQVMKL 317
K D++S G++ +E++ G+ P + EN A LY I + +L
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLN------ENPLRA-----------LYLIATNGTPEL 236
Query: 318 GKKNQIVA-FANLAERCLDLNGKKRPTMEEV 347
++ A F + RCLD++ +KR + +E+
Sbjct: 237 QNPEKLSAIFRDFLNRCLDMDVEKRGSAKEL 267
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 119/232 (51%), Gaps = 27/232 (11%)
Query: 71 NHFNVNRILGQGGQGTVY----KGRLEDGRIIAVK---KSKLAVDDEELYKLEEFINEIF 123
+HF + ++LGQG G V+ R + G + A+K K+ L V D K+E I
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDI---- 83
Query: 124 ILSQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWE-MRFRV 181
L+ +NH VVKL +TE L L+ +F+ G L+ L ++E T E ++F +
Sbjct: 84 -LADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFTEEDVKFYL 136
Query: 182 AIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 241
A E+A L +LHS I +RD+K NILLDE K+ DFG SK A+D
Sbjct: 137 A-ELALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK-EAIDHEKKAYSFC 191
Query: 242 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 293
GT Y+ PE + +D +S+GV++ E+LTG P G +E ++L
Sbjct: 192 GTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF--QGKDRKETMTL 241
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 108/209 (51%), Gaps = 16/209 (7%)
Query: 77 RILGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLE-EFINEIFILSQINHRNVV 134
++LG G GTVYKG + +G + + + +++ K EF++E I++ ++H ++V
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 135 KLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVAIEVAGALAYL 192
+LLG CL LV + +P+G L +++H+ N + L W +++A + YL
Sbjct: 81 RLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYL 133
Query: 193 HSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK-IQGTFGYLDPEY 251
+ HRD+ + N+L+ K+ DFG ++ + D+ + ++ E
Sbjct: 134 EERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 190
Query: 252 HQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ T +SDV+S+GV + EL+T G KP
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMTFGGKP 219
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 119/232 (51%), Gaps = 23/232 (9%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLE--DGRIIAVKKSKLAVDDEELYKLEEFIN 120
+KELD ATN ++++++G G G V GRL+ + I+V L V E + +F+
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLG 95
Query: 121 EIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR 180
E I+ Q +H N+++L G +++ ++V E++ NG+L L R + ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQF--------- 144
Query: 181 VAIEVAGALAYLHSG----ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 236
I++ G L + SG + HRD+ + NIL++ KV+DFG S+ + D
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 237 TTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
T G + PE + T SDV+S+G+VL E+++ G++P + N
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 121/232 (52%), Gaps = 23/232 (9%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLE--DGRIIAVKKSKLAVDDEELYKLEEFIN 120
+KELD ATN ++++++G G G V GRL+ + I+V L V E + +F+
Sbjct: 37 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLG 93
Query: 121 EIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR 180
E I+ Q +H N+++L G +++ ++V E++ NG+L L +H + +F
Sbjct: 94 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KH---------DAQFT 143
Query: 181 VAIEVAGALAYLHSG----ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 236
V I++ G L + SG + HRD+ + NIL++ KV+DFG S+ + D
Sbjct: 144 V-IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 202
Query: 237 TTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
T G + PE + T SDV+S+G+VL E+++ G++P + N
Sbjct: 203 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 254
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 119/232 (51%), Gaps = 23/232 (9%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLE--DGRIIAVKKSKLAVDDEELYKLEEFIN 120
+KELD ATN ++++++G G G V GRL+ + I+V L V E + +F+
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLG 95
Query: 121 EIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR 180
E I+ Q +H N+++L G +++ ++V E++ NG+L L R + ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQF--------- 144
Query: 181 VAIEVAGALAYLHSG----ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 236
I++ G L + SG + HRD+ + NIL++ KV+DFG S+ + D
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 237 TTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
T G + PE + T SDV+S+G+VL E+++ G++P + N
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 119/232 (51%), Gaps = 23/232 (9%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLE--DGRIIAVKKSKLAVDDEELYKLEEFIN 120
+KELD ATN ++++++G G G V GRL+ + I+V L V E + +F+
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLG 95
Query: 121 EIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR 180
E I+ Q +H N+++L G +++ ++V E++ NG+L L R + ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQF--------- 144
Query: 181 VAIEVAGALAYLHSG----ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 236
I++ G L + SG + HRD+ + NIL++ KV+DFG S+ + D
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 237 TTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
T G + PE + T SDV+S+G+VL E+++ G++P + N
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G VY+G + + +AVK K E+ ++EEF+ E ++ +I H N+V+LL
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 282
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G C ++ EF+ G L +L + ++ E ++ + +A +++ A+ YL
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE---VSAVVLLYMATQISSAMEYLEKKN- 338
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HR++ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 339 --FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 396
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
+ KSDV++FGV+L E+ T G P
Sbjct: 397 SIKSDVWAFGVLLWEIATYGMSP 419
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 121/232 (52%), Gaps = 23/232 (9%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLE--DGRIIAVKKSKLAVDDEELYKLEEFIN 120
+KELD ATN ++++++G G G V GRL+ + I+V L V E + +F+
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLG 95
Query: 121 EIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR 180
E I+ Q +H N+++L G +++ ++V E++ NG+L L +H + +F
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KH---------DAQFT 145
Query: 181 VAIEVAGALAYLHSG----ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 236
V I++ G L + SG + HRD+ + NIL++ KV+DFG S+ + D
Sbjct: 146 V-IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 237 TTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
T G + PE + T SDV+S+G+VL E+++ G++P + N
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 107/226 (47%), Gaps = 25/226 (11%)
Query: 79 LGQGGQGTVYKGRL------EDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRN 132
LG+G G V+ +D ++AVK K A + ++F E +L+ + H++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR----QDFQREAELLTMLQHQH 75
Query: 133 VVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEY----------PLTWEMRFRVA 182
+V+ G C E L+V+E++ +G L + L + + PL VA
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTHVTTKIQ 241
+VA + YL A HRD+ + N L+ + K+ DFG S+ I + D V +
Sbjct: 136 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 192
Query: 242 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNT 286
++ PE + T +SDV+SFGVVL E+ T GK+P + NT
Sbjct: 193 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 238
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 107/226 (47%), Gaps = 25/226 (11%)
Query: 79 LGQGGQGTVYKGRL------EDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRN 132
LG+G G V+ +D ++AVK K A + ++F E +L+ + H++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR----QDFQREAELLTMLQHQH 81
Query: 133 VVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEY----------PLTWEMRFRVA 182
+V+ G C E L+V+E++ +G L + L + + PL VA
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTHVTTKIQ 241
+VA + YL A HRD+ + N L+ + K+ DFG S+ I + D V +
Sbjct: 142 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 198
Query: 242 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNT 286
++ PE + T +SDV+SFGVVL E+ T GK+P + NT
Sbjct: 199 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 244
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G VY+G + + +AVK K E+ ++EEF+ E ++ +I H N+V+LL
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 279
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G C ++ EF+ G L +L + ++ E + + +A +++ A+ YL
Sbjct: 280 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV---VLLYMATQISSAMEYLE---K 333
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HR++ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 334 KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 393
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
+ KSDV++FGV+L E+ T G P
Sbjct: 394 SIKSDVWAFGVLLWEIATYGMSP 416
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 119/232 (51%), Gaps = 23/232 (9%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLE--DGRIIAVKKSKLAVDDEELYKLEEFIN 120
+KELD ATN ++++++G G G V GRL+ + I+V L V E + +F+
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLG 95
Query: 121 EIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR 180
E I+ Q +H N+++L G +++ ++V E++ NG+L L R + ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQF--------- 144
Query: 181 VAIEVAGALAYLHSG----ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 236
I++ G L + SG + HRD+ + NIL++ KV+DFG ++ + D
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAA 204
Query: 237 TTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
T G + PE + T SDV+S+G+VL E+++ G++P + N
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 120/232 (51%), Gaps = 23/232 (9%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLE--DGRIIAVKKSKLAVDDEELYKLEEFIN 120
+KELD ATN ++++++G G G V GRL+ + I+V L V E + +F+
Sbjct: 10 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLG 66
Query: 121 EIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR 180
E I+ Q +H N+++L G +++ ++V E + NG+L L +H + +F
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-KH---------DAQFT 116
Query: 181 VAIEVAGALAYLHSG----ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 236
V I++ G L + SG + HRD+ + NIL++ KV+DFG S+ + D
Sbjct: 117 V-IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 175
Query: 237 TTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
T G + PE + T SDV+S+G+VL E+++ G++P + N
Sbjct: 176 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 227
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G VY+G + + +AVK K E+ ++EEF+ E ++ +I H N+V+LL
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKHPNLVQLL 321
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G C ++ EF+ G L +L + ++ E + + +A +++ A+ YL
Sbjct: 322 GVCTREPPFYIITEFMTYGNLLDYLRECNRQE---VNAVVLLYMATQISSAMEYLEKKN- 377
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HR++ + N L+ E + KVADFG S+ + D + + PE ++
Sbjct: 378 --FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 435
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
+ KSDV++FGV+L E+ T G P
Sbjct: 436 SIKSDVWAFGVLLWEIATYGMSP 458
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 109/233 (46%), Gaps = 30/233 (12%)
Query: 75 VNRILGQGGQGTVYKGRL------EDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
+ R LG+G G V+ +D ++AVK A+ D L ++F E +L+ +
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVK----ALKDPTLAARKDFQREAELLTNL 74
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL-------------HDRHQNEEYPLTW 175
H ++VK G C + + ++V+E++ +G L + L R E L+
Sbjct: 75 QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLS- 133
Query: 176 EMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQT 234
+A ++A + YL AS HRD+ + N L+ K+ DFG S+ + + D
Sbjct: 134 -QMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYY 189
Query: 235 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNT 286
V ++ PE + T +SDV+SFGV+L E+ T GK+P F NT
Sbjct: 190 RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT 242
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 118/232 (50%), Gaps = 23/232 (9%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLE--DGRIIAVKKSKLAVDDEELYKLEEFIN 120
+KELD ATN ++++++G G G V GRL+ + I+V L V E + +F+
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLG 95
Query: 121 EIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR 180
E I+ Q +H N+++L G +++ ++V E + NG+L L R + ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQF--------- 144
Query: 181 VAIEVAGALAYLHSG----ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 236
I++ G L + SG + HRD+ + NIL++ KV+DFG S+ + D
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 237 TTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
T G + PE + T SDV+S+G+VL E+++ G++P + N
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 14/226 (6%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAV----DDEELYKL 115
++ E + A ++R LGQG G VY+G + G + ++++A+ + + +
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 66
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHD-RHQNEEYPL- 173
EF+NE ++ + N +VV+LLG + + L++ E + G L +L R + E P+
Sbjct: 67 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 174 ---TWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA 230
+ ++A E+A +AYL++ HRD+ + N ++ E + K+ DFG ++ I
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIX 183
Query: 231 -MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 275
D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 184 ETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 129/292 (44%), Gaps = 41/292 (14%)
Query: 78 ILGQGGQGTVYK-GRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL 136
+LG+G G K E G ++ +K+ L DEE + F+ E+ ++ + H NV+K
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKE--LIRFDEETQR--TFLKEVKVMRCLEHPNVLKF 72
Query: 137 LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGA 196
+G + + + E+I GTL + + + +YP W R A ++A +AYLHS
Sbjct: 73 IGVLYKDKRLNFITEYIKGGTLRGII--KSMDSQYP--WSQRVSFAKDIASGMAYLHSMN 128
Query: 197 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT-------------KIQGT 243
I HRD+ S N L+ E VADFG ++ + ++T + G
Sbjct: 129 ---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185
Query: 244 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRK 303
++ PE +K DV+SFG+VL E I N + + F ++R
Sbjct: 186 PYWMAPEMINGRSYDEKVDVFSFGIVLCE-------IIGRVNADPDYLPRTMDFGLNVRG 238
Query: 304 NRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEVSMELNGIR 355
LD + N +F + RC DL+ +KRP+ ++ L +R
Sbjct: 239 -----FLD----RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 113/226 (50%), Gaps = 14/226 (6%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAV----DDEELYKL 115
+F E + A ++R LGQG G VY+G + G + ++++A+ + + +
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 63
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHD-RHQNEEYPL- 173
EF+NE ++ + N +VV+LLG + + L++ E + G L +L R + E P+
Sbjct: 64 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 123
Query: 174 ---TWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI- 229
+ ++A E+A +AYL++ HRD+ + N ++ E + K+ DFG ++ I
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 180
Query: 230 AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 275
D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 181 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 118/232 (50%), Gaps = 23/232 (9%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLE--DGRIIAVKKSKLAVDDEELYKLEEFIN 120
+KELD ATN ++++++G G G V GRL+ + I+V L V E + +F+
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLG 95
Query: 121 EIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR 180
E I+ Q +H N+++L G +++ ++V E++ NG+L L R + ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQF--------- 144
Query: 181 VAIEVAGALAYLHSG----ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 236
I++ G L + SG + HRD+ + NIL++ KV+DFG + + D
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAA 204
Query: 237 TTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
T G + PE + T SDV+S+G+VL E+++ G++P + N
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 111/221 (50%), Gaps = 14/221 (6%)
Query: 65 ELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAV----DDEELYKLEEFIN 120
E + A ++R LGQG G VY+G + G + ++++A+ + + + EF+N
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 121 EIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHD-RHQNEEYPL----TW 175
E ++ + N +VV+LLG + + L++ E + G L +L R + E P+ +
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 176 EMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA-MDQT 234
++A E+A +AYL++ HRD+ + N ++ E + K+ DFG ++ I D
Sbjct: 123 SKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 179
Query: 235 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 275
K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 180 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 127/271 (46%), Gaps = 33/271 (12%)
Query: 79 LGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+GQG GTVY + G+ +A+++ L ++ K E INEI ++ + + N+V L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNL----QQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
L + +V E++ G+L + + +E V E AL +LHS
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG------QIAAVCRECLQALEFLHSNQ- 136
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
+ HRDIKS NILL K+ DFG I +Q+ +++ GT ++ PE
Sbjct: 137 --VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSEMVGTPYWMAPEVVTRKAY 193
Query: 258 TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDDQVMKL 317
K D++S G++ +E++ G+ P + EN A LY I + +L
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLN------ENPLRA-----------LYLIATNGTPEL 236
Query: 318 GKKNQIVA-FANLAERCLDLNGKKRPTMEEV 347
++ A F + RCLD++ +KR + +E+
Sbjct: 237 QNPEKLSAIFRDFLNRCLDMDVEKRGSAKEL 267
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 142/307 (46%), Gaps = 44/307 (14%)
Query: 72 HFNVNRILGQGGQGTVYKGR---LED--GRIIAVKKSKLAVDDEELYKLEEFINEIFILS 126
H + LG+G G+V R L+D G ++AVKK + + ++ L +F EI IL
Sbjct: 18 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 73
Query: 127 QINHRNVVKLLGCCLET--EFPLLVYEFIPNGTLYQHLHDRHQNEEYP--LTWEMRFRVA 182
+ H N+VK G C L+ E++P G+L +L + ++ L + +
Sbjct: 74 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 133
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
+E G Y+H RD+ + NIL++ R K+ DFG +K + D+ K G
Sbjct: 134 MEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 184
Query: 243 T---FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH 299
F Y PE S+ + SDV+SFGVVL EL T +++ S A F+
Sbjct: 185 ESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMR 233
Query: 300 SMRKNRLYHILDDQVMKLGKKNQIVAFAN--------LAERCLDLNGKKRPTMEEVSMEL 351
+ ++ ++ +++L K N + + + C + N +RP+ ++++ +
Sbjct: 234 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 293
Query: 352 NGIRGSI 358
+ IR ++
Sbjct: 294 DQIRDNM 300
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 142/307 (46%), Gaps = 44/307 (14%)
Query: 72 HFNVNRILGQGGQGTVYKGR---LED--GRIIAVKKSKLAVDDEELYKLEEFINEIFILS 126
H + LG+G G+V R L+D G ++AVKK + + ++ L +F EI IL
Sbjct: 15 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 70
Query: 127 QINHRNVVKLLGCCLET--EFPLLVYEFIPNGTLYQHLHDRHQNEEYP--LTWEMRFRVA 182
+ H N+VK G C L+ E++P G+L +L + ++ L + +
Sbjct: 71 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 130
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
+E G Y+H RD+ + NIL++ R K+ DFG +K + D+ K G
Sbjct: 131 MEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 181
Query: 243 ---TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH 299
F Y PE S+ + SDV+SFGVVL EL T +++ S A F+
Sbjct: 182 ESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMR 230
Query: 300 SMRKNRLYHILDDQVMKLGKKNQIVAFAN--------LAERCLDLNGKKRPTMEEVSMEL 351
+ ++ ++ +++L K N + + + C + N +RP+ ++++ +
Sbjct: 231 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 290
Query: 352 NGIRGSI 358
+ IR ++
Sbjct: 291 DQIRDNM 297
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 142/307 (46%), Gaps = 44/307 (14%)
Query: 72 HFNVNRILGQGGQGTVYKGR---LED--GRIIAVKKSKLAVDDEELYKLEEFINEIFILS 126
H + LG+G G+V R L+D G ++AVKK + + ++ L +F EI IL
Sbjct: 17 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 72
Query: 127 QINHRNVVKLLGCCLET--EFPLLVYEFIPNGTLYQHLHDRHQNEEYP--LTWEMRFRVA 182
+ H N+VK G C L+ E++P G+L +L + ++ L + +
Sbjct: 73 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 132
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
+E G Y+H RD+ + NIL++ R K+ DFG +K + D+ K G
Sbjct: 133 MEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 183
Query: 243 T---FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH 299
F Y PE S+ + SDV+SFGVVL EL T +++ S A F+
Sbjct: 184 ESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMR 232
Query: 300 SMRKNRLYHILDDQVMKLGKKNQIVAFAN--------LAERCLDLNGKKRPTMEEVSMEL 351
+ ++ ++ +++L K N + + + C + N +RP+ ++++ +
Sbjct: 233 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 292
Query: 352 NGIRGSI 358
+ IR ++
Sbjct: 293 DQIRDNM 299
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 142/307 (46%), Gaps = 44/307 (14%)
Query: 72 HFNVNRILGQGGQGTVYKGR---LED--GRIIAVKKSKLAVDDEELYKLEEFINEIFILS 126
H + LG+G G+V R L+D G ++AVKK + + ++ L +F EI IL
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 66
Query: 127 QINHRNVVKLLGCCLET--EFPLLVYEFIPNGTLYQHLHDRHQNEEYP--LTWEMRFRVA 182
+ H N+VK G C L+ E++P G+L +L + ++ L + +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
+E G Y+H RD+ + NIL++ R K+ DFG +K + D+ K G
Sbjct: 127 MEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 177
Query: 243 T---FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH 299
F Y PE S+ + SDV+SFGVVL EL T +++ S A F+
Sbjct: 178 ESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMR 226
Query: 300 SMRKNRLYHILDDQVMKLGKKNQIVAFAN--------LAERCLDLNGKKRPTMEEVSMEL 351
+ ++ ++ +++L K N + + + C + N +RP+ ++++ +
Sbjct: 227 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 286
Query: 352 NGIRGSI 358
+ IR ++
Sbjct: 287 DQIRDNM 293
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 142/307 (46%), Gaps = 44/307 (14%)
Query: 72 HFNVNRILGQGGQGTVYKGR---LED--GRIIAVKKSKLAVDDEELYKLEEFINEIFILS 126
H + LG+G G+V R L+D G ++AVKK + + ++ L +F EI IL
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 84
Query: 127 QINHRNVVKLLGCCLET--EFPLLVYEFIPNGTLYQHLHDRHQNEEYP--LTWEMRFRVA 182
+ H N+VK G C L+ E++P G+L +L + ++ L + +
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
+E G Y+H RD+ + NIL++ R K+ DFG +K + D+ K G
Sbjct: 145 MEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 195
Query: 243 ---TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH 299
F Y PE S+ + SDV+SFGVVL EL T +++ S A F+
Sbjct: 196 ESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMR 244
Query: 300 SMRKNRLYHILDDQVMKLGKKNQIVAFAN--------LAERCLDLNGKKRPTMEEVSMEL 351
+ ++ ++ +++L K N + + + C + N +RP+ ++++ +
Sbjct: 245 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 304
Query: 352 NGIRGSI 358
+ IR ++
Sbjct: 305 DQIRDNM 311
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 125/288 (43%), Gaps = 42/288 (14%)
Query: 73 FNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINH- 130
F + ++G G G VYKGR ++ G++ A+K + D+EE E EI +L + +H
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEE-----EIKQEINMLKKYSHH 80
Query: 131 RNVVKLLGCCLETEFP------LLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIE 184
RN+ G ++ P LV EF G++ + + N L E + E
Sbjct: 81 RNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNT---LKEEWIAYICRE 137
Query: 185 VAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 244
+ L++LH + HRDIK N+LL E K+ DFG S + T I GT
Sbjct: 138 ILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTP 193
Query: 245 GYLDPEYHQSSQLTD-----KSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH 299
++ PE + D KSD++S G+ +E+ G P+ +H
Sbjct: 194 YWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD---------------MH 238
Query: 300 SMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
MR L+ I + +L K F + E CL N +RP E++
Sbjct: 239 PMRA--LFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQL 284
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 118/232 (50%), Gaps = 23/232 (9%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLE--DGRIIAVKKSKLAVDDEELYKLEEFIN 120
+KELD ATN ++++++G G G V GRL+ + I+V L V E + +F+
Sbjct: 39 AKELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLG 95
Query: 121 EIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR 180
E I+ Q +H N+++L G +++ ++V E + NG+L L R + ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQF--------- 144
Query: 181 VAIEVAGALAYLHSG----ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 236
I++ G L + SG + HRD+ + NIL++ KV+DFG S+ + D
Sbjct: 145 TVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 237 TTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
T G + PE + T SDV+S+G+VL E+++ G++P + N
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 142/307 (46%), Gaps = 44/307 (14%)
Query: 72 HFNVNRILGQGGQGTVYKGR---LED--GRIIAVKKSKLAVDDEELYKLEEFINEIFILS 126
H + LG+G G+V R L+D G ++AVKK + + ++ L +F EI IL
Sbjct: 16 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 71
Query: 127 QINHRNVVKLLGCCLET--EFPLLVYEFIPNGTLYQHLHDRHQNEEYP--LTWEMRFRVA 182
+ H N+VK G C L+ E++P G+L +L + ++ L + +
Sbjct: 72 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 131
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
+E G Y+H RD+ + NIL++ R K+ DFG +K + D+ K G
Sbjct: 132 MEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 182
Query: 243 T---FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH 299
F Y PE S+ + SDV+SFGVVL EL T +++ S A F+
Sbjct: 183 ESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMR 231
Query: 300 SMRKNRLYHILDDQVMKLGKKNQIVAFAN--------LAERCLDLNGKKRPTMEEVSMEL 351
+ ++ ++ +++L K N + + + C + N +RP+ ++++ +
Sbjct: 232 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 291
Query: 352 NGIRGSI 358
+ IR ++
Sbjct: 292 DQIRDNM 298
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 142/307 (46%), Gaps = 44/307 (14%)
Query: 72 HFNVNRILGQGGQGTVYKGR---LED--GRIIAVKKSKLAVDDEELYKLEEFINEIFILS 126
H + LG+G G+V R L+D G ++AVKK + + ++ L +F EI IL
Sbjct: 10 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 65
Query: 127 QINHRNVVKLLGCCLET--EFPLLVYEFIPNGTLYQHLHDRHQNEEYP--LTWEMRFRVA 182
+ H N+VK G C L+ E++P G+L +L + ++ L + +
Sbjct: 66 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 125
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
+E G Y+H RD+ + NIL++ R K+ DFG +K + D+ K G
Sbjct: 126 MEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 176
Query: 243 T---FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH 299
F Y PE S+ + SDV+SFGVVL EL T +++ S A F+
Sbjct: 177 ESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMR 225
Query: 300 SMRKNRLYHILDDQVMKLGKKNQIVAFAN--------LAERCLDLNGKKRPTMEEVSMEL 351
+ ++ ++ +++L K N + + + C + N +RP+ ++++ +
Sbjct: 226 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 285
Query: 352 NGIRGSI 358
+ IR ++
Sbjct: 286 DQIRDNM 292
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 142/307 (46%), Gaps = 44/307 (14%)
Query: 72 HFNVNRILGQGGQGTVYKGR---LED--GRIIAVKKSKLAVDDEELYKLEEFINEIFILS 126
H + LG+G G+V R L+D G ++AVKK + + ++ L +F EI IL
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 66
Query: 127 QINHRNVVKLLGCCLET--EFPLLVYEFIPNGTLYQHLHDRHQNEEYP--LTWEMRFRVA 182
+ H N+VK G C L+ E++P G+L +L + ++ L + +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
+E G Y+H RD+ + NIL++ R K+ DFG +K + D+ K G
Sbjct: 127 MEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPG 177
Query: 243 ---TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH 299
F Y PE S+ + SDV+SFGVVL EL T +++ S A F+
Sbjct: 178 ESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMR 226
Query: 300 SMRKNRLYHILDDQVMKLGKKNQIVAFAN--------LAERCLDLNGKKRPTMEEVSMEL 351
+ ++ ++ +++L K N + + + C + N +RP+ ++++ +
Sbjct: 227 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 286
Query: 352 NGIRGSI 358
+ IR ++
Sbjct: 287 DQIRDNM 293
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 142/307 (46%), Gaps = 44/307 (14%)
Query: 72 HFNVNRILGQGGQGTVYKGR---LED--GRIIAVKKSKLAVDDEELYKLEEFINEIFILS 126
H + LG+G G+V R L+D G ++AVKK + + ++ L +F EI IL
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 84
Query: 127 QINHRNVVKLLGCCLET--EFPLLVYEFIPNGTLYQHLHDRHQNEEYP--LTWEMRFRVA 182
+ H N+VK G C L+ E++P G+L +L + ++ L + +
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 144
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
+E G Y+H RD+ + NIL++ R K+ DFG +K + D+ K G
Sbjct: 145 MEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 195
Query: 243 ---TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH 299
F Y PE S+ + SDV+SFGVVL EL T +++ S A F+
Sbjct: 196 ESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMR 244
Query: 300 SMRKNRLYHILDDQVMKLGKKNQIVAFAN--------LAERCLDLNGKKRPTMEEVSMEL 351
+ ++ ++ +++L K N + + + C + N +RP+ ++++ +
Sbjct: 245 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 304
Query: 352 NGIRGSI 358
+ IR ++
Sbjct: 305 DQIRDNM 311
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 142/307 (46%), Gaps = 44/307 (14%)
Query: 72 HFNVNRILGQGGQGTVYKGR---LED--GRIIAVKKSKLAVDDEELYKLEEFINEIFILS 126
H + LG+G G+V R L+D G ++AVKK + + ++ L +F EI IL
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 69
Query: 127 QINHRNVVKLLGCCLET--EFPLLVYEFIPNGTLYQHLHDRHQNEEYP--LTWEMRFRVA 182
+ H N+VK G C L+ E++P G+L +L + ++ L + +
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 129
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
+E G Y+H RD+ + NIL++ R K+ DFG +K + D+ K G
Sbjct: 130 MEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 243 T---FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH 299
F Y PE S+ + SDV+SFGVVL EL T +++ S A F+
Sbjct: 181 ESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMR 229
Query: 300 SMRKNRLYHILDDQVMKLGKKNQIVAFAN--------LAERCLDLNGKKRPTMEEVSMEL 351
+ ++ ++ +++L K N + + + C + N +RP+ ++++ +
Sbjct: 230 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 289
Query: 352 NGIRGSI 358
+ IR ++
Sbjct: 290 DQIRDNM 296
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 142/307 (46%), Gaps = 44/307 (14%)
Query: 72 HFNVNRILGQGGQGTVYKGR---LED--GRIIAVKKSKLAVDDEELYKLEEFINEIFILS 126
H + LG+G G+V R L+D G ++AVKK + + ++ L +F EI IL
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 66
Query: 127 QINHRNVVKLLGCCLET--EFPLLVYEFIPNGTLYQHLHDRHQNEEYP--LTWEMRFRVA 182
+ H N+VK G C L+ E++P G+L +L + ++ L + +
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
+E G Y+H RD+ + NIL++ R K+ DFG +K + D+ K G
Sbjct: 127 MEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 177
Query: 243 T---FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH 299
F Y PE S+ + SDV+SFGVVL EL T +++ S A F+
Sbjct: 178 ESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMR 226
Query: 300 SMRKNRLYHILDDQVMKLGKKNQIVAFAN--------LAERCLDLNGKKRPTMEEVSMEL 351
+ ++ ++ +++L K N + + + C + N +RP+ ++++ +
Sbjct: 227 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 286
Query: 352 NGIRGSI 358
+ IR ++
Sbjct: 287 DQIRDNM 293
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 141/307 (45%), Gaps = 44/307 (14%)
Query: 72 HFNVNRILGQGGQGTVYKGR---LED--GRIIAVKKSKLAVDDEELYKLEEFINEIFILS 126
H + LG+G G+V R L+D G ++AVKK + + ++ L +F EI IL
Sbjct: 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 97
Query: 127 QINHRNVVKLLGCCLET--EFPLLVYEFIPNGTLYQHLHDRHQNEEYP--LTWEMRFRVA 182
+ H N+VK G C L+ E++P G+L +L + ++ L + +
Sbjct: 98 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 157
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
+E G Y+H RD+ + NIL++ R K+ DFG +K + D+ K G
Sbjct: 158 MEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 208
Query: 243 T---FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH 299
F Y PE S+ + SDV+SFGVVL EL T +++ S A F+
Sbjct: 209 ESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMR 257
Query: 300 SMRKNRLYHILDDQVMKLGKKNQIVAFAN--------LAERCLDLNGKKRPTMEEVSMEL 351
+ ++ ++ +++L K N + + + C + N +RP+ ++++ +
Sbjct: 258 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 317
Query: 352 NGIRGSI 358
+ IR +
Sbjct: 318 DQIRDQM 324
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 115/232 (49%), Gaps = 14/232 (6%)
Query: 54 VIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAV----DD 109
++ ++ E + A ++R LGQG G VY+G + G + ++++A+ +
Sbjct: 1 MVSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA 59
Query: 110 EELYKLEEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHD-RHQN 168
+ + EF+NE ++ + N +VV+LLG + + L++ E + G L +L R +
Sbjct: 60 ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEM 119
Query: 169 EEYPL----TWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFG 224
E P+ + ++A E+A +AYL++ HRD+ + N ++ E + K+ DFG
Sbjct: 120 ENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFG 176
Query: 225 TSKFI-AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 275
++ I D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 177 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 115/232 (49%), Gaps = 14/232 (6%)
Query: 54 VIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAV----DD 109
++ ++ E + A ++R LGQG G VY+G + G + ++++A+ +
Sbjct: 1 MVSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEA 59
Query: 110 EELYKLEEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHD-RHQN 168
+ + EF+NE ++ + N +VV+LLG + + L++ E + G L +L R +
Sbjct: 60 ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEM 119
Query: 169 EEYPL----TWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFG 224
E P+ + ++A E+A +AYL++ HRD+ + N ++ E + K+ DFG
Sbjct: 120 ENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFG 176
Query: 225 TSKFI-AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 275
++ I D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 177 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 117/243 (48%), Gaps = 25/243 (10%)
Query: 50 YDGSVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGR----IIAVKKSKL 105
+ G I+ KE ++F V R LG G G V + ++G I +KKS+
Sbjct: 16 FQGIAINPGMYVRKKEGKIGESYFKV-RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQF 74
Query: 106 -----AVDDEELYKL-EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLY 159
+ D++ + K EE NEI +L ++H N++KL + ++ LV EF G L+
Sbjct: 75 DKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELF 134
Query: 160 QHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDER---Y 216
+ + +RH+ +E M+ ++ + YLH I HRDIK NILL+ +
Sbjct: 135 EQIINRHKFDECDAANIMK-----QILSGICYLH---KHNIVHRDIKPENILLENKNSLL 186
Query: 217 RAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTG 276
K+ DFG S F + D + GT Y+ PE + + +K DV+S GV++ LL G
Sbjct: 187 NIKIVDFGLSSFFSKD--YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCG 243
Query: 277 KKP 279
P
Sbjct: 244 YPP 246
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 141/307 (45%), Gaps = 44/307 (14%)
Query: 72 HFNVNRILGQGGQGTVYKGR---LED--GRIIAVKKSKLAVDDEELYKLEEFINEIFILS 126
H + LG+G G+V R L+D G ++AVKK + + ++ L +F EI IL
Sbjct: 9 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 64
Query: 127 QINHRNVVKLLGCCLET--EFPLLVYEFIPNGTLYQHLHDRHQNEEYP--LTWEMRFRVA 182
+ H N+VK G C L+ E++P G+L +L + ++ L + +
Sbjct: 65 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 124
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
+E G Y+H RD+ + NIL++ R K+ DFG +K + D+ K G
Sbjct: 125 MEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 175
Query: 243 T---FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH 299
F Y PE S+ + SDV+SFGVVL EL T +++ S A F+
Sbjct: 176 ESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMR 224
Query: 300 SMRKNRLYHILDDQVMKLGKKNQIVAFAN--------LAERCLDLNGKKRPTMEEVSMEL 351
+ ++ ++ +++L K N + + + C + N +RP+ ++++ +
Sbjct: 225 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 284
Query: 352 NGIRGSI 358
+ IR +
Sbjct: 285 DQIRDQM 291
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 111/235 (47%), Gaps = 44/235 (18%)
Query: 78 ILGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL 136
+LGQG G V K R D R A+KK + EE KL ++E+ +L+ +NH+ VV+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIR---HTEE--KLSTILSEVMLLASLNHQYVVRY 67
Query: 137 LGCCLETEF---PL----------LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAI 183
LE P+ + E+ NGTLY +H + N++ W + FR +
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL-FRQIL 126
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-------FIAMDQTHV 236
E AL+Y+HS I HRD+K NI +DE K+ DFG +K + +D ++
Sbjct: 127 E---ALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 237 T------TKIQGTFGYLDPE-YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTG 284
T GT Y+ E + +K D+YS G++ E++ FSTG
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP----FSTG 231
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 142/307 (46%), Gaps = 44/307 (14%)
Query: 72 HFNVNRILGQGGQGTVYKGR---LED--GRIIAVKKSKLAVDDEELYKLEEFINEIFILS 126
H + LG+G G+V R L+D G ++AVKK + + ++ L +F EI IL
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 69
Query: 127 QINHRNVVKLLGCCLET--EFPLLVYEFIPNGTLYQHLHDRHQNEEYP--LTWEMRFRVA 182
+ H N+VK G C L+ E++P G+L +L + ++ L + +
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKG 129
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
+E G Y+H RD+ + NIL++ R K+ DFG +K + D+ K G
Sbjct: 130 MEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 243 T---FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH 299
F Y PE S+ + SDV+SFGVVL EL T +++ S A F+
Sbjct: 181 ESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMR 229
Query: 300 SMRKNRLYHILDDQVMKLGKKNQIVAFAN--------LAERCLDLNGKKRPTMEEVSMEL 351
+ ++ ++ +++L K N + + + C + N +RP+ ++++ +
Sbjct: 230 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 289
Query: 352 NGIRGSI 358
+ IR ++
Sbjct: 290 DQIRDNM 296
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 118/232 (50%), Gaps = 27/232 (11%)
Query: 71 NHFNVNRILGQGGQGTVY---KGRLEDGRII----AVKKSKLAVDDEELYKLEEFINEIF 123
+ F + ++LGQG G V+ K D R + +KK+ L V D K+E I
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI---- 79
Query: 124 ILSQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWE-MRFRV 181
L ++NH +VKL +TE L L+ +F+ G L+ L ++E T E ++F +
Sbjct: 80 -LVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFTEEDVKFYL 132
Query: 182 AIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 241
A E+A AL +LHS I +RD+K NILLDE K+ DFG SK ++D
Sbjct: 133 A-ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFC 187
Query: 242 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 293
GT Y+ PE T +D +SFGV++ E+LTG P G +E +++
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF--QGKDRKETMTM 237
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 14/226 (6%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAV----DDEELYKL 115
++ E + A ++R LGQG G VY+G + G + ++++A+ + + +
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 66
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHD-RHQNEEYPL- 173
EF+NE ++ + N +VV+LLG + + L++ E + G L +L R + E P+
Sbjct: 67 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 174 ---TWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI- 229
+ ++A E+A +AYL++ HRD+ + N ++ E + K+ DFG ++ I
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 183
Query: 230 AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 275
D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 184 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 118/232 (50%), Gaps = 27/232 (11%)
Query: 71 NHFNVNRILGQGGQGTVY---KGRLEDGRII----AVKKSKLAVDDEELYKLEEFINEIF 123
+ F + ++LGQG G V+ K D R + +KK+ L V D K+E I
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI---- 80
Query: 124 ILSQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWE-MRFRV 181
L ++NH +VKL +TE L L+ +F+ G L+ L ++E T E ++F +
Sbjct: 81 -LVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFTEEDVKFYL 133
Query: 182 AIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 241
A E+A AL +LHS I +RD+K NILLDE K+ DFG SK ++D
Sbjct: 134 A-ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFC 188
Query: 242 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 293
GT Y+ PE T +D +SFGV++ E+LTG P G +E +++
Sbjct: 189 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF--QGKDRKETMTM 238
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 143/307 (46%), Gaps = 44/307 (14%)
Query: 72 HFNVNRILGQGGQGTVYKGR---LED--GRIIAVKKSKLAVDDEELYKLEEFINEIFILS 126
H + LG+G G+V R L+D G ++AVKK + + ++ L +F EI IL
Sbjct: 12 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH----LRDFEREIEILK 67
Query: 127 QINHRNVVKLLGCCLET--EFPLLVYEFIPNGTLYQHLHDRHQNEEYP--LTWEMRFRVA 182
+ H N+VK G C L+ E++P G+L +L + ++ L + +
Sbjct: 68 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 127
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
+E G Y+H R++ + NIL++ R K+ DFG +K + D+ + K G
Sbjct: 128 MEYLGTKRYIH---------RNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPG 178
Query: 243 T---FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH 299
F Y PE S+ + SDV+SFGVVL EL T +++ S A F+
Sbjct: 179 ESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT----------YIEKSKSPPAEFMR 227
Query: 300 SMRKNRLYHILDDQVMKLGKKNQIVAFAN--------LAERCLDLNGKKRPTMEEVSMEL 351
+ ++ ++ +++L K N + + + C + N +RP+ ++++ +
Sbjct: 228 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 287
Query: 352 NGIRGSI 358
+ IR ++
Sbjct: 288 DQIRDNM 294
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 18/214 (8%)
Query: 73 FNVNRILGQGGQGTVYKGR-LEDGRIIAVK--KSKLAVDDEELYKLEEFINEIFILSQIN 129
F + R LG G G V+ R +GR A+K K ++ V L ++E +E +LS +
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV---RLKQVEHTNDERLMLSIVT 64
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
H ++++ G + + ++ ++I G L+ L + Q P+ +F A EV AL
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR-KSQRFPNPVA---KFYAA-EVCLAL 119
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDP 249
YLHS I +RD+K NILLD+ K+ DFG +K++ VT + GT Y+ P
Sbjct: 120 EYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVP----DVTYXLCGTPDYIAP 172
Query: 250 EYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFST 283
E + D +SFG+++ E+L G P + +
Sbjct: 173 EVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS 206
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 118/232 (50%), Gaps = 27/232 (11%)
Query: 71 NHFNVNRILGQGGQGTVY---KGRLEDGRII----AVKKSKLAVDDEELYKLEEFINEIF 123
+ F + ++LGQG G V+ K D R + +KK+ L V D K+E I
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI---- 79
Query: 124 ILSQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWE-MRFRV 181
L ++NH +VKL +TE L L+ +F+ G L+ L ++E T E ++F +
Sbjct: 80 -LVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFTEEDVKFYL 132
Query: 182 AIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 241
A E+A AL +LHS I +RD+K NILLDE K+ DFG SK ++D
Sbjct: 133 A-ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFC 187
Query: 242 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 293
GT Y+ PE T +D +SFGV++ E+LTG P G +E +++
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF--QGKDRKETMTM 237
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 14/226 (6%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAV----DDEELYKL 115
++ E + A ++R LGQG G VY+G + G + ++++A+ + + +
Sbjct: 36 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 94
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHD-RHQNEEYPL- 173
EF+NE ++ + N +VV+LLG + + L++ E + G L +L R + E P+
Sbjct: 95 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 154
Query: 174 ---TWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI- 229
+ ++A E+A +AYL++ HRD+ + N ++ E + K+ DFG ++ I
Sbjct: 155 APPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 211
Query: 230 AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 275
D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 212 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 107/214 (50%), Gaps = 17/214 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G V G+ +A+K K E+ EFI E ++ ++H +V+L G
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-----EFIEEAKVMMNLSHEKLVQLYG 66
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHD-RHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
C + ++ E++ NG L +L + RH+ + L + +V A+ YL S
Sbjct: 67 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE---S 118
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L++++ KV+DFG S+++ D+ + + + PE S+
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 178
Query: 258 TDKSDVYSFGVVLVELLT-GKKPI--FSTGNTSQ 288
+ KSD+++FGV++ E+ + GK P F+ T++
Sbjct: 179 SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 212
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 107/214 (50%), Gaps = 17/214 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G V G+ +A+K K E+ EFI E ++ ++H +V+L G
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-----EFIEEAKVMMNLSHEKLVQLYG 71
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHD-RHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
C + ++ E++ NG L +L + RH+ + L + +V A+ YL S
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE---S 123
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L++++ KV+DFG S+++ D+ + + + PE S+
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 183
Query: 258 TDKSDVYSFGVVLVELLT-GKKPI--FSTGNTSQ 288
+ KSD+++FGV++ E+ + GK P F+ T++
Sbjct: 184 SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 217
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 114/239 (47%), Gaps = 23/239 (9%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G V G+ +A+K K E+ EFI E ++ ++H +V+L G
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-----EFIEEAKVMMNLSHEKLVQLYG 86
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHD-RHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
C + ++ E++ NG L +L + RH+ + L + +V A+ YL S
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLES--- 138
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L++++ KV+DFG S+++ D+ + + + PE S+
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKF 198
Query: 258 TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLY--HILDDQV 314
+ KSD+++FGV++ E I+S G E + + H + RLY H+ ++V
Sbjct: 199 SSKSDIWAFGVLMWE-------IYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKV 250
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 107/214 (50%), Gaps = 17/214 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G V G+ +A+K K E+ EFI E ++ ++H +V+L G
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-----EFIEEAKVMMNLSHEKLVQLYG 70
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHD-RHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
C + ++ E++ NG L +L + RH+ + L + +V A+ YL S
Sbjct: 71 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE---S 122
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L++++ KV+DFG S+++ D+ + + + PE S+
Sbjct: 123 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 182
Query: 258 TDKSDVYSFGVVLVELLT-GKKPI--FSTGNTSQ 288
+ KSD+++FGV++ E+ + GK P F+ T++
Sbjct: 183 SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 216
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 113/226 (50%), Gaps = 14/226 (6%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAV----DDEELYKL 115
++ E + A ++R LGQG G VY+G + G + ++++A+ + + +
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 72
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHD-RHQNEEYPL- 173
EF+NE ++ + N +VV+LLG + + L++ E + G L +L R + E P+
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 132
Query: 174 ---TWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI- 229
+ ++A E+A +AYL++ HRD+ + N ++ E + K+ DFG ++ I
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 230 AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 275
D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 190 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 115/234 (49%), Gaps = 22/234 (9%)
Query: 52 GSVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAV---- 107
GSV D E + A ++R LGQG G VY+G + G + ++++A+
Sbjct: 1 GSVPD--------EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVN 51
Query: 108 DDEELYKLEEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHD-RH 166
+ + + EF+NE ++ + N +VV+LLG + + L++ E + G L +L R
Sbjct: 52 EAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRP 111
Query: 167 QNEEYPL----TWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVAD 222
+ E P+ + ++A E+A +AYL++ HRD+ + N ++ E + K+ D
Sbjct: 112 EMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGD 168
Query: 223 FGTSKFI-AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 275
FG ++ I D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 169 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 107/214 (50%), Gaps = 17/214 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G V G+ +A+K K E+ EFI E ++ ++H +V+L G
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-----EFIEEAKVMMNLSHEKLVQLYG 77
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHD-RHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
C + ++ E++ NG L +L + RH+ + L + +V A+ YL S
Sbjct: 78 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE---S 129
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L++++ KV+DFG S+++ D+ + + + PE S+
Sbjct: 130 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 189
Query: 258 TDKSDVYSFGVVLVELLT-GKKPI--FSTGNTSQ 288
+ KSD+++FGV++ E+ + GK P F+ T++
Sbjct: 190 SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 223
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 116/234 (49%), Gaps = 27/234 (11%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLE-DGR---IIAVKKSKLAVDDEELYKLEEF 118
+KE+D + + +++G G G V GRL+ G+ +A+K K D++ +F
Sbjct: 23 AKEIDASC--IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR---RDF 77
Query: 119 INEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMR 178
++E I+ Q +H N++ L G + + +++ E++ NG+L L + R
Sbjct: 78 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN----------DGR 127
Query: 179 FRVAIEVAGALAYLHSG----ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 234
F V I++ G L + SG + HRD+ + NIL++ KV+DFG S+ + D
Sbjct: 128 FTV-IQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE 186
Query: 235 HVTTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
T G + PE + T SDV+S+G+V+ E+++ G++P + N
Sbjct: 187 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 240
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 116/234 (49%), Gaps = 27/234 (11%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLE-DGR---IIAVKKSKLAVDDEELYKLEEF 118
+KE+D + + +++G G G V GRL+ G+ +A+K K D++ +F
Sbjct: 8 AKEIDASC--IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR---RDF 62
Query: 119 INEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMR 178
++E I+ Q +H N++ L G + + +++ E++ NG+L L + R
Sbjct: 63 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN----------DGR 112
Query: 179 FRVAIEVAGALAYLHSG----ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 234
F V I++ G L + SG + HRD+ + NIL++ KV+DFG S+ + D
Sbjct: 113 FTV-IQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE 171
Query: 235 HVTTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
T G + PE + T SDV+S+G+V+ E+++ G++P + N
Sbjct: 172 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 225
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 114/239 (47%), Gaps = 23/239 (9%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G V G+ +A+K K E+ EFI E ++ ++H +V+L G
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-----EFIEEAKVMMNLSHEKLVQLYG 86
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHD-RHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
C + ++ E++ NG L +L + RH+ + L + +V A+ YL S
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE---S 138
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L++++ KV+DFG S+++ D+ + + + PE S+
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 198
Query: 258 TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLY--HILDDQV 314
+ KSD+++FGV++ E I+S G E + + H + RLY H+ ++V
Sbjct: 199 SSKSDIWAFGVLMWE-------IYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKV 250
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 116/234 (49%), Gaps = 27/234 (11%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLE-DGR---IIAVKKSKLAVDDEELYKLEEF 118
+KE+D + + +++G G G V GRL+ G+ +A+K K D++ +F
Sbjct: 2 AKEIDASC--IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR---RDF 56
Query: 119 INEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMR 178
++E I+ Q +H N++ L G + + +++ E++ NG+L L + R
Sbjct: 57 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN----------DGR 106
Query: 179 FRVAIEVAGALAYLHSG----ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 234
F V I++ G L + SG + HRD+ + NIL++ KV+DFG S+ + D
Sbjct: 107 FTV-IQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE 165
Query: 235 HVTTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
T G + PE + T SDV+S+G+V+ E+++ G++P + N
Sbjct: 166 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 219
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 107/214 (50%), Gaps = 17/214 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G V G+ +A+K K E+ EFI E ++ ++H +V+L G
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-----EFIEEAKVMMNLSHEKLVQLYG 71
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHD-RHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
C + ++ E++ NG L +L + RH+ + L + +V A+ YL S
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE---S 123
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L++++ KV+DFG S+++ D+ + + + PE S+
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKF 183
Query: 258 TDKSDVYSFGVVLVELLT-GKKPI--FSTGNTSQ 288
+ KSD+++FGV++ E+ + GK P F+ T++
Sbjct: 184 SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 217
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 127/271 (46%), Gaps = 33/271 (12%)
Query: 79 LGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+GQG GTVY + G+ +A+++ L ++ K E INEI ++ + + N+V L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNL----QQQPKKELIINEILVMRENKNPNIVNYL 84
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
L + +V E++ G+L + + +E V E AL +LHS
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG------QIAAVCRECLQALEFLHSNQ- 137
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
+ HR+IKS NILL K+ DFG I +Q+ +T + GT ++ PE
Sbjct: 138 --VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAY 194
Query: 258 TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDDQVMKL 317
K D++S G++ +E++ G+ P + EN A LY I + +L
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLN------ENPLRA-----------LYLIATNGTPEL 237
Query: 318 GKKNQIVA-FANLAERCLDLNGKKRPTMEEV 347
++ A F + RCL+++ +KR + +E+
Sbjct: 238 QNPEKLSAIFRDFLNRCLEMDVEKRGSAKEL 268
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 126/271 (46%), Gaps = 33/271 (12%)
Query: 79 LGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+GQG GTVY + G+ +A+++ L ++ K E INEI ++ + + N+V L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNL----QQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
L + +V E++ G+L + + +E V E AL +LHS
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG------QIAAVCRECLQALEFLHSNQ- 136
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
+ HRDIKS NILL K+ DFG I +Q+ + + GT ++ PE
Sbjct: 137 --VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAY 193
Query: 258 TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDDQVMKL 317
K D++S G++ +E++ G+ P + EN A LY I + +L
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLN------ENPLRA-----------LYLIATNGTPEL 236
Query: 318 GKKNQIVA-FANLAERCLDLNGKKRPTMEEV 347
++ A F + RCL+++ +KR + +E+
Sbjct: 237 QNPEKLSAIFRDFLNRCLEMDVEKRGSAKEL 267
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 126/271 (46%), Gaps = 33/271 (12%)
Query: 79 LGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+GQG GTVY + G+ +A+++ L ++ K E INEI ++ + + N+V L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNL----QQQPKKELIINEILVMRENKNPNIVNYL 84
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
L + +V E++ G+L + + +E V E AL +LHS
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQALEFLHSNQ- 137
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
+ HRDIKS NILL K+ DFG I +Q+ + + GT ++ PE
Sbjct: 138 --VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAY 194
Query: 258 TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDDQVMKL 317
K D++S G++ +E++ G+ P + EN A LY I + +L
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLN------ENPLRA-----------LYLIATNGTPEL 237
Query: 318 GKKNQIVA-FANLAERCLDLNGKKRPTMEEV 347
++ A F + RCL+++ +KR + +E+
Sbjct: 238 QNPEKLSAIFRDFLNRCLEMDVEKRGSAKEL 268
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 122/281 (43%), Gaps = 33/281 (11%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G V+ GRL D ++AVK + + + K F+ E IL Q +H N+V+L+
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK---FLQEARILKQYSHPNIVRLI 178
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G C + + +V E + G L + E L + ++ + A + YL S
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFL----RTEGARLRVKTLLQMVGDAAAGMEYLESKCC 234
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKI-QGTFGYLDPEYHQSSQ 256
HRD+ + N L+ E+ K++DFG S+ A + + Q + PE +
Sbjct: 235 ---IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGR 291
Query: 257 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS--LAAYFVHSMRKNRLYHILDDQV 314
+ +SDV+SFG++L E FS G + N+S FV + + D V
Sbjct: 292 YSSESDVWSFGILLWE-------TFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAV 344
Query: 315 MKLGKKNQIVAFANLAERCLDLNGKKRPTMEEVSMELNGIR 355
+ L E+C +RP+ + EL IR
Sbjct: 345 FR------------LMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 124/271 (45%), Gaps = 33/271 (12%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G V R + GR +AVK +D + + E NE+ I+ H NVV++
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVK----MMDLRKQQRRELLFNEVVIMRDYQHFNVVEMY 108
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
L E ++ EF+ G L + NEE T V V ALAYLH+
Sbjct: 109 KSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIAT------VCEAVLQALAYLHAQG- 161
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
+ HRDIKS +ILL R K++DFG I+ D + GT ++ PE S
Sbjct: 162 --VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK-RKXLVGTPYWMAPEVISRSLY 218
Query: 258 TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDDQVMKL 317
+ D++S G++++E++ G+ P FS V +M++ R D KL
Sbjct: 219 ATEVDIWSLGIMVIEMVDGEPPYFSDSP------------VQAMKRLR-----DSPPPKL 261
Query: 318 GKKNQI-VAFANLAERCLDLNGKKRPTMEEV 347
+++ + ER L + ++R T +E+
Sbjct: 262 KNSHKVSPVLRDFLERMLVRDPQERATAQEL 292
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 112/226 (49%), Gaps = 14/226 (6%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAV----DDEELYKL 115
++ E + A ++R LGQG G VY+G + G + ++++A+ + + +
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 59
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHD-RHQNEEYPL- 173
EF+NE ++ + N +VV+LLG + + L++ E + G L +L R + E P+
Sbjct: 60 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 174 ---TWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI- 229
+ ++A E+A +AYL++ HRD+ + N + E + K+ DFG ++ I
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTRDIY 176
Query: 230 AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 275
D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 177 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 125/298 (41%), Gaps = 31/298 (10%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAV----DDEELYKL 115
+F E + + + R LGQG G VY+G D I ++++AV + L +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARD-IIKGEAETRVAVKTVNESASLRER 64
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEE----- 170
EF+NE ++ +VV+LLG + + L+V E + +G L +L E
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 171 YPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA 230
P T + ++A E+A +AYL++ HRD+ + N ++ + K+ DFG ++ I
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIX 181
Query: 231 -MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
D K ++ PE + T SD++SFGVVL E+
Sbjct: 182 ETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI---------------- 225
Query: 290 NVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
SLA + ++ + D N +L C N K RPT E+
Sbjct: 226 -TSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEI 282
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 125/298 (41%), Gaps = 31/298 (10%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAV----DDEELYKL 115
+F E + + + R LGQG G VY+G D I ++++AV + L +
Sbjct: 3 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARD-IIKGEAETRVAVKTVNESASLRER 61
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEE----- 170
EF+NE ++ +VV+LLG + + L+V E + +G L +L E
Sbjct: 62 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 121
Query: 171 YPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA 230
P T + ++A E+A +AYL++ HRD+ + N ++ + K+ DFG ++ I
Sbjct: 122 PPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIX 178
Query: 231 -MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
D K ++ PE + T SD++SFGVVL E+
Sbjct: 179 ETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI---------------- 222
Query: 290 NVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
SLA + ++ + D N +L C N K RPT E+
Sbjct: 223 -TSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEI 279
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 122/281 (43%), Gaps = 33/281 (11%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G V+ GRL D ++AVK + + + K F+ E IL Q +H N+V+L+
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK---FLQEARILKQYSHPNIVRLI 178
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G C + + +V E + G L + E L + ++ + A + YL S
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFL----RTEGARLRVKTLLQMVGDAAAGMEYLESKCC 234
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKI-QGTFGYLDPEYHQSSQ 256
HRD+ + N L+ E+ K++DFG S+ A + + Q + PE +
Sbjct: 235 ---IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGR 291
Query: 257 LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS--LAAYFVHSMRKNRLYHILDDQV 314
+ +SDV+SFG++L E FS G + N+S FV + + D V
Sbjct: 292 YSSESDVWSFGILLWE-------TFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAV 344
Query: 315 MKLGKKNQIVAFANLAERCLDLNGKKRPTMEEVSMELNGIR 355
+ L E+C +RP+ + EL IR
Sbjct: 345 FR------------LMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 114/222 (51%), Gaps = 26/222 (11%)
Query: 76 NRILGQGGQGTVYKGRLEDGR-----IIAVKKSKLAVDDEELYKLEEFINEIFILSQINH 130
+++G G G VYKG L+ +A+K K +++ +F+ E I+ Q +H
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV---DFLGEAGIMGQFSH 105
Query: 131 RNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALA 190
N+++L G + + +++ E++ NG L + L R ++ E+ + +++ G L
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFL--REKDGEFSV---------LQLVGMLR 154
Query: 191 YLHSG----ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ--THVTTKIQGTF 244
+ +G A+ HRD+ + NIL++ KV+DFG S+ + D T+ T+ +
Sbjct: 155 GIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPI 214
Query: 245 GYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
+ PE + T SDV+SFG+V+ E++T G++P + N
Sbjct: 215 RWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN 256
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 125/280 (44%), Gaps = 35/280 (12%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G V G+ + +AVK K E+ EF E + +++H +VK G
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSED-----EFFQEAQTMMKLSHPKLVKFYG 70
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
C E+P+ +V E+I NG L +L + E EM + +V +A+L S
Sbjct: 71 VC-SKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCY----DVCEGMAFLESHQ- 124
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + N L+D KV+DFG ++++ DQ + + + PE +
Sbjct: 125 --FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKY 182
Query: 258 TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLY--HILDDQVM 315
+ KSDV++FG+++ E +FS G + + + + + +RLY H+ D +
Sbjct: 183 SSKSDVWAFGILMWE-------VFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIY 235
Query: 316 KLGKKNQIVAFANLAERCLDLNGKKRPTMEEVSMELNGIR 355
+ + C +KRPT +++ + +R
Sbjct: 236 Q------------IMYSCWHELPEKRPTFQQLLSSIEPLR 263
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 21/209 (10%)
Query: 77 RILGQGGQGTVYKGRLED-----GRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHR 131
R LG+G G V R + G +AVK K + L++ EI IL + H
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKK---EIEILRNLYHE 83
Query: 132 NVVKLLGCCLET--EFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
N+VK G C E L+ EF+P+G+L ++L +++N+ + + + + A+++ +
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNK---INLKQQLKYAVQICKGM 139
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK---IQGTFGY 246
YL S HRD+ + N+L++ ++ K+ DFG +K I D+ T K F Y
Sbjct: 140 DYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY 196
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLT 275
PE S+ SDV+SFGV L ELLT
Sbjct: 197 A-PECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 23/210 (10%)
Query: 79 LGQGGQGTVYKG--RLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVK 135
LG G G+V +G R+ +I +A+K K + + EE + E I+ Q+++ +V+
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADT---EEMMREAQIMHQLDNPYIVR 74
Query: 136 LLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAI---EVAGALAYL 192
L+G C + E +LV E G L++ L + EE P++ VA +V+ + YL
Sbjct: 75 LIGVC-QAEALMLVMEMAGGGPLHKFLVGKR--EEIPVS-----NVAELLHQVSMGMKYL 126
Query: 193 HSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPE 250
HRD+ + N+LL R+ AK++DFG SK + D ++ T + G + + PE
Sbjct: 127 EE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE 183
Query: 251 YHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + +SDV+S+GV + E L+ G+KP
Sbjct: 184 CINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 21/209 (10%)
Query: 77 RILGQGGQGTVYKGRLED-----GRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHR 131
R LG+G G V R + G +AVK K + L++ EI IL + H
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKK---EIEILRNLYHE 71
Query: 132 NVVKLLGCCLET--EFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
N+VK G C E L+ EF+P+G+L ++L +++N+ + + + + A+++ +
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNK---INLKQQLKYAVQICKGM 127
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK---IQGTFGY 246
YL S HRD+ + N+L++ ++ K+ DFG +K I D+ T K F Y
Sbjct: 128 DYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY 184
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLT 275
PE S+ SDV+SFGV L ELLT
Sbjct: 185 A-PECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 73 FNVNRILGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHR 131
F+V LG+G G+VYK E G+I+A+K+ + D L+E I EI I+ Q +
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD------LQEIIKEISIMQQCDSP 84
Query: 132 NVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAY 191
+VVK G + +V E+ G++ + R++ LT + + L Y
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT----LTEDEIATILQSTLKGLEY 140
Query: 192 LHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY 251
LH HRDIK+ NILL+ AK+ADFG + + D + GT ++ PE
Sbjct: 141 LHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLT-DXMAKRNXVIGTPFWMAPEV 196
Query: 252 HQSSQLTDKSDVYSFGVVLVELLTGKKP 279
Q +D++S G+ +E+ GK P
Sbjct: 197 IQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 119/237 (50%), Gaps = 31/237 (13%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLE-DGR---IIAVKKSKLAVDDEELYKLEEF 118
+KE+D ++ + ++G G G V +GRL+ G+ +A+K K + + EF
Sbjct: 8 AKEID--VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR---REF 62
Query: 119 INEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMR 178
++E I+ Q H N+++L G + +++ EF+ NG L L R + ++
Sbjct: 63 LSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL--RLNDGQF------- 113
Query: 179 FRVAIEVAGALAYLHSG----ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AM 231
I++ G L + SG A HRD+ + NIL++ KV+DFG S+F+ +
Sbjct: 114 --TVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSS 171
Query: 232 DQTHVTTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
D T+ T+ + G + PE + T SD +S+G+V+ E+++ G++P + N
Sbjct: 172 DPTY-TSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN 227
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 125/298 (41%), Gaps = 31/298 (10%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAV----DDEELYKL 115
+F E + + + R LGQG G VY+G D I ++++AV + L +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARD-IIKGEAETRVAVKTVNESASLRER 64
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEE----- 170
EF+NE ++ +VV+LLG + + L+V E + +G L +L E
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 171 YPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI- 229
P T + ++A E+A +AYL++ HRD+ + N ++ + K+ DFG ++ I
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIY 181
Query: 230 AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
D K ++ PE + T SD++SFGVVL E+
Sbjct: 182 ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI---------------- 225
Query: 290 NVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
SLA + ++ + D N +L C N K RPT E+
Sbjct: 226 -TSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEI 282
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 110/235 (46%), Gaps = 44/235 (18%)
Query: 78 ILGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL 136
+LGQG G V K R D R A+KK + EE KL ++E+ +L+ +NH+ VV+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIR---HTEE--KLSTILSEVMLLASLNHQYVVRY 67
Query: 137 LGCCLETEF---PL----------LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAI 183
LE P+ + E+ N TLY +H + N++ W + FR +
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL-FRQIL 126
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-------FIAMDQTHV 236
E AL+Y+HS I HRD+K NI +DE K+ DFG +K + +D ++
Sbjct: 127 E---ALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 237 T------TKIQGTFGYLDPE-YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTG 284
T GT Y+ E + +K D+YS G++ E++ FSTG
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP----FSTG 231
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 14/226 (6%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAV----DDEELYKL 115
++ E + A ++R LGQG G VY+G + G + ++++A+ + + +
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 62
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEE----- 170
EF+NE ++ + N +VV+LLG + + L++ E + G L +L
Sbjct: 63 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 122
Query: 171 YPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI- 229
P + ++A E+A +AYL++ HRD+ + N ++ E + K+ DFG ++ I
Sbjct: 123 APPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 179
Query: 230 AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 275
D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 180 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 103/224 (45%), Gaps = 31/224 (13%)
Query: 73 FNVNRILGQGGQGTVYKGRLEDGR-IIAVK---KSKLAVDDEELYKLEEFINEIFILSQI 128
F++ R LG+G G VY R + + I+A+K KS+L + E + EI I S +
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE----HQLRREIEIQSHL 71
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL--HDRHQNEEYPLTWEMRFRVAIEVA 186
H N++++ + + L+ EF P G LY+ L H R + E E+A
Sbjct: 72 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME-------ELA 124
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT----KIQG 242
AL Y H + HRDIK N+L+ + K+ADFG S H + + G
Sbjct: 125 DALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCG 174
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 286
T YL PE + +K D++ GV+ E L G P S +T
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT 218
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 122/236 (51%), Gaps = 29/236 (12%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLE-DGR---IIAVKKSKLAVDDEELYKLEEF 118
+KE+D + + +++G G G V G L+ G+ +A+K K +++ +F
Sbjct: 27 AKEIDISC--VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR---RDF 81
Query: 119 INEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMR 178
++E I+ Q +H NV+ L G ++ +++ EF+ NG+L L QN+ +
Sbjct: 82 LSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR---QNDG-------Q 131
Query: 179 FRVAIEVAGALAYLHSG----ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 234
F V I++ G L + +G A HRD+ + NIL++ KV+DFG S+F+ D +
Sbjct: 132 FTV-IQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 190
Query: 235 HV--TTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
T+ + G + PE Q + T SDV+S+G+V+ E+++ G++P + N
Sbjct: 191 DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN 246
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 118/261 (45%), Gaps = 31/261 (11%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------RLEDGRIIAVKKSKLAVDDEELYK 114
+ + + + + N+ + LG+G G V + + R +AVK K E
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 115 LEEFINEIFILSQINHR-NVVKLLGCCLETEFPLLV-YEFIPNGTLYQHLHDRHQNEEYP 172
L ++E+ IL I H NVV LLG C + PL+V EF G L +L + +NE P
Sbjct: 77 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK-RNEFVP 132
Query: 173 --------LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFG 224
LT E + +VA + +L AS HRD+ + NILL E+ K+ DFG
Sbjct: 133 YKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFG 189
Query: 225 TSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFST 283
++ I D +V + ++ PE T +SDV+SFGV+L E IFS
Sbjct: 190 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------IFSL 242
Query: 284 GNTSQENVSLAAYFVHSMRKN 304
G + V + F +++
Sbjct: 243 GASPYPGVKIDEEFCRRLKEG 263
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 103/224 (45%), Gaps = 31/224 (13%)
Query: 73 FNVNRILGQGGQGTVYKGRLEDGR-IIAVK---KSKLAVDDEELYKLEEFINEIFILSQI 128
F++ R LG+G G VY R + + I+A+K KS+L + E + EI I S +
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE----HQLRREIEIQSHL 72
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL--HDRHQNEEYPLTWEMRFRVAIEVA 186
H N++++ + + L+ EF P G LY+ L H R + E E+A
Sbjct: 73 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME-------ELA 125
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT----KIQG 242
AL Y H + HRDIK N+L+ + K+ADFG S H + + G
Sbjct: 126 DALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCG 175
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 286
T YL PE + +K D++ GV+ E L G P S +T
Sbjct: 176 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT 219
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++LG G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 74
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L++ + +P G L ++ + N +Y L W
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 127
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 128 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 184
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 185 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 14/226 (6%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAV----DDEELYKL 115
++ E + A ++R LGQG G VY+G + G + ++++A+ + + +
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 72
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEE----- 170
EF+NE ++ + N +VV+LLG + + L++ E + G L +L
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 132
Query: 171 YPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI- 229
P + ++A E+A +AYL++ HRD+ + N ++ E + K+ DFG ++ I
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 230 AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 275
D K ++ PE + T SDV+SFGVVL E+ T
Sbjct: 190 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 118/261 (45%), Gaps = 31/261 (11%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------RLEDGRIIAVKKSKLAVDDEELYK 114
+ + + + + N+ + LG+G G V + + R +AVK K E
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 115 LEEFINEIFILSQINHR-NVVKLLGCCLETEFPLLV-YEFIPNGTLYQHLHDRHQNEEYP 172
L ++E+ IL I H NVV LLG C + PL+V EF G L +L + +NE P
Sbjct: 77 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK-RNEFVP 132
Query: 173 --------LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFG 224
LT E + +VA + +L AS HRD+ + NILL E+ K+ DFG
Sbjct: 133 YKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFG 189
Query: 225 TSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFST 283
++ I D +V + ++ PE T +SDV+SFGV+L E IFS
Sbjct: 190 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------IFSL 242
Query: 284 GNTSQENVSLAAYFVHSMRKN 304
G + V + F +++
Sbjct: 243 GASPYPGVKIDEEFXRRLKEG 263
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++LG G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L++ + +P G L ++ + N +Y L W
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 125
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 126 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 183 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++LG G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L++ + +P G L ++ + N +Y L W
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 125
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 126 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 183 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++LG G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L++ + +P G L ++ + N +Y L W
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 126
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 127 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 184 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++LG G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L++ + +P G L ++ + N +Y L W
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 125
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 126 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 183 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++LG G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 71
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L++ + +P G L ++ + N +Y L W
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 124
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 125 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 182 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++LG G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L++ + +P G L ++ + N +Y L W
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 123
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 124 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 181 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 127/299 (42%), Gaps = 33/299 (11%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAV----DDEELYKL 115
+F E + + + R LGQG G VY+G D I ++++AV + L +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARD-IIKGEAETRVAVKTVNESASLRER 64
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEE----- 170
EF+NE ++ +VV+LLG + + L+V E + +G L +L E
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 171 YPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA 230
P T + ++A E+A +AYL++ HRD+ + N ++ + K+ DFG ++ I
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDI- 180
Query: 231 MDQTHVTTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ + +G ++ PE + T SD++SFGVVL E+
Sbjct: 181 YETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI--------------- 225
Query: 289 ENVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
SLA + ++ + D N +L C N K RPT E+
Sbjct: 226 --TSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEI 282
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 110/217 (50%), Gaps = 20/217 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKL-EEFINEIFILSQI 128
F ++LG G GTVYKG + +G + + + + + + K +E ++E ++++ +
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVAIEVA 186
++ +V +LLG CL T L+ + +P G L ++ + N +Y L W +++A
Sbjct: 109 DNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 161
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---KIQGT 243
+ YL + HRD+ + N+L+ K+ DFG +K + ++ K+
Sbjct: 162 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 218
Query: 244 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 219 WMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 253
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++LG G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 74
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L++ + +P G L ++ + N +Y L W
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 127
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 128 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 184
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 185 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 118/237 (49%), Gaps = 31/237 (13%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLE-DGR---IIAVKKSKLAVDDEELYKLEEF 118
+KE+D ++ + ++G G G V +GRL+ G+ +A+K K + + EF
Sbjct: 10 AKEID--VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR---REF 64
Query: 119 INEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMR 178
++E I+ Q H N+++L G + +++ EF+ NG L L R + ++
Sbjct: 65 LSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL--RLNDGQF------- 115
Query: 179 FRVAIEVAGALAYLHSG----ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AM 231
I++ G L + SG A HRD+ + NIL++ KV+DFG S+F+ +
Sbjct: 116 --TVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSS 173
Query: 232 DQTHVTTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
D T T+ + G + PE + T SD +S+G+V+ E+++ G++P + N
Sbjct: 174 DPTE-TSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN 229
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 110/221 (49%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++LG G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 80
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L+ + +P G L ++ + N +Y L W
Sbjct: 81 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 133
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 134 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 190
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 191 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 229
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++LG G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 71
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L++ + +P G L ++ + N +Y L W
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNW------C 124
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 125 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 182 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 110/221 (49%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++LG G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L+ + +P G L ++ + N +Y L W
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 130
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 131 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 188 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 110/221 (49%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++LG G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L+ + +P G L ++ + N +Y L W
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 123
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 124 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 181 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 110/221 (49%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++LG G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L+ + +P G L ++ + N +Y L W
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 125
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 126 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 183 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 110/221 (49%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++LG G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 64
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L+ + +P G L ++ + N +Y L W
Sbjct: 65 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 117
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 118 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 174
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 175 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 213
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 110/221 (49%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++LG G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L+ + +P G L ++ + N +Y L W
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 126
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 127 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 184 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 110/221 (49%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++LG G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL T L+ + +P G L ++ + N +Y L W
Sbjct: 78 MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------C 130
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 131 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 187
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 188 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 110/221 (49%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++LG G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L+ + +P G L ++ + N +Y L W
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 126
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 127 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 184 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 110/221 (49%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++LG G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L+ + +P G L ++ + N +Y L W
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 125
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 126 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 183 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 110/221 (49%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++LG G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L+ + +P G L ++ + N +Y L W
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 123
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 124 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 180
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 181 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 110/221 (49%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++LG G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L+ + +P G L ++ + N +Y L W
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 126
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 127 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 184 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 110/230 (47%), Gaps = 19/230 (8%)
Query: 73 FNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYK---LEEFINEIFILSQI 128
F V +LG+G VY+ + G +A+K +D + +YK ++ NE+ I Q+
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIK----MIDKKAMYKAGMVQRVQNEVKIHCQL 68
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGA 188
H ++++L ++ + LV E NG + ++L +R + P + ++
Sbjct: 69 KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK----PFSENEARHFMHQIITG 124
Query: 189 LAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD-QTHVTTKIQGTFGYL 247
+ YLHS I HRD+ +N+LL K+ADFG + + M + H T + GT Y+
Sbjct: 125 MLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYI 179
Query: 248 DPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS-TGNTSQENVSLAAY 296
PE S +SDV+S G + LL G+ P + T + V LA Y
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADY 229
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 110/221 (49%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++LG G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 76
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L+ + +P G L ++ + N +Y L W
Sbjct: 77 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 129
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 130 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 186
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 187 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 225
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 110/221 (49%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++LG G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 67
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L+ + +P G L ++ + N +Y L W
Sbjct: 68 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 120
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 121 VQIAEGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 177
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 178 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 216
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 110/221 (49%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++LG G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L+ + +P G L ++ + N +Y L W
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 123
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 124 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 181 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 103/224 (45%), Gaps = 31/224 (13%)
Query: 73 FNVNRILGQGGQGTVYKGRLEDGR-IIAVK---KSKLAVDDEELYKLEEFINEIFILSQI 128
F++ R LG+G G VY R + + I+A+K KS+L + E + EI I S +
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE----HQLRREIEIQSHL 71
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL--HDRHQNEEYPLTWEMRFRVAIEVA 186
H N++++ + + L+ EF P G LY+ L H R + E E+A
Sbjct: 72 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME-------ELA 124
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT----KIQG 242
AL Y H + HRDIK N+L+ + K+ADFG S H + + G
Sbjct: 125 DALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWS-------VHAPSLRRRXMCG 174
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 286
T YL PE + +K D++ GV+ E L G P S +T
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT 218
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 110/221 (49%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++LG G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 95
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L+ + +P G L ++ + N +Y L W
Sbjct: 96 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 148
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 149 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 205
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 206 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 244
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 113/234 (48%), Gaps = 27/234 (11%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRL----EDGRIIAVKKSKLAVDDEELYKLEEF 118
++E++ + H + +I+G G G V GRL + +A+K K + + +F
Sbjct: 43 TREIEASRIH--IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR---RDF 97
Query: 119 INEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMR 178
++E I+ Q +H N+++L G ++V E++ NG+L L R + ++ +
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTI----- 150
Query: 179 FRVAIEVAGALAYLHSG----ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 234
+++ G L + +G + HRD+ + N+L+D KV+DFG S+ + D
Sbjct: 151 ----MQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206
Query: 235 HVTTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
T G + PE + SDV+SFGVV+ E+L G++P ++ N
Sbjct: 207 AAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN 260
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 119/281 (42%), Gaps = 31/281 (11%)
Query: 77 RILGQGGQGTVYKGRLEDGRIIAVKKSKLAV----DDEELYKLEEFINEIFILSQINHRN 132
R LGQG G VY+G D I ++++AV + L + EF+NE ++ +
Sbjct: 22 RELGQGSFGMVYEGNARD-IIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 80
Query: 133 VVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEE-----YPLTWEMRFRVAIEVAG 187
VV+LLG + + L+V E + +G L +L E P T + ++A E+A
Sbjct: 81 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 140
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTHVTTKIQGTFGY 246
+AYL+ + HRD+ + N ++ + K+ DFG ++ I D K +
Sbjct: 141 GMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRL 306
+ PE + T SD++SFGVVL E+ SLA + ++
Sbjct: 198 MAPESLKDGVFTTSSDMWSFGVVLWEI-----------------TSLAEQPYQGLSNEQV 240
Query: 307 YHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ D N +L C N K RPT E+
Sbjct: 241 LKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEI 281
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 110/221 (49%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++LG G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L+ + +P G L ++ + N +Y L W
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNW------C 123
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 124 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 181 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 115/234 (49%), Gaps = 27/234 (11%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRL----EDGRIIAVKKSKLAVDDEELYKLEEF 118
++E++ + H + +I+G G G V GRL + +A+K K + + +F
Sbjct: 43 TREIEASRIH--IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR---RDF 97
Query: 119 INEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMR 178
++E I+ Q +H N+++L G ++V E++ NG+L L R + ++ +
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTI----- 150
Query: 179 FRVAIEVAGALAYLHSG----ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA--MD 232
+++ G L + +G + HRD+ + N+L+D KV+DFG S+ + D
Sbjct: 151 ----MQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206
Query: 233 QTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
+ TT + + PE + SDV+SFGVV+ E+L G++P ++ N
Sbjct: 207 AAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN 260
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 127/291 (43%), Gaps = 34/291 (11%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYK----LEEFINEIFILS 126
+ + + ++G G V A KK K+A+ L K ++E + EI +S
Sbjct: 10 DDYELQEVIGSGATAVV------QAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMS 63
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGT---LYQHLHDRHQNEEYPLTWEMRFRVAI 183
Q +H N+V + + LV + + G+ + +H+ + +++ L +
Sbjct: 64 QCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 123
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 243
EV L YLH HRD+K+ NILL E ++ADFG S F+A K++ T
Sbjct: 124 EVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 180
Query: 244 F----GYLDPEYHQSSQLTD-KSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFV 298
F ++ PE + + D K+D++SFG+ +EL TG P ++L
Sbjct: 181 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTL----- 235
Query: 299 HSMRKNRLYHILDDQVM--KLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
L + D+ M K GK +F + CL + +KRPT E+
Sbjct: 236 -QNDPPSLETGVQDKEMLKKYGK-----SFRKMISLCLQKDPEKRPTAAEL 280
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 117/264 (44%), Gaps = 34/264 (12%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------RLEDGRIIAVKKSKLAVDDEELYK 114
+ + + + + N+ + LG+G G V + + R +AVK K E
Sbjct: 18 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 77
Query: 115 LEEFINEIFILSQINHR-NVVKLLGCCLETEFPLLV-YEFIPNGTLYQHLHDRHQNEEYP 172
L ++E+ IL I H NVV LLG C + PL+V EF G L +L + +NE P
Sbjct: 78 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK-RNEFVP 133
Query: 173 -----------LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVA 221
LT E + +VA + +L AS HRD+ + NILL E+ K+
Sbjct: 134 YKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKIC 190
Query: 222 DFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 280
DFG ++ I D V + ++ PE T +SDV+SFGV+L E I
Sbjct: 191 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------I 243
Query: 281 FSTGNTSQENVSLAAYFVHSMRKN 304
FS G + V + F +++
Sbjct: 244 FSLGASPYPGVKIDEEFCRRLKEG 267
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 127/291 (43%), Gaps = 34/291 (11%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYK----LEEFINEIFILS 126
+ + + ++G G V A KK K+A+ L K ++E + EI +S
Sbjct: 15 DDYELQEVIGSGATAVV------QAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMS 68
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGT---LYQHLHDRHQNEEYPLTWEMRFRVAI 183
Q +H N+V + + LV + + G+ + +H+ + +++ L +
Sbjct: 69 QCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 128
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 243
EV L YLH HRD+K+ NILL E ++ADFG S F+A K++ T
Sbjct: 129 EVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 185
Query: 244 F----GYLDPEYHQSSQLTD-KSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFV 298
F ++ PE + + D K+D++SFG+ +EL TG P ++L
Sbjct: 186 FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTL----- 240
Query: 299 HSMRKNRLYHILDDQVM--KLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
L + D+ M K GK +F + CL + +KRPT E+
Sbjct: 241 -QNDPPSLETGVQDKEMLKKYGK-----SFRKMISLCLQKDPEKRPTAAEL 285
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 121/236 (51%), Gaps = 29/236 (12%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLE-DGR---IIAVKKSKLAVDDEELYKLEEF 118
SKE+D + + +++G G G V G L+ G+ +A+K K +++ +F
Sbjct: 1 SKEIDISC--VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR---RDF 55
Query: 119 INEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMR 178
++E I+ Q +H NV+ L G ++ +++ EF+ NG+L L QN+ +
Sbjct: 56 LSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL---RQNDG-------Q 105
Query: 179 FRVAIEVAGALAYLHSG----ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 234
F V I++ G L + +G A HR + + NIL++ KV+DFG S+F+ D +
Sbjct: 106 FTV-IQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTS 164
Query: 235 HV--TTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
T+ + G + PE Q + T SDV+S+G+V+ E+++ G++P + N
Sbjct: 165 DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN 220
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 140/321 (43%), Gaps = 48/321 (14%)
Query: 49 SYDG---SVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGRL-----EDGRI-IA 99
SY+G + ID +L +++ + N+ + LG G G V + ED + +A
Sbjct: 13 SYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVA 72
Query: 100 VKKSKLAVDDEELYKLEEFINEIFILSQIN-HRNVVKLLGCCLETEFPLLVYEFIPNGTL 158
VK K +E E ++E+ I+S + H N+V LLG C L++ E+ G L
Sbjct: 73 VKMLKSTAHADEK---EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 129
Query: 159 YQHLH-----DRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD 213
L D + + PL + +VA +A+L AS HRD+ + N+LL
Sbjct: 130 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLT 186
Query: 214 ERYRAKVADFGTSKFIAMDQTH-VTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVE 272
+ AK+ DFG ++ I D + V + ++ PE T +SDV+S+G++L E
Sbjct: 187 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 246
Query: 273 LLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFA----- 327
IFS G + + ++ Y ++ D G + AFA
Sbjct: 247 -------IFSLGLNPYPGI---------LVNSKFYKLVKD-----GYQMAQPAFAPKNIY 285
Query: 328 NLAERCLDLNGKKRPTMEEVS 348
++ + C L RPT +++
Sbjct: 286 SIMQACWALEPTHRPTFQQIC 306
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 22/232 (9%)
Query: 68 KATNHFNVNRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFINEIFILS 126
+ + + LG GG G V + +D G +A+K+ + + + E + EI I+
Sbjct: 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK---NRERWCLEIQIMK 67
Query: 127 QINHRNVVKL------LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR 180
++NH NVV L + PLL E+ G L ++L+ Q E E R
Sbjct: 68 KLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLN---QFENCCGLKEGPIR 124
Query: 181 VAI-EVAGALAYLHSGASSPIYHRDIKSTNILLD---ERYRAKVADFGTSKFIAMDQTHV 236
+ +++ AL YLH I HRD+K NI+L +R K+ D G +K +DQ +
Sbjct: 125 TLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGEL 179
Query: 237 TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 288
T+ GT YL PE + + T D +SFG + E +TG +P Q
Sbjct: 180 CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ 231
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 73 FNVNRILGQGGQGTVYKGR---LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN 129
+++ + LG+G G V E+ + + K AVD E K E IN++ +N
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LN 62
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
H NVVK G E L E+ G L+ + + P RF ++ +
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRF--FHQLMAGV 117
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKIQGTFGYLD 248
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 249 PEYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
PE + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 124/298 (41%), Gaps = 31/298 (10%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAV----DDEELYKL 115
++ E + + + R LGQG G VY+G D I ++++AV + L +
Sbjct: 6 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARD-IIKGEAETRVAVKTVNESASLRER 64
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEE----- 170
EF+NE ++ +VV+LLG + + L+V E + +G L +L E
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 171 YPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA 230
P T + ++A E+A +AYL++ HRD+ + N ++ + K+ DFG ++ I
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIX 181
Query: 231 -MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
D K ++ PE + T SD++SFGVVL E+
Sbjct: 182 ETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI---------------- 225
Query: 290 NVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
SLA + ++ + D N +L C N RPT E+
Sbjct: 226 -TSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEI 282
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 73 FNVNRILGQGGQGTVYKGR---LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN 129
+++ + LG+G G V E+ + + K AVD E K E IN++ +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LN 62
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
H NVVK G E L E+ G L+ + + P RF ++ +
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRF--FHQLMAGV 117
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKIQGTFGYLD 248
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 249 PEYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
PE + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 22/232 (9%)
Query: 68 KATNHFNVNRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFINEIFILS 126
+ + + LG GG G V + +D G +A+K+ + + + E + EI I+
Sbjct: 12 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK---NRERWCLEIQIMK 68
Query: 127 QINHRNVVKL------LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR 180
++NH NVV L + PLL E+ G L ++L+ Q E E R
Sbjct: 69 KLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLN---QFENCCGLKEGPIR 125
Query: 181 VAI-EVAGALAYLHSGASSPIYHRDIKSTNILLD---ERYRAKVADFGTSKFIAMDQTHV 236
+ +++ AL YLH I HRD+K NI+L +R K+ D G +K +DQ +
Sbjct: 126 TLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGEL 180
Query: 237 TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 288
T+ GT YL PE + + T D +SFG + E +TG +P Q
Sbjct: 181 CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ 232
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 15/216 (6%)
Query: 79 LGQGGQGTVYKGRLE--DGRIIAVKKSKLAVDD-EELYKLEEFINEIFILSQINHRNVVK 135
LG G G V +G + G+ ++V L D + +++FI E+ + ++HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 136 LLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSG 195
L G L + V E P G+L L +HQ T R A++VA + YL S
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLS---RYAVQVAEGMGYLESK 130
Query: 196 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLDPEYHQ 253
HRD+ + N+LL R K+ DFG + + + H + + F + PE +
Sbjct: 131 R---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 187
Query: 254 SSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQ 288
+ + SD + FGV L E+ T G++P N SQ
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQ 222
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 73 FNVNRILGQGGQGTVYKGR---LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN 129
+++ + LG+G G V E+ + + K AVD E K E IN++ +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKM-----LN 62
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
H NVVK G E L E+ G L+ + + P RF ++ +
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRF--FHQLMAGV 117
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKIQGTFGYLD 248
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 249 PEYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
PE + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 15/216 (6%)
Query: 79 LGQGGQGTVYKGRLE--DGRIIAVKKSKLAVDD-EELYKLEEFINEIFILSQINHRNVVK 135
LG G G V +G + G+ ++V L D + +++FI E+ + ++HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 136 LLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSG 195
L G L + V E P G+L L +HQ T R A++VA + YL S
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLS---RYAVQVAEGMGYLESK 140
Query: 196 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLDPEYHQ 253
HRD+ + N+LL R K+ DFG + + + H + + F + PE +
Sbjct: 141 R---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 197
Query: 254 SSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQ 288
+ + SD + FGV L E+ T G++P N SQ
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQ 232
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 73 FNVNRILGQGGQGTVYKGR---LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN 129
+++ + LG+G G V E+ + + K AVD E K E IN++ +N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKM-----LN 63
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
H NVVK G E L E+ G L+ + + P RF ++ +
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRF--FHQLMAGV 118
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKIQGTFGYLD 248
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+
Sbjct: 119 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 175
Query: 249 PEYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
PE + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 15/216 (6%)
Query: 79 LGQGGQGTVYKGRLE--DGRIIAVKKSKLAVDD-EELYKLEEFINEIFILSQINHRNVVK 135
LG G G V +G + G+ ++V L D + +++FI E+ + ++HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 136 LLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSG 195
L G L + V E P G+L L +HQ T R A++VA + YL S
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLS---RYAVQVAEGMGYLESK 130
Query: 196 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLDPEYHQ 253
HRD+ + N+LL R K+ DFG + + + H + + F + PE +
Sbjct: 131 R---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 254 SSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQ 288
+ + SD + FGV L E+ T G++P N SQ
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQ 222
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 18/222 (8%)
Query: 73 FNVNRILGQGGQGTVYKGR---LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN 129
+++ + LG+G G V E+ + + K AVD E K E IN++ +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LN 62
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
H NVVK G E L E+ G L+ + E R ++ +
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGV 117
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKIQGTFGYLD 248
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 249 PEYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
PE + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 71 NHFNVNRILGQGGQGTVYKGRL-EDGRIIAVK--KSKLAVDDEELYKLEEFINEIFILSQ 127
++F R+LG+G G V R+ E G + AVK K + + D+++ E + E ILS
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDV---ECTMTEKRILSL 79
Query: 128 INHRNVVKLLGCCLETEFPLL-VYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+ + L CC +T L V EF+ G L H+ + +E RF A E+
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEA----RARFYAA-EII 134
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
AL +LH I +RD+K N+LLD K+ADFG K + T GT Y
Sbjct: 135 SALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK-EGICNGVTTATFCGTPDY 190
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 279
+ PE Q D ++ GV+L E+L G P
Sbjct: 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 73 FNVNRILGQGGQGTVYKGR---LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN 129
+++ + LG+G G V E+ + + K AVD E K E IN++ +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LN 62
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
H NVVK G E L E+ G L+ + + P RF ++ +
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRF--FHQLMAGV 117
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKIQGTFGYLD 248
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 249 PEYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
PE + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQE 216
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 22/231 (9%)
Query: 78 ILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL 136
+LG+G G VY GR L + IA+K+ + + + + EI + + H+N+V+
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKE----IPERDSRYSQPLHEEIALHKHLKHKNIVQY 84
Query: 137 LGCCLETEFPLLVYEFIPNGTLYQHLHDRH---QNEEYPLTWEMRFRVAIEVAGALAYLH 193
LG E F + E +P G+L L + ++ E + + + ++ L YLH
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-----QILEGLKYLH 139
Query: 194 SGASSPIYHRDIKSTNILLDERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY 251
I HRDIK N+L++ Y K++DFGTSK +A T GT Y+ PE
Sbjct: 140 DNQ---IVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEI 194
Query: 252 HQSSQ--LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHS 300
+D++S G ++E+ TGK P + G + + VH
Sbjct: 195 IDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP 245
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 140/321 (43%), Gaps = 48/321 (14%)
Query: 49 SYDG---SVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGRL-----EDGRI-IA 99
SY+G + ID +L +++ + N+ + LG G G V + ED + +A
Sbjct: 21 SYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVA 80
Query: 100 VKKSKLAVDDEELYKLEEFINEIFILSQIN-HRNVVKLLGCCLETEFPLLVYEFIPNGTL 158
VK K +E E ++E+ I+S + H N+V LLG C L++ E+ G L
Sbjct: 81 VKMLKSTAHADEK---EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 159 YQHLH-----DRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD 213
L D + + PL + +VA +A+L AS HRD+ + N+LL
Sbjct: 138 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLT 194
Query: 214 ERYRAKVADFGTSKFIAMDQTH-VTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVE 272
+ AK+ DFG ++ I D + V + ++ PE T +SDV+S+G++L E
Sbjct: 195 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 254
Query: 273 LLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFA----- 327
IFS G + + ++ Y ++ D G + AFA
Sbjct: 255 -------IFSLGLNPYPGI---------LVNSKFYKLVKD-----GYQMAQPAFAPKNIY 293
Query: 328 NLAERCLDLNGKKRPTMEEVS 348
++ + C L RPT +++
Sbjct: 294 SIMQACWALEPTHRPTFQQIC 314
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 100/222 (45%), Gaps = 18/222 (8%)
Query: 73 FNVNRILGQGGQGTVYKGR---LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN 129
+++ + LG+G G V E+ + + K AVD E K EI I + +N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-----KEICINAMLN 63
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
H NVVK G E L E+ G L+ + E R ++ +
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGV 118
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKIQGTFGYLD 248
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+
Sbjct: 119 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 249 PEYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
PE + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 15/216 (6%)
Query: 79 LGQGGQGTVYKGRLE--DGRIIAVKKSKLAVDD-EELYKLEEFINEIFILSQINHRNVVK 135
LG G G V +G + G+ ++V L D + +++FI E+ + ++HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 136 LLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSG 195
L G L + V E P G+L L +HQ T R A++VA + YL S
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLS---RYAVQVAEGMGYLESK 134
Query: 196 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLDPEYHQ 253
HRD+ + N+LL R K+ DFG + + + H + + F + PE +
Sbjct: 135 R---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 254 SSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQ 288
+ + SD + FGV L E+ T G++P N SQ
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQ 226
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 15/216 (6%)
Query: 79 LGQGGQGTVYKGRLE--DGRIIAVKKSKLAVDD-EELYKLEEFINEIFILSQINHRNVVK 135
LG G G V +G + G+ ++V L D + +++FI E+ + ++HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 136 LLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSG 195
L G L + V E P G+L L +HQ T R A++VA + YL S
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLS---RYAVQVAEGMGYLESK 130
Query: 196 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLDPEYHQ 253
HRD+ + N+LL R K+ DFG + + + H + + F + PE +
Sbjct: 131 R---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 254 SSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQ 288
+ + SD + FGV L E+ T G++P N SQ
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQ 222
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 15/216 (6%)
Query: 79 LGQGGQGTVYKGRLE--DGRIIAVKKSKLAVDD-EELYKLEEFINEIFILSQINHRNVVK 135
LG G G V +G + G+ ++V L D + +++FI E+ + ++HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 136 LLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSG 195
L G L + V E P G+L L +HQ T R A++VA + YL S
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLS---RYAVQVAEGMGYLESK 134
Query: 196 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLDPEYHQ 253
HRD+ + N+LL R K+ DFG + + + H + + F + PE +
Sbjct: 135 R---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 254 SSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQ 288
+ + SD + FGV L E+ T G++P N SQ
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQ 226
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 15/216 (6%)
Query: 79 LGQGGQGTVYKGRLE--DGRIIAVKKSKLAVDD-EELYKLEEFINEIFILSQINHRNVVK 135
LG G G V +G + G+ ++V L D + +++FI E+ + ++HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 136 LLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSG 195
L G L + V E P G+L L +HQ T R A++VA + YL S
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLS---RYAVQVAEGMGYLESK 140
Query: 196 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLDPEYHQ 253
HRD+ + N+LL R K+ DFG + + + H + + F + PE +
Sbjct: 141 R---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 197
Query: 254 SSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQ 288
+ + SD + FGV L E+ T G++P N SQ
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQ 232
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 73 FNVNRILGQGGQGTVYKGR---LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN 129
+++ + LG+G G V E+ + + K AVD E K E IN++ +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LN 62
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
H NVVK G E L E+ G L+ + + P RF ++ +
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRF--FHQLMAGV 117
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKIQGTFGYLD 248
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 249 PEYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
PE + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 73 FNVNRILGQGGQGTVYKGR---LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN 129
+++ + LG+G G V E+ + + K AVD E K E IN++ +N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LN 63
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
H NVVK G E L E+ G L+ + + P RF ++ +
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRF--FHQLMAGV 118
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKIQGTFGYLD 248
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+
Sbjct: 119 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 249 PEYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
PE + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 73 FNVNRILGQGGQGTVYKGR---LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN 129
+++ + LG+G G V E+ + + K AVD E K E IN++ +N
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LN 61
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
H NVVK G E L E+ G L+ + + P RF ++ +
Sbjct: 62 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRF--FHQLMAGV 116
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKIQGTFGYLD 248
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+
Sbjct: 117 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 173
Query: 249 PEYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
PE + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 174 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 215
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 73 FNVNRILGQGGQGTVYKGR---LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN 129
+++ + LG+G G V E+ + + K AVD E K E IN++ +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LN 62
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
H NVVK G E L E+ G L+ + + P RF ++ +
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRF--FHQLMAGV 117
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKIQGTFGYLD 248
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 249 PEYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
PE + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 18/222 (8%)
Query: 73 FNVNRILGQGGQGTVYKGR---LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN 129
+++ + LG+G G V E+ + + K AVD E K E IN++ +N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LN 63
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
H NVVK G E L E+ G L+ + E R ++ +
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGV 118
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKIQGTFGYLD 248
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+
Sbjct: 119 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 249 PEYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
PE + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 73 FNVNRILGQGGQGTVYKGR---LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN 129
+++ + LG+G G V E+ + + K AVD E K E IN++ +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKM-----LN 62
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
H NVVK G E L E+ G L+ + + P RF ++ +
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRF--FHQLMAGV 117
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKIQGTFGYLD 248
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 249 PEYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
PE + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 18/222 (8%)
Query: 73 FNVNRILGQGGQGTVYKGR---LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN 129
+++ + LG+G G V E+ + + K AVD E K E IN++ +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LN 62
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
H NVVK G E L E+ G L+ + E R ++ +
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGV 117
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKIQGTFGYLD 248
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 249 PEYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
PE + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 73 FNVNRILGQGGQGTVYKGR---LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN 129
+++ + LG+G G V E+ + + K AVD E K E IN++ +N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LN 63
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
H NVVK G E L E+ G L+ + + P RF ++ +
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRF--FHQLMAGV 118
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKIQGTFGYLD 248
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+
Sbjct: 119 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 249 PEYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
PE + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 73 FNVNRILGQGGQGTVYKGR---LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN 129
+++ + LG+G G V E+ + + K AVD E K E IN++ +N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LN 63
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
H NVVK G E L E+ G L+ + + P RF ++ +
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRF--FHQLMAGV 118
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKIQGTFGYLD 248
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+
Sbjct: 119 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 249 PEYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
PE + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 73 FNVNRILGQGGQGTVYKGR---LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN 129
+++ + LG+G G V E+ + + K AVD E K E IN++ +N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LN 63
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
H NVVK G E L E+ G L+ + + P RF ++ +
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRF--FHQLMAGV 118
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKIQGTFGYLD 248
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+
Sbjct: 119 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 249 PEYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
PE + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 20/230 (8%)
Query: 78 ILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL 136
+LG+G G VY GR L + IA+K+ + + + + EI + + H+N+V+
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKE----IPERDSRYSQPLHEEIALHKHLKHKNIVQY 70
Query: 137 LGCCLETEFPLLVYEFIPNGTLYQHLHDRH---QNEEYPLTWEMRFRVAIEVAGALAYLH 193
LG E F + E +P G+L L + ++ E + + + ++ L YLH
Sbjct: 71 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-----QILEGLKYLH 125
Query: 194 SGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYH 252
I HRDIK N+L++ K++DFGTSK +A T GT Y+ PE
Sbjct: 126 DNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEII 181
Query: 253 QSSQ--LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHS 300
+D++S G ++E+ TGK P + G + + VH
Sbjct: 182 DKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP 231
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 18/222 (8%)
Query: 73 FNVNRILGQGGQGTVYKGR---LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN 129
+++ + LG+G G V E+ + + K AVD E K E IN++ +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LN 62
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
H NVVK G E L E+ G L+ + E R ++ +
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGV 117
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKIQGTFGYLD 248
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 249 PEYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
PE + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 79 LGQGGQGTVYKGRL-EDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G V + G+++AVKK +D + + E NE+ I+ H NVV++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKK----MDLRKQQRRELLFNEVVIMRDYQHENVVEMY 83
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
L + +V EF+ G L + NEE V + V AL+ LH+
Sbjct: 84 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVLHAQG- 136
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLDPEYHQSS 255
+ HRDIKS +ILL R K++DFG F A V + + GT ++ PE
Sbjct: 137 --VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRL 191
Query: 256 QLTDKSDVYSFGVVLVELLTGKKPIFS 282
+ D++S G++++E++ G+ P F+
Sbjct: 192 PYGPEVDIWSLGIMVIEMVDGEPPYFN 218
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 73 FNVNRILGQGGQGTVYKGR---LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN 129
+++ + LG+G G V E+ + + K AVD E K E IN++ +N
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LN 63
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
H NVVK G E L E+ G L+ + + P RF ++ +
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRF--FHQLMAGV 118
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKIQGTFGYLD 248
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+
Sbjct: 119 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 249 PEYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
PE + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 79 LGQGGQGTVYKGRL-EDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G V + G+++AVKK +D + + E NE+ I+ H NVV++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKK----MDLRKQQRRELLFNEVVIMRDYQHENVVEMY 87
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
L + +V EF+ G L + NEE V + V AL+ LH+
Sbjct: 88 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVLHAQG- 140
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLDPEYHQSS 255
+ HRDIKS +ILL R K++DFG F A V + + GT ++ PE
Sbjct: 141 --VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRL 195
Query: 256 QLTDKSDVYSFGVVLVELLTGKKPIFS 282
+ D++S G++++E++ G+ P F+
Sbjct: 196 PYGPEVDIWSLGIMVIEMVDGEPPYFN 222
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 110/221 (49%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++L G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L++ + +P G L ++ + N +Y L W
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 130
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 131 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 188 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 79 LGQGGQGTVYKGRL-EDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G V + G+++AVKK +D + + E NE+ I+ H NVV++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKK----MDLRKQQRRELLFNEVVIMRDYQHENVVEMY 92
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
L + +V EF+ G L + NEE V + V AL+ LH+
Sbjct: 93 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVLHAQG- 145
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLDPEYHQSS 255
+ HRDIKS +ILL R K++DFG F A V + + GT ++ PE
Sbjct: 146 --VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRL 200
Query: 256 QLTDKSDVYSFGVVLVELLTGKKPIFS 282
+ D++S G++++E++ G+ P F+
Sbjct: 201 PYGPEVDIWSLGIMVIEMVDGEPPYFN 227
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 18/222 (8%)
Query: 73 FNVNRILGQGGQGTVYKGR---LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN 129
+++ + LG+G G V E+ + + K AVD E K E IN++ +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LN 62
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
H NVVK G E L E+ G L+ + E R ++ +
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-----RFFHQLMAGV 117
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKIQGTFGYLD 248
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 249 PEYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
PE + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 79 LGQGGQGTVYKGRL-EDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G V + G+++AVKK +D + + E NE+ I+ H NVV++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKK----MDLRKQQRRELLFNEVVIMRDYQHENVVEMY 94
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
L + +V EF+ G L + NEE V + V AL+ LH+
Sbjct: 95 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVLHAQG- 147
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLDPEYHQSS 255
+ HRDIKS +ILL R K++DFG F A V + + GT ++ PE
Sbjct: 148 --VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRL 202
Query: 256 QLTDKSDVYSFGVVLVELLTGKKPIFS 282
+ D++S G++++E++ G+ P F+
Sbjct: 203 PYGPEVDIWSLGIMVIEMVDGEPPYFN 229
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 73 FNVNRILGQGGQGTVYKGR---LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN 129
+++ + LG+G G V E+ + + K AVD E K E IN++ +N
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----LN 62
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
H NVVK G E L E+ G L+ + + P RF ++ +
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRF--FHQLMAGV 117
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAMDQTHVTTKIQGTFGYLD 248
YLH I HRDIK N+LLDER K++DFG + F ++ + K+ GT Y+
Sbjct: 118 VYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 249 PEYHQSSQL-TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
PE + + + DV+S G+VL +L G+ P ++ QE
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 79 LGQGGQGTV-YKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G V G+ +AVKK +D + + E NE+ I+ +H NVV +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKK----MDLRKQQRRELLFNEVVIMRDYHHDNVVDMY 108
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
L + +V EF+ G L + NEE T V + V AL+YLH+
Sbjct: 109 SSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAT------VCLSVLRALSYLHNQG- 161
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLDPEYHQSS 255
+ HRDIKS +ILL R K++DFG F A V + + GT ++ PE
Sbjct: 162 --VIHRDIKSDSILLTSDGRIKLSDFG---FCAQVSKEVPKRKXLVGTPYWMAPEVISRL 216
Query: 256 QLTDKSDVYSFGVVLVELLTGKKPIFS 282
+ D++S G++++E++ G+ P F+
Sbjct: 217 PYGTEVDIWSLGIMVIEMIDGEPPYFN 243
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++L G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L+ + +P G L ++ + N +Y L W
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 123
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 124 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 181 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 28/221 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL------EEFINEIFI 124
F ++L G GTVYKG I +K K+ V +EL + +E ++E ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLW----IPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQN--EEYPLTWEMRFRVA 182
++ +++ +V +LLG CL + L+ + +P G L ++ + N +Y L W
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------C 130
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT---K 239
+++A + YL + HRD+ + N+L+ K+ DFG +K + ++ K
Sbjct: 131 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + L+ H+ T +SDV+S+GV + EL+T G KP
Sbjct: 188 VPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 79 LGQGGQGTVYKGRL-EDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G V + G+++AVKK +D + + E NE+ I+ H NVV++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKK----MDLRKQQRRELLFNEVVIMRDYQHENVVEMY 137
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
L + +V EF+ G L + NEE V + V AL+ LH+
Sbjct: 138 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVLHAQG- 190
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLDPEYHQSS 255
+ HRDIKS +ILL R K++DFG F A V + + GT ++ PE
Sbjct: 191 --VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRL 245
Query: 256 QLTDKSDVYSFGVVLVELLTGKKPIFS 282
+ D++S G++++E++ G+ P F+
Sbjct: 246 PYGPEVDIWSLGIMVIEMVDGEPPYFN 272
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 117/234 (50%), Gaps = 27/234 (11%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTVYKGRLE-DGR---IIAVKKSKLAVDDEELYKLEEF 118
+KE++ + + R++G G G V GRL+ G+ +A+K K+ +++ +F
Sbjct: 16 AKEIEASC--ITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQR---RDF 70
Query: 119 INEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMR 178
+ E I+ Q +H N++ L G +++ ++V E++ NG+L L + +
Sbjct: 71 LGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKN----------DGQ 120
Query: 179 FRVAIEVAGALAYLHSG----ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 234
F V I++ G L + +G + HRD+ + NIL++ KV+DFG S+ + D
Sbjct: 121 FTV-IQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 179
Query: 235 HVTTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
T G + PE + T SDV+S+G+V+ E+++ G++P + N
Sbjct: 180 AAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTN 233
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 116/263 (44%), Gaps = 33/263 (12%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------RLEDGRIIAVKKSKLAVDDEELYK 114
+ + + + + + + LG+G G V + + R +AVK K E
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 78
Query: 115 LEEFINEIFILSQINHR-NVVKLLGCCLETEFPLLV-YEFIPNGTLYQHLHDRHQNEEYP 172
L ++E+ IL I H NVV LLG C + PL+V EF G L +L + +NE P
Sbjct: 79 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK-RNEFVP 134
Query: 173 ----------LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVAD 222
LT E + +VA + +L AS HRD+ + NILL E+ K+ D
Sbjct: 135 YKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICD 191
Query: 223 FGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 281
FG ++ I D V + ++ PE T +SDV+SFGV+L E IF
Sbjct: 192 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------IF 244
Query: 282 STGNTSQENVSLAAYFVHSMRKN 304
S G + V + F +++
Sbjct: 245 SLGASPYPGVKIDEEFCRRLKEG 267
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 117/265 (44%), Gaps = 35/265 (13%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------RLEDGRIIAVKKSKLAVDDEELYK 114
+ + + + + + + LG+G G V + + R +AVK K E
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 115 LEEFINEIFILSQINHR-NVVKLLGCCLETEFPLLV-YEFIPNGTLYQHLHDRHQNEEYP 172
L ++E+ IL I H NVV LLG C + PL+V EF G L +L + +NE P
Sbjct: 77 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK-RNEFVP 132
Query: 173 ------------LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKV 220
LT E + +VA + +L AS HRD+ + NILL E+ K+
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 189
Query: 221 ADFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 279
DFG ++ I D +V + ++ PE T +SDV+SFGV+L E
Sbjct: 190 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE------- 242
Query: 280 IFSTGNTSQENVSLAAYFVHSMRKN 304
IFS G + V + F +++
Sbjct: 243 IFSLGASPYPGVKIDEEFCRRLKEG 267
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 18/210 (8%)
Query: 77 RILGQGGQGTVYKG-RLEDGRIIAVKKS-KLAVDDEELYKLEEFINEIFILSQINHRNVV 134
++LG G GTVYKG + DG + + + K+ ++ +E ++E ++++ + V
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 135 KLLGCCLETEFPLLVYEFIPNGTLYQHLHD---RHQNEEYPLTWEMRFRVAIEVAGALAY 191
+LLG CL T LV + +P G L H+ + R +++ L W M ++A ++Y
Sbjct: 83 RLLGICL-TSTVQLVTQLMPYGCLLDHVRENRGRLGSQDL-LNWCM------QIAKGMSY 134
Query: 192 LHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTFGYLDPE 250
L + HRD+ + N+L+ K+ DFG ++ + +D+T + ++ E
Sbjct: 135 LEDVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALE 191
Query: 251 YHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ T +SDV+S+GV + EL+T G KP
Sbjct: 192 SILRRRFTHQSDVWSYGVTVWELMTFGAKP 221
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 112/209 (53%), Gaps = 21/209 (10%)
Query: 79 LGQGGQGTVYKG--RLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVK 135
LG G G+V +G R+ +I +A+K K + + EE + E I+ Q+++ +V+
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADT---EEMMREAQIMHQLDNPYIVR 400
Query: 136 LLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLT--WEMRFRVAIEVAGALAYLH 193
L+G C + E +LV E G L++ L + EE P++ E+ +V++ + YL
Sbjct: 401 LIGVC-QAEALMLVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSM----GMKYLE 453
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEY 251
HR++ + N+LL R+ AK++DFG SK + D ++ T + G + + PE
Sbjct: 454 EKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC 510
Query: 252 HQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + +SDV+S+GV + E L+ G+KP
Sbjct: 511 INFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 117/265 (44%), Gaps = 35/265 (13%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------RLEDGRIIAVKKSKLAVDDEELYK 114
+ + + + + + + LG+G G V + + R +AVK K E
Sbjct: 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 113
Query: 115 LEEFINEIFILSQINHR-NVVKLLGCCLETEFPLLV-YEFIPNGTLYQHLHDRHQNEEYP 172
L ++E+ IL I H NVV LLG C + PL+V EF G L +L + +NE P
Sbjct: 114 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK-RNEFVP 169
Query: 173 ------------LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKV 220
LT E + +VA + +L AS HRD+ + NILL E+ K+
Sbjct: 170 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 226
Query: 221 ADFGTSKFIAMDQTHV-TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 279
DFG ++ I D +V + ++ PE T +SDV+SFGV+L E
Sbjct: 227 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE------- 279
Query: 280 IFSTGNTSQENVSLAAYFVHSMRKN 304
IFS G + V + F +++
Sbjct: 280 IFSLGASPYPGVKIDEEFCRRLKEG 304
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 79 LGQGGQGTVYKGRL-EDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G V + G+++AVKK +D + + E NE+ I+ H NVV++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKK----MDLRKQQRRELLFNEVVIMRDYQHENVVEMY 214
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
L + +V EF+ G L + NEE V + V AL+ LH+
Sbjct: 215 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVLHAQG- 267
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK--IQGTFGYLDPEYHQSS 255
+ HRDIKS +ILL R K++DFG F A V + + GT ++ PE
Sbjct: 268 --VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPELISRL 322
Query: 256 QLTDKSDVYSFGVVLVELLTGKKPIFS 282
+ D++S G++++E++ G+ P F+
Sbjct: 323 PYGPEVDIWSLGIMVIEMVDGEPPYFN 349
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 117/265 (44%), Gaps = 35/265 (13%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------RLEDGRIIAVKKSKLAVDDEELYK 114
+ + + + + + + LG+G G V + + R +AVK K E
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 115 LEEFINEIFILSQINHR-NVVKLLGCCLETEFPLLVY-EFIPNGTLYQHLHDRHQNEEYP 172
L ++E+ IL I H NVV LLG C + PL+V EF G L +L + +NE P
Sbjct: 68 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSK-RNEFVP 123
Query: 173 ------------LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKV 220
LT E + +VA + +L AS HRD+ + NILL E+ K+
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 180
Query: 221 ADFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 279
DFG ++ I D +V + ++ PE T +SDV+SFGV+L E
Sbjct: 181 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE------- 233
Query: 280 IFSTGNTSQENVSLAAYFVHSMRKN 304
IFS G + V + F +++
Sbjct: 234 IFSLGASPYPGVKIDEEFCRRLKEG 258
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 106/230 (46%), Gaps = 18/230 (7%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKG----RLEDGRIIAVKKSKLAVDDEELYKLEE 117
S+++ + + R +G+G G V++G +A+K K D E+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS---VREK 57
Query: 118 FINEIFILSQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWE 176
F+ E + Q +H ++VKL+G + TE P+ ++ E G L L R +Y L
Sbjct: 58 FLQEALTMRQFDHPHIVKLIG--VITENPVWIIMELCTLGELRSFLQVR----KYSLDLA 111
Query: 177 MRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 236
A +++ ALAYL S HRDI + N+L+ K+ DFG S+++ +
Sbjct: 112 SLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 168
Query: 237 TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
+K + ++ PE + T SDV+ FGV + E+L G KP N
Sbjct: 169 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 117/265 (44%), Gaps = 35/265 (13%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------RLEDGRIIAVKKSKLAVDDEELYK 114
+ + + + + + + LG+G G V + + R +AVK K E
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 115 LEEFINEIFILSQINHR-NVVKLLGCCLETEFPLLVY-EFIPNGTLYQHLHDRHQNEEYP 172
L ++E+ IL I H NVV LLG C + PL+V EF G L +L + +NE P
Sbjct: 68 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSK-RNEFVP 123
Query: 173 ------------LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKV 220
LT E + +VA + +L AS HRD+ + NILL E+ K+
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 180
Query: 221 ADFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 279
DFG ++ I D +V + ++ PE T +SDV+SFGV+L E
Sbjct: 181 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE------- 233
Query: 280 IFSTGNTSQENVSLAAYFVHSMRKN 304
IFS G + V + F +++
Sbjct: 234 IFSLGASPYPGVKIDEEFCRRLKEG 258
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 117/265 (44%), Gaps = 35/265 (13%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------RLEDGRIIAVKKSKLAVDDEELYK 114
+ + + + + + + LG+G G V + + R +AVK K E
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 115 LEEFINEIFILSQINHR-NVVKLLGCCLETEFPLLV-YEFIPNGTLYQHLHDRHQNEEYP 172
L ++E+ IL I H NVV LLG C + PL+V EF G L +L + +NE P
Sbjct: 79 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK-RNEFVP 134
Query: 173 ------------LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKV 220
LT E + +VA + +L AS HRD+ + NILL E+ K+
Sbjct: 135 YKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 191
Query: 221 ADFGTSKFIAMDQTHV-TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 279
DFG ++ I D +V + ++ PE T +SDV+SFGV+L E
Sbjct: 192 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE------- 244
Query: 280 IFSTGNTSQENVSLAAYFVHSMRKN 304
IFS G + V + F +++
Sbjct: 245 IFSLGASPYPGVKIDEEFCRRLKEG 269
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 116/265 (43%), Gaps = 35/265 (13%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------RLEDGRIIAVKKSKLAVDDEELYK 114
+ + + + + + + LG+G G V + + R +AVK K E
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 115 LEEFINEIFILSQINHR-NVVKLLGCCLETEFPLLVY-EFIPNGTLYQHLHDRHQNEEYP 172
L ++E+ IL I H NVV LLG C + PL+V EF G L +L + +NE P
Sbjct: 68 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSK-RNEFVP 123
Query: 173 ------------LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKV 220
LT E + +VA + +L AS HRD+ + NILL E+ K+
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 180
Query: 221 ADFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 279
DFG ++ I D V + ++ PE T +SDV+SFGV+L E
Sbjct: 181 CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE------- 233
Query: 280 IFSTGNTSQENVSLAAYFVHSMRKN 304
IFS G + V + F +++
Sbjct: 234 IFSLGASPYPGVKIDEEFCRRLKEG 258
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 116/265 (43%), Gaps = 35/265 (13%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------RLEDGRIIAVKKSKLAVDDEELYK 114
+ + + + + + + LG+G G V + + R +AVK K E
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 115 LEEFINEIFILSQINHR-NVVKLLGCCLETEFPLLV-YEFIPNGTLYQHLHDRHQNEEYP 172
L ++E+ IL I H NVV LLG C + PL+V EF G L +L + +NE P
Sbjct: 68 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK-RNEFVP 123
Query: 173 ------------LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKV 220
LT E + +VA + +L AS HRD+ + NILL E+ K+
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 180
Query: 221 ADFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 279
DFG ++ I D V + ++ PE T +SDV+SFGV+L E
Sbjct: 181 CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE------- 233
Query: 280 IFSTGNTSQENVSLAAYFVHSMRKN 304
IFS G + V + F +++
Sbjct: 234 IFSLGASPYPGVKIDEEFCRRLKEG 258
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 129/302 (42%), Gaps = 50/302 (16%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLE-DGRII--AVKKSK-LAVDDEELYKLEEFINEIFILS 126
N ++G+G G V K R++ DG + A+K+ K A D+ +F E+ +L
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH----RDFAGELEVLC 80
Query: 127 QINHR-NVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYP-----------LT 174
++ H N++ LLG C + L E+ P+G L L E P L+
Sbjct: 81 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 140
Query: 175 WEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 234
+ A +VA + YL + HRD+ + NIL+ E Y AK+ADFG S+ Q
Sbjct: 141 SQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQE 193
Query: 235 HVTTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 292
K G ++ E S T SDV+S+GV+L E I S G T ++
Sbjct: 194 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE-------IVSLGGTPYCGMT 246
Query: 293 LAAYFVHSMRKNRLYHIL--DDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEVSME 350
A + + RL L DD+V +L +C +RP+ ++ +
Sbjct: 247 CAELYEKLPQGYRLEKPLNCDDEVY------------DLMRQCWREKPYERPSFAQILVS 294
Query: 351 LN 352
LN
Sbjct: 295 LN 296
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 116/265 (43%), Gaps = 35/265 (13%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------RLEDGRIIAVKKSKLAVDDEELYK 114
+ + + + + + + LG+G G V + + R +AVK K E
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 115 LEEFINEIFILSQINHR-NVVKLLGCCLETEFPLLV-YEFIPNGTLYQHLHDRHQNEEYP 172
L ++E+ IL I H NVV LLG C + PL+V EF G L +L + +NE P
Sbjct: 77 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK-RNEFVP 132
Query: 173 ------------LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKV 220
LT E + +VA + +L AS HRD+ + NILL E+ K+
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 189
Query: 221 ADFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 279
DFG ++ I D V + ++ PE T +SDV+SFGV+L E
Sbjct: 190 CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE------- 242
Query: 280 IFSTGNTSQENVSLAAYFVHSMRKN 304
IFS G + V + F +++
Sbjct: 243 IFSLGASPYPGVKIDEEFCRRLKEG 267
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 18/230 (7%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKG---RLEDGRI-IAVKKSKLAVDDEELYKLEE 117
S+++ + + R +G+G G V++G E+ + +A+K K D E+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS---VREK 57
Query: 118 FINEIFILSQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWE 176
F+ E + Q +H ++VKL+G + TE P+ ++ E G L L R +Y L
Sbjct: 58 FLQEALTMRQFDHPHIVKLIG--VITENPVWIIMELCTLGELRSFLQVR----KYSLDLA 111
Query: 177 MRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 236
A +++ ALAYL S HRDI + N+L+ K+ DFG S+++ +
Sbjct: 112 SLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 168
Query: 237 TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
+K + ++ PE + T SDV+ FGV + E+L G KP N
Sbjct: 169 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 141/326 (43%), Gaps = 54/326 (16%)
Query: 49 SYDG---SVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGRL-----EDGRI-IA 99
SY+G + ID +L +++ + N+ + LG G G V + ED + +A
Sbjct: 21 SYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVA 80
Query: 100 VKKSKLAVDDEELYKLEEFINEIFILSQI-NHRNVVKLLGCCLETEFPLLVYEFIPNGTL 158
VK K +E E ++E+ I+S + H N+V LLG C L++ E+ G L
Sbjct: 81 VKMLKSTAHADEK---EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 159 YQHL-----------HDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKS 207
L ++ N E L+ + +VA +A+L AS HRD+ +
Sbjct: 138 LNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAA 194
Query: 208 TNILLDERYRAKVADFGTSKFIAMDQTH-VTTKIQGTFGYLDPEYHQSSQLTDKSDVYSF 266
N+LL + AK+ DFG ++ I D + V + ++ PE T +SDV+S+
Sbjct: 195 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 254
Query: 267 GVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAF 326
G++L E IFS G + + ++ Y ++ D G + AF
Sbjct: 255 GILLWE-------IFSLGLNPYPGI---------LVNSKFYKLVKD-----GYQMAQPAF 293
Query: 327 A-----NLAERCLDLNGKKRPTMEEV 347
A ++ + C L RPT +++
Sbjct: 294 APKNIYSIMQACWALEPTHRPTFQQI 319
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 18/230 (7%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKG---RLEDGRI-IAVKKSKLAVDDEELYKLEE 117
S+++ + + R +G+G G V++G E+ + +A+K K D E+
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS---VREK 59
Query: 118 FINEIFILSQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWE 176
F+ E + Q +H ++VKL+G + TE P+ ++ E G L L R +Y L
Sbjct: 60 FLQEALTMRQFDHPHIVKLIG--VITENPVWIIMELCTLGELRSFLQVR----KYSLDLA 113
Query: 177 MRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 236
A +++ ALAYL S HRDI + N+L+ K+ DFG S+++ +
Sbjct: 114 SLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 170
Query: 237 TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
+K + ++ PE + T SDV+ FGV + E+L G KP N
Sbjct: 171 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 220
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 18/230 (7%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKG---RLEDGRI-IAVKKSKLAVDDEELYKLEE 117
S+++ + + R +G+G G V++G E+ + +A+K K D E+
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS---VREK 62
Query: 118 FINEIFILSQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWE 176
F+ E + Q +H ++VKL+G + TE P+ ++ E G L L R +Y L
Sbjct: 63 FLQEALTMRQFDHPHIVKLIG--VITENPVWIIMELCTLGELRSFLQVR----KYSLDLA 116
Query: 177 MRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 236
A +++ ALAYL S HRDI + N+L+ K+ DFG S+++ +
Sbjct: 117 SLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 173
Query: 237 TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
+K + ++ PE + T SDV+ FGV + E+L G KP N
Sbjct: 174 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 223
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 129/302 (42%), Gaps = 50/302 (16%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLE-DGRII--AVKKSK-LAVDDEELYKLEEFINEIFILS 126
N ++G+G G V K R++ DG + A+K+ K A D+ +F E+ +L
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH----RDFAGELEVLC 70
Query: 127 QINHR-NVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYP-----------LT 174
++ H N++ LLG C + L E+ P+G L L E P L+
Sbjct: 71 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 130
Query: 175 WEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 234
+ A +VA + YL + HRD+ + NIL+ E Y AK+ADFG S+ Q
Sbjct: 131 SQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQE 183
Query: 235 HVTTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 292
K G ++ E S T SDV+S+GV+L E I S G T ++
Sbjct: 184 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE-------IVSLGGTPYCGMT 236
Query: 293 LAAYFVHSMRKNRLYHIL--DDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEVSME 350
A + + RL L DD+V +L +C +RP+ ++ +
Sbjct: 237 CAELYEKLPQGYRLEKPLNCDDEVY------------DLMRQCWREKPYERPSFAQILVS 284
Query: 351 LN 352
LN
Sbjct: 285 LN 286
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 18/230 (7%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKG---RLEDGRI-IAVKKSKLAVDDEELYKLEE 117
S+++ + + R +G+G G V++G E+ + +A+K K D E+
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS---VREK 60
Query: 118 FINEIFILSQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWE 176
F+ E + Q +H ++VKL+G + TE P+ ++ E G L L R +Y L
Sbjct: 61 FLQEALTMRQFDHPHIVKLIG--VITENPVWIIMELCTLGELRSFLQVR----KYSLDLA 114
Query: 177 MRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 236
A +++ ALAYL S HRDI + N+L+ K+ DFG S+++ +
Sbjct: 115 SLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 171
Query: 237 TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
+K + ++ PE + T SDV+ FGV + E+L G KP N
Sbjct: 172 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 221
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 18/230 (7%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKG---RLEDGRI-IAVKKSKLAVDDEELYKLEE 117
S+++ + + R +G+G G V++G E+ + +A+K K D E+
Sbjct: 29 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS---VREK 85
Query: 118 FINEIFILSQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWE 176
F+ E + Q +H ++VKL+G + TE P+ ++ E G L L R +Y L
Sbjct: 86 FLQEALTMRQFDHPHIVKLIG--VITENPVWIIMELCTLGELRSFLQVR----KYSLDLA 139
Query: 177 MRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 236
A +++ ALAYL S HRDI + N+L+ K+ DFG S+++ +
Sbjct: 140 SLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 196
Query: 237 TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
+K + ++ PE + T SDV+ FGV + E+L G KP N
Sbjct: 197 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 246
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 116/265 (43%), Gaps = 35/265 (13%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------RLEDGRIIAVKKSKLAVDDEELYK 114
+ + + + + + + LG+G G V + + R +AVK K E
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 115 LEEFINEIFILSQINHR-NVVKLLGCCLETEFPLLV-YEFIPNGTLYQHLHDRHQNEEYP 172
L ++E+ IL I H NVV LLG C + PL+V EF G L +L + +NE P
Sbjct: 77 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK-RNEFVP 132
Query: 173 ------------LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKV 220
LT E + +VA + +L AS HRD+ + NILL E+ K+
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 189
Query: 221 ADFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 279
DFG ++ I D V + ++ PE T +SDV+SFGV+L E
Sbjct: 190 CDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE------- 242
Query: 280 IFSTGNTSQENVSLAAYFVHSMRKN 304
IFS G + V + F +++
Sbjct: 243 IFSLGASPYPGVKIDEEFCRRLKEG 267
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 73 FNVNRILGQGGQGTVYKGRL----EDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
F + ++LG G G V+ R + G++ A+K K A ++ E E +L I
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 115
Query: 129 NHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
+ L +TE L L+ ++I G L+ HL R + E+ E++ V E+
Sbjct: 116 RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEH----EVQIYVG-EIVL 170
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 247
AL +LH I +RDIK NILLD + DFG SK D+T GT Y+
Sbjct: 171 ALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYM 227
Query: 248 DPEYHQSSQLT-DKS-DVYSFGVVLVELLTGKKPIFSTGN-TSQENVS 292
P+ + DK+ D +S GV++ ELLTG P G SQ +S
Sbjct: 228 APDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS 275
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 143/290 (49%), Gaps = 37/290 (12%)
Query: 78 ILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL 136
++G+G G V K R +D GRI+A+KK + DD+ + K+ + EI +L Q+ H N+V L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIA--MREIKLLKQLRHENLVNL 89
Query: 137 LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYP--LTWEMRFRVAIEVAGALAYLHS 194
L C + + LV+EF+ + T+ L E +P L +++ + ++ + + H
Sbjct: 90 LEVCKKKKRWYLVFEFV-DHTILDDL------ELFPNGLDYQVVQKYLFQIINGIGFCH- 141
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQS 254
S I HRDIK NIL+ + K+ DFG ++ +A ++ T Y PE
Sbjct: 142 --SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV-ATRWYRAPELLVG 198
Query: 255 SQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENV--------SLAAYFVHSMRKN- 304
K+ DV++ G ++ E+ G +P+F G++ + + +L KN
Sbjct: 199 DVKYGKAVDVWAIGCLVTEMFMG-EPLFP-GDSDIDQLYHIMMCLGNLIPRHQELFNKNP 256
Query: 305 -----RLYHILDDQVM--KLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
RL I + + + + K +++V +LA++CL ++ KRP E+
Sbjct: 257 VFAGVRLPEIKEREPLERRYPKLSEVV--IDLAKKCLHIDPDKRPFCAEL 304
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 136/301 (45%), Gaps = 45/301 (14%)
Query: 73 FNVNRILGQGGQGTVYKGRLEDGRIIAVKK--SKLAVDDEELYKLEE---FINEIFILSQ 127
++V +++G+G G V R + + + K SK E+ K + F E I++
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKF-----EMIKRSDSAFFWEERDIMAF 131
Query: 128 INHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
N VV+L + ++ +V E++P G L + N + P W +F A EV
Sbjct: 132 ANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM----SNYDVPEKW-AKFYTA-EVVL 185
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT---HVTTKIQGTF 244
AL +HS + HRD+K N+LLD+ K+ADFGT + MD+T H T + GT
Sbjct: 186 ALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTC--MKMDETGMVHCDTAV-GTP 239
Query: 245 GYLDPEYHQSSQLTD-----KSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH 299
Y+ PE + SQ D + D +S GV L E+L G P ++ SL +
Sbjct: 240 DYISPEVLK-SQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD--------SLVGTYSK 290
Query: 300 SM-RKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNG----KKRPTMEEVSMELNGI 354
M KN L D ++ K KN I AF E L NG K+ P + + I
Sbjct: 291 IMDHKNSLCFPEDAEISKHA-KNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQWNWDNI 349
Query: 355 R 355
R
Sbjct: 350 R 350
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 106/235 (45%), Gaps = 44/235 (18%)
Query: 78 ILGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL 136
+LGQG G V K R D R A+KK + EE KL ++E+ +L+ +NH+ VV+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIR---HTEE--KLSTILSEVXLLASLNHQYVVRY 67
Query: 137 LGCCLE-------------TEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAI 183
LE + E+ N TLY +H + N++ W + FR +
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL-FRQIL 126
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-------FIAMDQTHV 236
E AL+Y+HS I HR++K NI +DE K+ DFG +K + +D ++
Sbjct: 127 E---ALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 237 T------TKIQGTFGYLDPE-YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTG 284
T GT Y+ E + +K D YS G++ E + FSTG
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYP----FSTG 231
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 124/298 (41%), Gaps = 31/298 (10%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAV----DDEELYKL 115
++ E + + + R LGQG G VY+G D I ++++AV + L +
Sbjct: 7 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARD-IIKGEAETRVAVKTVNESASLRER 65
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEE----- 170
EF+NE ++ +VV+LLG + + L+V E + +G L +L E
Sbjct: 66 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 125
Query: 171 YPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI- 229
P T + ++A E+A +AYL++ HR++ + N ++ + K+ DFG ++ I
Sbjct: 126 PPPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIY 182
Query: 230 AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
D K ++ PE + T SD++SFGVVL E+
Sbjct: 183 ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI---------------- 226
Query: 290 NVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
SLA + ++ + D N +L C N RPT E+
Sbjct: 227 -TSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEI 283
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 124/298 (41%), Gaps = 31/298 (10%)
Query: 60 LFSSKELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAV----DDEELYKL 115
++ E + + + R LGQG G VY+G D I ++++AV + L +
Sbjct: 6 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARD-IIKGEAETRVAVKTVNESASLRER 64
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEE----- 170
EF+NE ++ +VV+LLG + + L+V E + +G L +L E
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 171 YPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI- 229
P T + ++A E+A +AYL++ HR++ + N ++ + K+ DFG ++ I
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIY 181
Query: 230 AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
D K ++ PE + T SD++SFGVVL E+
Sbjct: 182 ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI---------------- 225
Query: 290 NVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
SLA + ++ + D N +L C N RPT E+
Sbjct: 226 -TSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEI 282
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 113/226 (50%), Gaps = 19/226 (8%)
Query: 58 CKLFSSKELDKATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYK-L 115
++F EL K ++LG G GTV+KG + +G I + ++D+ +
Sbjct: 25 ARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSF 77
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTW 175
+ + + + ++H ++V+LLG C + LV +++P G+L H+ +H+ P
Sbjct: 78 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHVR-QHRGALGP--- 132
Query: 176 EMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTH 235
++ +++A + YL + HR++ + N+LL + +VADFG + + D
Sbjct: 133 QLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 189
Query: 236 VT-TKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ ++ + ++ E + T +SDV+S+GV + EL+T G +P
Sbjct: 190 LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 235
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 37/278 (13%)
Query: 79 LGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG+G G V K R + G+I+AVK+ + V+ +E +L ++ + ++ V
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRL--LMDLDISMRTVDCPFTVTFY 72
Query: 138 GCCLETEFPLLVYEFIPNG--TLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSG 195
G + E + Y+ + D+ Q + ++ ++A+ + AL +LHS
Sbjct: 73 GALFREGDVWICMELMDTSLDKFYKQVIDKGQT----IPEDILGKIAVSIVKALEHLHSK 128
Query: 196 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ-GTFGYL-----DP 249
S + HRD+K +N+L++ + K+ DFG S ++ D V I G Y+ +P
Sbjct: 129 LS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDD---VAKDIDAGCKPYMAPERINP 183
Query: 250 EYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHI 309
E +Q + KSD++S G+ ++EL + P S G Q+ L +
Sbjct: 184 ELNQKG-YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ----------------LKQV 226
Query: 310 LDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+++ +L F + +CL N K+RPT E+
Sbjct: 227 VEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 264
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 104/217 (47%), Gaps = 18/217 (8%)
Query: 75 VNRILGQGGQGTVYKG---RLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINH 130
+ R +G+G G V++G E+ + +A+K K D E+F+ E + Q +H
Sbjct: 11 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS---VREKFLQEALTMRQFDH 67
Query: 131 RNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
++VKL+G + TE P+ ++ E G L L R +Y L A +++ AL
Sbjct: 68 PHIVKLIG--VITENPVWIIMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTAL 121
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDP 249
AYL S HRDI + N+L+ K+ DFG S+++ + +K + ++ P
Sbjct: 122 AYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 178
Query: 250 EYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
E + T SDV+ FGV + E+L G KP N
Sbjct: 179 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 215
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 116/267 (43%), Gaps = 40/267 (14%)
Query: 75 VNRILGQGGQGTVYKGRL------EDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
+ + LG+G G V + R+ V L D E L + I+E+ ++ I
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE-KDLSDLISEMEMMKMI 90
Query: 129 N-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRH-----------QNEEYPLTWE 176
H+N++ LLG C + ++ E+ G L ++L R N E L+ +
Sbjct: 91 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSK 150
Query: 177 MRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTH 235
A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXK 207
Query: 236 VTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAA 295
TT + ++ PE T +SDV+SFGV+L E IF+ G + V +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE-------IFTLGGSPYPGVPVEE 260
Query: 296 YFV-----HSMRK-----NRLYHILDD 312
F H M K N LY ++ D
Sbjct: 261 LFKLLKEGHRMDKPSNCTNELYMMMRD 287
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 110/209 (52%), Gaps = 15/209 (7%)
Query: 76 NRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL-EEFINEIFILSQINHRNVV 134
++ LG G GTV KG + +++ K+ ++ L +E + E ++ Q+++ +V
Sbjct: 10 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 69
Query: 135 KLLGCCLETEFPLLVYEFIPNGTLYQHLH-DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+++G C E E +LV E G L ++L +RH ++ + + +V+ + YL
Sbjct: 70 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYLE 122
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEY 251
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 123 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 179
Query: 252 HQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + KSDV+SFGV++ E + G+KP
Sbjct: 180 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 113/226 (50%), Gaps = 19/226 (8%)
Query: 58 CKLFSSKELDKATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYK-L 115
++F EL K ++LG G GTV+KG + +G I + ++D+ +
Sbjct: 7 ARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSF 59
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTW 175
+ + + + ++H ++V+LLG C + LV +++P G+L H+ +H+ P
Sbjct: 60 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHVR-QHRGALGP--- 114
Query: 176 EMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTH 235
++ +++A + YL + HR++ + N+LL + +VADFG + + D
Sbjct: 115 QLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 171
Query: 236 VT-TKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ ++ + ++ E + T +SDV+S+GV + EL+T G +P
Sbjct: 172 LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 217
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 105/230 (45%), Gaps = 18/230 (7%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKG----RLEDGRIIAVKKSKLAVDDEELYKLEE 117
S+++ + + R +G+G G V++G +A+K K D E+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS---VREK 57
Query: 118 FINEIFILSQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWE 176
F+ E + Q +H ++VKL+G + TE P+ ++ E G L L R ++ L
Sbjct: 58 FLQEALTMRQFDHPHIVKLIG--VITENPVWIIMELCTLGELRSFLQVR----KFSLDLA 111
Query: 177 MRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 236
A +++ ALAYL S HRDI + N+L+ K+ DFG S+++
Sbjct: 112 SLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXK 168
Query: 237 TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
+K + ++ PE + T SDV+ FGV + E+L G KP N
Sbjct: 169 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 110/209 (52%), Gaps = 15/209 (7%)
Query: 76 NRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL-EEFINEIFILSQINHRNVV 134
++ LG G GTV KG + +++ K+ ++ L +E + E ++ Q+++ +V
Sbjct: 12 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71
Query: 135 KLLGCCLETEFPLLVYEFIPNGTLYQHLH-DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+++G C E E +LV E G L ++L +RH ++ + + +V+ + YL
Sbjct: 72 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYLE 124
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEY 251
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 125 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 181
Query: 252 HQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + KSDV+SFGV++ E + G+KP
Sbjct: 182 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 92/166 (55%), Gaps = 12/166 (7%)
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLT 174
+ F+ E +++Q+ H N+V+LLG +E + L +V E++ G+L +L R ++ L
Sbjct: 50 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV---LG 106
Query: 175 WEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 234
+ + +++V A+ YL + HRD+ + N+L+ E AKV+DFG +K + Q
Sbjct: 107 GDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 163
Query: 235 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
++ T PE + + + KSDV+SFG++L E+ + G+ P
Sbjct: 164 TGKLPVKWT----APEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 17/207 (8%)
Query: 79 LGQGGQGTVYKGRL-EDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G V+K R + G +IAVK+ + + + EE ++ ++ +L + +V+
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRI--LMDLDVVLKSHDCPYIVQCF 90
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G + + E + GT + L R Q P+ + ++ + + AL YL
Sbjct: 91 GTFITNTDVFIAMELM--GTCAEKLKKRMQG---PIPERILGKMTVAIVKALYYLKEKHG 145
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
+ HRD+K +NILLDER + K+ DFG S + D+ + G Y+ PE
Sbjct: 146 --VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK--DRSAGCAAYMAPERIDPPDP 201
Query: 258 TD-----KSDVYSFGVVLVELLTGKKP 279
T ++DV+S G+ LVEL TG+ P
Sbjct: 202 TKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 92/166 (55%), Gaps = 12/166 (7%)
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLT 174
+ F+ E +++Q+ H N+V+LLG +E + L +V E++ G+L +L R ++ L
Sbjct: 59 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV---LG 115
Query: 175 WEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 234
+ + +++V A+ YL + HRD+ + N+L+ E AKV+DFG +K + Q
Sbjct: 116 GDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 172
Query: 235 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
++ T PE + + + KSDV+SFG++L E+ + G+ P
Sbjct: 173 TGKLPVKWT----APEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 110/209 (52%), Gaps = 15/209 (7%)
Query: 76 NRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL-EEFINEIFILSQINHRNVV 134
++ LG G GTV KG + +++ K+ ++ L +E + E ++ Q+++ +V
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 135 KLLGCCLETEFPLLVYEFIPNGTLYQHLH-DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+++G C E E +LV E G L ++L +RH ++ + + +V+ + YL
Sbjct: 76 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYLE 128
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEY 251
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 129 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 185
Query: 252 HQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + KSDV+SFGV++ E + G+KP
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 110/209 (52%), Gaps = 15/209 (7%)
Query: 76 NRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL-EEFINEIFILSQINHRNVV 134
++ LG G GTV KG + +++ K+ ++ L +E + E ++ Q+++ +V
Sbjct: 22 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81
Query: 135 KLLGCCLETEFPLLVYEFIPNGTLYQHLH-DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+++G C E E +LV E G L ++L +RH ++ + + +V+ + YL
Sbjct: 82 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYLE 134
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEY 251
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 135 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 191
Query: 252 HQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + KSDV+SFGV++ E + G+KP
Sbjct: 192 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 44/273 (16%)
Query: 71 NHFNVNRILGQGGQGTVY--------KGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
+ + + LG+G G V K + ++ +AVK K DD L + ++E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 91
Query: 123 FILSQIN-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL-----------HDRHQNEE 170
++ I H+N++ LLG C + ++ E+ G L ++L +D ++ E
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPE 151
Query: 171 YPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI- 229
+T++ ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 230 AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+D TT + ++ PE T +SDV+SFGV++ E IF+ G +
Sbjct: 209 NIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPYP 261
Query: 290 NVSLAAYFV-----HSMRK-----NRLYHILDD 312
+ + F H M K N LY ++ D
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRD 294
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 125/277 (45%), Gaps = 35/277 (12%)
Query: 79 LGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG+G G V K R + G+I+AVK+ + V+ +E +L ++ + ++ V
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRL--LMDLDISMRTVDCPFTVTFY 116
Query: 138 GCCLETEFPLLVYEFIPNG--TLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSG 195
G + E + Y+ + D+ Q + ++ ++A+ + AL +LHS
Sbjct: 117 GALFREGDVWICMELMDTSLDKFYKQVIDKGQT----IPEDILGKIAVSIVKALEHLHSK 172
Query: 196 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL-----DPE 250
S + HRD+K +N+L++ + K+ DFG S ++ + T G Y+ +PE
Sbjct: 173 LS--VIHRDVKPSNVLINALGQVKMCDFGISGYLV--DSVAKTIDAGCKPYMAPERINPE 228
Query: 251 YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHIL 310
+Q + KSD++S G+ ++EL + P S G Q+ L ++
Sbjct: 229 LNQKG-YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ----------------LKQVV 271
Query: 311 DDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
++ +L F + +CL N K+RPT E+
Sbjct: 272 EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 308
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 106/230 (46%), Gaps = 18/230 (7%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKG----RLEDGRIIAVKKSKLAVDDEELYKLEE 117
S+++ + + R +G+G G V++G +A+K K D E+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS---VREK 57
Query: 118 FINEIFILSQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWE 176
F+ E + Q +H ++VKL+G + TE P+ ++ E G L L R ++ L
Sbjct: 58 FLQEALTMRQFDHPHIVKLIG--VITENPVWIIMELCTLGELRSFLQVR----KFSLDLA 111
Query: 177 MRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 236
A +++ ALAYL S HRDI + N+L+ K+ DFG S+++ +
Sbjct: 112 SLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYK 168
Query: 237 TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
+K + ++ PE + T SDV+ FGV + E+L G KP N
Sbjct: 169 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 218
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 100/233 (42%), Gaps = 24/233 (10%)
Query: 62 SSKELDKATNHFNVN-----RILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLE 116
SS D T HF ++ R LG+G G VY R + I K E+
Sbjct: 9 SSGTPDILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEH 68
Query: 117 EFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWE 176
+ EI I + ++H N+++L + L+ E+ P G LY+ L +E +
Sbjct: 69 QLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDE-----Q 123
Query: 177 MRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 236
+ E+A AL Y H + HRDIK N+LL + K+ADFG S H
Sbjct: 124 RTATIMEELADALMYCHGKK---VIHRDIKPENLLLGLKGELKIADFGWS-------VHA 173
Query: 237 TT----KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
+ + GT YL PE + +K D++ GV+ ELL G P S +
Sbjct: 174 PSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASH 226
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 44/273 (16%)
Query: 71 NHFNVNRILGQGGQGTVY--------KGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
+ + + LG+G G V K + ++ +AVK K DD L + ++E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 91
Query: 123 FILSQIN-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL-----------HDRHQNEE 170
++ I H+N++ LLG C + ++ E+ G L ++L +D ++ E
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 171 YPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI- 229
+T++ ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 230 AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+D TT + ++ PE T +SDV+SFGV++ E IF+ G +
Sbjct: 209 NIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPYP 261
Query: 290 NVSLAAYFV-----HSMRK-----NRLYHILDD 312
+ + F H M K N LY ++ D
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRD 294
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 113/241 (46%), Gaps = 28/241 (11%)
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLT 174
+ F+ E +++Q+ H N+V+LLG +E + L +V E++ G+L +L R ++ L
Sbjct: 231 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV---LG 287
Query: 175 WEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 234
+ + +++V A+ YL + HRD+ + N+L+ E AKV+DFG +K + Q
Sbjct: 288 GDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 344
Query: 235 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
++ T PE + + + KSDV+SFG++L E I+S G + L
Sbjct: 345 TGKLPVKWT----APEALREKKFSTKSDVWSFGILLWE-------IYSFGRVPYPRIPLK 393
Query: 295 AYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEVSMELNGI 354
V + K D A ++ + C L+ RPT ++ +L I
Sbjct: 394 D-VVPRVEKGYKMDAPD---------GCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHI 443
Query: 355 R 355
R
Sbjct: 444 R 444
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 92/166 (55%), Gaps = 12/166 (7%)
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLT 174
+ F+ E +++Q+ H N+V+LLG +E + L +V E++ G+L +L R ++ L
Sbjct: 44 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV---LG 100
Query: 175 WEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 234
+ + +++V A+ YL + HRD+ + N+L+ E AKV+DFG +K + Q
Sbjct: 101 GDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 157
Query: 235 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
++ T PE + + + KSDV+SFG++L E+ + G+ P
Sbjct: 158 TGKLPVKWT----APEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 110/209 (52%), Gaps = 15/209 (7%)
Query: 76 NRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL-EEFINEIFILSQINHRNVV 134
++ LG G GTV KG + +++ K+ ++ L +E + E ++ Q+++ +V
Sbjct: 30 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 89
Query: 135 KLLGCCLETEFPLLVYEFIPNGTLYQHLH-DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+++G C E E +LV E G L ++L +RH ++ + + +V+ + YL
Sbjct: 90 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYLE 142
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEY 251
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 143 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 199
Query: 252 HQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + KSDV+SFGV++ E + G+KP
Sbjct: 200 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 18/236 (7%)
Query: 56 DRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKG----RLEDGRIIAVKKSKLAVDDEE 111
D + S+++ + + R +G+G G V++G +A+K K D
Sbjct: 375 DTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS- 433
Query: 112 LYKLEEFINEIFILSQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEE 170
E+F+ E + Q +H ++VKL+G TE P+ ++ E G L L R +
Sbjct: 434 --VREKFLQEALTMRQFDHPHIVKLIGVI--TENPVWIIMELCTLGELRSFLQVR----K 485
Query: 171 YPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA 230
+ L A +++ ALAYL S HRDI + N+L+ K+ DFG S+++
Sbjct: 486 FSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542
Query: 231 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
+ +K + ++ PE + T SDV+ FGV + E+L G KP N
Sbjct: 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 598
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 110/209 (52%), Gaps = 15/209 (7%)
Query: 76 NRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL-EEFINEIFILSQINHRNVV 134
++ LG G GTV KG + +++ K+ ++ L +E + E ++ Q+++ +V
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 135 KLLGCCLETEFPLLVYEFIPNGTLYQHLH-DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+++G C E E +LV E G L ++L +RH ++ + + +V+ + YL
Sbjct: 92 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYLE 144
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEY 251
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 145 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 201
Query: 252 HQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + KSDV+SFGV++ E + G+KP
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 110/209 (52%), Gaps = 15/209 (7%)
Query: 76 NRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL-EEFINEIFILSQINHRNVV 134
++ LG G GTV KG + +++ K+ ++ L +E + E ++ Q+++ +V
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 135 KLLGCCLETEFPLLVYEFIPNGTLYQHLH-DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+++G C E E +LV E G L ++L +RH ++ + + +V+ + YL
Sbjct: 92 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYLE 144
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEY 251
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 145 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 201
Query: 252 HQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + KSDV+SFGV++ E + G+KP
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 15/209 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G V+ G +A+K K E F+ E I+ ++ H +V+L
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGT-----MSPESFLEEAQIMKKLKHDKLVQLYA 71
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
+E P+ +V E++ G+L L D E L +A +VA +AY+
Sbjct: 72 VV--SEEPIYIVTEYMNKGSLLDFLKD---GEGRALKLPNLVDMAAQVAAGMAYIERMN- 125
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD++S NIL+ K+ADFG ++ I ++ + + PE +
Sbjct: 126 --YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRF 183
Query: 258 TDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
T KSDV+SFG++L EL+T G+ P N
Sbjct: 184 TIKSDVWSFGILLTELVTKGRVPYPGMNN 212
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 129/302 (42%), Gaps = 50/302 (16%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLE-DGRII--AVKKSK-LAVDDEELYKLEEFINEIFILS 126
N ++G+G G V K R++ DG + A+K+ K A D+ +F E+ +L
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH----RDFAGELEVLC 77
Query: 127 QINHR-NVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYP-----------LT 174
++ H N++ LLG C + L E+ P+G L L E P L+
Sbjct: 78 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 137
Query: 175 WEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 234
+ A +VA + YL + HR++ + NIL+ E Y AK+ADFG S+ Q
Sbjct: 138 SQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR----GQE 190
Query: 235 HVTTKIQGTFG--YLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVS 292
K G ++ E S T SDV+S+GV+L E I S G T ++
Sbjct: 191 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE-------IVSLGGTPYCGMT 243
Query: 293 LAAYFVHSMRKNRLYHIL--DDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEVSME 350
A + + RL L DD+V +L +C +RP+ ++ +
Sbjct: 244 CAELYEKLPQGYRLEKPLNCDDEVY------------DLMRQCWREKPYERPSFAQILVS 291
Query: 351 LN 352
LN
Sbjct: 292 LN 293
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 23/224 (10%)
Query: 63 SKELDKATNHFNVNRILGQGGQGTV-YKGRLEDGRIIAVK---KSKLAVDDEELYKLEEF 118
K+ D+ ++ ++ +G GG V + G ++A+K K+ L D L
Sbjct: 2 PKDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSD------LPRI 55
Query: 119 INEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL--HDRHQNEEYPLTWE 176
EI L + H+++ +L +V E+ P G L+ ++ DR EE +
Sbjct: 56 KTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVV-- 113
Query: 177 MRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV 236
FR ++ A+AY+HS + HRD+K N+L DE ++ K+ DFG ++ +
Sbjct: 114 --FR---QIVSAVAYVHSQGYA---HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH 165
Query: 237 TTKIQGTFGYLDPEYHQS-SQLTDKSDVYSFGVVLVELLTGKKP 279
G+ Y PE Q S L ++DV+S G++L L+ G P
Sbjct: 166 LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLP 209
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 27/219 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLED-GRIIAVK---KSKLAVDDEELYKLEEFINEIFILS 126
N F+V+RI+G+GG G VY R D G++ A+K K ++ + E L NE +LS
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLAL----NERIMLS 244
Query: 127 QINHRNVVKLLGCCLETEFPL-----LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRV 181
++ + ++ C+ F + + + G L+ HL E +MRF
Sbjct: 245 LVSTGDCPFIV--CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA----DMRFYA 298
Query: 182 AIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 241
A E+ L ++H+ + +RD+K NILLDE +++D G + + + H +
Sbjct: 299 A-EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 242 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKP 279
GT GY+ PE Q D S D +S G +L +LL G P
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 27/219 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLED-GRIIAVK---KSKLAVDDEELYKLEEFINEIFILS 126
N F+V+RI+G+GG G VY R D G++ A+K K ++ + E L NE +LS
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLAL----NERIMLS 244
Query: 127 QINHRNVVKLLGCCLETEFPL-----LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRV 181
++ + ++ C+ F + + + G L+ HL E +MRF
Sbjct: 245 LVSTGDCPFIV--CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA----DMRFYA 298
Query: 182 AIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 241
A E+ L ++H+ + +RD+K NILLDE +++D G + + + H +
Sbjct: 299 A-EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 242 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKP 279
GT GY+ PE Q D S D +S G +L +LL G P
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 18/236 (7%)
Query: 56 DRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKG----RLEDGRIIAVKKSKLAVDDEE 111
D + S+++ + + R +G+G G V++G +A+K K D
Sbjct: 375 DTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDS- 433
Query: 112 LYKLEEFINEIFILSQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEE 170
E+F+ E + Q +H ++VKL+G TE P+ ++ E G L L R +
Sbjct: 434 --VREKFLQEALTMRQFDHPHIVKLIGVI--TENPVWIIMELCTLGELRSFLQVR----K 485
Query: 171 YPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIA 230
+ L A +++ ALAYL S HRDI + N+L+ K+ DFG S+++
Sbjct: 486 FSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYME 542
Query: 231 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
+ +K + ++ PE + T SDV+ FGV + E+L G KP N
Sbjct: 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 598
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 27/219 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLED-GRIIAVK---KSKLAVDDEELYKLEEFINEIFILS 126
N F+V+RI+G+GG G VY R D G++ A+K K ++ + E L NE +LS
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLAL----NERIMLS 244
Query: 127 QINHRNVVKLLGCCLETEFPL-----LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRV 181
++ + ++ C+ F + + + G L+ HL E +MRF
Sbjct: 245 LVSTGDCPFIV--CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA----DMRF-Y 297
Query: 182 AIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 241
A E+ L ++H+ + +RD+K NILLDE +++D G + + + H +
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 242 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKP 279
GT GY+ PE Q D S D +S G +L +LL G P
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 127/285 (44%), Gaps = 31/285 (10%)
Query: 73 FNVNRILGQGGQGTVYKGRLEDGR----IIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
F ++++LG+G G V+ + I A+KK + +DD+ +E + E +LS
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDD----VECTMVEKRVLSLA 75
Query: 129 NHRNVVKLLGCCLET-EFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
+ + C +T E V E++ G L H+ H+ + T+ A E+
Sbjct: 76 WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF-----YAAEIIL 130
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 247
L +LHS I +RD+K NILLD+ K+ADFG K + T + GT Y+
Sbjct: 131 GLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNEFCGTPDYI 186
Query: 248 DPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLY 307
PE + D +SFGV+L E+L G+ P G +E HS+R + +
Sbjct: 187 APEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF--HGQDEEE-------LFHSIRMDNPF 237
Query: 308 HILDDQVMKLGKKNQIVAFANLAERCLDLNG--KKRPTMEEVSME 350
+ + K K + F E+ L + G ++ P E++ E
Sbjct: 238 Y--PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWE 280
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 123/290 (42%), Gaps = 40/290 (13%)
Query: 52 GSVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGRL------EDGRIIAVKKSKL 105
G+ + +L + + + + LG+G G V + R+ V L
Sbjct: 1 GAGVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML 60
Query: 106 AVDDEELYKLEEFINEIFILSQIN-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHD 164
D E L + I+E+ ++ I H+N++ LLG C + ++ E+ G L ++L
Sbjct: 61 KSDATE-KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA 119
Query: 165 RH-----------QNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD 213
R N E L+ + A +VA + YL AS HRD+ + N+L+
Sbjct: 120 RRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVT 176
Query: 214 ERYRAKVADFGTSKFI-AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVE 272
E K+ADFG ++ I +D TT + ++ PE T +SDV+SFGV+L E
Sbjct: 177 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE 236
Query: 273 LLTGKKPIFSTGNTSQENVSLAAYFV-----HSMRK-----NRLYHILDD 312
IF+ G + V + F H M K N LY ++ D
Sbjct: 237 -------IFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD 279
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 27/219 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLED-GRIIAVK---KSKLAVDDEELYKLEEFINEIFILS 126
N F+V+RI+G+GG G VY R D G++ A+K K ++ + E L NE +LS
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLAL----NERIMLS 243
Query: 127 QINHRNVVKLLGCCLETEFPL-----LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRV 181
++ + ++ C+ F + + + G L+ HL E +MRF
Sbjct: 244 LVSTGDCPFIV--CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA----DMRF-Y 296
Query: 182 AIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ 241
A E+ L ++H+ + +RD+K NILLDE +++D G + + + H +
Sbjct: 297 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 350
Query: 242 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKP 279
GT GY+ PE Q D S D +S G +L +LL G P
Sbjct: 351 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 126/271 (46%), Gaps = 34/271 (12%)
Query: 79 LGQGGQGTVYKGRLEDGR-IIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYKG + ++A+K L ++E+ +++ EI +LSQ + + +
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSPYITRYF 83
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G L++ ++ E++ G+ L E Y T + E+ L YLHS
Sbjct: 84 GSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIAT------ILREILKGLDYLHSERK 137
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRDIK+ N+LL E+ K+ADFG + + Q + GT ++ PE + S
Sbjct: 138 ---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAY 193
Query: 258 TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDDQVMKL 317
K+D++S G+ +EL G+ P N L H MR L+ I + L
Sbjct: 194 DFKADIWSLGITAIELAKGEPP----------NSDL-----HPMR--VLFLIPKNSPPTL 236
Query: 318 -GKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
G+ ++ F E CL+ + + RPT +E+
Sbjct: 237 EGQHSK--PFKEFVEACLNKDPRFRPTAKEL 265
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 44/273 (16%)
Query: 71 NHFNVNRILGQGGQGTVY--------KGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
+ + + LG+G G V K + ++ +AVK K DD L + ++E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEEDLSDLVSEM 91
Query: 123 FILSQIN-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL-----------HDRHQNEE 170
++ I H+N++ LLG C + ++ E+ G L ++L +D ++ E
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 171 YPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI- 229
+T++ ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 230 AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+D TT + ++ PE T +SDV+SFGV++ E IF+ G +
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPYP 261
Query: 290 NVSLAAYFV-----HSMRK-----NRLYHILDD 312
+ + F H M K N LY ++ D
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRD 294
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K E F+ E ++ ++ H +V+L
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 70
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASS 198
E +V E++ G+L L + + +Y L +A ++A +AY+
Sbjct: 71 VVSEEPI-XIVTEYMSKGSLLDFL--KGETGKY-LRLPQLVDMAAQIASGMAYVERMN-- 124
Query: 199 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 258
HRD+++ NIL+ E KVADFG ++ I ++ + + PE + T
Sbjct: 125 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFT 183
Query: 259 DKSDVYSFGVVLVELLT-GKKP 279
KSDV+SFG++L EL T G+ P
Sbjct: 184 IKSDVWSFGILLTELTTKGRVP 205
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 109/209 (52%), Gaps = 15/209 (7%)
Query: 76 NRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL-EEFINEIFILSQINHRNVV 134
++ LG G GTV KG + +++ K+ ++ L +E + E ++ Q+++ +V
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 135 KLLGCCLETEFPLLVYEFIPNGTLYQHLH-DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+++G C E E +LV E G L ++L +RH ++ + + +V+ + YL
Sbjct: 76 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYLE 128
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEY 251
S HRD+ + N+LL ++ AK++DFG SK + D+ + G + + PE
Sbjct: 129 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPEC 185
Query: 252 HQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + KSDV+SFGV++ E + G+KP
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 44/273 (16%)
Query: 71 NHFNVNRILGQGGQGTVY--------KGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
+ + + LG+G G V K + ++ +AVK K DD L + ++E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 91
Query: 123 FILSQIN-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL-----------HDRHQNEE 170
++ I H+N++ LLG C + ++ E+ G L ++L +D ++ E
Sbjct: 92 EMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 171 YPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI- 229
+T++ ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 230 AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+D TT + ++ PE T +SDV+SFGV++ E IF+ G +
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPYP 261
Query: 290 NVSLAAYFV-----HSMRK-----NRLYHILDD 312
+ + F H M K N LY ++ D
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRD 294
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 18/230 (7%)
Query: 73 FNVNRILGQGGQGTVYKGRLED-GRIIAVK--KSKLAVDDEELYKLEEFINEIFILSQIN 129
F++ R++G+G V RL+ RI A+K K +L DDE++ ++ E + Q +
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQ---TEKHVFEQAS 78
Query: 130 HRNVVKLLGCCLETEFPLL-VYEFIPNGTLYQHLH-DRHQNEEYPLTWEMRFRVAIEVAG 187
+ + L C +TE L V E++ G L H+ R EE+ RF A E++
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEH-----ARFYSA-EISL 132
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 247
AL YLH I +RD+K N+LLD K+ D+G K + T+ GT Y+
Sbjct: 133 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYI 188
Query: 248 DPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYF 297
PE + D ++ GV++ E++ G+ P G++ + + Y
Sbjct: 189 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 238
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 98/216 (45%), Gaps = 14/216 (6%)
Query: 73 FNVNRILGQGGQGTVYKGR-LEDGRIIAVK-KSKLAVDDEELYKLEEFINEIFILSQINH 130
F +ILG+G TV R L R A+K K + E K+ E ++S+++H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 96
Query: 131 RNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALA 190
VKL C + E + NG L +++ +E RF A E+ AL
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTA-EIVSALE 151
Query: 191 YLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTFGYLDP 249
YLH I HRD+K NILL+E ++ DFGT+K ++ + GT Y+ P
Sbjct: 152 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
Query: 250 EYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
E SD+++ G ++ +L+ G P F GN
Sbjct: 209 ELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 243
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 44/273 (16%)
Query: 71 NHFNVNRILGQGGQGTVY--------KGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
+ + + LG+G G V K + ++ +AVK K DD L + ++E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 91
Query: 123 FILSQIN-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL-----------HDRHQNEE 170
++ I H+N++ LLG C + ++ E+ G L ++L +D ++ E
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 171 YPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI- 229
+T++ ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 230 AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+D TT + ++ PE T +SDV+SFGV++ E IF+ G +
Sbjct: 209 NIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPYP 261
Query: 290 NVSLAAYFV-----HSMRK-----NRLYHILDD 312
+ + F H M K N LY ++ D
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRD 294
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 116/267 (43%), Gaps = 40/267 (14%)
Query: 75 VNRILGQGGQGTVYKGRL------EDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
+ + LG+G G V + R+ V L D E L + I+E+ ++ I
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE-KDLSDLISEMEMMKMI 90
Query: 129 N-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRH-----------QNEEYPLTWE 176
H+N++ LLG C + ++ E+ G L ++L R N E L+ +
Sbjct: 91 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 150
Query: 177 MRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTH 235
A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 236 VTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAA 295
TT + ++ PE T +SDV+SFGV+L E IF+ G + V +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE-------IFTLGGSPYPGVPVEE 260
Query: 296 YFV-----HSMRK-----NRLYHILDD 312
F H M K N LY ++ D
Sbjct: 261 LFKLLKEGHRMDKPSNCTNELYMMMRD 287
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 116/267 (43%), Gaps = 40/267 (14%)
Query: 75 VNRILGQGGQGTVYKGRL------EDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
+ + LG+G G V + R+ V L D E L + I+E+ ++ I
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE-KDLSDLISEMEMMKMI 90
Query: 129 N-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRH-----------QNEEYPLTWE 176
H+N++ LLG C + ++ E+ G L ++L R N E L+ +
Sbjct: 91 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSK 150
Query: 177 MRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTH 235
A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 236 VTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAA 295
TT + ++ PE T +SDV+SFGV+L E IF+ G + V +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE-------IFTLGGSPYPGVPVEE 260
Query: 296 YFV-----HSMRK-----NRLYHILDD 312
F H M K N LY ++ D
Sbjct: 261 LFKLLKEGHRMDKPSNCTNELYMMMRD 287
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 44/273 (16%)
Query: 71 NHFNVNRILGQGGQGTVY--------KGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
+ + + LG+G G V K + ++ +AVK K DD L + ++E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 91
Query: 123 FILSQIN-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL-----------HDRHQNEE 170
++ I H+N++ LLG C + ++ E+ G L ++L +D ++ E
Sbjct: 92 EMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 171 YPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI- 229
+T++ ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 230 AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+D TT + ++ PE T +SDV+SFGV++ E IF+ G +
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPYP 261
Query: 290 NVSLAAYFV-----HSMRK-----NRLYHILDD 312
+ + F H M K N LY ++ D
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRD 294
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 18/230 (7%)
Query: 73 FNVNRILGQGGQGTVYKGRLED-GRIIAVK--KSKLAVDDEELYKLEEFINEIFILSQIN 129
F++ R++G+G V RL+ RI A+K K +L DDE++ ++ E + Q +
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQ---TEKHVFEQAS 63
Query: 130 HRNVVKLLGCCLETEFPLL-VYEFIPNGTLYQHLH-DRHQNEEYPLTWEMRFRVAIEVAG 187
+ + L C +TE L V E++ G L H+ R EE+ RF A E++
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEH-----ARFYSA-EISL 117
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 247
AL YLH I +RD+K N+LLD K+ D+G K + T+ GT Y+
Sbjct: 118 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYI 173
Query: 248 DPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYF 297
PE + D ++ GV++ E++ G+ P G++ + + Y
Sbjct: 174 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 223
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 110/209 (52%), Gaps = 15/209 (7%)
Query: 76 NRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL-EEFINEIFILSQINHRNVV 134
++ LG G GTV KG + +++ K+ ++ L +E + E ++ Q+++ +V
Sbjct: 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 433
Query: 135 KLLGCCLETEFPLLVYEFIPNGTLYQHLH-DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+++G C E E +LV E G L ++L +RH ++ + + +V+ + YL
Sbjct: 434 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYLE 486
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEY 251
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 487 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 543
Query: 252 HQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + KSDV+SFGV++ E + G+KP
Sbjct: 544 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 13/214 (6%)
Query: 72 HFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINH 130
+F + + +G+G VY+ L DG +A+KK ++ D + + I EI +L Q+NH
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQI-FDLMDAKARADCIKEIDLLKQLNH 91
Query: 131 RNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL-HDRHQNEEYP--LTWEMRFRVAIEVAG 187
NV+K +E +V E G L + + H + Q P W + +++
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW----KYFVQLCS 147
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 247
AL ++HS + HRDIK N+ + K+ D G +F + +T + GT Y+
Sbjct: 148 ALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFS-SKTTAAHSLVGTPYYM 203
Query: 248 DPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 281
PE + KSD++S G +L E+ + P +
Sbjct: 204 SPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY 237
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 116/267 (43%), Gaps = 40/267 (14%)
Query: 75 VNRILGQGGQGTVYKGRL------EDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
+ + LG+G G V + R+ V L D E L + I+E+ ++ I
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE-KDLSDLISEMEMMKMI 90
Query: 129 N-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRH-----------QNEEYPLTWE 176
H+N++ LLG C + ++ E+ G L ++L R N E L+ +
Sbjct: 91 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 150
Query: 177 MRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTH 235
A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 236 VTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAA 295
TT + ++ PE T +SDV+SFGV+L E IF+ G + V +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE-------IFTLGGSPYPGVPVEE 260
Query: 296 YFV-----HSMRK-----NRLYHILDD 312
F H M K N LY ++ D
Sbjct: 261 LFKLLKEGHRMDKPSNCTNELYMMMRD 287
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 116/267 (43%), Gaps = 40/267 (14%)
Query: 75 VNRILGQGGQGTVYKGRL------EDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
+ + LG+G G V + R+ V L D E L + I+E+ ++ I
Sbjct: 21 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE-KDLSDLISEMEMMKMI 79
Query: 129 N-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRH-----------QNEEYPLTWE 176
H+N++ LLG C + ++ E+ G L ++L R N E L+ +
Sbjct: 80 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 139
Query: 177 MRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTH 235
A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 140 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 196
Query: 236 VTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAA 295
TT + ++ PE T +SDV+SFGV+L E IF+ G + V +
Sbjct: 197 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE-------IFTLGGSPYPGVPVEE 249
Query: 296 YFV-----HSMRK-----NRLYHILDD 312
F H M K N LY ++ D
Sbjct: 250 LFKLLKEGHRMDKPSNCTNELYMMMRD 276
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 116/267 (43%), Gaps = 40/267 (14%)
Query: 75 VNRILGQGGQGTVYKGRL------EDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
+ + LG+G G V + R+ V L D E L + I+E+ ++ I
Sbjct: 25 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE-KDLSDLISEMEMMKMI 83
Query: 129 N-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRH-----------QNEEYPLTWE 176
H+N++ LLG C + ++ E+ G L ++L R N E L+ +
Sbjct: 84 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 143
Query: 177 MRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTH 235
A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 144 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 200
Query: 236 VTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAA 295
TT + ++ PE T +SDV+SFGV+L E IF+ G + V +
Sbjct: 201 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE-------IFTLGGSPYPGVPVEE 253
Query: 296 YFV-----HSMRK-----NRLYHILDD 312
F H M K N LY ++ D
Sbjct: 254 LFKLLKEGHRMDKPSNCTNELYMMMRD 280
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 126/281 (44%), Gaps = 54/281 (19%)
Query: 79 LGQGGQGTVYKGRLEDGR---IIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVK 135
+G+G G V+KG D R ++A+K L ++E+ +++ EI +LSQ + V K
Sbjct: 31 IGKGSFGEVFKGI--DNRTQQVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSSYVTK 85
Query: 136 LLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAI---EVAGALAYL 192
G L+ ++ E++ G+ L +E F++A E+ L YL
Sbjct: 86 YYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDE---------FQIATMLKEILKGLDYL 136
Query: 193 HSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYH 252
HS HRDIK+ N+LL E+ K+ADFG + + Q T + GT ++ PE
Sbjct: 137 HSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVI 192
Query: 253 QSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMR------KNRL 306
Q S K+D++S G+ +EL G+ P N+ +H MR KN
Sbjct: 193 QQSAYDSKADIWSLGITAIELAKGEPP-----NSD----------MHPMRVLFLIPKNNP 237
Query: 307 YHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
++ D +F + CL+ + RPT +E+
Sbjct: 238 PTLVGDFTK---------SFKEFIDACLNKDPSFRPTAKEL 269
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 116/267 (43%), Gaps = 40/267 (14%)
Query: 75 VNRILGQGGQGTVYKGRL------EDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
+ + LG+G G V + R+ V L D E L + I+E+ ++ I
Sbjct: 17 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE-KDLSDLISEMEMMKMI 75
Query: 129 N-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRH-----------QNEEYPLTWE 176
H+N++ LLG C + ++ E+ G L ++L R N E L+ +
Sbjct: 76 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 135
Query: 177 MRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTH 235
A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 136 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 192
Query: 236 VTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAA 295
TT + ++ PE T +SDV+SFGV+L E IF+ G + V +
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE-------IFTLGGSPYPGVPVEE 245
Query: 296 YFV-----HSMRK-----NRLYHILDD 312
F H M K N LY ++ D
Sbjct: 246 LFKLLKEGHRMDKPSNCTNELYMMMRD 272
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 110/209 (52%), Gaps = 15/209 (7%)
Query: 76 NRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKL-EEFINEIFILSQINHRNVV 134
++ LG G GTV KG + +++ K+ ++ L +E + E ++ Q+++ +V
Sbjct: 375 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 434
Query: 135 KLLGCCLETEFPLLVYEFIPNGTLYQHLH-DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+++G C E E +LV E G L ++L +RH ++ + + +V+ + YL
Sbjct: 435 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYLE 487
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG--YLDPEY 251
S HRD+ + N+LL ++ AK++DFG SK + D+ + + G + + PE
Sbjct: 488 E---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 544
Query: 252 HQSSQLTDKSDVYSFGVVLVELLT-GKKP 279
+ + KSDV+SFGV++ E + G+KP
Sbjct: 545 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 116/267 (43%), Gaps = 40/267 (14%)
Query: 75 VNRILGQGGQGTVYKGRL------EDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
+ + LG+G G V + R+ V L D E L + I+E+ ++ I
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE-KDLSDLISEMEMMKMI 131
Query: 129 N-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRH-----------QNEEYPLTWE 176
H+N++ LLG C + ++ E+ G L ++L R N E L+ +
Sbjct: 132 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 177 MRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTH 235
A +VA + YL AS HRD+ + N+L+ E K+ADFG ++ I +D
Sbjct: 192 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 248
Query: 236 VTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAA 295
TT + ++ PE T +SDV+SFGV+L E IF+ G + V +
Sbjct: 249 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE-------IFTLGGSPYPGVPVEE 301
Query: 296 YFV-----HSMRK-----NRLYHILDD 312
F H M K N LY ++ D
Sbjct: 302 LFKLLKEGHRMDKPSNCTNELYMMMRD 328
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 18/230 (7%)
Query: 73 FNVNRILGQGGQGTVYKGRLED-GRIIAVK--KSKLAVDDEELYKLEEFINEIFILSQIN 129
F++ R++G+G V RL+ RI A+K K +L DDE++ ++ E + Q +
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQ---TEKHVFEQAS 67
Query: 130 HRNVVKLLGCCLETEFPLL-VYEFIPNGTLYQHLH-DRHQNEEYPLTWEMRFRVAIEVAG 187
+ + L C +TE L V E++ G L H+ R EE+ RF A E++
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEH-----ARFYSA-EISL 121
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 247
AL YLH I +RD+K N+LLD K+ D+G K + T+ GT Y+
Sbjct: 122 ALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYI 177
Query: 248 DPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYF 297
PE + D ++ GV++ E++ G+ P G++ + + Y
Sbjct: 178 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 227
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 140/324 (43%), Gaps = 52/324 (16%)
Query: 49 SYDG---SVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGRL-----EDGRI-IA 99
SY+G + ID +L +++ + N+ + LG G G V + ED + +A
Sbjct: 21 SYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVA 80
Query: 100 VKKSKLAVDDEELYKLEEFINEIFILSQI-NHRNVVKLLGCCLETEFPLLVYEFIPNGTL 158
VK K +E E ++E+ I+S + H N+V LLG C L++ E+ G L
Sbjct: 81 VKMLKSTAHADEK---EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 159 YQHLHDRHQNEEYPLTWEMRFRVAI---------EVAGALAYLHSGASSPIYHRDIKSTN 209
L + + E + + A +VA +A+L AS HRD+ + N
Sbjct: 138 LNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARN 194
Query: 210 ILLDERYRAKVADFGTSKFIAMDQTH-VTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGV 268
+LL + AK+ DFG ++ I D + V + ++ PE T +SDV+S+G+
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
Query: 269 VLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFA- 327
+L E IFS G + + ++ Y ++ D G + AFA
Sbjct: 255 LLWE-------IFSLGLNPYPGI---------LVNSKFYKLVKD-----GYQMAQPAFAP 293
Query: 328 ----NLAERCLDLNGKKRPTMEEV 347
++ + C L RPT +++
Sbjct: 294 KNIYSIMQACWALEPTHRPTFQQI 317
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K E F+ E ++ +I H +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKIRHEKLVQLYA 80
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
+E P+ +V E++ G+L L + + +Y L +A ++A +AY+
Sbjct: 81 VV--SEEPIYIVTEYMSKGSLLDFL--KGEMGKY-LRLPQLVDMAAQIASGMAYVERMN- 134
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ E KVADFG ++ I ++ + + PE +
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L EL T G+ P
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVP 215
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K E F+ E ++ ++ H +V+L
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-----AFLQEAQVMKKLRHEKLVQLYA 73
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
+ +E P+ +V E++ G+L L + + +Y L +A ++A +AY+
Sbjct: 74 --VVSEEPIYIVTEYMSKGSLLDFL--KGETGKY-LRLPQLVDMAAQIASGMAYVERMN- 127
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ E KVADFG ++ I ++ + + PE +
Sbjct: 128 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 185
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L EL T G+ P
Sbjct: 186 TIKSDVWSFGILLTELTTKGRVP 208
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 44/273 (16%)
Query: 71 NHFNVNRILGQGGQGTVY--------KGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
+ + + LG+G G V K + ++ +AVK K DD L + ++E+
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 80
Query: 123 FILSQIN-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL-----------HDRHQNEE 170
++ I H+N++ LLG C + ++ E+ G L ++L +D ++ E
Sbjct: 81 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 140
Query: 171 YPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI- 229
+T++ ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 141 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 197
Query: 230 AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+D TT + ++ PE T +SDV+SFGV++ E IF+ G +
Sbjct: 198 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPYP 250
Query: 290 NVSLAAYFV-----HSMRK-----NRLYHILDD 312
+ + F H M K N LY ++ D
Sbjct: 251 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRD 283
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 44/273 (16%)
Query: 71 NHFNVNRILGQGGQGTVY--------KGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
+ + + LG+G G V K + ++ +AVK K DD L + ++E+
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 83
Query: 123 FILSQIN-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL-----------HDRHQNEE 170
++ I H+N++ LLG C + ++ E+ G L ++L +D ++ E
Sbjct: 84 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 143
Query: 171 YPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI- 229
+T++ ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 144 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 200
Query: 230 AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+D TT + ++ PE T +SDV+SFGV++ E IF+ G +
Sbjct: 201 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPYP 253
Query: 290 NVSLAAYFV-----HSMRK-----NRLYHILDD 312
+ + F H M K N LY ++ D
Sbjct: 254 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRD 286
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K E F+ E ++ ++ H +V+L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
+E P+ +V E++ G+L L + + +Y L +A ++A +AY+
Sbjct: 247 VV--SEEPIYIVTEYMSKGSLLDFL--KGETGKY-LRLPQLVDMAAQIASGMAYVERMN- 300
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ E KVADFG ++ I ++ + + PE +
Sbjct: 301 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L EL T G+ P
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVP 381
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 44/273 (16%)
Query: 71 NHFNVNRILGQGGQGTVY--------KGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
+ + + LG+G G V K + ++ +AVK K DD L + ++E+
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 137
Query: 123 FILSQIN-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL-----------HDRHQNEE 170
++ I H+N++ LLG C + ++ E+ G L ++L +D ++ E
Sbjct: 138 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 197
Query: 171 YPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI- 229
+T++ ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 198 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 254
Query: 230 AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+D TT + ++ PE T +SDV+SFGV++ E IF+ G +
Sbjct: 255 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPYP 307
Query: 290 NVSLAAYFV-----HSMRK-----NRLYHILDD 312
+ + F H M K N LY ++ D
Sbjct: 308 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRD 340
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K E F+ E ++ ++ H +V+L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
+E P+ +V E++ G+L L + + +Y L +A ++A +AY+
Sbjct: 247 VV--SEEPIYIVTEYMSKGSLLDFL--KGETGKY-LRLPQLVDMAAQIASGMAYVERMN- 300
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ E KVADFG ++ I ++ + + PE +
Sbjct: 301 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L EL T G+ P
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVP 381
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K E F+ E ++ ++ H +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
+E P+ +V E++ G+L L + + +Y L +A ++A +AY+
Sbjct: 81 VV--SEEPIYIVIEYMSKGSLLDFL--KGEMGKY-LRLPQLVDMAAQIASGMAYVERMN- 134
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ E KVADFG ++ I ++ + + PE +
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRF 192
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L EL T G+ P
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVP 215
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 123/273 (45%), Gaps = 44/273 (16%)
Query: 71 NHFNVNRILGQGGQGTVY--------KGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
+ + + LG+G G V K + ++ +AVK K DD L + ++E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 91
Query: 123 FILSQIN-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL-----------HDRHQNEE 170
++ I H+N++ LLG C + ++ E+ G L ++L +D ++ E
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 171 YPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI- 229
+T++ ++A + YL AS HRD+ + N+L+ E ++ADFG ++ I
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDIN 208
Query: 230 AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+D TT + ++ PE T +SDV+SFGV++ E IF+ G +
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPYP 261
Query: 290 NVSLAAYFV-----HSMRK-----NRLYHILDD 312
+ + F H M K N LY ++ D
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRD 294
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 140/324 (43%), Gaps = 52/324 (16%)
Query: 49 SYDG---SVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGRL-----EDGRI-IA 99
SY+G + ID +L +++ + N+ + LG G G V + ED + +A
Sbjct: 21 SYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVA 80
Query: 100 VKKSKLAVDDEELYKLEEFINEIFILSQI-NHRNVVKLLGCCLETEFPLLVYEFIPNGTL 158
VK K +E E ++E+ I+S + H N+V LLG C L++ E+ G L
Sbjct: 81 VKMLKSTAHADEK---EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 137
Query: 159 YQHLHDRHQNEEYPLTWEMR---------FRVAIEVAGALAYLHSGASSPIYHRDIKSTN 209
L + + E + + + +VA +A+L AS HRD+ + N
Sbjct: 138 LNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARN 194
Query: 210 ILLDERYRAKVADFGTSKFIAMDQTH-VTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGV 268
+LL + AK+ DFG ++ I D + V + ++ PE T +SDV+S+G+
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
Query: 269 VLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFA- 327
+L E IFS G + + ++ Y ++ D G + AFA
Sbjct: 255 LLWE-------IFSLGLNPYPGI---------LVNSKFYKLVKD-----GYQMAQPAFAP 293
Query: 328 ----NLAERCLDLNGKKRPTMEEV 347
++ + C L RPT +++
Sbjct: 294 KNIYSIMQACWALEPTHRPTFQQI 317
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 44/273 (16%)
Query: 71 NHFNVNRILGQGGQGTVY--------KGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
+ + + LG+G G V K + ++ +AVK K DD L + ++E+
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 78
Query: 123 FILSQIN-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL-----------HDRHQNEE 170
++ I H+N++ LLG C + ++ E+ G L ++L +D ++ E
Sbjct: 79 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 138
Query: 171 YPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI- 229
+T++ ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 139 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDIN 195
Query: 230 AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+D TT + ++ PE T +SDV+SFGV++ E IF+ G +
Sbjct: 196 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPYP 248
Query: 290 NVSLAAYFV-----HSMRK-----NRLYHILDD 312
+ + F H M K N LY ++ D
Sbjct: 249 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRD 281
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 126/285 (44%), Gaps = 31/285 (10%)
Query: 73 FNVNRILGQGGQGTVYKGRLEDGR----IIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
F ++++LG+G G V+ + I A+KK + +DD+ +E + E +LS
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDD----VECTMVEKRVLSLA 74
Query: 129 NHRNVVKLLGCCLET-EFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
+ + C +T E V E++ G L H+ H+ + T+ A E+
Sbjct: 75 WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF-----YAAEIIL 129
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 247
L +LHS I +RD+K NILLD+ K+ADFG K + T GT Y+
Sbjct: 130 GLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNXFCGTPDYI 185
Query: 248 DPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLY 307
PE + D +SFGV+L E+L G+ P G +E HS+R + +
Sbjct: 186 APEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF--HGQDEEE-------LFHSIRMDNPF 236
Query: 308 HILDDQVMKLGKKNQIVAFANLAERCLDLNG--KKRPTMEEVSME 350
+ + K K + F E+ L + G ++ P E++ E
Sbjct: 237 Y--PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWE 279
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 133/314 (42%), Gaps = 43/314 (13%)
Query: 55 IDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKG------RLEDGRIIAVKKSKLAVD 108
ID +L + + N + + LG G G V + + + +AVK K
Sbjct: 30 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK---P 86
Query: 109 DEELYKLEEFINEIFILSQI-NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQ 167
L + E ++E+ +LS + NH N+V LLG C L++ E+ G L L +
Sbjct: 87 SAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRD 146
Query: 168 N----EEYPLTWEMRF---------RVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDE 214
+ + P E + +VA +A+L AS HRD+ + NILL
Sbjct: 147 SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTH 203
Query: 215 RYRAKVADFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVEL 273
K+ DFG ++ I D +V + ++ PE + T +SDV+S+G+ L EL
Sbjct: 204 GRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 263
Query: 274 LTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERC 333
FS G++ + + + F Y ++ + L ++ ++ + C
Sbjct: 264 -------FSLGSSPYPGMPVDSKF---------YKMIKEGFRMLSPEHAPAEMYDIMKTC 307
Query: 334 LDLNGKKRPTMEEV 347
D + KRPT +++
Sbjct: 308 WDADPLKRPTFKQI 321
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K E F+ E ++ ++ H +V+L
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 329
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASS 198
E +V E++ G+L L + + +Y L +A ++A +AY+
Sbjct: 330 VVSEEPI-YIVTEYMSKGSLLDFL--KGETGKY-LRLPQLVDMAAQIASGMAYVERMN-- 383
Query: 199 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 258
HRD+++ NIL+ E KVADFG ++ I ++ + + PE + T
Sbjct: 384 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT 442
Query: 259 DKSDVYSFGVVLVELLT-GKKP 279
KSDV+SFG++L EL T G+ P
Sbjct: 443 IKSDVWSFGILLTELTTKGRVP 464
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 14/225 (6%)
Query: 69 ATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQ 127
+++ F LG G TVYKG G +A+K+ KL D E I EI ++ +
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKL---DSEEGTPSTAIREISLMKE 59
Query: 128 INHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRH-QNEEYPLTWEMRFRVAIEV 185
+ H N+V+L + TE L LV+EF+ N L +++ R N L + ++
Sbjct: 60 LKHENIVRLYDV-IHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQL 117
Query: 186 AGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG 245
LA+ H I HRD+K N+L+++R + K+ DFG ++ + ++++ T
Sbjct: 118 LQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLW 173
Query: 246 YLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQE 289
Y P+ S+ S D++S G +L E++TG KP+F N ++
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITG-KPLFPGTNDEEQ 217
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 140/334 (41%), Gaps = 61/334 (18%)
Query: 49 SYDG---SVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGRL-----EDGRI-IA 99
SY+G + ID +L +++ + N+ + LG G G V + ED + +A
Sbjct: 6 SYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVA 65
Query: 100 VKKSKLAVDDEELYKLEEFINEIFILSQIN-HRNVVKLLGCCLETEFPLLVYEFIPNGTL 158
VK K +E E ++E+ I+S + H N+V LLG C L++ E+ G L
Sbjct: 66 VKMLKSTAHADEK---EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL 122
Query: 159 YQHLHDRHQ------------------NEEYPLTWEMRFRVAIEVAGALAYLHSGASSPI 200
L + + + PL + +VA +A+L AS
Sbjct: 123 LNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNC 179
Query: 201 YHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTH-VTTKIQGTFGYLDPEYHQSSQLTD 259
HRD+ + N+LL + AK+ DFG ++ I D + V + ++ PE T
Sbjct: 180 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV 239
Query: 260 KSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDDQVMKLGK 319
+SDV+S+G++L E IFS G + + ++ Y ++ D G
Sbjct: 240 QSDVWSYGILLWE-------IFSLGLNPYPGI---------LVNSKFYKLVKD-----GY 278
Query: 320 KNQIVAFA-----NLAERCLDLNGKKRPTMEEVS 348
+ AFA ++ + C L RPT +++
Sbjct: 279 QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQIC 312
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K E F+ E ++ ++ H +V+L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
+E P+ +V E++ G+L L + + +Y L +A ++A +AY+
Sbjct: 247 VV--SEEPIYIVGEYMSKGSLLDFL--KGETGKY-LRLPQLVDMAAQIASGMAYVERMN- 300
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ E KVADFG ++ I ++ + + PE +
Sbjct: 301 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L EL T G+ P
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVP 381
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K E F+ E ++ ++ H +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
+ +E P+ +V E++ G+L L + + +Y L +A ++A +AY+
Sbjct: 81 --VVSEEPIYIVCEYMSKGSLLDFL--KGEMGKY-LRLPQLVDMAAQIASGMAYVERMN- 134
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ E KVADFG ++ I ++ + + PE +
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L EL T G+ P
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVP 215
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 28/212 (13%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G VYK + ++ ++A K +D + +LE+++ EI IL+ +H N+VKLL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAK---VIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASS 198
++ EF G + + + E PLT V + AL YLH
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLEL----ERPLTESQIQVVCKQTLDALNYLHDNK-- 155
Query: 199 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ------GTFGYLDPEYH 252
I HRD+K+ NIL K+ADFG S T IQ GT ++ PE
Sbjct: 156 -IIHRDLKAGNILFTLDGDIKLADFGVS-------AKNTRXIQRRDSFIGTPYWMAPEVV 207
Query: 253 QSSQLTD-----KSDVYSFGVVLVELLTGKKP 279
D K+DV+S G+ L+E+ + P
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 28/212 (13%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G VYK + ++ ++A K +D + +LE+++ EI IL+ +H N+VKLL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAK---VIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASS 198
++ EF G + + + E PLT V + AL YLH
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLEL----ERPLTESQIQVVCKQTLDALNYLHDNK-- 155
Query: 199 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ------GTFGYLDPEYH 252
I HRD+K+ NIL K+ADFG S T IQ GT ++ PE
Sbjct: 156 -IIHRDLKAGNILFTLDGDIKLADFGVS-------AKNTRXIQRRDXFIGTPYWMAPEVV 207
Query: 253 QSSQLTD-----KSDVYSFGVVLVELLTGKKP 279
D K+DV+S G+ L+E+ + P
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 28/212 (13%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G VYK + ++ ++A K +D + +LE+++ EI IL+ +H N+VKLL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAK---VIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASS 198
++ EF G + + + E PLT V + AL YLH
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLEL----ERPLTESQIQVVCKQTLDALNYLHDNK-- 155
Query: 199 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ------GTFGYLDPEYH 252
I HRD+K+ NIL K+ADFG S T IQ GT ++ PE
Sbjct: 156 -IIHRDLKAGNILFTLDGDIKLADFGVS-------AKNTRTIQRRDSFIGTPYWMAPEVV 207
Query: 253 QSSQLTD-----KSDVYSFGVVLVELLTGKKP 279
D K+DV+S G+ L+E+ + P
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K E F+ E ++ ++ H +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
+E P+ +V E++ G+L L + + +Y L +A ++A +AY+
Sbjct: 81 VV--SEEPIYIVIEYMSKGSLLDFL--KGEMGKY-LRLPQLVDMAAQIASGMAYVERMN- 134
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ E KVADFG ++ I ++ + + PE +
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L EL T G+ P
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVP 215
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 131/291 (45%), Gaps = 56/291 (19%)
Query: 72 HFNVNRILGQGGQGTVYKGRLE----DGRIIAVKKSKLAVDDEEL--YKLEEFINEIFIL 125
H R+L G+G K +L GR +A+K +D +L L++ E+ I+
Sbjct: 10 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIK----IIDKTQLNPTSLQKLFREVRIM 65
Query: 126 SQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHL--HDRHQNEEYPLTWEMRFRVA 182
+NH N+VKL +ETE L L+ E+ G ++ +L H R + +E +FR
Sbjct: 66 KILNHPNIVKLFEV-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEA----RSKFR-- 118
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ- 241
++ A+ Y H I HRD+K+ N+LLD K+ADFG S ++ V K+
Sbjct: 119 -QIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFS-----NEFTVGGKLDT 169
Query: 242 --GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ--ENVSLAAY 296
G+ Y PE Q + DV+S GV+L L++G P F N + E V Y
Sbjct: 170 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP-FDGQNLKELRERVLRGKY 228
Query: 297 FVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ Y D + NL +R L LN KR T+E++
Sbjct: 229 RIP------FYMSTDCE--------------NLLKRFLVLNPIKRGTLEQI 259
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K E F+ E ++ ++ H +V+L
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 71
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
+ +E P+ +V E++ G+L L + + +Y L +A ++A +AY+
Sbjct: 72 --VVSEEPIYIVTEYMSKGSLLDFL--KGEMGKY-LRLPQLVDMAAQIASGMAYVERMN- 125
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ E KVADFG ++ I ++ + + PE +
Sbjct: 126 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 183
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L EL T G+ P
Sbjct: 184 TIKSDVWSFGILLTELTTKGRVP 206
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K E F+ E ++ ++ H +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
+E P+ +V E++ G+L L + + +Y L +A ++A +AY+
Sbjct: 81 VV--SEEPIYIVTEYMSKGSLLDFL--KGEMGKY-LRLPQLVDMAAQIASGMAYVERMN- 134
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ E KVADFG ++ I ++ + + PE +
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L EL T G+ P
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVP 215
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K E F+ E ++ ++ H +V+L
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-----AFLQEAQVMKKLRHEKLVQLYA 69
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
+ +E P+ +V E++ G+L L + + +Y L +A ++A +AY+
Sbjct: 70 --VVSEEPIYIVTEYMSKGSLLDFL--KGEMGKY-LRLPQLVDMAAQIASGMAYVERMN- 123
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ E KVADFG ++ I ++ + + PE +
Sbjct: 124 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 181
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L EL T G+ P
Sbjct: 182 TIKSDVWSFGILLTELTTKGRVP 204
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 122/257 (47%), Gaps = 24/257 (9%)
Query: 52 GSVIDRCK-LFSSKELDKATNH-----FNVNRILGQGGQGTVYKGRLED-GRIIAVK--K 102
GS I+ K +++E KA++ F++ R++G+G V RL+ RI A++ K
Sbjct: 27 GSGIEEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVK 86
Query: 103 SKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLGCCLETEFPLL-VYEFIPNGTLYQH 161
+L DDE++ ++ E + Q ++ + L C +TE L V E++ G L H
Sbjct: 87 KELVNDDEDIDWVQ---TEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFH 143
Query: 162 LH-DRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKV 220
+ R EE+ RF A E++ AL YLH I +RD+K N+LLD K+
Sbjct: 144 MQRQRKLPEEH-----ARFYSA-EISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKL 194
Query: 221 ADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 280
D+G K + T+ GT Y+ PE + D ++ GV++ E++ G+ P
Sbjct: 195 TDYGMCK-EGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
Query: 281 FSTGNTSQENVSLAAYF 297
G++ + + Y
Sbjct: 254 DIVGSSDNPDQNTEDYL 270
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K E F+ E ++ ++ H +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
+ +E P+ +V E++ G L L + + +Y L +A ++A +AY+
Sbjct: 81 --VVSEEPIYIVMEYMSKGCLLDFL--KGEMGKY-LRLPQLVDMAAQIASGMAYVERMN- 134
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ E KVADFG ++ I ++ + + PE +
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L EL T G+ P
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVP 215
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 130/291 (44%), Gaps = 56/291 (19%)
Query: 72 HFNVNRILGQGGQGTVYKGRLE----DGRIIAVKKSKLAVDDEEL--YKLEEFINEIFIL 125
H R+L G+G K +L GR +A+K +D +L L++ E+ I+
Sbjct: 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIK----IIDKTQLNPTSLQKLFREVRIM 68
Query: 126 SQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHL--HDRHQNEEYPLTWEMRFRVA 182
+NH N+VKL +ETE L L+ E+ G ++ +L H R + +E +FR
Sbjct: 69 KILNHPNIVKLFEV-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEA----RSKFR-- 121
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
++ A+ Y H I HRD+K+ N+LLD K+ADFG S ++ V K+
Sbjct: 122 -QIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFS-----NEFTVGGKLDA 172
Query: 243 TFG---YLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ--ENVSLAAY 296
G Y PE Q + DV+S GV+L L++G P F N + E V Y
Sbjct: 173 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP-FDGQNLKELRERVLRGKY 231
Query: 297 FVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ Y D + NL +R L LN KR T+E++
Sbjct: 232 RIP------FYMSTDCE--------------NLLKRFLVLNPIKRGTLEQI 262
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 93/210 (44%), Gaps = 21/210 (10%)
Query: 77 RILGQGGQGTVY--KGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVV 134
+LG G V+ K RL G++ A+K + ++ NEI +L +I H N+V
Sbjct: 15 EVLGSGAFSEVFLVKQRL-TGKLFALK----CIKKSPAFRDSSLENEIAVLKKIKHENIV 69
Query: 135 KLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHS 194
L T LV + + G L+ + +R E + V +V A+ YLH
Sbjct: 70 TLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDAS-----LVIQQVLSAVKYLHE 124
Query: 195 GASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY 251
I HRD+K N+L +E + + DFG SK M+Q + + GT GY+ PE
Sbjct: 125 NG---IVHRDLKPENLLYLTPEENSKIMITDFGLSK---MEQNGIMSTACGTPGYVAPEV 178
Query: 252 HQSSQLTDKSDVYSFGVVLVELLTGKKPIF 281
+ D +S GV+ LL G P +
Sbjct: 179 LAQKPYSKAVDCWSIGVITYILLCGYPPFY 208
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 134/314 (42%), Gaps = 43/314 (13%)
Query: 55 IDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKG------RLEDGRIIAVKKSKLAVD 108
ID +L + + N + + LG G G V + + + +AVK K +
Sbjct: 7 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA- 65
Query: 109 DEELYKLEEFINEIFILSQI-NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQ 167
L + E ++E+ +LS + NH N+V LLG C L++ E+ G L L +
Sbjct: 66 --HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRD 123
Query: 168 N----EEYPLTWEMRF---------RVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDE 214
+ + P E + +VA +A+L AS HRD+ + NILL
Sbjct: 124 SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTH 180
Query: 215 RYRAKVADFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVEL 273
K+ DFG ++ I D +V + ++ PE + T +SDV+S+G+ L EL
Sbjct: 181 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 240
Query: 274 LTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERC 333
FS G++ + + + F Y ++ + L ++ ++ + C
Sbjct: 241 -------FSLGSSPYPGMPVDSKF---------YKMIKEGFRMLSPEHAPAEMYDIMKTC 284
Query: 334 LDLNGKKRPTMEEV 347
D + KRPT +++
Sbjct: 285 WDADPLKRPTFKQI 298
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 134/314 (42%), Gaps = 43/314 (13%)
Query: 55 IDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKG------RLEDGRIIAVKKSKLAVD 108
ID +L + + N + + LG G G V + + + +AVK K +
Sbjct: 23 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA- 81
Query: 109 DEELYKLEEFINEIFILSQI-NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQ 167
L + E ++E+ +LS + NH N+V LLG C L++ E+ G L L +
Sbjct: 82 --HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRD 139
Query: 168 N----EEYPLTWEMRF---------RVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDE 214
+ + P E + +VA +A+L AS HRD+ + NILL
Sbjct: 140 SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTH 196
Query: 215 RYRAKVADFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVEL 273
K+ DFG ++ I D +V + ++ PE + T +SDV+S+G+ L EL
Sbjct: 197 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 256
Query: 274 LTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERC 333
FS G++ + + + F Y ++ + L ++ ++ + C
Sbjct: 257 -------FSLGSSPYPGMPVDSKF---------YKMIKEGFRMLSPEHAPAEMYDIMKTC 300
Query: 334 LDLNGKKRPTMEEV 347
D + KRPT +++
Sbjct: 301 WDADPLKRPTFKQI 314
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 134/314 (42%), Gaps = 43/314 (13%)
Query: 55 IDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKG------RLEDGRIIAVKKSKLAVD 108
ID +L + + N + + LG G G V + + + +AVK K +
Sbjct: 30 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA- 88
Query: 109 DEELYKLEEFINEIFILSQI-NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQ 167
L + E ++E+ +LS + NH N+V LLG C L++ E+ G L L +
Sbjct: 89 --HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRD 146
Query: 168 N----EEYPLTWEMRF---------RVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDE 214
+ + P E + +VA +A+L AS HRD+ + NILL
Sbjct: 147 SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTH 203
Query: 215 RYRAKVADFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVEL 273
K+ DFG ++ I D +V + ++ PE + T +SDV+S+G+ L EL
Sbjct: 204 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 263
Query: 274 LTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERC 333
FS G++ + + + F Y ++ + L ++ ++ + C
Sbjct: 264 -------FSLGSSPYPGMPVDSKF---------YKMIKEGFRMLSPEHAPAEMYDIMKTC 307
Query: 334 LDLNGKKRPTMEEV 347
D + KRPT +++
Sbjct: 308 WDADPLKRPTFKQI 321
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 72 HFNVNRILGQGGQGTVYKGRLE----DGRIIAVKKSKLAVDDEEL--YKLEEFINEIFIL 125
H R+L G+G K +L G+ +AVK +D +L L++ E+ I+
Sbjct: 12 HIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVK----IIDKTQLNSSSLQKLFREVRIM 67
Query: 126 SQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHL--HDRHQNEEYPLTWEMRFRVA 182
+NH N+VKL +ETE L LV E+ G ++ +L H R + +E +FR
Sbjct: 68 KVLNHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA----RAKFR-- 120
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
++ A+ Y H I HRD+K+ N+LLD K+ADFG S T G
Sbjct: 121 -QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCG 174
Query: 243 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKP 279
+ Y PE Q + DV+S GV+L L++G P
Sbjct: 175 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K E F+ E ++ ++ H +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
+ +E P+ +V E++ G L L + + +Y L +A ++A +AY+
Sbjct: 81 --VVSEEPIYIVTEYMSKGCLLDFL--KGEMGKY-LRLPQLVDMAAQIASGMAYVERMN- 134
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ E KVADFG ++ I ++ + + PE +
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L EL T G+ P
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVP 215
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 134/314 (42%), Gaps = 43/314 (13%)
Query: 55 IDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKG------RLEDGRIIAVKKSKLAVD 108
ID +L + + N + + LG G G V + + + +AVK K +
Sbjct: 25 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA- 83
Query: 109 DEELYKLEEFINEIFILSQI-NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQ 167
L + E ++E+ +LS + NH N+V LLG C L++ E+ G L L +
Sbjct: 84 --HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRD 141
Query: 168 N----EEYPLTWEMRF---------RVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDE 214
+ + P E + +VA +A+L AS HRD+ + NILL
Sbjct: 142 SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTH 198
Query: 215 RYRAKVADFGTSKFIAMDQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVEL 273
K+ DFG ++ I D +V + ++ PE + T +SDV+S+G+ L EL
Sbjct: 199 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 258
Query: 274 LTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERC 333
FS G++ + + + F Y ++ + L ++ ++ + C
Sbjct: 259 -------FSLGSSPYPGMPVDSKF---------YKMIKEGFRMLSPEHAPAEMYDIMKTC 302
Query: 334 LDLNGKKRPTMEEV 347
D + KRPT +++
Sbjct: 303 WDADPLKRPTFKQI 316
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 119/285 (41%), Gaps = 33/285 (11%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKK--SKLAVDDEELYKLEE---F 118
++L + V +++G+G G V R + R + K SK E+ K + F
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKF-----EMIKRSDSAFF 121
Query: 119 INEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMR 178
E I++ N VV+L + + +V E++P G L + N + P W R
Sbjct: 122 WEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM----SNYDVPEKW-AR 176
Query: 179 FRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT 238
F A EV AL +HS HRD+K N+LLD+ K+ADFGT + +
Sbjct: 177 FYTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD 232
Query: 239 KIQGTFGYLDPEYHQSSQLTD-----KSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 293
GT Y+ PE + SQ D + D +S GV L E+L G P ++ SL
Sbjct: 233 TAVGTPDYISPEVLK-SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--------SL 283
Query: 294 AAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNG 338
+ M DD + KN I AF E L NG
Sbjct: 284 VGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNG 328
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 72 HFNVNRILGQGGQGTVYKGRLE----DGRIIAVKKSKLAVDDEEL--YKLEEFINEIFIL 125
H R+L G+G K +L G+ +AVK +D +L L++ E+ I+
Sbjct: 12 HIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVK----IIDKTQLNSSSLQKLFREVRIM 67
Query: 126 SQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHL--HDRHQNEEYPLTWEMRFRVA 182
+NH N+VKL +ETE L LV E+ G ++ +L H R + +E +FR
Sbjct: 68 KVLNHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA----RAKFR-- 120
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
++ A+ Y H I HRD+K+ N+LLD K+ADFG S T G
Sbjct: 121 -QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCG 174
Query: 243 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKP 279
+ Y PE Q + DV+S GV+L L++G P
Sbjct: 175 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 119/285 (41%), Gaps = 33/285 (11%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKK--SKLAVDDEELYKLEE---F 118
++L + V +++G+G G V R + R + K SK E+ K + F
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKF-----EMIKRSDSAFF 121
Query: 119 INEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMR 178
E I++ N VV+L + + +V E++P G L + N + P W R
Sbjct: 122 WEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM----SNYDVPEKW-AR 176
Query: 179 FRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT 238
F A EV AL +HS HRD+K N+LLD+ K+ADFGT + +
Sbjct: 177 FYTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD 232
Query: 239 KIQGTFGYLDPEYHQSSQLTD-----KSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 293
GT Y+ PE + SQ D + D +S GV L E+L G P ++ SL
Sbjct: 233 TAVGTPDYISPEVLK-SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--------SL 283
Query: 294 AAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNG 338
+ M DD + KN I AF E L NG
Sbjct: 284 VGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNG 328
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 122/273 (44%), Gaps = 44/273 (16%)
Query: 71 NHFNVNRILGQGGQGTVY--------KGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
+ + + LG+G G V K + ++ +AVK K DD L + ++E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 91
Query: 123 FILSQIN-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL-----------HDRHQNEE 170
++ I H+N++ LLG C + ++ + G L ++L +D ++ E
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 171 YPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI- 229
+T++ ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 230 AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+D TT + ++ PE T +SDV+SFGV++ E IF+ G +
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPYP 261
Query: 290 NVSLAAYFV-----HSMRK-----NRLYHILDD 312
+ + F H M K N LY ++ D
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRD 294
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 72 HFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEEL--YKLEEFINEIFILSQI 128
++ + + +G+G V R + GR +AVK +D +L L++ E+ I+ +
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVK----IIDKTQLNPTSLQKLFREVRIMKIL 71
Query: 129 NHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHL--HDRHQNEEYPLTWEMRFRVAIEV 185
NH N+VKL +ETE L LV E+ G ++ +L H R + +E +FR ++
Sbjct: 72 NHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA----RAKFR---QI 123
Query: 186 AGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG 245
A+ Y H I HRD+K+ N+LLD K+ADFG S + T G+
Sbjct: 124 VSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT--FCGSPP 178
Query: 246 YLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKP 279
Y PE Q + DV+S GV+L L++G P
Sbjct: 179 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 79 LGQGGQGTVYKGRLEDGR---IIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVK 135
+G+G G V+KG D R ++A+K L ++E+ +++ EI +LSQ + V K
Sbjct: 35 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSPYVTK 89
Query: 136 LLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSG 195
G L+ ++ E++ G+ L E PL + E+ L YLHS
Sbjct: 90 YYGSYLKDTKLWIIMEYLGGGSALDLL------EPGPLDETQIATILREILKGLDYLHSE 143
Query: 196 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 255
HRDIK+ N+LL E K+ADFG + + Q T + GT ++ PE + S
Sbjct: 144 KK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQS 199
Query: 256 QLTDKSDVYSFGVVLVELLTGKKP 279
K+D++S G+ +EL G+ P
Sbjct: 200 AYDSKADIWSLGITAIELARGEPP 223
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 119/285 (41%), Gaps = 33/285 (11%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKK--SKLAVDDEELYKLEE---F 118
++L + V +++G+G G V R + R + K SK E+ K + F
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKF-----EMIKRSDSAFF 116
Query: 119 INEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMR 178
E I++ N VV+L + + +V E++P G L + N + P W R
Sbjct: 117 WEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM----SNYDVPEKW-AR 171
Query: 179 FRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT 238
F A EV AL +HS HRD+K N+LLD+ K+ADFGT + +
Sbjct: 172 FYTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD 227
Query: 239 KIQGTFGYLDPEYHQSSQLTD-----KSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 293
GT Y+ PE + SQ D + D +S GV L E+L G P ++ SL
Sbjct: 228 TAVGTPDYISPEVLK-SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD--------SL 278
Query: 294 AAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNG 338
+ M DD + KN I AF E L NG
Sbjct: 279 VGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNG 323
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 79 LGQGGQGTVYKGRLEDGR---IIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVK 135
+G+G G V+KG D R ++A+K L ++E+ +++ EI +LSQ + V K
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSPYVTK 69
Query: 136 LLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSG 195
G L+ ++ E++ G+ L E PL + E+ L YLHS
Sbjct: 70 YYGSYLKDTKLWIIMEYLGGGSALDLL------EPGPLDETQIATILREILKGLDYLHSE 123
Query: 196 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 255
HRDIK+ N+LL E K+ADFG + + Q T + GT ++ PE + S
Sbjct: 124 KK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQS 179
Query: 256 QLTDKSDVYSFGVVLVELLTGKKP 279
K+D++S G+ +EL G+ P
Sbjct: 180 AYDSKADIWSLGITAIELARGEPP 203
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 104/206 (50%), Gaps = 15/206 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
+G+G G VYK + GRI+A+K+ +L +DE + I EI +L +++H N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKELHHPNIVSLID 86
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAI-EVAGALAYLHSGAS 197
LV+EF+ L + L + + + + ++ + ++ +A+ H
Sbjct: 87 VIHSERCLTLVFEFM-EKDLKKVLDENKTGLQ-----DSQIKIYLYQLLRGVAHCHQHR- 139
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
I HRD+K N+L++ K+ADFG ++ + T ++ T Y P+ S+
Sbjct: 140 --ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKK 196
Query: 258 TDKS-DVYSFGVVLVELLTGKKPIFS 282
S D++S G + E++TG KP+F
Sbjct: 197 YSTSVDIWSIGCIFAEMITG-KPLFP 221
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 104/206 (50%), Gaps = 15/206 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
+G+G G VYK + GRI+A+K+ +L +DE + I EI +L +++H N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKELHHPNIVSLID 86
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAI-EVAGALAYLHSGAS 197
LV+EF+ L + L + + + + ++ + ++ +A+ H
Sbjct: 87 VIHSERCLTLVFEFM-EKDLKKVLDENKTGLQ-----DSQIKIYLYQLLRGVAHCHQHR- 139
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
I HRD+K N+L++ K+ADFG ++ + T ++ T Y P+ S+
Sbjct: 140 --ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKK 196
Query: 258 TDKS-DVYSFGVVLVELLTGKKPIFS 282
S D++S G + E++TG KP+F
Sbjct: 197 YSTSVDIWSIGCIFAEMITG-KPLFP 221
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 115/270 (42%), Gaps = 21/270 (7%)
Query: 79 LGQGGQGTVYK-GRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G V+K G ++A K L + + I E+ +L + N +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQVLHECNSPYIVGFY 70
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G + E + G+L Q L + E ++ +V+I V L YL
Sbjct: 71 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-----QILGKVSIAVIKGLTYLREKHK 125
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
I HRD+K +NIL++ R K+ DFG S + + GT Y+ PE Q +
Sbjct: 126 --IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSYMSPERLQGTHY 180
Query: 258 TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDDQVMKL 317
+ +SD++S G+ LVE+ G+ PI +A + L +I+++ KL
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIF-------ELLDYIVNEPPPKL 233
Query: 318 GKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ F + +CL N +R ++++
Sbjct: 234 PSGVFSLEFQDFVNKCLIKNPAERADLKQL 263
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K E F+ E ++ ++ H +V+L
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 77
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
+E P+ +V E++ G+L L + + +Y L ++ ++A +AY+
Sbjct: 78 VV--SEEPIYIVTEYMNKGSLLDFL--KGETGKY-LRLPQLVDMSAQIASGMAYVERMN- 131
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ E KVADFG ++ I ++ + + PE +
Sbjct: 132 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRF 189
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L EL T G+ P
Sbjct: 190 TIKSDVWSFGILLTELTTKGRVP 212
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 122/273 (44%), Gaps = 44/273 (16%)
Query: 71 NHFNVNRILGQGGQGTVY--------KGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI 122
+ + + LG+G G V K + ++ +AVK K DD L + ++E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 91
Query: 123 FILSQIN-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL-----------HDRHQNEE 170
++ I H+N++ LLG C + ++ + G L ++L +D ++ E
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 171 YPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI- 229
+T++ ++A + YL AS HRD+ + N+L+ E K+ADFG ++ I
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 230 AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+D TT + ++ PE T +SDV+SFGV++ E IF+ G +
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE-------IFTLGGSPYP 261
Query: 290 NVSLAAYFV-----HSMRK-----NRLYHILDD 312
+ + F H M K N LY ++ D
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRD 294
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 72 HFNVNRILGQGGQGTVYKGRLED-----GRIIAVKKSKLAVDDEELYKLEEFINEIFILS 126
H LG+G G+V R + G ++AVK+ + + D++ +F EI IL
Sbjct: 8 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ----RDFQREIQILK 63
Query: 127 QINHRNVVKLLGCCLETEFP--LLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIE 184
++ +VK G P LV E++P+G L L RH+ L + +
Sbjct: 64 ALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQ-RHRAR---LDASRLLLYSSQ 119
Query: 185 VAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT- 243
+ + YL S HRD+ + NIL++ K+ADFG +K + +D+ + G
Sbjct: 120 ICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQS 176
Query: 244 --FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 275
F Y PE + + +SDV+SFGVVL EL T
Sbjct: 177 PIFWYA-PESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K E F+ E ++ ++ H +V+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
+E P+ +V E++ G+L L + + +Y L +A ++A +AY+
Sbjct: 81 VV--SEEPIYIVTEYMSKGSLLDFL--KGEMGKY-LRLPQLVDMAAQIASGMAYVERMN- 134
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+ + NIL+ E KVADFG ++ I ++ + + PE +
Sbjct: 135 --YVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L EL T G+ P
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVP 215
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 130/301 (43%), Gaps = 53/301 (17%)
Query: 71 NHFNVNRILGQGGQGTVYKGRL------EDGRIIAVK--KSKLAVDDEELYKLEEFINEI 122
N+ R +G+G G V++ R E ++AVK K + + D + +F E
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQA-----DFQREA 101
Query: 123 FILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNE------------- 169
++++ ++ N+VKLLG C + L++E++ G L + L +
Sbjct: 102 ALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRA 161
Query: 170 ------EYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADF 223
PL+ + +A +VA +AYL + HRD+ + N L+ E K+ADF
Sbjct: 162 RVSSPGPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADF 218
Query: 224 GTSKFI-AMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
G S+ I + D ++ PE ++ T +SDV+++GVVL E IFS
Sbjct: 219 GLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWE-------IFS 271
Query: 283 TGNTSQENVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRP 342
G L Y+ + + +Y++ D ++ +N + NL C RP
Sbjct: 272 YG--------LQPYYGMA-HEEVIYYVRDGNILAC-PENCPLELYNLMRLCWSKLPADRP 321
Query: 343 T 343
+
Sbjct: 322 S 322
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K E F+ E ++ ++ H +V+L
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYA 77
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
+E P+ +V E++ G+L L + + +Y L ++ ++A +AY+
Sbjct: 78 VV--SEEPIYIVTEYMNKGSLLDFL--KGETGKY-LRLPQLVDMSAQIASGMAYVERMN- 131
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ E KVADFG ++ I ++ + + PE +
Sbjct: 132 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 189
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L EL T G+ P
Sbjct: 190 TIKSDVWSFGILLTELTTKGRVP 212
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 77 RILGQGGQ-GTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVK 135
I+G+ G G VYK + ++ ++A K +D + +LE+++ EI IL+ +H N+VK
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAK---VIDTKSEEELEDYMVEIDILASCDHPNIVK 71
Query: 136 LLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSG 195
LL ++ EF G + + + E PLT V + AL YLH
Sbjct: 72 LLDAFYYENNLWILIEFCAGGAVDAVMLEL----ERPLTESQIQVVCKQTLDALNYLHDN 127
Query: 196 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 255
I HRD+K+ NIL K+ADFG S GT ++ PE
Sbjct: 128 K---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCE 184
Query: 256 QLTD-----KSDVYSFGVVLVELLTGKKP 279
D K+DV+S G+ L+E+ + P
Sbjct: 185 TSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 122/280 (43%), Gaps = 27/280 (9%)
Query: 73 FNVNRILGQGGQGTVYK-GRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHR 131
+ V +G G G K R DG+I+ K+ E ++ ++E+ +L ++ H
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQM--LVSEVNLLRELKHP 65
Query: 132 NVVKLLGCCLETEFPLL--VYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
N+V+ ++ L V E+ G L + + +Y L E RV ++ AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY-LDEEFVLRVMTQLTLAL 124
Query: 190 AYLH--SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 247
H S + HRD+K N+ LD + K+ DFG ++ + D + T + GT Y+
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYM 183
Query: 248 DPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLY 307
PE +KSD++S G +L EL P T+ LA + + R+
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF-----TAFSQKELAGK-IREGKFRRIP 237
Query: 308 HILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ D++ N+I+ R L+L RP++EE+
Sbjct: 238 YRYSDEL------NEIIT------RMLNLKDYHRPSVEEI 265
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 115/270 (42%), Gaps = 27/270 (10%)
Query: 79 LGQGGQGTVYK-GRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G V+K G ++A K L + + I E+ +L + N +V
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQVLHECNSPYIVGFY 89
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G + E + G+L Q L + E L +V+I V L YL
Sbjct: 90 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLRE--K 142
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
I HRD+K +NIL++ R K+ DFG S + + GT Y+ PE Q +
Sbjct: 143 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSYMSPERLQGTHY 199
Query: 258 TDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDDQVMKL 317
+ +SD++S G+ LVE+ G+ PI +G+ S L Y I+++ KL
Sbjct: 200 SVQSDIWSMGLSLVEMAVGRYPI-GSGSGSMAIFELLDY------------IVNEPPPKL 246
Query: 318 GKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ F + +CL N +R ++++
Sbjct: 247 PSGVFSLEFQDFVNKCLIKNPAERADLKQL 276
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 109/253 (43%), Gaps = 44/253 (17%)
Query: 55 IDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGRL--EDGR----IIAVKKSKLAVD 108
+D K+ + + + + + LG+G G V K GR +AVK K
Sbjct: 7 VDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS 66
Query: 109 DEELYKLEEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQ- 167
EL + ++E +L Q+NH +V+KL G C + LL+ E+ G+L L + +
Sbjct: 67 PSEL---RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
Query: 168 ------------------NEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTN 209
+E LT A +++ + YL A + HRD+ + N
Sbjct: 124 GPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARN 180
Query: 210 ILLDERYRAKVADFGTSK-------FIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSD 262
IL+ E + K++DFG S+ ++ Q + K D Y T +SD
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIY------TTQSD 234
Query: 263 VYSFGVVLVELLT 275
V+SFGV+L E++T
Sbjct: 235 VWSFGVLLWEIVT 247
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 14/216 (6%)
Query: 73 FNVNRILGQGGQGTVYKGR-LEDGRIIAVK-KSKLAVDDEELYKLEEFINEIFILSQINH 130
F +ILG+G TV R L R A+K K + E K+ E ++S+++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 91
Query: 131 RNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALA 190
VKL + E + NG L +++ +E RF A E+ AL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETC----TRFYTA-EIVSALE 146
Query: 191 YLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTFGYLDP 249
YLH I HRD+K NILL+E ++ DFGT+K ++ + GT Y+ P
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 203
Query: 250 EYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
E + SD+++ G ++ +L+ G P F GN
Sbjct: 204 ELLTEKSASKSSDLWALGCIIYQLVAGLPP-FRAGN 238
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 72 HFNVNRILGQGGQGTVYKGRLE----DGRIIAVKKSKLAVDDEEL--YKLEEFINEIFIL 125
H R+L G+G K +L G+ +AV+ +D +L L++ E+ I+
Sbjct: 12 HIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVR----IIDKTQLNSSSLQKLFREVRIM 67
Query: 126 SQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHL--HDRHQNEEYPLTWEMRFRVA 182
+NH N+VKL +ETE L LV E+ G ++ +L H R + +E +FR
Sbjct: 68 KVLNHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA----RAKFR-- 120
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
++ A+ Y H I HRD+K+ N+LLD K+ADFG S T G
Sbjct: 121 -QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCG 174
Query: 243 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKP 279
+ Y PE Q + DV+S GV+L L++G P
Sbjct: 175 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 14/221 (6%)
Query: 68 KATNHFNVNRILGQGGQGTVYKGR-LEDGRIIAVK-KSKLAVDDEELYKLEEFINEIFIL 125
K F +ILG+G TV R L R A+K K + E K+ E ++
Sbjct: 5 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVM 62
Query: 126 SQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEV 185
S+++H VKL + E + NG L +++ +E RF A E+
Sbjct: 63 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTA-EI 117
Query: 186 AGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTF 244
AL YLH I HRD+K NILL+E ++ DFGT+K ++ + GT
Sbjct: 118 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 174
Query: 245 GYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
Y+ PE SD+++ G ++ +L+ G P F GN
Sbjct: 175 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 214
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 14/221 (6%)
Query: 68 KATNHFNVNRILGQGGQGTVYKGR-LEDGRIIAVK-KSKLAVDDEELYKLEEFINEIFIL 125
K F +ILG+G TV R L R A+K K + E K+ E ++
Sbjct: 4 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVM 61
Query: 126 SQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEV 185
S+++H VKL + E + NG L +++ +E RF A E+
Sbjct: 62 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTA-EI 116
Query: 186 AGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTF 244
AL YLH I HRD+K NILL+E ++ DFGT+K ++ + GT
Sbjct: 117 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 173
Query: 245 GYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
Y+ PE SD+++ G ++ +L+ G P F GN
Sbjct: 174 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 213
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 14/221 (6%)
Query: 68 KATNHFNVNRILGQGGQGTVYKGR-LEDGRIIAVK-KSKLAVDDEELYKLEEFINEIFIL 125
K F +ILG+G TV R L R A+K K + E K+ E ++
Sbjct: 6 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVM 63
Query: 126 SQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEV 185
S+++H VKL + E + NG L +++ +E RF A E+
Sbjct: 64 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTA-EI 118
Query: 186 AGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTF 244
AL YLH I HRD+K NILL+E ++ DFGT+K ++ + GT
Sbjct: 119 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 175
Query: 245 GYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
Y+ PE SD+++ G ++ +L+ G P F GN
Sbjct: 176 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 215
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 72 HFNVNRILGQGGQGTVYKGRLE----DGRIIAVKKSKLAVDDEEL--YKLEEFINEIFIL 125
H R+L G+G K +L G+ +AV+ +D +L L++ E+ I+
Sbjct: 12 HIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVR----IIDKTQLNSSSLQKLFREVRIM 67
Query: 126 SQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHL--HDRHQNEEYPLTWEMRFRVA 182
+NH N+VKL +ETE L LV E+ G ++ +L H R + +E +FR
Sbjct: 68 KVLNHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA----RAKFR-- 120
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
++ A+ Y H I HRD+K+ N+LLD K+ADFG S + G
Sbjct: 121 -QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDEFCG 174
Query: 243 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKP 279
+ Y PE Q + DV+S GV+L L++G P
Sbjct: 175 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 101/218 (46%), Gaps = 27/218 (12%)
Query: 72 HFNVNRILGQGGQGTVYKGRLE----DGRIIAVKKSKLAVDDEEL--YKLEEFINEIFIL 125
H R+L G+G K +L G+ +AVK +D +L L++ E+ I+
Sbjct: 12 HIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVK----IIDKTQLNSSSLQKLFREVRIM 67
Query: 126 SQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHL--HDRHQNEEYPLTWEMRFRVA 182
+NH N+VKL +ETE L LV E+ G ++ +L H R + +E +FR
Sbjct: 68 KVLNHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA----RAKFR-- 120
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
++ A+ Y H I HRD+K+ N+LLD K+ADFG S G
Sbjct: 121 -QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDAFCG 174
Query: 243 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKP 279
Y PE Q + DV+S GV+L L++G P
Sbjct: 175 APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 15/223 (6%)
Query: 73 FNVNRILGQGGQGTVYKGR----LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
F + R+LG+GG G V++ R G+I A+K K A+ E IL ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGA 188
H +V L+ L+ E++ G L+ L + E + F +A E++ A
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL----EREGIFMEDTACFYLA-EISMA 133
Query: 189 LAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 248
L +LH I +RD+K NI+L+ + K+ DFG K D T VT GT Y+
Sbjct: 134 LGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGTIEYMA 189
Query: 249 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENV 291
PE S D +S G ++ ++LTG P TG ++ +
Sbjct: 190 PEILMRSGHNRAVDWWSLGALMYDMLTGAPPF--TGENRKKTI 230
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 14/221 (6%)
Query: 68 KATNHFNVNRILGQGGQGTVYKGR-LEDGRIIAVK-KSKLAVDDEELYKLEEFINEIFIL 125
K F +ILG+G TV R L R A+K K + E K+ E ++
Sbjct: 7 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVM 64
Query: 126 SQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEV 185
S+++H VKL + E + NG L +++ +E RF A E+
Sbjct: 65 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTA-EI 119
Query: 186 AGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTF 244
AL YLH I HRD+K NILL+E ++ DFGT+K ++ + GT
Sbjct: 120 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 176
Query: 245 GYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
Y+ PE SD+++ G ++ +L+ G P F GN
Sbjct: 177 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 216
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 41/280 (14%)
Query: 79 LGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNV---- 133
LG+G G V K R + G+I AVK+ + V+ +E +L ++ I+ R V
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLD-------ISXRTVDCPF 94
Query: 134 -VKLLGCCLETEFPLLVYEFIPNG--TLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALA 190
V G + E Y+ + D+ Q + ++ ++A+ + AL
Sbjct: 95 TVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQT----IPEDILGKIAVSIVKALE 150
Query: 191 YLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD---QTHVTTKIQGTFGYL 247
+LHS S + HRD+K +N+L++ + K DFG S ++ D K +
Sbjct: 151 HLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERI 208
Query: 248 DPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLY 307
+PE +Q + KSD++S G+ +EL + P S G Q+ L
Sbjct: 209 NPELNQKG-YSVKSDIWSLGITXIELAILRFPYDSWGTPFQQ----------------LK 251
Query: 308 HILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
++++ +L F + +CL N K+RPT E+
Sbjct: 252 QVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 291
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LGQG G V+ G +A+K K E F+ E ++ ++ H +V+L
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGN-----MSPEAFLQEAQVMKKLRHEKLVQLYA 247
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
+E P+ +V E++ G+L L + + +Y L +A ++A +AY+
Sbjct: 248 VV--SEEPIYIVTEYMSKGSLLDFL--KGEMGKY-LRLPQLVDMAAQIASGMAYVERMN- 301
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ E KVADFG + I ++ + + PE +
Sbjct: 302 --YVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRF 359
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L EL T G+ P
Sbjct: 360 TIKSDVWSFGILLTELTTKGRVP 382
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 15/223 (6%)
Query: 73 FNVNRILGQGGQGTVYKGR----LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
F + R+LG+GG G V++ R G+I A+K K A+ E IL ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGA 188
H +V L+ L+ E++ G L+ L + E + F +A E++ A
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL----EREGIFMEDTACFYLA-EISMA 133
Query: 189 LAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 248
L +LH I +RD+K NI+L+ + K+ DFG K D T VT GT Y+
Sbjct: 134 LGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTIEYMA 189
Query: 249 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENV 291
PE S D +S G ++ ++LTG P TG ++ +
Sbjct: 190 PEILMRSGHNRAVDWWSLGALMYDMLTGAPPF--TGENRKKTI 230
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 114/259 (44%), Gaps = 23/259 (8%)
Query: 95 GRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLGCCLETEFP--LLVYEF 152
G ++AVK K + ++ EI IL + H +++K GCC + LV E+
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQ---EIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEY 116
Query: 153 IPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILL 212
+P G+L +L RH + A ++ +AYLH+ HRD+ + N+LL
Sbjct: 117 VPLGSLRDYL-PRHS-----IGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLL 167
Query: 213 DERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEYHQSSQLTDKSDVYSFGVV 269
D K+ DFG +K + + G F Y PE + + SDV+SFGV
Sbjct: 168 DNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYA-PECLKEYKFYYASDVWSFGVT 226
Query: 270 LVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVA-FAN 328
L ELLT S E + +A M RL +L ++ +L + ++ A +
Sbjct: 227 LYELLTHCDSSQSPPTKFLELIGIAQ---GQMTVLRLTELL-ERGERLPRPDKCPAEVYH 282
Query: 329 LAERCLDLNGKKRPTMEEV 347
L + C + RPT E +
Sbjct: 283 LMKNCWETEASFRPTFENL 301
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 73 FNVNRILGQGGQGTVYKGR-LEDGRIIAVK-KSKLAVDDEELYKLEEFINEIFILSQINH 130
F +ILG+G TV R L R A+K K + E K+ E ++S+++H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 73
Query: 131 RNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALA 190
VKL + E + NG L +++ +E RF A E+ AL
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTA-EIVSALE 128
Query: 191 YLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTFGYLDP 249
YLH I HRD+K NILL+E ++ DFGT+K ++ + GT Y+ P
Sbjct: 129 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 185
Query: 250 EYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
E SD+++ G ++ +L+ G P F GN
Sbjct: 186 ELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 220
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 73 FNVNRILGQGGQGTVYKGR-LEDGRIIAVK-KSKLAVDDEELYKLEEFINEIFILSQINH 130
F +ILG+G TV R L R A+K K + E K+ E ++S+++H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 88
Query: 131 RNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALA 190
VKL + E + NG L +++ +E RF A E+ AL
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTA-EIVSALE 143
Query: 191 YLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTFGYLDP 249
YLH I HRD+K NILL+E ++ DFGT+K ++ + GT Y+ P
Sbjct: 144 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 200
Query: 250 EYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
E SD+++ G ++ +L+ G P F GN
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 235
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 73 FNVNRILGQGGQGTVYKGR-LEDGRIIAVK-KSKLAVDDEELYKLEEFINEIFILSQINH 130
F +ILG+G TV R L R A+K K + E K+ E ++S+++H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 92
Query: 131 RNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALA 190
VKL + E + NG L +++ +E RF A E+ AL
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTA-EIVSALE 147
Query: 191 YLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTFGYLDP 249
YLH I HRD+K NILL+E ++ DFGT+K ++ + GT Y+ P
Sbjct: 148 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 204
Query: 250 EYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
E SD+++ G ++ +L+ G P F GN
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 239
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 27/280 (9%)
Query: 73 FNVNRILGQGGQGTVYK-GRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHR 131
+ V +G G G K R DG+I+ K+ E ++ ++E+ +L ++ H
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQM--LVSEVNLLRELKHP 65
Query: 132 NVVKLLGCCLETEFPLL--VYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
N+V+ ++ L V E+ G L + + +Y L E RV ++ AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY-LDEEFVLRVMTQLTLAL 124
Query: 190 AYLH--SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 247
H S + HRD+K N+ LD + K+ DFG ++ + D T GT Y+
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-TSFAKAFVGTPYYM 183
Query: 248 DPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLY 307
PE +KSD++S G +L EL P T+ LA + + R+
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF-----TAFSQKELAGK-IREGKFRRIP 237
Query: 308 HILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ D++ N+I+ R L+L RP++EE+
Sbjct: 238 YRYSDEL------NEIIT------RMLNLKDYHRPSVEEI 265
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 73 FNVNRILGQGGQGTVYKGR-LEDGRIIAVK-KSKLAVDDEELYKLEEFINEIFILSQINH 130
F +ILG+G TV R L R A+K K + E K+ E ++S+++H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 88
Query: 131 RNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALA 190
VKL + E + NG L +++ +E RF A E+ AL
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTA-EIVSALE 143
Query: 191 YLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTFGYLDP 249
YLH I HRD+K NILL+E ++ DFGT+K ++ + GT Y+ P
Sbjct: 144 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 200
Query: 250 EYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
E SD+++ G ++ +L+ G P F GN
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 235
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 26/239 (10%)
Query: 52 GSVIDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYK------GRLEDGRIIAVKKSKL 105
G + R F K +++++V LG+G V + G +II KK
Sbjct: 10 GQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK--- 66
Query: 106 AVDDEELYKLEEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDR 165
+ + KLE E I ++ H N+V+L E F LV++ + G L++ + R
Sbjct: 67 -LSARDFQKLER---EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR 122
Query: 166 HQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRA---KVAD 222
E + ++ ++ ++AY HS I HR++K N+LL + + K+AD
Sbjct: 123 EFYSEADASHCIQ-----QILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLAD 174
Query: 223 FGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 281
FG + I ++ + GT GYL PE + + D+++ GV+L LL G P +
Sbjct: 175 FGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW 231
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 73 FNVNRILGQGGQGTVYKGR-LEDGRIIAVK-KSKLAVDDEELYKLEEFINEIFILSQINH 130
F +ILG+G TV R L R A+K K + E K+ E ++S+++H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 89
Query: 131 RNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALA 190
VKL + E + NG L +++ +E RF A E+ AL
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTA-EIVSALE 144
Query: 191 YLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTFGYLDP 249
YLH I HRD+K NILL+E ++ DFGT+K ++ + GT Y+ P
Sbjct: 145 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSP 201
Query: 250 EYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
E SD+++ G ++ +L+ G P F GN
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 236
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 73 FNVNRILGQGGQGTVYKGR-LEDGRIIAVK-KSKLAVDDEELYKLEEFINEIFILSQINH 130
F +ILG+G TV R L R A+K K + E K+ E ++S+++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 91
Query: 131 RNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALA 190
VKL + E + NG L +++ +E RF A E+ AL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTA-EIVSALE 146
Query: 191 YLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTFGYLDP 249
YLH I HRD+K NILL+E ++ DFGT+K ++ + GT Y+ P
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 250 EYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
E SD+++ G ++ +L+ G P F GN
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 238
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 73 FNVNRILGQGGQGTVYKGR-LEDGRIIAVK-KSKLAVDDEELYKLEEFINEIFILSQINH 130
F +ILG+G TV R L R A+K K + E K+ E ++S+++H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 89
Query: 131 RNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALA 190
VKL + E + NG L +++ +E RF A E+ AL
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTA-EIVSALE 144
Query: 191 YLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTFGYLDP 249
YLH I HRD+K NILL+E ++ DFGT+K ++ + GT Y+ P
Sbjct: 145 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 250 EYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
E SD+++ G ++ +L+ G P F GN
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 236
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLE-------EFINEIFILSQINHR 131
LG G G V K + +I +K L LE + I E+ +L + N
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMARK---------LIHLEIKPAIRNQIIRELQVLHECNSP 74
Query: 132 NVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAY 191
+V G + E + G+L Q L + + E E+ +V+I V LAY
Sbjct: 75 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPE-----EILGKVSIAVLRGLAY 129
Query: 192 LHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY 251
L I HRD+K +NIL++ R K+ DFG S + + GT Y+ PE
Sbjct: 130 LREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSYMAPER 184
Query: 252 HQSSQLTDKSDVYSFGVVLVELLTGKKPI 280
Q + + +SD++S G+ LVEL G+ PI
Sbjct: 185 LQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 73 FNVNRILGQGGQGTVYKGR-LEDGRIIAVK-KSKLAVDDEELYKLEEFINEIFILSQINH 130
F +ILG+G TV R L R A+K K + E K+ E ++S+++H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 89
Query: 131 RNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALA 190
VKL + E + NG L +++ +E RF A E+ AL
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTA-EIVSALE 144
Query: 191 YLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTFGYLDP 249
YLH I HRD+K NILL+E ++ DFGT+K ++ + GT Y+ P
Sbjct: 145 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 250 EYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
E SD+++ G ++ +L+ G P F GN
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 236
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + F+ E ++ Q+ H+ +V+L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
T+ P+ ++ E++ NG+L L + LT +A ++A +A++
Sbjct: 76 VV--TQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERN- 129
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE
Sbjct: 130 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 187
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L E++T G+ P
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 112/248 (45%), Gaps = 34/248 (13%)
Query: 55 IDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGRL--EDGR----IIAVKKSKLAVD 108
+D K+ + + + + + LG+G G V K GR +AVK K
Sbjct: 7 VDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS 66
Query: 109 DEELYKLEEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQ- 167
EL + ++E +L Q+NH +V+KL G C + LL+ E+ G+L L + +
Sbjct: 67 PSEL---RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
Query: 168 ------------------NEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTN 209
+E LT A +++ + YL A + HRD+ + N
Sbjct: 124 GPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARN 180
Query: 210 ILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGYLDPEYHQSSQLTDKSDVYSFG 267
IL+ E + K++DFG S+ + + + V + QG ++ E T +SDV+SFG
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYEEDSXV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFG 239
Query: 268 VVLVELLT 275
V+L E++T
Sbjct: 240 VLLWEIVT 247
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 79 LGQGGQGTVYKG---RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVK 135
+G+G G V+KG R + +++A+K L ++E+ +++ EI +LSQ + V K
Sbjct: 30 IGKGSFGEVFKGIDNRTQ--KVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSPYVTK 84
Query: 136 LLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSG 195
G L+ ++ E++ G+ L E PL + E+ L YLHS
Sbjct: 85 YYGSYLKDTKLWIIMEYLGGGSALDLL------EPGPLDETQIATILREILKGLDYLHSE 138
Query: 196 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 255
HRDIK+ N+LL E K+ADFG + + Q + GT ++ PE + S
Sbjct: 139 KK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQS 194
Query: 256 QLTDKSDVYSFGVVLVELLTGKKP 279
K+D++S G+ +EL G+ P
Sbjct: 195 AYDSKADIWSLGITAIELARGEPP 218
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 18/204 (8%)
Query: 79 LGQGGQGTVYKGRLEDGR---IIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVK 135
+G+G G V+KG D R ++A+K L ++E+ +++ EI +LSQ + V K
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSPYVTK 69
Query: 136 LLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSG 195
G L+ ++ E++ G+ L E PL + E+ L YLHS
Sbjct: 70 YYGSYLKDTKLWIIMEYLGGGSALDLL------EPGPLDETQIATILREILKGLDYLHSE 123
Query: 196 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 255
HRDIK+ N+LL E K+ADFG + + Q + GT ++ PE + S
Sbjct: 124 KK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQS 179
Query: 256 QLTDKSDVYSFGVVLVELLTGKKP 279
K+D++S G+ +EL G+ P
Sbjct: 180 AYDSKADIWSLGITAIELARGEPP 203
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 73 FNVNRILGQGGQGTVYKGR-LEDGRIIAVK-KSKLAVDDEELYKLEEFINEIFILSQINH 130
F +ILG+G TV R L R A+K K + E K+ E ++S+++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 91
Query: 131 RNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALA 190
VKL + E + NG L +++ +E RF A E+ AL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTA-EIVSALE 146
Query: 191 YLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTFGYLDP 249
YLH I HRD+K NILL+E ++ DFGT+K ++ + GT Y+ P
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 250 EYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
E SD+++ G ++ +L+ G P F GN
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 238
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 102/227 (44%), Gaps = 29/227 (12%)
Query: 77 RILGQGGQGTVYKGRL------EDGRIIAVKK-SKLAVDDEELYKLEEFINEIFILSQIN 129
R LG G G VY+G++ +AVK ++ + +EL +F+ E I+S++N
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL----DFLMEALIISKLN 92
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEM--RFRVAIEVAG 187
H+N+V+ +G L++ ++ E + G L L + P + M VA ++A
Sbjct: 93 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 188 ALAYLHSGASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 244
YL HRDI + N LL AK+ DFG +A D + +G
Sbjct: 153 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGC 205
Query: 245 G-----YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 252
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 73 FNVNRILGQGGQGTVYKGR-LEDGRIIAVK-KSKLAVDDEELYKLEEFINEIFILSQINH 130
F +ILG+G TV R L R A+K K + E K+ E ++S+++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 91
Query: 131 RNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALA 190
VKL + E + NG L +++ +E RF A E+ AL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTA-EIVSALE 146
Query: 191 YLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTFGYLDP 249
YLH I HRD+K NILL+E ++ DFGT+K ++ + GT Y+ P
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 250 EYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
E SD+++ G ++ +L+ G P F GN
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 238
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + F+ E ++ Q+ H+ +V+L
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYA 76
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
T+ P+ ++ E++ NG+L L + LT +A ++A +A++
Sbjct: 77 VV--TQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERN- 130
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE
Sbjct: 131 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 188
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L E++T G+ P
Sbjct: 189 TIKSDVWSFGILLTEIVTHGRIP 211
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 73 FNVNRILGQGGQGTVYKGR-LEDGRIIAVK-KSKLAVDDEELYKLEEFINEIFILSQINH 130
F +ILG+G TV R L R A+K K + E K+ E ++S+++H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 94
Query: 131 RNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALA 190
VKL + E + NG L +++ +E RF A E+ AL
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTA-EIVSALE 149
Query: 191 YLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTFGYLDP 249
YLH I HRD+K NILL+E ++ DFGT+K ++ + GT Y+ P
Sbjct: 150 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 206
Query: 250 EYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
E SD+++ G ++ +L+ G P F GN
Sbjct: 207 ELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 241
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 73 FNVNRILGQGGQGTVYKGR-LEDGRIIAVK-KSKLAVDDEELYKLEEFINEIFILSQINH 130
F +ILG+G TV R L R A+K K + E K+ E ++S+++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 91
Query: 131 RNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALA 190
VKL + E + NG L +++ +E RF A E+ AL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTA-EIVSALE 146
Query: 191 YLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTFGYLDP 249
YLH I HRD+K NILL+E ++ DFGT+K ++ + GT Y+ P
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 250 EYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
E SD+++ G ++ +L+ G P F GN
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 238
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 73 FNVNRILGQGGQGTVYKGR-LEDGRIIAVK-KSKLAVDDEELYKLEEFINEIFILSQINH 130
F +ILG+G TV R L R A+K K + E K+ E ++S+++H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 92
Query: 131 RNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALA 190
VKL + E + NG L +++ +E RF A E+ AL
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTA-EIVSALE 147
Query: 191 YLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTFGYLDP 249
YLH I HRD+K NILL+E ++ DFGT+K ++ + GT Y+ P
Sbjct: 148 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 204
Query: 250 EYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
E SD+++ G ++ +L+ G P F GN
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 239
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 102/227 (44%), Gaps = 29/227 (12%)
Query: 77 RILGQGGQGTVYKGRL------EDGRIIAVKK-SKLAVDDEELYKLEEFINEIFILSQIN 129
R LG G G VY+G++ +AVK ++ + +EL +F+ E I+S++N
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL----DFLMEALIISKLN 106
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEM--RFRVAIEVAG 187
H+N+V+ +G L++ ++ E + G L L + P + M VA ++A
Sbjct: 107 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 188 ALAYLHSGASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 244
YL HRDI + N LL AK+ DFG +A D + +G
Sbjct: 167 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGC 219
Query: 245 G-----YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 266
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 104/221 (47%), Gaps = 27/221 (12%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGRLE----DGRIIAVKKSKLAVDDEEL--YKLEEFINEI 122
A H R+L G+G K +L G+ +AVK +D +L L++ E+
Sbjct: 2 ADLHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVK----IIDKTQLNSSSLQKLFREV 57
Query: 123 FILSQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHL--HDRHQNEEYPLTWEMRF 179
I+ +NH N+VKL +ETE L LV E+ G ++ +L H + +E +F
Sbjct: 58 RIMKVLNHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEA----RAKF 112
Query: 180 RVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 239
R ++ A+ Y H I HRD+K+ N+LLD K+ADFG S T
Sbjct: 113 R---QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-- 164
Query: 240 IQGTFGYLDPEYHQSSQLT-DKSDVYSFGVVLVELLTGKKP 279
G+ Y PE Q + + DV+S GV+L L++G P
Sbjct: 165 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + F+ E ++ Q+ H+ +V+L
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYA 77
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
T+ P+ ++ E++ NG+L L + LT +A ++A +A++
Sbjct: 78 VV--TQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERN- 131
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE
Sbjct: 132 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 189
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L E++T G+ P
Sbjct: 190 TIKSDVWSFGILLTEIVTHGRIP 212
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 112/248 (45%), Gaps = 34/248 (13%)
Query: 55 IDRCKLFSSKELDKATNHFNVNRILGQGGQGTVYKGRL--EDGR----IIAVKKSKLAVD 108
+D K+ + + + + + LG+G G V K GR +AVK K
Sbjct: 7 VDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS 66
Query: 109 DEELYKLEEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQ- 167
EL + ++E +L Q+NH +V+KL G C + LL+ E+ G+L L + +
Sbjct: 67 PSEL---RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKV 123
Query: 168 ------------------NEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTN 209
+E LT A +++ + YL A + HRD+ + N
Sbjct: 124 GPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARN 180
Query: 210 ILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG--TFGYLDPEYHQSSQLTDKSDVYSFG 267
IL+ E + K++DFG S+ + + + V + QG ++ E T +SDV+SFG
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYEEDSXV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFG 239
Query: 268 VVLVELLT 275
V+L E++T
Sbjct: 240 VLLWEIVT 247
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + + F+ E ++ Q+ H+ +V+L
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLK-----QGSMSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
T+ P+ ++ E++ NG+L L + LT +A ++A +A++
Sbjct: 76 VV--TQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERN- 129
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ + K+ADFG ++ I + + + PE
Sbjct: 130 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTF 187
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L E++T G+ P
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIP 210
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + F+ E ++ Q+ H+ +V+L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
T+ P+ ++ E++ NG+L L + LT +A ++A +A++
Sbjct: 76 VV--TQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERN- 129
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE
Sbjct: 130 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 187
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L E++T G+ P
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIP 210
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 73 FNVNRILGQGGQGTVYKGR-LEDGRIIAVK-KSKLAVDDEELYKLEEFINEIFILSQINH 130
F +ILG+G TV R L R A+K K + E K+ E ++S+++H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 91
Query: 131 RNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALA 190
VKL + E + NG L +++ +E RF A E+ AL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTA-EIVSALE 146
Query: 191 YLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTFGYLDP 249
YLH I HRD+K NILL+E ++ DFGT+K ++ + GT Y+ P
Sbjct: 147 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 250 EYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
E SD+++ G ++ +L+ G P F GN
Sbjct: 204 ELLTEKSAXKSSDLWALGCIIYQLVAGLPP-FRAGN 238
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + F+ E ++ Q+ H+ +V+L
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYA 84
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
T+ P+ ++ E++ NG+L L + LT +A ++A +A++
Sbjct: 85 VV--TQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERN- 138
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE
Sbjct: 139 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 196
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L E++T G+ P
Sbjct: 197 TIKSDVWSFGILLTEIVTHGRIP 219
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + + F+ E ++ Q+ H+ +V+L
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK-----QGSMSPDAFLAEANLMKQLQHQRLVRLYA 70
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
T+ P+ ++ E++ NG+L L + LT +A ++A +A++
Sbjct: 71 VV--TQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEE--- 122
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE
Sbjct: 123 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 182
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L E++T G+ P
Sbjct: 183 TIKSDVWSFGILLTEIVTHGRIP 205
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 20/213 (9%)
Query: 72 HFNVNRILGQGGQGTVYKGRLED-----GRIIAVKKSKLAVDDEELYKLEEFINEIFILS 126
H LG+G G+V R + G ++AVK+ + + D++ +F EI IL
Sbjct: 11 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ----RDFQREIQILK 66
Query: 127 QINHRNVVKLLGCCLET--EFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIE 184
++ +VK G + LV E++P+G L L RH+ L + +
Sbjct: 67 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRAR---LDASRLLLYSSQ 122
Query: 185 VAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTH--VTTKIQG 242
+ + YL S HRD+ + NIL++ K+ADFG +K + +D+ + V Q
Sbjct: 123 ICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 179
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 275
+ PE + + +SDV+SFGVVL EL T
Sbjct: 180 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 26/223 (11%)
Query: 68 KATNHFNVNRILGQGGQGTVYK------GRLEDGRIIAVKKSKLAVDDEELYKLEEFINE 121
K +++++V LG+G V + G +II KK + + KLE E
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK----LSARDFQKLE---RE 55
Query: 122 IFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRV 181
I ++ H N+V+L E F LV++ + G L++ + R E + ++
Sbjct: 56 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ--- 112
Query: 182 AIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTT 238
++ ++AY HS I HR++K N+LL + + K+ADFG + I ++ +
Sbjct: 113 --QILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH 165
Query: 239 KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 281
GT GYL PE + + D+++ GV+L LL G P +
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW 208
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 26/223 (11%)
Query: 68 KATNHFNVNRILGQGGQGTVYK------GRLEDGRIIAVKKSKLAVDDEELYKLEEFINE 121
K +++++V LG+G V + G +II KK + + KLE E
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK----LSARDFQKLE---RE 55
Query: 122 IFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRV 181
I ++ H N+V+L E F LV++ + G L++ + R E +
Sbjct: 56 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS-----HC 110
Query: 182 AIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTT 238
++ ++AY HS I HR++K N+LL + + K+ADFG + I ++ +
Sbjct: 111 IQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH 165
Query: 239 KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 281
GT GYL PE + + D+++ GV+L LL G P +
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW 208
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 26/223 (11%)
Query: 68 KATNHFNVNRILGQGGQGTVYK------GRLEDGRIIAVKKSKLAVDDEELYKLEEFINE 121
K +++++V LG+G V + G +II KK + + KLE E
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK----LSARDFQKLE---RE 54
Query: 122 IFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRV 181
I ++ H N+V+L E F LV++ + G L++ + R E + ++
Sbjct: 55 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ--- 111
Query: 182 AIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTT 238
++ ++AY HS I HR++K N+LL + + K+ADFG + I ++ +
Sbjct: 112 --QILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH 164
Query: 239 KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 281
GT GYL PE + + D+++ GV+L LL G P +
Sbjct: 165 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW 207
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + F+ E ++ Q+ H+ +V+L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYA 81
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
T+ P+ ++ E++ NG+L L + LT +A ++A +A++
Sbjct: 82 VV--TQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERN- 135
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE
Sbjct: 136 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 193
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L E++T G+ P
Sbjct: 194 TIKSDVWSFGILLTEIVTHGRIP 216
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 20/213 (9%)
Query: 72 HFNVNRILGQGGQGTVYKGRLED-----GRIIAVKKSKLAVDDEELYKLEEFINEIFILS 126
H LG+G G+V R + G ++AVK+ + + D++ +F EI IL
Sbjct: 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ----RDFQREIQILK 79
Query: 127 QINHRNVVKLLGCCLET--EFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIE 184
++ +VK G + LV E++P+G L L RH+ L + +
Sbjct: 80 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRAR---LDASRLLLYSSQ 135
Query: 185 VAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTH--VTTKIQG 242
+ + YL S HRD+ + NIL++ K+ADFG +K + +D+ + V Q
Sbjct: 136 ICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 192
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 275
+ PE + + +SDV+SFGVVL EL T
Sbjct: 193 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 101/227 (44%), Gaps = 29/227 (12%)
Query: 77 RILGQGGQGTVYKGRL------EDGRIIAVKK-SKLAVDDEELYKLEEFINEIFILSQIN 129
R LG G G VY+G++ +AVK ++ + +EL +F+ E I+S+ N
Sbjct: 43 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL----DFLMEALIISKFN 98
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEM--RFRVAIEVAG 187
H+N+V+ +G L++ ++ E + G L L + P + M VA ++A
Sbjct: 99 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 158
Query: 188 ALAYLHSGASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 244
YL HRDI + N LL AK+ DFG +A D + +G
Sbjct: 159 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGC 211
Query: 245 G-----YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 212 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 258
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G VYK + ++ +A K +EEL E++I EI IL+ +H +VKLLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL---EDYIVEIEILATCDHPYIVKLLG 83
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASS 198
++ EF P G + + + + LT V ++ AL +LHS
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIMLELDRG----LTEPQIQVVCRQMLEALNFLHSKR-- 137
Query: 199 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 258
I HRD+K+ N+L+ ++ADFG S + GT ++ PE +
Sbjct: 138 -IIHRDLKAGNVLMTLEGDIRLADFGVSAK-NLKTLQKRDSFIGTPYWMAPEVVMCETMK 195
Query: 259 D-----KSDVYSFGVVLVELLTGKKP 279
D K+D++S G+ L+E+ + P
Sbjct: 196 DTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + F+ E ++ Q+ H+ +V+L
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYA 83
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
T+ P+ ++ E++ NG+L L + LT +A ++A +A++
Sbjct: 84 VV--TQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERN- 137
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE
Sbjct: 138 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 195
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L E++T G+ P
Sbjct: 196 TIKSDVWSFGILLTEIVTHGRIP 218
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 101/227 (44%), Gaps = 29/227 (12%)
Query: 77 RILGQGGQGTVYKGRL------EDGRIIAVKK-SKLAVDDEELYKLEEFINEIFILSQIN 129
R LG G G VY+G++ +AVK ++ + +EL +F+ E I+S+ N
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL----DFLMEALIISKFN 92
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEM--RFRVAIEVAG 187
H+N+V+ +G L++ ++ E + G L L + P + M VA ++A
Sbjct: 93 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 188 ALAYLHSGASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 244
YL HRDI + N LL AK+ DFG +A D + +G
Sbjct: 153 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MAQDIYRASYYRKGGC 205
Query: 245 G-----YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 252
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + F+ E ++ Q+ H+ +V+L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
T+ P+ ++ E++ NG+L L + LT +A ++A +A++
Sbjct: 76 VV--TQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERN- 129
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE
Sbjct: 130 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 187
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L E++T G+ P
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIP 210
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 101/227 (44%), Gaps = 29/227 (12%)
Query: 77 RILGQGGQGTVYKGRL------EDGRIIAVKK-SKLAVDDEELYKLEEFINEIFILSQIN 129
R LG G G VY+G++ +AVK ++ + +EL +F+ E I+S+ N
Sbjct: 63 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL----DFLMEALIISKFN 118
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEM--RFRVAIEVAG 187
H+N+V+ +G L++ ++ E + G L L + P + M VA ++A
Sbjct: 119 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 178
Query: 188 ALAYLHSGASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 244
YL HRDI + N LL AK+ DFG +A D + +G
Sbjct: 179 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGC 231
Query: 245 G-----YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 232 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 278
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 110/247 (44%), Gaps = 19/247 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G V+ G + +AVK K ++ F+ E ++ + H +V+L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-----MSVQAFLEEANLMKTLQHDKLVRLYA 74
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASS 198
+ E ++ EF+ G+L L +E + + ++A +AY+
Sbjct: 75 VVTKEEPIYIITEFMAKGSLLDFLK---SDEGGKVLLPKLIDFSAQIAEGMAYIER---K 128
Query: 199 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 258
HRD+++ N+L+ E K+ADFG ++ I ++ + + PE T
Sbjct: 129 NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFT 188
Query: 259 DKSDVYSFGVVLVELLT-GKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDD--QVM 315
KS+V+SFG++L E++T GK P G T N + + R R+ + D+ +M
Sbjct: 189 IKSNVWSFGILLYEIVTYGKIPY--PGRT---NADVMSALSQGYRMPRMENCPDELYDIM 243
Query: 316 KLGKKNQ 322
K+ K +
Sbjct: 244 KMCWKEK 250
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 121/280 (43%), Gaps = 27/280 (9%)
Query: 73 FNVNRILGQGGQGTVYK-GRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHR 131
+ V +G G G K R DG+I+ K+ E ++ ++E+ +L ++ H
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQM--LVSEVNLLRELKHP 65
Query: 132 NVVKLLGCCLETEFPLL--VYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
N+V+ ++ L V E+ G L + + +Y L E RV ++ AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY-LDEEFVLRVMTQLTLAL 124
Query: 190 AYLH--SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 247
H S + HRD+K N+ LD + K+ DFG ++ + D+ + GT Y+
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED-FAKEFVGTPYYM 183
Query: 248 DPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLY 307
PE +KSD++S G +L EL P T+ LA + + R+
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF-----TAFSQKELAGK-IREGKFRRIP 237
Query: 308 HILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ D++ N+I+ R L+L RP++EE+
Sbjct: 238 YRYSDEL------NEIIT------RMLNLKDYHRPSVEEI 265
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 116/259 (44%), Gaps = 23/259 (8%)
Query: 95 GRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLGCCLET-EFPL-LVYEF 152
G ++AVK K + ++ EI IL + H +++K GCC + E L LV E+
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQ---EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEY 99
Query: 153 IPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILL 212
+P G+L +L RH + A ++ +AYLHS HR++ + N+LL
Sbjct: 100 VPLGSLRDYL-PRHS-----IGLAQLLLFAQQICEGMAYLHS---QHYIHRNLAARNVLL 150
Query: 213 DERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEYHQSSQLTDKSDVYSFGVV 269
D K+ DFG +K + + + G F Y PE + + SDV+SFGV
Sbjct: 151 DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PECLKEYKFYYASDVWSFGVT 209
Query: 270 LVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVA-FAN 328
L ELLT S E + +A M RL +L ++ +L + ++ +
Sbjct: 210 LYELLTHCDSSQSPPTKFLELIGIAQ---GQMTVLRLTELL-ERGERLPRPDKCPCEVYH 265
Query: 329 LAERCLDLNGKKRPTMEEV 347
L + C + RPT E +
Sbjct: 266 LMKNCWETEASFRPTFENL 284
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 101/227 (44%), Gaps = 29/227 (12%)
Query: 77 RILGQGGQGTVYKGRL------EDGRIIAVKK-SKLAVDDEELYKLEEFINEIFILSQIN 129
R LG G G VY+G++ +AVK ++ + +EL +F+ E I+S+ N
Sbjct: 53 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL----DFLMEALIISKFN 108
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEM--RFRVAIEVAG 187
H+N+V+ +G L++ ++ E + G L L + P + M VA ++A
Sbjct: 109 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 168
Query: 188 ALAYLHSGASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 244
YL HRDI + N LL AK+ DFG +A D + +G
Sbjct: 169 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGC 221
Query: 245 G-----YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 222 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 268
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 20/213 (9%)
Query: 72 HFNVNRILGQGGQGTVYKGRLED-----GRIIAVKKSKLAVDDEELYKLEEFINEIFILS 126
H LG+G G+V R + G ++AVK+ + + D++ +F EI IL
Sbjct: 12 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ----RDFQREIQILK 67
Query: 127 QINHRNVVKLLGCCLET--EFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIE 184
++ +VK G + LV E++P+G L L RH+ L + +
Sbjct: 68 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRAR---LDASRLLLYSSQ 123
Query: 185 VAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTH--VTTKIQG 242
+ + YL S HRD+ + NIL++ K+ADFG +K + +D+ + V Q
Sbjct: 124 ICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 180
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT 275
+ PE + + +SDV+SFGVVL EL T
Sbjct: 181 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 101/227 (44%), Gaps = 29/227 (12%)
Query: 77 RILGQGGQGTVYKGRL------EDGRIIAVKK-SKLAVDDEELYKLEEFINEIFILSQIN 129
R LG G G VY+G++ +AVK ++ + +EL +F+ E I+S+ N
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL----DFLMEALIISKFN 91
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEM--RFRVAIEVAG 187
H+N+V+ +G L++ ++ E + G L L + P + M VA ++A
Sbjct: 92 HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 151
Query: 188 ALAYLHSGASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 244
YL HRDI + N LL AK+ DFG +A D + +G
Sbjct: 152 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGC 204
Query: 245 G-----YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 205 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 251
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + F+ E ++ Q+ H+ +V+L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYA 81
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
T+ P+ ++ E++ NG+L L + LT +A ++A +A++
Sbjct: 82 VV--TQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERN- 135
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE
Sbjct: 136 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 193
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L E++T G+ P
Sbjct: 194 TIKSDVWSFGILLTEIVTHGRIP 216
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
Query: 72 HFNVNRILGQGGQGTVYKGRLE----DGRIIAVKKSKLAVDDEEL--YKLEEFINEIFIL 125
H R+L G+G K +L G+ +AVK +D +L L++ E+ I
Sbjct: 12 HIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVK----IIDKTQLNSSSLQKLFREVRIX 67
Query: 126 SQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHL--HDRHQNEEYPLTWEMRFRVA 182
+NH N+VKL +ETE L LV E+ G ++ +L H R + +E +FR
Sbjct: 68 KVLNHPNIVKLFEV-IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEA----RAKFR-- 120
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
++ A+ Y H I HRD+K+ N+LLD K+ADFG S G
Sbjct: 121 -QIVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK--LDAFCG 174
Query: 243 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKP 279
Y PE Q + DV+S GV+L L++G P
Sbjct: 175 APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 101/227 (44%), Gaps = 29/227 (12%)
Query: 77 RILGQGGQGTVYKGRL------EDGRIIAVKK-SKLAVDDEELYKLEEFINEIFILSQIN 129
R LG G G VY+G++ +AVK ++ + +EL +F+ E I+S+ N
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL----DFLMEALIISKFN 106
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEM--RFRVAIEVAG 187
H+N+V+ +G L++ ++ E + G L L + P + M VA ++A
Sbjct: 107 HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 188 ALAYLHSGASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 244
YL HRDI + N LL AK+ DFG +A D + +G
Sbjct: 167 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGC 219
Query: 245 G-----YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 266
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + F+ E ++ Q+ H+ +V+L
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYA 80
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
T+ P+ ++ E++ NG+L L + LT +A ++A +A++
Sbjct: 81 VV--TQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERN- 134
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE
Sbjct: 135 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 192
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L E++T G+ P
Sbjct: 193 TIKSDVWSFGILLTEIVTHGRIP 215
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G VYK + ++ +A K +EEL E++I EI IL+ +H +VKLLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL---EDYIVEIEILATCDHPYIVKLLG 75
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASS 198
++ EF P G + + + + LT V ++ AL +LHS
Sbjct: 76 AYYHDGKLWIMIEFCPGGAVDAIMLELDRG----LTEPQIQVVCRQMLEALNFLHSKR-- 129
Query: 199 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 258
I HRD+K+ N+L+ ++ADFG S + GT ++ PE +
Sbjct: 130 -IIHRDLKAGNVLMTLEGDIRLADFGVSAK-NLKTLQKRDSFIGTPYWMAPEVVMCETMK 187
Query: 259 D-----KSDVYSFGVVLVELLTGKKP 279
D K+D++S G+ L+E+ + P
Sbjct: 188 DTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 101/227 (44%), Gaps = 29/227 (12%)
Query: 77 RILGQGGQGTVYKGRL------EDGRIIAVKK-SKLAVDDEELYKLEEFINEIFILSQIN 129
R LG G G VY+G++ +AVK ++ + +EL +F+ E I+S+ N
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL----DFLMEALIISKFN 91
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEM--RFRVAIEVAG 187
H+N+V+ +G L++ ++ E + G L L + P + M VA ++A
Sbjct: 92 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 151
Query: 188 ALAYLHSGASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 244
YL HRDI + N LL AK+ DFG +A D + +G
Sbjct: 152 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGC 204
Query: 245 G-----YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 205 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 251
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 101/227 (44%), Gaps = 29/227 (12%)
Query: 77 RILGQGGQGTVYKGRL------EDGRIIAVKK-SKLAVDDEELYKLEEFINEIFILSQIN 129
R LG G G VY+G++ +AVK ++ + +EL +F+ E I+S+ N
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL----DFLMEALIISKFN 92
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEM--RFRVAIEVAG 187
H+N+V+ +G L++ ++ E + G L L + P + M VA ++A
Sbjct: 93 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 188 ALAYLHSGASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 244
YL HRDI + N LL AK+ DFG +A D + +G
Sbjct: 153 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGC 205
Query: 245 G-----YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 252
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 101/227 (44%), Gaps = 29/227 (12%)
Query: 77 RILGQGGQGTVYKGRL------EDGRIIAVKK-SKLAVDDEELYKLEEFINEIFILSQIN 129
R LG G G VY+G++ +AVK ++ + +EL +F+ E I+S+ N
Sbjct: 28 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL----DFLMEALIISKFN 83
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEM--RFRVAIEVAG 187
H+N+V+ +G L++ ++ E + G L L + P + M VA ++A
Sbjct: 84 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 143
Query: 188 ALAYLHSGASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 244
YL HRDI + N LL AK+ DFG +A D + +G
Sbjct: 144 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGC 196
Query: 245 G-----YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 197 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 243
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 28/228 (12%)
Query: 69 ATNH-FNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILS 126
+NH + ++ ILGQG V++GR + G + A+K + + L ++ + E +L
Sbjct: 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIK---VFNNISFLRPVDVQMREFEVLK 62
Query: 127 QINHRNVVKLLGCCLE--TEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAI- 183
++NH+N+VKL E T +L+ EF P G+LY L + P E F + +
Sbjct: 63 KLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLP---ESEFLIVLR 119
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILL----DERYRAKVADFGTSKFIAMDQTHVTTK 239
+V G + +L I HR+IK NI+ D + K+ DFG ++ + D+ V+
Sbjct: 120 DVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS-- 174
Query: 240 IQGTFGYLDPEYHQSSQLTDKS--------DVYSFGVVLVELLTGKKP 279
+ GT YL P+ ++ + L D++S GV TG P
Sbjct: 175 LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 108/247 (43%), Gaps = 19/247 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G V+ G + +AVK K ++ F+ E ++ + H +V+L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-----MSVQAFLEEANLMKTLQHDKLVRLYA 75
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASS 198
E ++ E++ G+L L +E + + ++A +AY+
Sbjct: 76 VVTREEPIYIITEYMAKGSLLDFLK---SDEGGKVLLPKLIDFSAQIAEGMAYIER---K 129
Query: 199 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLT 258
HRD+++ N+L+ E K+ADFG ++ I ++ + + PE T
Sbjct: 130 NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFT 189
Query: 259 DKSDVYSFGVVLVELLT-GKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDD--QVM 315
KSDV+SFG++L E++T GK P G T N + R R+ + D+ +M
Sbjct: 190 IKSDVWSFGILLYEIVTYGKIPY--PGRT---NADVMTALSQGYRMPRVENCPDELYDIM 244
Query: 316 KLGKKNQ 322
K+ K +
Sbjct: 245 KMCWKEK 251
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + F+ E ++ Q+ H+ +V+L
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYA 85
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
T+ P+ ++ E++ NG+L L + LT +A ++A +A++
Sbjct: 86 VV--TQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERN- 139
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ + K+ADFG ++ I ++ + + PE
Sbjct: 140 --YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 197
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L E++T G+ P
Sbjct: 198 TIKSDVWSFGILLTEIVTHGRIP 220
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 14/216 (6%)
Query: 73 FNVNRILGQGGQGTVYKGR-LEDGRIIAVK-KSKLAVDDEELYKLEEFINEIFILSQINH 130
F +ILG+G T R L R A+K K + E K+ E ++S+++H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 89
Query: 131 RNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALA 190
VKL + E + NG L +++ +E RF A E+ AL
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC----TRFYTA-EIVSALE 144
Query: 191 YLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV-TTKIQGTFGYLDP 249
YLH I HRD+K NILL+E ++ DFGT+K ++ + GT Y+ P
Sbjct: 145 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 250 EYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
E SD+++ G ++ +L+ G P F GN
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPP-FRAGN 236
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 99/223 (44%), Gaps = 21/223 (9%)
Query: 77 RILGQGGQGTVYKGRL------EDGRIIAVKK-SKLAVDDEELYKLEEFINEIFILSQIN 129
R LG G G VY+G++ +AVK ++ + +EL +F+ E I+S+ N
Sbjct: 54 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL----DFLMEALIISKFN 109
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEM--RFRVAIEVAG 187
H+N+V+ +G L++ ++ E + G L L + P + M VA ++A
Sbjct: 110 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 169
Query: 188 ALAYLHSGASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQG-T 243
YL HRDI + N LL AK+ DFG ++ I +
Sbjct: 170 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLP 226
Query: 244 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 227 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 269
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 33/214 (15%)
Query: 78 ILGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL 136
++G GG G V+K + DG+ +K+ K Y E+ E+ L++++H N+V
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVK--------YNNEKAEREVKALAKLDHVNIVHY 69
Query: 137 LGCC----------------LETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR 180
GC +T+ + EF GTL Q + R + L +
Sbjct: 70 NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK---LDKVLALE 126
Query: 181 VAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKI 240
+ ++ + Y+HS + +RD+K +NI L + + K+ DFG + D +K
Sbjct: 127 LFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK- 182
Query: 241 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELL 274
GT Y+ PE S + D+Y+ G++L ELL
Sbjct: 183 -GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 28/228 (12%)
Query: 69 ATNH-FNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILS 126
+NH + ++ ILGQG V++GR + G + A+K + + L ++ + E +L
Sbjct: 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIK---VFNNISFLRPVDVQMREFEVLK 62
Query: 127 QINHRNVVKLLGCCLE--TEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAI- 183
++NH+N+VKL E T +L+ EF P G+LY L + P E F + +
Sbjct: 63 KLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLP---ESEFLIVLR 119
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILL----DERYRAKVADFGTSKFIAMDQTHVTTK 239
+V G + +L I HR+IK NI+ D + K+ DFG ++ + D+ V
Sbjct: 120 DVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX-- 174
Query: 240 IQGTFGYLDPEYHQSSQLTDKS--------DVYSFGVVLVELLTGKKP 279
+ GT YL P+ ++ + L D++S GV TG P
Sbjct: 175 LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 115/263 (43%), Gaps = 24/263 (9%)
Query: 73 FNVNRILGQGGQGTVYKGRLEDGRII-AVK---KSKLAVDDEELYKLEEFINEIFILSQI 128
F+ +++G+G G V R + + AVK K + EE + + E +L +
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSE---RNVLLKNV 96
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGA 188
H +V L + V ++I G L+ HL Q E L RF A E+A A
Sbjct: 97 KHPFLVGLHFSFQTADKLYFVLDYINGGELFYHL----QRERCFLEPRARFYAA-EIASA 151
Query: 189 LAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 248
L YLHS I +RD+K NILLD + + DFG K ++ T+ GT YL
Sbjct: 152 LGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTSTFCGTPEYLA 207
Query: 249 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ--ENVSLAAYFVHSMRKNRL 306
PE D + G VL E+L G P +S NT++ +N+ + N
Sbjct: 208 PEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR-NTAEMYDNILNKPLQLKPNITNSA 266
Query: 307 YHILD-----DQVMKLGKKNQIV 324
H+L+ D+ +LG K+ +
Sbjct: 267 RHLLEGLLQKDRTKRLGAKDDFM 289
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 99/223 (44%), Gaps = 21/223 (9%)
Query: 77 RILGQGGQGTVYKGRL------EDGRIIAVKK-SKLAVDDEELYKLEEFINEIFILSQIN 129
R LG G G VY+G++ +AVK ++ + +EL +F+ E I+S+ N
Sbjct: 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL----DFLMEALIISKFN 132
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEM--RFRVAIEVAG 187
H+N+V+ +G L++ ++ E + G L L + P + M VA ++A
Sbjct: 133 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 192
Query: 188 ALAYLHSGASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQG-T 243
YL HRDI + N LL AK+ DFG ++ I +
Sbjct: 193 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLP 249
Query: 244 FGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 250 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 292
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 23/224 (10%)
Query: 77 RILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDD-EELYKLEE---FINEIFILSQINHRN 132
R LG G G VY+G++ G ++AV E+Y ++ F+ E I+S+ NH+N
Sbjct: 51 RGLGHGAFGEVYEGQV-SGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQN 109
Query: 133 VVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEM--RFRVAIEVAGALA 190
+V+ +G L++ ++ E + G L L + P + M VA ++A
Sbjct: 110 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 191 YLHSGASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG-- 245
YL HRDI + N LL AK+ DFG +A D + +G
Sbjct: 170 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRASYYRKGGCAML 222
Query: 246 ---YLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
++ PE T K+D +SFGV+L E+ + G P S N
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN 266
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 116/259 (44%), Gaps = 23/259 (8%)
Query: 95 GRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLGCCLET-EFPL-LVYEF 152
G ++AVK K + ++ EI IL + H +++K GCC + E L LV E+
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQ---EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEY 99
Query: 153 IPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILL 212
+P G+L +L RH + A ++ +AYLH+ HR++ + N+LL
Sbjct: 100 VPLGSLRDYL-PRHS-----IGLAQLLLFAQQICEGMAYLHA---QHYIHRNLAARNVLL 150
Query: 213 DERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEYHQSSQLTDKSDVYSFGVV 269
D K+ DFG +K + + + G F Y PE + + SDV+SFGV
Sbjct: 151 DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PECLKEYKFYYASDVWSFGVT 209
Query: 270 LVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVA-FAN 328
L ELLT S E + +A M RL +L ++ +L + ++ +
Sbjct: 210 LYELLTHCDSSQSPPTKFLELIGIAQ---GQMTVLRLTELL-ERGERLPRPDKCPCEVYH 265
Query: 329 LAERCLDLNGKKRPTMEEV 347
L + C + RPT E +
Sbjct: 266 LMKNCWETEASFRPTFENL 284
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G V+ G +AVK K + + F+ E ++ Q+ H+ +V+L
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK-----QGSMSPDAFLAEANLMKQLQHQRLVRLYA 71
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
T+ P+ ++ E++ NG+L L + LT +A ++A +A++
Sbjct: 72 VV--TQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEE--- 123
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HR++++ NIL+ + K+ADFG ++ I ++ + + PE
Sbjct: 124 RNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 183
Query: 258 TDKSDVYSFGVVLVELLT-GKKP 279
T KSDV+SFG++L E++T G+ P
Sbjct: 184 TIKSDVWSFGILLTEIVTHGRIP 206
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
Query: 79 LGQGGQGTVYK-GRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G V+K G ++A K L + + I E+ +L + N +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQVLHECNSPYIVGFY 70
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G + E + G+L Q L + E ++ +V+I V L YL
Sbjct: 71 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-----QILGKVSIAVIKGLTYLRE--K 123
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
I HRD+K +NIL++ R K+ DFG S + + GT Y+ PE Q +
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSYMSPERLQGTHY 180
Query: 258 TDKSDVYSFGVVLVELLTGKKPI 280
+ +SD++S G+ LVE+ G+ PI
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
Query: 79 LGQGGQGTVYK-GRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G V+K G ++A K L + + I E+ +L + N +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQVLHECNSPYIVGFY 70
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G + E + G+L Q L + E ++ +V+I V L YL
Sbjct: 71 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-----QILGKVSIAVIKGLTYLRE--K 123
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
I HRD+K +NIL++ R K+ DFG S + + GT Y+ PE Q +
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSYMSPERLQGTHY 180
Query: 258 TDKSDVYSFGVVLVELLTGKKPI 280
+ +SD++S G+ LVE+ G+ PI
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 13/213 (6%)
Query: 79 LGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G GTV+K + E I+A+K+ +L DDE + + EI +L ++ H+N+V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVP--SSALREICLLKELKHKNIVRLH 67
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
+ LV+EF Q L + L E+ ++ L + HS
Sbjct: 68 DVLHSDKKLTLVFEFCD-----QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN- 121
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
+ HRD+K N+L++ K+ADFG ++ + + ++ T Y P+ ++L
Sbjct: 122 --VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKL 178
Query: 258 TDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQE 289
S D++S G + EL +P+F + +
Sbjct: 179 YSTSIDMWSAGCIFAELANAARPLFPGNDVDDQ 211
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
Query: 79 LGQGGQGTVYK-GRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G V+K G ++A K L + + I E+ +L + N +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQVLHECNSPYIVGFY 70
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G + E + G+L Q L + E ++ +V+I V L YL
Sbjct: 71 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-----QILGKVSIAVIKGLTYLRE--K 123
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
I HRD+K +NIL++ R K+ DFG S + + GT Y+ PE Q +
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSYMSPERLQGTHY 180
Query: 258 TDKSDVYSFGVVLVELLTGKKPI 280
+ +SD++S G+ LVE+ G+ PI
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 39/223 (17%)
Query: 76 NRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFIN-EIFILSQINHRNV 133
+++G G G VY+ +L D G ++A+KK + + + F N E+ I+ +++H N+
Sbjct: 53 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDHCNI 103
Query: 134 VKLL------GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
V+L G + + LV +++P H + P+ + + ++
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFR 161
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGY 246
+LAY+HS I HRDIK N+LLD K+ DFG++K + + +V+ Y
Sbjct: 162 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------Y 210
Query: 247 LDPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFS 282
+ Y+++ +L T DV+S G VL ELL G +PIF
Sbjct: 211 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 252
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F + +G G G V + +E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++P G ++ HL + E RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ KVADFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 14/203 (6%)
Query: 79 LGQGGQGTVYK-GRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G V+K G ++A K L + + I E+ +L + N +V
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQVLHECNSPYIVGFY 97
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G + E + G+L Q L + E L +V+I V L YL
Sbjct: 98 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLRE--K 150
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
I HRD+K +NIL++ R K+ DFG S + + GT Y+ PE Q +
Sbjct: 151 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSYMSPERLQGTHY 207
Query: 258 TDKSDVYSFGVVLVELLTGKKPI 280
+ +SD++S G+ LVE+ G+ PI
Sbjct: 208 SVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
Query: 79 LGQGGQGTVYK-GRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G V+K G ++A K L + + I E+ +L + N +V
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQVLHECNSPYIVGFY 70
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G + E + G+L Q L + E ++ +V+I V L YL
Sbjct: 71 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-----QILGKVSIAVIKGLTYLRE--K 123
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
I HRD+K +NIL++ R K+ DFG S + + GT Y+ PE Q +
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSYMSPERLQGTHY 180
Query: 258 TDKSDVYSFGVVLVELLTGKKPI 280
+ +SD++S G+ LVE+ G+ PI
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 39/223 (17%)
Query: 76 NRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFIN-EIFILSQINHRNV 133
+++G G G VY+ +L D G ++A+KK + + + F N E+ I+ +++H N+
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDHCNI 109
Query: 134 VKLL------GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
V+L G + + LV +++P H + P+ + + ++
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFR 167
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGY 246
+LAY+HS I HRDIK N+LLD K+ DFG++K + + +V+ Y
Sbjct: 168 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------Y 216
Query: 247 LDPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFS 282
+ Y+++ +L T DV+S G VL ELL G +PIF
Sbjct: 217 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 258
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 39/223 (17%)
Query: 76 NRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFIN-EIFILSQINHRNV 133
+++G G G VY+ +L D G ++A+KK + + + F N E+ I+ +++H N+
Sbjct: 61 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDHCNI 111
Query: 134 VKLL------GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
V+L G + + LV +++P H + P+ + + ++
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFR 169
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGY 246
+LAY+HS I HRDIK N+LLD K+ DFG++K + + +V+ Y
Sbjct: 170 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------Y 218
Query: 247 LDPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFS 282
+ Y+++ +L T DV+S G VL ELL G +PIF
Sbjct: 219 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 260
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 39/223 (17%)
Query: 76 NRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFIN-EIFILSQINHRNV 133
+++G G G VY+ +L D G ++A+KK + + + F N E+ I+ +++H N+
Sbjct: 30 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDHCNI 80
Query: 134 VKLL------GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
V+L G + + LV +++P H + P+ + + ++
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFR 138
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGY 246
+LAY+HS I HRDIK N+LLD K+ DFG++K + + +V+ Y
Sbjct: 139 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------Y 187
Query: 247 LDPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFS 282
+ Y+++ +L T DV+S G VL ELL G +PIF
Sbjct: 188 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 229
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 39/223 (17%)
Query: 76 NRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFIN-EIFILSQINHRNV 133
+++G G G VY+ +L D G ++A+KK + + + F N E+ I+ +++H N+
Sbjct: 38 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDHCNI 88
Query: 134 VKLL------GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
V+L G + + LV +++P H + P+ + + ++
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFR 146
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGY 246
+LAY+HS I HRDIK N+LLD K+ DFG++K + + +V+ Y
Sbjct: 147 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------Y 195
Query: 247 LDPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFS 282
+ Y+++ +L T DV+S G VL ELL G +PIF
Sbjct: 196 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 237
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 110/226 (48%), Gaps = 39/226 (17%)
Query: 73 FNVNRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFIN-EIFILSQINH 130
+ +++G G G VY+ +L D G ++A+KK + + + F N E+ I+ +++H
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDH 110
Query: 131 RNVVKLL------GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIE 184
N+V+L G + + LV +++P H + P+ + + +
Sbjct: 111 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQ 168
Query: 185 VAGALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGT 243
+ +LAY+HS I HRDIK N+LLD K+ DFG++K + + +V+
Sbjct: 169 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS------ 219
Query: 244 FGYLDPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFS 282
Y+ Y+++ +L T DV+S G VL ELL G +PIF
Sbjct: 220 --YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 262
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 39/223 (17%)
Query: 76 NRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFIN-EIFILSQINHRNV 133
+++G G G VY+ +L D G ++A+KK + + + F N E+ I+ +++H N+
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDHCNI 75
Query: 134 VKLL------GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
V+L G + + LV +++P H + P+ + + ++
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFR 133
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGY 246
+LAY+HS I HRDIK N+LLD K+ DFG++K + + +V+ Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------Y 182
Query: 247 LDPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFS 282
+ Y+++ +L T DV+S G VL ELL G +PIF
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 224
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 94/202 (46%), Gaps = 14/202 (6%)
Query: 79 LGQGGQGTVYK-GRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G V+K G ++A K L + + I E+ +L + N +V
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA---IRNQIIRELQVLHECNSPYIVGFY 73
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G + E + G+L Q L + E ++ +V+I V L YL
Sbjct: 74 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-----QILGKVSIAVIKGLTYLRE--K 126
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
I HRD+K +NIL++ R K+ DFG S + +D+ + + GT Y+ PE Q +
Sbjct: 127 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDE--MANEFVGTRSYMSPERLQGTHY 183
Query: 258 TDKSDVYSFGVVLVELLTGKKP 279
+ +SD++S G+ LVE+ G+ P
Sbjct: 184 SVQSDIWSMGLSLVEMAVGRYP 205
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 39/223 (17%)
Query: 76 NRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFIN-EIFILSQINHRNV 133
+++G G G VY+ +L D G ++A+KK + + + F N E+ I+ +++H N+
Sbjct: 104 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDHCNI 154
Query: 134 VKLL------GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
V+L G + + LV +++P H + P+ + + ++
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFR 212
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGY 246
+LAY+HS I HRDIK N+LLD K+ DFG++K + + +V+ Y
Sbjct: 213 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------Y 261
Query: 247 LDPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFS 282
+ Y+++ +L T DV+S G VL ELL G +PIF
Sbjct: 262 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 303
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 39/223 (17%)
Query: 76 NRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFIN-EIFILSQINHRNV 133
+++G G G VY+ +L D G ++A+KK + + + F N E+ I+ +++H N+
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQGKAFKNRELQIMRKLDHCNI 75
Query: 134 VKLL------GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
V+L G + + LV +++P H + P+ + + ++
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFR 133
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGY 246
+LAY+HS I HRDIK N+LLD K+ DFG++K + + +V+ Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------Y 182
Query: 247 LDPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFS 282
+ Y+++ +L T DV+S G VL ELL G +PIF
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 224
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F + +G G G V + +E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++P G ++ HL + E RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP----HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ KVADFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 39/223 (17%)
Query: 76 NRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFIN-EIFILSQINHRNV 133
+++G G G VY+ +L D G ++A+KK + + + F N E+ I+ +++H N+
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQGKAFKNRELQIMRKLDHCNI 75
Query: 134 VKLL------GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
V+L G + + LV +++P H + P+ + + ++
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFR 133
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGY 246
+LAY+HS I HRDIK N+LLD K+ DFG++K + + +V+ Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--------Y 182
Query: 247 LDPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFS 282
+ Y+++ +L T DV+S G VL ELL G +PIF
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 224
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 79 LGQGGQGTVYK-GRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G V+K G ++A K L + + + I E+ +L + N +V
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFY 132
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
G + E + G+L Q L + E ++ +V+I V L YL
Sbjct: 133 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-----QILGKVSIAVIKGLTYLREKHK 187
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
I HRD+K +NIL++ R K+ DFG S + + GT Y+ PE Q +
Sbjct: 188 --IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---DSMANSFVGTRSYMSPERLQGTHY 242
Query: 258 TDKSDVYSFGVVLVELLTGKKPI 280
+ +SD++S G+ LVE+ G+ PI
Sbjct: 243 SVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F + +G G G V + +E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++P G ++ HL + E RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP----HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ KVADFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 13/200 (6%)
Query: 79 LGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G V+K R D G+I+A+KK + DD + K+ + EI +L Q+ H N+V LL
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIA--LREIRMLKQLKHPNLVNLL 68
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
LV+E+ + L H DR+Q + + + + A+ + H
Sbjct: 69 EVFRRKRRLHLVFEYCDHTVL--HELDRYQRG---VPEHLVKSITWQTLQAVNFCHKHNC 123
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYH-QSSQ 256
HRD+K NIL+ + K+ DFG ++ + + ++ T Y PE +Q
Sbjct: 124 ---IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV-ATRWYRSPELLVGDTQ 179
Query: 257 LTDKSDVYSFGVVLVELLTG 276
DV++ G V ELL+G
Sbjct: 180 YGPPVDVWAIGCVFAELLSG 199
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 15/210 (7%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
LG G G V+ +AVK K +E F+ E ++ + H +VKL
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDKLVKLHA 77
Query: 139 CCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
T+ P+ ++ EF+ G+L L +++ PL + F + ++A +A++
Sbjct: 78 VV--TKEPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDF--SAQIAEGMAFIEQRN- 131
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
HRD+++ NIL+ K+ADFG ++ I ++ + + PE
Sbjct: 132 --YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSF 189
Query: 258 TDKSDVYSFGVVLVELLT-GKKPIFSTGNT 286
T KSDV+SFG++L+E++T G+ P N
Sbjct: 190 TIKSDVWSFGILLMEIVTYGRIPYPGMSNP 219
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 19/224 (8%)
Query: 62 SSKELDKAT-NHFNVNRILGQGGQGTVY----KGRLEDGRIIAVKKSKLAVDDEELYKLE 116
S LD+ FN +LG+G G V KG E I +KK + DD+ +E
Sbjct: 9 PSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDD----VE 64
Query: 117 EFINEIFILSQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTW 175
+ E +L+ ++ + L C +T L V E++ G L H+ + +E +
Sbjct: 65 CTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF 124
Query: 176 EMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTH 235
A E++ L +LH I +RD+K N++LD K+ADFG K MD
Sbjct: 125 -----YAAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV- 175
Query: 236 VTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 279
T + GT Y+ PE D +++GV+L E+L G+ P
Sbjct: 176 TTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPP 219
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 75
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 76 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 127
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + T ++ T Y PE
Sbjct: 128 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 183
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 184 GCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 69
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 70 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 121
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + T ++ T Y PE
Sbjct: 122 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 177
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 69 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 120
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + T ++ T Y PE
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 176
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 69 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 120
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + T ++ T Y PE
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 176
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 68 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 119
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + T ++ T Y PE
Sbjct: 120 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 175
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 68 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 119
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + T ++ T Y PE
Sbjct: 120 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 175
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 113/261 (43%), Gaps = 27/261 (10%)
Query: 95 GRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLGCCLET--EFPLLVYEF 152
G ++AVK K + + EI IL + H ++VK GCC + + LV E+
Sbjct: 37 GEMVAVKALKEGCGPQ---LRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 93
Query: 153 IPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILL 212
+P G+L +L RH + A ++ +AYLH+ HR + + N+LL
Sbjct: 94 VPLGSLRDYL-PRHC-----VGLAQLLLFAQQICEGMAYLHA---QHYIHRALAARNVLL 144
Query: 213 DERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEYHQSSQLTDKSDVYSFGVV 269
D K+ DFG +K + + + G F Y PE + + SDV+SFGV
Sbjct: 145 DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PECLKECKFYYASDVWSFGVT 203
Query: 270 LVELLTGKKPIFSTGNTSQEN--VSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQI-VAF 326
L ELLT + N S L + M RL +L ++ +L + ++
Sbjct: 204 LYELLT-----YCDSNQSPHTKFTELIGHTQGQMTVLRLTELL-ERGERLPRPDRCPCEI 257
Query: 327 ANLAERCLDLNGKKRPTMEEV 347
+L + C + RPT + +
Sbjct: 258 YHLMKNCWETEASFRPTFQNL 278
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 15/215 (6%)
Query: 73 FNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRN 132
+ + LG G G V+ +AVK K +E F+ E ++ + H
Sbjct: 190 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDK 244
Query: 133 VVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAY 191
+VKL T+ P+ ++ EF+ G+L L +++ PL + F + ++A +A+
Sbjct: 245 LVKLHAVV--TKEPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDF--SAQIAEGMAF 299
Query: 192 LHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY 251
+ HRD+++ NIL+ K+ADFG ++ I ++ + + PE
Sbjct: 300 IEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA 356
Query: 252 HQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
T KSDV+SFG++L+E++T G+ P N
Sbjct: 357 INFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 391
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 113/261 (43%), Gaps = 27/261 (10%)
Query: 95 GRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLGCCLET--EFPLLVYEF 152
G ++AVK K + + EI IL + H ++VK GCC + + LV E+
Sbjct: 38 GEMVAVKALKEGCGPQ---LRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 94
Query: 153 IPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILL 212
+P G+L +L RH + A ++ +AYLH+ HR + + N+LL
Sbjct: 95 VPLGSLRDYL-PRHC-----VGLAQLLLFAQQICEGMAYLHA---QHYIHRALAARNVLL 145
Query: 213 DERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEYHQSSQLTDKSDVYSFGVV 269
D K+ DFG +K + + + G F Y PE + + SDV+SFGV
Sbjct: 146 DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PECLKECKFYYASDVWSFGVT 204
Query: 270 LVELLTGKKPIFSTGNTSQEN--VSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQI-VAF 326
L ELLT + N S L + M RL +L ++ +L + ++
Sbjct: 205 LYELLT-----YCDSNQSPHTKFTELIGHTQGQMTVLRLTELL-ERGERLPRPDRCPCEI 258
Query: 327 ANLAERCLDLNGKKRPTMEEV 347
+L + C + RPT + +
Sbjct: 259 YHLMKNCWETEASFRPTFQNL 279
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 27/217 (12%)
Query: 76 NRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFIN-EIFILSQINHRNV 133
+++G G G VY+ +L D G ++A+KK + + + F N E+ I+ +++H N+
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDHCNI 75
Query: 134 VKLL------GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
V+L G + + LV +++P H + P+ + + ++
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFR 133
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGY 246
+LAY+HS I HRDIK N+LLD K+ DFG++K + + +V+ I + Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-Y 188
Query: 247 LDPEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
PE ++ T DV+S G VL ELL G +PIF
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 224
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 72
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 73 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 124
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + T ++ T Y PE
Sbjct: 125 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 180
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 75
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 76 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 127
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + T ++ T Y PE
Sbjct: 128 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 183
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 184 GXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 114/244 (46%), Gaps = 44/244 (18%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEEL----------- 112
KE DK N + + R L QG + +D + A+KK + ++ +++
Sbjct: 24 KEKDKYINDYRIIRTLNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKIS 82
Query: 113 --YKLEEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEE 170
K ++F NE+ I++ I + + G + ++YE++ N ++ + +E
Sbjct: 83 IKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKF-------DE 135
Query: 171 YPLTWEMRFRVAI----------EVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKV 220
Y + + I V + +Y+H+ + I HRD+K +NIL+D+ R K+
Sbjct: 136 YFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKL 193
Query: 221 ADFGTSKFIAMDQTHVTTKIQ---GTFGYLDPEY--HQSSQLTDKSDVYSFGVVLVELLT 275
+DFG S+++ V KI+ GT+ ++ PE+ ++SS K D++S G+ L +
Sbjct: 194 SDFGESEYM------VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFY 247
Query: 276 GKKP 279
P
Sbjct: 248 NVVP 251
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEF---INEIFILS 126
+ F + LG G G V + +E G A+K +D +++ KL+E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKEIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E+ P G ++ HL + E RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP----HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+++D++ KV DFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV----KGRTWXLCGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 27/217 (12%)
Query: 76 NRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFIN-EIFILSQINHRNV 133
+++G G G VY+ +L D G ++A+KK + + + F N E+ I+ +++H N+
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDHCNI 87
Query: 134 VKLL------GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
V+L G + + LV +++P H + P+ + + ++
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFR 145
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGY 246
+LAY+HS I HRDIK N+LLD K+ DFG++K + + +V+ I + Y
Sbjct: 146 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-Y 200
Query: 247 LDPEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
PE ++ T DV+S G VL ELL G +PIF
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 236
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 69 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 120
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + T ++ T Y PE
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 176
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 98/227 (43%), Gaps = 46/227 (20%)
Query: 78 ILGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL 136
++G GG G V+K + DG+ +++ K Y E+ E+ L++++H N+V
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVK--------YNNEKAEREVKALAKLDHVNIVHY 70
Query: 137 LGC-------------CLE----------------TEFPLLVYEFIPNGTLYQHLHDRHQ 167
GC LE T+ + EF GTL Q + R
Sbjct: 71 NGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 130
Query: 168 NEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK 227
+ L + + ++ + Y+HS + HRD+K +NI L + + K+ DFG
Sbjct: 131 EK---LDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLVT 184
Query: 228 FIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELL 274
+ D T+ +GT Y+ PE S + D+Y+ G++L ELL
Sbjct: 185 SLKNDGKR--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 19/202 (9%)
Query: 83 GQGTVYKGRL----EDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
G+G+ K L EDGR +K+ ++ + + EE E+ +L+ + H N+V+
Sbjct: 33 GEGSFGKAILVKSTEDGRQYVIKEINISRMSSK--EREESRREVAVLANMKHPNIVQYRE 90
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHDRHQ---NEEYPLTWEMRFRVAIEVAGALAYLHSG 195
E +V ++ G L++ ++ + E+ L W +++ AL ++H
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW------FVQICLALKHVHD- 143
Query: 196 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS 255
I HRDIKS NI L + ++ DFG ++ + + GT YL PE ++
Sbjct: 144 --RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN-STVELARACIGTPYYLSPEICENK 200
Query: 256 QLTDKSDVYSFGVVLVELLTGK 277
+KSD+++ G VL EL T K
Sbjct: 201 PYNNKSDIWALGCVLYELCTLK 222
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 27/217 (12%)
Query: 76 NRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFIN-EIFILSQINHRNV 133
+++G G G VY+ +L D G ++A+KK + + + F N E+ I+ +++H N+
Sbjct: 44 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDHCNI 94
Query: 134 VKLL------GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
V+L G + + LV +++P H + P+ + + ++
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFR 152
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGY 246
+LAY+HS I HRDIK N+LLD K+ DFG++K + + +V+ I + Y
Sbjct: 153 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-Y 207
Query: 247 LDPEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
PE ++ T DV+S G VL ELL G +PIF
Sbjct: 208 RAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 243
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 27/217 (12%)
Query: 76 NRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFIN-EIFILSQINHRNV 133
+++G G G VY+ +L D G ++A+KK + + + F N E+ I+ +++H N+
Sbjct: 33 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDHCNI 83
Query: 134 VKLL------GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
V+L G + + LV +++P H + P+ + + ++
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFR 141
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGY 246
+LAY+HS I HRDIK N+LLD K+ DFG++K + + +V+ I + Y
Sbjct: 142 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-Y 196
Query: 247 LDPEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
PE ++ T DV+S G VL ELL G +PIF
Sbjct: 197 RAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 232
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 27/217 (12%)
Query: 76 NRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFIN-EIFILSQINHRNV 133
+++G G G VY+ +L D G ++A+KK + + + F N E+ I+ +++H N+
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDHCNI 87
Query: 134 VKLL------GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
V+L G + + LV +++P H + P+ + + ++
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFR 145
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGY 246
+LAY+HS I HRDIK N+LLD K+ DFG++K + + +V+ I + Y
Sbjct: 146 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-Y 200
Query: 247 LDPEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
PE ++ T DV+S G VL ELL G +PIF
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 236
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 27/225 (12%)
Query: 70 TNHFNVNRILGQGGQGTVY------KGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIF 123
++ + R+LG+G G V G+ ++I+ ++ K D E L + E+
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL------LREVQ 84
Query: 124 ILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAI 183
+L Q++H N++KL + + LV E G L+ + R + E R+
Sbjct: 85 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIR 139
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILLDERYR---AKVADFGTSKFIAMDQTHVTTKI 240
+V + Y+H + I HRD+K N+LL+ + + ++ DFG S + + KI
Sbjct: 140 QVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKI 195
Query: 241 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
GT Y+ PE + +K DV+S GV+L LL+G P F+ N
Sbjct: 196 -GTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP-FNGAN 237
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 24/205 (11%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNE-----EYPLTWEMRFRVAIEVAGALAY 191
+ TE L LV+EF L+Q L D PL F ++ LA+
Sbjct: 69 D-VIHTENKLYLVFEF-----LHQDLKDFMDASALTGIPLPLIKSYLF----QLLQGLAF 118
Query: 192 LHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY 251
HS + HRD+K N+L++ K+ADFG ++ + ++ T Y PE
Sbjct: 119 CHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEI 174
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 27/217 (12%)
Query: 76 NRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFIN-EIFILSQINHRNV 133
+++G G G VY+ +L D G ++A+KK + + + F N E+ I+ +++H N+
Sbjct: 29 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDHCNI 79
Query: 134 VKLL------GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
V+L G + + LV +++P H + P+ + + ++
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFR 137
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGY 246
+LAY+HS I HRDIK N+LLD K+ DFG++K + + +V+ I + Y
Sbjct: 138 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-Y 192
Query: 247 LDPEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
PE ++ T DV+S G VL ELL G +PIF
Sbjct: 193 RAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 228
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 27/217 (12%)
Query: 76 NRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFIN-EIFILSQINHRNV 133
+++G G G VY+ +L D G ++A+KK + + + F N E+ I+ +++H N+
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDHCNI 75
Query: 134 VKLL------GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
V+L G + + LV +++P H + P+ + + ++
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFR 133
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGY 246
+LAY+HS I HRDIK N+LLD K+ DFG++K + + +V+ I + Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-Y 188
Query: 247 LDPEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
PE ++ T DV+S G VL ELL G +PIF
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 224
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 27/217 (12%)
Query: 76 NRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFIN-EIFILSQINHRNV 133
+++G G G VY+ +L D G ++A+KK + + + F N E+ I+ +++H N+
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDHCNI 109
Query: 134 VKLL------GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
V+L G + + LV +++P H + P+ + + ++
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFR 167
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGY 246
+LAY+HS I HRDIK N+LLD K+ DFG++K + + +V+ I + Y
Sbjct: 168 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-Y 222
Query: 247 LDPEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
PE ++ T DV+S G VL ELL G +PIF
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 258
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 27/217 (12%)
Query: 76 NRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFIN-EIFILSQINHRNV 133
+++G G G VY+ +L D G ++A+KK + + + F N E+ I+ +++H N+
Sbjct: 26 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDHCNI 76
Query: 134 VKLL------GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
V+L G + + LV +++P H + P+ + + ++
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFR 134
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGY 246
+LAY+HS I HRDIK N+LLD K+ DFG++K + + +V+ I + Y
Sbjct: 135 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-Y 189
Query: 247 LDPEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
PE ++ T DV+S G VL ELL G +PIF
Sbjct: 190 RAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 225
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 120 NEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRF 179
NEI +L +I H N+V L L+ + + G L+ + ++ E +
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS----- 119
Query: 180 RVAIEVAGALAYLHSGASSPIYHRDIKSTNIL---LDERYRAKVADFGTSKFIAMDQTHV 236
R+ +V A+ YLH I HRD+K N+L LDE + ++DFG SK D V
Sbjct: 120 RLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSV 174
Query: 237 TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 286
+ GT GY+ PE + D +S GV+ LL G P + +
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA 224
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 101/225 (44%), Gaps = 15/225 (6%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINH 130
+HF + R +G+G G V + D + + K E ++ E+ I+ + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 131 RNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAI-EVAGAL 189
+V L + E +V + + G L HL QN + E ++ I E+ AL
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQ---QNVHFK---EETVKLFICELVMAL 128
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDP 249
YL + I HRD+K NILLDE + DF + + +T +TT + GT Y+ P
Sbjct: 129 DYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPR-ETQITT-MAGTKPYMAP 183
Query: 250 EYHQSSQLTDKS---DVYSFGVVLVELLTGKKPIFSTGNTSQENV 291
E S + S D +S GV ELL G++P +TS + +
Sbjct: 184 EMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEI 228
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 27/217 (12%)
Query: 76 NRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFIN-EIFILSQINHRNV 133
+++G G G VY+ +L D G ++A+KK + + + F N E+ I+ +++H N+
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQDKRFKNRELQIMRKLDHCNI 75
Query: 134 VKLL------GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
V+L G + + LV +++P H + P+ + + ++
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFR 133
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGY 246
+LAY+HS I HRDIK N+LLD K+ DFG++K + + +V+ I + Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-Y 188
Query: 247 LDPEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
PE ++ T DV+S G VL ELL G +PIF
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 224
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 120 NEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRF 179
NEI +L +I H N+V L L+ + + G L+ + ++ E +
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS----- 119
Query: 180 RVAIEVAGALAYLHSGASSPIYHRDIKSTNIL---LDERYRAKVADFGTSKFIAMDQTHV 236
R+ +V A+ YLH I HRD+K N+L LDE + ++DFG SK D V
Sbjct: 120 RLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSV 174
Query: 237 TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 286
+ GT GY+ PE + D +S GV+ LL G P + +
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA 224
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 27/225 (12%)
Query: 70 TNHFNVNRILGQGGQGTVY------KGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIF 123
++ + R+LG+G G V G+ ++I+ ++ K D E L + E+
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL------LREVQ 78
Query: 124 ILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAI 183
+L Q++H N++KL + + LV E G L+ + R + E R+
Sbjct: 79 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIR 133
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILLDERYR---AKVADFGTSKFIAMDQTHVTTKI 240
+V + Y+H + I HRD+K N+LL+ + + ++ DFG S + + KI
Sbjct: 134 QVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-KMKDKI 189
Query: 241 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
GT Y+ PE + +K DV+S GV+L LL+G P F+ N
Sbjct: 190 -GTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP-FNGAN 231
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F + LG G G V + +E G A+K +D +++ KL E +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++P G ++ HL + E RF A ++
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAA-QIV 152
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 153 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWTLCGTPEY 205
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 120 NEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRF 179
NEI +L +I H N+V L L+ + + G L+ + ++ E +
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS----- 119
Query: 180 RVAIEVAGALAYLHSGASSPIYHRDIKSTNIL---LDERYRAKVADFGTSKFIAMDQTHV 236
R+ +V A+ YLH I HRD+K N+L LDE + ++DFG SK D V
Sbjct: 120 RLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSV 174
Query: 237 TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 286
+ GT GY+ PE + D +S GV+ LL G P + +
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA 224
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F + LG G G V + +E G A+K +D +++ KL E +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++P G ++ HL + E RF A ++
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAA-QIV 152
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 153 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 205
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 13/213 (6%)
Query: 79 LGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G GTV+K + E I+A+K+ +L DDE + + EI +L ++ H+N+V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVP--SSALREICLLKELKHKNIVRLH 67
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
+ LV+EF Q L + L E+ ++ L + HS
Sbjct: 68 DVLHSDKKLTLVFEFCD-----QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN- 121
Query: 198 SPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
+ HRD+K N+L++ K+A+FG ++ + + ++ T Y P+ ++L
Sbjct: 122 --VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKL 178
Query: 258 TDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQE 289
S D++S G + EL +P+F + +
Sbjct: 179 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 211
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 120 NEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRF 179
NEI +L +I H N+V L L+ + + G L+ + ++ E +
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS----- 119
Query: 180 RVAIEVAGALAYLHSGASSPIYHRDIKSTNIL---LDERYRAKVADFGTSKFIAMDQTHV 236
R+ +V A+ YLH I HRD+K N+L LDE + ++DFG SK D V
Sbjct: 120 RLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSV 174
Query: 237 TTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 286
+ GT GY+ PE + D +S GV+ LL G P + +
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA 224
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 131/294 (44%), Gaps = 43/294 (14%)
Query: 79 LGQGGQGTVYKGRL------EDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRN 132
LG+ G VYKG L E + +A+K K D E EEF +E + +++ H N
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK---DKAEGPLREEFRHEAMLRARLQHPN 73
Query: 133 VVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMR-----------FRV 181
VV LLG + + +++ + +G L++ L R + + T + R +
Sbjct: 74 VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 133
Query: 182 AIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTHVTTKI 240
++A + YL +S + H+D+ + N+L+ ++ K++D G + + A D +
Sbjct: 134 VAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 190
Query: 241 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQENVSLAAYFVH 299
++ PE + + SD++S+GVVL E+ + G +P G ++Q+ V
Sbjct: 191 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY--CGYSNQDVV-------- 240
Query: 300 SMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEVSMELNG 353
M +NR QV+ +A + E C + +RP +++ L
Sbjct: 241 EMIRNR-------QVLPCPDDCPAWVYALMIE-CWNEFPSRRPRFKDIHSRLRA 286
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F + LG G G V + +E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++P G ++ HL + E RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F + LG G G V + +E G A+K +D +++ KL E +NE IL
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 82
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++P G ++ HL + E RF A ++
Sbjct: 83 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAA-QIV 137
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 138 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWTLCGTPEY 190
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 191 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 226
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F + LG G G V + +E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++P G ++ HL + E RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 27/217 (12%)
Query: 76 NRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFIN-EIFILSQINHRNV 133
+++G G G VY+ +L D G ++A+KK + + + F N E+ I+ +++H N+
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKK---------VLQGKAFKNRELQIMRKLDHCNI 75
Query: 134 VKLL------GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
V+L G + + LV +++P H + P+ + + ++
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLY--MYQLFR 133
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGY 246
+LAY+HS I HRDIK N+LLD K+ DFG++K + + +V+ I + Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY-Y 188
Query: 247 LDPEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
PE ++ T DV+S G VL ELL G +PIF
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFP 224
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F + LG G G V + +E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++P G ++ HL + E RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
+G+G G VYK + G A+KK +L +DE + I EI IL ++ H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLYD 67
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASS 198
+ +LV+E L Q L E L +++ +AY H
Sbjct: 68 VIHTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR-- 120
Query: 199 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS-QL 257
+ HRD+K N+L++ K+ADFG ++ + T +I T Y P+ S +
Sbjct: 121 -VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKY 178
Query: 258 TDKSDVYSFGVVLVELLTGKKPIFS 282
+ D++S G + E++ G P+F
Sbjct: 179 STTIDIWSVGCIFAEMVNG-TPLFP 202
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F + LG G G V + +E G A+K +D +++ KL E +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++P G ++ HL + E RF A ++
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP----HARFYAA-QIV 152
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 153 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 205
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ L++ H
Sbjct: 69 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLSFCH 120
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + T ++ T Y PE
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 176
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F + LG G G V + +E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++P G ++ HL + E RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP----HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 131/294 (44%), Gaps = 43/294 (14%)
Query: 79 LGQGGQGTVYKGRL------EDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRN 132
LG+ G VYKG L E + +A+K K D E EEF +E + +++ H N
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK---DKAEGPLREEFRHEAMLRARLQHPN 90
Query: 133 VVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMR-----------FRV 181
VV LLG + + +++ + +G L++ L R + + T + R +
Sbjct: 91 VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 150
Query: 182 AIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI-AMDQTHVTTKI 240
++A + YL +S + H+D+ + N+L+ ++ K++D G + + A D +
Sbjct: 151 VAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 207
Query: 241 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQENVSLAAYFVH 299
++ PE + + SD++S+GVVL E+ + G +P G ++Q+ V
Sbjct: 208 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY--CGYSNQDVV-------- 257
Query: 300 SMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEVSMELNG 353
M +NR QV+ +A + E C + +RP +++ L
Sbjct: 258 EMIRNR-------QVLPCPDDCPAWVYALMIE-CWNEFPSRRPRFKDIHSRLRA 303
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F + LG G G V + +E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++P G ++ HL + E RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP----HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 70 TNHFNVNRILGQGGQGTVY------KGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIF 123
++ + R+LG+G G V G+ ++I+ ++ K D E L + E+
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL------LREVQ 101
Query: 124 ILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAI 183
+L Q++H N++KL + + LV E G L+ + R + E R+
Sbjct: 102 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIR 156
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKI 240
+V + Y+H + I HRD+K N+LL+ + + ++ DFG S + + KI
Sbjct: 157 QVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-KMKDKI 212
Query: 241 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 279
GT Y+ PE + +K DV+S GV+L LL+G P
Sbjct: 213 -GTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 249
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 46/298 (15%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYK 114
KL KE + + + V +LG GG G+VY G R+ D +A+K K +++ D EL
Sbjct: 12 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPN 70
Query: 115 LEEFINEIFILSQINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEY 171
E+ +L +++ V++LL + F L++ P L+ + +R +E
Sbjct: 71 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE- 129
Query: 172 PLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIA 230
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A
Sbjct: 130 ----ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---A 179
Query: 231 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+ + V T GT Y PE+ + + +S V+S G++L +++ G P E
Sbjct: 180 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDE 234
Query: 290 NVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ F + H++ CL L RPT EE+
Sbjct: 235 EIIRGQVFFRQRVSSECQHLI--------------------RWCLALRPSDRPTFEEI 272
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 46/298 (15%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYK 114
KL KE + + + V +LG GG G+VY G R+ D +A+K K +++ D EL
Sbjct: 31 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPN 89
Query: 115 LEEFINEIFILSQINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEY 171
E+ +L +++ V++LL + F L++ P L+ + +R +E
Sbjct: 90 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE- 148
Query: 172 PLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIA 230
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A
Sbjct: 149 ----ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---A 198
Query: 231 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+ + V T GT Y PE+ + + +S V+S G++L +++ G P E
Sbjct: 199 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDE 253
Query: 290 NVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ F + H++ CL L RPT EE+
Sbjct: 254 EIIRGQVFFRQRVSSECQHLI--------------------RWCLALRPSDRPTFEEI 291
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 46/298 (15%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYK 114
KL KE + + + V +LG GG G+VY G R+ D +A+K K +++ D EL
Sbjct: 24 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPN 82
Query: 115 LEEFINEIFILSQINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEY 171
E+ +L +++ V++LL + F L++ P L+ + +R +E
Sbjct: 83 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE- 141
Query: 172 PLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIA 230
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A
Sbjct: 142 ----ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---A 191
Query: 231 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+ + V T GT Y PE+ + + +S V+S G++L +++ G P E
Sbjct: 192 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDE 246
Query: 290 NVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ F + H++ CL L RPT EE+
Sbjct: 247 EIIRGQVFFRQRVSSECQHLI--------------------RWCLALRPSDRPTFEEI 284
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 46/298 (15%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYK 114
KL KE + + + V +LG GG G+VY G R+ D +A+K K +++ D EL
Sbjct: 39 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPN 97
Query: 115 LEEFINEIFILSQINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEY 171
E+ +L +++ V++LL + F L++ P L+ + +R +E
Sbjct: 98 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE- 156
Query: 172 PLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIA 230
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A
Sbjct: 157 ----ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---A 206
Query: 231 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+ + V T GT Y PE+ + + +S V+S G++L +++ G P E
Sbjct: 207 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDE 261
Query: 290 NVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ F + H++ CL L RPT EE+
Sbjct: 262 EIIRGQVFFRQRVSSECQHLI--------------------RWCLALRPSDRPTFEEI 299
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 26/219 (11%)
Query: 70 TNHFNVNRILGQGGQGTVY------KGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIF 123
++ + R+LG+G G V G+ ++I+ ++ K D E L + E+
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL------LREVQ 102
Query: 124 ILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAI 183
+L Q++H N++KL + + LV E G L+ + R + E R+
Sbjct: 103 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIR 157
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILLDERYR---AKVADFGTSKFIAMDQTHVTTKI 240
+V + Y+H + I HRD+K N+LL+ + + ++ DFG S + + KI
Sbjct: 158 QVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-KMKDKI 213
Query: 241 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 279
GT Y+ PE + +K DV+S GV+L LL+G P
Sbjct: 214 -GTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 250
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 46/298 (15%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYK 114
KL KE + + + V +LG GG G+VY G R+ D +A+K K +++ D EL
Sbjct: 11 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPN 69
Query: 115 LEEFINEIFILSQINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEY 171
E+ +L +++ V++LL + F L++ P L+ + +R +E
Sbjct: 70 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE- 128
Query: 172 PLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIA 230
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A
Sbjct: 129 ----ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---A 178
Query: 231 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+ + V T GT Y PE+ + + +S V+S G++L +++ G P E
Sbjct: 179 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDE 233
Query: 290 NVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ F + H++ CL L RPT EE+
Sbjct: 234 EIIRGQVFFRQRVSSECQHLI--------------------RWCLALRPSDRPTFEEI 271
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEF---INEIFILS 126
+ F + LG G G V + +E G A+K +D +++ KL+E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKEIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E+ P G ++ HL + E RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP----HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+++D++ +V DFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV----KGRTWXLCGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 129/298 (43%), Gaps = 46/298 (15%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYK 114
KL KE + + + V +LG GG G+VY G R+ D +A+K K +++ D EL
Sbjct: 24 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPN 82
Query: 115 LEEFINEIFILSQINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEY 171
E+ +L +++ V++LL + F L++ P L+ + +R +E
Sbjct: 83 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE- 141
Query: 172 PLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIA 230
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A
Sbjct: 142 ----ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---A 191
Query: 231 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+ + V T GT Y PE+ + + +S V+S G++L +++ G P +E
Sbjct: 192 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEE 247
Query: 290 NVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ +F ++ +L CL L RPT EE+
Sbjct: 248 IIGGQVFF---------------------RQRVSXECQHLIRWCLALRPSDRPTFEEI 284
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F + LG G G V + +E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E+ P G ++ HL + E RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP----HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+++D++ KV DFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
+G+G G VYK + G A+KK +L +DE + I EI IL ++ H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLYD 67
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASS 198
+ +LV+E L Q L E L +++ +AY H
Sbjct: 68 VIHTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR-- 120
Query: 199 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS-QL 257
+ HRD+K N+L++ K+ADFG ++ + T ++ T Y P+ S +
Sbjct: 121 -VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKY 178
Query: 258 TDKSDVYSFGVVLVELLTGKKPIFS 282
+ D++S G + E++ G P+F
Sbjct: 179 STTIDIWSVGCIFAEMVNG-APLFP 202
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 46/298 (15%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYK 114
KL KE + + + V +LG GG G+VY G R+ D +A+K K +++ D EL
Sbjct: 25 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPN 83
Query: 115 LEEFINEIFILSQINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEY 171
E+ +L +++ V++LL + F L++ P L+ + +R +E
Sbjct: 84 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE- 142
Query: 172 PLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIA 230
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A
Sbjct: 143 ----ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---A 192
Query: 231 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+ + V T GT Y PE+ + + +S V+S G++L +++ G P E
Sbjct: 193 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDE 247
Query: 290 NVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ F + H++ CL L RPT EE+
Sbjct: 248 EIIGGQVFFRQRVSSECQHLI--------------------RWCLALRPSDRPTFEEI 285
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 129/298 (43%), Gaps = 46/298 (15%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYK 114
KL KE + + + V +LG GG G+VY G R+ D +A+K K +++ D EL
Sbjct: 25 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPN 83
Query: 115 LEEFINEIFILSQINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEY 171
E+ +L +++ V++LL + F L++ P L+ + +R +E
Sbjct: 84 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE- 142
Query: 172 PLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIA 230
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A
Sbjct: 143 ----ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---A 192
Query: 231 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+ + V T GT Y PE+ + + +S V+S G++L +++ G P +E
Sbjct: 193 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEE 248
Query: 290 NVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ +F ++ +L CL L RPT EE+
Sbjct: 249 IIGGQVFF---------------------RQRVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 71
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 72 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 123
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + ++ T Y PE
Sbjct: 124 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 179
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 70
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 71 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 122
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + ++ T Y PE
Sbjct: 123 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 178
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 106/251 (42%), Gaps = 34/251 (13%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIF 123
+E D + ++G+G G VY GR +A++ + D+E+ +L+ F E+
Sbjct: 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHGE--VAIRLIDIERDNED--QLKAFKREVM 81
Query: 124 ILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAI 183
Q H NVV +G C+ ++ TLY + D + L ++A
Sbjct: 82 AYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRD----AKIVLDVNKTRQIAQ 137
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFG---TSKFIAMDQTHVTTKI 240
E+ + YLH+ I H+D+KS N+ D + + DFG S + + +I
Sbjct: 138 EIVKGMGYLHAKG---ILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRI 193
Query: 241 Q-GTFGYLDPE-YHQSSQLTDK--------SDVYSFGVVLVELLTGKKP---------IF 281
Q G +L PE Q S T++ SDV++ G + EL + P I+
Sbjct: 194 QNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIW 253
Query: 282 STGNTSQENVS 292
G + N+S
Sbjct: 254 QMGTGMKPNLS 264
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 46/298 (15%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYK 114
KL KE + + + V +LG GG G+VY G R+ D +A+K K +++ D EL
Sbjct: 24 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPN 82
Query: 115 LEEFINEIFILSQINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEY 171
E+ +L +++ V++LL + F L++ P L+ + +R +E
Sbjct: 83 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE- 141
Query: 172 PLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIA 230
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A
Sbjct: 142 ----ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---A 191
Query: 231 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+ + V T GT Y PE+ + + +S V+S G++L +++ G P E
Sbjct: 192 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDE 246
Query: 290 NVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ F + H++ CL L RPT EE+
Sbjct: 247 EIIGGQVFFRQRVSSECQHLI--------------------RWCLALRPSDRPTFEEI 284
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 129/298 (43%), Gaps = 46/298 (15%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYK 114
KL KE + + + V +LG GG G+VY G R+ D +A+K K +++ D EL
Sbjct: 25 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPN 83
Query: 115 LEEFINEIFILSQINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEY 171
E+ +L +++ V++LL + F L++ P L+ + +R +E
Sbjct: 84 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE- 142
Query: 172 PLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIA 230
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A
Sbjct: 143 ----ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---A 192
Query: 231 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+ + V T GT Y PE+ + + +S V+S G++L +++ G P +E
Sbjct: 193 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEE 248
Query: 290 NVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ +F ++ +L CL L RPT EE+
Sbjct: 249 IIGGQVFF---------------------RQRVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
+G+G G VYK + G A+KK +L +DE + I EI IL ++ H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLYD 67
Query: 139 CCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASS 198
+ +LV+E L Q L E L +++ +AY H
Sbjct: 68 VIHTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR-- 120
Query: 199 PIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSS-QL 257
+ HRD+K N+L++ K+ADFG ++ + T ++ T Y P+ S +
Sbjct: 121 -VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKY 178
Query: 258 TDKSDVYSFGVVLVELLTGKKPIFS 282
+ D++S G + E++ G P+F
Sbjct: 179 STTIDIWSVGCIFAEMVNG-TPLFP 202
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 20/194 (10%)
Query: 96 RIIAVKKSKLAVDDEELYKLEEFIN-EIFILSQI-NHRNVVKLLGCCLETEFPLLVYEFI 153
+I+ V +L+ E+L ++ E E IL Q+ H +++ L+ + F LV++ +
Sbjct: 125 KIMEVTAERLS--PEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLM 182
Query: 154 PNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD 213
G L+ +L E+ L+ + + + A+++LH+ I HRD+K NILLD
Sbjct: 183 RKGELFDYL-----TEKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLD 234
Query: 214 ERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQ------LTDKSDVYSFG 267
+ + +++DFG S ++ ++ GT GYL PE + S + D+++ G
Sbjct: 235 DNMQIRLSDFGFS--CHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACG 292
Query: 268 VVLVELLTGKKPIF 281
V+L LL G P +
Sbjct: 293 VILFTLLAGSPPFW 306
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 46/298 (15%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYK 114
KL KE + + + V +LG GG G+VY G R+ D +A+K K +++ D EL
Sbjct: 24 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPN 82
Query: 115 LEEFINEIFILSQINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEY 171
E+ +L +++ V++LL + F L++ P L+ + +R +E
Sbjct: 83 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE- 141
Query: 172 PLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIA 230
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A
Sbjct: 142 ----ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---A 191
Query: 231 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+ + V T GT Y PE+ + + +S V+S G++L +++ G P E
Sbjct: 192 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDE 246
Query: 290 NVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ F + H++ CL L RPT EE+
Sbjct: 247 EIIGGQVFFRQRVSSECQHLI--------------------RWCLALRPSDRPTFEEI 284
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 69 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 120
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + ++ T Y PE
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 176
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 46/298 (15%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYK 114
KL KE + + + V +LG GG G+VY G R+ D +A+K K +++ D EL
Sbjct: 25 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPN 83
Query: 115 LEEFINEIFILSQINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEY 171
E+ +L +++ V++LL + F L++ P L+ + +R +E
Sbjct: 84 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE- 142
Query: 172 PLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIA 230
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A
Sbjct: 143 ----ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---A 192
Query: 231 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+ + V T GT Y PE+ + + +S V+S G++L +++ G P E
Sbjct: 193 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDE 247
Query: 290 NVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ F + H++ CL L RPT EE+
Sbjct: 248 EIIGGQVFFRQRVSSECQHLI--------------------RWCLALRPSDRPTFEEI 285
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 70
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 71 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 122
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + ++ T Y PE
Sbjct: 123 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 178
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 68 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 119
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + ++ T Y PE
Sbjct: 120 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 175
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 69
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 70 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 121
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + ++ T Y PE
Sbjct: 122 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 177
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 69
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 70 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 121
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + ++ T Y PE
Sbjct: 122 SHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 177
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 71
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 72 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 123
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + ++ T Y PE
Sbjct: 124 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 179
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 71
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 72 D-VIHTENKLYLVFEF-----LHQDLKTFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 123
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + ++ T Y PE
Sbjct: 124 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 179
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F + LG G G V + +E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E+ P G ++ HL + E RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP----HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+++D++ KV DFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 68 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 119
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + ++ T Y PE
Sbjct: 120 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 175
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 69 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 120
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + ++ T Y PE
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 176
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 126/298 (42%), Gaps = 46/298 (15%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYK 114
KL KE + + + V +LG GG G+VY G R+ D +A+K K +++ D EL
Sbjct: 11 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPN 69
Query: 115 LEEFINEIFILSQINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEY 171
E+ +L +++ V++LL + F L++ P L+ + +R +E
Sbjct: 70 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE- 128
Query: 172 PLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIA 230
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A
Sbjct: 129 ----ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---A 178
Query: 231 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+ + V T GT Y PE+ + + +S V+S G++L +++ G P E
Sbjct: 179 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDE 233
Query: 290 NVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ F H++ CL L RPT EE+
Sbjct: 234 EIIRGQVFFRQRVSXECQHLI--------------------RWCLALRPSDRPTFEEI 271
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 72
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 73 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 124
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + ++ T Y PE
Sbjct: 125 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 180
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 69 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 120
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + ++ T Y PE
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 176
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+ K +L + E + I EI +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 69 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 120
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + T ++ T Y PE
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 176
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+ K +L + E + I EI +L ++NH N+VKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 68 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 119
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + T ++ T Y PE
Sbjct: 120 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 175
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 68
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 69 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 120
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + ++ T Y PE
Sbjct: 121 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 176
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 129/298 (43%), Gaps = 46/298 (15%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYK 114
KL KE + + + V +LG GG G+VY G R+ D +A+K K +++ D EL
Sbjct: 44 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPN 102
Query: 115 LEEFINEIFILSQINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEY 171
E+ +L +++ V++LL + F L++ P L+ + +R +E
Sbjct: 103 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE- 161
Query: 172 PLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIA 230
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A
Sbjct: 162 ----ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---A 211
Query: 231 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+ + V T GT Y PE+ + + +S V+S G++L +++ G P +E
Sbjct: 212 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEE 267
Query: 290 NVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ +F ++ +L CL L RPT EE+
Sbjct: 268 IIRGQVFF---------------------RQRVSXECQHLIRWCLALRPSDRPTFEEI 304
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 126/298 (42%), Gaps = 46/298 (15%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYK 114
KL KE + + + V +LG GG G+VY G R+ D +A+K K +++ D EL
Sbjct: 12 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPN 70
Query: 115 LEEFINEIFILSQINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEY 171
E+ +L +++ V++LL + F L++ P L+ + +R +E
Sbjct: 71 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE- 129
Query: 172 PLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIA 230
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A
Sbjct: 130 ----ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---A 179
Query: 231 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+ + V T GT Y PE+ + + +S V+S G++L +++ G P E
Sbjct: 180 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDE 234
Query: 290 NVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ F H++ CL L RPT EE+
Sbjct: 235 EIIRGQVFFRQRVSXECQHLI--------------------RWCLALRPSDRPTFEEI 272
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 70
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 71 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 122
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + ++ T Y PE
Sbjct: 123 SHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 178
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 126/298 (42%), Gaps = 46/298 (15%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYK 114
KL KE + + + V +LG GG G+VY G R+ D +A+K K +++ D EL
Sbjct: 12 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPN 70
Query: 115 LEEFINEIFILSQINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEY 171
E+ +L +++ V++LL + F L++ P L+ + +R +E
Sbjct: 71 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE- 129
Query: 172 PLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIA 230
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A
Sbjct: 130 ----ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---A 179
Query: 231 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+ + V T GT Y PE+ + + +S V+S G++L +++ G P E
Sbjct: 180 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDE 234
Query: 290 NVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ F H++ CL L RPT EE+
Sbjct: 235 EIIRGQVFFRQRVSXECQHLI--------------------RWCLALRPXDRPTFEEI 272
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 69
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLH---DRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+ TE L LV+EF L+Q L D PL + ++ LA+ H
Sbjct: 70 D-VIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCH 121
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
S + HRD+K N+L++ K+ADFG ++ + ++ T Y PE
Sbjct: 122 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 177
Query: 254 SSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 95 GRIIAVKKSKLA-------VDDEELYKL---EEFINEIFILSQINHRNVVKLLGCCLETE 144
GR++ VK + +D +++ KL E +NE IL +N +VKL +
Sbjct: 56 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 145 FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRD 204
+V E++P G ++ HL + E RF A ++ YLHS + +RD
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAA-QIVLTFEYLHS---LDLIYRD 167
Query: 205 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVY 264
+K N+L+D++ +V DFG +K + T + GT YL PE S D +
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 265 SFGVVLVELLTGKKPIFS 282
+ GV++ E+ G P F+
Sbjct: 224 ALGVLIYEMAAGYPPFFA 241
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 95 GRIIAVKKSKLA-------VDDEELYKL---EEFINEIFILSQINHRNVVKLLGCCLETE 144
GR++ VK + +D +++ KL E +NE IL +N +VKL +
Sbjct: 76 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 135
Query: 145 FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRD 204
+V E++P G ++ HL + E RF A ++ YLHS + +RD
Sbjct: 136 NLYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAA-QIVLTFEYLHS---LDLIYRD 187
Query: 205 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVY 264
+K N+L+D++ +V DFG +K + T + GT YL PE S D +
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 243
Query: 265 SFGVVLVELLTGKKPIFS 282
+ GV++ E+ G P F+
Sbjct: 244 ALGVLIYEMAAGYPPFFA 261
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 126/298 (42%), Gaps = 46/298 (15%)
Query: 59 KLFSSKELDKATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYK 114
KL KE + + + V +LG GG G+VY G R+ D +A+K K +++ D EL
Sbjct: 39 KLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPN 97
Query: 115 LEEFINEIFILSQINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEY 171
E+ +L +++ V++LL + F L++ P L+ + +R +E
Sbjct: 98 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE- 156
Query: 172 PLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIA 230
E+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A
Sbjct: 157 ----ELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---A 206
Query: 231 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+ + V T GT Y PE+ + + +S V+S G++L +++ G P E
Sbjct: 207 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDE 261
Query: 290 NVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ F H++ CL L RPT EE+
Sbjct: 262 EIIRGQVFFRQRVSXECQHLI--------------------RWCLALRPSDRPTFEEI 299
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 95 GRIIAVKKSKLA-------VDDEELYKL---EEFINEIFILSQINHRNVVKLLGCCLETE 144
GR++ VK + +D +++ KL E +NE IL +N +VKL +
Sbjct: 48 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 107
Query: 145 FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRD 204
+V E++P G ++ HL + E RF A ++ YLHS + +RD
Sbjct: 108 NLYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAA-QIVLTFEYLHS---LDLIYRD 159
Query: 205 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVY 264
+K N+L+D++ +V DFG +K + T + GT YL PE S D +
Sbjct: 160 LKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 215
Query: 265 SFGVVLVELLTGKKPIFS 282
+ GV++ E+ G P F+
Sbjct: 216 ALGVLIYEMAAGYPPFFA 233
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 95 GRIIAVKKSKLA-------VDDEELYKL---EEFINEIFILSQINHRNVVKLLGCCLETE 144
GR++ VK + +D +++ KL E +NE IL +N +VKL +
Sbjct: 56 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 145 FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRD 204
+V E++P G ++ HL + E RF A ++ YLHS + +RD
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAA-QIVLTFEYLHS---LDLIYRD 167
Query: 205 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVY 264
+K N+L+D++ +V DFG +K + T + GT YL PE S D +
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 265 SFGVVLVELLTGKKPIFS 282
+ GV++ E+ G P F+
Sbjct: 224 ALGVLIYEMAAGYPPFFA 241
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 95 GRIIAVKKSKLA-------VDDEELYKL---EEFINEIFILSQINHRNVVKLLGCCLETE 144
GR++ VK + +D +++ KL E +NE IL +N +VKL +
Sbjct: 55 GRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNS 114
Query: 145 FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRD 204
+V E++P G ++ HL + E RF A ++ YLHS + +RD
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAA-QIVLTFEYLHS---LDLIYRD 166
Query: 205 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVY 264
+K N+L+D++ +V DFG +K + T + GT YL PE S D +
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 265 SFGVVLVELLTGKKPIFS 282
+ GV++ E+ G P F+
Sbjct: 223 ALGVLIYEMAAGYPPFFA 240
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 95 GRIIAVKKSKLA-------VDDEELYKL---EEFINEIFILSQINHRNVVKLLGCCLETE 144
GR++ VK + +D +++ KL E +NE IL +N +VKL +
Sbjct: 55 GRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNS 114
Query: 145 FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRD 204
+V E++P G ++ HL + E RF A ++ YLHS + +RD
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAA-QIVLTFEYLHS---LDLIYRD 166
Query: 205 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVY 264
+K N+L+D++ +V DFG +K + T + GT YL PE S D +
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 265 SFGVVLVELLTGKKPIFS 282
+ GV++ E+ G P F+
Sbjct: 223 ALGVLIYEMAAGYPPFFA 240
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 95 GRIIAVKKSKLA-------VDDEELYKL---EEFINEIFILSQINHRNVVKLLGCCLETE 144
GR++ VK + +D +++ KL E +NE IL +N +VKL +
Sbjct: 55 GRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNS 114
Query: 145 FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRD 204
+V E++P G ++ HL + E RF A ++ YLHS + +RD
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAA-QIVLTFEYLHS---LDLIYRD 166
Query: 205 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVY 264
+K N+L+D++ +V DFG +K + T + GT YL PE S D +
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 265 SFGVVLVELLTGKKPIFS 282
+ GV++ E+ G P F+
Sbjct: 223 ALGVLIYEMAAGYPPFFA 240
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 95 GRIIAVKKSKLA-------VDDEELYKL---EEFINEIFILSQINHRNVVKLLGCCLETE 144
GR++ VK + +D +++ KL E +NE IL +N +VKL +
Sbjct: 56 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 145 FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRD 204
+V E++P G ++ HL + E RF A ++ YLHS + +RD
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAA-QIVLTFEYLHS---LDLIYRD 167
Query: 205 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVY 264
+K N+L+D++ +V DFG +K + T + GT YL PE S D +
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 265 SFGVVLVELLTGKKPIFS 282
+ GV++ E+ G P F+
Sbjct: 224 ALGVLIYEMAAGYPPFFA 241
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 22/220 (10%)
Query: 67 DKATNHFNVNRILGQGGQGTVYKGRLEDG-RIIAVKKSKLAVDDEELYKLEEFINEIFIL 125
D ++ F V LG+G VY+ + + + A+K K VD + + EI +L
Sbjct: 49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVR------TEIGVL 102
Query: 126 SQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIE 184
+++H N++KL ET + LV E + G L+ + ++ E ++ +
Sbjct: 103 LRLSHPNIIKLKEI-FETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK-----Q 156
Query: 185 VAGALAYLHSGASSPIYHRDIKSTNILLD---ERYRAKVADFGTSKFIAMDQTHVTTKIQ 241
+ A+AYLH I HRD+K N+L K+ADFG SK + + + +
Sbjct: 157 ILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV--EHQVLMKTVC 211
Query: 242 GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 281
GT GY PE + + D++S G++ LL G +P +
Sbjct: 212 GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFY 251
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F R LG G G V + E G A+K +D +++ KL E +NE I
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRIQQ 97
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E+ P G ++ HL + E RF A ++
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEP----HARFYAA-QIV 152
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ KVADFG +K + T + GT Y
Sbjct: 153 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEY 205
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 69
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGA 196
+ TE L LV+EF+ + D PL + ++ LA+ HS
Sbjct: 70 D-VIHTENKLYLVFEFL--SMDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHSHR 124
Query: 197 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQ 256
+ HRD+K N+L++ K+ADFG ++ + ++ T Y PE +
Sbjct: 125 ---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 180
Query: 257 LTDKS-DVYSFGVVLVELLT 275
+ D++S G + E++T
Sbjct: 181 YYSTAVDIWSLGCIFAEMVT 200
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 71
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGA 196
+ TE L LV+EF+ + D PL + ++ LA+ HS
Sbjct: 72 D-VIHTENKLYLVFEFL--SMDLKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHSHR 126
Query: 197 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQ 256
+ HRD+K N+L++ K+ADFG ++ + ++ T Y PE +
Sbjct: 127 ---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 182
Query: 257 LTDKS-DVYSFGVVLVELLT 275
+ D++S G + E++T
Sbjct: 183 YYSTAVDIWSLGCIFAEMVT 202
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 71
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGA 196
+ TE L LV+EF+ + D PL + ++ LA+ HS
Sbjct: 72 D-VIHTENKLYLVFEFL--SMDLKDFMDASALTGIPLPLIKSY--LFQLLQGLAFCHSHR 126
Query: 197 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQ 256
+ HRD+K N+L++ K+ADFG ++ + ++ T Y PE +
Sbjct: 127 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 182
Query: 257 LTDKS-DVYSFGVVLVELLT 275
+ D++S G + E++T
Sbjct: 183 YYSTAVDIWSLGCIFAEMVT 202
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 95 GRIIAVKKSKLA-------VDDEELYKL---EEFINEIFILSQINHRNVVKLLGCCLETE 144
GR++ VK + +D +++ KL E +NE IL +N +VKL +
Sbjct: 48 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 107
Query: 145 FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRD 204
+V E++P G ++ HL + E RF A ++ YLHS + +RD
Sbjct: 108 NLYMVMEYVPGGEMFSHLRRIGRFXEP----HARFYAA-QIVLTFEYLHS---LDLIYRD 159
Query: 205 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVY 264
+K N+L+D++ +V DFG +K + T + GT YL PE S D +
Sbjct: 160 LKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 215
Query: 265 SFGVVLVELLTGKKPIFS 282
+ GV++ E+ G P F+
Sbjct: 216 ALGVLIYEMAAGYPPFFA 233
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 125/293 (42%), Gaps = 46/293 (15%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYKLEEFI 119
KE + + + V +LG GG G+VY G R+ D +A+K K +++ D EL
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPNGTRVP 59
Query: 120 NEIFILSQINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWE 176
E+ +L +++ V++LL + F L++ P L+ + +R +E E
Sbjct: 60 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQE-----E 114
Query: 177 MRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTH 235
+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ +
Sbjct: 115 LARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDT 168
Query: 236 VTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
V T GT Y PE+ + + +S V+S G++L +++ G P E +
Sbjct: 169 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRG 223
Query: 295 AYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
F + H++ CL L RPT EE+
Sbjct: 224 QVFFRQRVSSECQHLI--------------------RWCLALRPSDRPTFEEI 256
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 10/211 (4%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN 129
N F R+LG+GG G V ++ G++ A KK + + + +NE IL ++N
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA-LNEKQILEKVN 242
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
R VV L + LV + G L H++ Q +P + + A E+ L
Sbjct: 243 SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG-FPEARAVFY--AAEICCGL 299
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDP 249
LH I +RD+K NILLD+ +++D G + + QT + ++ GT GY+ P
Sbjct: 300 EDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAP 354
Query: 250 EYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 280
E ++ + T D ++ G +L E++ G+ P
Sbjct: 355 EVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 70
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGA 196
+ TE L LV+EF+ + D PL + ++ LA+ HS
Sbjct: 71 D-VIHTENKLYLVFEFL--SMDLKDFMDASALTGIPLPLIKSY--LFQLLQGLAFCHSHR 125
Query: 197 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQ 256
+ HRD+K N+L++ K+ADFG ++ + ++ T Y PE +
Sbjct: 126 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 181
Query: 257 LTDKS-DVYSFGVVLVELLT 275
+ D++S G + E++T
Sbjct: 182 YYSTAVDIWSLGCIFAEMVT 201
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 10/211 (4%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN 129
N F R+LG+GG G V ++ G++ A KK + + + +NE IL ++N
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA-LNEKQILEKVN 242
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
R VV L + LV + G L H++ Q +P + + A E+ L
Sbjct: 243 SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG-FPEARAVFY--AAEICCGL 299
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDP 249
LH I +RD+K NILLD+ +++D G + + QT + ++ GT GY+ P
Sbjct: 300 EDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAP 354
Query: 250 EYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 280
E ++ + T D ++ G +L E++ G+ P
Sbjct: 355 EVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 25/217 (11%)
Query: 73 FNVNRILGQGGQGTVYKGRLEDGRII----AVKK-SKLAVDDEELYKLEEFINEIFILSQ 127
+N+ +LG+G G V K + RI AVK +K + +++ + + E+ +L +
Sbjct: 24 YNIVCMLGKGSFGEVLKCK---DRITQQEYAVKVINKASAKNKDTSTI---LREVELLKK 77
Query: 128 INHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
++H N++KL ++ +V E G L+ + R + E+ R+ +V
Sbjct: 78 LDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-----RIIKQVFS 132
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYR---AKVADFGTSKFIAMDQTHVTTKIQGTF 244
+ Y+H I HRD+K NILL+ + + K+ DFG S + T + +I GT
Sbjct: 133 GITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTA 187
Query: 245 GYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 281
Y+ PE + + +K DV+S GV+L LL+G P +
Sbjct: 188 YYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFY 223
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 23/216 (10%)
Query: 73 FNVNRILGQGGQGTVYKGR----LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
+N+ +LG+G G V K + ++ + + K+ D + E+ +L ++
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST-----ILREVELLKKL 78
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGA 188
+H N++KL ++ +V E G L+ + R + E+ R+ +V
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-----RIIKQVFSG 133
Query: 189 LAYLHSGASSPIYHRDIKSTNILLDERYR---AKVADFGTSKFIAMDQTHVTTKIQGTFG 245
+ Y+H I HRD+K NILL+ + + K+ DFG S + T + +I GT
Sbjct: 134 ITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAY 188
Query: 246 YLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 281
Y+ PE + + +K DV+S GV+L LL+G P +
Sbjct: 189 YIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFY 223
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 23/216 (10%)
Query: 73 FNVNRILGQGGQGTVYKGR----LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
+N+ +LG+G G V K + ++ + + K+ D + E+ +L ++
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST-----ILREVELLKKL 78
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGA 188
+H N++KL ++ +V E G L+ + R + E+ R+ +V
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-----RIIKQVFSG 133
Query: 189 LAYLHSGASSPIYHRDIKSTNILLDERYR---AKVADFGTSKFIAMDQTHVTTKIQGTFG 245
+ Y+H I HRD+K NILL+ + + K+ DFG S + T + +I GT
Sbjct: 134 ITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAY 188
Query: 246 YLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 281
Y+ PE + + +K DV+S GV+L LL+G P +
Sbjct: 189 YIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFY 223
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 128/298 (42%), Gaps = 48/298 (16%)
Query: 77 RILGQGGQGTVYK----GRLEDGRII--AVKKSKLAVDDEELYKLEEFINEIFILSQI-N 129
++LG G G V G + G I AVK K D E E ++E+ +++Q+ +
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSER---EALMSELKMMTQLGS 107
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNE-----EYP------------ 172
H N+V LLG C + L++E+ G L +L + + EY
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 173 -LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAM 231
LT+E A +VA + +L + HRD+ + N+L+ K+ DFG ++ I
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFKSCV---HRDLAARNVLVTHGKVVKICDFGLARDIMS 224
Query: 232 DQTHVT-TKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 290
D +V + ++ PE T KSDV+S+G++L E IFS G
Sbjct: 225 DSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWE-------IFSLGVNPYPG 277
Query: 291 VSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEVS 348
+ + A F + + +N DQ ++ I+ + C + +KRP+ ++
Sbjct: 278 IPVDANF-YKLIQNGFKM---DQPFYATEEIYII-----MQSCWAFDSRKRPSFPNLT 326
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 22/182 (12%)
Query: 110 EELYKLEEF-INEIFILSQIN-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQ 167
EE+ +L E + E+ IL +++ H N+++L F LV++ + G L+ +L ++
Sbjct: 48 EEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT 107
Query: 168 NEEYPLTWEMR--FRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGT 225
E E R R +EV AL L+ I HRD+K NILLD+ K+ DFG
Sbjct: 108 LSEK----ETRKIMRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGF 157
Query: 226 SKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS------DVYSFGVVLVELLTGKKP 279
S +D ++ GT YL PE + S + D++S GV++ LL G P
Sbjct: 158 S--CQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
Query: 280 IF 281
+
Sbjct: 216 FW 217
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 92/219 (42%), Gaps = 19/219 (8%)
Query: 73 FNVNRILGQGG-QGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFI-NEIFILSQINH 130
F LG G V G++ AVK + + L E I NEI +L +I H
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVK----CIPKKALKGKESSIENEIAVLRKIKH 79
Query: 131 RNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALA 190
N+V L LV + + G L+ + ++ E + +R +V A+
Sbjct: 80 ENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIR-----QVLDAVY 134
Query: 191 YLHSGASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 247
YLH I HRD+K N+L DE + ++DFG SK + V + GT GY+
Sbjct: 135 YLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEG--KGDVMSTACGTPGYV 189
Query: 248 DPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 286
PE + D +S GV+ LL G P + ++
Sbjct: 190 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDS 228
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 22/198 (11%)
Query: 95 GRIIAVKKSKLA-------VDDEELYKL---EEFINEIFILSQINHRNVVKLLGCCLETE 144
GR++ VK + +D +++ KL E +NE IL +N +VKL +
Sbjct: 56 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 145 FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRD 204
+V E+ P G ++ HL + E RF A ++ YLHS + +RD
Sbjct: 116 NLYMVMEYAPGGEMFSHLRRIGRFSEP----HARFYAA-QIVLTFEYLHS---LDLIYRD 167
Query: 205 IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVY 264
+K N+++D++ KV DFG +K + T + GT YL PE S D +
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 265 SFGVVLVELLTGKKPIFS 282
+ GV++ E+ G P F+
Sbjct: 224 ALGVLIYEMAAGYPPFFA 241
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F + LG G G V + +E G A+K +D +++ KL E +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N + KL + +V E+ P G ++ HL + E RF A ++
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP----HARFYAA-QIV 152
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+++D++ KV DFG +K + T + GT Y
Sbjct: 153 LTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEY 205
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F + LG G G V + +E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E+ P G ++ HL + E RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP----HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+++D++ +V DFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F + LG G G V + +E G A+K +D +++ KL E +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N + KL + +V E+ P G ++ HL + E RF A ++
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP----HARFYAA-QIV 152
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+++D++ KV DFG +K + T + GT Y
Sbjct: 153 LTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEY 205
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 22/182 (12%)
Query: 110 EELYKLEEF-INEIFILSQIN-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQ 167
EE+ +L E + E+ IL +++ H N+++L F LV++ + G L+ +L ++
Sbjct: 61 EEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT 120
Query: 168 NEEYPLTWEMR--FRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGT 225
E E R R +EV AL L+ I HRD+K NILLD+ K+ DFG
Sbjct: 121 LSEK----ETRKIMRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGF 170
Query: 226 SKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS------DVYSFGVVLVELLTGKKP 279
S +D ++ GT YL PE + S + D++S GV++ LL G P
Sbjct: 171 S--CQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
Query: 280 IF 281
+
Sbjct: 229 FW 230
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 26/206 (12%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 67
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLH-------DRHQNEEYPLTWEMRFRVAIEVAGALA 190
+ TE L + +++H+H D PL + ++ LA
Sbjct: 68 DV-IHTENKLYL--------VFEHVHQDLKTFMDASALTGIPLPLIKSY--LFQLLQGLA 116
Query: 191 YLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPE 250
+ HS + HRD+K N+L++ K+ADFG ++ + T ++ T Y PE
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 172
Query: 251 YHQSSQLTDKS-DVYSFGVVLVELLT 275
+ + D++S G + E++T
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F + LG G G V + +E G A+K +D +++ KL E +NE IL
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N + KL + +V E+ P G ++ HL + E RF A ++
Sbjct: 98 AVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP----HARFYAA-QIV 152
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+++D++ KV DFG +K + T + GT Y
Sbjct: 153 LTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEY 205
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 97/217 (44%), Gaps = 19/217 (8%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLE-DGRIIAVK---KSKLAVDDEELYKLEEFINEIFILS 126
N F+ ++LG+G G V R + GR A+K K + DE + + E +L
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE----VAHTVTESRVLQ 60
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL-HDRHQNEEYPLTWEMRFRVAIEV 185
H + L + V E+ G L+ HL +R EE RF A E+
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE-----RARFYGA-EI 114
Query: 186 AGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG 245
AL YLHS + +RDIK N++LD+ K+ DFG K D + T GT
Sbjct: 115 VSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPE 170
Query: 246 YLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
YL PE + + D + GVV+ E++ G+ P ++
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 97/217 (44%), Gaps = 19/217 (8%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLE-DGRIIAVK---KSKLAVDDEELYKLEEFINEIFILS 126
N F+ ++LG+G G V R + GR A+K K + DE + + E +L
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE----VAHTVTESRVLQ 60
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL-HDRHQNEEYPLTWEMRFRVAIEV 185
H + L + V E+ G L+ HL +R EE RF A E+
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE-----RARFYGA-EI 114
Query: 186 AGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG 245
AL YLHS + +RDIK N++LD+ K+ DFG K D + T GT
Sbjct: 115 VSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPE 170
Query: 246 YLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
YL PE + + D + GVV+ E++ G+ P ++
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 87/182 (47%), Gaps = 22/182 (12%)
Query: 110 EELYKLEEF-INEIFILSQIN-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQ 167
EE+ +L E + E+ IL +++ H N+++L F LV++ + G L+ +L ++
Sbjct: 61 EEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT 120
Query: 168 NEEYPLTWEMR--FRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGT 225
E E R R +EV AL L+ I HRD+K NILLD+ K+ DFG
Sbjct: 121 LSEK----ETRKIMRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGF 170
Query: 226 SKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS------DVYSFGVVLVELLTGKKP 279
S +D + GT YL PE + S + D++S GV++ LL G P
Sbjct: 171 S--CQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
Query: 280 IF 281
+
Sbjct: 229 FW 230
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTW 175
E+ E+ IL +I H NV+ L +L+ E + G L+ L ++ LT
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTE 113
Query: 176 EMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAM 231
E ++ + YLHS I H D+K NI+L +R R K+ DFG + I
Sbjct: 114 EEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 168
Query: 232 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE-- 289
D + I GT ++ PE L ++D++S GV+ LL+G P G+T QE
Sbjct: 169 DFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETL 226
Query: 290 -NVSLAAY 296
NVS Y
Sbjct: 227 ANVSAVNY 234
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 125/293 (42%), Gaps = 46/293 (15%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYKLEEFI 119
KE + + + V +LG GG G+VY G R+ D +A+K K +++ D EL
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPNGTRVP 59
Query: 120 NEIFILSQINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWE 176
E+ +L +++ V++LL + F L++ P L+ + +R +E E
Sbjct: 60 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-----E 114
Query: 177 MRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTH 235
+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ +
Sbjct: 115 LARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDT 168
Query: 236 VTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
V T GT Y PE+ + + +S V+S G++L +++ G P E +
Sbjct: 169 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRG 223
Query: 295 AYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
F + H++ CL L RPT EE+
Sbjct: 224 QVFFRQRVSSECQHLI--------------------RWCLALRPSDRPTFEEI 256
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 52/243 (21%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN-HRNVVKL 136
LG+G G V+K G ++AVKK A + + EI IL++++ H N+V L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNST--DAQRTFREIMILTELSGHENIVNL 74
Query: 137 LGC--CLETEFPLLVYEFIPN-------GTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
L LV++++ + + +H ++ V ++
Sbjct: 75 LNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQY--------------VVYQLIK 120
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSK-FIAM--------------- 231
+ YLHSG + HRD+K +NILL+ KVADFG S+ F+ +
Sbjct: 121 VIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENT 177
Query: 232 ----DQTHVTTKIQGTFGYLDPE-YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNT 286
D + T T Y PE S++ T D++S G +L E+L G KPIF +T
Sbjct: 178 ENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPIFPGSST 236
Query: 287 SQE 289
+
Sbjct: 237 MNQ 239
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 125/293 (42%), Gaps = 46/293 (15%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYKLEEFI 119
KE + + + V +LG GG G+VY G R+ D +A+K K +++ D EL
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPNGTRVP 60
Query: 120 NEIFILSQINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWE 176
E+ +L +++ V++LL + F L++ P L+ + +R +E E
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-----E 115
Query: 177 MRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTH 235
+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ +
Sbjct: 116 LARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDT 169
Query: 236 VTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
V T GT Y PE+ + + +S V+S G++L +++ G P E +
Sbjct: 170 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRG 224
Query: 295 AYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
F + H++ CL L RPT EE+
Sbjct: 225 QVFFRQRVSSECQHLI--------------------RWCLALRPSDRPTFEEI 257
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 97/217 (44%), Gaps = 19/217 (8%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLE-DGRIIAVK---KSKLAVDDEELYKLEEFINEIFILS 126
N F+ ++LG+G G V R + GR A+K K + DE + + E +L
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE----VAHTVTESRVLQ 63
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL-HDRHQNEEYPLTWEMRFRVAIEV 185
H + L + V E+ G L+ HL +R EE RF A E+
Sbjct: 64 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE-----RARFYGA-EI 117
Query: 186 AGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG 245
AL YLHS + +RDIK N++LD+ K+ DFG K D + T GT
Sbjct: 118 VSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPE 173
Query: 246 YLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
YL PE + + D + GVV+ E++ G+ P ++
Sbjct: 174 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 210
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 125/293 (42%), Gaps = 46/293 (15%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYKLEEFI 119
KE + + + V +LG GG G+VY G R+ D +A+K K +++ D EL
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPNGTRVP 60
Query: 120 NEIFILSQINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWE 176
E+ +L +++ V++LL + F L++ P L+ + +R +E E
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-----E 115
Query: 177 MRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTH 235
+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ +
Sbjct: 116 LARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDT 169
Query: 236 VTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
V T GT Y PE+ + + +S V+S G++L +++ G P E +
Sbjct: 170 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRG 224
Query: 295 AYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
F + H++ CL L RPT EE+
Sbjct: 225 QVFFRQRVSSECQHLI--------------------RWCLALRPSDRPTFEEI 257
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 125/293 (42%), Gaps = 46/293 (15%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYKLEEFI 119
KE + + + V +LG GG G+VY G R+ D +A+K K +++ D EL
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPNGTRVP 60
Query: 120 NEIFILSQINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWE 176
E+ +L +++ V++LL + F L++ P L+ + +R +E E
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-----E 115
Query: 177 MRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTH 235
+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ +
Sbjct: 116 LARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDT 169
Query: 236 VTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
V T GT Y PE+ + + +S V+S G++L +++ G P E +
Sbjct: 170 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRG 224
Query: 295 AYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
F + H++ CL L RPT EE+
Sbjct: 225 QVFFRQRVSSECQHLI--------------------RWCLALRPSDRPTFEEI 257
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 20/214 (9%)
Query: 73 FNVNRILGQGGQGTVY----KGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
FN +LG+G G V KG E + +KK + DD+ +E + E +L+
Sbjct: 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDD----VECTMVEKRVLALP 77
Query: 129 NHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
+ L C +T L V E++ G L H+ + +E + A E+A
Sbjct: 78 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF-----YAAEIAI 132
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK-IQGTFGY 246
L +L S I +RD+K N++LD K+ADFG K D VTTK GT Y
Sbjct: 133 GLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD--GVTTKXFCGTPDY 187
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 280
+ PE D ++FGV+L E+L G+ P
Sbjct: 188 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 221
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F+ + LG G G V + E G A+K +D +++ KL E +NE IL
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 83
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++ G ++ HL + E P RF A ++
Sbjct: 84 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-P---HARFYAA-QIV 138
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+DE+ +V DFG +K + T + GT Y
Sbjct: 139 LTFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 191
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 192 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 227
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 27/225 (12%)
Query: 70 TNHFNVNRILGQGGQGTVY------KGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIF 123
++ + R+LG+G G V G+ ++I+ ++ K D E L + E+
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL------LREVQ 78
Query: 124 ILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAI 183
+L Q++H N+ KL + + LV E G L+ + R + E R+
Sbjct: 79 LLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIR 133
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKI 240
+V + Y H + I HRD+K N+LL+ + + ++ DFG S + KI
Sbjct: 134 QVLSGITYXHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-KXKDKI 189
Query: 241 QGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
GT Y+ PE + +K DV+S GV+L LL+G P F+ N
Sbjct: 190 -GTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP-FNGAN 231
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 26/216 (12%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
L + G ++KGR + G I VK L V D K +F E L +H NV+ +LG
Sbjct: 18 LNENHSGELWKGRWQ-GNDIVVKV--LKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLG 74
Query: 139 CC--LETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGA 196
C P L+ ++P G+LY L H+ + + + A+++A +A+LH+
Sbjct: 75 ACQSPPAPHPTLITHWMPYGSLYNVL---HEGTNFVVDQSQAVKFALDMARGMAFLHT-- 129
Query: 197 SSPIYHRD-IKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTF---GYLDPEYH 252
P+ R + S ++++DE A+ I+M + + G ++ PE
Sbjct: 130 LEPLIPRHALNSRSVMIDEDMTAR---------ISMADVKFSFQSPGRMYAPAWVAPEAL 180
Query: 253 Q-SSQLTDK--SDVYSFGVVLVELLTGKKPIFSTGN 285
Q + T++ +D++SF V+L EL+T + P N
Sbjct: 181 QKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN 216
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 43/225 (19%)
Query: 78 ILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINE--IFILSQINHRNVVK 135
++G+G G VYKG L D R +AVK A + FINE I+ + + H N+ +
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFA-------NRQNFINEKNIYRVPLMEHDNIAR 71
Query: 136 LL------GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
+ E+ LLV E+ PNG+L ++L H ++ W R+A V L
Sbjct: 72 FIVGDERVTADGRMEY-LLVMEYYPNGSLXKYL-SLHTSD-----WVSSCRLAHSVTRGL 124
Query: 190 AYLHSGAS------SPIYHRDIKSTNILLDERYRAKVADFGTSKFI-------AMDQTHV 236
AYLH+ I HRD+ S N+L+ ++DFG S + ++ +
Sbjct: 125 AYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNA 184
Query: 237 TTKIQGTFGYLDPEYHQSS-QLTD------KSDVYSFGVVLVELL 274
GT Y+ PE + + L D + D+Y+ G++ E+
Sbjct: 185 AISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F+ + LG G G V + E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++ G ++ HL + E P RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-P---HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLXGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F+ + LG G G V + E G A+K +D +++ KL E +NE IL
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 117
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++ G ++ HL + E RF A ++
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP----HARFYAA-QIV 172
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 173 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGATWTLCGTPEY 225
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 226 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 261
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 126/291 (43%), Gaps = 52/291 (17%)
Query: 73 FNVNRILGQGGQGTVYKG-RLEDGRIIAVK--KSKLAVDDEELYKLEEFINEIFILSQIN 129
+ + +LG+GG GTV+ G RL D +A+K + L E+ +L ++
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 130 ----HRNVVKLLGCCLETE--FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAI 183
H V++LL ET+ F L++ +P L+ ++ ++ E P R
Sbjct: 93 AGGGHPGVIRLLDW-FETQEGFMLVLERPLPAQDLFDYITEKGPLGEGP----SRCFFG- 146
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
+V A+ + HS + HRDIK NIL+D R AK+ DFG+ + D+ + T G
Sbjct: 147 QVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALL-HDEPY--TDFDG 200
Query: 243 TFGYLDPEY---HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVH 299
T Y PE+ HQ L + V+S G++L +++ G P QE + +F
Sbjct: 201 TRVYSPPEWISRHQYHAL--PATVWSLGILLYDMVCGDIPF----ERDQEILEAELHFP- 253
Query: 300 SMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEVSME 350
H+ D L RCL RP++EE+ ++
Sbjct: 254 -------AHVSPD-------------CCALIRRCLAPKPSSRPSLEEILLD 284
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 46/293 (15%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYKLEEFI 119
KE + + + V +LG GG G+VY G R+ D +A+K K +++ D EL
Sbjct: 24 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPNGTRVP 82
Query: 120 NEIFILSQINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWE 176
E+ +L +++ V++LL + F L++ P L+ + +R +E E
Sbjct: 83 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-----E 137
Query: 177 MRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTH 235
+ +V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ +
Sbjct: 138 LARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDT 191
Query: 236 VTTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
V T GT Y PE+ + + +S V+S G++L +++ G P +E +
Sbjct: 192 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQ 247
Query: 295 AYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+F ++ +L CL L RPT EE+
Sbjct: 248 VFF---------------------RQRVSXECQHLIRWCLALRPSDRPTFEEI 279
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F+ + LG G G V + E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++ G ++ HL + E P RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-P---HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLAGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 20/214 (9%)
Query: 73 FNVNRILGQGGQGTVY----KGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
FN +LG+G G V KG E + +KK + DD+ +E + E +L+
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDD----VECTMVEKRVLALP 398
Query: 129 NHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
+ L C +T L V E++ G L H+ + +E + A E+A
Sbjct: 399 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF-----YAAEIAI 453
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK-IQGTFGY 246
L +L S I +RD+K N++LD K+ADFG K D VTTK GT Y
Sbjct: 454 GLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG--VTTKXFCGTPDY 508
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPI 280
+ PE D ++FGV+L E+L G+ P
Sbjct: 509 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 542
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTW 175
E+ E+ IL +I H NV+ L +L+ E + G L+ L ++ LT
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTE 113
Query: 176 EMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAM 231
E ++ + YLHS I H D+K NI+L +R R K+ DFG + I
Sbjct: 114 EEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 168
Query: 232 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE-- 289
D + I GT ++ PE L ++D++S GV+ LL+G P G+T QE
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETL 226
Query: 290 -NVSLAAY 296
NVS Y
Sbjct: 227 ANVSAVNY 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F + LG G G V + +E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++ G ++ HL + E P RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-P---HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTW 175
E+ E+ IL +I H NV+ L +L+ E + G L+ L ++ LT
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTE 113
Query: 176 EMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAM 231
E ++ + YLHS I H D+K NI+L +R R K+ DFG + I
Sbjct: 114 EEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 168
Query: 232 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE-- 289
D + I GT ++ PE L ++D++S GV+ LL+G P G+T QE
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETL 226
Query: 290 -NVSLAAY 296
NVS Y
Sbjct: 227 ANVSAVNY 234
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTW 175
E+ E+ IL +I H NV+ L +L+ E + G L+ L ++ LT
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTE 113
Query: 176 EMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAM 231
E ++ + YLHS I H D+K NI+L +R R K+ DFG + I
Sbjct: 114 EEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 168
Query: 232 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE-- 289
D + I GT ++ PE L ++D++S GV+ LL+G P G+T QE
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETL 226
Query: 290 -NVSLAAY 296
NVS Y
Sbjct: 227 ANVSAVNY 234
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTW 175
E+ E+ IL +I H NV+ L +L+ E + G L+ L ++ LT
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTE 113
Query: 176 EMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAM 231
E ++ + YLHS I H D+K NI+L +R R K+ DFG + I
Sbjct: 114 EEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 168
Query: 232 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE-- 289
D + I GT ++ PE L ++D++S GV+ LL+G P G+T QE
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETL 226
Query: 290 -NVSLAAY 296
NVS Y
Sbjct: 227 ANVSAVNY 234
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTW 175
E+ E+ IL +I H NV+ L +L+ E + G L+ L ++ LT
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTE 113
Query: 176 EMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAM 231
E ++ + YLHS I H D+K NI+L +R R K+ DFG + I
Sbjct: 114 EEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 168
Query: 232 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE-- 289
D + I GT ++ PE L ++D++S GV+ LL+G P G+T QE
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETL 226
Query: 290 -NVSLAAY 296
NVS Y
Sbjct: 227 ANVSAVNY 234
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTW 175
E+ E+ IL +I H NV+ L +L+ E + G L+ L ++ LT
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTE 113
Query: 176 EMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERY----RAKVADFGTSKFIAM 231
E ++ + YLHS I H D+K NI+L +R R K+ DFG + I
Sbjct: 114 EEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 168
Query: 232 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE-- 289
D + I GT ++ PE L ++D++S GV+ LL+G P G+T QE
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETL 226
Query: 290 -NVSLAAY 296
NVS Y
Sbjct: 227 ANVSAVNY 234
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTW 175
E+ E+ IL +I H NV+ L +L+ E + G L+ L ++ LT
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTE 113
Query: 176 EMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAM 231
E ++ + YLHS I H D+K NI+L +R R K+ DFG + I
Sbjct: 114 EEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 168
Query: 232 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE-- 289
D + I GT ++ PE L ++D++S GV+ LL+G P G+T QE
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETL 226
Query: 290 -NVSLAAY 296
NVS Y
Sbjct: 227 ANVSAVNY 234
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 103/235 (43%), Gaps = 27/235 (11%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
+ F + R Q G G Y + +KK +L+ + + EE E+ IL +I
Sbjct: 14 GSGQFAIVRKCRQKGTGKEYAAKF-------IKKRRLSSSRRGVSR-EEIEREVNILREI 65
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGA 188
H N++ L +L+ E + G L+ L ++ LT + + ++
Sbjct: 66 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES-----LTEDEATQFLKQILDG 120
Query: 189 LAYLHSGASSPIYHRDIKSTNILLDERY----RAKVADFGTSKFIAMDQTHVTTKIQGTF 244
+ YLHS I H D+K NI+L ++ R K+ DFG + I + + I GT
Sbjct: 121 VHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTP 175
Query: 245 GYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE---NVSLAAY 296
++ PE L ++D++S GV+ LL+G P G T QE N+S Y
Sbjct: 176 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GETKQETLTNISAVNY 228
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 24/227 (10%)
Query: 66 LDKATNHFNVNRILGQGGQGTVYKGR--LEDGRIIAVKKSKLAVDDEELYKLEEFINEIF 123
L +A + +G+G G V+K R GR +A+K+ ++ +E + I E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPL--STIREVA 63
Query: 124 ILSQIN---HRNVVKLLGCCL------ETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLT 174
+L + H NVV+L C ET+ LV+E + + L +L D+ P
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKL-TLVFEHV-DQDLTTYL-DKVPEPGVPT- 119
Query: 175 WEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 234
E + ++ L +LHS + HRD+K NIL+ + K+ADFG ++ +
Sbjct: 120 -ETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 235 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 281
T + T Y PE S D++S G + E+ +KP+F
Sbjct: 176 --LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLF 219
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 24/227 (10%)
Query: 66 LDKATNHFNVNRILGQGGQGTVYKGR--LEDGRIIAVKKSKLAVDDEELYKLEEFINEIF 123
L +A + +G+G G V+K R GR +A+K+ ++ +E + I E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPL--STIREVA 63
Query: 124 ILSQIN---HRNVVKLLGCCL------ETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLT 174
+L + H NVV+L C ET+ LV+E + + L +L D+ P
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKL-TLVFEHV-DQDLTTYL-DKVPEPGVPT- 119
Query: 175 WEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 234
E + ++ L +LHS + HRD+K NIL+ + K+ADFG ++ +
Sbjct: 120 -ETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 235 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 281
T + T Y PE S D++S G + E+ +KP+F
Sbjct: 176 --LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLF 219
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTW 175
E+ E+ IL +I H NV+ L +L+ E + G L+ L ++ LT
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTE 113
Query: 176 EMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAM 231
E ++ + YLHS I H D+K NI+L +R R K+ DFG + I
Sbjct: 114 EEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 168
Query: 232 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE-- 289
D + I GT ++ PE L ++D++S GV+ LL+G P G+T QE
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETL 226
Query: 290 -NVSLAAY 296
NVS Y
Sbjct: 227 ANVSAVNY 234
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 24/227 (10%)
Query: 66 LDKATNHFNVNRILGQGGQGTVYKGR--LEDGRIIAVKKSKLAVDDEELYKLEEFINEIF 123
L +A + +G+G G V+K R GR +A+K+ ++ +E + I E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPL--STIREVA 63
Query: 124 ILSQIN---HRNVVKLLGCCL------ETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLT 174
+L + H NVV+L C ET+ LV+E + + L +L D+ P
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKL-TLVFEHV-DQDLTTYL-DKVPEPGVPT- 119
Query: 175 WEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT 234
E + ++ L +LHS + HRD+K NIL+ + K+ADFG ++ +
Sbjct: 120 -ETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 235 HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 281
T + T Y PE S D++S G + E+ +KP+F
Sbjct: 176 --LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLF 219
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 79 LGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G VYK R + G ++A+KK +L + E + I EI +L ++NH N+VKLL
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELNHPNIVKLL 71
Query: 138 GCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGA 196
+ TE L LV+E + + D PL + ++ LA+ HS
Sbjct: 72 DV-IHTENKLYLVFEHVDQD--LKKFMDASALTGIPLPLIKSY--LFQLLQGLAFCHSHR 126
Query: 197 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQ 256
+ HRD+K N+L++ K+ADFG ++ + ++ T Y PE +
Sbjct: 127 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLGCK 182
Query: 257 LTDKS-DVYSFGVVLVELLT 275
+ D++S G + E++T
Sbjct: 183 YYSTAVDIWSLGCIFAEMVT 202
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F+ + LG G G V + E G A+K +D +++ KL E +NE IL
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++ G ++ HL + E P RF A ++
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-P---HARFYAA-QIV 152
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 153 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 205
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTW 175
E+ E+ IL +I H NV+ L +L+ E + G L+ L ++ LT
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTE 113
Query: 176 EMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAM 231
E ++ + YLHS I H D+K NI+L +R R K+ DFG + I
Sbjct: 114 EEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 168
Query: 232 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE-- 289
D + I GT ++ PE L ++D++S GV+ LL+G P G+T QE
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETL 226
Query: 290 -NVSLAAY 296
NVS Y
Sbjct: 227 ANVSAVNY 234
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTW 175
E+ E+ IL +I H NV+ L +L+ E + G L+ L ++ LT
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTE 112
Query: 176 EMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAM 231
E ++ + YLHS I H D+K NI+L +R R K+ DFG + I
Sbjct: 113 EEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 167
Query: 232 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE-- 289
D + I GT ++ PE L ++D++S GV+ LL+G P G+T QE
Sbjct: 168 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETL 225
Query: 290 -NVSLAAY 296
NVS Y
Sbjct: 226 ANVSAVNY 233
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F+ + LG G G V + E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++ G ++ HL + E P RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-P---HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F+ + LG G G V + E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++ G ++ HL + E P RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-P---HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTW 175
E+ E+ IL +I H NV+ L +L+ E + G L+ L ++ LT
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTE 113
Query: 176 EMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAM 231
E ++ + YLHS I H D+K NI+L +R R K+ DFG + I
Sbjct: 114 EEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 168
Query: 232 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE-- 289
D + I GT ++ PE L ++D++S GV+ LL+G P G+T QE
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETL 226
Query: 290 -NVSLAAY 296
NVS Y
Sbjct: 227 ANVSAVNY 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F+ + LG G G V + E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++ G ++ HL + E P RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-P---HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 70 TNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYKLEEFINEIFIL 125
T+ + + +G+G V + +L G A K KL+ D + KLE E I
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQ--KLE---REARIC 57
Query: 126 SQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEV 185
+ H N+V+L E F LV++ + G L++ + R E + ++
Sbjct: 58 RLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCIQQI 112
Query: 186 AGALAYLHSGASSPIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQG 242
A+ + H + HRD+K N+LL + + K+ADFG + + DQ G
Sbjct: 113 LEAVLHCHQMG---VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ-QAWFGFAG 168
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 281
T GYL PE + D+++ GV+L LL G P +
Sbjct: 169 TPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFW 207
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTW 175
E+ E+ IL +I H NV+ L +L+ E + G L+ L ++ LT
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTE 112
Query: 176 EMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAM 231
E ++ + YLHS I H D+K NI+L +R R K+ DFG + I
Sbjct: 113 EEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 167
Query: 232 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE-- 289
D + I GT ++ PE L ++D++S GV+ LL+G P G+T QE
Sbjct: 168 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETL 225
Query: 290 -NVSLAAY 296
NVS Y
Sbjct: 226 ANVSAVNY 233
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F+ + LG G G V + E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++ G ++ HL + E RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP----HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 95/217 (43%), Gaps = 19/217 (8%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLE-DGRIIAVK---KSKLAVDDEELYKLEEFINEIFILS 126
N F+ ++LG+G G V R + GR A+K K + DE + + E +L
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE----VAHTVTESRVLQ 60
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL-HDRHQNEEYPLTWEMRFRVAIEV 185
H + L + V E+ G L+ HL +R EE RF A E+
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE-----RARFYGA-EI 114
Query: 186 AGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG 245
AL YLHS + +RDIK N++LD+ K+ DFG K + GT
Sbjct: 115 VSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPE 170
Query: 246 YLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
YL PE + + D + GVV+ E++ G+ P ++
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 103/235 (43%), Gaps = 27/235 (11%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
+ F + R Q G G Y + +KK +L+ + + EE E+ IL +I
Sbjct: 21 GSGQFAIVRKCRQKGTGKEYAAKF-------IKKRRLSSSRRGVSR-EEIEREVNILREI 72
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGA 188
H N++ L +L+ E + G L+ L ++ LT + + ++
Sbjct: 73 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES-----LTEDEATQFLKQILDG 127
Query: 189 LAYLHSGASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAMDQTHVTTKIQGTF 244
+ YLHS I H D+K NI+L ++ R K+ DFG + I + + I GT
Sbjct: 128 VHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTP 182
Query: 245 GYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE---NVSLAAY 296
++ PE L ++D++S GV+ LL+G P G T QE N+S Y
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GETKQETLTNISAVNY 235
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 95/217 (43%), Gaps = 19/217 (8%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLE-DGRIIAVK---KSKLAVDDEELYKLEEFINEIFILS 126
N F+ ++LG+G G V R + GR A+K K + DE + + E +L
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE----VAHTVTESRVLQ 60
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL-HDRHQNEEYPLTWEMRFRVAIEV 185
H + L + V E+ G L+ HL +R EE RF A E+
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE-----RARFYGA-EI 114
Query: 186 AGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG 245
AL YLHS + +RDIK N++LD+ K+ DFG K + GT
Sbjct: 115 VSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPE 170
Query: 246 YLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
YL PE + + D + GVV+ E++ G+ P ++
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F+ + LG G G V + E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++ G ++ HL + E P RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-P---HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 17/208 (8%)
Query: 76 NRILGQGGQGTVYKGRLEDGRII----AVKKSKLAVDDEELYKLEEFINEIFILSQINHR 131
R LG+GG Y+ D + + V KS L + ++ E+ EI I +++
Sbjct: 47 GRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLL----KPHQKEKMSTEIAIHKSLDNP 102
Query: 132 NVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAY 191
+VV G + +F +V E +L + LH R + P E R+ + + G + Y
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEP---EARYFMRQTIQG-VQY 157
Query: 192 LHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY 251
LH+ + HRD+K N+ L++ K+ DFG + I D T + GT Y+ PE
Sbjct: 158 LHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAPEV 213
Query: 252 HQSSQLTDKSDVYSFGVVLVELLTGKKP 279
+ + D++S G +L LL GK P
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F+ + LG G G V + E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++ G ++ HL + E P RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE-P---HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F+ + LG G G V + E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++ G ++ HL + E P RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE-P---HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 95/217 (43%), Gaps = 19/217 (8%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLE-DGRIIAVK---KSKLAVDDEELYKLEEFINEIFILS 126
N F+ ++LG+G G V R + GR A+K K + DE + + E +L
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE----VAHTVTESRVLQ 65
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL-HDRHQNEEYPLTWEMRFRVAIEV 185
H + L + V E+ G L+ HL +R EE RF A E+
Sbjct: 66 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE-----RARFYGA-EI 119
Query: 186 AGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG 245
AL YLHS + +RDIK N++LD+ K+ DFG K + GT
Sbjct: 120 VSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPE 175
Query: 246 YLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
YL PE + + D + GVV+ E++ G+ P ++
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 212
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 95/217 (43%), Gaps = 19/217 (8%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLE-DGRIIAVK---KSKLAVDDEELYKLEEFINEIFILS 126
N F+ ++LG+G G V R + GR A+K K + DE + + E +L
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE----VAHTVTESRVLQ 60
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL-HDRHQNEEYPLTWEMRFRVAIEV 185
H + L + V E+ G L+ HL +R EE RF A E+
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE-----RARFYGA-EI 114
Query: 186 AGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG 245
AL YLHS + +RDIK N++LD+ K+ DFG K + GT
Sbjct: 115 VSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPE 170
Query: 246 YLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
YL PE + + D + GVV+ E++ G+ P ++
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F+ + LG G G V + E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++ G ++ HL + E P RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAE-P---HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F+ + LG G G V + E G A+K +D +++ KL E +NE IL
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 117
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++ G ++ HL + E RF A ++
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP----HARFYAA-QIV 172
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 173 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 225
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 226 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 261
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F+ + LG G G V + E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++ G ++ HL + E P RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE-P---HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F+ + LG G G V + E G A+K +D +++ KL E +NE IL
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 91
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++ G ++ HL + E P RF A ++
Sbjct: 92 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE-P---HARFYAA-QIV 146
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 147 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 199
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 200 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 235
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 25/215 (11%)
Query: 73 FNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRN 132
+ + LG G G V+ +AVK K +E F+ E ++ + H
Sbjct: 184 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDK 238
Query: 133 VVKLLGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAY 191
+VKL T+ P+ ++ EF+ G+L L +++ PL + F + ++A +A+
Sbjct: 239 LVKLHAVV--TKEPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDF--SAQIAEGMAF 293
Query: 192 LHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY 251
+ HRD+++ NIL+ K+ADFG ++ A + + PE
Sbjct: 294 IEQRN---YIHRDLRAANILVSASLVCKIADFGLARVGA----------KFPIKWTAPEA 340
Query: 252 HQSSQLTDKSDVYSFGVVLVELLT-GKKPIFSTGN 285
T KSDV+SFG++L+E++T G+ P N
Sbjct: 341 INFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 375
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 124/292 (42%), Gaps = 46/292 (15%)
Query: 65 ELDKATNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYKLEEFIN 120
E + + + V +LG GG G+VY G R+ D +A+K K +++ D EL
Sbjct: 1 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPNGTRVPM 59
Query: 121 EIFILSQINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEM 177
E+ +L +++ V++LL + F L++ P L+ + +R +E E+
Sbjct: 60 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-----EL 114
Query: 178 RFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHV 236
+V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ + V
Sbjct: 115 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTV 168
Query: 237 TTKIQGTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAA 295
T GT Y PE+ + + +S V+S G++L +++ G P E +
Sbjct: 169 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQ 223
Query: 296 YFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
F + H++ CL L RPT EE+
Sbjct: 224 VFFRQRVSSECQHLI--------------------RWCLALRPSDRPTFEEI 255
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTW 175
E+ E+ IL +I H NV+ L +L+ E + G L+ L ++ LT
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES-----LTE 113
Query: 176 EMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAM 231
E ++ + YLHS I H D+K NI+L +R R K+ DFG + I
Sbjct: 114 EEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-- 168
Query: 232 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE-- 289
D + I GT ++ PE L ++D++S GV+ LL+G P G+T QE
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQETL 226
Query: 290 -NVSLAAY 296
NVS Y
Sbjct: 227 ANVSAVNY 234
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 102/235 (43%), Gaps = 27/235 (11%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
+ F + R Q G G Y + +KK +L + + EE E+ IL +I
Sbjct: 35 GSGQFAIVRKCRQKGTGKEYAAKF-------IKKRRLXSSRRGVSR-EEIEREVNILREI 86
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGA 188
H N++ L +L+ E + G L+ L ++ LT + + ++
Sbjct: 87 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES-----LTEDEATQFLKQILDG 141
Query: 189 LAYLHSGASSPIYHRDIKSTNILLDERY----RAKVADFGTSKFIAMDQTHVTTKIQGTF 244
+ YLHS I H D+K NI+L ++ R K+ DFG + I + + I GT
Sbjct: 142 VHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTP 196
Query: 245 GYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE---NVSLAAY 296
++ PE L ++D++S GV+ LL+G P G T QE N+S Y
Sbjct: 197 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GETKQETLTNISAVNY 249
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 21/219 (9%)
Query: 70 TNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYKLEEFINEIFIL 125
T+ + + LG+G V + ++ G+ A K KL+ D + KLE E I
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ--KLE---REARIC 57
Query: 126 SQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEV 185
+ H N+V+L E F LV++ + G L++ + R E + ++
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCIQQI 112
Query: 186 AGALAYLHSGASSPIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQG 242
++ + H I HRD+K N+LL + + K+ADFG + + DQ G
Sbjct: 113 LESVNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAG 168
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 281
T GYL PE + D+++ GV+L LL G P +
Sbjct: 169 TPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFW 207
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 122/286 (42%), Gaps = 46/286 (16%)
Query: 71 NHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYKLEEFINEIFILS 126
+ + V +LG GG G+VY G R+ D +A+K K +++ D EL E+ +L
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPNGTRVPMEVVLLK 62
Query: 127 QINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAI 183
+++ V++LL + F L++ P L+ + +R +E E+
Sbjct: 63 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-----ELARSFFW 117
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
+V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ + V T G
Sbjct: 118 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDG 171
Query: 243 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSM 301
T Y PE+ + + +S V+S G++L +++ G P E + F
Sbjct: 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIRGQVFFRQR 226
Query: 302 RKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ H++ CL L RPT EE+
Sbjct: 227 VSSECQHLI--------------------RWCLALRPSDRPTFEEI 252
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 118 FINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEM 177
++E+ +L Q++H N++KL + LV E G L+ + R + E M
Sbjct: 51 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM 110
Query: 178 RFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYR---AKVADFGTSKFIAMDQT 234
+ +V YLH I HRD+K N+LL+ + R K+ DFG S
Sbjct: 111 K-----QVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF----- 157
Query: 235 HVTTKIQ---GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
V K++ GT Y+ PE + + +K DV+S GV+L LL G P G T QE
Sbjct: 158 EVGGKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPF--GGQTDQE 212
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 103/228 (45%), Gaps = 16/228 (7%)
Query: 73 FNVNRILGQGGQGTVYKGRLEDGRIIAVKKSKLAVD-DEELYKLEEFINEIFILSQINHR 131
F R LG G G V+ L + R +++ ++ D +E+ EI +L ++H
Sbjct: 24 FIFKRKLGSGAFGDVH---LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP 80
Query: 132 NVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAY 191
N++K+ + +V E G L + + Q L+ + ++ ALAY
Sbjct: 81 NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSA-QARGKALSEGYVAELMKQMMNALAY 139
Query: 192 LHSGASSPIYHRDIKSTNILLDE---RYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLD 248
HS + H+D+K NIL + K+ DFG ++ D+ +T GT Y+
Sbjct: 140 FHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH--STNAAGTALYMA 194
Query: 249 PEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAY 296
PE + +T K D++S GVV+ LLTG P TG + +E A Y
Sbjct: 195 PEVFKRD-VTFKCDIWSAGVVMYFLLTGCLPF--TGTSLEEVQQKATY 239
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 21/219 (9%)
Query: 70 TNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYKLEEFINEIFIL 125
T+ + + LG+G V + ++ G+ A K KL+ D + KLE E I
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ--KLE---REARIC 57
Query: 126 SQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEV 185
+ H N+V+L E F LV++ + G L++ + R E + ++
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCIQQI 112
Query: 186 AGALAYLHSGASSPIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQG 242
++ + H I HRD+K N+LL + + K+ADFG + + DQ G
Sbjct: 113 LESVNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAG 168
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIF 281
T GYL PE + D+++ GV+L LL G P +
Sbjct: 169 TPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFW 207
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 34/227 (14%)
Query: 73 FNVNRILGQGGQGTVY--KGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINH 130
F + LG+GG G V+ K +++D A+K+ +L + EL + E+ + E+ L+++ H
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNY-AIKRIRLP--NRELAR-EKVMREVKALAKLEH 62
Query: 131 RNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLH-DRHQNEEYPL----TWEMRFR----- 180
+V+ LE + P LY + R +N + + T E R R
Sbjct: 63 PGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLH 122
Query: 181 VAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTH----V 236
+ +++A A+ +LHS + HRD+K +NI KV DFG AMDQ V
Sbjct: 123 IFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGL--VTAMDQDEEEQTV 177
Query: 237 TTKIQ---------GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELL 274
T + GT Y+ PE + + K D++S G++L ELL
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F+ + LG G G V + E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++ G ++ HL + E P RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-P---HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ ++ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFA 240
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 124/286 (43%), Gaps = 46/286 (16%)
Query: 71 NHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYKLEEFINEIFILS 126
+ + V +LG GG G+VY G R+ D +A+K K +++ D EL E+ +L
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPNGTRVPMEVVLLK 62
Query: 127 QINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAI 183
+++ V++LL + F L++ P L+ + +R +E E+
Sbjct: 63 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-----ELARSFFW 117
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
+V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ + V T G
Sbjct: 118 QVLEAVRHCHNXG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDG 171
Query: 243 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSM 301
T Y PE+ + + +S V+S G++L +++ G P +E + +F
Sbjct: 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF----EHDEEIIRGQVFF---- 223
Query: 302 RKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
++ +L CL L RPT EE+
Sbjct: 224 -----------------RQRVSXECQHLIRWCLALRPSDRPTFEEI 252
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEEL--YKLEEFINEIFILSQINHRNVVKL 136
LG+GG ++ + D V K+ L ++ E+ EI I + H++VV
Sbjct: 25 LGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 137 LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGA 196
G + +F +V E +L + LH R + P E R+ + V G YLH
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEP---EARYYLRQIVLGC-QYLHRNR 137
Query: 197 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQ 256
+ HRD+K N+ L+E K+ DFG + + D T + GT Y+ PE
Sbjct: 138 ---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKG 193
Query: 257 LTDKSDVYSFGVVLVELLTGKKP 279
+ + DV+S G ++ LL GK P
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 118 FINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEM 177
++E+ +L Q++H N++KL + LV E G L+ + R + E M
Sbjct: 68 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM 127
Query: 178 RFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYR---AKVADFGTSKFIAMDQT 234
+ +V YLH I HRD+K N+LL+ + R K+ DFG S
Sbjct: 128 K-----QVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF----- 174
Query: 235 HVTTKIQ---GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
V K++ GT Y+ PE + + +K DV+S GV+L LL G P G T QE
Sbjct: 175 EVGGKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPF--GGQTDQE 229
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEEL--YKLEEFINEIFILSQINHRNVVKL 136
LG+GG ++ + D V K+ L ++ E+ EI I + H++VV
Sbjct: 25 LGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 137 LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGA 196
G + +F +V E +L + LH R + P E R+ + V G YLH
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEP---EARYYLRQIVLGC-QYLHRNR 137
Query: 197 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQ 256
+ HRD+K N+ L+E K+ DFG + + D T + GT Y+ PE
Sbjct: 138 ---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKG 193
Query: 257 LTDKSDVYSFGVVLVELLTGKKP 279
+ + DV+S G ++ LL GK P
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEEL--YKLEEFINEIFILSQINHRNVVKL 136
LG+GG ++ + D V K+ L ++ E+ EI I + H++VV
Sbjct: 29 LGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 86
Query: 137 LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGA 196
G + +F +V E +L + LH R + P E R+ + V G YLH
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEP---EARYYLRQIVLGC-QYLHRNR 141
Query: 197 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQ 256
+ HRD+K N+ L+E K+ DFG + + D T + GT Y+ PE
Sbjct: 142 ---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKG 197
Query: 257 LTDKSDVYSFGVVLVELLTGKKP 279
+ + DV+S G ++ LL GK P
Sbjct: 198 HSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F+ + LG G G V + E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++ G ++ HL + E P RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-P---HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+++D++ +V DFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 122/286 (42%), Gaps = 46/286 (16%)
Query: 71 NHFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYKLEEFINEIFILS 126
+ + V +LG GG G+VY G R+ D +A+K K +++ D EL E+ +L
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPNGTRVPMEVVLLK 62
Query: 127 QINH--RNVVKLLGCCLETE-FPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAI 183
+++ V++LL + F L++ P L+ + +R +E E+
Sbjct: 63 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-----ELARSFFW 117
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
+V A+ + H+ + HRDIK NIL+D R K+ DFG+ A+ + V T G
Sbjct: 118 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDG 171
Query: 243 TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSM 301
T Y PE+ + + +S V+S G++L +++ G P E + F
Sbjct: 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-----EHDEEIIGGQVFFRQR 226
Query: 302 RKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ H++ CL L RPT EE+
Sbjct: 227 VSSECQHLI--------------------RWCLALRPSDRPTFEEI 252
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 17/208 (8%)
Query: 76 NRILGQGGQGTVYKGRLEDGRII----AVKKSKLAVDDEELYKLEEFINEIFILSQINHR 131
R LG+GG Y+ D + + V KS L + ++ E+ EI I +++
Sbjct: 31 GRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLL----KPHQKEKMSTEIAIHKSLDNP 86
Query: 132 NVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAY 191
+VV G + +F +V E +L + LH R + P E R+ + + G + Y
Sbjct: 87 HVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEP---EARYFMRQTIQG-VQY 141
Query: 192 LHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY 251
LH+ + HRD+K N+ L++ K+ DFG + I D + GT Y+ PE
Sbjct: 142 LHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTPNYIAPEV 197
Query: 252 HQSSQLTDKSDVYSFGVVLVELLTGKKP 279
+ + D++S G +L LL GK P
Sbjct: 198 LCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 127/291 (43%), Gaps = 42/291 (14%)
Query: 76 NRILGQGGQGTVYKG-RLEDGRIIAVKKSKL---AVDDEELYKLEEFINEIFILSQINHR 131
N LGQG ++KG R E G + ++++ +D E F ++S+++H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 132 NVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAY 191
++V G C+ + +LV EF+ G+L +L + + W + VA ++A A+ +
Sbjct: 73 HLVLNYGVCVCGDENILVQEFVKFGSLDTYL--KKNKNCINILW--KLEVAKQLAAAMHF 128
Query: 192 LHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKI------QGTFG 245
L + H ++ + NILL R + G FI + ++ + Q
Sbjct: 129 LEENT---LIHGNVCAKNILL---IREEDRKTGNPPFIKLSDPGISITVLPKDILQERIP 182
Query: 246 YLDPEYHQSSQ-LTDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQENVSLAAYFVHSMRK 303
++ PE ++ + L +D +SFG L E+ + G KP+ + + S RK
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA---------------LDSQRK 227
Query: 304 NRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEVSMELNGI 354
+ Y D + K ++ ANL C+D RP+ + +LN +
Sbjct: 228 LQFYE--DRHQLPAPKAAEL---ANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 17/208 (8%)
Query: 76 NRILGQGGQGTVYKGRLEDGRII----AVKKSKLAVDDEELYKLEEFINEIFILSQINHR 131
R LG+GG Y+ D + + V KS L + ++ E+ EI I +++
Sbjct: 47 GRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLL----KPHQKEKMSTEIAIHKSLDNP 102
Query: 132 NVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAY 191
+VV G + +F +V E +L + LH R + P E R+ + + G + Y
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEP---EARYFMRQTIQG-VQY 157
Query: 192 LHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY 251
LH+ + HRD+K N+ L++ K+ DFG + I D + GT Y+ PE
Sbjct: 158 LHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKXLCGTPNYIAPEV 213
Query: 252 HQSSQLTDKSDVYSFGVVLVELLTGKKP 279
+ + D++S G +L LL GK P
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 17/208 (8%)
Query: 76 NRILGQGGQGTVYKGRLEDGRII----AVKKSKLAVDDEELYKLEEFINEIFILSQINHR 131
R LG+GG Y+ D + + V KS L + ++ E+ EI I +++
Sbjct: 47 GRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLL----KPHQKEKMSTEIAIHKSLDNP 102
Query: 132 NVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAY 191
+VV G + +F +V E +L + LH R + P E R+ + + G + Y
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEP---EARYFMRQTIQG-VQY 157
Query: 192 LHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY 251
LH+ + HRD+K N+ L++ K+ DFG + I D + GT Y+ PE
Sbjct: 158 LHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTPNYIAPEV 213
Query: 252 HQSSQLTDKSDVYSFGVVLVELLTGKKP 279
+ + D++S G +L LL GK P
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 26/215 (12%)
Query: 77 RILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFIN-EIFILSQINHRNVVK 135
+++G G G V++ +L + +A+KK + + + F N E+ I+ + H NVV
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKK---------VLQDKRFKNRELQIMRIVKHPNVVD 96
Query: 136 LL------GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
L G + F LV E++P H + P+ + ++ +L
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLY--MYQLLRSL 154
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLD 248
AY+HS I HRDIK N+LLD K+ DFG++K + + +V+ I + Y
Sbjct: 155 AYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSX-ICSRY-YRA 209
Query: 249 PEY-HQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
PE ++ T D++S G V+ EL+ G +P+F
Sbjct: 210 PELIFGATNYTTNIDIWSTGCVMAELMQG-QPLFP 243
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 105/236 (44%), Gaps = 30/236 (12%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQ 127
AT+ + +G G GTVYK R G +A+K ++ +E L + E+ +L +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPI--STVREVALLRR 59
Query: 128 IN---HRNVVKLLGCCLETEFP-----LLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRF 179
+ H NVV+L+ C + LV+E + + L +L D+ P E
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPA--ETIK 115
Query: 180 RVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKF----IAMDQTH 235
+ + L +LH+ I HRD+K NIL+ K+ADFG ++ +A+D
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVV 172
Query: 236 VTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENV 291
V T Y PE S D++S G + E+ +KP+F GN+ + +
Sbjct: 173 V------TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLF-CGNSEADQL 220
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 118/314 (37%), Gaps = 83/314 (26%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------RLEDGRIIAVKKSKLAVDDEELYK 114
+ + + + + + + LG+G G V + + R +AVK K E
Sbjct: 10 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 69
Query: 115 LEEFINEIFILSQINHR-NVVKLLGCCLETEFPLLVY------------------EFIP- 154
L ++E+ IL I H NVV LLG C + PL+V EF+P
Sbjct: 70 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 126
Query: 155 --NGTLYQHLHD----------------------------------RHQNEEYP------ 172
G ++ D + EE P
Sbjct: 127 KTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKD 186
Query: 173 -LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAM 231
LT E + +VA + +L AS HRD+ + NILL E+ K+ DFG ++ I
Sbjct: 187 FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 243
Query: 232 DQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 290
D +V + ++ PE T +SDV+SFGV+L E IFS G +
Sbjct: 244 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------IFSLGASPYPG 296
Query: 291 VSLAAYFVHSMRKN 304
V + F +++
Sbjct: 297 VKIDEEFCRRLKEG 310
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F+ + LG G G V + E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++ G ++ HL + E P RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-P---HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT Y
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEY 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L P S D ++ GV++ E+ G P F+
Sbjct: 205 LAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 22/232 (9%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQ 127
AT+ + +G G GTVYK R G +A+K ++ +E L + E+ +L +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPI--STVREVALLRR 59
Query: 128 IN---HRNVVKLLGCCLETEFP-----LLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRF 179
+ H NVV+L+ C + LV+E + + L +L D+ P E
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPA--ETIK 115
Query: 180 RVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 239
+ + L +LH+ I HRD+K NIL+ K+ADFG ++ +
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVV 172
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENV 291
+ T Y PE S D++S G + E+ +KP+F GN+ + +
Sbjct: 173 V--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLF-CGNSEADQL 220
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 118/314 (37%), Gaps = 83/314 (26%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------RLEDGRIIAVKKSKLAVDDEELYK 114
+ + + + + + + LG+G G V + + R +AVK K E
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 115 LEEFINEIFILSQINHR-NVVKLLGCCLETEFPLLVY------------------EFIP- 154
L ++E+ IL I H NVV LLG C + PL+V EF+P
Sbjct: 77 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 155 --NGTLYQHLHD----------------------------------RHQNEEYP------ 172
G ++ D + EE P
Sbjct: 134 KTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKD 193
Query: 173 -LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAM 231
LT E + +VA + +L AS HRD+ + NILL E+ K+ DFG ++ I
Sbjct: 194 FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 250
Query: 232 DQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 290
D +V + ++ PE T +SDV+SFGV+L E IFS G +
Sbjct: 251 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------IFSLGASPYPG 303
Query: 291 VSLAAYFVHSMRKN 304
V + F +++
Sbjct: 304 VKIDEEFCRRLKEG 317
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 118/314 (37%), Gaps = 83/314 (26%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------RLEDGRIIAVKKSKLAVDDEELYK 114
+ + + + + + + LG+G G V + + R +AVK K E
Sbjct: 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 71
Query: 115 LEEFINEIFILSQINHR-NVVKLLGCCLETEFPLLVY------------------EFIP- 154
L ++E+ IL I H NVV LLG C + PL+V EF+P
Sbjct: 72 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 128
Query: 155 --NGTLYQHLHD----------------------------------RHQNEEYP------ 172
G ++ D + EE P
Sbjct: 129 KTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKD 188
Query: 173 -LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAM 231
LT E + +VA + +L AS HRD+ + NILL E+ K+ DFG ++ I
Sbjct: 189 FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 245
Query: 232 DQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 290
D +V + ++ PE T +SDV+SFGV+L E IFS G +
Sbjct: 246 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------IFSLGASPYPG 298
Query: 291 VSLAAYFVHSMRKN 304
V + F +++
Sbjct: 299 VKIDEEFCRRLKEG 312
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 118/314 (37%), Gaps = 83/314 (26%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------RLEDGRIIAVKKSKLAVDDEELYK 114
+ + + + + + + LG+G G V + + R +AVK K E
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 115 LEEFINEIFILSQINHR-NVVKLLGCCLETEFPLLVY------------------EFIP- 154
L ++E+ IL I H NVV LLG C + PL+V EF+P
Sbjct: 79 L---MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 135
Query: 155 --NGTLYQHLHD----------------------------------RHQNEEYP------ 172
G ++ D + EE P
Sbjct: 136 KTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKD 195
Query: 173 -LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAM 231
LT E + +VA + +L AS HRD+ + NILL E+ K+ DFG ++ I
Sbjct: 196 FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 252
Query: 232 DQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 290
D +V + ++ PE T +SDV+SFGV+L E IFS G +
Sbjct: 253 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE-------IFSLGASPYPG 305
Query: 291 VSLAAYFVHSMRKN 304
V + F +++
Sbjct: 306 VKIDEEFCRRLKEG 319
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 127/291 (43%), Gaps = 42/291 (14%)
Query: 76 NRILGQGGQGTVYKG-RLEDGRIIAVKKSKL---AVDDEELYKLEEFINEIFILSQINHR 131
N LGQG ++KG R E G + ++++ +D E F ++S+++H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 132 NVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAY 191
++V G C + +LV EF+ G+L +L + + W++ VA ++A A+ +
Sbjct: 73 HLVLNYGVCFCGDENILVQEFVKFGSLDTYL--KKNKNCINILWKL--EVAKQLAWAMHF 128
Query: 192 LHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKI------QGTFG 245
L + H ++ + NILL R + G FI + ++ + Q
Sbjct: 129 LEENT---LIHGNVCAKNILL---IREEDRKTGNPPFIKLSDPGISITVLPKDILQERIP 182
Query: 246 YLDPEYHQSSQ-LTDKSDVYSFGVVLVELLT-GKKPIFSTGNTSQENVSLAAYFVHSMRK 303
++ PE ++ + L +D +SFG L E+ + G KP+ + + S RK
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA---------------LDSQRK 227
Query: 304 NRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEVSMELNGI 354
+ Y D + K ++ ANL C+D RP+ + +LN +
Sbjct: 228 LQFYE--DRHQLPAPKAAEL---ANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 16/208 (7%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G+G G+V K G+I+AVK+ + VD++E +L ++ ++ + +V+
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQL--LMDLDVVMRSSDCPYIVQFY 87
Query: 138 GCCLETEFPLLVYEFIPNG--TLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSG 195
G + E + Y++++ + + E+ ++ + AL +L
Sbjct: 88 GALFREGDCWICMELMSTSFDKFYKYVYSVLDDV---IPEEILGKITLATVKALNHLKEN 144
Query: 196 ASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPE---YH 252
I HRDIK +NILLD K+ DFG S + + T+ G Y+ PE
Sbjct: 145 LK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLV--DSIAKTRDAGCRPYMAPERIDPS 200
Query: 253 QSSQLTD-KSDVYSFGVVLVELLTGKKP 279
S Q D +SDV+S G+ L EL TG+ P
Sbjct: 201 ASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 18/217 (8%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLE-DGRIIAVK---KSKLAVDDEELYKLEEFINEIFILS 126
N F ++LG+G G V + + GR A+K K + DE + L E +L
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTL----TENRVLQ 206
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL-HDRHQNEEYPLTWEMRFRVAIEV 185
H + L + V E+ G L+ HL +R +E+ RF A E+
Sbjct: 207 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED-----RARFYGA-EI 260
Query: 186 AGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG 245
AL YLHS + + +RD+K N++LD+ K+ DFG K D + T GT
Sbjct: 261 VSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPE 317
Query: 246 YLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
YL PE + + D + GVV+ E++ G+ P ++
Sbjct: 318 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 354
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 101/233 (43%), Gaps = 21/233 (9%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLE-EFINEIFILS 126
AT+ + +G G GTVYK R G +A+K ++ L + E+ +L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 127 QIN---HRNVVKLLGCCLETEFP-----LLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMR 178
++ H NVV+L+ C + LV+E + + L +L D+ P E
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPA--ETI 122
Query: 179 FRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTT 238
+ + L +LH+ I HRD+K NIL+ K+ADFG ++ + T
Sbjct: 123 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LT 177
Query: 239 KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENV 291
+ T Y PE S D++S G + E+ +KP+F GN+ + +
Sbjct: 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLF-CGNSEADQL 228
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 18/217 (8%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLE-DGRIIAVK---KSKLAVDDEELYKLEEFINEIFILS 126
N F ++LG+G G V + + GR A+K K + DE + L E +L
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTL----TENRVLQ 203
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHL-HDRHQNEEYPLTWEMRFRVAIEV 185
H + L + V E+ G L+ HL +R +E+ RF A E+
Sbjct: 204 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED-----RARFYGA-EI 257
Query: 186 AGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG 245
AL YLHS + + +RD+K N++LD+ K+ DFG K D + T GT
Sbjct: 258 VSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPE 314
Query: 246 YLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
YL PE + + D + GVV+ E++ G+ P ++
Sbjct: 315 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 351
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 122/242 (50%), Gaps = 37/242 (15%)
Query: 62 SSKELDKATNHFNVNRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFIN 120
S KE+D+ F V R+ GQG GTV G+ + G +A+KK + D E I
Sbjct: 18 SRKEMDR----FQVERMAGQGTFGTVQLGKEKSTGMSVAIKK---VIQDPRFRNRELQIM 70
Query: 121 EIFILSQINHRNVVKL------LGCCLETEFPL-LVYEFIPNGTLYQHLHDRHQNEEYPL 173
+ L+ ++H N+V+L LG + L +V E++P+ TL++ + ++ + P
Sbjct: 71 Q--DLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPP 127
Query: 174 TWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMD 232
++ + ++ ++ LH + + + HRDIK N+L++E K+ DFG++K ++
Sbjct: 128 PILIKVFL-FQLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPS 185
Query: 233 QTHVTTKIQGTFGYLDPEYHQSSQL-------TDKSDVYSFGVVLVELLTGKKPIFSTGN 285
+ +V Y+ Y+++ +L T D++S G + E++ G +PIF N
Sbjct: 186 EPNV--------AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG-EPIFRGDN 236
Query: 286 TS 287
++
Sbjct: 237 SA 238
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 22/232 (9%)
Query: 69 ATNHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQ 127
AT+ + +G G GTVYK R G +A+K ++ +E L + E+ +L +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPI--STVREVALLRR 59
Query: 128 IN---HRNVVKLLGCCLETEFP-----LLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRF 179
+ H NVV+L+ C + LV+E + + L +L D+ P E
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPA--ETIK 115
Query: 180 RVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTK 239
+ + L +LH+ I HRD+K NIL+ K+ADFG ++ +
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVV 172
Query: 240 IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENV 291
+ T Y PE S D++S G + E+ +KP+F GN+ + +
Sbjct: 173 V--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLF-CGNSEADQL 220
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 108/221 (48%), Gaps = 28/221 (12%)
Query: 79 LGQGGQGTVYKGR--LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL 136
LG+G TVYKG+ L D ++A+K+ +L + EE I E+ +L + H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDN-LVALKEIRL--EHEEGAPCTA-IREVSLLKDLKHANIVTL 65
Query: 137 LGCCLETEFPLLVYEFIPNGTLYQHLHD-----RHQNEEYPLTWEMRFRVAIEVAGALAY 191
+ LV+E++ + L Q+L D N + L +R LAY
Sbjct: 66 HDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLR---------GLAY 115
Query: 192 LHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPE- 250
H + HRD+K N+L++ER K+ADFG ++ ++ ++ T Y P+
Sbjct: 116 CHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPDI 171
Query: 251 YHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENV 291
S+ + + D++ G + E+ TG +P+F G+T +E +
Sbjct: 172 LLGSTDYSTQIDMWGVGCIFYEMATG-RPLFP-GSTVEEQL 210
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 104/236 (44%), Gaps = 25/236 (10%)
Query: 79 LGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+GQG G V+K R + G+ +A+KK L +++E + + + EI IL + H NVV L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV-LMENEKEGFPITA-LREIKILQLLKHENVVNLI 83
Query: 138 GCCLETEFPL--------LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
C P LV++F + L N T RV + L
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFCEH-----DLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGY 246
Y+H I HRD+K+ N+L+ K+ADFG ++ ++ + + T Y
Sbjct: 139 YYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 247 LDPEYHQSSQ-LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSM 301
PE + D++ G ++ E+ T + PI GNT Q ++L + S+
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQ-GNTEQHQLALISQLCGSI 249
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 104/236 (44%), Gaps = 25/236 (10%)
Query: 79 LGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+GQG G V+K R + G+ +A+KK L +++E + + + EI IL + H NVV L+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKV-LMENEKEGFPITA-LREIKILQLLKHENVVNLI 82
Query: 138 GCCLETEFPL--------LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
C P LV++F + L N T RV + L
Sbjct: 83 EICRTKASPYNRCKGSIYLVFDFCEHD-----LAGLLSNVLVKFTLSEIKRVMQMLLNGL 137
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGY 246
Y+H I HRD+K+ N+L+ K+ADFG ++ ++ + + T Y
Sbjct: 138 YYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 247 LDPEYHQSSQ-LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSM 301
PE + D++ G ++ E+ T + PI GNT Q ++L + S+
Sbjct: 195 RPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQ-GNTEQHQLALISQLCGSI 248
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 104/236 (44%), Gaps = 25/236 (10%)
Query: 79 LGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+GQG G V+K R + G+ +A+KK L +++E + + + EI IL + H NVV L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV-LMENEKEGFPITA-LREIKILQLLKHENVVNLI 83
Query: 138 GCCLETEFPL--------LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
C P LV++F + L N T RV + L
Sbjct: 84 EICRTKASPYNRCKASIYLVFDFCEH-----DLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGY 246
Y+H I HRD+K+ N+L+ K+ADFG ++ ++ + + T Y
Sbjct: 139 YYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 247 LDPEYHQSSQ-LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSM 301
PE + D++ G ++ E+ T + PI GNT Q ++L + S+
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQ-GNTEQHQLALISQLCGSI 249
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 31/209 (14%)
Query: 85 GTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLGC----- 139
G V+K +L + +AVK + D++ ++ E E++ L + H N+++ +G
Sbjct: 38 GCVWKAQLLN-EYVAVKI--FPIQDKQSWQNE---YEVYSLPGMKHENILQFIGAEKRGT 91
Query: 140 CLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHS----- 194
++ + L+ F G+L L + ++W +A +A LAYLH
Sbjct: 92 SVDVDL-WLITAFHEKGSLSDFL------KANVVSWNELCHIAETMARGLAYLHEDIPGL 144
Query: 195 --GASSPIYHRDIKSTNILLDERYRAKVADFGTS-KFIAMDQTHVTTKIQGTFGYLDPEY 251
G I HRDIKS N+LL A +ADFG + KF A T GT Y+ PE
Sbjct: 145 KDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEV 204
Query: 252 HQSSQLTDKS-----DVYSFGVVLVELLT 275
+ + + D+Y+ G+VL EL +
Sbjct: 205 LEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 104/236 (44%), Gaps = 25/236 (10%)
Query: 79 LGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+GQG G V+K R + G+ +A+KK L +++E + + + EI IL + H NVV L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV-LMENEKEGFPITA-LREIKILQLLKHENVVNLI 83
Query: 138 GCCLETEFPL--------LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
C P LV++F + L N T RV + L
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFCEH-----DLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 190 AYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGY 246
Y+H I HRD+K+ N+L+ K+ADFG ++ ++ + + T Y
Sbjct: 139 YYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 247 LDPEYHQSSQ-LTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSM 301
PE + D++ G ++ E+ T + PI GNT Q ++L + S+
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQ-GNTEQHQLALISQLCGSI 249
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEEL--YKLEEFINEIFILSQINHRNVVKL 136
LG+GG ++ + D V K+ L ++ E+ EI I + H++VV
Sbjct: 23 LGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 80
Query: 137 LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGA 196
G + +F +V E +L + LH R + P E R+ + V G YLH
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEP---EARYYLRQIVLGC-QYLHRNR 135
Query: 197 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQ 256
+ HRD+K N+ L+E K+ DFG + + D + GT Y+ PE
Sbjct: 136 ---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKG 191
Query: 257 LTDKSDVYSFGVVLVELLTGKKP 279
+ + DV+S G ++ LL GK P
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPP 214
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEEL--YKLEEFINEIFILSQINHRNVVKL 136
LG+GG ++ + D V K+ L ++ E+ EI I + H++VV
Sbjct: 47 LGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 104
Query: 137 LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGA 196
G + +F +V E +L + LH R + P E R+ + V G YLH
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEP---EARYYLRQIVLGC-QYLHRNR 159
Query: 197 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQ 256
+ HRD+K N+ L+E K+ DFG + + D + GT Y+ PE
Sbjct: 160 ---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKG 215
Query: 257 LTDKSDVYSFGVVLVELLTGKKP 279
+ + DV+S G ++ LL GK P
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 13/203 (6%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEEL--YKLEEFINEIFILSQINHRNVVKL 136
LG+GG ++ + D V K+ L ++ E+ EI I + H++VV
Sbjct: 49 LGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 106
Query: 137 LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGA 196
G + +F +V E +L + LH R + P E R+ + V G YLH
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEP---EARYYLRQIVLGC-QYLHRNR 161
Query: 197 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQ 256
+ HRD+K N+ L+E K+ DFG + + D + GT Y+ PE
Sbjct: 162 ---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKG 217
Query: 257 LTDKSDVYSFGVVLVELLTGKKP 279
+ + DV+S G ++ LL GK P
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 71 NHFNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKL---EEFINEIFILS 126
+ F+ + LG G G V + E G A+K +D +++ KL E +NE IL
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK----ILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 127 QINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
+N +VKL + +V E++ G ++ HL + E RF A ++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP----HARFYAA-QIV 151
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
YLHS + +RD+K N+L+D++ +V DFG +K + T + GT
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEA 204
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
L PE S D ++ GV++ E+ G P F+
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 23/216 (10%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLE---EFINEIFILS 126
H+ + LG G G V G + G +AVK ++ +++ L+ + EI L
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVK----ILNRQKIRSLDVVGKIKREIQNLK 66
Query: 127 QINHRNVVKLLGC-CLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEV 185
H +++KL T+F +V E++ G L+ ++ + EE E R R+ ++
Sbjct: 67 LFRHPHIIKLYQVISTPTDF-FMVMEYVSGGELFDYICKHGRVEEM----EAR-RLFQQI 120
Query: 186 AGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG 245
A+ Y H + HRD+K N+LLD AK+ADFG S ++ D + T G+
Sbjct: 121 LSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRTSC-GSPN 175
Query: 246 YLDPEYHQSSQL--TDKSDVYSFGVVLVELLTGKKP 279
Y PE S +L + D++S GV+L LL G P
Sbjct: 176 YAAPEV-ISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 16/176 (9%)
Query: 117 EFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWE 176
+ + E+ +L ++H N++KL + LV E G L+ + R + E
Sbjct: 82 KLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVI 141
Query: 177 MRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYR---AKVADFGTSKFIAMDQ 233
++ +V + YLH I HRD+K N+LL+ + + K+ DFG S +Q
Sbjct: 142 IK-----QVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE-NQ 192
Query: 234 THVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE 289
+ ++ GT Y+ PE + + +K DV+S GV+L LL G P G T QE
Sbjct: 193 KKMKERL-GTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPF--GGQTDQE 244
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 20/224 (8%)
Query: 70 TNHFNVNRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
++ F + +LG+G G V + G I+A+KK + D+ L+ L + EI IL
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKK--IEPFDKPLFALRT-LREIKILKHF 66
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGA 188
H N++ + F +I + LH + L+ + + A
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM--LSDDHIQYFIYQTLRA 124
Query: 189 LAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTFG 245
+ LH S + HRD+K +N+L++ KV DFG ++ I A D + T + G
Sbjct: 125 VKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 246 YLDPEYHQSSQLTDKS-------DVYSFGVVLVELLTGKKPIFS 282
Y+ ++++ ++ S DV+S G +L EL ++PIF
Sbjct: 182 YVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFP 224
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 127/297 (42%), Gaps = 50/297 (16%)
Query: 77 RILGQGGQGT-VYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVK 135
+ILG G GT V++G + GR +AVK+ + D L +++ + +H NV++
Sbjct: 21 KILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIK------LLTESDDHPNVIR 73
Query: 136 LLGCCLETEFPLLVYEFIPNGTLYQHLHDRH-QNEEYPLTWEMR-FRVAIEVAGALAYLH 193
C T+ L + + N L + ++ +E L E + ++A +A+LH
Sbjct: 74 YY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 132
Query: 194 SGASSPIYHRDIKSTNILLD-------------ERYRAKVADFGTSKFIAMDQTHVTTKI 240
S I HRD+K NIL+ E R ++DFG K + Q+ T +
Sbjct: 133 SLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNL 189
Query: 241 Q---GTFGYLDPEYHQSS-------QLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 290
GT G+ PE + S +LT D++S G V +L+ K F + + N
Sbjct: 190 NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN 249
Query: 291 VSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ + + D++ L ++ I +L + +D + KRPT +V
Sbjct: 250 IIRGIFSL-------------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 293
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 19/190 (10%)
Query: 95 GRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIP 154
+II KK L+ D + KLE E I + H N+V+L E F LV++ +
Sbjct: 61 AKIINTKK--LSARDHQ--KLE---REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVT 113
Query: 155 NGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDE 214
G L++ + R E + ++ ++ ++H I HRD+K N+LL
Sbjct: 114 GGELFEDIVAREYYSEADAS-----HCIHQILESVNHIHQ---HDIVHRDLKPENLLLAS 165
Query: 215 RYRA---KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLV 271
+ + K+ADFG + + +Q GT GYL PE + D+++ GV+L
Sbjct: 166 KCKGAAVKLADFGLAIEVQGEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILY 224
Query: 272 ELLTGKKPIF 281
LL G P +
Sbjct: 225 ILLVGYPPFW 234
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 100/225 (44%), Gaps = 20/225 (8%)
Query: 78 ILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
ILG G G V+K + +K + + + EE NEI +++Q++H N+++L
Sbjct: 96 ILGGGRFGQVHKC---EETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLY 152
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
+LV E++ G L+ DR +E Y LT ++ + ++H
Sbjct: 153 DAFESKNDIVLVMEYVDGGELF----DRIIDESYNLTELDTILFMKQICEGIRHMHQMY- 207
Query: 198 SPIYHRDIKSTNILLDER--YRAKVADFGTSKFIAMDQTHVTTKIQGTFG---YLDPEYH 252
I H D+K NIL R + K+ DFG ++ + K++ FG +L PE
Sbjct: 208 --ILHLDLKPENILCVNRDAKQIKIIDFGLAR-----RYKPREKLKVNFGTPEFLAPEVV 260
Query: 253 QSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYF 297
++ +D++S GV+ LL+G P + N LA +
Sbjct: 261 NYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRW 305
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 15/228 (6%)
Query: 70 TNHFNVNRILGQGGQGTVY----KGRLEDGRIIAVKKSKLAVDDE-ELYKLEEFINEIFI 124
+ ++ LG G G V+ K + ++ + +KK K+ D E KL + EI I
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 125 LSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIE 184
LS++ H N++K+L F LV E +G DRH + PL FR +
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLA-SYIFR---Q 138
Query: 185 VAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 244
+ A+ YL I HRDIK NI++ E + K+ DFG++ ++ + T GT
Sbjct: 139 LVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT--FCGTI 193
Query: 245 GYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENV 291
Y PE + +++S GV L L+ + P T + +
Sbjct: 194 EYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAI 241
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 23/174 (13%)
Query: 121 EIFILSQIN-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRF 179
E+ +L Q HRNV++L+ E + LV+E + G++ H+H R E +
Sbjct: 60 EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS----- 114
Query: 180 RVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYR---AKVADFGTSKFIAM--DQT 234
V +VA AL +LH+ I HRD+K NIL + + K+ DFG I + D +
Sbjct: 115 VVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCS 171
Query: 235 HVTTK----IQGTFGYLDPE----YHQSSQLTDK-SDVYSFGVVLVELLTGKKP 279
++T G+ Y+ PE + + + + DK D++S GV+L LL+G P
Sbjct: 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 20/224 (8%)
Query: 70 TNHFNVNRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
++ F + +LG+G G V + G I+A+KK + D+ L+ L + EI IL
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKK--IEPFDKPLFALRT-LREIKILKHF 66
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGA 188
H N++ + F +I + LH + L+ + + A
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM--LSDDHIQYFIYQTLRA 124
Query: 189 LAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVTTKIQGTFG 245
+ LH S + HRD+K +N+L++ KV DFG ++ I A D + T + G
Sbjct: 125 VKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVE 181
Query: 246 YLDPEYHQSSQLTDKS-------DVYSFGVVLVELLTGKKPIFS 282
++ ++++ ++ S DV+S G +L EL ++PIF
Sbjct: 182 FVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFP 224
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 24/220 (10%)
Query: 71 NHFNVNRILGQGGQGTVY------KGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFI 124
N F ++LG+G G V GR +I+ KK + DE + L E N +
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKIL--KKEVIVAKDEVAHTLTE--NRVL- 62
Query: 125 LSQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHL-HDRHQNEEYPLTWEMRFRVA 182
Q + + L +T L V E+ G L+ HL +R +E+ RF A
Sbjct: 63 --QNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED-----RARFYGA 115
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
E+ AL YLHS + + +RD+K N++LD+ K+ DFG K D G
Sbjct: 116 -EIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCG 171
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
T YL PE + + D + GVV+ E++ G+ P ++
Sbjct: 172 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 211
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLE---EFINEIFILS 126
H+ + LG G G V G + G +AVK ++ +++ L+ + EI L
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVK----ILNRQKIRSLDVVGKIKREIQNLK 66
Query: 127 QINHRNVVKLLGC-CLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEV 185
H +++KL T+F +V E++ G L+ ++ + EE E R R+ ++
Sbjct: 67 LFRHPHIIKLYQVISTPTDF-FMVMEYVSGGELFDYICKHGRVEEM----EAR-RLFQQI 120
Query: 186 AGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG 245
A+ Y H + HRD+K N+LLD AK+ADFG S M G+
Sbjct: 121 LSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNM--MSDGEFLRDSCGSPN 175
Query: 246 YLDPEYHQSSQL--TDKSDVYSFGVVLVELLTGKKP 279
Y PE S +L + D++S GV+L LL G P
Sbjct: 176 YAAPEV-ISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 127/306 (41%), Gaps = 40/306 (13%)
Query: 78 ILGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
I +G G V+K +L + +AVK + D++ ++ E EIF + H N+++ +
Sbjct: 22 IKARGRFGCVWKAQLMND-FVAVKI--FPLQDKQSWQSE---REIFSTPGMKHENLLQFI 75
Query: 138 -----GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYL 192
G LE E L+ F G+L +L +TW VA ++ L+YL
Sbjct: 76 AAEKRGSNLEVEL-WLITAFHDKGSLTDYLKGN------IITWNELCHVAETMSRGLSYL 128
Query: 193 HS--------GASSPIYHRDIKSTNILLDERYRAKVADFGTS-KFIAMDQTHVTTKIQGT 243
H G I HRD KS N+LL A +ADFG + +F T GT
Sbjct: 129 HEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGT 188
Query: 244 FGYLDPEYHQSSQLTDKS-----DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFV 298
Y+ PE + + + D+Y+ G+VL EL++ K + G + +
Sbjct: 189 RRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKA--ADGPVDEYMLPFEEEIG 246
Query: 299 HSMRKNRLYHILDDQVMKLGKKNQIVAFANLA------ERCLDLNGKKRPTMEEVSMELN 352
L ++ + M+ K+ + LA E C D + + R + V ++
Sbjct: 247 QHPSLEELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEARLSAGCVEERVS 306
Query: 353 GIRGSI 358
IR S+
Sbjct: 307 LIRRSV 312
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 20/224 (8%)
Query: 70 TNHFNVNRILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
++ F + +LG+G G V + G I+A+KK + D+ L+ L + EI IL
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKK--IEPFDKPLFALRT-LREIKILKHF 66
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGA 188
H N++ + F +I + LH + L+ + + A
Sbjct: 67 KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM--LSDDHIQYFIYQTLRA 124
Query: 189 LAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVT------TK 239
+ LH S + HRD+K +N+L++ KV DFG ++ I A D + T T+
Sbjct: 125 VKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 240 IQGTFGYLDPEYH-QSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
T Y PE S++ + DV+S G +L EL ++PIF
Sbjct: 182 XVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFP 224
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 24/220 (10%)
Query: 71 NHFNVNRILGQGGQGTVY------KGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFI 124
N F ++LG+G G V GR +I+ KK + DE + L E N +
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKIL--KKEVIVAKDEVAHTLTE--NRVL- 63
Query: 125 LSQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHL-HDRHQNEEYPLTWEMRFRVA 182
Q + + L +T L V E+ G L+ HL +R +E+ RF A
Sbjct: 64 --QNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED-----RARFYGA 116
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
E+ AL YLHS + + +RD+K N++LD+ K+ DFG K D G
Sbjct: 117 -EIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCG 172
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
T YL PE + + D + GVV+ E++ G+ P ++
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 212
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 24/220 (10%)
Query: 71 NHFNVNRILGQGGQGTVY------KGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFI 124
N F ++LG+G G V GR +I+ KK + DE + L E N +
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKIL--KKEVIVAKDEVAHTLTE--NRVL- 64
Query: 125 LSQINHRNVVKLLGCCLETEFPL-LVYEFIPNGTLYQHL-HDRHQNEEYPLTWEMRFRVA 182
Q + + L +T L V E+ G L+ HL +R +E+ RF A
Sbjct: 65 --QNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED-----RARFYGA 117
Query: 183 IEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
E+ AL YLHS + + +RD+K N++LD+ K+ DFG K D G
Sbjct: 118 -EIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCG 173
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
T YL PE + + D + GVV+ E++ G+ P ++
Sbjct: 174 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 213
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 11/212 (5%)
Query: 77 RILGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVK 135
R+LG+GG G V+ +++ G++ A KK ++ + + E IL++++ R +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRL-KKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 136 LLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMR--FRVAIEVAGALAYLH 193
L ET+ L + I NG ++ H + +E+ P E R F A V+G L +LH
Sbjct: 250 L-AYAFETKTDLCLVMTIMNGGDIRY-HIYNVDEDNPGFQEPRAIFYTAQIVSG-LEHLH 306
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
I +RD+K N+LLD+ +++D G + + QT T GT G++ PE
Sbjct: 307 Q---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLL 362
Query: 254 SSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
+ D ++ GV L E++ + P + G
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 40/218 (18%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEI---------FILSQIN 129
+G+G G V++G L G +AVK + D++ ++ E N + FI S +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFS-SRDEQSWFRETEIYNTVLLRHDNILGFIASDMT 73
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
RN L L+ + +G+LY L R E + + R+A+ A L
Sbjct: 74 SRNSSTQL---------WLITHYHEHGSLYDFLQ-RQTLEPH-----LALRLAVSAACGL 118
Query: 190 AYLH-----SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV---TTKIQ 241
A+LH + I HRD KS N+L+ + +AD G + + ++
Sbjct: 119 AHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV 178
Query: 242 GTFGYLDPEYHQSSQLTD------KSDVYSFGVVLVEL 273
GT Y+ PE TD +D+++FG+VL E+
Sbjct: 179 GTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 11/212 (5%)
Query: 77 RILGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVK 135
R+LG+GG G V+ +++ G++ A KK ++ + + E IL++++ R +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRL-KKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 136 LLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMR--FRVAIEVAGALAYLH 193
L ET+ L + I NG ++ H + +E+ P E R F A V+G L +LH
Sbjct: 250 L-AYAFETKTDLCLVMTIMNGGDIRY-HIYNVDEDNPGFQEPRAIFYTAQIVSG-LEHLH 306
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
I +RD+K N+LLD+ +++D G + + QT T GT G++ PE
Sbjct: 307 Q---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLL 362
Query: 254 SSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
+ D ++ GV L E++ + P + G
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 11/212 (5%)
Query: 77 RILGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVK 135
R+LG+GG G V+ +++ G++ A KK ++ + + E IL++++ R +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRL-KKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 136 LLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMR--FRVAIEVAGALAYLH 193
L ET+ L + I NG ++ H + +E+ P E R F A V+G L +LH
Sbjct: 250 L-AYAFETKTDLCLVMTIMNGGDIRY-HIYNVDEDNPGFQEPRAIFYTAQIVSG-LEHLH 306
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
I +RD+K N+LLD+ +++D G + + QT T GT G++ PE
Sbjct: 307 Q---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLL 362
Query: 254 SSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
+ D ++ GV L E++ + P + G
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 11/212 (5%)
Query: 77 RILGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVK 135
R+LG+GG G V+ +++ G++ A KK ++ + + E IL++++ R +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRL-KKRKGYQGAMVEKKILAKVHSRFIVS 249
Query: 136 LLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMR--FRVAIEVAGALAYLH 193
L ET+ L + I NG ++ H + +E+ P E R F A V+G L +LH
Sbjct: 250 L-AYAFETKTDLCLVMTIMNGGDIRY-HIYNVDEDNPGFQEPRAIFYTAQIVSG-LEHLH 306
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
I +RD+K N+LLD+ +++D G + + QT T GT G++ PE
Sbjct: 307 Q---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLL 362
Query: 254 SSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
+ D ++ GV L E++ + P + G
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 127/294 (43%), Gaps = 42/294 (14%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVK--- 135
+G+G G V + R V K++ + + Y + + EI IL + H NV+
Sbjct: 51 IGEGAYGMVSSA-YDHVRKTRVAIKKISPFEHQTY-CQRTLREIQILLRFRHENVIGIRD 108
Query: 136 -LLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHS 194
L LE + + + + LY+ L + + ++ + ++ L Y+HS
Sbjct: 109 ILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYF------LYQILRGLKYIHS 162
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI--AMDQTHVTTKIQGTFGYLDPEYH 252
+ HRD+K +N+L++ K+ DFG ++ D T T+ T Y PE
Sbjct: 163 AN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIM 219
Query: 253 QSSQLTDKS-DVYSFGVVLVELLTGKKPIFS--------------TGNTSQENVSLAAYF 297
+S+ KS D++S G +L E+L+ +PIF G+ SQE+++
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSPSQEDLNC---- 274
Query: 298 VHSMRKNRLYHILDDQV----MKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ +M+ L + KL K+ A +L +R L N KR T+EE
Sbjct: 275 IINMKARNYLQSLPSKTKVAWAKLFPKSDSKAL-DLLDRMLTFNPNKRITVEEA 327
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 126/299 (42%), Gaps = 58/299 (19%)
Query: 77 RILGQGGQGT-VYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVK 135
+ILG G GT V++G + GR +AVK+ + D L +++ + +H NV++
Sbjct: 39 KILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIK------LLTESDDHPNVIR 91
Query: 136 LLGCCLETEFPLLVYEFIPNGTLYQHLHDRH--------QNEEYPLTWEMRFRVAIEVAG 187
C T+ L + + N L + ++ Q E P++ + ++A
Sbjct: 92 YY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPIS------LLRQIAS 144
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLD-------------ERYRAKVADFGTSKFIAMDQT 234
+A+LHS I HRD+K NIL+ E R ++DFG K + Q
Sbjct: 145 GVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 201
Query: 235 HVTTKIQ---GTFGYLDPEYHQSS---QLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ GT G+ PE + S +LT D++S G V +L+ K F + +
Sbjct: 202 XFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 261
Query: 289 ENVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
N+ + + D++ L ++ I +L + +D + KRPT +V
Sbjct: 262 SNIIRGIFSL-------------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 307
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 126/299 (42%), Gaps = 58/299 (19%)
Query: 77 RILGQGGQGT-VYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVK 135
+ILG G GT V++G + GR +AVK+ + D L +++ + +H NV++
Sbjct: 39 KILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIK------LLTESDDHPNVIR 91
Query: 136 LLGCCLETEFPLLVYEFIPNGTLYQHLHDRH--------QNEEYPLTWEMRFRVAIEVAG 187
C T+ L + + N L + ++ Q E P++ + ++A
Sbjct: 92 YY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPIS------LLRQIAS 144
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLD-------------ERYRAKVADFGTSKFIAMDQT 234
+A+LHS I HRD+K NIL+ E R ++DFG K + Q
Sbjct: 145 GVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 201
Query: 235 HVTTKIQ---GTFGYLDPEYHQSS---QLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ GT G+ PE + S +LT D++S G V +L+ K F + +
Sbjct: 202 XFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 261
Query: 289 ENVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
N+ + + D++ L ++ I +L + +D + KRPT +V
Sbjct: 262 SNIIRGIFSL-------------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 307
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 91/199 (45%), Gaps = 12/199 (6%)
Query: 79 LGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEE-FINEIFILSQINHRNVVKL 136
LG+G TVYK R ++ +I+A+KK KL E + + EI +L +++H N++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 137 LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGA 196
L LV++F + L ++ LT + L YLH
Sbjct: 78 LDAFGHKSNISLVFDF-----METDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW 132
Query: 197 SSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQ 256
I HRD+K N+LLDE K+ADFG +K ++ T Y PE ++
Sbjct: 133 ---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWYRAPELLFGAR 188
Query: 257 LTDKS-DVYSFGVVLVELL 274
+ D+++ G +L ELL
Sbjct: 189 MYGVGVDMWAVGCILAELL 207
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
L + G ++KGR + G I VK L V D K +F E L +H NV+ +LG
Sbjct: 18 LNENHSGELWKGRWQ-GNDIVVKV--LKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLG 74
Query: 139 CC--LETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGA 196
C P L+ + P G+LY L H+ + + + A++ A A+LH+
Sbjct: 75 ACQSPPAPHPTLITHWXPYGSLYNVL---HEGTNFVVDQSQAVKFALDXARGXAFLHT-- 129
Query: 197 SSPIYHRD-IKSTNILLDERYRAKV--ADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQ 253
P+ R + S ++ +DE A++ AD S F + + + ++ PE Q
Sbjct: 130 LEPLIPRHALNSRSVXIDEDXTARISXADVKFS-FQSPGRXYAP-------AWVAPEALQ 181
Query: 254 -SSQLTDK--SDVYSFGVVLVELLTGKKPIFSTGN 285
+ T++ +D +SF V+L EL+T + P N
Sbjct: 182 KKPEDTNRRSADXWSFAVLLWELVTREVPFADLSN 216
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 49/286 (17%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL- 136
+G+G G V ++ +A+KK ++ + + Y + + EI IL + H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKK--ISPFEHQTY-CQRTLREIKILLRFRHENIIGIN 87
Query: 137 ---LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+E + + + + LY+ L +H + ++ + ++ L Y+H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF------LYQILRGLKYIH 141
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQGTFGYLDPEY 251
S + HRD+K +N+LL+ K+ DFG ++ D H T+ T Y PE
Sbjct: 142 SAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS--------------TGNTSQENVSLAAY 296
+S+ KS D++S G +L E+L+ +PIF G+ SQE+++
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 257
Query: 297 FVHSMRKNRLYHILDDQVMKLGKKNQIVA---FANLAERCLDLNGK 339
K R Y ++ L KN++ F N + LDL K
Sbjct: 258 L-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDLLDK 292
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 107/242 (44%), Gaps = 47/242 (19%)
Query: 120 NEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRF 179
EI IL ++NH ++K+ + E +V E + G L+ + + +E T ++ F
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKE--ATCKLYF 120
Query: 180 RVAIEVAGALAYLHSGASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHV 236
++ A+ YLH I HRD+K N+LL +E K+ DFG SK + +T +
Sbjct: 121 ---YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSL 172
Query: 237 TTKIQGTFGYLDPEYHQS---SQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 293
+ GT YL PE S + D +S GV+L L+G P FS T VS
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP-FSEHRT---QVS- 227
Query: 294 AAYFVHSMRKNRLYHILDDQVMKLGKKNQIV-AFANLAERCLDL-------NGKKRPTME 345
L DQ+ GK N I +A ++E+ LDL + K R T E
Sbjct: 228 ----------------LKDQITS-GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE 270
Query: 346 EV 347
E
Sbjct: 271 EA 272
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 107/241 (44%), Gaps = 47/241 (19%)
Query: 121 EIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR 180
EI IL ++NH ++K+ + E +V E + G L+ + + +E T ++ F
Sbjct: 204 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKE--ATCKLYF- 259
Query: 181 VAIEVAGALAYLHSGASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVT 237
++ A+ YLH I HRD+K N+LL +E K+ DFG SK + +T +
Sbjct: 260 --YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLM 312
Query: 238 TKIQGTFGYLDPEYHQS---SQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
+ GT YL PE S + D +S GV+L L+G P FS T VSL
Sbjct: 313 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP-FSEHRT---QVSLK 368
Query: 295 AYFVHSMRKNRLYHILDDQVMKLGKKNQIV-AFANLAERCLDL-------NGKKRPTMEE 346
DQ+ GK N I +A ++E+ LDL + K R T EE
Sbjct: 369 -----------------DQITS-GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE 410
Query: 347 V 347
Sbjct: 411 A 411
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 107/242 (44%), Gaps = 47/242 (19%)
Query: 120 NEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRF 179
EI IL ++NH ++K+ + E +V E + G L+ + + +E T ++ F
Sbjct: 63 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKE--ATCKLYF 119
Query: 180 RVAIEVAGALAYLHSGASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHV 236
++ A+ YLH I HRD+K N+LL +E K+ DFG SK + +T +
Sbjct: 120 ---YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSL 171
Query: 237 TTKIQGTFGYLDPEYHQS---SQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 293
+ GT YL PE S + D +S GV+L L+G P FS T VS
Sbjct: 172 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP-FSEHRT---QVS- 226
Query: 294 AAYFVHSMRKNRLYHILDDQVMKLGKKNQIV-AFANLAERCLDL-------NGKKRPTME 345
L DQ+ GK N I +A ++E+ LDL + K R T E
Sbjct: 227 ----------------LKDQITS-GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE 269
Query: 346 EV 347
E
Sbjct: 270 EA 271
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 107/242 (44%), Gaps = 47/242 (19%)
Query: 120 NEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRF 179
EI IL ++NH ++K+ + E +V E + G L+ + + +E T ++ F
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKE--ATCKLYF 120
Query: 180 RVAIEVAGALAYLHSGASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHV 236
++ A+ YLH I HRD+K N+LL +E K+ DFG SK + +T +
Sbjct: 121 ---YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSL 172
Query: 237 TTKIQGTFGYLDPEYHQS---SQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 293
+ GT YL PE S + D +S GV+L L+G P FS T VS
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP-FSEHRT---QVS- 227
Query: 294 AAYFVHSMRKNRLYHILDDQVMKLGKKNQIV-AFANLAERCLDL-------NGKKRPTME 345
L DQ+ GK N I +A ++E+ LDL + K R T E
Sbjct: 228 ----------------LKDQITS-GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE 270
Query: 346 EV 347
E
Sbjct: 271 EA 272
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 126/276 (45%), Gaps = 29/276 (10%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL- 136
+G+G G V ++ +A+KK ++ + + Y + + EI IL + H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKK--ISPFEHQTY-CQRTLREIKILLRFRHENIIGIN 87
Query: 137 ---LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+E + + + + LY+ L +H + ++ + ++ L Y+H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF------LYQILRGLKYIH 141
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQGTFGYLDPEY 251
S + HRD+K +N+LL+ K+ DFG ++ D H T+ T Y PE
Sbjct: 142 SAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAAYFVHSMRKNRLYHIL 310
+S+ KS D++S G +L E+L+ +PIF G + ++ + S + L I+
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP-GKHYLDQLNHILGILGSPSQEDLNXII 256
Query: 311 D----DQVMKLGKKNQIVA---FANLAERCLDLNGK 339
+ + ++ L KN++ F N + LDL K
Sbjct: 257 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDK 292
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 124/292 (42%), Gaps = 53/292 (18%)
Query: 73 FNVNRILGQGGQGT-VYKGRLEDGRIIAVKK---SKLAVDDEELYKLEEFINEIFILSQI 128
F +LG G +GT VY+G D R +AVK+ + D E+ L E
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFADREVQLLRE---------SD 75
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDR---HQNEEYPLTWEMRFRVAIEV 185
H NV++ + +F + E TL +++ + H E P+T + +
Sbjct: 76 EHPNVIRYFCTEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGLE-PIT------LLQQT 127
Query: 186 AGALAYLHSGASSPIYHRDIKSTNILLD-----ERYRAKVADFGTSKFIAMDQTHVTTK- 239
LA+LHS I HRD+K NIL+ + +A ++DFG K +A+ + + +
Sbjct: 128 TSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRS 184
Query: 240 -IQGTFGYLDPEYHQSSQLTDKS---DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLAA 295
+ GT G++ PE + + D++S G V +++ F Q N+ L A
Sbjct: 185 GVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGA 244
Query: 296 YFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTMEEV 347
+ + +K++ V L E+ + ++ +KRP+ + V
Sbjct: 245 CSLDCLHP---------------EKHEDVIARELIEKMIAMDPQKRPSAKHV 281
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 49/286 (17%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL- 136
+G+G G V ++ +A+KK ++ + + Y + + EI IL + H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKK--ISPFEHQTY-CQRTLREIKILLRFRHENIIGIN 87
Query: 137 ---LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+E + + + + LY+ L +H + ++ + ++ L Y+H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF------LYQILRGLKYIH 141
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQGTFGYLDPEY 251
S + HRD+K +N+LL+ K+ DFG ++ D H T+ T Y PE
Sbjct: 142 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS--------------TGNTSQENVSLAAY 296
+S+ KS D++S G +L E+L+ +PIF G+ SQE+++
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 257
Query: 297 FVHSMRKNRLYHILDDQVMKLGKKNQIVA---FANLAERCLDLNGK 339
K R Y ++ L KN++ F N + LDL K
Sbjct: 258 L-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDLLDK 292
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 49/286 (17%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL- 136
+G+G G V ++ +A+KK ++ + + Y + + EI IL + H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKK--ISPFEHQTY-CQRTLREIKILLRFRHENIIGIN 89
Query: 137 ---LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+E + + + + LY+ L +H + ++ + ++ L Y+H
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF------LYQILRGLKYIH 143
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQGTFGYLDPEY 251
S + HRD+K +N+LL+ K+ DFG ++ D H T+ T Y PE
Sbjct: 144 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS--------------TGNTSQENVSLAAY 296
+S+ KS D++S G +L E+L+ +PIF G+ SQE+++
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 259
Query: 297 FVHSMRKNRLYHILDDQVMKLGKKNQIVA---FANLAERCLDLNGK 339
K R Y ++ L KN++ F N + LDL K
Sbjct: 260 L-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDLLDK 294
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 107/242 (44%), Gaps = 47/242 (19%)
Query: 120 NEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRF 179
EI IL ++NH ++K+ + E +V E + G L+ + + +E T ++ F
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKE--ATCKLYF 120
Query: 180 RVAIEVAGALAYLHSGASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHV 236
++ A+ YLH I HRD+K N+LL +E K+ DFG SK + +T +
Sbjct: 121 ---YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSL 172
Query: 237 TTKIQGTFGYLDPEYHQS---SQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 293
+ GT YL PE S + D +S GV+L L+G P FS T VS
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP-FSEHRT---QVS- 227
Query: 294 AAYFVHSMRKNRLYHILDDQVMKLGKKNQIV-AFANLAERCLDL-------NGKKRPTME 345
L DQ+ GK N I +A ++E+ LDL + K R T E
Sbjct: 228 ----------------LKDQITS-GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE 270
Query: 346 EV 347
E
Sbjct: 271 EA 272
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 107/241 (44%), Gaps = 47/241 (19%)
Query: 121 EIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR 180
EI IL ++NH ++K+ + E +V E + G L+ + + +E T ++ F
Sbjct: 190 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKE--ATCKLYF- 245
Query: 181 VAIEVAGALAYLHSGASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVT 237
++ A+ YLH I HRD+K N+LL +E K+ DFG SK + +T +
Sbjct: 246 --YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLM 298
Query: 238 TKIQGTFGYLDPEYHQS---SQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
+ GT YL PE S + D +S GV+L L+G P FS T VSL
Sbjct: 299 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP-FSEHRT---QVSLK 354
Query: 295 AYFVHSMRKNRLYHILDDQVMKLGKKNQIV-AFANLAERCLDL-------NGKKRPTMEE 346
DQ+ GK N I +A ++E+ LDL + K R T EE
Sbjct: 355 -----------------DQITS-GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE 396
Query: 347 V 347
Sbjct: 397 A 397
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 35/173 (20%)
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 241
++ L Y+HS + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 134 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 242 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS--------------TGNT 286
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 249
Query: 287 SQENVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVA---FANLAERCLDL 336
SQE+++ K R Y ++ L KN++ F N + LDL
Sbjct: 250 SQEDLNCGINL-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDL 291
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 107/242 (44%), Gaps = 47/242 (19%)
Query: 120 NEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRF 179
EI IL ++NH ++K+ + E +V E + G L+ + + +E T ++ F
Sbjct: 70 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKE--ATCKLYF 126
Query: 180 RVAIEVAGALAYLHSGASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHV 236
++ A+ YLH I HRD+K N+LL +E K+ DFG SK + +T +
Sbjct: 127 ---YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSL 178
Query: 237 TTKIQGTFGYLDPEYHQS---SQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQENVSL 293
+ GT YL PE S + D +S GV+L L+G P FS T VS
Sbjct: 179 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP-FSEHRT---QVS- 233
Query: 294 AAYFVHSMRKNRLYHILDDQVMKLGKKNQIV-AFANLAERCLDL-------NGKKRPTME 345
L DQ+ GK N I +A ++E+ LDL + K R T E
Sbjct: 234 ----------------LKDQITS-GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE 276
Query: 346 EV 347
E
Sbjct: 277 EA 278
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 124/283 (43%), Gaps = 49/283 (17%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL- 136
+G+G G V ++ +A+KK ++ + + Y + + EI IL + H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKK--ISPFEHQTY-CQRTLREIKILLRFRHENIIGIN 107
Query: 137 ---LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+E + + + + LY+ L +H + ++ + ++ L Y+H
Sbjct: 108 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF------LYQILRGLKYIH 161
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQGTFGYLDPEY 251
S + HRD+K +N+LL+ K+ DFG ++ D H T+ T Y PE
Sbjct: 162 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 218
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS--------------TGNTSQENVSLAAY 296
+S+ KS D++S G +L E+L+ +PIF G+ SQE+++
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 277
Query: 297 FVHSMRKNRLYHILDDQVMKLGKKNQIVA---FANLAERCLDL 336
K R Y ++ L KN++ F N + LDL
Sbjct: 278 L-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDL 309
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 123/283 (43%), Gaps = 49/283 (17%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL- 136
+G+G G V ++ +A+KK ++ + + Y + + EI IL + H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKK--ISPFEHQTY-CQRTLREIKILLRFRHENIIGIN 107
Query: 137 ---LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+E + + + LY+ L +H + ++ + ++ L Y+H
Sbjct: 108 DIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYF------LYQILRGLKYIH 161
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQGTFGYLDPEY 251
S + HRD+K +N+LL+ K+ DFG ++ D H T+ T Y PE
Sbjct: 162 SAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 218
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS--------------TGNTSQENVSLAAY 296
+S+ KS D++S G +L E+L+ +PIF G+ SQE+++
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 277
Query: 297 FVHSMRKNRLYHILDDQVMKLGKKNQIVA---FANLAERCLDL 336
K R Y ++ L KN++ F N + LDL
Sbjct: 278 L-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDL 309
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 49/286 (17%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL- 136
+G+G G V ++ +A+KK ++ + + Y + + EI IL + H N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKK--ISPFEHQTY-CQRTLREIKILLRFRHENIIGIN 95
Query: 137 ---LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+E + + + + LY+ L +H + ++ + ++ L Y+H
Sbjct: 96 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF------LYQILRGLKYIH 149
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQGTFGYLDPEY 251
S + HRD+K +N+LL+ K+ DFG ++ D H T+ T Y PE
Sbjct: 150 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 206
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS--------------TGNTSQENVSLAAY 296
+S+ KS D++S G +L E+L+ +PIF G+ SQE+++
Sbjct: 207 MLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 265
Query: 297 FVHSMRKNRLYHILDDQVMKLGKKNQIVA---FANLAERCLDLNGK 339
K R Y ++ L KN++ F N + LDL K
Sbjct: 266 L-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDLLDK 300
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 49/286 (17%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL- 136
+G+G G V ++ +A+KK ++ + + Y + + EI IL + H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKK--ISPFEHQTY-CQRTLREIKILLRFRHENIIGIN 87
Query: 137 ---LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+E + + + + LY+ L +H + ++ + ++ L Y+H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF------LYQILRGLKYIH 141
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQGTFGYLDPEY 251
S + HRD+K +N+LL+ K+ DFG ++ D H T+ T Y PE
Sbjct: 142 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS--------------TGNTSQENVSLAAY 296
+S+ KS D++S G +L E+L+ +PIF G+ SQE+++
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 257
Query: 297 FVHSMRKNRLYHILDDQVMKLGKKNQIVA---FANLAERCLDLNGK 339
K R Y ++ L KN++ F N + LDL K
Sbjct: 258 L-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDLLDK 292
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 49/286 (17%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL- 136
+G+G G V ++ +A+KK ++ + + Y + + EI IL + H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKK--ISPFEHQTY-CQRTLREIKILLRFRHENIIGIN 85
Query: 137 ---LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+E + + + + LY+ L +H + ++ + ++ L Y+H
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF------LYQILRGLKYIH 139
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQGTFGYLDPEY 251
S + HRD+K +N+LL+ K+ DFG ++ D H T+ T Y PE
Sbjct: 140 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS--------------TGNTSQENVSLAAY 296
+S+ KS D++S G +L E+L+ +PIF G+ SQE+++
Sbjct: 197 MLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 255
Query: 297 FVHSMRKNRLYHILDDQVMKLGKKNQIVA---FANLAERCLDLNGK 339
K R Y ++ L KN++ F N + LDL K
Sbjct: 256 L-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDLLDK 290
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 49/286 (17%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL- 136
+G+G G V ++ +A+KK ++ + + Y + + EI IL + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKK--ISPFEHQTYX-QRTLREIKILLRFRHENIIGIN 91
Query: 137 ---LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+E + + + + LY+ L +H + ++ + ++ L Y+H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF------LYQILRGLKYIH 145
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQGTFGYLDPEY 251
S + HRD+K +N+LL+ K+ DFG ++ D H T+ T Y PE
Sbjct: 146 SAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS--------------TGNTSQENVSLAAY 296
+S+ KS D++S G +L E+L+ +PIF G+ SQE+++
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261
Query: 297 FVHSMRKNRLYHILDDQVMKLGKKNQIVA---FANLAERCLDLNGK 339
K R Y ++ L KN++ F N + LDL K
Sbjct: 262 L-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDLLDK 296
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 78/177 (44%), Gaps = 24/177 (13%)
Query: 172 PLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAM 231
P+T E + +VA + +L +S HRD+ + NILL E K+ DFG ++ I
Sbjct: 195 PITMEDLISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYK 251
Query: 232 DQTHVTT-KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 290
+ +V + ++ PE + KSDV+S+GV+L E IFS G +
Sbjct: 252 NPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWE-------IFSLGGSPYPG 304
Query: 291 VSLAAYFVHSMRKN-----------RLYHILDDQVMKLGKKNQIVAFANLAERCLDL 336
V + F +R+ +Y I+ D + K+ FA L E+ DL
Sbjct: 305 VQMDEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERP--RFAELVEKLGDL 359
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Query: 61 FSSKELDKATNHFNVNRILGQGGQGTVYKG------RLEDGRIIAVKKSKLAVDDEELYK 114
+ + + + A + + LG+G G V + + R +AVK K E
Sbjct: 17 YDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKA 76
Query: 115 LEEFINEIFILSQINHR-NVVKLLGCCLETEFPLLV-YEFIPNGTLYQHLHDR 165
L + E+ IL+ I H NVV LLG C + PL+V E+ G L +L +
Sbjct: 77 L---MTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSK 126
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 49/286 (17%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL- 136
+G+G G V ++ +A+KK ++ + + Y + + EI IL + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKK--ISPFEHQTY-CQRTLREIKILLRFRHENIIGIN 91
Query: 137 ---LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+E + + + + LY+ L +H + ++ + ++ L Y+H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF------LYQILRGLKYIH 145
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQGTFGYLDPEY 251
S + HRD+K +N+LL+ K+ DFG ++ D H T+ T Y PE
Sbjct: 146 SAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS--------------TGNTSQENVSLAAY 296
+S+ KS D++S G +L E+L+ +PIF G+ SQE+++
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261
Query: 297 FVHSMRKNRLYHILDDQVMKLGKKNQIVA---FANLAERCLDLNGK 339
K R Y ++ L KN++ F N + LDL K
Sbjct: 262 L-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDLLDK 296
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 49/286 (17%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL- 136
+G+G G V ++ +A+KK ++ + + Y + + EI IL + H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKK--ISPFEHQTY-CQRTLREIKILLRFRHENIIGIN 87
Query: 137 ---LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+E + + + + LY+ L +H + ++ + ++ L Y+H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF------LYQILRGLKYIH 141
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQGTFGYLDPEY 251
S + HRD+K +N+LL+ K+ DFG ++ D H T+ T Y PE
Sbjct: 142 SAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS--------------TGNTSQENVSLAAY 296
+S+ KS D++S G +L E+L+ +PIF G+ SQE+++
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSPSQEDLNXIIN 257
Query: 297 FVHSMRKNRLYHILDDQVMKLGKKNQIVA---FANLAERCLDLNGK 339
K R Y ++ L KN++ F N + LDL K
Sbjct: 258 L-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDLLDK 292
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 87/198 (43%), Gaps = 19/198 (9%)
Query: 87 VYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLGCCLETEFP 146
V G+ +II KK L+ D + KLE E I + H N+V+L E
Sbjct: 44 VLAGQEYAAKIINTKK--LSARDHQ--KLE---REARICRLLKHPNIVRLHDSISEEGHH 96
Query: 147 LLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIK 206
L+++ + G L++ + R E + ++ A+ + H + HRD+K
Sbjct: 97 YLIFDLVTGGELFEDIVAREYYSEADAS-----HCIQQILEAVLHCHQMG---VVHRDLK 148
Query: 207 STNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 263
N+LL + + K+ADFG + + +Q GT GYL PE + D+
Sbjct: 149 PENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDL 207
Query: 264 YSFGVVLVELLTGKKPIF 281
++ GV+L LL G P +
Sbjct: 208 WACGVILYILLVGYPPFW 225
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 35/176 (19%)
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 241
++ L Y+HS + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 136 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 242 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS--------------TGNT 286
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 251
Query: 287 SQENVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVA---FANLAERCLDLNGK 339
SQE+++ K R Y ++ L KN++ F N + LDL K
Sbjct: 252 SQEDLNCIINL-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDLLDK 296
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 49/286 (17%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL- 136
+G+G G V ++ +A+KK ++ + + Y + + EI IL + H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKK--ISPFEHQTY-CQRTLREIKILLRFRHENIIGIN 92
Query: 137 ---LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+E + + + + LY+ L +H + ++ + ++ L Y+H
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF------LYQILRGLKYIH 146
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQGTFGYLDPEY 251
S + HRD+K +N+LL+ K+ DFG ++ D H T+ T Y PE
Sbjct: 147 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 203
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS--------------TGNTSQENVSLAAY 296
+S+ KS D++S G +L E+L+ +PIF G+ SQE+++
Sbjct: 204 MLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 262
Query: 297 FVHSMRKNRLYHILDDQVMKLGKKNQIVA---FANLAERCLDLNGK 339
K R Y ++ L KN++ F N + LDL K
Sbjct: 263 L-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDLLDK 297
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 49/286 (17%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL- 136
+G+G G V ++ +A+KK ++ + + Y + + EI IL + H N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKK--ISPFEHQTY-CQRTLREIKILLRFRHENIIGIN 93
Query: 137 ---LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+E + + + + LY+ L +H + ++ + ++ L Y+H
Sbjct: 94 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF------LYQILRGLKYIH 147
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQGTFGYLDPEY 251
S + HRD+K +N+LL+ K+ DFG ++ D H T+ T Y PE
Sbjct: 148 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 204
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS--------------TGNTSQENVSLAAY 296
+S+ KS D++S G +L E+L+ +PIF G+ SQE+++
Sbjct: 205 MLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 263
Query: 297 FVHSMRKNRLYHILDDQVMKLGKKNQIVA---FANLAERCLDLNGK 339
K R Y ++ L KN++ F N + LDL K
Sbjct: 264 L-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDLLDK 298
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 49/286 (17%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL- 136
+G+G G V ++ +A+KK ++ + + Y + + EI IL + H N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKK--ISPFEHQTY-CQRTLREIKILLRFRHENIIGIN 84
Query: 137 ---LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+E + + + + LY+ L +H + ++ + ++ L Y+H
Sbjct: 85 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF------LYQILRGLKYIH 138
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQGTFGYLDPEY 251
S + HRD+K +N+LL+ K+ DFG ++ D H T+ T Y PE
Sbjct: 139 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 195
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS--------------TGNTSQENVSLAAY 296
+S+ KS D++S G +L E+L+ +PIF G+ SQE+++
Sbjct: 196 MLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 254
Query: 297 FVHSMRKNRLYHILDDQVMKLGKKNQIVA---FANLAERCLDLNGK 339
K R Y ++ L KN++ F N + LDL K
Sbjct: 255 L-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDLLDK 289
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 49/286 (17%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL- 136
+G+G G V ++ +A+KK ++ + + Y + + EI IL + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKK--ISPFEHQTY-CQRTLREIKILLRFRHENIIGIN 91
Query: 137 ---LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+E + + + + LY+ L +H + ++ + ++ L Y+H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF------LYQILRGLKYIH 145
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQGTFGYLDPEY 251
S + HRD+K +N+LL+ K+ DFG ++ D H T+ T Y PE
Sbjct: 146 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS--------------TGNTSQENVSLAAY 296
+S+ KS D++S G +L E+L+ +PIF G+ SQE+++
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261
Query: 297 FVHSMRKNRLYHILDDQVMKLGKKNQIVA---FANLAERCLDLNGK 339
K R Y ++ L KN++ F N + LDL K
Sbjct: 262 L-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDLLDK 296
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 12/156 (7%)
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGAL 189
H N+VKL + LV E + G L++ + + E ++ MR ++ A+
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMR-----KLVSAV 119
Query: 190 AYLHSGASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
+++H + HRD+K N+L ++ K+ DFG ++ D + T T Y
Sbjct: 120 SHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC-FTLHY 175
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFS 282
PE + + D++S GV+L +L+G+ P S
Sbjct: 176 AAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQS 211
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 72 HFNVNRILGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLE---EFINEIFILSQ 127
H+ + LG G G V G+ E G +AVK ++ +++ L+ + EI L
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVK----ILNRQKIRSLDVVGKIRREIQNLKL 72
Query: 128 INHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
H +++KL +V E++ G L+ ++ + +E E R R+ ++
Sbjct: 73 FRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEK----ESR-RLFQQILS 127
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 247
+ Y H + HRD+K N+LLD AK+ADFG S M G+ Y
Sbjct: 128 GVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNM--MSDGEFLRXSCGSPNYA 182
Query: 248 DPEYHQSSQL--TDKSDVYSFGVVLVELLTGKKP 279
PE S +L + D++S GV+L LL G P
Sbjct: 183 APEV-ISGRLYAGPEVDIWSSGVILYALLCGTLP 215
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 241
++ L Y+HS + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 130 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 242 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS 282
T Y PE +S+ KS D++S G +L E+L+ +PIF
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFP 227
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 35/176 (19%)
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 241
++ L Y+HS + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 136 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 242 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS--------------TGNT 286
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 251
Query: 287 SQENVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVA---FANLAERCLDLNGK 339
SQE+++ K R Y ++ L KN++ F N + LDL K
Sbjct: 252 SQEDLNCIINL-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDLLDK 296
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 35/176 (19%)
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQ 241
++ L Y+HS + HRD+K +N+LL+ K+ DFG ++ D H T+
Sbjct: 134 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 242 GTFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS--------------TGNT 286
T Y PE +S+ KS D++S G +L E+L+ +PIF G+
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSP 249
Query: 287 SQENVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVA---FANLAERCLDLNGK 339
SQE+++ K R Y ++ L KN++ F N + LDL K
Sbjct: 250 SQEDLNCIINL-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDLLDK 294
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 126/303 (41%), Gaps = 62/303 (20%)
Query: 77 RILGQGGQGT-VYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVK 135
+ILG G GT V++G + GR +AVK+ + D L +++ + +H NV++
Sbjct: 21 KILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIK------LLTESDDHPNVIR 73
Query: 136 LLGCCLETEFPLLVYEFIPNGTLYQHLHDRH--------QNEEYPLTWEMRFRVAIEVAG 187
C T+ L + + N L + ++ Q E P++ + ++A
Sbjct: 74 YY-CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPIS------LLRQIAS 126
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLD-------------ERYRAKVADFGTSKFIAMDQT 234
+A+LHS I HRD+K NIL+ E R ++DFG K + Q
Sbjct: 127 GVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 183
Query: 235 HVTTKIQ---GTFGYLDPEYHQSS-------QLTDKSDVYSFGVVLVELLTGKKPIFSTG 284
+ GT G+ PE + S +LT D++S G V +L+ K F
Sbjct: 184 XFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 243
Query: 285 NTSQENVSLAAYFVHSMRKNRLYHILDDQVMKLGKKNQIVAFANLAERCLDLNGKKRPTM 344
+ + N+ + + D++ L ++ I +L + +D + KRPT
Sbjct: 244 YSRESNIIRGIFSL-------------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTA 290
Query: 345 EEV 347
+V
Sbjct: 291 MKV 293
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 115 LEEFINEIFILSQINHRNVVKLLGCCLET--EFPLLVYEFIPNGTLYQHLHDRHQNEEYP 172
+E+ EI IL +++H NVVKL+ + + +V+E + G + + + +E+
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED-- 137
Query: 173 LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMD 232
+ RF + G + YLH I HRDIK +N+L+ E K+ADFG S
Sbjct: 138 ---QARFYFQDLIKG-IEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGS 190
Query: 233 QTHVTTKIQGTFGYLDPEYHQSSQ--LTDKS-DVYSFGVVLVELLTGKKP 279
++ + GT ++ PE ++ + K+ DV++ GV L + G+ P
Sbjct: 191 DALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 20/238 (8%)
Query: 49 SYDGSVIDRCKLFSSKEL----DKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSK 104
+YD V D K + + + D +H++++ LG G G V+ R+ + +K
Sbjct: 25 NYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVH--RVTERATGNNFAAK 82
Query: 105 LAVDDEELYKLEEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHD 164
+ E K E EI +S + H +V L + +++YEF+ G L++ + D
Sbjct: 83 FVMTPHESDK-ETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD 141
Query: 165 RHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERY--RAKVAD 222
H ++ + +V L ++H H D+K NI+ + K+ D
Sbjct: 142 EHNK----MSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLID 194
Query: 223 FGTSKFIAMDQT-HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 279
FG + + Q+ VTT GT + PE + + +D++S GV+ LL+G P
Sbjct: 195 FGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 21/189 (11%)
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTW 175
EE E+ IL Q+ H NV+ L +L+ E + G L+ L + E T
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 176 EMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAM 231
++ ++ + YLH+ I H D+K NI+L ++ K+ DFG + I
Sbjct: 120 FIK-----QILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-- 169
Query: 232 DQTHVTTK-IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE- 289
+ V K I GT ++ PE L ++D++S GV+ LL+G P G+T QE
Sbjct: 170 -EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQET 226
Query: 290 --NVSLAAY 296
N++ +Y
Sbjct: 227 LANITAVSY 235
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 21/189 (11%)
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTW 175
EE E+ IL Q+ H NV+ L +L+ E + G L+ L + E T
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 176 EMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAM 231
++ ++ + YLH+ I H D+K NI+L ++ K+ DFG + I
Sbjct: 120 FIK-----QILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-- 169
Query: 232 DQTHVTTK-IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE- 289
+ V K I GT ++ PE L ++D++S GV+ LL+G P G+T QE
Sbjct: 170 -EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQET 226
Query: 290 --NVSLAAY 296
N++ +Y
Sbjct: 227 LANITAVSY 235
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 23/174 (13%)
Query: 121 EIFILSQIN-HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRF 179
E+ +L Q HRNV++L+ E + LV+E + G++ H+H R E +
Sbjct: 60 EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS----- 114
Query: 180 RVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYR---AKVADFGTSKFIAM--DQT 234
V +VA AL +LH+ I HRD+K NIL + + K+ DF I + D +
Sbjct: 115 VVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS 171
Query: 235 HVTTK----IQGTFGYLDPE----YHQSSQLTDK-SDVYSFGVVLVELLTGKKP 279
++T G+ Y+ PE + + + + DK D++S GV+L LL+G P
Sbjct: 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 29/229 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN 129
+ + + +G G G V R G+ +A+KK A D + + + E+ IL
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD--VVTNAKRTLRELKILKHFK 111
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNG---TLYQHL----HDRHQ--NEEYPLTWEMRFR 180
H N++ + T +P G ++Y L D HQ + PLT E
Sbjct: 112 HDNIIAIKDILRPT---------VPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRY 162
Query: 181 VAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVT 237
++ L Y+HS + HRD+K +N+L++E K+ DFG ++ + + +
Sbjct: 163 FLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM 219
Query: 238 TKIQGTFGYLDPEYHQS-SQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
T+ T Y PE S + T D++S G + E+L ++ +F N
Sbjct: 220 TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEML-ARRQLFPGKN 267
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 98/217 (45%), Gaps = 38/217 (17%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
+G+G G V++G + G +AVK + D++ ++ E N + + H N++ +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFS-SRDEKSWFRETELYNTVML----RHENILGFIA 69
Query: 139 CCLETEFP----LLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH- 193
+ + L+ + G+LY +L + L R+ + +A LA+LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL------RIVLSIASGLAHLHI 123
Query: 194 ----SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ-------G 242
+ I HRD+KS NIL+ + + +AD G +A+ + T ++ G
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLG----LAVMHSQSTNQLDVGNNPRVG 179
Query: 243 TFGYLDPEYHQSSQLTD------KSDVYSFGVVLVEL 273
T Y+ PE + D + D+++FG+VL E+
Sbjct: 180 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 12/160 (7%)
Query: 121 EIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR 180
EI L + H +++KL ++V E+ G L+ ++ ++ + +T + R
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKR-----MTEDEGRR 112
Query: 181 VAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKI 240
++ A+ Y H I HRD+K N+LLD+ K+ADFG S I D + T
Sbjct: 113 FFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSN-IMTDGNFLKTSC 168
Query: 241 QGTFGYLDPEYHQSSQLT-DKSDVYSFGVVLVELLTGKKP 279
G+ Y PE + DV+S G+VL +L G+ P
Sbjct: 169 -GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 36/225 (16%)
Query: 75 VNRILGQGG----QGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN- 129
+ +LG+G QG V L++G+ AVK ++ + + E+ L Q
Sbjct: 17 TSELLGEGAYAKVQGAV---SLQNGKEYAVK----IIEKQAGHSRSRVFREVETLYQCQG 69
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLH-DRHQNEEYPLTWEMRFRVAIEVAGA 188
++N+++L+ + LV+E + G++ H+ +H NE RV +VA A
Sbjct: 70 NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNER------EASRVVRDVAAA 123
Query: 189 LAYLHSGASSPIYHRDIKSTNILLDERYRA---KVADF--GTSKFIAMDQTHVTTK---- 239
L +LH+ I HRD+K NIL + + K+ DF G+ + T +TT
Sbjct: 124 LDFLHTKG---IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTT 180
Query: 240 IQGTFGYLDPEY-----HQSSQLTDKSDVYSFGVVLVELLTGKKP 279
G+ Y+ PE Q++ + D++S GVVL +L+G P
Sbjct: 181 PCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 20/238 (8%)
Query: 49 SYDGSVIDRCKLFSSKEL----DKATNHFNVNRILGQGGQGTVYKGRLEDGRIIAVKKSK 104
+YD V D K + + + D +H++++ LG G G V+ R+ + +K
Sbjct: 131 NYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVH--RVTERATGNNFAAK 188
Query: 105 LAVDDEELYKLEEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHD 164
+ E K E EI +S + H +V L + +++YEF+ G L++ + D
Sbjct: 189 FVMTPHESDK-ETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD 247
Query: 165 RHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERY--RAKVAD 222
H ++ + +V L ++H H D+K NI+ + K+ D
Sbjct: 248 EHNK----MSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLID 300
Query: 223 FGTSKFIAMDQT-HVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 279
FG + + Q+ VTT GT + PE + + +D++S GV+ LL+G P
Sbjct: 301 FGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 98/217 (45%), Gaps = 38/217 (17%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
+G+G G V++G + G +AVK + D++ ++ E N + + H N++ +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFS-SRDEKSWFRETELYNTVML----RHENILGFIA 69
Query: 139 CCLETEFP----LLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH- 193
+ + L+ + G+LY +L + L R+ + +A LA+LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL------RIVLSIASGLAHLHI 123
Query: 194 ----SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ-------G 242
+ I HRD+KS NIL+ + + +AD G +A+ + T ++ G
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLG----LAVMHSQSTNQLDVGNNPRVG 179
Query: 243 TFGYLDPEYHQSSQLTD------KSDVYSFGVVLVEL 273
T Y+ PE + D + D+++FG+VL E+
Sbjct: 180 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 98/217 (45%), Gaps = 38/217 (17%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
+G+G G V++G + G +AVK + D++ ++ E N + + H N++ +
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFS-SRDEKSWFRETELYNTVML----RHENILGFIA 98
Query: 139 CCLETEFP----LLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH- 193
+ + L+ + G+LY +L + L R+ + +A LA+LH
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL------RIVLSIASGLAHLHI 152
Query: 194 ----SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ-------G 242
+ I HRD+KS NIL+ + + +AD G +A+ + T ++ G
Sbjct: 153 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLG----LAVMHSQSTNQLDVGNNPRVG 208
Query: 243 TFGYLDPEYHQSSQLTD------KSDVYSFGVVLVEL 273
T Y+ PE + D + D+++FG+VL E+
Sbjct: 209 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 28/222 (12%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLE-DGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN 129
+ + + +G G G V R G+ +A+KK A D + + + E+ IL
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD--VVTNAKRTLRELKILKHFK 112
Query: 130 HRNVVKLLGCCLETEFPLLVYEFIPNG---TLYQHL----HDRHQ--NEEYPLTWEMRFR 180
H N++ + T +P G ++Y L D HQ + PLT E
Sbjct: 113 HDNIIAIKDILRPT---------VPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRY 163
Query: 181 VAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTHVT 237
++ L Y+HS + HRD+K +N+L++E K+ DFG ++ + + +
Sbjct: 164 FLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM 220
Query: 238 TKIQGTFGYLDPEYHQS-SQLTDKSDVYSFGVVLVELLTGKK 278
T+ T Y PE S + T D++S G + E+L ++
Sbjct: 221 TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 202 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQS-----SQ 256
HRDIK NIL+D ++ADFG+ + D T ++ GT Y+ PE Q+ +
Sbjct: 198 HRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGR 257
Query: 257 LTDKSDVYSFGVVLVELLTGKKPIFS 282
+ D +S GV + E+L G+ P ++
Sbjct: 258 YGPECDWWSLGVCMYEMLYGETPFYA 283
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTW 175
EE E+ IL Q+ H NV+ L +L+ E + G L+ L + E T
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 176 EMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAM 231
++ ++ + YLH+ I H D+K NI+L ++ K+ DFG + I
Sbjct: 120 FIK-----QILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-- 169
Query: 232 DQTHVTTK-IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 290
+ V K I GT ++ PE L ++D++S GV+ LL+G P G+T QE
Sbjct: 170 -EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQET 226
Query: 291 VS 292
++
Sbjct: 227 LA 228
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTW 175
EE E+ IL Q+ H NV+ L +L+ E + G L+ L + E T
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 176 EMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAM 231
++ ++ + YLH+ I H D+K NI+L ++ K+ DFG + I
Sbjct: 120 FIK-----QILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-- 169
Query: 232 DQTHVTTK-IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 290
+ V K I GT ++ PE L ++D++S GV+ LL+G P G+T QE
Sbjct: 170 -EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQET 226
Query: 291 VS 292
++
Sbjct: 227 LA 228
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 18/182 (9%)
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTW 175
EE E+ IL Q+ H NV+ L +L+ E + G L+ L + E T
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 176 EMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAM 231
++ ++ + YLH+ I H D+K NI+L ++ K+ DFG + I
Sbjct: 120 FIK-----QILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-- 169
Query: 232 DQTHVTTK-IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 290
+ V K I GT ++ PE L ++D++S GV+ LL+G P G+T QE
Sbjct: 170 -EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQET 226
Query: 291 VS 292
++
Sbjct: 227 LA 228
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 20/213 (9%)
Query: 72 HFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYKLEEFINEIFILSQ 127
++ + + LG+G G V G+ +A+K K LA D + ++E EI L
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQ-GRIER---EISYLRL 60
Query: 128 INHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
+ H +++KL + ++V E+ N L+ ++ R + E E R R ++
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQ----EAR-RFFQQIIS 114
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 247
A+ Y H I HRD+K N+LLDE K+ADFG S I D + T G+ Y
Sbjct: 115 AVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTSC-GSPNYA 169
Query: 248 DPEYHQSSQLT-DKSDVYSFGVVLVELLTGKKP 279
PE + DV+S GV+L +L + P
Sbjct: 170 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 20/213 (9%)
Query: 72 HFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYKLEEFINEIFILSQ 127
++ + + LG+G G V G+ +A+K K LA D + ++E EI L
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQ-GRIER---EISYLRL 69
Query: 128 INHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
+ H +++KL + ++V E+ N L+ ++ R + E E R R ++
Sbjct: 70 LRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQ----EAR-RFFQQIIS 123
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 247
A+ Y H I HRD+K N+LLDE K+ADFG S I D + T G+ Y
Sbjct: 124 AVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTSC-GSPNYA 178
Query: 248 DPEYHQSSQLT-DKSDVYSFGVVLVELLTGKKP 279
PE + DV+S GV+L +L + P
Sbjct: 179 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 20/213 (9%)
Query: 72 HFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYKLEEFINEIFILSQ 127
++ + + LG+G G V G+ +A+K K LA D + ++E EI L
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQ-GRIER---EISYLRL 70
Query: 128 INHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
+ H +++KL + ++V E+ N L+ ++ R + E E R R ++
Sbjct: 71 LRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQ----EAR-RFFQQIIS 124
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 247
A+ Y H I HRD+K N+LLDE K+ADFG S I D + T G+ Y
Sbjct: 125 AVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTSC-GSPNYA 179
Query: 248 DPEYHQSSQLT-DKSDVYSFGVVLVELLTGKKP 279
PE + DV+S GV+L +L + P
Sbjct: 180 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 109/236 (46%), Gaps = 31/236 (13%)
Query: 72 HFNVNRILGQGGQGTV--YKGRLEDGRIIAVKKSKL-AVDDEELYKLEEFINEIFILSQI 128
H+ + LG+GG V +G L DG A+K+ D E + E ++ +F
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLF----- 83
Query: 129 NHRNVVKLLGCCLETEFP----LLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIE 184
NH N+++L+ CL L+ F GTL+ + +R +++ LT + + +
Sbjct: 84 NHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEI-ERLKDKGNFLTEDQILWLLLG 142
Query: 185 VAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGT--SKFIAMDQTHVTTKIQG 242
+ L +H+ + HRD+K TNILL + + + D G+ I ++ + +Q
Sbjct: 143 ICRGLEAIHAKGYA---HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQD 199
Query: 243 ------TFGYLDPEYH--QSSQLTD-KSDVYSFGVVLVELLTGKKP---IFSTGNT 286
T Y PE QS + D ++DV+S G VL ++ G+ P +F G++
Sbjct: 200 WAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS 255
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 36/216 (16%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
+G+G G V++G+ G +AVK + EE E EI+ + H N++ +
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFRE--AEIYQTVMLRHENILGFIA 70
Query: 139 C-----CLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
T+ LV ++ +G+L+ +L+ Y +T E ++A+ A LA+LH
Sbjct: 71 ADNKDNGTWTQL-WLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAHLH 123
Query: 194 -----SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ-----GT 243
+ I HRD+KS NIL+ + +AD G + + D T I GT
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGT 181
Query: 244 FGYLDPEYHQSS------QLTDKSDVYSFGVVLVEL 273
Y+ PE S + ++D+Y+ G+V E+
Sbjct: 182 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 36/216 (16%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
+G+G G V++G+ G +AVK + EE E EI+ + H N++ +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFRE--AEIYQTVMLRHENILGFIA 64
Query: 139 C-----CLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
T+ LV ++ +G+L+ +L+ Y +T E ++A+ A LA+LH
Sbjct: 65 ADNKDNGTWTQL-WLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAHLH 117
Query: 194 -----SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ-----GT 243
+ I HRD+KS NIL+ + +AD G + + D T I GT
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGT 175
Query: 244 FGYLDPEYHQSS------QLTDKSDVYSFGVVLVEL 273
Y+ PE S + ++D+Y+ G+V E+
Sbjct: 176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 36/216 (16%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
+G+G G V++G+ G +AVK + EE E EI+ + H N++ +
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFRE--AEIYQTVMLRHENILGFIA 67
Query: 139 C-----CLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
T+ LV ++ +G+L+ +L+ Y +T E ++A+ A LA+LH
Sbjct: 68 ADNKDNGTWTQL-WLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAHLH 120
Query: 194 -----SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ-----GT 243
+ I HRD+KS NIL+ + +AD G + + D T I GT
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGT 178
Query: 244 FGYLDPEYHQSS------QLTDKSDVYSFGVVLVEL 273
Y+ PE S + ++D+Y+ G+V E+
Sbjct: 179 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 20/213 (9%)
Query: 72 HFNVNRILGQGGQGTVYKG-RLEDGRIIAVK---KSKLAVDDEELYKLEEFINEIFILSQ 127
++ + + LG+G G V G+ +A+K K LA D + ++E EI L
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQ-GRIER---EISYLRL 64
Query: 128 INHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
+ H +++KL + ++V E+ N L+ ++ R + E E R R ++
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQ----EAR-RFFQQIIS 118
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYL 247
A+ Y H I HRD+K N+LLDE K+ADFG S I D + T G+ Y
Sbjct: 119 AVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTSC-GSPNYA 173
Query: 248 DPEYHQSSQLT-DKSDVYSFGVVLVELLTGKKP 279
PE + DV+S GV+L +L + P
Sbjct: 174 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 36/216 (16%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
+G+G G V++G+ G +AVK + EE E EI+ + H N++ +
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFRE--AEIYQTVMLRHENILGFIA 65
Query: 139 C-----CLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
T+ LV ++ +G+L+ +L+ Y +T E ++A+ A LA+LH
Sbjct: 66 ADNKDNGTWTQL-WLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAHLH 118
Query: 194 -----SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ-----GT 243
+ I HRD+KS NIL+ + +AD G + + D T I GT
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGT 176
Query: 244 FGYLDPEYHQSS------QLTDKSDVYSFGVVLVEL 273
Y+ PE S + ++D+Y+ G+V E+
Sbjct: 177 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 21/189 (11%)
Query: 116 EEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTW 175
EE E+ IL Q+ H N++ L +L+ E + G L+ L + E T
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 176 EMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDER----YRAKVADFGTSKFIAM 231
++ ++ + YLH+ I H D+K NI+L ++ K+ DFG + I
Sbjct: 120 FIK-----QILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-- 169
Query: 232 DQTHVTTK-IQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQE- 289
+ V K I GT ++ PE L ++D++S GV+ LL+G P G+T QE
Sbjct: 170 -EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL--GDTKQET 226
Query: 290 --NVSLAAY 296
N++ +Y
Sbjct: 227 LANITAVSY 235
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 202 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQS-----SQ 256
HRDIK N+LLD ++ADFG+ + D T ++ GT Y+ PE Q+ +
Sbjct: 198 HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGK 257
Query: 257 LTDKSDVYSFGVVLVELLTGKKPIFS 282
+ D +S GV + E+L G+ P ++
Sbjct: 258 YGPECDWWSLGVCMYEMLYGETPFYA 283
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 36/216 (16%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
+G+G G V++G+ G +AVK + EE E EI+ + H N++ +
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFRE--AEIYQTVMLRHENILGFIA 103
Query: 139 C-----CLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
T+ LV ++ +G+L+ +L+ Y +T E ++A+ A LA+LH
Sbjct: 104 ADNKDNGTWTQL-WLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAHLH 156
Query: 194 -----SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ-----GT 243
+ I HRD+KS NIL+ + +AD G + + D T I GT
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGT 214
Query: 244 FGYLDPEYHQSS------QLTDKSDVYSFGVVLVEL 273
Y+ PE S + ++D+Y+ G+V E+
Sbjct: 215 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 36/216 (16%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
+G+G G V++G+ G +AVK + EE E EI+ + H N++ +
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFRE--AEIYQTVMLRHENILGFIA 90
Query: 139 C-----CLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
T+ LV ++ +G+L+ +L+ Y +T E ++A+ A LA+LH
Sbjct: 91 ADNKDNGTWTQL-WLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAHLH 143
Query: 194 -----SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQ-----GT 243
+ I HRD+KS NIL+ + +AD G + + D T I GT
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGT 201
Query: 244 FGYLDPEYHQSS------QLTDKSDVYSFGVVLVEL 273
Y+ PE S + ++D+Y+ G+V E+
Sbjct: 202 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 202 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQS-----SQ 256
HRDIK N+LLD ++ADFG+ + D T ++ GT Y+ PE Q+ +
Sbjct: 214 HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGK 273
Query: 257 LTDKSDVYSFGVVLVELLTGKKPIFS 282
+ D +S GV + E+L G+ P ++
Sbjct: 274 YGPECDWWSLGVCMYEMLYGETPFYA 299
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 124/286 (43%), Gaps = 49/286 (17%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL- 136
+G+G G V ++ +A+KK ++ + + Y + + EI IL + H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKK--ISPFEHQTY-CQRTLREIKILLRFRHENIIGIN 91
Query: 137 ---LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+E + + + + LY+ L +H + ++ + ++ L Y+H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF------LYQILRGLKYIH 145
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQGTFGYLDPEY 251
S + HRD+K +N+LL+ K+ DFG ++ D H + T Y PE
Sbjct: 146 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI 202
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS--------------TGNTSQENVSLAAY 296
+S+ KS D++S G +L E+L+ +PIF G+ SQE+++
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261
Query: 297 FVHSMRKNRLYHILDDQVMKLGKKNQIVA---FANLAERCLDLNGK 339
K R Y ++ L KN++ F N + LDL K
Sbjct: 262 L-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDLLDK 296
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 124/286 (43%), Gaps = 49/286 (17%)
Query: 79 LGQGGQGTVYKGRLEDGRI-IAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKL- 136
+G+G G V ++ +A+KK ++ + + Y + + EI IL + H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKK--ISPFEHQTY-CQRTLREIKILLRFRHENIIGIN 92
Query: 137 ---LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
+E + + + + LY+ L +H + ++ + ++ L Y+H
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF------LYQILRGLKYIH 146
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHV--TTKIQGTFGYLDPEY 251
S + HRD+K +N+LL+ K+ DFG ++ D H + T Y PE
Sbjct: 147 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI 203
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFS--------------TGNTSQENVSLAAY 296
+S+ KS D++S G +L E+L+ +PIF G+ SQE+++
Sbjct: 204 MLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 262
Query: 297 FVHSMRKNRLYHILDDQVMKLGKKNQIVA---FANLAERCLDLNGK 339
K R Y ++ L KN++ F N + LDL K
Sbjct: 263 L-----KARNY------LLSLPHKNKVPWNRLFPNADSKALDLLDK 297
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 83/202 (41%), Gaps = 25/202 (12%)
Query: 79 LGQGGQGTVYKGRL-EDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG G G V+K R EDGR+ AVK+S + + L+++ V
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRS--------MSPFRGPKDRARKLAEVGSHEKVGQH 116
Query: 138 GCCLETEFP------LLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAY 191
CC+ E L + + +L QH + W + ALA+
Sbjct: 117 PCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLL----ALAH 172
Query: 192 LHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY 251
LHS + H D+K NI L R R K+ DFG + + +G Y+ PE
Sbjct: 173 LHSQG---LVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMAPEL 227
Query: 252 HQSSQLTDKSDVYSFGVVLVEL 273
Q S T +DV+S G+ ++E+
Sbjct: 228 LQGSYGT-AADVFSLGLTILEV 248
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 73/162 (45%), Gaps = 13/162 (8%)
Query: 121 EIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR 180
EI + H N+V+ L ++ E+ G LY+ + + + E E RF
Sbjct: 66 EIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSED----EARFF 121
Query: 181 VAIEVAGALAYLHSGASSPIYHRDIKSTNILLD--ERYRAKVADFGTSKFIAMDQTHVTT 238
++G ++Y HS I HRD+K N LLD R K+ DFG SK + +T
Sbjct: 122 FQQLLSG-VSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST 177
Query: 239 KIQGTFGYLDPEYHQSSQLTDK-SDVYSFGVVLVELLTGKKP 279
GT Y+ PE + K +DV+S GV L +L G P
Sbjct: 178 V--GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYP 217
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 21/154 (13%)
Query: 146 PLLVYEFIPNG---TLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYH 202
P LV+E + N LYQ L D +++RF + E+ AL Y HS I H
Sbjct: 109 PALVFEHVNNTDFKQLYQTLTD----------YDIRFYM-YEILKALDYCHSMG---IMH 154
Query: 203 RDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 261
RD+K N+L+D +R ++ D+G ++F Q + ++ + + PE Q+ D S
Sbjct: 155 RDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYS 212
Query: 262 -DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
D++S G +L ++ K+P F + + V +A
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 38/226 (16%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEE--FINEIFILSQINHRNVVKL 136
+G+G TVYKG L+ + V +L D +L K E F E L + H N+V+
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCEL--QDRKLTKSERQRFKEEAEXLKGLQHPNIVRF 90
Query: 137 LGCCLET----EFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRV---------AI 183
T + +LV E +GTL +L RF+V
Sbjct: 91 YDSWESTVKGKKCIVLVTELXTSGTLKTYLK--------------RFKVXKIKVLRSWCR 136
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKIQG 242
++ L +LH+ + PI HRD+K NI + K+ D G + + + + G
Sbjct: 137 QILKGLQFLHT-RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA---TLKRASFAKAVIG 192
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQ 288
T + PE ++ + + DVY+FG +E T + P N +Q
Sbjct: 193 TPEFXAPEXYEE-KYDESVDVYAFGXCXLEXATSEYPYSECQNAAQ 237
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 23/170 (13%)
Query: 132 NVVKLLGCCLE--TEFPLLVYEFIPNG---TLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
N++KL+ + ++ P LV+E+I N LYQ L D +++RF + E+
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTD----------FDIRFYM-YELL 147
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG 245
AL Y HS I HRD+K N+++D ++ + ++ D+G ++F Q + ++ +
Sbjct: 148 KALDYCHSKG---IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEY-NVRVASRY- 202
Query: 246 YLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
+ PE Q+ D S D++S G +L ++ ++P F + + V +A
Sbjct: 203 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIA 252
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 21/154 (13%)
Query: 146 PLLVYEFIPNG---TLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYH 202
P LV+E + N LYQ L D +++RF + E+ AL Y HS I H
Sbjct: 109 PALVFEHVNNTDFKQLYQTLTD----------YDIRFYM-YEILKALDYCHSMG---IMH 154
Query: 203 RDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 261
RD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+ D S
Sbjct: 155 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYS 212
Query: 262 -DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
D++S G +L ++ K+P F + + V +A
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 23/170 (13%)
Query: 132 NVVKLLGCCLE--TEFPLLVYEFIPNG---TLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
N++KL+ + ++ P LV+E+I N LYQ L D +++RF + E+
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTD----------FDIRFYM-YELL 142
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKIQGTFG 245
AL Y HS I HRD+K N+++D ++ + ++ D+G ++F Q + ++ +
Sbjct: 143 KALDYCHSKG---IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEY-NVRVASRY- 197
Query: 246 YLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
+ PE Q+ D S D++S G +L ++ ++P F + + V +A
Sbjct: 198 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIA 247
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 17/185 (9%)
Query: 100 VKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLY 159
+ KL+ D + KLE E I + H N+V+L E L+++ + G L+
Sbjct: 44 INTKKLSARDHQ--KLE---REARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELF 98
Query: 160 QHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRA- 218
+ + R E + ++ A+ + H + HR++K N+LL + +
Sbjct: 99 EDIVAREYYSEADAS-----HCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGA 150
Query: 219 --KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTG 276
K+ADFG + + +Q GT GYL PE + D+++ GV+L LL G
Sbjct: 151 AVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
Query: 277 KKPIF 281
P +
Sbjct: 210 YPPFW 214
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 21/154 (13%)
Query: 146 PLLVYEFIPNG---TLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYH 202
P LV+E + N LYQ L D +++RF + E+ AL Y HS I H
Sbjct: 109 PALVFEHVNNTDFKQLYQTLTD----------YDIRFYM-YEILKALDYCHSMG---IMH 154
Query: 203 RDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 261
RD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+ D S
Sbjct: 155 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYS 212
Query: 262 -DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
D++S G +L ++ K+P F + + V +A
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 21/154 (13%)
Query: 146 PLLVYEFIPNG---TLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYH 202
P LV+E + N LYQ L D +++RF + E+ AL Y HS I H
Sbjct: 109 PALVFEHVNNTDFKQLYQTLTD----------YDIRFYM-YEILKALDYCHSMG---IMH 154
Query: 203 RDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 261
RD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+ D S
Sbjct: 155 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYS 212
Query: 262 -DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
D++S G +L ++ K+P F + + V +A
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 21/154 (13%)
Query: 146 PLLVYEFIPNG---TLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYH 202
P LV+E + N LYQ L D +++RF + E+ AL Y HS I H
Sbjct: 108 PALVFEHVNNTDFKQLYQTLTD----------YDIRFYM-YEILKALDYCHSMG---IMH 153
Query: 203 RDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 261
RD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+ D S
Sbjct: 154 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYS 211
Query: 262 -DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
D++S G +L ++ K+P F + + V +A
Sbjct: 212 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 245
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 21/154 (13%)
Query: 146 PLLVYEFIPNG---TLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYH 202
P LV+E + N LYQ L D +++RF + E+ AL Y HS I H
Sbjct: 109 PALVFEHVNNTDFKQLYQTLTD----------YDIRFYM-YEILKALDYCHSMG---IMH 154
Query: 203 RDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 261
RD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+ D S
Sbjct: 155 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYS 212
Query: 262 -DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
D++S G +L ++ K+P F + + V +A
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 21/154 (13%)
Query: 146 PLLVYEFIPNG---TLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYH 202
P LV+E + N LYQ L D +++RF + E+ AL Y HS I H
Sbjct: 108 PALVFEHVNNTDFKQLYQTLTD----------YDIRFYM-YEILKALDYCHSMG---IMH 153
Query: 203 RDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 261
RD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+ D S
Sbjct: 154 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYS 211
Query: 262 -DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
D++S G +L ++ K+P F + + V +A
Sbjct: 212 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 245
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 21/154 (13%)
Query: 146 PLLVYEFIPNG---TLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYH 202
P LV+E + N LYQ L D +++RF + E+ AL Y HS I H
Sbjct: 109 PALVFEHVNNTDFKQLYQTLTD----------YDIRFYM-YEILKALDYCHSMG---IMH 154
Query: 203 RDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 261
RD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+ D S
Sbjct: 155 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYS 212
Query: 262 -DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
D++S G +L ++ K+P F + + V +A
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 21/154 (13%)
Query: 146 PLLVYEFIPNG---TLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYH 202
P LV+E + N LYQ L D +++RF + E+ AL Y HS I H
Sbjct: 109 PALVFEHVNNTDFKQLYQTLTD----------YDIRFYM-YEILKALDYCHSMG---IMH 154
Query: 203 RDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 261
RD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+ D S
Sbjct: 155 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYS 212
Query: 262 -DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
D++S G +L ++ K+P F + + V +A
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 21/154 (13%)
Query: 146 PLLVYEFIPNG---TLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYH 202
P LV+E + N LYQ L D +++RF + E+ AL Y HS I H
Sbjct: 109 PALVFEHVNNTDFKQLYQTLTD----------YDIRFYM-YEILKALDYCHSMG---IMH 154
Query: 203 RDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 261
RD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+ D S
Sbjct: 155 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYS 212
Query: 262 -DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
D++S G +L ++ K+P F + + V +A
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 21/154 (13%)
Query: 146 PLLVYEFIPNG---TLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYH 202
P LV+E + N LYQ L D +++RF + E+ AL Y HS I H
Sbjct: 107 PALVFEHVNNTDFKQLYQTLTD----------YDIRFYM-YEILKALDYCHSMG---IMH 152
Query: 203 RDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 261
RD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+ D S
Sbjct: 153 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYS 210
Query: 262 -DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
D++S G +L ++ K+P F + + V +A
Sbjct: 211 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 244
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 96/225 (42%), Gaps = 24/225 (10%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG+G G V++ + K K+ D+ L K EI IL+ HRN++ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVK-----KEISILNIARHRNILHLH 67
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
E ++++EFI ++ +R + L +V AL +LHS
Sbjct: 68 ESFESMEELVMIFEFISGLDIF----ERINTSAFELNEREIVSYVHQVCEALQFLHS--- 120
Query: 198 SPIYHRDIKSTNILLDERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFG---YLDPEYH 252
I H DI+ NI+ R + K+ +FG ++ Q + F Y PE H
Sbjct: 121 HNIGHFDIRPENIIYQTRRSSTIKIIEFGQAR-----QLKPGDNFRLLFTAPEYYAPEVH 175
Query: 253 QSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTS-QENVSLAAY 296
Q ++ +D++S G ++ LL+G P + N EN+ A Y
Sbjct: 176 QHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEY 220
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 36/216 (16%)
Query: 79 LGQGGQGTVYKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLLG 138
+G+G G V+ G+ G +AVK + EE E EI+ + H N++ +
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVK---VFFTTEEASWFRE--TEIYQTVLMRHENILGFIA 98
Query: 139 CCLE-----TEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
++ T+ L+ ++ NG+LY +L + + L ++A L +LH
Sbjct: 99 ADIKGTGSWTQL-YLITDYHENGSLYDYLKSTTLDAKSML------KLAYSSVSGLCHLH 151
Query: 194 ----SGASSP-IYHRDIKSTNILLDERYRAKVADFGTS-KFIAMDQTHV----TTKIQGT 243
S P I HRD+KS NIL+ + +AD G + KFI+ D V T++ GT
Sbjct: 152 TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFIS-DTNEVDIPPNTRV-GT 209
Query: 244 FGYLDPEYHQSS------QLTDKSDVYSFGVVLVEL 273
Y+ PE S Q +D+YSFG++L E+
Sbjct: 210 KRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 21/154 (13%)
Query: 146 PLLVYEFIPNG---TLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYH 202
P LV+E + N LYQ L D +++RF + E+ AL Y HS I H
Sbjct: 109 PALVFEHVNNTDFKQLYQTLTD----------YDIRFYM-YEILKALDYCHSMG---IMH 154
Query: 203 RDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 261
RD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+ D S
Sbjct: 155 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYS 212
Query: 262 -DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
D++S G +L ++ K+P F + + V +A
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 21/154 (13%)
Query: 146 PLLVYEFIPNG---TLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYH 202
P LV+E + N LYQ L D +++RF + E+ AL Y HS I H
Sbjct: 109 PALVFEHVNNTDFKQLYQTLTD----------YDIRFYM-YEILKALDYCHSMG---IMH 154
Query: 203 RDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 261
RD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+ D S
Sbjct: 155 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYS 212
Query: 262 -DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
D++S G +L ++ K+P F + + V +A
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 21/154 (13%)
Query: 146 PLLVYEFIPNG---TLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYH 202
P LV+E + N LYQ L D +++RF + E+ AL Y HS I H
Sbjct: 114 PALVFEHVNNTDFKQLYQTLTD----------YDIRFYM-YEILKALDYCHSMG---IMH 159
Query: 203 RDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 261
RD+K N+++D +R ++ D+G ++F Q + ++ + + PE Q+ D S
Sbjct: 160 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYS 217
Query: 262 -DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
D++S G +L ++ K+P F + + V +A
Sbjct: 218 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 251
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 22/215 (10%)
Query: 71 NHFNVNRILGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFI--NEIFILSQ 127
+++++ LG G G V++ GR+ K Y L+++ NEI I++Q
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP------YPLDKYTVKNEISIMNQ 104
Query: 128 INHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
++H ++ L + +L+ EF+ G L+ DR E+Y ++ +
Sbjct: 105 LHHPKLINLHDAFEDKYEMVLILEFLSGGELF----DRIAAEDYKMSEAEVINYMRQACE 160
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLDERYRA--KVADFGTSKFIAMDQ-THVTTKIQGTF 244
L ++H + I H DIK NI+ + + + K+ DFG + + D+ VTT T
Sbjct: 161 GLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATA 214
Query: 245 GYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 279
+ PE + +D+++ GV+ LL+G P
Sbjct: 215 EFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSP 249
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 104/234 (44%), Gaps = 38/234 (16%)
Query: 73 FNVNRILGQGGQGTVYKGR-LEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQIN-H 130
V R+L +GG VY+ + + GR A+K+ L ++EE K I E+ + +++ H
Sbjct: 30 LRVRRVLAEGGFAFVYEAQDVGSGREYALKR--LLSNEEE--KNRAIIQEVCFMKKLSGH 85
Query: 131 RNVVKLLGCCL---------ETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRV 181
N+V+ + EF LL+ E G L + L + PL+ + ++
Sbjct: 86 PNIVQFCSAASIGKEESDTGQAEF-LLLTELC-KGQLVEFL--KKMESRGPLSCDTVLKI 141
Query: 182 AIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI------------ 229
+ A+ ++H PI HRD+K N+LL + K+ DFG++ I
Sbjct: 142 FYQTCRAVQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQR 200
Query: 230 -AMDQTHVTTKIQGTFGYLDPE---YHQSSQLTDKSDVYSFGVVLVELLTGKKP 279
A+ + +T T Y PE + + + +K D+++ G +L L + P
Sbjct: 201 RALVEEEITRNT--TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP 252
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 15/163 (9%)
Query: 121 EIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR 180
EI + H N+V+ L +V E+ G L++ + + + E E RF
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED----EARFF 120
Query: 181 VAIEVAGALAYLHSGASSPIYHRDIKSTNILLD--ERYRAKVADFGTSKFIAMDQTHVTT 238
++G ++Y H+ + HRD+K N LLD R K+ADFG SK + H
Sbjct: 121 FQQLISG-VSYAHAMQ---VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVL---HSQP 173
Query: 239 KIQ-GTFGYLDPEYHQSSQLTDK-SDVYSFGVVLVELLTGKKP 279
K GT Y+ PE + K +DV+S GV L +L G P
Sbjct: 174 KSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 14/170 (8%)
Query: 114 KLEEFIN-EIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYP 172
K++E + EI + H N+V+ L +V E+ G L++ + + + E
Sbjct: 56 KIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED- 114
Query: 173 LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD--ERYRAKVADFGTSKFIA 230
E RF ++G ++Y H+ + HRD+K N LLD R K+ DFG SK
Sbjct: 115 ---EARFFFQQLISG-VSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 167
Query: 231 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDK-SDVYSFGVVLVELLTGKKP 279
+ +T GT Y+ PE + K +DV+S GV L +L G P
Sbjct: 168 LHSQPKSTV--GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 215
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 13/162 (8%)
Query: 121 EIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFR 180
EI + H N+V+ L +V E+ G L++ + + + E E RF
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED----EARFF 120
Query: 181 VAIEVAGALAYLHSGASSPIYHRDIKSTNILLD--ERYRAKVADFGTSKFIAMDQTHVTT 238
++G ++Y H+ + HRD+K N LLD R K+ DFG SK + +T
Sbjct: 121 FQQLISG-VSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST 176
Query: 239 KIQGTFGYLDPEYHQSSQLTDK-SDVYSFGVVLVELLTGKKP 279
GT Y+ PE + K +DV+S GV L +L G P
Sbjct: 177 V--GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 18/107 (16%)
Query: 181 VAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTH----V 236
+ I++A A+ +LHS + HRD+K +NI KV DFG AMDQ V
Sbjct: 169 IFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGL--VTAMDQDEEEQTV 223
Query: 237 TTKIQ---------GTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELL 274
T + GT Y+ PE + + K D++S G++L ELL
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 77/151 (50%), Gaps = 15/151 (9%)
Query: 146 PLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDI 205
P LV+E + N T ++ L R +Y ++RF + E+ AL Y HS I HRD+
Sbjct: 109 PALVFEHV-NNTDFKQL--RQTLTDY----DIRFYM-YEILKALDYCHSMG---IMHRDV 157
Query: 206 KSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS-DV 263
K N+++D +R ++ D+G ++F Q + ++ + + PE Q+ D S D+
Sbjct: 158 KPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRY-FKGPELLVDYQMYDYSLDM 215
Query: 264 YSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
+S G +L ++ K+P F + + V +A
Sbjct: 216 WSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 11/139 (7%)
Query: 147 LLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIK 206
L+V E + G L+ + DR T + + A+ YLHS I HRD+K
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQA---FTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 188
Query: 207 STNIL-LDERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 263
N+L +R A K+ DFG +K +TT + Y+ PE + D+
Sbjct: 189 PENLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDM 246
Query: 264 YSFGVVLVELLTGKKPIFS 282
+S GV++ LL G P +S
Sbjct: 247 WSLGVIMYILLCGYPPFYS 265
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 11/139 (7%)
Query: 147 LLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIK 206
L+V E + G L+ + DR T + + A+ YLHS I HRD+K
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQA---FTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 144
Query: 207 STNIL-LDERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 263
N+L +R A K+ DFG +K +TT + Y+ PE + D+
Sbjct: 145 PENLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDM 202
Query: 264 YSFGVVLVELLTGKKPIFS 282
+S GV++ LL G P +S
Sbjct: 203 WSLGVIMYILLCGYPPFYS 221
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 11/139 (7%)
Query: 147 LLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIK 206
L+V E + G L+ + DR T + + A+ YLHS I HRD+K
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQA---FTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 194
Query: 207 STNIL-LDERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 263
N+L +R A K+ DFG +K +TT + Y+ PE + D+
Sbjct: 195 PENLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDM 252
Query: 264 YSFGVVLVELLTGKKPIFS 282
+S GV++ LL G P +S
Sbjct: 253 WSLGVIMYILLCGYPPFYS 271
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 11/139 (7%)
Query: 147 LLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIK 206
L+V E + G L+ + DR T + + A+ YLHS I HRD+K
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQA---FTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 158
Query: 207 STNIL-LDERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 263
N+L +R A K+ DFG +K +TT + Y+ PE + D+
Sbjct: 159 PENLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDM 216
Query: 264 YSFGVVLVELLTGKKPIFS 282
+S GV++ LL G P +S
Sbjct: 217 WSLGVIMYILLCGYPPFYS 235
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 202 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQS------- 254
HRDIK NILLD ++ADFG+ + D T + GT YL PE Q+
Sbjct: 185 HRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGT 244
Query: 255 SQLTDKSDVYSFGVVLVELLTGKKPIFS 282
+ D ++ GV E+ G+ P ++
Sbjct: 245 GSYGPECDWWALGVFAYEMFYGQTPFYA 272
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 11/139 (7%)
Query: 147 LLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIK 206
L+V E + G L+ + DR T + + A+ YLHS I HRD+K
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQA---FTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 143
Query: 207 STNIL-LDERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 263
N+L +R A K+ DFG +K +TT + Y+ PE + D+
Sbjct: 144 PENLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDM 201
Query: 264 YSFGVVLVELLTGKKPIFS 282
+S GV++ LL G P +S
Sbjct: 202 WSLGVIMYILLCGYPPFYS 220
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 11/139 (7%)
Query: 147 LLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIK 206
L+V E + G L+ + DR T + + A+ YLHS I HRD+K
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQA---FTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 142
Query: 207 STNIL-LDERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 263
N+L +R A K+ DFG +K +TT + Y+ PE + D+
Sbjct: 143 PENLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDM 200
Query: 264 YSFGVVLVELLTGKKPIFS 282
+S GV++ LL G P +S
Sbjct: 201 WSLGVIMYILLCGYPPFYS 219
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 11/139 (7%)
Query: 147 LLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIK 206
L+V E + G L+ + DR T + + A+ YLHS I HRD+K
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQA---FTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 150
Query: 207 STNIL-LDERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 263
N+L +R A K+ DFG +K +TT + Y+ PE + D+
Sbjct: 151 PENLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDM 208
Query: 264 YSFGVVLVELLTGKKPIFS 282
+S GV++ LL G P +S
Sbjct: 209 WSLGVIMYILLCGYPPFYS 227
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 11/139 (7%)
Query: 147 LLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIK 206
L+V E + G L+ + DR T + + A+ YLHS I HRD+K
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQA---FTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 149
Query: 207 STNIL-LDERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 263
N+L +R A K+ DFG +K +TT + Y+ PE + D+
Sbjct: 150 PENLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDM 207
Query: 264 YSFGVVLVELLTGKKPIFS 282
+S GV++ LL G P +S
Sbjct: 208 WSLGVIMYILLCGYPPFYS 226
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 11/139 (7%)
Query: 147 LLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIK 206
L+V E + G L+ + DR T + + A+ YLHS I HRD+K
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQA---FTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 144
Query: 207 STNIL-LDERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 263
N+L +R A K+ DFG +K +TT + Y+ PE + D+
Sbjct: 145 PENLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDM 202
Query: 264 YSFGVVLVELLTGKKPIFS 282
+S GV++ LL G P +S
Sbjct: 203 WSLGVIMYILLCGYPPFYS 221
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 11/139 (7%)
Query: 147 LLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIK 206
L+V E + G L+ + DR T + + A+ YLHS I HRD+K
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQA---FTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 148
Query: 207 STNIL-LDERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 263
N+L +R A K+ DFG +K +TT + Y+ PE + D+
Sbjct: 149 PENLLYTSKRPNAILKLTDFGFAKETT-SHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDM 206
Query: 264 YSFGVVLVELLTGKKPIFS 282
+S GV++ LL G P +S
Sbjct: 207 WSLGVIMYILLCGYPPFYS 225
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 200 IYHRDIKSTNILLDERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
I H D+K NILL ++ R+ KV DFG+S + + V T IQ F Y PE ++
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCY---EHQRVYTXIQSRF-YRAPEVILGARY 276
Query: 258 TDKSDVYSFGVVLVELLTG 276
D++S G +L ELLTG
Sbjct: 277 GMPIDMWSLGCILAELLTG 295
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 23/206 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V G +A+KK E K E+ +L + H NV+ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAK--RAYRELLLLKHMQHENVIGLL 107
Query: 138 GCCLETEFPLLVYEF---IP-NGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
Y+F +P T Q + +EE ++++ V + G L Y+H
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEE-----KIQYLVYQMLKG-LKYIH 161
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQGTFGYLDPEYH 252
S + HRD+K N+ ++E K+ DFG ++ + T +V T+ Y PE
Sbjct: 162 SAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVI 213
Query: 253 QSSQLTDKS-DVYSFGVVLVELLTGK 277
S +++ D++S G ++ E+LTGK
Sbjct: 214 LSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 200 IYHRDIKSTNILLDERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
I H D+K NILL ++ R+ KV DFG+S + + V T IQ F Y PE ++
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCY---EHQRVYTXIQSRF-YRAPEVILGARY 276
Query: 258 TDKSDVYSFGVVLVELLTG 276
D++S G +L ELLTG
Sbjct: 277 GMPIDMWSLGCILAELLTG 295
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%)
Query: 202 HRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKS 261
HRD+K NIL+ A + DFG + ++ GT Y PE S T ++
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 262 DVYSFGVVLVELLTGKKP 279
D+Y+ VL E LTG P
Sbjct: 217 DIYALTCVLYECLTGSPP 234
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 20/216 (9%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
P E + L HL N + LT + + ++ L Y+HS
Sbjct: 95 DVFT----PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQGTFGYLDPEYHQ 253
I HRD+K +N+ ++E K+ DFG ++ A + T +V T+ Y PE
Sbjct: 151 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIML 202
Query: 254 SSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 238
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
+ P E + L HL N + LT + + ++ L Y+HS
Sbjct: 95 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQGTFGYLDPEYHQ 253
I HRD+K +N+ ++E K+ DFG ++ A + T +V T+ Y PE
Sbjct: 151 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIML 202
Query: 254 SSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 238
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
+ P E + L HL N + LT + + ++ L Y+HS
Sbjct: 95 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQGTFGYLDPEYHQ 253
I HRD+K +N+ ++E K+ DFG ++ A + T +V T+ Y PE
Sbjct: 151 AD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIML 202
Query: 254 SSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 238
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 30/234 (12%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKG--RLEDGRI-IAVKKSKLAVDDEELYKLEEFIN 120
K +K + + ++ ++G+G G V K R+E + I + K+K A L +
Sbjct: 47 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAF-------LNQAQI 99
Query: 121 EIFILSQIN-HRNVVKLLGCCLETEFPL-----LVYEFIPNGTLYQHLHDRHQNEEY-PL 173
E+ +L +N H +K L+ F LV+E L +L+D +N + +
Sbjct: 100 EVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEM-----LSYNLYDLLRNTNFRGV 154
Query: 174 TWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILL--DERYRAKVADFGTSKFIAM 231
+ + + A ++ AL +L + S I H D+K NILL +R K+ DFG+S +
Sbjct: 155 SLNLTRKFAQQMCTALLFLATPELS-IIHCDLKPENILLCNPKRXAIKIVDFGSSCQLG- 212
Query: 232 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
+ IQ F Y PE D++S G +LVE+ TG +P+FS N
Sbjct: 213 --QRIYQXIQSRF-YRSPEVLLGMPYDLAIDMWSLGCILVEMHTG-EPLFSGAN 262
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 14/170 (8%)
Query: 114 KLEEFIN-EIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYP 172
K++E + EI + H N+V+ L +V E+ G L++ + + + E
Sbjct: 57 KIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED- 115
Query: 173 LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD--ERYRAKVADFGTSKFIA 230
E RF ++G ++Y H+ + HRD+K N LLD R K+ FG SK
Sbjct: 116 ---EARFFFQQLISG-VSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSV 168
Query: 231 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDK-SDVYSFGVVLVELLTGKKP 279
+ +T GT Y+ PE + K +DV+S GV L +L G P
Sbjct: 169 LHSQPKSTV--GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 19/187 (10%)
Query: 121 EIFILSQINHRNVVKLLGCCL--ETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMR 178
EI +L ++ H+NV++L+ E + +V E+ G Q + D + +P+
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGM--QEMLDSVPEKRFPVCQAHG 113
Query: 179 FRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFI---AMDQTH 235
+ ++ L YLHS I H+DIK N+LL K++ G ++ + A D T
Sbjct: 114 Y--FCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTC 168
Query: 236 VTTKIQGTFGYLDPEYHQSSQLTD--KSDVYSFGVVLVELLTGKKPIFSTGNTSQ--ENV 291
T+ QG+ + PE K D++S GV L + TG P F N + EN+
Sbjct: 169 RTS--QGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP-FEGDNIYKLFENI 225
Query: 292 SLAAYFV 298
+Y +
Sbjct: 226 GKGSYAI 232
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 23/206 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V G +A+KK E K E+ +L + H NV+ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAK--RAYRELLLLKHMQHENVIGLL 89
Query: 138 GCCLETEFPLLVYEF---IP-NGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLH 193
Y+F +P T Q + +EE ++++ V + G L Y+H
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEE-----KIQYLVYQMLKG-LKYIH 143
Query: 194 SGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQT-HVTTKIQGTFGYLDPEYH 252
S + HRD+K N+ ++E K+ DFG ++ + T +V T+ Y PE
Sbjct: 144 SAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVI 195
Query: 253 QSSQLTDKS-DVYSFGVVLVELLTGK 277
S +++ D++S G ++ E+LTGK
Sbjct: 196 LSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
Query: 179 FRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYR---AKVADFGTSKFIAMDQTH 235
R+ ++ + YLH I H D+K NILL Y K+ DFG S+ I H
Sbjct: 134 IRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG----H 186
Query: 236 VTT--KIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
+I GT YL PE +T +D+++ G++ LLT P N
Sbjct: 187 ACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN 238
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 30/234 (12%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKG--RLEDGRI-IAVKKSKLAVDDEELYKLEEFIN 120
K +K + + ++ ++G+G G V K R+E + I + K+K A L +
Sbjct: 47 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAF-------LNQAQI 99
Query: 121 EIFILSQIN-HRNVVKLLGCCLETEFPL-----LVYEFIPNGTLYQHLHDRHQNEEY-PL 173
E+ +L +N H +K L+ F LV+E L +L+D +N + +
Sbjct: 100 EVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEM-----LSYNLYDLLRNTNFRGV 154
Query: 174 TWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILL--DERYRAKVADFGTSKFIAM 231
+ + + A ++ AL +L + S I H D+K NILL +R K+ DFG+S +
Sbjct: 155 SLNLTRKFAQQMCTALLFLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG- 212
Query: 232 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
+ IQ F Y PE D++S G +LVE+ TG +P+FS N
Sbjct: 213 --QRIYQXIQSRF-YRSPEVLLGMPYDLAIDMWSLGCILVEMHTG-EPLFSGAN 262
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 36/215 (16%)
Query: 77 RILGQGGQGTV---YKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNV 133
R +G G G+V Y RL +AVKK L+ + L E+ +L + H NV
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQK--VAVKK--LSRPFQSLIHARRTYRELRLLKHLKHENV 81
Query: 134 VKLL-----GCCLE--TEFPL---LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAI 183
+ LL +E +E L L+ + N Q L D H ++F V
Sbjct: 82 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEH----------VQFLV-Y 130
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 243
++ L Y+HS I HRD+K +N+ ++E ++ DFG +A T T
Sbjct: 131 QLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFG----LARQADEEMTGYVAT 183
Query: 244 FGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 277
Y PE + +++ D++S G ++ ELL GK
Sbjct: 184 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 30/234 (12%)
Query: 64 KELDKATNHFNVNRILGQGGQGTVYKG--RLEDGRI-IAVKKSKLAVDDEELYKLEEFIN 120
K +K + + ++ ++G+G G V K R+E + I + K+K A L +
Sbjct: 28 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAF-------LNQAQI 80
Query: 121 EIFILSQIN-HRNVVKLLGCCLETEFPL-----LVYEFIPNGTLYQHLHDRHQNEEY-PL 173
E+ +L +N H +K L+ F LV+E L +L+D +N + +
Sbjct: 81 EVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEM-----LSYNLYDLLRNTNFRGV 135
Query: 174 TWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILL--DERYRAKVADFGTSKFIAM 231
+ + + A ++ AL +L + S I H D+K NILL +R K+ DFG+S +
Sbjct: 136 SLNLTRKFAQQMCTALLFLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 194
Query: 232 DQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGN 285
+ IQ F Y PE D++S G +LVE+ TG +P+FS N
Sbjct: 195 ---RIYQXIQSRF-YRSPEVLLGMPYDLAIDMWSLGCILVEMHTG-EPLFSGAN 243
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 77 RILGQGGQGTVYKGRLED-GRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVK 135
+ LG GG G V+ D + +A+KK + + D + ++ + EI I+ +++H N+VK
Sbjct: 17 KPLGCGGNGLVFSAVDNDCDKRVAIKK--IVLTDPQ--SVKHALREIKIIRRLDHDNIVK 72
Query: 136 L--------------LGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRV 181
+ +G E +V E++ + E+ PL E
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDL-------ANVLEQGPLLEEHARLF 125
Query: 182 AIEVAGALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTHVTTKI 240
++ L Y+HS + HRD+K N+ ++ E K+ DFG ++ + +H
Sbjct: 126 MYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLS 182
Query: 241 QG--TFGYLDPEYHQS-SQLTDKSDVYSFGVVLVELLTGK 277
+G T Y P S + T D+++ G + E+LTGK
Sbjct: 183 EGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 11/139 (7%)
Query: 147 LLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIK 206
L+V E + G L+ + DR T + + A+ YLHS I HRD+K
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQA---FTEREASEIMKSIGEAIQYLHSIN---IAHRDVK 142
Query: 207 STNIL-LDERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 263
N+L +R A K+ DFG +K + T+ T Y+ PE + D+
Sbjct: 143 PENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTEPCYTPYYVAPEVLGPEKYDKSCDM 200
Query: 264 YSFGVVLVELLTGKKPIFS 282
+S GV++ LL G P +S
Sbjct: 201 WSLGVIMYILLCGYPPFYS 219
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 95/215 (44%), Gaps = 36/215 (16%)
Query: 77 RILGQGGQGTV---YKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNV 133
R +G G G+V Y RL + +AVKK L+ + L E+ +L + H NV
Sbjct: 34 RPVGSGAYGSVCSAYDARLR--QKVAVKK--LSRPFQSLIHARRTYRELRLLKHLKHENV 89
Query: 134 VKLL-----GCCLE--TEFPL---LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAI 183
+ LL +E +E L L+ + N Q L D H ++F V
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEH----------VQFLV-Y 138
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 243
++ L Y+HS I HRD+K +N+ ++E ++ DFG +A T T
Sbjct: 139 QLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFG----LARQADEEMTGYVAT 191
Query: 244 FGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 277
Y PE + +++ D++S G ++ ELL GK
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 12/217 (5%)
Query: 73 FNVNRILGQGGQGTVYKG-RLEDGRIIAVKKSKLA-VDDEELYKLEEFINEIFILSQINH 130
+ + ++G+G V + E G+ AVK +A E+ E I + H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 131 RNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALA 190
++V+LL +V+EF+ L + R + + + + ++ AL
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKR-ADAGFVYSEAVASHYMRQILEALR 144
Query: 191 YLHSGASSPIYHRDIKSTNILLDERYRA---KVADFGTSKFIAMDQTHVTTKIQ-GTFGY 246
Y H I HRD+K N+LL + + K+ DFG + I + ++ + + GT +
Sbjct: 145 YCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVAGGRVGTPHF 199
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFST 283
+ PE + DV+ GV+L LL+G P + T
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT 236
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
P E + L HL N + LT + + ++ L Y+HS
Sbjct: 88 DVFT----PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 193
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
++ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 194 MLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 36/215 (16%)
Query: 77 RILGQGGQGTV---YKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNV 133
R +G G G+V Y RL +AVKK L+ + L E+ +L + H NV
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQK--VAVKK--LSRPFQSLIHARRTYRELRLLKHLKHENV 89
Query: 134 VKLL-----GCCLE--TEFPL---LVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAI 183
+ LL +E +E L L+ + N Q L D H ++F V
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEH----------VQFLV-Y 138
Query: 184 EVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGT 243
++ L Y+HS I HRD+K +N+ ++E ++ DFG +A T T
Sbjct: 139 QLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFG----LARQADEEMTGYVAT 191
Query: 244 FGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGK 277
Y PE + +++ D++S G ++ ELL GK
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 28/217 (12%)
Query: 72 HFNVNRI-LGQGGQGTVYKGRLED---GRIIAVKKSKLAVDDEELYKLEEFINEIFILSQ 127
H+ +++ LG+G G V+ R+ED G AVKK +L E+++ EE + +
Sbjct: 93 HWATHQLRLGRGSFGEVH--RMEDKQTGFQCAVKKVRL-----EVFRAEELM----ACAG 141
Query: 128 INHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
+ +V L G E + + E + G+L Q + E+ L + +
Sbjct: 142 LTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV-----KEQGCLPEDRALYYLGQALE 196
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMD---QTHVTTK-IQG 242
L YLHS I H D+K+ N+LL + A + DFG + + D ++ +T I G
Sbjct: 197 GLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPG 253
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 279
T ++ PE K DV+S +++ +L G P
Sbjct: 254 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
P E + L HL N + LT + + ++ L Y+HS
Sbjct: 88 DVFT----PARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 193
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 18/219 (8%)
Query: 77 RILGQGGQGTV---YKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNV 133
+ +G G QG V Y LE R +A+KK ++ K E+ ++ +NH+N+
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKVVNHKNI 85
Query: 134 VKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNE--EYPLTWEMRFRVAIEVAGALAY 191
+ LL P E + + L D + ++ + L E + ++ + +
Sbjct: 86 IGLLNVFT----PQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKH 141
Query: 192 LHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY 251
LHS I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEV 196
Query: 252 HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 290
+ D++S GV++ E++ G T + Q N
Sbjct: 197 ILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWN 235
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
+ P E + L HL N + LT + + ++ L Y+HS
Sbjct: 84 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHS 139
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 140 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 189
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 227
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 14/145 (9%)
Query: 147 LLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIK 206
L++ E + G L+ + +R T + ++ A+ +LHS I HRD+K
Sbjct: 102 LIIMECMEGGELFSRIQERGDQA---FTEREAAEIMRDIGTAIQFLHSHN---IAHRDVK 155
Query: 207 STNILLDERYR---AKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 263
N+L + + K+ DFG +K Q + T + Y+ PE + D+
Sbjct: 156 PENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCYTPY-YVAPEVLGPEKYDKSCDM 212
Query: 264 YSFGVVLVELLTGKKPIFSTGNTSQ 288
+S GV++ LL G P +S NT Q
Sbjct: 213 WSLGVIMYILLCGFPPFYS--NTGQ 235
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
+ P E + L HL N + LT + + ++ L Y+HS
Sbjct: 84 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 139
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 140 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRAPEI 189
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 227
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
P E + L HL N + LT + + ++ L Y+HS
Sbjct: 88 DVFT----PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRAPEI 193
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 14/170 (8%)
Query: 114 KLEEFIN-EIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYP 172
K++E + EI + H N+V+ L +V E+ G L++ + + + E
Sbjct: 57 KIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED- 115
Query: 173 LTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLD--ERYRAKVADFGTSKFIA 230
E RF ++G ++Y H+ + HRD+K N LLD R K+ FG SK
Sbjct: 116 ---EARFFFQQLISG-VSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSV 168
Query: 231 MDQTHVTTKIQGTFGYLDPEYHQSSQLTDK-SDVYSFGVVLVELLTGKKP 279
+ T GT Y+ PE + K +DV+S GV L +L G P
Sbjct: 169 LHSQPKDTV--GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 20/211 (9%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
LG+G G VYK +A+K+ +L ++E + I E+ +L ++ HRN+++L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA--IREVSLLKELQHRNIIELK 99
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGAS 197
L++E+ N ++ ++ ++ + ++ + + HS
Sbjct: 100 SVIHHNHRLHLIFEYAENDL------KKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRC 153
Query: 198 SPIYHRDIKSTNILL-----DERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYH 252
HRD+K N+LL E K+ DFG ++ + T +I T Y PE
Sbjct: 154 ---LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TLWYRPPEIL 209
Query: 253 QSSQLTDKS-DVYSFGVVLVELLTGKKPIFS 282
S+ S D++S + E+L K P+F
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEMLM-KTPLFP 239
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 18/219 (8%)
Query: 77 RILGQGGQGTV---YKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNV 133
+ +G G QG V Y LE R +A+KK ++ K E+ ++ +NH+N+
Sbjct: 30 KPIGSGAQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKVVNHKNI 85
Query: 134 VKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNE--EYPLTWEMRFRVAIEVAGALAY 191
+ LL P E + + L D + ++ + L E + ++ + +
Sbjct: 86 IGLLNVFT----PQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKH 141
Query: 192 LHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY 251
LHS I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEV 196
Query: 252 HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 290
+ D++S GV++ E++ G T + Q N
Sbjct: 197 ILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWN 235
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
P E + L HL N + LT + + ++ L Y+HS
Sbjct: 88 DVFT----PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRAPEI 193
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 23/170 (13%)
Query: 132 NVVKLLGCCLE--TEFPLLVYEFIPNG---TLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
N+VKLL + ++ P L++E++ N LY L D +++R+ + E+
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTD----------YDIRYYI-YELL 135
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFG 245
AL Y HS I HRD+K N+++D R ++ D+G ++F + + ++ +
Sbjct: 136 KALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-NVRVASRY- 190
Query: 246 YLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
+ PE Q D S D++S G + ++ K+P F + + V +A
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 60/139 (43%), Gaps = 11/139 (7%)
Query: 147 LLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIK 206
L+V E + G L+ + DR T + + A+ YLHS I HRD+K
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQA---FTEREASEIXKSIGEAIQYLHSIN---IAHRDVK 188
Query: 207 STNIL-LDERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 263
N+L +R A K+ DFG +K +TT + Y+ PE + D
Sbjct: 189 PENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDX 246
Query: 264 YSFGVVLVELLTGKKPIFS 282
+S GV+ LL G P +S
Sbjct: 247 WSLGVIXYILLCGYPPFYS 265
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 23/170 (13%)
Query: 132 NVVKLLGCCLE--TEFPLLVYEFIPNG---TLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
N+VKLL + ++ P L++E++ N LY L D +++R+ + E+
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTD----------YDIRYYI-YELL 135
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFG 245
AL Y HS I HRD+K N+++D R ++ D+G ++F + + ++ +
Sbjct: 136 KALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-NVRVASRY- 190
Query: 246 YLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
+ PE Q D S D++S G + ++ K+P F + + V +A
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 23/170 (13%)
Query: 132 NVVKLLGCCLE--TEFPLLVYEFIPNG---TLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
N+VKLL + ++ P L++E++ N LY L D +++R+ + E+
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTD----------YDIRYYI-YELL 136
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFG 245
AL Y HS I HRD+K N+++D R ++ D+G ++F + + ++ +
Sbjct: 137 KALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-NVRVASRY- 191
Query: 246 YLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
+ PE Q D S D++S G + ++ K+P F + + V +A
Sbjct: 192 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 241
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
+ P E + L HL N + LT + + ++ L Y+HS
Sbjct: 108 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 163
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 164 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGXVATRWYRAPEI 213
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 251
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 23/170 (13%)
Query: 132 NVVKLLGCCLE--TEFPLLVYEFIPNG---TLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
N+VKLL + ++ P L++E++ N LY L D +++R+ + E+
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTD----------YDIRYYI-YELL 137
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFG 245
AL Y HS I HRD+K N+++D R ++ D+G ++F + + ++ +
Sbjct: 138 KALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-NVRVASRY- 192
Query: 246 YLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
+ PE Q D S D++S G + ++ K+P F + + V +A
Sbjct: 193 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 242
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 23/170 (13%)
Query: 132 NVVKLLGCCLE--TEFPLLVYEFIPNG---TLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
N+VKLL + ++ P L++E++ N LY L D +++R+ + E+
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTD----------YDIRYYI-YELL 136
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFG 245
AL Y HS I HRD+K N+++D R ++ D+G ++F + + ++ +
Sbjct: 137 KALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-NVRVASRY- 191
Query: 246 YLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
+ PE Q D S D++S G + ++ K+P F + + V +A
Sbjct: 192 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 241
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 23/170 (13%)
Query: 132 NVVKLLGCCLE--TEFPLLVYEFIPNG---TLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
N+VKLL + ++ P L++E++ N LY L D +++R+ + E+
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTD----------YDIRYYI-YELL 135
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFG 245
AL Y HS I HRD+K N+++D R ++ D+G ++F + + ++ +
Sbjct: 136 KALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-NVRVASRY- 190
Query: 246 YLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
+ PE Q D S D++S G + ++ K+P F + + V +A
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 14/145 (9%)
Query: 147 LLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIK 206
L++ E + G L+ + +R T + ++ A+ +LHS I HRD+K
Sbjct: 83 LIIMECMEGGELFSRIQERGDQA---FTEREAAEIMRDIGTAIQFLHSHN---IAHRDVK 136
Query: 207 STNILLDERYR---AKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQLTDKSDV 263
N+L + + K+ DFG +K Q + T + Y+ PE + D+
Sbjct: 137 PENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCYTPY-YVAPEVLGPEKYDKSCDM 193
Query: 264 YSFGVVLVELLTGKKPIFSTGNTSQ 288
+S GV++ LL G P +S NT Q
Sbjct: 194 WSLGVIMYILLCGFPPFYS--NTGQ 216
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
+ P E + L HL N + LT + + ++ L Y+HS
Sbjct: 84 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 139
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 140 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 189
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 227
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 23/170 (13%)
Query: 132 NVVKLLGCCLE--TEFPLLVYEFIPNG---TLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
N+VKLL + ++ P L++E++ N LY L D +++R+ + E+
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTD----------YDIRYYI-YELL 135
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFG 245
AL Y HS I HRD+K N+++D R ++ D+G ++F + + ++ +
Sbjct: 136 KALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-NVRVASRY- 190
Query: 246 YLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
+ PE Q D S D++S G + ++ K+P F + + V +A
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
P E + L HL N + LT + + ++ L Y+HS
Sbjct: 88 DVFT----PARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 193
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 23/170 (13%)
Query: 132 NVVKLLGCCLE--TEFPLLVYEFIPNG---TLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
N+VKLL + ++ P L++E++ N LY L D +++R+ + E+
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTD----------YDIRYYI-YELL 135
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFG 245
AL Y HS I HRD+K N+++D R ++ D+G ++F + + ++ +
Sbjct: 136 KALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-NVRVASRY- 190
Query: 246 YLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
+ PE Q D S D++S G + ++ K+P F + + V +A
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 23/170 (13%)
Query: 132 NVVKLLGCCLE--TEFPLLVYEFIPNG---TLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
N+VKLL + ++ P L++E++ N LY L D +++R+ + E+
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTD----------YDIRYYI-YELL 156
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFG 245
AL Y HS I HRD+K N+++D R ++ D+G ++F + + ++ +
Sbjct: 157 KALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-NVRVASRY- 211
Query: 246 YLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
+ PE Q D S D++S G + ++ K+P F + + V +A
Sbjct: 212 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 261
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 23/170 (13%)
Query: 132 NVVKLLGCCLE--TEFPLLVYEFIPNG---TLYQHLHDRHQNEEYPLTWEMRFRVAIEVA 186
N+VKLL + ++ P L++E++ N LY L D +++R+ + E+
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTD----------YDIRYYI-YELL 135
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRA-KVADFGTSKFIAMDQTHVTTKIQGTFG 245
AL Y HS I HRD+K N+++D R ++ D+G ++F + + ++ +
Sbjct: 136 KALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY-NVRVASRY- 190
Query: 246 YLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQENVSLA 294
+ PE Q D S D++S G + ++ K+P F + + V +A
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
P E + L HL N + LT + + ++ L Y+HS
Sbjct: 88 DVFT----PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 193
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 29/210 (13%)
Query: 79 LGQGGQGTVYKGRLED---GRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVK 135
LG+G G V+ R++D G AVKK +L E++++EE + + ++ +V
Sbjct: 80 LGRGSFGEVH--RMKDKQTGFQCAVKKVRL-----EVFRVEELV----ACAGLSSPRIVP 128
Query: 136 LLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQ-NEEYPLTWEMRFRVAIEVAGALAYLHS 194
L G E + + E + G+L Q + E+ L + A+E L YLH+
Sbjct: 129 LYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYY---LGQALE---GLEYLHT 182
Query: 195 GASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMD---QTHVTTK-IQGTFGYLDP 249
I H D+K+ N+LL + RA + DFG + + D ++ +T I GT ++ P
Sbjct: 183 ---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP 239
Query: 250 EYHQSSQLTDKSDVYSFGVVLVELLTGKKP 279
E K D++S +++ +L G P
Sbjct: 240 EVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRI--IAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
++ + +G+G G V + RI A K K V+D ++ F EI I+ +
Sbjct: 26 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED-----VDRFKQEIEIMKSL 80
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQH-LHDRHQNEEYPLTWEMRFRVAIEVAG 187
+H N+++L + LV E G L++ +H R E R+ +V
Sbjct: 81 DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA------RIMKDVLS 134
Query: 188 ALAYLHSGASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 244
A+AY H + HRD+K N L K+ DFG + + + TK+ GT
Sbjct: 135 AVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-MRTKV-GTP 189
Query: 245 GYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 279
Y+ P+ + + D +S GV++ LL G P
Sbjct: 190 YYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPP 223
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 28/217 (12%)
Query: 72 HFNVNRI-LGQGGQGTVYKGRLED---GRIIAVKKSKLAVDDEELYKLEEFINEIFILSQ 127
H+ +++ LG+G G V+ R+ED G AVKK +L E+++ EE + +
Sbjct: 74 HWATHQLRLGRGSFGEVH--RMEDKQTGFQCAVKKVRL-----EVFRAEELM----ACAG 122
Query: 128 INHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
+ +V L G E + + E + G+L Q + E+ L + +
Sbjct: 123 LTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV-----KEQGCLPEDRALYYLGQALE 177
Query: 188 ALAYLHSGASSPIYHRDIKSTNILLD-ERYRAKVADFGTSKFIAMDQTH----VTTKIQG 242
L YLHS I H D+K+ N+LL + A + DFG + + D I G
Sbjct: 178 GLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPG 234
Query: 243 TFGYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 279
T ++ PE K DV+S +++ +L G P
Sbjct: 235 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V ++ G IAVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 116
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
P E + L HL N + LT + + ++ L Y+HS
Sbjct: 117 DVFT----PATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 172
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 173 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 222
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ + + D++S G ++ ELLTG+ T + +Q
Sbjct: 223 MLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQ 260
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
+ P E + L HL N + LT + + ++ L Y+HS
Sbjct: 107 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 162
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 163 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 212
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 250
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
+ P E + L HL N + LT + + ++ L Y+HS
Sbjct: 108 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 163
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 164 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 213
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 251
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
P E + L HL N + LT + + ++ L Y+HS
Sbjct: 93 DVFT----PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 149 AD---IIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 198
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 236
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
P E + L HL N + LT + + ++ L Y+HS
Sbjct: 94 DVFT----PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 150 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 199
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 237
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 71 NHFNVNRILGQGGQGTVYKGRLEDGRI--IAVKKSKLAVDDEELYKLEEFINEIFILSQI 128
++ + +G+G G V + RI A K K V+D ++ F EI I+ +
Sbjct: 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED-----VDRFKQEIEIMKSL 63
Query: 129 NHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQH-LHDRHQNEEYPLTWEMRFRVAIEVAG 187
+H N+++L + LV E G L++ +H R E R+ +V
Sbjct: 64 DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA------RIMKDVLS 117
Query: 188 ALAYLHSGASSPIYHRDIKSTNILL---DERYRAKVADFGTSKFIAMDQTHVTTKIQGTF 244
A+AY H + HRD+K N L K+ DFG + + + TK+ GT
Sbjct: 118 AVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-MRTKV-GTP 172
Query: 245 GYLDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKP 279
Y+ P+ + + D +S GV++ LL G P
Sbjct: 173 YYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPP 206
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 97
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
P E + L HL N + LT + + ++ L Y+HS
Sbjct: 98 DVFT----PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 153
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 154 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 203
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 204 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 241
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 200 IYHRDIKSTNILLDERYRA--KVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEYHQSSQL 257
I H D+K NILL ++ R+ KV DFG+S + + V IQ F Y PE ++
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCY---EHQRVYXXIQSRF-YRAPEVILGARY 276
Query: 258 TDKSDVYSFGVVLVELLTG 276
D++S G +L ELLTG
Sbjct: 277 GMPIDMWSLGCILAELLTG 295
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
P E + L HL N + LT + + ++ L Y+HS
Sbjct: 88 DVFT----PARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG + H ++ G T Y PE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDSELKILDFGLCR-------HTDDEMTGYVATRWYRAPEI 193
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 70/267 (26%)
Query: 70 TNHFNVNRILGQGGQGTVYKG--RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQ 127
+ + + ++G G G V + +LE R++A+KK +D L + + EI IL++
Sbjct: 52 PDRYEIRHLIGTGSYGHVCEAYDKLE-KRVVAIKKILRVFED--LIDCKRILREIAILNR 108
Query: 128 INHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNEEYPLTWEMRFRVAIEVAG 187
+NH +VVK+L + P V +F LY L E ++ FR + +
Sbjct: 109 LNHDHVVKVLDIVI----PKDVEKF---DELYVVL------EIADSDFKKLFRTPVYLTE 155
Query: 188 ------------ALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQ-- 233
+ Y+HS I HRD+K N L+++ KV DFG ++ + +
Sbjct: 156 LHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENG 212
Query: 234 ------------------THVTTKIQGTFGYLDPEYHQSSQL-------TDKSDVYSFGV 268
H + G++ ++++ +L T+ DV+S G
Sbjct: 213 NSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGC 272
Query: 269 VLVELLTGKKPIFSTGNTSQENVSLAA 295
+ ELL N +ENV+ A
Sbjct: 273 IFAELL----------NMIKENVAYHA 289
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
+ P E + L HL N + LT + + ++ L Y+HS
Sbjct: 88 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGXVATRWYRAPEI 193
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 95/224 (42%), Gaps = 28/224 (12%)
Query: 77 RILGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVK 135
+ +G G QG V G +AVKK ++ K E+ +L +NH+N++
Sbjct: 28 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAK--RAYRELVLLKCVNHKNIIS 85
Query: 136 LLGC-----CLETEFP--LLVYEFIPNGTLYQ--HLHDRHQNEEYPLTWEMRFRVAIEVA 186
LL LE EF LV E + + L Q H+ H+ Y L ++
Sbjct: 86 LLNVFTPQKTLE-EFQDVYLVMELM-DANLCQVIHMELDHERMSYLL---------YQML 134
Query: 187 GALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGY 246
+ +LHS I HRD+K +NI++ K+ DFG ++ + + + T T Y
Sbjct: 135 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTN--FMMTPYVVTRYY 189
Query: 247 LDPEYHQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 290
PE + D++S G ++ EL+ G T + Q N
Sbjct: 190 RAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWN 233
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
P E + L HL N + LT + + ++ L Y+HS
Sbjct: 93 DVFT----PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 149 AD---IIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 198
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 236
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
+ P E + L HL N + LT + + ++ L Y+HS
Sbjct: 93 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 149 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 198
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 236
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
+ P E + L HL N + LT + + ++ L Y+HS
Sbjct: 88 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 193
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
+ P E + L HL N + LT + + ++ L Y+HS
Sbjct: 84 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 139
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 140 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 189
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 227
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
P E + L HL N + LT + + ++ L Y+HS
Sbjct: 99 DVFT----PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 154
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 155 AD---IIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 204
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 242
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
P E + L HL N + LT + + ++ L Y+HS
Sbjct: 88 DVFT----PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 193
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
P E + L HL N + LT + + ++ L Y+HS
Sbjct: 88 DVFT----PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 193
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 18/219 (8%)
Query: 77 RILGQGGQGTV---YKGRLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNV 133
+ +G G QG V Y LE R +A+KK ++ K E+ ++ +NH+N+
Sbjct: 30 KPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAK--RAYRELVLMKCVNHKNI 85
Query: 134 VKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRHQNE--EYPLTWEMRFRVAIEVAGALAY 191
+ LL P E + + L D + ++ + L E + ++ + +
Sbjct: 86 IGLLNVFT----PQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 192 LHSGASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQGTFGYLDPEY 251
LHS I HRD+K +NI++ K+ DFG ++ + + T T Y PE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEV 196
Query: 252 HQSSQLTDKSDVYSFGVVLVELLTGKKPIFSTGNTSQEN 290
+ D++S G ++ E++ G T + Q N
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 235
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
+ P E + L HL N + LT + + ++ L Y+HS
Sbjct: 100 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 156 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 205
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 243
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
P E + L HL N + LT + + ++ L Y+HS
Sbjct: 88 DVFT----PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 193
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
P E + L HL N + LT + + ++ L Y+HS
Sbjct: 88 DVFT----PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 193
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKK--LSKPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
+ P E + L HL N + LT + + ++ L Y+HS
Sbjct: 100 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 156 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 205
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 243
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
+ P E + L HL N + LT + + ++ L Y+HS
Sbjct: 100 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 156 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 205
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 243
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
P E + L HL N + LT + + ++ L Y+HS
Sbjct: 93 DVFT----PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 149 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 198
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 236
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 86
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
P E + L HL N + LT + + ++ L Y+HS
Sbjct: 87 DVFT----PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 142
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 143 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 192
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 193 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 230
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 110
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
+ P E + L HL N + LT + + ++ L Y+HS
Sbjct: 111 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 166
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 167 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 216
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 254
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
+ P E + L HL N + LT + + ++ L Y+HS
Sbjct: 85 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 140
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 141 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 190
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 228
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
P E + L HL N + LT + + ++ L Y+HS
Sbjct: 88 DVFT----PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 144 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 193
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 110
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
P E + L HL N + LT + + ++ L Y+HS
Sbjct: 111 DVFT----PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 166
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 167 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGYVATRWYRAPEI 216
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 254
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
P E + L HL N + LT + + ++ L Y+HS
Sbjct: 95 DVFT----PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 151 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 200
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 238
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 85
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
+ P E + L HL N + LT + + ++ L Y+HS
Sbjct: 86 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 141
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 142 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 191
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 229
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
+ P E + L HL N + LT + + ++ L Y+HS
Sbjct: 107 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 162
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 163 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 212
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 250
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
P E + L HL N + LT + + ++ L Y+HS
Sbjct: 90 DVFT----PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 146 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 195
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 233
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
P E + L HL N + LT + + ++ L Y+HS
Sbjct: 90 DVFT----PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 146 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 195
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 233
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
+ P E + L HL N + LT + + ++ L Y+HS
Sbjct: 108 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 163
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 164 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 213
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 251
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
+ P E + L HL N + LT + + ++ L Y+HS
Sbjct: 85 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 140
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 141 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 190
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 228
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 105/249 (42%), Gaps = 28/249 (11%)
Query: 52 GSVIDRCKLFSSKELDKA----TNHFNVNRILGQGGQGTVYKG-RLEDGRIIAVKKSKLA 106
GS+ F +EL+K + +G G G+V + G +AVKK L+
Sbjct: 1 GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK--LS 58
Query: 107 VDDEELYKLEEFINEIFILSQINHRNVVKLLGCCLETEFPLLVYEFIPNGTLYQHLHDRH 166
+ + + E+ +L + H NV+ LL P E + L HL
Sbjct: 59 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT----PARSLEEFNDVYLVTHLMGAD 114
Query: 167 QN---EEYPLTWEMRFRVAIEVAGALAYLHSGASSPIYHRDIKSTNILLDERYRAKVADF 223
N + LT + + ++ L Y+HS I HRD+K +N+ ++E K+ DF
Sbjct: 115 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDF 171
Query: 224 GTSKFIAMDQTHVTTKIQG---TFGYLDPEYHQSSQLTDKS-DVYSFGVVLVELLTGKKP 279
G ++ H ++ G T Y PE + +++ D++S G ++ ELLTG+
Sbjct: 172 GLAR-------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 224
Query: 280 IFSTGNTSQ 288
T + Q
Sbjct: 225 FPGTDHIDQ 233
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 79 LGQGGQGTVYKG-RLEDGRIIAVKKSKLAVDDEELYKLEEFINEIFILSQINHRNVVKLL 137
+G G G+V + G +AVKK L+ + + + E+ +L + H NV+ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 138 GCCLETEFPLLVYEFIPNGTLYQHLHDRHQN---EEYPLTWEMRFRVAIEVAGALAYLHS 194
+ P E + L HL N + LT + + ++ L Y+HS
Sbjct: 99 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 154
Query: 195 GASSPIYHRDIKSTNILLDERYRAKVADFGTSKFIAMDQTHVTTKIQG---TFGYLDPEY 251
I HRD+K +N+ ++E K+ DFG ++ H ++ G T Y PE
Sbjct: 155 AD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 204
Query: 252 HQSSQLTDKS-DVYSFGVVLVELLTGKKPIFSTGNTSQ 288
+ +++ D++S G ++ ELLTG+ T + Q
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 242
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,849,033
Number of Sequences: 62578
Number of extensions: 400077
Number of successful extensions: 3537
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 217
Number of HSP's that attempted gapping in prelim test: 1004
Number of HSP's gapped (non-prelim): 1130
length of query: 360
length of database: 14,973,337
effective HSP length: 100
effective length of query: 260
effective length of database: 8,715,537
effective search space: 2266039620
effective search space used: 2266039620
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)