BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040767
(476 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 204/415 (49%), Gaps = 15/415 (3%)
Query: 58 FIKNRMKSYGPIFRTSLVGRPVIISTDPDLNYFIFQQEGQLFQSWYPDTFTEIFGRQNVG 117
F K R + +GPIF+T L G+ VI + N F+F +E + FQ+ +P + + G +
Sbjct: 35 FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWPLSTRILLGPNALA 94
Query: 118 SLHGFMYRYLKNMVLNLFGPESLRKMLPEVEQVARARLQQWSSQDTVELKEATATMIFDL 177
+ G ++R + ++ F P +L LP+++ + + L+QW + V M FD+
Sbjct: 95 TQMGEIHRSRRKILYQAFLPRTLDSYLPKMDGIVQGYLEQWGKANEVIWYPQLRRMTFDV 154
Query: 178 TAKKLISYDQEKSSEN--LRENFVAFMEGLISFPLDIPGTAYHKCLQGRERAMKKLKNLL 235
A + EK S+N L F +++GL S P+ +P T + K + R + +L+ ++
Sbjct: 155 AATLFMG---EKVSQNPQLFPWFETYIQGLFSLPIPLPNTLFGKSQRARALLLAELEKII 211
Query: 236 QERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAITLAIKFL 295
+ R+ P E+ D +L L+ D + +LLFA ET + A++ L
Sbjct: 212 KARQQQPPSEE-DALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLL 270
Query: 296 SENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVPGIFRKA 355
++ + +++ +E +N+ + LT K M Y Q + E RL V G FR+
Sbjct: 271 GQHSDIRERVRQE-----QNKLQLSQELTAETLKKMPYLDQVLQEVLRLIPPVGGGFREL 325
Query: 356 LRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRW--KGMETNCASKNFMAFG 413
++D QF+G+ P GW V H +P Y DP F+P R+ G T+ + FG
Sbjct: 326 IQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFG 385
Query: 414 GGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIRGGN--IVRTPGIQFPNGFHVRI 466
GG+R C+G +F +++M +F + ++ W + G N +V TP + + V++
Sbjct: 386 GGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLELVVTPSPRPKDNLRVKL 440
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 183/428 (42%), Gaps = 34/428 (7%)
Query: 61 NRMKSYGPIFRTSLVGRPVIISTDPDLNYFI-----FQQEGQLFQSWYPDTFTEIFGRQN 115
++++ +G + R L + V T+P+L + + G L++S + G++
Sbjct: 49 SQLRDHGDVVRIKLGPKTVYAVTNPELTGALALNPDYHIAGPLWES-----LEGLLGKEG 103
Query: 116 VGSLHGFMYRYLKNMVLNLFGPESLRKMLPEVEQVARARLQQWSSQDTVELKEATATMIF 175
V + +G ++R + + F +++ P +E+ A A ++W TV+ + +
Sbjct: 104 VATANGPLHRRQRRTIQPAFRLDAIPAYGPIMEEEAHALTERWQPGKTVDATSESFRVAV 163
Query: 176 DLTAKKLI--SYDQEKSSENLRENFVAFMEGL---ISFPLDIPGTAYHKCLQGRERAMKK 230
+ A+ L+ Y E++ E L G+ + PL G Y L R
Sbjct: 164 RVAARCLLRGQYMDERA-ERLCVALATVFRGMYRRMVVPL---GPLYRLPLPANRRFNDA 219
Query: 231 LKNL-------LQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFET 283
L +L + ERRA+ +K D +L+ G + E D + +L ET
Sbjct: 220 LADLHLLVDEIIAERRASGQK-PDDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSET 278
Query: 284 TSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETAR 343
+ I ++ L+++P ++ +E EA+ R + + + + + +T I E R
Sbjct: 279 IASTIMWLLQALADHPEHADRIRDEVEAVTGGRP-----VAFEDVRKLRHTGNVIVEAMR 333
Query: 344 LANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRW-KGMET 402
L V + R+A+ + + GY IPAG ++ P A+ +P Y+D L F+P RW
Sbjct: 334 LRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAA 393
Query: 403 NCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIRGGNIVRTPGIQF-PNG 461
N F G R C F+ Q+ + TKYR++ + G N GI P+
Sbjct: 394 NVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSNDAVRVGITLRPHD 453
Query: 462 FHVRIIKK 469
VR + +
Sbjct: 454 LLVRPVAR 461
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 185/414 (44%), Gaps = 33/414 (7%)
Query: 64 KSYGPIFRTSLVGRPVIISTDPDLNYFIFQQEG-QLFQSWYPDTFTEI-FGRQNVGSLHG 121
K YG ++ +PV+ TDPD+ + +E +F + P F + F + +
Sbjct: 46 KKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRP--FGPVGFMKSAISIAED 103
Query: 122 FMYRYLKNMVLNLFGPESLRKMLPEVEQ----VARARLQQWSSQDTVELKEATATMIFDL 177
++ L++++ F L++M+P + Q + R ++ + V LK+ D+
Sbjct: 104 EEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDV 163
Query: 178 TAKKLISYD-------QEKSSEN----LRENFV-AFMEGLISFPLDIPG-TAYHKCLQGR 224
+ Q+ EN LR +F+ F + FP IP + C+ R
Sbjct: 164 ITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPR 223
Query: 225 ERA---MKKLKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIA-LDLM---FVLL 277
E K +K + + R + +K + DF ++ + T +A++ L+L+ + +
Sbjct: 224 EVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFI 283
Query: 278 FASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQF 337
FA +ETTS ++ + L+ +P V ++L EE +A+L N+ + T+ M Y
Sbjct: 284 FAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNK----APPTYDTVLQMEYLDMV 339
Query: 338 INETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRW 397
+NET RL I + R +D++ G IP G VM+ A+H +P + +P F P R+
Sbjct: 340 VNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERF 399
Query: 398 -KGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIRGGNI 450
K + N + FG G R C+G F + M + L L + ++ + I
Sbjct: 400 SKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQI 453
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 185/414 (44%), Gaps = 33/414 (7%)
Query: 64 KSYGPIFRTSLVGRPVIISTDPDLNYFIFQQEG-QLFQSWYPDTFTEI-FGRQNVGSLHG 121
K YG ++ +PV+ TDPD+ + +E +F + P F + F + +
Sbjct: 44 KKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRP--FGPVGFMKSAISIAED 101
Query: 122 FMYRYLKNMVLNLFGPESLRKMLPEVEQ----VARARLQQWSSQDTVELKEATATMIFDL 177
++ L++++ F L++M+P + Q + R ++ + V LK+ D+
Sbjct: 102 EEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDV 161
Query: 178 TAKKLISYD-------QEKSSEN----LRENFV-AFMEGLISFPLDIPG-TAYHKCLQGR 224
+ Q+ EN LR +F+ F + FP IP + C+ R
Sbjct: 162 ITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPR 221
Query: 225 ERA---MKKLKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIA-LDLM---FVLL 277
E K +K + + R + +K + DF ++ + T +A++ L+L+ + +
Sbjct: 222 EVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFI 281
Query: 278 FASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQF 337
FA +ETTS ++ + L+ +P V ++L EE +A+L N+ + T+ M Y
Sbjct: 282 FAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNK----APPTYDTVLQMEYLDMV 337
Query: 338 INETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRW 397
+NET RL I + R +D++ G IP G VM+ A+H +P + +P F P R+
Sbjct: 338 VNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERF 397
Query: 398 -KGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIRGGNI 450
K + N + FG G R C+G F + M + L L + ++ + I
Sbjct: 398 SKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQI 451
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 185/414 (44%), Gaps = 33/414 (7%)
Query: 64 KSYGPIFRTSLVGRPVIISTDPDLNYFIFQQEG-QLFQSWYPDTFTEI-FGRQNVGSLHG 121
K YG ++ +PV+ TDPD+ + +E +F + P F + F + +
Sbjct: 45 KKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRP--FGPVGFMKSAISIAED 102
Query: 122 FMYRYLKNMVLNLFGPESLRKMLPEVEQ----VARARLQQWSSQDTVELKEATATMIFDL 177
++ L++++ F L++M+P + Q + R ++ + V LK+ D+
Sbjct: 103 EEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDV 162
Query: 178 TAKKLISYD-------QEKSSEN----LRENFV-AFMEGLISFPLDIPG-TAYHKCLQGR 224
+ Q+ EN LR +F+ F + FP IP + C+ R
Sbjct: 163 ITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPR 222
Query: 225 ERA---MKKLKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIA-LDLM---FVLL 277
E K +K + + R + +K + DF ++ + T +A++ L+L+ + +
Sbjct: 223 EVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFI 282
Query: 278 FASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQF 337
FA +ETTS ++ + L+ +P V ++L EE +A+L N+ + T+ M Y
Sbjct: 283 FAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNK----APPTYDTVLQMEYLDMV 338
Query: 338 INETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRW 397
+NET RL I + R +D++ G IP G VM+ A+H +P + +P F P R+
Sbjct: 339 VNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERF 398
Query: 398 -KGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIRGGNI 450
K + N + FG G R C+G F + M + L L + ++ + I
Sbjct: 399 SKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQI 452
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 169/401 (42%), Gaps = 18/401 (4%)
Query: 58 FIKNRMKSYGPIFRTSLVGRPVIISTDPDLNYFIFQQEGQLF--QSWYPDTFTEIFGRQN 115
F++N + YGP+F ++VG+ D +F + + + Y T +FG+
Sbjct: 36 FLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPVFGKGV 95
Query: 116 VGSLHGFMYRYLKNMVLNLFGPESLRKMLPEVEQVARARLQQWSSQDTVELKEATATMIF 175
+ ++ K M+ + ++ + +E+ + + W + EA + +I
Sbjct: 96 AYDVPNPVFLEQKKMLKSGLNIAHFKQHVSIIEKETKEYFESWGESGEKNVFEALSELII 155
Query: 176 DLTAKKLISYDQEKS--SENLRENFVAFMEGLISFPLDIPGTAYHKCLQGRERAMKKLKN 233
LTA + + +S +E + + + G +PG + R+RA +++K+
Sbjct: 156 -LTASHCLHGKEIRSQLNEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKD 214
Query: 234 L----LQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAIT 289
+ +Q+RR + K D +L K+G LT+ ++ LL A T+S
Sbjct: 215 IFYKAIQKRRQSQEK-IDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSA 273
Query: 290 LAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVP 349
FL+ + + K+ E + + EN+ LT+ + K + + I ET RL +
Sbjct: 274 WMGFFLARDKTLQKKCYLEQKTVCG--ENL-PPLTYDQLKDLNLLDRCIKETLRLRPPIM 330
Query: 350 GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKN- 408
+ R A GYTIP G V V P + + L FNP R+ ++ N AS
Sbjct: 331 IMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRY--LQDNPASGEK 388
Query: 409 --FMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIRG 447
++ FG G C+G +F VQ+ L Y + I G
Sbjct: 389 FAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDG 429
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 133/300 (44%), Gaps = 24/300 (8%)
Query: 166 LKEATATMIFDLTAKKLISYDQEK-------SSENLRENFVAFMEGLISFPLD--IPGTA 216
L +A + +I LT + YD + + E L+E E L + P+D IP A
Sbjct: 156 LDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVDRHIPALA 215
Query: 217 YHKCLQGRERAMKKLKNLLQERRA--NPRKEQSDFYDYVLKELQK-----EGTILTEAIA 269
K L+ ++ + +L LL E R +P + D + L E++K E + E +
Sbjct: 216 G-KVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLR 274
Query: 270 LDLMFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYK 329
+ ++ L A TTS + + + +P V +++ +E + ++ G +
Sbjct: 275 I-VVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMG----DQA 329
Query: 330 SMTYTFQFINETARLANIVP-GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYED 388
M YT I+E R +IVP G+ RDI+ +G+ IP G ++ +V + + +E
Sbjct: 330 HMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEK 389
Query: 389 PLAFNPSRWKGMETN-CASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIRG 447
P F+P + + + + F+ F G R C+G ++++ +F L + + G
Sbjct: 390 PFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTG 449
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 132/300 (44%), Gaps = 24/300 (8%)
Query: 166 LKEATATMIFDLTAKKLISYDQEK-------SSENLRENFVAFMEGLISFP--LDIPGTA 216
L +A + +I LT + YD + + E L+E E L + P L IP A
Sbjct: 156 LDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIPALA 215
Query: 217 YHKCLQGRERAMKKLKNLLQERRA--NPRKEQSDFYDYVLKELQK-----EGTILTEAIA 269
K L+ ++ + +L LL E R +P + D + L E++K E + E +
Sbjct: 216 G-KVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLR 274
Query: 270 LDLMFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYK 329
+ ++ L A TTS + + + +P V +++ +E + ++ G +
Sbjct: 275 I-VVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMG----DQA 329
Query: 330 SMTYTFQFINETARLANIVP-GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYED 388
M YT I+E R +IVP G+ RDI+ +G+ IP G ++ +V + + +E
Sbjct: 330 HMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEK 389
Query: 389 PLAFNPSRWKGMETN-CASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIRG 447
P F+P + + + + F+ F G R C+G ++++ +F L + + G
Sbjct: 390 PFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTG 449
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 6/168 (3%)
Query: 276 LLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTF 335
L+ A ETT+ + AI F++ P + Q+ +E + I+ + +W + M YT
Sbjct: 281 LIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIM----GPNGKPSWDDKCKMPYTE 336
Query: 336 QFINETARLANIVP-GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNP 394
++E R NIVP GIF D +GY+IP G V+ +VH + + DP F+P
Sbjct: 337 AVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHP 396
Query: 395 SRWKGMETNCASKN-FMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYR 441
R+ A K + F G R C+G +++M +F L ++
Sbjct: 397 ERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFH 444
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 164/411 (39%), Gaps = 45/411 (10%)
Query: 60 KNRMKSYGPIFRTSLVGRPVIISTDPDLNYFIFQQEGQLFQSWYPDTF-TEIFGRQNVGS 118
K ++KS IF ++VG+ V I DP + F ++ +F +FG G
Sbjct: 46 KRQLKSG--IFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVPVFGE---GV 100
Query: 119 LHGFMYRYLKNMVLNLFGPE----SLRKMLPEVEQVARARLQ-QWSSQD-TVELKEATAT 172
+ Y ++ LN E + +P ++ R + W + + L E +T
Sbjct: 101 AYAAPYPRMREQ-LNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCST 159
Query: 173 MIFDLTAKKLISYDQEKSSENLR-ENFVAFMEGLISFPLDIPGTAYH------------K 219
MI + + L D K + R +A ME + IP + +
Sbjct: 160 MIINTACQCLFGEDLRKRLDARRFAQLLAKMESSL-----IPAAVFLPILLKLPLPQSAR 214
Query: 220 CLQGRERAMKKLKNLLQERRA---NPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVL 276
C + R K L ++ R+A N SD +L + ++GT ++ ++
Sbjct: 215 CHEARTELQKILSEIIIARKAAAVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAA 274
Query: 277 LFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREY-KSMTYTF 335
+FA T+S+ T ++ L +P +K L EA+ K E + L + M +
Sbjct: 275 MFAGQHTSSITTTWSMLHLM-HPANVKHL----EALRKEIEEFPAQLNYNNVMDEMPFAE 329
Query: 336 QFINETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPS 395
+ E+ R + + RK + D++ Y +P G + P H + + +P ++P
Sbjct: 330 RCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 389
Query: 396 RWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIR 446
R + +E F+ FG G+ C+G F +Q+ L Y +Q +R
Sbjct: 390 RDEKVEGA-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLR 435
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 6/168 (3%)
Query: 276 LLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTF 335
L+ A ETT+ + AI F++ P + Q+ +E + I+ + +W + M YT
Sbjct: 281 LIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIM----GPNGKPSWDDKCKMPYTE 336
Query: 336 QFINETARLANIVP-GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNP 394
++E R NIVP GIF D +GY+IP G V+ +VH + + DP F+P
Sbjct: 337 AVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHP 396
Query: 395 SRWKGMETNCASKN-FMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYR 441
R+ A K + F G R C+G +++M +F L ++
Sbjct: 397 ERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFH 444
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 111/248 (44%), Gaps = 25/248 (10%)
Query: 240 ANPRKEQSDFYDYVLKELQKEGTILTEAIA----LDLMFVLLFASFETTSVAITLAIKFL 295
+NPR DF D L ++K+ + + + + L FA ETTS + +
Sbjct: 240 SNPR----DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLM 295
Query: 296 SENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVP-GIFRK 354
+ P V +++ +E E ++ + H + M YT I+E RL +++P G+
Sbjct: 296 LKYPHVTERVQKEIEQVIGS----HRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHT 351
Query: 355 ALRDIQFKGYTIPAGWAVM-VCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASK---NFM 410
+D QF+GY IP V V A+H +P +E P FNP + ++ N A K FM
Sbjct: 352 VTKDTQFRGYVIPKNTEVFPVLSSALH-DPRYFETPNTFNPGHF--LDANGALKRNEGFM 408
Query: 411 AFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQA-IRGGNIVRTP---GI-QFPNGFHVR 465
F G R C+G + ++ +F L + + + +I TP G+ P + +R
Sbjct: 409 PFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNVPPSYQIR 468
Query: 466 IIKKDATH 473
+ + H
Sbjct: 469 FLARHHHH 476
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 111/248 (44%), Gaps = 25/248 (10%)
Query: 240 ANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFV----LLFASFETTSVAITLAIKFL 295
+NPR DF D L ++K+ + + + + L FA ETTS + +
Sbjct: 240 SNPR----DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLM 295
Query: 296 SENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVP-GIFRK 354
+ P V +++ +E E ++ + H + M YT I+E RL +++P G+
Sbjct: 296 LKYPHVTERVQKEIEQVIGS----HRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHT 351
Query: 355 ALRDIQFKGYTIPAGWAVM-VCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASK---NFM 410
+D QF+GY IP V V A+H +P +E P FNP + ++ N A K FM
Sbjct: 352 VTKDTQFRGYVIPKNTEVFPVLSSALH-DPRYFETPNTFNPGHF--LDANGALKRNEGFM 408
Query: 411 AFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQA-IRGGNIVRTP---GI-QFPNGFHVR 465
F G R C+G + ++ +F L + + + +I TP G+ P + +R
Sbjct: 409 PFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNVPPSYQIR 468
Query: 466 IIKKDATH 473
+ + H
Sbjct: 469 FLARHHHH 476
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 240 ANPRKEQSDFYDYVLKELQKEGTILTEAIA----LDLMFVLLFASFETTSVAITLAIKFL 295
+NPR DF D L ++K+ + + + + L FA ETTS + +
Sbjct: 240 SNPR----DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLM 295
Query: 296 SENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVP-GIFRK 354
+ P V +++ +E E ++ + H + M YT I+E RL +++P G+
Sbjct: 296 LKYPHVTERVQKEIEQVIGS----HRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHT 351
Query: 355 ALRDIQFKGYTIPAGWAVM-VCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASK---NFM 410
+D QF+GY IP V V A+H +P +E P FNP + ++ N A K FM
Sbjct: 352 VTKDTQFRGYVIPKNTEVFPVLSSALH-DPRYFETPNTFNPGHF--LDANGALKRNEGFM 408
Query: 411 AFGGGMRFCVGTDFTKVQMAVFLHCFLTKY 440
F G R C+G + ++ +F L +
Sbjct: 409 PFSLGKRICLGEGIARTELFLFFTTILQNF 438
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 113/248 (45%), Gaps = 25/248 (10%)
Query: 240 ANPRKEQSDFYD-YVLKELQKEGTILTEAIALDLMFVLL---FASFETTSVAITLAIKFL 295
+NPR DF D Y+L+ + + +E +L+ +L FA ETTS + +
Sbjct: 240 SNPR----DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLM 295
Query: 296 SENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVP-GIFRK 354
+ P V +++ +E E ++ + H + M YT I+E RL +++P G+
Sbjct: 296 LKYPHVTERVQKEIEQVIGS----HRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHT 351
Query: 355 ALRDIQFKGYTIPAGWAVM-VCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASK---NFM 410
+D QF+GY IP V V A+H +P +E P FNP + ++ N A K FM
Sbjct: 352 VTKDTQFRGYVIPKNTEVFPVLSSALH-DPRYFETPNTFNPGHF--LDANGALKRNEGFM 408
Query: 411 AFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQA-IRGGNIVRTP---GI-QFPNGFHVR 465
F G R C G + ++ +F L + + + +I TP G+ P + +R
Sbjct: 409 PFSLGKRICAGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNVPPSYQIR 468
Query: 466 IIKKDATH 473
+ + H
Sbjct: 469 FLARHHHH 476
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 11/208 (5%)
Query: 241 NPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLF-ASFETTSVAITLAIKFLSENP 299
NPR DF D L ++++E + +L + LF A ETTS + ++ L ++P
Sbjct: 241 NPR----DFIDCFLIKMEQENNLEFTLESLVIAVSDLFGAGTETTSTTLRYSLLLLLKHP 296
Query: 300 LVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVPGIFRKAL-RD 358
V ++ EE E ++ H ++ M YT I+E R +++P A+ RD
Sbjct: 297 EVAARVQEEIERVIGR----HRSPCMQDRSRMPYTDAVIHEIQRFIDLLPTNLPHAVTRD 352
Query: 359 IQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCA-SKNFMAFGGGMR 417
++F+ Y IP G ++ +V + + +P F+P + N S FM F G R
Sbjct: 353 VRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDYFMPFSAGKR 412
Query: 418 FCVGTDFTKVQMAVFLHCFLTKYRWQAI 445
CVG ++++ +FL L ++ Q++
Sbjct: 413 MCVGEGLARMELFLFLTSILQNFKLQSL 440
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 163/411 (39%), Gaps = 45/411 (10%)
Query: 60 KNRMKSYGPIFRTSLVGRPVIISTDPDLNYFIFQQEGQLFQSWYPDTF-TEIFGRQNVGS 118
K ++KS IF ++VG+ V I DP + F ++ +F +FG G
Sbjct: 46 KRQLKSG--IFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVPVFGE---GV 100
Query: 119 LHGFMYRYLKNMVLNLFGPE----SLRKMLPEVEQVARARLQ-QWSSQD-TVELKEATAT 172
+ Y ++ LN E + +P ++ R + W + + L E +T
Sbjct: 101 AYAAPYPRMREQ-LNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCST 159
Query: 173 MIFDLTAKKLISYDQEKSSENLR-ENFVAFMEGLISFPLDIPGTAYH------------K 219
MI + + L D K + R +A ME + IP + +
Sbjct: 160 MIINTACQCLFGEDLRKRLDARRFAQLLAKMESSL-----IPAAVFLPILLKLPLPQSAR 214
Query: 220 CLQGRERAMKKLKNLL---QERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVL 276
C + R K L ++ +E N SD +L + ++GT ++ ++
Sbjct: 215 CHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAA 274
Query: 277 LFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREY-KSMTYTF 335
+FA T+S+ T ++ L +P +K L EA+ K E + L + M +
Sbjct: 275 MFAGQHTSSITTTWSMLHLM-HPANVKHL----EALRKEIEEFPAQLNYNNVMDEMPFAE 329
Query: 336 QFINETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPS 395
+ E+ R + + RK + D++ Y +P G + P H + + +P ++P
Sbjct: 330 RCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 389
Query: 396 RWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIR 446
R + +E F+ FG G+ C+G F +Q+ L Y +Q +R
Sbjct: 390 RDEKVEGA-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLR 435
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 163/411 (39%), Gaps = 45/411 (10%)
Query: 60 KNRMKSYGPIFRTSLVGRPVIISTDPDLNYFIFQQEGQLFQSWYPDTF-TEIFGRQNVGS 118
K ++KS IF ++VG+ V I DP + F ++ +F +FG G
Sbjct: 34 KRQLKSG--IFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVPVFGE---GV 88
Query: 119 LHGFMYRYLKNMVLNLFGPE----SLRKMLPEVEQVARARLQ-QWSSQD-TVELKEATAT 172
+ Y ++ LN E + +P ++ R + W + + L E +T
Sbjct: 89 AYAAPYPRMREQ-LNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCST 147
Query: 173 MIFDLTAKKLISYDQEKSSENLR-ENFVAFMEGLISFPLDIPGTAYH------------K 219
MI + + L D K + R +A ME + IP + +
Sbjct: 148 MIINTACQCLFGEDLRKRLDARRFAQLLAKMESSL-----IPAAVFLPILLKLPLPQSAR 202
Query: 220 CLQGRERAMKKLKNLL---QERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVL 276
C + R K L ++ +E N SD +L + ++GT ++ ++
Sbjct: 203 CHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAA 262
Query: 277 LFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREY-KSMTYTF 335
+FA T+S+ T ++ L +P +K L EA+ K E + L + M +
Sbjct: 263 MFAGQHTSSITTTWSMLHLM-HPANVKHL----EALRKEIEEFPAQLNYNNVMDEMPFAE 317
Query: 336 QFINETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPS 395
+ E+ R + + RK + D++ Y +P G + P H + + +P ++P
Sbjct: 318 RCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 377
Query: 396 RWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIR 446
R + +E F+ FG G+ C+G F +Q+ L Y +Q +R
Sbjct: 378 RDEKVEGA-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLR 423
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 163/411 (39%), Gaps = 45/411 (10%)
Query: 60 KNRMKSYGPIFRTSLVGRPVIISTDPDLNYFIFQQEGQLFQSWYPDTF-TEIFGRQNVGS 118
K ++KS IF ++VG+ V I DP + F ++ +F +FG G
Sbjct: 33 KRQLKSG--IFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVPVFGE---GV 87
Query: 119 LHGFMYRYLKNMVLNLFGPE----SLRKMLPEVEQVARARLQ-QWSSQD-TVELKEATAT 172
+ Y ++ LN E + +P ++ R + W + + L E +T
Sbjct: 88 AYAAPYPRMREQ-LNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCST 146
Query: 173 MIFDLTAKKLISYDQEKSSENLR-ENFVAFMEGLISFPLDIPGTAYH------------K 219
MI + + L D K + R +A ME + IP + +
Sbjct: 147 MIINTACQCLFGEDLRKRLDARRFAQLLAKMESSL-----IPAAVFLPILLKLPLPQSAR 201
Query: 220 CLQGRERAMKKLKNLL---QERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVL 276
C + R K L ++ +E N SD +L + ++GT ++ ++
Sbjct: 202 CHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAA 261
Query: 277 LFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREY-KSMTYTF 335
+FA T+S+ T ++ L +P +K L EA+ K E + L + M +
Sbjct: 262 MFAGQHTSSITTTWSMLHLM-HPANVKHL----EALRKEIEEFPAQLNYNNVMDEMPFAE 316
Query: 336 QFINETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPS 395
+ E+ R + + RK + D++ Y +P G + P H + + +P ++P
Sbjct: 317 RCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 376
Query: 396 RWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIR 446
R + +E F+ FG G+ C+G F +Q+ L Y +Q +R
Sbjct: 377 RDEKVEGA-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLR 422
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 163/411 (39%), Gaps = 45/411 (10%)
Query: 60 KNRMKSYGPIFRTSLVGRPVIISTDPDLNYFIFQQEGQLFQSWYPDTF-TEIFGRQNVGS 118
K ++KS IF ++VG+ V I DP + F ++ +F +FG G
Sbjct: 33 KRQLKSG--IFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVPVFGE---GV 87
Query: 119 LHGFMYRYLKNMVLNLFGPE----SLRKMLPEVEQVARARLQ-QWSSQD-TVELKEATAT 172
+ Y ++ LN E + +P ++ R + W + + L E +T
Sbjct: 88 AYAAPYPRMREQ-LNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCST 146
Query: 173 MIFDLTAKKLISYDQEKSSENLR-ENFVAFMEGLISFPLDIPGTAYH------------K 219
MI + + L D K + R +A ME + IP + +
Sbjct: 147 MIINTACQCLFGEDLRKRLDARRFAQLLAKMESSL-----IPAAVFLPILLKLPLPQSAR 201
Query: 220 CLQGRERAMKKLKNLL---QERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVL 276
C + R K L ++ +E N SD +L + ++GT ++ ++
Sbjct: 202 CHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAA 261
Query: 277 LFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREY-KSMTYTF 335
+FA T+S+ T ++ L +P +K L EA+ K E + L + M +
Sbjct: 262 MFAGQHTSSITTTWSMLHLM-HPANVKHL----EALRKEIEEFPAQLNYNNVMDEMPFAE 316
Query: 336 QFINETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPS 395
+ E+ R + + RK + D++ Y +P G + P H + + +P ++P
Sbjct: 317 RCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 376
Query: 396 RWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIR 446
R + +E F+ FG G+ C+G F +Q+ L Y +Q +R
Sbjct: 377 RDEKVEGA-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLR 422
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 163/411 (39%), Gaps = 45/411 (10%)
Query: 60 KNRMKSYGPIFRTSLVGRPVIISTDPDLNYFIFQQEGQLFQSWYPDTF-TEIFGRQNVGS 118
K ++KS IF ++VG+ V I DP + F ++ +F +FG G
Sbjct: 32 KRQLKSG--IFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVPVFGE---GV 86
Query: 119 LHGFMYRYLKNMVLNLFGPE----SLRKMLPEVEQVARARLQ-QWSSQD-TVELKEATAT 172
+ Y ++ LN E + +P ++ R + W + + L E +T
Sbjct: 87 AYAAPYPRMREQ-LNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCST 145
Query: 173 MIFDLTAKKLISYDQEKSSENLR-ENFVAFMEGLISFPLDIPGTAYH------------K 219
MI + + L D K + R +A ME + IP + +
Sbjct: 146 MIINTACQCLFGEDLRKRLDARRFAQLLAKMESSL-----IPAAVFLPILLKLPLPQSAR 200
Query: 220 CLQGRERAMKKLKNLL---QERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVL 276
C + R K L ++ +E N SD +L + ++GT ++ ++
Sbjct: 201 CHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAA 260
Query: 277 LFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREY-KSMTYTF 335
+FA T+S+ T ++ L +P +K L EA+ K E + L + M +
Sbjct: 261 MFAGQHTSSITTTWSMLHLM-HPANVKHL----EALRKEIEEFPAQLNYNNVMDEMPFAE 315
Query: 336 QFINETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPS 395
+ E+ R + + RK + D++ Y +P G + P H + + +P ++P
Sbjct: 316 RCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPE 375
Query: 396 RWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIR 446
R + +E F+ FG G+ C+G F +Q+ L Y +Q +R
Sbjct: 376 RDEKVEGA-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLR 421
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 141/304 (46%), Gaps = 30/304 (9%)
Query: 175 FDLTAKKLISYDQEKSSENLRENFVAFMEGLISFPLDI---PGTAYHKCLQGRERAMKKL 231
FD ++ ++ EK +EN+R +++ +FP I PGT ++K L+ +
Sbjct: 170 FDYKDQQFLNL-MEKLNENIRIVSTPWIQICNNFPTIIDYFPGT-HNKLLKNLAFMESDI 227
Query: 232 KNLLQERRA-----NPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFV----LLFASFE 282
++E + NPR DF D L +++KE ++ + + LL A E
Sbjct: 228 LEKVKEHQESMDINNPR----DFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTE 283
Query: 283 TTSVAITLAIKFLSENPLVLKQLTEEHEAIL-KNRENVHSGLTWREYKSMTYTFQFINET 341
TTS + A+ L ++P V ++ EE E ++ +NR ++ M YT ++E
Sbjct: 284 TTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPC-----MQDRGHMPYTDAVVHEV 338
Query: 342 ARLANIVPGIFRKALR-DIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGM 400
R +++P A+ D++F+ Y IP G ++ +V + ++ +P F+P +
Sbjct: 339 QRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDE 398
Query: 401 ETNCASKN-FMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQA-IRGGNIVRTPGIQF 458
N N FM F G R CVG ++++ +FL L + ++ I ++ TP +
Sbjct: 399 GGNFKKSNYFMPFSAGKRICVGEGLARMELFLFLTFILQNFNLKSLIDPKDLDTTPVV-- 456
Query: 459 PNGF 462
NGF
Sbjct: 457 -NGF 459
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 20/210 (9%)
Query: 240 ANPRKEQSDFYDYVLKELQKEGTILTEAIA---LDLMFVLLFAS-FETTSVAITLAIKFL 295
+NPR DF D L ++K+ + + L L + LFA+ ETTS + +
Sbjct: 240 SNPR----DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLM 295
Query: 296 SENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVP-GIFRK 354
+ P V +++ +E E ++ + H + M YT I+E RL +++P G+
Sbjct: 296 LKYPHVTERVQKEIEQVIGS----HRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHT 351
Query: 355 ALRDIQFKGYTIPAGWAVM-VCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASK---NFM 410
+D QF+GY IP V V A+H +P +E P FNP + ++ N A K FM
Sbjct: 352 VTKDTQFRGYVIPKNTEVFPVLSSALH-DPRYFETPNTFNPGHF--LDANGALKRNEGFM 408
Query: 411 AFGGGMRFCVGTDFTKVQMAVFLHCFLTKY 440
F G R C+G + ++ +F L +
Sbjct: 409 PFSLGKRICLGEGIARTELFLFFTTILQNF 438
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 121/269 (44%), Gaps = 23/269 (8%)
Query: 191 SENLRENFVAFMEGLISFPLDI---PGTAYHKCLQGRERAMKKLKNLLQERRA-----NP 242
+EN R +++ +FPL I PGT ++K L+ ++ ++E +A NP
Sbjct: 184 NENFRILNSPWIQVCNNFPLLIDCFPGT-HNKVLKNVALTRSYIREKVKEHQASLDVNNP 242
Query: 243 RKEQSDFYDYVLKELQKEGTILTEAIALDLMF----VLLFASFETTSVAITLAIKFLSEN 298
R DF D L ++++E ++ + L A ETTS + + L ++
Sbjct: 243 R----DFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKH 298
Query: 299 PLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVP-GIFRKALR 357
P V ++ EE + ++ H ++ M YT ++E R +++VP G+
Sbjct: 299 PEVTAKVQEEIDHVIGR----HRSPCMQDRSHMPYTDAVVHEIQRYSDLVPTGVPHAVTT 354
Query: 358 DIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKN-FMAFGGGM 416
D +F+ Y IP G +M +V + ++ +P F+P + N + FM F G
Sbjct: 355 DTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDYFMPFSAGK 414
Query: 417 RFCVGTDFTKVQMAVFLHCFLTKYRWQAI 445
R C G ++++ +FL L + +++
Sbjct: 415 RICAGEGLARMELFLFLTTILQNFNLKSV 443
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 190/450 (42%), Gaps = 63/450 (14%)
Query: 54 DIPPFIKNRMKSYGPIFRTSLVGRPVIISTDPDLNYFIFQQEG--QLFQSWYPDTFTEIF 111
DI + N K YGP+F +P+++ L+ + +E L + + +
Sbjct: 30 DISKSLTNLSKVYGPVFTLYFGLKPIVV-----LHGYEAVKEALIDLGEEFSGRGIFPLA 84
Query: 112 GRQNVGSLHGFMY---------RYLKNMVLNLFGPESLRKMLPEVEQVARARLQQW---- 158
R N G G ++ R M L FG R + V++ AR +++
Sbjct: 85 ERANRG--FGIVFSNGKKWKEIRRFSLMTLRNFG-MGKRSIEDRVQEEARCLVEELRKTK 141
Query: 159 --SSQDTVELKEATATMIFDLTAKKLISY-DQ------EKSSENLRENFVAFMEGLISFP 209
T L A +I + K Y DQ EK +EN+ +++ +FP
Sbjct: 142 ASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIEILSSPWIQVYNNFP 201
Query: 210 --LD-IPGTAYHKCLQGRERAMKK--LKNLLQERRANPRKEQSDFYDYVLKELQKEG--- 261
LD PGT H L MK L+ + + + + DF D L +++KE
Sbjct: 202 ALLDYFPGT--HNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQ 259
Query: 262 ----TILT-EAIALDLMFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAIL-KN 315
TI + E A+DL A ETTS + A+ L ++P V ++ EE E ++ +N
Sbjct: 260 PSEFTIESLENTAVDL----FGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRN 315
Query: 316 RENVHSGLTWREYKSMTYTFQFINETARLANIVPGIFRKALR-DIQFKGYTIPAGWAVMV 374
R ++ M YT ++E R +++P A+ DI+F+ Y IP G +++
Sbjct: 316 RSPC-----MQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILI 370
Query: 375 CPPAVHLNPSKYEDPLAFNPSRWKGMETNCA-SKNFMAFGGGMRFCVGTDFTKVQMAVFL 433
+V + ++ +P F+P + N SK FM F G R CVG +++ +FL
Sbjct: 371 SLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFL 430
Query: 434 HCFLTKYRWQA-IRGGNIVRTPGIQFPNGF 462
L + ++ + N+ TP + NGF
Sbjct: 431 TSILQNFNLKSLVDPKNLDTTPVV---NGF 457
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 108/227 (47%), Gaps = 24/227 (10%)
Query: 248 DFYDYVLKELQKEG-------TILT-EAIALDLMFVLLFASFETTSVAITLAIKFLSENP 299
DF D L +++KE TI + E A+DL A ETTS + A+ L ++P
Sbjct: 245 DFIDCFLMKMEKEKHNQPSEFTIESLENTAVDL----FGAGTETTSTTLRYALLLLLKHP 300
Query: 300 LVLKQLTEEHEAIL-KNRENVHSGLTWREYKSMTYTFQFINETARLANIVPGIFRKALR- 357
V ++ EE E ++ +NR ++ M YT ++E R +++P A+
Sbjct: 301 EVTAKVQEEIERVIGRNRSPC-----MQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTC 355
Query: 358 DIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCA-SKNFMAFGGGM 416
DI+F+ Y IP G +++ +V + ++ +P F+P + N SK FM F G
Sbjct: 356 DIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGK 415
Query: 417 RFCVGTDFTKVQMAVFLHCFLTKYRWQA-IRGGNIVRTPGIQFPNGF 462
R CVG +++ +FL L + ++ + N+ TP + NGF
Sbjct: 416 RICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVV---NGF 459
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 118/262 (45%), Gaps = 19/262 (7%)
Query: 190 SSENLRENFVAFMEGLISFPLDIPGTAYHKCLQGRERAMKKLKNLLQERRANPRKEQSDF 249
S+ L E F + M+ L P K LQG E + K K +R +P + DF
Sbjct: 193 STGQLYEMFSSVMKHLPG-----PQQQAFKELQGLEDFIAK-KVEHNQRTLDPNSPR-DF 245
Query: 250 YDYVLKELQKE-GTILTEAIALDLMFV---LLFASFETTSVAITLAIKFLSENPLVLKQL 305
D L +Q+E TE +L+ L FA ET S + L ++P V ++
Sbjct: 246 IDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKV 305
Query: 306 TEEHEAIL-KNRENVHSGLTWREYKSMTYTFQFINETARLANIVP-GIFRKALRDIQFKG 363
EE + ++ KNR+ + + M YT I+E R +++P G+ + +D +F+
Sbjct: 306 HEEIDRVIGKNRQP-----KFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKFRD 360
Query: 364 YTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNC-ASKNFMAFGGGMRFCVGT 422
+ +P G V +V +P + +P FNP + + S F+ F G R+C G
Sbjct: 361 FFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQFKKSDAFVPFSIGKRYCFGE 420
Query: 423 DFTKVQMAVFLHCFLTKYRWQA 444
++++ +F + +R+++
Sbjct: 421 GLARMELFLFFTTIMQNFRFKS 442
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 117/262 (44%), Gaps = 19/262 (7%)
Query: 190 SSENLRENFVAFMEGLISFPLDIPGTAYHKCLQGRERAMKKLKNLLQERRANPRKEQSDF 249
S+ L E F + M+ L P + LQG E + K K +R +P + DF
Sbjct: 193 STGQLYEMFSSVMKHLPG-----PQQQAFQLLQGLEDFIAK-KVEHNQRTLDPNSPR-DF 245
Query: 250 YDYVLKELQKE-GTILTEAIALDLMFV---LLFASFETTSVAITLAIKFLSENPLVLKQL 305
D L +Q+E TE +L+ L FA ET S + L ++P V ++
Sbjct: 246 IDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKV 305
Query: 306 TEEHEAIL-KNRENVHSGLTWREYKSMTYTFQFINETARLANIVP-GIFRKALRDIQFKG 363
EE + ++ KNR+ + + M Y I+E R +++P G+ R+ +D +F+
Sbjct: 306 HEEIDRVIGKNRQP-----KFEDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKFRD 360
Query: 364 YTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNC-ASKNFMAFGGGMRFCVGT 422
+ +P G V +V +PS + +P FNP + + S F+ F G R C G
Sbjct: 361 FFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGE 420
Query: 423 DFTKVQMAVFLHCFLTKYRWQA 444
++++ +F + +R ++
Sbjct: 421 GLARMELFLFFTTVMQNFRLKS 442
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 9/205 (4%)
Query: 255 KELQKEGTI-LTEAIALDLMFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAIL 313
K+L + + L++ ++++ L A F+T + AI+ ++ +L NP V +++ EE + ++
Sbjct: 265 KQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVI 324
Query: 314 KNRENVHSGLTWREYKSMTYTFQFINETARLANIVP-GIFRKALRDIQFKGYTIPAGWAV 372
L+ R + + Y FI ET R ++ VP I RD KG+ IP G V
Sbjct: 325 GRSRRPR--LSDRSH--LPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCV 380
Query: 373 MVCPPAVHLNPSKYEDPLAFNPSRW---KGMETNCASKNFMAFGGGMRFCVGTDFTKVQM 429
V ++ + + +P F P R+ G S+ + FG G R C+G + ++
Sbjct: 381 FVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEV 440
Query: 430 AVFLHCFLTKYRWQAIRGGNIVRTP 454
+FL L + + G + TP
Sbjct: 441 FLFLAILLQRVEFSVPLGVKVDMTP 465
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/411 (19%), Positives = 158/411 (38%), Gaps = 40/411 (9%)
Query: 58 FIKNRMKSYGPIFRTSLVGRPVIISTDPDLNYFIFQQEGQLFQSWYPDTF-TEIFGRQNV 116
F+ K YG IF ++ G + + D + F ++ +F +FG
Sbjct: 28 FMLKAKKKYGGIFTMNICGNRITVVGDVHQHSKFFTPRNEILSPREVYSFMVPVFGE--- 84
Query: 117 GSLHGFMYRYLKNMVLNLFGPE----SLRKMLPEVEQVARARLQQWSSQDTVELK--EAT 170
G + Y ++ LN E + P ++ R ++ ++D E+ +
Sbjct: 85 GVAYAAPYPRMREQ-LNFLAEELTVAKFQNFAPSIQHEVRKFMKANWNKDEGEINILDDC 143
Query: 171 ATMIFDLTAKKLISYDQEKSSENLR-ENFVAFMEG-------LISFPLDIPGTAYHKCLQ 222
+ MI + + L D K + + +A ME + + L +P ++C
Sbjct: 144 SAMIINTACQCLFGEDLRKRLDARQFAQLLAKMESCLIPAAVFLPWILKLPLPQSYRCRD 203
Query: 223 GRERAMKKLKNLL---QERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFA 279
R L ++ ++ A SD +L + ++GT +++ ++ +FA
Sbjct: 204 ARAELQDILSEIIIAREKEEAQKDTNTSDLLAGLLGAVYRDGTRMSQHEVCGMIVAAMFA 263
Query: 280 SFETTSVAITLAIKFLSENPLVLKQLTEEHEAILK-----NRENVHSGLTWREYKSMTYT 334
T+++ T ++ L +P + L + H+ I + N +NV + M +
Sbjct: 264 GQHTSTITTTWSLLHLM-DPRNKRHLAKLHQEIDEFPAQLNYDNV--------MEEMPFA 314
Query: 335 FQFINETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNP 394
Q E+ R + + RK L+ +Q Y +P G + P H + + +P +NP
Sbjct: 315 EQCARESIRRDPPLVMLMRKVLKPVQVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNP 374
Query: 395 SRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAI 445
R F FG G+ C+G F +Q+ L L Y ++ +
Sbjct: 375 ER----NMKLVDGAFCGFGAGVHKCIGEKFGLLQVKTVLATVLRDYDFELL 421
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 12/216 (5%)
Query: 232 KNLLQERRANPRKEQSDFYDYVLKELQKE------GTILTEAIALDLMFVLLFASFETTS 285
K L + + + + D DY+L+ + ++ G +L + + ++ L ETT+
Sbjct: 238 KQLRRHKESMVAGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVD-LFIGGTETTA 296
Query: 286 VAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLA 345
++ A+ FL +P + ++L EE + L + S +T+++ + I E RL
Sbjct: 297 STLSWAVAFLLHHPEIQRRLQEELDRELGPGASC-SRVTYKDRARLPLLNATIAEVLRLR 355
Query: 346 NIVP-GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNC 404
+VP + + R GY IP G V+ HL+ + +E P F P R+ +E
Sbjct: 356 PVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRF--LEPG- 412
Query: 405 ASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKY 440
A+ + +AFG G R C+G ++++ V L L +
Sbjct: 413 ANPSALAFGCGARVCLGESLARLELFVVLARLLQAF 448
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A ETTS ++ A+ FL +NP VL+++ EE +L V ++++ K +
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G VMV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVE 372
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A ETTS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 261 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 315
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL VP A D G Y + G +MV P +H + + + D +
Sbjct: 316 YVGMVLNEALRLWPTVPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 375
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 376 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 138/332 (41%), Gaps = 46/332 (13%)
Query: 114 QNVGSLHGFMYRYLKNMVLNLFGPESLRKMLPEVEQVARA---RLQQWSSQDTVELKEAT 170
+N+ + +G +R L+ +V F + M P VE + RL + + + V+L++
Sbjct: 85 ENMFTAYGPNHRKLRRLVAPAFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQEL 144
Query: 171 ATMIFDLTAKKLISYDQEKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQGRERAMKK 230
A + L+ Q++ R+ F A ++G+ LD + R +
Sbjct: 145 AYPLPIAVIGHLMGVPQDR-----RDGFRALVDGVFDTTLD-----QAEAQANTARLYEV 194
Query: 231 LKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAITL 290
L L+ +RA P + + ++ + +G L+ D + +++ A +ETT I
Sbjct: 195 LDQLIAAKRATPGDDMTSLL-IAARDDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQ 253
Query: 291 AIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVPG 350
A+ L P QL A+++ E +TW + + ET R V
Sbjct: 254 AVHTLLTRP---DQL-----ALVRKGE-----VTWAD---------VVEETLRHEPAVKH 291
Query: 351 I-FRKALRDIQF-KGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKN 408
+ R A+ DI G TI G ++ A + +P +ED F+ +R K
Sbjct: 292 LPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATR--------TVKE 343
Query: 409 FMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKY 440
+AFG G+ FC+G ++++ + L ++
Sbjct: 344 HLAFGHGVHFCLGAPLARMEVTLALESLFGRF 375
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A ETTS +T A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 259 IITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 313
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE R+ P A D G Y + G +MV P +H + + + D +
Sbjct: 314 YVGMVLNEALRIWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVE 373
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 374 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 115/262 (43%), Gaps = 19/262 (7%)
Query: 190 SSENLRENFVAFMEGLISFPLDIPGTAYHKCLQGRERAMKKLKNLLQERRANPRKEQSDF 249
S+ L E F + M+ L P +CLQG E + K K +R +P + DF
Sbjct: 193 STGQLYEMFSSVMKHLPG-----PQQQAFQCLQGLEDFIAK-KVEHNQRTLDPNSPR-DF 245
Query: 250 YDYVLKELQKE-GTILTEAIALDLMFV---LLFASFETTSVAITLAIKFLSENPLVLKQL 305
D L +Q+E TE +L+ L ET S + L ++P V ++
Sbjct: 246 IDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKV 305
Query: 306 TEEHEAIL-KNRENVHSGLTWREYKSMTYTFQFINETARLANIVP-GIFRKALRDIQFKG 363
EE + ++ KNR+ + + M Y I+E R +++P + R+ +D +F+
Sbjct: 306 HEEIDRVIGKNRQP-----KFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRD 360
Query: 364 YTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNC-ASKNFMAFGGGMRFCVGT 422
+ +P G V +V +PS + +P FNP + + S F+ F G R C G
Sbjct: 361 FFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGE 420
Query: 423 DFTKVQMAVFLHCFLTKYRWQA 444
++++ +F + +R ++
Sbjct: 421 GLARMELFLFFTTVMQNFRLKS 442
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 9/211 (4%)
Query: 249 FYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEE 308
+ + K + G ++ + ++L+ + A F+T + AI+ ++ +L P + +++ +E
Sbjct: 263 LFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKE 322
Query: 309 HEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVP-GIFRKALRDIQFKGYTIP 367
+ ++ + + Y FI ET R ++ +P I RD G+ IP
Sbjct: 323 LDTVIGRERRPR----LSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIP 378
Query: 368 AGWAVMVCPPAVHLNPSKYEDPLAFNPSRW---KGMETNCA-SKNFMAFGGGMRFCVGTD 423
V V V+ +P +EDP F P R+ G N S+ M FG G R C+G
Sbjct: 379 KKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEV 438
Query: 424 FTKVQMAVFLHCFLTKYRWQAIRGGNIVRTP 454
K ++ +FL L + + G + TP
Sbjct: 439 LAKWEIFLFLAILLQQLEFSVPPGVKVDLTP 469
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/407 (17%), Positives = 164/407 (40%), Gaps = 33/407 (8%)
Query: 64 KSYGPIFRTSLVGRPVIISTDPD-LNYFI----FQQEGQLFQSWYPDTFTEIFGRQNVGS 118
K YGP+ R ++ + +I T P+ + F+ + ++ +++++ +FG+ V
Sbjct: 21 KKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVSE 80
Query: 119 LHGFMYRYLKNMVLNLFGPESLRKMLP----EVEQVARARLQQWSSQDTVELKEATATMI 174
+ + + ++ F SL ++ + EQ+ + Q V +++
Sbjct: 81 CNYERWHKQRRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTA 140
Query: 175 FDLTAKKLISYDQE---KSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQGRERAMKKL 231
D+ AK + + + L + +EG+ + K L G+ + ++++
Sbjct: 141 MDILAKAAFGMETSMLLGAQKPLSQAVKLMLEGITA-----SRNTLAKFLPGKRKQLREV 195
Query: 232 K-----------NLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFAS 280
+ + +Q RR ++ + D + + L+ E + LD A
Sbjct: 196 RESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGAQDDEGLLDNFVTFFIAG 255
Query: 281 FETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINE 340
ET++ + + LS P ++ +L E + ++ ++ L + + + Y Q + E
Sbjct: 256 HETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRY----LDFEDLGRLQYLSQVLKE 311
Query: 341 TARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGM 400
+ RL G FR + G +P ++ + + +EDPL FNP R+ G
Sbjct: 312 SLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRF-GP 370
Query: 401 ETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIRG 447
+ F G R C+G F ++++ V + L + ++ + G
Sbjct: 371 GAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPG 417
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A ETTS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGKQFALHEATLVLGMMLKHFDFE 424
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 123/298 (41%), Gaps = 30/298 (10%)
Query: 169 ATATMIFDLTAKKLISYDQEKSSENL---RENF-------VAFMEGLISFPLDIPGTAYH 218
A +I D+ +K Y+ EK + ENF + SF +PG+ +
Sbjct: 154 APCNVIADILFRKHFDYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPGS-HR 212
Query: 219 KCLQG----RERAMKKLKNLLQERRAN-PRKEQSDFYDYVLKELQKEGTILTEAIALDLM 273
K ++ +E +++K Q N PR D D +L E++KE +D +
Sbjct: 213 KVIKNVAEVKEYVSERVKEHHQSLDPNCPR----DLTDCLLVEMEKEKHSAERLYTMDGI 268
Query: 274 FV----LLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYK 329
V L FA ETTS + + L + P + ++L EE + ++ ++ +
Sbjct: 269 TVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIP----AIKDRQ 324
Query: 330 SMTYTFQFINETARLANIVPG-IFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYED 388
M Y ++E R +VP + +A RD F+GY IP G V+ +V + ++ D
Sbjct: 325 EMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPD 384
Query: 389 PLAFNPSRWKGMETNCA-SKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAI 445
P F P + S F F G R C G ++++ + L L + + +
Sbjct: 385 PEKFKPEHFLNENGKFKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPL 442
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A ETTS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A ETTS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A ETTS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 259 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 313
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 314 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 373
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 374 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A ETTS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A ETTS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 259 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 313
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 314 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 373
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 374 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A ETTS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A ETTS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A ETTS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 261 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 315
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 316 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 375
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 376 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A ETTS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A ETTS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 8/169 (4%)
Query: 277 LFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQ 336
L A ETTS ++ A+ FL +NP VL++ EE +L V ++++ K + Y
Sbjct: 262 LIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLKYVGM 316
Query: 337 FINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL-AFNP 394
+NE RL P A D G Y + G +MV P +H + + + D + F P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 395 SRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
R++ + F FG G R C+G F + + L L + ++
Sbjct: 377 ERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 9/200 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A E+TS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 258 IITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIRGGNI 450
F P R++ + F FG G R C+G F + + L L + ++ +
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
Query: 451 -VRTPGIQFPNGFHVRIIKK 469
++ + P GF V+ K
Sbjct: 432 DIKETQLLKPEGFVVKAKSK 451
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A ETTS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 261 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 315
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 316 YVGMVLNEALRLWPTSPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 375
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 376 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A ETTS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 259 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 313
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 314 YVGMVLNEALRLWPTAPPFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 373
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 374 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A ETTS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F +G G R C+G F + + L L + ++
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPYGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A E+TS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 258 IITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A E+TS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 259 IITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 313
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 314 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 373
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 374 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/405 (20%), Positives = 158/405 (39%), Gaps = 49/405 (12%)
Query: 69 IFRTSLVGRPVIISTDPDLNYFIFQQEGQLFQSWYPDTF-TEIFGRQNVGSLHGFMYRYL 127
+F S+ G+ V I DP + F ++ T T +FG G + Y +
Sbjct: 38 VFTISIGGQRVTIVGDPHEHSRFFSPRNEILSPREVYTIMTPVFGE---GVAYAAPYPRM 94
Query: 128 KNMVLNLFGPE----SLRKMLPEVEQVARARL-QQWSSQD-TVELKEATATMIFDLTAKK 181
+ LN E + +P ++ R + + W + + L E MI + +
Sbjct: 95 REQ-LNFLAEELTIAKFQNFVPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQC 153
Query: 182 LISYDQEK------------SSENLRENFVAFMEGLISFPLDIPGTAYHKCLQGRERAMK 229
L D K E+ FM L+ PL P +A +C + R K
Sbjct: 154 LFGEDLRKRLNARHFAQLLSKMESSLIPAAVFMPWLLRLPL--PQSA--RCREARAELQK 209
Query: 230 KLKNLLQERR---ANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSV 286
L ++ R A+ SD +LK + ++GT ++ ++ +FA T+++
Sbjct: 210 ILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTI 269
Query: 287 AITLAIKFLSENPLVLKQLTEEHEAILK-----NRENVHSGLTWREYKSMTYTFQFINET 341
+ ++ L +P K L + H+ I + N +NV M + + + E+
Sbjct: 270 TTSWSMLHLM-HPKNKKWLDKLHKEIDEFPAQLNYDNV--------MDEMPFAERCVRES 320
Query: 342 ARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGME 401
R + + R +++ Y +P G + P H + + +P ++P R + ++
Sbjct: 321 IRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDEKVD 380
Query: 402 TNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIR 446
F+ FG G+ C+G F +Q+ L +Y +Q +R
Sbjct: 381 GA-----FIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLLR 420
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/405 (20%), Positives = 158/405 (39%), Gaps = 49/405 (12%)
Query: 69 IFRTSLVGRPVIISTDPDLNYFIFQQEGQLFQSWYPDTF-TEIFGRQNVGSLHGFMYRYL 127
+F S+ G+ V I DP + F ++ T T +FG G + Y +
Sbjct: 53 VFTISIGGQRVTIVGDPHEHSRFFSPRNEILSPREVYTIMTPVFGE---GVAYAAPYPRM 109
Query: 128 KNMVLNLFGPE----SLRKMLPEVEQVARARL-QQWSSQD-TVELKEATATMIFDLTAKK 181
+ LN E + +P ++ R + + W + + L E MI + +
Sbjct: 110 REQ-LNFLAEELTIAKFQNFVPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQC 168
Query: 182 LISYDQEK------------SSENLRENFVAFMEGLISFPLDIPGTAYHKCLQGRERAMK 229
L D K E+ FM L+ PL P +A +C + R K
Sbjct: 169 LFGEDLRKRLNARHFAQLLSKMESSLIPAAVFMPWLLRLPL--PQSA--RCREARAELQK 224
Query: 230 KLKNLLQERR---ANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSV 286
L ++ R A+ SD +LK + ++GT ++ ++ +FA T+++
Sbjct: 225 ILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTI 284
Query: 287 AITLAIKFLSENPLVLKQLTEEHEAILK-----NRENVHSGLTWREYKSMTYTFQFINET 341
+ ++ L +P K L + H+ I + N +NV M + + + E+
Sbjct: 285 TTSWSMLHLM-HPKNKKWLDKLHKEIDEFPAQLNYDNV--------MDEMPFAERCVRES 335
Query: 342 ARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGME 401
R + + R +++ Y +P G + P H + + +P ++P R + ++
Sbjct: 336 IRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDEKVD 395
Query: 402 TNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIR 446
F+ FG G+ C+G F +Q+ L +Y +Q +R
Sbjct: 396 GA-----FIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLLR 435
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A ETTS ++ + FL +NP VL++ EE +L V ++++ K +
Sbjct: 264 IVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 318
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 319 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVE 378
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 379 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 430
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/405 (20%), Positives = 158/405 (39%), Gaps = 49/405 (12%)
Query: 69 IFRTSLVGRPVIISTDPDLNYFIFQQEGQLFQSWYPDTF-TEIFGRQNVGSLHGFMYRYL 127
+F S+ G+ V I DP + F ++ T T +FG G + Y +
Sbjct: 44 VFTISIGGQRVTIVGDPHEHSRFFSPRNEILSPREVYTIMTPVFGE---GVAYAAPYPRM 100
Query: 128 KNMVLNLFGPE----SLRKMLPEVEQVARARL-QQWSSQD-TVELKEATATMIFDLTAKK 181
+ LN E + +P ++ R + + W + + L E MI + +
Sbjct: 101 REQ-LNFLAEELTIAKFQNFVPAIQHEVRKFMAENWKEDEGVINLLEDCGAMIINTACQC 159
Query: 182 LISYDQEK------------SSENLRENFVAFMEGLISFPLDIPGTAYHKCLQGRERAMK 229
L D K E+ FM L+ PL P +A +C + R K
Sbjct: 160 LFGEDLRKRLNARHFAQLLSKMESSLIPAAVFMPWLLRLPL--PQSA--RCREARAELQK 215
Query: 230 KLKNLLQERR---ANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSV 286
L ++ R A+ SD +LK + ++GT ++ ++ +FA T+++
Sbjct: 216 ILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTI 275
Query: 287 AITLAIKFLSENPLVLKQLTEEHEAILK-----NRENVHSGLTWREYKSMTYTFQFINET 341
+ ++ L +P K L + H+ I + N +NV M + + + E+
Sbjct: 276 TTSWSMLHLM-HPKNKKWLDKLHKEIDEFPAQLNYDNV--------MDEMPFAERCVRES 326
Query: 342 ARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGME 401
R + + R +++ Y +P G + P H + + +P ++P R + ++
Sbjct: 327 IRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPERDEKVD 386
Query: 402 TNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIR 446
F+ FG G+ C+G F +Q+ L +Y +Q +R
Sbjct: 387 GA-----FIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLLR 426
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A E TS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 258 IITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPLA 391
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 392 -FNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A E TS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 258 IITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPLA 391
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 392 -FNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A E TS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 258 IITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPLA 391
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 392 -FNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A E TS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 258 IITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPLA 391
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 392 -FNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L ETTS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 258 IITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A ETTS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C G F + + L L + ++
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPFGNGQRACEGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L ETTS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 258 IITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A ETTS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 259 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 313
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 314 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 373
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C G F + + L L + ++
Sbjct: 374 EFRPERFEN-PSAIPQHAFKPFGNGQRACPGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L ETTS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 258 IITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L ETTS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 258 IITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L ETTS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 258 IITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 276 LLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTF 335
L FA ETTS + + + P V +++ E E ++ H + M YT
Sbjct: 276 LFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVI----GPHRPPELHDRAKMPYTE 331
Query: 336 QFINETARLANIVP-GIFRKALRDIQFKGYTIPAGWAV-MVCPPAVHLNPSKYEDPLAFN 393
I E R ++++P G+ + F+GY IP V ++ A+H +P +E P AFN
Sbjct: 332 AVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALH-DPHYFEKPDAFN 390
Query: 394 PSRWKGMETNCASKN---FMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQA-IRGGN 449
P + ++ N A K F+ F G R C+G + ++ +F L + + + +
Sbjct: 391 PDHF--LDANGALKKTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVAPED 448
Query: 450 IVRTP---GI-QFPNGFHVRIIKKDATH 473
I TP G+ + P + +R + + H
Sbjct: 449 IDLTPQECGVGKIPPTYQIRFLPRHHHH 476
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L ETTS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 258 IITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A ETTS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F +G G R C+G F + + L L + ++
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPWGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A ETTS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F G G R C+G F + + L L + ++
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPHGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 143/370 (38%), Gaps = 50/370 (13%)
Query: 88 NYFIFQQEGQLFQSWYPDTFT--------EIFGRQNV-GSLHGFMYRYLKNMVLNLFGPE 138
+YFI + + +PD FT E R V +HG + + +V+ F +
Sbjct: 76 SYFISRYHDVRYILQHPDIFTTKSLVERAEPVMRGPVLAQMHGKEHSAKRRIVVRSFIGD 135
Query: 139 SLRKMLPEVEQVARARLQQW---SSQDTVELKEATATMIFDLTAKKLISYDQEKSSENLR 195
+L + P ++Q A L + D V T + + L D EK SE
Sbjct: 136 ALDHLSPLIKQNAENLLAPYLERGKSDLVNDFGKTFAVCVTMDMLGLDKRDHEKISE--- 192
Query: 196 ENFVAFMEGLISFPLDIPGT--AYHKCLQGRERAMKKLKNLLQERRANPRKEQSDFYDYV 253
+ G+ F I + A L E+ + L +++ERR NP SD +
Sbjct: 193 -----WHSGVADFITSISQSPEARAHSLWCSEQLSQYLMPVIKERRVNP---GSDLIS-I 243
Query: 254 LKELQKEGTILTEAIALDLMFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAIL 313
L + EG L++ L L+ +L A+ E + L I L NP E+ +L
Sbjct: 244 LCTSEYEGMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNP-------EQMNDVL 296
Query: 314 KNRENVHSGLTWREYKSMTYTFQFINETARLANIVPGIFRKALRDIQFKGYTIPAGWAVM 373
+R V I ET R V I R+ +D G I V
Sbjct: 297 ADRSLVPRA---------------IAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVF 341
Query: 374 VCPPAVHLNPSKYEDPLAFNPSRWK-GMETN-CASKNFMAFGGGMRFCVGTDFTKVQMAV 431
A + +P +E P FN R G+++ + +AFG G+ CVGT F K ++ +
Sbjct: 342 CMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIEI 401
Query: 432 FLHCFLTKYR 441
+ L K R
Sbjct: 402 VANIVLDKMR 411
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 81/196 (41%), Gaps = 10/196 (5%)
Query: 276 LLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTF 335
L A+ ETT+ ++ + LS NP ++L +E +++L + + + + ++M Y
Sbjct: 291 LQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRA----EDLRNMPYLK 346
Query: 336 QFINETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPS 395
+ E+ RL VP R + Y +P G + + + + +ED F P
Sbjct: 347 ACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPE 406
Query: 396 RWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIRGGNI----- 450
RW E + FG G R C+G ++Q+ + L + KY A +
Sbjct: 407 RWLQKEKKINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEPVEMLHL 466
Query: 451 -VRTPGIQFPNGFHVR 465
+ P + P F R
Sbjct: 467 GILVPSRELPIAFRPR 482
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 114/262 (43%), Gaps = 19/262 (7%)
Query: 190 SSENLRENFVAFMEGLISFPLDIPGTAYHKCLQGRERAMKKLKNLLQERRANPRKEQSDF 249
S+ L E F + M+ L P + LQG E + K K +R +P + DF
Sbjct: 193 STGQLYEMFSSVMKHLPG-----PQQQAFQLLQGLEDFIAK-KVEHNQRTLDPNSPR-DF 245
Query: 250 YDYVLKELQKE-GTILTEAIALDLMFV---LLFASFETTSVAITLAIKFLSENPLVLKQL 305
D L +Q+E TE +L+ L ET S + L ++P V ++
Sbjct: 246 IDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKV 305
Query: 306 TEEHEAIL-KNRENVHSGLTWREYKSMTYTFQFINETARLANIVP-GIFRKALRDIQFKG 363
EE + ++ KNR+ + + M Y I+E R +++P + R+ +D +F+
Sbjct: 306 HEEIDRVIGKNRQP-----KFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRD 360
Query: 364 YTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNC-ASKNFMAFGGGMRFCVGT 422
+ +P G V +V +PS + +P FNP + + S F+ F G R C G
Sbjct: 361 FFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGE 420
Query: 423 DFTKVQMAVFLHCFLTKYRWQA 444
++++ +F + +R ++
Sbjct: 421 GLARMELFLFFTTVMQNFRLKS 442
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A ETTS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPL- 390
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F G G R C+G F + + L L + ++
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPAGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 114/262 (43%), Gaps = 19/262 (7%)
Query: 190 SSENLRENFVAFMEGLISFPLDIPGTAYHKCLQGRERAMKKLKNLLQERRANPRKEQSDF 249
S+ L E F + M+ L P + LQG E + K K +R +P + DF
Sbjct: 193 STGQLYEMFSSVMKHLPG-----PQQQAFQLLQGLEDFIAK-KVEHNQRTLDPNSPR-DF 245
Query: 250 YDYVLKELQKE-GTILTEAIALDLMFV---LLFASFETTSVAITLAIKFLSENPLVLKQL 305
D L +Q+E TE +L+ L ET S + L ++P V ++
Sbjct: 246 IDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKV 305
Query: 306 TEEHEAIL-KNRENVHSGLTWREYKSMTYTFQFINETARLANIVP-GIFRKALRDIQFKG 363
EE + ++ KNR+ + + M Y I+E R +++P + R+ +D +F+
Sbjct: 306 HEEIDRVIGKNRQP-----KFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRD 360
Query: 364 YTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNC-ASKNFMAFGGGMRFCVGT 422
+ +P G V +V +PS + +P FNP + + S F+ F G R C G
Sbjct: 361 FFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGE 420
Query: 423 DFTKVQMAVFLHCFLTKYRWQA 444
++++ +F + +R ++
Sbjct: 421 GLARMELFLFFTTVMQNFRLKS 442
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 9/200 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A E TS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 259 IITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 313
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPLA 391
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 314 YVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 373
Query: 392 -FNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIRGGNI 450
F P R++ + F FG G R C+G F + + L L + ++ +
Sbjct: 374 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 432
Query: 451 -VRTPGIQFPNGFHVRIIKK 469
++ + P GF V+ K
Sbjct: 433 DIKETLVLKPEGFVVKAKSK 452
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 9/200 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A E TS ++ A+ FL +NP VL++ EE +L V ++++ K +
Sbjct: 258 IITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPLA 391
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 392 -FNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIRGGNI 450
F P R++ + F FG G R C+G F + + L L + ++ +
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYEL 431
Query: 451 -VRTPGIQFPNGFHVRIIKK 469
++ + P GF V+ K
Sbjct: 432 DIKETLVLKPEGFVVKAKSK 451
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 114/262 (43%), Gaps = 19/262 (7%)
Query: 190 SSENLRENFVAFMEGLISFPLDIPGTAYHKCLQGRERAMKKLKNLLQERRANPRKEQSDF 249
S+ L E F + M+ L P + LQG E + K K +R +P + DF
Sbjct: 193 STGQLYEMFSSVMKHLPG-----PQQQAFQLLQGLEDFIAK-KVEHNQRTLDPNSPR-DF 245
Query: 250 YDYVLKELQKE-GTILTEAIALDLMFV---LLFASFETTSVAITLAIKFLSENPLVLKQL 305
D L +Q+E TE +L+ L ET S + L ++P V ++
Sbjct: 246 IDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAKV 305
Query: 306 TEEHEAIL-KNRENVHSGLTWREYKSMTYTFQFINETARLANIVP-GIFRKALRDIQFKG 363
EE + ++ KNR+ + + M Y I+E R +++P + R+ +D +F+
Sbjct: 306 HEEIDRVIGKNRQP-----KFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRD 360
Query: 364 YTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNC-ASKNFMAFGGGMRFCVGT 422
+ +P G V +V +PS + +P FNP + + S F+ F G R C G
Sbjct: 361 FFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGE 420
Query: 423 DFTKVQMAVFLHCFLTKYRWQA 444
++++ +F + +R ++
Sbjct: 421 GLARMELFLFFTTVMQNFRLKS 442
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%)
Query: 338 INETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRW 397
I ET RL I + R + D+ + Y IPA V V A+ P+ + DP F+P+RW
Sbjct: 341 IKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRW 400
Query: 398 KGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYR 441
+ N + FG G+R C+G +++M +FL L +R
Sbjct: 401 LSKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFR 444
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%)
Query: 338 INETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRW 397
I ET RL I + R + D+ + Y IPA V V A+ P+ + DP F+P+RW
Sbjct: 338 IKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRW 397
Query: 398 KGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYR 441
+ N + FG G+R C+G +++M +FL L +R
Sbjct: 398 LSKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFR 441
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 92/423 (21%), Positives = 174/423 (41%), Gaps = 49/423 (11%)
Query: 64 KSYGPIFRTSLVGRPVIISTDPDLNYFIFQQEGQLFQSWYPDTFT-------EIFGRQNV 116
+ YGPI+R L + P+ +F+ EG YP+ + + ++ +
Sbjct: 45 QKYGPIYREKLGNLESVYIIHPEDVAHLFKFEGS-----YPERYDIPPWLAYHRYYQKPI 99
Query: 117 GSLHGFMYRYLKN-MVLN--LFGPESLRKMLPEVEQVAR-------ARLQQWSSQDTV-E 165
G L + K+ +VLN + PE+++ +P + V++ R++Q S V +
Sbjct: 100 GVLFKKSGTWKKDRVVLNTEVMAPEAIKNFIPLLNPVSQDFVSLLHKRIKQQGSGKFVGD 159
Query: 166 LKEATATMIFDLTAKKLISYDQEKSSENLRENFVAFMEGL-----ISFP-LDIPGTAYH- 218
+KE F+ + E + F++ + S P L++P Y
Sbjct: 160 IKEDLFHFAFESITNVMFGERLGMLEETVNPEAQKFIDAVYKMFHTSVPLLNVPPELYRL 219
Query: 219 -KCLQGRE----------RAMKKLKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEA 267
+ R+ +A K + Q+ R RK + Y +L L K +L E
Sbjct: 220 FRTKTWRDHVAAWDTIFNKAEKYTEIFYQDLR---RKTEFRNYPGILYCLLKSEKMLLED 276
Query: 268 IALDLMFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWRE 327
+ ++ +L TTS+ + + ++ + V + L EE +L R ++ +
Sbjct: 277 VKANIT-EMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREE---VLNARRQAEGDIS-KM 331
Query: 328 YKSMTYTFQFINETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYE 387
+ + I ET RL I + R D+ + Y IPA V V A+ +P+ +
Sbjct: 332 LQMVPLLKASIKETLRLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFS 391
Query: 388 DPLAFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIRG 447
P F+P+RW + + + FG G+R CVG +++M +FL L ++ +
Sbjct: 392 SPDKFDPTRWLSKDKDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVEMQHI 451
Query: 448 GNI 450
G++
Sbjct: 452 GDV 454
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A E TS ++ A+ FL +NP L++ EE +L V ++++ K +
Sbjct: 258 IITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVL-----VDPVPSYKQVKQLK 312
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPLA 391
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 313 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVE 372
Query: 392 -FNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 373 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 8/173 (4%)
Query: 273 MFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMT 332
+ L A E TS ++ A+ FL +NP L++ EE +L + H ++ K +
Sbjct: 259 IITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVPSH-----KQVKQLK 313
Query: 333 YTFQFINETARLANIVPGIFRKALRDIQFKG-YTIPAGWAVMVCPPAVHLNPSKYEDPLA 391
Y +NE RL P A D G Y + G +MV P +H + + + D +
Sbjct: 314 YVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVE 373
Query: 392 -FNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
F P R++ + F FG G R C+G F + + L L + ++
Sbjct: 374 EFRPERFEN-PSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 47/228 (20%)
Query: 231 LKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAITL 290
L L+ ++A P + D ++ +EG + + + + + VLL A ETT AI L
Sbjct: 199 LHGLVGRKQAEP---EDGLLDELIARQLEEGDLDHDEVVM-IALVLLVAGHETTVNAIAL 254
Query: 291 AIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVPG 350
L ++P E+ + +L++ V SG+ + E R ++
Sbjct: 255 GALTLIQHP-------EQIDVLLRDPGAV-SGV--------------VEELLRFTSVSDH 292
Query: 351 IFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNFM 410
I R A DI+ G TI AG AV+V ++ + YE+P F+ R +++ +
Sbjct: 293 IVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARR--------NARHHV 344
Query: 411 AFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIRGGNIVRTPGIQF 458
FG G+ C+G + + ++ + L GG R PG++
Sbjct: 345 GFGHGIHQCLGQNLARAELEIAL-------------GGLFARIPGLRL 379
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 157/392 (40%), Gaps = 26/392 (6%)
Query: 67 GPIFRTSLVGRPVIISTDPDLNYFIFQQ-EGQLFQSWYPDTFTEIFGRQNVGSLHGFMYR 125
G + L G+ V++ + N F F+ + L Q+ T IFG G +
Sbjct: 38 GDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIFGE---GVVFDASPE 94
Query: 126 YLKNMVLN--LFGPESLRKMLPEVEQVARARLQQWSSQDTVELKEATATMIFDLTAKKLI 183
K M+ N L G E ++ +E R + W ++L + A + ++ LI
Sbjct: 95 RRKEMLHNAALRG-EQMKGHAATIEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSATLI 153
Query: 184 SYDQEKSSENLRENFVAFMEGLI--SFPLD-----IPGTAYHKCLQGRERAMKKLKNLLQ 236
+K + L F L + PL +P ++ + + R + + +++
Sbjct: 154 G---KKFRDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEARNGLVALVADIMN 210
Query: 237 ERRANPRKEQSD--FYDYVLKELQKEGTILTEAIALDLMFV-LLFASFETTSVAITLAIK 293
R ANP ++SD D ++ + GT A + MF+ ++FA T+S + +
Sbjct: 211 GRIANPPTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLI 270
Query: 294 FLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVPGIFR 353
L + + +E + + + +V ++ + + + ET RL + + R
Sbjct: 271 ELMRHRDAYAAVIDELDELYGDGRSV----SFHALRQIPQLENVLKETLRLHPPLIILMR 326
Query: 354 KALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKG--METNCASKNFMA 411
A + + +G+ I G V P + P + DP F P+R++ E ++
Sbjct: 327 VAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIP 386
Query: 412 FGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
FG G CVG F +Q+ L +Y ++
Sbjct: 387 FGAGRHRCVGAAFAIMQIKAIFSVLLREYEFE 418
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 160/431 (37%), Gaps = 54/431 (12%)
Query: 44 LQFFAPNTSSDIPPFIKNRMKSYGPIFRTSLVGRPVIISTDPDL---NYFIFQQEGQLFQ 100
L F PN S D P + R KS+ I RT L + + L I G +
Sbjct: 17 LDFTDPNFSWDSPEVAEAREKSW--IARTPLALLVLRYAEADQLARDKRLISGFRGLVDM 74
Query: 101 SWYPDTFTEIFGRQNVGSLHGFMYRYLKNMVLNLFGPESLRKMLPEVEQVARARLQQWSS 160
P+ F + SL G +R L+ + + F P + + P V + +
Sbjct: 75 VGTPEGPVRDFMVDFLQSLDGADHRRLRGLATHPFTPRRITAVQPFVRSTVEQLIDKLPQ 134
Query: 161 QDTVELKEATATMIFDLTAKKLISYDQEKSSENLRENFVAFMEGLISFPLDIPGTAYHKC 220
D + + A + L +L+ + E R + + +S DI K
Sbjct: 135 GD-FDFVQHFAHPLPALVMCQLLGFPLEDYDTVGRLSIETNLGLALSNDQDI----LVKV 189
Query: 221 LQGRERAMKKLKNLLQERRANPRKE-QSD----FYDYVLKELQKEGTILTEAIALDLMFV 275
QG R L +++R+ P + SD F+D VL + + + T
Sbjct: 190 EQGLGRMFDYLVAAIEKRKVEPGDDLTSDIVRAFHDGVLDDYELRTLVAT---------- 239
Query: 276 LLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTF 335
+L A +ETT+ + LA+ +++P ++ E E + E V L W +T T
Sbjct: 240 VLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPELAPQAVEEV---LRWSPTLPVTAT- 295
Query: 336 QFINETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPS 395
R A D + G IP G V +C H +P + D F+ +
Sbjct: 296 -----------------RVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDIT 338
Query: 396 RWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIRGGNIVRTP- 454
+ + +AFGGG FC+GT ++++ + T+ I G R
Sbjct: 339 VKREAPS-------IAFGGGPHFCLGTALARLELTEAVAALATRLDPPQIAGEITWRHEL 391
Query: 455 GIQFPNGFHVR 465
G+ P+ +R
Sbjct: 392 GVAGPDALPLR 402
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 169/438 (38%), Gaps = 68/438 (15%)
Query: 58 FIKNRMKSYGPIFRTSLVGRPVIISTDPDLNYFIFQQEGQLF--QSWYPDTFTEIFGRQN 115
F++ + +G +F L+G+ V T+P L+Y G+ F + ++ T + FG ++
Sbjct: 38 FLRANQRKHGHVFTCKLMGKYVHFITNP-LSYHKVLCHGKYFDWKKFHFATSAKAFGHRS 96
Query: 116 VGSLHGFMYRYLKNMVLNLFGPESL----RKMLPEVEQVAR------ARLQQWSSQDTVE 165
+ + G + + + +L M+ ++++ R ++ W ++
Sbjct: 97 IDPMDGNTTENINDTFIKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYS 156
Query: 166 -----LKEATATMIFDLTAKKLISYDQEKSSENLRENFVAFMEGLISFPLDIPGTAYHKC 220
+ EA IF + L D +K+ ++ N F + FP + G H
Sbjct: 157 FCYRVMFEAGYLTIF---GRDLTRRDTQKA--HILNNLDNFKQFDKVFPALVAGLPIH-M 210
Query: 221 LQGRERAMKKLKNLLQERRANPRKEQSDFYDY---------VLKELQKEGTILTEAIALD 271
+ A +KL L+ R+ S+ +L+K T L
Sbjct: 211 FRTAHNAREKLAESLRHENLQKRESISELISLRMFLNDTLSTFDDLEKAKTHL------- 263
Query: 272 LMFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNR------ENVHSGLTW 325
V+L+AS T A ++ + NP +K TEE + L+N E L+
Sbjct: 264 ---VVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQ 320
Query: 326 REYKSMTYTFQFINETARLANIVPGIFRKALRD----IQFKGYTIPAGWAVMVCPPAVHL 381
E + I E+ RL++ I R A D ++ Y I + + P +HL
Sbjct: 321 AELNDLPVLDSIIKESLRLSSASLNI-RTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHL 379
Query: 382 NPSKYEDPLAFNPSRWKGMETNCASKN------------FMAFGGGMRFCVGTDFTKVQM 429
+P Y DPL F R+ ++ N +K +M FG G C G F ++
Sbjct: 380 DPEIYPDPLTFKYDRY--LDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEI 437
Query: 430 AVFLHCFLTKYRWQAIRG 447
FL L+ + + I G
Sbjct: 438 KQFLILMLSYFELELIEG 455
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 157/392 (40%), Gaps = 26/392 (6%)
Query: 67 GPIFRTSLVGRPVIISTDPDLNYFIFQQ-EGQLFQSWYPDTFTEIFGRQNVGSLHGFMYR 125
G + L G+ V++ + N F F+ + L Q+ T IFG G +
Sbjct: 38 GDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIFGE---GVVFDASPE 94
Query: 126 YLKNMVLN--LFGPESLRKMLPEVEQVARARLQQWSSQDTVELKEATATMIFDLTAKKLI 183
K M+ N L G E ++ +E R + W ++L + A + ++ LI
Sbjct: 95 RRKEMLHNAALRG-EQMKGHAATIEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLI 153
Query: 184 SYDQEKSSENLRENFVAFMEGLI--SFPLD-----IPGTAYHKCLQGRERAMKKLKNLLQ 236
+K + L F L + PL +P ++ + + R + + +++
Sbjct: 154 G---KKFRDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEARNGLVALVADIMN 210
Query: 237 ERRANPRKEQSD--FYDYVLKELQKEGTILTEAIALDLMFV-LLFASFETTSVAITLAIK 293
R ANP ++SD D ++ + GT A + MF+ ++FA T+S + +
Sbjct: 211 GRIANPPTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLI 270
Query: 294 FLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVPGIFR 353
L + + +E + + + +V ++ + + + ET RL + + R
Sbjct: 271 ELMRHRDAYAAVIDELDELYGDGRSV----SFHALRQIPQLENVLKETLRLHPPLIILMR 326
Query: 354 KALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKG--METNCASKNFMA 411
A + + +G+ I G V P + P + DP F P+R++ E ++
Sbjct: 327 VAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIP 386
Query: 412 FGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
FG G CVG F +Q+ L +Y ++
Sbjct: 387 FGAGRHRCVGAAFAIMQIKAIFSVLLREYEFE 418
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 157/392 (40%), Gaps = 26/392 (6%)
Query: 67 GPIFRTSLVGRPVIISTDPDLNYFIFQQ-EGQLFQSWYPDTFTEIFGRQNVGSLHGFMYR 125
G + L G+ V++ + N F F+ + L Q+ T IFG G +
Sbjct: 38 GDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIFGE---GVVFDASPE 94
Query: 126 YLKNMVLN--LFGPESLRKMLPEVEQVARARLQQWSSQDTVELKEATATMIFDLTAKKLI 183
K M+ N L G E ++ +E R + W ++L + A + ++ LI
Sbjct: 95 RRKEMLHNAALRG-EQMKGHAATIEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLI 153
Query: 184 SYDQEKSSENLRENFVAFMEGLI--SFPLD-----IPGTAYHKCLQGRERAMKKLKNLLQ 236
+K + L F L + PL +P ++ + + R + + +++
Sbjct: 154 G---KKFRDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEARNGLVALVADIMN 210
Query: 237 ERRANPRKEQSD--FYDYVLKELQKEGTILTEAIALDLMFV-LLFASFETTSVAITLAIK 293
R ANP ++SD D ++ + GT A + MF+ ++FA T+S + +
Sbjct: 211 GRIANPPTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLI 270
Query: 294 FLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVPGIFR 353
L + + +E + + + +V ++ + + + ET RL + + R
Sbjct: 271 ELMRHRDAYAAVIDELDELYGDGRSV----SFHALRQIPQLENVLKETLRLHPPLIILMR 326
Query: 354 KALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKG--METNCASKNFMA 411
A + + +G+ I G V P + P + DP F P+R++ E ++
Sbjct: 327 VAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIP 386
Query: 412 FGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
FG G CVG F +Q+ L +Y ++
Sbjct: 387 FGAGRHRCVGAAFAIMQIKAIFSVLLREYEFE 418
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 137/334 (41%), Gaps = 87/334 (26%)
Query: 128 KNMVLNLFGPESLRKMLPEVEQVARARLQQW-SSQDTVELKEATA----TMI-------- 174
+ M ++ F + ++ M PEVE+V L + ++ T +L A +M+
Sbjct: 107 RRMTISEFTVKRIKGMRPEVEEVVHGFLDEMLAAGPTADLVSQFALPVPSMVICRLLGVP 166
Query: 175 ------FDLTAKKLISYDQEKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQGRERAM 228
F +K+L+ +S+ R + +++GLI+ PG
Sbjct: 167 YADHEFFQDASKRLVQSTDAQSALTARNDLAGYLDGLITQFQTEPGAGL----------- 215
Query: 229 KKLKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAI 288
+ L+ ++ AN E+ +E I T +LL A ETT+
Sbjct: 216 --VGALVADQLAN-------------GEIDREELIST-------AMLLLIAGHETTASMT 253
Query: 289 TLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETAR---LA 345
+L++ L ++P E++ A+ +R V + E R +A
Sbjct: 254 SLSVITLLDHP-------EQYAALRADRSLVPGA---------------VEELLRYLAIA 291
Query: 346 NIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCA 405
+I G R A DI+ +G I AG V+V + + + YEDP A + R +
Sbjct: 292 DIAGG--RVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHR--------S 341
Query: 406 SKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
+++ +AFG G+ C+G + ++++ V L+ + +
Sbjct: 342 ARHHLAFGFGVHQCLGQNLARLELEVILNALMDR 375
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 137/334 (41%), Gaps = 87/334 (26%)
Query: 128 KNMVLNLFGPESLRKMLPEVEQVARARLQQW-SSQDTVELKEATA----TMI-------- 174
+ M ++ F + ++ M PEVE+V L + ++ T +L A +M+
Sbjct: 107 RRMTISEFTVKRIKGMRPEVEEVVHGFLDEMLAAGPTADLVSQFALPVPSMVICRLLGVP 166
Query: 175 ------FDLTAKKLISYDQEKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQGRERAM 228
F +K+L+ +S+ R + +++GLI+ PG
Sbjct: 167 YADHEFFQDASKRLVQSTDAQSALTARNDLAGYLDGLITQFQTEPGAGL----------- 215
Query: 229 KKLKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAI 288
+ L+ ++ AN E+ +E I T +LL A ETT+
Sbjct: 216 --VGALVADQLAN-------------GEIDREELIST-------AMLLLIAGHETTASMT 253
Query: 289 TLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETAR---LA 345
+L++ L ++P E++ A+ +R V + E R +A
Sbjct: 254 SLSVITLLDHP-------EQYAALRADRSLVPGA---------------VEELLRYLAIA 291
Query: 346 NIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCA 405
+I G R A DI+ +G I AG V+V + + + YEDP A + R +
Sbjct: 292 DIAGG--RVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHR--------S 341
Query: 406 SKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
+++ +AFG G+ C+G + ++++ V L+ + +
Sbjct: 342 ARHHLAFGFGVHQCLGQNLARLELEVILNALMDR 375
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 137/334 (41%), Gaps = 87/334 (26%)
Query: 128 KNMVLNLFGPESLRKMLPEVEQVARARLQQW-SSQDTVELKEATA----TMI-------- 174
+ M ++ F + ++ M PEVE+V L + ++ T +L A +M+
Sbjct: 107 RRMTISEFTVKRIKGMRPEVEEVVHGFLDEMLAAGPTADLVSQFALPVPSMVICRLLGVP 166
Query: 175 ------FDLTAKKLISYDQEKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQGRERAM 228
F +K+L+ +S+ R + +++GLI+ PG
Sbjct: 167 YADHEFFQDASKRLVQSTDAQSALTARNDLAGYLDGLITQFQTEPGAGL----------- 215
Query: 229 KKLKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAI 288
+ L+ ++ AN E+ +E I T +LL A ETT+
Sbjct: 216 --VGALVADQLAN-------------GEIDREELIST-------AMLLLIAGHETTASMT 253
Query: 289 TLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETAR---LA 345
+L++ L ++P E++ A+ +R V + E R +A
Sbjct: 254 SLSVITLLDHP-------EQYAALRADRSLVPGA---------------VEELLRYLAIA 291
Query: 346 NIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCA 405
+I G R A DI+ +G I AG V+V + + + YEDP A + R +
Sbjct: 292 DIAGG--RVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHR--------S 341
Query: 406 SKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
+++ +AFG G+ C+G + ++++ V L+ + +
Sbjct: 342 ARHHLAFGFGVHQCLGQNLARLELEVILNALMDR 375
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 137/334 (41%), Gaps = 87/334 (26%)
Query: 128 KNMVLNLFGPESLRKMLPEVEQVARARLQQW-SSQDTVELKEATA----TMI-------- 174
+ M ++ F + ++ M PEVE+V L + ++ T +L A +M+
Sbjct: 107 RRMTISEFTVKRIKGMRPEVEEVVHGFLDEMLAAGPTADLVSQFALPVPSMVICRLLGVP 166
Query: 175 ------FDLTAKKLISYDQEKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQGRERAM 228
F +K+L+ +S+ R + +++GLI+ PG
Sbjct: 167 YADHEFFQDASKRLVQSTDAQSALTARNDLAGYLDGLITQFQTEPGAGL----------- 215
Query: 229 KKLKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAI 288
+ L+ ++ AN E+ +E I T +LL A ETT+
Sbjct: 216 --VGALVADQLAN-------------GEIDREELIST-------AMLLLIAGHETTASMT 253
Query: 289 TLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETAR---LA 345
+L++ L ++P E++ A+ +R V + E R +A
Sbjct: 254 SLSVITLLDHP-------EQYAALRADRSLVPGA---------------VEELLRYLAIA 291
Query: 346 NIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCA 405
+I G R A DI+ +G I AG V+V + + + YEDP A + R +
Sbjct: 292 DIAGG--RVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHR--------S 341
Query: 406 SKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
+++ +AFG G+ C+G + ++++ V L+ + +
Sbjct: 342 ARHHLAFGFGVHQCLGQNLARLELEVILNALMDR 375
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 129/347 (37%), Gaps = 51/347 (14%)
Query: 110 IFGRQNVGSLHGFMYRYLKNMVLNLFGPESLRKMLPEVEQVARARLQQWSSQDTV----E 165
+FG+ V L G +R+ K M + L PE +R + E R + W+ + + E
Sbjct: 77 LFGQGGVQGLDGETHRHRKQMFMGLMTPERVRALAQLFEAEWRRAVPGWTRKGEIVFYDE 136
Query: 166 LKEATATMIFDLTAKKLISYDQEKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ--- 222
L E + L + + LR F D G+A + L
Sbjct: 137 LHEPLTRAVCAWAGVPLPDDEAGNRAGELRALF------------DAAGSASPRHLWSRL 184
Query: 223 GRERAMKKLKNLLQERRANPRKEQSDFYDYVLK-ELQKEGTILTEAIA-LDLMFVLLFAS 280
R R K +++ RA S Y + + +L+ +A ++L+ VL
Sbjct: 185 ARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVL---- 240
Query: 281 FETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINE 340
+VAI + I F++ L+ + + L + Y F+ E
Sbjct: 241 --RPTVAIAVYITFVAH--------------ALQTCSGIRAALV----QQPDYAELFVQE 280
Query: 341 TARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGM 400
R P + +A +D +++G P G V++ + + + + DP F P R++
Sbjct: 281 VRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAW 340
Query: 401 ETNCASKNFMAFGGGMRF----CVGTDFTKVQMAVFLHCFLTKYRWQ 443
+ + S NF+ GGG + C G M V H + R+
Sbjct: 341 DED--SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYD 385
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 154/391 (39%), Gaps = 24/391 (6%)
Query: 67 GPIFRTSLVGRPVIISTDPDLNYFIFQQ-EGQLFQSWYPDTFTEIFGRQNVGSLHGFMYR 125
G + L G+ V++ + N F F+ + L Q+ T IFG V +
Sbjct: 38 GDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIFGEAVVFDASPERRK 97
Query: 126 -YLKNMVLNLFGPESLRKMLPEVEQVARARLQQWSSQDTVELKEATATMIFDLTAKKLIS 184
L N L E ++ +E R + W ++L + A + ++ LI
Sbjct: 98 EMLHNAALR---GEQMKGHAATIEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLIG 154
Query: 185 YDQEKSSENLRENFVAFMEGLI--SFPLD-----IPGTAYHKCLQGRERAMKKLKNLLQE 237
+K + L F L + PL +P ++ + + R + + +++
Sbjct: 155 ---KKFRDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNG 211
Query: 238 RRANPRKEQSD--FYDYVLKELQKEGTILTEAIALDLMFV-LLFASFETTSVAITLAIKF 294
R ANP ++SD D ++ + GT A + MF+ ++FA T+S + +
Sbjct: 212 RIANPPTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIE 271
Query: 295 LSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVPGIFRK 354
L + + +E + + + +V ++ + + + ET RL + + R
Sbjct: 272 LMRHRDAYAAVIDELDELYGDGRSV----SFHALRQIPQLENVLKETLRLHPPLIILMRV 327
Query: 355 ALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKG--METNCASKNFMAF 412
A + + +G+ I G V P + P + DP F P+R++ E ++ F
Sbjct: 328 AKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPF 387
Query: 413 GGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
G G CVG F +Q+ L +Y ++
Sbjct: 388 GAGRHRCVGAAFAIMQIKAIFSVLLREYEFE 418
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 159/431 (36%), Gaps = 54/431 (12%)
Query: 44 LQFFAPNTSSDIPPFIKNRMKSYGPIFRTSLVGRPVIISTDPDL---NYFIFQQEGQLFQ 100
L F PN S D P + R KS+ I RT L + + L I G +
Sbjct: 27 LDFTDPNFSWDSPEVAEAREKSW--IARTPLALLVLRYAEADQLARDKRLISGFRGLVDM 84
Query: 101 SWYPDTFTEIFGRQNVGSLHGFMYRYLKNMVLNLFGPESLRKMLPEVEQVARARLQQWSS 160
P+ F + SL G +R L+ + + F P + + P V + +
Sbjct: 85 VGTPEGPVRDFMVDFLQSLDGADHRRLRGLATHPFTPRRITAVQPFVRSTVEQLIDKLPQ 144
Query: 161 QDTVELKEATATMIFDLTAKKLISYDQEKSSENLRENFVAFMEGLISFPLDIPGTAYHKC 220
D + + + L +L+ + E R + + +S DI K
Sbjct: 145 GD-FDFVQHFPHPLPALVMCQLLGFPLEDYDTVGRLSIETNLGLALSNDQDI----LVKV 199
Query: 221 LQGRERAMKKLKNLLQERRANPRKE-QSD----FYDYVLKELQKEGTILTEAIALDLMFV 275
QG R L +++R+ P + SD F+D VL + + + T
Sbjct: 200 EQGLGRMFDYLVAAIEKRKVEPGDDLTSDIVRAFHDGVLDDYELRTLVAT---------- 249
Query: 276 LLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTF 335
+L A +ETT+ + LA+ +++P ++ E E + E V L W +T T
Sbjct: 250 VLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPELAPQAVEEV---LRWSPTLPVTAT- 305
Query: 336 QFINETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPS 395
R A D + G IP G V +C H +P + D F+ +
Sbjct: 306 -----------------RVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDIT 348
Query: 396 RWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIRGGNIVRTP- 454
+ + +AFGGG FC+GT ++++ + T+ I G R
Sbjct: 349 VKREAPS-------IAFGGGPHFCLGTALARLELTEAVAALATRLDPPQIAGEITWRHEL 401
Query: 455 GIQFPNGFHVR 465
G+ P+ +R
Sbjct: 402 GVAGPDALPLR 412
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 139/363 (38%), Gaps = 50/363 (13%)
Query: 81 ISTDPDLNYFIFQQEGQLFQSW--YPDTFTEIFGRQNVGSLHGFMYRYLKNMVLNLFGPE 138
+S+DP Y + E F ++ +P+ F N+G+ + L+ +V F
Sbjct: 57 LSSDPKKKYPGVEVE---FPAYLGFPEDVRNYFA-TNMGTSDPPTHTRLRKLVSQEFTVR 112
Query: 139 SLRKMLPEVEQVARARLQQWSSQDTVELKEATATMIFDLTAKKLISYDQEKSSENLR-EN 197
+ M P VEQ+ L + V++ + A + +L+ D++ E R +
Sbjct: 113 RVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAHPLPIKVICELLGVDEKYRGEFGRWSS 172
Query: 198 FVAFMEGLISFPLDIPGTAYHKCLQGRERAMKKLKNLLQERRANPRKEQSDFYDYVLKEL 257
+ M+ P A + RE + + +L++ RR P D +++
Sbjct: 173 EILVMD---------PERAEQRGQAARE-VVNFILDLVERRRTEP---GDDLLSALIRVQ 219
Query: 258 QKEGTILTEAIALDLMFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRE 317
+ L+ + VLL A FET+ I + L +P L + + A+ E
Sbjct: 220 DDDDGRLSADELTSIALVLLLAGFETSVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVE 279
Query: 318 NVHSGLTWREYKSMTYTFQFINETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPP 377
+ R T +F E +++ G IP V+V
Sbjct: 280 EI-----LRYIAPPETTTRFAAE-----------------EVEIGGVAIPQYSTVLVANG 317
Query: 378 AVHLNPSKYEDPLAFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFL 437
A + +P ++ DP F+ +R ++ ++FG G+ FC+G K++ V L
Sbjct: 318 AANRDPKQFPDPHRFDVTR--------DTRGHLSFGQGIHFCMGRPLAKLEGEVALRALF 369
Query: 438 TKY 440
++
Sbjct: 370 GRF 372
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 98/225 (43%), Gaps = 39/225 (17%)
Query: 220 CLQGRERAMKKLK----NLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFV 275
++ R RA +L+ +L+ + + P D + + ++EGT L A + L F+
Sbjct: 186 SMEDRRRAFAELRAYIDDLITRKESEP---GDDLFSRQIARQRQEGT-LDHAGLVSLAFL 241
Query: 276 LLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTF 335
LL A ETT+ I+L + L +P +QLT ++K T
Sbjct: 242 LLTAGHETTANMISLGVVGLLSHP---EQLT-----VVKANPG--------------RTP 279
Query: 336 QFINETARLANIVPGIF-RKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNP 394
+ E R I G+ R A D++ G +I AG V+V + + +P+ ++DP +
Sbjct: 280 MAVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDV 339
Query: 395 SRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
R +++ +AFG G C+G + ++++ + +
Sbjct: 340 ER--------GARHHLAFGFGPHQCLGQNLARMELQIVFDTLFRR 376
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 95/439 (21%), Positives = 167/439 (38%), Gaps = 70/439 (15%)
Query: 58 FIKNRMKSYGPIFRTSLVGRPVIISTDPDLNYFIFQQEGQLFQSWYPDTFT---EIFGRQ 114
F++ + +G +F L+G+ V T+P L+Y G+ F W F + FG +
Sbjct: 38 FLRANQRKHGHVFTCKLMGKYVHFITNP-LSYHKVLCHGKYF-DWKKFHFALSAKAFGHR 95
Query: 115 NVGSLHGFMYRYLKNMVLNLFGPESL----RKMLPEVEQVAR------ARLQQWSSQDTV 164
++ + G + + + +L M+ ++++ R ++ W ++
Sbjct: 96 SIDPMDGNTTENINDTFIKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMY 155
Query: 165 E-----LKEATATMIFDLTAKKLISYDQEKSSENLRENFVAFMEGLISFPLDIPGTAYHK 219
+ EA IF + L D +K+ ++ N F + FP + G H
Sbjct: 156 SFCYRVMFEAGYLTIF---GRDLTRRDTQKA--HILNNLDNFKQFDKVFPALVAGLPIH- 209
Query: 220 CLQGRERAMKKLKNLLQERRANPRKEQSDFYDY---------VLKELQKEGTILTEAIAL 270
+ A +KL L+ R+ S+ +L+K T L
Sbjct: 210 MFRTAHNAREKLAESLRHENLQKRESISELISLRMFLNDTLSTFDDLEKAKTHL------ 263
Query: 271 DLMFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNR------ENVHSGLT 324
V+L+AS T A ++ + NP +K TEE + L+N E L+
Sbjct: 264 ----VVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLS 319
Query: 325 WREYKSMTYTFQFINETARLANIVPGIFRKALRD----IQFKGYTIPAGWAVMVCPPAVH 380
E + I E+ RL++ I R A D ++ Y I + + P +H
Sbjct: 320 QAELNDLPVLDSIIKESLRLSSASLNI-RTAKEDFTLHLEDGSYNIRKDDIIALYPQLMH 378
Query: 381 LNPSKYEDPLAFNPSRWKGMETNCASKN------------FMAFGGGMRFCVGTDFTKVQ 428
L+P Y DPL F R+ ++ N +K +M FG G C G F +
Sbjct: 379 LDPEIYPDPLTFKYDRY--LDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHE 436
Query: 429 MAVFLHCFLTKYRWQAIRG 447
+ FL L+ + + I G
Sbjct: 437 IKQFLILMLSYFELELIEG 455
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 86/215 (40%), Gaps = 32/215 (14%)
Query: 225 ERAMKKLKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETT 284
E+A + +L+ RR KE +D L + + + L+E LDL LL A +E+T
Sbjct: 204 EQAYAYMGDLIDRRR----KEPTDDLVSALVQARDQQDSLSEQELLDLAIGLLVAGYEST 259
Query: 285 SVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARL 344
+ I + L P + +QL + E I E + W T
Sbjct: 260 TTQIADFVYLLMTRPELRRQLLDRPELIPSAVEELTR---WVPLGVGT------------ 304
Query: 345 ANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNC 404
+ R A+ D+ +G TI AG V+ A + + +++ D ++ +
Sbjct: 305 -----AVPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPD--------ADRIDVDR 351
Query: 405 ASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
+ FG G+ C+G +V++ V L L +
Sbjct: 352 TPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQR 386
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 79/210 (37%), Gaps = 34/210 (16%)
Query: 231 LKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAITL 290
L L+ +R ++ D +++ ++G+ LT L + +LL A ETT I
Sbjct: 218 LSRLIDSKRG---QDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIAN 274
Query: 291 AIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIV-P 349
+ L +P L L + MT + E R V
Sbjct: 275 GMYALLSHPDQLAALRAD----------------------MTLLDGAVEEMLRYEGPVES 312
Query: 350 GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNF 409
+R + + G IPAG V+V H P ++ DP F+ R +
Sbjct: 313 ATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRR--------DTAGH 364
Query: 410 MAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
+AFG G+ FC+G +++ + + L +
Sbjct: 365 LAFGHGIHFCIGAPLARLEARIAVRALLER 394
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 79/210 (37%), Gaps = 34/210 (16%)
Query: 231 LKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAITL 290
L L+ +R ++ D +++ ++G+ LT L + +LL A ETT I
Sbjct: 218 LSRLIDSKRG---QDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIAN 274
Query: 291 AIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIV-P 349
+ L +P L L + MT + E R V
Sbjct: 275 GMYALLSHPDQLAALRAD----------------------MTLLDGAVEEMLRYEGPVES 312
Query: 350 GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNF 409
+R + + G IPAG V+V H P ++ DP F+ R +
Sbjct: 313 ATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRR--------DTAGH 364
Query: 410 MAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
+AFG G+ FC+G +++ + + L +
Sbjct: 365 LAFGHGIHFCIGAPLARLEARIAVRALLER 394
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 79/210 (37%), Gaps = 34/210 (16%)
Query: 231 LKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAITL 290
L L+ +R ++ D +++ ++G+ LT L + +LL A ETT I
Sbjct: 218 LSRLIDSKRG---QDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIAN 274
Query: 291 AIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIV-P 349
+ L +P L L + MT + E R V
Sbjct: 275 GMYALLSHPDQLAALRAD----------------------MTLLDGAVEEMLRYEGPVES 312
Query: 350 GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNF 409
+R + + G IPAG V+V H P ++ DP F+ R +
Sbjct: 313 ATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRR--------DTAGH 364
Query: 410 MAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
+AFG G+ FC+G +++ + + L +
Sbjct: 365 LAFGHGIHFCIGAPLARLEARIAVRALLER 394
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 122/320 (38%), Gaps = 47/320 (14%)
Query: 124 YRYLKNMVLNLFGPESLRKMLPEVEQVARARLQQWSSQDTVELKEATATMIFDLTAKKLI 183
+R L+ + F P + P + + L Q + +E+ A + +I
Sbjct: 88 HRRLRTLASGAFTPRTTESYQPYIIETVHHLLDQVQGKKKMEVISDFAFPLASFVIANII 147
Query: 184 SYDQEKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQGRE----RAMKKLKNLLQERR 239
+E RE + LI I T K L +AM K L+Q+R+
Sbjct: 148 GVPEED-----REQLKEWAASLIQ---TIDFTRSRKALTEGNIMAVQAMAYFKELIQKRK 199
Query: 240 ANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAITLAIKFLSENP 299
+P Q D +LK +K+ LTE A +L A ETT I+ ++ L ++P
Sbjct: 200 RHP---QQDMISMLLKGREKDK--LTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHP 254
Query: 300 LVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVPGIFRKALRDI 359
E +LK REN T + E R + R A DI
Sbjct: 255 ----------EQLLKLRENPDLIGTA------------VEECLRYESPTQMTARVASEDI 292
Query: 360 QFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNFMAFGGGMRFC 419
G TI G V + A + +PS + +P F+ +R + ++FG G C
Sbjct: 293 DICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITR--------SPNPHLSFGHGHHVC 344
Query: 420 VGTDFTKVQMAVFLHCFLTK 439
+G+ +++ + ++ L +
Sbjct: 345 LGSSLARLEAQIAINTLLQR 364
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/363 (19%), Positives = 139/363 (38%), Gaps = 50/363 (13%)
Query: 81 ISTDPDLNYFIFQQEGQLFQSW--YPDTFTEIFGRQNVGSLHGFMYRYLKNMVLNLFGPE 138
+S+DP Y + E F ++ +P+ F N+G+ + L+ +V F
Sbjct: 57 LSSDPKKKYPGVEVE---FPAYLGFPEDVRNYFA-TNMGTSDPPTHTRLRKLVSQEFTVR 112
Query: 139 SLRKMLPEVEQVARARLQQWSSQDTVELKEATATMIFDLTAKKLISYDQEKSSENLR-EN 197
+ M P VEQ+ L + V++ + A + +L+ D++ E R +
Sbjct: 113 RVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAHPLPIKVICELLGVDEKYRGEFGRWSS 172
Query: 198 FVAFMEGLISFPLDIPGTAYHKCLQGRERAMKKLKNLLQERRANPRKEQSDFYDYVLKEL 257
+ M+ P A + RE + + +L++ RR P D +++
Sbjct: 173 EILVMD---------PERAEQRGQAARE-VVNFILDLVERRRTEP---GDDLLSALIRVQ 219
Query: 258 QKEGTILTEAIALDLMFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRE 317
+ L+ + VLL A FE++ I + L +P L + + A+ E
Sbjct: 220 DDDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVE 279
Query: 318 NVHSGLTWREYKSMTYTFQFINETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPP 377
+ + E + R A +++ G IP V+V
Sbjct: 280 EILRYIAPPETTT----------------------RFAAEEVEIGGVAIPQYSTVLVANG 317
Query: 378 AVHLNPSKYEDPLAFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFL 437
A + +P ++ DP F+ +R ++ ++FG G+ FC+G K++ V L
Sbjct: 318 AANRDPKQFPDPHRFDVTR--------DTRGHLSFGQGIHFCMGRPLAKLEGEVALRALF 369
Query: 438 TKY 440
++
Sbjct: 370 GRF 372
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 139/363 (38%), Gaps = 50/363 (13%)
Query: 81 ISTDPDLNYFIFQQEGQLFQSW--YPDTFTEIFGRQNVGSLHGFMYRYLKNMVLNLFGPE 138
+S+DP Y + E F ++ +P+ F N+G+ + L+ +V F
Sbjct: 56 LSSDPKKKYPGVEVE---FPAYLGFPEDVRNYFA-TNMGTSDPPTHTRLRKLVSQEFTVR 111
Query: 139 SLRKMLPEVEQVARARLQQWSSQDTVELKEATATMIFDLTAKKLISYDQEKSSENLR-EN 197
+ M P VEQ+ L + V++ + A + +L+ D++ E R +
Sbjct: 112 RVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAHPLPIKVICELLGVDEKYRGEFGRWSS 171
Query: 198 FVAFMEGLISFPLDIPGTAYHKCLQGRERAMKKLKNLLQERRANPRKEQSDFYDYVLKEL 257
+ M+ P A + RE + + +L++ RR P D +++
Sbjct: 172 EILVMD---------PERAEQRGQAARE-VVNFILDLVERRRTEP---GDDLLSALIRVQ 218
Query: 258 QKEGTILTEAIALDLMFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRE 317
+ L+ + VLL A FE++ I + L +P L + + A+ E
Sbjct: 219 DDDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVE 278
Query: 318 NVHSGLTWREYKSMTYTFQFINETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPP 377
+ R T +F E +++ G IP V+V
Sbjct: 279 EI-----LRYIAPPETTTRFAAE-----------------EVEIGGVAIPQYSTVLVANG 316
Query: 378 AVHLNPSKYEDPLAFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFL 437
A + +P ++ DP F+ +R ++ ++FG G+ FC+G K++ V L
Sbjct: 317 AANRDPKQFPDPHRFDVTR--------DTRGHLSFGQGIHFCMGRPLAKLEGEVALRALF 368
Query: 438 TKY 440
++
Sbjct: 369 GRF 371
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 128/347 (36%), Gaps = 51/347 (14%)
Query: 110 IFGRQNVGSLHGFMYRYLKNMVLNLFGPESLRKMLPEVEQVARARLQQWSSQDTV----E 165
+ G+ V L G +R+ K M + L PE +R + E R + W+ + + E
Sbjct: 69 LLGQGGVQGLDGETHRHRKQMFMGLMTPERVRALAQLFEAEWRRAVPGWTRKGEIVFYDE 128
Query: 166 LKEATATMIFDLTAKKLISYDQEKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ--- 222
L E + L + + LR F D G+A + L
Sbjct: 129 LHEPLTRAVCAWAGVPLPDDEAGNRAGELRALF------------DAAGSASPRHLWSRL 176
Query: 223 GRERAMKKLKNLLQERRANPRKEQSDFYDYVLK-ELQKEGTILTEAIA-LDLMFVLLFAS 280
R R K +++ RA S Y + + +L+ +A ++L+ VL
Sbjct: 177 ARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVL---- 232
Query: 281 FETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINE 340
+VAI + I F++ L+ + + L + Y F+ E
Sbjct: 233 --EPTVAIAVYITFVAH--------------ALQTCSGIRAALV----QQPDYAELFVQE 272
Query: 341 TARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGM 400
R P + +A +D +++G P G V++ + + + + DP F P R++
Sbjct: 273 VRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAW 332
Query: 401 ETNCASKNFMAFGGGMRF----CVGTDFTKVQMAVFLHCFLTKYRWQ 443
+ + S NF+ GGG + C G M V H + R+
Sbjct: 333 DED--SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYD 377
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 128/347 (36%), Gaps = 51/347 (14%)
Query: 110 IFGRQNVGSLHGFMYRYLKNMVLNLFGPESLRKMLPEVEQVARARLQQWSSQDTV----E 165
+ G+ V L G +R+ K M + L PE +R + E R + W+ + + E
Sbjct: 77 LLGQGGVQGLDGETHRHRKQMFMGLMTPERVRALAQLFEAEWRRAVPGWTRKGEIVFYDE 136
Query: 166 LKEATATMIFDLTAKKLISYDQEKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ--- 222
L E + L + + LR F D G+A + L
Sbjct: 137 LHEPLTRAVCAWAGVPLPDDEAGNRAGELRALF------------DAAGSASPRHLWSRL 184
Query: 223 GRERAMKKLKNLLQERRANPRKEQSDFYDYVLK-ELQKEGTILTEAIA-LDLMFVLLFAS 280
R R K +++ RA S Y + + +L+ +A ++L+ VL
Sbjct: 185 ARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVL---- 240
Query: 281 FETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINE 340
+VAI + I F++ L+ + + L + Y F+ E
Sbjct: 241 --RPTVAIAVYITFVAH--------------ALQTCSGIRAALV----QQPDYAELFVQE 280
Query: 341 TARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGM 400
R P + +A +D +++G P G V++ + + + + DP F P R++
Sbjct: 281 VRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAW 340
Query: 401 ETNCASKNFMAFGGGMRF----CVGTDFTKVQMAVFLHCFLTKYRWQ 443
+ + S NF+ GGG + C G M V H + R+
Sbjct: 341 DED--SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYD 385
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 86/215 (40%), Gaps = 32/215 (14%)
Query: 225 ERAMKKLKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETT 284
E+A + +L+ RR KE +D L + + + L+E LDL LL A +E+T
Sbjct: 204 EQAYAYMGDLIDRRR----KEPTDDLVSALVQARDQQDSLSEQELLDLAIGLLVAGYEST 259
Query: 285 SVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARL 344
+ I + L P + +QL + E I E + W T ++
Sbjct: 260 TTQIADFVYLLMTRPELRRQLLDRPELIPSAVEELTR---WVPLGVGTAAPRY------- 309
Query: 345 ANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNC 404
A+ D+ +G TI AG V+ A + + +++ D ++ +
Sbjct: 310 ----------AVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPD--------ADRIDVDR 351
Query: 405 ASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
+ FG G+ C+G +V++ V L L +
Sbjct: 352 TPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQR 386
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 128/347 (36%), Gaps = 51/347 (14%)
Query: 110 IFGRQNVGSLHGFMYRYLKNMVLNLFGPESLRKMLPEVEQVARARLQQWSSQDTV----E 165
+ G+ V L G +R+ K M + L PE +R + E R + W+ + + E
Sbjct: 69 LLGQGGVQGLDGETHRHRKQMFMGLMTPERVRALAQLFEAEWRRAVPGWTRKGEIVFYDE 128
Query: 166 LKEATATMIFDLTAKKLISYDQEKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ--- 222
L E + L + + LR F D G+A + L
Sbjct: 129 LHEPLTRAVCAWAGVPLPDDEAGNRAGELRALF------------DAAGSASPRHLWSRL 176
Query: 223 GRERAMKKLKNLLQERRANPRKEQSDFYDYVLK-ELQKEGTILTEAIA-LDLMFVLLFAS 280
R R K +++ RA S Y + + +L+ +A ++L+ VL
Sbjct: 177 ARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVL---- 232
Query: 281 FETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINE 340
+VAI + I F++ L+ + + L + Y F+ E
Sbjct: 233 --RPTVAIAVYITFVAH--------------ALQTCSGIRAALV----QQPDYAELFVQE 272
Query: 341 TARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGM 400
R P + +A +D +++G P G V++ + + + + DP F P R++
Sbjct: 273 VRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAW 332
Query: 401 ETNCASKNFMAFGGGMRF----CVGTDFTKVQMAVFLHCFLTKYRWQ 443
+ + S NF+ GGG + C G M V H + R+
Sbjct: 333 DED--SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYD 377
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 138/363 (38%), Gaps = 50/363 (13%)
Query: 81 ISTDPDLNYFIFQQEGQLFQSW--YPDTFTEIFGRQNVGSLHGFMYRYLKNMVLNLFGPE 138
+S+DP Y + E F ++ +P+ F N+G+ + L+ +V F
Sbjct: 56 LSSDPKKKYPGVEVE---FPAYLGFPEDVRNYFA-TNMGTSDPPTHTRLRKLVSQEFTVR 111
Query: 139 SLRKMLPEVEQVARARLQQWSSQDTVELKEATATMIFDLTAKKLISYDQEKSSENLR-EN 197
+ M P VEQ+ L + V++ + A + +L+ D++ E R +
Sbjct: 112 RVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAHPLPIKVICELLGVDEKYRGEFGRWSS 171
Query: 198 FVAFMEGLISFPLDIPGTAYHKCLQGRERAMKKLKNLLQERRANPRKEQSDFYDYVLKEL 257
+ M+ P A + RE + + +L++ RR P D +++
Sbjct: 172 EILVMD---------PERAEQRGQAARE-VVNFILDLVERRRTEP---GDDLLSALIRVQ 218
Query: 258 QKEGTILTEAIALDLMFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRE 317
+ L+ + VLL A FE + I + L +P L + + A+ E
Sbjct: 219 DDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVE 278
Query: 318 NVHSGLTWREYKSMTYTFQFINETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPP 377
+ R T +F E +++ G IP V+V
Sbjct: 279 EI-----LRYIAPPETTTRFAAE-----------------EVEIGGVAIPQYSTVLVANG 316
Query: 378 AVHLNPSKYEDPLAFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFL 437
A + +P ++ DP F+ +R ++ ++FG G+ FC+G K++ V L
Sbjct: 317 AANRDPKQFPDPHRFDVTR--------DTRGHLSFGQGIHFCMGRPLAKLEGEVALRALF 368
Query: 438 TKY 440
++
Sbjct: 369 GRF 371
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 138/363 (38%), Gaps = 50/363 (13%)
Query: 81 ISTDPDLNYFIFQQEGQLFQSW--YPDTFTEIFGRQNVGSLHGFMYRYLKNMVLNLFGPE 138
+S+DP Y + E F ++ +P+ F N+G+ + L+ +V F
Sbjct: 57 LSSDPKKKYPGVEVE---FPAYLGFPEDVRNYFA-TNMGTSDPPTHTRLRKLVSQEFTVR 112
Query: 139 SLRKMLPEVEQVARARLQQWSSQDTVELKEATATMIFDLTAKKLISYDQEKSSENLR-EN 197
+ M P VEQ+ L + V++ + A + +L+ D++ E R +
Sbjct: 113 RVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAHPLPIKVICELLGVDEKYRGEFGRWSS 172
Query: 198 FVAFMEGLISFPLDIPGTAYHKCLQGRERAMKKLKNLLQERRANPRKEQSDFYDYVLKEL 257
+ M+ P A + RE + + +L++ RR P D +++
Sbjct: 173 EILVMD---------PERAEQRGQAARE-VVNFILDLVERRRTEP---GDDLLSALIRVQ 219
Query: 258 QKEGTILTEAIALDLMFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRE 317
+ L+ + VLL A FE + I + L +P L + + A+ E
Sbjct: 220 DDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSALPNAVE 279
Query: 318 NVHSGLTWREYKSMTYTFQFINETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPP 377
+ R T +F E +++ G IP V+V
Sbjct: 280 EI-----LRYIAPPETTTRFAAE-----------------EVEIGGVAIPQYSTVLVANG 317
Query: 378 AVHLNPSKYEDPLAFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFL 437
A + +P ++ DP F+ +R ++ ++FG G+ FC+G K++ V L
Sbjct: 318 AANRDPKQFPDPHRFDVTR--------DTRGHLSFGQGIHFCMGRPLAKLEGEVALRALF 369
Query: 438 TKY 440
++
Sbjct: 370 GRF 372
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 86/217 (39%), Gaps = 36/217 (16%)
Query: 225 ERAMKKLKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETT 284
E+A + +L+ RR KE +D L + + + L+E LDL LL A +E+T
Sbjct: 204 EQAYAYMGDLIDRRR----KEPTDDLVSALVQARDQQDSLSEQELLDLAIGLLVAGYEST 259
Query: 285 SVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARL 344
+ I + L P + +QL + E I + E R
Sbjct: 260 TTQIADFVYLLMTRPELRRQLLDRPELIPSA----------------------VEELTRW 297
Query: 345 ANIVPGIF--RKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMET 402
+ G R A+ D+ +G TI AG V+ A + + +++ D ++
Sbjct: 298 VPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPD--------ADRIDV 349
Query: 403 NCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
+ + FG G+ C+G +V++ V L L +
Sbjct: 350 DRTPNQHLGFGHGVHHCLGAPLARVELQVALEVLLQR 386
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 128/347 (36%), Gaps = 51/347 (14%)
Query: 110 IFGRQNVGSLHGFMYRYLKNMVLNLFGPESLRKMLPEVEQVARARLQQWSSQDTV----E 165
+ G+ V L G +R+ K M + L PE +R + E R + W+ + + E
Sbjct: 77 LLGQGGVQGLDGETHRHRKQMFMGLMTPERVRALAQLFEAEWRRAVPGWTRKGEIVFYDE 136
Query: 166 LKEATATMIFDLTAKKLISYDQEKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ--- 222
L E + L + + LR F D G+A + L
Sbjct: 137 LHEPLTRAVCAWAGVPLPDDEAGNRAGELRALF------------DAAGSASPRHLWSRL 184
Query: 223 GRERAMKKLKNLLQERRANPRKEQSDFYDYVLK-ELQKEGTILTEAIA-LDLMFVLLFAS 280
R R K +++ RA S Y + + +L+ +A ++L+ VL
Sbjct: 185 ARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVL---- 240
Query: 281 FETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINE 340
+VAI + I F++ L+ + + L + Y F+ E
Sbjct: 241 --RPTVAIAVYITFVAH--------------ALQTCSGIRAALV----QQPDYAELFVQE 280
Query: 341 TARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGM 400
R P + +A +D +++G P G V++ + + + + DP F P R++
Sbjct: 281 VRRFYPFGPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAW 340
Query: 401 ETNCASKNFMAFGGGMRF----CVGTDFTKVQMAVFLHCFLTKYRWQ 443
+ + S NF+ GGG + C G M V H + R+
Sbjct: 341 DED--SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYD 385
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 92/226 (40%), Gaps = 12/226 (5%)
Query: 258 QKEGTILTEAIALDLMFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRE 317
++ +L++ L + + A ETT+ + + FL NP V K+L EE +
Sbjct: 263 DQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEE----IDQNV 318
Query: 318 NVHSGLTWREYKSMTYTFQFINETARLANIVPGIF-RKALRDIQFKGYTIPAGWAVMVCP 376
T + + I E RL + P + KA D + + G V++
Sbjct: 319 GFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINL 378
Query: 377 PAVHLNPSKYEDPLAFNPSRW---KGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFL 433
A+H N ++ P F P R+ G + S +++ FG G R C+G + ++ + +
Sbjct: 379 WALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIM 438
Query: 434 HCFLTKYRWQAIRGGNIVRTPGIQ----FPNGFHVRIIKKDATHES 475
L ++ + G + GI + F V+I + A E+
Sbjct: 439 AWLLQRFDLEVPDDGQLPSLEGIPKVVFLIDSFKVKIKVRQAWREA 484
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 83/208 (39%), Gaps = 38/208 (18%)
Query: 232 KNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAITLA 291
L+ RR P D ++ L + + + + L+ VL+ + ETT AIT A
Sbjct: 215 DELITARRKEP-------GDDLVSTLVTDDDLTIDDVLLNCDNVLIGGN-ETTRHAITGA 266
Query: 292 IKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVPGI 351
+ L+ P +L L R+ + T + E R + +
Sbjct: 267 VHALATVPGLLTAL--------------------RDGSADVDTV--VEEVLRWTSPAMHV 304
Query: 352 FRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNFMA 411
R D+ G +P+G V+ PA + +P++++DP F P R +
Sbjct: 305 LRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGR--------KPNRHIT 356
Query: 412 FGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
FG GM C+G+ +++++V L +
Sbjct: 357 FGHGMHHCLGSALARIELSVVLRVLAER 384
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 122/324 (37%), Gaps = 51/324 (15%)
Query: 124 YRYLKNMVLNLFGPESLRKMLPEVEQVARARLQQWSSQDTVELKEATA-----TMIFDLT 178
+R L+ +V + F P ++ + P + V R+ L + ++ +L + A T++ +L
Sbjct: 95 HRALRKVVSSAFTPRTISDLEPRIRDVTRSLLAD--AGESFDLVDVLAFPLPVTIVAELL 152
Query: 179 AKKLISYDQEKSSENLRENFVAFMEGLISFPLDIPGTAY--HKCLQGRERAMKKLKNLLQ 236
+ ++Q F + L+ +D P + LK
Sbjct: 153 GLPPMDHEQ----------FGDWSGALVDIQMDDPTDPALAERIADVLNPLTAYLKARCA 202
Query: 237 ERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAITLAIKFLS 296
ERRA+P + VL E+ +G L + A + LL A TT+V + ++ L
Sbjct: 203 ERRADPGDDL--ISRLVLAEV--DGRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLD 258
Query: 297 ENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVPGIFRKAL 356
E+P E+ I + E R P + R
Sbjct: 259 EHPAHWDAAAEDPGRIPA----------------------IVEEVLRYRPPFPQMQRTTT 296
Query: 357 RDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNFMAFGGGM 416
+ + G IPA V + + + ++DP F+PSR G ++FG G+
Sbjct: 297 KATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSRKSGGAAQ------LSFGHGV 350
Query: 417 RFCVGTDFTKVQMAVFLHCFLTKY 440
FC+G +++ V L + ++
Sbjct: 351 HFCLGAPLARLENRVALEEIIARF 374
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 122/324 (37%), Gaps = 51/324 (15%)
Query: 124 YRYLKNMVLNLFGPESLRKMLPEVEQVARARLQQWSSQDTVELKEATA-----TMIFDLT 178
+R L+ +V + F P ++ + P + V R+ L + ++ +L + A T++ +L
Sbjct: 115 HRALRKVVSSAFTPRTISDLEPRIRDVTRSLLAD--AGESFDLVDVLAFPLPVTIVAELL 172
Query: 179 AKKLISYDQEKSSENLRENFVAFMEGLISFPLDIPGTAY--HKCLQGRERAMKKLKNLLQ 236
+ ++Q F + L+ +D P + LK
Sbjct: 173 GLPPMDHEQ----------FGDWSGALVDIQMDDPTDPALAERIADVLNPLTAYLKARCA 222
Query: 237 ERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAITLAIKFLS 296
ERRA+P + VL E+ +G L + A + LL A TT+V + ++ L
Sbjct: 223 ERRADPGDDL--ISRLVLAEV--DGRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLD 278
Query: 297 ENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVPGIFRKAL 356
E+P E+ I + E R P + R
Sbjct: 279 EHPAHWDAAAEDPGRIPA----------------------IVEEVLRYRPPFPQMQRTTT 316
Query: 357 RDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNFMAFGGGM 416
+ + G IPA V + + + ++DP F+PSR G ++FG G+
Sbjct: 317 KATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSRKSGGAAQ------LSFGHGV 370
Query: 417 RFCVGTDFTKVQMAVFLHCFLTKY 440
FC+G +++ V L + ++
Sbjct: 371 HFCLGAPLARLENRVALEEIIARF 394
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 102/231 (44%), Gaps = 18/231 (7%)
Query: 225 ERAMKKLKNLLQ------ERRANPRKEQSDFYDYVLKEL--QKEGTILTEAIALDLMFVL 276
E+++K LK+ ++ RR + ++ + D+ + + +K G + E + + +
Sbjct: 245 EKSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELILAEKRGDLTRENVN-QCILEM 303
Query: 277 LFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQ 336
L A+ +T SV++ + ++++P V + + +E + ++ R+ + + + +
Sbjct: 304 LIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERD-----IKIDDIQKLKVMEN 358
Query: 337 FINETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSR 396
FI E+ R +V + RKAL D GY + G +++ +H + P F
Sbjct: 359 FIYESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMH-RLEFFPKPNEFT--- 414
Query: 397 WKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIRG 447
+ N + F FG G R C G V M L L ++ + ++G
Sbjct: 415 LENFAKNVPYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQG 465
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/362 (20%), Positives = 136/362 (37%), Gaps = 48/362 (13%)
Query: 81 ISTDPDLNYFIFQQEGQLFQSW--YPDTFTEIFGRQNVGSLHGFMYRYLKNMVLNLFGPE 138
+S+DP Y + E F ++ +P+ F N+G+ + L+ +V F
Sbjct: 56 LSSDPKKKYPGVEVE---FPAYLGFPEDVRNYFA-TNMGTSDPPTHTRLRKLVSQEFTVR 111
Query: 139 SLRKMLPEVEQVARARLQQWSSQDTVELKEATATMIFDLTAKKLISYDQEKSSENLRENF 198
+ M P VEQ+ L + V++ + A + +L+ D E R F
Sbjct: 112 RVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAHPLPIKVICELLGVD-----EAARGAF 166
Query: 199 VAFMEGLISFPLDIPGTAYHKCLQGRERAMKKLKNLLQERRANPRKEQSDFYDYVLKELQ 258
+ ++ P A + RE + + +L++ RR P D ++
Sbjct: 167 GRWSSEILVMD---PERAEQRGQAARE-VVNFILDLVERRRTEP---GDDLLSALISVQD 219
Query: 259 KEGTILTEAIALDLMFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNREN 318
+ L+ + VLL A FE + I + L +P L + + A+ E
Sbjct: 220 DDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRADPSALPNAVEE 279
Query: 319 VHSGLTWREYKSMTYTFQFINETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPA 378
+ R T +F E +++ G IP V+V A
Sbjct: 280 I-----LRYIAPPETTTRFAAE-----------------EVEIGGVAIPQYSTVLVANGA 317
Query: 379 VHLNPSKYEDPLAFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLT 438
+ +PS++ DP F+ +R ++ ++FG G+ FC+G K++ V L
Sbjct: 318 ANRDPSQFPDPHRFDVTR--------DTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFG 369
Query: 439 KY 440
++
Sbjct: 370 RF 371
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 127/347 (36%), Gaps = 51/347 (14%)
Query: 110 IFGRQNVGSLHGFMYRYLKNMVLNLFGPESLRKMLPEVEQVARARLQQWSSQDTV----E 165
+ G+ V L G +R+ K M + L PE +R + E R + W+ + + E
Sbjct: 69 LLGQGGVQGLDGETHRHRKQMFMGLMTPERVRALAQLFEAEWRRAVPGWTRKGEIVFYDE 128
Query: 166 LKEATATMIFDLTAKKLISYDQEKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ--- 222
L E + L + + LR F D G+A + L
Sbjct: 129 LHEPLTRAVCAWAGVPLPDDEAGNRAGELRALF------------DAAGSASPRHLWSRL 176
Query: 223 GRERAMKKLKNLLQERRANPRKEQSDFYDYVLK-ELQKEGTILTEAIA-LDLMFVLLFAS 280
R R K +++ RA S Y + + +L+ +A ++L+ VL
Sbjct: 177 ARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVL---- 232
Query: 281 FETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINE 340
+V I + I F++ L+ + + L + Y F+ E
Sbjct: 233 --RPTVEIAVYITFVAH--------------ALQTCSGIRAALV----QQPDYAELFVQE 272
Query: 341 TARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGM 400
R P + +A +D +++G P G V++ + + + + DP F P R++
Sbjct: 273 VRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAW 332
Query: 401 ETNCASKNFMAFGGGMRF----CVGTDFTKVQMAVFLHCFLTKYRWQ 443
+ + S NF+ GGG + C G M V H + R+
Sbjct: 333 DED--SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYD 377
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 90/228 (39%), Gaps = 46/228 (20%)
Query: 231 LKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAITL 290
L L+QERRANP D ++ +G ++ + ++ LL A+ +TT+ I L
Sbjct: 193 LYQLVQERRANP---GDDLISALITTEDPDG-VVDDMFLMNAAGTLLIAAHDTTACMIGL 248
Query: 291 AIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVPG 350
L ++P L L E+ + E + LT ++ G
Sbjct: 249 GTALLLDSPDQLALLREDPSLVGNAVEELLRYLTIGQF---------------------G 287
Query: 351 IFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNFM 410
R A RD++ G I G V+ A +P+ E+P F+ +R +
Sbjct: 288 GERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRPA--------PHL 339
Query: 411 AFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIRGGNIVRTPGIQF 458
AFG G C+G ++++ + F T +R R PG++
Sbjct: 340 AFGFGAHQCIGQQLARIELQI---VFETLFR----------RLPGLRL 374
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 90/228 (39%), Gaps = 46/228 (20%)
Query: 231 LKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAITL 290
L L+QERRANP D ++ +G ++ + ++ LL A+ +TT+ I L
Sbjct: 193 LYQLVQERRANP---GDDLISALITTEDPDG-VVDDMFLMNAAGTLLIAAHDTTACMIGL 248
Query: 291 AIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVPG 350
L ++P L L E+ + E + LT ++ G
Sbjct: 249 GTALLLDSPDQLALLREDPSLVGNAVEELLRYLTIGQF---------------------G 287
Query: 351 IFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNFM 410
R A RD++ G I G V+ A +P+ E+P F+ +R +
Sbjct: 288 GERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRPA--------PHL 339
Query: 411 AFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIRGGNIVRTPGIQF 458
AFG G C+G ++++ + F T +R R PG++
Sbjct: 340 AFGFGAHQCIGQQLARIELQI---VFETLFR----------RLPGLRL 374
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 90/228 (39%), Gaps = 46/228 (20%)
Query: 231 LKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAITL 290
L L+QERRANP D ++ +G ++ + ++ LL A+ +TT+ I L
Sbjct: 193 LYQLVQERRANP---GDDLISALITTEDPDG-VVDDMFLMNAAGTLLIAAHDTTACMIGL 248
Query: 291 AIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVPG 350
L ++P L L E+ + E + LT ++ G
Sbjct: 249 GTALLLDSPDQLALLREDPSLVGNAVEELLRYLTIGQF---------------------G 287
Query: 351 IFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNFM 410
R A RD++ G I G V+ A +P+ E+P F+ +R +
Sbjct: 288 GERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRPA--------PHL 339
Query: 411 AFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIRGGNIVRTPGIQF 458
AFG G C+G ++++ + F T +R R PG++
Sbjct: 340 AFGFGAHQCIGQQLARIELQI---VFETLFR----------RLPGLRL 374
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 84/206 (40%), Gaps = 35/206 (16%)
Query: 235 LQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAITLAIKF 294
+ ERR PR D ++ + G + TE + L + + + A ETT+ I L+
Sbjct: 209 VAERREEPR---DDLISKLVTDHLVPGNVTTEQL-LSTLGITINAGRETTTSMIALSTLL 264
Query: 295 LSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVPGI-FR 353
L + P + +L K ++E R+ ++ I R
Sbjct: 265 LLDRPELPAEL----------------------RKDPDLMPAAVDELLRVLSVADSIPLR 302
Query: 354 KALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNFMAFG 413
A DI+ G T+PA V+ + +P +++DP + ++ + + +AFG
Sbjct: 303 VAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDP--------ERVDFHRTDNHHVAFG 354
Query: 414 GGMRFCVGTDFTKVQMAVFLHCFLTK 439
G+ CVG ++++ V L L +
Sbjct: 355 YGVHQCVGQHLARLELEVALETLLRR 380
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 7/173 (4%)
Query: 250 YDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEH 309
Y ++ EL + + EAI + M L S +TT+ + + + L+ NP V + L +E
Sbjct: 260 YTGIVAELLLKAELSLEAIKANSM-ELTAGSVDTTAFPLLMTLFELARNPDVQQILRQES 318
Query: 310 EAILKN-RENVHSGLTWREYKSMTYTFQFINETARLANIVPGIFRKALRDIQFKGYTIPA 368
A + E+ T + + ET RL + + R D+ + Y IPA
Sbjct: 319 LAAAASISEHPQKATT-----ELPLLRAALKETLRLYPVGLFLERVVSSDLVLQNYHIPA 373
Query: 369 GWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNFMAFGGGMRFCVG 421
G V V ++ N + + P +NP RW + + + + + FG GMR C+G
Sbjct: 374 GTLVQVFLYSLGRNAALFPRPERYNPQRWLDIRGSGRNFHHVPFGFGMRQCLG 426
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/348 (19%), Positives = 127/348 (36%), Gaps = 41/348 (11%)
Query: 128 KNMVLNLFGPESLRKMLPEVEQVARARLQQWSSQDTVELKEATATMIFDLTAKKL---IS 184
+ + LN F P S+RK+ + ++A+A +Q+ D + + L +
Sbjct: 114 RGLTLNWFQPASIRKLEENIRRIAQASVQRLLDFDGECDFMTDCALYYPLHVVMTALGVP 173
Query: 185 YDQEKSSENLRENFVAFME---GLISFPLDIPGTAYHKCLQGRERAMKKLKNLLQERRAN 241
D E L ++F E ++ P A + + +RR+
Sbjct: 174 EDDEPLMLKLTQDFFGVHEPDEQAVAAPRQSADEAARRFHETIATFYDYFNGFTVDRRSC 233
Query: 242 PRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAITLAIKFLSENPLV 301
P+ + +L + +G + + + A +TTS + AI LS NP
Sbjct: 234 PKDDVMS----LLANSKLDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQ 289
Query: 302 LKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVPGIFRKALRDIQF 361
L L + A++ + ++E R V R AL D +
Sbjct: 290 LA-LAKSDPALIP---------------------RLVDEAVRWTAPVKSFMRTALADTEV 327
Query: 362 KGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNFMAFGGGMRFCVG 421
+G I G +M+ P+ + + + +P F+ +R+ + FG G C+G
Sbjct: 328 RGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRFP--------NRHLGFGWGAHMCLG 379
Query: 422 TDFTKVQMAVFLHCFLTKYRWQAIRG-GNIVRTPGIQFPNGFHVRIIK 468
K++M +F L K + + G +V T + P +R K
Sbjct: 380 QHLAKLEMKIFFEELLPKLKSVELSGPPRLVATNFVGGPKNVPIRFTK 427
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 8/170 (4%)
Query: 279 ASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFI 338
AS +T S A+ + + P V ++ E + ++ G + ++ Y F+
Sbjct: 290 ASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMG----DQPNLPYVLAFL 345
Query: 339 NETARLANIVP-GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRW 397
E R ++ VP I + GY IP V V +V+ +P K+ +P F+P+R+
Sbjct: 346 YEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARF 405
Query: 398 ---KGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQA 444
G+ + M F G R C+G + +K+Q+ +F+ + ++A
Sbjct: 406 LDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRA 455
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 119/311 (38%), Gaps = 37/311 (11%)
Query: 127 LKNMVLNLFGPESLRKMLPEVEQVARARLQQWSSQDTVELKEATATMIFDLTAKKLISYD 186
L++++ F P + + P + ++A A L + +Q +L E A + L L+
Sbjct: 109 LRSLLTTEFSPSIVTGLRPRIAELASALLDRLRAQRRPDLVEGFAAPLPILVISALLGIP 168
Query: 187 QEKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQGRERAMKKLKNLLQERRANPRKEQ 246
+E + LR N VA E + D G Y + E A ++ + +
Sbjct: 169 EEDHTW-LRANAVALQEASTTRARD--GRGYARA----EAASQEFTRYFRREVDRRGGDD 221
Query: 247 SDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAITLAIKFLSENPLVLKQLT 306
D +L + G+ L+ + LL A ETT+ + A+ L + VL +L
Sbjct: 222 RDDLLTLLVRARDTGSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELR 281
Query: 307 EEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVPGIFRKALRDIQFKGYTI 366
E+ T + E R V + R A DI+ + I
Sbjct: 282 TTPES----------------------TPAAVEELMRYDPPVQAVTRWAYEDIRLGDHDI 319
Query: 367 PAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTK 426
P G V+ + + +P+++ DP + R A++ + FG G+ +C+G +
Sbjct: 320 PRGSRVVALLGSANRDPARFPDPDVLDVHR--------AAERQVGFGLGIHYCLGATLAR 371
Query: 427 VQMAVFLHCFL 437
+ + L L
Sbjct: 372 AEAEIGLRALL 382
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 83/217 (38%), Gaps = 34/217 (15%)
Query: 231 LKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAITL 290
L+ L+ ERR P ++ L +++ G LTE + +LL A ETT
Sbjct: 212 LRALIDERRRTPGEDLMSG----LVAVEESGDQLTEDEIIATCNLLLIAGHETT------ 261
Query: 291 AIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVPG 350
+ ++ L + + + A+ + + I ET R V
Sbjct: 262 -VNLIANAALAMLRTPGQWAALAADGSRASA---------------VIEETMRYDPPVQL 305
Query: 351 IFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNFM 410
+ R A D+ +T+P G +++ A H +P+ P F+P R A +
Sbjct: 306 VSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR--------AQIRHL 357
Query: 411 AFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIRG 447
FG G FC+G +++ V L ++ + G
Sbjct: 358 GFGKGAHFCLGAPLARLEATVALPALAARFPEARLSG 394
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 22/108 (20%)
Query: 346 NIVPGIFRKALR--------------DIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLA 391
N++PGI +A+R D + G I AG +M+ A + +P+++ +P
Sbjct: 320 NLLPGIVEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRK 379
Query: 392 FNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
F+P+R + +AFG G C+G +++M V L L +
Sbjct: 380 FDPTR--------PANRHLAFGAGSHQCLGLHLARLEMRVLLDVLLDR 419
>pdb|2WM4|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp124 In Complex With Phytanic Acid
pdb|2WM5|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp124
Length = 435
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 32/198 (16%)
Query: 234 LLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAITLAIK 293
L ++RR N D L E + +G L+ +L+ A ETT AIT +
Sbjct: 233 LAEDRRVN----HHDDLTSSLVEAEVDGERLSSREIASFFILLVVAGNETTRNAITHGVL 288
Query: 294 FLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVPGIFR 353
LS P + R+ W ++ + T + E R A+ V + R
Sbjct: 289 ALSRYP--------------EQRDR-----WWSDFDGLAPTA--VEEIVRWASPVVYMRR 327
Query: 354 KALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNFMAFG 413
+DI+ +G + AG V + + + + SK+ DP F+ +R + + G
Sbjct: 328 TLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLAR-------NPNPHLGFGG 380
Query: 414 GGMRFCVGTDFTKVQMAV 431
GG FC+G + + ++ V
Sbjct: 381 GGAHFCLGANLARREIRV 398
>pdb|2WGY|A Chain A, Crystal Structure Of The G243a Mutant Of Cyp130 From M.
Tuberculosis
Length = 413
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 82/237 (34%), Gaps = 44/237 (18%)
Query: 228 MKKLKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVA 287
M L++ RR P + V + +G L F ++ A +T +
Sbjct: 200 MAYFTGLIERRRTEPADDA--ISHLVAAGVGADGDTAGTLSILAFTFTMVTAGNDTVTGM 257
Query: 288 ITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANI 347
+ ++ L P + L ++ E I + E RL +
Sbjct: 258 LGGSMPLLHRRPDQRRLLLDDPEGIPDA----------------------VEELLRLTSP 295
Query: 348 VPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASK 407
V G+ R RD+ TIPAG V++ L S D + P + T C +
Sbjct: 296 VQGLARTTTRDVTIGDTTIPAGRRVLL------LYGSANRDERQYGPDAAELDVTRC-PR 348
Query: 408 NFMAFGGGMRFCVGTDFTKVQMAVFLHCFL----------TKYRWQAIRGGNIVRTP 454
N + F G C+G ++Q V L L ++ W GG+ VR P
Sbjct: 349 NILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVAESRIVWS---GGSYVRRP 402
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Query: 340 ETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKG 399
E R + V FR RD++ G TI G V++ + + +P +++DP ++ +R
Sbjct: 290 EAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITR--- 346
Query: 400 METNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIRG 447
+ + FG G+ CVG +++ V L K I G
Sbjct: 347 -----KTSGHVGFGSGVHMCVGQLVARLEGEVVLAALARKVAAIEIAG 389
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/410 (20%), Positives = 155/410 (37%), Gaps = 73/410 (17%)
Query: 57 PFIKN------RMKSYGPIFRTSLVGR-PV----------IISTDP----DLNYFIFQQE 95
PF+ + R+++ GP+ L G PV + TDP D+N + +
Sbjct: 14 PFVTDLDGESARLRAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPRLVKDINVWGAWRR 73
Query: 96 GQLFQSWYPDTFTEIFGRQNVG----SLHGFMYRYLKNMVLNLFGPESLRKMLPEVEQVA 151
G++ W + G N G ++ G +R L+ +V + M + ++
Sbjct: 74 GEIPADW------PLIGLANPGRSMLTVDGAEHRRLRTLVAQALTVRRVEHMRGRITELT 127
Query: 152 RARLQQWSSQD-TVELKEATATMIFDLTAKKLISYDQEKSSENLRENFVAFMEGLISFPL 210
L + + V+LK A A + L+ +E L+ F F + P
Sbjct: 128 DRLLDELPADGGVVDLKAAFAYPLPMYVVADLMGI-EEARLPRLKVLFEKFFS-TQTPPE 185
Query: 211 DIPGTAYHKCLQGRERAMKKLKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIAL 270
++ T + +L +++ + A R D L + + G LT+A +
Sbjct: 186 EVVAT------------LTELASIMTDTVAAKRAAPGDDLTSALIQASENGDHLTDAEIV 233
Query: 271 DLMFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKS 330
+ +++ A ETT I A+ LS +P E A++ + E S +
Sbjct: 234 STLQLMVAAGHETTISLIVNAVVNLSTHP--------EQRALVLSGEAEWSAV------- 278
Query: 331 MTYTFQFINETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPL 390
+ T +F T+ + + R A D+ IPAG A++V A+ D
Sbjct: 279 VEETLRFSTPTSHV------LIRFAAEDVPVGDRVIPAGDALIVSYGAL------GRDER 326
Query: 391 AFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKY 440
A P+ + T + ++FG G C G ++++ V L ++
Sbjct: 327 AHGPTADRFDLTRTSGNRHISFGHGPHVCPGAALSRMEAGVALPALYARF 376
>pdb|2UUQ|A Chain A, Crystal Structure Of Cyp130 From Mycobacterium
Tuberculosis In The Ligand-Free Form
pdb|2UVN|A Chain A, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
pdb|2UVN|B Chain B, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
Length = 414
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 81/237 (34%), Gaps = 44/237 (18%)
Query: 228 MKKLKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVA 287
M L++ RR P + V + +G L F ++ +T +
Sbjct: 201 MAYFTGLIERRRTEPADDA--ISHLVAAGVGADGDTAGTLSILAFTFTMVTGGNDTVTGM 258
Query: 288 ITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANI 347
+ ++ L P + L ++ E I + E RL +
Sbjct: 259 LGGSMPLLHRRPDQRRLLLDDPEGIPDA----------------------VEELLRLTSP 296
Query: 348 VPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASK 407
V G+ R RD+ TIPAG V++ L S D + P + T C +
Sbjct: 297 VQGLARTTTRDVTIGDTTIPAGRRVLL------LYGSANRDERQYGPDAAELDVTRC-PR 349
Query: 408 NFMAFGGGMRFCVGTDFTKVQMAVFLHCFL----------TKYRWQAIRGGNIVRTP 454
N + F G C+G ++Q V L L ++ W GG+ VR P
Sbjct: 350 NILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVAESRIVWS---GGSYVRRP 403
>pdb|2WH8|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|B Chain B, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|C Chain C, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|D Chain D, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WHF|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
Length = 413
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 81/237 (34%), Gaps = 44/237 (18%)
Query: 228 MKKLKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVA 287
M L++ RR P + V + +G L F ++ +T +
Sbjct: 200 MAYFTGLIERRRTEPADDA--ISHLVAAGVGADGDTAGTLSILAFTFTMVTGGNDTVTGM 257
Query: 288 ITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANI 347
+ ++ L P + L ++ E I + E RL +
Sbjct: 258 LGGSMPLLHRRPDQRRLLLDDPEGIPDA----------------------VEELLRLTSP 295
Query: 348 VPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASK 407
V G+ R RD+ TIPAG V++ L S D + P + T C +
Sbjct: 296 VQGLARTTTRDVTIGDTTIPAGRRVLL------LYGSANRDERQYGPDAAELDVTRC-PR 348
Query: 408 NFMAFGGGMRFCVGTDFTKVQMAVFLHCFL----------TKYRWQAIRGGNIVRTP 454
N + F G C+G ++Q V L L ++ W GG+ VR P
Sbjct: 349 NILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVAESRIVWS---GGSYVRRP 402
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 78/211 (36%), Gaps = 33/211 (15%)
Query: 230 KLKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAIT 289
++ +L+++R NP +D L + + G I TE+ A+ + V I
Sbjct: 189 RVAEMLEDKRVNPGDGLAD----SLLDAARAGEI-TESEAIATILVFYAVGHMAIGYLIA 243
Query: 290 LAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVP 349
I+ + P V +N E+ + + INE R+
Sbjct: 244 SGIELFARRPEVFTAF--------RNDESARAAI--------------INEMVRMDPPQL 281
Query: 350 GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNF 409
R D++ G I AG + A + +P ++DP F+ +R AS+N
Sbjct: 282 SFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTR-----PPAASRN- 335
Query: 410 MAFGGGMRFCVGTDFTKVQMAVFLHCFLTKY 440
++FG G C G ++ + +Y
Sbjct: 336 LSFGLGPHSCAGQIISRAEATTVFAVLAERY 366
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 78/211 (36%), Gaps = 33/211 (15%)
Query: 230 KLKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAIT 289
++ +L+++R NP +D L + + G I TE+ A+ + V I
Sbjct: 187 RVAEMLEDKRVNPGDGLAD----SLLDAARAGEI-TESEAIATILVFYAVGHMAIGYLIA 241
Query: 290 LAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVP 349
I+ + P V +N E+ + + INE R+
Sbjct: 242 SGIELFARRPEVFTAF--------RNDESARAAI--------------INEMVRMDPPQL 279
Query: 350 GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNF 409
R D++ G I AG + A + +P ++DP F+ +R AS+N
Sbjct: 280 SFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTR-----PPAASRN- 333
Query: 410 MAFGGGMRFCVGTDFTKVQMAVFLHCFLTKY 440
++FG G C G ++ + +Y
Sbjct: 334 LSFGLGPHSCAGQIISRAEATTVFAVLAERY 364
>pdb|4APY|A Chain A, Ethylene Glycol-bound Form Of P450 Cyp125a3 From
Mycobacterium Smegmatis
Length = 433
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 81/208 (38%), Gaps = 45/208 (21%)
Query: 234 LLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALD----LMFVLLFASFETTSVAIT 289
+ +ER NP + D V K + E I E ++ D + +L A ETT +IT
Sbjct: 210 MAEERAVNPTE------DIVTKLI--EADIDGEKLSDDEFGFFVVMLAVAGNETTRNSIT 261
Query: 290 LAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVP 349
+ ++NP ++ E K R + +E R A V
Sbjct: 262 HGMIAFAQNP-------DQWELYKKERPETAA-----------------DEIVRWATPVS 297
Query: 350 GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNF 409
R AL D++ G I G V++ + + + +EDP FN R +
Sbjct: 298 AFQRTALEDVELGGVQIKKGQRVVMSYRSANFDEEVFEDPHTFNILR--------SPNPH 349
Query: 410 MAFGG-GMRFCVGTDFTKVQMAVFLHCF 436
+ FGG G +C+G + ++ + + +
Sbjct: 350 VGFGGTGAHYCIGANLARMTINLIFNAI 377
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 350 GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNF 409
G+ R AL D++ G I AG V V A + +P + DP + R
Sbjct: 295 GLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR--------DPNPH 346
Query: 410 MAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
+A+G G FC G ++Q + + L +
Sbjct: 347 LAYGNGHHFCTGAVLARMQTELLVDTLLER 376
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 350 GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNF 409
G+ R AL D++ G I AG V V A + +P + DP + R
Sbjct: 295 GLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR--------DPNPH 346
Query: 410 MAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
+A+G G FC G ++Q + + L +
Sbjct: 347 LAYGNGHHFCTGAVLARMQTELLVDTLLER 376
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 65/176 (36%), Gaps = 30/176 (17%)
Query: 272 LMFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSM 331
L+ LL A +TT I A+ L+ P L++L +
Sbjct: 242 LVRSLLSAGLDTTVNGIGAAVYCLARFPGELQRLRSDP---------------------- 279
Query: 332 TYTFQFINETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLA 391
T E R + V FR R+++ G I G V++ + + +P ++ DP
Sbjct: 280 TLARNAFEEAVRFESPVQTFFRTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDL 339
Query: 392 FNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQAIRG 447
++ +R + + FG G+ CVG +++ V L K I G
Sbjct: 340 YDITR--------KTSGHVGFGSGVHMCVGQLVARLEGEVMLSALARKVAAIDIDG 387
>pdb|3IVY|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, P212121 Crystal Form
pdb|3IW0|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, C2221 Crystal Form
pdb|3IW1|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Androstenedione
pdb|3IW2|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Econazole
Length = 433
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 79/214 (36%), Gaps = 51/214 (23%)
Query: 241 NPRKEQSDFYDYVLKELQKEG-----TILTEAIALDL-------------MFVLLFASFE 282
+P+ ++ Y +K +++ I+T+ I D+ + +L A E
Sbjct: 212 DPKASSAELIGYAMKMAEEKAKNPADDIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNE 271
Query: 283 TTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETA 342
TT +IT + +E+P W YK + +E
Sbjct: 272 TTRNSITQGMMAFAEHPD-----------------------QWELYKKVRPETA-ADEIV 307
Query: 343 RLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMET 402
R A V R ALRD + G I G V++ + + + ++DP FN R
Sbjct: 308 RWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILR------ 361
Query: 403 NCASKNFMAFGG-GMRFCVGTDFTKVQMAVFLHC 435
+ FGG G +C+G + ++ + + +
Sbjct: 362 --NPNPHVGFGGTGAHYCIGANLARMTINLIFNA 393
>pdb|2X5W|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Substrate Cholest-4-En-3-One
Length = 440
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 79/214 (36%), Gaps = 51/214 (23%)
Query: 241 NPRKEQSDFYDYVLKELQKEG-----TILTEAIALDL-------------MFVLLFASFE 282
+P+ ++ Y +K +++ I+T+ I D+ + +L A E
Sbjct: 219 DPKASSAELIGYAMKMAEEKAKNPADDIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNE 278
Query: 283 TTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETA 342
TT +IT + +E+P W YK + +E
Sbjct: 279 TTRNSITQGMMAFAEHPD-----------------------QWELYKKVRPETA-ADEIV 314
Query: 343 RLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMET 402
R A V R ALRD + G I G V++ + + + ++DP FN R
Sbjct: 315 RWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILR------ 368
Query: 403 NCASKNFMAFGG-GMRFCVGTDFTKVQMAVFLHC 435
+ FGG G +C+G + ++ + + +
Sbjct: 369 --NPNPHVGFGGTGAHYCIGANLARMTINLIFNA 400
>pdb|2XC3|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cyp125 Bound
To The Reverse Type I Inhibitor
Length = 424
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 79/214 (36%), Gaps = 51/214 (23%)
Query: 241 NPRKEQSDFYDYVLKELQKEG-----TILTEAIALDL-------------MFVLLFASFE 282
+P+ ++ Y +K +++ I+T+ I D+ + +L A E
Sbjct: 203 DPKASSAELIGYAMKMAEEKAKNPADDIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNE 262
Query: 283 TTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETA 342
TT +IT + +E+P W YK + +E
Sbjct: 263 TTRNSITQGMMAFAEHPD-----------------------QWELYKKVRPETA-ADEIV 298
Query: 343 RLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMET 402
R A V R ALRD + G I G V++ + + + ++DP FN R
Sbjct: 299 RWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILR------ 352
Query: 403 NCASKNFMAFGG-GMRFCVGTDFTKVQMAVFLHC 435
+ FGG G +C+G + ++ + + +
Sbjct: 353 --NPNPHVGFGGTGAHYCIGANLARMTINLIFNA 384
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 57/152 (37%), Gaps = 16/152 (10%)
Query: 303 KQLTEEHEAILKNRENVHSGLTW-------------REYKSMTYTFQFINETARLANIVP 349
+ L+E ++ E V S LTW R +S E RL
Sbjct: 210 RALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAALAAFQEALRLYPPAW 269
Query: 350 GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNF 409
+ R+ R + +P G +++ P + + AF P R+ E S +
Sbjct: 270 ILTRRLERPLLLGEDRLPQGTTLVLSPYVTQR--LYFPEGEAFQPERFLA-ERGTPSGRY 326
Query: 410 MAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYR 441
FG G R C+G DF ++ + L F ++R
Sbjct: 327 FPFGLGQRLCLGRDFALLEGPIVLRAFFRRFR 358
>pdb|2XN8|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125
Length = 423
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 79/214 (36%), Gaps = 51/214 (23%)
Query: 241 NPRKEQSDFYDYVLKELQKEG-----TILTEAIALDL-------------MFVLLFASFE 282
+P+ ++ Y +K +++ I+T+ I D+ + +L A E
Sbjct: 202 DPKASSAELIGYAMKMAEEKAKNPADDIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNE 261
Query: 283 TTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETA 342
TT +IT + +E+P W YK + +E
Sbjct: 262 TTRNSITQGMMAFAEHPD-----------------------QWELYKKVRPETA-ADEIV 297
Query: 343 RLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMET 402
R A V R ALRD + G I G V++ + + + ++DP FN R
Sbjct: 298 RWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILR------ 351
Query: 403 NCASKNFMAFGG-GMRFCVGTDFTKVQMAVFLHC 435
+ FGG G +C+G + ++ + + +
Sbjct: 352 --NPNPHVGFGGTGAHYCIGANLARMTINLIFNA 383
>pdb|2X5L|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125, Alternative Crystal
Form
Length = 431
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 79/214 (36%), Gaps = 51/214 (23%)
Query: 241 NPRKEQSDFYDYVLKELQKEG-----TILTEAIALDL-------------MFVLLFASFE 282
+P+ ++ Y +K +++ I+T+ I D+ + +L A E
Sbjct: 210 DPKASSAELIGYAMKMAEEKAKNPADDIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNE 269
Query: 283 TTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETA 342
TT +IT + +E+P W YK + +E
Sbjct: 270 TTRNSITQGMMAFAEHPD-----------------------QWELYKKVRPE-TAADEIV 305
Query: 343 RLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMET 402
R A V R ALRD + G I G V++ + + + ++DP FN R
Sbjct: 306 RWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILR------ 359
Query: 403 NCASKNFMAFGG-GMRFCVGTDFTKVQMAVFLHC 435
+ FGG G +C+G + ++ + + +
Sbjct: 360 --NPNPHVGFGGTGAHYCIGANLARMTINLIFNA 391
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/122 (20%), Positives = 49/122 (40%), Gaps = 9/122 (7%)
Query: 324 TWREYKSMTYTFQFINETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNP 383
+W +Y + + E R + V R ++ + I G V V + + +
Sbjct: 231 SW-DYVREKGALKAVEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDE 289
Query: 384 SKYEDPLAFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYRWQ 443
++DP +F P R ++FG G+ C+G +++ + L F K+R +
Sbjct: 290 EVFKDPDSFIPDR--------TPNPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVK 341
Query: 444 AI 445
I
Sbjct: 342 EI 343
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 350 GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNF 409
G+ R AL D++ KG I AG AV V A + +P + DP + R +
Sbjct: 292 GLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER--------SPNPH 343
Query: 410 MAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
++FG G +C G +++ + + L +
Sbjct: 344 VSFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 350 GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNF 409
G+ R AL D++ KG I AG AV V A + +P + DP + R +
Sbjct: 292 GLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER--------SPNPH 343
Query: 410 MAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
++FG G +C G +++ + + L +
Sbjct: 344 VSFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 350 GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNF 409
G+ R AL D++ KG I AG AV V A + +P + DP + R +
Sbjct: 292 GLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER--------SPNPH 343
Query: 410 MAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
++FG G +C G +++ + + L +
Sbjct: 344 VSFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 350 GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNF 409
G+ R AL D++ KG I AG AV V A + +P + DP + R +
Sbjct: 292 GLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER--------SPNPH 343
Query: 410 MAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
++FG G +C G +++ + + L +
Sbjct: 344 VSFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 350 GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNF 409
G+ R AL D++ KG I AG AV V A + +P + DP + R +
Sbjct: 292 GLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER--------SPNPH 343
Query: 410 MAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
++FG G +C G +++ + + L +
Sbjct: 344 VSFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 350 GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNF 409
G+ R AL D++ KG I AG AV V A + +P + DP + R +
Sbjct: 292 GLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER--------SPNPH 343
Query: 410 MAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
++FG G +C G +++ + + L +
Sbjct: 344 VSFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 350 GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNF 409
G+ R AL D++ KG I AG AV V A + +P + DP + R +
Sbjct: 292 GLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER--------SPNPH 343
Query: 410 MAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
++FG G +C G +++ + + L +
Sbjct: 344 VSFGFGPHYCPGGMLARLESELLVDAVLDR 373
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 79/200 (39%), Gaps = 39/200 (19%)
Query: 229 KKLKNLLQERRANPRKEQSDFYDYVLKELQKE-GTILTEAIALDLMFVLLFASFETTSVA 287
+ L NLL +RA+P D +L + ++ G +T+ L L+ ET +
Sbjct: 201 RYLDNLLARQRADPD-------DGLLGMIVRDHGDNVTDEELKGLCTALILGGVETVAGM 253
Query: 288 ITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETAR-LAN 346
I + L +NP ++ L ++S + +NE R L+
Sbjct: 254 IGFGVLALLDNPGQIELL----------------------FESPEKAERVVNELVRYLSP 291
Query: 347 IVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCAS 406
+ R A++D+ G I AG V+ + + + DP + +R A+
Sbjct: 292 VQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANR--------AA 343
Query: 407 KNFMAFGGGMRFCVGTDFTK 426
+ + FG G+ +CVG +
Sbjct: 344 VSDVGFGHGIHYCVGAALAR 363
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 119/333 (35%), Gaps = 70/333 (21%)
Query: 121 GFMYRYLKNMVLNLFGPESLRKMLPEVEQVARARLQQWSSQDTVELKEATATMIFDLTAK 180
G ++ + + + F P+++R +E+ ARA +W ++
Sbjct: 84 GESWKEARKALKDPFLPKNVRGYREAMEEEARAFFGEWRGEER----------------- 126
Query: 181 KLISYDQEKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQGRERAMKKLKN------- 233
D E + +LR L PL P A H L+ +R M + ++
Sbjct: 127 ---DLDHEMLALSLR----LLGRALFGKPLS-PSLAEH-ALKALDRIMAQTRSPLALLDL 177
Query: 234 -----LLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAI 288
++R A R+ ++ L L +E L+EA+ LL A ET + A+
Sbjct: 178 AAEARFRKDRGALYREAEALIVHPPLSHLPRE-RALSEAV------TLLVAGHETVASAL 230
Query: 289 TLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIV 348
T + LS P K++ +S E RL
Sbjct: 231 TWSFLLLSHRPDWQKRVA----------------------ESEEAALAAFQEALRLYPPA 268
Query: 349 PGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKN 408
+ R+ R + +P G +++ P + D AF P R+ E S
Sbjct: 269 WILTRRLERPLLLGEDRLPPGTTLVLSPYVTQR--LHFPDGEAFRPERFL-EERGTPSGR 325
Query: 409 FMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYR 441
+ FG G R C+G DF ++ + L F ++R
Sbjct: 326 YFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFR 358
>pdb|3OO3|A Chain A, Crystal Structure Of The Orf6 (Cyp165d3) Monooxygenase
Involved In Teicoplanin Biosynthesis
Length = 384
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 14/103 (13%)
Query: 339 NETARLANIVPG-IFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRW 397
E R A+IV R AL D++ G I AG V+ C LA N +
Sbjct: 264 EEVLRHASIVEAPAPRVALADVRMAGRDIHAG-DVLTC------------SMLATNRAPG 310
Query: 398 KGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKY 440
+ MAFG G+ C+G ++Q+ V L + ++
Sbjct: 311 DRFDITREKATHMAFGHGIHHCIGAPLARLQLRVALPAVVGRF 353
>pdb|3O1A|A Chain A, Structure Of Oxye (Cyp165d3), A Cytochrome P450 Involved
In Teicoplanin Biosynthesis
Length = 417
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 14/103 (13%)
Query: 339 NETARLANIVPG-IFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRW 397
E R A+IV R AL D++ G I AG V+ C LA N +
Sbjct: 297 EEVLRHASIVEAPAPRVALADVRMAGRDIHAG-DVLTC------------SMLATNRAPG 343
Query: 398 KGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKY 440
+ MAFG G+ C+G ++Q+ V L + ++
Sbjct: 344 DRFDITREKATHMAFGHGIHHCIGAPLARLQLRVALPAVVGRF 386
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/117 (19%), Positives = 44/117 (37%), Gaps = 8/117 (6%)
Query: 325 WREYKSMTYTFQFINETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPS 384
W+ + + I E R + V RK ++ TI G V V + + +
Sbjct: 231 WQRIREENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEE 290
Query: 385 KYEDPLAFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYR 441
+ D F P R ++FG G+ C+G +++ + + F ++R
Sbjct: 291 VFHDGEKFIPDR--------NPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFR 339
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/117 (19%), Positives = 44/117 (37%), Gaps = 8/117 (6%)
Query: 325 WREYKSMTYTFQFINETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPS 384
W+ + + I E R + V RK ++ TI G V V + + +
Sbjct: 231 WQRIREENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEE 290
Query: 385 KYEDPLAFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYR 441
+ D F P R ++FG G+ C+G +++ + + F ++R
Sbjct: 291 VFHDGEKFIPDR--------NPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFR 339
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 73/179 (40%), Gaps = 35/179 (19%)
Query: 264 LTEAIALDLMFVLLFASFETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGL 323
LT + + +L+ ETT+ I I+ + ENP ++ + LKNR SG
Sbjct: 173 LTMDEKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDII-------DDALKNR----SG- 220
Query: 324 TWREYKSMTYTFQFINETARLANIVPGI-FRKALRDIQFKGYTIPAGWAVMVCPPAVHLN 382
F+ ET R + + + R A D I G V+V + + +
Sbjct: 221 -------------FVEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRD 267
Query: 383 PSKYEDPLAFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKYR 441
+ +++P F R + +AFG G+ C+G +++ ++ L+ L ++
Sbjct: 268 ETFFDEPDLFKIGR---------REMHLAFGIGIHMCLGAPLARLEASIALNDILNHFK 317
>pdb|3OFU|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|D Chain D, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|E Chain E, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|F Chain F, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
Length = 396
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 88/238 (36%), Gaps = 43/238 (18%)
Query: 222 QGRERAMKKLKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASF 281
Q ++ A L +++R A P D + +L E G T A + LLF
Sbjct: 181 QLKQAADDYLWPFIEKRMAQP---GDDLFSRILSE-PVGGRPWTVDEARRMCRNLLFGGL 236
Query: 282 ETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINET 341
+T + I + L+ +P + L E + I + + R Y ++ +
Sbjct: 237 DTVAAMIGMVALHLARHPEDQRLLRERPDLIPAAADELM-----RRYPTVAVS------- 284
Query: 342 ARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVH-LNPSKYEDPLAFNPSRWKGM 400
R A+ D+ G TI G ++ P +H L+P+ +E P
Sbjct: 285 -----------RNAVADVDADGVTIRKG-DLVYLPSVLHNLDPASFEAPEEVR------F 326
Query: 401 ETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTKY--------RWQAIRGGNI 450
+ A G G CVG ++++ VFL +L + ++GGN+
Sbjct: 327 DRGLAPIRHTTMGVGAHRCVGAGLARMEVIVFLREWLGGMPEFALAPDKAVTMKGGNV 384
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 8/92 (8%)
Query: 338 INETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRW 397
I E R + V + R D F G + AG +M+ + + + S + DP F R
Sbjct: 270 IEEMLRWTSPVKNMCRTLTADTVFHGTELRAGEKIMLMFESANFDESVFGDPDNFRIDR- 328
Query: 398 KGMETNCASKNFMAFGGGMRFCVGTDFTKVQM 429
+ +AFG G FC+G ++++
Sbjct: 329 -------NPNSHVAFGFGTHFCLGNQLARLEL 353
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Query: 350 GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNF 409
G+ R A DIQ + G V+V + +P + +P + R +
Sbjct: 283 GLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPN-------PTSH 335
Query: 410 MAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
+AFG G FC+G+ + + + L K
Sbjct: 336 LAFGRGQHFCLGSALGRRHAQIGIEALLKK 365
>pdb|2X9P|A Chain A, X-Ray Structure Of The Substrate-Free Cytochrome P450 Pimd
- A Polyene Macrolide Antibiotic Pimaricin Epoxidase
pdb|2XBK|A Chain A, X-Ray Structure Of The Substrate-Bound Cytochrome P450
Pimd - A Polyene Macrolide Antibiotic Pimaricin
Epoxidase
Length = 404
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 122/318 (38%), Gaps = 59/318 (18%)
Query: 128 KNMVLNLFGPESLRKMLPEVEQVARARLQQWSSQDTVELKEATATMIFDLTAK-KLISYD 186
+ ++ LF + +M P+VE+ A L + +Q T+ F LT ++I
Sbjct: 109 RRLLTPLFSARRVLEMQPKVEEAADTLLDAFIAQGPPGDLHGELTVPFALTVLCEVIGVP 168
Query: 187 QEKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQGRERAMKKL----KNLLQERRANP 242
++ +E + L++ G A +G RA L L++ +RA P
Sbjct: 169 PQRRAE---------LTTLLA------GIAKLDDREGAVRAQDDLFGYVAGLVEHKRAEP 213
Query: 243 RKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASFETTSVAITLAIKFLSENPLVL 302
+ ++ L +G LTE L LLFA ++ + + + L+ +P
Sbjct: 214 GPD-------IISRLN-DGE-LTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHP--- 261
Query: 303 KQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLA-NIVPGIFRKALRDIQF 361
++ A L + + M + + TAR +++P R A D++F
Sbjct: 262 ----DQRAAALADPD------------VMARAVEEVLRTARAGGSVLPP--RYASEDMEF 303
Query: 362 KGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNFMAFGGGMRFCVG 421
G TI AG V+ + + + P F+ +R + FG G+ C+G
Sbjct: 304 GGVTIRAGDLVLFDLGLPNFDERAFTGPEEFDAAR--------TPNPHLTFGHGIWHCIG 355
Query: 422 TDFTKVQMAVFLHCFLTK 439
++++ T+
Sbjct: 356 APLARLELRTMFTKLFTR 373
>pdb|2XKR|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp142: A
Novel Cholesterol Oxidase
Length = 398
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Query: 338 INETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRW 397
I E R V + R D +F G + AG +M+ + + + + + +P F+ R
Sbjct: 267 IEEMLRWTAPVKNMCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQR- 325
Query: 398 KGMETNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
+ +AFG G FC+G ++++++ L +
Sbjct: 326 -------NPNSHLAFGFGTHFCLGNQLARLELSLMTERVLRR 360
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
Query: 350 GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNF 409
G+ R A DIQ + G V+V + +P + +P + R +
Sbjct: 283 GLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPN-------PTSH 335
Query: 410 MAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
+AFG G FC G+ + + + L K
Sbjct: 336 LAFGRGQHFCPGSALGRRHAQIGIEALLKK 365
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
Query: 350 GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNF 409
G+ R A DIQ + G V+V + +P + +P + R +
Sbjct: 283 GLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPN-------PTSH 335
Query: 410 MAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
+AFG G FC G+ + + + L K
Sbjct: 336 LAFGRGQHFCPGSALGRRHAQIGIEALLKK 365
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
Query: 350 GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNF 409
G+ R A DIQ + G V+V + +P + +P + R +
Sbjct: 282 GLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPN-------PTSH 334
Query: 410 MAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
+AFG G FC G+ + + + L K
Sbjct: 335 LAFGRGQHFCPGSALGRRHAQIGIEALLKK 364
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
Query: 350 GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNF 409
G+ R A DIQ + G V+V + +P + +P + R +
Sbjct: 283 GLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPN-------PTSH 335
Query: 410 MAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
+AFG G FC G+ + + + L K
Sbjct: 336 LAFGRGQHFCPGSALGRRHAQIGIEALLKK 365
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
Query: 350 GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNF 409
G+ R A DIQ + G V+V + +P + +P + R +
Sbjct: 283 GLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPN-------PTSH 335
Query: 410 MAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
+AFG G FC G+ + + + L K
Sbjct: 336 LAFGRGQHFCPGSALGRRHAQIGIEALLKK 365
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
Query: 350 GIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNF 409
G+ R A DIQ + G V+V + +P + +P + R +
Sbjct: 283 GLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPN-------PTSH 335
Query: 410 MAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
+AFG G FC G+ + + + L K
Sbjct: 336 LAFGRGQHFCPGSALGRRHAQIGIEALLKK 365
>pdb|4DXY|A Chain A, Crystal Structures Of Cyp101d2 Y96a Mutant
Length = 417
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 353 RKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNFMAF 412
R +D ++KG + G +++ P A+H +D A NP WK ++ + S + F
Sbjct: 306 RMVAKDQEYKGVFLKRG-DMILLPTALH----GLDD--AANPEPWK-LDFSRRSISHSTF 357
Query: 413 GGGMRFCVGTDFTKVQMAVFLHCFLTK 439
GGG C G ++++ V L +L +
Sbjct: 358 GGGPHRCAGMHLARMEVIVTLEEWLKR 384
>pdb|3NV5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101d2
pdb|3NV6|A Chain A, Crystal Structure Of Camphor-Bound Cyp101d2
Length = 452
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 353 RKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNFMAF 412
R +D ++KG + G +++ P A+H +D A NP WK ++ + S + F
Sbjct: 341 RMVAKDQEYKGVFLKRG-DMILLPTALH----GLDD--AANPEPWK-LDFSRRSISHSTF 392
Query: 413 GGGMRFCVGTDFTKVQMAVFLHCFLTK 439
GGG C G ++++ V L +L +
Sbjct: 393 GGGPHRCAGMHLARMEVIVTLEEWLKR 419
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Query: 372 VMVCPPAVHLNPSKYEDPLAFNPSRWKGMETNCASKNFMAFGGGMRFCVGTDFTKVQ 428
V+V A + +P +Y+ P F+ +E + M+FG GMR+C+G+ + Q
Sbjct: 304 VVVLAGAANRDPRRYDRPDDFD------IERDPVPS--MSFGAGMRYCLGSYLARTQ 352
>pdb|3FWG|A Chain A, Ferric Camphor Bound Cytochrome P450cam, Arg365leu,
Glu366gln, Monoclinic Crystal Form
pdb|3FWG|B Chain B, Ferric Camphor Bound Cytochrome P450cam, Arg365leu,
Glu366gln, Monoclinic Crystal Form
Length = 405
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 39/218 (17%), Positives = 86/218 (39%), Gaps = 35/218 (16%)
Query: 222 QGRERAMKKLKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASF 281
+ +E L ++++RR P + ++ Q G +T A + +LL
Sbjct: 186 EAKEALYDYLIPIIEQRRQKPGTDAIS----IVANGQVNGRPITSDEAKRMCGLLLVGGL 241
Query: 282 ETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINET 341
+T ++ +++FL+++P E + +++ E + + + + F + +
Sbjct: 242 DTVVNFLSFSMEFLAKSP-------EHRQELIQRPERIPAAC-----EELLRRFSLVADG 289
Query: 342 ARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGME 401
L + D +F G + G +++ L+ + P+ + SR K
Sbjct: 290 RILTS-----------DYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQKVSH 338
Query: 402 TNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
T FG G C+G ++Q+ V L +LT+
Sbjct: 339 TT--------FGHGSHLCLGQHLARLQIIVTLKEWLTR 368
>pdb|1KXM|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Transfer Pathway Excised To Form A
Ligand Binding Channel
Length = 290
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 110 IFGRQNVGSLHGFMYRYLKNMVLNLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELK 167
+ G +G H Y N+F E +L E ++ + A +QW S+ +
Sbjct: 169 LMGAHALGKTHLKNSGYEGGGANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMML 228
Query: 168 EATATMIFD---LTAKKLISYDQEKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
++I D L+ K + DQ+K ++ + F +E I+FP D P K L+
Sbjct: 229 PTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 286
>pdb|4EK1|A Chain A, Crystal Structure Of Electron-Spin Labeled Cytochrome
P450cam
pdb|4EK1|B Chain B, Crystal Structure Of Electron-Spin Labeled Cytochrome
P450cam
Length = 414
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 42/218 (19%), Positives = 83/218 (38%), Gaps = 35/218 (16%)
Query: 222 QGRERAMKKLKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASF 281
+ +E L ++++RR P + ++ Q G +T A + +LL
Sbjct: 195 EAKEALYDYLIPIIEQRRQKPGTDAIS----IVANGQVNGRPITSDEAKRMCGLLLVGGL 250
Query: 282 ETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINET 341
+T ++ +++FL+++P ++L E E I E +
Sbjct: 251 DTVVNFLSFSMEFLAKSPEHRQELIERPERIPAASEEL---------------------L 289
Query: 342 ARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGME 401
R + + G R D +F G + G +++ L+ + P+ + SR K
Sbjct: 290 RRFSLVADG--RILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMHVDFSRQKVSH 347
Query: 402 TNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
T FG G C+G + ++ V L +LT+
Sbjct: 348 TT--------FGHGSHLCLGQHLARREIIVTLKEWLTR 377
>pdb|3EXB|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Pathway Excised In A Complex With A
Peptide Wire
Length = 295
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 110 IFGRQNVGSLHGFMYRYLKNMVLNLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELK 167
+ G +G H Y N+F E +L E ++ + A +QW S+ +
Sbjct: 174 LMGAHALGKTHLKNSGYEGGGANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMML 233
Query: 168 EATATMIFD---LTAKKLISYDQEKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
++I D L+ K + DQ+K ++ + F +E I+FP D P K L+
Sbjct: 234 PTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 291
>pdb|1KXN|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A
Proposed Electron Transfer Pathway Excised To Form A
Ligand Binding Channel
Length = 289
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 110 IFGRQNVGSLHGFMYRYLKNMVLNLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELK 167
+ G +G H Y N+F E +L E ++ + A +QW S+ +
Sbjct: 168 LMGAHALGKTHLKNSGYEGGGANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMML 227
Query: 168 EATATMIFD---LTAKKLISYDQEKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
++I D L+ K + DQ+K ++ + F +E I+FP D P K L+
Sbjct: 228 PTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 285
>pdb|1CCI|A Chain A, How Flexible Are Proteins? Trapping Of A Flexible Loop
pdb|1CCJ|A Chain A, Conformer Selection By Ligand Binding Observed With
Protein Crystallography
Length = 294
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 196 NVFTNEGYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 255
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 256 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 290
>pdb|2GQX|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A) WITH PENTACHLOROBENZENE
pdb|2GQX|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A) WITH PENTACHLOROBENZENE
pdb|2GR6|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A)
pdb|2GR6|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A)
Length = 405
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/218 (19%), Positives = 82/218 (37%), Gaps = 35/218 (16%)
Query: 222 QGRERAMKKLKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASF 281
+ +E L ++++RR P + ++ Q G +T A + LL
Sbjct: 186 EAKEALYDYLIPIIEQRRQKPGTDAIS----IVANGQVNGRPITSDEAKRMCGALLLGGL 241
Query: 282 ETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINET 341
+T ++ +++FL+++P ++L E E I E +
Sbjct: 242 DTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEEL---------------------L 280
Query: 342 ARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGME 401
R + + G R D +F G + G +++ L+ + P+ + SR K
Sbjct: 281 RRFSLVADG--RILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMHVDFSRQKVSH 338
Query: 402 TNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
T FG G C+G + ++ V L +LT+
Sbjct: 339 TT--------FGHGSHLCLGQHLARREIIVTLKEWLTR 368
>pdb|1CCL|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 193 NVFTNEKYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 252
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 253 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 287
>pdb|1QMQ|A Chain A, Optical Detection Of Cytochrome P450 By Sensitizer-Linked
Substrates
pdb|1GJM|A Chain A, Covalent Attachment Of An Electroactive Sulphydryl Reagent
In The Active Site Of Cytochrome P450cam
pdb|1K2O|A Chain A, Cytochrome P450cam With Bound
Bis(2,2'-Bipyridine)-(5-Methyl-2-2'-
Bipyridine)-C2-Adamantane Ruthenium (Ii)
pdb|1K2O|B Chain B, Cytochrome P450cam With Bound
Bis(2,2'-Bipyridine)-(5-Methyl-2-2'-
Bipyridine)-C2-Adamantane Ruthenium (Ii)
pdb|1T87|A Chain A, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam (C334a)
pdb|1T87|B Chain B, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam (C334a)
pdb|1T88|A Chain A, Crystal Structure Of The Ferrous Cytochrome P450cam
(C334a)
pdb|1T88|B Chain B, Crystal Structure Of The Ferrous Cytochrome P450cam
(C334a)
pdb|3L61|A Chain A, Crystal Structure Of Substrate-Free P450cam At 200 Mm [k+]
pdb|3L62|A Chain A, Crystal Structure Of Substrate-Free P450cam At Low [k+]
pdb|3L63|A Chain A, Crystal Structure Of Camphor-Bound P450cam At Low [k+]
pdb|3OIA|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8gluetg-Bio
pdb|3OL5|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized With
A Tethered Substrate Analog 3oh-Adac1-C8-Dans
pdb|3P6M|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8-Dans
pdb|3P6N|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8-Dans
pdb|3P6O|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-Etg-Dans
pdb|3P6P|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog Adac1-C6-Bio
pdb|3P6Q|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-Etg-Boc
pdb|3P6R|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
3oh-Adac1-Etg-Boc
pdb|3P6S|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-C8-Dans
pdb|3P6T|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-C8-Dans
pdb|3P6U|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-C6-Dans
pdb|3P6V|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
3et-Adac1-Etg-Boc
pdb|3P6W|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-Etg-Boc
pdb|3P6X|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-C8-Dans
pdb|4G3R|A Chain A, Crystal Structure Of Nitrosyl Cytochrome P450cam
pdb|4G3R|B Chain B, Crystal Structure Of Nitrosyl Cytochrome P450cam
Length = 414
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/218 (19%), Positives = 83/218 (38%), Gaps = 35/218 (16%)
Query: 222 QGRERAMKKLKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASF 281
+ +E L ++++RR P + ++ Q G +T A + +LL
Sbjct: 195 EAKEALYDYLIPIIEQRRQKPGTDAIS----IVANGQVNGRPITSDEAKRMCGLLLVGGL 250
Query: 282 ETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINET 341
+T ++ +++FL+++P ++L E E I E +
Sbjct: 251 DTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEEL---------------------L 289
Query: 342 ARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGME 401
R + + G R D +F G + G +++ L+ + P+ + SR K
Sbjct: 290 RRFSLVADG--RILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMHVDFSRQKVSH 347
Query: 402 TNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
T FG G C+G + ++ V L +LT+
Sbjct: 348 TT--------FGHGSHLCLGQHLARREIIVTLKEWLTR 377
>pdb|2A1M|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of Wild-Type
Cytochrome P450cam
pdb|2A1M|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of Wild-Type
Cytochrome P450cam
Length = 415
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/218 (19%), Positives = 83/218 (38%), Gaps = 35/218 (16%)
Query: 222 QGRERAMKKLKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASF 281
+ +E L ++++RR P + ++ Q G +T A + +LL
Sbjct: 196 EAKEALYDYLIPIIEQRRQKPGTDAIS----IVANGQVNGRPITSDEAKRMCGLLLVGGL 251
Query: 282 ETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINET 341
+T ++ +++FL+++P ++L E E I E +
Sbjct: 252 DTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEEL---------------------L 290
Query: 342 ARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGME 401
R + + G R D +F G + G +++ L+ + P+ + SR K
Sbjct: 291 RRFSLVADG--RILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMHVDFSRQKVSH 348
Query: 402 TNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
T FG G C+G + ++ V L +LT+
Sbjct: 349 TT--------FGHGSHLCLGQHLARREIIVTLKEWLTR 378
>pdb|2CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 198 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTNYSLIQDPKYLSIVKEYANDQ 257
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 258 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 292
>pdb|2ZUJ|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant(D297l)
Length = 415
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 84/218 (38%), Gaps = 35/218 (16%)
Query: 222 QGRERAMKKLKNLLQERRANPRKEQSDFYDYVLKELQKEGTILTEAIALDLMFVLLFASF 281
+ +E L ++++RR P + ++ Q G +T A + +LL
Sbjct: 196 EAKEALYDYLIPIIEQRRQKPGTDAIS----IVANGQVNGRPITSDEAKRMCGLLLVGGL 251
Query: 282 ETTSVAITLAIKFLSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINET 341
+T ++ +++FL+++P ++L E E I E E
Sbjct: 252 DTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACE----------------------EL 289
Query: 342 ARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPSKYEDPLAFNPSRWKGME 401
R ++V + R D +F G + G +++ L+ + P+ + SR K
Sbjct: 290 LRRFSLV-ALGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQKVSH 348
Query: 402 TNCASKNFMAFGGGMRFCVGTDFTKVQMAVFLHCFLTK 439
T FG G C+G + ++ V L +LT+
Sbjct: 349 TT--------FGHGSHLCLGQHLARREIIVTLKEWLTR 378
>pdb|1CCK|A Chain A, Altering Substrate Specificity Of Cytochrome C Peroxidase
Towards A Small Molecular Substrate Peroxidase By
Substituting Tyrosine For Phe 202
Length = 291
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 193 NVFTNEYYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 252
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 253 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 287
>pdb|1CCC|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 199 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTAYSLIQDPKYLSIVKEYANDQ 258
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 259 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 293
>pdb|1CYF|A Chain A, Identifying The Physiological Electron Transfer Site Of
Cytochrome C Peroxidase By Structure-Based Engineering
Length = 296
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 198 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 257
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 258 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 292
>pdb|2PCB|A Chain A, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCB|C Chain C, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCC|A Chain A, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|2PCC|C Chain C, Crystal Structure Of A Complex Between Electron Transfer
Partners, Cytochrome C Peroxidase And Cytochrome C
pdb|1U74|A Chain A, Electron Transfer Complex Between Cytochrome C And
Cytochrome C Peroxidase
pdb|1U74|C Chain C, Electron Transfer Complex Between Cytochrome C And
Cytochrome C Peroxidase
pdb|1U75|A Chain A, Electron Transfer Complex Between Horse Heart Cytochrome C
And Zinc- Porphyrin Substituted Cytochrome C Peroxidase
pdb|1U75|C Chain C, Electron Transfer Complex Between Horse Heart Cytochrome C
And Zinc- Porphyrin Substituted Cytochrome C Peroxidase
pdb|2BCN|A Chain A, Solvent Isotope Effects On Interfacial Protein Electron
Transfer Between Cytochrome C And Cytochrome C
Peroxidase
pdb|2BCN|C Chain C, Solvent Isotope Effects On Interfacial Protein Electron
Transfer Between Cytochrome C And Cytochrome C
Peroxidase
pdb|1CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 198 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 257
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 258 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 292
>pdb|1CMU|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An
Artificial Cavity At The Radical Site Of Cytochrome C
Peroxidase
Length = 294
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 196 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTNYSLIQDPKYLSIVKEYANDQ 255
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 256 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 290
>pdb|4A7M|A Chain A, Cytochrome C Peroxidase S81w Mutant
Length = 296
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 198 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 257
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 258 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 292
>pdb|4CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of
Cytochrome C Peroxidase
Length = 294
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 196 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 255
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 256 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 290
>pdb|3CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of
Cytochrome C Peroxidase
Length = 294
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 196 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 255
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 256 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 290
>pdb|7CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between
Cytochrome C Peroxidase And Hydrogen Peroxide
Length = 296
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 198 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 257
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 258 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 292
>pdb|2GB8|A Chain A, Solution Structure Of The Complex Between Yeast Iso-1-
Cytochrome C And Yeast Cytochrome C Peroxidase
pdb|2JTI|A Chain A, Solution Structure Of The Yeast Iso-1-Cytochrome C (T12a)
: Yeast Cytochrome C Peroxidase Complex
Length = 294
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 196 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 255
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 256 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 290
>pdb|1MK8|A Chain A, Crystal Structure Of A Mutant Cytochrome C Peroxidase
Showing A Novel Trp-Tyr Covalent Cross-Link
pdb|1MKQ|A Chain A, Crystal Structure Of The Mutant Variant Of Cytochrome C
Peroxidase In The 'open' Uncross-Linked Form
pdb|1MKR|A Chain A, Crystal Structure Of A Mutant Variant Of Cytochrome C
Peroxidase (Plate Like Crystals)
pdb|1ML2|A Chain A, Crystal Structure Of A Mutant Variant Of Cytochrome C
Peroxidase With Zn(Ii)-(20-Oxo-Protoporphyrin Ix)
Length = 294
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 196 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 255
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 256 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 290
>pdb|1DS4|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex,
Ph 6, 100k
pdb|1DSG|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex At
Ph 5, Room Temperature.
pdb|1DSO|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex At
Ph 6, Room Temperature.
pdb|1DSP|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex At
Ph 7, Room Temperature
Length = 292
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 194 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 253
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 254 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 288
>pdb|6CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between
Cytochrome C Peroxidase And Hydrogen Peroxide
Length = 296
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 198 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 257
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 258 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 292
>pdb|1DSE|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex,
With Phosphate Bound, Ph 6, 100k
Length = 292
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 194 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 253
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 254 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 288
>pdb|5CCP|A Chain A, Histidine 52 Is A Critical Residue For Rapid Formation Of
Cytochrome C Peroxidase Compound I
Length = 296
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 198 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 257
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 258 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 292
>pdb|4CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 198 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 257
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 258 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 292
>pdb|1DJ1|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C
Peroxidase
pdb|1DJ5|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C
Peroxidase With N-Hydroxyguanidine Bound
Length = 291
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 193 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 252
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 253 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 287
>pdb|1DCC|A Chain A, 2.2 Angstrom Structure Of Oxyperoxidase: A Model For The
Enzyme:peroxide Complex
pdb|3CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C
Peroxidase And Three Heme-Cleft Mutants Prepared By
Site-Directed Mutagenesis
Length = 296
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 198 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 257
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 258 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 292
>pdb|1BEM|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 7/120 (5%)
Query: 110 IFGRQNVGSLH--GFMYRYLKNMVLNLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVE 165
+ G +G H Y + N+F E +L E ++ + A +QW S+
Sbjct: 168 LMGAHALGKTHLKNSGYEGPQGAANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYM 227
Query: 166 LKEATATMIFD---LTAKKLISYDQEKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+ ++I D L+ K + DQ+K ++ + F +E I+FP D P K L+
Sbjct: 228 MLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLEDGITFPKDAPSPFIFKTLE 287
>pdb|1CCA|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 199 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 258
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 259 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 293
>pdb|4A78|A Chain A, Cytochrome C Peroxidase M119w In Complex With Guiacol
Length = 296
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 198 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 257
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 258 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 292
>pdb|3R98|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C
Peroxidase
pdb|3R99|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C
Peroxidase
Length = 293
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 195 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 254
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 255 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 289
>pdb|1KOK|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase
(Mpccp)
pdb|1ZBY|A Chain A, High-resolution Crystal Structure Of Native (resting)
Cytochrome C Peroxidase (ccp)
pdb|1ZBZ|A Chain A, High-Resolution Crystal Structure Of Compound I
Intermediate Of Cytochrome C Peroxidase (Ccp)
pdb|1S73|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase (R-
Isomer) [mpccp-R]
pdb|1SBM|A Chain A, Crystal Structure Of Reduced Mesopone Cytochrome C
Peroxidase (R-Isomer)
pdb|1Z53|A Chain A, The 1.13 Angstrom Structure Of Iron-Free Cytochrome C
Peroxidase
pdb|1SDQ|A Chain A, Structure Of Reduced-No Adduct Of Mesopone Cytochrome C
Peroxidase
pdb|2B0Z|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82i Cytochrome C And Cytochrome C Peroxidase
pdb|2B10|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82s Cytochrome C And Cytochrome C Peroxidase
pdb|2B10|C Chain C, Crystal Structure Of The Protein-Protein Complex Between
F82s Cytochrome C And Cytochrome C Peroxidase
pdb|2B11|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82w Cytochrome C And Cytochrome C Peroxidase
pdb|2B11|C Chain C, Crystal Structure Of The Protein-Protein Complex Between
F82w Cytochrome C And Cytochrome C Peroxidase
pdb|2B12|A Chain A, Crystal Structure Of The Protein-Protein Complex Between
F82y Cytochrome C And Cytochrome C Peroxidase
pdb|2CYP|A Chain A, Crystal Structure Of Yeast Cytochrome C Peroxidase Refined
At 1.7-Angstroms Resolution
pdb|2YCG|A Chain A, Structure Of Unreduced Ferric Cytochrome C Peroxidase
Obtained By Multicrystal Method
Length = 294
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 196 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 255
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 256 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 290
>pdb|2XJ5|A Chain A, The Structure Of Cytochrome C Peroxidase Compound Ii
pdb|2XJ8|A Chain A, The Structure Of Ferrous Cytochrome C Peroxidase
Length = 294
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 196 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 255
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 256 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 290
>pdb|3M23|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M25|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M26|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M27|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M28|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M29|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2A|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2B|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2C|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2D|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2E|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2F|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2G|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2H|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
pdb|3M2I|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of
The Peroxidase Ferryl Intermediate
Length = 291
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 193 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 252
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 253 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 287
>pdb|3E2O|A Chain A, Crystal Structure Of Cytochrome C Peroxidase, N184r Mutant
Length = 294
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 196 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTXYSLIQDPKYLSIVKEYANDQ 255
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 256 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 290
>pdb|1A2F|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 193 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 252
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 253 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 287
>pdb|1CCE|A Chain A, Construction Of A Bis-Aquo Heme Enzyme And Replacement
With Exogenous Ligand
pdb|1CCG|A Chain A, Construction Of A Bis-Aquo Heme Enzyme And Replacement
With Exogenous Ligand
Length = 291
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 193 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 252
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 253 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 287
>pdb|2XIL|A Chain A, The Structure Of Cytochrome C Peroxidase Compound I
Length = 294
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 196 NVFTNEFYLNLLNENWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 255
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 256 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 290
>pdb|1CPG|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
Length = 296
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 7/120 (5%)
Query: 110 IFGRQNVGSLH--GFMYRYLKNMVLNLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVE 165
+ G +G H Y + N+F E +L E ++ + A +QW S+
Sbjct: 173 LMGAHALGKTHLKNSGYEGPQGAANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYM 232
Query: 166 LKEATATMIFD---LTAKKLISYDQEKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+ ++I D L+ K + DQ+K ++ + F +E I+FP D P K L+
Sbjct: 233 MLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 292
>pdb|1CPD|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
pdb|1CPE|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
pdb|1CPF|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical
Of Cytochrome C Peroxidase
Length = 296
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 198 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 257
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 258 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 292
>pdb|3E2N|A Chain A, Engineering Ascorbate Peroxidase Activity Into Cytochrome
C Peroxidase
Length = 287
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 189 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 248
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 249 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 283
>pdb|2IA8|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned
Manganese-Binding Site In Cytochrome C Peroxidase
pdb|2ICV|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned
Manganese-Binding Site In Cytochrome C Peroxidase
Length = 291
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 193 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 252
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 253 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 287
>pdb|2AQD|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,5-
Diaminopyridine
pdb|2AS1|A Chain A, Cytochrome C Peroxidase In Complex With Thiopheneamidine
pdb|2AS2|A Chain A, Cytochrome C Peroxidase In Complex With 2-Iminopiperidine
pdb|2AS3|A Chain A, Cytochrome C Peroxidase In Complex With Phenol
pdb|2AS4|A Chain A, Cytochrome C Peroxidase In Complex With 3-Fluorocatechol
pdb|2AS6|A Chain A, Cytochrome C Peroxidase In Complex With Cyclopentylamine
pdb|2EUN|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,4-
Diaminopyrimidine
pdb|2EUO|A Chain A, Cytochrome C Peroxidase (ccp) In Complex With 1-methyl-1-
Lambda-5-pyridin-3-yl-amine
pdb|2EUP|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2-Amino-5-
Picoline
pdb|2EUQ|A Chain A, Cytochrome C Peroxydase (Ccp) In Complex With 3-
Thienylmethylamine
pdb|2EUR|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 4-
Pyridylcarbinol
pdb|2EUS|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With Benzylamine
pdb|2EUT|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2-Amino-4-
Picoline
pdb|2EUU|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With
1h-Imidazol-2- Ylmethanol
pdb|1AA4|A Chain A, Specificity Of Ligand Binding In A Buried Polar Cavity Of
Cytochrome C Peroxidase
pdb|1CMP|A Chain A, Small Molecule Binding To An Artificially Created Cavity
At The Active Site Of Cytochrome C Peroxidase
pdb|1CMQ|A Chain A, Small Molecule Binding To An Artificially Created Cavity
At The Active Site Of Cytochrome C Peroxidase
pdb|1CMT|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An
Artificial Cavity At The Radical Site Of Cytochrome C
Peroxidase
pdb|1RYC|A Chain A, Cytochrome C Peroxidase W191g From Saccharomyces
Cerevisiae
pdb|2Y5A|A Chain A, Cytochrome C Peroxidase (Ccp) W191g Bound To
3-Aminopyridine
Length = 294
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 196 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 255
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 256 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 290
>pdb|1CCB|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls
The Reduction Potential, Electronic Structure, And
Coupling Of The Tryptophan Free-Radical To The Heme
Length = 297
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 199 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTEYSLIQDPKYLSIVKEYANDQ 258
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 259 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 293
>pdb|1BVA|A Chain A, Manganese Binding Mutant In Cytochrome C Peroxidase
Length = 294
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 196 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 255
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 256 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 290
>pdb|1BEP|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
pdb|1BJ9|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
Length = 291
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 193 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 252
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 253 DKFFKDFSKAFEKLLEDGITFPKDAPSPFIFKTLE 287
>pdb|1EBE|A Chain A, Laue Diffraction Study On The Structure Of Cytochrome C
Peroxidase Compound I
Length = 294
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 196 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 255
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 256 DKFFKDFSKAFEKLLEDGITFPKDAPSPFIFKTLE 290
>pdb|2CEP|A Chain A, Role Of Met-230 In Intramolecular Electron Transfer
Between The Oxyferryl Heme And Trp 191 In Cytochrome C
Peroxidase Compound Ii
Length = 296
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 198 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYIMLPTDYSLIQDPKYLSIVKEYANDQ 257
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 258 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 292
>pdb|4A71|A Chain A, Cytochrome C Peroxidase In Complex With Phenol
Length = 296
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 198 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 257
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 258 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 292
>pdb|1BEQ|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
pdb|1BES|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 193 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 252
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 253 DKFFKDFSKAFEKLLEDGITFPKDAPSPFIFKTLE 287
>pdb|1BEK|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of
Electron Transfer In Cytochrome C Peroxidase
Length = 291
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 193 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 252
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 253 DKFFKDFSKAFEKLLEDGITFPKDAPSPFIFKTLE 287
>pdb|2V2E|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytochrome C
Peroxidase Mutant N184r Y36a
Length = 294
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 196 NVFTNEFYLNLLNENWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 255
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 256 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 290
>pdb|1Z3G|L Chain L, Crystal Structure Of Complex Between Pvs25 And Fab
Fragment Of Malaria Transmission Blocking Antibody 2a8
pdb|1Z3G|M Chain M, Crystal Structure Of Complex Between Pvs25 And Fab
Fragment Of Malaria Transmission Blocking Antibody 2a8
Length = 213
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 33/61 (54%)
Query: 295 LSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVPGIFRK 354
L+++P ++ E + + + S + W + KS T ++I +T++LA+ VP FR
Sbjct: 4 LTQSPAIMSASPGEKVTMTCSASSSVSYMNWYQQKSGTSPKRWIYDTSKLASGVPAHFRG 63
Query: 355 A 355
+
Sbjct: 64 S 64
>pdb|1BEJ|A Chain A, Interaction Between Proximal And Distals Regions Of
Cytochrome C Peroxidase
Length = 291
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 193 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 252
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 253 DKFFKDFSKAFEKLLEDGITFPKDAPSPFIFKTLE 287
>pdb|2V23|A Chain A, Structure Of Cytochrome C Peroxidase Mutant N184r Y36a
pdb|4A6Z|A Chain A, Cytochrome C Peroxidase With Bound Guaiacol
Length = 296
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 198 NVFTNEFYLNLLNENWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 257
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 258 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 292
>pdb|2RBU|X Chain X, Cytochrome C Peroxidase In Complex With
Cyclopentane-Carboximidamide
pdb|2RBV|X Chain X, Cytochrome C Peroxidase In Complex With
(1-Methyl-1h-Pyrrol-2-Yl)- Methylamine
pdb|2RBW|X Chain X, Cytochrome C Peroxidase W191g In Complex With
1,2-dimethyl-1h-pyridin- 5-amine
pdb|2RBY|X Chain X, 1-methyl-5-imidazolecarboxaldehyde In Complex With
Cytochrome C Peroxidase W191g
pdb|2RBZ|X Chain X, Cytochrome C Peroxidase W191g In Complex 3-Methoxypyridine
pdb|2RC0|X Chain X, Cytochrome C Peroxidase W191g In Complex With 2-Imino-4-
Methylpiperdine
pdb|2RC2|X Chain X, Cytochrome C Peroxidase W191g In Complex With
1-Methyl-2-Vinyl- Pyridinium
pdb|2RBT|X Chain X, N-Methylbenzylamine In Complex With Cytochrome C
Peroxidase W191g
pdb|2RBX|X Chain X, Cytochrome C Peroxidase W191g In Complex With
Pyrimidine-2,4,6- Triamine.
pdb|2RC1|X Chain X, Cytochrome C Peroxidase W191g In Complex With
2,4,5-Trimethyl-3- Oxazoline
Length = 292
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 194 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 253
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 254 DKFFKDFSKAFEKLLEDGITFPKDAPSPFIFKTLE 288
>pdb|1SY6|L Chain L, Crystal Structure Of Cd3gammaepsilon Heterodimer In
Complex With Okt3 Fab Fragment
Length = 213
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 33/61 (54%)
Query: 295 LSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVPGIFRK 354
L+++P ++ E + + + S + W + KS T ++I +T++LA+ VP FR
Sbjct: 4 LTQSPAIMSASPGEKVTMTCSASSSVSYMNWYQQKSGTSPKRWIYDTSKLASGVPAHFRG 63
Query: 355 A 355
+
Sbjct: 64 S 64
>pdb|2ANZ|A Chain A, Cytochrome C Peroxidase In Complex With
2,6-Diaminopyridine
pdb|1AC4|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (2,3,4-Trimethyl-1,3-Thiazole)
pdb|1AC8|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (3,4,5-Trimethylthiazole)
pdb|1AEB|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3-
Methylthiazole)
pdb|1AED|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3,4-
Dimethylthiazole)
pdb|1AEE|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Aniline)
pdb|1AEF|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (3-
Aminopyridine)
pdb|1AEG|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (4-
Aminopyridine)
pdb|1AEH|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-Amino-4-
Methylthiazole)
pdb|1AEJ|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (1-
Vinylimidazole)
pdb|1AEK|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Indoline)
pdb|1AEM|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Imidazo[1,2-
A]pyridine)
pdb|1AEN|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-Amino-5-
Methylthiazole)
pdb|1AEO|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (2-
Aminopyridine)
pdb|1AEQ|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (2-Ethylimidazole)
pdb|1AES|A Chain A, Specificity Of Ligand Binding To A Buried Polar Cavity At
The Active Site Of Cytochrome C Peroxidase (Imidazole)
pdb|1AET|A Chain A, Variation In The Strength Of A Ch To O Hydrogen Bond In An
Artificial Protein Cavity (1-Methylimidazole)
pdb|1AEU|A Chain A, Specificity Of Ligand Binding In A Polar Cavity Of
Cytochrome C Peroxidase (2-Methylimidazole)
pdb|1AEV|A Chain A, Introduction Of Novel Substrate Oxidation Into Cytochrome
C Peroxidase By Cavity Complementation: Oxidation Of 2-
Aminothiazole And Covalent Modification Of The Enzyme
(2- Aminothiazole)
Length = 294
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 196 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 255
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 256 DKFFKDFSKAFEKLLEDGITFPKDAPSPFIFKTLE 290
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In
Cytochrome C Peroxidase (Ccp)
Length = 294
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 153 ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQEKSSENLRENFVAFMEGLISFP 209
A +QW S+ + ++I D L+ K + DQ+K ++ + F +E I+FP
Sbjct: 218 ANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFP 277
Query: 210 LDIPGTAYHKCLQ 222
D P K L+
Sbjct: 278 KDAPSPFIFKTLE 290
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding
Variant Of Cytochrome C Peroxidase
Length = 294
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 153 ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQEKSSENLRENFVAFMEGLISFP 209
A +QW S+ + ++I D L+ K + DQ+K ++ + F +E I+FP
Sbjct: 218 ANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFP 277
Query: 210 LDIPGTAYHKCLQ 222
D P K L+
Sbjct: 278 KDAPSPFIFKTLE 290
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C
Peroxidase (Ccp)
Length = 294
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 153 ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQEKSSENLRENFVAFMEGLISFP 209
A +QW S+ + ++I D L+ K + DQ+K ++ + F +E I+FP
Sbjct: 218 ANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFP 277
Query: 210 LDIPGTAYHKCLQ 222
D P K L+
Sbjct: 278 KDAPSPFIFKTLE 290
>pdb|1S6V|A Chain A, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site
Specific Cross-Link
pdb|1S6V|C Chain C, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site
Specific Cross-Link
Length = 294
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 153 ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQEKSSENLRENFVAFMEGLISFP 209
A +QW S+ + ++I D L+ K + DQ+K ++ + F +E I+FP
Sbjct: 218 ANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFP 277
Query: 210 LDIPGTAYHKCLQ 222
D P K L+
Sbjct: 278 KDAPSPFIFKTLE 290
>pdb|1CIY|A Chain A, Insecticidal Toxin: Structure And Channel Formation
Length = 590
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/70 (18%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 127 LKNMVLNLFGPESLRKMLPEVEQVARARLQQWSSQDTVELKEATATMIFDLTAKKLISYD 186
L +++ +FGP L ++EQ+ R+++++ + E + + + + A+ ++
Sbjct: 32 LVDIIWGIFGPSQWDAFLVQIEQLINQRIEEFARNQAISRLEGLSNL-YQIYAESFREWE 90
Query: 187 QEKSSENLRE 196
+ ++ LRE
Sbjct: 91 ADPTNPALRE 100
>pdb|4F33|A Chain A, Crystal Structure Of Therapeutic Antibody Morab-009
pdb|4F33|C Chain C, Crystal Structure Of Therapeutic Antibody Morab-009
pdb|4F33|E Chain E, Crystal Structure Of Therapeutic Antibody Morab-009
pdb|4F33|G Chain G, Crystal Structure Of Therapeutic Antibody Morab-009
pdb|4F3F|A Chain A, Crystal Structure Of Msln7-64 Morab-009 Fab Complex
Length = 213
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 32/58 (55%)
Query: 295 LSENPLVLKQLTEEHEAILKNRENVHSGLTWREYKSMTYTFQFINETARLANIVPGIF 352
L+++P ++ E + + + S + W + KS T ++I +T++LA+ VPG F
Sbjct: 4 LTQSPAIMSASPGEKVTMTCSASSSVSYMHWYQQKSGTSPKRWIYDTSKLASGVPGRF 61
>pdb|2R2J|A Chain A, Crystal Structure Of Human Erp44
Length = 382
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 5/110 (4%)
Query: 91 IFQQEGQLFQSWYPDTFTEIFGRQNVGSLHGFMYRYL--KNMVLNLF--GPESLRKMLPE 146
IF++ + + +P+ +F R + RY K L LF G R+ +
Sbjct: 43 IFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNGXXXKREYRGQ 102
Query: 147 VEQVARAR-LQQWSSQDTVELKEATATMIFDLTAKKLISYDQEKSSENLR 195
A A ++Q S E+++ D + + +I Y ++K S+N R
Sbjct: 103 RSVKALADYIRQQKSDPIQEIRDLAEITTLDRSKRNIIGYFEQKDSDNYR 152
>pdb|2X07|A Chain A, Cytochrome C Peroxidase: Engineered Ascorbate Binding Site
pdb|2X08|A Chain A, Cytochrome C Peroxidase: Ascorbate Bound To The Engineered
Ascorbate Binding Site
Length = 293
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ + ++I D L+ K + DQ
Sbjct: 195 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYANDQ 254
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
++ ++ + F +E I+FP D P K L+
Sbjct: 255 DRFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 289
>pdb|1A2G|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 28.5 bits (62), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 133 NLFGPESLRKMLPEVEQVAR--ARLQQWSSQDTVELKEATATMIFD---LTAKKLISYDQ 187
N+F E +L E ++ + A +QW S+ ++I D L+ K + DQ
Sbjct: 193 NVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMHLPTDYSLIQDPKYLSIVKEYANDQ 252
Query: 188 EKSSENLRENFVAFMEGLISFPLDIPGTAYHKCLQ 222
+K ++ + F +E I+FP D P K L+
Sbjct: 253 DKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLE 287
>pdb|3AII|A Chain A, Archaeal Non-Discriminating Glutamyl-Trna Synthetase From
Methanothermobacter Thermautotrophicus
Length = 553
Score = 28.5 bits (62), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 67/155 (43%), Gaps = 27/155 (17%)
Query: 112 GRQNVGSLHGFMYRYLKNMVLNLFGPESLRKMLPEVEQVARARLQQWSSQDTVELKEATA 171
GR N G++ G + + LRKM P+V++ A +++ +S E ++
Sbjct: 21 GRANPGAVMGAV----------MSNEPELRKMAPQVKEAVEAAVERVNSLSPEEQQQEME 70
Query: 172 TMIFDLTAKKLISYDQEKSSENLRENFVAFMEGLI--------SFPLDIPGTAYHKCLQG 223
+ ++T +K +K + LRE +A ++G + S PL I G A L
Sbjct: 71 RLGLEITERK------QKKRKGLRE--LAGVKGEVVLRFAPNPSGPLHI-GHARAAILNH 121
Query: 224 RERAMKKLKNLLQERRANPRKEQSDFYDYVLKELQ 258
+ +L+ +PR+ + YD + +L+
Sbjct: 122 EYARKYDGRLILRIEDTDPRRVDPEAYDMIPADLE 156
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.137 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,644,029
Number of Sequences: 62578
Number of extensions: 531496
Number of successful extensions: 1955
Number of sequences better than 100.0: 258
Number of HSP's better than 100.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 140
Number of HSP's that attempted gapping in prelim test: 1637
Number of HSP's gapped (non-prelim): 299
length of query: 476
length of database: 14,973,337
effective HSP length: 102
effective length of query: 374
effective length of database: 8,590,381
effective search space: 3212802494
effective search space used: 3212802494
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 53 (25.0 bits)