Query 040771
Match_columns 496
No_of_seqs 324 out of 2222
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 18:53:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040771.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040771hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 4.1E-85 1.4E-89 694.9 42.9 470 22-494 2-514 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 2.5E-82 8.4E-87 672.0 40.1 461 26-493 1-494 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 1.5E-78 5.1E-83 648.0 39.6 466 22-495 6-498 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 1.1E-71 3.6E-76 589.3 34.8 432 26-494 2-473 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 7.9E-69 2.7E-73 569.8 38.3 425 41-492 8-501 (501)
6 2wdx_A Putative hexose oxidase 100.0 7E-66 2.4E-70 551.2 38.4 444 27-492 23-523 (523)
7 2ipi_A Aclacinomycin oxidoredu 100.0 5.3E-65 1.8E-69 544.5 39.6 447 25-493 19-520 (521)
8 2y3s_A TAML; oxidoreductase; H 100.0 1.9E-64 6.6E-69 540.4 39.2 435 42-494 33-529 (530)
9 1zr6_A Glucooligosaccharide ox 100.0 4.6E-64 1.6E-68 535.4 35.8 434 22-494 4-480 (503)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 2.3E-62 7.7E-67 517.8 31.1 419 42-492 13-456 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 2E-39 6.9E-44 348.4 28.5 227 23-266 30-267 (534)
12 4bby_A Alkyldihydroxyacetoneph 100.0 3.9E-34 1.3E-38 313.9 22.4 204 66-270 198-410 (658)
13 3pm9_A Putative oxidoreductase 100.0 5.4E-33 1.8E-37 293.3 18.8 204 65-270 43-253 (476)
14 2vfr_A Xylitol oxidase, aldito 100.0 2E-31 6.9E-36 278.4 29.9 193 65-269 12-208 (422)
15 2uuu_A Alkyldihydroxyacetoneph 100.0 5.1E-32 1.7E-36 292.2 21.1 200 70-270 134-340 (584)
16 2exr_A Cytokinin dehydrogenase 100.0 8.4E-32 2.9E-36 288.0 21.0 202 65-270 53-264 (524)
17 4feh_A Oxidoreductase DPRE1; a 100.0 3.3E-31 1.1E-35 279.9 20.6 197 65-269 35-237 (481)
18 1wvf_A 4-cresol dehydrogenase 100.0 1.3E-30 4.6E-35 279.0 22.7 196 71-270 54-266 (520)
19 2i0k_A Oxidoreductase; MIX alp 100.0 3.9E-30 1.3E-34 277.0 16.7 198 42-249 9-226 (561)
20 1e8g_A Vanillyl-alcohol oxidas 100.0 1.5E-28 5.2E-33 264.9 24.6 199 70-270 67-298 (560)
21 3js8_A Cholesterol oxidase; ch 100.0 2E-29 6.8E-34 266.5 16.1 189 49-248 11-221 (540)
22 1f0x_A DLDH, D-lactate dehydro 100.0 1.5E-28 5.1E-33 263.5 16.7 198 70-270 42-298 (571)
23 3i99_A UDP-N-acetylenolpyruvoy 99.9 1.8E-25 6.1E-30 226.0 13.6 164 71-246 28-199 (357)
24 3tx1_A UDP-N-acetylenolpyruvoy 99.9 1.3E-25 4.3E-30 224.8 11.7 164 71-246 52-217 (322)
25 1hsk_A UDP-N-acetylenolpyruvoy 99.9 9.7E-25 3.3E-29 219.6 11.0 159 71-244 46-209 (326)
26 1uxy_A MURB, uridine diphospho 99.9 7.4E-24 2.5E-28 213.5 17.4 163 72-246 13-183 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.9 7.1E-23 2.4E-27 199.4 11.2 151 72-245 21-173 (268)
28 2yvs_A Glycolate oxidase subun 99.8 2.1E-19 7E-24 170.1 10.5 116 131-252 1-122 (219)
29 1ffv_C CUTM, flavoprotein of c 98.2 1.8E-06 6.3E-11 84.7 8.0 155 73-244 4-177 (287)
30 1n62_C Carbon monoxide dehydro 97.6 9.2E-05 3.1E-09 72.6 7.2 154 73-243 4-176 (288)
31 2w3s_A Xanthine dehydrogenase; 97.3 0.00022 7.4E-09 74.4 5.4 152 76-243 179-345 (462)
32 1t3q_C Quinoline 2-oxidoreduct 96.4 0.0037 1.3E-07 61.0 6.0 152 72-241 3-173 (288)
33 3nvz_B Xanthine dehydrogenase/ 96.2 0.0071 2.4E-07 59.5 7.2 156 73-242 9-189 (305)
34 3hrd_C Nicotinate dehydrogenas 93.4 0.085 2.9E-06 51.5 5.6 75 74-153 3-82 (296)
35 1rm6_B 4-hydroxybenzoyl-COA re 89.2 0.38 1.3E-05 47.4 5.2 76 73-154 5-84 (324)
36 2exr_A Cytokinin dehydrogenase 89.1 0.14 4.6E-06 54.2 2.0 37 457-494 487-523 (524)
37 3unc_A Xanthine dehydrogenase/ 74.9 2.2 7.5E-05 50.0 4.7 78 73-156 232-313 (1332)
38 1wvf_A 4-cresol dehydrogenase 70.8 2.1 7.2E-05 44.9 3.0 27 461-487 483-510 (520)
39 4bby_A Alkyldihydroxyacetoneph 67.0 1.7 5.8E-05 47.1 1.3 28 459-486 626-654 (658)
40 1f0x_A DLDH, D-lactate dehydro 57.7 6.3 0.00022 41.8 3.6 30 466-496 537-566 (571)
41 2i0k_A Oxidoreductase; MIX alp 51.3 6.8 0.00023 41.5 2.6 22 466-487 533-554 (561)
42 1e8g_A Vanillyl-alcohol oxidas 49.5 7.8 0.00027 41.0 2.7 23 465-487 522-544 (560)
43 1xty_A PTH, peptidyl-tRNA hydr 47.2 21 0.00071 29.5 4.4 37 71-107 52-89 (120)
44 4feh_A Oxidoreductase DPRE1; a 39.4 12 0.00042 38.6 2.3 22 466-487 452-473 (481)
45 3zyv_A AOH1; oxidoreductase, m 36.8 25 0.00084 41.3 4.4 79 75-157 241-321 (1335)
46 1wn2_A Peptidyl-tRNA hydrolase 36.3 56 0.0019 26.9 5.4 38 71-108 53-91 (121)
47 3js8_A Cholesterol oxidase; ch 36.0 15 0.00052 38.5 2.3 23 465-487 511-533 (540)
48 3pm9_A Putative oxidoreductase 34.3 12 0.0004 38.8 1.1 29 458-486 443-472 (476)
49 1rlk_A Hypothetical protein TA 33.8 58 0.002 26.5 5.1 38 71-108 49-87 (117)
50 2zv3_A PTH, peptidyl-tRNA hydr 33.3 57 0.0019 26.5 5.0 37 71-107 47-84 (115)
51 1rzw_A Protein AF2095(GR4); be 31.0 68 0.0023 26.5 5.0 37 72-108 47-84 (123)
52 1q7s_A BIT1, protein CGI-147; 27.0 91 0.0031 25.3 5.2 36 72-107 50-86 (117)
53 3fbi_A Mediator of RNA polymer 26.1 19 0.00066 27.7 0.8 18 461-478 22-39 (84)
54 2gvs_A Chemosensory protein CS 25.6 25 0.00085 28.5 1.4 14 472-485 84-97 (109)
55 2uuu_A Alkyldihydroxyacetoneph 23.7 29 0.001 36.7 1.9 22 465-486 559-580 (584)
56 1k19_A Chemosensory protein CS 23.3 28 0.00097 28.3 1.3 14 472-485 82-95 (112)
57 2ohw_A YUEI protein; structura 21.4 1.3E+02 0.0044 25.1 5.1 34 75-108 66-100 (133)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=4.1e-85 Score=694.86 Aligned_cols=470 Identities=47% Similarity=0.880 Sum_probs=394.8
Q ss_pred CCcccHhhhcccCCCCCCCCCCeEEcCCCCChHHHHHhhhcccccccCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEE
Q 040771 22 SNLESFLQCLPQHVQPSNPISDVIFTQNHSNFQSVLNAYIKNRKFLIASTPKPLAILTAKHESHVQATVICAKQAGLELR 101 (496)
Q Consensus 22 ~~~~~~~~~l~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~ 101 (496)
.+.++|.+||+.....+.++++.|++|+|+.|++++++|++|.||+.....+|.+||+|+|++||+++|++|+++++||+
T Consensus 2 ~~~~~f~~c~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~ 81 (518)
T 3vte_A 2 NPRENFLKCFSKHIPNNVANPKLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIR 81 (518)
T ss_dssp CHHHHHHHHHHHHCCC----CCCEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEEE
T ss_pred ChhHHHHHHHHhcCCccCCCCceEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcEE
Confidence 45678999999877777889999999999999999988999999999889999999999999999999999999999999
Q ss_pred EEcCCCCCCCCCcccCCCeEEEEcCCCCCeEEcCCCCEEEEeCCccHHHHHHHHHhcCCccccccCCCCccccccccccC
Q 040771 102 IRSGGHDYDGLSYISTVPFVILDMFNLRSIDIDIANETAWVQAGATLGELYFKIANTSKVHAFPAGVCHSLGVGGHISGG 181 (496)
Q Consensus 102 ~~ggGh~~~g~~~~~~~~g~vIdl~~l~~i~id~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~G~~~~vgvgG~~~gg 181 (496)
+|||||++.+.+.....++++|||++||+|++|+++++++||||+++.+|+++|.++|+++.+++|.|++|||||+++||
T Consensus 82 vrggGh~~~g~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~gG 161 (518)
T 3vte_A 82 TRSGGHDAEGMSYISQVPFVVVDLRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSGG 161 (518)
T ss_dssp EESSCCCTTCTTTCCSSSEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHHTC
T ss_pred EECCCcCCCCCccCCCCCeEEEECCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeCCC
Confidence 99999999987643334699999999999999999999999999999999999999876788899999999999999999
Q ss_pred CCCCCccccccccceeeEEEEEeeCCeEEeccCCCccchhhhccccCCCeEEEEEEEEEEEeeCceeEEEEEeccch-hh
Q 040771 182 GYGNLLRKYGISVDNVIDAQLVDVKGRILNRESMGEDLFWAIRGGGGASFGVILAWKIKLVAVPEKVTLFKVDKTLA-QG 260 (496)
Q Consensus 182 g~g~~s~~~G~~~D~v~~~~vV~~~G~~v~~~~~~~dLf~a~rG~g~g~~GIVt~~t~~l~p~~~~~~~~~~~~~~~-~~ 260 (496)
|+|+++++||+++|+|+++|||++||++++.+.+++|||||+||||+|+|||||+++||++|.|+.+..|.+.+... ++
T Consensus 162 g~G~~s~~~G~~~D~V~~~evV~adG~iv~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~~ 241 (518)
T 3vte_A 162 GYGALMRNYGLAADNIIDAHLVNVDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHG 241 (518)
T ss_dssp CCCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHHH
T ss_pred CCccccCCCCchhheEEEEEEEccCCeEEEeeccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHHH
Confidence 99999999999999999999999999999854567999999999867899999999999999998777777776543 66
Q ss_pred HHHHHHHHHHHCCCCCccceEEEEEEcc-------CC-Ce-ee--------------------------ecCcceecchh
Q 040771 261 ATDVLYKWQYVAPKLPEELFIRVMILVP-------KE-EK-TV--------------------------SPNDCHEMSWG 305 (496)
Q Consensus 261 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~-------~g-~~-~v--------------------------~~~~~~~~~~~ 305 (496)
+.+++.+|+++.+.+|+++++.+.+... .+ +. .+ ...++.+++|+
T Consensus 242 ~~~~l~~~~~~~~~~p~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~w~ 321 (518)
T 3vte_A 242 LVKLFNKWQNIAYKYDKDLVLMTHFITKNITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFSWI 321 (518)
T ss_dssp HHHHHHHHHHHGGGSCTTEEEEEEEEEESCC-------CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEECHH
T ss_pred HHHHHHHHHHHHHcCCHhHeEEEEEcccCCCCCCCcCCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeecchh
Confidence 7899999999999999999988776531 01 11 11 11235567888
Q ss_pred HHHHhhhcCCCCC-cc---hhhhccCCCcccccceeecccccCCCCHhHHHHHHHHHhcC--CCceEEEeecCCccccCC
Q 040771 306 QSTVFFLDSSQNV-TS---IDVLLQRPTEAKISFKAKSDYVKNVIPREGLEEIWKKMIDN--ENMFMQWNPYGGRMSEIS 379 (496)
Q Consensus 306 ~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~gg~v~~~~ 379 (496)
+.+.+++.. +.+ .+ ++.+++++.....+||.||.|+.++++++.++.+++.+.+. +.+.+.++++||+|++++
T Consensus 322 ~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~GGa~~~v~ 400 (518)
T 3vte_A 322 DTTIFYSGV-VNFNTANFKKEILLDRSAGKKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGGIMEEIS 400 (518)
T ss_dssp HHHHHTSSS-CCC-----CGGGGGCTTCSCCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEECCGGGGTSC
T ss_pred hhhhhhhcC-CccCCccchhhhhccCCcCcccceeeechhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeecCccccCCC
Confidence 887776544 221 23 34455554444456788999999889999999999988763 357899999999999999
Q ss_pred CCCCCccccCCceEEEEEEeecCCCCccchHHHHHHHHHHHHhcCCCCCCCCCCcccccCCCCCC-CCCCCCCcchhhhh
Q 040771 380 ESETAFPHRAGNLFLIQYYESWPEEGINATDLYTNKLRDFYDSMAPYVSSNPRNTYLNYRDLDIG-ISSNNQTSLKDAEV 458 (496)
Q Consensus 380 ~~~taf~~R~~~~~~i~~~~~W~~~~~d~~~~~~~w~~~~~~~l~~~~~~~~~~~Y~Nyad~~~~-~~~~~~~s~~~~~~ 458 (496)
.++|||+||++.+|.+++.+.|.++.++ ++..+|++++++.|.|+..+.+.++|+||.|.+++ .+....++++....
T Consensus 401 ~~~TAf~hR~~~~~~~~~~~~w~~~~~~--~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~~~~~~~~~~~~ 478 (518)
T 3vte_A 401 ESAIPFPHRAGIMYELWYTASWEKQEDN--EKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHASPNNYTQARI 478 (518)
T ss_dssp TTSSSCCCCTTCCEEEEEEEEECCTTTH--HHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCCTTSCCCHHHHHH
T ss_pred CCCCcccccCcceEEEEEEEecCCcchh--HHHHHHHHHHHHHhccccCCCCccccccCCCccccccccccccchhhhhh
Confidence 9999999998558999999999876543 67889999999999998765557899999998865 21122334455567
Q ss_pred hcccccCCcHHHHHHHHhccCCCCCCCCCCCCCCCC
Q 040771 459 YGTKYFNGNFKKLVEVKTRFDPDNFFKNEQSIPPGN 494 (496)
Q Consensus 459 ~g~~yyg~n~~RL~~vK~kYDP~nvF~~~~~I~~~~ 494 (496)
|++.|||+||+||++||+||||+|||+++|+|+|.+
T Consensus 479 w~~~Yyg~N~~RL~~vK~~yDP~n~F~~~QsI~p~~ 514 (518)
T 3vte_A 479 WGEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPLP 514 (518)
T ss_dssp HHHHHSSTHHHHHHHHHHHHCTTCCSCCTTCCCCCC
T ss_pred HHHHHhHhHHHHHHHHHhhcCchhcccCCCCCCCCC
Confidence 999999999999999999999999999999999864
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=2.5e-82 Score=672.02 Aligned_cols=461 Identities=40% Similarity=0.746 Sum_probs=386.7
Q ss_pred cHhhhcccCCCCCCCCCCeEEcCCCCChHHHHHhhhcccccccCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcC
Q 040771 26 SFLQCLPQHVQPSNPISDVIFTQNHSNFQSVLNAYIKNRKFLIASTPKPLAILTAKHESHVQATVICAKQAGLELRIRSG 105 (496)
Q Consensus 26 ~~~~~l~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~gg 105 (496)
+|.+||.....++ ++.|++|+|+.|+++++++++|.||+....++|.+||+|+|++||+++|++|+++++|+++|||
T Consensus 1 ~~~~cl~~~~~~~---~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGg 77 (495)
T 3fw9_A 1 DLLSCLTFNGVRN---HTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSG 77 (495)
T ss_dssp CHHHHHHHTTCCC---EEECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEESS
T ss_pred ChhHHHhhcCCCC---CCeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 4899999875432 7889999999999998888999999998899999999999999999999999999999999999
Q ss_pred CCCCCCCCcccCCCeEEEEcCCCCCeEEcCCCCEEEEeCCccHHHHHHHHHhcCCccccccCCCCccccccccccCCCCC
Q 040771 106 GHDYDGLSYISTVPFVILDMFNLRSIDIDIANETAWVQAGATLGELYFKIANTSKVHAFPAGVCHSLGVGGHISGGGYGN 185 (496)
Q Consensus 106 Gh~~~g~~~~~~~~g~vIdl~~l~~i~id~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~G~~~~vgvgG~~~ggg~g~ 185 (496)
|||+.|.+...+.++++|||++|++|++|+++++++||||+++.+|+++|.++++++.+++|.|+++||||+++|||+|+
T Consensus 78 Gh~~~g~~~~~~~ggvvIdl~~m~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg~G~ 157 (495)
T 3fw9_A 78 GHSYEGLSYTSDTPFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFGM 157 (495)
T ss_dssp CCCTTCTTSCCSSCEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCCCCT
T ss_pred CcCCCCccccCCCCeEEEECCCCCcEEEeCCCCEEEEcCCCCHHHHHHHHHHhcCCceeccCCCCCCeEeeeccCCCCcc
Confidence 99999887655446899999999999999999999999999999999999999655888999999999999999999999
Q ss_pred CccccccccceeeEEEEEeeCCeEEeccCCCccchhhhccccCCCeEEEEEEEEEEEeeCceeEEEEEeccch-hhHHHH
Q 040771 186 LLRKYGISVDNVIDAQLVDVKGRILNRESMGEDLFWAIRGGGGASFGVILAWKIKLVAVPEKVTLFKVDKTLA-QGATDV 264 (496)
Q Consensus 186 ~s~~~G~~~D~v~~~~vV~~~G~~v~~~~~~~dLf~a~rG~g~g~~GIVt~~t~~l~p~~~~~~~~~~~~~~~-~~~~~~ 264 (496)
.+++||+.+|+|++++||++||++++++.+++||||++|||++|+|||||+++||++|.|+....+.+.++.. +++.++
T Consensus 158 ~~~~~G~~~D~v~~~~vV~adG~i~~~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~~ 237 (495)
T 3fw9_A 158 MSRKYGLAADNVVDAILIDANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSL 237 (495)
T ss_dssp THHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHHH
T ss_pred cccCCCchhheEEEEEEEcCCCCEEEcCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHHH
Confidence 9999999999999999999999999855568999999999658999999999999999998877777776543 668899
Q ss_pred HHHHHHHCCCCCccceEEEEEEccC------------CCee---------e-----ecCcceecchhHHHHhhhcCCCCC
Q 040771 265 LYKWQYVAPKLPEELFIRVMILVPK------------EEKT---------V-----SPNDCHEMSWGQSTVFFLDSSQNV 318 (496)
Q Consensus 265 ~~~~~~~~~~~p~~~~~~~~~~~~~------------g~~~---------v-----~~~~~~~~~~~~~~~~~~~~~~~~ 318 (496)
+.+|+++++++|+++++.+...... |... + ....+.+++|++.+.++++. +.
T Consensus 238 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~~~~~~~~-~~- 315 (495)
T 3fw9_A 238 LHKWQFVAEELEEDFTLSVLGGADEKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFAYLAGL-ET- 315 (495)
T ss_dssp HHHHHHHHHHSCTTEEEEEEEEEETTEEEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHHTTC-SC-
T ss_pred HHHHHHHHhcCChhHeEEEEEcCCCCceEEEEEEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHHHHHHhcc-cc-
Confidence 9999999888999998776543110 1110 0 12345678888877666543 11
Q ss_pred cchhhhccCCCc-ccccceeecccccCCCCHhHHHHHHHHHhcCCCceEEEeecCCccccCCCCCCCccccCCceEEEEE
Q 040771 319 TSIDVLLQRPTE-AKISFKAKSDYVKNVIPREGLEEIWKKMIDNENMFMQWNPYGGRMSEISESETAFPHRAGNLFLIQY 397 (496)
Q Consensus 319 ~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~v~~~~~~~taf~~R~~~~~~i~~ 397 (496)
.+.++++... +..+||.||.|+.++++++.++.+++.+.+.+.+.++++++||++++++.++|||+||++.+|.+++
T Consensus 316 --~~~l~~~~~~~~~~~~~~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~~~~~GGa~~~v~~~~TAf~hR~~~~~~~~~ 393 (495)
T 3fw9_A 316 --VSQLNNRFLKFDERAFKTKVDLTKEPLPSKAFYGLLERLSKEPNGFIALNGFGGQMSKISSDFTPFPHRSGTRLMVEY 393 (495)
T ss_dssp --GGGGGCTTSCSCCCEEEEEEEECSSCCCHHHHHHHHHHHHHCTTEEEEEEECCGGGGTSCTTTSSCCCCTTCCEEEEE
T ss_pred --hhhhcCCCCCccCcceeEeehhhcCCCCHHHHHHHHHHHhhCCCcEEEecccCCccccCCCCCCCccccCccceEEEE
Confidence 2233443322 2357889999999899999999999988776677899999999999999999999999866899999
Q ss_pred EeecCCCCccchHHHHHHHHHHHHhcCCCCCCCCCCcccccCCCCCCCCCC-----CCCcchhhhhhcccccCCcHHHHH
Q 040771 398 YESWPEEGINATDLYTNKLRDFYDSMAPYVSSNPRNTYLNYRDLDIGISSN-----NQTSLKDAEVYGTKYFNGNFKKLV 472 (496)
Q Consensus 398 ~~~W~~~~~d~~~~~~~w~~~~~~~l~~~~~~~~~~~Y~Nyad~~~~~~~~-----~~~s~~~~~~~g~~yyg~n~~RL~ 472 (496)
.+.|.++..+..++..+|++++++.+.|+..+.++++|+||.|.+++.+.. +.++|+..+.|++.||++||+||+
T Consensus 394 ~~~w~~~~~~~~~~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~w~~~Yyg~n~~RL~ 473 (495)
T 3fw9_A 394 IVAWNQSEQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESYFLSNYERLI 473 (495)
T ss_dssp EEEECGGGGGGHHHHHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHHHHHHHHGGGHHHHH
T ss_pred EEecCCCCcchhHHHHHHHHHHHHHHhhhccCCCcccccCccCccccccccccccccccccchhhhhHHHHhHhHHHHHH
Confidence 999986532234678899999999999997655568999999987642110 012334456799999999999999
Q ss_pred HHHhccCCCCCCCCCCCCCCC
Q 040771 473 EVKTRFDPDNFFKNEQSIPPG 493 (496)
Q Consensus 473 ~vK~kYDP~nvF~~~~~I~~~ 493 (496)
+||+||||+|||+++|+|||.
T Consensus 474 ~vK~~yDP~n~F~~~qsI~p~ 494 (495)
T 3fw9_A 474 RAKTLIDPNNVFNHPQSIPPM 494 (495)
T ss_dssp HHHHHHCTTCCSCCTTCCCCC
T ss_pred HHHHhhCcHhhCCCCCCCCCC
Confidence 999999999999999999985
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=1.5e-78 Score=647.98 Aligned_cols=466 Identities=43% Similarity=0.811 Sum_probs=378.6
Q ss_pred CCcccHhhhcccCCCCCCCCCCeEEcCCCCChHHHHHhhhcccccccCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEE
Q 040771 22 SNLESFLQCLPQHVQPSNPISDVIFTQNHSNFQSVLNAYIKNRKFLIASTPKPLAILTAKHESHVQATVICAKQAGLELR 101 (496)
Q Consensus 22 ~~~~~~~~~l~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~ 101 (496)
+..++|.+||.+.+. ++.|++|+|+.|...+.++.+|.||+.....+|.+||+|+|++||+++|++|+++++||+
T Consensus 6 ~~~~~f~~~L~~~~~-----~~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~~ 80 (500)
T 3tsh_A 6 AAKEDFLGCLVKEIP-----PRLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRIR 80 (500)
T ss_dssp ---CHHHHHHHHHSC-----GGGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCEEE
T ss_pred ccHHHHHHHHHhhCC-----CCEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcEE
Confidence 467889999999764 567999999999999999999999999889999999999999999999999999999999
Q ss_pred EEcCCCCCCCCCccc--CCCeEEEEcCCCCCeEEcCCCCEEEEeCCccHHHHHHHHHhcCCccccccCCCCccccccccc
Q 040771 102 IRSGGHDYDGLSYIS--TVPFVILDMFNLRSIDIDIANETAWVQAGATLGELYFKIANTSKVHAFPAGVCHSLGVGGHIS 179 (496)
Q Consensus 102 ~~ggGh~~~g~~~~~--~~~g~vIdl~~l~~i~id~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~G~~~~vgvgG~~~ 179 (496)
+|||||++.|.+... .+++++|||++||+|++|+++++++||||++|++|+++|.++|+.+++++|.|++|||||+++
T Consensus 81 ~r~gGh~~~g~s~~~~~~~~~~~idl~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~ 160 (500)
T 3tsh_A 81 VRSGGHDYEGLSYRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFA 160 (500)
T ss_dssp EESSCCCTTCTTTCCSSSCCEEEEECTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHH
T ss_pred EEcCCcCCCCCcCCCCCcCCeEEEECcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCccc
Confidence 999999998876432 235899999999999999999999999999999999999999988888999999999999999
Q ss_pred cCCCCCCccccccccceeeEEEEEeeCCeEEeccCCCccchhhhccccCCCeEEEEEEEEEEEeeCceeEEEEEeccchh
Q 040771 180 GGGYGNLLRKYGISVDNVIDAQLVDVKGRILNRESMGEDLFWAIRGGGGASFGVILAWKIKLVAVPEKVTLFKVDKTLAQ 259 (496)
Q Consensus 180 ggg~g~~s~~~G~~~D~v~~~~vV~~~G~~v~~~~~~~dLf~a~rG~g~g~~GIVt~~t~~l~p~~~~~~~~~~~~~~~~ 259 (496)
|||+|+++++||+++|||+++|||++||++++.+.+++|||||+||||+|+|||||++|||++|.|+.+..+...+...+
T Consensus 161 ~gg~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~~ 240 (500)
T 3tsh_A 161 GGGFGMLLRKYGIAAENVIDVKLVDANGKLHDKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSE 240 (500)
T ss_dssp TCCCCTTHHHHCCGGGGEEEEEEECTTSCEECHHHHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETTT
T ss_pred cccCCccccccCChhhheeeEEEECCCceEEECCCCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcHH
Confidence 99999999999999999999999999999998666789999999988788999999999999999998777776666566
Q ss_pred hHHHHHHHHHHHCCCCCccceEEEEEEcc--------CCCee--------------eecCcceecchhHHHHhhhcCCCC
Q 040771 260 GATDVLYKWQYVAPKLPEELFIRVMILVP--------KEEKT--------------VSPNDCHEMSWGQSTVFFLDSSQN 317 (496)
Q Consensus 260 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~--------~g~~~--------------v~~~~~~~~~~~~~~~~~~~~~~~ 317 (496)
.+.+++.+|+.+.+.+|+++...+..... .|... .....+..+.|++...++... ..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~ 319 (500)
T 3tsh_A 241 GAVDIINKWQVVAPQLPADLMIRIIAQGPKATFEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEMSWIQSIPFVHLG-HR 319 (500)
T ss_dssp THHHHHHHHHHHGGGSCTTEEEEEEESSSEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHHHHC-CS
T ss_pred HHHHHHHHHHHhhhccChhhEEEEEecCCCcEEEEEEecchhhhhhhhhhcchhccCCccccchhhhhccchhhhhc-cc
Confidence 78899999999998999998776654311 01100 011223344555544433221 11
Q ss_pred CcchhhhccCCCcccccceeecccccCCCCHhHHHHHHHHHhcCC-CceEEEeecCCccccCCCCCCCccccCCceEEEE
Q 040771 318 VTSIDVLLQRPTEAKISFKAKSDYVKNVIPREGLEEIWKKMIDNE-NMFMQWNPYGGRMSEISESETAFPHRAGNLFLIQ 396 (496)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gg~v~~~~~~~taf~~R~~~~~~i~ 396 (496)
......++++......+.+.++.++.+.++++.++.+++.+...+ ...+.++++||++++++.++++|+||++.++.++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gga~~~~~~~ata~~~R~~~l~~i~ 399 (500)
T 3tsh_A 320 DALEDDLLNRQNSFKPFAEYKSDYVYQPFPKTVWEQILNTWLVKPGAGIMIFDPYGATISATPESATPFPHRKGVLFNIQ 399 (500)
T ss_dssp SCHHHHHHCCCCCCCCEEEEEEEEECSCCCHHHHHHHHHTGGGSTTCCEEEEEECCHHHHHSCTTSSSCCCCTTCCEEEE
T ss_pred cccccccccccccccchhhhhhhhhcccCcHHHHHHHHHHhhcCCCceEEEEcccCccccCCCCccCcCcccCCcEEEEE
Confidence 111122233322223344556777777888888888887765544 5677889999999999999999999997788899
Q ss_pred EEeecCCCCccchHHHHHHHHHHHHhcCCCCCCCCCCcccccCCCCCCCCCC--CCCcchhhhhhcccccCCcHHHHHHH
Q 040771 397 YYESWPEEGINATDLYTNKLRDFYDSMAPYVSSNPRNTYLNYRDLDIGISSN--NQTSLKDAEVYGTKYFNGNFKKLVEV 474 (496)
Q Consensus 397 ~~~~W~~~~~d~~~~~~~w~~~~~~~l~~~~~~~~~~~Y~Nyad~~~~~~~~--~~~s~~~~~~~g~~yyg~n~~RL~~v 474 (496)
+...|.+++++ +...+|++++++.+.++..+.+.++|+||+|.+++.... ...++...+.|++.|||+||+||++|
T Consensus 400 ~~~~w~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~~~w~~~Y~g~Ny~RL~~I 477 (500)
T 3tsh_A 400 YVNYWFAPGAA--AAPLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQKYFKGNFERLAIT 477 (500)
T ss_dssp EEEEECSTTCC--HHHHHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCCCCEETTEECHHHHHHHHHHHHGGGHHHHHHH
T ss_pred EEEecCCcchh--HHHHHHHHHHHHHHHHHhcCCCCeEEeccccccccccccccccccccccchHHHHhhhHHHHHHHHH
Confidence 99999988865 678899999999999987766678999999988753210 01122345689999999999999999
Q ss_pred HhccCCCCCCCCCCCCCCCCC
Q 040771 475 KTRFDPDNFFKNEQSIPPGNL 495 (496)
Q Consensus 475 K~kYDP~nvF~~~~~I~~~~~ 495 (496)
|+||||+|+|+++|+|||..+
T Consensus 478 K~kyDP~nvF~~~qsI~Pl~~ 498 (500)
T 3tsh_A 478 KGKVDPTDYFRNEQSIPPLIK 498 (500)
T ss_dssp HHHHCTTCCSCCTTSCCCCCC
T ss_pred HHHhCcccccCCCCCCCCCCC
Confidence 999999999999999999754
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=1.1e-71 Score=589.32 Aligned_cols=432 Identities=25% Similarity=0.443 Sum_probs=341.9
Q ss_pred cHhhhcccCCCCCCCCCCeEEcCCCCChHHHHHhhhcccccccCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcC
Q 040771 26 SFLQCLPQHVQPSNPISDVIFTQNHSNFQSVLNAYIKNRKFLIASTPKPLAILTAKHESHVQATVICAKQAGLELRIRSG 105 (496)
Q Consensus 26 ~~~~~l~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~gg 105 (496)
+|.+||.++. ..|++|+|+.|+++++ +|+......|.+||+|+|++||+++|++|+++++|+++|||
T Consensus 2 ~l~~cl~~~~-------~~v~~p~~~~y~~~~~------~~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~gg 68 (473)
T 3rja_A 2 AIEACLSAAG-------VPIDIPGTADYERDVE------PFNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSG 68 (473)
T ss_dssp HHHHHHHHTT-------CCBCCTTSHHHHHHTC------CSBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESS
T ss_pred hHHHHHHhCC-------CcEECCCCCchHHHHH------HhhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcC
Confidence 5789999964 3599999999998753 45555568999999999999999999999999999999999
Q ss_pred CCCCCCCCcccCCCeEEEEcCCCCCeE-EcCCCCEEEEeCCccHHHHHHHHHhcCCccccccCCCCccccccccccCCCC
Q 040771 106 GHDYDGLSYISTVPFVILDMFNLRSID-IDIANETAWVQAGATLGELYFKIANTSKVHAFPAGVCHSLGVGGHISGGGYG 184 (496)
Q Consensus 106 Gh~~~g~~~~~~~~g~vIdl~~l~~i~-id~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~G~~~~vgvgG~~~ggg~g 184 (496)
|||+.+.+....+++++|||++||+|. +|+++.+++||||+++.+|+++|.++| .+.+|.|.|+++||||+++|||+|
T Consensus 69 Gh~~~g~~~~~~~~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G-~~~~p~G~~~~vgvgG~~~ggg~G 147 (473)
T 3rja_A 69 GHSYASFGFGGENGHLMVQLDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKY-GRAISHGTCPGVGISGHFAHGGFG 147 (473)
T ss_dssp CCCTTCGGGTSSSSCEEEECTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHH-SEECCCCSCTTCBHHHHHHTCCCC
T ss_pred CCCCCCCcccCCCCeEEEECCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcC-CEEeccCCCCCcEeeeeccCCCCC
Confidence 999986544333457999999999997 999999999999999999999999998 366788999999999999999999
Q ss_pred CCccccccccceeeEEEEEeeCCeEEe-ccCCCccchhhhccccCCCeEEEEEEEEEEEeeCceeEEEEEeccch--hhH
Q 040771 185 NLLRKYGISVDNVIDAQLVDVKGRILN-RESMGEDLFWAIRGGGGASFGVILAWKIKLVAVPEKVTLFKVDKTLA--QGA 261 (496)
Q Consensus 185 ~~s~~~G~~~D~v~~~~vV~~~G~~v~-~~~~~~dLf~a~rG~g~g~~GIVt~~t~~l~p~~~~~~~~~~~~~~~--~~~ 261 (496)
+.+++||+++|+|+++|||++||++++ +..+++||||++||| +|+|||||+++||++|.|+....+.+.+++. +++
T Consensus 148 ~~~~~~G~~~D~v~~~~vV~a~G~v~~~~~~~~~dLf~a~rG~-~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~ 226 (473)
T 3rja_A 148 FSSHMHGLAVDSVVGVTVVLADGRIVEASATENADLFWGIKGA-GSNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTSA 226 (473)
T ss_dssp TTHHHHCCGGGGEEEEEEECTTSCEEEEETTBSHHHHHHHHHH-GGGTCEEEEEEEECEECCSCEEEEEEECCCCSHHHH
T ss_pred cccccccchHhheeeEEEEecCCeEEEeCCCCCcchhhcccCC-CCceEEEEEEEEEEEeCCCceEEEEEEecCccHHHH
Confidence 999999999999999999999999998 556689999999999 6899999999999999998777777777653 347
Q ss_pred HHHHHHHHHHCC-CCCccceEEEEEEcc---------CCCee-----e----------ecCcce-ecchhHHHHhhhcCC
Q 040771 262 TDVLYKWQYVAP-KLPEELFIRVMILVP---------KEEKT-----V----------SPNDCH-EMSWGQSTVFFLDSS 315 (496)
Q Consensus 262 ~~~~~~~~~~~~-~~p~~~~~~~~~~~~---------~g~~~-----v----------~~~~~~-~~~~~~~~~~~~~~~ 315 (496)
.+++.+|+++.. ++|+++++.+.+... .|... + ....+. +++|++....+...
T Consensus 227 ~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~pl~~~~p~~~~~~~~~~~~~~~~~~~~~~~- 305 (473)
T 3rja_A 227 LKGIEAVEDYARWVAPREVNFRIGDYGAGNPGIEGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTSLNWIESVLSYSNF- 305 (473)
T ss_dssp HHHHHHHHHHHHHTCCTTEEEEEEESSSSCCEEEEEEESCHHHHHHHHHHHHTTSCTTCEECCCEEECHHHHHHHTSSS-
T ss_pred HHHHHHHHHHhhhCCChhHEEEEEEcCCCcEEEEEEecCCHHHHHHHHHHHHHhCCCCcceeeecccCHHHHHHhhhcC-
Confidence 789999999877 799999887766411 01100 0 012234 56676655443321
Q ss_pred CCCcchhhhccCCCcccccceeecccccCCCCHhHHHHHHHHHhcC-C-----CceEEEeecCC---ccccCCCCCCCcc
Q 040771 316 QNVTSIDVLLQRPTEAKISFKAKSDYVKNVIPREGLEEIWKKMIDN-E-----NMFMQWNPYGG---RMSEISESETAFP 386 (496)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~gg---~v~~~~~~~taf~ 386 (496)
.+.+... +.. ...++.+|.+.. ++++++++.+++.+.+. + .+.++++++|| ++++++.++|||+
T Consensus 306 ---~~~~~~~--~~~-~~~~~~ks~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai~~v~~~~TAf~ 378 (473)
T 3rja_A 306 ---DHVDFIT--PQP-VENFYAKSLTLK-SIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNSQVTKVTNAETAYP 378 (473)
T ss_dssp ---SCCCCSS--CCC-CBEEEEEEEEES-CCTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTCGGGGSCTTTSSCC
T ss_pred ---CCccccc--CCC-CCcceEeccccC-CCCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcchhhcCCCCCCCccc
Confidence 0000000 000 234667887754 69999999999887542 1 23578999998 7888999999999
Q ss_pred ccCCceEEEEEEeecCC-CCccchHHHHHHHHHHHHhcCCCCCCCCCCcccccCCCCCCCCCCCCCcchhhhhhcccccC
Q 040771 387 HRAGNLFLIQYYESWPE-EGINATDLYTNKLRDFYDSMAPYVSSNPRNTYLNYRDLDIGISSNNQTSLKDAEVYGTKYFN 465 (496)
Q Consensus 387 ~R~~~~~~i~~~~~W~~-~~~d~~~~~~~w~~~~~~~l~~~~~~~~~~~Y~Nyad~~~~~~~~~~~s~~~~~~~g~~yyg 465 (496)
||+ ..|.+++...|.+ +..+ +...+|++++++.+.+.......++|+||+|.+++ ...|++.|||
T Consensus 379 hR~-~~~~~~~~~~w~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~-----------~~~~~~~yyg 444 (473)
T 3rja_A 379 HRD-KLWLIQFYDRYDNNQTYP--ETSFKFLDGWVNSVTKALPKSDWGMYINYADPRMD-----------RDYATKVYYG 444 (473)
T ss_dssp CTT-CSEEEEEEEEECTTSCCC--TTTHHHHHHHHHHHHTTSCGGGEECCGGGCCCSSC-----------HHHHHHHHHG
T ss_pred cCC-ccEEEEEEEEeCCCCccc--hHHHHHHHHHHHHHHhhCCCCCCceEecCCCcccc-----------chhHHHHHHH
Confidence 999 6899999999964 3322 34457777666666443322234799999998753 1358999999
Q ss_pred CcHHHHHHHHhccCCCCCCCCCCCCCCCC
Q 040771 466 GNFKKLVEVKTRFDPDNFFKNEQSIPPGN 494 (496)
Q Consensus 466 ~n~~RL~~vK~kYDP~nvF~~~~~I~~~~ 494 (496)
+||+||++||+||||+|+|+++|+|+|.+
T Consensus 445 ~n~~RL~~vK~kyDP~n~F~~~qsI~p~~ 473 (473)
T 3rja_A 445 ENLARLQKLKAKFDPTDRFYYPQAVRPVK 473 (473)
T ss_dssp GGHHHHHHHHHHHCTTCTTCCTTSCCCCC
T ss_pred HHHHHHHHHhhccCchhhCCCCcCCCCCC
Confidence 99999999999999999999999999864
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=7.9e-69 Score=569.84 Aligned_cols=425 Identities=23% Similarity=0.403 Sum_probs=324.7
Q ss_pred CCCeEEcCCCCChHHHHHhhhcccccccCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCcccCCCe
Q 040771 41 ISDVIFTQNHSNFQSVLNAYIKNRKFLIASTPKPLAILTAKHESHVQATVICAKQAGLELRIRSGGHDYDGLSYISTVPF 120 (496)
Q Consensus 41 ~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~g 120 (496)
+++.|++|+|+.|+++++ .||.|| ...|.+||+|+|++||+++|++|+++++||++|||||++.+.+... +++
T Consensus 8 ~~~~~~~p~~~~y~~~~~--~~n~~~----~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~-~~g 80 (501)
T 3pop_A 8 VPPFTVGREDPRYIELSH--SDNHRF----VVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTP-RRD 80 (501)
T ss_dssp -CCEEEETTSTTHHHHTC--CSCTTS----CCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSS-CCS
T ss_pred CCCceECCCCcchHHHHH--HHhhcc----CCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccC-CCE
Confidence 478899999999998864 345555 5899999999999999999999999999999999999998876532 258
Q ss_pred EEEEcCCCCCeEEcCCCCEEEEeCCccHHHHHHHHHh-cCCccccccCCCCccccccccccCCCCCCccccccccceeeE
Q 040771 121 VILDMFNLRSIDIDIANETAWVQAGATLGELYFKIAN-TSKVHAFPAGVCHSLGVGGHISGGGYGNLLRKYGISVDNVID 199 (496)
Q Consensus 121 ~vIdl~~l~~i~id~~~~~v~v~aG~~~~~l~~~l~~-~g~~l~~~~G~~~~vgvgG~~~ggg~g~~s~~~G~~~D~v~~ 199 (496)
++|||++||+|++|+++++++||||+++.+|+++|.+ +| +.++.|.|++|||||+++|||+|+++++||+++|+|++
T Consensus 81 vvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~ 158 (501)
T 3pop_A 81 LVLDLHNLHAIGPAADGAGVRVGSGATVDQVQKALFRRWN--AALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHLHA 158 (501)
T ss_dssp EEEECTTCCCEEECTTSSSEEEETTCBHHHHHHHHHHHHS--BCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEEE
T ss_pred EEEEecccCCeEEcCCCCEEEEECCcCHHHHHHHHHhhcC--eEeCCCCCCCceEeeccccCCCcccccccccHHHhEEE
Confidence 9999999999999999999999999999999999974 67 67889999999999999999999999999999999999
Q ss_pred EEEEe--eCCe--EEec----cCCCccchhhhccccCCCeEEEEEEEEEE----------EeeC-ceeEEEEEeccch--
Q 040771 200 AQLVD--VKGR--ILNR----ESMGEDLFWAIRGGGGASFGVILAWKIKL----------VAVP-EKVTLFKVDKTLA-- 258 (496)
Q Consensus 200 ~~vV~--~~G~--~v~~----~~~~~dLf~a~rG~g~g~~GIVt~~t~~l----------~p~~-~~~~~~~~~~~~~-- 258 (496)
+|||+ +||+ +++. ..+|+|||||+||||+|+|||||+++||+ +|.+ ..+..+.+.++..
T Consensus 159 ~evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~~~~~ 238 (501)
T 3pop_A 159 VEVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWAMI 238 (501)
T ss_dssp EEEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEEGGGC
T ss_pred EEEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEchhhc
Confidence 99999 8899 4442 35679999999998679999999999999 6654 3455555555432
Q ss_pred --hhHHHHHHHHHHHCC--CCCcc----ceEEEEEEcc-CCCeee------ecCc-----------------------ce
Q 040771 259 --QGATDVLYKWQYVAP--KLPEE----LFIRVMILVP-KEEKTV------SPND-----------------------CH 300 (496)
Q Consensus 259 --~~~~~~~~~~~~~~~--~~p~~----~~~~~~~~~~-~g~~~v------~~~~-----------------------~~ 300 (496)
+.+.+++..|+++.. ..|++ +...+.+... .+...+ ...+ +.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~p~~~~~ 318 (501)
T 3pop_A 239 DETSFVTVMRRFFEWHERHSEPGSPESSLFATFFVNHVSSGVLQLMVQQDADVDPEGEILARFVASLTEGTGVVGIPRGG 318 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCTTCGGGGEEEEEEEECGGGCEEEEEEEEETTTCTTCHHHHHHHHHHHTTSSCCCEEEEE
T ss_pred CHHHHHHHHHHHHHHHhhccCCCccccceEEEEEecCCCCCeEEEEEEEeCChHHHHHHHHHHHHhhhhccCCCccceeE
Confidence 234577887777543 34544 2222222211 111111 0000 12
Q ss_pred ecchhHHHHhhhcCCCCCcchhhhccCCCcccccceeecccccCCCCHhHHHHHHHHHhcC---CCceEEEeecCCcccc
Q 040771 301 EMSWGQSTVFFLDSSQNVTSIDVLLQRPTEAKISFKAKSDYVKNVIPREGLEEIWKKMIDN---ENMFMQWNPYGGRMSE 377 (496)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~gg~v~~ 377 (496)
.++|++....+. . +...+ ....+++.++.|+.++++++.++.+++.+... +.+.+.++++||++++
T Consensus 319 ~~~~~~~~~~~~-~-~~~~~---------~~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~GGav~~ 387 (501)
T 3pop_A 319 VMSWLTGTRYMS-Q-ADCGD---------VMGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVMFNSYGGEINR 387 (501)
T ss_dssp EEEHHHHHHHTC-B-CSCGG---------GTTCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTEEEEEEECCGGGGG
T ss_pred EeCHHHHHhhhc-C-CCCCc---------ccccccceecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEecCccccc
Confidence 233333222110 0 00000 00124677888988889999999999988653 2567889999999999
Q ss_pred CCCCCCCccccCCceEEEEEEeecCCCCccchHHHHHHHHHHHHhcCCCCCC------CCCCcccccCCCCCCCCCCCCC
Q 040771 378 ISESETAFPHRAGNLFLIQYYESWPEEGINATDLYTNKLRDFYDSMAPYVSS------NPRNTYLNYRDLDIGISSNNQT 451 (496)
Q Consensus 378 ~~~~~taf~~R~~~~~~i~~~~~W~~~~~d~~~~~~~w~~~~~~~l~~~~~~------~~~~~Y~Nyad~~~~~~~~~~~ 451 (496)
++.++|||+||+ ..|.+++...|.++..+ ++..+|++++++.+.++..+ ...++|+||+|.+++..+ ..+
T Consensus 388 v~~~~TAf~hR~-~~~~~~~~~~w~~~~~~--~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~dl~~~~-~~~ 463 (501)
T 3pop_A 388 RGPSDAAVPQRD-SVVKSSWFSAWQDAELD--ELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDADLLDPA-RNR 463 (501)
T ss_dssp SCTTTSSCCCCS-CSEEEEEEEEESCGGGH--HHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCCGGGGCTT-TCC
T ss_pred CCCCCCCccCcC-ccEEEEEEEEeCCcchH--HHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCCccccccc-ccc
Confidence 999999999998 78999999999876543 67889999999999765421 245899999998753200 011
Q ss_pred cchhhhhhcccccCCcHHHHHHHHhccCCCCCCCCCCCCCC
Q 040771 452 SLKDAEVYGTKYFNGNFKKLVEVKTRFDPDNFFKNEQSIPP 492 (496)
Q Consensus 452 s~~~~~~~g~~yyg~n~~RL~~vK~kYDP~nvF~~~~~I~~ 492 (496)
| ...|++.|||+||+||++||+||||+|+|+++|||+|
T Consensus 464 ~---~~~w~~~Yyg~N~~RL~~vK~kyDP~n~F~~~qsI~p 501 (501)
T 3pop_A 464 S---GEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSIGL 501 (501)
T ss_dssp S---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred c---cchHHHHHhHhHHHHHHHHHHHhCcccccCCCCCCCC
Confidence 1 2349999999999999999999999999999999997
No 6
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=7e-66 Score=551.19 Aligned_cols=444 Identities=25% Similarity=0.403 Sum_probs=321.6
Q ss_pred HhhhcccCCCCCCCCCCeEEcCCCCChHHHHHhhhcccccccCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCC
Q 040771 27 FLQCLPQHVQPSNPISDVIFTQNHSNFQSVLNAYIKNRKFLIASTPKPLAILTAKHESHVQATVICAKQAGLELRIRSGG 106 (496)
Q Consensus 27 ~~~~l~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~ggG 106 (496)
-..||... .+.|++|+|+.|++++ +..||.||. ..|.+||+|+|++||+++|++|+++++||.+||||
T Consensus 23 ~~~~l~~~-------~~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggG 90 (523)
T 2wdx_A 23 GERCLPPA-------GPVKVTPDDPRYLNLK-LRGANSRFN----GEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGG 90 (523)
T ss_dssp ---CCCCC-------CCEEECTTSTTHHHHH-TCSSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSC
T ss_pred chhhcccC-------CCeEECCCCcchHHHH-hhhhhhccc----CCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCC
Confidence 34898884 4579999999999986 235677774 78999999999999999999999999999999999
Q ss_pred CCCCCCCcccCCCeEEEEcCCCCCeEEcCCCCEEEEeCCccHHHHHHHHHh-cCCccccccCCCCccccccccccCCCCC
Q 040771 107 HDYDGLSYISTVPFVILDMFNLRSIDIDIANETAWVQAGATLGELYFKIAN-TSKVHAFPAGVCHSLGVGGHISGGGYGN 185 (496)
Q Consensus 107 h~~~g~~~~~~~~g~vIdl~~l~~i~id~~~~~v~v~aG~~~~~l~~~l~~-~g~~l~~~~G~~~~vgvgG~~~ggg~g~ 185 (496)
|++.+.+... .++++|||++||+|++|+++.+|+||||++|.+|+++|.+ +| +.++.|.|++|||||+++|||+|+
T Consensus 91 h~~~g~~~~~-~~gvvIdl~~m~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~ 167 (523)
T 2wdx_A 91 HCFEDFVDNP-DVKVIIDMSLLTEIAYDPSMNAFLIEPGNTLSEVYEKLYLGWN--VTIPGGVCGGVGVGGHICGGGYGP 167 (523)
T ss_dssp CCSSSSSSST-TCCEEEECTTCCCEEEETTTTEEEECTTCBHHHHHHHHHHHHS--CCCCCCCCTTCBHHHHHHHTCCCT
T ss_pred CCCCCCccCC-CCeEEEEcccCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHhcC--eEEccCCCCCCeeCccccCCCCCc
Confidence 9998875432 2489999999999999999999999999999999999984 88 677889999999999999999999
Q ss_pred CccccccccceeeEEEEEeeC--CeEEe---ccC-CCcc--chhhhccccCCCeEEEEEEEEEE-----------EeeCc
Q 040771 186 LLRKYGISVDNVIDAQLVDVK--GRILN---RES-MGED--LFWAIRGGGGASFGVILAWKIKL-----------VAVPE 246 (496)
Q Consensus 186 ~s~~~G~~~D~v~~~~vV~~~--G~~v~---~~~-~~~d--Lf~a~rG~g~g~~GIVt~~t~~l-----------~p~~~ 246 (496)
++++||+++|+|+++|||++| |++++ +.. +++| ||||+||||+|+|||||+++||+ +|.|+
T Consensus 168 ~s~~~G~~~D~v~~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~ 247 (523)
T 2wdx_A 168 LSRQFGSVVDYLYAVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPP 247 (523)
T ss_dssp THHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCC
T ss_pred ccccccChhheEEEEEEEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCc
Confidence 999999999999999999965 99753 222 4555 99999987679999999999999 99876
Q ss_pred -eeEEEEEeccch----hhHHHHHHHHHHHCC--CCCcc----ceEEEEEEcc-CC--Ceee------ecCcceecchhH
Q 040771 247 -KVTLFKVDKTLA----QGATDVLYKWQYVAP--KLPEE----LFIRVMILVP-KE--EKTV------SPNDCHEMSWGQ 306 (496)
Q Consensus 247 -~~~~~~~~~~~~----~~~~~~~~~~~~~~~--~~p~~----~~~~~~~~~~-~g--~~~v------~~~~~~~~~~~~ 306 (496)
.+..+.+.++.. +...++++.|+++.. ..|++ +...+.+... .+ ...+ ..........++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~l~ 327 (523)
T 2wdx_A 248 ATLLTSTVTFDWAGMTEAAFSRLLRNHGEWYERNSGPDSPYTGLWSQLMIGNEVPGMGESGFMMPIQVDATRPDARRLLD 327 (523)
T ss_dssp SEEEEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECCCTTCTTCSEEEEEEEETTSTTHHHHHH
T ss_pred ccEEEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCccccceEEEEEeccCCCCCcceeEEEEEEEeCCHHHHHHHHH
Confidence 344555655432 234577777777543 24655 2332222221 12 1111 000000000111
Q ss_pred HHHh-hhc-CC-CCC-----cchhhhccCCCcccccceeecccccCCCCHhHHHHHHHHHhcC---CCceEEEeecCCcc
Q 040771 307 STVF-FLD-SS-QNV-----TSIDVLLQRPTEAKISFKAKSDYVKNVIPREGLEEIWKKMIDN---ENMFMQWNPYGGRM 375 (496)
Q Consensus 307 ~~~~-~~~-~~-~~~-----~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~gg~v 375 (496)
.+.. +.. .. +.. .++............+++.++.++.+.++++.++.+++.+... +.+.+.++++||++
T Consensus 328 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~v 407 (523)
T 2wdx_A 328 AHIEAVIDGVPPAEVPEPIEQRWLASTPGRGGRGPASKTKAGYLRKRLTDRQIQAVYENMTHMDGIDYGAVWLIGYGGKV 407 (523)
T ss_dssp HHHHHHHTTCTTCBCCCCEEEETTSSCCCCCSSCCEEEEEEEEESSCCCHHHHHHHHHHHTCCTTCSEEEEEEEECCGGG
T ss_pred HHHHHHHhhcCCCccccceeccHHHHHHhhcCCCCceeeecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEecCCcc
Confidence 1100 100 00 000 0110000000000113455677776678889999998887653 24567889999999
Q ss_pred ccCCCCCCCccccCCceEEEEEEeecCCCCccchHHHHHHHHHHHHhcCCCCCC------CCCCcccccCCCCCCCCCCC
Q 040771 376 SEISESETAFPHRAGNLFLIQYYESWPEEGINATDLYTNKLRDFYDSMAPYVSS------NPRNTYLNYRDLDIGISSNN 449 (496)
Q Consensus 376 ~~~~~~~taf~~R~~~~~~i~~~~~W~~~~~d~~~~~~~w~~~~~~~l~~~~~~------~~~~~Y~Nyad~~~~~~~~~ 449 (496)
++++.++++|+||+ ..+.+++...|.++.++ +...+|++++++.+.....+ ...++|+||+|.+++. +.-
T Consensus 408 ~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~~~--~~~~~~~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~-~~~ 483 (523)
T 2wdx_A 408 NTVDPAATALPQRD-AILKVNYITGWANPGNE--AKHLTWVRKLYADVYAETGGVPVPNDVSDGAYINYPDSDLAD-PGL 483 (523)
T ss_dssp GGSCTTTSSCCCCS-CSEEEEEEEEESSGGGH--HHHHHHHHHHHHHHTGGGTTSCCSCSSBCCCCTTSCCGGGGC-TTT
T ss_pred ccCCCccccccccC-ceEEEEEEEEcCCCccH--HHHHHHHHHHHHHHHhhhcCCCccCCCCCcceecCCcccccc-ccc
Confidence 99999999999999 78889999999876644 67889999999988732211 1247999999976421 000
Q ss_pred CCcchhhhhhcccccCCcHHHHHHHHhccCCCCCCCCCCCCCC
Q 040771 450 QTSLKDAEVYGTKYFNGNFKKLVEVKTRFDPDNFFKNEQSIPP 492 (496)
Q Consensus 450 ~~s~~~~~~~g~~yyg~n~~RL~~vK~kYDP~nvF~~~~~I~~ 492 (496)
.+| ...|.+.||++||+||++||+||||+|||+++|+|+|
T Consensus 484 ~~s---~~~~~~~yyg~n~~RL~~iK~kyDP~~vF~~~qsI~p 523 (523)
T 2wdx_A 484 NTS---GVPWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSIRP 523 (523)
T ss_dssp CCS---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred ccc---hhHHHHHHHHHHHHHHHHHHHHhCcHhhcCCCCCCCC
Confidence 001 0138889999999999999999999999999999987
No 7
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=5.3e-65 Score=544.48 Aligned_cols=447 Identities=22% Similarity=0.356 Sum_probs=317.5
Q ss_pred ccHhhhcccCCCCCCCCCCeEEcCCCCChHHHHHhhhcccccccCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEc
Q 040771 25 ESFLQCLPQHVQPSNPISDVIFTQNHSNFQSVLNAYIKNRKFLIASTPKPLAILTAKHESHVQATVICAKQAGLELRIRS 104 (496)
Q Consensus 25 ~~~~~~l~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~g 104 (496)
.+...|+... ...|++|+|+.|++++ +..||.||. ..|.+||+|+|++||+++|++|+++++||.+||
T Consensus 19 ~~~~~~~~~~-------~~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vrg 86 (521)
T 2ipi_A 19 FDGGACGART-------ALVKVDRVDRRYQDLV-TRGFNGRFR----GRPDVVYVVHTADQVVDAVNQAMAAGQRIAVRS 86 (521)
T ss_dssp -----------------CCCEEESSSTTHHHHH-TCCSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEEES
T ss_pred ccccccccCC-------CCeEECCCCcchHHHH-hcccccccc----CCCCEEEEcCCHHHHHHHHHHHHHcCCeEEEEC
Confidence 3456787774 3469999999999886 234577774 789999999999999999999999999999999
Q ss_pred CCCCCCCCCcccCCCeEEEEcCCCCCeEEcCCCCEEEEeCCccHHHHHHHHH-hcCCccccccCCCCccccccccccCCC
Q 040771 105 GGHDYDGLSYISTVPFVILDMFNLRSIDIDIANETAWVQAGATLGELYFKIA-NTSKVHAFPAGVCHSLGVGGHISGGGY 183 (496)
Q Consensus 105 gGh~~~g~~~~~~~~g~vIdl~~l~~i~id~~~~~v~v~aG~~~~~l~~~l~-~~g~~l~~~~G~~~~vgvgG~~~ggg~ 183 (496)
|||++.+.+... .++++|||++||+|++|+++++|+||||++|.+|+++|. ++| +.+++|.|+++||||+++|||+
T Consensus 87 gGh~~~g~~~~~-~~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~ 163 (521)
T 2ipi_A 87 GGHCFEGFVDDP-AVRAVIDMSQMRQVFYDSGKRAFAVEPGATLGETYRALYLDWG--VTIPAGVCPQVGVGGHVLGGGY 163 (521)
T ss_dssp SCCCTTCGGGCT-TCCEEEECTTCCCEEEETTTTEEEECTTSBHHHHHHHHHHHHS--BCCCCCSCTTCBHHHHTTTTCC
T ss_pred CCcCCCCCcccC-CCeEEEecccCCCeEEeCCCCEEEEeCCcCHHHHHHHHHHhcC--ceeCCCCCCCcccCCcccCCCC
Confidence 999998865422 258999999999999999999999999999999999997 788 6788999999999999999999
Q ss_pred CCCccccccccceeeEEEEEeeC--CeEEe---ccC-CCc--cchhhhccccCCCeEEEEEEEEEE-----------Eee
Q 040771 184 GNLLRKYGISVDNVIDAQLVDVK--GRILN---RES-MGE--DLFWAIRGGGGASFGVILAWKIKL-----------VAV 244 (496)
Q Consensus 184 g~~s~~~G~~~D~v~~~~vV~~~--G~~v~---~~~-~~~--dLf~a~rG~g~g~~GIVt~~t~~l-----------~p~ 244 (496)
|++++.||+++|+|+++|||++| |+++. ... +++ |||||+||||+|+|||||+++||+ +|.
T Consensus 164 g~~s~~~G~~~D~v~~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~ 243 (521)
T 2ipi_A 164 GPLSRRDGVVADHLYAVEVVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPK 243 (521)
T ss_dssp CTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCB
T ss_pred CccccccccHhhcEEEEEEEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccccCC
Confidence 99999999999999999999987 98743 222 445 599999997679999999999999 888
Q ss_pred Cce-eEEEEEeccch----hhHHHHHHHHHHHCCC--CCcc----ceEEEEEEcc-CCCeee----ecCcceecchhHHH
Q 040771 245 PEK-VTLFKVDKTLA----QGATDVLYKWQYVAPK--LPEE----LFIRVMILVP-KEEKTV----SPNDCHEMSWGQST 308 (496)
Q Consensus 245 ~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~p~~----~~~~~~~~~~-~g~~~v----~~~~~~~~~~~~~~ 308 (496)
|+. +..+.+.++.. +...++++.|+++... .|++ +...+.+... .+...+ ..........++..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~ 323 (521)
T 2ipi_A 244 APTSTLRHIVTWDWSALTEEAFTRIIDNHGAWHQSNSAAGTPYASMHSVFYLNSRAAGQILLDIQIDGGLDGAEALLNDF 323 (521)
T ss_dssp CCSCEEEEEEEEESTTCCHHHHHHHHHHHHHHHHHSCSSSSGGGGCEEEEEEECTTSCEEEEEEEEETTSTTHHHHHHHH
T ss_pred CCceEEEEEEEecccccCHHHHHHHHHHHHHHHHhccCCCccccceEEEEEeccCCCCceEEEEEeccCHHHHHHHHHHH
Confidence 753 34444444321 2345777777775432 4554 3333322221 121111 00000000011111
Q ss_pred Hh-hhc-CC-CCC-----cchhhhccCC--Cccc-ccceeecccccCCCCHhHHHHHHHHHhcCC--CceEEEeecCCcc
Q 040771 309 VF-FLD-SS-QNV-----TSIDVLLQRP--TEAK-ISFKAKSDYVKNVIPREGLEEIWKKMIDNE--NMFMQWNPYGGRM 375 (496)
Q Consensus 309 ~~-~~~-~~-~~~-----~~~~~~~~~~--~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~gg~v 375 (496)
.. +.. .. +.. .++....... .... ..++.++.++.+.++++.++.+++.+...+ .+.+.++++||++
T Consensus 324 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~GG~v 403 (521)
T 2ipi_A 324 VAAVNEGTGVEPAVQRSTEPWLRATLANKFDTGGFDRTKSKGAYLRKPWTAAQAATLYRHLSADSQVWGEVSLYSYGGKV 403 (521)
T ss_dssp HHHHTTTCSSCCEEEEEEECHHHHHTCCCCCCTTCCEEEEEEEEESSCCCHHHHHHHHHHHHSCCSSEEEEEEEECCGGG
T ss_pred HHHHHhhcCCCccceeeecCHHHHHHhhcCCCCCCccceeeccccccCCCHHHHHHHHHHHHhCCCCceEEEEEecCCcc
Confidence 00 000 00 000 0111111100 0111 234556777776789999999998887543 4678899999999
Q ss_pred ccCCCCCCCccccCCceEEEEEEeecCCCCccchHHHHHHHHHHHHhcCCCCCC------CCCCcccccCCCCCCCCCCC
Q 040771 376 SEISESETAFPHRAGNLFLIQYYESWPEEGINATDLYTNKLRDFYDSMAPYVSS------NPRNTYLNYRDLDIGISSNN 449 (496)
Q Consensus 376 ~~~~~~~taf~~R~~~~~~i~~~~~W~~~~~d~~~~~~~w~~~~~~~l~~~~~~------~~~~~Y~Nyad~~~~~~~~~ 449 (496)
++++.++++|+||+ ..+.+++...|.++.++ +...+|++++++.+.+...+ ...++|+||+|.+++.. ..
T Consensus 404 ~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~~~--~~~~~~~~~~~~~~~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~~-~~ 479 (521)
T 2ipi_A 404 NSVPETATATAQRD-SIIKVWMSATWMDPAHD--DANLAWIREIYREIFATTGGVPVPDDRTEGTFINYPDVDLVDE-RW 479 (521)
T ss_dssp GGSCTTTSSCCCCS-CSEEEEEEEEESCGGGH--HHHHHHHHHHHHHHTTTTTSSCCSSSSBCCCCTTSCCGGGGCT-TT
T ss_pred cCCCCccccccccc-hhhhcceeEecCCCCch--HHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCCCcccccc-cc
Confidence 99999999999999 78889999999876644 67789999999998733211 12479999999874210 00
Q ss_pred CCcchhhhhhcccccCCcHHHHHHHHhccCCCCCCCCCCCCCCC
Q 040771 450 QTSLKDAEVYGTKYFNGNFKKLVEVKTRFDPDNFFKNEQSIPPG 493 (496)
Q Consensus 450 ~~s~~~~~~~g~~yyg~n~~RL~~vK~kYDP~nvF~~~~~I~~~ 493 (496)
.++ ...|.+.|||+||+||++||+||||+|||+++|+|+|.
T Consensus 480 ~~~---~~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~p~ 520 (521)
T 2ipi_A 480 NTS---GVPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVRPP 520 (521)
T ss_dssp SCC---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred ccc---hhhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCCCC
Confidence 000 01388899999999999999999999999999999985
No 8
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=1.9e-64 Score=540.44 Aligned_cols=435 Identities=22% Similarity=0.376 Sum_probs=316.3
Q ss_pred CCeEEcCCCCChHHHHHhhhcccccccCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCcccCCCeE
Q 040771 42 SDVIFTQNHSNFQSVLNAYIKNRKFLIASTPKPLAILTAKHESHVQATVICAKQAGLELRIRSGGHDYDGLSYISTVPFV 121 (496)
Q Consensus 42 ~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~g~ 121 (496)
...|++|+|+.|+++++ .||.||. ..|.+||+|+|++||+++|++|+++++||++|||||++.+.+... .+++
T Consensus 33 ~~~v~~p~~~~Y~~~~~--~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~-~~gv 105 (530)
T 2y3s_A 33 HIDSVAPGDIRYEDLRR--GENLRFV----GDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANS-DVRV 105 (530)
T ss_dssp -CCEECTTSTTHHHHTC--CSCTTCC----CCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTCT-TCCE
T ss_pred CceEECCCCccHHHHHh--Hhhhhcc----CCCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccC-CCeE
Confidence 34689999999999864 3466664 789999999999999999999999999999999999998865432 3589
Q ss_pred EEEcCCCCCeEEcCCCCEEEEeCCccHHHHHHHHHh-cCCccccccCCCCccccccccccCCCCCCccccccccceeeEE
Q 040771 122 ILDMFNLRSIDIDIANETAWVQAGATLGELYFKIAN-TSKVHAFPAGVCHSLGVGGHISGGGYGNLLRKYGISVDNVIDA 200 (496)
Q Consensus 122 vIdl~~l~~i~id~~~~~v~v~aG~~~~~l~~~l~~-~g~~l~~~~G~~~~vgvgG~~~ggg~g~~s~~~G~~~D~v~~~ 200 (496)
+|||++||+|++|+++++|+||||++|.+|+++|.+ +| +.++.|.|++|||||+++|||+|+++++||+++|+|+++
T Consensus 106 vIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~ 183 (530)
T 2y3s_A 106 VMDMSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVWG--VTLPGGACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAV 183 (530)
T ss_dssp EEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHHS--CCCCCCSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEEE
T ss_pred EEEcccCCCEEEcCCCCEEEEeCCCCHHHHHHHHHhhcC--eEEeCCCCCCCCcCCCcCCCCCCcccccccchhhheeeE
Confidence 999999999999999999999999999999999985 78 678889999999999999999999999999999999999
Q ss_pred EEEee--CCeEEe---ccC-CCc--cchhhhccccCCCeEEEEEEEEEE------------EeeCc-eeEEEEEeccch-
Q 040771 201 QLVDV--KGRILN---RES-MGE--DLFWAIRGGGGASFGVILAWKIKL------------VAVPE-KVTLFKVDKTLA- 258 (496)
Q Consensus 201 ~vV~~--~G~~v~---~~~-~~~--dLf~a~rG~g~g~~GIVt~~t~~l------------~p~~~-~~~~~~~~~~~~- 258 (496)
|||++ +|+++. +.. +++ |||||+||||+|+|||||+++||+ +|.|+ .+..+.+.++..
T Consensus 184 evV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 263 (530)
T 2y3s_A 184 EVVVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWPWEG 263 (530)
T ss_dssp EEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEESTT
T ss_pred EEEEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEecccc
Confidence 99995 499743 222 455 499999998678999999999999 88865 344444444321
Q ss_pred ---hhHHHHHHHHHHHCC--CCCcc----ceEEEEEEcc-CCCeee------ecCcceecchhHHHHh-hhc-CC-CCC-
Q 040771 259 ---QGATDVLYKWQYVAP--KLPEE----LFIRVMILVP-KEEKTV------SPNDCHEMSWGQSTVF-FLD-SS-QNV- 318 (496)
Q Consensus 259 ---~~~~~~~~~~~~~~~--~~p~~----~~~~~~~~~~-~g~~~v------~~~~~~~~~~~~~~~~-~~~-~~-~~~- 318 (496)
+...++++.|+++.. ..|++ +...+.+... .+...+ ..... ...++.+.. +.. .. +..
T Consensus 264 ~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~l~p~~~~l~~~~g~~~~~ 341 (530)
T 2y3s_A 264 LDEAAFARLVRNHGRWFEQNSGPDSPWCDLYSVLALTRSQSGALAMTTQLDATGPDA--EKRLETYLAAVSEGVGVQPHS 341 (530)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECGGGSEEEEEEEEECCSTTH--HHHHHHHHHHHHTTCSSCCEE
T ss_pred cCHHHHHHHHHHHHHHhhhcCCCCcccceeEEEEEeccCCCCcEEEEEEEeCCHHHH--HHHHHHHHHHHHhhcCCCccc
Confidence 234567777776542 24554 2222222211 111111 00000 001111100 000 00 000
Q ss_pred ----cchhhhccC----CCc-ccccceeecccccCCCCHhHHHHHHHHHhcC----CCceEEEeecCCccccCCCCCCCc
Q 040771 319 ----TSIDVLLQR----PTE-AKISFKAKSDYVKNVIPREGLEEIWKKMIDN----ENMFMQWNPYGGRMSEISESETAF 385 (496)
Q Consensus 319 ----~~~~~~~~~----~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~gg~v~~~~~~~taf 385 (496)
.++...... +.. ....++.++.++.+.++++.++.+++.+... +.+.+.++++||++++++.++++|
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~GGav~~~~~~~ta~ 421 (530)
T 2y3s_A 342 DTRRLPWLHSTRWPGIAGDGDMTGRAKIKAAYARRSFDDRQIGTLYTRLTSTDYDNPAGVVALIAYGGKVNAVPADRTAV 421 (530)
T ss_dssp EEEEEEHHHHTTCHHHHCCCCCCSEEEEEEEEESSCCCHHHHHHHHHHHHCSSSCCTTCEEEEEECCGGGGGSCTTSSSC
T ss_pred eeeeccHHHHHHhhcCCCCCcccccceeeccccccCCCHHHHHHHHHHHHhcCCCCCceEEEEEecCCccccCCCCcCcc
Confidence 011100000 000 0013456777777678999999999888753 246788999999999999999999
Q ss_pred cccCCceEEEEEEeecCCCCccchHHHHHHHHHHHHhcCCCCCC------CCCCcccccCCCCCCCCCCCCCcchhhhhh
Q 040771 386 PHRAGNLFLIQYYESWPEEGINATDLYTNKLRDFYDSMAPYVSS------NPRNTYLNYRDLDIGISSNNQTSLKDAEVY 459 (496)
Q Consensus 386 ~~R~~~~~~i~~~~~W~~~~~d~~~~~~~w~~~~~~~l~~~~~~------~~~~~Y~Nyad~~~~~~~~~~~s~~~~~~~ 459 (496)
+||+ ..+.+++...|.++.++ +...+|++++++.+.+...+ ...++|+||+|.+++.. ...+| ...|
T Consensus 422 ~~R~-~~~~~~~~~~w~~~~~~--~~~~~w~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~~-~~~~s---~~~~ 494 (530)
T 2y3s_A 422 AQRD-SILKIVYVTTWEDPAQD--PVHVRWIRELYRDVYADTGGVPVPGGAADGAYVNYPDVDLADE-EWNTS---GVPW 494 (530)
T ss_dssp CCCS-CSEEEEEEEEECCTTCH--HHHHHHHHHHHHHHTGGGTTSCCTTTTBCCCCTTSCCGGGGCT-TTCCS---SCCH
T ss_pred cccc-cceeEEEEEecCCCcch--HHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCcCcccccc-ccccc---hhHH
Confidence 9999 78889999999877654 67789999999988733211 12479999999874210 00011 0138
Q ss_pred cccccCCcHHHHHHHHhccCCCCCCCCCCCCCCCC
Q 040771 460 GTKYFNGNFKKLVEVKTRFDPDNFFKNEQSIPPGN 494 (496)
Q Consensus 460 g~~yyg~n~~RL~~vK~kYDP~nvF~~~~~I~~~~ 494 (496)
++.|||+||+||++||+||||+|||+++|+|+|.+
T Consensus 495 ~~~yyg~n~~RL~~iK~kyDP~nvF~~~q~I~p~~ 529 (530)
T 2y3s_A 495 SELYYKDAYPRLQAVKARWDPRNVFRHALSVRVPP 529 (530)
T ss_dssp HHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHhCchhhcCCCCCCCCCC
Confidence 88999999999999999999999999999999863
No 9
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=4.6e-64 Score=535.41 Aligned_cols=434 Identities=25% Similarity=0.460 Sum_probs=324.3
Q ss_pred CCcccHhhhcccCCCCCCCCCCeEEcCCCCChHHHHHhhhcccccccCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEE
Q 040771 22 SNLESFLQCLPQHVQPSNPISDVIFTQNHSNFQSVLNAYIKNRKFLIASTPKPLAILTAKHESHVQATVICAKQAGLELR 101 (496)
Q Consensus 22 ~~~~~~~~~l~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~ 101 (496)
...+.|..||.... ..+++|+++.|+... .+|+......|.+||+|+|++||+++|++|+++++||.
T Consensus 4 ~~~~~l~~~l~~~~-------~~~~~~~~~~y~~~~------~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~ 70 (503)
T 1zr6_A 4 AEFNSINACLAAAD-------VEFHEEDSEGWDMDG------TAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQIS 70 (503)
T ss_dssp CTTCHHHHHHHHTT-------CEECCTTSHHHHHHT------SCSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHhhCcCC-------ceecCCCccchHHHh------hhhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEE
Confidence 34567888888632 258899999998763 25665556899999999999999999999999999999
Q ss_pred EEcCCCCCCCCCcccCCCeEEEEcCCCCCeEEcCCCCEEEEeCCccHHHHHHHHHhcCCccccccCCCCccccccccccC
Q 040771 102 IRSGGHDYDGLSYISTVPFVILDMFNLRSIDIDIANETAWVQAGATLGELYFKIANTSKVHAFPAGVCHSLGVGGHISGG 181 (496)
Q Consensus 102 ~~ggGh~~~g~~~~~~~~g~vIdl~~l~~i~id~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~G~~~~vgvgG~~~gg 181 (496)
+|||||++.+.+.....++++|||++||+|++| ++++|+||||+++.+|+++|.+++ ++.+|.|.|+++||||+++||
T Consensus 71 v~ggGh~~~~~~~~~~~~gvvIdl~~l~~i~~d-~~~~v~v~aG~~~~~l~~~l~~~~-gl~~~~G~~~~vgvgG~~~gG 148 (503)
T 1zr6_A 71 AKGGGHSYGSYGFGGEDGHLMLELDRMYRVSVD-DNNVATIQGGARLGYTALELLDQG-NRALSHGTCPAVGVGGHVLGG 148 (503)
T ss_dssp EESSCCCTTCTTTTSSSSCEEEECTTCCCEEEC-TTSCEEEETTCBHHHHHHHHHHTT-SEECCCCSCTTSBHHHHHHHC
T ss_pred EECCCcCCCCCcccCCCCcEEEECccCCCEEEC-CCCeEEEecCCCHHHHHHHHHHcC-CEEeCCCCCCcCchhhhhcCC
Confidence 999999998765432235899999999999999 888999999999999999997765 367889999999999999999
Q ss_pred CCCCCccccccccceeeEEEEEeeCCeEEe-ccCCCccchhhhccccCCCeEEEEEEEEEEEeeCceeEEEEEeccc-hh
Q 040771 182 GYGNLLRKYGISVDNVIDAQLVDVKGRILN-RESMGEDLFWAIRGGGGASFGVILAWKIKLVAVPEKVTLFKVDKTL-AQ 259 (496)
Q Consensus 182 g~g~~s~~~G~~~D~v~~~~vV~~~G~~v~-~~~~~~dLf~a~rG~g~g~~GIVt~~t~~l~p~~~~~~~~~~~~~~-~~ 259 (496)
|+|++++.||+++|+|+++|||++||++++ ...+|+|||||+||| +|+|||||+++||++|.|+....+.+.+.+ .+
T Consensus 149 g~g~~s~~~G~~~D~v~~~~vV~a~G~i~~~~~~~~~dL~~a~rG~-~g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~ 227 (503)
T 1zr6_A 149 GYGFATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGG-GGGFAIVSEFEFNTFEAPEIITTYQVTTTWNRK 227 (503)
T ss_dssp CCSTTHHHHCCGGGGEEEEEEECTTSCEEEEBTTBSHHHHHHHTTC-CSSSCEEEEEEECCEECCSCEEEEEEEECCCHH
T ss_pred CCCcccccccChhheEEEEEEEecCCCEEEeCCCCCccHHHHHhcc-CCCcEEEEEEEEEEEecCceeEEEEEEEeCCHH
Confidence 999999999999999999999999999998 556789999999999 579999999999999998866666665543 34
Q ss_pred hHHHHHHHHHHHCCC-CCccceEEEEEEcc--------CCCee-----e-------e----cCcceecchhHHHHhhhcC
Q 040771 260 GATDVLYKWQYVAPK-LPEELFIRVMILVP--------KEEKT-----V-------S----PNDCHEMSWGQSTVFFLDS 314 (496)
Q Consensus 260 ~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~--------~g~~~-----v-------~----~~~~~~~~~~~~~~~~~~~ 314 (496)
++.+++..|+++... +|++++..+.+... .|... + . ...+..++|.+....+...
T Consensus 228 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (503)
T 1zr6_A 228 QHVAGLKALQDWAQNTMPRELSMRLEINANALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETDWYGQINTYLYG 307 (503)
T ss_dssp HHHHHHHHHHHHHHHTCCTTBCCEEEEETTEEEEEEEESSCHHHHHHHHHHHHHHTTSCEEEEEEEEECHHHHHTTSCTT
T ss_pred HHHHHHHHHHHHHhhcCChhHEEEEEEeCCeEEEEEEEECCHHHHHHHHHHHHHhcCcCCCcCceeeCCHHHHHHHHcCC
Confidence 466788888886654 78887766554321 01100 0 0 0000111121111000000
Q ss_pred CCCCcchhhhcc--CCCcccccceeecccccCCCCHhHHHHHHHHHh-cCC-----CceEEEeecCC---ccccCCCCCC
Q 040771 315 SQNVTSIDVLLQ--RPTEAKISFKAKSDYVKNVIPREGLEEIWKKMI-DNE-----NMFMQWNPYGG---RMSEISESET 383 (496)
Q Consensus 315 ~~~~~~~~~~~~--~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~gg---~v~~~~~~~t 383 (496)
...+ .+......++.++.++.+ ++++.++.+++.+. ..+ .+.+.++++|| ++.+++.+++
T Consensus 308 --------~~~~~~~p~g~~~~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~av~~~~~~~t 378 (503)
T 1zr6_A 308 --------ADLNITYNYDVHEYFYANSLTAPR-LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSALAAVSNDET 378 (503)
T ss_dssp --------CCSSCSSCCCCCBCEEEEEEEESS-CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTCSGGGSCTTTS
T ss_pred --------CcccccCCCCccccceecccchhh-CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCchhhhcCCCcccC
Confidence 0000 011112345667777776 88999999998887 532 13578899999 8999999999
Q ss_pred CccccCCceEEEEEEeec-----CCCCccchHHHHHHHHHHHHhcCCCCCCCCCCcccccCCCCCCCCCCCCCcchhhhh
Q 040771 384 AFPHRAGNLFLIQYYESW-----PEEGINATDLYTNKLRDFYDSMAPYVSSNPRNTYLNYRDLDIGISSNNQTSLKDAEV 458 (496)
Q Consensus 384 af~~R~~~~~~i~~~~~W-----~~~~~d~~~~~~~w~~~~~~~l~~~~~~~~~~~Y~Nyad~~~~~~~~~~~s~~~~~~ 458 (496)
+|+||+ ..+.+++...| .++..+ +...+|++++++.+.........++|+||+|.+++ ...
T Consensus 379 a~~~R~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~-----------~~~ 444 (503)
T 1zr6_A 379 AYAHRD-QLWLWQFYDSIYDYENNTSPYP--ESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLT-----------KEE 444 (503)
T ss_dssp SCCCTT-CSEEEEEEEEETTTTTCCTTTT--TSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCC-----------HHH
T ss_pred Cccccc-ceeEEEEEeeeccccCCCccch--HHHHHHHHHHHHHHHhhCCCCCCceeccCCCcccc-----------cch
Confidence 999998 67877776666 333222 33456777666655443321123799999997631 136
Q ss_pred hcccccCCcHHHHHHHHhccCCCCCCCCCCCCCCCC
Q 040771 459 YGTKYFNGNFKKLVEVKTRFDPDNFFKNEQSIPPGN 494 (496)
Q Consensus 459 ~g~~yyg~n~~RL~~vK~kYDP~nvF~~~~~I~~~~ 494 (496)
|.+.|||+||+||++||+||||+|||+++|+|+|..
T Consensus 445 ~~~~~yG~n~~RL~~iK~kyDP~~vF~~~~~i~~~~ 480 (503)
T 1zr6_A 445 AQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEPIA 480 (503)
T ss_dssp HHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCCC
T ss_pred HHHHHHHhHHHHHHHHHHHhCchhhcCCCCCCCchh
Confidence 888899999999999999999999999999999863
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=2.3e-62 Score=517.82 Aligned_cols=419 Identities=21% Similarity=0.290 Sum_probs=305.0
Q ss_pred CCeEEcCCCCChHHHHHhhhcccccccCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCcccCCCeE
Q 040771 42 SDVIFTQNHSNFQSVLNAYIKNRKFLIASTPKPLAILTAKHESHVQATVICAKQAGLELRIRSGGHDYDGLSYISTVPFV 121 (496)
Q Consensus 42 ~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~g~ 121 (496)
++.|++|+|+.|+.+++ +|+......|.+||+|+|++||+++|++|+++++|+.+||||||+.+.+.. .+++
T Consensus 13 ~~~v~~p~~~~y~~~~~------~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~--~~gv 84 (459)
T 2bvf_A 13 QGEVIYPDDSGFDAIAN------IWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATN--DGGI 84 (459)
T ss_dssp SSEEECTTSTTHHHHHC------CSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTCC--SSSE
T ss_pred CceEECCCCccHHHHHH------HhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCcccc--CCeE
Confidence 77899999999998643 466666689999999999999999999999999999999999999887542 3589
Q ss_pred EEEcCCCCCeEEcCCCCEEEEeCCccHHHHHHHHHhcCCccccccCCCCccccccccccCCCCCCccccccccceeeEEE
Q 040771 122 ILDMFNLRSIDIDIANETAWVQAGATLGELYFKIANTSKVHAFPAGVCHSLGVGGHISGGGYGNLLRKYGISVDNVIDAQ 201 (496)
Q Consensus 122 vIdl~~l~~i~id~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~G~~~~vgvgG~~~ggg~g~~s~~~G~~~D~v~~~~ 201 (496)
+|||++||+|++|+++.+|+||||++|.+|+++|.++| +.+++|.|+.+||||+++|||+|++++.||+++|+|+++|
T Consensus 85 vi~l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~G--l~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~~ 162 (459)
T 2bvf_A 85 VLDLRLMNSIHIDTAGSRARIGGGVISGDLVKEAAKFG--LAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILGAT 162 (459)
T ss_dssp EEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHTTT--EEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEEE
T ss_pred EEECCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHcC--CEecCCCCCCcccceeecCCCCccccccccCHhHhEEEEE
Confidence 99999999999999999999999999999999999998 7788899999999999999999999999999999999999
Q ss_pred EEeeCCeEEe-ccCCCccchhhhccccCCCeEEEEEEEEEEEeeCceeEEEEEeccchhhHH--HHHHHHHHHCCCCCcc
Q 040771 202 LVDVKGRILN-RESMGEDLFWAIRGGGGASFGVILAWKIKLVAVPEKVTLFKVDKTLAQGAT--DVLYKWQYVAPKLPEE 278 (496)
Q Consensus 202 vV~~~G~~v~-~~~~~~dLf~a~rG~g~g~~GIVt~~t~~l~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~~ 278 (496)
||++||++++ ...+|+|||||+||| +|+|||||+++||++|.|+......+.++. .+.. +++..|+++...+|++
T Consensus 163 vV~~~G~i~~~~~~~~~dLf~a~rg~-~g~~GiVt~~~l~l~p~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 240 (459)
T 2bvf_A 163 LVTATGDVIYCSDDERPELFWAVRGA-GPNFGVVTEVEVQLYELPRKMLAGFITWAP-SVSELAGLLTSLLDALNEMADH 240 (459)
T ss_dssp EECTTSCEEEEESSSSHHHHHHHHHH-GGGTCEEEEEEEEEEECCCCEEEEEEEECC-CHHHHHHHHHHHHHHHHHTTTT
T ss_pred EEcCCCeEEEeCCCCChhhHhHhhcc-CCccEEEEEEEEEEEECCCcEEEEEEEech-HHhhHHHHHHHHHHHHHhCcHh
Confidence 9999999998 556789999999998 589999999999999996555444444543 2233 6677777655444555
Q ss_pred ceEEEEEEc-cCCCeee----ecCcc-ee-cchhHHHHhhh-cCCCC--Ccchhhhc-------cCCCccccccee-ecc
Q 040771 279 LFIRVMILV-PKEEKTV----SPNDC-HE-MSWGQSTVFFL-DSSQN--VTSIDVLL-------QRPTEAKISFKA-KSD 340 (496)
Q Consensus 279 ~~~~~~~~~-~~g~~~v----~~~~~-~~-~~~~~~~~~~~-~~~~~--~~~~~~~~-------~~~~~~~~~~~~-~s~ 340 (496)
+...+.+.. ..+...+ ..... .. ...++.+..+. ..... ..++..+. ..+.. ...+.. ++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~ 319 (459)
T 2bvf_A 241 IYPSVFVGVDENRAPSVTVCVGHLGGLDIAERDIARLRGLGRTVSDSIAVRSYDEVVALNAEVGSFEDG-MSNLWIDREI 319 (459)
T ss_dssp CCCEEEEEECTTCCEEEEEEEECCSCHHHHHHHHHHHHTTSCCSEECCEEECHHHHHHHHHHHSCCCCS-CEEEEEEEEE
T ss_pred hccccccCcccCCCceEEEEEEEeCCHHHHHHHHHHHHHhCcchhcceeecCHHHHHhcccccccCCCC-CcceEecccc
Confidence 532221111 1122211 00000 00 00011111110 00000 00110000 00111 122222 566
Q ss_pred cccCCCCHhHHHHHHHHHhcCC-Cc-eEEEeecCCccccCCCCCCCccccCCceEEEEEEeecCCCC-ccchHHHHHHHH
Q 040771 341 YVKNVIPREGLEEIWKKMIDNE-NM-FMQWNPYGGRMSEISESETAFPHRAGNLFLIQYYESWPEEG-INATDLYTNKLR 417 (496)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~gg~v~~~~~~~taf~~R~~~~~~i~~~~~W~~~~-~d~~~~~~~w~~ 417 (496)
++.+.++++.++.+++.+.+.+ .. .+.++.+||++.+ .+.++|+||+ ..| +.+...|.++. +| +...+|++
T Consensus 320 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~--~~~ta~~~R~-~~~-~~~~~~w~~~~~~~--~~~~~~~~ 393 (459)
T 2bvf_A 320 AMPNARFAEAIAGNLDKFVSEPASGGSVKLEIEGMPFGN--PKRTPARHRD-AMG-VLALAEWSGAAPGS--EKYPELAR 393 (459)
T ss_dssp CSCHHHHHHHHHTTGGGCEEETTTTEEEEEEEECCCCCC--TTCCSSCCCS-SCE-EEEEEEECTTSTTT--THHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHhhCCCCCceeEEEEeCCccCC--CCCCCcccCC-cce-EEEEEEeCCCccch--HHHHHHHH
Confidence 6653355666666666554433 22 3445555888776 6779999999 567 88888998776 33 55789999
Q ss_pred HHHHhcCCCCCCCCCCcccccCCCCCCCCCCCCCcchhhhhhcccccCCc-HHHHHHHHhccCCCCCCCCCCCCCC
Q 040771 418 DFYDSMAPYVSSNPRNTYLNYRDLDIGISSNNQTSLKDAEVYGTKYFNGN-FKKLVEVKTRFDPDNFFKNEQSIPP 492 (496)
Q Consensus 418 ~~~~~l~~~~~~~~~~~Y~Nyad~~~~~~~~~~~s~~~~~~~g~~yyg~n-~~RL~~vK~kYDP~nvF~~~~~I~~ 492 (496)
++++.+.++......++|+||+|.+. ..|...|||+| |+||++||+||||+|+|+++|+|+|
T Consensus 394 ~~~~~l~~~~~~p~~g~Y~N~~d~~~-------------~~~~~~~yG~~n~~rL~~iK~kyDP~~vF~~~~~I~p 456 (459)
T 2bvf_A 394 ELDAALLRAGVTTSGFGLLNNNSEVT-------------AEMVAEVYKPEVYSRLAAVKREYDPENRFRHNYNIDP 456 (459)
T ss_dssp HHHHHHHHTTCEEEEECCGGGCSSCC-------------HHHHHHHHCHHHHHHHHHHHHHHCTTCCCCSSSCCCC
T ss_pred HHHHHhcccccCCCCCeeeCCCCCcc-------------hHHHHHHhCcchHHHHHHHHHHhCcccccCCCCCCCC
Confidence 99999988752112368999998641 35788899986 9999999999999999999999998
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=2e-39 Score=348.40 Aligned_cols=227 Identities=17% Similarity=0.206 Sum_probs=177.3
Q ss_pred CcccHhhhcccCCCCCCCCCCeEEcCCCCChHHHHHhhhcccccccCCCCCccEEEEcCCHHHHHHHHHHHHH--c-CCc
Q 040771 23 NLESFLQCLPQHVQPSNPISDVIFTQNHSNFQSVLNAYIKNRKFLIASTPKPLAILTAKHESHVQATVICAKQ--A-GLE 99 (496)
Q Consensus 23 ~~~~~~~~l~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~--~-~~~ 99 (496)
..+++.+||.+... .+.|.+ ++..+... ...|+......|.+|++|+|++||+++|++|++ + ++|
T Consensus 30 ~~~~~~~~l~~~~~-----~~~v~~-~~~~~~~~------~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~ 97 (534)
T 1w1o_A 30 RGRPWPASLAALAL-----DGKLRT-DSNATAAA------STDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYT 97 (534)
T ss_dssp ----------CTTT-----TTCEEC-SHHHHHHT------SCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCC
T ss_pred chHHHHHHHHhcCC-----CceEec-CHHHHHHH------hccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCce
Confidence 55688899988332 456665 22233322 224665566789999999999999999999998 6 999
Q ss_pred EEEEcCCCCCCCCCcccCCCeEEEEcCCCCCe------EEcCCCCEEEEeCCccHHHHHHHHHhcCCccccc-cCCCCcc
Q 040771 100 LRIRSGGHDYDGLSYISTVPFVILDMFNLRSI------DIDIANETAWVQAGATLGELYFKIANTSKVHAFP-AGVCHSL 172 (496)
Q Consensus 100 ~~~~ggGh~~~g~~~~~~~~g~vIdl~~l~~i------~id~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~-~G~~~~v 172 (496)
++++|||||+.|.+... ++++|||++||+| ++|+++.+++||||++|.+|++++.++| +..+ .+.+..+
T Consensus 98 v~~~G~G~~~~g~~~~~--~gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~G--l~~~~~~~~~~~ 173 (534)
T 1w1o_A 98 IAFRGRGHSLMGQAFAP--GGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARG--VAPRSWTDYLYL 173 (534)
T ss_dssp EEEESSCCCSSSTTCCT--TSEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTT--EEESCCCSSCCS
T ss_pred EEEECCCCCCCCCcCCC--CeEEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCC--CcccCCCCCCCE
Confidence 99999999999876543 4899999999985 7888889999999999999999999998 4433 3455678
Q ss_pred ccccccccCCCCCCccccccccceeeEEEEEeeCCeEEe-ccCCCccchhhhccccCCCeEEEEEEEEEEEeeCceeEEE
Q 040771 173 GVGGHISGGGYGNLLRKYGISVDNVIDAQLVDVKGRILN-RESMGEDLFWAIRGGGGASFGVILAWKIKLVAVPEKVTLF 251 (496)
Q Consensus 173 gvgG~~~ggg~g~~s~~~G~~~D~v~~~~vV~~~G~~v~-~~~~~~dLf~a~rG~g~g~~GIVt~~t~~l~p~~~~~~~~ 251 (496)
+|||.+.+||.|..+++||.++|+|+++|||++||++++ ...+|+||||++||| +|+|||||+++||++|.|+...++
T Consensus 174 tvGG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~~~~~~~~dL~~~~rGs-~G~~GIVt~~~l~l~p~~~~~~~~ 252 (534)
T 1w1o_A 174 TVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGG-LGQFGVITRARIAVEPAPARARWV 252 (534)
T ss_dssp BHHHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTC-TTCSEEEEEEEEEEEECCSEEEEE
T ss_pred EeceeccCCCccccccccccHhhhEEEEEEEeCCccEEEECCCCChhhHhhhcCC-CCCcEEEEEEEEEEEECCcceEEE
Confidence 999999999999999999999999999999999999998 555789999999999 689999999999999999876555
Q ss_pred EEeccchhhHHHHHH
Q 040771 252 KVDKTLAQGATDVLY 266 (496)
Q Consensus 252 ~~~~~~~~~~~~~~~ 266 (496)
.+.+.....+.+.+.
T Consensus 253 ~~~~~~~~~~~~~~~ 267 (534)
T 1w1o_A 253 RFVYTDFAAFSADQE 267 (534)
T ss_dssp EEEESCHHHHHHHHH
T ss_pred EEEeCCHHHHHHHHH
Confidence 555543334444443
No 12
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=3.9e-34 Score=313.86 Aligned_cols=204 Identities=25% Similarity=0.174 Sum_probs=179.1
Q ss_pred cccCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCccc---CCCeEEEEcCCCCCe-EEcCCCCEEE
Q 040771 66 FLIASTPKPLAILTAKHESHVQATVICAKQAGLELRIRSGGHDYDGLSYIS---TVPFVILDMFNLRSI-DIDIANETAW 141 (496)
Q Consensus 66 ~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~---~~~g~vIdl~~l~~i-~id~~~~~v~ 141 (496)
|.......|++||+|+|++||+++|++|+++++||++||||||+.|.+... ..++|+|||++||+| +||+++.+++
T Consensus 198 ~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~at 277 (658)
T 4bby_A 198 REGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAH 277 (658)
T ss_dssp HSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEE
T ss_pred hCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEE
Confidence 555666899999999999999999999999999999999999988655432 234789999999997 8999999999
Q ss_pred EeCCccHHHHHHHHHhcCCccccccCCCCccccccccccCCCCCCccccccccceeeEEEEEeeCCeEEe-----ccCCC
Q 040771 142 VQAGATLGELYFKIANTSKVHAFPAGVCHSLGVGGHISGGGYGNLLRKYGISVDNVIDAQLVDVKGRILN-----RESMG 216 (496)
Q Consensus 142 v~aG~~~~~l~~~l~~~g~~l~~~~G~~~~vgvgG~~~ggg~g~~s~~~G~~~D~v~~~~vV~~~G~~v~-----~~~~~ 216 (496)
||||+++.+|.++|.++|+.+++.+++...++|||++++++.|..+.+||.+.|+|+++|||++||++++ ....+
T Consensus 278 VeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k~~aG 357 (658)
T 4bby_A 278 VEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPRMSTG 357 (658)
T ss_dssp EETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSSCCSS
T ss_pred EecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccccCCC
Confidence 9999999999999999997666667888889999999999999999999999999999999999999986 23457
Q ss_pred ccchhhhccccCCCeEEEEEEEEEEEeeCceeEEEEEeccchhhHHHHHHHHHH
Q 040771 217 EDLFWAIRGGGGASFGVILAWKIKLVAVPEKVTLFKVDKTLAQGATDVLYKWQY 270 (496)
Q Consensus 217 ~dLf~a~rG~g~g~~GIVt~~t~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (496)
+||+|+++|+ .|+|||||++||||+|.|+......+.++..+++.+++..+.+
T Consensus 358 yDL~~L~iGS-EGTLGIITeatLrL~P~P~~~~~~~~~f~d~~~a~~av~~i~~ 410 (658)
T 4bby_A 358 PDIHHFIMGS-EGTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACLREIAK 410 (658)
T ss_dssp SCTHHHHTTC-TTSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred cCHHHHhccC-CCcCcceeeeeeeeccCCccccccccccCCchhhhhhHHHHHH
Confidence 8999999999 7999999999999999999877666666655666666666554
No 13
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=5.4e-33 Score=293.31 Aligned_cols=204 Identities=24% Similarity=0.252 Sum_probs=177.0
Q ss_pred ccccCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCcccCCCeEEEEcCCCCCe-EEcCCCCEEEEe
Q 040771 65 KFLIASTPKPLAILTAKHESHVQATVICAKQAGLELRIRSGGHDYDGLSYISTVPFVILDMFNLRSI-DIDIANETAWVQ 143 (496)
Q Consensus 65 r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~g~vIdl~~l~~i-~id~~~~~v~v~ 143 (496)
.|+......|.+||+|+|++||+++|++|+++++|++++|||||+.|.+... .++++|||++||+| ++|+++.+++||
T Consensus 43 d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~~-~ggvvIdl~~m~~i~~id~~~~~v~V~ 121 (476)
T 3pm9_A 43 EERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPH-NGEVVISLKRMDKIREIDTSSNTITVE 121 (476)
T ss_dssp CTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCCC-SSCEEEECTTCCCEEEEETTTTEEEEE
T ss_pred ccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccCC-CCcEEEEeeCCCceEEEcCCCCeEEEC
Confidence 4655456789999999999999999999999999999999999999877643 35899999999998 799999999999
Q ss_pred CCccHHHHHHHHHhcCCccccccCCCCccccccccccCCCCCCccccccccceeeEEEEEeeCCeEEec------cCCCc
Q 040771 144 AGATLGELYFKIANTSKVHAFPAGVCHSLGVGGHISGGGYGNLLRKYGISVDNVIDAQLVDVKGRILNR------ESMGE 217 (496)
Q Consensus 144 aG~~~~~l~~~l~~~g~~l~~~~G~~~~vgvgG~~~ggg~g~~s~~~G~~~D~v~~~~vV~~~G~~v~~------~~~~~ 217 (496)
||++|.+|+++|.++|+.+++..+++..++|||.+.+++.|..+.+||.++|+|+++|||++||++++. +..++
T Consensus 122 aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~k~~~g~ 201 (476)
T 3pm9_A 122 AGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLKKDNTGY 201 (476)
T ss_dssp TTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCSCCCSSC
T ss_pred CCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCcccCCCCCc
Confidence 999999999999999954444457777899999999999999999999999999999999999999862 23468
Q ss_pred cchhhhccccCCCeEEEEEEEEEEEeeCceeEEEEEeccchhhHHHHHHHHHH
Q 040771 218 DLFWAIRGGGGASFGVILAWKIKLVAVPEKVTLFKVDKTLAQGATDVLYKWQY 270 (496)
Q Consensus 218 dLf~a~rG~g~g~~GIVt~~t~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (496)
||+|+++|+ .|+|||||+++||++|.|+......+.++..+++.+++..+++
T Consensus 202 dl~~l~~Gs-~GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 202 DLRDLFIGA-EGTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQG 253 (476)
T ss_dssp CCHHHHTTS-TTSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred CHHHHhccC-CCCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHHH
Confidence 999999999 7999999999999999998766655666655666667766654
No 14
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=100.00 E-value=2e-31 Score=278.41 Aligned_cols=193 Identities=19% Similarity=0.204 Sum_probs=162.7
Q ss_pred ccccCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCcccCCCeEEEEcCCCCCe-EEcCCCCEEEEe
Q 040771 65 KFLIASTPKPLAILTAKHESHVQATVICAKQAGLELRIRSGGHDYDGLSYISTVPFVILDMFNLRSI-DIDIANETAWVQ 143 (496)
Q Consensus 65 r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~g~vIdl~~l~~i-~id~~~~~v~v~ 143 (496)
+|+......|.+|++|+|++||+++|++| +|++++|||||+.+.+. ...++++|||++||+| ++|+++++++||
T Consensus 12 ~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~-~~~~g~vi~l~~l~~i~~~d~~~~~v~v~ 86 (422)
T 2vfr_A 12 NWAGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAE-PGDGGVLLSLAGLPSVVDVDTAARTVRVG 86 (422)
T ss_dssp CSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTC-CCTTCEEECSTTSCCCEEEETTTTEEEEE
T ss_pred cCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCcc-CCCCcEEEEhhhCCCcEEEcCCCCEEEEc
Confidence 57777778999999999999999999998 89999999999988766 2335899999999997 899999999999
Q ss_pred CCccHHHHHHHHHhcCCccccc-cCCCCccccccccccCCCCCCccccccccceeeEEEEEeeCCeEEe-ccCCCccchh
Q 040771 144 AGATLGELYFKIANTSKVHAFP-AGVCHSLGVGGHISGGGYGNLLRKYGISVDNVIDAQLVDVKGRILN-RESMGEDLFW 221 (496)
Q Consensus 144 aG~~~~~l~~~l~~~g~~l~~~-~G~~~~vgvgG~~~ggg~g~~s~~~G~~~D~v~~~~vV~~~G~~v~-~~~~~~dLf~ 221 (496)
||+++.+|.++|.++|+ .++ .+.++.++|||.+++|++|.. ..||..+|+|+++++|++||++++ ...+++ ||
T Consensus 87 aG~~l~~l~~~l~~~Gl--~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~~--f~ 161 (422)
T 2vfr_A 87 GGVRYAELARVVHARGL--ALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGDER--FG 161 (422)
T ss_dssp TTCBHHHHHHHHHHTTE--ECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTSTT--GG
T ss_pred CCCCHHHHHHHHHHcCC--cccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCCCC--cc
Confidence 99999999999999994 455 488888999999999999976 799999999999999999999998 444444 99
Q ss_pred hhccccCCCeEEEEEEEEEEEeeCceeEEEEEeccchhhHH-HHHHHHH
Q 040771 222 AIRGGGGASFGVILAWKIKLVAVPEKVTLFKVDKTLAQGAT-DVLYKWQ 269 (496)
Q Consensus 222 a~rG~g~g~~GIVt~~t~~l~p~~~~~~~~~~~~~~~~~~~-~~~~~~~ 269 (496)
+++|+ .|++||||++|||++|.++....... +...+++. +.+..+.
T Consensus 162 ~~~g~-~G~lGvit~~~l~l~p~~~~~~~~~~-~~~~~~~~~~~~~~~~ 208 (422)
T 2vfr_A 162 GAVTS-LGALGVVTSLTLDLEPAYEMEQHVFT-ELPLAGLDPATFETVM 208 (422)
T ss_dssp GTSSC-TTTTCEEEEEEEECEECCEEEEEEEE-EECSTTCCHHHHHHHH
T ss_pred eEEec-CCCCEEEEEEEEEEEecCceEEEEEe-cCCHHHHHHHHHHHHH
Confidence 99998 68999999999999999875433222 22233444 5555443
No 15
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.98 E-value=5.1e-32 Score=292.17 Aligned_cols=200 Identities=20% Similarity=0.187 Sum_probs=169.6
Q ss_pred CCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCcccC--CCeEEEEcCCCCCe-EEcCCCCEEEEeCCc
Q 040771 70 STPKPLAILTAKHESHVQATVICAKQAGLELRIRSGGHDYDGLSYIST--VPFVILDMFNLRSI-DIDIANETAWVQAGA 146 (496)
Q Consensus 70 ~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~--~~g~vIdl~~l~~i-~id~~~~~v~v~aG~ 146 (496)
....|.+||+|+|++||+++|++|+++++|++++|||||+.|.+.... .++++|||++||+| ++|+++.+++||||+
T Consensus 134 ~~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv 213 (584)
T 2uuu_A 134 VKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGI 213 (584)
T ss_dssp CCCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTC
T ss_pred cCCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCC
Confidence 346899999999999999999999999999999999999987665321 35789999999998 899999999999999
Q ss_pred cHHHHHHHHHhcCCccccccCCCCccccccccccCCCCCCccccccccceeeEEEEEeeCCeEEe----ccCCCccchhh
Q 040771 147 TLGELYFKIANTSKVHAFPAGVCHSLGVGGHISGGGYGNLLRKYGISVDNVIDAQLVDVKGRILN----RESMGEDLFWA 222 (496)
Q Consensus 147 ~~~~l~~~l~~~g~~l~~~~G~~~~vgvgG~~~ggg~g~~s~~~G~~~D~v~~~~vV~~~G~~v~----~~~~~~dLf~a 222 (496)
++.+|+++|.++|+.++..+++...++|||++++|+.|+.+..||.++|+|+++|||++||++++ +...++||+|+
T Consensus 214 ~~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~~~ 293 (584)
T 2uuu_A 214 MGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKHI 293 (584)
T ss_dssp BHHHHHHHHHHTTEECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTHHH
T ss_pred cHHHHHHHHHHcCCeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchhhh
Confidence 99999999999995443333344568999999999999999999999999999999999999886 34468999999
Q ss_pred hccccCCCeEEEEEEEEEEEeeCceeEEEEEeccchhhHHHHHHHHHH
Q 040771 223 IRGGGGASFGVILAWKIKLVAVPEKVTLFKVDKTLAQGATDVLYKWQY 270 (496)
Q Consensus 223 ~rG~g~g~~GIVt~~t~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (496)
++|+ .|+|||||+++||++|.|+....+.+.++..+++.+++..+.+
T Consensus 294 ~~Gs-eGtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~~ 340 (584)
T 2uuu_A 294 ILGS-EGTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIRS 340 (584)
T ss_dssp HTTC-TTSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred hccC-CCCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHHHHHHHh
Confidence 9999 6999999999999999998766666666555556666666654
No 16
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=99.98 E-value=8.4e-32 Score=287.97 Aligned_cols=202 Identities=21% Similarity=0.286 Sum_probs=169.1
Q ss_pred ccccCCCCCccEEEEcCCHHHHHHHHHHHHH-cCCcEEEEcCCCCCCCCCcccCCCeEEEEcCCCCCeEEcC-----CC-
Q 040771 65 KFLIASTPKPLAILTAKHESHVQATVICAKQ-AGLELRIRSGGHDYDGLSYISTVPFVILDMFNLRSIDIDI-----AN- 137 (496)
Q Consensus 65 r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~-~~~~~~~~ggGh~~~g~~~~~~~~g~vIdl~~l~~i~id~-----~~- 137 (496)
.|+......|.+||+|+|++||+++|++|++ +++||++||||||+.|.+... ++++|||++||+|++|+ ++
T Consensus 53 d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~~~~--~gvvidl~~m~~i~i~~~~~~~~~~ 130 (524)
T 2exr_A 53 DFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAMAE--GGLVVDMSTTAENHFEVGYLSGGDA 130 (524)
T ss_dssp CTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTTCCT--TSEEEEGGGGTTSCEEEEECCSSSS
T ss_pred cccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcccCC--CEEEEECcCCCCcEEeecccCCCCC
Confidence 4655556789999999999999999999996 999999999999999876543 48999999999987776 55
Q ss_pred -CEEEEeCCccHHHHHHH-HHhcCCccccccCCCCccccccccccCCCCCCccccccccceeeEEEEEeeCCeEEe-ccC
Q 040771 138 -ETAWVQAGATLGELYFK-IANTSKVHAFPAGVCHSLGVGGHISGGGYGNLLRKYGISVDNVIDAQLVDVKGRILN-RES 214 (496)
Q Consensus 138 -~~v~v~aG~~~~~l~~~-l~~~g~~l~~~~G~~~~vgvgG~~~ggg~g~~s~~~G~~~D~v~~~~vV~~~G~~v~-~~~ 214 (496)
.+++||||++|.++++. ++++|+. ....++++.++|||.+.++|.|..+.+||.++|+|++++||++||++++ ...
T Consensus 131 ~~~v~v~aGv~~~~l~~~~l~~~Gl~-~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~~~~ 209 (524)
T 2exr_A 131 TAFVDVSGGALWEDVLKRCVSEYGLA-PRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCSEI 209 (524)
T ss_dssp SEEEEEETTCBHHHHHHHHHHHHSEE-CSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEEESS
T ss_pred ceEEEEeCCcCHHHHHHHHHHHcCCC-CCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEECCC
Confidence 79999999999998655 5488843 1223556678999999999999999999999999999999999999998 445
Q ss_pred CCccchhhhccccCCCeEEEEEEEEEEEeeCceeEEEEEeccchhhHHHHHHHHHH
Q 040771 215 MGEDLFWAIRGGGGASFGVILAWKIKLVAVPEKVTLFKVDKTLAQGATDVLYKWQY 270 (496)
Q Consensus 215 ~~~dLf~a~rG~g~g~~GIVt~~t~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (496)
+++||||++||+ .|+|||||++|||++|.|+...+..+.+...+++.+.+..+.+
T Consensus 210 ~~~dL~~~~~Gs-~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~~~l~~ 264 (524)
T 2exr_A 210 ENSELFFSVLGG-LGQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDAEWLVS 264 (524)
T ss_dssp SSHHHHHHHTTC-TTSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHHHHT
T ss_pred CChhHHhHhhcC-CCccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHHHHHHH
Confidence 679999999999 6999999999999999998766666666554555555555543
No 17
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=99.97 E-value=3.3e-31 Score=279.85 Aligned_cols=197 Identities=19% Similarity=0.229 Sum_probs=165.8
Q ss_pred ccccCCCCCccEEEEcCCHHHHHHHHHHHHHc--CCcEEEEcCCCCCCCCCcccCCCeEEEEcCCCCCe-EEcCCCCEEE
Q 040771 65 KFLIASTPKPLAILTAKHESHVQATVICAKQA--GLELRIRSGGHDYDGLSYISTVPFVILDMFNLRSI-DIDIANETAW 141 (496)
Q Consensus 65 r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~--~~~~~~~ggGh~~~g~~~~~~~~g~vIdl~~l~~i-~id~~~~~v~ 141 (496)
+|.. ....|.+|++|+|++||+++|++|+++ ++|+.++|+|||+.+.+.. .+|++|||++||+| ++|+++++|+
T Consensus 35 ~W~~-~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~--~~gvvIdl~~l~~i~~~d~~~~~v~ 111 (481)
T 4feh_A 35 GWGR-TAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQN--GGGLVIDMTPLNTIHSIDADTKLVD 111 (481)
T ss_dssp CTTC-CSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCC--TTSEEEECTTCCCEEEEETTTTEEE
T ss_pred cccC-CCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCC--cCeEEEECccCCCceEEcCCCCEEE
Confidence 5754 468899999999999999999999999 7999999999999776543 24899999999998 8999999999
Q ss_pred EeCCccHHHHHHHHHhcCCccccccCCCCccccccccccCCCCCCccccccccceeeEEEEEeeCCeEEe-ccC-CCccc
Q 040771 142 VQAGATLGELYFKIANTSKVHAFPAGVCHSLGVGGHISGGGYGNLLRKYGISVDNVIDAQLVDVKGRILN-RES-MGEDL 219 (496)
Q Consensus 142 v~aG~~~~~l~~~l~~~g~~l~~~~G~~~~vgvgG~~~ggg~g~~s~~~G~~~D~v~~~~vV~~~G~~v~-~~~-~~~dL 219 (496)
||||+++.+|+++|.++|+.+...+|. ..++|||.+.+|++|..++.||..+|+|++++||++||++++ +.. +++||
T Consensus 112 v~aGv~l~~L~~~l~~~Gl~l~~~~g~-~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~~~~dL 190 (481)
T 4feh_A 112 IDAGVNLDQLMKAALPFGLWVPVLPGT-RQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTGEDAEL 190 (481)
T ss_dssp EETTCBHHHHHHHHGGGTEECSCCCSC-SCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSSTTHHH
T ss_pred EcCCccHHHHHHHHHHcCCEEEEeCCc-CccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCCCChHH
Confidence 999999999999999999543332344 578999999999999999999999999999999999999998 444 68999
Q ss_pred hhhhccccCCCeEEEEEEEEEEEeeCceeEEE-EEeccchhhHHHHHHHHH
Q 040771 220 FWAIRGGGGASFGVILAWKIKLVAVPEKVTLF-KVDKTLAQGATDVLYKWQ 269 (496)
Q Consensus 220 f~a~rG~g~g~~GIVt~~t~~l~p~~~~~~~~-~~~~~~~~~~~~~~~~~~ 269 (496)
||++||| .|+|||||+++||++|.++..... ...+ .+..++++.+.
T Consensus 191 f~a~rgs-~G~~GIIt~~tl~l~p~~~~~~~~~~~~~---~~l~~~~~~~~ 237 (481)
T 4feh_A 191 FWATVGG-NGLTGIIMRATIEMTPTSTAYFIADGDVT---ASLDETIALHS 237 (481)
T ss_dssp HHHHTTC-TTTTCEEEEEEEECEECSCSEEEEEEEEC---SSHHHHHHHHS
T ss_pred HHHhhcc-CCCceEEEEEEEEEEeCCccEEEEEEEeC---CCHHHHHHHHH
Confidence 9999999 799999999999999987643222 2222 23445555554
No 18
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.97 E-value=1.3e-30 Score=278.98 Aligned_cols=196 Identities=21% Similarity=0.242 Sum_probs=162.2
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCC-CCCcccCCCeEEEEcCCCCCe-EEcCCCCEEEEeCCccH
Q 040771 71 TPKPLAILTAKHESHVQATVICAKQAGLELRIRSGGHDYD-GLSYISTVPFVILDMFNLRSI-DIDIANETAWVQAGATL 148 (496)
Q Consensus 71 ~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~-g~~~~~~~~g~vIdl~~l~~i-~id~~~~~v~v~aG~~~ 148 (496)
...|.+||+|+|++||+++|++|+++++|+.++|+|||+. |.+.....++++|||++||+| ++|+++.+++||||+++
T Consensus 54 ~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~~ 133 (520)
T 1wvf_A 54 AHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTF 133 (520)
T ss_dssp GGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCSSTTCEEEECTTCCCEEEEETTTTEEEECTTCCH
T ss_pred CCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCCCCCCCeEEEECCCCCceEEECCCCCEEEECCCCCH
Confidence 4689999999999999999999999999999999999986 654421235899999999999 99999999999999999
Q ss_pred HHHHHHHHhcCCccccccC---CCCccccccccccCCCCCCccccccccceeeEEEEEeeCCeEEecc---CCCccchhh
Q 040771 149 GELYFKIANTSKVHAFPAG---VCHSLGVGGHISGGGYGNLLRKYGISVDNVIDAQLVDVKGRILNRE---SMGEDLFWA 222 (496)
Q Consensus 149 ~~l~~~l~~~g~~l~~~~G---~~~~vgvgG~~~ggg~g~~s~~~G~~~D~v~~~~vV~~~G~~v~~~---~~~~dLf~a 222 (496)
.+|+++|.++|+. ++.+ ....+||||.+++||.|.. +||..+|+|+++|||++||++++.. ..++|+|++
T Consensus 134 ~~l~~~l~~~Gl~--~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~~~ 209 (520)
T 1wvf_A 134 GQMYDYIQENNLP--VMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQI 209 (520)
T ss_dssp HHHHHHHHHTTCS--EECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSCTTT
T ss_pred HHHHHHHHHcCCc--ccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeeeEEEcCCCcEEEeCCCcCCCchhHhh
Confidence 9999999999954 4333 3337899999999988875 9999999999999999999999832 357898777
Q ss_pred hccccC---------CCeEEEEEEEEEEEeeCceeEEEEEeccchhhHHHHHHHHHH
Q 040771 223 IRGGGG---------ASFGVILAWKIKLVAVPEKVTLFKVDKTLAQGATDVLYKWQY 270 (496)
Q Consensus 223 ~rG~g~---------g~~GIVt~~t~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (496)
.||+.+ ++|||||+++||++|.|+....+.+.++..+++.+++..+++
T Consensus 210 ~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~~~~~~~~ 266 (520)
T 1wvf_A 210 FKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALRP 266 (520)
T ss_dssp CSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHHHHHHHHH
T ss_pred hcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHH
Confidence 776622 499999999999999998766666666655555555544444
No 19
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.97 E-value=3.9e-30 Score=277.04 Aligned_cols=198 Identities=13% Similarity=0.082 Sum_probs=165.4
Q ss_pred CCeEEcC-CCCChHHHHHhhhcccccccCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCcccC---
Q 040771 42 SDVIFTQ-NHSNFQSVLNAYIKNRKFLIASTPKPLAILTAKHESHVQATVICAKQAGLELRIRSGGHDYDGLSYIST--- 117 (496)
Q Consensus 42 ~~~v~~p-~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~--- 117 (496)
++.+++| +++.|+... .+|+......|.+|++|+|++||+++|++|+++++|++++|+|||+.+.+...+
T Consensus 9 ~~~~~~p~~~~~y~~~~------~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~ 82 (561)
T 2i0k_A 9 PTPPNFPNDIALFQQAY------QNWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANV 82 (561)
T ss_dssp CCCTTCCTTSCCEEEEE------ECTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCC
T ss_pred CCceecCCCCHhHHHHH------hhhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcC
Confidence 5568888 999999742 358777778899999999999999999999999999999999999976543322
Q ss_pred CCeEEEEc-CCCCCeEEcC--CCCEEEEeCCccHHHHHHHHHhcCCccccccCCCCccccccccccCCCCCC--------
Q 040771 118 VPFVILDM-FNLRSIDIDI--ANETAWVQAGATLGELYFKIANTSKVHAFPAGVCHSLGVGGHISGGGYGNL-------- 186 (496)
Q Consensus 118 ~~g~vIdl-~~l~~i~id~--~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~G~~~~vgvgG~~~ggg~g~~-------- 186 (496)
.++++||| ++||+|++|+ ++++|+||||+++.+|.++|.++|+.+.. .+..+.++|||.+.+|++|..
T Consensus 83 ~~gvvIdl~~~l~~i~vd~~~~~~~v~v~aGv~l~~L~~~l~~~Gl~l~~-~~~~~~~TvGG~i~~~~~G~~l~~gG~~~ 161 (561)
T 2i0k_A 83 EKVILADTMTHLNGITVNTGGPVATVTAGAGASIEAIVTELQKHDLGWAN-LPAPGVLSIGGALAVNAHGAALPAVGQTT 161 (561)
T ss_dssp TTEEEEECTTTSCCEEEECCSSSCEEEEETTSBHHHHHHHHHHTTEECSS-CCSCTTCBHHHHHHTTCCCSCCCCTTCCC
T ss_pred CCeEEEechhhCCceEecCcCCccEEEEcCCCCHHHHHHHHHHcCCcccc-cCCCCCcccCCCcccCCcccccccCCccc
Confidence 24899999 8999999998 78899999999999999999999944322 233466889999887777765
Q ss_pred --ccccccccceeeEEEEEeeCCe---EEeccCCCccchhhhccccCCCeEEEEEEEEEEEeeCceeE
Q 040771 187 --LRKYGISVDNVIDAQLVDVKGR---ILNRESMGEDLFWAIRGGGGASFGVILAWKIKLVAVPEKVT 249 (496)
Q Consensus 187 --s~~~G~~~D~v~~~~vV~~~G~---~v~~~~~~~dLf~a~rG~g~g~~GIVt~~t~~l~p~~~~~~ 249 (496)
++.||..+|+|+++|||++||+ +++...+++||+|+++|. |. ||||++|||++|.++...
T Consensus 162 ~s~~~~G~~~d~V~~~evV~~dG~~~~~~~~~~~~~dl~~a~~g~--G~-giIt~~tl~l~p~~~~~~ 226 (561)
T 2i0k_A 162 LPGHTYGSLSNLVTELTAVVWNGTTYALETYQRNDPRITPLLTNL--GR-CFLTSVTMQAGPNFRQRC 226 (561)
T ss_dssp CTTCCSSCGGGGEEEEEEEEECSSSEEEEEEETTSGGGHHHHSCT--TS-SCEEEEEEECEECCEEEE
T ss_pred ccccccccHhheEEEEEEEeCCCCEEEeeeccCCCccHHHHHhcC--CC-EEEEEEEEEEEECCceEE
Confidence 6789999999999999999999 666444579999999966 33 899999999999987543
No 20
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.96 E-value=1.5e-28 Score=264.91 Aligned_cols=199 Identities=17% Similarity=0.115 Sum_probs=161.4
Q ss_pred CCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCC-CCCcccCCCeEEEEc-CCCCCe-EEcCCCCEEEEeCCc
Q 040771 70 STPKPLAILTAKHESHVQATVICAKQAGLELRIRSGGHDYD-GLSYISTVPFVILDM-FNLRSI-DIDIANETAWVQAGA 146 (496)
Q Consensus 70 ~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~-g~~~~~~~~g~vIdl-~~l~~i-~id~~~~~v~v~aG~ 146 (496)
....|.+||+|+|++||+++|++|+++++|+++||+|||+. |.+.....++++||| ++||+| ++|+++.+++||||+
T Consensus 67 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~aGv 146 (560)
T 1e8g_A 67 DYFLASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGV 146 (560)
T ss_dssp TSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTC
T ss_pred cccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeCCC
Confidence 34679999999999999999999999999999999999976 544321124899999 999998 999999999999999
Q ss_pred cHHHHHHHHHhcCCc--cccccCCCCccccccccccCCCCCCccccccccceeeEEEEEeeCCeEEecc---CCCc----
Q 040771 147 TLGELYFKIANTSKV--HAFPAGVCHSLGVGGHISGGGYGNLLRKYGISVDNVIDAQLVDVKGRILNRE---SMGE---- 217 (496)
Q Consensus 147 ~~~~l~~~l~~~g~~--l~~~~G~~~~vgvgG~~~ggg~g~~s~~~G~~~D~v~~~~vV~~~G~~v~~~---~~~~---- 217 (496)
++.+|+++|.++|+. +++.++.....||||.++++|.|.. .||..+|+|+++|||++||++++.. ..++
T Consensus 147 ~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~~~ 224 (560)
T 1e8g_A 147 TYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRPE 224 (560)
T ss_dssp BHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCGG
T ss_pred CHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCcccccc
Confidence 999999999999965 4333344446789999988888864 9999999999999999999999732 1221
Q ss_pred -----------cchhhhcccc----------CCCeEEEEEEEEEEEeeCceeEEEEEeccchhhHHHHHHHHHH
Q 040771 218 -----------DLFWAIRGGG----------GASFGVILAWKIKLVAVPEKVTLFKVDKTLAQGATDVLYKWQY 270 (496)
Q Consensus 218 -----------dLf~a~rG~g----------~g~~GIVt~~t~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (496)
+++|+++++| +|+|||||++|||++|.|+....+.+.++..+++.+++..+++
T Consensus 225 ~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~ 298 (560)
T 1e8g_A 225 TMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRP 298 (560)
T ss_dssp GTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHH
T ss_pred cccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHH
Confidence 6677776542 3799999999999999998766666767655566566555544
No 21
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.96 E-value=2e-29 Score=266.51 Aligned_cols=189 Identities=16% Similarity=0.177 Sum_probs=155.0
Q ss_pred CCCChHHHHHhhhcccccccCCCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCccc---CCCeEEEEc
Q 040771 49 NHSNFQSVLNAYIKNRKFLIASTPKPLAILTAKHESHVQATVICAKQAGLELRIRSGGHDYDGLSYIS---TVPFVILDM 125 (496)
Q Consensus 49 ~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~---~~~g~vIdl 125 (496)
+-+.|+... .+|+......|.+|++|+|++||+++|++|+++++||+++|+|||+.+.+... ..++++|||
T Consensus 11 ~i~~y~~~~------~nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdl 84 (540)
T 3js8_A 11 EIPLYKQSF------KNWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDT 84 (540)
T ss_dssp TSCCEEEEE------ECTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEET
T ss_pred ccchhccee------eccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCCCCCCeEEEEC
Confidence 445665532 25888778899999999999999999999999999999999999986332222 125899999
Q ss_pred C-CCCCeEEcCC--CCEEEEeCCccHHHHHHHHHhcCCcccccc-CCCCccccccccccCCCCCC----------ccccc
Q 040771 126 F-NLRSIDIDIA--NETAWVQAGATLGELYFKIANTSKVHAFPA-GVCHSLGVGGHISGGGYGNL----------LRKYG 191 (496)
Q Consensus 126 ~-~l~~i~id~~--~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~-G~~~~vgvgG~~~ggg~g~~----------s~~~G 191 (496)
+ +||+|++|++ ..+|+||||+++.+|+++|.++| +.++. +..+.++|||++++|++|.. ++.||
T Consensus 85 s~~Ln~I~vD~~~~~~tVtV~AGv~l~~L~~~L~~~G--L~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G 162 (540)
T 3js8_A 85 TRYLTAMSIDASGPVAKVTAQAGITMEALLTGLEKAG--LGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYG 162 (540)
T ss_dssp TTTCCCEEEECSSSSEEEEEETTSBHHHHHHHHHHTT--EECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSS
T ss_pred cCcCCCEEECCCCCccEEEEccCCCHHHHHHHHHHcC--CEEEecCCCCCeEEcccccCCCCcccccccccccccccccc
Confidence 5 7999999985 57999999999999999999999 44442 34567899999999999885 68999
Q ss_pred cccceeeEEEEEeeCCe-----EEeccCCCccchhhhccccCCCeEEEEEEEEEEEeeCcee
Q 040771 192 ISVDNVIDAQLVDVKGR-----ILNRESMGEDLFWAIRGGGGASFGVILAWKIKLVAVPEKV 248 (496)
Q Consensus 192 ~~~D~v~~~~vV~~~G~-----~v~~~~~~~dLf~a~rG~g~g~~GIVt~~t~~l~p~~~~~ 248 (496)
..+|+|++++||++||+ +++.+.+++||| ++|+| .|. ||||++|||++|.++..
T Consensus 163 ~~~D~V~~levV~adG~~~~~~i~~~s~~~~DL~-a~r~G-~G~-gIVTevtlrl~P~~~l~ 221 (540)
T 3js8_A 163 SISNLVLSLTAVVYDKASGAYALRKFARNDPQIA-PLLAH-VGR-SLIVEATLQAAPNQRLR 221 (540)
T ss_dssp CGGGGEEEEEEEEEETTTTEEEEEEEETTSGGGH-HHHTC-TTS-SCEEEEEEEEEECCEEE
T ss_pred cHHHhEEEEEEEcCCCCCceeeEEEeCCCChhHH-HHHhc-CCC-eEEEEEEEEEEECCceE
Confidence 99999999999999998 666444689985 55555 355 69999999999998643
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.96 E-value=1.5e-28 Score=263.53 Aligned_cols=198 Identities=14% Similarity=0.128 Sum_probs=165.8
Q ss_pred CCCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCcccCC----CeEEEEcCCCCCe-EEcCCCCEEEEeC
Q 040771 70 STPKPLAILTAKHESHVQATVICAKQAGLELRIRSGGHDYDGLSYISTV----PFVILDMFNLRSI-DIDIANETAWVQA 144 (496)
Q Consensus 70 ~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~----~g~vIdl~~l~~i-~id~~~~~v~v~a 144 (496)
....|.+||+|+|++||+++|++|+++++||.++|||||+.|.+...+. ++++|||++||+| ++|+ +++|+|||
T Consensus 42 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v~v~a 120 (571)
T 1f0x_A 42 GQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQVLAYP 120 (571)
T ss_dssp CBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETT-TTEEEECT
T ss_pred cCCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeECC-CCeEEEcC
Confidence 3478999999999999999999999999999999999999887665432 3899999999998 6985 57999999
Q ss_pred CccHHHHHHHHHhcCCcccccc-CCCCccccccccccCCCCCCccccccccc----------------eeeEEEEEeeCC
Q 040771 145 GATLGELYFKIANTSKVHAFPA-GVCHSLGVGGHISGGGYGNLLRKYGISVD----------------NVIDAQLVDVKG 207 (496)
Q Consensus 145 G~~~~~l~~~l~~~g~~l~~~~-G~~~~vgvgG~~~ggg~g~~s~~~G~~~D----------------~v~~~~vV~~~G 207 (496)
|+++.+|.++|.++|+.++... ++|..++|||.+.++++|..+.+||..+| +|++++||++||
T Consensus 121 Gv~l~~L~~~l~~~Gl~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~dG 200 (571)
T 1f0x_A 121 GTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPE 200 (571)
T ss_dssp TCBHHHHHHHHGGGTEECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSSHH
T ss_pred CcCHHHHHHHHHhcCccCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeEEEEcCCC
Confidence 9999999999999995322222 34556789999999999999999999999 999999999999
Q ss_pred eEEecc----------------CC--Cc-----------------cchhhh--ccccCCCeEEEEEEEEEEEeeCceeEE
Q 040771 208 RILNRE----------------SM--GE-----------------DLFWAI--RGGGGASFGVILAWKIKLVAVPEKVTL 250 (496)
Q Consensus 208 ~~v~~~----------------~~--~~-----------------dLf~a~--rG~g~g~~GIVt~~t~~l~p~~~~~~~ 250 (496)
++++.. .. ++ ||+|++ +|+ .|+||| |++|||++|.|+....
T Consensus 201 ~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~Gs-eGtlGV-t~~tl~l~p~p~~~~~ 278 (571)
T 1f0x_A 201 QILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGC-AGKLAV-FAVRLDTFEAEKNQQV 278 (571)
T ss_dssp HHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTC-TTSSEE-EEEEEECEECCSSCEE
T ss_pred cEEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCC-CCceeE-EEEEEEEEecCCeEEE
Confidence 998621 12 23 888888 998 799999 9999999999987666
Q ss_pred EEEeccchhhHHHHHHHHHH
Q 040771 251 FKVDKTLAQGATDVLYKWQY 270 (496)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~ 270 (496)
+.+.++..+++.+++..+.+
T Consensus 279 ~~~~~~~~~~a~~~~~~~~~ 298 (571)
T 1f0x_A 279 FYIGTNQPEVLTEIRRHILA 298 (571)
T ss_dssp EEEEESCHHHHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHH
Confidence 66666655666777777764
No 23
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.92 E-value=1.8e-25 Score=226.00 Aligned_cols=164 Identities=15% Similarity=0.066 Sum_probs=145.3
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCcccCCCeEEEEcCCCCCeEEcC--CCCEEEEeCCccH
Q 040771 71 TPKPLAILTAKHESHVQATVICAKQAGLELRIRSGGHDYDGLSYISTVPFVILDMFNLRSIDIDI--ANETAWVQAGATL 148 (496)
Q Consensus 71 ~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~g~vIdl~~l~~i~id~--~~~~v~v~aG~~~ 148 (496)
...|.++|+|+|++||+++|++|+++++|+.++|+|||+.+... .+|+||+++ |++|++++ ++.+++|+||++|
T Consensus 28 gg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~---~~GvVI~l~-~~~i~v~~~~~~~~v~v~AG~~~ 103 (357)
T 3i99_A 28 EQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH---YTGMIVVNR-LNGIEHQQDDDYHRLHVAGGEDW 103 (357)
T ss_dssp SCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC---EEEEEEEEC-CCCEEEEECSSEEEEEEETTSBH
T ss_pred CccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC---CCeEEEEcC-CCceEEeccCCceEEEEeCCCcH
Confidence 36788999999999999999999999999999999999875532 348999998 99998754 4568999999999
Q ss_pred HHHHHHHHhcCCccccccCCCCccccccccccCCCCCCcccccc-ccceeeEEEEEee-CCeEEeccCCCccchhhhccc
Q 040771 149 GELYFKIANTSKVHAFPAGVCHSLGVGGHISGGGYGNLLRKYGI-SVDNVIDAQLVDV-KGRILNRESMGEDLFWAIRGG 226 (496)
Q Consensus 149 ~~l~~~l~~~g~~l~~~~G~~~~vgvgG~~~ggg~g~~s~~~G~-~~D~v~~~~vV~~-~G~~v~~~~~~~dLf~a~rG~ 226 (496)
.+|.+++.++| | .|.++.+||+| +.||+.+++.+.||. ++|+|+++++|++ +|++++... .||+|+||++
T Consensus 104 ~~l~~~a~~~G--l---~GlE~l~gIPG-tVGGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~~--~dl~f~YR~s 175 (357)
T 3i99_A 104 PSLVSWCVEQG--I---GGLENLALIPG-CAGSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLTM--EECQFGYRDS 175 (357)
T ss_dssp HHHHHHHHHTT--C---TTCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEET--GGGCCBTTBC
T ss_pred HHHHHHHHHcC--C---cCccccCCCCc-hhHHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEeH--HHcCcccccc
Confidence 99999999998 5 58899999999 789999999999996 8999999999999 999998443 6999999988
Q ss_pred cC----CCeEEEEEEEEEEEeeCc
Q 040771 227 GG----ASFGVILAWKIKLVAVPE 246 (496)
Q Consensus 227 g~----g~~GIVt~~t~~l~p~~~ 246 (496)
.. +++||||+++|||+|.++
T Consensus 176 ~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 176 IFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp GGGTTTTTTEEEEEEEEEEESSCC
T ss_pred cCCCccCCCEEEEEEEEEEEeCCc
Confidence 54 379999999999999764
No 24
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.92 E-value=1.3e-25 Score=224.81 Aligned_cols=164 Identities=21% Similarity=0.148 Sum_probs=128.7
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCcccCCCeEEEEcCCCCCeEEcCCCCEEEEeCCccHHH
Q 040771 71 TPKPLAILTAKHESHVQATVICAKQAGLELRIRSGGHDYDGLSYISTVPFVILDMFNLRSIDIDIANETAWVQAGATLGE 150 (496)
Q Consensus 71 ~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~g~vIdl~~l~~i~id~~~~~v~v~aG~~~~~ 150 (496)
...|.++++|+|++||+++|++|+++++|+.++|+|||+.+... +.++++|||++|++|.+| +.+++|+||++|.+
T Consensus 52 gg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~~--~~~gvvI~l~~~~~I~~d--~~~v~v~aG~~~~~ 127 (322)
T 3tx1_A 52 GGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDG--GIRGVILHLDLLQTIERN--NTQIVAMSGAKLID 127 (322)
T ss_dssp CCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEECTT--CEEEEEEECTTCCCEEEE--TTEEEEETTSBHHH
T ss_pred CceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcCCC--CCCeEEEECCCCCcEEEC--CCEEEEecCcCHHH
Confidence 46899999999999999999999999999999999999875422 224899999999999876 35999999999999
Q ss_pred HHHHHHhcCCccccccCCCCccccccccccCCCCCCcccc-ccccceeeEEEEEeeCCeEEeccCCCccchhhhccccCC
Q 040771 151 LYFKIANTSKVHAFPAGVCHSLGVGGHISGGGYGNLLRKY-GISVDNVIDAQLVDVKGRILNRESMGEDLFWAIRGGGGA 229 (496)
Q Consensus 151 l~~~l~~~g~~l~~~~G~~~~vgvgG~~~ggg~g~~s~~~-G~~~D~v~~~~vV~~~G~~v~~~~~~~dLf~a~rG~g~g 229 (496)
|++++.++| +. |.+...+++| +.||...++++.| |.++|+|+++++|++||++++... +|++|+||++..+
T Consensus 128 l~~~l~~~G--l~---Gle~~~giPg-TVGGav~~NaGgyGg~~~d~v~~vevV~~~G~i~~~~~--~~~~~~yR~s~~g 199 (322)
T 3tx1_A 128 TAKFALNES--LS---GLEFACGIPG-SIGGALHMNAGAYGGEISDVLEAATVLTQTGELKKLKR--SELKAAYRFSTIA 199 (322)
T ss_dssp HHHHHHHTT--EE---SCGGGTTCCS-BHHHHHHHTCEETTEEHHHHEEEEEEECTTSCEEEEEG--GGCC--CC-CTTT
T ss_pred HHHHHHHcC--Cc---ccccCCCCcc-hhHHHHHhCccCcccchHhhEEEEEEEcCCCCEEEech--HHcCcchhhcccC
Confidence 999999998 42 2233333333 1222233333345 699999999999999999998443 7999999987544
Q ss_pred -CeEEEEEEEEEEEeeCc
Q 040771 230 -SFGVILAWKIKLVAVPE 246 (496)
Q Consensus 230 -~~GIVt~~t~~l~p~~~ 246 (496)
++||||+++||++|.|+
T Consensus 200 ~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 200 EKNYIVLDATFSLALEEK 217 (322)
T ss_dssp GGGCEEEEEEEECEECCH
T ss_pred CCCEEEEEEEEEEEeCCH
Confidence 57899999999999864
No 25
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.91 E-value=9.7e-25 Score=219.60 Aligned_cols=159 Identities=17% Similarity=0.155 Sum_probs=128.3
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCcccCCCeEEEEcCCCCCeEEcCCCCEEEEeCCccHHH
Q 040771 71 TPKPLAILTAKHESHVQATVICAKQAGLELRIRSGGHDYDGLSYISTVPFVILDMFNLRSIDIDIANETAWVQAGATLGE 150 (496)
Q Consensus 71 ~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~g~vIdl~~l~~i~id~~~~~v~v~aG~~~~~ 150 (496)
...|.++++|+|++||+++|++|+++++|+.++|||||+.+..... ++++|||++||+|++|. .+++||||++|.+
T Consensus 46 ~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~~~--~gvvI~l~~m~~i~id~--~~v~v~aGv~~~~ 121 (326)
T 1hsk_A 46 GGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGI--RGIVISLLSLDHIEVSD--DAIIAGSGAAIID 121 (326)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTTCE--EEEEEECTTCCCEEEET--TEEEEETTSBHHH
T ss_pred CCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCCCC--CeEEEEeCCCCceEEcC--CEEEEeCCCcHHH
Confidence 4679999999999999999999999999999999999987553322 48999999999998873 6999999999999
Q ss_pred HHHHHHhcCCc-cccccCCCCccccccccccCCCCCCccccc-cccceeeEEEEEeeCCeEEeccCCCccchhhhcccc-
Q 040771 151 LYFKIANTSKV-HAFPAGVCHSLGVGGHISGGGYGNLLRKYG-ISVDNVIDAQLVDVKGRILNRESMGEDLFWAIRGGG- 227 (496)
Q Consensus 151 l~~~l~~~g~~-l~~~~G~~~~vgvgG~~~ggg~g~~s~~~G-~~~D~v~~~~vV~~~G~~v~~~~~~~dLf~a~rG~g- 227 (496)
|++++.++|+. |...++... +|||.+.. +++.|| .++|+|++++||++||++++... .|++|++|...
T Consensus 122 l~~~l~~~Gl~gLe~~~~~Pg--tvGG~i~~-----naggyG~~~~d~v~~v~vv~~~G~i~~~~~--~~~~~gyr~~~l 192 (326)
T 1hsk_A 122 VSRVARDYALTGLEFACGIPG--SIGGAVYM-----NAGAYGGEVKDCIDYALCVNEQGSLIKLTT--KELELDYRNSII 192 (326)
T ss_dssp HHHHHHHTTEESCGGGTTCCS--BHHHHHHH-----TCEETTEEHHHHEEEEEEECTTSCEEEEET--TTTTCBTTBCHH
T ss_pred HHHHHHHCCCccccccCCCcc--hhhHHHhc-----ccccCchhhhhhEEEEEEEeCCCCEEEECh--HHcCCCcccccc
Confidence 99999999841 001122111 35555544 334488 99999999999999999998443 48899999742
Q ss_pred --CCCeEEEEEEEEEEEee
Q 040771 228 --GASFGVILAWKIKLVAV 244 (496)
Q Consensus 228 --~g~~GIVt~~t~~l~p~ 244 (496)
.| ||||+++||++|.
T Consensus 193 ~s~g--gIIt~~~l~l~p~ 209 (326)
T 1hsk_A 193 QKEH--LVVLEAAFTLAPG 209 (326)
T ss_dssp HHTT--CEEEEEEEECEEC
T ss_pred CCCC--EEEEEEEEEEEcC
Confidence 23 9999999999998
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.91 E-value=7.4e-24 Score=213.53 Aligned_cols=163 Identities=15% Similarity=0.073 Sum_probs=143.3
Q ss_pred CCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCcccCCCeEEEEcCCCCCeE-EcCCC-CEEEEeCCccHH
Q 040771 72 PKPLAILTAKHESHVQATVICAKQAGLELRIRSGGHDYDGLSYISTVPFVILDMFNLRSID-IDIAN-ETAWVQAGATLG 149 (496)
Q Consensus 72 ~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~g~vIdl~~l~~i~-id~~~-~~v~v~aG~~~~ 149 (496)
..|.++++|+|++||+++|++|+++++|+.++|||||+.+... .+|+||+|+ |++|. ++.++ .+++|+||++|.
T Consensus 13 g~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~---~~GvVI~l~-~~~i~~i~~~~~~~v~vgAG~~~~ 88 (340)
T 1uxy_A 13 HNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED---YRGTVIINR-IKGIEIHDEPDAWYLHVGAGENWH 88 (340)
T ss_dssp CBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC---EEEEEEEEC-CCCEEEEECSSEEEEEEETTSBHH
T ss_pred ccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC---CCeEEEEcc-CCCcEEEecCCCeEEEEecCCCHH
Confidence 5689999999999999999999999999999999999876531 358999996 99985 56666 689999999999
Q ss_pred HHHHHHHhcCCccccccCCCCccccccccccCCCCCCccccc-cccceeeEEEEEee-CCeEEeccCCCccchhhhcccc
Q 040771 150 ELYFKIANTSKVHAFPAGVCHSLGVGGHISGGGYGNLLRKYG-ISVDNVIDAQLVDV-KGRILNRESMGEDLFWAIRGGG 227 (496)
Q Consensus 150 ~l~~~l~~~g~~l~~~~G~~~~vgvgG~~~ggg~g~~s~~~G-~~~D~v~~~~vV~~-~G~~v~~~~~~~dLf~a~rG~g 227 (496)
+|.+++.++| + .|.++.+||+| ++||+..++.+.|| .++|+|+++++|++ +|++++... .|++|+||++.
T Consensus 89 ~l~~~~~~~G--l---~Gle~~~gIPG-tVGGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~~~~~--~d~~~gYR~s~ 160 (340)
T 1uxy_A 89 RLVKYTLQEG--M---PGLENLALIPG-CVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLTA--KECRFGYRDSI 160 (340)
T ss_dssp HHHHHHHHTT--C---CSCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEET--GGGTCBTTBCG
T ss_pred HHHHHHHHCC--C---CccccccCCcc-chhHHHHhccccchhhHHhheeEEEEEECCCCcEEEEeH--HHhccccCcCc
Confidence 9999999998 5 68889999998 88999999999999 48999999999996 999988443 79999999874
Q ss_pred C----CCeEEEEEEEEEEEeeCc
Q 040771 228 G----ASFGVILAWKIKLVAVPE 246 (496)
Q Consensus 228 ~----g~~GIVt~~t~~l~p~~~ 246 (496)
. +++||||+++||++|.++
T Consensus 161 ~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 161 FKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp GGTTTTTTEEEEEEEEEEESSCC
T ss_pred cCCcCCCCEEEEEEEEEEEcCCC
Confidence 2 259999999999999764
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.88 E-value=7.1e-23 Score=199.44 Aligned_cols=151 Identities=20% Similarity=0.200 Sum_probs=130.4
Q ss_pred CCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCcccCCC-eEEEEcCCCCCeEEcCCCCEEEEeCCccHHH
Q 040771 72 PKPLAILTAKHESHVQATVICAKQAGLELRIRSGGHDYDGLSYISTVP-FVILDMFNLRSIDIDIANETAWVQAGATLGE 150 (496)
Q Consensus 72 ~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~-g~vIdl~~l~~i~id~~~~~v~v~aG~~~~~ 150 (496)
..|. +++|+|++||+++| ++|+.++|+|||+.+.. ...+ |+||++++|++|++|. +|+||++|.+
T Consensus 21 g~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d--~~~~~GvVI~l~~~~~I~vd~-----~v~aG~~~~~ 86 (268)
T 2gqt_A 21 GPAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVLD--EGVPERVIRLAGEFQTYDLKG-----WVGAGTLLPL 86 (268)
T ss_dssp CEEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEECT--TCCSSEEEEECGGGGCBCTTS-----EEETTSBHHH
T ss_pred cceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceecC--CCcCCeEEEEcCCCCCcEEcC-----EEECCCCHHH
Confidence 3466 99999999999999 89999999999987652 2223 8999999999998752 9999999999
Q ss_pred HHHHHHhcCCccccccCCCCccccccccccCCCCCCccccc-cccceeeEEEEEeeCCeEEeccCCCccchhhhccccCC
Q 040771 151 LYFKIANTSKVHAFPAGVCHSLGVGGHISGGGYGNLLRKYG-ISVDNVIDAQLVDVKGRILNRESMGEDLFWAIRGGGGA 229 (496)
Q Consensus 151 l~~~l~~~g~~l~~~~G~~~~vgvgG~~~ggg~g~~s~~~G-~~~D~v~~~~vV~~~G~~v~~~~~~~dLf~a~rG~g~g 229 (496)
|.+++.++| | .|.++.++|+| ++||+.+++++.|| .++|+|+++++| +||++++... .|++|+||++...
T Consensus 87 l~~~~~~~G--l---~Gle~~~giPG-tvGGav~~NaGayG~e~~d~v~~v~vv-~~G~v~~~~~--~~l~~~YR~s~~~ 157 (268)
T 2gqt_A 87 LVQEAARAG--L---SGLEGLLGIPA-QVGGAVKMNAGTRFGEMADALEAVEVF-HDGAFHVYCP--EELGFGYRKSHLP 157 (268)
T ss_dssp HHHHHHHTT--E---ESCGGGTTCCC-BHHHHHHTTCEETTEEGGGGEEEEEEE-ETTEEEEECG--GGSCCBTTBCCCS
T ss_pred HHHHHHHcC--C---cCCccccCccc-hhHHHHHhccccCchhHHhheeEEEEE-CCCcEEEEch--HHcccccCCCCcC
Confidence 999999998 5 58889999999 89999999999999 799999999999 9999998443 6899999988432
Q ss_pred CeEEEEEEEEEEEeeC
Q 040771 230 SFGVILAWKIKLVAVP 245 (496)
Q Consensus 230 ~~GIVt~~t~~l~p~~ 245 (496)
.-||||+++||++|.+
T Consensus 158 ~~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 158 PGGIVTRVRLKLKERP 173 (268)
T ss_dssp TTCEEEEEEECCEECC
T ss_pred CCceEEEEEEEEEeCC
Confidence 1249999999999974
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.79 E-value=2.1e-19 Score=170.14 Aligned_cols=116 Identities=22% Similarity=0.294 Sum_probs=99.2
Q ss_pred eEEcCCCCEEEEeCCccHHHHHHHHHhcCCccccccCCCCccccccccccCCCCCCccccccccceeeEEEEEeeCCeEE
Q 040771 131 IDIDIANETAWVQAGATLGELYFKIANTSKVHAFPAGVCHSLGVGGHISGGGYGNLLRKYGISVDNVIDAQLVDVKGRIL 210 (496)
Q Consensus 131 i~id~~~~~v~v~aG~~~~~l~~~l~~~g~~l~~~~G~~~~vgvgG~~~ggg~g~~s~~~G~~~D~v~~~~vV~~~G~~v 210 (496)
|++|+++.+++||||+++.+|+++|.++|+.+...+|+++. +|||++.+|++| ..||.. |+|++++||++||+++
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~i~ 75 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGRRV 75 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTTEECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSCEE
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCCEE
Confidence 46899999999999999999999999999544333466666 999999999988 899999 9999999999999998
Q ss_pred e-cc-----CCCccchhhhccccCCCeEEEEEEEEEEEeeCceeEEEE
Q 040771 211 N-RE-----SMGEDLFWAIRGGGGASFGVILAWKIKLVAVPEKVTLFK 252 (496)
Q Consensus 211 ~-~~-----~~~~dLf~a~rG~g~g~~GIVt~~t~~l~p~~~~~~~~~ 252 (496)
+ .. ..++||||+++|+ +|+|||||+++||++|.++....+.
T Consensus 76 ~~~~~~~kn~~gydl~~~~~Gs-~G~lGIVt~~tlrl~p~~~~~~~~~ 122 (219)
T 2yvs_A 76 RAGGVVVKNVQGYDLVRLFVGS-FGLLGRAEEVVLRLRPGRAQAFLRR 122 (219)
T ss_dssp EEECSSCSSSSCSCHHHHHTTC-TTTTCEEEEEEEECEECSEEEEEEE
T ss_pred EECCccccCCCCcchHHHhccC-CCceEEEEEEEEEEEECCcccEEEE
Confidence 7 22 2358999999998 7899999999999999987654433
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.23 E-value=1.8e-06 Score=84.73 Aligned_cols=155 Identities=17% Similarity=0.143 Sum_probs=99.3
Q ss_pred CccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCC-CcccCCCeEEEEcCC---CCCeEEcCCCCEEEEeCCccH
Q 040771 73 KPLAILTAKHESHVQATVICAKQAGLELRIRSGGHDYDGL-SYISTVPFVILDMFN---LRSIDIDIANETAWVQAGATL 148 (496)
Q Consensus 73 ~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~-~~~~~~~g~vIdl~~---l~~i~id~~~~~v~v~aG~~~ 148 (496)
.|.-+++|+|.+|+.++++. ++.+..+.|||++.... .......+++||+++ |+.|+.+ +..+++|||+++
T Consensus 4 ~~~~~~~P~s~~ea~~ll~~---~~~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~i~~~--~~~l~iGA~~tl 78 (287)
T 1ffv_C 4 PRFEYHAPKSVGEAVALLGQ---LGSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREE--GSTVVIGAMTVE 78 (287)
T ss_dssp CCCEEECCSSHHHHHHHHHH---HGGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEE--TTEEEEETTCBH
T ss_pred CcceEECCCCHHHHHHHHHh---cCCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEec--CCEEEEccCCcH
Confidence 45568999999999999875 34679999999995421 001122479999984 6777764 347999999999
Q ss_pred HHHHHH-HHhcCCc-cc--cc-cCCC---CccccccccccCCCCCCccccccccceee-------EEEEEeeCCeEEecc
Q 040771 149 GELYFK-IANTSKV-HA--FP-AGVC---HSLGVGGHISGGGYGNLLRKYGISVDNVI-------DAQLVDVKGRILNRE 213 (496)
Q Consensus 149 ~~l~~~-l~~~g~~-l~--~~-~G~~---~~vgvgG~~~ggg~g~~s~~~G~~~D~v~-------~~~vV~~~G~~v~~~ 213 (496)
.++.+. +.+++.. |. +. .++. +..+|||.+..+.. .+|.+. .+++..++|. .+..
T Consensus 79 ~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~---------~~D~~~~l~Al~A~v~~~~~~G~-r~i~ 148 (287)
T 1ffv_C 79 NDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP---------GNDHPALSIAVEAHFVLEGPNGR-RTVP 148 (287)
T ss_dssp HHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT---------TCSHHHHHHHTTCEEEEEETTEE-EEEE
T ss_pred HHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC---------cHHHHHHHHHcCcEEEEEcCCce-EEEE
Confidence 999962 3333211 11 00 1111 13567887776531 345443 5888889993 3322
Q ss_pred CCCccchhhhccccCCCeEEEEEEEEEEEee
Q 040771 214 SMGEDLFWAIRGGGGASFGVILAWKIKLVAV 244 (496)
Q Consensus 214 ~~~~dLf~a~rG~g~g~~GIVt~~t~~l~p~ 244 (496)
. .|+|+.+|-.....=-|||+++|.+.+.
T Consensus 149 ~--~df~~g~~~t~l~~~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 149 A--DGFFLGTYMTLLEENEVMVEIRVPAFAQ 177 (287)
T ss_dssp S--TTTEEETTEESCCTTCEEEEEEEECCCT
T ss_pred H--HHHhcCcccccCCCCCEEEEEEecCCCC
Confidence 2 5888888743222225999999876653
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.59 E-value=9.2e-05 Score=72.59 Aligned_cols=154 Identities=16% Similarity=0.075 Sum_probs=94.0
Q ss_pred CccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCC-CcccCCCeEEEEcCC---CCCeEEcCCCCEEEEeCCccH
Q 040771 73 KPLAILTAKHESHVQATVICAKQAGLELRIRSGGHDYDGL-SYISTVPFVILDMFN---LRSIDIDIANETAWVQAGATL 148 (496)
Q Consensus 73 ~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~-~~~~~~~g~vIdl~~---l~~i~id~~~~~v~v~aG~~~ 148 (496)
.|.-+++|+|.+|+.++++. ++-+..+.+|||+.... -........+||+++ |+.|+.+ ++.+++||++++
T Consensus 4 ~~~~~~~P~sl~ea~~ll~~---~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~~t~ 78 (288)
T 1n62_C 4 GSFDYHRPKSIADAVALLTK---LGEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREE--GTDVVIGAMTTQ 78 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHH---HGGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEEE--TTEEEEETTCBH
T ss_pred CceEEECcCCHHHHHHHHHh---cCCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEec--CCEEEEccCCcH
Confidence 45568999999999998863 34568999999995321 001122479999986 5666653 457999999999
Q ss_pred HHHHH--HHHhcCCccc--cc-cCC---CCccccccccccCCCCCCccccccccceee-------EEEEEeeCCeEEecc
Q 040771 149 GELYF--KIANTSKVHA--FP-AGV---CHSLGVGGHISGGGYGNLLRKYGISVDNVI-------DAQLVDVKGRILNRE 213 (496)
Q Consensus 149 ~~l~~--~l~~~g~~l~--~~-~G~---~~~vgvgG~~~ggg~g~~s~~~G~~~D~v~-------~~~vV~~~G~~v~~~ 213 (496)
.++.+ .+.+.-..|. +. .++ -+..+|||.+..+. ..+|.+. .+++..++|+ .+..
T Consensus 79 ~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G~-r~v~ 148 (288)
T 1n62_C 79 HALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEGA-RIVA 148 (288)
T ss_dssp HHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTEE-EEEE
T ss_pred HHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCcc-EEEE
Confidence 99984 4443211111 00 111 11347888877662 2355543 5667778884 3222
Q ss_pred CCCccchhhhccccCCCeEEEEEEEEEEEe
Q 040771 214 SMGEDLFWAIRGGGGASFGVILAWKIKLVA 243 (496)
Q Consensus 214 ~~~~dLf~a~rG~g~g~~GIVt~~t~~l~p 243 (496)
- .|+|..++-.....=-|||+++|...+
T Consensus 149 ~--~df~~g~~~t~l~~~eil~~i~ip~~~ 176 (288)
T 1n62_C 149 A--RDYYQGAYFTAIEPGELLTAIRIPVPP 176 (288)
T ss_dssp H--HHHEEETTEESCCTTCEEEEEEEECCC
T ss_pred H--HHHhcCcccccCCCCCEEEEEEeCCCC
Confidence 2 467766652212222589999886554
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=97.26 E-value=0.00022 Score=74.40 Aligned_cols=152 Identities=15% Similarity=0.082 Sum_probs=97.3
Q ss_pred EEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCCc-ccCCCeEEEEcCC---CCCeEEcCCCCEEEEeCCccHHHH
Q 040771 76 AILTAKHESHVQATVICAKQAGLELRIRSGGHDYDGLSY-ISTVPFVILDMFN---LRSIDIDIANETAWVQAGATLGEL 151 (496)
Q Consensus 76 ~vv~P~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~-~~~~~g~vIdl~~---l~~i~id~~~~~v~v~aG~~~~~l 151 (496)
.+++|+|.+|+.++++.. . +..+.+||++....-- .....+++||+++ |+.|+.+ +..+++|||+++.++
T Consensus 179 ~y~~P~sl~ea~~ll~~~---~-~a~ilaGGT~L~~~~k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vtl~~l 252 (462)
T 2w3s_A 179 PAFLPETSDALADWYLAH---P-EATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRET--PDGYGIGAGVTIAAL 252 (462)
T ss_dssp CCBCCSSHHHHHHHHHHC---T-TCEEESSCTTTTHHHHTSCCCCCSEEECTTCGGGSCEEEE--TTEEEEETTCBHHHH
T ss_pred EEEecCCHHHHHHHHhhC---C-CCEEEeCCchhhhhhhccCCCCCEEEEcCCChhhCcEEEc--CCEEEEccCCcHHHH
Confidence 468999999999987642 2 5788999999763200 1112478999988 6777765 346999999999999
Q ss_pred HHHHHhcCCccc---cccCCC----CccccccccccCCCCCCccccccccceee----EEEEEeeCCeEEeccCCCccch
Q 040771 152 YFKIANTSKVHA---FPAGVC----HSLGVGGHISGGGYGNLLRKYGISVDNVI----DAQLVDVKGRILNRESMGEDLF 220 (496)
Q Consensus 152 ~~~l~~~g~~l~---~~~G~~----~~vgvgG~~~ggg~g~~s~~~G~~~D~v~----~~~vV~~~G~~v~~~~~~~dLf 220 (496)
.+.+.+ .+..- +..... +..+|||.+..+.++ +-...-++ .+++..++|+ .+..- .|+|
T Consensus 253 ~~~l~~-~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp~------sD~~~~L~ALdA~v~l~~~~G~-R~vp~--~dF~ 322 (462)
T 2w3s_A 253 RAFAEG-PHPALAGLLRRFASEQVRQVATIGGNIANGSPI------GDGPPALIAMGASLTLRRGQER-RRMPL--EDFF 322 (462)
T ss_dssp HHHHTT-TCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCTT------CSHHHHHHHTTCEEEEEBTTBC-CCCBG--GGGE
T ss_pred HHHHHH-HhHHHHHHHHHhCChhheeeEEcccccccCCCc------chHHHHHHHcCCEEEEEeCCce-EEEEH--HHhh
Confidence 987433 22110 011111 235788888876532 55555566 7788888883 22222 5788
Q ss_pred hhhccccCCCeEEEEEEEEEEEe
Q 040771 221 WAIRGGGGASFGVILAWKIKLVA 243 (496)
Q Consensus 221 ~a~rG~g~g~~GIVt~~t~~l~p 243 (496)
..+|-.....=-||++++|...+
T Consensus 323 ~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 323 LEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp EETTEESCCTTCEEEEEEEESCC
T ss_pred cccccccCCCCcEEEEEEEecCC
Confidence 87763212122599999886544
No 32
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=96.38 E-value=0.0037 Score=61.03 Aligned_cols=152 Identities=14% Similarity=0.072 Sum_probs=89.6
Q ss_pred CCccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCC-cccCCCeEEEEcCCC---CCeEEcCCCCEEEEeCCcc
Q 040771 72 PKPLAILTAKHESHVQATVICAKQAGLELRIRSGGHDYDGLS-YISTVPFVILDMFNL---RSIDIDIANETAWVQAGAT 147 (496)
Q Consensus 72 ~~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~-~~~~~~g~vIdl~~l---~~i~id~~~~~v~v~aG~~ 147 (496)
+.|.-+++|+|.+|+.++++. +-...+.+|||+....- ........+||++++ +.|+. +++.+++||+++
T Consensus 3 ~~~f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt 76 (288)
T 1t3q_C 3 FPAFSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQ--SAGILSVGAMVT 76 (288)
T ss_dssp CCCCEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEE--ETTEEEEETTCB
T ss_pred CCCceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHHhcCCCCCCEEEECCCChhhcCeEE--cCCEEEEcCCCc
Confidence 345578999999999998763 23467889999943110 011123689999985 45655 445899999999
Q ss_pred HHHHHH--HHHhcCCccc-----cc-cCCCCccccccccccCCCCCCccccccccceee-------EEEEEeeCCeEEec
Q 040771 148 LGELYF--KIANTSKVHA-----FP-AGVCHSLGVGGHISGGGYGNLLRKYGISVDNVI-------DAQLVDVKGRILNR 212 (496)
Q Consensus 148 ~~~l~~--~l~~~g~~l~-----~~-~G~~~~vgvgG~~~ggg~g~~s~~~G~~~D~v~-------~~~vV~~~G~~v~~ 212 (496)
+.++.+ .+.++-..|. +. ...-+..+|||.+..+- ..+|... .+++..++|+...
T Consensus 77 ~~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~---------p~sD~~~~L~Al~A~v~l~~~~g~R~v- 146 (288)
T 1t3q_C 77 HFRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHAD---------AGAEMPFLMATLGATMYIASSAGVRSV- 146 (288)
T ss_dssp HHHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTC---------TTCHHHHHHHHTTCEEEEEETTEEEEE-
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCC---------CcHHHHHHHHHcCcEEEEEcCCceEEE-
Confidence 999986 4433211111 10 01113346788776542 1356554 6677777885322
Q ss_pred cCCCccchhhhccccCCCeEEEEEEEEEE
Q 040771 213 ESMGEDLFWAIRGGGGASFGVILAWKIKL 241 (496)
Q Consensus 213 ~~~~~dLf~a~rG~g~g~~GIVt~~t~~l 241 (496)
.- .|+|...+--....=-|||++.|..
T Consensus 147 p~--~dF~~g~~~t~L~~~Eil~~I~iP~ 173 (288)
T 1t3q_C 147 SA--TDFMKGHYFTDLEAGEVLVRVEIPI 173 (288)
T ss_dssp EH--HHHEEETTEESCCTTCEEEEEEEEC
T ss_pred EH--HHHhcCcccccCCCCCEEEEEEecC
Confidence 11 4666544321111225899888754
No 33
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=96.24 E-value=0.0071 Score=59.52 Aligned_cols=156 Identities=11% Similarity=0.016 Sum_probs=89.3
Q ss_pred CccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCC-cccCCCeEEEEcCCCC---CeEEcCCCCEEEEeCCccH
Q 040771 73 KPLAILTAKHESHVQATVICAKQAGLELRIRSGGHDYDGLS-YISTVPFVILDMFNLR---SIDIDIANETAWVQAGATL 148 (496)
Q Consensus 73 ~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~-~~~~~~g~vIdl~~l~---~i~id~~~~~v~v~aG~~~ 148 (496)
.+..+++|+|.+|+.++++. +. ...+.+||++....- ........+||++++. .|+. +++.+++||++++
T Consensus 9 ~~~~y~~P~sl~ea~~ll~~---~~-~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt~ 82 (305)
T 3nvz_B 9 ERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEH--GPEGISFGAACAL 82 (305)
T ss_dssp SSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEE--CSSEEEEETTCBH
T ss_pred CCeEEEccCCHHHHHHHHHh---CC-CCEEEECccHHHHHHhcCCCCCCEEEECCCChhhcceEE--CCCeEEEccCCcH
Confidence 45678999999999887643 22 357889999964210 0011236899999754 5554 4568999999999
Q ss_pred HHHHHHHHhc----C----C---ccc--ccc-C---CCCccccccccccCCCCCCccccccccceee----EEEEEeeCC
Q 040771 149 GELYFKIANT----S----K---VHA--FPA-G---VCHSLGVGGHISGGGYGNLLRKYGISVDNVI----DAQLVDVKG 207 (496)
Q Consensus 149 ~~l~~~l~~~----g----~---~l~--~~~-G---~~~~vgvgG~~~ggg~g~~s~~~G~~~D~v~----~~~vV~~~G 207 (496)
.++.+.+.++ . . .|. +.. + .-+..+|||.+..+... +-..--++ .+++..++|
T Consensus 83 ~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p~------sD~~~~L~AldA~v~l~~~~G 156 (305)
T 3nvz_B 83 SSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPI------SDLNPVFMASGTKLTIVSRGT 156 (305)
T ss_dssp HHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCTT------CSSHHHHHHHTCEEEEEETTE
T ss_pred HHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCCc------hHHHHHHHHcCCEEEEEcCCC
Confidence 9998876531 0 0 010 000 1 11245788877765421 22221222 566777788
Q ss_pred eEEeccCCCccchhhhccccCCCeEEEEEEEEEEE
Q 040771 208 RILNRESMGEDLFWAIRGGGGASFGVILAWKIKLV 242 (496)
Q Consensus 208 ~~v~~~~~~~dLf~a~rG~g~g~~GIVt~~t~~l~ 242 (496)
+.... - ..|+|-+++--....=-|||++.+...
T Consensus 157 ~R~vp-~-~~df~~g~~~t~l~~~Eil~~I~iP~~ 189 (305)
T 3nvz_B 157 RRTVP-M-DHTFFPSYRKTLLGPEEILLSIEIPYS 189 (305)
T ss_dssp EEEEE-C-CGGGCCSTTCCSCCTTCEEEEEEEECC
T ss_pred cEEEE-e-ehHhhcCcccccCCCCcEEEEEEecCC
Confidence 53222 1 126666554221111149999887543
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=93.42 E-value=0.085 Score=51.53 Aligned_cols=75 Identities=19% Similarity=0.152 Sum_probs=52.6
Q ss_pred ccEEEEcCCHHHHHHHHHHHHHcCC-cEEEEcCCCCCCCC-CcccCCCeEEEEcCCCC---CeEEcCCCCEEEEeCCccH
Q 040771 74 PLAILTAKHESHVQATVICAKQAGL-ELRIRSGGHDYDGL-SYISTVPFVILDMFNLR---SIDIDIANETAWVQAGATL 148 (496)
Q Consensus 74 p~~vv~P~s~~dv~~~v~~a~~~~~-~~~~~ggGh~~~g~-~~~~~~~g~vIdl~~l~---~i~id~~~~~v~v~aG~~~ 148 (496)
|.-+++|+|.+|..++++ +++- ...+.+||++.... -........+||++++. .|+. +++.+++||++++
T Consensus 3 ~f~y~~P~sl~ea~~ll~---~~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt~ 77 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLH---QYKDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRV--EENTIHIGALSTF 77 (296)
T ss_dssp CCEEECCSSHHHHHHHHH---HTTTSCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEE--CSSEEEEETTCBH
T ss_pred ceeEeCCCCHHHHHHHHH---hCCCCCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEE--cCCeEEEccCCcH
Confidence 446899999999887764 3433 46788999996421 00111246899999864 4554 4568999999999
Q ss_pred HHHHH
Q 040771 149 GELYF 153 (496)
Q Consensus 149 ~~l~~ 153 (496)
.++.+
T Consensus 78 ~~l~~ 82 (296)
T 3hrd_C 78 TQIEN 82 (296)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99974
No 35
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=89.16 E-value=0.38 Score=47.43 Aligned_cols=76 Identities=13% Similarity=0.043 Sum_probs=53.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCC-CcccCCCeEEEEcCCC---CCeEEcCCCCEEEEeCCccH
Q 040771 73 KPLAILTAKHESHVQATVICAKQAGLELRIRSGGHDYDGL-SYISTVPFVILDMFNL---RSIDIDIANETAWVQAGATL 148 (496)
Q Consensus 73 ~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~-~~~~~~~g~vIdl~~l---~~i~id~~~~~v~v~aG~~~ 148 (496)
.|.-+++|+|.+|..++++ + -.-.+.+||+++... -........+||++++ +.|+.+++ +.+++||++++
T Consensus 5 ~~f~y~~P~sl~ea~~ll~---~--~~a~~lAGGT~l~~~~k~~~~~p~~lIdi~~i~eL~~I~~~~~-~~l~IGA~vt~ 78 (324)
T 1rm6_B 5 TDFRTHRPATLADAVNALA---A--EATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLAD-GSLRIGAGATL 78 (324)
T ss_dssp CCCEEECCSSHHHHHHHTT---S--TTEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECTT-SCEEEETTCBH
T ss_pred CceEEEccCCHHHHHHHHh---C--CCCEEEECchhHHHHHhccCCCCCEEEECCCChhhcceEECCC-CeEEEccCCcH
Confidence 4456899999999998876 1 247888999986311 0011223689999876 55665433 46999999999
Q ss_pred HHHHHH
Q 040771 149 GELYFK 154 (496)
Q Consensus 149 ~~l~~~ 154 (496)
.++.+.
T Consensus 79 ~~l~~~ 84 (324)
T 1rm6_B 79 EAIAEH 84 (324)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 998763
No 36
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=89.10 E-value=0.14 Score=54.24 Aligned_cols=37 Identities=24% Similarity=0.397 Sum_probs=30.3
Q ss_pred hhhcccccCCcHHHHHHHHhccCCCCCCCCCCCCCCCC
Q 040771 457 EVYGTKYFNGNFKKLVEVKTRFDPDNFFKNEQSIPPGN 494 (496)
Q Consensus 457 ~~~g~~yyg~n~~RL~~vK~kYDP~nvF~~~~~I~~~~ 494 (496)
..|+ ..||+.|++|++||++|||+|+|+-.+-|-+..
T Consensus 487 ~~w~-~~~G~~~~~m~~iK~~~DP~~iLnPG~~if~~~ 523 (524)
T 2exr_A 487 EEWI-RHFGNRWSRFVDRKAMFDPMAILSPGQKIFNRS 523 (524)
T ss_dssp HHHH-HHHGGGHHHHHHHHHHHCTTCCBCGGGCSSCCC
T ss_pred HHHH-HHhhhHHHHHHHHHhhcCchhhcCCCCccCCCC
Confidence 3575 466889999999999999999999888776543
No 37
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=74.89 E-value=2.2 Score=49.96 Aligned_cols=78 Identities=9% Similarity=0.018 Sum_probs=53.9
Q ss_pred CccEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCC-cccCCCeEEEEcCCCC---CeEEcCCCCEEEEeCCccH
Q 040771 73 KPLAILTAKHESHVQATVICAKQAGLELRIRSGGHDYDGLS-YISTVPFVILDMFNLR---SIDIDIANETAWVQAGATL 148 (496)
Q Consensus 73 ~p~~vv~P~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~-~~~~~~g~vIdl~~l~---~i~id~~~~~v~v~aG~~~ 148 (496)
.+..+++|+|.+|+.++++. + -.-.+.+||++..-.- ........+||++++. .|+.+ +..+++||++++
T Consensus 232 ~~~~~~~P~sl~ea~~ll~~---~-~~a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~--~~~l~IGA~vtl 305 (1332)
T 3unc_A 232 ERVTWIQASTLKELLDLKAQ---H-PEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHG--PEGISFGAACAL 305 (1332)
T ss_dssp SSCEEEECCSHHHHHHHHHH---C-TTCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEEC--SSEEEEETTCBH
T ss_pred CceEEEccCCHHHHHHHHhh---C-CCCEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEe--CCEEEEEecChH
Confidence 45578999999999887643 2 1246789998854210 0011235899999855 45553 557999999999
Q ss_pred HHHHHHHH
Q 040771 149 GELYFKIA 156 (496)
Q Consensus 149 ~~l~~~l~ 156 (496)
.++.+.+.
T Consensus 306 ~~l~~~l~ 313 (1332)
T 3unc_A 306 SSVEKTLL 313 (1332)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988764
No 38
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=70.79 E-value=2.1 Score=44.93 Aligned_cols=27 Identities=19% Similarity=0.283 Sum_probs=20.8
Q ss_pred ccccCC-cHHHHHHHHhccCCCCCCCCC
Q 040771 461 TKYFNG-NFKKLVEVKTRFDPDNFFKNE 487 (496)
Q Consensus 461 ~~yyg~-n~~RL~~vK~kYDP~nvF~~~ 487 (496)
..+|++ .++-+++||+.+||+|+|+-.
T Consensus 483 ~~~~g~~~~~lmr~IK~a~DP~~IlNPG 510 (520)
T 1wvf_A 483 AQSYGPVKRKLEHAIKRAVDPNNILAPG 510 (520)
T ss_dssp HHHTCHHHHHHHHHHHHHHCTTCCBCTT
T ss_pred hhhcCHHHHHHHHHHHHHcCCCCCCCCC
Confidence 445565 456669999999999999853
No 39
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=67.04 E-value=1.7 Score=47.13 Aligned_cols=28 Identities=32% Similarity=0.439 Sum_probs=21.9
Q ss_pred hcccccC-CcHHHHHHHHhccCCCCCCCC
Q 040771 459 YGTKYFN-GNFKKLVEVKTRFDPDNFFKN 486 (496)
Q Consensus 459 ~g~~yyg-~n~~RL~~vK~kYDP~nvF~~ 486 (496)
|-..+++ +.++.|++||+.|||+|+|+-
T Consensus 626 ~l~~~~g~~~l~lmr~IK~a~DP~gILNP 654 (658)
T 4bby_A 626 WLKESISDVGFGMLKSVKDYVDPTNIFGN 654 (658)
T ss_dssp GHHHHHCHHHHHHHHHHHHHHSTTCSSCS
T ss_pred HHHHhcCHHHHHHHHHHHHHhCcccCCCC
Confidence 3333444 579999999999999999964
No 40
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=57.70 E-value=6.3 Score=41.81 Aligned_cols=30 Identities=17% Similarity=0.073 Sum_probs=23.5
Q ss_pred CcHHHHHHHHhccCCCCCCCCCCCCCCCCCC
Q 040771 466 GNFKKLVEVKTRFDPDNFFKNEQSIPPGNLN 496 (496)
Q Consensus 466 ~n~~RL~~vK~kYDP~nvF~~~~~I~~~~~~ 496 (496)
+..+ |++||+.+||+|+|+-..-+.+..+|
T Consensus 537 ~~~~-m~~iK~~~DP~~ilNPGk~~t~~~~~ 566 (571)
T 1f0x_A 537 APET-LQKFYRENDPTNSMNPGIGKTSKRKN 566 (571)
T ss_dssp CCHH-HHHHHHHHCTTCCBSTTTTTCCCSSC
T ss_pred CHHH-HHHHHHHhCCCCCCCCCcCcCCcccc
Confidence 3344 99999999999999977777665543
No 41
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=51.26 E-value=6.8 Score=41.46 Aligned_cols=22 Identities=23% Similarity=0.397 Sum_probs=20.5
Q ss_pred CcHHHHHHHHhccCCCCCCCCC
Q 040771 466 GNFKKLVEVKTRFDPDNFFKNE 487 (496)
Q Consensus 466 ~n~~RL~~vK~kYDP~nvF~~~ 487 (496)
.++++.+++++++||+++|.+.
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~ 554 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNG 554 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCHHHHHHHHHhcCCCCccCCH
Confidence 7999999999999999999864
No 42
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=49.46 E-value=7.8 Score=40.95 Aligned_cols=23 Identities=13% Similarity=0.184 Sum_probs=19.7
Q ss_pred CCcHHHHHHHHhccCCCCCCCCC
Q 040771 465 NGNFKKLVEVKTRFDPDNFFKNE 487 (496)
Q Consensus 465 g~n~~RL~~vK~kYDP~nvF~~~ 487 (496)
++.++-+++||+.+||+|+|+-.
T Consensus 522 ~~~~~lm~~iK~~~DP~gILNPG 544 (560)
T 1e8g_A 522 SSFLRFNEVLKNAVDPNGIIAPG 544 (560)
T ss_dssp HHHHHHHHHHHHHHCTTCCBCTT
T ss_pred HHHHHHHHHHHHHcCccCCCCCC
Confidence 34688899999999999999754
No 43
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=47.24 E-value=21 Score=29.46 Aligned_cols=37 Identities=16% Similarity=0.232 Sum_probs=32.1
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHHHcCCcE-EEEcCCC
Q 040771 71 TPKPLAILTAKHESHVQATVICAKQAGLEL-RIRSGGH 107 (496)
Q Consensus 71 ~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~-~~~ggGh 107 (496)
...|..|+++.+++|+.++.+.|++.|+|. .++=.|+
T Consensus 52 ~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~ 89 (120)
T 1xty_A 52 QGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGK 89 (120)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCc
Confidence 478999999999999999999999999996 5555665
No 44
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=39.44 E-value=12 Score=38.64 Aligned_cols=22 Identities=18% Similarity=0.466 Sum_probs=20.1
Q ss_pred CcHHHHHHHHhccCCCCCCCCC
Q 040771 466 GNFKKLVEVKTRFDPDNFFKNE 487 (496)
Q Consensus 466 ~n~~RL~~vK~kYDP~nvF~~~ 487 (496)
.++++.++||+++||+++|.+.
T Consensus 452 P~~~~F~~lr~~~DP~g~F~n~ 473 (481)
T 4feh_A 452 PRVDEWISVRRKVDPLRVFASD 473 (481)
T ss_dssp TTHHHHHHHHHHHCTTCCBCCH
T ss_pred cCHHHHHHHHHhhCCccccCCH
Confidence 5899999999999999999864
No 45
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=36.81 E-value=25 Score=41.28 Aligned_cols=79 Identities=5% Similarity=0.034 Sum_probs=49.2
Q ss_pred cEEEEcCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCC-CcccCCCeEEEEcCCCCCe-EEcCCCCEEEEeCCccHHHHH
Q 040771 75 LAILTAKHESHVQATVICAKQAGLELRIRSGGHDYDGL-SYISTVPFVILDMFNLRSI-DIDIANETAWVQAGATLGELY 152 (496)
Q Consensus 75 ~~vv~P~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~-~~~~~~~g~vIdl~~l~~i-~id~~~~~v~v~aG~~~~~l~ 152 (496)
...++|.|.+|+.++... .-+.+ +..|++...-. -.....-.++|++.+.... .|..++..+++||++++.++.
T Consensus 241 ~~w~~P~tl~el~~l~~~--~p~a~--lvaGnT~~gl~~~~~~~~~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~~ 316 (1335)
T 3zyv_A 241 TTWIAPGTLNDLLELKMK--HPSAP--LVIGNTYLGLHMKFTDVSYPIIISPARILELFVVTNTKQGLTLGTGLSLTQVK 316 (1335)
T ss_dssp CEEEECSSHHHHHHHHHH--CTTSC--BCSSCTTHHHHHC--CCCCSEEECCTTCGGGSCEECCTTEEEEETTCBHHHHH
T ss_pred ceEecCCCHHHHHHHHHH--CCCCe--EEEecccceeeEeecCCCCCeEEEcCcchhHheEEecCCEEEEcccCcHHHHH
Confidence 357899999999887432 12333 44566553200 0011112588998865543 344455689999999999998
Q ss_pred HHHHh
Q 040771 153 FKIAN 157 (496)
Q Consensus 153 ~~l~~ 157 (496)
+.|.+
T Consensus 317 ~~l~~ 321 (1335)
T 3zyv_A 317 NVLSD 321 (1335)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87764
No 46
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=36.27 E-value=56 Score=26.86 Aligned_cols=38 Identities=18% Similarity=0.201 Sum_probs=32.4
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHHHcCCcE-EEEcCCCC
Q 040771 71 TPKPLAILTAKHESHVQATVICAKQAGLEL-RIRSGGHD 108 (496)
Q Consensus 71 ~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~-~~~ggGh~ 108 (496)
...|..|+++.+++++.++.+.|++.|+|. .++=.|+.
T Consensus 53 ~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 91 (121)
T 1wn2_A 53 EGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGLT 91 (121)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTCT
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 478999999999999999999999999986 55566663
No 47
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=35.96 E-value=15 Score=38.54 Aligned_cols=23 Identities=17% Similarity=0.395 Sum_probs=21.0
Q ss_pred CCcHHHHHHHHhccCCCCCCCCC
Q 040771 465 NGNFKKLVEVKTRFDPDNFFKNE 487 (496)
Q Consensus 465 g~n~~RL~~vK~kYDP~nvF~~~ 487 (496)
++|++.-+++++++||+++|.+.
T Consensus 511 ~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 511 AANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp GGSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCCHHHHHHHHHhcCCCcccCCH
Confidence 58999999999999999999863
No 48
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=34.32 E-value=12 Score=38.77 Aligned_cols=29 Identities=10% Similarity=0.135 Sum_probs=22.6
Q ss_pred hhcccccC-CcHHHHHHHHhccCCCCCCCC
Q 040771 458 VYGTKYFN-GNFKKLVEVKTRFDPDNFFKN 486 (496)
Q Consensus 458 ~~g~~yyg-~n~~RL~~vK~kYDP~nvF~~ 486 (496)
.|-...++ +.++-+++||+.+||+|+++-
T Consensus 443 ~~l~~~~~~~~~~~m~~iK~~~DP~~ilNP 472 (476)
T 3pm9_A 443 DELAEVKDKTAIELMRSIKALLDPHGIMNP 472 (476)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHCTTSCBST
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCCC
Confidence 34434444 579999999999999999873
No 49
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=33.80 E-value=58 Score=26.53 Aligned_cols=38 Identities=8% Similarity=0.089 Sum_probs=32.2
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHHHcCCcE-EEEcCCCC
Q 040771 71 TPKPLAILTAKHESHVQATVICAKQAGLEL-RIRSGGHD 108 (496)
Q Consensus 71 ~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~-~~~ggGh~ 108 (496)
...|..|+++.+++++.++.+.|++.|+|. .++-.|+.
T Consensus 49 ~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~T 87 (117)
T 1rlk_A 49 EGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 87 (117)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 478999999999999999999999999986 55555553
No 50
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=33.31 E-value=57 Score=26.50 Aligned_cols=37 Identities=22% Similarity=0.300 Sum_probs=30.7
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHHHcCCcE-EEEcCCC
Q 040771 71 TPKPLAILTAKHESHVQATVICAKQAGLEL-RIRSGGH 107 (496)
Q Consensus 71 ~~~p~~vv~P~s~~dv~~~v~~a~~~~~~~-~~~ggGh 107 (496)
...|..|+++.+++|+.++.+.|++.|+|. .++-.|+
T Consensus 47 ~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 84 (115)
T 2zv3_A 47 EGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGH 84 (115)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC-
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 478999999999999999999999999985 4444554
No 51
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=31.05 E-value=68 Score=26.48 Aligned_cols=37 Identities=16% Similarity=0.154 Sum_probs=31.9
Q ss_pred CCccEEEEcCCHHHHHHHHHHHHHcCCcE-EEEcCCCC
Q 040771 72 PKPLAILTAKHESHVQATVICAKQAGLEL-RIRSGGHD 108 (496)
Q Consensus 72 ~~p~~vv~P~s~~dv~~~v~~a~~~~~~~-~~~ggGh~ 108 (496)
..+..|+++.+++|+.++.+.|++.|+|. .|+-.|+.
T Consensus 47 G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 47 GQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp CSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred CCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 67899999999999999999999999986 55566654
No 52
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=27.03 E-value=91 Score=25.32 Aligned_cols=36 Identities=28% Similarity=0.409 Sum_probs=30.5
Q ss_pred CCccEEEEcCCHHHHHHHHHHHHHcCCcE-EEEcCCC
Q 040771 72 PKPLAILTAKHESHVQATVICAKQAGLEL-RIRSGGH 107 (496)
Q Consensus 72 ~~p~~vv~P~s~~dv~~~v~~a~~~~~~~-~~~ggGh 107 (496)
..|..+++..+++++.++.+.|++.|+|. .++=.|+
T Consensus 50 g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 86 (117)
T 1q7s_A 50 GQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGR 86 (117)
T ss_dssp TCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred CCeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 56999999999999999999999999985 4555554
No 53
>3fbi_A Mediator of RNA polymerase II transcription subunit 7; proline-rich stretches, right-handed four-helix bundle, protein-protein complex; 2.80A {Saccharomyces cerevisiae} PDB: 3fbn_A
Probab=26.13 E-value=19 Score=27.70 Aligned_cols=18 Identities=22% Similarity=0.294 Sum_probs=15.3
Q ss_pred ccccCCcHHHHHHHHhcc
Q 040771 461 TKYFNGNFKKLVEVKTRF 478 (496)
Q Consensus 461 ~~yyg~n~~RL~~vK~kY 478 (496)
+.|-.+|++||.++|+++
T Consensus 22 K~FT~eNl~kl~e~k~~~ 39 (84)
T 3fbi_A 22 KFFTQSNLEKLPKYKEKK 39 (84)
T ss_dssp GGCCHHHHHHHHHHHHHH
T ss_pred hhcCHHHHHHHHHHHHHh
Confidence 346679999999999887
No 54
>2gvs_A Chemosensory protein CSP-SG4; alpha-coil, lipid binding protein; NMR {Schistocerca gregaria}
Probab=25.60 E-value=25 Score=28.53 Aligned_cols=14 Identities=29% Similarity=0.847 Sum_probs=12.0
Q ss_pred HHHHhccCCCCCCC
Q 040771 472 VEVKTRFDPDNFFK 485 (496)
Q Consensus 472 ~~vK~kYDP~nvF~ 485 (496)
.+|++||||++.+.
T Consensus 84 ~~L~~KyDP~g~y~ 97 (109)
T 2gvs_A 84 AQLKAKYDPDGTYS 97 (109)
T ss_dssp HHHHHHHCTTCTTT
T ss_pred HHHHHHHCCCchHH
Confidence 56789999999886
No 55
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=23.68 E-value=29 Score=36.73 Aligned_cols=22 Identities=18% Similarity=0.341 Sum_probs=19.4
Q ss_pred CCcHHHHHHHHhccCCCCCCCC
Q 040771 465 NGNFKKLVEVKTRFDPDNFFKN 486 (496)
Q Consensus 465 g~n~~RL~~vK~kYDP~nvF~~ 486 (496)
++.++-+++||+.+||+|+|+-
T Consensus 559 ~~~~~lmr~iK~a~DP~gIlNP 580 (584)
T 2uuu_A 559 RGWINVYRSLKETIDPKDICNP 580 (584)
T ss_dssp CTHHHHHHHHHHHHCTTCCBSC
T ss_pred HHHHHHHHHHHHHcCCCcCCCC
Confidence 4578999999999999999874
No 56
>1k19_A Chemosensory protein CSP2; pheromone, lipid transport; NMR {Mamestra brassicae} SCOP: a.118.21.1 PDB: 1kx8_A 1kx9_A 1n8u_A* 1n8v_A* 2jnt_A
Probab=23.25 E-value=28 Score=28.32 Aligned_cols=14 Identities=21% Similarity=0.662 Sum_probs=11.5
Q ss_pred HHHHhccCCCCCCC
Q 040771 472 VEVKTRFDPDNFFK 485 (496)
Q Consensus 472 ~~vK~kYDP~nvF~ 485 (496)
.+|.+||||++.++
T Consensus 82 ~~L~~KyDP~g~y~ 95 (112)
T 1k19_A 82 RELTAKYDPTGNWR 95 (112)
T ss_dssp HHHHHSSTTTCSSH
T ss_pred HHHHHHHCCCchHH
Confidence 45689999999875
No 57
>2ohw_A YUEI protein; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; 1.40A {Bacillus subtilis} SCOP: d.79.8.1
Probab=21.42 E-value=1.3e+02 Score=25.11 Aligned_cols=34 Identities=12% Similarity=0.133 Sum_probs=26.1
Q ss_pred cEEEEcC-CHHHHHHHHHHHHHcCCcEEEEcCCCC
Q 040771 75 LAILTAK-HESHVQATVICAKQAGLELRIRSGGHD 108 (496)
Q Consensus 75 ~~vv~P~-s~~dv~~~v~~a~~~~~~~~~~ggGh~ 108 (496)
...+.+. +.+.+...++.|+++|+|++++..-|.
T Consensus 66 ~l~ing~l~~~~~~~YiklA~~~~i~fTiV~~~~~ 100 (133)
T 2ohw_A 66 TLLINGELQYQSYSSYIQMASRYGVPFKIVSDLQF 100 (133)
T ss_dssp EEEEETTSCHHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred EEEEcCCCCHHHHHHHHHHHHHcCCCeEEecCCCC
Confidence 3455554 456788899999999999999988443
Done!