Query 040774
Match_columns 1035
No_of_seqs 517 out of 4477
Neff 10.2
Searched_HMMs 13730
Date Mon Mar 25 18:58:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040774.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/040774hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2omza2 c.10.2.1 (A:33-416) In 99.8 2.9E-17 2.1E-21 182.7 29.1 102 259-365 42-143 (384)
2 d2omza2 c.10.2.1 (A:33-416) In 99.8 7.8E-17 5.7E-21 179.1 28.3 170 213-403 44-233 (384)
3 d1xkua_ c.10.2.7 (A:) Decorin 99.7 5.5E-16 4E-20 165.7 25.3 152 236-404 11-165 (305)
4 d1p9ag_ c.10.2.7 (G:) von Will 99.7 1.4E-16 9.9E-21 166.2 18.5 179 214-408 11-191 (266)
5 d2a5yb3 c.37.1.20 (B:109-385) 99.7 4.1E-18 3E-22 177.4 5.8 111 1-120 165-277 (277)
6 d1p9ag_ c.10.2.7 (G:) von Will 99.7 4.6E-16 3.4E-20 162.1 17.6 195 236-490 11-206 (266)
7 d1xkua_ c.10.2.7 (A:) Decorin 99.7 6.5E-15 4.7E-19 157.2 26.4 173 213-404 31-210 (305)
8 d1ogqa_ c.10.2.8 (A:) Polygala 99.6 4.1E-16 3E-20 167.4 14.4 109 258-367 73-187 (313)
9 d1jl5a_ c.10.2.6 (A:) Leucine 99.6 2E-14 1.5E-18 157.2 25.5 74 261-340 58-131 (353)
10 d1ozna_ c.10.2.7 (A:) Reticulo 99.6 5.6E-15 4.1E-19 155.7 19.0 143 221-367 19-166 (284)
11 d1ozna_ c.10.2.7 (A:) Reticulo 99.6 7.6E-15 5.5E-19 154.7 19.4 187 207-407 23-219 (284)
12 d1ogqa_ c.10.2.8 (A:) Polygala 99.6 9.5E-16 6.9E-20 164.4 11.8 174 213-400 50-232 (313)
13 d1h6ta2 c.10.2.1 (A:31-240) In 99.6 1.1E-14 7.9E-19 145.2 18.3 164 213-398 46-209 (210)
14 d2omxa2 c.10.2.1 (A:37-235) In 99.6 1.3E-14 9.4E-19 143.4 18.0 160 213-394 40-199 (199)
15 d1jl5a_ c.10.2.6 (A:) Leucine 99.6 1.9E-13 1.4E-17 149.3 28.8 137 214-367 39-175 (353)
16 d2omxa2 c.10.2.1 (A:37-235) In 99.6 1E-14 7.4E-19 144.2 15.1 162 233-416 38-199 (199)
17 d1h6ua2 c.10.2.1 (A:36-262) In 99.5 2.5E-14 1.8E-18 145.0 14.1 104 258-366 60-163 (227)
18 d1h6ta2 c.10.2.1 (A:31-240) In 99.5 3.3E-14 2.4E-18 141.7 14.7 165 233-419 44-208 (210)
19 d1h6ua2 c.10.2.1 (A:36-262) In 99.5 4E-13 2.9E-17 135.9 19.9 185 213-419 41-225 (227)
20 d1a9na_ c.10.2.4 (A:) Spliceso 99.4 9.2E-14 6.7E-18 131.1 9.3 131 257-396 14-146 (162)
21 d1dcea3 c.10.2.2 (A:444-567) R 99.4 3.6E-13 2.6E-17 120.4 12.7 101 264-367 1-103 (124)
22 d1dcea3 c.10.2.2 (A:444-567) R 99.4 7.3E-13 5.3E-17 118.3 11.5 117 238-359 1-122 (124)
23 d1a9na_ c.10.2.4 (A:) Spliceso 99.3 4.5E-13 3.3E-17 126.3 6.4 128 229-361 12-146 (162)
24 d2astb2 c.10.1.3 (B:2136-2419) 99.3 3.2E-13 2.3E-17 141.4 5.9 90 628-726 45-134 (284)
25 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.3 1.1E-12 7.7E-17 128.5 8.2 106 261-367 29-139 (192)
26 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.3 3.4E-12 2.5E-16 124.8 11.6 125 264-402 11-139 (192)
27 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.3 8.3E-12 6.1E-16 127.6 14.9 99 218-319 13-116 (242)
28 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.3 1.2E-11 8.5E-16 126.5 15.3 103 238-346 11-119 (242)
29 d2astb2 c.10.1.3 (B:2136-2419) 99.3 1.8E-13 1.3E-17 143.3 1.4 139 843-993 93-235 (284)
30 d1m9la_ c.10.3.1 (A:) Outer ar 99.2 1.2E-12 8.5E-17 128.1 -0.4 141 250-395 38-180 (198)
31 d1m9la_ c.10.3.1 (A:) Outer ar 99.1 6E-12 4.3E-16 123.0 -0.9 127 262-401 24-152 (198)
32 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.9 3.1E-11 2.3E-15 136.6 -3.3 104 236-340 3-123 (460)
33 d2ifga3 c.10.2.7 (A:36-191) Hi 98.9 3.6E-09 2.6E-13 98.2 10.6 105 261-367 8-116 (156)
34 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.9 4.6E-11 3.4E-15 135.1 -3.4 105 262-367 3-125 (460)
35 d2ifga3 c.10.2.7 (A:36-191) Hi 98.8 1E-08 7.5E-13 95.0 10.6 83 258-340 28-114 (156)
36 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.5 2.2E-08 1.6E-12 107.5 3.5 179 213-401 31-255 (344)
37 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.2 2.5E-07 1.8E-11 99.0 4.6 180 213-402 93-315 (344)
38 d1koha1 c.10.2.3 (A:201-362) m 97.7 1.7E-06 1.3E-10 80.3 -1.3 42 258-299 62-106 (162)
39 d1koha1 c.10.2.3 (A:201-362) m 97.6 1.8E-06 1.3E-10 80.2 -1.8 62 279-340 60-126 (162)
40 d1pgva_ c.10.1.1 (A:) Tropomod 96.9 0.00086 6.2E-08 61.8 7.3 83 258-340 12-111 (167)
41 d1pgva_ c.10.1.1 (A:) Tropomod 96.5 0.0011 7.7E-08 61.1 5.4 104 235-339 15-141 (167)
42 d1io0a_ c.10.1.1 (A:) Tropomod 96.2 0.0025 1.8E-07 58.5 5.7 81 257-337 13-110 (166)
43 d1io0a_ c.10.1.1 (A:) Tropomod 95.3 0.0057 4.2E-07 56.0 4.2 84 257-340 42-143 (166)
44 d2fnaa2 c.37.1.20 (A:1-283) Ar 65.7 3 0.00022 40.3 5.5 58 12-73 201-259 (283)
45 d1v54e_ a.118.11.1 (E:) Cytoch 35.4 49 0.0036 25.3 6.4 61 23-83 21-86 (105)
No 1
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.77 E-value=2.9e-17 Score=182.73 Aligned_cols=102 Identities=25% Similarity=0.406 Sum_probs=64.0
Q ss_pred CCCCccEEEccCCcCccCcccccCCCCCcEEEcCCCCCCCcccccCCCCCcEEecccCcCCcchHhhccCCcCCEEcccC
Q 040774 259 GMPKLKVLDFTRMRLLSLPSSIHLLTDLRTLCLDSCQLEDIRVIGELRKLEILSLQASAIEQLPMEIGQLTQLKLLDLSN 338 (1035)
Q Consensus 259 ~~~~Lr~L~Ls~~~i~~lp~~i~~L~~Lr~L~L~~~~l~~l~~i~~L~~L~~L~L~~~~l~~lp~~i~~L~~L~~L~l~~ 338 (1035)
.+.+|++|+++++.|+.+ +.+..+++|++|++++|+++.++.++++++|++|++++|.+..++. ++.+++|+.|++++
T Consensus 42 ~l~~l~~L~l~~~~I~~l-~gl~~L~nL~~L~Ls~N~l~~l~~l~~L~~L~~L~L~~n~i~~i~~-l~~l~~L~~L~~~~ 119 (384)
T d2omza2 42 DLDQVTTLQADRLGIKSI-DGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFN 119 (384)
T ss_dssp HHTTCCEEECCSSCCCCC-TTGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCS
T ss_pred HhCCCCEEECCCCCCCCc-cccccCCCCCEEeCcCCcCCCCccccCCcccccccccccccccccc-cccccccccccccc
Confidence 345677777777777666 3566677777777777777766667777777777777776666553 66667777777666
Q ss_pred CccccccChhhhcCCCCCcEEEccCCc
Q 040774 339 CSKLKVIAPNVLSNLSQLEELYMANCS 365 (1035)
Q Consensus 339 ~~~l~~lp~~~l~~L~~L~~L~l~~~~ 365 (1035)
+. ...++. ......+..+....+.
T Consensus 120 ~~-~~~~~~--~~~~~~~~~~~~~~~~ 143 (384)
T d2omza2 120 NQ-ITDIDP--LKNLTNLNRLELSSNT 143 (384)
T ss_dssp SC-CCCCGG--GTTCTTCSEEEEEEEE
T ss_pred cc-cccccc--cccccccccccccccc
Confidence 55 444443 3344455555544443
No 2
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.75 E-value=7.8e-17 Score=179.14 Aligned_cols=170 Identities=22% Similarity=0.227 Sum_probs=113.4
Q ss_pred CCccEEEecCCCCCCCCCCCCCCCcceeeccCCCCCCCCCChhhhcCCCCccEEEccCCcCccCcccccCCCCCcEEEcC
Q 040774 213 KKCSRISLYDNNISEIPQGWECPQLEFFYNFAPNNSPLQIPDNIFIGMPKLKVLDFTRMRLLSLPSSIHLLTDLRTLCLD 292 (1035)
Q Consensus 213 ~~~~~l~l~~~~~~~l~~~~~~~~Lr~L~l~~~~~~~~~i~~~~f~~~~~Lr~L~Ls~~~i~~lp~~i~~L~~Lr~L~L~ 292 (1035)
..++++++.++.+..+...-.+++|++|++++ +....+++ |+++++|++|++++|.+..+++ ++.+++|++|+++
T Consensus 44 ~~l~~L~l~~~~I~~l~gl~~L~nL~~L~Ls~--N~l~~l~~--l~~L~~L~~L~L~~n~i~~i~~-l~~l~~L~~L~~~ 118 (384)
T d2omza2 44 DQVTTLQADRLGIKSIDGVEYLNNLTQINFSN--NQLTDITP--LKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLF 118 (384)
T ss_dssp TTCCEEECCSSCCCCCTTGGGCTTCCEEECCS--SCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECC
T ss_pred CCCCEEECCCCCCCCccccccCCCCCEEeCcC--CcCCCCcc--ccCCcccccccccccccccccc-ccccccccccccc
Confidence 46788888888888775444778888888887 56666764 6788888888888888887754 7788888888888
Q ss_pred CCCCCCcccccCCCCCcEEecccCcCCcchH--------------------hhccCCcCCEEcccCCccccccChhhhcC
Q 040774 293 SCQLEDIRVIGELRKLEILSLQASAIEQLPM--------------------EIGQLTQLKLLDLSNCSKLKVIAPNVLSN 352 (1035)
Q Consensus 293 ~~~l~~l~~i~~L~~L~~L~L~~~~l~~lp~--------------------~i~~L~~L~~L~l~~~~~l~~lp~~~l~~ 352 (1035)
++.++.+........+..+....+.+..+.. .+.............+. ...... ...
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~ 195 (384)
T d2omza2 119 NNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK--VSDISV-LAK 195 (384)
T ss_dssp SSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSC--CCCCGG-GGG
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccc--cccccc-ccc
Confidence 8887777556666666666665554432221 11222222222333322 122222 677
Q ss_pred CCCCcEEEccCCccceeeccccccccccCHHhhcCCCCCCEEEEeecCCCC
Q 040774 353 LSQLEELYMANCSIEWEVLGLSIERSNASLVELKNLSRLTTLEINILDAGI 403 (1035)
Q Consensus 353 L~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~~L~l~~~~~~~ 403 (1035)
+++++.++++++.+. .+......++|++|+++++....
T Consensus 196 l~~~~~l~l~~n~i~-------------~~~~~~~~~~L~~L~l~~n~l~~ 233 (384)
T d2omza2 196 LTNLESLIATNNQIS-------------DITPLGILTNLDELSLNGNQLKD 233 (384)
T ss_dssp CTTCSEEECCSSCCC-------------CCGGGGGCTTCCEEECCSSCCCC
T ss_pred ccccceeeccCCccC-------------CCCcccccCCCCEEECCCCCCCC
Confidence 889999999988775 22345667889999998876543
No 3
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.71 E-value=5.5e-16 Score=165.67 Aligned_cols=152 Identities=18% Similarity=0.288 Sum_probs=105.9
Q ss_pred CcceeeccCCCCCCCCCChhhhcCCCCccEEEccCCcCccCcc-cccCCCCCcEEEcCCCCCCCc--ccccCCCCCcEEe
Q 040774 236 QLEFFYNFAPNNSPLQIPDNIFIGMPKLKVLDFTRMRLLSLPS-SIHLLTDLRTLCLDSCQLEDI--RVIGELRKLEILS 312 (1035)
Q Consensus 236 ~Lr~L~l~~~~~~~~~i~~~~f~~~~~Lr~L~Ls~~~i~~lp~-~i~~L~~Lr~L~L~~~~l~~l--~~i~~L~~L~~L~ 312 (1035)
..++++..+ ....++|..+ .+.+++|++++|+++.+|+ +|.++++|++|++++|.+..+ ..|.++++|++|+
T Consensus 11 ~~~~~~C~~--~~L~~lP~~l---~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~ 85 (305)
T d1xkua_ 11 HLRVVQCSD--LGLEKVPKDL---PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 85 (305)
T ss_dssp ETTEEECTT--SCCCSCCCSC---CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred cCCEEEecC--CCCCccCCCC---CCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEec
Confidence 345555543 4566777765 3578888888888888875 678888888888888887766 5688888888888
Q ss_pred cccCcCCcchHhhccCCcCCEEcccCCccccccChhhhcCCCCCcEEEccCCccceeeccccccccccCHHhhcCCCCCC
Q 040774 313 LQASAIEQLPMEIGQLTQLKLLDLSNCSKLKVIAPNVLSNLSQLEELYMANCSIEWEVLGLSIERSNASLVELKNLSRLT 392 (1035)
Q Consensus 313 L~~~~l~~lp~~i~~L~~L~~L~l~~~~~l~~lp~~~l~~L~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~ 392 (1035)
+++|+++.+|..+ ...++.|++.++. +..++...+.....++.+....+... ........+..+++|+
T Consensus 86 l~~n~l~~l~~~~--~~~l~~L~~~~n~-l~~l~~~~~~~~~~~~~l~~~~n~~~---------~~~~~~~~~~~l~~L~ 153 (305)
T d1xkua_ 86 LSKNQLKELPEKM--PKTLQELRVHENE-ITKVRKSVFNGLNQMIVVELGTNPLK---------SSGIENGAFQGMKKLS 153 (305)
T ss_dssp CCSSCCSBCCSSC--CTTCCEEECCSSC-CCBBCHHHHTTCTTCCEEECCSSCCC---------GGGBCTTGGGGCTTCC
T ss_pred ccCCccCcCccch--hhhhhhhhccccc-hhhhhhhhhhcccccccccccccccc---------ccCCCccccccccccC
Confidence 8888888887643 3577888888776 77777766667777777777665433 0122334566677777
Q ss_pred EEEEeecCCCCC
Q 040774 393 TLEINILDAGIL 404 (1035)
Q Consensus 393 ~L~l~~~~~~~~ 404 (1035)
.+++..+....+
T Consensus 154 ~l~l~~n~l~~l 165 (305)
T d1xkua_ 154 YIRIADTNITTI 165 (305)
T ss_dssp EEECCSSCCCSC
T ss_pred ccccccCCcccc
Confidence 777766654433
No 4
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=1.4e-16 Score=166.23 Aligned_cols=179 Identities=23% Similarity=0.295 Sum_probs=154.0
Q ss_pred CccEEEecCCCCCCCCCCCCCCCcceeeccCCCCCCCCCChhhhcCCCCccEEEccCCcCccCcccccCCCCCcEEEcCC
Q 040774 214 KCSRISLYDNNISEIPQGWECPQLEFFYNFAPNNSPLQIPDNIFIGMPKLKVLDFTRMRLLSLPSSIHLLTDLRTLCLDS 293 (1035)
Q Consensus 214 ~~~~l~l~~~~~~~l~~~~~~~~Lr~L~l~~~~~~~~~i~~~~f~~~~~Lr~L~Ls~~~i~~lp~~i~~L~~Lr~L~L~~ 293 (1035)
....++-+++.++++|+.+. +++++|++++ +.+..++...|.++++|++|+|++|.++.+|. ++.+++|++|++++
T Consensus 11 ~~~~v~C~~~~L~~iP~~lp-~~l~~L~Ls~--N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~-~~~l~~L~~L~Ls~ 86 (266)
T d1p9ag_ 11 SHLEVNCDKRNLTALPPDLP-KDTTILHLSE--NLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-DGTLPVLGTLDLSH 86 (266)
T ss_dssp TCCEEECTTSCCSSCCSCCC-TTCCEEECTT--SCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-CSCCTTCCEEECCS
T ss_pred CCeEEEccCCCCCeeCcCcC-cCCCEEECcC--CcCCCcCHHHhhcccccccccccccccccccc-cccccccccccccc
Confidence 44557777888888987664 6899999997 77888998889999999999999999998874 67899999999999
Q ss_pred CCCCCc-ccccCCCCCcEEecccCcCCcchH-hhccCCcCCEEcccCCccccccChhhhcCCCCCcEEEccCCccceeec
Q 040774 294 CQLEDI-RVIGELRKLEILSLQASAIEQLPM-EIGQLTQLKLLDLSNCSKLKVIAPNVLSNLSQLEELYMANCSIEWEVL 371 (1035)
Q Consensus 294 ~~l~~l-~~i~~L~~L~~L~L~~~~l~~lp~-~i~~L~~L~~L~l~~~~~l~~lp~~~l~~L~~L~~L~l~~~~~~~~~~ 371 (1035)
|+++.+ ..+.++++|++|+++++.+..++. .+..+.++++|++++|. +..+|+..+..+++|++|++++|.+.
T Consensus 87 N~l~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~-l~~l~~~~~~~l~~l~~l~l~~N~l~---- 161 (266)
T d1p9ag_ 87 NQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNE-LKTLPPGLLTPTPKLEKLSLANNNLT---- 161 (266)
T ss_dssp SCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSC-CCCCCTTTTTTCTTCCEEECTTSCCS----
T ss_pred ccccccccccccccccccccccccccceeeccccccccccccccccccc-cceeccccccccccchhccccccccc----
Confidence 999876 788899999999999998887654 46889999999999997 88999887888999999999999987
Q ss_pred cccccccccCHHhhcCCCCCCEEEEeecCCCCCCCcc
Q 040774 372 GLSIERSNASLVELKNLSRLTTLEINILDAGILPSGF 408 (1035)
Q Consensus 372 ~~~~~~~~~~~~~l~~L~~L~~L~l~~~~~~~~~~~~ 408 (1035)
......+..+++|++|++++|.+..+|.++
T Consensus 162 -------~~~~~~~~~l~~L~~L~Ls~N~L~~lp~~~ 191 (266)
T d1p9ag_ 162 -------ELPAGLLNGLENLDTLLLQENSLYTIPKGF 191 (266)
T ss_dssp -------CCCTTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred -------ccCccccccccccceeecccCCCcccChhH
Confidence 344556888999999999999988887653
No 5
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=99.69 E-value=4.1e-18 Score=177.40 Aligned_cols=111 Identities=14% Similarity=0.154 Sum_probs=96.3
Q ss_pred CCHHHHhhcCC--eeEeCCCCCHHHHHHHHHHhhCCCCCChhhHHHHHHHHHHhCCchhHHHHHHHHHhcCCChhHHHHH
Q 040774 1 RDRHVLESIGS--KTIGIDVLSDEEAWTLFKKMAGDCAENGELKSIATDVAKECGRLPIAIVTLAKALRNKSIVSAWKEA 78 (1035)
Q Consensus 1 R~~~v~~~~~~--~~~~l~~L~~~~~~~Lf~~~a~~~~~~~~l~~~~~~i~~~c~glPla~~~~g~~L~~~~~~~~W~~~ 78 (1035)
|+++||..+.. ++|+|++|+.+|||+||+++|+.....+..++++++||++|+|+||||+++|+.|+.+ +.++|.+.
T Consensus 165 R~~~v~~~~~~~~~~~~l~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~iv~~c~GlPLAl~~ig~~l~~k-~~~~~~~~ 243 (277)
T d2a5yb3 165 RDVEISNAASQTCEFIEVTSLEIDECYDFLEAYGMPMPVGEKEEDVLNKTIELSSGNPATLMMFFKSCEPK-TFEKMAQL 243 (277)
T ss_dssp SBGGGGGGCCSCEEEEECCCCCHHHHHHHHHHTSCCCC--CHHHHHHHHHHHHHTTCHHHHHHHHTTCCSS-SHHHHHHH
T ss_pred ehHHHHHhcCCCCceEECCCCCHHHHHHHHHHHhCCccCchhhHHHHHHHHHHhCCCHHHHHHHHHHhccC-CHHHHHHH
Confidence 78999998766 7899999999999999999997656666778999999999999999999999999988 78899998
Q ss_pred HHHhcCCCCCCccchhhhhhHHHHHhhhccChhhhhHHHhcc
Q 040774 79 LRQLKKPSHWNFEGVLAKTYSAIELSYKYLREEELKQLFLQC 120 (1035)
Q Consensus 79 l~~l~~~~~~~~~~~~~~i~~~L~lSY~~Lp~~~lk~cFly~ 120 (1035)
.+.++... ..+|+.++++||++||++ ||+||-+.
T Consensus 244 ~~~L~~~~-------~~~v~~il~~sY~~L~~~-lk~c~~~l 277 (277)
T d2a5yb3 244 NNKLESRG-------LVGVECITPYSYKSLAMA-LQRCVEVL 277 (277)
T ss_dssp HHHHHHHC-------SSTTCCCSSSSSSSHHHH-HHHHHHTS
T ss_pred HHHHhcCc-------HHHHHHHHHHHHhcccHH-HHHHHHhC
Confidence 88775422 256889999999999999 99999763
No 6
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=4.6e-16 Score=162.10 Aligned_cols=195 Identities=23% Similarity=0.306 Sum_probs=152.4
Q ss_pred CcceeeccCCCCCCCCCChhhhcCCCCccEEEccCCcCccCc-ccccCCCCCcEEEcCCCCCCCcccccCCCCCcEEecc
Q 040774 236 QLEFFYNFAPNNSPLQIPDNIFIGMPKLKVLDFTRMRLLSLP-SSIHLLTDLRTLCLDSCQLEDIRVIGELRKLEILSLQ 314 (1035)
Q Consensus 236 ~Lr~L~l~~~~~~~~~i~~~~f~~~~~Lr~L~Ls~~~i~~lp-~~i~~L~~Lr~L~L~~~~l~~l~~i~~L~~L~~L~L~ 314 (1035)
.+...+..+ +...++|+.+ .+++++|+|++|.++.+| .+|.++++|++|+|++|.++.++.++.+++|++|+++
T Consensus 11 ~~~~v~C~~--~~L~~iP~~l---p~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~~~~l~~L~~L~Ls 85 (266)
T d1p9ag_ 11 SHLEVNCDK--RNLTALPPDL---PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLS 85 (266)
T ss_dssp TCCEEECTT--SCCSSCCSCC---CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECCSCCTTCCEEECC
T ss_pred CCeEEEccC--CCCCeeCcCc---CcCCCEEECcCCcCCCcCHHHhhccccccccccccccccccccccccccccccccc
Confidence 444456554 5677888765 268999999999999986 5789999999999999999988888999999999999
Q ss_pred cCcCCcchHhhccCCcCCEEcccCCccccccChhhhcCCCCCcEEEccCCccceeeccccccccccCHHhhcCCCCCCEE
Q 040774 315 ASAIEQLPMEIGQLTQLKLLDLSNCSKLKVIAPNVLSNLSQLEELYMANCSIEWEVLGLSIERSNASLVELKNLSRLTTL 394 (1035)
Q Consensus 315 ~~~l~~lp~~i~~L~~L~~L~l~~~~~l~~lp~~~l~~L~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~~L 394 (1035)
+|+++..|..+..+++|++|+++++. +..++...+..+.++++|++++|.+. ......+..+++|+.+
T Consensus 86 ~N~l~~~~~~~~~l~~L~~L~l~~~~-~~~~~~~~~~~l~~l~~L~l~~n~l~-----------~l~~~~~~~l~~l~~l 153 (266)
T d1p9ag_ 86 HNQLQSLPLLGQTLPALTVLDVSFNR-LTSLPLGALRGLGELQELYLKGNELK-----------TLPPGLLTPTPKLEKL 153 (266)
T ss_dssp SSCCSSCCCCTTTCTTCCEEECCSSC-CCCCCSSTTTTCTTCCEEECTTSCCC-----------CCCTTTTTTCTTCCEE
T ss_pred cccccccccccccccccccccccccc-cceeeccccccccccccccccccccc-----------eeccccccccccchhc
Confidence 99999989889999999999999997 77777777889999999999999876 3334556778899999
Q ss_pred EEeecCCCCCCCccccccccEEEEEEccccccCCcccccchhhhccCCceeeccccCccccceeecccccCccccccccC
Q 040774 395 EINILDAGILPSGFFSRKLERYRIVVGDTWDRFDKYKTRRTLKLKLNSRICLGEWRGMKNVEYLCLDELPGLTNVLHDLD 474 (1035)
Q Consensus 395 ~l~~~~~~~~~~~~~~~~L~~l~~~~~~~~~~~~~~~~~~~l~l~~~~~i~~~~~~~l~~L~~L~L~~~~~~~~~l~~l~ 474 (1035)
++++|....++... +.++++|++|+|+++. ++.+.+.+
T Consensus 154 ~l~~N~l~~~~~~~----------------------------------------~~~l~~L~~L~Ls~N~-L~~lp~~~- 191 (266)
T d1p9ag_ 154 SLANNNLTELPAGL----------------------------------------LNGLENLDTLLLQENS-LYTIPKGF- 191 (266)
T ss_dssp ECTTSCCSCCCTTT----------------------------------------TTTCTTCCEEECCSSC-CCCCCTTT-
T ss_pred ccccccccccCccc----------------------------------------cccccccceeecccCC-CcccChhH-
Confidence 99998876665432 4455667777777654 33333333
Q ss_pred ccccCCccEEEeecCC
Q 040774 475 GEGFAELKHLNVQNNS 490 (1035)
Q Consensus 475 ~~~l~~L~~L~l~~~~ 490 (1035)
..+++|+.|++++++
T Consensus 192 -~~~~~L~~L~L~~Np 206 (266)
T d1p9ag_ 192 -FGSHLLPFAFLHGNP 206 (266)
T ss_dssp -TTTCCCSEEECCSCC
T ss_pred -CCCCCCCEEEecCCC
Confidence 345677777777665
No 7
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.66 E-value=6.5e-15 Score=157.23 Aligned_cols=173 Identities=18% Similarity=0.312 Sum_probs=102.9
Q ss_pred CCccEEEecCCCCCCCCCC-C-CCCCcceeeccCCCCCCCCCChhhhcCCCCccEEEccCCcCccCcccccCCCCCcEEE
Q 040774 213 KKCSRISLYDNNISEIPQG-W-ECPQLEFFYNFAPNNSPLQIPDNIFIGMPKLKVLDFTRMRLLSLPSSIHLLTDLRTLC 290 (1035)
Q Consensus 213 ~~~~~l~l~~~~~~~l~~~-~-~~~~Lr~L~l~~~~~~~~~i~~~~f~~~~~Lr~L~Ls~~~i~~lp~~i~~L~~Lr~L~ 290 (1035)
..+++|++++|++.++++. + .+++|++|++.+ +....+++..|..+++|++|++++|+++.+|..+. ..++.|+
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~--n~~~~i~~~~f~~l~~L~~L~l~~n~l~~l~~~~~--~~l~~L~ 106 (305)
T d1xkua_ 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILIN--NKISKISPGAFAPLVKLERLYLSKNQLKELPEKMP--KTLQELR 106 (305)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS--SCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSSCC--TTCCEEE
T ss_pred CCCCEEECcCCcCCCcChhHhhcccccccccccc--ccccccchhhhhCCCccCEecccCCccCcCccchh--hhhhhhh
Confidence 4566677777666666642 2 566666666665 44555655556666667777776666666665433 3566666
Q ss_pred cCCCCCCCc--ccccCCCCCcEEecccCcCC---cchHhhccCCcCCEEcccCCccccccChhhhcCCCCCcEEEccCCc
Q 040774 291 LDSCQLEDI--RVIGELRKLEILSLQASAIE---QLPMEIGQLTQLKLLDLSNCSKLKVIAPNVLSNLSQLEELYMANCS 365 (1035)
Q Consensus 291 L~~~~l~~l--~~i~~L~~L~~L~L~~~~l~---~lp~~i~~L~~L~~L~l~~~~~l~~lp~~~l~~L~~L~~L~l~~~~ 365 (1035)
+.+|.+..+ ..+.....++.++...+... ..+..+..+++|+++++++|. +..+|.. -+++|++|++++|.
T Consensus 107 ~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~-l~~l~~~---~~~~L~~L~l~~n~ 182 (305)
T d1xkua_ 107 VHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTN-ITTIPQG---LPPSLTELHLDGNK 182 (305)
T ss_dssp CCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSC-CCSCCSS---CCTTCSEEECTTSC
T ss_pred ccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCC-ccccCcc---cCCccCEEECCCCc
Confidence 666666654 34455556666666655333 223445666667777776665 5555543 24566667766665
Q ss_pred cceeeccccccccccCHHhhcCCCCCCEEEEeecCCCCC
Q 040774 366 IEWEVLGLSIERSNASLVELKNLSRLTTLEINILDAGIL 404 (1035)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~l~~L~~L~~L~l~~~~~~~~ 404 (1035)
.. ......+.+++.++.|++++|....+
T Consensus 183 ~~-----------~~~~~~~~~~~~l~~L~~s~n~l~~~ 210 (305)
T d1xkua_ 183 IT-----------KVDAASLKGLNNLAKLGLSFNSISAV 210 (305)
T ss_dssp CC-----------EECTGGGTTCTTCCEEECCSSCCCEE
T ss_pred CC-----------CCChhHhhcccccccccccccccccc
Confidence 54 23344566666666666666654433
No 8
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.64 E-value=4.1e-16 Score=167.36 Aligned_cols=109 Identities=19% Similarity=0.328 Sum_probs=50.5
Q ss_pred cCCCCccEEEccC-CcCc-cCcccccCCCCCcEEEcCCCCCCCc--ccccCCCCCcEEecccCcCC-cchHhhccCCcCC
Q 040774 258 IGMPKLKVLDFTR-MRLL-SLPSSIHLLTDLRTLCLDSCQLEDI--RVIGELRKLEILSLQASAIE-QLPMEIGQLTQLK 332 (1035)
Q Consensus 258 ~~~~~Lr~L~Ls~-~~i~-~lp~~i~~L~~Lr~L~L~~~~l~~l--~~i~~L~~L~~L~L~~~~l~-~lp~~i~~L~~L~ 332 (1035)
.++++|++|+|++ |.+. .+|++|+++++|++|+|++|.+..+ ..+..+.+|+++++++|.+. .+|..++++++|+
T Consensus 73 ~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~ 152 (313)
T d1ogqa_ 73 ANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLV 152 (313)
T ss_dssp GGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCC
T ss_pred hcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccc
Confidence 3455555555543 3333 3455555555555555555554432 33444555555555554332 3444455555555
Q ss_pred EEcccCCccccccChhhhcCCCCC-cEEEccCCccc
Q 040774 333 LLDLSNCSKLKVIAPNVLSNLSQL-EELYMANCSIE 367 (1035)
Q Consensus 333 ~L~l~~~~~l~~lp~~~l~~L~~L-~~L~l~~~~~~ 367 (1035)
++++++|.....+|.. ++++.++ +.+++++|.+.
T Consensus 153 ~l~l~~n~l~~~ip~~-~~~l~~l~~~l~~~~n~l~ 187 (313)
T d1ogqa_ 153 GITFDGNRISGAIPDS-YGSFSKLFTSMTISRNRLT 187 (313)
T ss_dssp EEECCSSCCEEECCGG-GGCCCTTCCEEECCSSEEE
T ss_pred eeeccccccccccccc-ccccccccccccccccccc
Confidence 5555554422234433 4444433 44444444443
No 9
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.62 E-value=2e-14 Score=157.19 Aligned_cols=74 Identities=28% Similarity=0.420 Sum_probs=37.2
Q ss_pred CCccEEEccCCcCccCcccccCCCCCcEEEcCCCCCCCcccccCCCCCcEEecccCcCCcchHhhccCCcCCEEcccCCc
Q 040774 261 PKLKVLDFTRMRLLSLPSSIHLLTDLRTLCLDSCQLEDIRVIGELRKLEILSLQASAIEQLPMEIGQLTQLKLLDLSNCS 340 (1035)
Q Consensus 261 ~~Lr~L~Ls~~~i~~lp~~i~~L~~Lr~L~L~~~~l~~l~~i~~L~~L~~L~L~~~~l~~lp~~i~~L~~L~~L~l~~~~ 340 (1035)
++|++|++++|.++++|+.+ .+|+.|++++|.++.++.+. ..|++|++++|.+..+|. ++.+++|++|+++++.
T Consensus 58 ~~L~~L~Ls~N~l~~lp~~~---~~L~~L~l~~n~l~~l~~lp--~~L~~L~L~~n~l~~lp~-~~~l~~L~~L~l~~~~ 131 (353)
T d1jl5a_ 58 PHLESLVASCNSLTELPELP---QSLKSLLVDNNNLKALSDLP--PLLEYLGVSNNQLEKLPE-LQNSSFLKIIDVDNNS 131 (353)
T ss_dssp TTCSEEECCSSCCSSCCCCC---TTCCEEECCSSCCSCCCSCC--TTCCEEECCSSCCSSCCC-CTTCTTCCEEECCSSC
T ss_pred CCCCEEECCCCCCcccccch---hhhhhhhhhhcccchhhhhc--cccccccccccccccccc-hhhhccceeecccccc
Confidence 34555555555555555432 24555555555544443221 235555555555555553 4555555555555554
No 10
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=5.6e-15 Score=155.69 Aligned_cols=143 Identities=20% Similarity=0.305 Sum_probs=67.5
Q ss_pred cCCCCCCCCCCCCCCCcceeeccCCCCCCCCCChhhhcCCCCccEEEccCCcCccC-cccccCCCCCcEEEcCC-CCCCC
Q 040774 221 YDNNISEIPQGWECPQLEFFYNFAPNNSPLQIPDNIFIGMPKLKVLDFTRMRLLSL-PSSIHLLTDLRTLCLDS-CQLED 298 (1035)
Q Consensus 221 ~~~~~~~l~~~~~~~~Lr~L~l~~~~~~~~~i~~~~f~~~~~Lr~L~Ls~~~i~~l-p~~i~~L~~Lr~L~L~~-~~l~~ 298 (1035)
++..+..+|..+. +++++|++++ +....+|+..|.+++.|++|++++|.+..+ +..+..+..++.+.... +.++.
T Consensus 19 ~~~~L~~iP~~ip-~~~~~L~Ls~--N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~ 95 (284)
T d1ozna_ 19 PQQGLQAVPVGIP-AASQRIFLHG--NRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRS 95 (284)
T ss_dssp CSSCCSSCCTTCC-TTCSEEECTT--SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCC
T ss_pred CCCCCCccCCCCC-CCCCEEECcC--CcCCCCCHHHhhcccccccccccccccccccccccccccccccccccccccccc
Confidence 3334444444332 3445555554 344455554455555555555555555544 22334444555544432 22333
Q ss_pred c--ccccCCCCCcEEecccCcCCcchH-hhccCCcCCEEcccCCccccccChhhhcCCCCCcEEEccCCccc
Q 040774 299 I--RVIGELRKLEILSLQASAIEQLPM-EIGQLTQLKLLDLSNCSKLKVIAPNVLSNLSQLEELYMANCSIE 367 (1035)
Q Consensus 299 l--~~i~~L~~L~~L~L~~~~l~~lp~-~i~~L~~L~~L~l~~~~~l~~lp~~~l~~L~~L~~L~l~~~~~~ 367 (1035)
+ ..++++++|++|++++|.+..++. .+....+|+.+++++|. ++.+|++.++.+++|++|++++|.+.
T Consensus 96 l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~-l~~i~~~~f~~~~~L~~L~l~~N~l~ 166 (284)
T d1ozna_ 96 VDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNA-LQALPDDTFRDLGNLTHLFLHGNRIS 166 (284)
T ss_dssp CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSC-CCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred ccchhhcccccCCEEecCCcccccccccccchhcccchhhhcccc-ccccChhHhccccchhhcccccCccc
Confidence 3 344555555555555554443332 24445555555555554 45554444445555555555555443
No 11
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=7.6e-15 Score=154.67 Aligned_cols=187 Identities=27% Similarity=0.433 Sum_probs=159.8
Q ss_pred CCCCCC---CCccEEEecCCCCCCCCCC--CCCCCcceeeccCCCCCCCCCChhhhcCCCCccEEEcc-CCcCccC-ccc
Q 040774 207 PRQWPD---KKCSRISLYDNNISEIPQG--WECPQLEFFYNFAPNNSPLQIPDNIFIGMPKLKVLDFT-RMRLLSL-PSS 279 (1035)
Q Consensus 207 ~~~~~~---~~~~~l~l~~~~~~~l~~~--~~~~~Lr~L~l~~~~~~~~~i~~~~f~~~~~Lr~L~Ls-~~~i~~l-p~~ 279 (1035)
.+.+|. ..++.|++++|.++.++.. .++++|++|++++ +....++...|..+..++.++.. .+.+..+ |..
T Consensus 23 L~~iP~~ip~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~--n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~ 100 (284)
T d1ozna_ 23 LQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHS--NVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPAT 100 (284)
T ss_dssp CSSCCTTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCS--SCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTT
T ss_pred CCccCCCCCCCCCEEECcCCcCCCCCHHHhhcccccccccccc--ccccccccccccccccccccccccccccccccchh
Confidence 445443 5789999999999988864 3899999999987 77888888888999999999875 5567777 668
Q ss_pred ccCCCCCcEEEcCCCCCCCc--ccccCCCCCcEEecccCcCCcchHh-hccCCcCCEEcccCCccccccChhhhcCCCCC
Q 040774 280 IHLLTDLRTLCLDSCQLEDI--RVIGELRKLEILSLQASAIEQLPME-IGQLTQLKLLDLSNCSKLKVIAPNVLSNLSQL 356 (1035)
Q Consensus 280 i~~L~~Lr~L~L~~~~l~~l--~~i~~L~~L~~L~L~~~~l~~lp~~-i~~L~~L~~L~l~~~~~l~~lp~~~l~~L~~L 356 (1035)
++++++|++|++++|.+..+ ..++...+|+++++++|.++.+|.. +..+++|++|++++|. ++.+++..+.++++|
T Consensus 101 ~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~-l~~l~~~~f~~l~~L 179 (284)
T d1ozna_ 101 FHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNR-ISSVPERAFRGLHSL 179 (284)
T ss_dssp TTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC-CCEECTTTTTTCTTC
T ss_pred hcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCc-ccccchhhhcccccc
Confidence 99999999999999998866 6788899999999999999988754 7889999999999997 899988889999999
Q ss_pred cEEEccCCccceeeccccccccccCHHhhcCCCCCCEEEEeecCCCCCCCc
Q 040774 357 EELYMANCSIEWEVLGLSIERSNASLVELKNLSRLTTLEINILDAGILPSG 407 (1035)
Q Consensus 357 ~~L~l~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~~L~l~~~~~~~~~~~ 407 (1035)
+++++++|.+. ...+..+..+++|++|+++.|....++..
T Consensus 180 ~~l~l~~N~l~-----------~i~~~~f~~l~~L~~L~l~~N~i~~~~~~ 219 (284)
T d1ozna_ 180 DRLLLHQNRVA-----------HVHPHAFRDLGRLMTLYLFANNLSALPTE 219 (284)
T ss_dssp CEEECCSSCCC-----------EECTTTTTTCTTCCEEECCSSCCSCCCHH
T ss_pred chhhhhhcccc-----------ccChhHhhhhhhccccccccccccccccc
Confidence 99999999987 44567789999999999999987666543
No 12
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.60 E-value=9.5e-16 Score=164.42 Aligned_cols=174 Identities=20% Similarity=0.257 Sum_probs=122.0
Q ss_pred CCccEEEecCCCCC---CCCCCC-CCCCcceeeccCCCCCCCCCChhhhcCCCCccEEEccCCcCccC-cccccCCCCCc
Q 040774 213 KKCSRISLYDNNIS---EIPQGW-ECPQLEFFYNFAPNNSPLQIPDNIFIGMPKLKVLDFTRMRLLSL-PSSIHLLTDLR 287 (1035)
Q Consensus 213 ~~~~~l~l~~~~~~---~l~~~~-~~~~Lr~L~l~~~~~~~~~i~~~~f~~~~~Lr~L~Ls~~~i~~l-p~~i~~L~~Lr 287 (1035)
.+++.+++.++.+. .+|+.+ .+++|++|++++.++..+.+|+. |.++++|++|++++|.+..+ |..+..+.+|+
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~-i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~ 128 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPA-IAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGG-GGGCTTCSEEEEEEECCEEECCGGGGGCTTCC
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccc-cccccccchhhhccccccccccccccchhhhc
Confidence 36777888887766 356555 67888888887534556677776 46788888888888887765 55677788888
Q ss_pred EEEcCCCCCCCc--ccccCCCCCcEEecccCcCC-cchHhhccCCcC-CEEcccCCccccccChhhhcCCCCCcEEEccC
Q 040774 288 TLCLDSCQLEDI--RVIGELRKLEILSLQASAIE-QLPMEIGQLTQL-KLLDLSNCSKLKVIAPNVLSNLSQLEELYMAN 363 (1035)
Q Consensus 288 ~L~L~~~~l~~l--~~i~~L~~L~~L~L~~~~l~-~lp~~i~~L~~L-~~L~l~~~~~l~~lp~~~l~~L~~L~~L~l~~ 363 (1035)
++++++|.+... ..++++++|+++++++|.+. .+|..+..+.++ +.+++++|. +...++..++++..+ .+++..
T Consensus 129 ~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~-l~~~~~~~~~~l~~~-~l~l~~ 206 (313)
T d1ogqa_ 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNR-LTGKIPPTFANLNLA-FVDLSR 206 (313)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSE-EEEECCGGGGGCCCS-EEECCS
T ss_pred ccccccccccccCchhhccCcccceeecccccccccccccccccccccccccccccc-ccccccccccccccc-cccccc
Confidence 888888775532 67888888888888888776 677777777775 777777776 554444446666544 577776
Q ss_pred CccceeeccccccccccCHHhhcCCCCCCEEEEeecC
Q 040774 364 CSIEWEVLGLSIERSNASLVELKNLSRLTTLEINILD 400 (1035)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~l~~L~~L~~L~l~~~~ 400 (1035)
+... +..+..+..+++++.++++.+.
T Consensus 207 ~~~~-----------~~~~~~~~~~~~l~~l~~~~~~ 232 (313)
T d1ogqa_ 207 NMLE-----------GDASVLFGSDKNTQKIHLAKNS 232 (313)
T ss_dssp SEEE-----------ECCGGGCCTTSCCSEEECCSSE
T ss_pred cccc-----------cccccccccccccccccccccc
Confidence 6654 3455566677777777776654
No 13
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.59 E-value=1.1e-14 Score=145.23 Aligned_cols=164 Identities=24% Similarity=0.353 Sum_probs=141.0
Q ss_pred CCccEEEecCCCCCCCCCCCCCCCcceeeccCCCCCCCCCChhhhcCCCCccEEEccCCcCccCcccccCCCCCcEEEcC
Q 040774 213 KKCSRISLYDNNISEIPQGWECPQLEFFYNFAPNNSPLQIPDNIFIGMPKLKVLDFTRMRLLSLPSSIHLLTDLRTLCLD 292 (1035)
Q Consensus 213 ~~~~~l~l~~~~~~~l~~~~~~~~Lr~L~l~~~~~~~~~i~~~~f~~~~~Lr~L~Ls~~~i~~lp~~i~~L~~Lr~L~L~ 292 (1035)
..++++.+.++.+..++..-.+++|++|++++ +....+++ +..+++|++|++++|.++.+| .+..+++|++|+++
T Consensus 46 ~~L~~L~l~~~~i~~l~~l~~l~~L~~L~L~~--n~i~~l~~--~~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~ 120 (210)
T d1h6ta2 46 NSIDQIIANNSDIKSVQGIQYLPNVTKLFLNG--NKLTDIKP--LANLKNLGWLFLDENKVKDLS-SLKDLKKLKSLSLE 120 (210)
T ss_dssp HTCCEEECTTSCCCCCTTGGGCTTCCEEECCS--SCCCCCGG--GTTCTTCCEEECCSSCCCCGG-GGTTCTTCCEEECT
T ss_pred cCccEEECcCCCCCCchhHhhCCCCCEEeCCC--ccccCccc--cccCccccccccccccccccc-cccccccccccccc
Confidence 46788999999988887655799999999997 56666764 578999999999999999887 58899999999999
Q ss_pred CCCCCCcccccCCCCCcEEecccCcCCcchHhhccCCcCCEEcccCCccccccChhhhcCCCCCcEEEccCCccceeecc
Q 040774 293 SCQLEDIRVIGELRKLEILSLQASAIEQLPMEIGQLTQLKLLDLSNCSKLKVIAPNVLSNLSQLEELYMANCSIEWEVLG 372 (1035)
Q Consensus 293 ~~~l~~l~~i~~L~~L~~L~L~~~~l~~lp~~i~~L~~L~~L~l~~~~~l~~lp~~~l~~L~~L~~L~l~~~~~~~~~~~ 372 (1035)
+|.+..++.+..+.+|+++++++|.++..+ .+..+++|+++++++|. +..+++ ++++++|++|++++|.+.
T Consensus 121 ~~~~~~~~~l~~l~~l~~l~~~~n~l~~~~-~~~~l~~L~~l~l~~n~-l~~i~~--l~~l~~L~~L~Ls~N~i~----- 191 (210)
T d1h6ta2 121 HNGISDINGLVHLPQLESLYLGNNKITDIT-VLSRLTKLDTLSLEDNQ-ISDIVP--LAGLTKLQNLYLSKNHIS----- 191 (210)
T ss_dssp TSCCCCCGGGGGCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSC-CCCCGG--GTTCTTCCEEECCSSCCC-----
T ss_pred cccccccccccccccccccccccccccccc-ccccccccccccccccc-cccccc--ccCCCCCCEEECCCCCCC-----
Confidence 999988888999999999999999988765 57889999999999997 777765 889999999999999876
Q ss_pred ccccccccCHHhhcCCCCCCEEEEee
Q 040774 373 LSIERSNASLVELKNLSRLTTLEINI 398 (1035)
Q Consensus 373 ~~~~~~~~~~~~l~~L~~L~~L~l~~ 398 (1035)
.+..+.++++|+.|++++
T Consensus 192 --------~l~~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 192 --------DLRALAGLKNLDVLELFS 209 (210)
T ss_dssp --------BCGGGTTCTTCSEEEEEE
T ss_pred --------CChhhcCCCCCCEEEccC
Confidence 234688999999999875
No 14
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.59 E-value=1.3e-14 Score=143.39 Aligned_cols=160 Identities=23% Similarity=0.293 Sum_probs=125.0
Q ss_pred CCccEEEecCCCCCCCCCCCCCCCcceeeccCCCCCCCCCChhhhcCCCCccEEEccCCcCccCcccccCCCCCcEEEcC
Q 040774 213 KKCSRISLYDNNISEIPQGWECPQLEFFYNFAPNNSPLQIPDNIFIGMPKLKVLDFTRMRLLSLPSSIHLLTDLRTLCLD 292 (1035)
Q Consensus 213 ~~~~~l~l~~~~~~~l~~~~~~~~Lr~L~l~~~~~~~~~i~~~~f~~~~~Lr~L~Ls~~~i~~lp~~i~~L~~Lr~L~L~ 292 (1035)
..++++++.++.+..++..-.+++|++|++++ +....+++ |.++++|++|++++|.+..++. +.++++|++|+++
T Consensus 40 ~~l~~L~l~~~~i~~l~~l~~l~nL~~L~Ls~--N~l~~~~~--l~~l~~L~~L~l~~n~~~~~~~-l~~l~~L~~L~l~ 114 (199)
T d2omxa2 40 DQVTTLQADRLGIKSIDGVEYLNNLTQINFSN--NQLTDITP--LKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLF 114 (199)
T ss_dssp TTCCEEECTTSCCCCCTTGGGCTTCCEEECCS--SCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-GTTCTTCSEEECC
T ss_pred cCCCEEECCCCCCCCccccccCCCcCcCcccc--ccccCccc--ccCCcccccccccccccccccc-ccccccccccccc
Confidence 47788888888888776555788888888887 45556654 6788888888888888887764 7788888888888
Q ss_pred CCCCCCcccccCCCCCcEEecccCcCCcchHhhccCCcCCEEcccCCccccccChhhhcCCCCCcEEEccCCccceeecc
Q 040774 293 SCQLEDIRVIGELRKLEILSLQASAIEQLPMEIGQLTQLKLLDLSNCSKLKVIAPNVLSNLSQLEELYMANCSIEWEVLG 372 (1035)
Q Consensus 293 ~~~l~~l~~i~~L~~L~~L~L~~~~l~~lp~~i~~L~~L~~L~l~~~~~l~~lp~~~l~~L~~L~~L~l~~~~~~~~~~~ 372 (1035)
+|.+..+..+..+++|++|++++|.+..+| .+..+++|++|++.+|. ++.+++ ++++++|++|++++|++.
T Consensus 115 ~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~l~~~~~L~~L~l~~n~-l~~l~~--l~~l~~L~~L~ls~N~i~----- 185 (199)
T d2omxa2 115 NNQITDIDPLKNLTNLNRLELSSNTISDIS-ALSGLTSLQQLNFSSNQ-VTDLKP--LANLTTLERLDISSNKVS----- 185 (199)
T ss_dssp SSCCCCCGGGTTCTTCSEEECCSSCCCCCG-GGTTCTTCSEEECCSSC-CCCCGG--GTTCTTCCEEECCSSCCC-----
T ss_pred ccccccccccchhhhhHHhhhhhhhhcccc-ccccccccccccccccc-ccCCcc--ccCCCCCCEEECCCCCCC-----
Confidence 888877777888888888888888887765 47788888888888886 777764 788888888888888765
Q ss_pred ccccccccCHHhhcCCCCCCEE
Q 040774 373 LSIERSNASLVELKNLSRLTTL 394 (1035)
Q Consensus 373 ~~~~~~~~~~~~l~~L~~L~~L 394 (1035)
.+..++.+++|++|
T Consensus 186 --------~i~~l~~L~~L~~L 199 (199)
T d2omxa2 186 --------DISVLAKLTNLESL 199 (199)
T ss_dssp --------CCGGGGGCTTCSEE
T ss_pred --------CCccccCCCCCCcC
Confidence 23457777777765
No 15
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.58 E-value=1.9e-13 Score=149.28 Aligned_cols=137 Identities=24% Similarity=0.329 Sum_probs=107.8
Q ss_pred CccEEEecCCCCCCCCCCCCCCCcceeeccCCCCCCCCCChhhhcCCCCccEEEccCCcCccCcccccCCCCCcEEEcCC
Q 040774 214 KCSRISLYDNNISEIPQGWECPQLEFFYNFAPNNSPLQIPDNIFIGMPKLKVLDFTRMRLLSLPSSIHLLTDLRTLCLDS 293 (1035)
Q Consensus 214 ~~~~l~l~~~~~~~l~~~~~~~~Lr~L~l~~~~~~~~~i~~~~f~~~~~Lr~L~Ls~~~i~~lp~~i~~L~~Lr~L~L~~ 293 (1035)
.+++++++++.++.+|+. .++|++|++++ +...++|.. +.+|+.|++++|.++.+++-. ..|++|++++
T Consensus 39 ~l~~LdLs~~~L~~lp~~--~~~L~~L~Ls~--N~l~~lp~~----~~~L~~L~l~~n~l~~l~~lp---~~L~~L~L~~ 107 (353)
T d1jl5a_ 39 QAHELELNNLGLSSLPEL--PPHLESLVASC--NSLTELPEL----PQSLKSLLVDNNNLKALSDLP---PLLEYLGVSN 107 (353)
T ss_dssp TCSEEECTTSCCSCCCSC--CTTCSEEECCS--SCCSSCCCC----CTTCCEEECCSSCCSCCCSCC---TTCCEEECCS
T ss_pred CCCEEEeCCCCCCCCCCC--CCCCCEEECCC--CCCcccccc----hhhhhhhhhhhcccchhhhhc---cccccccccc
Confidence 567899999999999864 47899999997 677788853 578999999999998876421 4699999999
Q ss_pred CCCCCcccccCCCCCcEEecccCcCCcchHhhccCCcCCEEcccCCccccccChhhhcCCCCCcEEEccCCccc
Q 040774 294 CQLEDIRVIGELRKLEILSLQASAIEQLPMEIGQLTQLKLLDLSNCSKLKVIAPNVLSNLSQLEELYMANCSIE 367 (1035)
Q Consensus 294 ~~l~~l~~i~~L~~L~~L~L~~~~l~~lp~~i~~L~~L~~L~l~~~~~l~~lp~~~l~~L~~L~~L~l~~~~~~ 367 (1035)
|.++.++.++++++|++|+++++.+...|.. ...+..+.+..+. ..... . ++.+..++.|.+.++...
T Consensus 108 n~l~~lp~~~~l~~L~~L~l~~~~~~~~~~~---~~~l~~l~~~~~~-~~~~~-~-l~~l~~l~~L~l~~n~~~ 175 (353)
T d1jl5a_ 108 NQLEKLPELQNSSFLKIIDVDNNSLKKLPDL---PPSLEFIAAGNNQ-LEELP-E-LQNLPFLTAIYADNNSLK 175 (353)
T ss_dssp SCCSSCCCCTTCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSC-CSSCC-C-CTTCTTCCEEECCSSCCS
T ss_pred cccccccchhhhccceeeccccccccccccc---cccccchhhcccc-ccccc-c-ccccccceeccccccccc
Confidence 9999998889999999999999988877654 3456666666654 22222 2 677888899988887654
No 16
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.57 E-value=1e-14 Score=144.16 Aligned_cols=162 Identities=23% Similarity=0.290 Sum_probs=137.4
Q ss_pred CCCCcceeeccCCCCCCCCCChhhhcCCCCccEEEccCCcCccCcccccCCCCCcEEEcCCCCCCCcccccCCCCCcEEe
Q 040774 233 ECPQLEFFYNFAPNNSPLQIPDNIFIGMPKLKVLDFTRMRLLSLPSSIHLLTDLRTLCLDSCQLEDIRVIGELRKLEILS 312 (1035)
Q Consensus 233 ~~~~Lr~L~l~~~~~~~~~i~~~~f~~~~~Lr~L~Ls~~~i~~lp~~i~~L~~Lr~L~L~~~~l~~l~~i~~L~~L~~L~ 312 (1035)
++.++++|++.+ +....++. ++.+++|++|++++|.++.++. ++++++|++|++++|.+..++.++++++|++|+
T Consensus 38 ~l~~l~~L~l~~--~~i~~l~~--l~~l~nL~~L~Ls~N~l~~~~~-l~~l~~L~~L~l~~n~~~~~~~l~~l~~L~~L~ 112 (199)
T d2omxa2 38 DLDQVTTLQADR--LGIKSIDG--VEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITPLANLTNLTGLT 112 (199)
T ss_dssp HHTTCCEEECTT--SCCCCCTT--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGGGTTCTTCSEEE
T ss_pred HhcCCCEEECCC--CCCCCccc--cccCCCcCcCccccccccCccc-ccCCccccccccccccccccccccccccccccc
Confidence 567899999997 55666653 5789999999999999999875 999999999999999999998899999999999
Q ss_pred cccCcCCcchHhhccCCcCCEEcccCCccccccChhhhcCCCCCcEEEccCCccceeeccccccccccCHHhhcCCCCCC
Q 040774 313 LQASAIEQLPMEIGQLTQLKLLDLSNCSKLKVIAPNVLSNLSQLEELYMANCSIEWEVLGLSIERSNASLVELKNLSRLT 392 (1035)
Q Consensus 313 L~~~~l~~lp~~i~~L~~L~~L~l~~~~~l~~lp~~~l~~L~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~ 392 (1035)
++++.+..++ .+..+++|+.|++++|. +..++. +..+++|++|++.+|.+. .+..++++++|+
T Consensus 113 l~~~~~~~~~-~~~~l~~L~~L~l~~n~-l~~~~~--l~~~~~L~~L~l~~n~l~-------------~l~~l~~l~~L~ 175 (199)
T d2omxa2 113 LFNNQITDID-PLKNLTNLNRLELSSNT-ISDISA--LSGLTSLQQLNFSSNQVT-------------DLKPLANLTTLE 175 (199)
T ss_dssp CCSSCCCCCG-GGTTCTTCSEEECCSSC-CCCCGG--GTTCTTCSEEECCSSCCC-------------CCGGGTTCTTCC
T ss_pred cccccccccc-ccchhhhhHHhhhhhhh-hccccc--cccccccccccccccccc-------------CCccccCCCCCC
Confidence 9999887765 48899999999999997 777754 889999999999999876 234688999999
Q ss_pred EEEEeecCCCCCCCccccccccEE
Q 040774 393 TLEINILDAGILPSGFFSRKLERY 416 (1035)
Q Consensus 393 ~L~l~~~~~~~~~~~~~~~~L~~l 416 (1035)
+|++++|.++.++.-..+.+|+.|
T Consensus 176 ~L~ls~N~i~~i~~l~~L~~L~~L 199 (199)
T d2omxa2 176 RLDISSNKVSDISVLAKLTNLESL 199 (199)
T ss_dssp EEECCSSCCCCCGGGGGCTTCSEE
T ss_pred EEECCCCCCCCCccccCCCCCCcC
Confidence 999999998777644455555543
No 17
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.53 E-value=2.5e-14 Score=144.96 Aligned_cols=104 Identities=23% Similarity=0.385 Sum_probs=48.6
Q ss_pred cCCCCccEEEccCCcCccCcccccCCCCCcEEEcCCCCCCCcccccCCCCCcEEecccCcCCcchHhhccCCcCCEEccc
Q 040774 258 IGMPKLKVLDFTRMRLLSLPSSIHLLTDLRTLCLDSCQLEDIRVIGELRKLEILSLQASAIEQLPMEIGQLTQLKLLDLS 337 (1035)
Q Consensus 258 ~~~~~Lr~L~Ls~~~i~~lp~~i~~L~~Lr~L~L~~~~l~~l~~i~~L~~L~~L~L~~~~l~~lp~~i~~L~~L~~L~l~ 337 (1035)
.++++|++|++++|.+..+++ +.++.+|+++++++|.++.++.+.++++|++++++++....++. +.....++.+.++
T Consensus 60 ~~l~~L~~L~ls~n~i~~~~~-l~~l~~l~~l~~~~n~~~~i~~l~~l~~L~~l~l~~~~~~~~~~-~~~~~~~~~l~~~ 137 (227)
T d1h6ua2 60 QYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTP-LAGLSNLQVLYLD 137 (227)
T ss_dssp GGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCSCCGGGTTCTTCCEEECTTSCCCCCGG-GTTCTTCCEEECC
T ss_pred hcCCCCcEeecCCceeecccc-ccccccccccccccccccccccccccccccccccccccccccch-hccccchhhhhch
Confidence 445555555555555544432 44555555555555555544445555555555555544443321 3344445555554
Q ss_pred CCccccccChhhhcCCCCCcEEEccCCcc
Q 040774 338 NCSKLKVIAPNVLSNLSQLEELYMANCSI 366 (1035)
Q Consensus 338 ~~~~l~~lp~~~l~~L~~L~~L~l~~~~~ 366 (1035)
++. +...+. +.+.++|++|++++|.+
T Consensus 138 ~~~-~~~~~~--~~~~~~L~~L~l~~n~~ 163 (227)
T d1h6ua2 138 LNQ-ITNISP--LAGLTNLQYLSIGNAQV 163 (227)
T ss_dssp SSC-CCCCGG--GGGCTTCCEEECCSSCC
T ss_pred hhh-hchhhh--hcccccccccccccccc
Confidence 443 222221 34444555555554443
No 18
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.53 E-value=3.3e-14 Score=141.67 Aligned_cols=165 Identities=22% Similarity=0.302 Sum_probs=141.3
Q ss_pred CCCCcceeeccCCCCCCCCCChhhhcCCCCccEEEccCCcCccCcccccCCCCCcEEEcCCCCCCCcccccCCCCCcEEe
Q 040774 233 ECPQLEFFYNFAPNNSPLQIPDNIFIGMPKLKVLDFTRMRLLSLPSSIHLLTDLRTLCLDSCQLEDIRVIGELRKLEILS 312 (1035)
Q Consensus 233 ~~~~Lr~L~l~~~~~~~~~i~~~~f~~~~~Lr~L~Ls~~~i~~lp~~i~~L~~Lr~L~L~~~~l~~l~~i~~L~~L~~L~ 312 (1035)
++.+|+.|++.+ +....++. ++.+++|++|++++|.++.++ .++.+++|++|++++|+++.++.++++++|++|+
T Consensus 44 ~L~~L~~L~l~~--~~i~~l~~--l~~l~~L~~L~L~~n~i~~l~-~~~~l~~L~~L~l~~n~i~~l~~l~~l~~L~~L~ 118 (210)
T d1h6ta2 44 ELNSIDQIIANN--SDIKSVQG--IQYLPNVTKLFLNGNKLTDIK-PLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLS 118 (210)
T ss_dssp HHHTCCEEECTT--SCCCCCTT--GGGCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCSSCCCCGGGGTTCTTCCEEE
T ss_pred HhcCccEEECcC--CCCCCchh--HhhCCCCCEEeCCCccccCcc-ccccCccccccccccccccccccccccccccccc
Confidence 356789999986 56666654 578999999999999999987 4789999999999999999998899999999999
Q ss_pred cccCcCCcchHhhccCCcCCEEcccCCccccccChhhhcCCCCCcEEEccCCccceeeccccccccccCHHhhcCCCCCC
Q 040774 313 LQASAIEQLPMEIGQLTQLKLLDLSNCSKLKVIAPNVLSNLSQLEELYMANCSIEWEVLGLSIERSNASLVELKNLSRLT 392 (1035)
Q Consensus 313 L~~~~l~~lp~~i~~L~~L~~L~l~~~~~l~~lp~~~l~~L~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~ 392 (1035)
+++|.+..++ .+..+++|+.+++++|. +...+. ++++++|+++++++|.+. .+..++++++|+
T Consensus 119 l~~~~~~~~~-~l~~l~~l~~l~~~~n~-l~~~~~--~~~l~~L~~l~l~~n~l~-------------~i~~l~~l~~L~ 181 (210)
T d1h6ta2 119 LEHNGISDIN-GLVHLPQLESLYLGNNK-ITDITV--LSRLTKLDTLSLEDNQIS-------------DIVPLAGLTKLQ 181 (210)
T ss_dssp CTTSCCCCCG-GGGGCTTCCEEECCSSC-CCCCGG--GGGCTTCSEEECCSSCCC-------------CCGGGTTCTTCC
T ss_pred cccccccccc-ccccccccccccccccc-cccccc--cccccccccccccccccc-------------ccccccCCCCCC
Confidence 9999988876 58899999999999987 776654 788999999999999876 234588999999
Q ss_pred EEEEeecCCCCCCCccccccccEEEEE
Q 040774 393 TLEINILDAGILPSGFFSRKLERYRIV 419 (1035)
Q Consensus 393 ~L~l~~~~~~~~~~~~~~~~L~~l~~~ 419 (1035)
.|++++|.++.++.-..+.+|+.|.+.
T Consensus 182 ~L~Ls~N~i~~l~~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 182 NLYLSKNHISDLRALAGLKNLDVLELF 208 (210)
T ss_dssp EEECCSSCCCBCGGGTTCTTCSEEEEE
T ss_pred EEECCCCCCCCChhhcCCCCCCEEEcc
Confidence 999999998888754577888888764
No 19
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.49 E-value=4e-13 Score=135.85 Aligned_cols=185 Identities=20% Similarity=0.263 Sum_probs=149.7
Q ss_pred CCccEEEecCCCCCCCCCCCCCCCcceeeccCCCCCCCCCChhhhcCCCCccEEEccCCcCccCcccccCCCCCcEEEcC
Q 040774 213 KKCSRISLYDNNISEIPQGWECPQLEFFYNFAPNNSPLQIPDNIFIGMPKLKVLDFTRMRLLSLPSSIHLLTDLRTLCLD 292 (1035)
Q Consensus 213 ~~~~~l~l~~~~~~~l~~~~~~~~Lr~L~l~~~~~~~~~i~~~~f~~~~~Lr~L~Ls~~~i~~lp~~i~~L~~Lr~L~L~ 292 (1035)
..++.+++.+|.+..++....+++|++|++++ +....+++ |..+++|+++++++|.++.++ .+..+++|++++++
T Consensus 41 ~~L~~L~l~~~~i~~l~~l~~l~~L~~L~ls~--n~i~~~~~--l~~l~~l~~l~~~~n~~~~i~-~l~~l~~L~~l~l~ 115 (227)
T d1h6ua2 41 DGITTLSAFGTGVTTIEGVQYLNNLIGLELKD--NQITDLAP--LKNLTKITELELSGNPLKNVS-AIAGLQSIKTLDLT 115 (227)
T ss_dssp HTCCEEECTTSCCCCCTTGGGCTTCCEEECCS--SCCCCCGG--GTTCCSCCEEECCSCCCSCCG-GGTTCTTCCEEECT
T ss_pred CCcCEEECCCCCCCcchhHhcCCCCcEeecCC--ceeecccc--ccccccccccccccccccccc-cccccccccccccc
Confidence 47888999999998887655899999999987 55555554 688999999999999988875 58889999999999
Q ss_pred CCCCCCcccccCCCCCcEEecccCcCCcchHhhccCCcCCEEcccCCccccccChhhhcCCCCCcEEEccCCccceeecc
Q 040774 293 SCQLEDIRVIGELRKLEILSLQASAIEQLPMEIGQLTQLKLLDLSNCSKLKVIAPNVLSNLSQLEELYMANCSIEWEVLG 372 (1035)
Q Consensus 293 ~~~l~~l~~i~~L~~L~~L~L~~~~l~~lp~~i~~L~~L~~L~l~~~~~l~~lp~~~l~~L~~L~~L~l~~~~~~~~~~~ 372 (1035)
++....+..+.....++++.++++.+...+ .+...++|++|++++|. +...+. ++++++|++|++++|.+.
T Consensus 116 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~L~~L~l~~n~-~~~~~~--l~~l~~L~~L~Ls~n~l~----- 186 (227)
T d1h6ua2 116 STQITDVTPLAGLSNLQVLYLDLNQITNIS-PLAGLTNLQYLSIGNAQ-VSDLTP--LANLSKLTTLKADDNKIS----- 186 (227)
T ss_dssp TSCCCCCGGGTTCTTCCEEECCSSCCCCCG-GGGGCTTCCEEECCSSC-CCCCGG--GTTCTTCCEEECCSSCCC-----
T ss_pred cccccccchhccccchhhhhchhhhhchhh-hhccccccccccccccc-cccchh--hcccccceecccCCCccC-----
Confidence 998888888888899999999888777554 37788899999999886 655544 788999999999998875
Q ss_pred ccccccccCHHhhcCCCCCCEEEEeecCCCCCCCccccccccEEEEE
Q 040774 373 LSIERSNASLVELKNLSRLTTLEINILDAGILPSGFFSRKLERYRIV 419 (1035)
Q Consensus 373 ~~~~~~~~~~~~l~~L~~L~~L~l~~~~~~~~~~~~~~~~L~~l~~~ 419 (1035)
.+..++++++|++|++++|.++.++.-....+|+.+.+.
T Consensus 187 --------~l~~l~~l~~L~~L~Ls~N~lt~i~~l~~l~~L~~L~ls 225 (227)
T d1h6ua2 187 --------DISPLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLT 225 (227)
T ss_dssp --------CCGGGGGCTTCCEEECTTSCCCBCGGGTTCTTCCEEEEE
T ss_pred --------CChhhcCCCCCCEEECcCCcCCCCcccccCCCCCEEEee
Confidence 234578889999999999988777754466777777653
No 20
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44 E-value=9.2e-14 Score=131.10 Aligned_cols=131 Identities=16% Similarity=0.214 Sum_probs=103.9
Q ss_pred hcCCCCccEEEccCCcCccCcccccCCCCCcEEEcCCCCCCCcccccCCCCCcEEecccCcCCcchHh-hccCCcCCEEc
Q 040774 257 FIGMPKLKVLDFTRMRLLSLPSSIHLLTDLRTLCLDSCQLEDIRVIGELRKLEILSLQASAIEQLPME-IGQLTQLKLLD 335 (1035)
Q Consensus 257 f~~~~~Lr~L~Ls~~~i~~lp~~i~~L~~Lr~L~L~~~~l~~l~~i~~L~~L~~L~L~~~~l~~lp~~-i~~L~~L~~L~ 335 (1035)
|.++.+||.|||++|.|+.+|..+..+.+|++|++++|.++.++.+..+++|++|++++|.++.+|.. +..+++|++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~~i~~~~~~l~~L~~L~Ls~N~i~~l~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~ 93 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 93 (162)
T ss_dssp EECTTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEECCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred ccCcCcCcEEECCCCCCCccCccccccccCCEEECCCCCCCccCCcccCcchhhhhcccccccCCCccccccccccccce
Confidence 45777889999999999988877778889999999999988888888999999999999999988766 46789999999
Q ss_pred ccCCccccccCh-hhhcCCCCCcEEEccCCccceeeccccccccccCHHhhcCCCCCCEEEE
Q 040774 336 LSNCSKLKVIAP-NVLSNLSQLEELYMANCSIEWEVLGLSIERSNASLVELKNLSRLTTLEI 396 (1035)
Q Consensus 336 l~~~~~l~~lp~-~~l~~L~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~~L~l 396 (1035)
+++|. +..++. ..+..+++|++|++++|.+... .......+..+++|+.|+-
T Consensus 94 L~~N~-i~~~~~l~~l~~l~~L~~L~l~~N~i~~~--------~~~r~~~i~~lp~L~~LD~ 146 (162)
T d1a9na_ 94 LTNNS-LVELGDLDPLASLKSLTYLCILRNPVTNK--------KHYRLYVIYKVPQVRVLDF 146 (162)
T ss_dssp CCSCC-CCCGGGGGGGGGCTTCCEEECCSSGGGGS--------TTHHHHHHHHCTTCSEETT
T ss_pred ecccc-ccccccccccccccccchhhcCCCccccc--------cchHHHHHHHCCCcCeeCC
Confidence 99987 777654 3477889999999999887610 0111234677888888763
No 21
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.43 E-value=3.6e-13 Score=120.35 Aligned_cols=101 Identities=26% Similarity=0.305 Sum_probs=71.5
Q ss_pred cEEEccCCcCccCcccccCCCCCcEEEcCCCCCCCc-ccccCCCCCcEEecccCcCCcchHhhccCCcCCEEcccCCccc
Q 040774 264 KVLDFTRMRLLSLPSSIHLLTDLRTLCLDSCQLEDI-RVIGELRKLEILSLQASAIEQLPMEIGQLTQLKLLDLSNCSKL 342 (1035)
Q Consensus 264 r~L~Ls~~~i~~lp~~i~~L~~Lr~L~L~~~~l~~l-~~i~~L~~L~~L~L~~~~l~~lp~~i~~L~~L~~L~l~~~~~l 342 (1035)
|+||+++|.++.++. +..+++|++|++++|.++.+ +.++.+++|++|++++|.++.+| +++.+++|++|++++|. +
T Consensus 1 R~L~Ls~n~l~~l~~-l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~i~~l~-~~~~l~~L~~L~l~~N~-i 77 (124)
T d1dcea3 1 RVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD-GVANLPRLQELLLCNNR-L 77 (124)
T ss_dssp SEEECTTSCCSSCCC-GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCSSC-C
T ss_pred CEEEcCCCCCCCCcc-cccCCCCCEEECCCCccCcchhhhhhhhcccccccccccccccC-ccccccccCeEECCCCc-c
Confidence 567777777777653 67777777777777777766 55777777777777777777775 37777777777777776 6
Q ss_pred cccCh-hhhcCCCCCcEEEccCCccc
Q 040774 343 KVIAP-NVLSNLSQLEELYMANCSIE 367 (1035)
Q Consensus 343 ~~lp~-~~l~~L~~L~~L~l~~~~~~ 367 (1035)
..++. ..++++++|++|++++|.+.
T Consensus 78 ~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 78 QQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp CSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred CCCCCchhhcCCCCCCEEECCCCcCC
Confidence 66553 33667777777777777765
No 22
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.39 E-value=7.3e-13 Score=118.32 Aligned_cols=117 Identities=20% Similarity=0.218 Sum_probs=92.0
Q ss_pred ceeeccCCCCCCCCCChhhhcCCCCccEEEccCCcCccCcccccCCCCCcEEEcCCCCCCCcccccCCCCCcEEecccCc
Q 040774 238 EFFYNFAPNNSPLQIPDNIFIGMPKLKVLDFTRMRLLSLPSSIHLLTDLRTLCLDSCQLEDIRVIGELRKLEILSLQASA 317 (1035)
Q Consensus 238 r~L~l~~~~~~~~~i~~~~f~~~~~Lr~L~Ls~~~i~~lp~~i~~L~~Lr~L~L~~~~l~~l~~i~~L~~L~~L~L~~~~ 317 (1035)
|+|++++ +....++. +.++++|++|++++|.++.+|+.++.+++|++|++++|.++.++.++++++|++|++++|+
T Consensus 1 R~L~Ls~--n~l~~l~~--l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~i~~l~~~~~l~~L~~L~l~~N~ 76 (124)
T d1dcea3 1 RVLHLAH--KDLTVLCH--LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDGVANLPRLQELLLCNNR 76 (124)
T ss_dssp SEEECTT--SCCSSCCC--GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCGGGTTCSSCCEEECCSSC
T ss_pred CEEEcCC--CCCCCCcc--cccCCCCCEEECCCCccCcchhhhhhhhcccccccccccccccCccccccccCeEECCCCc
Confidence 4556665 44455553 5788899999999999999988899999999999999999988889999999999999999
Q ss_pred CCcch--HhhccCCcCCEEcccCCccccccC---hhhhcCCCCCcEE
Q 040774 318 IEQLP--MEIGQLTQLKLLDLSNCSKLKVIA---PNVLSNLSQLEEL 359 (1035)
Q Consensus 318 l~~lp--~~i~~L~~L~~L~l~~~~~l~~lp---~~~l~~L~~L~~L 359 (1035)
++.+| ..++.+++|++|++++|. +...+ ...+..+++|+.|
T Consensus 77 i~~~~~~~~l~~~~~L~~L~l~~N~-i~~~~~~~~~l~~~lp~L~~L 122 (124)
T d1dcea3 77 LQQSAAIQPLVSCPRLVLLNLQGNS-LCQEEGIQERLAEMLPSVSSI 122 (124)
T ss_dssp CCSSSTTGGGGGCTTCCEEECTTSG-GGGSSSCTTHHHHHCTTCSEE
T ss_pred cCCCCCchhhcCCCCCCEEECCCCc-CCcCccHHHHHHHHCcCcceE
Confidence 98776 357889999999999987 54433 3334446666655
No 23
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33 E-value=4.5e-13 Score=126.28 Aligned_cols=128 Identities=18% Similarity=0.158 Sum_probs=98.1
Q ss_pred CCCCCCCCcceeeccCCCCCCCCCChhhhcCCCCccEEEccCCcCccCcccccCCCCCcEEEcCCCCCCCc--ccccCCC
Q 040774 229 PQGWECPQLEFFYNFAPNNSPLQIPDNIFIGMPKLKVLDFTRMRLLSLPSSIHLLTDLRTLCLDSCQLEDI--RVIGELR 306 (1035)
Q Consensus 229 ~~~~~~~~Lr~L~l~~~~~~~~~i~~~~f~~~~~Lr~L~Ls~~~i~~lp~~i~~L~~Lr~L~L~~~~l~~l--~~i~~L~ 306 (1035)
+....+.++|.|++++ +.+..++ ..+..+++|++|++++|.+++++ .+..+++|++|++++|.++.+ ..+..++
T Consensus 12 ~~~~n~~~lr~L~L~~--n~I~~i~-~~~~~l~~L~~L~Ls~N~i~~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~ 87 (162)
T d1a9na_ 12 AQYTNAVRDRELDLRG--YKIPVIE-NLGATLDQFDAIDFSDNEIRKLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALP 87 (162)
T ss_dssp CEEECTTSCEEEECTT--SCCCSCC-CGGGGTTCCSEEECCSSCCCEEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhccCcCcCcEEECCC--CCCCccC-ccccccccCCEEECCCCCCCccC-CcccCcchhhhhcccccccCCCcccccccc
Confidence 3334556777777776 5666665 34577888999999999888884 588888899999999988876 3356788
Q ss_pred CCcEEecccCcCCcchH--hhccCCcCCEEcccCCccccccCh---hhhcCCCCCcEEEc
Q 040774 307 KLEILSLQASAIEQLPM--EIGQLTQLKLLDLSNCSKLKVIAP---NVLSNLSQLEELYM 361 (1035)
Q Consensus 307 ~L~~L~L~~~~l~~lp~--~i~~L~~L~~L~l~~~~~l~~lp~---~~l~~L~~L~~L~l 361 (1035)
+|++|++++|.++.++. .+..+++|++|++++|. +...|. ..++.+++|+.|+.
T Consensus 88 ~L~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~-i~~~~~~r~~~i~~lp~L~~LD~ 146 (162)
T d1a9na_ 88 DLTELILTNNSLVELGDLDPLASLKSLTYLCILRNP-VTNKKHYRLYVIYKVPQVRVLDF 146 (162)
T ss_dssp TCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSG-GGGSTTHHHHHHHHCTTCSEETT
T ss_pred ccccceeccccccccccccccccccccchhhcCCCc-cccccchHHHHHHHCCCcCeeCC
Confidence 99999999988887764 57888899999999887 676663 34778888988873
No 24
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33 E-value=3.2e-13 Score=141.35 Aligned_cols=90 Identities=16% Similarity=0.144 Sum_probs=49.1
Q ss_pred CCcccEEEEccCCCcccccChhHHhhcCCCcEEEEeccccccccccccccccCCCceeccccCeeecccCCcccccccCC
Q 040774 628 VQNLTRLILEDCRKLKYVFSYSIAKRLGQLQHLEICRCPHLEEVVGKESGVEADPSFVFPRLTILKLHYLPELRAFYPGV 707 (1035)
Q Consensus 628 ~~~L~~L~l~~c~~l~~l~~~~~~~~l~~L~~L~i~~c~~l~~l~~~~~~~~~~~~~~~~~L~~L~L~~~~~L~~~~~~~ 707 (1035)
..+|++|++++| .+..-....++..+++|++|.+++|+.-..... ....+++|++|++++|..+++.....
T Consensus 45 ~~~L~~LdLs~~-~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~--------~l~~~~~L~~L~Ls~c~~itd~~l~~ 115 (284)
T d2astb2 45 PFRVQHMDLSNS-VIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVN--------TLAKNSNLVRLNLSGCSGFSEFALQT 115 (284)
T ss_dssp CBCCCEEECTTC-EECHHHHHHHHTTBCCCSEEECTTCBCCHHHHH--------HHTTCTTCSEEECTTCBSCCHHHHHH
T ss_pred CCCCCEEECCCC-ccCHHHHHHHHHhCCCcccccccccCCCcHHHH--------HHhcCCCCcCccccccccccccccch
Confidence 347888888888 343322233467788888888888852111110 11234566666666666655432211
Q ss_pred cccCCCCcceeeeecCCcc
Q 040774 708 HTLECPMLTKLEVYICDKL 726 (1035)
Q Consensus 708 ~~~~~~~L~~L~i~~c~~l 726 (1035)
....+++|++|++++|..+
T Consensus 116 l~~~~~~L~~L~ls~c~~~ 134 (284)
T d2astb2 116 LLSSCSRLDELNLSWCFDF 134 (284)
T ss_dssp HHHHCTTCCEEECCCCTTC
T ss_pred hhHHHHhcccccccccccc
Confidence 1223556666666666544
No 25
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.31 E-value=1.1e-12 Score=128.50 Aligned_cols=106 Identities=22% Similarity=0.244 Sum_probs=59.3
Q ss_pred CCccEEEccCCcCcc-C-cccccCCCCCcEEEcCCCCCCCc--ccccCCCCCcEEecccCcCCcchHh-hccCCcCCEEc
Q 040774 261 PKLKVLDFTRMRLLS-L-PSSIHLLTDLRTLCLDSCQLEDI--RVIGELRKLEILSLQASAIEQLPME-IGQLTQLKLLD 335 (1035)
Q Consensus 261 ~~Lr~L~Ls~~~i~~-l-p~~i~~L~~Lr~L~L~~~~l~~l--~~i~~L~~L~~L~L~~~~l~~lp~~-i~~L~~L~~L~ 335 (1035)
.++++|+|++|.|+. + +..|..+++|++|++++|.+..+ ..+..+++|++|++++|+++.+|.. |.++++|++|+
T Consensus 29 ~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~ 108 (192)
T d1w8aa_ 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLN 108 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEE
T ss_pred CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccccccccCHHHHhCCCcccccc
Confidence 345555555555543 2 23445555555555555555543 4555555666666666655555433 45566666666
Q ss_pred ccCCccccccChhhhcCCCCCcEEEccCCccc
Q 040774 336 LSNCSKLKVIAPNVLSNLSQLEELYMANCSIE 367 (1035)
Q Consensus 336 l~~~~~l~~lp~~~l~~L~~L~~L~l~~~~~~ 367 (1035)
|++|. ++.+|++.+..+++|++|++++|.+.
T Consensus 109 L~~N~-l~~i~~~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 109 LYDNQ-ISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CCSSC-CCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred cCCcc-ccccCHHHhcCCcccccccccccccc
Confidence 66655 55555555556666666666655543
No 26
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.31 E-value=3.4e-12 Score=124.81 Aligned_cols=125 Identities=21% Similarity=0.274 Sum_probs=77.4
Q ss_pred cEEEccCCcCccCcccccCCCCCcEEEcCCCCCCC-c--ccccCCCCCcEEecccCcCCcch-HhhccCCcCCEEcccCC
Q 040774 264 KVLDFTRMRLLSLPSSIHLLTDLRTLCLDSCQLED-I--RVIGELRKLEILSLQASAIEQLP-MEIGQLTQLKLLDLSNC 339 (1035)
Q Consensus 264 r~L~Ls~~~i~~lp~~i~~L~~Lr~L~L~~~~l~~-l--~~i~~L~~L~~L~L~~~~l~~lp-~~i~~L~~L~~L~l~~~ 339 (1035)
++++.++++++++|..+. .++++|+|++|.|+. + ..|.++++|++|++++|.+..++ ..+..+++|++|++++|
T Consensus 11 ~~v~Cs~~~L~~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N 88 (192)
T d1w8aa_ 11 TTVDCTGRGLKEIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CEEEEeCCCcCccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccc
Confidence 456666666666666553 466666666666653 2 45566666666666666666443 33566666666666666
Q ss_pred ccccccChhhhcCCCCCcEEEccCCccceeeccccccccccCHHhhcCCCCCCEEEEeecCCC
Q 040774 340 SKLKVIAPNVLSNLSQLEELYMANCSIEWEVLGLSIERSNASLVELKNLSRLTTLEINILDAG 402 (1035)
Q Consensus 340 ~~l~~lp~~~l~~L~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~~L~l~~~~~~ 402 (1035)
. ++.+|++.|.++++|++|++++|.+. ......+..+++|++|++++|...
T Consensus 89 ~-l~~l~~~~F~~l~~L~~L~L~~N~l~-----------~i~~~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 89 K-IKEISNKMFLGLHQLKTLNLYDNQIS-----------CVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp C-CCEECSSSSTTCTTCCEEECCSSCCC-----------EECTTSSTTCTTCCEEECTTCCBC
T ss_pred c-ccccCHHHHhCCCcccccccCCcccc-----------ccCHHHhcCCcccccccccccccc
Confidence 5 66666665666666666666666665 223344566666666666666543
No 27
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.30 E-value=8.3e-12 Score=127.57 Aligned_cols=99 Identities=16% Similarity=0.253 Sum_probs=42.4
Q ss_pred EEecCCCCCCCCCCCCCCCcceeeccCCCCCCCCCChhhhcCCCCccEEEccCCcCccC--cccccCCCCCcEEEcCCC-
Q 040774 218 ISLYDNNISEIPQGWECPQLEFFYNFAPNNSPLQIPDNIFIGMPKLKVLDFTRMRLLSL--PSSIHLLTDLRTLCLDSC- 294 (1035)
Q Consensus 218 l~l~~~~~~~l~~~~~~~~Lr~L~l~~~~~~~~~i~~~~f~~~~~Lr~L~Ls~~~i~~l--p~~i~~L~~Lr~L~L~~~- 294 (1035)
+..++..+.++|..+. +++++|++++ +....+|...|.++++|++|++++|.+... +..|..+..+++|.+.++
T Consensus 13 i~c~~~~l~~iP~~l~-~~l~~L~Ls~--n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n 89 (242)
T d1xwdc1 13 FLCQESKVTEIPSDLP-RNAIELRFVL--TKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN 89 (242)
T ss_dssp EEEESCSCSSCCSCSC-SCCSEEEEES--CCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCT
T ss_pred EEEeCCCCCCcCCCCC-CCCCEEECcC--CcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccc
Confidence 3334444444443331 3444454443 334444444444455555555555444332 223444444444444322
Q ss_pred CCCCc--ccccCCCCCcEEecccCcCC
Q 040774 295 QLEDI--RVIGELRKLEILSLQASAIE 319 (1035)
Q Consensus 295 ~l~~l--~~i~~L~~L~~L~L~~~~l~ 319 (1035)
.+..+ ..+.++++|++|+++++.+.
T Consensus 90 ~l~~~~~~~~~~l~~L~~l~l~~~~l~ 116 (242)
T d1xwdc1 90 NLLYINPEAFQNLPNLQYLLISNTGIK 116 (242)
T ss_dssp TCCEECTTSEECCTTCCEEEEESCCCC
T ss_pred cccccccccccccccccccccchhhhc
Confidence 23222 33444444444444444444
No 28
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=1.2e-11 Score=126.45 Aligned_cols=103 Identities=18% Similarity=0.281 Sum_probs=57.2
Q ss_pred ceeeccCCCCCCCCCChhhhcCCCCccEEEccCCcCccCcc-cccCCCCCcEEEcCCCCCCC-c--ccccCCCCCcEEec
Q 040774 238 EFFYNFAPNNSPLQIPDNIFIGMPKLKVLDFTRMRLLSLPS-SIHLLTDLRTLCLDSCQLED-I--RVIGELRKLEILSL 313 (1035)
Q Consensus 238 r~L~l~~~~~~~~~i~~~~f~~~~~Lr~L~Ls~~~i~~lp~-~i~~L~~Lr~L~L~~~~l~~-l--~~i~~L~~L~~L~L 313 (1035)
++++..+ ....++|+.++ +++++||+++|.++.+|. +|.++++|++|++++|.+.. + ..|.++++++++++
T Consensus 11 ~~i~c~~--~~l~~iP~~l~---~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~ 85 (242)
T d1xwdc1 11 RVFLCQE--SKVTEIPSDLP---RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 85 (242)
T ss_dssp SEEEEES--CSCSSCCSCSC---SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEE
T ss_pred CEEEEeC--CCCCCcCCCCC---CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccc
Confidence 3444443 33456665543 356666666666666654 45666666666666666543 2 34556666666665
Q ss_pred cc-CcCCcch-HhhccCCcCCEEcccCCccccccC
Q 040774 314 QA-SAIEQLP-MEIGQLTQLKLLDLSNCSKLKVIA 346 (1035)
Q Consensus 314 ~~-~~l~~lp-~~i~~L~~L~~L~l~~~~~l~~lp 346 (1035)
.. +.+..++ ..+..+++|++|+++++. +...+
T Consensus 86 ~~~n~l~~~~~~~~~~l~~L~~l~l~~~~-l~~~~ 119 (242)
T d1xwdc1 86 EKANNLLYINPEAFQNLPNLQYLLISNTG-IKHLP 119 (242)
T ss_dssp ECCTTCCEECTTSEECCTTCCEEEEESCC-CCSCC
T ss_pred cccccccccccccccccccccccccchhh-hcccc
Confidence 54 3444333 335566666666666654 44443
No 29
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29 E-value=1.8e-13 Score=143.28 Aligned_cols=139 Identities=16% Similarity=0.182 Sum_probs=65.0
Q ss_pred cccccccccccccccCceeeeccCCCcccccccccceEEeecccCcccc--CCCc-ccccCccEEEeccCC-CCcchhhh
Q 040774 843 KLAQIRYLTLEHLNDLKHLWLWEQNSKLNTVFQNLETLSAHFCLNLTNL--MPSS-ASFRCLKELRVCACE-HLMNLVAS 918 (1035)
Q Consensus 843 ~l~~L~~L~l~~c~~L~~L~i~~~~~~~~~~l~~L~~L~i~~C~~l~~l--~~~~-~~~~~L~~L~i~~c~-~L~~l~~~ 918 (1035)
.+++|++|++++|..+++-.+ ......+++|++|++++|.+++.- .... ...++|+.|++++|. .+.+....
T Consensus 93 ~~~~L~~L~Ls~c~~itd~~l----~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~ 168 (284)
T d2astb2 93 KNSNLVRLNLSGCSGFSEFAL----QTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLS 168 (284)
T ss_dssp TCTTCSEEECTTCBSCCHHHH----HHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHH
T ss_pred cCCCCcCcccccccccccccc----chhhHHHHhccccccccccccccccchhhhcccccccchhhhccccccccccccc
Confidence 345555555555555443000 011234555555665555554321 1111 113456666665543 34433223
Q ss_pred hhhhcccccceEeeccccccceeeccccccCCCCccccccccccccccccccceeccCCceeeCCccCEEEEecC
Q 040774 919 SAAKNLVQLVRMTVRECNKITELVVASEGDAANDEIIFPKLMFLKLHRLQSLTTFCSANYTFKFPSLFYLSVRNC 993 (1035)
Q Consensus 919 ~~~~~l~~L~~L~i~~c~~l~~l~~~~~~~~~~~~~~l~sL~~L~l~~c~~L~~l~~~~~~~~~~~L~~L~i~~C 993 (1035)
.+..++++|++|++++|+.+++-.+.. ...+++|++|++++|+.+++-..... .++|+|+.|++++|
T Consensus 169 ~l~~~~~~L~~L~L~~~~~itd~~~~~-------l~~~~~L~~L~L~~C~~i~~~~l~~L-~~~~~L~~L~l~~~ 235 (284)
T d2astb2 169 TLVRRCPNLVHLDLSDSVMLKNDCFQE-------FFQLNYLQHLSLSRCYDIIPETLLEL-GEIPTLKTLQVFGI 235 (284)
T ss_dssp HHHHHCTTCSEEECTTCTTCCGGGGGG-------GGGCTTCCEEECTTCTTCCGGGGGGG-GGCTTCCEEECTTS
T ss_pred ccccccccccccccccccCCCchhhhh-------hcccCcCCEEECCCCCCCChHHHHHH-hcCCCCCEEeeeCC
Confidence 344555666666666665554432222 22455666666666665544322221 24566666666665
No 30
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.16 E-value=1.2e-12 Score=128.14 Aligned_cols=141 Identities=21% Similarity=0.262 Sum_probs=103.4
Q ss_pred CCCChhhhcCCCCccEEEccCCcCccCcccccCCCCCcEEEcCCCCCCCccc-ccCCCCCcEEecccCcCCcchHhhccC
Q 040774 250 LQIPDNIFIGMPKLKVLDFTRMRLLSLPSSIHLLTDLRTLCLDSCQLEDIRV-IGELRKLEILSLQASAIEQLPMEIGQL 328 (1035)
Q Consensus 250 ~~i~~~~f~~~~~Lr~L~Ls~~~i~~lp~~i~~L~~Lr~L~L~~~~l~~l~~-i~~L~~L~~L~L~~~~l~~lp~~i~~L 328 (1035)
..++.+ |..+++|++|+|++|.|+.++ .+..+++|++|++++|.++.++. +..+.+|++|++++|.++.++ .+..+
T Consensus 38 ~~l~~s-l~~L~~L~~L~Ls~n~I~~i~-~l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~N~i~~l~-~~~~l 114 (198)
T d1m9la_ 38 EKMDAT-LSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIASLS-GIEKL 114 (198)
T ss_dssp CCCHHH-HHHTTTCCEEECSEEEESCCC-CHHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEECSEEECCCHH-HHHHH
T ss_pred hhhhhH-HhcccccceeECcccCCCCcc-cccCCccccChhhcccccccccccccccccccccccccccccccc-ccccc
Confidence 334443 578999999999999999886 58899999999999999888744 445568999999999998875 48889
Q ss_pred CcCCEEcccCCccccccCh-hhhcCCCCCcEEEccCCccceeeccccccccccCHHhhcCCCCCCEEE
Q 040774 329 TQLKLLDLSNCSKLKVIAP-NVLSNLSQLEELYMANCSIEWEVLGLSIERSNASLVELKNLSRLTTLE 395 (1035)
Q Consensus 329 ~~L~~L~l~~~~~l~~lp~-~~l~~L~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~~L~ 395 (1035)
++|++|++++|. ++.++. ..++.+++|++|++++|.+......... ........+..+++|+.|+
T Consensus 115 ~~L~~L~L~~N~-i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~-~~~~r~~vi~~lp~L~~LD 180 (198)
T d1m9la_ 115 VNLRVLYMSNNK-ITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNA-TSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp HHSSEEEESEEE-CCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTT-HHHHHHHHHHHCSSCCEES
T ss_pred ccccccccccch-hccccccccccCCCccceeecCCCccccCcccccc-hhhHHHHHHHHCCCcCEeC
Confidence 999999999987 777753 3478899999999999987521110000 0000112266788888876
No 31
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.05 E-value=6e-12 Score=122.99 Aligned_cols=127 Identities=20% Similarity=0.282 Sum_probs=107.9
Q ss_pred CccEEEccCC--cCccCcccccCCCCCcEEEcCCCCCCCcccccCCCCCcEEecccCcCCcchHhhccCCcCCEEcccCC
Q 040774 262 KLKVLDFTRM--RLLSLPSSIHLLTDLRTLCLDSCQLEDIRVIGELRKLEILSLQASAIEQLPMEIGQLTQLKLLDLSNC 339 (1035)
Q Consensus 262 ~Lr~L~Ls~~--~i~~lp~~i~~L~~Lr~L~L~~~~l~~l~~i~~L~~L~~L~L~~~~l~~lp~~i~~L~~L~~L~l~~~ 339 (1035)
.++.+++++. .+..+|.++..+++|++|+|++|.|+.++.++++++|++|++++|.++.+|.....+.+|++|++++|
T Consensus 24 ~~~~~~l~~~~~~i~~l~~sl~~L~~L~~L~Ls~n~I~~i~~l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~N 103 (198)
T d1m9la_ 24 EAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKISSLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYN 103 (198)
T ss_dssp TCSCEECCBCCTTCCCCHHHHHHTTTCCEEECSEEEESCCCCHHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEECSEE
T ss_pred ccceeeeecccCchhhhhhHHhcccccceeECcccCCCCcccccCCccccChhhcccccccccccccccccccccccccc
Confidence 3455666654 46678899999999999999999999998899999999999999999999877777889999999999
Q ss_pred ccccccChhhhcCCCCCcEEEccCCccceeeccccccccccCHHhhcCCCCCCEEEEeecCC
Q 040774 340 SKLKVIAPNVLSNLSQLEELYMANCSIEWEVLGLSIERSNASLVELKNLSRLTTLEINILDA 401 (1035)
Q Consensus 340 ~~l~~lp~~~l~~L~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~~L~l~~~~~ 401 (1035)
. ++.++. +.++++|++|++++|.+. ....+..++.+++|+.|++++|+.
T Consensus 104 ~-i~~l~~--~~~l~~L~~L~L~~N~i~----------~~~~~~~l~~l~~L~~L~L~~N~l 152 (198)
T d1m9la_ 104 Q-IASLSG--IEKLVNLRVLYMSNNKIT----------NWGEIDKLAALDKLEDLLLAGNPL 152 (198)
T ss_dssp E-CCCHHH--HHHHHHSSEEEESEEECC----------CHHHHHHHTTTTTCSEEEECSSHH
T ss_pred c-cccccc--ccccccccccccccchhc----------cccccccccCCCccceeecCCCcc
Confidence 7 888754 889999999999999886 012345789999999999999863
No 32
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.89 E-value=3.1e-11 Score=136.59 Aligned_cols=104 Identities=19% Similarity=0.203 Sum_probs=52.9
Q ss_pred CcceeeccCCCCCCCCCChhhhcCCCCccEEEccCCcCc-----cCcccccCCCCCcEEEcCCCCCCCc------cccc-
Q 040774 236 QLEFFYNFAPNNSPLQIPDNIFIGMPKLKVLDFTRMRLL-----SLPSSIHLLTDLRTLCLDSCQLEDI------RVIG- 303 (1035)
Q Consensus 236 ~Lr~L~l~~~~~~~~~i~~~~f~~~~~Lr~L~Ls~~~i~-----~lp~~i~~L~~Lr~L~L~~~~l~~l------~~i~- 303 (1035)
+|++|++++ ++....--..++..++++++|+|++|.++ .++..+..+++|++|+|++|.++.. ..+.
T Consensus 3 ~l~~ld~~~-~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~ 81 (460)
T d1z7xw1 3 DIQSLDIQC-EELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 81 (460)
T ss_dssp EEEEEEEES-CCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred CCCEEEeeC-CcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhc
Confidence 455555554 22221111233455666666666666654 2344455666666666666665421 1121
Q ss_pred CCCCCcEEecccCcCCc-----chHhhccCCcCCEEcccCCc
Q 040774 304 ELRKLEILSLQASAIEQ-----LPMEIGQLTQLKLLDLSNCS 340 (1035)
Q Consensus 304 ~L~~L~~L~L~~~~l~~-----lp~~i~~L~~L~~L~l~~~~ 340 (1035)
...+|++|++++|.++. ++..+..+++|++|++++|.
T Consensus 82 ~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~ 123 (460)
T d1z7xw1 82 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNL 123 (460)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSB
T ss_pred CCCCCCEEECCCCCccccccccccchhhcccccccccccccc
Confidence 12356666666665542 33445556666666666654
No 33
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.87 E-value=3.6e-09 Score=98.23 Aligned_cols=105 Identities=20% Similarity=0.211 Sum_probs=81.3
Q ss_pred CCccEEEccCCcCccCcccccCCCCCcEEEcCCCC-CCCc--ccccCCCCCcEEecccCcCCcch-HhhccCCcCCEEcc
Q 040774 261 PKLKVLDFTRMRLLSLPSSIHLLTDLRTLCLDSCQ-LEDI--RVIGELRKLEILSLQASAIEQLP-MEIGQLTQLKLLDL 336 (1035)
Q Consensus 261 ~~Lr~L~Ls~~~i~~lp~~i~~L~~Lr~L~L~~~~-l~~l--~~i~~L~~L~~L~L~~~~l~~lp-~~i~~L~~L~~L~l 336 (1035)
.....++.+++.+.+.|..+..+++|++|++++++ ++.+ ..|.++.+|++|++++|+|+.++ ..+..+++|++|+|
T Consensus 8 ~~~~~l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 87 (156)
T d2ifga3 8 HGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNL 87 (156)
T ss_dssp SSSSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEEC
T ss_pred CCCCeEEecCCCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceec
Confidence 34455777788887888888888888888887664 7766 56888888888888888888875 44788888888888
Q ss_pred cCCccccccChhhhcCCCCCcEEEccCCccc
Q 040774 337 SNCSKLKVIAPNVLSNLSQLEELYMANCSIE 367 (1035)
Q Consensus 337 ~~~~~l~~lp~~~l~~L~~L~~L~l~~~~~~ 367 (1035)
++|. ++.+|.+.+.. .+|++|++++|.+.
T Consensus 88 s~N~-l~~l~~~~~~~-~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 88 SFNA-LESLSWKTVQG-LSLQELVLSGNPLH 116 (156)
T ss_dssp CSSC-CSCCCSTTTCS-CCCCEEECCSSCCC
T ss_pred cCCC-CcccChhhhcc-ccccccccCCCccc
Confidence 8887 88888875544 46888888888764
No 34
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.86 E-value=4.6e-11 Score=135.15 Aligned_cols=105 Identities=22% Similarity=0.348 Sum_probs=76.3
Q ss_pred CccEEEccCCcCcc--CcccccCCCCCcEEEcCCCCCCC-----c-ccccCCCCCcEEecccCcCCc-----chHhhc-c
Q 040774 262 KLKVLDFTRMRLLS--LPSSIHLLTDLRTLCLDSCQLED-----I-RVIGELRKLEILSLQASAIEQ-----LPMEIG-Q 327 (1035)
Q Consensus 262 ~Lr~L~Ls~~~i~~--lp~~i~~L~~Lr~L~L~~~~l~~-----l-~~i~~L~~L~~L~L~~~~l~~-----lp~~i~-~ 327 (1035)
+|++||+++++++. +.+-+..++++|+|+|++|.++. + ..+..+++|++|||++|.++. +...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 58899999999974 34455678899999999998763 2 456788899999999988762 222222 2
Q ss_pred CCcCCEEcccCCccccccCh----hhhcCCCCCcEEEccCCccc
Q 040774 328 LTQLKLLDLSNCSKLKVIAP----NVLSNLSQLEELYMANCSIE 367 (1035)
Q Consensus 328 L~~L~~L~l~~~~~l~~lp~----~~l~~L~~L~~L~l~~~~~~ 367 (1035)
..+|++|++++|. ++.... ..+..+++|++|++++|.+.
T Consensus 83 ~~~L~~L~L~~n~-it~~~~~~l~~~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 83 SCKIQKLSLQNCC-LTGAGCGVLSSTLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp TCCCCEEECTTSC-CBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred CCCCCEEECCCCC-ccccccccccchhhccccccccccccccch
Confidence 3579999999886 654321 22667888999999888775
No 35
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.78 E-value=1e-08 Score=95.05 Aligned_cols=83 Identities=25% Similarity=0.221 Sum_probs=44.0
Q ss_pred cCCCCccEEEccCC-cCccCc-ccccCCCCCcEEEcCCCCCCCc--ccccCCCCCcEEecccCcCCcchHhhccCCcCCE
Q 040774 258 IGMPKLKVLDFTRM-RLLSLP-SSIHLLTDLRTLCLDSCQLEDI--RVIGELRKLEILSLQASAIEQLPMEIGQLTQLKL 333 (1035)
Q Consensus 258 ~~~~~Lr~L~Ls~~-~i~~lp-~~i~~L~~Lr~L~L~~~~l~~l--~~i~~L~~L~~L~L~~~~l~~lp~~i~~L~~L~~ 333 (1035)
..+++|+.|+++++ .++.++ .+|.++++|++|++++|.++.+ ..|..+++|++|+|++|+++.+|.++....+|++
T Consensus 28 ~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~~~l~~ 107 (156)
T d2ifga3 28 PGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQE 107 (156)
T ss_dssp CSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCCCCE
T ss_pred cCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCcccChhhhccccccc
Confidence 34555555555433 355442 3455555555555555555544 3455555555555555555555555444445666
Q ss_pred EcccCCc
Q 040774 334 LDLSNCS 340 (1035)
Q Consensus 334 L~l~~~~ 340 (1035)
|++++|.
T Consensus 108 L~L~~Np 114 (156)
T d2ifga3 108 LVLSGNP 114 (156)
T ss_dssp EECCSSC
T ss_pred cccCCCc
Confidence 6665554
No 36
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.47 E-value=2.2e-08 Score=107.47 Aligned_cols=179 Identities=17% Similarity=0.133 Sum_probs=112.7
Q ss_pred CCccEEEecCCCCCC-----CCCCC-CCCCcceeeccCCCCCCCCC----C------hhhhcCCCCccEEEccCCcCcc-
Q 040774 213 KKCSRISLYDNNISE-----IPQGW-ECPQLEFFYNFAPNNSPLQI----P------DNIFIGMPKLKVLDFTRMRLLS- 275 (1035)
Q Consensus 213 ~~~~~l~l~~~~~~~-----l~~~~-~~~~Lr~L~l~~~~~~~~~i----~------~~~f~~~~~Lr~L~Ls~~~i~~- 275 (1035)
..++.+++++|.+.. +...+ ..++|+.+.+.+ ...... + ...+..+++|+.|++++|.+..
T Consensus 31 ~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~--~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~ 108 (344)
T d2ca6a1 31 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSD--IFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPT 108 (344)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCS--CCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTT
T ss_pred CCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCC--CcccccccccchHHHHHHHHHhhCCCcccccccccccccc
Confidence 467778888876642 22222 567888888775 211111 1 1224567888888888887763
Q ss_pred ----CcccccCCCCCcEEEcCCCCCCCc------c---------cccCCCCCcEEecccCcCC-----cchHhhccCCcC
Q 040774 276 ----LPSSIHLLTDLRTLCLDSCQLEDI------R---------VIGELRKLEILSLQASAIE-----QLPMEIGQLTQL 331 (1035)
Q Consensus 276 ----lp~~i~~L~~Lr~L~L~~~~l~~l------~---------~i~~L~~L~~L~L~~~~l~-----~lp~~i~~L~~L 331 (1035)
+...+...++|++|++++|.+..- . .......|+.+++++|.+. .+...+....+|
T Consensus 109 ~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L 188 (344)
T d2ca6a1 109 AQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLL 188 (344)
T ss_dssp THHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTC
T ss_pred cccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhhhhhh
Confidence 445566778888888888876421 1 1234567888888887765 234456677888
Q ss_pred CEEcccCCcccccc-----ChhhhcCCCCCcEEEccCCccceeeccccccccccCHHhhcCCCCCCEEEEeecCC
Q 040774 332 KLLDLSNCSKLKVI-----APNVLSNLSQLEELYMANCSIEWEVLGLSIERSNASLVELKNLSRLTTLEINILDA 401 (1035)
Q Consensus 332 ~~L~l~~~~~l~~l-----p~~~l~~L~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~~L~l~~~~~ 401 (1035)
++|++++|. +..- ....+...++|++|++++|.+... ........+...++|++|++++|.+
T Consensus 189 ~~L~L~~n~-i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~-------g~~~L~~~l~~~~~L~~L~Ls~n~i 255 (344)
T d2ca6a1 189 HTVKMVQNG-IRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHL-------GSSALAIALKSWPNLRELGLNDCLL 255 (344)
T ss_dssp CEEECCSSC-CCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHH-------HHHHHHHHGGGCTTCCEEECTTCCC
T ss_pred ccccccccc-ccccccccchhhhhcchhhhccccccccccccc-------ccccccccccccccchhhhhhcCcc
Confidence 888888876 4321 112256678888888888876510 0012234567778888888877754
No 37
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.23 E-value=2.5e-07 Score=99.00 Aligned_cols=180 Identities=19% Similarity=0.223 Sum_probs=117.9
Q ss_pred CCccEEEecCCCCCCCC-----CCC-CCCCcceeeccCCCCCCCC-----CCh--------hhhcCCCCccEEEccCCcC
Q 040774 213 KKCSRISLYDNNISEIP-----QGW-ECPQLEFFYNFAPNNSPLQ-----IPD--------NIFIGMPKLKVLDFTRMRL 273 (1035)
Q Consensus 213 ~~~~~l~l~~~~~~~l~-----~~~-~~~~Lr~L~l~~~~~~~~~-----i~~--------~~f~~~~~Lr~L~Ls~~~i 273 (1035)
..++.+++.+|.+.... ..+ ..++|+.|.+++ +. ... +.. ......+.|+.+++++|.+
T Consensus 93 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~-n~-l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i 170 (344)
T d2ca6a1 93 PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHN-NG-LGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRL 170 (344)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCS-SC-CHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCC
T ss_pred CCcccccccccccccccccchhhhhcccccchheeccc-cc-ccccccccccccccccccccccccCcccceeecccccc
Confidence 36778888888776421 111 567888888876 22 211 000 0123567888999988877
Q ss_pred c-----cCcccccCCCCCcEEEcCCCCCCC------c-ccccCCCCCcEEecccCcCCc-----chHhhccCCcCCEEcc
Q 040774 274 L-----SLPSSIHLLTDLRTLCLDSCQLED------I-RVIGELRKLEILSLQASAIEQ-----LPMEIGQLTQLKLLDL 336 (1035)
Q Consensus 274 ~-----~lp~~i~~L~~Lr~L~L~~~~l~~------l-~~i~~L~~L~~L~L~~~~l~~-----lp~~i~~L~~L~~L~l 336 (1035)
. .+...+....+|++|++++|.+.. + ..+...++|++|++++|.+.. +...+...++|++|++
T Consensus 171 ~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~L 250 (344)
T d2ca6a1 171 ENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGL 250 (344)
T ss_dssp TGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEEC
T ss_pred cccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhh
Confidence 5 245556777889999999988763 2 457788889999999887752 4556778889999999
Q ss_pred cCCccccccChhh----hcC--CCCCcEEEccCCccceeeccccccccccCHHhhc-CCCCCCEEEEeecCCC
Q 040774 337 SNCSKLKVIAPNV----LSN--LSQLEELYMANCSIEWEVLGLSIERSNASLVELK-NLSRLTTLEINILDAG 402 (1035)
Q Consensus 337 ~~~~~l~~lp~~~----l~~--L~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~l~-~L~~L~~L~l~~~~~~ 402 (1035)
++|. ++...... +.+ ...|++|++++|.+... ........+. +.++|+.|++++|...
T Consensus 251 s~n~-i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~-------~~~~l~~~l~~~~~~L~~L~l~~N~~~ 315 (344)
T d2ca6a1 251 NDCL-LSARGAAAVVDAFSKLENIGLQTLRLQYNEIELD-------AVRTLKTVIDEKMPDLLFLELNGNRFS 315 (344)
T ss_dssp TTCC-CCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHH-------HHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred hcCc-cCchhhHHHHHHhhhccCCCCCEEECCCCcCChH-------HHHHHHHHHHccCCCCCEEECCCCcCC
Confidence 9886 54432211 233 35789999999887510 0011223343 5778999998888754
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.68 E-value=1.7e-06 Score=80.30 Aligned_cols=42 Identities=26% Similarity=0.392 Sum_probs=17.4
Q ss_pred cCCCCccEEEccCCcCccCc---ccccCCCCCcEEEcCCCCCCCc
Q 040774 258 IGMPKLKVLDFTRMRLLSLP---SSIHLLTDLRTLCLDSCQLEDI 299 (1035)
Q Consensus 258 ~~~~~Lr~L~Ls~~~i~~lp---~~i~~L~~Lr~L~L~~~~l~~l 299 (1035)
..++.|++|+|++|+++.++ ..+..+++|++|++++|.++.+
T Consensus 62 ~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l 106 (162)
T d1koha1 62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE 106 (162)
T ss_dssp HHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCG
T ss_pred HhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccc
Confidence 33444444444444444331 2233344444444444444433
No 39
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.65 E-value=1.8e-06 Score=80.22 Aligned_cols=62 Identities=19% Similarity=0.194 Sum_probs=32.7
Q ss_pred cccCCCCCcEEEcCCCCCCCcc----cccCCCCCcEEecccCcCCcchH-hhccCCcCCEEcccCCc
Q 040774 279 SIHLLTDLRTLCLDSCQLEDIR----VIGELRKLEILSLQASAIEQLPM-EIGQLTQLKLLDLSNCS 340 (1035)
Q Consensus 279 ~i~~L~~Lr~L~L~~~~l~~l~----~i~~L~~L~~L~L~~~~l~~lp~-~i~~L~~L~~L~l~~~~ 340 (1035)
.+..+++|++|+|++|+++.++ .+..+++|++|++++|.++.+++ ......+|+.|++++|.
T Consensus 60 ~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Np 126 (162)
T d1koha1 60 IEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNS 126 (162)
T ss_dssp HHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTST
T ss_pred HHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCC
Confidence 3345566666666666665442 23445666666666666655543 12223345555555554
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.86 E-value=0.00086 Score=61.75 Aligned_cols=83 Identities=16% Similarity=0.191 Sum_probs=45.9
Q ss_pred cCCCCccEEEccCC-cCc-----cCcccccCCCCCcEEEcCCCCCCC-----c-ccccCCCCCcEEecccCcCCc-----
Q 040774 258 IGMPKLKVLDFTRM-RLL-----SLPSSIHLLTDLRTLCLDSCQLED-----I-RVIGELRKLEILSLQASAIEQ----- 320 (1035)
Q Consensus 258 ~~~~~Lr~L~Ls~~-~i~-----~lp~~i~~L~~Lr~L~L~~~~l~~-----l-~~i~~L~~L~~L~L~~~~l~~----- 320 (1035)
.+.++|+.|+|+++ .+. .+-..+...++|++|++++|.+.. + ..+...+.|++|++++|.+..
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~ 91 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 91 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHH
Confidence 34566777777653 343 233445566667777777776541 2 344455666666666666552
Q ss_pred chHhhccCCcCCEEcccCCc
Q 040774 321 LPMEIGQLTQLKLLDLSNCS 340 (1035)
Q Consensus 321 lp~~i~~L~~L~~L~l~~~~ 340 (1035)
+-..+..-+.|++|+++++.
T Consensus 92 l~~aL~~n~sL~~L~l~~n~ 111 (167)
T d1pgva_ 92 LLRSTLVTQSIVEFKADNQR 111 (167)
T ss_dssp HHHHTTTTCCCSEEECCCCS
T ss_pred HHHHHHhCCcCCEEECCCCc
Confidence 22234444556666665543
No 41
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.53 E-value=0.0011 Score=61.11 Aligned_cols=104 Identities=13% Similarity=0.038 Sum_probs=70.2
Q ss_pred CCcceeeccCCCCCCC-CC---ChhhhcCCCCccEEEccCCcCc-----cCcccccCCCCCcEEEcCCCCCCC-----c-
Q 040774 235 PQLEFFYNFAPNNSPL-QI---PDNIFIGMPKLKVLDFTRMRLL-----SLPSSIHLLTDLRTLCLDSCQLED-----I- 299 (1035)
Q Consensus 235 ~~Lr~L~l~~~~~~~~-~i---~~~~f~~~~~Lr~L~Ls~~~i~-----~lp~~i~~L~~Lr~L~L~~~~l~~-----l- 299 (1035)
++|+.|++++ .+... .- ....+...++|+.|++++|.+. .+.+.+...+.|++|++++|.+.. +
T Consensus 15 ~~L~~L~L~~-~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~ 93 (167)
T d1pgva_ 15 TDLKEVNINN-MKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 93 (167)
T ss_dssp SSCCEEECTT-CCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCcEEEeCC-CCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHH
Confidence 5666777664 12111 10 0123567788999999999886 344566677899999999999873 2
Q ss_pred ccccCCCCCcEEecccCcCCcc--------hHhhccCCcCCEEcccCC
Q 040774 300 RVIGELRKLEILSLQASAIEQL--------PMEIGQLTQLKLLDLSNC 339 (1035)
Q Consensus 300 ~~i~~L~~L~~L~L~~~~l~~l--------p~~i~~L~~L~~L~l~~~ 339 (1035)
..+..-+.|++|+++++.+..+ ...+..-++|+.|+++.+
T Consensus 94 ~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~ 141 (167)
T d1pgva_ 94 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFA 141 (167)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCC
T ss_pred HHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCC
Confidence 5677888999999998865543 333445566777776554
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.16 E-value=0.0025 Score=58.46 Aligned_cols=81 Identities=15% Similarity=0.217 Sum_probs=43.7
Q ss_pred hcCCCCccEEEccC-CcCc-----cCcccccCCCCCcEEEcCCCCCCC-----c-ccccCCCCCcEEecccCcCC-----
Q 040774 257 FIGMPKLKVLDFTR-MRLL-----SLPSSIHLLTDLRTLCLDSCQLED-----I-RVIGELRKLEILSLQASAIE----- 319 (1035)
Q Consensus 257 f~~~~~Lr~L~Ls~-~~i~-----~lp~~i~~L~~Lr~L~L~~~~l~~-----l-~~i~~L~~L~~L~L~~~~l~----- 319 (1035)
..+.+.|+.|++++ +.++ .+-..+...++|+.|++++|.+.. + ..+...++++.++++++.+.
T Consensus 13 ~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~ 92 (166)
T d1io0a_ 13 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 92 (166)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHH
Confidence 34556677777765 3343 233445566667777777766542 2 34455566666666666554
Q ss_pred cchHhhccCCcCCEEccc
Q 040774 320 QLPMEIGQLTQLKLLDLS 337 (1035)
Q Consensus 320 ~lp~~i~~L~~L~~L~l~ 337 (1035)
.+-..+...++|+.+++.
T Consensus 93 ~l~~~l~~~~~L~~l~L~ 110 (166)
T d1io0a_ 93 ALVEALQSNTSLIELRID 110 (166)
T ss_dssp HHHHGGGGCSSCCEEECC
T ss_pred HHHHHHHhCccccEEeec
Confidence 122334445555554443
No 43
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=95.27 E-value=0.0057 Score=55.95 Aligned_cols=84 Identities=12% Similarity=0.145 Sum_probs=62.2
Q ss_pred hcCCCCccEEEccCCcCc-----cCcccccCCCCCcEEEcCCCCCCC-----c-ccccCCCCCcEEecc--cCcCC----
Q 040774 257 FIGMPKLKVLDFTRMRLL-----SLPSSIHLLTDLRTLCLDSCQLED-----I-RVIGELRKLEILSLQ--ASAIE---- 319 (1035)
Q Consensus 257 f~~~~~Lr~L~Ls~~~i~-----~lp~~i~~L~~Lr~L~L~~~~l~~-----l-~~i~~L~~L~~L~L~--~~~l~---- 319 (1035)
+...++|+.|++++|.+. .+-+.+...++++++++++|.+.. + ..+...+.|+.++|+ +|.+.
T Consensus 42 l~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~ 121 (166)
T d1io0a_ 42 LKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVE 121 (166)
T ss_dssp HTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHH
T ss_pred HhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHH
Confidence 467889999999999886 344566778899999999998762 2 677888999876665 45564
Q ss_pred -cchHhhccCCcCCEEcccCCc
Q 040774 320 -QLPMEIGQLTQLKLLDLSNCS 340 (1035)
Q Consensus 320 -~lp~~i~~L~~L~~L~l~~~~ 340 (1035)
.+...+.+.++|++|+++.+.
T Consensus 122 ~~La~~L~~n~~L~~L~l~~~~ 143 (166)
T d1io0a_ 122 MEIANMLEKNTTLLKFGYHFTQ 143 (166)
T ss_dssp HHHHHHHHHCSSCCEEECCCSS
T ss_pred HHHHHHHHhCCCcCEEeCcCCC
Confidence 244556677788888776543
No 44
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=65.70 E-value=3 Score=40.27 Aligned_cols=58 Identities=14% Similarity=0.148 Sum_probs=43.6
Q ss_pred eeEeCCCCCHHHHHHHHHHhhCC-CCCChhhHHHHHHHHHHhCCchhHHHHHHHHHhcCCChh
Q 040774 12 KTIGIDVLSDEEAWTLFKKMAGD-CAENGELKSIATDVAKECGRLPIAIVTLAKALRNKSIVS 73 (1035)
Q Consensus 12 ~~~~l~~L~~~~~~~Lf~~~a~~-~~~~~~l~~~~~~i~~~c~glPla~~~~g~~L~~~~~~~ 73 (1035)
..+.|++++.+|+.+++.+.+.. ....++ .++|.++++|.|..+..+|..+....+.+
T Consensus 201 ~~i~L~~l~~~e~~~~l~~~~~~~~~~~~~----~~~i~~~~~G~P~~L~~~~~~~~~~~~~~ 259 (283)
T d2fnaa2 201 STVELKPFSREEAIEFLRRGFQEADIDFKD----YEVVYEKIGGIPGWLTYFGFIYLDNKNLD 259 (283)
T ss_dssp EEEEECCCCHHHHHHHHHHHHHHHTCCCCC----HHHHHHHHCSCHHHHHHHHHHHHHHCCHH
T ss_pred eEEeeCCCCHHHHHHHHHhhhhhcCCCHHH----HHHHHHHhCCCHHHHHHHHHHHHhcccHH
Confidence 67899999999999999887721 111122 46999999999999999988776543443
No 45
>d1v54e_ a.118.11.1 (E:) Cytochrome c oxidase subunit E {Cow (Bos taurus) [TaxId: 9913]}
Probab=35.41 E-value=49 Score=25.29 Aligned_cols=61 Identities=18% Similarity=0.290 Sum_probs=46.3
Q ss_pred HHHHHHHHhh---C-CCCCChhhHHHHHHHHHHhCCchhHHHHHHHHHhcC-CChhHHHHHHHHhc
Q 040774 23 EAWTLFKKMA---G-DCAENGELKSIATDVAKECGRLPIAIVTLAKALRNK-SIVSAWKEALRQLK 83 (1035)
Q Consensus 23 ~~~~Lf~~~a---~-~~~~~~~l~~~~~~i~~~c~glPla~~~~g~~L~~~-~~~~~W~~~l~~l~ 83 (1035)
|.|++=+..- + +-.+.|....-|-+..++..-.|+|+..+-+.=..- ...+.|..+++.++
T Consensus 21 D~we~rrgmN~l~~~DlVPeP~Ii~aALrAcRRvND~alAVR~lE~vK~K~~~~k~~y~yilqelk 86 (105)
T d1v54e_ 21 DAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAGPHKEIYPYVIQELR 86 (105)
T ss_dssp CHHHHHHHHHHHTTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCTTHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHh
Confidence 5666644332 4 667889999999999999999999999998765443 35678988887653
Done!