BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>040777
MSSSLIPLSLNPPLLSFHLHRTTCSPPLLISFSRASKFPIRATSSSSDHEEIRWLREEQR
WLREEQRWFREEQRWIRERESLLREISELKLQIKALENRNLSDGASVSVSDTISNIAGLL
QMLKEKNMIAERATVAEKEKFEEEEQQKEVVKVLEGEKKKRKALRVGSEGEDVKAMQEEL
LKLGFFSGEEDMEYSSFSTGTERAVKTWQAAMGVTEDGIMTSELLESLYMEHRVEDNDTN
MNADQKGIIQTIPPKEGTNGAPIASITEISEIKQTVVKEGATEVDLSERRVFLLGENRWE
EPSRLAGRGNQDAGSKAKKATTQCLTCRGEGRLMCLECDGTGEPNIEPQFIEWVDEGMKC
PYCEGLGYTICDVCEGKAVV

High Scoring Gene Products

Symbol, full name Information P value
PTAC5
plastid transcriptionally active 5
protein from Arabidopsis thaliana 3.5e-75
MGG_17224
Uncharacterized protein
protein from Magnaporthe oryzae 70-15 9.1e-05
EDA3
embryo sac development arrest 3
protein from Arabidopsis thaliana 0.00020

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  040777
        (380 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2119475 - symbol:PTAC5 "plastid transcriptiona...   758  3.5e-75   1
UNIPROTKB|G4N8Z4 - symbol:MGG_17224 "Uncharacterized prot...   100  9.1e-05   1
TAIR|locus:2044812 - symbol:EDA3 "embryo sac development ...   111  0.00020   1


>TAIR|locus:2119475 [details] [associations]
            symbol:PTAC5 "plastid transcriptionally active 5"
            species:3702 "Arabidopsis thaliana" [GO:0008152 "metabolic process"
            evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
            [GO:0031072 "heat shock protein binding" evidence=IEA] [GO:0051082
            "unfolded protein binding" evidence=IEA] [GO:0009941 "chloroplast
            envelope" evidence=IDA] [GO:0009535 "chloroplast thylakoid
            membrane" evidence=IDA] [GO:0009295 "nucleoid" evidence=IDA]
            [GO:0009508 "plastid chromosome" evidence=IDA] [GO:0009534
            "chloroplast thylakoid" evidence=IDA] InterPro:IPR001305
            InterPro:IPR002477 Pfam:PF01471 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0009941 GO:GO:0008152 GO:GO:0009535
            SUPFAM:SSF47090 Gene3D:2.10.230.10 SUPFAM:SSF57938
            Gene3D:1.10.101.10 GO:GO:0009508 EMBL:BT029541 IPI:IPI00537075
            RefSeq:NP_193103.2 UniGene:At.33352 ProteinModelPortal:A1A6M1
            SMR:A1A6M1 PaxDb:A1A6M1 PRIDE:A1A6M1 EnsemblPlants:AT4G13670.1
            GeneID:827001 KEGG:ath:AT4G13670 TAIR:At4g13670 eggNOG:NOG288829
            HOGENOM:HOG000116609 InParanoid:A1A6M1 OMA:WLREEQR PhylomeDB:A1A6M1
            ProtClustDB:CLSN2690906 Genevestigator:A1A6M1 Uniprot:A1A6M1
        Length = 387

 Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
 Identities = 160/305 (52%), Positives = 204/305 (66%)

Query:    90 KLQIKALENRNLSDGASVSVSDTISNIAGLLQMLKEKNMIAERATVAXXXXXXXXXXXXX 149
             +L+I++LE+RN   G S+   DTISNIA LLQ+LKEKN I+E    A             
Sbjct:    90 QLRIQSLESRNSQLGNSIP--DTISNIAALLQVLKEKNRISESGLSATPMVLESTREQIV 147

Query:   150 XXXXXXXXXXXXXA----------------LRVGSEGEDVKAMQEELLKLGFFSGEEDME 193
                                           L+VGSEG+DV+A+QE LLKLGF+SGEEDME
Sbjct:   148 EEVEEEEKRVIIAEEKVRVSEPVKKIKRRILKVGSEGDDVQALQEALLKLGFYSGEEDME 207

Query:   194 YSSFSTGTERAVKTWQAAMGVTEDGIMTSELLESLYMEHRVEDNDTNMNADQKGIIQTIP 253
             +SSFS+GT  AVKTWQA++GV EDG+MT+ELL+ L+M+   ED +T+     K    T+ 
Sbjct:   208 FSSFSSGTASAVKTWQASLGVREDGVMTAELLQRLFMD---EDVETD-----KDEASTMK 259

Query:   254 PKEGTNGAPIASITEISEIKQTVVKEGAT-EVDLSERRVFLLGENRWEEPSRLAGRGNQD 312
              +E  NGA   S+T++ E KQ++VK+ +  EVD+++ RVFLLGENRWE+PSRL GR    
Sbjct:   260 KEEAGNGAVFTSVTQVPEKKQSIVKDQSDREVDVTQNRVFLLGENRWEDPSRLIGRNKPV 319

Query:   313 AGSKAKKATTQCLTCRGEGRLMCLECDGTGEPNIEPQFIEWVDEGMKCPYCEGLGYTICD 372
               S++    T+C+TCRGEGRLMCLECDGTGEPNIEPQF+EWV E  KCPYCEGLGYT+CD
Sbjct:   320 DRSESTNTKTRCITCRGEGRLMCLECDGTGEPNIEPQFMEWVGEDTKCPYCEGLGYTVCD 379

Query:   373 VCEGK 377
             VC+GK
Sbjct:   380 VCDGK 384


>UNIPROTKB|G4N8Z4 [details] [associations]
            symbol:MGG_17224 "Uncharacterized protein" species:242507
            "Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] EMBL:CM001234
            RefSeq:XP_003717408.1 EnsemblFungi:MGG_17224T0 GeneID:12986522
            KEGG:mgr:MGG_17224 Uniprot:G4N8Z4
        Length = 59

 Score = 100 (40.3 bits), Expect = 9.1e-05, P = 9.1e-05
 Identities = 24/60 (40%), Positives = 30/60 (50%)

Query:   318 KKATTQCLTCRGEGRLMCLECDGTGEPNIEPQFIEWVDEGMKCPYCEGLGYTICDVCEGK 377
             +K T  C +C G G+  CL C GTG  +I   F E    G+ CP+C   G   C  C GK
Sbjct:     3 EKKTETCSSCSGTGQCTCLRCGGTGS-DI---FAEC---GI-CPHCYARGQVPCSACGGK 54


>TAIR|locus:2044812 [details] [associations]
            symbol:EDA3 "embryo sac development arrest 3"
            species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0031072 "heat shock protein binding"
            evidence=IEA] [GO:0051082 "unfolded protein binding" evidence=IEA]
            [GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
            [GO:0009561 "megagametogenesis" evidence=IMP] [GO:0006098
            "pentose-phosphate shunt" evidence=RCA] [GO:0009902 "chloroplast
            relocation" evidence=RCA] [GO:0010027 "thylakoid membrane
            organization" evidence=RCA] [GO:0010304 "PSII associated
            light-harvesting complex II catabolic process" evidence=RCA]
            [GO:0015995 "chlorophyll biosynthetic process" evidence=RCA]
            [GO:0016117 "carotenoid biosynthetic process" evidence=RCA]
            [GO:0019288 "isopentenyl diphosphate biosynthetic process,
            mevalonate-independent pathway" evidence=RCA] [GO:0019684
            "photosynthesis, light reaction" evidence=RCA] [GO:0034660 "ncRNA
            metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
            dephosphorylation" evidence=RCA] [GO:0042793 "transcription from
            plastid promoter" evidence=RCA] InterPro:IPR001305 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0009561 GO:GO:0009535
            Gene3D:2.10.230.10 SUPFAM:SSF57938 EMBL:AC004238 EMBL:AY099664
            EMBL:AY128851 IPI:IPI00534099 PIR:T00468 RefSeq:NP_001078004.1
            RefSeq:NP_181032.1 UniGene:At.27661 ProteinModelPortal:O64750
            SMR:O64750 STRING:O64750 PaxDb:O64750 PRIDE:O64750
            EnsemblPlants:AT2G34860.1 EnsemblPlants:AT2G34860.2 GeneID:818051
            KEGG:ath:AT2G34860 TAIR:At2g34860 eggNOG:NOG321647
            HOGENOM:HOG000012828 InParanoid:O64750 OMA:MTACVCA PhylomeDB:O64750
            ProtClustDB:CLSN2683664 ArrayExpress:O64750 Genevestigator:O64750
            Uniprot:O64750
        Length = 186

 Score = 111 (44.1 bits), Expect = 0.00020, P = 0.00020
 Identities = 24/67 (35%), Positives = 34/67 (50%)

Query:   311 QDAGSKAKKATTQCLTCRGEGRLMCLECDGTGE-PNIEPQFIEWVDEGMKCPYCEGLGYT 369
             Q A +  KK    C  C+G G ++C  C GTG+   +  +  + V E  +CP C G G  
Sbjct:    89 QSAAALDKKPGGSCRNCQGSGAVLCDMCGGTGKWKALNRKRAKDVYEFTECPNCYGRGKL 148

Query:   370 ICDVCEG 376
             +C VC G
Sbjct:   149 VCPVCLG 155


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.130   0.374    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      380       299   0.00095  115 3  11 23  0.45    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  213 KB (2118 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.87u 0.13s 24.00t   Elapsed:  00:00:01
  Total cpu time:  23.87u 0.13s 24.00t   Elapsed:  00:00:01
  Start:  Sat May 11 11:50:15 2013   End:  Sat May 11 11:50:16 2013

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