BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040777
(380 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0A3V0|SLEB_BACCR Spore cortex-lytic enzyme OS=Bacillus cereus (strain ATCC 14579 /
DSM 31) GN=sleB PE=1 SV=1
Length = 259
Score = 37.4 bits (85), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 10/149 (6%)
Query: 157 EKKKRKALRVGSEGEDVKAMQEELLKLGFFSGEEDMEYSSFSTGTERAVKTWQAAMGVTE 216
E + ++ G+ GEDV +Q L GF++G+ D F GT A++ +Q G+
Sbjct: 31 EAFSNQVIQRGASGEDVIELQSRLKYNGFYTGKVD---GVFGWGTYWALRNFQEKFGLPV 87
Query: 217 DGIMTSE----LLESLYMEHRVEDNDTNMNADQKGII--QTIPPK-EGTNGAPIASITEI 269
DG+ ++ L+++ + + T N G + PP+ +GTN S +I
Sbjct: 88 DGLAGAKTKQMLVKATKYDKSTANKGTTTNKGNSGGTAQENKPPQNKGTNVPNGYSQNDI 147
Query: 270 SEIKQTVVKEGATEVDLSERRVFLLGENR 298
+ V E E L + V + NR
Sbjct: 148 QLMANAVYGESRGEPYLGQVAVAAVILNR 176
>sp|P0A3V1|SLEB_BACCE Spore cortex-lytic enzyme OS=Bacillus cereus GN=sleB PE=1 SV=1
Length = 259
Score = 37.4 bits (85), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 10/149 (6%)
Query: 157 EKKKRKALRVGSEGEDVKAMQEELLKLGFFSGEEDMEYSSFSTGTERAVKTWQAAMGVTE 216
E + ++ G+ GEDV +Q L GF++G+ D F GT A++ +Q G+
Sbjct: 31 EAFSNQVIQRGASGEDVIELQSRLKYNGFYTGKVD---GVFGWGTYWALRNFQEKFGLPV 87
Query: 217 DGIMTSE----LLESLYMEHRVEDNDTNMNADQKGII--QTIPPK-EGTNGAPIASITEI 269
DG+ ++ L+++ + + T N G + PP+ +GTN S +I
Sbjct: 88 DGLAGAKTKQMLVKATKYDKSTANKGTTTNKGNSGGTAQENKPPQNKGTNVPNGYSQNDI 147
Query: 270 SEIKQTVVKEGATEVDLSERRVFLLGENR 298
+ V E E L + V + NR
Sbjct: 148 QLMANAVYGESRGEPYLGQVAVAAVILNR 176
>sp|P59105|SLEB_OCEIH Spore cortex-lytic enzyme OS=Oceanobacillus iheyensis (strain DSM
14371 / JCM 11309 / KCTC 3954 / HTE831) GN=sleB PE=3
SV=1
Length = 276
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 162 KALRVGSEGEDVKAMQEELLKLGFFSGEEDMEYSSFSTGTERAVKTWQAAMGVTEDGI 219
+ ++ G+ GEDV +Q L LGF++G+ D F GT A++ +Q G+ DG+
Sbjct: 36 QVIQQGAVGEDVIELQARLQYLGFYNGKID---GVFGWGTYWALRNFQYEFGMEIDGL 90
>sp|P36550|CWLL_BACLI N-acetylmuramoyl-L-alanine amidase CwlL OS=Bacillus licheniformis
GN=cwlL PE=3 SV=1
Length = 360
Score = 35.4 bits (80), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 164 LRVGSEGEDVKAMQEELLKLGFFSGEEDMEYSSFSTGTERAVKTWQAAMGVTEDGI 219
L+ G+ G VKA+Q+ L+ GF + + S+ T +AVK Q G+ DGI
Sbjct: 196 LKKGASGSQVKALQKRLIAAGFSLPKYGAD-GSYENETVQAVKALQKKAGIAVDGI 250
>sp|Q72GN6|DNAJ_THET2 Chaperone protein DnaJ OS=Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039) GN=dnaJ PE=3 SV=1
Length = 350
Score = 35.0 bits (79), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
Query: 322 TQCLTCRGEG--RLMCLECDGTGEPNIEPQ-FIEWVDEGMKCPYCEGLGYTI---CDVCE 375
C C GEG R C C G G Q F V CP+C+G GY + C C
Sbjct: 127 VPCEACGGEGGRRTPCPTCRGQGVVESYRQSFFGTVVTRTACPHCKGRGYLLAETCPACR 186
Query: 376 GKAVV 380
G+ V
Sbjct: 187 GRGRV 191
>sp|Q5SLW9|DNAJ1_THET8 Chaperone protein DnaJ 1 OS=Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579) GN=dnaJ1 PE=3 SV=1
Length = 350
Score = 35.0 bits (79), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Query: 324 CLTCRGEG--RLMCLECDGTGEPNIEPQ-FIEWVDEGMKCPYCEGLGYTI---CDVCEGK 377
C C GEG R C C G G Q F V CP+C+G GY + C C G+
Sbjct: 129 CEACGGEGGRRTPCPTCRGQGVVESYRQSFFGTVVTRTACPHCKGRGYLLAETCPACRGR 188
Query: 378 AVV 380
V
Sbjct: 189 GRV 191
>sp|Q8GSJ6|LQY1_ARATH Protein disulfide-isomerase LQY1 OS=Arabidopsis thaliana GN=LQY1
PE=1 SV=1
Length = 154
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 315 SKAKKATTQ-CLTCRGEGRLMCLECDGTGEPNIEPQFIEWVDEGMKCPYCEGLGYTICDV 373
+ AK+ TQ C C G G C C G+G N+ + E C C+G G C
Sbjct: 77 NAAKRENTQPCFPCNGTGAQKCRLCVGSG--NVTVELGGGEKEVSNCINCDGAGSLTCTT 134
Query: 374 CEGKAV 379
C+G V
Sbjct: 135 CQGSGV 140
>sp|P38822|BZZ1_YEAST Protein BZZ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=BZZ1 PE=1 SV=1
Length = 633
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 55 LREEQRWLREEQRWFREEQRWIRERESLLREISELKLQIKA-LENRNLSDGASVSVSDTI 113
+E +W++ +W ++ +++ RER L ++ SE ++ A N+ S +SV DT
Sbjct: 15 FKETHKWVQNNLKWLKDIEQFYRERAKLEKDYSERLSRLSAEYFNKKSSTSVPISVGDTP 74
Query: 114 SNIAGLLQ 121
+ G ++
Sbjct: 75 TTTPGSIE 82
>sp|Q2S030|DNAJ_SALRD Chaperone protein DnaJ OS=Salinibacter ruber (strain DSM 13855 /
M31) GN=dnaJ PE=3 SV=1
Length = 388
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Query: 334 MCLECDGTGE-PNIEPQFIEWVDEGMKCPYCEGLGYTI---CDVCEGKAVV 380
MC +CDGTGE + V CP CEG G I CD C G+ V
Sbjct: 172 MCPKCDGTGEIRQVSRSVFGQVVNVQPCPRCEGEGRIIDNLCDDCGGEGRV 222
>sp|Q9NYC9|DYH9_HUMAN Dynein heavy chain 9, axonemal OS=Homo sapiens GN=DNAH9 PE=1 SV=3
Length = 4486
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 36 SKFPIRATSSSSDHEEIRWLREEQRWLREEQRWFREEQRWIRERESLL-REISELKLQIK 94
SKF + +S + +L EQR+ + F E +IR +SLL R ELK + +
Sbjct: 3012 SKF-MAFVHTSVNQTSQSYLSNEQRYNYTTPKSFLE---FIRLYQSLLHRHRKELKCKTE 3067
Query: 95 ALENRNLS-DGASVSVSDTISNIAGLLQMLKEKNMIAERAT---------VAEKEKFEEE 144
LEN L S V D + +A LK+KN A++ V+ ++ +E
Sbjct: 3068 RLENGLLKLHSTSAQVDDLKAKLAAQEVELKQKNEDADKLIQVVGVETDKVSREKAMADE 3127
Query: 145 EQQKEVVKVLEGEKKKR 161
E+QK V +LE ++K++
Sbjct: 3128 EEQKVAVIMLEVKQKQK 3144
>sp|O43093|KINH_SYNRA Kinesin heavy chain OS=Syncephalastrum racemosum PE=2 SV=1
Length = 935
Score = 32.3 bits (72), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 62 LREEQRWFRE-EQRWIRERESLLREISELKLQIKAL-----ENRNLSDGASVSVSDTISN 115
LREE +++E EQ +E + + E+SEL+LQ++ + EN D + D ++
Sbjct: 457 LREEMGYYKEQEQSVTKENQQMTSELSELRLQLQKVSYESKENAITVDSLKEANQDLMAE 516
Query: 116 IAGLLQMLKEKNMIAERATVAEKEK 140
+ L + L E + AT ++KEK
Sbjct: 517 LEELKKNLSEMRQAHKDATDSDKEK 541
>sp|A6QQS3|SPERT_BOVIN Spermatid-associated protein OS=Bos taurus GN=SPERT PE=2 SV=2
Length = 455
Score = 32.0 bits (71), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 16/81 (19%)
Query: 48 DHEEIRWLREEQRWLREEQRWF---REEQRWIRERESLLREISELKLQIKALENRNLSDG 104
+++ ++ LR+E R L+EE R REE R +E L E ++LKLQ K
Sbjct: 369 ENQSLQVLRDENRLLQEENRALHALREEHRLFQEENKALWENNKLKLQQKL--------- 419
Query: 105 ASVSVSDTISNIAGLLQMLKE 125
V DT++ + ++ML E
Sbjct: 420 ----VIDTVTEVTARMEMLIE 436
>sp|Q86VH2|KIF27_HUMAN Kinesin-like protein KIF27 OS=Homo sapiens GN=KIF27 PE=2 SV=1
Length = 1401
Score = 31.6 bits (70), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 13/125 (10%)
Query: 41 RATSSSSDH-----EEIRWLREEQRWLREEQRWFREEQRWIRERESLLREISELKLQIKA 95
+ + S DH E+ +WL EE + +++ E + +++RE+++ + L +
Sbjct: 909 KGSFGSIDHLQKLDEQKKWLDEEVEKVLNQRQELEELEADLKKREAIVSKKEALLQEKSH 968
Query: 96 LENRNLSDGASVSV-SDTISNIAGLL-QMLKEKNMIAERATVAEKEKFEEEEQQKEVVKV 153
LEN+ L +++ S IS LL Q L EKN+ + +T EK K E+ V+V
Sbjct: 969 LENKKLRSSQALNTDSLKISTRLNLLEQELSEKNVQLQTSTAEEKTKISEQ------VEV 1022
Query: 154 LEGEK 158
L+ EK
Sbjct: 1023 LQKEK 1027
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.130 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 140,706,419
Number of Sequences: 539616
Number of extensions: 6048153
Number of successful extensions: 31166
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 622
Number of HSP's that attempted gapping in prelim test: 28008
Number of HSP's gapped (non-prelim): 2514
length of query: 380
length of database: 191,569,459
effective HSP length: 119
effective length of query: 261
effective length of database: 127,355,155
effective search space: 33239695455
effective search space used: 33239695455
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)