BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040779
(300 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3T57|A Chain A, Activity And Crystal Structure Of Arabidopsis
Udp-N-Acetylglucosamine Acyltransferase
Length = 305
Score = 331 bits (848), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 157/208 (75%), Positives = 175/208 (84%)
Query: 71 FIHPTSIVHPNAIIGQGVSVGPFCTIGSAAKLGDGCLLYPSSHIFGNTELGDHCILMTGA 130
IHP+++VHPNA+IG+GVSVGP+CTIGS+ KLG+GC LYPSSH+FGNTELG+ C+LMTGA
Sbjct: 9 LIHPSAVVHPNAVIGKGVSVGPYCTIGSSVKLGNGCKLYPSSHVFGNTELGESCVLMTGA 68
Query: 131 VVGDDLPGQTVFGCNNIIGHHAVVGVKCQDMKYKSGDECFVDVGNNNEFREHVSIHRSSK 190
VVGD+LPG T GCNNIIGHHAVVGVKCQD+KYK GDECF+ +GNNNE RE SIHRSSK
Sbjct: 69 VVGDELPGYTFIGCNNIIGHHAVVGVKCQDLKYKHGDECFLCIGNNNEIREFCSIHRSSK 128
Query: 191 SGDRTVIGDNNLIMGSCHIAHDCKIGNYNIFANNTLLAGHVVVEDYTHTAGAIVIHQFCX 250
D+TVIGDNNLIMGSCHIAHDCKIG+ NIFANNTLLAGHVVVED THTAGA V+HQFC
Sbjct: 129 PSDKTVIGDNNLIMGSCHIAHDCKIGDRNIFANNTLLAGHVVVEDNTHTAGASVVHQFCH 188
Query: 251 XXXXXXXXXXXXXXQDVPKYSMVAGERA 278
QDVPKY MVAGERA
Sbjct: 189 IGSFAFIGGGSVVSQDVPKYMMVAGERA 216
>pdb|4E6U|A Chain A, Structure Of Lpxa From Acinetobacter Baumannii At 1.4a
Resolution (P63 Form)
Length = 265
Score = 137 bits (345), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 114/209 (54%), Gaps = 24/209 (11%)
Query: 71 FIHPTSIVHPNAIIGQGVSVGPFCTIGSAAKLGDGCLLYPSSHIFGNTELGDHCILMTGA 130
IH T+I+ P+A+I V +GP+C IG +G G L+ SH+
Sbjct: 9 LIHSTAIIDPSAVIASDVQIGPYCIIGPQVTIGAGTKLH--SHV---------------- 50
Query: 131 VVGDDLPGQTVFGCNNIIGHHAVVGVKCQDMKYKSGDECFVDVGNNNEFREHVSIHRSS- 189
VVG G T G NN I A VG CQD+KYK G+E ++++GNNN REH S+HR +
Sbjct: 51 VVG----GFTRIGQNNEIFQFASVGEVCQDLKYK-GEETWLEIGNNNLIREHCSLHRGTV 105
Query: 190 KSGDRTVIGDNNLIMGSCHIAHDCKIGNYNIFANNTLLAGHVVVEDYTHTAGAIVIHQFC 249
+ T IG +NL+M + HIAHDC +G++NIFANN +AGHV + D+ G IHQFC
Sbjct: 106 QDNALTKIGSHNLLMVNTHIAHDCIVGDHNIFANNVGVAGHVHIGDHVIVGGNSGIHQFC 165
Query: 250 XXXXXXXXXXXXXXXQDVPKYSMVAGERA 278
+DVP Y M +G A
Sbjct: 166 KIDSYSMIGGASLILKDVPAYVMASGNPA 194
>pdb|4E6T|A Chain A, Structure Of Lpxa From Acinetobacter Baumannii At 1.8a
Resolution (P212121 Form)
pdb|4E6T|B Chain B, Structure Of Lpxa From Acinetobacter Baumannii At 1.8a
Resolution (P212121 Form)
pdb|4E6T|C Chain C, Structure Of Lpxa From Acinetobacter Baumannii At 1.8a
Resolution (P212121 Form)
Length = 294
Score = 137 bits (345), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 114/209 (54%), Gaps = 24/209 (11%)
Query: 71 FIHPTSIVHPNAIIGQGVSVGPFCTIGSAAKLGDGCLLYPSSHIFGNTELGDHCILMTGA 130
IH T+I+ P+A+I V +GP+C IG +G G L+ SH+
Sbjct: 38 LIHSTAIIDPSAVIASDVQIGPYCIIGPQVTIGAGTKLH--SHV---------------- 79
Query: 131 VVGDDLPGQTVFGCNNIIGHHAVVGVKCQDMKYKSGDECFVDVGNNNEFREHVSIHRSS- 189
VVG G T G NN I A VG CQD+KYK G+E ++++GNNN REH S+HR +
Sbjct: 80 VVG----GFTRIGQNNEIFQFASVGEVCQDLKYK-GEETWLEIGNNNLIREHCSLHRGTV 134
Query: 190 KSGDRTVIGDNNLIMGSCHIAHDCKIGNYNIFANNTLLAGHVVVEDYTHTAGAIVIHQFC 249
+ T IG +NL+M + HIAHDC +G++NIFANN +AGHV + D+ G IHQFC
Sbjct: 135 QDNALTKIGSHNLLMVNTHIAHDCIVGDHNIFANNVGVAGHVHIGDHVIVGGNSGIHQFC 194
Query: 250 XXXXXXXXXXXXXXXQDVPKYSMVAGERA 278
+DVP Y M +G A
Sbjct: 195 KIDSYSMIGGASLILKDVPAYVMASGNPA 223
>pdb|2JF2|A Chain A, Nucleotide Substrate Binding By Udp-n-acetylglucosamine
Acyltransferase
Length = 264
Score = 130 bits (327), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 107/209 (51%), Gaps = 24/209 (11%)
Query: 71 FIHPTSIVHPNAIIGQGVSVGPFCTIGSAAKLGDGCLLYPSSHIFGNTELGDHCILMTGA 130
F+HPT+IV A IG +GPFC +G ++G+G +L SH+ N
Sbjct: 9 FVHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVL--KSHVVVN------------- 53
Query: 131 VVGDDLPGQTVFGCNNIIGHHAVVGVKCQDMKYKSGDECFVDVGNNNEFREHVSIHRSS- 189
G T G +N I A +G QD+KY +G+ V++G+ N RE V+IHR +
Sbjct: 54 -------GHTKIGRDNEIYQFASIGEVNQDLKY-AGEPTRVEIGDRNRIRESVTIHRGTV 105
Query: 190 KSGDRTVIGDNNLIMGSCHIAHDCKIGNYNIFANNTLLAGHVVVEDYTHTAGAIVIHQFC 249
+ G T +G +NL+M + HIAHDC +GN I ANN LAGHV V+D+ G +HQFC
Sbjct: 106 QGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFC 165
Query: 250 XXXXXXXXXXXXXXXQDVPKYSMVAGERA 278
QDVP Y + G A
Sbjct: 166 IIGAHVMVGGCSGVAQDVPPYVIAQGNHA 194
>pdb|2AQ9|A Chain A, Structure Of E. Coli Lpxa With A Bound Peptide That Is
Competitive With Acyl-Acp
pdb|2JF3|A Chain A, Nucleotide Substrate Binding By Udp-N-Acetylglucosamine
Acyltransferase
pdb|1LXA|A Chain A, Udp N-Acetylglucosamine Acyltransferase
pdb|2QIA|A Chain A, Structural Basis For The Acyl Chain Selectivity And
Mechanism Of Udp-N-Acetylglucosamine Acyltransferase
pdb|2QIV|X Chain X, Structural Basis For The Acyl Chain Selectivity And
Mechanism Of Udp-N-Acetylglucosamine Acyltransferase
Length = 262
Score = 130 bits (327), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 107/209 (51%), Gaps = 24/209 (11%)
Query: 71 FIHPTSIVHPNAIIGQGVSVGPFCTIGSAAKLGDGCLLYPSSHIFGNTELGDHCILMTGA 130
F+HPT+IV A IG +GPFC +G ++G+G +L SH+ N
Sbjct: 7 FVHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVL--KSHVVVN------------- 51
Query: 131 VVGDDLPGQTVFGCNNIIGHHAVVGVKCQDMKYKSGDECFVDVGNNNEFREHVSIHRSS- 189
G T G +N I A +G QD+KY +G+ V++G+ N RE V+IHR +
Sbjct: 52 -------GHTKIGRDNEIYQFASIGEVNQDLKY-AGEPTRVEIGDRNRIRESVTIHRGTV 103
Query: 190 KSGDRTVIGDNNLIMGSCHIAHDCKIGNYNIFANNTLLAGHVVVEDYTHTAGAIVIHQFC 249
+ G T +G +NL+M + HIAHDC +GN I ANN LAGHV V+D+ G +HQFC
Sbjct: 104 QGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFC 163
Query: 250 XXXXXXXXXXXXXXXQDVPKYSMVAGERA 278
QDVP Y + G A
Sbjct: 164 IIGAHVMVGGCSGVAQDVPPYVIAQGNHA 192
>pdb|4EQY|A Chain A, Crystal Structure Of Acyl-[acyl-Carrier-Protein]--Udp-N-
Acetylglucosamine O-Acyltransferase From Burkholderia
Thailandensis
pdb|4EQY|B Chain B, Crystal Structure Of Acyl-[acyl-Carrier-Protein]--Udp-N-
Acetylglucosamine O-Acyltransferase From Burkholderia
Thailandensis
pdb|4EQY|C Chain C, Crystal Structure Of Acyl-[acyl-Carrier-Protein]--Udp-N-
Acetylglucosamine O-Acyltransferase From Burkholderia
Thailandensis
pdb|4EQY|E Chain E, Crystal Structure Of Acyl-[acyl-Carrier-Protein]--Udp-N-
Acetylglucosamine O-Acyltransferase From Burkholderia
Thailandensis
pdb|4EQY|F Chain F, Crystal Structure Of Acyl-[acyl-Carrier-Protein]--Udp-N-
Acetylglucosamine O-Acyltransferase From Burkholderia
Thailandensis
pdb|4EQY|G Chain G, Crystal Structure Of Acyl-[acyl-Carrier-Protein]--Udp-N-
Acetylglucosamine O-Acyltransferase From Burkholderia
Thailandensis
Length = 283
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 24/208 (11%)
Query: 72 IHPTSIVHPNAIIGQGVSVGPFCTIGSAAKLGDGCLLYPSSHIFGNTELGDHCILMTGAV 131
IHPT+I+ P A + + V VGP+ +GS +G T +G H ++
Sbjct: 25 IHPTAIIEPGAQLHETVEVGPYAIVGSNVTIG------------ARTTIGSHSVI----- 67
Query: 132 VGDDLPGQTVFGCNNIIGHHAVVGVKCQDMKYKSGDECFVDVGNNNEFREHVSIHRSS-K 190
G T G +N IGH+A VG + QDMKYK V +G+ N RE +IH + +
Sbjct: 68 -----EGHTTIGEDNRIGHYASVGGRPQDMKYKDEPTRLV-IGDRNTIREFTTIHTGTVQ 121
Query: 191 SGDRTVIGDNNLIMGSCHIAHDCKIGNYNIFANNTLLAGHVVVEDYTHTAGAIVIHQFCX 250
T +GD+N IM HI HDC++G++ + ++N +AGHV + D+ G +HQ+
Sbjct: 122 DAGVTTLGDDNWIMAYVHIGHDCRVGSHVVLSSNAQMAGHVEIGDWAIVGGMSGVHQYVR 181
Query: 251 XXXXXXXXXXXXXXQDVPKYSMVAGERA 278
QD+P + + AG +A
Sbjct: 182 IGAHSMLGGASALVQDIPPFVIAAGNKA 209
>pdb|1J2Z|A Chain A, Crystal Structure Of Udp-n-acetylglucosamine
Acyltransferase
Length = 270
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 101/208 (48%), Gaps = 24/208 (11%)
Query: 72 IHPTSIVHPNAIIGQGVSVGPFCTIGSAAKLGDGCLLYPSSHIFGNTELGDHCILMTGAV 131
I T+I+ P A I +GV +G FC IG KL +G L+ +
Sbjct: 4 IAKTAIISPKAEINKGVEIGEFCVIGDGVKLDEGVKLHNNV------------------- 44
Query: 132 VGDDLPGQTVFGCNNIIGHHAVVGVKCQDMKYKSGDECFVDVGNNNEFREHVSIHRSSKS 191
L G T G N I AV+G + QD+KYK G+ + +G +N RE I+ ++
Sbjct: 45 ---TLQGHTFVGKNTEIFPFAVLGTQPQDLKYK-GEYSELIIGEDNLIREFCMINPGTEG 100
Query: 192 G-DRTVIGDNNLIMGSCHIAHDCKIGNYNIFANNTLLAGHVVVEDYTHTAGAIVIHQFCX 250
G +T+IGD NL+M H+AHDC IG++ I AN LAGH+ + DY + G IHQF
Sbjct: 101 GIKKTLIGDKNLLMAYVHVAHDCVIGSHCILANGVTLAGHIEIGDYVNIGGLTAIHQFVR 160
Query: 251 XXXXXXXXXXXXXXQDVPKYSMVAGERA 278
+DVP Y V G RA
Sbjct: 161 IAKGCMIAGKSALGKDVPPYCTVEGNRA 188
>pdb|3HSQ|A Chain A, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
pdb|3HSQ|B Chain B, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
pdb|3HSQ|C Chain C, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
pdb|3I3A|A Chain A, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
pdb|3I3A|B Chain B, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
pdb|3I3A|C Chain C, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
pdb|3I3X|A Chain A, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
pdb|3I3X|B Chain B, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
pdb|3I3X|C Chain C, Structural Basis For The Sugar Nucleotide And Acyl Chain
Selectivity Of Leptospira Interrogans Lpxa
Length = 259
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 72 IHPTSIVHPNAIIGQGVSVGPFCTIGSAAKLGDGCLLYPSSHIFGNTELGDHCILMTGAV 131
IHPT+I+ P A + + V VGP+ I + +G ++ I +E+G GAV
Sbjct: 3 IHPTAIIDPKAELHESVEVGPYSIIEGNVSIQEGTIIEGHVKICAGSEIGKFNRFHQGAV 62
Query: 132 VGDDLPGQTVFGCNNIIGHHAVVGVKCQDMKYKSGDECFVDVGNNNEFREHVSIHRSSKS 191
+G V QD+ + +G++N FRE+ +IH+ +K
Sbjct: 63 IG----------------------VMPQDLGFNQQLLTKTVIGDHNIFREYSNIHKGTKE 100
Query: 192 GDRTVIGDNNLIMGSCHIAHDCKIGNYNIFANNTLLAGHVVVEDYTHTAGAIVIHQFCXX 251
TVIG+ N MG+ H+ HDC +GN NI + +LAGHV + ++ +G + +HQFC
Sbjct: 101 DSPTVIGNKNYFMGNSHVGHDCILGNNNILTHGAVLAGHVTLGNFAFISGLVAVHQFCFV 160
Query: 252 XXXXXXXXXXXXXQDVPKYSMVAG 275
QDVP YS V G
Sbjct: 161 GDYSMVAGLAKVVQDVPPYSTVDG 184
>pdb|3R0S|A Chain A, Udp-N-Acetylglucosamine Acyltransferase From Campylobacter
Jejuni
Length = 266
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 72 IHPTSIVHPNAIIGQGVSVGPFCTIGSAAKLGDGCLLYPSSHIFGNTELGDHCILMTGAV 131
IHP++++ A +G V + + + AK+G+ ++ + I +T +GDH + + A+
Sbjct: 7 IHPSAVIEEGAQLGDDVVIEAYAYVSKDAKIGNNVVIKQGARILSDTTIGDHSRVFSYAI 66
Query: 132 VGDDLPGQTVFGCNNIIGHHAVVGVKCQDMKYKSGDECFVDVGNNNEFREHVSIHRSSKS 191
VG D+P QD+ YK + V +G N RE +I+ +
Sbjct: 67 VG-DIP---------------------QDISYKEEQKSGVVIGKNATIREFATINSGTAK 104
Query: 192 GDR-TVIGDNNLIMGSCHIAHDCKIGNYNIFANNTLLAGHVVVEDYTHTAGAIVIHQFCX 250
GD T IGDN I CHIAHDC +GN I ANN LAGHV + D+T G IHQF
Sbjct: 105 GDGFTRIGDNAFIXAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGLTPIHQFVK 164
Query: 251 XXXXXXXXXXXXXXQDVPKYSMVAGERA 278
QD+ + + G RA
Sbjct: 165 VGEGCXIAGASALSQDIVPFCLAEGNRA 192
>pdb|3EH0|A Chain A, Crystal Structure Of Lpxd From Escherichia Coli
pdb|3EH0|B Chain B, Crystal Structure Of Lpxd From Escherichia Coli
pdb|3EH0|C Chain C, Crystal Structure Of Lpxd From Escherichia Coli
Length = 341
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 72 IHPTSIVHPNAIIGQGVSVGPFCTIGSAAKLGDGCLLYPSSHIFGNTELGDHCILMTGAV 131
I +++ +G V +G C +G +K+G G L+ + I+ ++G +C++ +G V
Sbjct: 118 IGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHEIQIGQNCLIQSGTV 177
Query: 132 VGDDLPGQTVFGCNNIIGHHAVVGVKCQDMKYKSGDECFVDVGNNNEFREHVSIHRSSKS 191
VG D FG N G+ VK + V +G+ E +I R +
Sbjct: 178 VGAD-----GFGYANDRGNW----VKIPQIGR-------VIIGDRVEIGACTTIDRGAL- 220
Query: 192 GDRTVIGDNNLIMGSCHIAHDCKIGNYNIFANNTLLAGHVVVEDYTHTAGAIVIH 246
D T+IG+ +I C IAH+ IG+ A ++AG + + Y GA VI+
Sbjct: 221 -DDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVIN 274
>pdb|2IU8|A Chain A, Chlamydia Trachomatis Lpxd With 25mm Udpglcnac (Complex I)
pdb|2IU8|B Chain B, Chlamydia Trachomatis Lpxd With 25mm Udpglcnac (Complex I)
pdb|2IU8|C Chain C, Chlamydia Trachomatis Lpxd With 25mm Udpglcnac (Complex I)
pdb|2IU9|A Chain A, Chlamydia Trachomatis Lpxd With 100mm Udpglcnac (complex
Ii)
pdb|2IU9|B Chain B, Chlamydia Trachomatis Lpxd With 100mm Udpglcnac (complex
Ii)
pdb|2IU9|C Chain C, Chlamydia Trachomatis Lpxd With 100mm Udpglcnac (complex
Ii)
pdb|2IUA|A Chain A, C. Trachomatis Lpxd
pdb|2IUA|B Chain B, C. Trachomatis Lpxd
pdb|2IUA|C Chain C, C. Trachomatis Lpxd
Length = 374
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 81/187 (43%), Gaps = 25/187 (13%)
Query: 72 IHPTSIVHPNAIIGQGVSVGPFCT------IGSAAKLGDGCL------------LYPSSH 113
IHPT+++HP AII V + P+ +GSA +G G + ++P
Sbjct: 127 IHPTAVIHPTAIIEDHVCIEPYAVVCQHAHVGSACHIGSGSVIGAYSTVGEHSYIHPRVV 186
Query: 114 IFGNTELGDHCILMTGAVVGDDLPG--QTVFGCNNIIGHHAVVGVKCQDMKYKSGDECFV 171
I +G I+ GAV+G G + FG + + H +G + + G +
Sbjct: 187 IRERVSIGKRVIIQPGAVIGSCGFGYVTSAFGQHKHLKH---LGKVIIEDDVEIGANTTI 243
Query: 172 DVG--NNNEFREHVSIHRSSKSGDRTVIGDNNLIMGSCHIAHDCKIGNYNIFANNTLLAG 229
D G ++ RE I + + +G +++I+ IA KIGN+ I + G
Sbjct: 244 DRGRFKHSVVREGSKIDNLVQIAHQVEVGQHSMIVAQAGIAGSTKIGNHVIIGGQAGITG 303
Query: 230 HVVVEDY 236
H+ + D+
Sbjct: 304 HICIADH 310
>pdb|3PMO|A Chain A, The Structure Of Lpxd From Pseudomonas Aeruginosa At 1.3 A
Resolution
Length = 372
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 76 SIVHPNAIIGQGVSVGPFCTIGSAAKLGDGCLLYPSSHIFGNTELGDHCILMTGAVVGDD 135
+++ A IG GVS+G C IG+ + +G+G L P ++ + +G + +GAV+G +
Sbjct: 144 AVIESGARIGAGVSIGAHCVIGARSVIGEGGWLAPRVTLYHDVTIGARVSIQSGAVIGGE 203
Query: 136 LPGQTVFGCNNIIGHHAVVGVKCQDMKYKSGDECFVDVGNNNEFREHVSIHRSSKSGDRT 195
FG N G Q + G V +G++ E + +I R + S T
Sbjct: 204 -----GFGFANEKG-------VWQKIAQIGG----VTIGDDVEIGANTTIDRGALS--DT 245
Query: 196 VIGDNNLIMGSCHIAHDCKIGNYNIFANNTLLAGHVVVEDYTHTAGAI 243
+IG+ + IAH+ +IG++ A ++G + + AG +
Sbjct: 246 LIGNGVKLDNQIMIAHNVQIGDHTAMAACVGISGSAKIGRHCMLAGGV 293
>pdb|4E75|A Chain A, Structure Of Lpxd From Acinetobacter Baumannii At 2.85a
Resolution (p21 Form)
pdb|4E75|B Chain B, Structure Of Lpxd From Acinetobacter Baumannii At 2.85a
Resolution (p21 Form)
pdb|4E75|C Chain C, Structure Of Lpxd From Acinetobacter Baumannii At 2.85a
Resolution (p21 Form)
pdb|4E75|D Chain D, Structure Of Lpxd From Acinetobacter Baumannii At 2.85a
Resolution (p21 Form)
pdb|4E75|E Chain E, Structure Of Lpxd From Acinetobacter Baumannii At 2.85a
Resolution (p21 Form)
pdb|4E75|F Chain F, Structure Of Lpxd From Acinetobacter Baumannii At 2.85a
Resolution (p21 Form)
pdb|4E79|A Chain A, Structure Of Lpxd From Acinetobacter Baumannii At 2.66a
Resolution (p4322 Form)
pdb|4E79|B Chain B, Structure Of Lpxd From Acinetobacter Baumannii At 2.66a
Resolution (p4322 Form)
pdb|4E79|C Chain C, Structure Of Lpxd From Acinetobacter Baumannii At 2.66a
Resolution (p4322 Form)
Length = 357
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 71/182 (39%), Gaps = 18/182 (9%)
Query: 72 IHPTSIVHPNAIIGQGVSVGPFCTIGSAAKLGDGCLLYPSSHIFGNTELGDHCILMTGAV 131
I T+ +HP+A+I + +G + IG +GD ++ + + N E+G C + +
Sbjct: 105 IESTARIHPSAVISETAYIGHYVVIGENCVVGDNTVIQSHTKLDDNVEVGKDCFIDSYVT 164
Query: 132 V--GDDLPGQTVFGCNNIIGHH--------------AVVGVKCQDMKYKSGDECFVDVG- 174
+ L + + +IG A +G + G C +D G
Sbjct: 165 ITGSSKLRDRVRIHSSTVIGGEGFGFAPYQGKWHRIAQLGSVLIGNDVRIGSNCSIDRGA 224
Query: 175 -NNNEFREHVSIHRSSKSGDRTVIGDNNLIMGSCHIAHDCKIGNYNIFANNTLLAGHVVV 233
+N + V I + IG N I C IA KIG I A +AGH+ +
Sbjct: 225 LDNTILEDGVIIDNLVQIAHNVHIGSNTAIAAKCGIAGSTKIGKNCILAGACGVAGHLSI 284
Query: 234 ED 235
D
Sbjct: 285 AD 286
>pdb|4EAB|A Chain A, X-Ray Crystal Structure Of The H141a Mutant Of
Gdp-Perosamine N-Acetyl Transferase From Caulobacter
Crescentus In Complex With Coa And Gdp- Perosamine
Length = 220
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 22/101 (21%)
Query: 72 IHPTSIVHPNAIIGQGVSV------------GPFCTIGSAA------KLGDGCLLYPSSH 113
IHP+++V P+ +G+GV+V G I + A +LG C L P+S
Sbjct: 102 IHPSAVVSPSVRLGEGVAVMAGVAINADSWIGDLAIINTGAVVDADCRLGAACHLGPASA 161
Query: 114 IFGNTELGDHCILMTGAVVGDDLPGQTVFGCNNIIGHHAVV 154
+ G +G+ L GA V +PG T+ G + I+G VV
Sbjct: 162 LAGGVSVGERAFLGVGARV---IPGVTI-GADTIVGAGGVV 198
>pdb|4EAA|A Chain A, X-Ray Crystal Structure Of The H141n Mutant Of Perosamine
N- Acetyltransferase From Caulobacter Crescentus In
Complex With Coa And Gdp-Perosamine
Length = 220
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 22/101 (21%)
Query: 72 IHPTSIVHPNAIIGQGVSV------------GPFCTIGSAA------KLGDGCLLYPSSH 113
IHP+++V P+ +G+GV+V G I + A +LG C L P+S
Sbjct: 102 IHPSAVVSPSVRLGEGVAVMAGVAINADSWIGDLAIINTGAVVDNDCRLGAACHLGPASA 161
Query: 114 IFGNTELGDHCILMTGAVVGDDLPGQTVFGCNNIIGHHAVV 154
+ G +G+ L GA V +PG T+ G + I+G VV
Sbjct: 162 LAGGVSVGERAFLGVGARV---IPGVTI-GADTIVGAGGVV 198
>pdb|4EA7|A Chain A, X-Ray Crystal Structure Of Perb From Caulobacter
Crescentus In Complex With Coa And Gdp-Perosamine At 1.0
Angstrom Resolution
pdb|4EA8|A Chain A, X-Ray Crystal Structure Of Perb From Caulobacter
Crescentus In Complex With Coenzyme A And
Gdp-N-Acetylperosamine At 1 Angstrom Resolution
pdb|4EA9|A Chain A, X-Ray Structure Of Gdp-Perosamine N-Acetyltransferase In
Complex With Transition State Analog At 0.9 Angstrom
Resolution
Length = 220
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 22/101 (21%)
Query: 72 IHPTSIVHPNAIIGQGVSV------------GPFCTIGSAA------KLGDGCLLYPSSH 113
IHP+++V P+ +G+GV+V G I + A +LG C L P+S
Sbjct: 102 IHPSAVVSPSVRLGEGVAVMAGVAINADSWIGDLAIINTGAVVDHDCRLGAACHLGPASA 161
Query: 114 IFGNTELGDHCILMTGAVVGDDLPGQTVFGCNNIIGHHAVV 154
+ G +G+ L GA V +PG T+ G + I+G VV
Sbjct: 162 LAGGVSVGERAFLGVGARV---IPGVTI-GADTIVGAGGVV 198
>pdb|3FS8|A Chain A, Crystal Structure Of Qdtc, The Dtdp-3-Amino-3,6-Dideoxy-D-
Glucose N-Acetyl Transferase From Thermoanaerobacterium
Thermosaccharolyticum In Complex With Acetyl-Coa
pdb|3FS8|B Chain B, Crystal Structure Of Qdtc, The Dtdp-3-Amino-3,6-Dideoxy-D-
Glucose N-Acetyl Transferase From Thermoanaerobacterium
Thermosaccharolyticum In Complex With Acetyl-Coa
pdb|3FSB|A Chain A, Crystal Structure Of Qdtc, The Dtdp-3-Amino-3,6-Dideoxy-D-
Glucose N-Acetyl Transferase From Thermoanaerobacterium
Thermosaccharolyticum In Complex With Coa And
Dtdp-3-Amino- Quinovose
pdb|3FSB|B Chain B, Crystal Structure Of Qdtc, The Dtdp-3-Amino-3,6-Dideoxy-D-
Glucose N-Acetyl Transferase From Thermoanaerobacterium
Thermosaccharolyticum In Complex With Coa And
Dtdp-3-Amino- Quinovose
pdb|3FSC|A Chain A, Crystal Structure Of Qdtc, The Dtdp-3-Amino-3,6-Dideoxy-D-
Glucose N-Acetyl Transferase From Thermoanaerobacterium
Thermosaccharolyticum In Complex With Coa And
Dtdp-3-Amino- Fucose
pdb|3FSC|B Chain B, Crystal Structure Of Qdtc, The Dtdp-3-Amino-3,6-Dideoxy-D-
Glucose N-Acetyl Transferase From Thermoanaerobacterium
Thermosaccharolyticum In Complex With Coa And
Dtdp-3-Amino- Fucose
Length = 273
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Query: 78 VHPNAIIGQGVSVGPFCTIGSAAKLGDGCLLYPSSHIFGNTELGDHCILMTGAVVGDDLP 137
+ +AII +GV +G TI + GC++ + HI + +G IL G + D
Sbjct: 5 ISKSAIIKEGVIIGENVTIEDNVYIDYGCIIRDNVHIKKGSFIGARSIL--GEYLVDFYN 62
Query: 138 GQTVFGCNNIIGHHAVVGVKCQDMKYKSGDECFVDVGNNNEFREHVSIHRSSKSGDRTVI 197
+ IIG +A+ ++ +++ Y GD +G+N + V+I ++K G
Sbjct: 63 DRINKKHPLIIGENAL--IRTENVIY--GDTI---IGDNFQTGHKVTIRENTKIG----- 110
Query: 198 GDNNLIMGSCH-IAHDCKIGNYNIFANNTLLAGHVVVEDY 236
NN+ +G+ I H IGNY +N + +++D+
Sbjct: 111 --NNVKIGTLSDIQHHVYIGNYVNIHSNVFVGEKSIIKDF 148
>pdb|3R1W|A Chain A, Crystal Structure Of A Carbonic Anhydrase From A Crude Oil
Degrading Psychrophilic Library
pdb|3R1W|B Chain B, Crystal Structure Of A Carbonic Anhydrase From A Crude Oil
Degrading Psychrophilic Library
pdb|3R1W|C Chain C, Crystal Structure Of A Carbonic Anhydrase From A Crude Oil
Degrading Psychrophilic Library
Length = 189
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 28/139 (20%)
Query: 97 GSAAKLGDGCLLYPSSHIFGNTELGDHCILMTGAVVGDDLPGQTVFGCNNIIGHHAVVGV 156
G + KLG+ + SS I G+ ELGD C + AV+ D+ HH +G
Sbjct: 17 GISPKLGERVFVDRSSVIIGDVELGDDCSVWPLAVIRGDM-------------HHIRIGA 63
Query: 157 KCQDMKYKSGDECFVDVGNNNEFREHVSIHRSSKSGDRTVIGDNNLIMGSCHIAHDCKIG 216
+ D + + + +++ + G +IGD ++ +G + H C IG
Sbjct: 64 RTSVQ-----DGSVLHITHASDY---------NPGGYPLIIGD-DVTIGHQAMLHGCTIG 108
Query: 217 NYNIFANNTLLAGHVVVED 235
N + +++ +VED
Sbjct: 109 NRVLIGMKSMIMDGAIVED 127
>pdb|3BSS|A Chain A, Pgld From Campylobacter Jejuni, Nctc 11168, With Native
Substrate
pdb|3BSW|A Chain A, Pgld-Citrate Complex, From Campylobacter Jejuni Nctc 11168
pdb|3BSY|A Chain A, Pgld From Campylobacter Jejuni, Nctc 11168, In Complex
With Acetyl Coenzyme A
pdb|3BSY|B Chain B, Pgld From Campylobacter Jejuni, Nctc 11168, In Complex
With Acetyl Coenzyme A
pdb|3BSY|C Chain C, Pgld From Campylobacter Jejuni, Nctc 11168, In Complex
With Acetyl Coenzyme A
Length = 198
Score = 34.3 bits (77), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 25/127 (19%)
Query: 56 HVYGDKYETXXXXXXFIHPTSIVHPNAIIGQ--GVSVGPFCTIGSAAKLGDGCLLYPSSH 113
+Y E IH ++++ P+AI+ + G+ + P+ I + AK+ G +L SS
Sbjct: 66 KIYQKISENGFKIVNLIHKSALISPSAIVEENAGILIMPYVVINAKAKIEKGVILNTSSV 125
Query: 114 I------------------FGNTELGDHCILMTGAVVGDDLPGQTVFGCNNIIGHHAVVG 155
I GN ++G +C L + V LP ++ ++I+G A +
Sbjct: 126 IEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCV---LPNLSL-ADDSILGGGATL- 180
Query: 156 VKCQDMK 162
VK QD K
Sbjct: 181 VKNQDEK 187
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 72 IHPTSIVHPNAIIGQG--VSVGPFCTIGSAAKLGDGCLLYPSSHIFGNTELGDHCILMTG 129
++ +S++ +IG+ VSVG C K+G C L +S + N L D IL G
Sbjct: 120 LNTSSVIEHECVIGEFSHVSVGAKCA--GNVKIGKNCFLGINSCVLPNLSLADDSILGGG 177
Query: 130 AVVGDDLPGQTVF 142
A + + + VF
Sbjct: 178 ATLVKNQDEKGVF 190
>pdb|3BFP|A Chain A, Crystal Structure Of Apo-Pgld From Campylobacter Jejuni
pdb|2VHE|A Chain A, Pgld-Coa Complex: An Acetyl Transferase From Campylobacter
Jejuni
pdb|2VHE|B Chain B, Pgld-Coa Complex: An Acetyl Transferase From Campylobacter
Jejuni
Length = 194
Score = 34.3 bits (77), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 25/127 (19%)
Query: 56 HVYGDKYETXXXXXXFIHPTSIVHPNAIIGQ--GVSVGPFCTIGSAAKLGDGCLLYPSSH 113
+Y E IH ++++ P+AI+ + G+ + P+ I + AK+ G +L SS
Sbjct: 62 KIYQKISENGFKIVNLIHKSALISPSAIVEENAGILIMPYVVINAKAKIEKGVILNTSSV 121
Query: 114 I------------------FGNTELGDHCILMTGAVVGDDLPGQTVFGCNNIIGHHAVVG 155
I GN ++G +C L + V LP ++ ++I+G A +
Sbjct: 122 IEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCV---LPNLSL-ADDSILGGGATL- 176
Query: 156 VKCQDMK 162
VK QD K
Sbjct: 177 VKNQDEK 183
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 72 IHPTSIVHPNAIIGQG--VSVGPFCTIGSAAKLGDGCLLYPSSHIFGNTELGDHCILMTG 129
++ +S++ +IG+ VSVG C K+G C L +S + N L D IL G
Sbjct: 116 LNTSSVIEHECVIGEFSHVSVGAKCA--GNVKIGKNCFLGINSCVLPNLSLADDSILGGG 173
Query: 130 AVVGDDLPGQTVF 142
A + + + VF
Sbjct: 174 ATLVKNQDEKGVF 186
>pdb|2NPO|A Chain A, Crystal Structure Of Putative Transferase From
Campylobacter Jejuni Subsp. Jejuni Nctc 11168
Length = 207
Score = 34.3 bits (77), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 25/127 (19%)
Query: 56 HVYGDKYETXXXXXXFIHPTSIVHPNAIIGQ--GVSVGPFCTIGSAAKLGDGCLLYPSSH 113
+Y E IH ++++ P+AI+ + G+ + P+ I + AK+ G +L SS
Sbjct: 65 KIYQKISENGFKIVNLIHKSALISPSAIVEENAGILIMPYVVINAKAKIEKGVILNTSSV 124
Query: 114 I------------------FGNTELGDHCILMTGAVVGDDLPGQTVFGCNNIIGHHAVVG 155
I GN ++G +C L + V LP ++ ++I+G A +
Sbjct: 125 IEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCV---LPNLSL-ADDSILGGGATL- 179
Query: 156 VKCQDMK 162
VK QD K
Sbjct: 180 VKNQDEK 186
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 72 IHPTSIVHPNAIIGQG--VSVGPFCTIGSAAKLGDGCLLYPSSHIFGNTELGDHCILMTG 129
++ +S++ +IG+ VSVG C K+G C L +S + N L D IL G
Sbjct: 119 LNTSSVIEHECVIGEFSHVSVGAKCA--GNVKIGKNCFLGINSCVLPNLSLADDSILGGG 176
Query: 130 AVVGDDLPGQTVF 142
A + + + VF
Sbjct: 177 ATLVKNQDEKGVF 189
>pdb|3HJJ|A Chain A, Crystal Structure Of Maltose O-Acetyltransferase From
Bacillus Anthracis
pdb|3HJJ|B Chain B, Crystal Structure Of Maltose O-Acetyltransferase From
Bacillus Anthracis
pdb|3HJJ|C Chain C, Crystal Structure Of Maltose O-Acetyltransferase From
Bacillus Anthracis
pdb|3IGJ|A Chain A, Crystal Structure Of Maltose O-Acetyltransferase Complexed
With Acetyl Coenzyme A From Bacillus Anthracis
pdb|3IGJ|B Chain B, Crystal Structure Of Maltose O-Acetyltransferase Complexed
With Acetyl Coenzyme A From Bacillus Anthracis
pdb|3IGJ|C Chain C, Crystal Structure Of Maltose O-Acetyltransferase Complexed
With Acetyl Coenzyme A From Bacillus Anthracis
Length = 190
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 73 HPTSIVHPNAIIGQGVSVGPFCTIGSAAKLGDGCLLYPSSHIFGNTELGDHCILMTGAVV 132
HP V N+ G G IG+ +G G ++ P I GD+ ++ +GAVV
Sbjct: 118 HPLHPVERNS----GKEYGKPVKIGNNVWVGGGAIINPGVSI------GDNAVIASGAVV 167
Query: 133 GDDLPGQTVFGCN 145
D+P V G N
Sbjct: 168 TKDVPNNVVVGGN 180
>pdb|1OCX|A Chain A, E. Coli Maltose-O-Acetyltransferase
pdb|1OCX|B Chain B, E. Coli Maltose-O-Acetyltransferase
pdb|1OCX|C Chain C, E. Coli Maltose-O-Acetyltransferase
Length = 182
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 73 HPTSIVHPNAIIGQGVSVGPFCTIGSAAKLGDGCLLYPSSHIFGNTELGDHCILMTGAVV 132
HP V N+ G +G TIG+ +G ++ P I GD+ ++ +GAVV
Sbjct: 112 HPIDPVARNS----GAELGKPVTIGNNVWIGGRAVINPGVTI------GDNVVVASGAVV 161
Query: 133 GDDLPGQTVFGCN 145
D+P V G N
Sbjct: 162 TKDVPDNVVVGGN 174
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 101 KLGDGCLLYPSSHIFGNTELGDHCILMTGAVVGDDLPGQTVFGCNNIIGHHAVV 154
++GD C+L P HI+ T D +GA +G + G N IG AV+
Sbjct: 94 RIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPV----TIGNNVWIGGRAVI 143
>pdb|1V3W|A Chain A, Structure Of Ferripyochelin Binding Protein From
Pyrococcus Horikoshii Ot3
pdb|1V67|A Chain A, Structure Of Ferripyochelin Binding Protein From
Pyrococcus Horikoshii Ot3
pdb|2FKO|A Chain A, Structure Of Ph1591 From Pyrococcus Horikoshii Ot3
Length = 173
Score = 32.0 bits (71), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 85 GQGVSVGPFCTIGS-----AAKLGDGCLLYPSSHIFGNTELGDHCILMTGAVV 132
G +G + TIG AK+G+ ++ SS I ++GDH I+ GAVV
Sbjct: 69 GYPTEIGEYVTIGHNAMVHGAKVGNYVIIGISSVILDGAKIGDHVIIGAGAVV 121
>pdb|3R8Y|A Chain A, Structure Of The Bacillus Anthracis Tetrahydropicolinate
Succinyltransferase
pdb|3R8Y|B Chain B, Structure Of The Bacillus Anthracis Tetrahydropicolinate
Succinyltransferase
pdb|3R8Y|C Chain C, Structure Of The Bacillus Anthracis Tetrahydropicolinate
Succinyltransferase
pdb|3R8Y|D Chain D, Structure Of The Bacillus Anthracis Tetrahydropicolinate
Succinyltransferase
pdb|3R8Y|E Chain E, Structure Of The Bacillus Anthracis Tetrahydropicolinate
Succinyltransferase
pdb|3R8Y|F Chain F, Structure Of The Bacillus Anthracis Tetrahydropicolinate
Succinyltransferase
Length = 240
Score = 31.6 bits (70), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Query: 171 VDVGNNNEFREHVSIHRSSKSGDRTVIGDNNLIMGSCHIAHDCKIGNYNIFAN--NTLLA 228
V++G+N + +I+ + G+ ++I N ++ G + +C +G + A A
Sbjct: 104 VEIGDNAVIMMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSA 163
Query: 229 GHVVVEDYTHTAGAIVIHQFCXXXXXXXXXXXXXXXQDVPKYSMVAGERA 278
V+VED +V+ + +DVP Y++VAG A
Sbjct: 164 KPVIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVVTEDVPPYTVVAGTPA 213
>pdb|3IXC|A Chain A, Crystal Structure Of Hexapeptide Transferase Family
Protein From Anaplasma Phagocytophilum
Length = 191
Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 166 GDECFVDVGNNNEFREHVSIHRSSKSGDRTVIGDNNLIMGSCHIAHDCKIGNYNIFANNT 225
GD ++VG +++ +H S GD TVIG I SC I H C +GN +
Sbjct: 68 GDVDKIEVGEGTNIQDNTVVHTDSMHGD-TVIGKFVTIGHSC-ILHACTLGNNAFVGMGS 125
Query: 226 LLAGHVVVEDYTHTA 240
++ V+E+ + A
Sbjct: 126 IVMDRAVMEEGSMLA 140
>pdb|3TV0|A Chain A, Structure Of Dynactin P27 Subunit
pdb|3TV0|B Chain B, Structure Of Dynactin P27 Subunit
Length = 194
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 11/141 (7%)
Query: 98 SAAKLGDGCLLYPSSHIFGNTELGDHCILMTGAVVGDDLPGQTVFGCNNIIGHHAVVGVK 157
+ K+ G ++ S I G+ +G ++ A + + G V G N+I A++
Sbjct: 11 KSVKIAPGAVVCVESEIRGDVTIGPRTVIHPKARIIAEA-GPIVIGEGNLIEEQALIINA 69
Query: 158 CQD---MKYKSGDECFVDVGNNNEFREHVSIHRSSKSGDRTVI------GDNNLIMGSCH 208
D + + + +G NN F E ++ K GD VI G N ++ C
Sbjct: 70 YPDNITPDTEDPEPKPMIIGTNNVF-EVGCYSQAMKMGDNNVIESKAYVGRNVILTSGCI 128
Query: 209 IAHDCKIGNYNIFANNTLLAG 229
I C + + + NT++ G
Sbjct: 129 IGACCNLNTFEVIPENTVIYG 149
>pdb|3VNP|A Chain A, Crystal Structure Of Hypothetical Protein (Gk2848) From
Geobacillus Kaustophilus
pdb|3VNP|B Chain B, Crystal Structure Of Hypothetical Protein (Gk2848) From
Geobacillus Kaustophilus
pdb|3VNP|C Chain C, Crystal Structure Of Hypothetical Protein (Gk2848) From
Geobacillus Kaustophilus
Length = 183
Score = 30.8 bits (68), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 75 TSIVHPNAIIGQGVSVGPFCTIGSAAKLGDGCLLYPSSHIFGNT 118
++IV NA+IG G + IG A +G G L+ P I NT
Sbjct: 88 SAIVRKNALIGMGSIILDRAEIGEGAFIGAGSLVPPGKKIPPNT 131
>pdb|3MQG|A Chain A, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Acetyl-Coa
pdb|3MQG|B Chain B, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Acetyl-Coa
pdb|3MQG|C Chain C, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Acetyl-Coa
pdb|3MQG|D Chain D, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Acetyl-Coa
pdb|3MQG|E Chain E, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Acetyl-Coa
pdb|3MQG|F Chain F, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Acetyl-Coa
pdb|3MQH|A Chain A, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Coa And
Udp-3-Amino-2-Acetamido-2,3- Glucuronic Acid
pdb|3MQH|B Chain B, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Coa And
Udp-3-Amino-2-Acetamido-2,3- Glucuronic Acid
pdb|3MQH|C Chain C, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Coa And
Udp-3-Amino-2-Acetamido-2,3- Glucuronic Acid
pdb|3MQH|D Chain D, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Coa And
Udp-3-Amino-2-Acetamido-2,3- Glucuronic Acid
pdb|3MQH|E Chain E, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Coa And
Udp-3-Amino-2-Acetamido-2,3- Glucuronic Acid
pdb|3MQH|F Chain F, Crystal Structure Of The 3-N-Acetyl Transferase Wlbb From
Bo Petrii In Complex With Coa And
Udp-3-Amino-2-Acetamido-2,3- Glucuronic Acid
Length = 192
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 72 IHPTSIVHPNAIIGQGVSVGPFCTIGSAAKLGDGCLLYPSSHIFGNTELGDHCILMTGAV 131
IHPT+IV A IG + + I A++G+GC L + + +G+ +
Sbjct: 6 IHPTAIVDEGARIGAHSRIWHWVHICGGAEIGEGCSLGQNVFVGNRVRIGNRVKIQNNVS 65
Query: 132 VGDDL 136
V D++
Sbjct: 66 VYDNV 70
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 64/164 (39%), Gaps = 33/164 (20%)
Query: 76 SIVHPNAIIGQGVSVGPFCTIGSAAKLGDGCLLYPSSHIFGNTELGDHCILMTGAVVGDD 135
+ +HP AI+ +G A++G ++ HI G E+G+ C L
Sbjct: 4 ATIHPTAIVDEG------------ARIGAHSRIWHWVHICGGAEIGEGCSL--------- 42
Query: 136 LPGQTVFGCNNI-IGHHAVV--GVKCQDMKYKSGDE-CFVDVGNNNEFREHVSIHRSSKS 191
GQ VF N + IG+ + V D + D C + N + +I R S+
Sbjct: 43 --GQNVFVGNRVRIGNRVKIQNNVSVYDNVFLEDDVFCGPSMVFTNVYNPRAAIERKSEY 100
Query: 192 GDRTVIGDNNLIMGSCHIAHDCKIGNYNIFANNTLLAGHVVVED 235
D T++ + +C + IG Y AG VV +D
Sbjct: 101 RD-TIVRQGATLGANCTVVCGATIGRYAFVG-----AGAVVNKD 138
>pdb|3KWC|A Chain A, Oxidized, Active Structure Of The Beta-carboxysomal
Gamma-carbonic Anhydrase, Ccmm
pdb|3KWC|B Chain B, Oxidized, Active Structure Of The Beta-carboxysomal
Gamma-carbonic Anhydrase, Ccmm
pdb|3KWC|C Chain C, Oxidized, Active Structure Of The Beta-carboxysomal
Gamma-carbonic Anhydrase, Ccmm
pdb|3KWC|D Chain D, Oxidized, Active Structure Of The Beta-carboxysomal
Gamma-carbonic Anhydrase, Ccmm
pdb|3KWC|E Chain E, Oxidized, Active Structure Of The Beta-carboxysomal
Gamma-carbonic Anhydrase, Ccmm
pdb|3KWC|F Chain F, Oxidized, Active Structure Of The Beta-carboxysomal
Gamma-carbonic Anhydrase, Ccmm
Length = 229
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 84 IGQGVSVGPFCTIGSAAKLGDGCLLYPSSHIFGNTELGDHCILMTGAVVGD 134
IG VS+ I A +GDGC + S +F N +G C++M ++ D
Sbjct: 114 IGDNVSITHMALIHGPAYIGDGCFIGFRSTVF-NARVGAGCVVMMHVLIQD 163
>pdb|3FOQ|A Chain A, Crystal Structure Of N-Acetylglucosamine-1-Phosphate
Uridyltransferase (Glmu) From Mycobacterium Tuberculosis
In A Cubic Space Group
Length = 503
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 102 LGDGCLLYPSSHIFGNTELGDHCIL-----MTGAVVGDDLPGQTVFGCNNIIGHHAVVG 155
+G +++P + + G T++G C++ +T VGD G ++ IG A VG
Sbjct: 288 IGRDTVIHPGTQLLGRTQIGGRCVVGPDTTLTDVAVGDGASVVRTHGSSSSIGDGAAVG 346
>pdb|3SPT|A Chain A, Crystal Structure Of Glmu From Mycobacterium Tuberculosis
In Complex With Acetyl Coenzyme A And
Uridine-Diphosphate-N-Acetylglucosamine
pdb|3ST8|A Chain A, Crystal Structure Of Glmu From Mycobacterium Tuberculosis
In Complex With Coenzyme A, Glucosamine 1-Phosphate And
Uridine-Diphosphate-N- Acetylglucosamine
Length = 501
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 102 LGDGCLLYPSSHIFGNTELGDHCIL-----MTGAVVGDDLPGQTVFGCNNIIGHHAVVG 155
+G +++P + + G T++G C++ +T VGD G ++ IG A VG
Sbjct: 286 IGRDTVIHPGTQLLGRTQIGGRCVVGPDTTLTDVAVGDGASVVRTHGSSSSIGDGAAVG 344
>pdb|3D8V|A Chain A, Crystal Structure Of Glmu From Mycobacterium Tuberculosis
In Complex With Uridine-Diphosphate-N-Acetylglucosamine
pdb|3D98|A Chain A, Crystal Structure Of Glmu From Mycobacterium Tuberculosis,
Ligand-Free Form
pdb|3DJ4|A Chain A, Crystal Structure Of Glmu From Mycobacterium Tuberculosis
In Complex With Uridine-Diphosphate-N-Acetylglucosamine.
pdb|3DK5|A Chain A, Crystal Structure Of Apo-Glmu From Mycobacterium
Tuberculosis
Length = 495
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 102 LGDGCLLYPSSHIFGNTELGDHCIL-----MTGAVVGDDLPGQTVFGCNNIIGHHAVVG 155
+G +++P + + G T++G C++ +T VGD G ++ IG A VG
Sbjct: 280 IGRDTVIHPGTQLLGRTQIGGRCVVGPDTTLTDVAVGDGASVVRTHGSSSSIGDGAAVG 338
>pdb|3KWD|A Chain A, Inactive Truncation Of The Beta-Carboxysomal
Gamma-Carbonic Anhydrase, Ccmm, Form 1
pdb|3KWE|A Chain A, Inactive Truncation Of The Beta-Carboxysomal
Gamma-Carbonic Anhydrase, Ccmm, Form 2
Length = 213
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 84 IGQGVSVGPFCTIGSAAKLGDGCLLYPSSHIFGNTELGDHCILMTGAVVGD 134
IG VS+ I A +GDGC + S +F N +G C++M ++ D
Sbjct: 114 IGDNVSITHMALIHGPAYIGDGCFIGFRSTVF-NARVGAGCVVMMHVLIQD 163
>pdb|2IC7|A Chain A, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus
pdb|2IC7|B Chain B, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus
pdb|2IC7|C Chain C, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus
pdb|2P2O|A Chain A, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus P2(1) Crystal Form
pdb|2P2O|B Chain B, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus P2(1) Crystal Form
pdb|2P2O|C Chain C, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus P2(1) Crystal Form
pdb|2P2O|D Chain D, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus P2(1) Crystal Form
pdb|2P2O|E Chain E, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus P2(1) Crystal Form
pdb|2P2O|F Chain F, Crystal Structure Of Maltose Transacetylase From
Geobacillus Kaustophilus P2(1) Crystal Form
Length = 185
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 86 QGVSVGPFCTIGSAAKLGDGCLLYPSSHIFGNTELGDHCILMTGAVVGDDLPGQTVFGCN 145
G+ G IG +G ++ P I GD+ ++ +GAVV D+P V G N
Sbjct: 123 SGLEYGKPVVIGHNVWIGGRAVINPGVTI------GDNAVIASGAVVTKDVPANAVVGGN 176
>pdb|3SRT|A Chain A, The Crystal Structure Of A Maltose O-Acetyltransferase
From Clostridium Difficile 630
pdb|3SRT|B Chain B, The Crystal Structure Of A Maltose O-Acetyltransferase
From Clostridium Difficile 630
pdb|4ISX|A Chain A, The Crystal Structure Of Maltose O-acetyltransferase From
Clostridium Difficile 630 In Complex With Acetyl-coa
pdb|4ISX|B Chain B, The Crystal Structure Of Maltose O-acetyltransferase From
Clostridium Difficile 630 In Complex With Acetyl-coa
Length = 188
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 87 GVSVGPFCTIGSAAKLGDGCLLYPSSHIFGNTELGDHCILMTGAVVGDDLPGQTV 141
G+ G IG +G G ++ P I GD+ ++ G+VV D+P TV
Sbjct: 126 GIEYGSPVKIGDNVWIGGGVIITPGITI------GDNVVIGAGSVVTKDIPPNTV 174
>pdb|2QKX|A Chain A, N-Acetyl Glucosamine 1-Phosphate Uridyltransferase From
Mycobacterium Tuberculosis Complex With N-Acetyl
Glucosamine 1-Phosphate
Length = 391
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 102 LGDGCLLYPSSHIFGNTELGDHCIL-----MTGAVVGDDLPGQTVFGCNNIIGHHAVVG 155
+G +++P + + G T++G C++ +T VGD G ++ IG A VG
Sbjct: 282 IGRDTVIHPGTQLLGRTQIGGRCVVGPDTTLTDVAVGDGASVVRTHGSSSSIGDGAAVG 340
>pdb|3TIO|A Chain A, Crystal Structures Of Yrda From Escherichia Coli, A
Homologous Protein Of Gamma-Class Carbonic Anhydrase,
Show Possible Allosteric Conformations
pdb|3TIO|B Chain B, Crystal Structures Of Yrda From Escherichia Coli, A
Homologous Protein Of Gamma-Class Carbonic Anhydrase,
Show Possible Allosteric Conformations
pdb|3TIO|C Chain C, Crystal Structures Of Yrda From Escherichia Coli, A
Homologous Protein Of Gamma-Class Carbonic Anhydrase,
Show Possible Allosteric Conformations
pdb|3TIO|D Chain D, Crystal Structures Of Yrda From Escherichia Coli, A
Homologous Protein Of Gamma-Class Carbonic Anhydrase,
Show Possible Allosteric Conformations
pdb|3TIO|E Chain E, Crystal Structures Of Yrda From Escherichia Coli, A
Homologous Protein Of Gamma-Class Carbonic Anhydrase,
Show Possible Allosteric Conformations
pdb|3TIO|F Chain F, Crystal Structures Of Yrda From Escherichia Coli, A
Homologous Protein Of Gamma-Class Carbonic Anhydrase,
Show Possible Allosteric Conformations
pdb|3TIS|A Chain A, Crystal Structures Of Yrda From Escherichia Coli, A
Homologous Protein Of Gamma-Class Carbonic Anhydrases,
Show Possible Allosteric Conformations
pdb|3TIS|B Chain B, Crystal Structures Of Yrda From Escherichia Coli, A
Homologous Protein Of Gamma-Class Carbonic Anhydrases,
Show Possible Allosteric Conformations
pdb|3TIS|C Chain C, Crystal Structures Of Yrda From Escherichia Coli, A
Homologous Protein Of Gamma-Class Carbonic Anhydrases,
Show Possible Allosteric Conformations
Length = 183
Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 166 GDECFVDVGNNNEFREHVSIHRSSKS-----GDRTVIGDNNLIMGSCHIAHDCKIGNYNI 220
GD +V +G ++ +H + KS G+ IG++ + +G + H C IGN +
Sbjct: 46 GDVHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGED-VTVGHKVMLHGCTIGNRVL 104
Query: 221 FA-NNTLLAGHVVVEDYTHTAGAIV 244
+ LL G +V +D AG++V
Sbjct: 105 VGMGSILLDGAIVEDDVMIGAGSLV 129
>pdb|1HM9|A Chain A, Crystal Structure Of S.Pneumoniae
N-Acetylglucosamine-1-Phosphate Uridyltransferase, Glmu,
Bound To Acetyl Coenzyme A And Udp-N- Acetylglucosamine
pdb|1HM9|B Chain B, Crystal Structure Of S.Pneumoniae
N-Acetylglucosamine-1-Phosphate Uridyltransferase, Glmu,
Bound To Acetyl Coenzyme A And Udp-N- Acetylglucosamine
pdb|1HM8|A Chain A, Crystal Structure Of S.Pneumoniae
N-Acetylglucosamine-1-Phosphate Uridyltransferase, Glmu,
Bound To Acetyl Coenzyme A
pdb|1HM8|B Chain B, Crystal Structure Of S.Pneumoniae
N-Acetylglucosamine-1-Phosphate Uridyltransferase, Glmu,
Bound To Acetyl Coenzyme A
pdb|1HM0|A Chain A, Crystal Structure Of S.Pneumoniae N-Acetylglucosamine
1-Phosphate Uridyltransferase, Glmu
pdb|1HM0|B Chain B, Crystal Structure Of S.Pneumoniae N-Acetylglucosamine
1-Phosphate Uridyltransferase, Glmu
Length = 468
Score = 28.1 bits (61), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 102 LGDGCLLYPSSHIFGNTELGDHCILMTGAVVGDDLPGQTV 141
+GD + +S I ELGD+ ++ G+ + D+P +
Sbjct: 405 IGDNVFVGSNSTIIAPVELGDNSLVGAGSTITKDVPADAI 444
Score = 27.7 bits (60), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 25/145 (17%)
Query: 100 AKLGDGCLLYPSSHIFGNTELGDHCILMTGAVVGDDLPGQTVFGCNNIIGHHAVVGVKCQ 159
+ + DG + P +HI N+ LG + G V ++ G ++ G N GH +G C+
Sbjct: 326 SSVADGVTVGPYAHIRPNSSLGAQVHI--GNFV--EVKGSSI-GENTKAGHLTYIG-NCE 379
Query: 160 DMKYKSGDECFVDVGNNNEFRE-HVSIHRSSKSGDRTVIGDNNLIMGSCHIAHDCKIGNY 218
VG+N F ++++ K+ +TVIGDN + + I ++G+
Sbjct: 380 -------------VGSNVNFGAGTITVNYDGKNKYKTVIGDNVFVGSNSTIIAPVELGD- 425
Query: 219 NIFANNTLLAGHVVVEDYTHTAGAI 243
N+ + AG + +D A AI
Sbjct: 426 ----NSLVGAGSTITKDVPADAIAI 446
>pdb|4AAW|A Chain A, S.Pneumoniae Glmu In Complex With An Antibacterial
Inhibitor
pdb|4AC3|A Chain A, S.Pneumoniae Glmu In Complex With An Antibacterial
Inhibitor
Length = 459
Score = 28.1 bits (61), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 102 LGDGCLLYPSSHIFGNTELGDHCILMTGAVVGDDLPGQTV 141
+GD + +S I ELGD+ ++ G+ + D+P +
Sbjct: 396 IGDNVFVGSNSTIIAPVELGDNSLVGAGSTITKDVPADAI 435
Score = 27.7 bits (60), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 25/145 (17%)
Query: 100 AKLGDGCLLYPSSHIFGNTELGDHCILMTGAVVGDDLPGQTVFGCNNIIGHHAVVGVKCQ 159
+ + DG + P +HI N+ LG + G V ++ G ++ G N GH +G C+
Sbjct: 317 SSVADGVTVGPYAHIRPNSSLGAQVHI--GNFV--EVKGSSI-GENTKAGHLTYIG-NCE 370
Query: 160 DMKYKSGDECFVDVGNNNEFRE-HVSIHRSSKSGDRTVIGDNNLIMGSCHIAHDCKIGNY 218
VG+N F ++++ K+ +TVIGDN + + I ++G+
Sbjct: 371 -------------VGSNVNFGAGTITVNYDGKNKYKTVIGDNVFVGSNSTIIAPVELGD- 416
Query: 219 NIFANNTLLAGHVVVEDYTHTAGAI 243
N+ + AG + +D A AI
Sbjct: 417 ----NSLVGAGSTITKDVPADAIAI 437
>pdb|3OU9|A Chain A, Crystal Structure Of Gamma-Carbonic Anhydrase W19f Mutant
From Methanosarcina Thermophila
Length = 213
Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 61/169 (36%), Gaps = 19/169 (11%)
Query: 90 VGPFCTIGSAAKLGDGCLLYPSSHIFGNTELGDHCILMTGAVVGDDLPGQTVF-----GC 144
V PF SA + + P + + G +G + ++ A + D G +F
Sbjct: 16 VTPFNPEPSAPVIDPTAYIDPQASVIGEVTIGANVMVSPMASIRSDE-GMPIFVGDRSNV 74
Query: 145 NNIIGHHAVVGVKCQDMKYKS------GDECFVDVGNNNEFREHVSIHRSSKSGDRTVIG 198
+ + HA+ + + + G E V +GNN +H + GD T IG
Sbjct: 75 QDGVVLHALETINEEGEPIEDNIVEVDGKEYAVYIGNNVSLAHQSQVHGPAAVGDDTFIG 134
Query: 199 DNNLIMGSCHIAHDCKIGNYNIFANNTLLAGHVVVEDYTHTAGAIVIHQ 247
+ S K+GN + + G + + AG +V Q
Sbjct: 135 MQAFVFKS-------KVGNNCVLEPRSAAIGVTIPDGRYIPAGMVVTSQ 176
>pdb|2V0H|A Chain A, Characterization Of Substrate Binding And Catalysis Of The
Potential Antibacterial Target N-Acetylglucosamine-1-
Phosphate Uridyltransferase (Glmu)
pdb|2V0I|A Chain A, Characterization Of Substrate Binding And Catalysis Of The
Potential Antibacterial Target N-Acetylglucosamine-1-
Phosphate Uridyltransferase (Glmu)
pdb|2V0J|A Chain A, Characterization Of Substrate Binding And Catalysis Of The
Potential Antibacterial Target N-acetylglucosamine-1-
Phosphate Uridyltransferase (glmu)
pdb|2V0K|A Chain A, Characterization Of Substrate Binding And Catalysis Of The
Potential Antibacterial Target N-Acetylglucosamine-1-
Phosphate Uridyltransferase (Glmu)
pdb|2V0L|A Chain A, Characterization Of Substrate Binding And Catalysis Of The
Potential Antibacterial Target N-Acetylglucosamine-1-
Phosphate Uridyltransferase (Glmu)
pdb|2VD4|A Chain A, Structure Of Small-Molecule Inhibitor Of Glmu From
Haemophilus Influenzae Reveals An Allosteric Binding
Site
pdb|2W0V|A Chain A, Crystal Structure Of Glmu From Haemophilus Influenzae In
Complex With Quinazoline Inhibitor 1
pdb|2W0W|A Chain A, Crystal Structure Of Glmu From Haemophilus Influenzae In
Complex With Quinazoline Inhibitor 2
Length = 456
Score = 27.7 bits (60), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 15/146 (10%)
Query: 72 IHPTSIVHPNAIIGQGVSVGPFCTIGSAAKLGDGCLLYPSSHIFGNTELGDHCILMTGAV 131
I P S++ ++I+G+ ++GPF ++L G L +H+ E+ + V
Sbjct: 309 IKPYSVLE-DSIVGEKAAIGPF------SRLRPGAELAAETHVGNFVEIKKSTVGKGSKV 361
Query: 132 VGDDLPGQTVFGCNNIIGHHAVVGVKCQDMKYKS--GDECFVDVGNNNEFREHVSIHRSS 189
G + G N IG + K+K+ GD+ F VG++ + V + +
Sbjct: 362 NHLTYVGDSEIGSNCNIGAGVITCNYDGANKFKTIIGDDVF--VGSDTQLVAPVKVANGA 419
Query: 190 KSGDRTVI----GDNNLIMGSCHIAH 211
G T I G+N L++ H
Sbjct: 420 TIGAGTTITRDVGENELVITRVAQRH 445
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,890,159
Number of Sequences: 62578
Number of extensions: 296426
Number of successful extensions: 796
Number of sequences better than 100.0: 69
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 554
Number of HSP's gapped (non-prelim): 153
length of query: 300
length of database: 14,973,337
effective HSP length: 98
effective length of query: 202
effective length of database: 8,840,693
effective search space: 1785819986
effective search space used: 1785819986
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)