BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040781
(316 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1ZGK|A Chain A, 1.35 Angstrom Structure Of The Kelch Domain Of Keap1
Length = 308
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 11/73 (15%)
Query: 165 DFEDDPLAVEMYSVDTRTWEICQSMPAVLKDSAASTWLSVAVNSRQLYVTEKYSGITV-- 222
D +D +VE Y V+T TW P + SA L + V+ ++YV Y G T
Sbjct: 225 DGQDQLNSVERYDVETETWTFV--APXKHRRSA----LGITVHQGRIYVLGGYDGHTFLD 278
Query: 223 ---SFDPSTKGWS 232
+DP T WS
Sbjct: 279 SVECYDPDTDTWS 291
>pdb|1U6D|X Chain X, Crystal Structure Of The Kelch Domain Of Human Keap1
pdb|2FLU|X Chain X, Crystal Structure Of The Kelch-Neh2 Complex
Length = 308
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 11/73 (15%)
Query: 165 DFEDDPLAVEMYSVDTRTWEICQSMPAVLKDSAASTWLSVAVNSRQLYVTEKYSGITV-- 222
D +D +VE Y V+T TW M + SA L + V+ ++YV Y G T
Sbjct: 225 DGQDQLNSVERYDVETETWTFVAPMKH--RRSA----LGITVHQGRIYVLGGYDGHTFLD 278
Query: 223 ---SFDPSTKGWS 232
+DP T WS
Sbjct: 279 SVECYDPDTDTWS 291
>pdb|3VNG|A Chain A, Crystal Structure Of Keap1 In Complex With Synthetic Small
Molecular Based On A Co-crystallization
pdb|3VNH|A Chain A, Crystal Structure Of Keap1 Soaked With Synthetic Small
Molecular
Length = 309
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 11/73 (15%)
Query: 165 DFEDDPLAVEMYSVDTRTWEICQSMPAVLKDSAASTWLSVAVNSRQLYVTEKYSGITV-- 222
D +D +VE Y V+T TW M + SA L + V+ ++YV Y G T
Sbjct: 226 DGQDQLNSVERYDVETETWTFVAPMKH--RRSA----LGITVHQGRIYVLGGYDGHTFLD 279
Query: 223 ---SFDPSTKGWS 232
+DP T WS
Sbjct: 280 SVECYDPDTDTWS 292
>pdb|1L9S|A Chain A, Crystal Structure Of The I257t Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
pdb|1L9S|B Chain B, Crystal Structure Of The I257t Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
pdb|1L9S|C Chain C, Crystal Structure Of The I257t Variant Of The Copper-
Containing Nitrite Reductase From Alcaligenes Faecalis
S-6
Length = 341
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 8/59 (13%)
Query: 66 LLLHTQSQRTMAPYLTTAHAYDARSHVWIEIKNNQPSSFD----FLLRSSHSTLLYTLS 120
L++H+Q+ R P+LT H +VW K N P D F+ + YT
Sbjct: 239 LIVHSQANRDTRPHLTGGHG----DYVWATGKFNTPPDVDQETWFIPGGAAGAAFYTFQ 293
>pdb|2DYH|A Chain A, Crystal Structure Of The Keap1 Protein In Complexed With
The N-Terminal Region Of The Nrf2 Transcription Factor
pdb|2Z32|A Chain A, Crystal Structure Of Keap1 Complexed With Prothymosin
Alpha
pdb|3ADE|A Chain A, Crystal Structure Of Keap1 In Complex With Sequestosome-
1P62
Length = 318
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 11/73 (15%)
Query: 165 DFEDDPLAVEMYSVDTRTWEICQSMPAVLKDSAASTWLSVAVNSRQLYVTEKYSGITV-- 222
D +D +VE Y V+T TW M + L + V+ ++YV Y G T
Sbjct: 219 DGQDQLNSVERYDVETETWTFVAPM------RHHRSALGITVHQGKIYVLGGYDGHTFLD 272
Query: 223 ---SFDPSTKGWS 232
+DP + WS
Sbjct: 273 SVECYDPDSDTWS 285
>pdb|1X2J|A Chain A, Structural Basis For The Defects Of Human Lung Cancer
Somatic Mutations In The Repression Activity Of Keap1 On
Nrf2
pdb|1X2R|A Chain A, Structural Basis For The Defects Of Human Lung Cancer
Somatic Mutations In The Repression Activity Of Keap1 On
Nrf2
Length = 316
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 11/73 (15%)
Query: 165 DFEDDPLAVEMYSVDTRTWEICQSMPAVLKDSAASTWLSVAVNSRQLYVTEKYSGITV-- 222
D +D +VE Y V+T TW M + L + V+ ++YV Y G T
Sbjct: 218 DGQDQLNSVERYDVETETWTFVAPM------RHHRSALGITVHQGKIYVLGGYDGHTFLD 271
Query: 223 ---SFDPSTKGWS 232
+DP + WS
Sbjct: 272 SVECYDPDSDTWS 284
>pdb|1G8J|B Chain B, Crystal Structure Analysis Of Arsenite Oxidase From
Alcaligenes Faecalis
pdb|1G8J|D Chain D, Crystal Structure Analysis Of Arsenite Oxidase From
Alcaligenes Faecalis
Length = 133
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 219 GITVSFDPSTKGWSGPFHLRQFDHEK 244
G S+D S+K +S P H +FD EK
Sbjct: 64 GCPTSYDSSSKTFSCPCHFTEFDAEK 89
>pdb|1G8K|B Chain B, Crystal Structure Analysis Of Arsenite Oxidase From
Alcaligenes Faecalis
pdb|1G8K|D Chain D, Crystal Structure Analysis Of Arsenite Oxidase From
Alcaligenes Faecalis
pdb|1G8K|F Chain F, Crystal Structure Analysis Of Arsenite Oxidase From
Alcaligenes Faecalis
pdb|1G8K|H Chain H, Crystal Structure Analysis Of Arsenite Oxidase From
Alcaligenes Faecalis
Length = 133
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 219 GITVSFDPSTKGWSGPFHLRQFDHEK 244
G S+D S+K +S P H +FD EK
Sbjct: 64 GCPTSYDSSSKTFSCPCHFTEFDAEK 89
>pdb|3LMS|A Chain A, Structure Of Human Activated Thrombin-Activatable
Fibrinolys Inhibitor, Tafia, In Complex With
Tick-Derived Funnelin Inh Tci
Length = 309
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 50 RAVFSSLRR-VNKIKPWLLLHTQSQRTMAPYLTT 82
+AV S LRR +N+IK ++ +H+ SQ + PY T
Sbjct: 176 KAVASFLRRNINQIKAYISMHSYSQHIVFPYSYT 209
>pdb|3D68|A Chain A, Crystal Structure Of A T325i/t329i/h333y/h335q Mutant Of
Thrombin- Activatable Fibrinolysis Inhibitor (tafi-iiyq)
pdb|3D68|B Chain B, Crystal Structure Of A T325i/t329i/h333y/h335q Mutant Of
Thrombin- Activatable Fibrinolysis Inhibitor (tafi-iiyq)
pdb|3D68|C Chain C, Crystal Structure Of A T325i/t329i/h333y/h335q Mutant Of
Thrombin- Activatable Fibrinolysis Inhibitor (tafi-iiyq)
Length = 424
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 50 RAVFSSLRR-VNKIKPWLLLHTQSQRTMAPYLTT 82
+AV S LRR +N+IK ++ +H+ SQ + PY T
Sbjct: 291 KAVASFLRRNINQIKAYISMHSYSQHIVFPYSYT 324
>pdb|3D66|A Chain A, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3D66|B Chain B, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3D66|C Chain C, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3D67|A Chain A, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi) In Complex With
2-Guanidino-Ethyl-Mercaptosuccinic Acid (Gemsa)
pdb|3D67|B Chain B, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi) In Complex With
2-Guanidino-Ethyl-Mercaptosuccinic Acid (Gemsa)
pdb|3D67|C Chain C, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi) In Complex With
2-Guanidino-Ethyl-Mercaptosuccinic Acid (Gemsa)
Length = 424
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 50 RAVFSSLRR-VNKIKPWLLLHTQSQRTMAPYLTT 82
+AV S LRR +N+IK ++ +H+ SQ + PY T
Sbjct: 291 KAVASFLRRNINQIKAYISMHSYSQHIVFPYSYT 324
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.131 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,240,063
Number of Sequences: 62578
Number of extensions: 342522
Number of successful extensions: 823
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 821
Number of HSP's gapped (non-prelim): 14
length of query: 316
length of database: 14,973,337
effective HSP length: 99
effective length of query: 217
effective length of database: 8,778,115
effective search space: 1904850955
effective search space used: 1904850955
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)