BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040782
(435 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225439757|ref|XP_002274790.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Vitis vinifera]
Length = 420
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/435 (83%), Positives = 397/435 (91%), Gaps = 15/435 (3%)
Query: 1 MADKKLKQKRRRPDPTSDDESELPFKNILKPDQAILETLKQLFLAATTTTTAAANGASTS 60
MADKK KRRR DP+ D+ LPF+N LK D+ IL+TLK L ++++++GA+ +
Sbjct: 1 MADKK---KRRRTDPSDSDQQHLPFRNSLKSDEIILQTLKDL------CSSSSSDGATGT 51
Query: 61 SSSSKPLTLSDLSLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASS 120
LTLSDL L++TCREV DLSLS+VQSTIETLIL++ SIL+G GFSF VPSR+S+
Sbjct: 52 ------LTLSDLGLASTCREVADLSLSSVQSTIETLILRLTHSILSGQGFSFSVPSRSSA 105
Query: 121 NQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTD 180
NQLYVPELDRIVLKDK++LRPFA++STVRKS +T +IL LIHQLC +NIHVTKRDLFYTD
Sbjct: 106 NQLYVPELDRIVLKDKSSLRPFANVSTVRKSAVTTRILQLIHQLCTKNIHVTKRDLFYTD 165
Query: 181 VKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGG 240
VKLFQDQTQSD+VLDDV+C+LGCTRSSLNVIA+EKGVVVGRLIFSDNGDMIDCTKMGMGG
Sbjct: 166 VKLFQDQTQSDSVLDDVSCMLGCTRSSLNVIASEKGVVVGRLIFSDNGDMIDCTKMGMGG 225
Query: 241 KAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFL 300
KAIPPNIDRVGDMQSDA+FILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFL
Sbjct: 226 KAIPPNIDRVGDMQSDALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFL 285
Query: 301 RKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY 360
RKMK ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY
Sbjct: 286 RKMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY 345
Query: 361 KIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYL 420
IPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYL
Sbjct: 346 SIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYL 405
Query: 421 SEVYLPLKLQQKDWL 435
SEVYLPLKLQQ+DWL
Sbjct: 406 SEVYLPLKLQQQDWL 420
>gi|15241959|ref|NP_195902.1| DNA topoisomerase 6 subunit A [Arabidopsis thaliana]
gi|297806215|ref|XP_002870991.1| hypothetical protein ARALYDRAFT_487058 [Arabidopsis lyrata subsp.
lyrata]
gi|75335684|sp|Q9LZ03.1|TOP6A_ARATH RecName: Full=DNA topoisomerase 6 subunit A; Short=AtTOP6A;
AltName: Full=Meiotic recombination protein SPO11-3;
Short=AtSPO11-3; AltName: Full=Protein BRASSINOSTEROID
INSENSITIVE 5; AltName: Full=Protein ROOT HAIRLESS 2
gi|15488539|gb|AAL01152.1|AF323679_1 putative topoisomerase VI subunit A [Arabidopsis thaliana]
gi|7413557|emb|CAB86036.1| meiosis specific-like protein [Arabidopsis thaliana]
gi|12331186|emb|CAC24689.1| topoisomerase 6 subunit A [Arabidopsis thaliana]
gi|114213517|gb|ABI54341.1| At5g02820 [Arabidopsis thaliana]
gi|297316828|gb|EFH47250.1| hypothetical protein ARALYDRAFT_487058 [Arabidopsis lyrata subsp.
lyrata]
gi|332003139|gb|AED90522.1| DNA topoisomerase 6 subunit A [Arabidopsis thaliana]
Length = 427
Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/417 (88%), Positives = 393/417 (94%), Gaps = 3/417 (0%)
Query: 19 DESELPFKNILKPDQAILETLKQLFLAATTTTTAAANGASTSSSSSKPLTLSDLSLSATC 78
+ ELPFK+IL+ D I E LK +++ AAA SSSSSKPLTL+DLSLS++C
Sbjct: 14 EAEELPFKSILESDDVITELLKSYI---SSSIKAAAGAGGASSSSSKPLTLADLSLSSSC 70
Query: 79 REVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTT 138
REV DLSLS+VQ+ IET+I+QIARSILAG+GFSF VPSRA+SNQLYVPELDRIVLKDK+T
Sbjct: 71 REVADLSLSSVQTEIETVIVQIARSILAGDGFSFSVPSRAASNQLYVPELDRIVLKDKST 130
Query: 139 LRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVA 198
LRPFAS+S+VRK+TIT +IL+LIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDV+
Sbjct: 131 LRPFASVSSVRKTTITTRILALIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVS 190
Query: 199 CILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAM 258
C+LGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAM
Sbjct: 191 CMLGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAM 250
Query: 259 FILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSD 318
FILLVEKDAAY+RLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSD
Sbjct: 251 FILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSD 310
Query: 319 PYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTG 378
PYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTG
Sbjct: 311 PYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTG 370
Query: 379 KDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
KD+LEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ+DWL
Sbjct: 371 KDMLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQQDWL 427
>gi|297741485|emb|CBI32617.3| unnamed protein product [Vitis vinifera]
Length = 471
Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/435 (83%), Positives = 397/435 (91%), Gaps = 15/435 (3%)
Query: 1 MADKKLKQKRRRPDPTSDDESELPFKNILKPDQAILETLKQLFLAATTTTTAAANGASTS 60
MADKK KRRR DP+ D+ LPF+N LK D+ IL+TLK L ++++++GA+ +
Sbjct: 44 MADKK---KRRRTDPSDSDQQHLPFRNSLKSDEIILQTLKDL------CSSSSSDGATGT 94
Query: 61 SSSSKPLTLSDLSLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASS 120
LTLSDL L++TCREV DLSLS+VQSTIETLIL++ SIL+G GFSF VPSR+S+
Sbjct: 95 ------LTLSDLGLASTCREVADLSLSSVQSTIETLILRLTHSILSGQGFSFSVPSRSSA 148
Query: 121 NQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTD 180
NQLYVPELDRIVLKDK++LRPFA++STVRKS +T +IL LIHQLC +NIHVTKRDLFYTD
Sbjct: 149 NQLYVPELDRIVLKDKSSLRPFANVSTVRKSAVTTRILQLIHQLCTKNIHVTKRDLFYTD 208
Query: 181 VKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGG 240
VKLFQDQTQSD+VLDDV+C+LGCTRSSLNVIA+EKGVVVGRLIFSDNGDMIDCTKMGMGG
Sbjct: 209 VKLFQDQTQSDSVLDDVSCMLGCTRSSLNVIASEKGVVVGRLIFSDNGDMIDCTKMGMGG 268
Query: 241 KAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFL 300
KAIPPNIDRVGDMQSDA+FILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFL
Sbjct: 269 KAIPPNIDRVGDMQSDALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFL 328
Query: 301 RKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY 360
RKMK ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY
Sbjct: 329 RKMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY 388
Query: 361 KIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYL 420
IPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYL
Sbjct: 389 SIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYL 448
Query: 421 SEVYLPLKLQQKDWL 435
SEVYLPLKLQQ+DWL
Sbjct: 449 SEVYLPLKLQQQDWL 463
>gi|449448703|ref|XP_004142105.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Cucumis sativus]
gi|449521501|ref|XP_004167768.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Cucumis sativus]
Length = 420
Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/435 (84%), Positives = 402/435 (92%), Gaps = 15/435 (3%)
Query: 1 MADKKLKQKRRRPDPTSDDESELPFKNILKPDQAILETLKQLFLAATTTTTAAANGASTS 60
MADK+ KRRR + S+DE++LPFKN LKPD IL+ LK+L A+T ++++++
Sbjct: 1 MADKR---KRRRSELNSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSK----- 52
Query: 61 SSSSKPLTLSDLSLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASS 120
TL DL LS++CREVTDLSLS+VQ+TIE++IL+IARSIL+GNGF+F VPSR+ +
Sbjct: 53 -------TLDDLGLSSSCREVTDLSLSSVQATIESVILKIARSILSGNGFAFDVPSRSGA 105
Query: 121 NQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTD 180
NQLYVPELDRIVLKDKT LRP+A++STVRKSTIT +IL L+HQLC++NIHVTKRDLFYTD
Sbjct: 106 NQLYVPELDRIVLKDKTALRPYANISTVRKSTITTRILQLVHQLCIKNIHVTKRDLFYTD 165
Query: 181 VKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGG 240
VKLFQDQTQSD+VLDDV+CILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGG
Sbjct: 166 VKLFQDQTQSDSVLDDVSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGG 225
Query: 241 KAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFL 300
KAIPPNIDRVGDMQSDA+FILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFL
Sbjct: 226 KAIPPNIDRVGDMQSDALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFL 285
Query: 301 RKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY 360
RKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY
Sbjct: 286 RKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY 345
Query: 361 KIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYL 420
KIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEEL+LMVKTKQKAEIQALSSFGFQYL
Sbjct: 346 KIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYL 405
Query: 421 SEVYLPLKLQQKDWL 435
SEVYLPLKLQQKDWL
Sbjct: 406 SEVYLPLKLQQKDWL 420
>gi|255568446|ref|XP_002525197.1| meiotic recombination protein spo11, putative [Ricinus communis]
gi|223535494|gb|EEF37163.1| meiotic recombination protein spo11, putative [Ricinus communis]
Length = 421
Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/435 (85%), Positives = 396/435 (91%), Gaps = 14/435 (3%)
Query: 1 MADKKLKQKRRRPDPTSDDESELPFKNILKPDQAILETLKQLFLAATTTTTAAANGASTS 60
MAD +KRRR DP S +ELPFKN LKPD ILET + +++S
Sbjct: 1 MADTTKSKKRRRADPES--TTELPFKNSLKPDSVILET------------LNSLLQSTSS 46
Query: 61 SSSSKPLTLSDLSLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASS 120
SSSSKPLTLSDLSLSATCREVTDLSLS+VQS IET++L + +SIL+G GFSF VPSRA++
Sbjct: 47 SSSSKPLTLSDLSLSATCREVTDLSLSSVQSVIETVVLSLTQSILSGEGFSFNVPSRAAT 106
Query: 121 NQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTD 180
NQLYVPELDRIVLKDK TLRPFA +S+VRKSTIT KILSL+HQLCL+NIHVTKRDLFYTD
Sbjct: 107 NQLYVPELDRIVLKDKNTLRPFAHISSVRKSTITAKILSLVHQLCLKNIHVTKRDLFYTD 166
Query: 181 VKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGG 240
VKLFQDQTQSDAVLDDV+C+LGCTRSSLNV+AAEKGVVVGRLIFSDNGDMIDCTKMGMGG
Sbjct: 167 VKLFQDQTQSDAVLDDVSCMLGCTRSSLNVVAAEKGVVVGRLIFSDNGDMIDCTKMGMGG 226
Query: 241 KAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFL 300
KAIPPNIDRV DMQSDA+FILLVEKDAAY+RLAEDRFYNRFPCIIVTAKGQPDVATRLFL
Sbjct: 227 KAIPPNIDRVDDMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFL 286
Query: 301 RKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY 360
RKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY
Sbjct: 287 RKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY 346
Query: 361 KIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYL 420
KIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEEL LMVKTKQKAEIQALSSFGFQYL
Sbjct: 347 KIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYL 406
Query: 421 SEVYLPLKLQQKDWL 435
SEVYLPLKLQQ+DWL
Sbjct: 407 SEVYLPLKLQQQDWL 421
>gi|356537457|ref|XP_003537243.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Glycine max]
Length = 419
Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/435 (82%), Positives = 393/435 (90%), Gaps = 16/435 (3%)
Query: 1 MADKKLKQKRRRPDPTSDDESELPFKNILKPDQAILETLKQLFLAATTTTTAAANGASTS 60
MAD K KRRR DP D ELPFKN LKPD AI+ETLKQ ++++++ + +
Sbjct: 1 MADNK---KRRRKDPAGD---ELPFKNKLKPDSAIMETLKQFSASSSSSSASVS------ 48
Query: 61 SSSSKPLTLSDLSLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASS 120
+ LTL DLSL CREV DLSLS+VQS IE+LIL+IA SIL+G+GFSF VPSR+++
Sbjct: 49 ----QTLTLQDLSLPFRCREVADLSLSSVQSNIESLILRIAHSILSGHGFSFDVPSRSAA 104
Query: 121 NQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTD 180
NQLYVPELDRIVLKDK++LRPFA++STVRKS IT +IL LIHQLCL+ IHVTKRDLFYTD
Sbjct: 105 NQLYVPELDRIVLKDKSSLRPFANISTVRKSAITARILQLIHQLCLKGIHVTKRDLFYTD 164
Query: 181 VKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGG 240
VKLFQDQ QSDAVLDDV+C+LGCTRSSLNV+AAEKGVVVGRLIFSDNGDMIDCTKMGMGG
Sbjct: 165 VKLFQDQIQSDAVLDDVSCMLGCTRSSLNVVAAEKGVVVGRLIFSDNGDMIDCTKMGMGG 224
Query: 241 KAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFL 300
KAIPPNIDRVGDMQSDA+FILLVEKDAAY+RLAEDRFYNRFPCIIVTAKGQPDV+TRLFL
Sbjct: 225 KAIPPNIDRVGDMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVSTRLFL 284
Query: 301 RKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY 360
RKMK+ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLG+RPSDLDKY
Sbjct: 285 RKMKIELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGVRPSDLDKY 344
Query: 361 KIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYL 420
KIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEEL LMVKTKQKAEIQALS+FGFQYL
Sbjct: 345 KIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSTFGFQYL 404
Query: 421 SEVYLPLKLQQKDWL 435
SEVYLPLKLQQKDWL
Sbjct: 405 SEVYLPLKLQQKDWL 419
>gi|356548204|ref|XP_003542493.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Glycine max]
Length = 417
Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/435 (82%), Positives = 391/435 (89%), Gaps = 18/435 (4%)
Query: 1 MADKKLKQKRRRPDPTSDDESELPFKNILKPDQAILETLKQLFLAATTTTTAAANGASTS 60
MAD K KRRR DP D ELPFKN LKPD AI+ETLKQ ++++++ +
Sbjct: 1 MADNK---KRRRKDPAGD---ELPFKNKLKPDSAIMETLKQFSASSSSSSVS-------- 46
Query: 61 SSSSKPLTLSDLSLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASS 120
+ LTL DLS+ CREV DLSLS+VQS IE+LIL+IA SIL+G+GFSF VPSR+++
Sbjct: 47 ----QTLTLQDLSIPFRCREVADLSLSSVQSNIESLILRIAHSILSGHGFSFDVPSRSAA 102
Query: 121 NQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTD 180
NQLYVPELDRIVLKDK++LRPFA++STVRKS IT +IL LIHQLC++ IHVTKRDLFYTD
Sbjct: 103 NQLYVPELDRIVLKDKSSLRPFANISTVRKSAITARILQLIHQLCIKGIHVTKRDLFYTD 162
Query: 181 VKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGG 240
VKLFQDQ QSDAVLDDV+C+LGCTRSSLNV+AAEKGVVVGRLIFSDNGDMIDCTKMGMGG
Sbjct: 163 VKLFQDQIQSDAVLDDVSCMLGCTRSSLNVVAAEKGVVVGRLIFSDNGDMIDCTKMGMGG 222
Query: 241 KAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFL 300
KAIPPNIDRVGDMQSDA+FILLVEKDAAY+RLAEDRFYNRFPCIIVTAKGQPDV+TRLFL
Sbjct: 223 KAIPPNIDRVGDMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVSTRLFL 282
Query: 301 RKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY 360
RKMK ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLG+RPSDLDKY
Sbjct: 283 RKMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGVRPSDLDKY 342
Query: 361 KIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYL 420
KIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEEL LMVKTKQKAEIQALS+FGFQYL
Sbjct: 343 KIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSTFGFQYL 402
Query: 421 SEVYLPLKLQQKDWL 435
SEVYLPLKLQQKDWL
Sbjct: 403 SEVYLPLKLQQKDWL 417
>gi|224069320|ref|XP_002326329.1| predicted protein [Populus trichocarpa]
gi|222833522|gb|EEE71999.1| predicted protein [Populus trichocarpa]
Length = 423
Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/428 (84%), Positives = 394/428 (92%), Gaps = 14/428 (3%)
Query: 8 QKRRRPDPTSDDESELPFKNILKPDQAILETLKQLFLAATTTTTAAANGASTSSSSSKPL 67
+KRR+PDP D +EL FKN+LKPD IL+TL+ L ++ + S+SSSKPL
Sbjct: 10 RKRRQPDP--DSTTELLFKNLLKPDSVILQTLQSLVIS------------TASASSSKPL 55
Query: 68 TLSDLSLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPE 127
TLSDLSLS++CREV DLSL++VQS IE L + I +SIL+G GFSF VPSR+++NQLYVPE
Sbjct: 56 TLSDLSLSSSCREVADLSLTSVQSEIEALTISIVQSILSGKGFSFNVPSRSATNQLYVPE 115
Query: 128 LDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQ 187
LDRIVLKDK TLRPFA++S+VRK TIT +ILSLIHQLCL++IHVTKRDLFYTDVKLFQDQ
Sbjct: 116 LDRIVLKDKNTLRPFANISSVRKCTITARILSLIHQLCLKSIHVTKRDLFYTDVKLFQDQ 175
Query: 188 TQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNI 247
TQSDAVLDDV+C+LGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNI
Sbjct: 176 TQSDAVLDDVSCMLGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNI 235
Query: 248 DRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL 307
DRVGDMQSDA+FILLVEKDAAY+RLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMK EL
Sbjct: 236 DRVGDMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKTEL 295
Query: 308 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR 367
KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR
Sbjct: 296 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR 355
Query: 368 LPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPL 427
LPMTEQDIKTGKDLLEEDFVKKNPGWVEEL+LMVKTKQKAEIQALSSFGFQYLSEVYLPL
Sbjct: 356 LPMTEQDIKTGKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPL 415
Query: 428 KLQQKDWL 435
KLQQ+DWL
Sbjct: 416 KLQQQDWL 423
>gi|302807688|ref|XP_002985538.1| hypothetical protein SELMODRAFT_122380 [Selaginella moellendorffii]
gi|300146744|gb|EFJ13412.1| hypothetical protein SELMODRAFT_122380 [Selaginella moellendorffii]
Length = 415
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 297/425 (69%), Positives = 351/425 (82%), Gaps = 13/425 (3%)
Query: 11 RRPDPTSDDESELPFKNILKPDQAILETLKQLFLAATTTTTAAANGASTSSSSSKPLTLS 70
RR + ELP + LK D AIL+T+K A T A G S LS
Sbjct: 4 RRGGDGGNAGGELPKR--LKTDGAILQTIKDF---AEATARAGIRGEKRS--------LS 50
Query: 71 DLSLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDR 130
DL+L +CREV +L V+ IE L+L + +SIL G G ++ VPSR S+NQLYV ELDR
Sbjct: 51 DLALEESCREVAELGSGEVKEEIEKLVLSVTKSILQGQGLAYTVPSRTSANQLYVEELDR 110
Query: 131 IVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQS 190
IVLKDKT++RPFAS STV+K+ IT +IL L+HQLC + IHVTKRDLFYTDVKLF +Q QS
Sbjct: 111 IVLKDKTSIRPFASSSTVKKTAITTRILELVHQLCSKQIHVTKRDLFYTDVKLFTEQAQS 170
Query: 191 DAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRV 250
D VLDDV+C+LGCTR+SLNV+A+EKGVVVGRL+F ++GD IDCTKMG+GGKAIPPNID++
Sbjct: 171 DTVLDDVSCMLGCTRTSLNVVASEKGVVVGRLVFVEDGDRIDCTKMGVGGKAIPPNIDKI 230
Query: 251 GDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLP 310
DM+SDA+FILLVEKDAA++RLAEDRFYNRFPC+IVTAKGQPDVATRLFLRKMKMEL+LP
Sbjct: 231 QDMESDALFILLVEKDAAFMRLAEDRFYNRFPCVIVTAKGQPDVATRLFLRKMKMELRLP 290
Query: 311 VLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPM 370
VL LVDSDPYGLKILSVY GSKNMSYDSA+LTTPDIKWLG+RPSDLDKY+IP+QCRLPM
Sbjct: 291 VLGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDKYRIPQQCRLPM 350
Query: 371 TEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
+E D+KTG+DLLEEDF+KK+P W +EL LMVK K+KAEIQALSSFGFQYLSEVYLP+KLQ
Sbjct: 351 SELDVKTGRDLLEEDFIKKDPRWYQELELMVKNKEKAEIQALSSFGFQYLSEVYLPMKLQ 410
Query: 431 QKDWL 435
++DW+
Sbjct: 411 ERDWI 415
>gi|302810679|ref|XP_002987030.1| hypothetical protein SELMODRAFT_125304 [Selaginella moellendorffii]
gi|300145195|gb|EFJ11873.1| hypothetical protein SELMODRAFT_125304 [Selaginella moellendorffii]
Length = 415
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 290/407 (71%), Positives = 343/407 (84%), Gaps = 11/407 (2%)
Query: 29 LKPDQAILETLKQLFLAATTTTTAAANGASTSSSSSKPLTLSDLSLSATCREVTDLSLSA 88
LK D +IL+ +K A T A G S LSDL+L +CREV +L
Sbjct: 20 LKTDGSILQIIKDF---AEATARAGIRGEKRS--------LSDLALEESCREVAELGSGE 68
Query: 89 VQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTV 148
V+ IE L+L + +SIL G G ++ VPSR S+NQLYV ELDRIVLKDKT++RPFAS STV
Sbjct: 69 VKEEIEKLVLSVTKSILQGQGLAYTVPSRTSANQLYVEELDRIVLKDKTSIRPFASSSTV 128
Query: 149 RKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSL 208
+K+ IT +IL L+HQLC + IHVTKRDLFYTDVKLF +Q QSD VLDDV+C+LGCTR+SL
Sbjct: 129 KKTAITTRILELVHQLCSKQIHVTKRDLFYTDVKLFTEQAQSDTVLDDVSCMLGCTRTSL 188
Query: 209 NVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAA 268
NV+A+EKGVVVGRL+F ++GD IDCTKMG+GGKAIPPNID++ DM+SDA+FILLVEKDAA
Sbjct: 189 NVVASEKGVVVGRLVFVEDGDRIDCTKMGVGGKAIPPNIDKIQDMESDALFILLVEKDAA 248
Query: 269 YIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVY 328
++RLAEDRFYNRFPC+IVTAKGQPDVATRLFLRKMKMEL+LPVL LVDSDPYGLKILSVY
Sbjct: 249 FMRLAEDRFYNRFPCVIVTAKGQPDVATRLFLRKMKMELRLPVLGLVDSDPYGLKILSVY 308
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVK 388
GSKNMSYDSA+LTTPDIKWLG+RPSDLDKY+IP+QCRLPM+E D+KTG+DLLEEDF+K
Sbjct: 309 MSGSKNMSYDSASLTTPDIKWLGVRPSDLDKYRIPQQCRLPMSELDVKTGRDLLEEDFIK 368
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
K+P W +EL LMVK K+KAEIQALSSFGFQYLSEVYLP+KLQ++DW+
Sbjct: 369 KDPRWYQELELMVKNKEKAEIQALSSFGFQYLSEVYLPMKLQERDWI 415
>gi|168022302|ref|XP_001763679.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685172|gb|EDQ71569.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 413
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 294/421 (69%), Positives = 353/421 (83%), Gaps = 13/421 (3%)
Query: 15 PTSDDESELPFKNILKPDQAILETLKQLFLAATTTTTAAANGASTSSSSSKPLTLSDLSL 74
P ++ L FK LK D IL+ + T AA A + TL+DL+L
Sbjct: 6 PRKQTQAALAFKKKLKSDPDILKIV--------TKFAEAAKEADVETR-----TLADLNL 52
Query: 75 SATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLK 134
+ +C+EV +L+ +V +E IL IA+SIL+GNGF + +PSR+S+NQLYVPELDRIVLK
Sbjct: 53 ANSCKEVVELNTRSVVLEVEKSILAIAKSILSGNGFGYLIPSRSSANQLYVPELDRIVLK 112
Query: 135 DKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVL 194
DK + R FA++++VRK+ IT +IL L+HQLC + IHVTKRDLFYTDVKLFQ+Q QSD +L
Sbjct: 113 DKASFRQFANIASVRKTAITTRILQLVHQLCTKQIHVTKRDLFYTDVKLFQEQGQSDTIL 172
Query: 195 DDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQ 254
DDV+C+LGCTRSSLNV+A+EKGVVVGRLIF ++GD IDCTKMG+GGKAIPPNID+V M+
Sbjct: 173 DDVSCMLGCTRSSLNVVASEKGVVVGRLIFIEDGDRIDCTKMGVGGKAIPPNIDKVQGME 232
Query: 255 SDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLAL 314
SDA+FILLVEKDAA++RLAEDRFYNRFPC+I+TAKGQPDVATRLFL+KMK +LKLPVL L
Sbjct: 233 SDALFILLVEKDAAFMRLAEDRFYNRFPCVILTAKGQPDVATRLFLKKMKTDLKLPVLGL 292
Query: 315 VDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQD 374
VDSDPYGLKILSVY GSKNMSYDS+NLTTPDIKWLG+RPSDL+KYKIPEQCRLPM++QD
Sbjct: 293 VDSDPYGLKILSVYMSGSKNMSYDSSNLTTPDIKWLGVRPSDLNKYKIPEQCRLPMSDQD 352
Query: 375 IKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDW 434
IKTGKD+LEEDF+KK+ WV+EL LMVKTK+KAEIQALSSFGFQYLSEVYLPLKLQQ+DW
Sbjct: 353 IKTGKDMLEEDFIKKDKNWVKELELMVKTKEKAEIQALSSFGFQYLSEVYLPLKLQQEDW 412
Query: 435 L 435
+
Sbjct: 413 I 413
>gi|357120049|ref|XP_003561743.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Brachypodium
distachyon]
Length = 464
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 292/443 (65%), Positives = 364/443 (82%), Gaps = 18/443 (4%)
Query: 6 LKQKRRRPDPTSDDESELP------------FKNILKPDQAILETLKQLFLAATTTTTAA 53
+ +++RR + S+ P ++ L+PD +IL +L+ L + ++
Sbjct: 27 MSERKRRGGAAAGSTSKRPRAASAAASYAESLRSKLRPDASILASLRAL-----ASASSK 81
Query: 54 ANGASTSSSSSKPLTLSD-LSLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSF 112
+ A TSS+++K LT D S +++ V D +++V S I L+L +ARSIL G GFSF
Sbjct: 82 SKPAGTSSAAAKALTADDPTSANSSYIVVADQDITSVTSRINRLVLSVARSILEGRGFSF 141
Query: 113 QVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVT 172
VPSR S+NQ+Y+PELDRIVL + + RPFAS+ T RK+T+T ++LSL+H + R IHVT
Sbjct: 142 SVPSRTSTNQVYLPELDRIVLLRRESARPFASVGTARKATVTARVLSLVHAVLRRGIHVT 201
Query: 173 KRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMID 232
KRDLFYTDVKLF DQ+QSDAVLDDV+C+LGCTRSSL+V+A+EKGVVVGRLIF+D+GD ID
Sbjct: 202 KRDLFYTDVKLFGDQSQSDAVLDDVSCMLGCTRSSLHVVASEKGVVVGRLIFADDGDRID 261
Query: 233 CTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQP 292
CT+MG+GGKAIPPNIDRV ++SDA+FILLVEKDAA++RLAEDRFYNRFPCII+TAKGQP
Sbjct: 262 CTRMGVGGKAIPPNIDRVSGIESDALFILLVEKDAAFMRLAEDRFYNRFPCIILTAKGQP 321
Query: 293 DVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGI 352
DVATRLFLR++K+ELKLPVLALVDSDPYGLKILSVY CGSKNMSYDSANLTTPDIKWLG+
Sbjct: 322 DVATRLFLRRLKVELKLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLTTPDIKWLGV 381
Query: 353 RPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQAL 412
RPSDLDKY++PEQCRLPMT+ D+K GK++LEEDFVK+N GWV+EL M++TKQKAEIQAL
Sbjct: 382 RPSDLDKYRVPEQCRLPMTDHDMKVGKEMLEEDFVKQNEGWVKELETMLRTKQKAEIQAL 441
Query: 413 SSFGFQYLSEVYLPLKLQQKDWL 435
SSFGFQYL+EVYLPLKLQQ+DW+
Sbjct: 442 SSFGFQYLTEVYLPLKLQQEDWI 464
>gi|326521994|dbj|BAK04125.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 441
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 278/380 (73%), Positives = 336/380 (88%), Gaps = 1/380 (0%)
Query: 57 ASTSSSSSKPLTLSD-LSLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVP 115
A+ SS+ +K L+ D S S+ V D ++V S I L+L +ARSILAG GFSF VP
Sbjct: 62 ATASSAGAKALSEDDPASASSNYIVVADQDTTSVTSRINRLVLSVARSILAGRGFSFAVP 121
Query: 116 SRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRD 175
SR SSNQ+Y+P+LDRIVL + + RPFA+++T RK+T+T ++LSL+H + R IHVTKRD
Sbjct: 122 SRTSSNQVYLPDLDRIVLLRRESARPFANVATARKATVTARVLSLVHAVLRRGIHVTKRD 181
Query: 176 LFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTK 235
LFYTDVKLF DQ+QSDA+LDDV+C+LGCTRSSL+V+A+EKGVVVGRL F+D+GD+IDCT+
Sbjct: 182 LFYTDVKLFGDQSQSDAILDDVSCMLGCTRSSLHVVASEKGVVVGRLTFADDGDVIDCTR 241
Query: 236 MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVA 295
MG+GGKAIPPNIDRV ++SDA+FILLVEKDAA++RLAEDRFYNRFPCII+TAKGQPDVA
Sbjct: 242 MGVGGKAIPPNIDRVSGIESDALFILLVEKDAAFMRLAEDRFYNRFPCIILTAKGQPDVA 301
Query: 296 TRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPS 355
TRLFLR++K+ELKLPVLALVDSDPYGLKILSVY CGSKNMSYDSANLTTPDIKWLG+RPS
Sbjct: 302 TRLFLRRLKVELKLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLTTPDIKWLGVRPS 361
Query: 356 DLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSF 415
DLDKY++PEQCRLPM++ DIK GK++LEEDFVK+N GWV+EL M++TKQKAEIQALSSF
Sbjct: 362 DLDKYRVPEQCRLPMSDHDIKVGKEMLEEDFVKQNEGWVKELETMLRTKQKAEIQALSSF 421
Query: 416 GFQYLSEVYLPLKLQQKDWL 435
GFQYL+EVYLPLKLQQ+DW+
Sbjct: 422 GFQYLTEVYLPLKLQQEDWI 441
>gi|27476077|gb|AAO17008.1| Hypothetical protein [Oryza sativa Japonica Group]
gi|108707550|gb|ABF95345.1| DNA topoisomerase VIA, putative, expressed [Oryza sativa Japonica
Group]
Length = 830
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 288/411 (70%), Positives = 352/411 (85%), Gaps = 3/411 (0%)
Query: 25 FKNILKPDQAILETLKQLFLAATTTTTAAANGASTSSSSSKPLTLSDLSLSATCREVTDL 84
++ L+PD +IL TL+ L A+ + + G+S+SSSS+ ++ +A+ V D
Sbjct: 423 LRSKLRPDASILATLRSL---ASACSKSKPAGSSSSSSSASKALAAEDDPAASYIVVADQ 479
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
++V S I L+L ARSIL+G GFSF VPSRA+SNQ+Y+P+LDRIVL + + RPFA+
Sbjct: 480 DSASVTSRINRLVLAAARSILSGRGFSFAVPSRAASNQVYLPDLDRIVLVRRESARPFAN 539
Query: 145 LSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT 204
++T RK+TIT ++LSL+H + R IHVTKRDLFYTDVKLF DQ QSDAVLDDV+C+LGCT
Sbjct: 540 VATARKATITARVLSLVHAVLRRGIHVTKRDLFYTDVKLFGDQAQSDAVLDDVSCMLGCT 599
Query: 205 RSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVE 264
RSSL+V+A+EKGVVVGRL F+D+GD IDCT+MG+GGKAIPPNIDRV ++SDA+FILLVE
Sbjct: 600 RSSLHVVASEKGVVVGRLTFADDGDRIDCTRMGVGGKAIPPNIDRVSGIESDALFILLVE 659
Query: 265 KDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
KDAA++RLAEDRFYNRFPCII+TAKGQPDVATRLFLR++K+ELKLPVLALVDSDPYGLKI
Sbjct: 660 KDAAFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPYGLKI 719
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
LSVY CGSKNMSYDSANLTTPDIKWLG+RPSDLDKY++PEQCRLPMT+ DIK GK+LLEE
Sbjct: 720 LSVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEE 779
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
DFVK+N GWV+EL M++T+QKAEIQALSSFGFQYL+EVYLPLKLQQ+DW+
Sbjct: 780 DFVKQNEGWVKELETMLRTRQKAEIQALSSFGFQYLTEVYLPLKLQQQDWI 830
>gi|125543392|gb|EAY89531.1| hypothetical protein OsI_11065 [Oryza sativa Indica Group]
Length = 830
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 288/411 (70%), Positives = 352/411 (85%), Gaps = 3/411 (0%)
Query: 25 FKNILKPDQAILETLKQLFLAATTTTTAAANGASTSSSSSKPLTLSDLSLSATCREVTDL 84
++ L+PD +IL TL+ L A+ + + G+S+SSSS+ ++ +A+ V D
Sbjct: 423 LRSKLRPDASILATLRSL---ASACSKSKPAGSSSSSSSASKALAAEDDPAASYIVVADQ 479
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
++V S I L+L ARSIL+G GFSF VPSRA+SNQ+Y+P+LDRIVL + + RPFA+
Sbjct: 480 DSASVTSRINRLVLAAARSILSGRGFSFAVPSRAASNQVYLPDLDRIVLVRRESARPFAN 539
Query: 145 LSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT 204
++T RK+TIT ++LSL+H + R IHVTKRDLFYTDVKLF DQ QSDAVLDDV+C+LGCT
Sbjct: 540 VATARKATITARVLSLVHAVLRRGIHVTKRDLFYTDVKLFGDQAQSDAVLDDVSCMLGCT 599
Query: 205 RSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVE 264
RSSL+V+A+EKGVVVGRL F+D+GD IDCT+MG+GGKAIPPNIDRV ++SDA+FILLVE
Sbjct: 600 RSSLHVVASEKGVVVGRLTFADDGDRIDCTRMGVGGKAIPPNIDRVSGIESDALFILLVE 659
Query: 265 KDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
KDAA++RLAEDRFYNRFPCII+TAKGQPDVATRLFLR++K+ELKLPVLALVDSDPYGLKI
Sbjct: 660 KDAAFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPYGLKI 719
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
LSVY CGSKNMSYDSANLTTPDIKWLG+RPSDLDKY++PEQCRLPMT+ DIK GK+LLEE
Sbjct: 720 LSVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEE 779
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
DFVK+N GWV+EL M++T+QKAEIQALSSFGFQYL+EVYLPLKLQQ+DW+
Sbjct: 780 DFVKQNEGWVKELETMLRTRQKAEIQALSSFGFQYLTEVYLPLKLQQQDWI 830
>gi|242041321|ref|XP_002468055.1| hypothetical protein SORBIDRAFT_01g038780 [Sorghum bicolor]
gi|241921909|gb|EER95053.1| hypothetical protein SORBIDRAFT_01g038780 [Sorghum bicolor]
Length = 436
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 283/411 (68%), Positives = 350/411 (85%), Gaps = 8/411 (1%)
Query: 25 FKNILKPDQAILETLKQLFLAATTTTTAAANGASTSSSSSKPLTLSDLSLSATCREVTDL 84
++ L+PD +IL TL+ L A+ + + A + + S+ P +++ V D
Sbjct: 34 LRSKLRPDASILATLRSLASASASKSKATSKSLADLDLSADP--------ASSYIVVADQ 85
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
++V S I L+L ARSIL+G GFSF VPSRA+SNQ+Y+P+LDRIVL + + RPFA+
Sbjct: 86 DSASVTSRINRLVLAAARSILSGRGFSFAVPSRAASNQVYLPDLDRIVLVRRESARPFAN 145
Query: 145 LSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT 204
++T RK+TIT ++LSL+H + R IHVTKRDLFYTDVKLF DQ+QSDAVLDDV+C+LGCT
Sbjct: 146 VATARKATITARVLSLVHAVLGRGIHVTKRDLFYTDVKLFGDQSQSDAVLDDVSCMLGCT 205
Query: 205 RSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVE 264
RSSL+V+A+EKGVVVGRL+F+D+GD IDCT+MG+GGKAIPPN+DRV ++SDA+FILLVE
Sbjct: 206 RSSLHVVASEKGVVVGRLVFADDGDRIDCTRMGVGGKAIPPNVDRVSGIESDALFILLVE 265
Query: 265 KDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
KDAA++RLAEDRFYNRFPCII+TAKGQPDVATRLFLR++K+ELKLPVLALVDSDPYGLKI
Sbjct: 266 KDAAFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPYGLKI 325
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
LSVY CGSKNMSYDSANLTTPDIKWLG+RPSDLDKY++PEQCRLPMT+ DIK GK+LLEE
Sbjct: 326 LSVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEE 385
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
DFVK+N GWV+EL +M++TKQKAEIQALSSFGFQYL+EVYLPLKLQ++DW+
Sbjct: 386 DFVKQNEGWVKELEMMLRTKQKAEIQALSSFGFQYLTEVYLPLKLQEQDWI 436
>gi|125585844|gb|EAZ26508.1| hypothetical protein OsJ_10402 [Oryza sativa Japonica Group]
Length = 526
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 288/411 (70%), Positives = 352/411 (85%), Gaps = 3/411 (0%)
Query: 25 FKNILKPDQAILETLKQLFLAATTTTTAAANGASTSSSSSKPLTLSDLSLSATCREVTDL 84
++ L+PD +IL TL+ L A+ + + G+S+SSSS+ ++ +A+ V D
Sbjct: 119 LRSKLRPDASILATLRSL---ASACSKSKPAGSSSSSSSASKALAAEDDPAASYIVVADQ 175
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
++V S I L+L ARSIL+G GFSF VPSRA+SNQ+Y+P+LDRIVL + + RPFA+
Sbjct: 176 DSASVTSRINRLVLAAARSILSGRGFSFAVPSRAASNQVYLPDLDRIVLVRRESARPFAN 235
Query: 145 LSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT 204
++T RK+TIT ++LSL+H + R IHVTKRDLFYTDVKLF DQ QSDAVLDDV+C+LGCT
Sbjct: 236 VATARKATITARVLSLVHAVLRRGIHVTKRDLFYTDVKLFGDQAQSDAVLDDVSCMLGCT 295
Query: 205 RSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVE 264
RSSL+V+A+EKGVVVGRL F+D+GD IDCT+MG+GGKAIPPNIDRV ++SDA+FILLVE
Sbjct: 296 RSSLHVVASEKGVVVGRLTFADDGDRIDCTRMGVGGKAIPPNIDRVSGIESDALFILLVE 355
Query: 265 KDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
KDAA++RLAEDRFYNRFPCII+TAKGQPDVATRLFLR++K+ELKLPVLALVDSDPYGLKI
Sbjct: 356 KDAAFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPYGLKI 415
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
LSVY CGSKNMSYDSANLTTPDIKWLG+RPSDLDKY++PEQCRLPMT+ DIK GK+LLEE
Sbjct: 416 LSVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEE 475
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
DFVK+N GWV+EL M++T+QKAEIQALSSFGFQYL+EVYLPLKLQQ+DW+
Sbjct: 476 DFVKQNEGWVKELETMLRTRQKAEIQALSSFGFQYLTEVYLPLKLQQQDWI 526
>gi|297600747|ref|NP_001049765.2| Os03g0284800 [Oryza sativa Japonica Group]
gi|150371045|dbj|BAF65346.1| topoisomerase Spo11 [Oryza sativa Japonica Group]
gi|255674417|dbj|BAF11679.2| Os03g0284800 [Oryza sativa Japonica Group]
Length = 442
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 288/411 (70%), Positives = 352/411 (85%), Gaps = 3/411 (0%)
Query: 25 FKNILKPDQAILETLKQLFLAATTTTTAAANGASTSSSSSKPLTLSDLSLSATCREVTDL 84
++ L+PD +IL TL+ L A+ + + G+S+SSSS+ ++ +A+ V D
Sbjct: 35 LRSKLRPDASILATLRSL---ASACSKSKPAGSSSSSSSASKALAAEDDPAASYIVVADQ 91
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
++V S I L+L ARSIL+G GFSF VPSRA+SNQ+Y+P+LDRIVL + + RPFA+
Sbjct: 92 DSASVTSRINRLVLAAARSILSGRGFSFAVPSRAASNQVYLPDLDRIVLVRRESARPFAN 151
Query: 145 LSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT 204
++T RK+TIT ++LSL+H + R IHVTKRDLFYTDVKLF DQ QSDAVLDDV+C+LGCT
Sbjct: 152 VATARKATITARVLSLVHAVLRRGIHVTKRDLFYTDVKLFGDQAQSDAVLDDVSCMLGCT 211
Query: 205 RSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVE 264
RSSL+V+A+EKGVVVGRL F+D+GD IDCT+MG+GGKAIPPNIDRV ++SDA+FILLVE
Sbjct: 212 RSSLHVVASEKGVVVGRLTFADDGDRIDCTRMGVGGKAIPPNIDRVSGIESDALFILLVE 271
Query: 265 KDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
KDAA++RLAEDRFYNRFPCII+TAKGQPDVATRLFLR++K+ELKLPVLALVDSDPYGLKI
Sbjct: 272 KDAAFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPYGLKI 331
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
LSVY CGSKNMSYDSANLTTPDIKWLG+RPSDLDKY++PEQCRLPMT+ DIK GK+LLEE
Sbjct: 332 LSVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEE 391
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
DFVK+N GWV+EL M++T+QKAEIQALSSFGFQYL+EVYLPLKLQQ+DW+
Sbjct: 392 DFVKQNEGWVKELETMLRTRQKAEIQALSSFGFQYLTEVYLPLKLQQQDWI 442
>gi|195647934|gb|ACG43435.1| RHL2 [Zea mays]
Length = 436
Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust.
Identities = 284/411 (69%), Positives = 348/411 (84%), Gaps = 8/411 (1%)
Query: 25 FKNILKPDQAILETLKQLFLAATTTTTAAANGASTSSSSSKPLTLSDLSLSATCREVTDL 84
++ L+PD +IL TL+ L A+ + + A A + + P +++ V D
Sbjct: 34 LRSKLRPDASILATLRSLASASASKSKADARSLADHDPCADP--------ASSYIVVADQ 85
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
++V S I L+L ARSIL+G GFSF VPSRA+SNQ+Y+P+LDRIVL + + RPFA+
Sbjct: 86 DSTSVTSRINRLVLAAARSILSGRGFSFAVPSRAASNQVYLPDLDRIVLVRRESARPFAN 145
Query: 145 LSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT 204
++T RK+TIT ++LSL+H + R IHVTKRDLFYTDVKLF DQTQSDAVLDDV+C+LGCT
Sbjct: 146 VATARKATITARVLSLVHAVLGRGIHVTKRDLFYTDVKLFGDQTQSDAVLDDVSCMLGCT 205
Query: 205 RSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVE 264
RSSL+V+A+EKGVVVGRL+F+D+GD IDCT+MG+GGKAIPPN+DRV ++SDA+FILLVE
Sbjct: 206 RSSLHVVASEKGVVVGRLVFADDGDRIDCTRMGVGGKAIPPNVDRVSGIESDALFILLVE 265
Query: 265 KDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
KDAA++RLAEDRFYNRFPCII+TAKGQPDVATRLFLR++K+ELKLPVLALVDSDPYGLKI
Sbjct: 266 KDAAFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPYGLKI 325
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
LSVY CGSKNMSYDSANLTTPDIKWLG+RPSDLDKY++PEQCRLPMT+ DIK GK+LLEE
Sbjct: 326 LSVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEE 385
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
DFVK+N GWV+EL M++TKQKAEIQALSSFGFQYL+EVYLPLKLQ++DW+
Sbjct: 386 DFVKQNEGWVKELETMLRTKQKAEIQALSSFGFQYLTEVYLPLKLQEQDWI 436
>gi|226497286|ref|NP_001141583.1| uncharacterized protein LOC100273699 [Zea mays]
gi|194705154|gb|ACF86661.1| unknown [Zea mays]
gi|414866232|tpg|DAA44789.1| TPA: RHL2 [Zea mays]
Length = 436
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 272/355 (76%), Positives = 323/355 (90%)
Query: 81 VTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLR 140
V D ++V S I L+L ARSIL+G GFSF VPSRA+SNQ+Y+P+LDRIVL + + R
Sbjct: 82 VADQDSTSVTSRINRLVLAAARSILSGRGFSFAVPSRAASNQVYLPDLDRIVLVRRESAR 141
Query: 141 PFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACI 200
PFA+++T RK+TIT ++LSL+H + R IHVTKRDLFYTDVKLF DQTQSDAVLDDV+C+
Sbjct: 142 PFANVATARKATITARVLSLVHAVLGRGIHVTKRDLFYTDVKLFGDQTQSDAVLDDVSCM 201
Query: 201 LGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFI 260
LGCTRSSL+V+A+EKGVVVGRL+F+D+GD IDCT+MG+GGKAIPPN+DRV ++SDA+FI
Sbjct: 202 LGCTRSSLHVVASEKGVVVGRLVFADDGDRIDCTRMGVGGKAIPPNVDRVSGIESDALFI 261
Query: 261 LLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
LLVEKDAA++RLAEDRFYNRFPCII+TAKGQPDVATRLFLR++K+ELKLPVLALVDSDPY
Sbjct: 262 LLVEKDAAFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPY 321
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 380
GLKILSVY CGSKNMSYDSANLTTPDIKWLG+RPSDLDKY++PEQCRLPMT+ DIK GK+
Sbjct: 322 GLKILSVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKVGKE 381
Query: 381 LLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
LLEEDFVK+N GWV+EL M++TKQKAEIQALSSFGFQYL+EVYLPLKLQ++DW+
Sbjct: 382 LLEEDFVKQNEGWVKELETMLRTKQKAEIQALSSFGFQYLTEVYLPLKLQEQDWI 436
>gi|53127616|emb|CAD79468.1| Topoisomerase VI subunit A [Oryza sativa Indica Group]
Length = 442
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 285/411 (69%), Positives = 351/411 (85%), Gaps = 3/411 (0%)
Query: 25 FKNILKPDQAILETLKQLFLAATTTTTAAANGASTSSSSSKPLTLSDLSLSATCREVTDL 84
++ L+PD +IL TL+ L A+ + + G+S+SSSS+ ++ +A+ V D
Sbjct: 35 LRSKLRPDASILATLRSL---ASACSKSKPAGSSSSSSSASKALAAEDDPAASYIVVADQ 91
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
++V S+I L+L ARSIL+G GFSF VPSRA+SNQ+Y+P+L+RIVL + + RPFA+
Sbjct: 92 DSASVTSSINRLVLAAARSILSGRGFSFAVPSRAASNQVYLPDLNRIVLVRRESARPFAN 151
Query: 145 LSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT 204
++T RK+TIT ++L L+H + R IHVTKRDLFYTDVKLF DQ QSDAVLDDV+C+LGCT
Sbjct: 152 VATARKATITARVLFLVHAVLRRGIHVTKRDLFYTDVKLFGDQAQSDAVLDDVSCMLGCT 211
Query: 205 RSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVE 264
RSSL+V+A+EKGVVVGRL F+D+GD IDCT+MG+GGKAIPPNIDRV ++SDA+FILLVE
Sbjct: 212 RSSLHVVASEKGVVVGRLTFADDGDRIDCTRMGVGGKAIPPNIDRVSGIESDALFILLVE 271
Query: 265 KDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
KDAA++RLAEDRFYNRFPCII+TAKGQPDVATRLFLR++K+ELKLPVLALVDSDPYGLKI
Sbjct: 272 KDAAFMRLAEDRFYNRFPCIILTAKGQPDVATRLFLRRLKVELKLPVLALVDSDPYGLKI 331
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
LSVY CGSKNMSYDSANLTTPDIKW G+RPSDLDKY++PEQCRLPMT+ DIK GK+LLEE
Sbjct: 332 LSVYMCGSKNMSYDSANLTTPDIKWPGVRPSDLDKYRVPEQCRLPMTDHDIKVGKELLEE 391
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
DFVK+N GWV+EL M++T+QKAEIQALSSFGFQYL+EVYLPLKLQQ+DW+
Sbjct: 392 DFVKQNEGWVKELETMLRTRQKAEIQALSSFGFQYLTEVYLPLKLQQQDWI 442
>gi|302831884|ref|XP_002947507.1| hypothetical protein VOLCADRAFT_103453 [Volvox carteri f.
nagariensis]
gi|300267371|gb|EFJ51555.1| hypothetical protein VOLCADRAFT_103453 [Volvox carteri f.
nagariensis]
Length = 412
Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust.
Identities = 265/368 (72%), Positives = 315/368 (85%)
Query: 68 TLSDLSLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPE 127
TL +L L CREV D V + IET I +A SI+ G GFSF +PSRA NQ+YVPE
Sbjct: 45 TLGELKLPYNCREVVDKDTDEVLAEIETAIYAVAASIMDGEGFSFDIPSRAKGNQMYVPE 104
Query: 128 LDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQ 187
LDRIVL+D + RPFA+ +T RK+ IT +ILSL+H+L + IHVTKRDLFYTDVKLF+DQ
Sbjct: 105 LDRIVLRDTVSKRPFANTATCRKAAITARILSLVHELVGKRIHVTKRDLFYTDVKLFEDQ 164
Query: 188 TQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNI 247
+QSDAVLDD+AC+LGCTRSSLNV+A+EKGVVVGRL F ++GD IDC +MG+GGKAIPPNI
Sbjct: 165 SQSDAVLDDLACMLGCTRSSLNVVASEKGVVVGRLSFREDGDFIDCQRMGVGGKAIPPNI 224
Query: 248 DRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL 307
D+V D+ SDA FILLVEKDAA++RLAEDRFYN +PCII+TAKGQPDVATRLFL+++K L
Sbjct: 225 DKVSDISSDAAFILLVEKDAAFMRLAEDRFYNTYPCIILTAKGQPDVATRLFLKRLKSTL 284
Query: 308 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR 367
K+PVLALVDSDPYGLKILSVY GS NMSYDS+NLTTPDIKWLG+RPSDLD++ IP+QCR
Sbjct: 285 KIPVLALVDSDPYGLKILSVYMKGSMNMSYDSSNLTTPDIKWLGVRPSDLDRFNIPQQCR 344
Query: 368 LPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPL 427
LPMTE+DIKTG+ LLEEDF++ NP WV+EL LM+ TK KAEIQALSSFGFQYL++VYLPL
Sbjct: 345 LPMTEEDIKTGRRLLEEDFIRANPEWVKELELMLATKVKAEIQALSSFGFQYLTQVYLPL 404
Query: 428 KLQQKDWL 435
KLQ+ DW+
Sbjct: 405 KLQEGDWV 412
>gi|384248976|gb|EIE22459.1| topoisomerase [Coccomyxa subellipsoidea C-169]
Length = 418
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 260/368 (70%), Positives = 315/368 (85%)
Query: 68 TLSDLSLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPE 127
+L+ L L CREV D SAV IE I +A SIL G GFS+ +PSRA NQLYVPE
Sbjct: 51 SLAALDLPQACREVVDKGASAVLDEIEAAIYMVASSILRGEGFSYDIPSRAKGNQLYVPE 110
Query: 128 LDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQ 187
LDRIVLKD T+ RPFAS +T RK+ T ++L L+H+LC++ IHVTKRDLFYTDVKLF+DQ
Sbjct: 111 LDRIVLKDSTSQRPFASTATCRKAVFTTRVLGLVHELCMKQIHVTKRDLFYTDVKLFEDQ 170
Query: 188 TQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNI 247
SDA+LDDVAC LGCTRSSL+V+A+EKGVVVGRL + ++GD+IDC +MG+GGKAIPPN+
Sbjct: 171 GNSDAILDDVACFLGCTRSSLHVVASEKGVVVGRLTYREDGDLIDCQRMGVGGKAIPPNV 230
Query: 248 DRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL 307
D+V D+QSDA+FILLVEKDAA++RLAEDRFYN +PCII+TAKGQPDVA+RLFLRK++ L
Sbjct: 231 DKVTDIQSDALFILLVEKDAAFMRLAEDRFYNTYPCIILTAKGQPDVASRLFLRKLRDTL 290
Query: 308 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR 367
++PVLALVDSDPYGLKILSVY GS NMSYDS+NLTTPDIKWLG+RPSDLD++ IP+QCR
Sbjct: 291 RIPVLALVDSDPYGLKILSVYMKGSMNMSYDSSNLTTPDIKWLGVRPSDLDRFNIPQQCR 350
Query: 368 LPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPL 427
LPMT++DI+TGK LLEEDF++ N WV+EL +M+ +K KAEIQALSSFGFQYLS+VYLPL
Sbjct: 351 LPMTDEDIRTGKRLLEEDFIQANAEWVKELEIMIASKVKAEIQALSSFGFQYLSQVYLPL 410
Query: 428 KLQQKDWL 435
KLQ+ DW+
Sbjct: 411 KLQEGDWI 418
>gi|307106398|gb|EFN54644.1| hypothetical protein CHLNCDRAFT_31596 [Chlorella variabilis]
Length = 416
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 266/368 (72%), Positives = 316/368 (85%)
Query: 68 TLSDLSLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPE 127
TL++L+L CREV D AV IET IL +A S+L G GF++ +PSR+ +NQLYVPE
Sbjct: 49 TLAELNLPHACREVVDKDAGAVLDEIETAILFVAASVLRGEGFTYTLPSRSKANQLYVPE 108
Query: 128 LDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQ 187
LDRIVLKD + R FA+ ST RK+ IT +IL L+H+LC + IHVTKRDLFYTDVKLF+DQ
Sbjct: 109 LDRIVLKDSQSHRAFANTSTCRKAVITTRILQLVHELCTKRIHVTKRDLFYTDVKLFEDQ 168
Query: 188 TQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNI 247
+ SDA+LDD+AC+LGCTRSSL+V+A+EKGVVVGRL F ++GD IDC +MG+GGKAIPPNI
Sbjct: 169 SNSDAILDDLACMLGCTRSSLHVVASEKGVVVGRLTFREDGDPIDCRRMGVGGKAIPPNI 228
Query: 248 DRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL 307
D+V + SDAMFILLVEKDAA++RLAEDRFYN +PCII+TAKGQPDVATRLFLRK+K L
Sbjct: 229 DKVDAITSDAMFILLVEKDAAFMRLAEDRFYNTYPCIIITAKGQPDVATRLFLRKLKQVL 288
Query: 308 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR 367
++PVLALVDSDPYGLKILSVY GS NMSYDS+NLTTPDIKWLG+RPSDLD++ IP+QCR
Sbjct: 289 RIPVLALVDSDPYGLKILSVYMKGSMNMSYDSSNLTTPDIKWLGVRPSDLDRFSIPQQCR 348
Query: 368 LPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPL 427
LPMT++DIKTGK LLEEDFVK NP WV+EL +MV TK KAEIQALSSFGFQYLS+ YLPL
Sbjct: 349 LPMTDEDIKTGKKLLEEDFVKANPEWVKELEIMVTTKVKAEIQALSSFGFQYLSQQYLPL 408
Query: 428 KLQQKDWL 435
KLQ+ DW+
Sbjct: 409 KLQEGDWI 416
>gi|159487423|ref|XP_001701722.1| topoisomerase [Chlamydomonas reinhardtii]
gi|158280941|gb|EDP06697.1| topoisomerase [Chlamydomonas reinhardtii]
Length = 414
Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust.
Identities = 264/369 (71%), Positives = 313/369 (84%), Gaps = 1/369 (0%)
Query: 68 TLSDLSLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPE 127
TL++L L CREV D V IE + +A SIL G GF+F VPSRA NQ+YVPE
Sbjct: 46 TLAELDLPYNCREVVDKDGDDVMGEIEAAMYNVAASILGGEGFAFDVPSRAKGNQMYVPE 105
Query: 128 LDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQ 187
LDRIVL+D + RPFAS +T RK+ +T +IL L+H+L +NIHVTKRDLFYTDVKLF+DQ
Sbjct: 106 LDRIVLRDAVSKRPFASTATCRKAAVTTRILGLVHELLGKNIHVTKRDLFYTDVKLFEDQ 165
Query: 188 TQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNI 247
+QSDA+LDD+AC+LGCTRSSLNV+A+EKGVVVGRL F ++GD IDC +MG+GGKAIPPNI
Sbjct: 166 SQSDAILDDLACMLGCTRSSLNVVASEKGVVVGRLSFREDGDFIDCQRMGVGGKAIPPNI 225
Query: 248 DRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL 307
D+V D+ SDA FILLVEKDAA++RLAEDRFYN +PCII+TAKGQPDVATRLFL+K+K L
Sbjct: 226 DKVSDISSDASFILLVEKDAAFMRLAEDRFYNTYPCIILTAKGQPDVATRLFLKKLKSSL 285
Query: 308 KLPVLALVDSDPYGLKILSVYG-CGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQC 366
K+PVLALVDSDPYGLKILSV+ GS NMSYDS+NLTTPDIKWLG+RPSDLD++ IP+QC
Sbjct: 286 KIPVLALVDSDPYGLKILSVFVLSGSMNMSYDSSNLTTPDIKWLGVRPSDLDRFDIPQQC 345
Query: 367 RLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLP 426
RLPMTE+DIKTGK LLEED++K NP WV EL LM+ +K KAEIQALSSFGFQYLS+VYLP
Sbjct: 346 RLPMTEEDIKTGKRLLEEDWIKSNPEWVRELELMLASKVKAEIQALSSFGFQYLSQVYLP 405
Query: 427 LKLQQKDWL 435
LKLQ+ DW+
Sbjct: 406 LKLQEGDWI 414
>gi|449018621|dbj|BAM82023.1| DNA topoisomerase VI subunit A [Cyanidioschyzon merolae strain 10D]
Length = 433
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 251/366 (68%), Positives = 305/366 (83%), Gaps = 1/366 (0%)
Query: 70 SDLSLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELD 129
SD S SA EV +L V + +E +IL A+SIL G G S++VP R++ NQ YV EL+
Sbjct: 69 SDAS-SAARIEVRELDCDQVLAELERVILSAAKSILEGRGLSYKVPRRSAGNQEYVEELE 127
Query: 130 RIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQ 189
RIVLKD +R FAS+++VRK+TI ++L L+H+LC R IH TKRDLFYTDVKLF+ QT+
Sbjct: 128 RIVLKDGVAIRNFASVASVRKTTIMTRVLQLVHELCTRRIHTTKRDLFYTDVKLFRQQTE 187
Query: 190 SDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDR 249
SD VL+DVAC++GCTR+SLNV+A+EKG+VVGR+ F ++GD+IDCT+MG+GGKAIPP DR
Sbjct: 188 SDDVLNDVACLIGCTRNSLNVVASEKGIVVGRVTFQEDGDLIDCTRMGVGGKAIPPYTDR 247
Query: 250 VGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKL 309
+ ++ SDA FILLVEKDAA++RLAEDRFYNR CIIVTAKGQPDV TRLFLR++K EL L
Sbjct: 248 ITNITSDAEFILLVEKDAAFMRLAEDRFYNRVKCIIVTAKGQPDVGTRLFLRRLKRELHL 307
Query: 310 PVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLP 369
P+L LVDSDPYGLKILSVY GSK MSYDSANL TPDIKWLGIRP+DLD+Y IPEQCRL
Sbjct: 308 PILGLVDSDPYGLKILSVYMSGSKGMSYDSANLATPDIKWLGIRPTDLDRYGIPEQCRLA 367
Query: 370 MTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
MTE D+KTGKD+LEEDF+KKNP W EL+LMVK K+KAEIQALS+FGFQYL+EVYLP K+
Sbjct: 368 MTENDLKTGKDMLEEDFIKKNPAWHRELSLMVKRKEKAEIQALSNFGFQYLTEVYLPEKI 427
Query: 430 QQKDWL 435
+ DW+
Sbjct: 428 RHGDWI 433
>gi|412989091|emb|CCO15682.1| predicted protein [Bathycoccus prasinos]
Length = 424
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 247/379 (65%), Positives = 322/379 (84%)
Query: 57 ASTSSSSSKPLTLSDLSLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPS 116
A S S+ TL DL++ REV D + + + IE L+L +A+SI+ GNGF++Q+PS
Sbjct: 46 AIVKSRPSRRKTLKDLNMEDLYREVLDRPETEIAAAIEQLMLAVAKSIMDGNGFAYQLPS 105
Query: 117 RASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDL 176
R ++Q+Y+ +L+RIVLK+K+T F ++S+VRK TI +++ L+H + + IHVTKRDL
Sbjct: 106 RGQNDQVYIDQLNRIVLKNKSTSAAFTNMSSVRKVTILTRVMQLVHGVLSKGIHVTKRDL 165
Query: 177 FYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKM 236
FYTDVKLF+DQ SDAVLDD++C+LGCTR+SL+V+A+EKGVVVGRL + ++GD IDCTKM
Sbjct: 166 FYTDVKLFKDQKDSDAVLDDISCLLGCTRNSLHVVASEKGVVVGRLRYKEDGDDIDCTKM 225
Query: 237 GMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVAT 296
G+GGKAIP N+D+V ++++DA F+LLVEKDAA++RLAEDRFYN++PCII+TAKGQPDVAT
Sbjct: 226 GVGGKAIPSNVDKVTELRTDAKFVLLVEKDAAFMRLAEDRFYNKYPCIIITAKGQPDVAT 285
Query: 297 RLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSD 356
RLFL K+K ELKLPVLALVD+DPYGLKI+SVY GSKNM++DSANLTTPDIKWLG+RPSD
Sbjct: 286 RLFLSKVKRELKLPVLALVDADPYGLKIISVYMQGSKNMAFDSANLTTPDIKWLGVRPSD 345
Query: 357 LDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFG 416
LDK+KIPEQCRL MT +DI+TG +L+EDF+++NP WV+E+ +M+KTK KAEIQALSS+G
Sbjct: 346 LDKFKIPEQCRLEMTAKDIETGNHMLKEDFIQQNPDWVKEVEIMLKTKTKAEIQALSSYG 405
Query: 417 FQYLSEVYLPLKLQQKDWL 435
FQYLSEVYLPLKLQ+ DW+
Sbjct: 406 FQYLSEVYLPLKLQEGDWI 424
>gi|308803671|ref|XP_003079148.1| topoisomerase 6 subunit A (ISS) [Ostreococcus tauri]
gi|116057603|emb|CAL53806.1| topoisomerase 6 subunit A (ISS) [Ostreococcus tauri]
Length = 422
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 244/371 (65%), Positives = 318/371 (85%)
Query: 65 KPLTLSDLSLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLY 124
K TL+DLS++ REV D + + IE ++L +ARS++ G+GF + +PSR +++Q+Y
Sbjct: 52 KRKTLNDLSIAEAYREVVDREGGEIAAAIEQVMLAVARSVMRGDGFEYTLPSRGATDQVY 111
Query: 125 VPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLF 184
V LDRIVLK+KTT F ++S+VRK TI +++ L+H + R IHVTKRDLFYTDVKLF
Sbjct: 112 VEALDRIVLKNKTTRAAFGTVSSVRKVTILTRVMQLVHGVLSRGIHVTKRDLFYTDVKLF 171
Query: 185 QDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIP 244
+DQ SDAVLDD++C+LGCTR+SL+V+A+EKGVVVGRL + ++GD IDCTKMG+GGKAIP
Sbjct: 172 RDQKDSDAVLDDISCMLGCTRNSLHVVASEKGVVVGRLQYKEDGDEIDCTKMGVGGKAIP 231
Query: 245 PNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMK 304
NID++ DM++DA F+LLVEKDAA++RLAEDRFYN++PCII+TAKGQPDVATRLFL K+K
Sbjct: 232 SNIDKITDMRTDAKFVLLVEKDAAFMRLAEDRFYNKYPCIIITAKGQPDVATRLFLSKVK 291
Query: 305 MELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPE 364
+LK+PVLALVD+DPYGLKI+SVY GSKNM++DSANLTTPDIKWLG+RPSDLDK+KIPE
Sbjct: 292 RDLKIPVLALVDADPYGLKIISVYMQGSKNMAFDSANLTTPDIKWLGVRPSDLDKFKIPE 351
Query: 365 QCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVY 424
QCRL M+ +DI+TG+ +L EDFVK+NP WV+E+N+M++TK KAEIQALS++GFQYL++VY
Sbjct: 352 QCRLDMSAKDIETGQHMLNEDFVKQNPEWVKEINIMLETKTKAEIQALSAYGFQYLTKVY 411
Query: 425 LPLKLQQKDWL 435
LPLKL + DW+
Sbjct: 412 LPLKLAEGDWI 422
>gi|298711265|emb|CBJ26510.1| DNA topoisomerase VI subunit A [Ectocarpus siliculosus]
Length = 639
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 238/368 (64%), Positives = 307/368 (83%)
Query: 68 TLSDLSLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPE 127
TL +L LS EV ++ + V IE + ++ A SI+ GNGF F+VP+R+S NQ YV E
Sbjct: 272 TLLELGLSGDVTEVREMGAAGVMDEIERIAVETALSIMEGNGFGFRVPTRSSGNQKYVEE 331
Query: 128 LDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQ 187
LDRIVL DK + R F S + RK+ IT +++ L+HQ+ + IH+TKRD+FYTDVKLF++Q
Sbjct: 332 LDRIVLGDKVSSRNFVSTAMARKTAITTRVVQLVHQVLGKGIHITKRDMFYTDVKLFKEQ 391
Query: 188 TQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNI 247
++SD VLDDVAC++GCTRS LNV+A++KG+VVGR+ F ++GD+IDCT+MG+GGKAIPP I
Sbjct: 392 SESDNVLDDVACMVGCTRSCLNVVASDKGLVVGRVTFMEDGDLIDCTRMGVGGKAIPPYI 451
Query: 248 DRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL 307
D++ +++SDA FILLVEK+AAY+R+AEDRFY ++PCI++TAKGQPDVATRLFL+++K EL
Sbjct: 452 DKITNIRSDADFILLVEKEAAYMRMAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKREL 511
Query: 308 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR 367
+PV+ LVDSDPYGLKILSVY GSKNMSYDSA+LTTPDIKWLG+RPSDLD+Y IPEQCR
Sbjct: 512 NIPVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYNIPEQCR 571
Query: 368 LPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPL 427
L MTE DIKTGK+LL+EDF+KKN W EL LM+K+K+KAEIQ+LS+FGFQYL++ YLP
Sbjct: 572 LDMTEHDIKTGKELLQEDFIKKNEPWCRELELMIKSKKKAEIQSLSAFGFQYLTQNYLPQ 631
Query: 428 KLQQKDWL 435
KLQ DW+
Sbjct: 632 KLQNGDWV 639
>gi|255070111|ref|XP_002507137.1| type II DNA topoisomerase VI subunit A 2 [Micromonas sp. RCC299]
gi|226522412|gb|ACO68395.1| type II DNA topoisomerase VI subunit A 2 [Micromonas sp. RCC299]
Length = 391
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 241/368 (65%), Positives = 308/368 (83%)
Query: 68 TLSDLSLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPE 127
TL+DL+L+ REV DL V + IE +++ IA +IL GF + +PSR +++Q+YV +
Sbjct: 24 TLNDLNLNEAYREVVDLPGVEVAAAIEQVMIAIADTILRNEGFGYSLPSRGNTDQVYVEQ 83
Query: 128 LDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQ 187
LDRIVLK+K T F + S+VRK I +++ LIH + R IHVTKRDLFYTDVKLF+DQ
Sbjct: 84 LDRIVLKEKHTFTTFHNTSSVRKVAILTRVMQLIHGVLTRGIHVTKRDLFYTDVKLFRDQ 143
Query: 188 TQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNI 247
SD+VLDD++C+LGCTR+SL+V+A+EKGVVVG+L ++++GD IDCTKMG+GGKAIP NI
Sbjct: 144 KDSDSVLDDISCLLGCTRNSLHVVASEKGVVVGKLTYTEDGDEIDCTKMGIGGKAIPSNI 203
Query: 248 DRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL 307
D V +S A F+LLVEKDAA++RLAEDRFYNRFPCII+TAKGQPDVATRLFL K+K +L
Sbjct: 204 DEVDCFRSVAKFVLLVEKDAAFMRLAEDRFYNRFPCIIITAKGQPDVATRLFLSKLKRDL 263
Query: 308 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR 367
++PVLALVD+DPYGLKI+SVY GSKNM++DSANLTTPDIKWLG+RPSDLDK+KIPEQCR
Sbjct: 264 RIPVLALVDADPYGLKIISVYMQGSKNMAFDSANLTTPDIKWLGVRPSDLDKFKIPEQCR 323
Query: 368 LPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPL 427
L M+++DI+TG +L EDF+++NP WV E+ +M+ +K KAEIQALSS+GFQYLSEVYLPL
Sbjct: 324 LEMSQKDIETGHHMLNEDFIQQNPKWVREVKMMLASKTKAEIQALSSYGFQYLSEVYLPL 383
Query: 428 KLQQKDWL 435
KLQ+ DW+
Sbjct: 384 KLQEGDWI 391
>gi|224011048|ref|XP_002294481.1| topoisomerase [Thalassiosira pseudonana CCMP1335]
gi|220969976|gb|EED88315.1| topoisomerase [Thalassiosira pseudonana CCMP1335]
Length = 352
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 235/352 (66%), Positives = 302/352 (85%)
Query: 84 LSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFA 143
++ + V IE + ++IA+ +LA GF ++PSR++SNQ+YVPELDRIVL DKT R F
Sbjct: 1 MNTTQVMEGIENVAVKIAKQVLAKQGFQLEIPSRSASNQVYVPELDRIVLGDKTGTRSFL 60
Query: 144 SLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGC 203
++ RKS IT ++L L+H + L+ IH+TKRDLFYTDVKLF DQ++SD VLDDVA ++GC
Sbjct: 61 NVKESRKSAITTRVLQLLHAVLLKRIHITKRDLFYTDVKLFVDQSESDGVLDDVATMIGC 120
Query: 204 TRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLV 263
TRS+L+V+A++KG+VVGR+ F ++GD IDCTKMG+GGKAIPP ID++ ++QSDA FILLV
Sbjct: 121 TRSNLHVVASDKGLVVGRISFFEDGDFIDCTKMGVGGKAIPPYIDKIENIQSDAEFILLV 180
Query: 264 EKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLK 323
EK+AAY+R+AEDRFY R+PCI++TAKGQPDVATR+FL ++ EL++PVLALVDSDPYGLK
Sbjct: 181 EKEAAYMRMAEDRFYQRYPCIVITAKGQPDVATRMFLSRITSELQIPVLALVDSDPYGLK 240
Query: 324 ILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLE 383
ILSVY GSKNMSYDSA+LTTPDIKWLG+RPSDL++Y +P+QCRL MTE DIKTGK+LL+
Sbjct: 241 ILSVYMSGSKNMSYDSASLTTPDIKWLGLRPSDLNRYDLPDQCRLNMTENDIKTGKELLQ 300
Query: 384 EDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
E F+ KNP W++EL +MVKTKQKAEIQALSSFGFQY++EVYLP KL++ DW+
Sbjct: 301 EAFIMKNPKWMKELQIMVKTKQKAEIQALSSFGFQYITEVYLPRKLKEGDWI 352
>gi|145346380|ref|XP_001417667.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577895|gb|ABO95960.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 339
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 235/339 (69%), Positives = 298/339 (87%)
Query: 97 ILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVK 156
++ A+SI+AG+GF + +PSR +++Q+YV LDRIVLK+KTT FA++S+VRK TI +
Sbjct: 1 MIAAAKSIVAGDGFEYVLPSRGATDQVYVEALDRIVLKNKTTKANFAAVSSVRKVTILTR 60
Query: 157 ILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKG 216
++ L+H + R IHVTKRDLFYTDVKLF+DQ SDAVLDD++C+LGCTR+SL+V+A+EKG
Sbjct: 61 VMQLVHGVLSRGIHVTKRDLFYTDVKLFKDQKDSDAVLDDISCMLGCTRNSLHVVASEKG 120
Query: 217 VVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDR 276
VVVGRL + ++GD IDCTKMG+GGKAIP NID+V DM++DA F+LLVEKDAA++RLAEDR
Sbjct: 121 VVVGRLQYKEDGDEIDCTKMGVGGKAIPSNIDKVRDMRTDAKFVLLVEKDAAFMRLAEDR 180
Query: 277 FYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMS 336
FYN++PCII+TAKGQPDVATRLFL K+K +LK+PVLALVD+DPYGLKI+SVY GSKNM+
Sbjct: 181 FYNKYPCIIITAKGQPDVATRLFLSKVKRDLKIPVLALVDADPYGLKIISVYMQGSKNMA 240
Query: 337 YDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEE 396
+DS NLTTPDIKWLG+RPSDLDK+KIPEQCRL MT +DI+TG +L EDF+K NP WV+E
Sbjct: 241 FDSGNLTTPDIKWLGVRPSDLDKFKIPEQCRLEMTAKDIETGHHMLNEDFIKSNPEWVKE 300
Query: 397 LNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+N+M++TK KAEIQ+LSS+GFQYLSEVYLPLKL + DW+
Sbjct: 301 INIMLETKTKAEIQSLSSYGFQYLSEVYLPLKLLEGDWI 339
>gi|320168151|gb|EFW45050.1| topoisomerase [Capsaspora owczarzaki ATCC 30864]
Length = 406
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 242/368 (65%), Positives = 300/368 (81%), Gaps = 14/368 (3%)
Query: 68 TLSDLSLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPE 127
TL +L +S REV + + V TIE +++Q A+SILAG GFS+ VPSRASSNQLYVP+
Sbjct: 53 TLEELGIS-DAREVAVMDDADVAQTIERIVIQAAQSILAGTGFSYDVPSRASSNQLYVPQ 111
Query: 128 LDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQ 187
L+RIVLK + RPF+S +TVRK+ IT ++LSL+H++ + IH+TKRDLFYTDVKLF+ Q
Sbjct: 112 LERIVLKSAVSNRPFSSTATVRKTAITTRVLSLVHEVLNKRIHITKRDLFYTDVKLFEKQ 171
Query: 188 TQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNI 247
SDAVLDDVAC++GCTR+SLNV+A+EKGVV+GR+ F D+GD IDCTKMG+GGKAIP I
Sbjct: 172 NDSDAVLDDVACMIGCTRTSLNVVASEKGVVIGRVTFRDDGDFIDCTKMGVGGKAIPSLI 231
Query: 248 DRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL 307
DR+ D+Q DA F+LLVEKDAA++RL+EDRFYN++PCII+TA+GQPDV+TRLFL +K L
Sbjct: 232 DRITDLQGDAQFVLLVEKDAAFMRLSEDRFYNQYPCIIITARGQPDVSTRLFLNMVKTRL 291
Query: 308 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR 367
+P+L LVDSDPYGLKILSVY GSKNMSYDSA+LTT DIKWLG +CR
Sbjct: 292 NIPILGLVDSDPYGLKILSVYLSGSKNMSYDSASLTTSDIKWLG-------------ECR 338
Query: 368 LPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPL 427
L MTE DIK G+DLL+EDF+K NP W+ EL LM+KTK+KAEIQALS+FGFQYL++ YLPL
Sbjct: 339 LDMTESDIKYGQDLLKEDFIKNNPAWMAELELMLKTKEKAEIQALSNFGFQYLTQTYLPL 398
Query: 428 KLQQKDWL 435
KLQQ DW+
Sbjct: 399 KLQQGDWI 406
>gi|219111201|ref|XP_002177352.1| type II DNA topoisomerase VI subunit [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217411887|gb|EEC51815.1| type II DNA topoisomerase VI subunit [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 430
Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust.
Identities = 233/356 (65%), Positives = 300/356 (84%)
Query: 80 EVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTL 139
EV +L + V +E + L IA+ +L GFS ++PSRA+SNQ+YV E DRIVL K +
Sbjct: 75 EVVELPATQVLEGMEAMALHIAQQVLERKGFSLEIPSRAASNQIYVKEWDRIVLGGKRSS 134
Query: 140 RPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVAC 199
R F ++ RKS IT++++ L+H + ++ IH+TKRDLFYTDVKLF DQ +SD VLDDVA
Sbjct: 135 RSFLNVKESRKSAITLRVMQLLHAVLMKRIHITKRDLFYTDVKLFVDQAESDGVLDDVAT 194
Query: 200 ILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMF 259
++GCTRS+L+V+A++KG+VVGR+ F ++GD IDCTKMG+GGKAIPP ID++ ++ SDA F
Sbjct: 195 MIGCTRSNLHVVASDKGLVVGRIQFEEDGDFIDCTKMGVGGKAIPPYIDKIENIASDAEF 254
Query: 260 ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDP 319
ILLVEK+AAY+R+AEDRFY+R+PCII+TAKGQPDVATR+FL ++ ELK+PVL LVDSDP
Sbjct: 255 ILLVEKEAAYMRMAEDRFYHRYPCIIITAKGQPDVATRMFLARITSELKIPVLGLVDSDP 314
Query: 320 YGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGK 379
YGLKILSVY GSKNMSYDSA+LTTPDIKWLG+RPSDLDKY +PEQCRL MTE DIKTGK
Sbjct: 315 YGLKILSVYMSGSKNMSYDSASLTTPDIKWLGLRPSDLDKYDLPEQCRLDMTENDIKTGK 374
Query: 380 DLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
++++EDF++KNP W++EL +MVKTK+KAEIQALSSFGFQY++E YLP KL++ DW+
Sbjct: 375 EMMKEDFIQKNPEWMKELEIMVKTKKKAEIQALSSFGFQYVTEQYLPRKLKEGDWI 430
>gi|323455743|gb|EGB11611.1| hypothetical protein AURANDRAFT_52497 [Aureococcus anophagefferens]
Length = 407
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/374 (62%), Positives = 295/374 (78%), Gaps = 1/374 (0%)
Query: 62 SSSKPLTLSDLSLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSN 121
++ KP+ +S + LS R V + V IE L + A SI+ G F F VPSR+++N
Sbjct: 35 ATQKPVDMSTVDLSGM-RVVDAMPADDVAYAIEALFVAAAESIMRGESFKFDVPSRSATN 93
Query: 122 QLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDV 181
Q YV ELDRIVLK + R FA++ VRK+ I ++ SL+H++ + IHVTKRDLFYTDV
Sbjct: 94 QRYVRELDRIVLKHNASERSFANVGQVRKTAIMTRVFSLVHEVVTKGIHVTKRDLFYTDV 153
Query: 182 KLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGK 241
KLF+ Q +SDAVLDD AC +GC RS LNV+AA+KG+VVGR+ F ++GD IDCT+MG+ GK
Sbjct: 154 KLFKKQEESDAVLDDAACTIGCPRSCLNVVAADKGLVVGRVQFDEDGDPIDCTRMGVTGK 213
Query: 242 AIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLR 301
AIP ID++ +++SDA FILLVEKDAAY RLAEDRFYN+FPCI++T KGQPDVATR+FL
Sbjct: 214 AIPAYIDKISNIRSDAEFILLVEKDAAYNRLAEDRFYNQFPCILITGKGQPDVATRMFLS 273
Query: 302 KMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYK 361
++K ELK+PVLA VDSDPYGLKILSVY GSK MSYD+ +LTTPDIKWLG+RPSDLD Y
Sbjct: 274 RLKAELKIPVLAFVDSDPYGLKILSVYMSGSKAMSYDANSLTTPDIKWLGLRPSDLDAYN 333
Query: 362 IPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLS 421
+P+QCRLPMT +DI+ GK LL+EDFV KN WV+EL M+ TKQKAEIQALS+FGFQ+++
Sbjct: 334 LPDQCRLPMTPKDIEMGKQLLKEDFVLKNKQWVKELERMLHTKQKAEIQALSAFGFQFVT 393
Query: 422 EVYLPLKLQQKDWL 435
+VYLP KL+Q DW+
Sbjct: 394 QVYLPRKLRQGDWI 407
>gi|167526605|ref|XP_001747636.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774082|gb|EDQ87716.1| predicted protein [Monosiga brevicollis MX1]
Length = 407
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/388 (57%), Positives = 285/388 (73%), Gaps = 32/388 (8%)
Query: 80 EVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTL 139
EV ++ V IET+ R+I+ G G ++ +PSRA++NQ Y+PELDRIVL +
Sbjct: 20 EVLEMDDEEVAQRIETIATDAVRAIMGGQGINYVMPSRANNNQKYIPELDRIVLLNAVKT 79
Query: 140 RPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQT----------- 188
R F SLS+VRK+ I ++ LIHQ+ + IHVTKRDLFYTDVKLF Q
Sbjct: 80 RAFDSLSSVRKTAIMTRVFQLIHQVVRKRIHVTKRDLFYTDVKLFTKQEEVGCFIAAQRL 139
Query: 189 ---------------------QSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDN 227
QSDAVLDDVAC++GCTR+SLNV+A++KGVVVG + F ++
Sbjct: 140 YVWPAANLLASRVLPWLRLVPQSDAVLDDVACMVGCTRTSLNVVASDKGVVVGCVTFLED 199
Query: 228 GDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVT 287
GD IDCT+MG+GGKAIP ++++ D++ A F+LLVEK+AA++RLAEDRFY R+PC+IVT
Sbjct: 200 GDFIDCTRMGVGGKAIPSLVNKITDIKGTAQFVLLVEKEAAFMRLAEDRFYQRYPCVIVT 259
Query: 288 AKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDI 347
KGQPDV TR F+R +K L +P+L L DSDPYGLKILSVY SKNMSYDSA+LT PDI
Sbjct: 260 GKGQPDVGTRQFVRAVKDALNVPILGLFDSDPYGLKILSVYMSSSKNMSYDSASLTCPDI 319
Query: 348 KWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKA 407
KWLG+RP+DLD+YKIPEQCRLPMT +DI+TG+ LL+ DF+ KN WV+EL LM+ TK KA
Sbjct: 320 KWLGLRPTDLDRYKIPEQCRLPMTAEDIETGRRLLQADFITKNEAWVKELRLMLDTKVKA 379
Query: 408 EIQALSSFGFQYLSEVYLPLKLQQKDWL 435
EIQALS+FGFQYL+EVYLP KL++ DW+
Sbjct: 380 EIQALSNFGFQYLTEVYLPQKLERGDWI 407
>gi|345292731|gb|AEN82857.1| AT5G02820-like protein, partial [Capsella rubella]
gi|345292733|gb|AEN82858.1| AT5G02820-like protein, partial [Capsella rubella]
gi|345292735|gb|AEN82859.1| AT5G02820-like protein, partial [Capsella rubella]
gi|345292737|gb|AEN82860.1| AT5G02820-like protein, partial [Capsella rubella]
gi|345292739|gb|AEN82861.1| AT5G02820-like protein, partial [Capsella rubella]
gi|345292741|gb|AEN82862.1| AT5G02820-like protein, partial [Capsella rubella]
gi|345292743|gb|AEN82863.1| AT5G02820-like protein, partial [Capsella rubella]
Length = 202
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 200/202 (99%), Positives = 202/202 (100%)
Query: 210 VIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAY 269
VIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAY
Sbjct: 1 VIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAY 60
Query: 270 IRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYG 329
+RLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYG
Sbjct: 61 MRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYG 120
Query: 330 CGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKK 389
CGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD+LEEDFVKK
Sbjct: 121 CGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDMLEEDFVKK 180
Query: 390 NPGWVEELNLMVKTKQKAEIQA 411
NPGWVEELNLMVKTKQKAEIQA
Sbjct: 181 NPGWVEELNLMVKTKQKAEIQA 202
>gi|295830615|gb|ADG38976.1| AT5G02820-like protein [Capsella grandiflora]
gi|295830617|gb|ADG38977.1| AT5G02820-like protein [Capsella grandiflora]
gi|295830621|gb|ADG38979.1| AT5G02820-like protein [Capsella grandiflora]
gi|295830623|gb|ADG38980.1| AT5G02820-like protein [Capsella grandiflora]
gi|295830625|gb|ADG38981.1| AT5G02820-like protein [Neslia paniculata]
Length = 199
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/199 (98%), Positives = 199/199 (100%)
Query: 208 LNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDA 267
LNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDA
Sbjct: 1 LNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDA 60
Query: 268 AYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSV 327
AY+RLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSV
Sbjct: 61 AYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSV 120
Query: 328 YGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFV 387
YGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD+LEEDFV
Sbjct: 121 YGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDMLEEDFV 180
Query: 388 KKNPGWVEELNLMVKTKQK 406
KKNPGWVEELNLMVKTKQK
Sbjct: 181 KKNPGWVEELNLMVKTKQK 199
>gi|295830619|gb|ADG38978.1| AT5G02820-like protein [Capsella grandiflora]
Length = 199
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/199 (98%), Positives = 198/199 (99%)
Query: 208 LNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDA 267
LNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAM ILLVEKDA
Sbjct: 1 LNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMVILLVEKDA 60
Query: 268 AYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSV 327
AY+RLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSV
Sbjct: 61 AYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSV 120
Query: 328 YGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFV 387
YGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD+LEEDFV
Sbjct: 121 YGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDMLEEDFV 180
Query: 388 KKNPGWVEELNLMVKTKQK 406
KKNPGWVEELNLMVKTKQK
Sbjct: 181 KKNPGWVEELNLMVKTKQK 199
>gi|428170368|gb|EKX39294.1| Spo11-3/Rhl2/Bin5/Top6A3 vegetative topoisomerase VIA [Guillardia
theta CCMP2712]
Length = 385
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/357 (54%), Positives = 257/357 (71%), Gaps = 7/357 (1%)
Query: 80 EVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASS-NQLYVPELDRIVLKDKTT 138
EV+D S V+ IE + Q SIL G G +F R S+ N +VPELDR L+ K
Sbjct: 35 EVSDQSPEEVRKNIELVACQAVASILDGRGLAFTFAQRGSATNVQFVPELDRNYLEYKAM 94
Query: 139 LRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVA 198
R FA S V+++T+ +++ L+H+L +NIH TKRDLFY DVKLF+ Q SDAVL++++
Sbjct: 95 KRQFADSSQVKRTTMMTRLMQLVHELAKKNIHSTKRDLFYADVKLFEKQQNSDAVLEELS 154
Query: 199 CILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAM 258
+ GCTR SL V A+EKG+VVGRL F+D+ D IDCTKMG GK IP +DR A
Sbjct: 155 LMFGCTRHSLQVTASEKGLVVGRLQFNDDDDFIDCTKMGRSGKNIPSFLDR------PAE 208
Query: 259 FILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSD 318
FILLVEKDAA+ RLAEDRFYN +PC+I+T KG+ D+ATR+FLR++K LK+P+L L DSD
Sbjct: 209 FILLVEKDAAFQRLAEDRFYNTYPCVIITGKGEADLATRMFLRRVKDALKIPILGLFDSD 268
Query: 319 PYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTG 378
+GLKILSVY GS+ MS+DSANL TPDIKWLG+RPSDLDKY +P +CRL +T D+
Sbjct: 269 AHGLKILSVYMQGSEAMSHDSANLATPDIKWLGVRPSDLDKYNVPRECRLELTTHDVSFA 328
Query: 379 KDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+ L E+ +++K WV+EL ++ K+KAEIQA +S GFQYL++ YLP KL++ DW+
Sbjct: 329 ESLKEKPYIQKRSAWVKELETLLSRKEKAEIQAFTSKGFQYLTQEYLPRKLREGDWV 385
>gi|428170369|gb|EKX39295.1| topoisomerase 6 subunit A [Guillardia theta CCMP2712]
Length = 436
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/386 (51%), Positives = 263/386 (68%), Gaps = 30/386 (7%)
Query: 80 EVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASS-NQLYVPELDRIVLKDKTT 138
EV+D S V+ IE + Q SIL G G +F R S+ N +VPELDR L+ K
Sbjct: 51 EVSDQSPEEVRKNIELVACQAVASILDGRGLAFTFAQRGSATNVQFVPELDRNYLEYKAM 110
Query: 139 LRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVA 198
R FA S V+++T+ +++ L+H+L +NIH TKRDLFY DVKLF+ Q SDAVL++++
Sbjct: 111 KRQFADSSQVKRTTMMTRLMQLVHELAKKNIHSTKRDLFYADVKLFEKQQNSDAVLEELS 170
Query: 199 CILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIP---------PNIDR 249
+ GCTR SL V A+EKG+VVGRL F+D+ D IDCTKMG GK IP +DR
Sbjct: 171 LMFGCTRHSLQVTASEKGLVVGRLQFNDDDDFIDCTKMGRSGKNIPSFLDRSVNHARLDR 230
Query: 250 VGDMQSD----AMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKM 305
V +++SD A FILLVEKDAA+ RLAEDRFYN +PC+I+T KG+ D+ATR+FLR++K
Sbjct: 231 VSNIKSDYDRPAEFILLVEKDAAFQRLAEDRFYNTYPCVIITGKGEADLATRMFLRRVKD 290
Query: 306 ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQ 365
LK+P+L L DSD +GLKILSVY GS+ MS+DSANL TPDIKWLG+RPSDLDKY +P +
Sbjct: 291 ALKIPILGLFDSDAHGLKILSVYMQGSEAMSHDSANLATPDIKWLGVRPSDLDKYNVPRE 350
Query: 366 CRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEI---------------- 409
CRL +T D+ + L E+ +++K WV+EL ++ K+KAEI
Sbjct: 351 CRLELTTHDVSFAESLKEKPYIQKRSAWVKELETLLSRKEKAEIRMIFLLCFGGIYLVCA 410
Query: 410 QALSSFGFQYLSEVYLPLKLQQKDWL 435
+A +S GFQYL++ YLP KL++ DW+
Sbjct: 411 EAFTSKGFQYLTQEYLPRKLREGDWV 436
>gi|194697080|gb|ACF82624.1| unknown [Zea mays]
gi|414866233|tpg|DAA44790.1| TPA: hypothetical protein ZEAMMB73_994877 [Zea mays]
Length = 200
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 168/200 (84%), Positives = 192/200 (96%)
Query: 236 MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVA 295
MG+GGKAIPPN+DRV ++SDA+FILLVEKDAA++RLAEDRFYNRFPCII+TAKGQPDVA
Sbjct: 1 MGVGGKAIPPNVDRVSGIESDALFILLVEKDAAFMRLAEDRFYNRFPCIILTAKGQPDVA 60
Query: 296 TRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPS 355
TRLFLR++K+ELKLPVLALVDSDPYGLKILSVY CGSKNMSYDSANLTTPDIKWLG+RPS
Sbjct: 61 TRLFLRRLKVELKLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLTTPDIKWLGVRPS 120
Query: 356 DLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSF 415
DLDKY++PEQCRLPMT+ DIK GK+LLEEDFVK+N GWV+EL M++TKQKAEIQALSSF
Sbjct: 121 DLDKYRVPEQCRLPMTDHDIKVGKELLEEDFVKQNEGWVKELETMLRTKQKAEIQALSSF 180
Query: 416 GFQYLSEVYLPLKLQQKDWL 435
GFQYL+EVYLPLKLQ++DW+
Sbjct: 181 GFQYLTEVYLPLKLQEQDWI 200
>gi|303273422|ref|XP_003056072.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462156|gb|EEH59448.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 334
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 173/275 (62%), Positives = 223/275 (81%)
Query: 54 ANGASTSSSSSKPLTLSDLSLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQ 113
A GA + TL +LS + REVTDLS S V IE +++ + +SIL G+GF F
Sbjct: 44 ALGADIKLRQTVGGTLENLSSELSYREVTDLSGSEVAGAIEQVMMAVVKSILVGDGFGFS 103
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
+PSR S++Q+Y+ +LDRIVL+DK T F++ S+VRK I ++L L+H + R IHVTK
Sbjct: 104 LPSRGSADQVYMEQLDRIVLRDKHTFTSFSNTSSVRKVAILTRVLQLVHGVLSRGIHVTK 163
Query: 174 RDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDC 233
RDLFYTDVKLF+DQ SD VLDD++C+LGCTR+SL+V+A+EKGVVVGRLI++++GD IDC
Sbjct: 164 RDLFYTDVKLFKDQKDSDGVLDDISCLLGCTRNSLHVVASEKGVVVGRLIYTEDGDEIDC 223
Query: 234 TKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPD 293
TKMG+GGKAIP NID+V + +SDA F+LLVEKDAA++RLAEDRFYNRFPC+I+TAKGQPD
Sbjct: 224 TKMGIGGKAIPSNIDKVTNFRSDAKFVLLVEKDAAFMRLAEDRFYNRFPCVIITAKGQPD 283
Query: 294 VATRLFLRKMKMELKLPVLALVDSDPYGLKILSVY 328
VATRLFL K+K +L++PVLALVD+DPYGLKI+SVY
Sbjct: 284 VATRLFLSKLKRDLRIPVLALVDADPYGLKIISVY 318
>gi|169807684|emb|CAQ16341.1| Topoisomerase 6 subunit A [Platanus x acerifolia]
Length = 138
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 133/138 (96%), Positives = 137/138 (99%)
Query: 234 TKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPD 293
TKMGMGGKAIPPNIDRVGDMQSDA+FILLVEKDAAY+RLAEDRFYNRFPCIIVTAKGQPD
Sbjct: 1 TKMGMGGKAIPPNIDRVGDMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPD 60
Query: 294 VATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIR 353
VATRLFL+KMK ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLG+R
Sbjct: 61 VATRLFLKKMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGVR 120
Query: 354 PSDLDKYKIPEQCRLPMT 371
PSDLDKYKIPEQCRLPMT
Sbjct: 121 PSDLDKYKIPEQCRLPMT 138
>gi|296200791|ref|XP_002747753.1| PREDICTED: meiotic recombination protein SPO11 isoform 2
[Callithrix jacchus]
Length = 396
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 134/355 (37%), Positives = 221/355 (62%), Gaps = 5/355 (1%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
S S V ++IE +I I S+ +F + +R+S + + + + T R S
Sbjct: 43 SSSEVLASIENIIQDIITSLARNEAPAFMIDNRSSWENIKFEDSVGLQMVSHCTTRKIKS 102
Query: 145 LS--TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILG 202
S +V+K + +KILS+I++L N + TKRD++YTD +LF +QT D +++D++C+L
Sbjct: 103 DSPKSVQKFALILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLR 162
Query: 203 CTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFIL 261
+R SL++++ KG++ G L + ++G ++CT G A+P NI + ++ SDA F+L
Sbjct: 163 VSRRSLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNIQGIWNLVSDAKFVL 221
Query: 262 LVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
+VEKDA + RL +D F N+ PCI++T KG PD+ TRL ++K+ +PV LVD+DP+
Sbjct: 222 IVEKDATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPH 281
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 380
G++I+ +Y GS +MS+++ +LT P I+WLG+ PSDL + +P+ +P+T++D
Sbjct: 282 GIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMKLDS 341
Query: 381 LLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+L +V P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 342 ILRRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 396
>gi|73992352|ref|XP_853487.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Canis
lupus familiaris]
Length = 396
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 136/355 (38%), Positives = 219/355 (61%), Gaps = 5/355 (1%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
S S V ++IE++I I S+ +F + +R+S + + + + T R S
Sbjct: 43 SSSEVLASIESVIQDIITSVARNEAPAFTIGNRSSWENIKFEDSVGLQMVTHFTTRKIKS 102
Query: 145 --LSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILG 202
L +V+K + +KILS I++L N + TKRD++YTD +LF +QT D +++D++C+L
Sbjct: 103 DSLKSVKKFALILKILSKIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLK 162
Query: 203 CTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFIL 261
R SL++++ KG++ G L + ++G + CT G A+P NI + ++ +DA F+L
Sbjct: 163 VPRMSLHILSTSKGLIAGNLRYIEEDGTRVHCT-CGATAVAVPSNIQGIRNLITDAKFLL 221
Query: 262 LVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
+VEKDA + RL +D F NR PCI++T KG PD+ TRL ++K+ +PV ALVD+DP+
Sbjct: 222 IVEKDATFQRLLDDNFCNRMSPCIMITGKGVPDLNTRLLVKKLWDTFHIPVFALVDADPH 281
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 380
G++I+ +Y GS MS+++ NLT P I+WLG+ PSD+ + IP +P+T++D
Sbjct: 282 GIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPRDTLIPLTKRDQMKLDS 341
Query: 381 LLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+L+ +V P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 342 VLKRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 396
>gi|402882175|ref|XP_003904626.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Papio
anubis]
Length = 396
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 220/355 (61%), Gaps = 5/355 (1%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
S S V +IE +I I S+ +F + +R+S + + + + T R S
Sbjct: 43 SSSEVLVSIENIIQDIITSLARNEAPAFTIDNRSSWENIKFEDSVGLQMVSHCTTRKIKS 102
Query: 145 LS--TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILG 202
S +V+K + +KILS+I++L N + TKRD++YTD +LF +QT D +++D++C+L
Sbjct: 103 DSPKSVKKFALILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLK 162
Query: 203 CTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFIL 261
+R SL++++ KG++ G L + ++G ++CT G A+P NI + ++ +DA F+L
Sbjct: 163 VSRRSLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAIAVPSNIQGIRNLVTDAKFVL 221
Query: 262 LVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
+VEKDA + RL +D F N+ PCI++T KG PD+ TRL ++K+ +PV LVD+DP+
Sbjct: 222 IVEKDATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHVPVFTLVDADPH 281
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 380
G++I+ +Y GS +MS+++ +LT P I+WLG+ PSDL + +P+ +P+T +D
Sbjct: 282 GIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTNRDQMKLDS 341
Query: 381 LLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+L +V + P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 342 ILRRPYVTRQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 396
>gi|348555758|ref|XP_003463690.1| PREDICTED: meiotic recombination protein SPO11-like isoform 1
[Cavia porcellus]
Length = 396
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 137/355 (38%), Positives = 219/355 (61%), Gaps = 5/355 (1%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
S S V ++IE +I I S+ +F + +R+S + + + + + R S
Sbjct: 43 SSSEVLASIENIIQDIVTSLARREAPAFIIDNRSSWENIKFEDTVGLQMVPHCSTRKIRS 102
Query: 145 LS--TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILG 202
S +V+K + +KILS+I++L N + TKRD++YTD +LF +QT D ++DD++C+L
Sbjct: 103 DSPKSVQKFALILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIIDDISCMLK 162
Query: 203 CTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFIL 261
R SL++++ KG++ G L + ++G + C G A+P NI + ++ +DA F+L
Sbjct: 163 LPRRSLHILSTSKGLIAGNLRYVEEDGTRVTCA-CGASAIAVPSNIQGIRNLITDAKFLL 221
Query: 262 LVEKDAAYIRLAEDRF-YNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
+VEKDA + RL +D F Y PCI+VT KG PD+ TRL +R++ +PVL LVD+DP+
Sbjct: 222 IVEKDATFQRLLDDNFCYKMSPCIMVTGKGTPDLNTRLLVRRLWELFHVPVLTLVDADPH 281
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 380
G++I+ +Y GS +MS+++ NLT P I+WLG+ PSD+ + IP+ +P+T+ D
Sbjct: 282 GIEIMCIYKYGSMSMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKDSLIPLTKWDQMKLDS 341
Query: 381 LLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+L+ +V P W +E+ LM +K KAEIQAL+S YLS VYLP KL+ W+
Sbjct: 342 ILKRPYVTGQPFWRKEMELMADSKMKAEIQALNSLSSDYLSRVYLPNKLKFGGWI 396
>gi|351697823|gb|EHB00742.1| Meiotic recombination protein SPO11 [Heterocephalus glaber]
Length = 396
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/355 (37%), Positives = 222/355 (62%), Gaps = 5/355 (1%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
S S V ++IE +I + ++ +F + +R+S + + + + T R S
Sbjct: 43 SSSEVLASIENIIQDVVTTLARNEAPAFIIDNRSSWENIKFDDTVGLQMVSHCTTRKIKS 102
Query: 145 LS--TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILG 202
S +V+K + +KILS+I++L N + TKRD++YTD +LF +Q+ D ++DD++C+L
Sbjct: 103 DSPKSVKKFALILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQSVVDNIIDDISCMLK 162
Query: 203 CTRSSLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFIL 261
R SL++++ KG++ G L F++ +G + C G A+P NI + ++ +DA F+L
Sbjct: 163 VPRRSLHILSTSKGLIAGSLRFTEEDGTRVSCA-CGASAIAVPSNIQGLRNLITDAKFLL 221
Query: 262 LVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
+VEKDA + RL +D F N+ PCI+VT KG PD+ TRL ++K+ +PV LVD+DP+
Sbjct: 222 IVEKDATFQRLLDDNFCNKMSPCIMVTGKGIPDLNTRLLVKKLWDLFHIPVFTLVDADPH 281
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 380
G++I+ +Y GS +MS+++ NLT P ++WLG+ PSD+++ IP+ +P+T++D
Sbjct: 282 GIEIMCIYKYGSMSMSFEAHNLTVPAVRWLGLLPSDINRLNIPKDSLIPLTKRDQMKLDS 341
Query: 381 LLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+L+ +V P W +E+ +M ++ KAEIQAL+S YLS VYLP KL+ W+
Sbjct: 342 ILKRPYVTCQPFWRKEMEMMADSRMKAEIQALTSLSSDYLSRVYLPNKLKFGGWI 396
>gi|301759481|ref|XP_002915573.1| PREDICTED: meiotic recombination protein SPO11-like isoform 2
[Ailuropoda melanoleuca]
gi|281348445|gb|EFB24029.1| hypothetical protein PANDA_003591 [Ailuropoda melanoleuca]
Length = 396
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 136/355 (38%), Positives = 218/355 (61%), Gaps = 5/355 (1%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
S S V ++IE++I I S+ +F + +R+S + + + + T R S
Sbjct: 43 SSSEVLASIESVIQGIITSVARNEAPAFTIENRSSWENIKFEDSVGLQMVSHCTTRKIKS 102
Query: 145 LS--TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILG 202
S +V+ + +KILS+I++L N + TKRD++YTD +LF +QT D +++D++C+L
Sbjct: 103 DSPKSVKNFALILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLK 162
Query: 203 CTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFIL 261
R SL+V++ KG++ G L + ++G + CT G A+P NI + ++ +DA F+L
Sbjct: 163 VPRMSLHVLSTSKGLIAGNLRYMEEDGTRVHCT-CGSTAVAVPSNIQGIRNLITDAKFLL 221
Query: 262 LVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
+VEKDA + RL +D F NR PCI+VT KG PD+ TRL ++K+ +PV LVD+DP+
Sbjct: 222 IVEKDATFQRLLDDDFCNRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPH 281
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 380
G++I+ +Y GS MS+++ NLT P I+WLG+ PSD+ + IP +P+T++D
Sbjct: 282 GIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPRDTLIPLTKRDQMKLDS 341
Query: 381 LLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+L+ +V P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 342 VLKRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 396
>gi|6912680|ref|NP_036576.1| meiotic recombination protein SPO11 isoform a [Homo sapiens]
gi|7674367|sp|Q9Y5K1.1|SPO11_HUMAN RecName: Full=Meiotic recombination protein SPO11; AltName:
Full=Cancer/testis antigen 35; Short=CT35
gi|5532654|gb|AAD44812.1|AF149310_1 Spo11 homolog [Homo sapiens]
gi|5815131|gb|AAD52562.1|AF169385_1 SPO11 [Homo sapiens]
gi|61354156|gb|AAX44047.1| SPO11 meiotic protein covalently bound to DSB-like (S. cerevisiae)
[Homo sapiens]
gi|119595933|gb|EAW75527.1| SPO11 meiotic protein covalently bound to DSB-like (S. cerevisiae),
isoform CRA_b [Homo sapiens]
Length = 396
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 132/355 (37%), Positives = 221/355 (62%), Gaps = 5/355 (1%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
S S V ++IE +I I S+ +F + +R+S + + + + T R S
Sbjct: 43 SSSEVLASIENIIQDIITSLARNEAPAFTIDNRSSWENIKFEDSVGLQMVSHCTTRKIKS 102
Query: 145 LS--TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILG 202
S + +K ++ +KILS+I++L N + TKRD++YTD +LF +QT D +++D++C+L
Sbjct: 103 DSPKSAQKFSLILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLK 162
Query: 203 CTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFIL 261
+R SL++++ KG++ G L + ++G ++CT G A+P NI + ++ +DA F+L
Sbjct: 163 VSRRSLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNIQGIRNLVTDAKFVL 221
Query: 262 LVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
+VEKDA + RL +D F N+ PCI++T KG PD+ TRL ++K+ +PV LVD+DP+
Sbjct: 222 IVEKDATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHVPVFTLVDADPH 281
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 380
G++I+ +Y GS +MS+++ +LT P I+WLG+ PSDL + +P+ +P+T++D
Sbjct: 282 GIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMKLDS 341
Query: 381 LLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+L +V P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 342 ILRRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 396
>gi|395829244|ref|XP_003787770.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Otolemur
garnettii]
Length = 396
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/361 (37%), Positives = 220/361 (60%), Gaps = 5/361 (1%)
Query: 79 REVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTT 138
RE S S V ++IE +I I S+ +F + +R+S + + + +
Sbjct: 37 RETRLASSSEVLASIENIIQDIITSLARNEAPAFTIDNRSSWENIKFDDSVGLQMVPHCI 96
Query: 139 LRPFASLS--TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDD 196
R S S +++K + +KILS+I++L N + TKRD++YTD +LF +QT D ++ D
Sbjct: 97 TRKVKSDSPKSIQKFALILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTIVDNIISD 156
Query: 197 VACILGCTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 255
++C+L R SL++I+ KG++ G L + ++G ++CT G A+P NI + ++ +
Sbjct: 157 ISCMLKVPRRSLHIISTSKGLIAGNLRYIEEDGTKVNCTG-GATAVAVPSNIQGIRNLIT 215
Query: 256 DAMFILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLAL 314
DA F+L+VEKDA + RL +D F + PCI+VT KG PD+ TRL ++K+ + PV L
Sbjct: 216 DAKFLLIVEKDATFQRLLDDNFCKKMSPCIMVTGKGVPDLNTRLLVKKLWDTFRTPVFTL 275
Query: 315 VDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQD 374
VD+DPYG++I+ +Y GS +MS+++ NLT P I+WLG+ PSDL + IP+ +P+T++D
Sbjct: 276 VDADPYGIEIMCIYKYGSMSMSFEAHNLTVPAIRWLGLLPSDLKRLNIPKDSLIPLTKRD 335
Query: 375 IKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDW 434
+L+ +V P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W
Sbjct: 336 QMKLDSILQRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLRFGGW 395
Query: 435 L 435
+
Sbjct: 396 I 396
>gi|114682753|ref|XP_514741.2| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Pan
troglodytes]
gi|397469110|ref|XP_003806207.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Pan
paniscus]
Length = 396
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 132/355 (37%), Positives = 220/355 (61%), Gaps = 5/355 (1%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
S S V ++IE +I I S+ +F + +R+S + + + + T R S
Sbjct: 43 SSSEVLASIENIIQDIITSLARNEAPAFTIDNRSSWENIKFEDSVGLQMVSHCTTRKIKS 102
Query: 145 LS--TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILG 202
S + +K + +KILS+I++L N + TKRD++YTD +LF +QT D +++D++C+L
Sbjct: 103 DSPKSAQKFALILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLK 162
Query: 203 CTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFIL 261
+R SL++++ KG++ G L + ++G ++CT G A+P NI + ++ +DA F+L
Sbjct: 163 VSRRSLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNIQGIRNLVTDAKFVL 221
Query: 262 LVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
+VEKDA + RL +D F N+ PCI++T KG PD+ TRL ++K+ +PV LVD+DP+
Sbjct: 222 IVEKDATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPH 281
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 380
G++I+ +Y GS +MS+++ +LT P I+WLG+ PSDL + +P+ +P+T++D
Sbjct: 282 GIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMKLDS 341
Query: 381 LLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+L +V P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 342 ILRRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 396
>gi|426392232|ref|XP_004062460.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Gorilla
gorilla gorilla]
Length = 396
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 132/355 (37%), Positives = 220/355 (61%), Gaps = 5/355 (1%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
S S V ++IE +I I S+ +F + +R+S + + + + T R S
Sbjct: 43 SSSEVLASIENIIQDIITSLARNEAPAFTIDNRSSWENIKFEDSVGLQMVSHCTTRKIKS 102
Query: 145 LS--TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILG 202
S + +K + +KILS+I++L N + TKRD++YTD +LF +QT D +++D++C+L
Sbjct: 103 DSPKSAQKFALILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLK 162
Query: 203 CTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFIL 261
+R SL++++ KG++ G L + ++G ++CT G A+P NI + ++ +DA F+L
Sbjct: 163 VSRRSLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNIQGIRNLVTDAKFVL 221
Query: 262 LVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
+VEKDA + RL +D F N+ PCI++T KG PD+ TRL ++K+ +PV LVD+DP+
Sbjct: 222 IVEKDATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHVPVFTLVDADPH 281
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 380
G++I+ +Y GS +MS+++ +LT P I+WLG+ PSDL + +P+ +P+T++D
Sbjct: 282 GIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMKLDS 341
Query: 381 LLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+L +V P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 342 ILRRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 396
>gi|354478583|ref|XP_003501494.1| PREDICTED: meiotic recombination protein SPO11 [Cricetulus griseus]
Length = 361
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 135/354 (38%), Positives = 219/354 (61%), Gaps = 5/354 (1%)
Query: 86 LSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASL 145
+S V ++IE +I I +S+ +F + +R+ + + + L + T R S
Sbjct: 9 ISEVLTSIENIIQDIIKSLARNEVPAFTIDNRSRWENITFEDSVGLQLIPQCTTRKIKSD 68
Query: 146 S--TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGC 203
S +V+K + +KILS+I++L N + TKRD+FYT+ +LF +Q D ++DD++C+L
Sbjct: 69 SPKSVKKFALILKILSMIYKLVQSNTYATKRDIFYTNSQLFGNQASVDNIIDDISCMLKV 128
Query: 204 TRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILL 262
R SL+V++ KG++ G L + ++G + CT A+P NI + ++ +DA F+L+
Sbjct: 129 PRRSLHVLSTSKGLIAGNLRYVEEDGTRVQCT-CSATATAVPSNIQGIRNLITDAKFLLI 187
Query: 263 VEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYG 321
VEKDA + RL +D F +R PCI+VT KG PD+ TRL ++K+ +PV LVD+DP+G
Sbjct: 188 VEKDATFQRLLDDNFCSRMSPCIMVTGKGIPDLNTRLLVKKLWDTFHIPVFTLVDADPHG 247
Query: 322 LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDL 381
++IL VY GS +MS+++ +LT P I+WLG+ PSD+ + IP+ +P+T+ D + +
Sbjct: 248 IEILCVYKYGSMSMSFEAHSLTVPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQRKLDSI 307
Query: 382 LEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
L+ ++ P W +EL +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 308 LKRPYITYQPLWRKELEMMADSKMKAEIQALTFLSADYLSRVYLPNKLRFGGWI 361
>gi|109091516|ref|XP_001088572.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Macaca
mulatta]
Length = 396
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 218/355 (61%), Gaps = 5/355 (1%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
S S V +IE +I I S+ +F +R+S + + + + T R S
Sbjct: 43 SSSEVLVSIENIIQDIITSLARNEAPAFTTDNRSSWENIKFEDSVGLQMVSHCTTRKIKS 102
Query: 145 LS--TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILG 202
S +V+K + +KILS+I++L N + TKRD++YTD +LF +QT D +++D++C+L
Sbjct: 103 DSPKSVKKFALILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLK 162
Query: 203 CTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFIL 261
+R SL++++ KG++ G L + ++G ++CT G A+P NI + ++ +DA F+L
Sbjct: 163 VSRRSLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNIQGIRNLVTDAKFVL 221
Query: 262 LVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
+VEKDA + RL +D F N+ PCI++T KG PD+ TRL ++K+ +PV LVD+DP+
Sbjct: 222 IVEKDATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHVPVFTLVDADPH 281
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 380
G++I+ +Y GS +MS+++ +LT P I+WLG+ PSDL + +P+ +P+T +D
Sbjct: 282 GIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTNRDQMKLDS 341
Query: 381 LLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+L +V P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 342 ILRRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 396
>gi|426241227|ref|XP_004014493.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Ovis
aries]
Length = 395
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 134/355 (37%), Positives = 219/355 (61%), Gaps = 6/355 (1%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
S S V S+IE +I I S+ +F + +R+S + + + + T R S
Sbjct: 43 SSSEVLSSIEKIIQDIVTSLARNEAPAFTIDNRSSWENIKFEDSVGLHMVSHCTTRKIKS 102
Query: 145 LS--TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILG 202
S +V+ I +KILS+I++L N + TKRD++YTD +LF +QT D +++D++C+L
Sbjct: 103 DSPKSVKNFAIILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLK 162
Query: 203 CTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFIL 261
R SL++++ KG++ G L + ++G ++CT+ A+P NI + ++ +DA F+L
Sbjct: 163 VPRRSLHILSTSKGLIAGDLKYLEEDGTKVNCTRAT--AVAVPSNIQGIQNLITDAKFLL 220
Query: 262 LVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
+VEKDA + RL +D F N+ PCI+VT KG PD+ TRL ++K+ +PV LVD+DP+
Sbjct: 221 IVEKDATFQRLLDDNFCNKMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPH 280
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 380
G++I+ +Y GS MS+++ NLT P I+WLG+ PSD+ + IP+ +P+T++D
Sbjct: 281 GIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKGTLIPLTKRDQMKLDS 340
Query: 381 LLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+L+ ++ P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 341 ILKRPYITCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 395
>gi|300796909|ref|NP_001180019.1| meiotic recombination protein SPO11 [Bos taurus]
gi|296480908|tpg|DAA23023.1| TPA: SPO11 meiotic protein covalently bound to DSB homolog isoform
2 [Bos taurus]
Length = 395
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 218/355 (61%), Gaps = 6/355 (1%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
S S V S+IE +I I S+ +F + +R+S + + + + T R S
Sbjct: 43 SSSEVLSSIEKIIQDIVTSLARNEAPAFTIDNRSSWENIKFEDSVGLHMVSHCTTRKIKS 102
Query: 145 LS--TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILG 202
S +V+ + +KI S+I++L N + TKRD++YTD +LF +QT D +++D++C+L
Sbjct: 103 DSPKSVKNFALILKIFSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLK 162
Query: 203 CTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFIL 261
R SL++++ KG++ G L + ++G ++CT+ A+P NI + ++ +DA F+L
Sbjct: 163 VPRRSLHILSTSKGLIAGDLKYLEEDGTKVNCTRAT--AVAVPSNIQGIQNLITDAKFLL 220
Query: 262 LVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
+VEKDA + RL +D F N+ PCI+VT KG PDV TRL ++K+ +PV LVD+DP+
Sbjct: 221 IVEKDATFQRLLDDNFCNKMSPCIMVTGKGVPDVNTRLLIKKLWDTFHIPVFTLVDADPH 280
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 380
G++I+ +Y GS MS+++ NLT P I+WLG+ PSD+ + IP+ +P+T++D
Sbjct: 281 GIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKGTLIPLTKRDQMKLDS 340
Query: 381 LLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+L+ ++ P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 341 ILKRPYITCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 395
>gi|410953484|ref|XP_003983400.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Felis
catus]
Length = 396
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/355 (38%), Positives = 216/355 (60%), Gaps = 5/355 (1%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
S S V ++IE++I + S+ F + +R+S + + + + T R S
Sbjct: 43 SSSEVLASIESVIQDVITSLARNKAPVFTIDNRSSWENIKFEDSVGLQMVPHCTRRKIKS 102
Query: 145 LS--TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILG 202
S +V+ + +KILS+I++L N H TKRD++YTD +LF +QT D +++D++C+L
Sbjct: 103 DSPKSVKNFALILKILSIIYKLVQSNTHATKRDIYYTDSQLFGNQTVVDNIINDISCMLK 162
Query: 203 CTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFIL 261
R SL++ + KG++ G L + ++G + CT G A+P NI + ++ +DA F+L
Sbjct: 163 VPRMSLHISSTSKGLIAGNLRYIEEDGTKVHCT-CGTTAVAVPSNIQGIRNIITDAKFLL 221
Query: 262 LVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
+VEKDA + RL +D F NR PCI+VT KG PD+ TRL ++K+ +PV LVD+DP+
Sbjct: 222 IVEKDATFQRLLDDNFCNRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPH 281
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 380
G++I+ +Y GS MS+++ NLT P I+WLG+ PSD+ + IP +P+T++D
Sbjct: 282 GIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPRDTLIPLTKRDQMKLDS 341
Query: 381 LLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+L+ +V P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 342 VLKRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 396
>gi|6755624|ref|NP_036176.1| meiotic recombination protein SPO11 isoform a [Mus musculus]
gi|30179896|sp|Q9WTK8.2|SPO11_MOUSE RecName: Full=Meiotic recombination protein SPO11
gi|5815133|gb|AAD52563.1|AF169386_1 SPO11 [Mus musculus]
gi|9367101|gb|AAF87096.1|AF173848_1 SPO11 protein [Mus musculus]
gi|162318682|gb|AAI56814.1| Sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae) [synthetic construct]
Length = 396
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/355 (37%), Positives = 217/355 (61%), Gaps = 5/355 (1%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
S S V + IE +I I +S+ +F + +R+S + + + + + T R S
Sbjct: 43 SSSEVLTAIENIIQDIIKSLARNEVPAFTIDNRSSWENIMFDDSVGLRMIPQCTTRKIRS 102
Query: 145 LS--TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILG 202
S +V+K + +K+LS+I++L + + TKRD++YTD +LF +Q D+ +DD++C+L
Sbjct: 103 DSPKSVKKFALILKVLSMIYKLIQSDTYATKRDIYYTDSQLFGNQAAVDSAIDDISCMLK 162
Query: 203 CTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFIL 261
R SL+V++ KG++ G L + ++G + CT A+P NI + + +DA F+L
Sbjct: 163 VPRRSLHVLSTSKGLIAGNLRYMEEDGTRVQCT-CSATATAVPTNIQGMQHLITDAKFLL 221
Query: 262 LVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
+VEKDA + RL +D F +R PCI+VT KG PD+ TRL ++K+ +PV LVD+DPY
Sbjct: 222 IVEKDATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPY 281
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 380
G++I+ +Y GS +MS+++ NLT P I+WLG+ PSD+ + IP+ +P+T+ D
Sbjct: 282 GIEIMCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQMKLDS 341
Query: 381 LLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+L+ ++ P W +EL +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 342 ILKRPYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLRFGGWI 396
>gi|149030043|gb|EDL85135.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae) (predicted), isoform CRA_d [Rattus
norvegicus]
Length = 306
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 193/294 (65%), Gaps = 3/294 (1%)
Query: 144 SLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGC 203
SL +VRK + +KILS+I++L N + TKRD++YT+ +LF++Q D+++DD++C+L
Sbjct: 14 SLRSVRKFALILKILSMIYKLIQSNTYATKRDIYYTESQLFRNQAAVDSIIDDISCMLKV 73
Query: 204 TRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILL 262
R SL+VI+ KG++ G L + ++G + C A+P NI + ++ +DA F+L+
Sbjct: 74 PRRSLHVISTSKGLIAGNLRYVEEDGTQVQCM-CSATATAVPSNIQGMQNLVTDAKFLLI 132
Query: 263 VEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYG 321
VEKDA + RL +D F +R PCI+VT KG PD+ TRL ++K+ +PV LVD+DPYG
Sbjct: 133 VEKDATFQRLLDDNFCSRMSPCIMVTGKGTPDLNTRLLVKKLWDTFHIPVFTLVDADPYG 192
Query: 322 LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDL 381
++I+ +Y GS +MS+++ NLT P I+WLG+ PSD+ + IP+ +P+T +D +
Sbjct: 193 IEIMCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIKRLNIPKDSLIPLTRRDQMKLDSI 252
Query: 382 LEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
L ++ +P W +E+ ++ +K KAEIQALS YLS VYLP KL+ W+
Sbjct: 253 LRRPYITYHPFWKKEMEMLADSKTKAEIQALSFLSSDYLSRVYLPNKLRFGGWI 306
>gi|149030042|gb|EDL85134.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae) (predicted), isoform CRA_c [Rattus
norvegicus]
Length = 316
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 193/294 (65%), Gaps = 3/294 (1%)
Query: 144 SLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGC 203
SL +VRK + +KILS+I++L N + TKRD++YT+ +LF++Q D+++DD++C+L
Sbjct: 24 SLRSVRKFALILKILSMIYKLIQSNTYATKRDIYYTESQLFRNQAAVDSIIDDISCMLKV 83
Query: 204 TRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILL 262
R SL+VI+ KG++ G L + ++G + C A+P NI + ++ +DA F+L+
Sbjct: 84 PRRSLHVISTSKGLIAGNLRYVEEDGTQVQCM-CSATATAVPSNIQGMQNLVTDAKFLLI 142
Query: 263 VEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYG 321
VEKDA + RL +D F +R PCI+VT KG PD+ TRL ++K+ +PV LVD+DPYG
Sbjct: 143 VEKDATFQRLLDDNFCSRMSPCIMVTGKGTPDLNTRLLVKKLWDTFHIPVFTLVDADPYG 202
Query: 322 LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDL 381
++I+ +Y GS +MS+++ NLT P I+WLG+ PSD+ + IP+ +P+T +D +
Sbjct: 203 IEIMCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIKRLNIPKDSLIPLTRRDQMKLDSI 262
Query: 382 LEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
L ++ +P W +E+ ++ +K KAEIQALS YLS VYLP KL+ W+
Sbjct: 263 LRRPYITYHPFWKKEMEMLADSKTKAEIQALSFLSSDYLSRVYLPNKLRFGGWI 316
>gi|148674664|gb|EDL06611.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae), isoform CRA_a [Mus musculus]
Length = 353
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 133/353 (37%), Positives = 216/353 (61%), Gaps = 5/353 (1%)
Query: 87 SAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLS 146
S V + IE +I I +S+ +F + +R+S + + + + + T R S S
Sbjct: 2 SEVLTAIENIIQDIIKSLARNEVPAFTIDNRSSWENIMFDDSVGLRMIPQCTTRKIRSDS 61
Query: 147 --TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT 204
+V+K + +K+LS+I++L + + TKRD++YTD +LF +Q D+ +DD++C+L
Sbjct: 62 PKSVKKFALILKVLSMIYKLIQSDTYATKRDIYYTDSQLFGNQAAVDSAIDDISCMLKVP 121
Query: 205 RSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLV 263
R SL+V++ KG++ G L + ++G + CT A+P NI + + +DA F+L+V
Sbjct: 122 RRSLHVLSTSKGLIAGNLRYMEEDGTRVQCT-CSATATAVPTNIQGMQHLITDAKFLLIV 180
Query: 264 EKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGL 322
EKDA + RL +D F +R PCI+VT KG PD+ TRL ++K+ +PV LVD+DPYG+
Sbjct: 181 EKDATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPYGI 240
Query: 323 KILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLL 382
+I+ +Y GS +MS+++ NLT P I+WLG+ PSD+ + IP+ +P+T+ D +L
Sbjct: 241 EIMCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQMKLDSIL 300
Query: 383 EEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+ ++ P W +EL +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 301 KRPYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLRFGGWI 353
>gi|147223337|emb|CAN13251.1| SPO11 meiotic protein covalently bound to DSB-like (S. cerevisiae)
[Sus scrofa]
Length = 395
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 216/355 (60%), Gaps = 6/355 (1%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
S S V S+IE +I + S+ +F + +R+S + + + + T R S
Sbjct: 43 SSSEVLSSIENIIQDVITSLARNEAPAFTIENRSSWENIKFEDSVGLHMVSHCTTRKIKS 102
Query: 145 LS--TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILG 202
S +V+ + +KILS+I++L N + TKRD++YTD +LF +QT D +++DV+C+L
Sbjct: 103 DSPKSVKNFALILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDVSCMLK 162
Query: 203 CTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFIL 261
R SL++ + KG++ G L + ++G ++C A+P NI + ++ +DA F+L
Sbjct: 163 VPRRSLHIFSTSKGLIAGNLRYIEEDGTKVNCA--CATAVAVPSNIQGIWNLITDAKFLL 220
Query: 262 LVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
+VEKDA + RL +D F N+ PCI+VT KG PD+ TRL ++K+ +PV LVD+DP+
Sbjct: 221 IVEKDATFQRLLDDNFCNKMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPH 280
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 380
G++I+ +Y GS MS+++ NLT P I+WLG+ PSD+ + IP+ +P+T++D
Sbjct: 281 GIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKGTLIPLTKRDQMKLDS 340
Query: 381 LLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+L+ +V P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 341 ILKRPYVACQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 395
>gi|395509925|ref|XP_003759237.1| PREDICTED: meiotic recombination protein SPO11 isoform 2
[Sarcophilus harrisii]
Length = 393
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 128/355 (36%), Positives = 220/355 (61%), Gaps = 5/355 (1%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
S S V ++IE +I +I S+ + +R++ + + + + T + S
Sbjct: 40 SSSEVLTSIENIIQEIITSLARNEAPFLTLDNRSNWENIKFEDSVGLQMIHHCTTKKIKS 99
Query: 145 LS--TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILG 202
S + ++ + +KILS+I++L N + TKRD++YTD++LF +Q+ D +++D++C+L
Sbjct: 100 DSAQSAQRFALILKILSMIYKLVQSNTYATKRDIYYTDIQLFGNQSVVDNIINDISCMLK 159
Query: 203 CTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFIL 261
R +L++++ KG++ G L + ++G ++CT G A+P NI + ++ +DA F+L
Sbjct: 160 VPRRNLHILSTSKGLIAGNLSYIEEDGTKVNCT-CGSTVVAVPSNIQGIRNLATDAKFLL 218
Query: 262 LVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
+VEKDA + RL +D F N+ PCII+T KG PD+ TRL ++K+ LP+ LVD+DP+
Sbjct: 219 IVEKDATFQRLLDDNFCNKLSPCIIITGKGVPDLNTRLLVKKLWDTFHLPIFTLVDADPH 278
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 380
G++I+ +Y GS +MS+++ NLT P I+WLG+ PSD+++ IP +P+T++D
Sbjct: 279 GIEIMCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIERLNIPRGTLIPLTKRDQMKLDS 338
Query: 381 LLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+L+ ++ P W +E+ +M + K KAEIQAL+ YLS VYLP KLQ W+
Sbjct: 339 ILKRPYITSQPFWKKEMEIMAELKMKAEIQALTFISSDYLSRVYLPNKLQFGGWI 393
>gi|345790222|ref|XP_867449.2| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Canis
lupus familiaris]
Length = 358
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 123/294 (41%), Positives = 193/294 (65%), Gaps = 3/294 (1%)
Query: 144 SLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGC 203
SL +V+K + +KILS I++L N + TKRD++YTD +LF +QT D +++D++C+L
Sbjct: 66 SLKSVKKFALILKILSKIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLKV 125
Query: 204 TRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILL 262
R SL++++ KG++ G L + ++G + CT G A+P NI + ++ +DA F+L+
Sbjct: 126 PRMSLHILSTSKGLIAGNLRYIEEDGTRVHCT-CGATAVAVPSNIQGIRNLITDAKFLLI 184
Query: 263 VEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYG 321
VEKDA + RL +D F NR PCI++T KG PD+ TRL ++K+ +PV ALVD+DP+G
Sbjct: 185 VEKDATFQRLLDDNFCNRMSPCIMITGKGVPDLNTRLLVKKLWDTFHIPVFALVDADPHG 244
Query: 322 LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDL 381
++I+ +Y GS MS+++ NLT P I+WLG+ PSD+ + IP +P+T++D +
Sbjct: 245 IEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPRDTLIPLTKRDQMKLDSV 304
Query: 382 LEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
L+ +V P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 305 LKRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 358
>gi|348555760|ref|XP_003463691.1| PREDICTED: meiotic recombination protein SPO11-like isoform 2
[Cavia porcellus]
Length = 358
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 192/291 (65%), Gaps = 3/291 (1%)
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRS 206
+V+K + +KILS+I++L N + TKRD++YTD +LF +QT D ++DD++C+L R
Sbjct: 69 SVQKFALILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIIDDISCMLKLPRR 128
Query: 207 SLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
SL++++ KG++ G L + ++G + C G A+P NI + ++ +DA F+L+VEK
Sbjct: 129 SLHILSTSKGLIAGNLRYVEEDGTRVTCA-CGASAIAVPSNIQGIRNLITDAKFLLIVEK 187
Query: 266 DAAYIRLAEDRF-YNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
DA + RL +D F Y PCI+VT KG PD+ TRL +R++ +PVL LVD+DP+G++I
Sbjct: 188 DATFQRLLDDNFCYKMSPCIMVTGKGTPDLNTRLLVRRLWELFHVPVLTLVDADPHGIEI 247
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
+ +Y GS +MS+++ NLT P I+WLG+ PSD+ + IP+ +P+T+ D +L+
Sbjct: 248 MCIYKYGSMSMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKDSLIPLTKWDQMKLDSILKR 307
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+V P W +E+ LM +K KAEIQAL+S YLS VYLP KL+ W+
Sbjct: 308 PYVTGQPFWRKEMELMADSKMKAEIQALNSLSSDYLSRVYLPNKLKFGGWI 358
>gi|402882177|ref|XP_003904627.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Papio
anubis]
Length = 358
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 118/291 (40%), Positives = 194/291 (66%), Gaps = 3/291 (1%)
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRS 206
+V+K + +KILS+I++L N + TKRD++YTD +LF +QT D +++D++C+L +R
Sbjct: 69 SVKKFALILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLKVSRR 128
Query: 207 SLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
SL++++ KG++ G L + ++G ++CT G A+P NI + ++ +DA F+L+VEK
Sbjct: 129 SLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAIAVPSNIQGIRNLVTDAKFVLIVEK 187
Query: 266 DAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
DA + RL +D F N+ PCI++T KG PD+ TRL ++K+ +PV LVD+DP+G++I
Sbjct: 188 DATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHVPVFTLVDADPHGIEI 247
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
+ +Y GS +MS+++ +LT P I+WLG+ PSDL + +P+ +P+T +D +L
Sbjct: 248 MCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTNRDQMKLDSILRR 307
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+V + P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 308 PYVTRQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 358
>gi|296200789|ref|XP_002747752.1| PREDICTED: meiotic recombination protein SPO11 isoform 1
[Callithrix jacchus]
Length = 358
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 119/291 (40%), Positives = 194/291 (66%), Gaps = 3/291 (1%)
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRS 206
+V+K + +KILS+I++L N + TKRD++YTD +LF +QT D +++D++C+L +R
Sbjct: 69 SVQKFALILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLRVSRR 128
Query: 207 SLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
SL++++ KG++ G L + ++G ++CT G A+P NI + ++ SDA F+L+VEK
Sbjct: 129 SLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNIQGIWNLVSDAKFVLIVEK 187
Query: 266 DAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
DA + RL +D F N+ PCI++T KG PD+ TRL ++K+ +PV LVD+DP+G++I
Sbjct: 188 DATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPHGIEI 247
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
+ +Y GS +MS+++ +LT P I+WLG+ PSDL + +P+ +P+T++D +L
Sbjct: 248 MCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMKLDSILRR 307
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+V P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 308 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 358
>gi|395509923|ref|XP_003759236.1| PREDICTED: meiotic recombination protein SPO11 isoform 1
[Sarcophilus harrisii]
Length = 355
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 195/294 (66%), Gaps = 3/294 (1%)
Query: 144 SLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGC 203
S + ++ + +KILS+I++L N + TKRD++YTD++LF +Q+ D +++D++C+L
Sbjct: 63 SAQSAQRFALILKILSMIYKLVQSNTYATKRDIYYTDIQLFGNQSVVDNIINDISCMLKV 122
Query: 204 TRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILL 262
R +L++++ KG++ G L + ++G ++CT G A+P NI + ++ +DA F+L+
Sbjct: 123 PRRNLHILSTSKGLIAGNLSYIEEDGTKVNCT-CGSTVVAVPSNIQGIRNLATDAKFLLI 181
Query: 263 VEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYG 321
VEKDA + RL +D F N+ PCII+T KG PD+ TRL ++K+ LP+ LVD+DP+G
Sbjct: 182 VEKDATFQRLLDDNFCNKLSPCIIITGKGVPDLNTRLLVKKLWDTFHLPIFTLVDADPHG 241
Query: 322 LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDL 381
++I+ +Y GS +MS+++ NLT P I+WLG+ PSD+++ IP +P+T++D +
Sbjct: 242 IEIMCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIERLNIPRGTLIPLTKRDQMKLDSI 301
Query: 382 LEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
L+ ++ P W +E+ +M + K KAEIQAL+ YLS VYLP KLQ W+
Sbjct: 302 LKRPYITSQPFWKKEMEIMAELKMKAEIQALTFISSDYLSRVYLPNKLQFGGWI 355
>gi|344296531|ref|XP_003419960.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Loxodonta
africana]
Length = 396
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 128/354 (36%), Positives = 224/354 (63%), Gaps = 9/354 (2%)
Query: 86 LSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASL 145
L+A+++ I+ +I +AR+ +F + +R+S + + + + + T R S
Sbjct: 48 LAAIENIIQDIIASLARN----EAPAFTIDNRSSWENIKFEDSVGLQMVSQCTTRKIKSD 103
Query: 146 S--TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGC 203
S +V+ + +KILS++++L N + TKRD++YTD++LF +QT D +++D++C+L
Sbjct: 104 SPKSVQNFALILKILSMVYKLVQSNTYATKRDIYYTDIQLFGNQTVVDNIINDISCMLKV 163
Query: 204 TRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILL 262
R SL++++ KG++ G L + ++G ++CT A+P NI + ++ +DA F+L+
Sbjct: 164 PRRSLHILSTSKGLIAGNLSYIEEDGTRVNCTGCSTA-VAVPSNIQGLRNLITDAKFLLI 222
Query: 263 VEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYG 321
VEKDA + RL +D F ++ PCI+VT KG PD+ TRL ++K+ +PV LVD+DP+G
Sbjct: 223 VEKDATFQRLLDDNFCSKISPCIMVTGKGVPDLNTRLLVKKLWDLFHIPVFTLVDADPHG 282
Query: 322 LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDL 381
++I+ +Y GS +MS+++ NLT P I+WLG+ PSD+ + IP+ +P+T++D +
Sbjct: 283 IEIMCIYKYGSLSMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKNTLIPLTKRDQMKLDSI 342
Query: 382 LEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
L+ ++ P W +E+ +M +K KAEIQAL+ YLS+VYLP KL+ W+
Sbjct: 343 LKRPYITCQPFWRKEMEVMADSKMKAEIQALTFISSDYLSKVYLPNKLKFGGWI 396
>gi|395829242|ref|XP_003787769.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Otolemur
garnettii]
Length = 358
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 192/291 (65%), Gaps = 3/291 (1%)
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRS 206
+++K + +KILS+I++L N + TKRD++YTD +LF +QT D ++ D++C+L R
Sbjct: 69 SIQKFALILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTIVDNIISDISCMLKVPRR 128
Query: 207 SLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
SL++I+ KG++ G L + ++G ++CT G A+P NI + ++ +DA F+L+VEK
Sbjct: 129 SLHIISTSKGLIAGNLRYIEEDGTKVNCTG-GATAVAVPSNIQGIRNLITDAKFLLIVEK 187
Query: 266 DAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
DA + RL +D F + PCI+VT KG PD+ TRL ++K+ + PV LVD+DPYG++I
Sbjct: 188 DATFQRLLDDNFCKKMSPCIMVTGKGVPDLNTRLLVKKLWDTFRTPVFTLVDADPYGIEI 247
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
+ +Y GS +MS+++ NLT P I+WLG+ PSDL + IP+ +P+T++D +L+
Sbjct: 248 MCIYKYGSMSMSFEAHNLTVPAIRWLGLLPSDLKRLNIPKDSLIPLTKRDQMKLDSILQR 307
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+V P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 308 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLRFGGWI 358
>gi|149734128|ref|XP_001489976.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Equus
caballus]
Length = 395
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 131/355 (36%), Positives = 216/355 (60%), Gaps = 6/355 (1%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
S S V ++IE ++ I S+ +F + R+S + + + + T R S
Sbjct: 43 SSSQVLASIENVVRDIITSLARNEAPAFTIDDRSSWENIKFEDSVGLQMVSHCTTRKIKS 102
Query: 145 LS--TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILG 202
S +V+ + +KILS+I++L N + TKRD++YTD +LF +QT D+++ DV+C+L
Sbjct: 103 DSPKSVKNFALILKILSMIYKLVQSNTYTTKRDIYYTDSQLFGNQTVVDSIITDVSCMLK 162
Query: 203 CTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFIL 261
R SL++++ KG++ G L + ++G + C+ A+P NI + ++ +DA F+L
Sbjct: 163 VPRRSLHILSTSKGLIAGNLRYIEEDGTKVYCS--CTTAVAVPSNIQGIWNLITDAKFLL 220
Query: 262 LVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
+VEKDA + RL +D F +R PC+IVT KG PD+ TRL ++K+ +P+ LVD+DP+
Sbjct: 221 IVEKDATFQRLLDDNFCSRMSPCVIVTGKGVPDLNTRLLVKKLWDVFHVPIFTLVDADPH 280
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 380
G++I+ +Y GS +MS+++ NLT P I+WLG+ PSD+ + IP+ +P+T++D
Sbjct: 281 GIEIMCIYKYGSMSMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKDALIPLTKRDQMKLDS 340
Query: 381 LLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+L+ +V P W E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 341 ILKRPYVTCQPFWRREMEIMANSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 395
>gi|109091518|ref|XP_001088459.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Macaca
mulatta]
Length = 358
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 118/291 (40%), Positives = 193/291 (66%), Gaps = 3/291 (1%)
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRS 206
+V+K + +KILS+I++L N + TKRD++YTD +LF +QT D +++D++C+L +R
Sbjct: 69 SVKKFALILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLKVSRR 128
Query: 207 SLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
SL++++ KG++ G L + ++G ++CT G A+P NI + ++ +DA F+L+VEK
Sbjct: 129 SLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNIQGIRNLVTDAKFVLIVEK 187
Query: 266 DAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
DA + RL +D F N+ PCI++T KG PD+ TRL ++K+ +PV LVD+DP+G++I
Sbjct: 188 DATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHVPVFTLVDADPHGIEI 247
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
+ +Y GS +MS+++ +LT P I+WLG+ PSDL + +P+ +P+T +D +L
Sbjct: 248 MCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTNRDQMKLDSILRR 307
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+V P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 308 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 358
>gi|355563008|gb|EHH19570.1| hypothetical protein EGK_02264 [Macaca mulatta]
gi|355784368|gb|EHH65219.1| hypothetical protein EGM_01949 [Macaca fascicularis]
Length = 407
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 133/366 (36%), Positives = 220/366 (60%), Gaps = 16/366 (4%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
S S V +IE +I I S+ +F + +R+S + + + + T R S
Sbjct: 43 SSSEVLVSIENIIQDIITSLARNEAPAFTIDNRSSWENIKFEDSVGLQMVSHCTTRKIKS 102
Query: 145 LS--TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILG 202
S +V+K + +KILS+I++L N + TKRD++YTD +LF +QT D +++D++C+L
Sbjct: 103 DSPKSVKKFALILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLK 162
Query: 203 CTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFIL 261
+R SL++++ KG++ G L + ++G ++CT G A+P NI + ++ +DA F+L
Sbjct: 163 VSRRSLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNIQGIRNLVTDAKFVL 221
Query: 262 LVEKDAAYIRLAEDRFYNRF-PCIIVTA-----------KGQPDVATRLFLRKMKMELKL 309
+VEKDA + RL +D F N+ PCI++T+ KG PD+ TRL ++K+ +
Sbjct: 222 IVEKDATFQRLLDDNFCNKLSPCIMITSTPGFQHLKSKGKGVPDLNTRLLVKKLWDTFHV 281
Query: 310 PVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLP 369
PV LVD+DP+G++I+ +Y GS +MS+++ +LT P I+WLG+ PSDL + +P+ +P
Sbjct: 282 PVFTLVDADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIP 341
Query: 370 MTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
+T +D +L +V P W +E+ +M +K KAEIQAL+ YLS VYLP KL
Sbjct: 342 LTNRDQMKLDSILRRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKL 401
Query: 430 QQKDWL 435
+ W+
Sbjct: 402 KFGGWI 407
>gi|403282455|ref|XP_003932664.1| PREDICTED: meiotic recombination protein SPO11 [Saimiri boliviensis
boliviensis]
Length = 358
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 118/291 (40%), Positives = 193/291 (66%), Gaps = 3/291 (1%)
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRS 206
+V+K + +KILS+I++L N + TKRD++YTD +LF +QT D +++D++C+L +R
Sbjct: 69 SVQKFALILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLKVSRR 128
Query: 207 SLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
SL++++ KG++ G L + ++G ++CT G A+P NI + ++ +DA FIL+VEK
Sbjct: 129 SLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNIQGIWNLVTDAKFILIVEK 187
Query: 266 DAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
DA + RL +D F N+ PCI++T KG PD+ TRL ++K+ +PV LVD+DP+G++I
Sbjct: 188 DATFQRLLDDNFCNKMSPCIMITGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPHGIEI 247
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
+ +Y GS +M++++ +LT P I+WLG+ PSDL + +P+ +P+T+ D +L
Sbjct: 248 MFIYKYGSMSMAFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKSDQMKLDSILRR 307
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+V P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 308 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 358
>gi|397618187|gb|EJK64793.1| hypothetical protein THAOC_14440 [Thalassiosira oceanica]
Length = 318
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 115/220 (52%), Positives = 167/220 (75%), Gaps = 5/220 (2%)
Query: 59 TSSSSSKPLTLSDLSLSATCR-----EVTDLSLSAVQSTIETLILQIARSILAGNGFSFQ 113
+ + ++ ++L++L +T EVT++S + V IE + ++IA+ +++ GF
Sbjct: 96 SKKAKTQQMSLAELERRSTADKKAFLEVTEMSSTEVMEGIENVAVKIAQQVMSKQGFQLD 155
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
+PSRA+SNQ+YVPELDRIVL DK R F ++ RK+ IT ++L L+H + + IH+TK
Sbjct: 156 IPSRAASNQIYVPELDRIVLGDKRGTRSFLNVKESRKAAITTRVLQLLHAVLQKRIHITK 215
Query: 174 RDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDC 233
RDLFYTDVKLF DQ+ SD VLDDVA ++GCTRS+L+V+A++KG+VVG++ F ++GD IDC
Sbjct: 216 RDLFYTDVKLFVDQSDSDGVLDDVATMIGCTRSNLHVVASDKGLVVGKISFYEDGDFIDC 275
Query: 234 TKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
TKMG+GGKAIPP ID++ ++QSDA FILLVEK+AAY+R+A
Sbjct: 276 TKMGVGGKAIPPYIDKIENVQSDAEFILLVEKEAAYMRMA 315
>gi|38201680|ref|NP_937998.1| meiotic recombination protein SPO11 isoform b [Homo sapiens]
gi|21706947|gb|AAH33591.1| SPO11 meiotic protein covalently bound to DSB homolog (S.
cerevisiae) [Homo sapiens]
gi|119595932|gb|EAW75526.1| SPO11 meiotic protein covalently bound to DSB-like (S. cerevisiae),
isoform CRA_a [Homo sapiens]
Length = 358
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/291 (40%), Positives = 194/291 (66%), Gaps = 3/291 (1%)
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRS 206
+ +K ++ +KILS+I++L N + TKRD++YTD +LF +QT D +++D++C+L +R
Sbjct: 69 SAQKFSLILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLKVSRR 128
Query: 207 SLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
SL++++ KG++ G L + ++G ++CT G A+P NI + ++ +DA F+L+VEK
Sbjct: 129 SLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNIQGIRNLVTDAKFVLIVEK 187
Query: 266 DAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
DA + RL +D F N+ PCI++T KG PD+ TRL ++K+ +PV LVD+DP+G++I
Sbjct: 188 DATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHVPVFTLVDADPHGIEI 247
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
+ +Y GS +MS+++ +LT P I+WLG+ PSDL + +P+ +P+T++D +L
Sbjct: 248 MCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMKLDSILRR 307
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+V P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 308 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 358
>gi|114682755|ref|XP_001170101.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Pan
troglodytes]
gi|397469112|ref|XP_003806208.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Pan
paniscus]
Length = 358
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/291 (40%), Positives = 193/291 (66%), Gaps = 3/291 (1%)
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRS 206
+ +K + +KILS+I++L N + TKRD++YTD +LF +QT D +++D++C+L +R
Sbjct: 69 SAQKFALILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLKVSRR 128
Query: 207 SLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
SL++++ KG++ G L + ++G ++CT G A+P NI + ++ +DA F+L+VEK
Sbjct: 129 SLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNIQGIRNLVTDAKFVLIVEK 187
Query: 266 DAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
DA + RL +D F N+ PCI++T KG PD+ TRL ++K+ +PV LVD+DP+G++I
Sbjct: 188 DATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPHGIEI 247
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
+ +Y GS +MS+++ +LT P I+WLG+ PSDL + +P+ +P+T++D +L
Sbjct: 248 MCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMKLDSILRR 307
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+V P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 308 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 358
>gi|126303194|ref|XP_001377945.1| PREDICTED: meiotic recombination protein SPO11 isoform 1
[Monodelphis domestica]
Length = 393
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 193/294 (65%), Gaps = 3/294 (1%)
Query: 144 SLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGC 203
S + ++ + +KILS+I++L N + TKRD++YTD++LF +Q D +++D++C+L
Sbjct: 101 SAKSAQRFALILKILSMIYKLVQSNTYATKRDIYYTDIQLFGNQKIVDNIINDISCMLKV 160
Query: 204 TRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILL 262
R +L++++ KG++ G L + ++G ++CT G A+P NI + ++ ++A F+L+
Sbjct: 161 PRRNLHILSTSKGLIAGSLSYIEEDGTKVNCT-CGSTAVAVPSNIQGIRNLITNAKFLLI 219
Query: 263 VEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYG 321
VEKDA + RL +D F N+ PCII+T KG PD+ TRL ++K+ LP+ LVD+DP+G
Sbjct: 220 VEKDATFQRLLDDNFCNKLSPCIIITGKGVPDLNTRLLVKKLWDTFHLPIFTLVDADPHG 279
Query: 322 LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDL 381
++I+ +Y GS +MS+++ NLT P I+WLG+ PSD+ + +P +P+T+QD +
Sbjct: 280 IEIMCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIKRLNVPRGTLIPLTKQDQMKLDSI 339
Query: 382 LEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
L+ ++ P W +E+ +M + K KAEIQAL+ YLS VYLP KLQ W+
Sbjct: 340 LKRPYITCQPFWKKEMEIMAELKMKAEIQALTFISSDYLSRVYLPNKLQFGGWI 393
>gi|410953486|ref|XP_003983401.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Felis
catus]
Length = 358
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 189/291 (64%), Gaps = 3/291 (1%)
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRS 206
+V+ + +KILS+I++L N H TKRD++YTD +LF +QT D +++D++C+L R
Sbjct: 69 SVKNFALILKILSIIYKLVQSNTHATKRDIYYTDSQLFGNQTVVDNIINDISCMLKVPRM 128
Query: 207 SLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
SL++ + KG++ G L + ++G + CT G A+P NI + ++ +DA F+L+VEK
Sbjct: 129 SLHISSTSKGLIAGNLRYIEEDGTKVHCT-CGTTAVAVPSNIQGIRNIITDAKFLLIVEK 187
Query: 266 DAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
DA + RL +D F NR PCI+VT KG PD+ TRL ++K+ +PV LVD+DP+G++I
Sbjct: 188 DATFQRLLDDNFCNRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPHGIEI 247
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
+ +Y GS MS+++ NLT P I+WLG+ PSD+ + IP +P+T++D +L+
Sbjct: 248 MCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPRDTLIPLTKRDQMKLDSVLKR 307
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+V P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 308 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 358
>gi|301759479|ref|XP_002915572.1| PREDICTED: meiotic recombination protein SPO11-like isoform 1
[Ailuropoda melanoleuca]
Length = 358
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 190/291 (65%), Gaps = 3/291 (1%)
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRS 206
+V+ + +KILS+I++L N + TKRD++YTD +LF +QT D +++D++C+L R
Sbjct: 69 SVKNFALILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLKVPRM 128
Query: 207 SLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
SL+V++ KG++ G L + ++G + CT G A+P NI + ++ +DA F+L+VEK
Sbjct: 129 SLHVLSTSKGLIAGNLRYMEEDGTRVHCT-CGSTAVAVPSNIQGIRNLITDAKFLLIVEK 187
Query: 266 DAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
DA + RL +D F NR PCI+VT KG PD+ TRL ++K+ +PV LVD+DP+G++I
Sbjct: 188 DATFQRLLDDDFCNRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPHGIEI 247
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
+ +Y GS MS+++ NLT P I+WLG+ PSD+ + IP +P+T++D +L+
Sbjct: 248 MCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPRDTLIPLTKRDQMKLDSVLKR 307
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+V P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 308 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 358
>gi|426392234|ref|XP_004062461.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Gorilla
gorilla gorilla]
Length = 358
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/291 (40%), Positives = 193/291 (66%), Gaps = 3/291 (1%)
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRS 206
+ +K + +KILS+I++L N + TKRD++YTD +LF +QT D +++D++C+L +R
Sbjct: 69 SAQKFALILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLKVSRR 128
Query: 207 SLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
SL++++ KG++ G L + ++G ++CT G A+P NI + ++ +DA F+L+VEK
Sbjct: 129 SLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNIQGIRNLVTDAKFVLIVEK 187
Query: 266 DAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
DA + RL +D F N+ PCI++T KG PD+ TRL ++K+ +PV LVD+DP+G++I
Sbjct: 188 DATFQRLLDDNFCNKLSPCIMITGKGVPDLNTRLLVKKLWDTFHVPVFTLVDADPHGIEI 247
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
+ +Y GS +MS+++ +LT P I+WLG+ PSDL + +P+ +P+T++D +L
Sbjct: 248 MCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMKLDSILRR 307
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+V P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 308 PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 358
>gi|334312518|ref|XP_003339751.1| PREDICTED: meiotic recombination protein SPO11 isoform 2
[Monodelphis domestica]
Length = 355
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 193/294 (65%), Gaps = 3/294 (1%)
Query: 144 SLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGC 203
S + ++ + +KILS+I++L N + TKRD++YTD++LF +Q D +++D++C+L
Sbjct: 63 SAKSAQRFALILKILSMIYKLVQSNTYATKRDIYYTDIQLFGNQKIVDNIINDISCMLKV 122
Query: 204 TRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILL 262
R +L++++ KG++ G L + ++G ++CT G A+P NI + ++ ++A F+L+
Sbjct: 123 PRRNLHILSTSKGLIAGSLSYIEEDGTKVNCT-CGSTAVAVPSNIQGIRNLITNAKFLLI 181
Query: 263 VEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYG 321
VEKDA + RL +D F N+ PCII+T KG PD+ TRL ++K+ LP+ LVD+DP+G
Sbjct: 182 VEKDATFQRLLDDNFCNKLSPCIIITGKGVPDLNTRLLVKKLWDTFHLPIFTLVDADPHG 241
Query: 322 LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDL 381
++I+ +Y GS +MS+++ NLT P I+WLG+ PSD+ + +P +P+T+QD +
Sbjct: 242 IEIMCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIKRLNVPRGTLIPLTKQDQMKLDSI 301
Query: 382 LEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
L+ ++ P W +E+ +M + K KAEIQAL+ YLS VYLP KLQ W+
Sbjct: 302 LKRPYITCQPFWKKEMEIMAELKMKAEIQALTFISSDYLSRVYLPNKLQFGGWI 355
>gi|145312248|ref|NP_001077429.1| meiotic recombination protein SPO11 isoform b [Mus musculus]
gi|5453472|gb|AAD43588.1|AF163053_1 meiotic DNA transesterase/topoisomerase homolog variant A [Mus
musculus]
gi|5532652|gb|AAD44811.1|AF149309_1 Spo11 homolog [Mus musculus]
gi|9367033|gb|AAF87090.1|AF165313_1 SPO11 [Mus musculus]
gi|5453482|gb|AAD43591.1| meiotic DNA transesterase/topoisomerase homolog variant A [Mus
musculus]
Length = 358
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 119/291 (40%), Positives = 189/291 (64%), Gaps = 3/291 (1%)
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRS 206
+V+K + +K+LS+I++L + + TKRD++YTD +LF +Q D+ +DD++C+L R
Sbjct: 69 SVKKFALILKVLSMIYKLIQSDTYATKRDIYYTDSQLFGNQAAVDSAIDDISCMLKVPRR 128
Query: 207 SLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
SL+V++ KG++ G L + ++G + CT A+P NI + + +DA F+L+VEK
Sbjct: 129 SLHVLSTSKGLIAGNLRYMEEDGTRVQCT-CSATATAVPTNIQGMQHLITDAKFLLIVEK 187
Query: 266 DAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
DA + RL +D F +R PCI+VT KG PD+ TRL ++K+ +PV LVD+DPYG++I
Sbjct: 188 DATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPYGIEI 247
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
+ +Y GS +MS+++ NLT P I+WLG+ PSD+ + IP+ +P+T+ D +L+
Sbjct: 248 MCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQMKLDSILKR 307
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
++ P W +EL +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 308 PYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLRFGGWI 358
>gi|198425262|ref|XP_002129892.1| PREDICTED: similar to Spo11 [Ciona intestinalis]
Length = 385
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 128/360 (35%), Positives = 220/360 (61%), Gaps = 5/360 (1%)
Query: 80 EVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRAS-SNQLYVPELDRIVLKDKT- 137
E D+ + S IE ++ + I G+ Q +R+S N +Y+P + +++D
Sbjct: 27 EQPDIPRDEILSRIEDEVVDLVHQISNGDSPWLQFRNRSSWKNAMYLPNVGLKLIEDPNL 86
Query: 138 TLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDV 197
T F + +V K +TVK+LS+I++L TKRDL+Y + LF Q+ D ++DD+
Sbjct: 87 TTISFGNEGSVNKFGLTVKLLSMIYKLIQSGQVATKRDLYYEEPNLFSSQSIVDHIVDDI 146
Query: 198 ACILGCTRSSLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVGDMQS- 255
+C++ R LNV+A KG+V G L F D +G +DC+ + G +P +D V ++++
Sbjct: 147 SCMICVPRRWLNVVATSKGLVAGDLQFVDPDGQTVDCS-LNQSGLVVPVLVDNVSNIKTQ 205
Query: 256 DAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 315
A F+L++EKDA + RL + F PCI+VT KG PDV TR+ +RK+ EL++PV L+
Sbjct: 206 HAKFVLVIEKDATFQRLLDQGFTTNMPCILVTGKGVPDVNTRILIRKIWNELEIPVFGLM 265
Query: 316 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 375
D+DP+G++I+ VY GS + S+D +L P +KW+G+ PSD+ + ++P+ LP++++D
Sbjct: 266 DADPHGIEIMCVYRFGSLSQSHDVHSLALPFMKWIGVFPSDITRLRLPDDVTLPLSDKDK 325
Query: 376 KTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+D+ +++ + EEL+ M++ +KAEIQAL F YL++V++P K++ +W+
Sbjct: 326 SKCRDIFARPYIEYHARLAEELHNMLRCDRKAEIQALMRFSPNYLAQVFIPSKIKNANWI 385
>gi|148674666|gb|EDL06613.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae), isoform CRA_c [Mus musculus]
Length = 306
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 119/291 (40%), Positives = 189/291 (64%), Gaps = 3/291 (1%)
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRS 206
+V+K + +K+LS+I++L + + TKRD++YTD +LF +Q D+ +DD++C+L R
Sbjct: 17 SVKKFALILKVLSMIYKLIQSDTYATKRDIYYTDSQLFGNQAAVDSAIDDISCMLKVPRR 76
Query: 207 SLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
SL+V++ KG++ G L + ++G + CT A+P NI + + +DA F+L+VEK
Sbjct: 77 SLHVLSTSKGLIAGNLRYMEEDGTRVQCT-CSATATAVPTNIQGMQHLITDAKFLLIVEK 135
Query: 266 DAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
DA + RL +D F +R PCI+VT KG PD+ TRL ++K+ +PV LVD+DPYG++I
Sbjct: 136 DATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPYGIEI 195
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
+ +Y GS +MS+++ NLT P I+WLG+ PSD+ + IP+ +P+T+ D +L+
Sbjct: 196 MCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQMKLDSILKR 255
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
++ P W +EL +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 256 PYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLRFGGWI 306
>gi|291415677|ref|XP_002724077.1| PREDICTED: meiotic recombination protein SPO11 [Oryctolagus
cuniculus]
Length = 395
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 126/355 (35%), Positives = 212/355 (59%), Gaps = 5/355 (1%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
S + V + IE+++ + RS+ + + RAS + E + + T R S
Sbjct: 42 SSAEVLAAIESVVEDVVRSLARREAPALALHDRASWQNVRFAESAGLQMAPHCTTRKVRS 101
Query: 145 LS--TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILG 202
S + K + +KILS+I++L N + TKRD++Y D +LF QT D+++DD++C+L
Sbjct: 102 DSQRSAHKFALILKILSMIYKLVQSNTYATKRDIYYMDSQLFGSQTVVDSIIDDISCMLK 161
Query: 203 CTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFIL 261
R SL++ + KG++ G L + ++G + CT G A+P NI + ++ +DA F+L
Sbjct: 162 VPRRSLHISSTSKGLIAGNLSYVEEDGTRVSCT-CGATVVAVPSNIQGIRNLITDAKFLL 220
Query: 262 LVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
+VEKDA + RL +D F +R PCI+VT KG PD++TRL ++K+ +P LVD+DP+
Sbjct: 221 IVEKDATFQRLLDDNFCSRMSPCIMVTGKGTPDLSTRLLVKKLWDTFHIPAFTLVDADPH 280
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 380
G++I+ +Y GS +M +++ +LT P ++WLG+ PSD+ + +P+ +P+T++D+
Sbjct: 281 GIEIMCIYKYGSMSMCFEAHHLTVPAVRWLGLLPSDVSRLHVPKDSLIPLTKRDLMKLDS 340
Query: 381 LLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+L+ ++ P W E+ M +K KA IQAL+ YLS VYLP KL+ W+
Sbjct: 341 ILKRPYIACQPLWRAEMEAMASSKVKAGIQALTVLSADYLSRVYLPNKLKSGGWI 395
>gi|426241229|ref|XP_004014494.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Ovis
aries]
Length = 357
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 118/291 (40%), Positives = 192/291 (65%), Gaps = 4/291 (1%)
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRS 206
+V+ I +KILS+I++L N + TKRD++YTD +LF +QT D +++D++C+L R
Sbjct: 69 SVKNFAIILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLKVPRR 128
Query: 207 SLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
SL++++ KG++ G L + ++G ++CT+ A+P NI + ++ +DA F+L+VEK
Sbjct: 129 SLHILSTSKGLIAGDLKYLEEDGTKVNCTRAT--AVAVPSNIQGIQNLITDAKFLLIVEK 186
Query: 266 DAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
DA + RL +D F N+ PCI+VT KG PD+ TRL ++K+ +PV LVD+DP+G++I
Sbjct: 187 DATFQRLLDDNFCNKMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPHGIEI 246
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
+ +Y GS MS+++ NLT P I+WLG+ PSD+ + IP+ +P+T++D +L+
Sbjct: 247 MCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKGTLIPLTKRDQMKLDSILKR 306
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
++ P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 307 PYITCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 357
>gi|296480907|tpg|DAA23022.1| TPA: SPO11 meiotic protein covalently bound to DSB homolog isoform
1 [Bos taurus]
Length = 357
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/291 (40%), Positives = 191/291 (65%), Gaps = 4/291 (1%)
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRS 206
+V+ + +KI S+I++L N + TKRD++YTD +LF +QT D +++D++C+L R
Sbjct: 69 SVKNFALILKIFSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLKVPRR 128
Query: 207 SLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
SL++++ KG++ G L + ++G ++CT+ A+P NI + ++ +DA F+L+VEK
Sbjct: 129 SLHILSTSKGLIAGDLKYLEEDGTKVNCTRAT--AVAVPSNIQGIQNLITDAKFLLIVEK 186
Query: 266 DAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
DA + RL +D F N+ PCI+VT KG PDV TRL ++K+ +PV LVD+DP+G++I
Sbjct: 187 DATFQRLLDDNFCNKMSPCIMVTGKGVPDVNTRLLIKKLWDTFHIPVFTLVDADPHGIEI 246
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
+ +Y GS MS+++ NLT P I+WLG+ PSD+ + IP+ +P+T++D +L+
Sbjct: 247 MCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKGTLIPLTKRDQMKLDSILKR 306
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
++ P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 307 PYITCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 357
>gi|443684396|gb|ELT88325.1| hypothetical protein CAPTEDRAFT_89794 [Capitella teleta]
Length = 364
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 187/294 (63%), Gaps = 3/294 (1%)
Query: 144 SLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGC 203
S ++ +K +T+K+LS +HQL + TKR+L+Y DVKLF Q+ D ++DDVAC+L
Sbjct: 72 SANSAQKFALTMKVLSKVHQLVRTDTFCTKRELYYQDVKLFPGQSTLDDIVDDVACMLQV 131
Query: 204 TRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILL 262
R +L+++A KG+V G L F S +G+ IDC+ G G IP ++ + ++Q++A F+L+
Sbjct: 132 PRWNLHILATSKGLVAGDLFFTSGDGEHIDCSSTGTG-VLIPNHVQGISNLQTEAEFVLV 190
Query: 263 VEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYG 321
VEKDA + L + + P I++T KG PDV TRLF+R + +LP L LVD+DP+G
Sbjct: 191 VEKDATFQLLLDQKLRQYVGPHILITGKGFPDVNTRLFVRLLWQHFRLPTLCLVDADPHG 250
Query: 322 LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDL 381
L+I+S Y GSK S+++ +LT P ++WLGI PS++ + + +TE+DIK +L
Sbjct: 251 LEIMSTYKYGSKAQSFEANHLTVPSLRWLGILPSEVQRLIPSTNGLMQLTERDIKKANEL 310
Query: 382 LEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
L ++ P W E+ ++KTK KAEIQ LS +LS +YLP K++ WL
Sbjct: 311 LTRPYLSAQPLWKTEIEYLIKTKMKAEIQCLSQIAIDFLSNIYLPNKIRNSSWL 364
>gi|149030041|gb|EDL85133.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae) (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 321
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/309 (39%), Positives = 193/309 (62%), Gaps = 18/309 (5%)
Query: 144 SLSTVRKSTITVKILSLIHQLCLRNIHVTK---------------RDLFYTDVKLFQDQT 188
SL +VRK + +KILS+I++L N + TK RD++YT+ +LF++Q
Sbjct: 14 SLRSVRKFALILKILSMIYKLIQSNTYATKSPGARAHSVLTLHLHRDIYYTESQLFRNQA 73
Query: 189 QSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNI 247
D+++DD++C+L R SL+VI+ KG++ G L + ++G + C A+P NI
Sbjct: 74 AVDSIIDDISCMLKVPRRSLHVISTSKGLIAGNLRYVEEDGTQVQCM-CSATATAVPSNI 132
Query: 248 DRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKME 306
+ ++ +DA F+L+VEKDA + RL +D F +R PCI+VT KG PD+ TRL ++K+
Sbjct: 133 QGMQNLVTDAKFLLIVEKDATFQRLLDDNFCSRMSPCIMVTGKGTPDLNTRLLVKKLWDT 192
Query: 307 LKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQC 366
+PV LVD+DPYG++I+ +Y GS +MS+++ NLT P I+WLG+ PSD+ + IP+
Sbjct: 193 FHIPVFTLVDADPYGIEIMCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIKRLNIPKDS 252
Query: 367 RLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLP 426
+P+T +D +L ++ +P W +E+ ++ +K KAEIQALS YLS VYLP
Sbjct: 253 LIPLTRRDQMKLDSILRRPYITYHPFWKKEMEMLADSKTKAEIQALSFLSSDYLSRVYLP 312
Query: 427 LKLQQKDWL 435
KL+ W+
Sbjct: 313 NKLRFGGWI 321
>gi|157818345|ref|NP_001102434.1| meiotic recombination protein SPO11 [Rattus norvegicus]
gi|149030040|gb|EDL85132.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae) (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 331
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/309 (39%), Positives = 193/309 (62%), Gaps = 18/309 (5%)
Query: 144 SLSTVRKSTITVKILSLIHQLCLRNIHVTK---------------RDLFYTDVKLFQDQT 188
SL +VRK + +KILS+I++L N + TK RD++YT+ +LF++Q
Sbjct: 24 SLRSVRKFALILKILSMIYKLIQSNTYATKSPGARAHSVLTLHLHRDIYYTESQLFRNQA 83
Query: 189 QSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNI 247
D+++DD++C+L R SL+VI+ KG++ G L + ++G + C A+P NI
Sbjct: 84 AVDSIIDDISCMLKVPRRSLHVISTSKGLIAGNLRYVEEDGTQVQCM-CSATATAVPSNI 142
Query: 248 DRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKME 306
+ ++ +DA F+L+VEKDA + RL +D F +R PCI+VT KG PD+ TRL ++K+
Sbjct: 143 QGMQNLVTDAKFLLIVEKDATFQRLLDDNFCSRMSPCIMVTGKGTPDLNTRLLVKKLWDT 202
Query: 307 LKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQC 366
+PV LVD+DPYG++I+ +Y GS +MS+++ NLT P I+WLG+ PSD+ + IP+
Sbjct: 203 FHIPVFTLVDADPYGIEIMCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIKRLNIPKDS 262
Query: 367 RLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLP 426
+P+T +D +L ++ +P W +E+ ++ +K KAEIQALS YLS VYLP
Sbjct: 263 LIPLTRRDQMKLDSILRRPYITYHPFWKKEMEMLADSKTKAEIQALSFLSSDYLSRVYLP 322
Query: 427 LKLQQKDWL 435
KL+ W+
Sbjct: 323 NKLRFGGWI 331
>gi|156392691|ref|XP_001636181.1| predicted protein [Nematostella vectensis]
gi|156223282|gb|EDO44118.1| predicted protein [Nematostella vectensis]
Length = 405
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 191/296 (64%), Gaps = 3/296 (1%)
Query: 142 FASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACIL 201
F S++++ K T++ILS+ L + TKRD++YTD F +Q D ++D+++C+L
Sbjct: 111 FESINSIGKFATTIRILSICQNLLQEDRFATKRDVYYTDTVFFGNQNVVDDIVDNLSCML 170
Query: 202 GCTRSSLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFI 260
R SL ++A+ KG++ G + + + +G +DCT + G A+ ++D + D+ SDA +
Sbjct: 171 EVPRHSLRILASSKGLISGHVRYREYDGTYVDCTCLTRG-VAVSSHVDGIYDLYSDAKVV 229
Query: 261 LLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDP 319
L+VEK+A Y RL +D + PCI++T KG PDV TR + ++ L +PV+ALVD+DP
Sbjct: 230 LVVEKEATYHRLLDDGLLEKLNPCIMITGKGYPDVNTRQMVHRLWCTLHVPVMALVDADP 289
Query: 320 YGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGK 379
+G++ILSVY GSK +S++ +LT P I+WLG+ PS++D+ IPE R+P+TE+D
Sbjct: 290 HGIEILSVYKYGSKALSFNVHDLTVPTIRWLGVWPSEVDRLSIPEHVRIPLTERDRSKCH 349
Query: 380 DLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
LL+ F+ +P W +E+ M+ KAE+QALS+ +LS+ Y+ LK++ W+
Sbjct: 350 ALLKRPFMDSHPAWRQEIEHMLTKGYKAEMQALSTIATSFLSDTYIALKIRNGRWI 405
>gi|390348826|ref|XP_780029.3| PREDICTED: meiotic recombination protein SPO11-like isoform 1
[Strongylocentrotus purpuratus]
Length = 402
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/357 (36%), Positives = 213/357 (59%), Gaps = 5/357 (1%)
Query: 83 DLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKD--KTTLR 140
D++ V IE ++ + I G R S + + E + +K+ K T
Sbjct: 47 DITRQEVLHRIEAVVENVVTCIARGEALYLSYGRRNSWDSVSFREDVGLEMKNDAKMTEV 106
Query: 141 PFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACI 200
F ++ + T+ +K+L+L ++L + + TKRDL+Y+DV+ F Q+ D ++D++ C+
Sbjct: 107 RFDVPTSTNRFTLMLKVLALCYRLVQTDTYSTKRDLYYSDVQSFGSQSIVDDIIDNLCCL 166
Query: 201 LGCTRSSLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMF 259
L R L+V+A KG+V G L F+D +G IDC+ G + ++ + ++ S A F
Sbjct: 167 LQVPRRCLHVLATSKGLVYGDLCFTDASGSYIDCSN-NRTGTQVTNHVGGISNIHSHAKF 225
Query: 260 ILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSD 318
+L++EKDA + ++ +D +R CII+T KG PD+ TR+ +RK+ L +PV ALVD+D
Sbjct: 226 VLIIEKDATFQKIIDDGLMDRMRNCIIITGKGFPDINTRMMVRKLWDTLHIPVFALVDAD 285
Query: 319 PYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTG 378
P+GL IL VY GS+++SY+S +LT P I+WLG+ PSD+ +IPE+ +P++ D+K
Sbjct: 286 PHGLAILFVYKFGSRSLSYESHSLTVPSIRWLGVLPSDVKGLRIPEKALVPLSPSDLKKA 345
Query: 379 KDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
L+ F K+ P W+ EL M+ + KAEIQ+L++ +L++VYLP KL+ WL
Sbjct: 346 SHLMRRPFYKELPQWMSELQEMLHSGYKAEIQSLTAISETFLTDVYLPTKLRCGGWL 402
>gi|449486470|ref|XP_002195778.2| PREDICTED: meiotic recombination protein SPO11 [Taeniopygia
guttata]
Length = 407
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 116/291 (39%), Positives = 188/291 (64%), Gaps = 3/291 (1%)
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRS 206
+ R+ + +KILS+I+++ N + TKRD++Y+D LF Q+ D +++D++C+L R
Sbjct: 118 SARRFALMLKILSMIYKMVQSNTYATKRDIYYSDTLLFGSQSVVDQIINDISCMLKIPRG 177
Query: 207 SLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
SL+V++ KG V G L +++ +G ++CT +P N+ + ++ S A FIL+VEK
Sbjct: 178 SLHVLSTTKGFVAGNLSYTEEDGTKVNCT-CSATAVTVPSNVQGIKNLTSHAKFILIVEK 236
Query: 266 DAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
DA + RL +D F+N+ PCI++T +G PD+ TRL +RK+ ++PV L+D+DP+G++I
Sbjct: 237 DATFQRLLDDNFFNKVSPCIMITGRGVPDLNTRLLVRKLWDSFQIPVFTLMDADPHGVEI 296
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
+ VY GS +MS+++ +LT P +KWLG+ PSDL++ I + +P T+QD + +
Sbjct: 297 MCVYKYGSASMSFEAHHLTVPSVKWLGLLPSDLERLNIRKDALIPFTKQDENKLASIQKR 356
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
++ P W +EL +M +K KAEIQ L+S YLS VYLP KLQ WL
Sbjct: 357 PYIACQPLWKKELEIMAASKLKAEIQVLTSVSSDYLSRVYLPNKLQFGGWL 407
>gi|157427754|ref|NP_001098783.1| meiotic recombination protein SPO11 [Sus scrofa]
gi|147223336|emb|CAN13250.1| SPO11 meiotic protein covalently bound to DSB-like (S. cerevisiae)
[Sus scrofa]
Length = 357
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 118/291 (40%), Positives = 189/291 (64%), Gaps = 4/291 (1%)
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRS 206
+V+ + +KILS+I++L N + TKRD++YTD +LF +QT D +++DV+C+L R
Sbjct: 69 SVKNFALILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDVSCMLKVPRR 128
Query: 207 SLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
SL++ + KG++ G L + ++G ++C A+P NI + ++ +DA F+L+VEK
Sbjct: 129 SLHIFSTSKGLIAGNLRYIEEDGTKVNCA--CATAVAVPSNIQGIWNLITDAKFLLIVEK 186
Query: 266 DAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
DA + RL +D F N+ PCI+VT KG PD+ TRL ++K+ +PV LVD+DP+G++I
Sbjct: 187 DATFQRLLDDNFCNKMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPHGIEI 246
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
+ +Y GS MS+++ NLT P I+WLG+ PSD+ + IP+ +P+T++D +L+
Sbjct: 247 MCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKGTLIPLTKRDQMKLDSILKR 306
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+V P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 307 PYVACQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 357
>gi|149734130|ref|XP_001490003.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Equus
caballus]
Length = 357
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 117/291 (40%), Positives = 190/291 (65%), Gaps = 4/291 (1%)
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRS 206
+V+ + +KILS+I++L N + TKRD++YTD +LF +QT D+++ DV+C+L R
Sbjct: 69 SVKNFALILKILSMIYKLVQSNTYTTKRDIYYTDSQLFGNQTVVDSIITDVSCMLKVPRR 128
Query: 207 SLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
SL++++ KG++ G L + ++G + C+ A+P NI + ++ +DA F+L+VEK
Sbjct: 129 SLHILSTSKGLIAGNLRYIEEDGTKVYCS--CTTAVAVPSNIQGIWNLITDAKFLLIVEK 186
Query: 266 DAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
DA + RL +D F +R PC+IVT KG PD+ TRL ++K+ +P+ LVD+DP+G++I
Sbjct: 187 DATFQRLLDDNFCSRMSPCVIVTGKGVPDLNTRLLVKKLWDVFHVPIFTLVDADPHGIEI 246
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
+ +Y GS +MS+++ NLT P I+WLG+ PSD+ + IP+ +P+T++D +L+
Sbjct: 247 MCIYKYGSMSMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKDALIPLTKRDQMKLDSILKR 306
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+V P W E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 307 PYVTCQPFWRREMEIMANSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 357
>gi|344296529|ref|XP_003419959.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Loxodonta
africana]
Length = 358
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/291 (39%), Positives = 194/291 (66%), Gaps = 3/291 (1%)
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRS 206
+V+ + +KILS++++L N + TKRD++YTD++LF +QT D +++D++C+L R
Sbjct: 69 SVQNFALILKILSMVYKLVQSNTYATKRDIYYTDIQLFGNQTVVDNIINDISCMLKVPRR 128
Query: 207 SLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
SL++++ KG++ G L + ++G ++CT A+P NI + ++ +DA F+L+VEK
Sbjct: 129 SLHILSTSKGLIAGNLSYIEEDGTRVNCTGCSTA-VAVPSNIQGLRNLITDAKFLLIVEK 187
Query: 266 DAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
DA + RL +D F ++ PCI+VT KG PD+ TRL ++K+ +PV LVD+DP+G++I
Sbjct: 188 DATFQRLLDDNFCSKISPCIMVTGKGVPDLNTRLLVKKLWDLFHIPVFTLVDADPHGIEI 247
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
+ +Y GS +MS+++ NLT P I+WLG+ PSD+ + IP+ +P+T++D +L+
Sbjct: 248 MCIYKYGSLSMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKNTLIPLTKRDQMKLDSILKR 307
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
++ P W +E+ +M +K KAEIQAL+ YLS+VYLP KL+ W+
Sbjct: 308 PYITCQPFWRKEMEVMADSKMKAEIQALTFISSDYLSKVYLPNKLKFGGWI 358
>gi|327278047|ref|XP_003223774.1| PREDICTED: meiotic recombination protein SPO11-like [Anolis
carolinensis]
Length = 391
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 185/283 (65%), Gaps = 4/283 (1%)
Query: 155 VKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAE 214
+KI S+++++ NI+ TKRD+FYTD LF +Q D ++ D++C+L R +L++++
Sbjct: 111 LKIFSIVYKMVQTNIYATKRDIFYTDTVLFGNQKVVDDIITDISCMLKIPRRNLHILSTS 170
Query: 215 KGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
KG++ G L + ++G ++CT A+P N++ + ++ +DA FIL+VEKDA + RL
Sbjct: 171 KGLIAGNLSYIEEDGTKVNCTCSTTA--AVPSNVEGMRNLITDAKFILIVEKDATFQRLL 228
Query: 274 EDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGS 332
+D F N+ PCIIVT KG PDV TRL L+K+ +P+ AL+D+DP+G++I+ +Y GS
Sbjct: 229 DDNFCNKMDPCIIVTGKGVPDVNTRLLLKKLWDTCHVPIFALMDADPHGIEIMCIYKYGS 288
Query: 333 KNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPG 392
+MS+++ NLT P ++WLGI PSD ++ IP+ +P++++D L F+
Sbjct: 289 MSMSFEAPNLTVPAVRWLGILPSDFERLNIPKTALIPLSKKDQSKLASLQMRPFIAYQST 348
Query: 393 WVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
W EL++M + KAEIQAL+SF YLS VYLP KLQ W+
Sbjct: 349 WKNELDIMETCQMKAEIQALNSFSSDYLSRVYLPNKLQFGGWI 391
>gi|47229338|emb|CAG04090.1| unnamed protein product [Tetraodon nigroviridis]
Length = 350
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/350 (37%), Positives = 211/350 (60%), Gaps = 12/350 (3%)
Query: 93 IETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASL-----ST 147
IE++IL I S+ +P+R+S + D V T+ S+ S+
Sbjct: 6 IESIILGIVTSLSKDEAPVLVLPNRSSWANV---SFDGSVGLQMTSENSVISIRSNCSSS 62
Query: 148 VRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSS 207
V K TVKILS+I++L N TKRD++Y + +LF Q D+++DD++C+L R +
Sbjct: 63 VTKFAQTVKILSVIYRLVQSNSFATKRDIYYNNTQLFGSQKSVDSIVDDISCLLKVPRRA 122
Query: 208 LNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKD 266
L+V+A KG++ G L + ++G I+C A+ NI + ++ S A F+L+VEKD
Sbjct: 123 LHVLATSKGLISGDLCYMEEDGTRIECN--SSQAVAVSSNIGGIRNIVSSAKFVLIVEKD 180
Query: 267 AAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKIL 325
A + RL +D F + PCII+T KG PDV +RL +RK+ L +P+ ALVD+DP+G++I+
Sbjct: 181 ATFQRLLDDGFCTKLSPCIIITGKGVPDVNSRLMVRKLWDTLHIPIFALVDADPHGIEIM 240
Query: 326 SVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEED 385
+Y GS MS+++ +LT P + WLG+ PSDL + ++P+ LP+T +D LL+
Sbjct: 241 CIYKYGSVAMSFEAHSLTVPSVMWLGLLPSDLQRLRVPQDVLLPLTRRDECKLASLLKRP 300
Query: 386 FVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
++ + P W E+ L+ +TK KAEIQ+LS+ +L+ +YLP KL+ K W+
Sbjct: 301 YLTRQPEWRREMELIQQTKVKAEIQSLSAIAPDFLTNIYLPNKLRYKGWV 350
>gi|348502949|ref|XP_003439029.1| PREDICTED: meiotic recombination protein SPO11-like [Oreochromis
niloticus]
Length = 390
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 127/362 (35%), Positives = 218/362 (60%), Gaps = 7/362 (1%)
Query: 79 REVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDK-- 136
R +++ + + IE++IL+I S+ +P+R+S + + + +
Sbjct: 31 RAEKEINHQEILNRIESIILEIVTSLSKAEAPVLALPNRSSWANVSFDSAIGLQMSSRQS 90
Query: 137 -TTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLD 195
TT+R S+V K +KILS+I++L N + TKRD++Y + KLF Q D+++D
Sbjct: 91 VTTIRSDCP-SSVTKFAQILKILSVIYRLVQSNSYATKRDIYYNNTKLFGSQKAVDSIVD 149
Query: 196 DVACILGCTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQ 254
D++C+L R SL+V+A KG++ G L + ++G IDC NI + ++
Sbjct: 150 DISCMLKVPRRSLHVLATSKGLISGDLCYMEEDGTRIDCNSSSTAVSVSS-NISGIKNIV 208
Query: 255 SDAMFILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLA 313
S A F++++EKDA + RL +D F + PCII+T KG PDV +RL ++++ EL +P+ A
Sbjct: 209 SSAKFVMIIEKDATFQRLLDDDFCTKLSPCIIITGKGVPDVNSRLMVKRLWDELHIPIFA 268
Query: 314 LVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQ 373
LVD+DP+G++I+ +Y GS MS+++ +LT P + WLG+ PSDL + ++P+ +P+T++
Sbjct: 269 LVDADPHGIEIMCIYKYGSVAMSFEAHSLTVPSVMWLGLLPSDLQRLRVPKDALIPLTKR 328
Query: 374 DIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKD 433
D LLE ++ P W +E+ LM + K KAEIQ+L++ +L+++YLP KL+
Sbjct: 329 DESKLCSLLERPYLTSQPEWEKEMKLMQQNKVKAEIQSLTAIAPDFLTQIYLPNKLRYGG 388
Query: 434 WL 435
W+
Sbjct: 389 WI 390
>gi|5453474|gb|AAD43589.1|AF163054_1 meiotic DNA transesterase/topoisomerase homolog variant B [Mus
musculus]
gi|5453483|gb|AAD43592.1| meiotic DNA transesterase/topoisomerase homolog variant B [Mus
musculus]
Length = 354
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 187/291 (64%), Gaps = 7/291 (2%)
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRS 206
+V+K + +K+LS+I++L + + TKRD++YTD +LF +Q D+ +DD++C+L R
Sbjct: 69 SVKKFALILKVLSMIYKLIQSDTYATKRDIYYTDSQLFGNQAAVDSAIDDISCMLKVPRR 128
Query: 207 SLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
SL+V++ KG++ G L + ++G + CT A+P NI MQ A F+L+VEK
Sbjct: 129 SLHVLSTSKGLIAGNLRYMEEDGTRVQCT-CSATATAVPTNIQ---GMQH-AKFLLIVEK 183
Query: 266 DAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
DA + RL +D F +R PCI+VT KG PD+ TRL ++K+ +PV LVD+DPYG++I
Sbjct: 184 DATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPYGIEI 243
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
+ +Y GS +MS+++ NLT P I+WLG+ PSD+ + IP+ +P+T+ D +L+
Sbjct: 244 MCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQMKLDSILKR 303
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
++ P W +EL +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 304 PYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLRFGGWI 354
>gi|326932162|ref|XP_003212189.1| PREDICTED: meiotic recombination protein SPO11-like [Meleagris
gallopavo]
Length = 382
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 133/361 (36%), Positives = 211/361 (58%), Gaps = 21/361 (5%)
Query: 87 SAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLR--PFAS 144
S V IE +IL + +S LA N Q P +N+ + + KD L+ P ++
Sbjct: 31 SEVLEAIENVILDVLKS-LAKN----QAPVLTLANR---SDWRNVEFKDSVGLQMIPHST 82
Query: 145 LSTVR--------KSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDD 196
+R K + +KILS+I+++ N + TKRD++Y+D LF Q D ++++
Sbjct: 83 TKQIRSDCPATAPKFAMMLKILSMIYKMVQSNSYATKRDIYYSDTLLFGSQRVVDDLINE 142
Query: 197 VACILGCTRSSLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVGDMQS 255
++C+L R SL++++ KG V G L +++ +G ++CT G +P N+ + ++ S
Sbjct: 143 ISCMLQIPRRSLHILSTTKGFVAGNLSYTEEDGTKVNCTS-GATAVTVPSNVQGIKNLYS 201
Query: 256 DAMFILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLAL 314
A FIL+VEKDA + RL +D F + PCI++T +G PD+ TRL +RK+ ++P+ L
Sbjct: 202 HAKFILIVEKDATFQRLLDDEFCIKLAPCIMITGRGIPDLNTRLLVRKLWDTFQIPIFTL 261
Query: 315 VDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQD 374
VD+DP+G++I+ +Y GS +MS+++ LT P IKWLG+ PSD+ + I E +P T+QD
Sbjct: 262 VDADPHGVEIMCIYKYGSVSMSFEAHQLTVPCIKWLGLLPSDIKRLNIREDILIPFTKQD 321
Query: 375 IKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDW 434
L + ++ P W EEL +M +K KAEIQ L+S YLS VYLP KLQ W
Sbjct: 322 QNKLTSLQKRPYIACQPAWKEELEIMAASKMKAEIQVLTSLSSDYLSRVYLPNKLQFCGW 381
Query: 435 L 435
+
Sbjct: 382 I 382
>gi|148674665|gb|EDL06612.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae), isoform CRA_b [Mus musculus]
Length = 310
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 187/291 (64%), Gaps = 7/291 (2%)
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRS 206
+V+K + +K+LS+I++L + + TKRD++YTD +LF +Q D+ +DD++C+L R
Sbjct: 25 SVKKFALILKVLSMIYKLIQSDTYATKRDIYYTDSQLFGNQAAVDSAIDDISCMLKVPRR 84
Query: 207 SLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
SL+V++ KG++ G L + ++G + CT A+P NI MQ A F+L+VEK
Sbjct: 85 SLHVLSTSKGLIAGNLRYMEEDGTRVQCT-CSATATAVPTNIQ---GMQH-AKFLLIVEK 139
Query: 266 DAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
DA + RL +D F +R PCI+VT KG PD+ TRL ++K+ +PV LVD+DPYG++I
Sbjct: 140 DATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPYGIEI 199
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
+ +Y GS +MS+++ NLT P I+WLG+ PSD+ + IP+ +P+T+ D +L+
Sbjct: 200 MCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQMKLDSILKR 259
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
++ P W +EL +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 260 PYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLRFGGWI 310
>gi|145312272|ref|NP_001077428.1| meiotic recombination protein SPO11 isoform c [Mus musculus]
gi|5733397|gb|AAD49561.1|AF126400_1 SPO11 protein [Mus musculus]
gi|9367040|gb|AAF87094.1|AF167439_1 SPO11b [Mus musculus]
Length = 371
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 189/304 (62%), Gaps = 16/304 (5%)
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKR-------------DLFYTDVKLFQDQTQSDAV 193
+V+K + +K+LS+I++L + + TKR D++YTD +LF +Q D+
Sbjct: 69 SVKKFALILKVLSMIYKLIQSDTYATKRSNAHSVLTLHLHRDIYYTDSQLFGNQAAVDSA 128
Query: 194 LDDVACILGCTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGD 252
+DD++C+L R SL+V++ KG++ G L + ++G + CT A+P NI +
Sbjct: 129 IDDISCMLKVPRRSLHVLSTSKGLIAGNLRYMEEDGTRVQCT-CSATATAVPTNIQGMQH 187
Query: 253 MQSDAMFILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPV 311
+ +DA F+L+VEKDA + RL +D F +R PCI+VT KG PD+ TRL ++K+ +PV
Sbjct: 188 LITDAKFLLIVEKDATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPV 247
Query: 312 LALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMT 371
LVD+DPYG++I+ +Y GS +MS+++ NLT P I+WLG+ PSD+ + IP+ +P+T
Sbjct: 248 FTLVDADPYGIEIMCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLT 307
Query: 372 EQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+ D +L+ ++ P W +EL +M +K KAEIQAL+ YLS VYLP KL+
Sbjct: 308 KHDQMKLDSILKRPYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLRF 367
Query: 432 KDWL 435
W+
Sbjct: 368 GGWI 371
>gi|388556219|dbj|BAM16279.1| Spo11 [Anguilla japonica]
Length = 385
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 117/301 (38%), Positives = 194/301 (64%), Gaps = 4/301 (1%)
Query: 137 TTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDD 196
TT+R S S+V + +T+K+LS +++L N TKRD++Y D +LF+ Q D+++DD
Sbjct: 87 TTIRSDCS-SSVNRFALTLKVLSAVYKLVQSNTFATKRDIYYNDTQLFRTQRAVDSIVDD 145
Query: 197 VACILGCTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 255
++C+L R SL+V+A KG + G L + ++G ++C+ N+ + ++ S
Sbjct: 146 ISCMLKVPRRSLHVLATSKGFLSGNLSYMEEDGTKVNCSSASTAVSVSS-NVCGIKNISS 204
Query: 256 DAMFILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLAL 314
A F+L+VEKDA + RL +D F ++ PCII+T KG PDV +RL +RK+ L +P+ AL
Sbjct: 205 HAKFVLIVEKDATFQRLLDDGFCSKLAPCIIITGKGVPDVNSRLMVRKLWDTLHVPIFAL 264
Query: 315 VDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQD 374
VD+DP+G++I+ +Y GS +MS+++ NLT P + WLG+ PSD+++ ++P+ +P +++D
Sbjct: 265 VDADPHGIEIMCIYKYGSVSMSFEAQNLTVPSVMWLGLLPSDIERLRLPKDVLIPFSKKD 324
Query: 375 IKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDW 434
LL +V P W +E+ M+K +QKAEIQ+L+S +L+ VYLP KL+ W
Sbjct: 325 ESKLTSLLRRPYVVCQPAWEKEMEKMLKQRQKAEIQSLTSLAPDFLTSVYLPNKLRYGGW 384
Query: 435 L 435
+
Sbjct: 385 I 385
>gi|148674668|gb|EDL06615.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae), isoform CRA_e [Mus musculus]
Length = 327
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 189/304 (62%), Gaps = 16/304 (5%)
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKR-------------DLFYTDVKLFQDQTQSDAV 193
+V+K + +K+LS+I++L + + TKR D++YTD +LF +Q D+
Sbjct: 25 SVKKFALILKVLSMIYKLIQSDTYATKRSNAHSVLTLHLHRDIYYTDSQLFGNQAAVDSA 84
Query: 194 LDDVACILGCTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGD 252
+DD++C+L R SL+V++ KG++ G L + ++G + CT A+P NI +
Sbjct: 85 IDDISCMLKVPRRSLHVLSTSKGLIAGNLRYMEEDGTRVQCT-CSATATAVPTNIQGMQH 143
Query: 253 MQSDAMFILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPV 311
+ +DA F+L+VEKDA + RL +D F +R PCI+VT KG PD+ TRL ++K+ +PV
Sbjct: 144 LITDAKFLLIVEKDATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPV 203
Query: 312 LALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMT 371
LVD+DPYG++I+ +Y GS +MS+++ NLT P I+WLG+ PSD+ + IP+ +P+T
Sbjct: 204 FTLVDADPYGIEIMCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLT 263
Query: 372 EQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+ D +L+ ++ P W +EL +M +K KAEIQAL+ YLS VYLP KL+
Sbjct: 264 KHDQMKLDSILKRPYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLRF 323
Query: 432 KDWL 435
W+
Sbjct: 324 GGWI 327
>gi|345328313|ref|XP_003431261.1| PREDICTED: LOW QUALITY PROTEIN: meiotic recombination protein
SPO11-like [Ornithorhynchus anatinus]
Length = 396
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 119/351 (33%), Positives = 215/351 (61%), Gaps = 5/351 (1%)
Query: 89 VQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLS-- 146
V ++IE +I + +S+ + +R+S + + + + + R S S
Sbjct: 47 VLASIENIIQGVIKSLARNEAPVLILENRSSWGNIKFEDSVGLQMVSHCSTRKVKSDSAI 106
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRS 206
T +K + +K+LS++++L N + TKRD++YT+++LF +Q+ D ++ D++C+L R
Sbjct: 107 TAQKFALILKMLSVVYKLVQSNTYATKRDIYYTNIQLFGNQSVVDNIISDISCMLKVPRR 166
Query: 207 SLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
+L++++ KG++ G L +++ +G ++CT A+ PNI + ++ +DA +IL+VEK
Sbjct: 167 NLHILSTSKGLISGNLSYTEEDGTKVNCT-CSSTAVAVSPNIHGIRNLITDAKYILIVEK 225
Query: 266 DAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
DA + RL +D F ++ PCI++T KG PD+ TRL ++K+ +PV LVD+DP+G++I
Sbjct: 226 DATFQRLLDDNFCHKMSPCIMITGKGVPDLNTRLMIKKLWDTFHIPVFTLVDADPHGIEI 285
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
+ +Y GS +MS+++ NLT P I+WLG+ PSD+++ IP+ +P+T+ D L +
Sbjct: 286 MCIYKYGSLSMSFEAHNLTVPAIRWLGLLPSDIERLNIPKDTLIPLTKHDQTKLDSLQKR 345
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
++ P W +E+ +M ++ KAEIQ L+S YLS VYL KL+ W+
Sbjct: 346 PYIDHQPFWKKEMEIMAASRMKAEIQVLTSLAPDYLSRVYLLNKLKFGGWI 396
>gi|89511867|dbj|BAE86870.1| Spo11 [Anguilla japonica]
Length = 385
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 194/301 (64%), Gaps = 4/301 (1%)
Query: 137 TTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDD 196
TT+R S S+V + +T+K++S +++L N TKRD++Y D +LF+ Q D+++DD
Sbjct: 87 TTIRSDCS-SSVNRFALTLKVMSAVYKLVQSNTFATKRDIYYNDTQLFRTQRAVDSIVDD 145
Query: 197 VACILGCTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 255
++C+L R SL+V+A KG + G L + ++G ++C+ N+ + ++ S
Sbjct: 146 ISCMLKVPRRSLHVLATSKGFLSGNLSYMEEDGTKVNCSSASTAVSVSS-NVCGIKNISS 204
Query: 256 DAMFILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLAL 314
A F+L+VEKDA + RL +D F ++ PCII+T KG PDV +RL +RK+ L +P+ AL
Sbjct: 205 HAKFVLIVEKDATFQRLLDDGFCSKLAPCIIITGKGVPDVNSRLMVRKLWDTLHVPIFAL 264
Query: 315 VDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQD 374
VD+DP+G++I+ +Y GS +MS+++ NLT P + WLG+ PSD+++ ++P+ +P +++D
Sbjct: 265 VDADPHGIEIMCIYKYGSVSMSFEAQNLTVPSVMWLGLLPSDIERLRLPKDVLIPFSKKD 324
Query: 375 IKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDW 434
LL +V P W +E+ M+K +QKAEIQ+L+S +L+ VYLP KL+ W
Sbjct: 325 ESKLTSLLRRPYVVCQPAWEKEMEKMLKQRQKAEIQSLTSLAPDFLTSVYLPNKLRYGGW 384
Query: 435 L 435
+
Sbjct: 385 I 385
>gi|45387775|ref|NP_991245.1| meiotic recombination protein SPO11 [Danio rerio]
gi|41107578|gb|AAH65463.1| SPO11 meiotic protein covalently bound to DSB homolog (S.
cerevisiae) [Danio rerio]
gi|182892100|gb|AAI65825.1| Spo11 protein [Danio rerio]
Length = 383
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 130/362 (35%), Positives = 213/362 (58%), Gaps = 7/362 (1%)
Query: 78 CREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKT 137
C+E D+S V + IE +I +I + G ++ +R+ N + E +VLKD
Sbjct: 25 CQE--DISSQDVLTRIEKVIERIVIDVSKGEAPVLRLINRSCWNNVRFQESVGLVLKDDV 82
Query: 138 TLRPF--ASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLD 195
+ + +T K + +KILS+I++L + + TKRD++Y D +LF Q D+++D
Sbjct: 83 SPKYLHCGKPTTATKFALILKILSIIYKLVQSDSYATKRDIYYNDPQLFGSQRMLDSIVD 142
Query: 196 DVACILGCTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQ 254
D++C+L R SL+++A KG + G L + ++G +DC N++ + ++
Sbjct: 143 DISCMLKVPRRSLHILATSKGFISGDLCYLEEDGTKVDCNSSSTAVSVSS-NVNGIRNIV 201
Query: 255 SDAMFILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLA 313
S A FIL+VEKDA + RL +D F R PCII+T KG PDV +RL +RK+ L +PV A
Sbjct: 202 SSAKFILIVEKDATFQRLLDDDFCARLSPCIIITGKGVPDVNSRLMVRKLWDALHVPVFA 261
Query: 314 LVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQ 373
LVD+DP+G++I+ +Y GS +M++++ +LT P + WLG+ PSD+ +Y++PE+ +P +
Sbjct: 262 LVDADPHGIEIMCIYKYGSVSMAFEAHSLTVPSVLWLGLLPSDIQRYRVPEEALIPFAKA 321
Query: 374 DIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKD 433
D + L ++ P W E+ M K+KAEIQ L+S +L+ VYLP KL+
Sbjct: 322 DERKISSLRSRSYITCQPTWEREVETMQNLKRKAEIQCLASIAPHFLTRVYLPNKLRYGG 381
Query: 434 WL 435
W+
Sbjct: 382 WI 383
>gi|410899931|ref|XP_003963450.1| PREDICTED: meiotic recombination protein SPO11-like [Takifugu
rubripes]
Length = 364
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/350 (36%), Positives = 210/350 (60%), Gaps = 12/350 (3%)
Query: 93 IETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASL-----ST 147
IE++IL I S+ +P+R+S + D V T+ S+ S+
Sbjct: 20 IESVILGIVTSLSKDEAPVLLLPNRSSWTNV---SFDSSVGLQMTSESSVTSVRCDCASS 76
Query: 148 VRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSS 207
V K +KILS+I++L + TKRD+FY + +LF QT D ++DD++C+L +R +
Sbjct: 77 VTKFAQLLKILSVIYKLVQSDSFATKRDIFYNNTRLFGSQTSVDTIVDDISCLLKVSRRA 136
Query: 208 LNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKD 266
L+V+A KG + G L + + +G I C+ + NI + ++ S A F+L+VEKD
Sbjct: 137 LHVLATSKGFISGDLCYMESDGTRISCSSSQAVAVSS--NISGIRNIVSSARFVLIVEKD 194
Query: 267 AAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKIL 325
A + RL +D F + PCI++T KG PD+ +RL +RK+ L +P+ ALVD+DP+G++I+
Sbjct: 195 ATFQRLLDDDFCAKLSPCIMITGKGVPDLNSRLMVRKLWDTLHIPIFALVDADPHGIEIM 254
Query: 326 SVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEED 385
S+Y GS MS+++ +LT P + WLG+ PSDL + ++P+ LP+T++D LL+
Sbjct: 255 SIYKYGSVAMSFEAHSLTVPSVMWLGLLPSDLQRLRVPQDVLLPLTKRDECKLASLLKRP 314
Query: 386 FVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
++ P W E+ LM +T+ KAEIQ+LS+ +L+ +YLP KL+ K W+
Sbjct: 315 YLSSQPQWKREMELMQQTQVKAEIQSLSAIAPDFLTNIYLPNKLRYKGWI 364
>gi|332207876|ref|XP_003253022.1| PREDICTED: LOW QUALITY PROTEIN: meiotic recombination protein SPO11
[Nomascus leucogenys]
Length = 420
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/275 (40%), Positives = 181/275 (65%), Gaps = 6/275 (2%)
Query: 163 QLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRL 222
++C+ N H RD++YTD +LF +QT D +++DV+C+L +R SL++++ KG++ G L
Sbjct: 150 KICILNFH---RDIYYTDSQLFGNQTVVDNIINDVSCMLKVSRRSLHILSTSKGLIAGNL 206
Query: 223 IF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
+ ++G ++CT G A+P NI + ++ +DA F+L+VEKDA + RL +D F N+
Sbjct: 207 RYIEEDGTKVNCT-CGATAVAVPSNIQGIRNLVTDAKFVLIVEKDATFQRLLDDNFCNKL 265
Query: 282 -PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSA 340
PCI++T KG PD+ TRL ++K+ +PV LVD+DP+G++I+ +Y GS +MS+++
Sbjct: 266 SPCIMITGKGVPDLNTRLLVKKLWDTFHVPVFTLVDADPHGIEIMCIYKYGSMSMSFEAH 325
Query: 341 NLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLM 400
+LT P I+WLG+ PSDL + +P+ +P+T++D +L +V P W +E+ +M
Sbjct: 326 HLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMKLDSILRRPYVTCQPFWRKEMEIM 385
Query: 401 VKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 386 ADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 420
>gi|440912496|gb|ELR62058.1| Meiotic recombination protein SPO11 [Bos grunniens mutus]
Length = 408
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 131/367 (35%), Positives = 216/367 (58%), Gaps = 17/367 (4%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
S S V S+IE +I I S+ +F + +R+S + + + + T R S
Sbjct: 43 SSSEVLSSIEKIIQDIVTSLARNEAPAFTIDNRSSWENIKFEDSVGLHMVSHCTTRKIKS 102
Query: 145 LS--TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILG 202
S +V+ + +KI S+I++L N + TKRD++YTD +LF +QT D +++D++C+L
Sbjct: 103 DSPKSVKNFALILKIFSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLK 162
Query: 203 CTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTK----MGMGGKAIPPNIDRVGDMQSDA 257
R SL++++ KG++ G L + ++G ++CT+ + M A P + + +DA
Sbjct: 163 VPRRSLHILSTSKGLIAGDLKYLEEDGTKVNCTRATVSIIMCSCASTPYQTHLY-LITDA 221
Query: 258 MFILLVEKDAAYIRLAEDRFYNRF-PCIIVT--------AKGQPDVATRLFLRKMKMELK 308
F+L+VEKDA + RL +D F N+ PCI+VT KG PD+ TRL ++K+
Sbjct: 222 KFLLIVEKDATFQRLLDDNFCNKMSPCIMVTVYYLLLPQGKGVPDLNTRLLIKKLWDTFH 281
Query: 309 LPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRL 368
+PV LVD+DP+G++I+ +Y GS MS+++ NLT P I+WLG+ PSD+ + IP+ +
Sbjct: 282 IPVFTLVDADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKGTLI 341
Query: 369 PMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLK 428
P+T++D +L+ ++ P W +E+ +M +K KAEIQAL+ YLS VYLP K
Sbjct: 342 PLTKRDQMKLDSILKRPYITCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNK 401
Query: 429 LQQKDWL 435
L+ W+
Sbjct: 402 LKFGGWI 408
>gi|119719577|ref|YP_920072.1| DNA topoisomerase VI subunit A [Thermofilum pendens Hrk 5]
gi|119524697|gb|ABL78069.1| Spo11/DNA topoisomerase [Thermofilum pendens Hrk 5]
Length = 379
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 126/364 (34%), Positives = 207/364 (56%), Gaps = 16/364 (4%)
Query: 87 SAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLS 146
S V + +E+L ++ + +G +P R +N ++ + +VL KT R F +
Sbjct: 16 SEVLAKLESLAKKLVEQMESGVPPYLVIPVRTMANTIWDRKRKLLVLGPKTARREFFDIG 75
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKRDLFY--------TDVK-------LFQDQTQSD 191
++ TV +LSLI Q + T R+L+Y TD + + DQ +S+
Sbjct: 76 ESKRFMQTVLMLSLIVQARREGDYPTIRELYYRGKRTIKYTDERGNKASEETWDDQRESN 135
Query: 192 AVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVG 251
AV+ D+ G R + V KG +VG +I GD ID +KMG G IP +D++
Sbjct: 136 AVIQDIEVATGLLREHMGVTHDAKGRIVGNMIIRSKGDEIDLSKMGSGAWGIPSFVDKIE 195
Query: 252 DMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPV 311
++ +A ++L+VEK A + +L E+ F+ + CI+VT KGQPD +TR +R++ E LPV
Sbjct: 196 ILRVEADYVLVVEKGAVFEKLNEEEFWKKNNCILVTGKGQPDRSTRRMVRRLWEEFGLPV 255
Query: 312 LALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMT 371
L D D YG I SVY GS ++SY+S L TP+ ++LG+ PSD+++Y++ + + T
Sbjct: 256 YILTDGDSYGFYIYSVYRSGSISLSYESERLATPEARFLGVSPSDIERYEL-QGFTIKAT 314
Query: 372 EQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
E+D+K K+L+ + K++ W+EEL L ++ K+K EI+A + G +YLS Y+P K++
Sbjct: 315 ERDLKRAKELMNYPWFKESKRWMEELELFLEKKEKVEIEAFAKHGLKYLSSEYIPKKIKN 374
Query: 432 KDWL 435
K W+
Sbjct: 375 KQWI 378
>gi|363741696|ref|XP_001232076.2| PREDICTED: meiotic recombination protein SPO11 [Gallus gallus]
Length = 382
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 127/361 (35%), Positives = 209/361 (57%), Gaps = 21/361 (5%)
Query: 87 SAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLR--PFAS 144
S V IE +IL + +S+ + +R+ + I KD L+ P +S
Sbjct: 31 SEVLEAIENVILDVLKSLAKKKAPVLTLANRS--------DWRNIEFKDSVGLQMIPHSS 82
Query: 145 LSTVR--------KSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDD 196
+R K + +KILS+I+++ N + TKRD++Y+D LF Q D ++++
Sbjct: 83 TKQIRSDCPATAPKFAMMLKILSMIYKMVQSNSYATKRDIYYSDKLLFGSQRVVDNLINE 142
Query: 197 VACILGCTRSSLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVGDMQS 255
++C+L R SL++++ +G V G L +++ +G ++CT G +P N+ + ++ S
Sbjct: 143 ISCMLQIPRRSLHILSTTRGFVAGNLSYTEEDGTKVNCT-CGATAVTVPSNVQGIKNLYS 201
Query: 256 DAMFILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLAL 314
A FIL+VEKDA + RL +D F + PCI++T +G PD+ TRL +RK+ L++P+ L
Sbjct: 202 HAKFILIVEKDATFQRLLDDEFCIKLAPCIMITGRGIPDLNTRLLVRKLWDTLQIPIFTL 261
Query: 315 VDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQD 374
+D+DP+G++I+ +Y GS +MS+++ LT P IKWLG+ PSD+ + I + +P T+QD
Sbjct: 262 MDADPHGVEIMCIYKYGSVSMSFEAHQLTVPCIKWLGLLPSDIKRLNIRKDVLIPFTKQD 321
Query: 375 IKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDW 434
L + ++ P W +EL +M +K KAEIQ L+S YLS VYLP KLQ W
Sbjct: 322 QNKLASLQKRPYIACQPVWKKELEIMAASKMKAEIQVLTSLSSDYLSRVYLPNKLQFCGW 381
Query: 435 L 435
+
Sbjct: 382 I 382
>gi|449274257|gb|EMC83540.1| Meiotic recombination protein SPO11, partial [Columba livia]
Length = 353
Score = 231 bits (588), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 112/292 (38%), Positives = 186/292 (63%), Gaps = 3/292 (1%)
Query: 146 STVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTR 205
S+ + + +KILS+I+++ N + TKRD++Y+D LF Q+ D +++D++C+L R
Sbjct: 63 SSAPRFALMLKILSMIYKMVQSNTYATKRDIYYSDTLLFGSQSIVDNIINDISCMLQIPR 122
Query: 206 SSLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVE 264
SL++++ KG V G L +++ +G ++CT +P N+ + ++ S A FIL+VE
Sbjct: 123 RSLHILSTTKGFVAGNLSYTEEDGTKVNCT-CSATVFTVPSNVQGIKNLISHAKFILIVE 181
Query: 265 KDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLK 323
KDA + RL +D F + PCI++T +G PD+ TRL +RK+ ++PV L+D+DP+G++
Sbjct: 182 KDATFQRLLDDDFCTKLSPCIMITGRGVPDLNTRLLVRKLWDAFQIPVFTLMDADPHGVE 241
Query: 324 ILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLE 383
I+ +Y GS +MS+++ +LT P IKWLG+ PSDL++ I + +P T+QD + +
Sbjct: 242 IMCIYKYGSVSMSFEAHHLTVPSIKWLGLLPSDLERLNIHKDALIPFTKQDQNKLASIQK 301
Query: 384 EDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
++ P W EL++M +K KAEIQ L+S YLS VYLP KL+ W+
Sbjct: 302 RPYLACQPLWKRELDIMAASKLKAEIQVLTSLSSDYLSRVYLPNKLKFGGWI 353
>gi|302800231|ref|XP_002981873.1| hypothetical protein SELMODRAFT_115310 [Selaginella moellendorffii]
gi|300150315|gb|EFJ16966.1| hypothetical protein SELMODRAFT_115310 [Selaginella moellendorffii]
Length = 284
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/282 (40%), Positives = 176/282 (62%), Gaps = 1/282 (0%)
Query: 155 VKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAE 214
+++L ++ L + H +KRDL+YTD LF+DQ + L D++ L CTRSSL+V++
Sbjct: 2 LRVLQIVQSLLQQGKHASKRDLYYTDPGLFKDQATVNQALTDISVRLKCTRSSLHVVSVG 61
Query: 215 KGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAE 274
KG+++G L F D IDC+ G IP + V D++S A +I++VEK+ + RLA
Sbjct: 62 KGLIMGSLRFKDADRTIDCSVCKSRGYPIPTDAKMVTDIRSCAEYIIVVEKETVFQRLAN 121
Query: 275 DRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKN 334
D F + CI++T +G PDVATR FLR + E LPV LVD+DPYGL IL+ Y GS
Sbjct: 122 DGFCRKNNCIVLTGRGYPDVATRSFLRLLAAETNLPVYGLVDADPYGLDILATYRFGSLT 181
Query: 335 MSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNP-GW 393
M+YD+ L TP I+WLG+ SD + +P++C LP+T D + + +L D+++ W
Sbjct: 182 MAYDAEALATPSIRWLGVFLSDCQTHNVPDRCLLPLTNDDRRKAEAMLNRDYLEHLAFSW 241
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
++L LM++ K E++ALS+ F L++ Y+P K++ +L
Sbjct: 242 NQQLRLMLEKGVKLELEALSASKFSALADDYIPHKIKAAAYL 283
>gi|432865769|ref|XP_004070604.1| PREDICTED: meiotic recombination protein SPO11 [Oryzias latipes]
Length = 399
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 124/360 (34%), Positives = 217/360 (60%), Gaps = 11/360 (3%)
Query: 83 DLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPF 142
++S + S IE++IL+I S+ ++P+R+S + + + D V ++
Sbjct: 44 EISPREILSRIESVILRIVESLSKNEAPVLELPNRSSWSNV---DFDSGVGLQMSSGHSV 100
Query: 143 ASL-----STVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDV 197
++ ++V K +KILS+I++L N + TKRD++Y + +LF Q D ++DD+
Sbjct: 101 TTVKSNCPASVTKFAQILKILSVIYRLVQSNSYATKRDVYYNNTQLFGSQRSVDTIVDDI 160
Query: 198 ACILGCTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSD 256
+C+L +R +L+V+A KG++ G L + ++G IDC + ++ N+ + ++ S
Sbjct: 161 SCMLKVSRRALHVMATSKGLIAGDLCYLEEDGTRIDC-RSSSAAVSVSSNVSGIRNIVSS 219
Query: 257 AMFILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 315
A F+++VEKDA + RL D F + PCI++T KG PDV +RL ++K+ L++P+ ALV
Sbjct: 220 AKFVMIVEKDATFQRLLNDDFCRKLSPCIMITGKGVPDVNSRLMVKKLWDTLQIPIFALV 279
Query: 316 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 375
D+DP+G +I+ +Y GS MS+++ +LT P + WLG+ PSDL + +P++ LP+T +D
Sbjct: 280 DADPHGFEIMCIYKYGSVAMSFEAHSLTVPSVMWLGLLPSDLQRLMVPKRSLLPLTRRDE 339
Query: 376 KTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
LL+ + P W +E+ LM ++K KAEIQ+L+ +L+ +YLP KL+ WL
Sbjct: 340 NKLNSLLKRPYFASQPQWQKEMELMQQSKVKAEIQSLADIAPDFLTSIYLPNKLRFGGWL 399
>gi|356499439|ref|XP_003518548.1| PREDICTED: meiotic recombination protein SPO11-1-like [Glycine max]
Length = 367
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 178/288 (61%), Gaps = 1/288 (0%)
Query: 146 STVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTR 205
S + + ++++ ++ +L N H +KRD++YT +F DQ+ D ++D+ ++ C+R
Sbjct: 77 SHAHRLAVMLRVMLIVQKLLQENKHSSKRDIYYTYPSVFLDQSVVDQAINDICILMQCSR 136
Query: 206 SSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
+LNV++A G+++G + FS+ + DC +P +++ V D+ S A +IL+VEK
Sbjct: 137 HNLNVVSAGNGLIMGWIRFSEGERIFDCISSPNTAHPVPVHVEEVQDIISLAQYILVVEK 196
Query: 266 DAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKIL 325
++ + RLA D+F N CI++T +G PD+ TR FLR + L LP LVD DPYG IL
Sbjct: 197 ESVFQRLANDQFCNANHCIVITGRGYPDIPTRRFLRLLVENLCLPAYCLVDCDPYGFDIL 256
Query: 326 SVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEED 385
+ Y GS M+YD+ +L P+I+WLG PSD ++Y +P QC LP+T +D + + +L
Sbjct: 257 TTYRFGSMQMAYDTKHLRVPEIQWLGAFPSDSERYFVPNQCLLPLTAEDKRKVEAMLLRC 316
Query: 386 FVKKN-PGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQK 432
++++ P W EL L+++ K EI+ALS +LSE Y+P K++ K
Sbjct: 317 YLEREVPQWRLELQLILQRGVKFEIEALSVHALSFLSESYIPSKIEGK 364
>gi|224061220|ref|XP_002300376.1| predicted protein [Populus trichocarpa]
gi|222847634|gb|EEE85181.1| predicted protein [Populus trichocarpa]
Length = 365
Score = 227 bits (578), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 109/278 (39%), Positives = 172/278 (61%), Gaps = 1/278 (0%)
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIA 212
+ +++L ++ +L N H +KRD++Y +F +Q+ D ++D+ +L C+R +LNV++
Sbjct: 75 VLLRVLVIVQKLLQENRHGSKRDIYYMHPSVFSEQSVVDRAINDICILLQCSRHNLNVVS 134
Query: 213 AEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRL 272
G+V+G L F + G DC IP +++ V D+ S A +IL+VEK++ + RL
Sbjct: 135 VGNGLVMGWLQFLEAGRKFDCISSPTTAYTIPVHVEEVKDIVSVANYILIVEKESVFQRL 194
Query: 273 AEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGS 332
A D+F N CI++T +G PD+ TR FLR + +L LPV LVD DPYG IL+ Y GS
Sbjct: 195 ANDKFCNANRCIVITGRGYPDIPTRRFLRLLVEKLCLPVYCLVDCDPYGFDILTTYRFGS 254
Query: 333 KNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKN-P 391
M+YD+ L P+++WLG PSD +KY +P+QC LP+T +D + + +L +++K P
Sbjct: 255 MQMAYDAKILRVPEVQWLGAFPSDFEKYDLPQQCLLPLTAEDKRRTETMLLRCYLQKEVP 314
Query: 392 GWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
W EL LM++ K EI+A S +LSE Y+P K+
Sbjct: 315 EWRLELELMLQKGVKFEIEAFSVHTLSFLSEQYIPSKI 352
>gi|297834134|ref|XP_002884949.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330789|gb|EFH61208.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 362
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/279 (40%), Positives = 170/279 (60%), Gaps = 1/279 (0%)
Query: 155 VKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAE 214
+++L ++ QL N H +KRD++Y F+ Q+ D + D+ + C+R +LNV++
Sbjct: 80 LRVLLIVQQLLQENRHASKRDIYYMHPSAFKAQSIVDRAIGDICILFQCSRYNLNVVSVG 139
Query: 215 KGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAE 274
G+V+G L F + G DC +P ++ V D+ S A +IL+VEK+ + RLA
Sbjct: 140 NGLVMGWLKFREAGRKFDCLNSLNTAYPVPVLVEEVEDIVSLAEYILVVEKETVFQRLAN 199
Query: 275 DRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKN 334
D F CI++T +G PDV+TR FLR + +L LPV LVD DPYG +IL+ Y GS
Sbjct: 200 DMFCKTNRCIVITGRGYPDVSTRRFLRLLMEKLHLPVHCLVDCDPYGFEILATYRFGSMQ 259
Query: 335 MSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKN-PGW 393
M+YD +L PD+KWLG PSD + Y +P+QC LP+TE+D K + LL ++K+ P W
Sbjct: 260 MAYDIESLRAPDMKWLGAFPSDSEIYSVPKQCLLPLTEEDKKRTEALLLRCYLKREMPRW 319
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQK 432
EL M+K K EI+ALS +LSEVY+P K++++
Sbjct: 320 RLELETMLKRGVKFEIEALSVHSLSFLSEVYIPSKIRRE 358
>gi|15231162|ref|NP_187923.1| meiotic recombination protein SPO11-1 [Arabidopsis thaliana]
gi|75335900|sp|Q9M4A2.1|SPO11_ARATH RecName: Full=Meiotic recombination protein SPO11-1;
Short=AtSPO11-1
gi|7270975|emb|CAB81544.1| putative topoisomerase VIA [Arabidopsis thaliana]
gi|114050705|gb|ABI49502.1| At3g13170 [Arabidopsis thaliana]
gi|332641783|gb|AEE75304.1| meiotic recombination protein SPO11-1 [Arabidopsis thaliana]
Length = 362
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 170/279 (60%), Gaps = 1/279 (0%)
Query: 155 VKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAE 214
+++L ++ QL N H +KRD++Y F+ Q+ D + D+ + C+R +LNV++
Sbjct: 80 LRVLLIVQQLLQENRHASKRDIYYMHPSAFKAQSIVDRAIGDICILFQCSRYNLNVVSVG 139
Query: 215 KGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAE 274
G+V+G L F + G DC +P ++ V D+ S A +IL+VEK+ + RLA
Sbjct: 140 NGLVMGWLKFREAGRKFDCLNSLNTAYPVPVLVEEVEDIVSLAEYILVVEKETVFQRLAN 199
Query: 275 DRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKN 334
D F CI++T +G PDV+TR FLR + +L LPV LVD DPYG +IL+ Y GS
Sbjct: 200 DMFCKTNRCIVITGRGYPDVSTRRFLRLLMEKLHLPVHCLVDCDPYGFEILATYRFGSMQ 259
Query: 335 MSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKN-PGW 393
M+YD +L PD+KWLG PSD + Y +P+QC LP+TE+D K + +L ++K+ P W
Sbjct: 260 MAYDIESLRAPDMKWLGAFPSDSEVYSVPKQCLLPLTEEDKKRTEAMLLRCYLKREMPQW 319
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQK 432
EL M+K K EI+ALS +LSEVY+P K++++
Sbjct: 320 RLELETMLKRGVKFEIEALSVHSLSFLSEVYIPSKIRRE 358
>gi|13383478|gb|AAK21002.1| AtSPO11-1 [Arabidopsis thaliana]
Length = 362
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 170/279 (60%), Gaps = 1/279 (0%)
Query: 155 VKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAE 214
+++L ++ QL N H +KRD++Y F+ Q+ D + D+ + C+R +LNV++
Sbjct: 80 LRVLLIVQQLLQENRHASKRDIYYMHPSAFKAQSIVDRAIGDICILFQCSRYNLNVVSVG 139
Query: 215 KGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAE 274
G+V+G L F + G DC +P ++ V D+ S A +IL+VEK+ + RLA
Sbjct: 140 NGLVMGWLKFREAGRKFDCLNSLNTAYPVPVLVEEVEDIVSLAEYILVVEKETVFQRLAN 199
Query: 275 DRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKN 334
D F CI++T +G PDV+TR FLR + +L LPV LVD DPYG +IL+ Y GS
Sbjct: 200 DMFCKTNRCIVITGRGYPDVSTRRFLRLLMEKLHLPVHCLVDCDPYGFEILATYRFGSMQ 259
Query: 335 MSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKN-PGW 393
M+YD +L PD+KWLG PSD + Y +P+QC LP+TE+D K + +L ++K+ P W
Sbjct: 260 MAYDIESLRAPDMKWLGAFPSDSEVYSVPKQCLLPLTEEDKKRTEAMLLRCYLKREMPQW 319
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQK 432
EL M+K K EI+ALS +LSE+Y+P K++++
Sbjct: 320 RLELETMLKRGVKFEIEALSVHSLSFLSEIYIPSKIRRE 358
>gi|118431159|ref|NP_147432.2| DNA topoisomerase VI subunit A [Aeropyrum pernix K1]
gi|150421694|sp|Q9YE67.2|TOP6A_AERPE RecName: Full=Type II DNA topoisomerase VI subunit A
gi|116062483|dbj|BAA79679.2| type II DNA topoisomerase VI subunit A [Aeropyrum pernix K1]
Length = 389
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 122/356 (34%), Positives = 199/356 (55%), Gaps = 24/356 (6%)
Query: 104 ILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQ 163
++ G ++P R SN ++ PE +V+ ++ R F ++ R+ T+ + S+I+Q
Sbjct: 33 VIKGRPPKLEIPKRTLSNTIFDPERGILVIGEEKLEREFLNVGESRRFMQTLLMASIIYQ 92
Query: 164 LCLRNIHVTKRDLFYT---------------DVKLFQDQTQSDAVLDDVACILGCTRSSL 208
+ N + T RDL+Y + + +Q +SD+V+ D+ G R +
Sbjct: 93 SLIENEYPTIRDLYYKGKHTIVYRDYSGRKREENTWDEQKESDSVIQDIEVYTGLFREDM 152
Query: 209 NVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAA 268
+++ EKG VVG + GD+ID +K+G G AI P D + + DA F+L+VEKDA
Sbjct: 153 LILSKEKGKVVGNMRIRSGGDVIDLSKLGHGAYAIEPTPDLIEFLDVDAEFVLVVEKDAV 212
Query: 269 YIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVY 328
+ +L F+ ++ ++VT GQPD ATR F+R++ ELKLPV + DSDPYG I SVY
Sbjct: 213 FQQLHRAGFWKKYKALLVTGSGQPDRATRRFVRRLHEELKLPVYIITDSDPYGWYIYSVY 272
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYK-----IPEQCR----LPMTEQDIKTGK 379
GS +SY+S L TP K+LG++ +D+ Y+ + E R + T++DIK K
Sbjct: 273 KVGSITLSYESERLATPKAKFLGVQMTDIFGYRGKKPYLSEAERKKFMIKATDKDIKRAK 332
Query: 380 DLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+LL ++ KN W E+ L +K K EI+A++S G ++ + Y+P K++ DW+
Sbjct: 333 ELLNYSWIGKNRRWNVEIRLFLKHLVKLEIEAIASKGLKFFAYQYIPEKIETGDWI 388
>gi|225461890|ref|XP_002264649.1| PREDICTED: meiotic recombination protein SPO11-1-like [Vitis
vinifera]
Length = 361
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 110/269 (40%), Positives = 166/269 (61%), Gaps = 1/269 (0%)
Query: 163 QLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRL 222
QL N H +KRD++Y +F DQ+ D ++D+ +L C+R +LNV++ KG+V+G L
Sbjct: 88 QLLQENRHGSKRDIYYMHPSVFSDQSVVDRAINDICILLQCSRHNLNVVSVGKGLVMGWL 147
Query: 223 IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFP 282
F + G DC +P +++ V D+ S A +IL+VEK++ + RLA D+F N+
Sbjct: 148 RFLEAGKKFDCINGPNTAYPVPVHVEEVKDIVSVAQYILVVEKESVFQRLANDKFCNKNR 207
Query: 283 CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANL 342
CI++T +G PD+ TR FLR + +L L V LVD DPYG IL+ Y GS M+YD+ L
Sbjct: 208 CIVITGRGYPDIPTRRFLRLLVEKLHLHVYCLVDCDPYGFDILTTYRFGSMQMAYDAKFL 267
Query: 343 TTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKN-PGWVEELNLMV 401
P+I+WLG PSD +KY +PE C LP+T +D + + +L ++++ W EL LM+
Sbjct: 268 RVPEIEWLGAFPSDSEKYGLPEPCLLPLTAEDKRKTEAILHRCYLQQELLHWRLELELML 327
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
+ K EI+ALS +LSE Y+P K+Q
Sbjct: 328 QRGVKFEIEALSVHSLSFLSENYIPSKIQ 356
>gi|86159261|ref|YP_466046.1| DNA topoisomerase VI subunit A [Anaeromyxobacter dehalogenans
2CP-C]
gi|85775772|gb|ABC82609.1| DNA topoisomerase, type IIB [Anaeromyxobacter dehalogenans 2CP-C]
Length = 367
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 125/357 (35%), Positives = 197/357 (55%), Gaps = 19/357 (5%)
Query: 93 IETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKST 152
IETL + RS+ G ++P R+ +N + P I LKD+ R F ++S +K
Sbjct: 15 IETLAESVLRSVKGGKNPFLEIPVRSLANVQFNPRKRLIELKDQKQKRYFFNVSMAKKFM 74
Query: 153 ITVKILSLIHQLCLRNIHVTK----RDLFY--------TDVKLFQDQTQSDAVLDDVACI 200
T L+ + C I K RDL+Y T F++Q +SD +++D+
Sbjct: 75 QTF----LVSEACKELIDAGKTTSIRDLYYMTKHALGETRQNTFEEQEESDPIIEDLEVA 130
Query: 201 LGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDR--VGDMQSDAM 258
+ R L++ A+ +G +VG L D GD ID +MG GG ++P ++ V +S+A
Sbjct: 131 IDALREELHLFASGRGSMVGPLSIRDAGDAIDLRRMGSGGWSVPSIVEEHVVQFGKSEAR 190
Query: 259 FILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSD 318
++LL+EKDA + R ED+F+ R CIIVT GQP R ++++ EL LPV LVD+D
Sbjct: 191 YVLLIEKDAVWKRFNEDKFWAREKCIIVTGLGQPPRGVRRIVQRLHSELGLPVYVLVDND 250
Query: 319 PYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTG 378
P+G I SV GS N++Y+S + P +++G+ D K+K+P + M +QD
Sbjct: 251 PWGFYIYSVLKQGSINLAYESMRMAVPKARFIGLSSFDKAKFKLPGNVSIRMNDQDDARA 310
Query: 379 KDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
K +L + K+P W E+ MV++ +K E++ALS G +++E YLP KL+ +DWL
Sbjct: 311 KQMLAYPWF-KDPKWQREIQEMVRSGEKYELEALSRRGISFITEEYLPKKLRDRDWL 366
>gi|18313188|ref|NP_559855.1| DNA topoisomerase VI subunit A [Pyrobaculum aerophilum str. IM2]
gi|18160702|gb|AAL64037.1| DNA topoisomerase VI (type II ) subunit a [Pyrobaculum aerophilum
str. IM2]
Length = 367
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/358 (34%), Positives = 205/358 (57%), Gaps = 17/358 (4%)
Query: 93 IETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKST 152
+E+ Q+A++IL ++P+R SN ++ + + L + R F + RK
Sbjct: 11 LESWGTQLAKAILELEEPIMEIPARTLSNTIWDEKARMLKLGPEKLHRRFLDVKEARKFM 70
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVK--LFQD-------------QTQSDAVLDDV 197
TV +L LI + +++ T RDL+Y +F+D Q++S+AV++D+
Sbjct: 71 QTVLMLRLIVEAIREDVYPTIRDLYYNGKHTIVFKDPLGRTHRENTWDEQSESNAVIEDI 130
Query: 198 ACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDA 257
R + V A KG +VG ++ G +D +K G ++P N+D + ++ +A
Sbjct: 131 EVATNVLREEMGVSADVKGKIVGPIVVRSQGYELDASKFGETALSLPVNVDALEIVKVEA 190
Query: 258 MFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDS 317
++L+VEKDA + RL ++F+++ I+VTAKG PD ATR F+R++ E KLPV L D
Sbjct: 191 SYVLVVEKDAIFQRLVREKFWSQEGAILVTAKGMPDRATRRFIRRLNEEYKLPVYVLTDG 250
Query: 318 DPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKT 377
DPYG I SVY GS +SY+S L TPD K+LG+ +D+D YKI + + ++DIK
Sbjct: 251 DPYGWYIYSVYKSGSIKLSYESERLATPDAKFLGLTATDIDTYKISDNYVIAANDRDIKR 310
Query: 378 GKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
++LL + +K P W E+NL +K K+K EI+ALS+ G ++L + YL K++ K ++
Sbjct: 311 AQELLRYPWFQK-PEWTREINLFLKKKKKVEIEALSTHGLKFLHD-YLRDKIRSKKFI 366
>gi|397618186|gb|EJK64792.1| hypothetical protein THAOC_14439 [Thalassiosira oceanica]
Length = 138
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/138 (72%), Positives = 123/138 (89%)
Query: 298 LFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL 357
+FL ++ EL++PVLALVDSDPYGLKILSVY GSKNMSYDSA+LTTPDIKWLG+RPSDL
Sbjct: 1 MFLSRITSELQIPVLALVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGLRPSDL 60
Query: 358 DKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGF 417
++Y +P+QCRL MTE DIKTGK+LL+E F+ KNP W++EL +MVKTK+KAEIQALSSFGF
Sbjct: 61 NRYDLPDQCRLKMTENDIKTGKELLQEAFIAKNPLWMKELQIMVKTKEKAEIQALSSFGF 120
Query: 418 QYLSEVYLPLKLQQKDWL 435
QY++E YLP KL++ DW+
Sbjct: 121 QYITEEYLPRKLREGDWI 138
>gi|302037397|ref|YP_003797719.1| DNA topoisomerase VI subunit A [Candidatus Nitrospira defluvii]
gi|300605461|emb|CBK41794.1| DNA topoisomerase VI, subunit A [Candidatus Nitrospira defluvii]
Length = 368
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 193/335 (57%), Gaps = 11/335 (3%)
Query: 111 SFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIH 170
+F++P RA SN + P I + +K R F ++ +K T+ + + +L ++
Sbjct: 34 TFEIPIRALSNVSFNPRRGLIEMGEKKQSRSFFNVGMAKKFMQTMLVADALAELQQADLT 93
Query: 171 VTKRDLFYTDVKLFQD--------QTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRL 222
+ R+++Y QD Q +SD +++D+ L R L+V A G +VG +
Sbjct: 94 TSLREIYYRTKHTIQDSHENTFDTQDESDPIIEDLEVSLIALREELHVRAENSGSIVGPV 153
Query: 223 IFSDNGDMIDCTKMGMGGKAIPPNID--RVGDMQSDAMFILLVEKDAAYIRLAEDRFYNR 280
+F D+GD +DC K+G GG ++P ++ + + A F+LLVEK + RL+ED+F+ R
Sbjct: 154 VFGDDGDRVDCAKLGKGGYSVPSIVEPEYLEIRRCTADFLLLVEKGTQWNRLSEDKFWRR 213
Query: 281 FPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSA 340
+ C+++T GQP R R++ E KLPV LVD+DP+G I SV GS N++++S
Sbjct: 214 YNCVLLTGNGQPPRGVRRLARRLHEEHKLPVYVLVDNDPWGYYIYSVVKQGSINLAFESQ 273
Query: 341 NLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLM 400
+ P K++G+ +D ++Y++P + + E+DI K+LL + +K P W +E+ M
Sbjct: 274 RMAIPKAKFIGLSSADPERYELPRNVGIKLNEKDITRAKELLNYQWFQK-PAWQQEIKRM 332
Query: 401 VKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+ + K E+ AL++ FQYL++ YLP KL++KDWL
Sbjct: 333 LTSGLKYELDALANKDFQYLTKKYLPRKLKEKDWL 367
>gi|197123330|ref|YP_002135281.1| DNA topoisomerase VI subunit A [Anaeromyxobacter sp. K]
gi|196173179|gb|ACG74152.1| DNA topoisomerase (ATP-hydrolyzing) [Anaeromyxobacter sp. K]
Length = 367
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 121/353 (34%), Positives = 194/353 (54%), Gaps = 11/353 (3%)
Query: 93 IETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKST 152
IE L + RS+ G ++P R+ +N + P I LKD+ R F ++S +K
Sbjct: 15 IEKLAETVLRSVKGGKNPFLEIPVRSLANVQFNPRKRLIELKDQKQRRYFFNVSMAKKFM 74
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFY--------TDVKLFQDQTQSDAVLDDVACILGCT 204
T + +L + RDL+Y T F++Q +SD +++D+ +
Sbjct: 75 QTFLVSDACKELIDAGKTTSIRDLYYMTKHALGETRQNTFEEQEESDPIIEDLEVAIDAL 134
Query: 205 RSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDR--VGDMQSDAMFILL 262
R L++ A+ +G +VG L D GD ID +MG GG ++P ++ V +S+A ++LL
Sbjct: 135 REELHLFASGRGSMVGPLSIRDAGDAIDLRRMGSGGWSVPSIVEEHVVQFGKSEAKYVLL 194
Query: 263 VEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGL 322
+EKDA + R ED+F+ R CIIVT GQP R ++++ EL LPV LVD+DP+G
Sbjct: 195 IEKDAVWKRFNEDKFWAREKCIIVTGLGQPPRGVRRIVQRLHSELGLPVYVLVDNDPWGF 254
Query: 323 KILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLL 382
I SV GS N++Y+S + P +++G+ D K+K+P + M +QD K +L
Sbjct: 255 YIYSVLKQGSINLAYESMRMAVPKARFIGLSSFDKAKFKLPGNVSIRMNDQDDARAKQML 314
Query: 383 EEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+ K+P W E+ MV++ +K E++ALS G +++E YLP KL+ +DWL
Sbjct: 315 AYPWF-KDPKWQREIQEMVRSGEKYELEALSRRGISFITEEYLPRKLRDRDWL 366
>gi|220918120|ref|YP_002493424.1| DNA topoisomerase VI subunit A [Anaeromyxobacter dehalogenans
2CP-1]
gi|219955974|gb|ACL66358.1| DNA topoisomerase (ATP-hydrolyzing) [Anaeromyxobacter dehalogenans
2CP-1]
Length = 367
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 121/353 (34%), Positives = 194/353 (54%), Gaps = 11/353 (3%)
Query: 93 IETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKST 152
IE L + RS+ G ++P R+ +N + P I LKD+ R F ++S +K
Sbjct: 15 IEKLAETVLRSVKGGKNPFLEIPVRSLANVQFNPRKRLIELKDQKQRRYFFNVSMAKKFM 74
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFY--------TDVKLFQDQTQSDAVLDDVACILGCT 204
T + +L + RDL+Y T F++Q +SD +++D+ +
Sbjct: 75 QTFLVSDACKELIDAGKTTSIRDLYYMTKHALGETRQNTFEEQEESDPIIEDLEVAIDAL 134
Query: 205 RSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDR--VGDMQSDAMFILL 262
R L++ A+ +G +VG L D GD ID +MG GG ++P ++ V +S+A ++LL
Sbjct: 135 REELHLFASGRGSMVGPLSIRDAGDAIDLRRMGSGGWSVPSIVEEHVVQFGKSEAKYVLL 194
Query: 263 VEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGL 322
+EKDA + R ED+F+ R CIIVT GQP R ++++ EL LPV LVD+DP+G
Sbjct: 195 IEKDAVWKRFNEDKFWAREKCIIVTGLGQPPRGVRRIVQRLHSELGLPVYVLVDNDPWGF 254
Query: 323 KILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLL 382
I SV GS N++Y+S + P +++G+ D K+K+P + M +QD K +L
Sbjct: 255 YIYSVLKQGSINLAYESMRMAVPKARFIGLSSFDKAKFKLPGNVSIRMNDQDDARAKQML 314
Query: 383 EEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+ K+P W E+ MV++ +K E++ALS G +++E YLP KL+ +DWL
Sbjct: 315 AYPWF-KDPKWQREIQEMVRSGEKYELEALSRRGISFVTEEYLPRKLRDRDWL 366
>gi|126459556|ref|YP_001055834.1| DNA topoisomerase VI subunit A [Pyrobaculum calidifontis JCM 11548]
gi|126249277|gb|ABO08368.1| Spo11/DNA topoisomerase VI, subunit A-like protein [Pyrobaculum
calidifontis JCM 11548]
Length = 367
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 120/353 (33%), Positives = 202/353 (57%), Gaps = 17/353 (4%)
Query: 93 IETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKST 152
+E+ ++A+++L ++P+R SN ++ + + L ++ R F L R+
Sbjct: 11 LESWGAELAKAVLELKEPVMEIPARTLSNTIWDEKAKILRLGNEKIHRRFLDLKEARRFM 70
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVKL---------------FQDQTQSDAVLDDV 197
TV +L LI + +++ T RDL+Y + +Q +S+AV++D+
Sbjct: 71 QTVLMLRLIVEAIREDVYPTIRDLYYNGKHTIVYKDPLGRTHRENTWDEQDESNAVIEDI 130
Query: 198 ACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDA 257
R + V A KG +VG +I G +D +K G ++P N+D + ++ +A
Sbjct: 131 EVATNVLREEMGVSADVKGKIVGPIIVRSQGYELDASKFGETALSLPVNVDALEIVKVEA 190
Query: 258 MFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDS 317
++L+VEKDA + RL ++F+++ CI+VTAKG PD ATR F+R++ E KLPV L D
Sbjct: 191 AYVLVVEKDAIFQRLVREKFWSQENCILVTAKGMPDRATRRFIRRLNEEYKLPVYVLTDG 250
Query: 318 DPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKT 377
DPYG I SVY GS +SY+S L TP+ K+LG+ +D+D YKI + + ++D+K
Sbjct: 251 DPYGWYIYSVYKSGSIKLSYESERLATPEAKFLGLTATDIDAYKISDNYVIAANDRDVKR 310
Query: 378 GKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
++LL + +K P W +E+NL +K K+K EI+ALS+ G ++L + YL K++
Sbjct: 311 AQELLRYPWFQK-PEWTKEINLFLKKKKKVEIEALSTHGLKFLHD-YLRDKIR 361
>gi|159042113|ref|YP_001541365.1| DNA topoisomerase VI subunit A [Caldivirga maquilingensis IC-167]
gi|157920948|gb|ABW02375.1| DNA topoisomerase (ATP-hydrolyzing) [Caldivirga maquilingensis
IC-167]
Length = 369
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 122/339 (35%), Positives = 195/339 (57%), Gaps = 18/339 (5%)
Query: 113 QVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVT 172
++P+R +N ++ + +VL K R F L+ ++ T +L LI Q N++ T
Sbjct: 32 RIPARTLTNIIWDEKRKILVLGPKAIERRFLDLNEAKRFMQTTLMLKLIIQSIKENVYPT 91
Query: 173 KRDLFYT--------DVKL--------FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKG 216
RDL+Y + KL + +Q++S+AV++D+ G R + V A KG
Sbjct: 92 IRDLYYNGKHTMELNEPKLSKSFRENTWDEQSESNAVIEDIEVATGVLREEMGVSADVKG 151
Query: 217 VVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDR 276
VVG ++ G ID TKMG ++PPN D + ++ DA ++L+VEKDA + RL +
Sbjct: 152 KVVGPIVVRSKGFEIDATKMGDTALSLPPNPDELDIVRMDAKYVLVVEKDAIFQRLNREG 211
Query: 277 FYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMS 336
++N C++VTAKG PD ATR F+R++ + LPV D DPYG I SVY GS +S
Sbjct: 212 YWNSEKCLLVTAKGMPDRATRRFVRRLSEDYGLPVYVFTDGDPYGWYIYSVYRSGSIKLS 271
Query: 337 YDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEE 396
Y++ L TPD K++G+ SD+ KYKI + + T++DIK ++L + + + + W E
Sbjct: 272 YENERLATPDAKFIGVTASDISKYKISDNYVIKATDRDIKRAQELKKYPWFQSHE-WKRE 330
Query: 397 LNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
L+L ++T++K EI+ALS+ G ++L E YL K+ W+
Sbjct: 331 LDLFLRTRKKVEIEALSTHGLKFLHE-YLLDKIHNNKWI 368
>gi|153005629|ref|YP_001379954.1| DNA topoisomerase VI subunit A [Anaeromyxobacter sp. Fw109-5]
gi|152029202|gb|ABS26970.1| DNA topoisomerase (ATP-hydrolyzing) [Anaeromyxobacter sp. Fw109-5]
Length = 367
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 117/353 (33%), Positives = 193/353 (54%), Gaps = 11/353 (3%)
Query: 93 IETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKST 152
IE L + RS+ G ++P R+ +N + I L + R F ++S +K
Sbjct: 15 IEKLADSVVRSVKGGKNPFVEIPIRSLANVKFNERRRLIELGSQKQKRYFFNVSMAKKFM 74
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFY--------TDVKLFQDQTQSDAVLDDVACILGCT 204
T + +L + RDL+Y T F++Q +SD +++D+ +
Sbjct: 75 QTFLVSEACKELIDSGKTTSIRDLYYMTKHTLGETKQNTFEEQEESDPIIEDLEVAIDSL 134
Query: 205 RSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDR--VGDMQSDAMFILL 262
R L++ A +G +VG + D+GD ID +MG GG ++P ++ V +++A ++LL
Sbjct: 135 REELHLFATGRGSMVGPMTIRDSGDTIDLRRMGSGGWSVPSIVEEHVVQFTKTEAKYVLL 194
Query: 263 VEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGL 322
+EKDA + R ED+F+ R C+IVT +GQP R ++++ ELKLPV LVD+DP+G
Sbjct: 195 IEKDAVWRRFNEDKFWQREKCVIVTGQGQPPRGVRRLVQRLHTELKLPVYVLVDNDPWGF 254
Query: 323 KILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLL 382
I SV GS N++Y+S + PD +++G+ D YK+P+ + M +QD K +L
Sbjct: 255 YIYSVMKQGSINLAYESMRMAVPDARFIGLSSFDKATYKLPDNVAIKMNDQDNARAKQML 314
Query: 383 EEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+ ++ P W E+ MV + QK E++ALS G +++E YLP KL+ +DWL
Sbjct: 315 AYPWFQR-PKWQREIEEMVHSGQKYELEALSRRGISFITEEYLPRKLRDRDWL 366
>gi|255563518|ref|XP_002522761.1| meiotic recombination protein spo11, putative [Ricinus communis]
gi|223537999|gb|EEF39612.1| meiotic recombination protein spo11, putative [Ricinus communis]
Length = 373
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 114/295 (38%), Positives = 176/295 (59%), Gaps = 13/295 (4%)
Query: 149 RKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSL 208
R+ + +++L ++ QL N H +KRD++Y +F DQ+ D ++D+ IL C+R +L
Sbjct: 74 RRIDVMLRVLVIVQQLLQENKHGSKRDIYYMHPSVFSDQSVVDQAINDICIILQCSRHNL 133
Query: 209 NVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAA 268
NV++ G+V+G L F + G DC IP +++ V D+ S A +IL+VEK++
Sbjct: 134 NVVSVGTGLVMGWLRFLEAGRKFDCINSPNNVHPIPIHVEEVKDIVSVAKYILVVEKESV 193
Query: 269 YIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVY 328
+ RLA D F N CI++T +G PD+ TR FLR + +L LPV LVD DPYG IL+ Y
Sbjct: 194 FQRLANDWFCNAHRCIVITGRGYPDIPTRRFLRLLLEKLGLPVYCLVDCDPYGFDILTTY 253
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVK 388
GS M+YD+ L P+I+WLG PSDL+KY +P+ C LP+T++D + + +L +++
Sbjct: 254 RFGSMLMAYDAKFLRVPEIRWLGAFPSDLEKYGLPQHCLLPLTDEDRRRTETMLLRCYLQ 313
Query: 389 KN-PGWVE------------ELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
+ P W EL M++ K EI+ALS +LSE+Y+P K+Q
Sbjct: 314 REAPEWSYIMKWYYLFHERLELESMLQRGVKFEIEALSVHSLSFLSELYIPSKIQ 368
>gi|405969559|gb|EKC34523.1| Meiotic recombination protein SPO11 [Crassostrea gigas]
Length = 614
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 185/298 (62%), Gaps = 3/298 (1%)
Query: 136 KTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLD 195
K T F S +++K T+ +K+LS+I++L TKRDL+Y D LF +QT D L+
Sbjct: 315 KMTSVRFDSKQSIKKFTLMMKLLSMIYRLIQTGSFCTKRDLYYQDTTLFGNQTALDEALE 374
Query: 196 DVACILGCTRSSLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVGDMQ 254
+V+C++ R L+V+A KG + G L F D +G+ +DC++ G +P +I+ + +Q
Sbjct: 375 NVSCMIQVPRWRLHVLATSKGCIAGNLCFHDVDGNYVDCSQTK-AGIQVPSHIEGLEHIQ 433
Query: 255 SDAMFILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLA 313
+DA F+L+VEKDA + RL + F R PCI++T KG PD+ TR+ L ++ E
Sbjct: 434 TDADFVLVVEKDAIFQRLLSEGFCERMRPCIVITGKGFPDMNTRMLLNRLWREFSPKFYI 493
Query: 314 LVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQ 373
LVD+DPYG++I++VY GS+++S+++ LT P ++WLG+ PSD+ + ++ + + +
Sbjct: 494 LVDADPYGIEIMTVYKYGSRSLSFEAPMLTVPGLEWLGVLPSDIQRLRLKDDSFIDLKLS 553
Query: 374 DIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
D D+L ++ K+ +ELN+++ +KAEI++L S +L+ VYLP KL+
Sbjct: 554 DRNKITDILARPYISKSQLLYKELNVLLDLGKKAEIESLDSISTSFLTNVYLPTKLKH 611
>gi|119872373|ref|YP_930380.1| DNA topoisomerase VI subunit A [Pyrobaculum islandicum DSM 4184]
gi|119673781|gb|ABL88037.1| Spo11/DNA topoisomerase VI, subunit A, N-terminal domain protein
[Pyrobaculum islandicum DSM 4184]
Length = 367
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 122/358 (34%), Positives = 204/358 (56%), Gaps = 17/358 (4%)
Query: 93 IETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKST 152
+E+ +A+SIL ++P+R SN ++ + + L + R F + RK
Sbjct: 11 LESWGHDLAKSILELREPVMEIPARTLSNTIWDEKSKMLKLGPEKMHRRFLDVKESRKFM 70
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVK--LFQD-------------QTQSDAVLDDV 197
TV +L LI + +++ T RDL+Y +F+D QT+S+ V++D+
Sbjct: 71 QTVLMLRLIVEAIREDVYPTIRDLYYNGKHTIVFKDPLGRVHRENTWDEQTESNTVIEDI 130
Query: 198 ACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDA 257
R + + A KG +VG ++ G +D +K G ++P N+D + ++ +A
Sbjct: 131 EVATNVLREEMGISADVKGKIVGPIVVRSQGYELDASKFGETALSLPVNVDALEIIKVEA 190
Query: 258 MFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDS 317
++L+VEKDA + RL ++F+++ I+VTAKG PD ATR F+R++ E KLPV L D
Sbjct: 191 AYVLVVEKDAIFQRLVREKFWSQENAILVTAKGMPDRATRRFIRRLNEEYKLPVYVLTDG 250
Query: 318 DPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKT 377
DPYG I SVY GS +SY+S L TP+ K+LG+ +D+D YKI + + ++DIK
Sbjct: 251 DPYGWYIYSVYKSGSIKLSYESERLATPNAKFLGLTATDIDAYKISDNYVIAANDRDIKR 310
Query: 378 GKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
++LL + +K P W +E+NL +K K+K EI+ALS+ G ++L + YL K++ + ++
Sbjct: 311 AQELLRYPWFQK-PEWTKEINLFLKKKKKVEIEALSTHGLKFLHD-YLRDKIRNQKFI 366
>gi|449690981|ref|XP_002162299.2| PREDICTED: meiotic recombination protein SPO11-like [Hydra
magnipapillata]
Length = 348
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 111/296 (37%), Positives = 187/296 (63%), Gaps = 5/296 (1%)
Query: 142 FASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACIL 201
+ L ++RK TI + L ++L L H TKRD++Y++V LF Q D L +++C+L
Sbjct: 56 LSHLPSLRKYTIMMVCLCHCYKLILMGKHSTKRDIYYSNVNLFVCQGYVDDCLANISCML 115
Query: 202 GCTRSSLNVIAAEKGVVVGRLIFSDNGDM-IDCTKMGMGGKAIPPNIDRVGDMQSDAMFI 260
G R+SLNV+++ KG++ G L +++ ++ ++C IP I+ + +Q A +I
Sbjct: 116 GVPRNSLNVLSSAKGLIYGCLKYTNQNNLTVNCYDQV---TQIPSEIESIQIIQITARYI 172
Query: 261 LLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDP 319
L++EK+A + R+AE F + +I+T KG PDV TR+ L K+ + +PV ALVD+DP
Sbjct: 173 LVIEKEAIFQRIAEHGFQEKLGHSLIITGKGFPDVNTRMLLNKICKHVSIPVFALVDADP 232
Query: 320 YGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGK 379
+G++I+ VY GSK+MSY++ +LT P +KWLGI P D+ +IP + +P+++ D K
Sbjct: 233 HGIEIMFVYKFGSKSMSYEAEHLTCPSMKWLGILPKDIIGMRIPNRVLIPLSQNDNKKLL 292
Query: 380 DLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
DL+ +V +N + E++N + ++ KAEI+ L S Y++++YLPLKL+ W+
Sbjct: 293 DLMNRPYVLQNKDYKEQINFLHESGLKAEIECLDSISHTYITDIYLPLKLRNGVWI 348
>gi|357493057|ref|XP_003616817.1| DNA topoisomerase 6 subunit A [Medicago truncatula]
gi|355518152|gb|AES99775.1| DNA topoisomerase 6 subunit A [Medicago truncatula]
Length = 275
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 120/278 (43%), Positives = 165/278 (59%), Gaps = 7/278 (2%)
Query: 116 SRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRD 175
S A+S Q+YV E DR +LK K L + + L+LI L N + TKR+
Sbjct: 2 SNATSLQVYVDEFDRYMLKAKAF-----KLEDEKIFDHILNHLTLIIYLLKDNSYSTKRE 56
Query: 176 LFYTDVKLFQ-DQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCT 234
+Y+D +LF+ Q SD L+ +A +L C + L V A +G VVG L F G IDC
Sbjct: 57 FYYSDKELFEYKQENSDEALEHIALLLYCCKDCLPVYADNRGKVVGELQFEYGGLEIDCR 116
Query: 235 KMGMGGKAIPPNIDRVGDM-QSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPD 293
K + G IP +D + M + +A+FILLVE A + L F RFPCIIV G PD
Sbjct: 117 KTDLLGHPIPLRVDCMTKMTKREALFILLVESVATLVSLHSAGFEQRFPCIIVAGSGVPD 176
Query: 294 VATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIR 353
V +R +RK+ ++LKLPVLALVD D YG +IL++Y GS+ M+YDS NLTTP+I WLG+R
Sbjct: 177 VCSRKLVRKLSLDLKLPVLALVDGDLYGFRILTIYNKGSQKMAYDSENLTTPNIYWLGVR 236
Query: 354 PSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNP 391
P D D Y IP C ++ ++K+ K L+ + F+K +P
Sbjct: 237 PCDADHYDIPSGCIKQLSPTELKSVKSLMAKPFMKNHP 274
>gi|168003862|ref|XP_001754631.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694252|gb|EDQ80601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 292
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 178/291 (61%), Gaps = 10/291 (3%)
Query: 155 VKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQ----TQSDAVLDDVACILGCTRSSLNV 210
+K+L ++ L +N H TKRD++Y D L + Q ++ D ++D+ C C+R SLN+
Sbjct: 2 LKVLQIVEVLLQQNRHATKRDVYYNDTALLKGQMVIYSRLDQSINDICCFFHCSRPSLNL 61
Query: 211 IA-AEKG--VVVGRLIFSDNGDMIDCTKMGM--GGKAIPPNIDRVGDMQSDAMFILLVEK 265
A +G +V G+L + + G +I+C+K G +P +I++V + S A +ILLVEK
Sbjct: 62 ATYAMRGSSLVTGQLSYYEEGRLINCSKRSSTSNGLPVPVHINKVSHLSSSAEYILLVEK 121
Query: 266 DAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKIL 325
+ + RLA D+F + CI++T KG PDVATR FLR++ +L LPV L+D DPYGL IL
Sbjct: 122 ETVFQRLANDKFCAKNCCILLTGKGYPDVATRSFLRRLVDQLHLPVYGLMDGDPYGLDIL 181
Query: 326 SVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEED 385
S+Y GS M+YD+ L P I WLGI SDL + + E C LPM+++D K +L +
Sbjct: 182 SIYRFGSLTMAYDAKVLAVPSILWLGIFLSDLGHFGLTENCLLPMSKRDEKKADAILNKS 241
Query: 386 FVKK-NPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
++++ P W +L + K E++A+S+ F L++ Y+P K++ + ++
Sbjct: 242 YIQQLAPAWWSKLAEFRTRRVKLEVEAISTVSFTSLADHYIPSKIRGQCYI 292
>gi|10172604|dbj|BAB01408.1| DNA topoisomerase VI, subunit A [Arabidopsis thaliana]
Length = 357
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/331 (37%), Positives = 183/331 (55%), Gaps = 11/331 (3%)
Query: 107 GNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCL 166
G S ++ N PE D + DK + + T++K T +I + QL
Sbjct: 29 AEGRSPKISINQFRNYCMNPEADCLCSSDKPKGQ---EIFTLKKEPQTYRI---VQQLLQ 82
Query: 167 RNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAA----EKGVVVGRL 222
N H +KRD++Y F+ Q+ D + D+ + C+R +LNVI +V+G L
Sbjct: 83 ENRHASKRDIYYMHPSAFKAQSIVDRAIGDICILFQCSRYNLNVIHLIILLCCRLVMGWL 142
Query: 223 IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFP 282
F + G DC +P ++ V D+ S A +IL+VEK+ + RLA D F
Sbjct: 143 KFREAGRKFDCLNSLNTAYPVPVLVEEVEDIVSLAEYILVVEKETVFQRLANDMFCKTNR 202
Query: 283 CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANL 342
CI++T +G PDV+TR FLR + +L LPV LVD DPYG +IL+ Y GS M+YD +L
Sbjct: 203 CIVITGRGYPDVSTRRFLRLLMEKLHLPVHCLVDCDPYGFEILATYRFGSMQMAYDIESL 262
Query: 343 TTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKN-PGWVEELNLMV 401
PD+KWLG PSD + Y +P+QC LP+TE+D K + +L ++K+ P W EL M+
Sbjct: 263 RAPDMKWLGAFPSDSEVYSVPKQCLLPLTEEDKKRTEAMLLRCYLKREMPQWRLELETML 322
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQK 432
K K EI+ALS +LSEVY+P K++++
Sbjct: 323 KRGVKFEIEALSVHSLSFLSEVYIPSKIRRE 353
>gi|352681956|ref|YP_004892480.1| type II DNA topoisomerase VI subunit A [Thermoproteus tenax Kra 1]
gi|350274755|emb|CCC81401.1| type II DNA topoisomerase VI, subunit A [Thermoproteus tenax Kra 1]
Length = 366
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/354 (34%), Positives = 201/354 (56%), Gaps = 16/354 (4%)
Query: 84 LSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFA 143
+S V +E IA++I+ ++PSR SN ++ + + L + R F
Sbjct: 1 MSRKEVLERLERWAGGIAKTIVELKEPVLEIPSRTLSNTIWDEKNKILRLGPEKLKRRFL 60
Query: 144 SLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVK--LFQD-------------QT 188
+ R+ T+ +L LI + +++ T RDL+Y +++D Q
Sbjct: 61 DVKESRRFMQTMLMLKLIVEAIRADVYPTIRDLYYNGKHTIIYKDFLGREHKENTWDEQA 120
Query: 189 QSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNID 248
+S+ V++D+ R + V A KG VVG ++ G +D +K G ++P N+D
Sbjct: 121 ESNGVIEDIEVAANILREEMGVSADVKGKVVGPIVVRSQGYELDASKFGETALSLPVNVD 180
Query: 249 RVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELK 308
+ ++ +A ++L++EKDA + RL ++F+++ I++TAKG PD ATR F+R++ E K
Sbjct: 181 ALEIVKVEASYVLVIEKDAIFQRLVREKFWSQENAILITAKGMPDRATRRFVRRLNEEYK 240
Query: 309 LPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRL 368
LPV L D DPYG+ I SVY GS +SY+S L TP K+LG+ P D+++YKIP+Q +
Sbjct: 241 LPVYVLTDGDPYGIYIYSVYKSGSIKLSYESERLATPRAKFLGVAPLDIERYKIPDQFVI 300
Query: 369 PMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSE 422
TE+DIK ++LL+ + +N W +EL+ +KTK+K EI+ALS+ G +YL +
Sbjct: 301 RATERDIKRAQELLKYPWF-QNEIWKKELDYFLKTKKKVEIEALSAHGLKYLHD 353
>gi|145592124|ref|YP_001154126.1| DNA topoisomerase VI subunit A [Pyrobaculum arsenaticum DSM 13514]
gi|379003158|ref|YP_005258830.1| DNA topoisomerase VI, subunit A [Pyrobaculum oguniense TE7]
gi|145283892|gb|ABP51474.1| Spo11/DNA topoisomerase VI, subunit A [Pyrobaculum arsenaticum DSM
13514]
gi|375158611|gb|AFA38223.1| DNA topoisomerase VI, subunit A [Pyrobaculum oguniense TE7]
Length = 367
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/366 (33%), Positives = 205/366 (56%), Gaps = 17/366 (4%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
S S +E + +++L ++P+R SN ++ + + L + R F
Sbjct: 3 SRSEFLERLEKWGYNLTKAVLELEEPVMEIPARTLSNTIWDEKAKMLKLGPEKMHRRFLD 62
Query: 145 LSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVK--LFQD-------------QTQ 189
+ R+ TV +L LI + +++ T RDL+Y +F+D Q +
Sbjct: 63 MKEARRFMQTVLMLRLIVEAIREDVYPTIRDLYYNGKHTIVFKDPLGRAHRENTWDEQDE 122
Query: 190 SDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDR 249
S+AV++D+ R + V A KG +VG ++ G +D +K G ++P N+D
Sbjct: 123 SNAVIEDIEVATNVLREEMGVSADVKGKIVGPIVVRSQGYELDASKFGETALSLPVNVDA 182
Query: 250 VGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKL 309
+ ++ +A ++L+VEKDA + RL ++F+++ I+VTAKG PD ATR F+R++ E KL
Sbjct: 183 LEIVKVEAAYVLVVEKDAIFQRLVREKFWSQENAILVTAKGMPDRATRRFIRRLNEEYKL 242
Query: 310 PVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLP 369
PV L D DPYG I SVY GS +SY+S L TP+ K+LG+ +D+D YKI + +
Sbjct: 243 PVYVLTDGDPYGWYIYSVYKSGSIKLSYESERLATPEAKFLGLTATDIDAYKISDNYVIA 302
Query: 370 MTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
T++D+K ++LL + +K+ W +E+NL +K K+K EI+ALS+ G ++L + YL K+
Sbjct: 303 ATDRDVKRAQELLRYPWFQKSE-WTKEINLFLKKKKKVEIEALSTHGLKFLHD-YLRDKI 360
Query: 430 QQKDWL 435
+ K ++
Sbjct: 361 RNKKFI 366
>gi|330834337|ref|YP_004409065.1| DNA topoisomerase VI subunit A [Metallosphaera cuprina Ar-4]
gi|329566476|gb|AEB94581.1| DNA topoisomerase VI subunit A [Metallosphaera cuprina Ar-4]
Length = 386
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/386 (32%), Positives = 209/386 (54%), Gaps = 29/386 (7%)
Query: 74 LSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVL 133
+S RE + ++ +L+ Q+ R G ++P R SN +Y + ++L
Sbjct: 5 VSKVDREARGRAAETLKKRFLSLVDQLER----GEPLVMEIPKRTLSNTVYDEKRKLLLL 60
Query: 134 KDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFY--------------- 178
+ R F ++ R+ TV + S+I+ + + + T RDL+Y
Sbjct: 61 GEDKMKRSFLDMNEARRFMQTVLMGSIIYDALVNDEYPTIRDLYYRGKHSIVIRDPKGKT 120
Query: 179 TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGM 238
+ + +Q +SD+V+ D+ R + +++ EKG VVG + D+ID +KMG
Sbjct: 121 HEENTWDEQKESDSVIIDIEVFTSLLREEMLILSKEKGKVVGDMRLRSGNDVIDLSKMGH 180
Query: 239 GGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRL 298
G +I P D + ++ +A F+L+VEKDA + +L F+ ++ C+++T+ GQPD ATR
Sbjct: 181 GAYSIEPTPDLIDFVEVNADFVLVVEKDAVFQQLHRAGFWRKYKCVLITSAGQPDRATRR 240
Query: 299 FLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL- 357
FLR++ ELKLPV L D+DPYG I SV+ GS ++SY+S L TPD K+LG+ D+
Sbjct: 241 FLRRLNEELKLPVYILTDADPYGWYIYSVFRIGSISLSYESERLATPDAKFLGVSMGDIF 300
Query: 358 ----DKYKIPEQCR----LPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEI 409
K + E+ R + E DIK ++ D+ K GW EE+N+ ++ K K EI
Sbjct: 301 GTPRKKPYLSERERSSFIIKAKETDIKRALEIKNYDWF-KTKGWEEEINIFLQRKSKLEI 359
Query: 410 QALSSFGFQYLSEVYLPLKLQQKDWL 435
+A++S G ++L+ Y+P K+Q KD++
Sbjct: 360 EAMASKGLKFLAFQYIPEKIQTKDFI 385
>gi|374325958|ref|YP_005084158.1| DNA topoisomerase [Pyrobaculum sp. 1860]
gi|356641227|gb|AET31906.1| DNA topoisomerase (ATP-hydrolyzing) [Pyrobaculum sp. 1860]
Length = 367
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 194/338 (57%), Gaps = 17/338 (5%)
Query: 113 QVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVT 172
++P+R SN ++ + + L + R F + R+ TV +L LI + +++ T
Sbjct: 31 EIPARTLSNTIWDEKARMLRLGPEKLQRRFLDMKEARRFMQTVLMLRLIVEAIREDVYPT 90
Query: 173 KRDLFYTDVK--LFQD-------------QTQSDAVLDDVACILGCTRSSLNVIAAEKGV 217
RDL+Y +F+D Q +S+AV++D+ R + V A KG
Sbjct: 91 IRDLYYNGKHTIVFKDPLGRTHRENTWDEQAESNAVIEDIEVAANVLREEMGVSADVKGK 150
Query: 218 VVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRF 277
+VG ++ G +D +K G ++P N+D + ++ +A ++L+VEKDA + RL ++F
Sbjct: 151 IVGPIVVRSQGYELDASKFGETALSLPVNVDALEIVKVEATYVLVVEKDAIFQRLVREKF 210
Query: 278 YNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSY 337
+++ I+VTAKG PD ATR F+R++ E KLPV L D DPYG I SVY GS +SY
Sbjct: 211 WSQENAILVTAKGMPDRATRRFIRRLNEEYKLPVYVLTDGDPYGWYIYSVYKSGSIKLSY 270
Query: 338 DSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEEL 397
+S L TPD K+LG+ +D+D YKI + + ++DIK ++LL + +K P W E+
Sbjct: 271 ESERLATPDAKFLGLTATDIDAYKISDNYVIAANDRDIKRAQELLRYPWFQK-PEWTREV 329
Query: 398 NLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
NL ++ K+K EI+ALS+ G ++L + YL K++ + ++
Sbjct: 330 NLFLRKKKKVEIEALSTHGLKFLHD-YLRDKIRGRKFI 366
>gi|307596127|ref|YP_003902444.1| DNA topoisomerase [Vulcanisaeta distributa DSM 14429]
gi|307551328|gb|ADN51393.1| DNA topoisomerase (ATP-hydrolyzing) [Vulcanisaeta distributa DSM
14429]
Length = 369
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 198/347 (57%), Gaps = 18/347 (5%)
Query: 100 IARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILS 159
+ +IL ++PSR SN ++ P+ +VL + R F L ++ T+ +L
Sbjct: 19 VTNTILNNEEPILEIPSRTLSNTIWDPKKKMLVLGPEKLRRRFLDLKESKRFMQTMLMLR 78
Query: 160 LIHQLCLRNIHVTKRDLFYT---------DV-------KLFQDQTQSDAVLDDVACILGC 203
LI Q ++ T RDL+Y D+ + +Q++S+AV++D+ G
Sbjct: 79 LIVQAIREGVYPTIRDLYYNGKHTMEFKADIINKVIRENTWDEQSESNAVIEDIEVATGI 138
Query: 204 TRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLV 263
R + + A KG VVG +I G ID TK+G ++PPN D + ++ +A ++L++
Sbjct: 139 LREEMGLSADVKGKVVGPIIVRSKGFEIDATKLGDTALSLPPNPDDLDIVKVEANYVLVI 198
Query: 264 EKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLK 323
EKDA + RL + F+N+ C+++TAKG PD ATR F+R++ E LPV L D DPYG
Sbjct: 199 EKDAIFQRLNREGFWNKESCLLITAKGMPDRATRRFVRRLNEEYGLPVYVLTDGDPYGWY 258
Query: 324 ILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLE 383
I SVY GS +SY+S L TP+ K++G+ +D+ YKI ++ + T++D+K ++LL
Sbjct: 259 IYSVYKSGSIKLSYESDRLATPEAKFVGVTATDIRTYKISDEYVIKATDRDLKRAQELLR 318
Query: 384 EDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
+ + + W +E+ L ++TK+K EI+ALS+ G ++L + YL K+
Sbjct: 319 YPWFQSD-HWKKEIELFLRTKKKVEIEALSTHGLRFLHD-YLIDKIH 363
>gi|297722559|ref|NP_001173643.1| Os03g0752200 [Oryza sativa Japonica Group]
gi|31712057|gb|AAP68363.1| putative topoisomerase 6 [Oryza sativa Japonica Group]
gi|40539002|gb|AAR87259.1| putative DNA topoisomerase (with alternative splicing) [Oryza
sativa Japonica Group]
gi|53127614|emb|CAD71263.1| putative topoisomerase VI subunit A [Oryza sativa Indica Group]
gi|108711121|gb|ABF98916.1| Phytochrome C, putative, expressed [Oryza sativa Japonica Group]
gi|150371041|dbj|BAF65344.1| topoisomerase Spo11 [Oryza sativa Japonica Group]
gi|218193764|gb|EEC76191.1| hypothetical protein OsI_13532 [Oryza sativa Indica Group]
gi|222625809|gb|EEE59941.1| hypothetical protein OsJ_12593 [Oryza sativa Japonica Group]
gi|255674904|dbj|BAH92371.1| Os03g0752200 [Oryza sativa Japonica Group]
gi|269859219|gb|ACZ52153.1| topoisomerase 6 subunit A-like protein [Oryza sativa Japonica
Group]
Length = 381
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 161/263 (61%), Gaps = 1/263 (0%)
Query: 170 HVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGD 229
H +KRD++Y +FQ+Q D ++D+ + C+R +LNV+ KG+V+G + F +
Sbjct: 115 HCSKRDIYYMYPSIFQEQAVVDRAINDICVLFKCSRHNLNVVPVAKGLVMGWIRFLEGEK 174
Query: 230 MIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAK 289
+ C +IP +I+ + D+ S A +IL+VEK+ + RLA D+F R CI++T +
Sbjct: 175 EVYCVTNVNAAFSIPVSIEAIKDVVSVADYILIVEKETVFQRLANDKFCERNRCIVITGR 234
Query: 290 GQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKW 349
G PD+ TR FLR + +L LPV LVD+DPYG IL+ Y GS ++YD+ L PDI+W
Sbjct: 235 GYPDIPTRRFLRYLVEQLHLPVYCLVDADPYGFDILATYKFGSLQLAYDANFLRVPDIRW 294
Query: 350 LGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKN-PGWVEELNLMVKTKQKAE 408
LG+ SD + Y++P+ C L ++ +D + + +L ++ + P W EL M++ K E
Sbjct: 295 LGVFTSDFEDYRLPDCCLLHLSSEDRRKAEGILSRCYLHREAPQWRLELEAMLQKGVKFE 354
Query: 409 IQALSSFGFQYLSEVYLPLKLQQ 431
I+ALS+ +LSE Y+P K++Q
Sbjct: 355 IEALSACSISFLSEEYIPKKIKQ 377
>gi|357115345|ref|XP_003559449.1| PREDICTED: meiotic recombination protein SPO11-1-like [Brachypodium
distachyon]
Length = 383
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 169/280 (60%), Gaps = 1/280 (0%)
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
++ +++L ++ QL +N H +KRD++Y +F +Q D ++D+ + C+R +LNV+
Sbjct: 99 SVLLRVLFVVQQLLQQNKHCSKRDIYYMYPSIFIEQAVVDRAINDICILFKCSRHNLNVV 158
Query: 212 AAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIR 271
KG+V+G + F + + C +IP +I+ + D+ S A +IL+VEK+ + R
Sbjct: 159 PVAKGLVMGWIRFVEGEKKVYCITNVNAAFSIPVSIETIKDIVSVAHYILVVEKETVFQR 218
Query: 272 LAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCG 331
LA D+F R CI++T +G PDV TR FLR + +L LP LVDSDPYG IL+ Y G
Sbjct: 219 LANDKFCERNRCIVITGRGYPDVPTRRFLRHLVEQLHLPAYCLVDSDPYGFDILATYKFG 278
Query: 332 SKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKN- 390
S ++YD+ L P I+WLG+ SD ++Y +P+ C L ++ +D K + +L ++ +
Sbjct: 279 SMQLAYDANLLRVPGIRWLGVFTSDFEEYCLPDYCLLDLSSEDRKKLEGILTRCYLHREA 338
Query: 391 PGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
P W EL M++ K EI+ALS+ +LS+ Y+P K++
Sbjct: 339 PEWRAELEAMLEKGVKFEIEALSASSISFLSQEYIPQKIK 378
>gi|171185844|ref|YP_001794763.1| DNA topoisomerase VI subunit A [Pyrobaculum neutrophilum V24Sta]
gi|170935056|gb|ACB40317.1| DNA topoisomerase (ATP-hydrolyzing) [Pyrobaculum neutrophilum
V24Sta]
Length = 367
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 120/366 (32%), Positives = 203/366 (55%), Gaps = 17/366 (4%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
S S +E +A++IL ++P+R SN ++ + + L + R F
Sbjct: 3 SRSEFLKRLENWGADLAKAILELKEPVMEIPARTLSNTIWDEKAKMLKLGPEKMHRRFLD 62
Query: 145 LSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKL---------------FQDQTQ 189
+ R+ TV +L LI + +++ T RDL+Y + +Q +
Sbjct: 63 VKESRRFMQTVLMLRLIVEAIREDVYPTIRDLYYNGKHTITFKDPLGRTHRENTWDEQAE 122
Query: 190 SDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDR 249
S+AV++D+ R + V A KG +VG ++ G +D +K G ++P N+D
Sbjct: 123 SNAVIEDIEVAANVLREEMGVSADVKGKIVGPIVVRSQGYELDASKFGETALSLPVNVDG 182
Query: 250 VGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKL 309
+ ++ +A ++L+VEKDA + RL ++F+++ ++VTAKG PD ATR F+R++ E KL
Sbjct: 183 LEIVKVEASYVLVVEKDAIFQRLVREKFWSQESAVLVTAKGMPDRATRRFIRRLNEEYKL 242
Query: 310 PVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLP 369
PV L D DPYG I SVY GS +SY+S L TPD K+LG+ +D+D YKI + +
Sbjct: 243 PVYVLTDGDPYGWYIYSVYKSGSIKLSYESERLATPDAKFLGLTATDIDAYKISDNYVIA 302
Query: 370 MTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
++DIK ++LL + +K+ W +E+NL +K K+K EI+ALS+ G ++L + YL K+
Sbjct: 303 ANDRDIKRAQELLRYPWFQKSE-WTKEINLFLKKKKKVEIEALSTHGLKFLHD-YLRDKI 360
Query: 430 QQKDWL 435
+ + ++
Sbjct: 361 RGRKFI 366
>gi|302808592|ref|XP_002985990.1| hypothetical protein SELMODRAFT_123469 [Selaginella moellendorffii]
gi|300146138|gb|EFJ12809.1| hypothetical protein SELMODRAFT_123469 [Selaginella moellendorffii]
Length = 278
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 110/282 (39%), Positives = 170/282 (60%), Gaps = 7/282 (2%)
Query: 155 VKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAE 214
+++L ++ L + H +KRDL+YTD DQ + L D++ L CTRSSL+V++
Sbjct: 2 LRVLQIVQSLLQQGKHASKRDLYYTD----PDQATVNQALIDISVRLKCTRSSLHVVSVG 57
Query: 215 KGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAE 274
KG+++G L F D IDC+ + +D D+ S A +I++VEK+ + RLA
Sbjct: 58 KGLIMGSLRFKDADRTIDCSVCNPFFNIL--FLDHHKDISSCAEYIIVVEKETVFQRLAN 115
Query: 275 DRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKN 334
D F + CI++T +G PDVATR FLR + E KLPV LVD+DPYGL IL+ Y GS
Sbjct: 116 DGFCRKNNCIVLTGRGYPDVATRSFLRLLAAETKLPVYGLVDADPYGLDILATYRFGSPT 175
Query: 335 MSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNP-GW 393
M+YD+ L TP I+WLG+ SD + +P++C L +T D + + +L D++K W
Sbjct: 176 MAYDAEALATPSIRWLGVFLSDCQTHNVPDRCLLSLTNDDRRKAEAMLNRDYLKHLAFSW 235
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
++L LM++ K E++ALS+ F L++ Y+P K++ +L
Sbjct: 236 NQQLRLMLEKGVKLELEALSASKFSALADDYIPHKIKAAAYL 277
>gi|327310402|ref|YP_004337299.1| DNA topoisomerase [Thermoproteus uzoniensis 768-20]
gi|326946881|gb|AEA11987.1| DNA topoisomerase (ATP-hydrolyzing) [Thermoproteus uzoniensis
768-20]
Length = 357
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/339 (33%), Positives = 195/339 (57%), Gaps = 16/339 (4%)
Query: 99 QIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKIL 158
++A+S L+ ++P+R SN ++ + + L + R F + R+ TV +L
Sbjct: 7 ELAKSALSLKEPVMEIPARTLSNTIWDEKARMLRLGPEKIHRRFLDVKESRRFMQTVLML 66
Query: 159 SLIHQLCLRNIHVTKRDLFYTDVK--LFQD-------------QTQSDAVLDDVACILGC 203
LI +++ T RDL+Y +F+D Q +S+ V++D+
Sbjct: 67 RLIVDAIRADVYPTIRDLYYNGKHTIVFKDPLGRVHRENTWDEQAESNGVIEDIEVATNI 126
Query: 204 TRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLV 263
R + + A KG VVG ++ G +D +K G ++P N+D + ++ +A ++L++
Sbjct: 127 LREEMGISADVKGKVVGPIVVRSQGYELDASKFGETALSLPVNVDALEIVKVEASYVLVI 186
Query: 264 EKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLK 323
EKDA + RL ++F+++ +++TAKG PD ATR F++++ E +LPV L D DPYG+
Sbjct: 187 EKDAIFQRLVREKFWSQENAVLITAKGMPDRATRRFVKRLNEEYRLPVYVLTDGDPYGIY 246
Query: 324 ILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLE 383
I SVY GS +SY+S L TP K+LG+ P D+++YKIP+Q + T++DIK ++LL+
Sbjct: 247 IYSVYKSGSIKLSYESERLATPKAKFLGVAPLDIERYKIPDQFVIRATDRDIKRAQELLK 306
Query: 384 EDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSE 422
+ +N W +EL +KTK+K EI+ALS+ G +YL +
Sbjct: 307 YPWF-QNDVWKKELEYFLKTKKKVEIEALSAHGLKYLHD 344
>gi|156937842|ref|YP_001435638.1| DNA topoisomerase VI subunit A [Ignicoccus hospitalis KIN4/I]
gi|156566826|gb|ABU82231.1| DNA topoisomerase (ATP-hydrolyzing) [Ignicoccus hospitalis KIN4/I]
Length = 380
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 123/352 (34%), Positives = 203/352 (57%), Gaps = 20/352 (5%)
Query: 104 ILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQ 163
I G + ++ SR +N +Y + ++ ++T LR F +K T T+ + SLI++
Sbjct: 28 IRKGEEPALEILSRTKANVVYDSDKKMLMPGERTILRKFLDKGEAKKFTNTLLMASLIYE 87
Query: 164 LCLRNIHVTKRDLFYT---------------DVKLFQDQTQSDAVLDDVACILGCTRSSL 208
L + + T RDL+Y + + +Q +SDA++ DV G R +
Sbjct: 88 ALLNDEYPTIRDLYYRGKHTIIYRDLRGRKREENTWDEQKESDALIVDVEVYTGMLREEM 147
Query: 209 NVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAA 268
+++ EKG VVG + D+ID +KMG G AI P D + + +A ++L++EKDA
Sbjct: 148 LILSKEKGKVVGDMRIRSGDDVIDLSKMGHGAYAIEPTPDLIDFIDVNAEYVLVIEKDAV 207
Query: 269 YIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVY 328
+ +L +F+ R CI+++ GQPD ATR F+R++ EL LPV L D+DPYG I SV
Sbjct: 208 FQQLHRIKFWQRNNCILISTSGQPDRATRRFIRRLNEELGLPVYVLTDADPYGWYIFSVI 267
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDL--DKYKIPEQCR---LPMTEQDIKTGKDLLE 383
GS N+S++S L TP+ K+LG+ SD+ + P++ + + ++DIK ++++
Sbjct: 268 RSGSINLSFESERLATPNAKFLGVSMSDVFEKNWLSPKERKNVIIVAKDRDIKRAYEMMK 327
Query: 384 EDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
++ K +P W+ EL L +K K+K EI+AL+ G ++L+EVYLP K+Q KDW+
Sbjct: 328 YEWFKNSPKWMHELKLFLKEKKKLEIEALAVKGLKFLAEVYLPQKIQTKDWI 379
>gi|302808746|ref|XP_002986067.1| hypothetical protein SELMODRAFT_123390 [Selaginella moellendorffii]
gi|300146215|gb|EFJ12886.1| hypothetical protein SELMODRAFT_123390 [Selaginella moellendorffii]
Length = 278
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 109/282 (38%), Positives = 169/282 (59%), Gaps = 7/282 (2%)
Query: 155 VKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAE 214
+++L ++ L + H +KRDL+YTD DQ + L D++ L CTRSSL+V++
Sbjct: 2 LRVLQIVQSLLQQGKHASKRDLYYTD----PDQATVNQALIDISVRLKCTRSSLHVVSVG 57
Query: 215 KGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAE 274
KG+++G L F D IDC+ + +D D+ S A +I++VEK+ + RLA
Sbjct: 58 KGLIMGSLRFKDADRTIDCSVCNPFFNIL--FLDHHKDISSCAEYIIVVEKETVFQRLAN 115
Query: 275 DRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKN 334
D F + CI++T +G PDVATR FLR + E LPV LVD+DPYGL IL+ Y GS
Sbjct: 116 DGFCRKNNCIVLTGRGYPDVATRSFLRLLAAETNLPVYGLVDADPYGLDILATYRFGSPT 175
Query: 335 MSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNP-GW 393
M+YD+ L TP I+WLG+ SD + +P++C L +T D + + +L D++K W
Sbjct: 176 MAYDAEALATPSIRWLGVFLSDCQTHNVPDRCLLSLTNDDRRKAEAMLNRDYLKHLAFSW 235
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
++L LM++ K E++ALS+ F L++ Y+P K++ +L
Sbjct: 236 NQQLRLMLEKGVKLELEALSASKFSALADDYIPHKIKAAAYL 277
>gi|395752486|ref|XP_002830510.2| PREDICTED: meiotic recombination protein SPO11 [Pongo abelii]
Length = 384
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/358 (32%), Positives = 200/358 (55%), Gaps = 23/358 (6%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
S S V ++IE +I I S+ +F + +R+S + + + + T R S
Sbjct: 43 SSSEVLASIENIIQDIITSLARNEAPAFTIDNRSSWENIKFEDSVGLQMVSHCTTRKIKS 102
Query: 145 LS--TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILG 202
S + +K + +KILS+I++L N + TKRD++YTD +LF +QT D +++D++C+L
Sbjct: 103 DSPKSAQKFALILKILSMIYKLVQSNTYATKRDIYYTDSQLFGNQTVVDNIINDISCMLK 162
Query: 203 CTRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFIL 261
+R SL++++ KG++ G L + ++G ++CT G A+P NI + ++ +DA F+L
Sbjct: 163 VSRRSLHILSTSKGLIAGNLRYIEEDGTKVNCT-CGATAVAVPSNIQGIRNLVTDAKFVL 221
Query: 262 LVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVD----S 317
+VEKDA + RL D + PCI++T + + PV D S
Sbjct: 222 IVEKDATFPRLLYDTLHKLSPCIMIT---------------LSVPATCPVAINADTAMRS 266
Query: 318 DPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKT 377
++I+ +Y GS +MS+++ +LT P I+WLG+ PSDL + +P+ +P+T++D
Sbjct: 267 TRQSIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMK 326
Query: 378 GKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+L +V P W +E+ +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 327 LDSILRRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 384
>gi|325967951|ref|YP_004244143.1| DNA topoisomerase [Vulcanisaeta moutnovskia 768-28]
gi|323707154|gb|ADY00641.1| DNA topoisomerase (ATP-hydrolyzing) [Vulcanisaeta moutnovskia
768-28]
Length = 369
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 197/347 (56%), Gaps = 18/347 (5%)
Query: 100 IARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILS 159
+ IL+ ++PSR SN ++ + +VL + R F L ++ T+ +L
Sbjct: 19 VTNKILSNEEPVLEIPSRTLSNTIWDSKKKMLVLGPEKLKRRFLDLKESKRFMQTMLMLR 78
Query: 160 LIHQLCLRNIHVTKRDLFYT---------DV-------KLFQDQTQSDAVLDDVACILGC 203
LI Q ++ T RDL+Y D+ + +Q++S+AV++D+ G
Sbjct: 79 LIVQAIREGVYPTIRDLYYNGKHTMEFKADIINKVIRENTWDEQSESNAVIEDIEVATGM 138
Query: 204 TRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLV 263
R + + A KG VVG +I G ID TK+G ++PPN D + ++ +A ++L++
Sbjct: 139 LREEMGLSADVKGKVVGPIIVRSKGFEIDATKLGDTALSLPPNPDDLDIVKVEANYVLVI 198
Query: 264 EKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLK 323
EKDA + RL + F+N+ C+++TAKG PD ATR F+R++ E LP+ L D DPYG
Sbjct: 199 EKDAIFQRLNREGFWNKESCLLITAKGMPDRATRRFVRRLNEEYGLPIYILTDGDPYGWY 258
Query: 324 ILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLE 383
I SVY GS +SY+S L TP+ K++G+ +D+ YKI ++ + T++D+K ++L+
Sbjct: 259 IYSVYKSGSIKLSYESDRLATPEAKFVGVTATDIRTYKISDEYVIKATDRDLKRAQELIR 318
Query: 384 EDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
+ + + W +E+ L ++TK+K EI+ALS+ G ++L + YL K+
Sbjct: 319 YPWFQSD-HWKKEIELFLRTKKKVEIEALSTHGLRFLHD-YLTDKIH 363
>gi|146304518|ref|YP_001191834.1| DNA topoisomerase VI subunit A [Metallosphaera sedula DSM 5348]
gi|145702768|gb|ABP95910.1| DNA topoisomerase (ATP-hydrolyzing) [Metallosphaera sedula DSM
5348]
Length = 386
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/386 (31%), Positives = 208/386 (53%), Gaps = 29/386 (7%)
Query: 74 LSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVL 133
+S +E + ++ TL+ Q+ R G ++P R SN +Y + ++L
Sbjct: 5 VSKVDKEARSRAAETLKKNFLTLLDQLNR----GEPLVMEIPKRTLSNTVYDEKRKLLLL 60
Query: 134 KDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFY--------------- 178
++ R F ++ R+ TV + S+I+ + + + T RDL+Y
Sbjct: 61 GEEKMKRSFLDMNEARRFMQTVLMGSIIYDALVNDEYPTIRDLYYRGKHSIILRDPKGKT 120
Query: 179 TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGM 238
+ + +Q +SD+V+ D+ R + +++ EKG VVG + D+ID +KMG
Sbjct: 121 HEENTWDEQKESDSVIIDIEVFTSLLREEMLILSKEKGKVVGDMRLRSGNDIIDLSKMGH 180
Query: 239 GGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRL 298
G +I P D + ++ +A ++L+VEKDA + +L F+ ++ CI++T+ GQPD ATR
Sbjct: 181 GAYSIEPTPDLIDFVEVNADYVLVVEKDAVFQQLHRAGFWRKYKCILITSAGQPDRATRR 240
Query: 299 FLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL- 357
FLR++ ELKLPV L D+DPYG I SV+ GS ++SY+S L TPD K+LG+ D+
Sbjct: 241 FLRRLNEELKLPVYILTDADPYGWYIYSVFRIGSISLSYESERLATPDAKFLGVSMGDIF 300
Query: 358 ----DKYKIPEQCR----LPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEI 409
K + E+ R + E DIK ++ + K W EE+N+ ++ K K EI
Sbjct: 301 GTPKKKAYLSERERSSFIIKAKETDIKRALEIKNYSWF-KTKSWEEEINMFLQKKAKLEI 359
Query: 410 QALSSFGFQYLSEVYLPLKLQQKDWL 435
+A++S G ++L+ Y+P K+Q +D++
Sbjct: 360 EAMASKGLKFLAFQYIPEKIQTQDFI 385
>gi|413933051|gb|AFW67602.1| hypothetical protein ZEAMMB73_214766 [Zea mays]
Length = 426
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 167/281 (59%), Gaps = 1/281 (0%)
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ +++L ++ QL +N H +KRD++Y +F + D ++D+ + C+R +LNV+
Sbjct: 142 NVLLRVLFVVQQLLQQNKHCSKRDIYYMYPSIFVEVAVVDRAINDICILFKCSRHNLNVV 201
Query: 212 AAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIR 271
KG+V+G + F + + C +IP +I+ + D+ S A +IL+VEK+ + R
Sbjct: 202 PVVKGLVMGWIRFMEGEKKVYCITSVNAAFSIPVDIEAIKDVVSVAHYILVVEKETVFQR 261
Query: 272 LAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCG 331
LA D+F R CI++T +G PD+ TR FLR + L LP LVDSDPYG IL+ Y G
Sbjct: 262 LANDKFCERNRCIVITGRGYPDIPTRRFLRYLVELLHLPAYCLVDSDPYGFDILATYKFG 321
Query: 332 SKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKN- 390
S +++D+ L PDI+WLG+ SD ++Y +P+ C L ++ +D + + +L ++ +
Sbjct: 322 SLQLAHDANLLRVPDIRWLGVFTSDFEEYCLPDCCLLRLSPEDRRKAEGILARCYLHREA 381
Query: 391 PGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
P W EL M++ K EI+ALS+ +LS Y+P K++Q
Sbjct: 382 PEWRSELEAMLQKGVKFEIEALSANSISFLSHEYIPQKIKQ 422
>gi|424819557|ref|ZP_18244639.1| DNA topoisomerase VI subunit A [Candidatus Parvarchaeum acidophilus
ARMAN-5_'5-way FS']
gi|290559010|gb|EFD92390.1| DNA topoisomerase (ATP-hydrolyzing) [Candidatus Parvarchaeum
acidophilus ARMAN-5]
gi|326422588|gb|EGD71982.1| DNA topoisomerase VI subunit A [Candidatus Parvarchaeum acidophilus
ARMAN-5_'5-way FS']
Length = 367
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 187/354 (52%), Gaps = 9/354 (2%)
Query: 90 QSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVR 149
Q +E L I + I G +P R SN Y E I L D+ + R F ++ VR
Sbjct: 14 QEILENLGADIYKQIEKGGNPYVTLPVRGLSNVKYDEENRMITLGDEMSKRYFLNVGHVR 73
Query: 150 KSTITVKILSLIHQLCLRNIHVTKRDLFY--------TDVKLFQDQTQSDAVLDDVACIL 201
K T T+ + ++ +L H + R FY T + + DQT+++ ++D+ I
Sbjct: 74 KFTQTLAMAAVSRELIKSEKHTSLRSAFYQVRRTIPGTKIDIVDDQTETNKAIEDLELIT 133
Query: 202 GCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFIL 261
TR LN+ A + G V G ++ D GD+ID +KMG GG A+P N++ + + DA F++
Sbjct: 134 DLTREQLNINANKNGAVAGEVVVEDRGDIIDWSKMGSGGWAVPSNVEELIFKKVDAKFVI 193
Query: 262 LVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYG 321
+EK + RL ED+ + + C+I+ ++GQ R L+++ E LPV L D D +G
Sbjct: 194 YMEKATIWDRLNEDKAWKKLHCVIIASQGQATRGIRRLLQRLSREHNLPVYVLTDGDIWG 253
Query: 322 LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDL 381
+ I S GS +++ S L+ P+ K++G+ D+DKY + + + DI K +
Sbjct: 254 IYIYSAIKFGSIALAHVSDKLSLPEAKFMGLTMEDIDKYGLRRHL-IKFKDVDIARIKQI 312
Query: 382 LEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
D+ K N W+EELN M K K E+ A ++ G +++E YLP KL+ K++L
Sbjct: 313 KNYDWFKNNKKWMEELNTMEKLGAKVELDAFTAKGLSFMTETYLPEKLKDKNFL 366
>gi|413933054|gb|AFW67605.1| meiotic recombination protein SPO11 [Zea mays]
Length = 383
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 167/281 (59%), Gaps = 1/281 (0%)
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ +++L ++ QL +N H +KRD++Y +F + D ++D+ + C+R +LNV+
Sbjct: 99 NVLLRVLFVVQQLLQQNKHCSKRDIYYMYPSIFVEVAVVDRAINDICILFKCSRHNLNVV 158
Query: 212 AAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIR 271
KG+V+G + F + + C +IP +I+ + D+ S A +IL+VEK+ + R
Sbjct: 159 PVVKGLVMGWIRFMEGEKKVYCITSVNAAFSIPVDIEAIKDVVSVAHYILVVEKETVFQR 218
Query: 272 LAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCG 331
LA D+F R CI++T +G PD+ TR FLR + L LP LVDSDPYG IL+ Y G
Sbjct: 219 LANDKFCERNRCIVITGRGYPDIPTRRFLRYLVELLHLPAYCLVDSDPYGFDILATYKFG 278
Query: 332 SKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKN- 390
S +++D+ L PDI+WLG+ SD ++Y +P+ C L ++ +D + + +L ++ +
Sbjct: 279 SLQLAHDANLLRVPDIRWLGVFTSDFEEYCLPDCCLLRLSPEDRRKAEGILARCYLHREA 338
Query: 391 PGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
P W EL M++ K EI+ALS+ +LS Y+P K++Q
Sbjct: 339 PEWRSELEAMLQKGVKFEIEALSANSISFLSHEYIPQKIKQ 379
>gi|305662509|ref|YP_003858797.1| DNA topoisomerase [Ignisphaera aggregans DSM 17230]
gi|304377078|gb|ADM26917.1| DNA topoisomerase (ATP-hydrolyzing) [Ignisphaera aggregans DSM
17230]
Length = 392
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 193/363 (53%), Gaps = 27/363 (7%)
Query: 99 QIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKIL 158
+I +I+ G +P R SN +Y E ++L T R F + RK T+ +
Sbjct: 30 KIIEAIMKGEEPVLVIPKRTLSNTIYDRERGLLLLGSGTFERSFLDVKEARKFMQTILMA 89
Query: 159 SLIHQLCLRNIHVTKRDLFY---------------TDVKLFQDQTQSDAVLDDVACILGC 203
+I++ + N + T RDL+Y + + +Q +SDAVL D+ +
Sbjct: 90 RIIYEALVNNEYPTIRDLYYRGKHSIRYRDHRNNIVEENTWDEQKESDAVLRDIEVYVNL 149
Query: 204 TRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLV 263
R + +++ EKG VVG + D+ID +KMG G AI D + + +A F+L+V
Sbjct: 150 LREEMLILSKEKGKVVGDMRIKSGDDIIDLSKMGHGAYAIESTPDLIEFIDVNAEFVLVV 209
Query: 264 EKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLK 323
EKDA + +L F+ R+ I+VT+ GQPD ATR F+R++ ELKLPV L D+DPYG
Sbjct: 210 EKDAVFQQLHRAGFWKRYKAILVTSAGQPDRATRRFVRRLNEELKLPVYILTDADPYGWY 269
Query: 324 ILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL-------DKYKIPEQCR----LPMTE 372
I SV+ GS +SY+S L TP K+LG+ SD+ K + E R + +
Sbjct: 270 IYSVFRIGSITLSYESERLATPSAKFLGVSMSDIFGDKTTGKKPYLTESERKNFIIKAKK 329
Query: 373 QDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQK 432
DIK ++LL ++ K W E+N+ ++ + K EI+AL+ G +L + Y+P K++ K
Sbjct: 330 TDIKRAQELLNYEWF-KTEKWTREINMFLEKQSKLEIEALTGKGLYFLMDNYIPTKIETK 388
Query: 433 DWL 435
D++
Sbjct: 389 DFI 391
>gi|124027834|ref|YP_001013154.1| DNA topoisomerase VI subunit A [Hyperthermus butylicus DSM 5456]
gi|166229996|sp|A2BLE8.1|TOP6A_HYPBU RecName: Full=Type 2 DNA topoisomerase 6 subunit A; AltName:
Full=Type II DNA topoisomerase VI subunit A
gi|123978528|gb|ABM80809.1| Type II DNA topoisomerase VI subunit A [Hyperthermus butylicus DSM
5456]
Length = 387
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/361 (32%), Positives = 195/361 (54%), Gaps = 25/361 (6%)
Query: 99 QIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKIL 158
+I ++ G + +P R SN +Y + ++L + R F L +K T+ +
Sbjct: 27 EILEQVMRGENPTIMLPKRTLSNTIYDEKRKLLLLGPEKLKRSFFDLHESKKFMQTLLMA 86
Query: 159 SLIHQLCLRNIHVTKRDLFY---------------TDVKLFQDQTQSDAVLDDVACILGC 203
+I++ RN + T RDL+Y + + +Q +SDAV+ D+ G
Sbjct: 87 RIIYEALERNEYPTIRDLYYRGKHTIVYREPGGRRHEENTWDEQRESDAVIRDIEVFTGL 146
Query: 204 TRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLV 263
R + +++ EKG VVG + GD+ID +KMG G AI P D + + DA ++L+V
Sbjct: 147 LREEMLILSKEKGKVVGNMRIRSGGDIIDLSKMGHGAYAIEPTPDLIEFIDVDAEYVLVV 206
Query: 264 EKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLK 323
EKDA + +L F+ + I++T+ GQPD ATR F+R++ EL LPV L D+DPYG
Sbjct: 207 EKDAVFQQLHRIGFWKKHRAILITSAGQPDRATRRFVRRLNEELGLPVYILTDADPYGWY 266
Query: 324 ILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYK-----IPEQCR----LPMTEQD 374
I SV+ GS +SY+S L TP+ +++G+ +D+ YK + EQ R + E D
Sbjct: 267 IYSVFKIGSITLSYESERLATPNARFIGVSMTDIFGYKSKKPYLTEQERRNFIIKAKEAD 326
Query: 375 IKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDW 434
IK +L + + W E+++ ++ K K EI+A++S G ++L++ YLP K++ DW
Sbjct: 327 IKRAYELKNYKWF-QTKKWQIEIDIFLEKKAKLEIEAMTSKGLRFLADKYLPEKIETGDW 385
Query: 435 L 435
+
Sbjct: 386 I 386
>gi|320170822|gb|EFW47721.1| meiotic recombination protein SPO11 [Capsaspora owczarzaki ATCC
30864]
Length = 673
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 127/360 (35%), Positives = 195/360 (54%), Gaps = 20/360 (5%)
Query: 93 IETLILQIARSILAGNGFSFQVPSRASSNQL-YVPELD-RIVLKDKTTLRPFASLSTVRK 150
IE ++L +I+ F+ SR + + P++ R++L +K T ++ R+
Sbjct: 316 IEGIVLNTIAAIVEEEVPYFEFHSRVRQQGIVFDPQVGFRVLLHNKLT--KVDMFNSPRR 373
Query: 151 STITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNV 210
+ K+L I +L R ++ TKRDLFY DV LF Q D +DD+AC+L +R+ L+
Sbjct: 374 FAVMWKVLECIFELLRRKLNTTKRDLFYLDVPLFGSQKSVDCAIDDIACLLQVSRAQLHC 433
Query: 211 IAAEKGVVVGRLIFS----------DNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFI 260
IA+ KG++ G L S ++G+ + K +P +ID + MQ+ A F+
Sbjct: 434 IASFKGLICGNLEVSFEPLDELEDQEDGEQRAFLSTQLESKLLPRDIDDITVMQTTAEFV 493
Query: 261 LLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDP 319
L+VEK+A + RL DR ++ CI++T G PD+ TR F+ ++ LP+ ALVD DP
Sbjct: 494 LIVEKEAVFHRLLNDRVFDHIGDCIVITGIGYPDIQTRSFVHRLAEMCGLPMYALVDCDP 553
Query: 320 YGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGK 379
+G IL Y GS+ +++DS NLT P ++WLG+ PSD+DK+ I E L + D
Sbjct: 554 HGFDILCNYKYGSRALAFDSENLTVPSLRWLGLLPSDIDKFNIQEANWLAFNQYDTGKLT 613
Query: 380 DLLEEDFVKKNPG---WVEELNLMVKTKQKAEIQALSSFG-FQYLSEVYLPLKLQQKDWL 435
LL F+ P W EEL LM K E+QAL+ G +L+ +LP KLQ +L
Sbjct: 614 SLLNAPFLTL-PDLHLWREELELMQARGIKCELQALNVDGDLTFLTGRFLPHKLQSGHFL 672
>gi|195644000|gb|ACG41468.1| meiotic recombination protein SPO11 [Zea mays]
Length = 383
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 166/281 (59%), Gaps = 1/281 (0%)
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ +++L ++ L +N H +KRD++Y +F + D ++D+ + C+R +LNV+
Sbjct: 99 NVLLRVLFVVQHLLQQNKHCSKRDIYYMYPSIFVEVAVVDRAINDICILFKCSRHNLNVV 158
Query: 212 AAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIR 271
KG+V+G + F + + C +IP +I+ + D+ S A +IL+VEK+ + R
Sbjct: 159 PVVKGLVMGWIRFMEGEKKVYCITSVNAAFSIPVDIEAIKDVVSVAHYILVVEKETVFQR 218
Query: 272 LAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCG 331
LA D+F R CI++T +G PD+ TR FLR + L LP LVDSDPYG IL+ Y G
Sbjct: 219 LANDKFCERNRCIVITGRGYPDIPTRRFLRYLVELLHLPAYCLVDSDPYGFDILATYKFG 278
Query: 332 SKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKN- 390
S +++D+ L PDI+WLG+ SD ++Y +P+ C L ++ +D + + +L ++ +
Sbjct: 279 SLQLAHDANLLRVPDIRWLGVFTSDFEEYCLPDCCLLRLSPEDRRKAEGILARCYLHREA 338
Query: 391 PGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
P W EL M++ K EI+ALS+ +LS Y+P K++Q
Sbjct: 339 PEWRSELEAMLQKGVKFEIEALSANSISFLSHEYIPQKIKQ 379
>gi|374633765|ref|ZP_09706130.1| DNA topoisomerase VI, subunit A [Metallosphaera yellowstonensis
MK1]
gi|373523553|gb|EHP68473.1| DNA topoisomerase VI, subunit A [Metallosphaera yellowstonensis
MK1]
Length = 386
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/369 (31%), Positives = 199/369 (53%), Gaps = 25/369 (6%)
Query: 91 STIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRK 150
T++ L + + G ++P R SN +Y + ++L + R F ++ R+
Sbjct: 18 ETLKKRFLTLVDQLEKGEPMVMEIPKRTLSNTVYDEQRKLLLLGSEKMKRSFLDMNEARR 77
Query: 151 STITVKILSLIHQLCLRNIHVTKRDLFY---------------TDVKLFQDQTQSDAVLD 195
TV + S+I+ + + + T RDL+Y + + +Q +SD+V+
Sbjct: 78 FMQTVLMGSIIYDALINDEYPTIRDLYYRGKHSIVIRDPKGKTHEENTWDEQKESDSVII 137
Query: 196 DVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 255
D+ R + +++ EKG VVG + D+ID +KMG G +I P D + ++
Sbjct: 138 DIEVFTSLLREEMLILSKEKGKVVGDMRLRSGNDIIDLSKMGHGAYSIEPTPDLIDFVEV 197
Query: 256 DAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 315
+A ++L+VEKDA + +L F+ ++ I++T+ GQPD ATR FLR++ ELKLPV L
Sbjct: 198 NADYVLVVEKDAVFQQLHRAGFWRKYRAILITSAGQPDRATRRFLRRLNEELKLPVYILT 257
Query: 316 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL-----DKYKIPEQCR--- 367
D+DPYG I SV+ GS ++SY+S L TPD K+LG+ D+ K + E+ R
Sbjct: 258 DADPYGWYIYSVFRIGSISLSYESERLATPDAKFLGVSMGDIFGTPRKKPYLSERERSSF 317
Query: 368 -LPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLP 426
+ E DIK ++ ++ K W EE+N ++ K K EI+A++S G ++L+ Y+P
Sbjct: 318 IIKAKETDIKRALEIKNYEWF-KTKSWEEEINAFLQRKAKLEIEAMASKGLKFLAFQYIP 376
Query: 427 LKLQQKDWL 435
K+Q KD++
Sbjct: 377 EKIQTKDYI 385
>gi|242038091|ref|XP_002466440.1| hypothetical protein SORBIDRAFT_01g007840 [Sorghum bicolor]
gi|241920294|gb|EER93438.1| hypothetical protein SORBIDRAFT_01g007840 [Sorghum bicolor]
Length = 383
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 160/265 (60%), Gaps = 1/265 (0%)
Query: 168 NIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDN 227
N H +KRD++Y +F + D ++D+ +L C+R +LNV+ KG+V+G + F +
Sbjct: 115 NKHCSKRDIYYMYPSIFVEVAVVDRAINDICILLKCSRHNLNVVPVVKGLVMGWIRFVEG 174
Query: 228 GDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVT 287
+ C +IP +I+ + D+ S A +IL+VEK+ + RLA D+F R CI++T
Sbjct: 175 EKKVYCITNVNAAFSIPVDIEAIKDVVSVAHYILVVEKETVFQRLANDKFCERNRCIVIT 234
Query: 288 AKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDI 347
+G PD+ TR FLR + +L LP LVDSDPYG IL+ Y GS +++D+ L PDI
Sbjct: 235 GRGYPDIPTRRFLRYLVEQLHLPAYCLVDSDPYGFDILATYKFGSLQLAHDANLLRVPDI 294
Query: 348 KWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKN-PGWVEELNLMVKTKQK 406
+WLG+ SD ++Y +P+ C L ++ +D + + +L ++ + P W EL M++ K
Sbjct: 295 RWLGVFTSDFEEYCLPDCCLLHLSPEDRRKAERILARCYLHREVPEWRSELEAMLQKGVK 354
Query: 407 AEIQALSSFGFQYLSEVYLPLKLQQ 431
EI+ALS+ +LS+ Y+P K++Q
Sbjct: 355 FEIEALSANSISFLSDEYIPQKIKQ 379
>gi|429217560|ref|YP_007175550.1| DNA topoisomerase VI, subunit A [Caldisphaera lagunensis DSM 15908]
gi|429134089|gb|AFZ71101.1| DNA topoisomerase VI, subunit A [Caldisphaera lagunensis DSM 15908]
Length = 385
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 191/347 (55%), Gaps = 25/347 (7%)
Query: 113 QVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVT 172
++P R +N ++ P + L + R F +++ +K T+ + S+I+Q + N + T
Sbjct: 39 EIPMRTLANTVFDPNKGILKLGIRKIERNFLNMNESKKFMQTLLMASIIYQALVENEYPT 98
Query: 173 KRDLFY---------------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV 217
RDL+Y + +++Q++SDA + DV +LG R + +++ EKG
Sbjct: 99 IRDLYYRGKHTILYKDLNGKLKEENTWEEQSESDASIRDVEVMLGLLREDMLILSKEKGK 158
Query: 218 VVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRF 277
VVG + D+ID +K+G G AI D + + DA +L+VEKDA + +L F
Sbjct: 159 VVGNMRIRSGNDVIDLSKLGHGAYAIESTPDLIEFLDYDAEMVLVVEKDAVFQQLHRAGF 218
Query: 278 YNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSY 337
+ ++ ++VT GQPD ATR F+R++ ELKLPV L DSDPYG I SV+ GS +SY
Sbjct: 219 WQKYKALLVTGAGQPDRATRRFVRRLHDELKLPVYILTDSDPYGWYIYSVFKVGSIQLSY 278
Query: 338 DSANLTTPDIKWLGIRPSDLDKYK-----IPEQCR----LPMTEQDIKTGKDLLEEDFVK 388
+S L TP K+LG+ SD+ Y + E+ R + + DIK K+L+ +
Sbjct: 279 ESERLATPKAKFLGVSMSDIFGYGTKKAYLSEEERRNFIIKAKDVDIKRAKELMRYSWF- 337
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+ W E+++ + K K EI+A++S G ++L+ Y+P K+Q DW+
Sbjct: 338 HSKLWKREIDMFMDKKAKLEIEAMASKGLKFLAFQYIPEKIQTNDWI 384
>gi|321478172|gb|EFX89130.1| meiotic recombination protein Spo11 [Daphnia pulex]
Length = 295
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 177/290 (61%), Gaps = 7/290 (2%)
Query: 149 RKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSL 208
RK + +L+ H L N TKRD++Y DV L+ Q D+++ + +L R L
Sbjct: 10 RKCLLLFHLLAKSHALLRTNTTSTKRDIYYEDVSLWGSQPVLDSMVTQMTKLLNIPRCCL 69
Query: 209 NVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDA 267
N+ A KG+V G L F D +G +IDC G IP +++++ +S A +L+VEKD+
Sbjct: 70 NIGATSKGLVAGSLNFLDGDGKLIDCQTPT--GILIPNDVEKLSQFRSKAHLVLVVEKDS 127
Query: 268 AYIRLAEDRFYNRF--PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKIL 325
+ +L +D+ RF CI++T KG PDV TR FLR++ EL+LP LALVD+DP+G+ IL
Sbjct: 128 TFQKLIDDKI-ERFIGDCILITGKGYPDVNTRRFLRRLWDELQLPPLALVDADPHGISIL 186
Query: 326 SVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEED 385
+VY GS+N+ D +L+TP ++++G++PSD++ +IP++ +LP+T++D L
Sbjct: 187 AVYRFGSQNLE-DIEHLSTPQLRYIGLQPSDIEALQIPDEAKLPLTQRDRSLVDTLASRP 245
Query: 386 FVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
F+ +N +++ L+ + K EIQ L+ Q+LS YLP K+Q W+
Sbjct: 246 FITQNQLLRDQVKLLRRLDCKVEIQGLTKIHPQFLSRTYLPAKIQSMSWM 295
>gi|30696943|ref|NP_176582.2| meiotic recombination protein SPO11-2 [Arabidopsis thaliana]
gi|75335899|sp|Q9M4A1.1|SPO12_ARATH RecName: Full=Meiotic recombination protein SPO11-2;
Short=AtSPO11-2
gi|7270977|emb|CAB81545.1| putative topoisomerase VIA [Arabidopsis thaliana]
gi|91806019|gb|ABE65738.1| DNA topoisomerase VIA [Arabidopsis thaliana]
gi|332196057|gb|AEE34178.1| meiotic recombination protein SPO11-2 [Arabidopsis thaliana]
Length = 383
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 188/328 (57%), Gaps = 14/328 (4%)
Query: 116 SRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRD 175
S + N+ + ++ I L T + T + K++ + Q+ L+ VT+R+
Sbjct: 62 SNSCINKGILTDVSYIFLSTSFTKSSLTNAKTAKAFVRVWKVMEICFQILLQEKRVTQRE 121
Query: 176 LFYTDV----KLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNG-DM 230
LFY + F Q + + + DV +L C+R SL ++A+ +G+V GRL + G +
Sbjct: 122 LFYKLLCDSPDYFSSQIEVNRSVQDVVALLRCSRYSLGIMASSRGLVAGRLFLQEPGKEA 181
Query: 231 IDCTKMGMGGKAIPPNIDRVGD--MQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTA 288
+DC+ G G AI +++ + + M++DA +I++VEK A + RL EDR +N PC+ +TA
Sbjct: 182 VDCSACGSSGFAITGDLNLLDNTIMRTDARYIIIVEKHAIFHRLVEDRVFNHIPCVFITA 241
Query: 289 KGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDI 347
KG PD+ATR FL +M LP+L LVD +P GL IL + GS M ++ ++
Sbjct: 242 KGYPDIATRFFLHRMSTTFPDLPILVLVDWNPAGLAILCTFKFGSIGMGLEAYRYAC-NV 300
Query: 348 KWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKA 407
KW+G+R DL+ IPE+ +P+ +D + K LL +++N ++EEL+LMV+T ++A
Sbjct: 301 KWIGLRGDDLN--LIPEESLVPLKPKDSQIAKSLLSSKILQEN--YIEELSLMVQTGKRA 356
Query: 408 EIQALSSFGFQYLSEVYLPLKLQQKDWL 435
EI+AL G+ YL + Y+ K+ Q ++
Sbjct: 357 EIEALYCHGYNYLGK-YIATKIVQGKYI 383
>gi|302348021|ref|YP_003815659.1| type II DNA topoisomerase VI subunit A [Acidilobus saccharovorans
345-15]
gi|302328433|gb|ADL18628.1| Type II DNA topoisomerase VI subunit A [Acidilobus saccharovorans
345-15]
Length = 387
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/346 (34%), Positives = 186/346 (53%), Gaps = 25/346 (7%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
+P R +N ++ E + L R F ++ R+ T+ + + I++ + N + T
Sbjct: 42 IPKRTLANTVFDVEKGILKLGVSKLERKFLDMNESRRFMQTLVMAANIYRALIENEYPTI 101
Query: 174 RDLFYTDVK--LFQD-------------QTQSDAVLDDVACILGCTRSSLNVIAAEKGVV 218
RDL+Y +F D Q +SDA L D+ +LG R L +++ EKG V
Sbjct: 102 RDLYYRGKHTIVFHDLDGRHREENTWDEQAESDAALRDLEVMLGLLREDLMILSKEKGKV 161
Query: 219 VGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFY 278
VG + D+ID +K+G G AI D + + DA F+L+VEKDA + +L F+
Sbjct: 162 VGNMRIRSGNDIIDLSKLGHGAYAIESTPDLIEFLDVDAEFVLVVEKDAVFQQLHRVGFW 221
Query: 279 NRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYD 338
++ I+VT GQPD ATR F+R++ EL LPV L DSDPYG I SV+ GS +SY+
Sbjct: 222 QKYKSILVTGAGQPDRATRRFVRRLNEELGLPVYVLTDSDPYGWYIYSVFKVGSIQLSYE 281
Query: 339 SANLTTPDIKWLGIRPSDLDKYK-----IPEQCR----LPMTEQDIKTGKDLLEEDFVKK 389
S L TP K+LG+ SD+ Y + E+ R + + DI+ K+L+ + +
Sbjct: 282 SERLATPKAKFLGVSMSDIFGYGRKKPYLTEEERRNYIIKAKDLDIRRAKELMNYSWF-R 340
Query: 390 NPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
P W E+++ + K K EI+A++S G ++L+ YLP K+Q DW+
Sbjct: 341 TPLWKREIDMFLDKKAKLEIEAMASKGLKFLAFQYLPEKIQTHDWI 386
>gi|15897848|ref|NP_342453.1| DNA topoisomerase VI subunit A [Sulfolobus solfataricus P2]
gi|284175657|ref|ZP_06389626.1| DNA topoisomerase VI subunit A [Sulfolobus solfataricus 98/2]
gi|384434402|ref|YP_005643760.1| DNA topoisomerase [Sulfolobus solfataricus 98/2]
gi|13814151|gb|AAK41243.1| DNA topoisomerase VI subunit A (top6A) [Sulfolobus solfataricus P2]
gi|261602556|gb|ACX92159.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus solfataricus 98/2]
Length = 389
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 194/365 (53%), Gaps = 27/365 (7%)
Query: 97 ILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVK 156
L + + G ++P R SN +Y + ++L +K R F ++ ++ TV
Sbjct: 25 FLNLVEQLKKGEPLVMEIPMRTLSNAIYDEKRKLLLLGEKKLKRNFLDMNEAKRFMQTVL 84
Query: 157 ILSLIHQLCLRNIHVTKRDLFY-----------------TDVKLFQDQTQSDAVLDDVAC 199
+ S+I+ + + + T RDL+Y ++ + +Q +SD+V+ D+
Sbjct: 85 MASIIYDALVSDEYPTIRDLYYRGKHSLLLKSIDGNKIVSEENTWDEQKESDSVIVDIEV 144
Query: 200 ILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMF 259
R + +++ EKG VVG L D ID +K G G AI P D + + DA F
Sbjct: 145 FTSLLREEMLILSKEKGKVVGNLRIRSGNDTIDLSKTGHGAYAIEPTPDLIDFIDVDAEF 204
Query: 260 ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDP 319
+L+VEKDA + +L F+ ++ I++T+ GQPD ATR F+R++ ELKLPV L D+DP
Sbjct: 205 VLVVEKDAVFQQLHRAGFWKQYKSILITSAGQPDRATRRFVRRLNEELKLPVYILTDADP 264
Query: 320 YGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL-----DKYKIPEQCR----LPM 370
YG I SV+ GS ++SY+S L TPD K+LG+ SD+ K + E R +
Sbjct: 265 YGWYIFSVFRIGSISLSYESERLATPDAKFLGVSMSDIFGNSRKKPYLSEAERKNYIIKA 324
Query: 371 TEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
E DIK +++ ++ K W EE+N + K K EI+A++S G ++L+ Y+P K+
Sbjct: 325 KEADIKRAEEIKNYEWF-KTKAWEEEINTFLHRKAKLEIEAMASKGLKFLAFQYIPEKIT 383
Query: 431 QKDWL 435
KD++
Sbjct: 384 NKDYI 388
>gi|357481549|ref|XP_003611060.1| Meiotic recombination protein SPO11-2 [Medicago truncatula]
gi|355512395|gb|AES94018.1| Meiotic recombination protein SPO11-2 [Medicago truncatula]
Length = 390
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 122/373 (32%), Positives = 207/373 (55%), Gaps = 32/373 (8%)
Query: 87 SAVQSTIETLILQIARSILAGNGFSFQVP------SRASSNQLYVPELDRIVLKD----K 136
S V++ IE +L + + A N +P S + N + EL + L + +
Sbjct: 26 SQVRARIEVSVLSFLKILNASNPAISDLPLIQRKSSNSRVNHGLLTELSYVFLSNSVSTR 85
Query: 137 TTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFY----TDVKLFQDQTQSDA 192
+ +RP A+ + VR K++ + +Q+ L+ VT+R+LFY LF Q +
Sbjct: 86 SLMRPNAAKAFVR----VWKVMEMCYQILLQEKRVTQRELFYKLLCHSQHLFPSQKDVNR 141
Query: 193 VLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNG-DMIDCTKMGMGGKAIPPNIDRVG 251
+ D+ +L C+R SL ++A+ +G++ GRLI + G + +DC+ G G AI +++ +
Sbjct: 142 TIQDLVALLRCSRYSLGIMASSRGIIAGRLILQEPGKEAVDCSVCGSSGHAISGDLNLLD 201
Query: 252 DM--QSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-K 308
+ +DA +I++VEK A + RLAEDRF+N+ P I++TAKG PD+ATR L ++
Sbjct: 202 KLILNADARYIIIVEKHAIFQRLAEDRFFNQIPSILITAKGYPDIATRFLLHRISRAFPD 261
Query: 309 LPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRL 368
LP+LALVD +P GL IL + GS M +S ++KWLG+R DL +P+Q +
Sbjct: 262 LPILALVDWNPAGLAILCTFKFGSVGMGLESYRYAC-NVKWLGLRGHDLP--MLPDQSFV 318
Query: 369 PMTEQDIKTGKDLLEEDFVKK------NPGWVEELNLMVKTKQKAEIQALSSFGFQYLSE 422
P+ +D++ + L+ + N + EE+ LMV++ ++AEI+AL G+ YL +
Sbjct: 319 PLKTKDLQIAQSLMSSRILPVSHSEPLNENYKEEVTLMVESGRRAEIEALYFHGYDYLGK 378
Query: 423 VYLPLKLQQKDWL 435
Y+ K+ Q D++
Sbjct: 379 -YIAKKIVQSDYI 390
>gi|297836981|ref|XP_002886372.1| hypothetical protein ARALYDRAFT_474957 [Arabidopsis lyrata subsp.
lyrata]
gi|297332213|gb|EFH62631.1| hypothetical protein ARALYDRAFT_474957 [Arabidopsis lyrata subsp.
lyrata]
Length = 383
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 186/328 (56%), Gaps = 14/328 (4%)
Query: 116 SRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRD 175
S + NQ + ++ I L T + T + K++ + Q+ L+ VT+R+
Sbjct: 62 SNSCINQGILTDVSYIFLSTSFTKSSLTNAKTAKTFVRVWKVMEICFQILLQEKRVTQRE 121
Query: 176 LFYTDV----KLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNG-DM 230
LFY + F Q + + + DV +L C+R SL ++A+ +G+V GRL + G +
Sbjct: 122 LFYKLLCDSPDYFSSQIEVNRTVQDVVALLRCSRYSLGIMASSRGLVAGRLFLQEPGKEA 181
Query: 231 IDCTKMGMGGKAIPPNIDRVGD--MQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTA 288
+DC+ G G I +++ + + M+SDA +I++VEK A + RL EDR +N PC+ +TA
Sbjct: 182 VDCSACGSSGFTITGDLNLLDNTIMRSDARYIIIVEKHAIFHRLVEDRVFNHIPCVFITA 241
Query: 289 KGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDI 347
KG PD+ATR FL +M LP+LALVD +P GL IL + GS M ++ ++
Sbjct: 242 KGYPDIATRFFLHRMSTTFPNLPILALVDWNPAGLAILCTFKFGSIGMGLEAYRYAC-NV 300
Query: 348 KWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKA 407
KW+G+R DL+ IP++ +P+ +D + K LL ++ N + +EL+LMV+T ++A
Sbjct: 301 KWIGLRGDDLN--LIPDESLVPLKPKDSQIAKSLLSSKILQDN--YRDELSLMVQTGKRA 356
Query: 408 EIQALSSFGFQYLSEVYLPLKLQQKDWL 435
EI+AL G+ YL + Y+ K+ Q ++
Sbjct: 357 EIEALYCHGYNYLGK-YIATKIVQGKYI 383
>gi|3024738|sp|O05208.1|TOP6A_SULSH RecName: Full=Type II DNA topoisomerase VI subunit A
gi|167745000|pdb|2ZBK|A Chain A, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
gi|167745002|pdb|2ZBK|C Chain C, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
gi|167745004|pdb|2ZBK|E Chain E, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
gi|167745006|pdb|2ZBK|G Chain G, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
gi|1926404|emb|CAA71605.1| type II DNA topoisomerase subunit A [Sulfolobus shibatae B12]
Length = 389
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 195/365 (53%), Gaps = 27/365 (7%)
Query: 97 ILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVK 156
L + + G ++P R SN +Y + ++L +K R F L+ ++ TV
Sbjct: 25 FLNLVEQLKKGEPLVMEIPMRTLSNAIYDEKRKLLLLGEKKLRRNFLDLNEAKRFMQTVL 84
Query: 157 ILSLIHQLCLRNIHVTKRDLFY-----------------TDVKLFQDQTQSDAVLDDVAC 199
+ S+I+ + + + T RDL+Y ++ + +Q +SD+V+ D+
Sbjct: 85 MASIIYDALVSDEYPTIRDLYYRGKHSLLLKSIEGNKIVSEENTWDEQKESDSVIVDIEV 144
Query: 200 ILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMF 259
R + +++ EKG VVG L D+ID +K G G AI P D + + DA F
Sbjct: 145 FTSLLREEMLILSKEKGKVVGNLRIRSGNDVIDLSKTGHGAYAIEPTPDLIDFIDVDAEF 204
Query: 260 ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDP 319
+L+VEKDA + +L F+ ++ I++T+ GQPD ATR F+R++ ELKLPV L D+DP
Sbjct: 205 VLVVEKDAVFQQLHRAGFWKQYKSILITSAGQPDRATRRFVRRLNEELKLPVYILTDADP 264
Query: 320 YGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL-----DKYKIPEQCR----LPM 370
YG I SV+ GS ++SY+S L TPD K+LG+ D+ K + E R +
Sbjct: 265 YGWYIFSVFRIGSISLSYESERLATPDAKFLGVSMGDIFGNSRKKPYLSEAERKNYIIKA 324
Query: 371 TEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
+ DIK +++ ++ K W EE+N ++ K K EI+A++S G ++L+ Y+P K+
Sbjct: 325 KDADIKRAEEIKNYEWF-KTKAWQEEINTFLQRKAKLEIEAMASKGLKFLAFQYIPEKIT 383
Query: 431 QKDWL 435
KD++
Sbjct: 384 NKDYI 388
>gi|227827527|ref|YP_002829307.1| DNA topoisomerase VI subunit A [Sulfolobus islandicus M.14.25]
gi|229579029|ref|YP_002837427.1| DNA topoisomerase VI subunit A [Sulfolobus islandicus Y.G.57.14]
gi|229584730|ref|YP_002843232.1| DNA topoisomerase VI subunit A [Sulfolobus islandicus M.16.27]
gi|238619684|ref|YP_002914510.1| DNA topoisomerase VI subunit A [Sulfolobus islandicus M.16.4]
gi|284997637|ref|YP_003419404.1| Spo11/DNA topoisomerase VI, subunit A [Sulfolobus islandicus
L.D.8.5]
gi|227459323|gb|ACP38009.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus M.14.25]
gi|228009743|gb|ACP45505.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus
Y.G.57.14]
gi|228019780|gb|ACP55187.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus M.16.27]
gi|238380754|gb|ACR41842.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus M.16.4]
gi|284445532|gb|ADB87034.1| Spo11/DNA topoisomerase VI, subunit A [Sulfolobus islandicus
L.D.8.5]
Length = 389
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 195/365 (53%), Gaps = 27/365 (7%)
Query: 97 ILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVK 156
L + + G ++P R SN +Y + ++L +K R F L+ ++ TV
Sbjct: 25 FLNLVEQLKKGEPLVMEIPMRTLSNAIYDEKRKLLLLGEKKLKRNFLDLNEAKRFMQTVL 84
Query: 157 ILSLIHQLCLRNIHVTKRDLFY-----------------TDVKLFQDQTQSDAVLDDVAC 199
+ S+I+ + + + T RDL+Y ++ + +Q +SD+V+ D+
Sbjct: 85 MASIIYDALVSDEYPTIRDLYYRGKHSLLLKSIEGNKIVSEENTWDEQKESDSVIVDIEV 144
Query: 200 ILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMF 259
R + +++ EKG VVG L D+ID +K G G AI P D + + DA F
Sbjct: 145 FTSLLREEMLILSKEKGKVVGNLRIRSGNDVIDLSKTGHGAYAIEPTPDLIDFIDVDAEF 204
Query: 260 ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDP 319
+L+VEKDA + +L F+ ++ I++T+ GQPD ATR F+R++ ELKLPV L D+DP
Sbjct: 205 VLVVEKDAVFQQLHRAGFWKQYKSILITSAGQPDRATRRFVRRLNEELKLPVYILTDADP 264
Query: 320 YGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL-----DKYKIPEQCR----LPM 370
YG I SV+ GS ++SY+S L TPD K+LG+ D+ K + E R +
Sbjct: 265 YGWYIFSVFRIGSISLSYESERLATPDSKFLGVSMGDIFGNSRKKPYLSEAERKNYIIKA 324
Query: 371 TEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
+ DIK +++ ++ K W EE+N ++ K K EI+A++S G ++L+ Y+P K+
Sbjct: 325 KDADIKRAEEIKNYEWF-KTKAWQEEINTFLQRKAKLEIEAMASKGLKFLAFQYIPEKIT 383
Query: 431 QKDWL 435
KD++
Sbjct: 384 NKDYI 388
>gi|385773196|ref|YP_005645762.1| DNA topoisomerase [Sulfolobus islandicus HVE10/4]
gi|385775830|ref|YP_005648398.1| DNA topoisomerase [Sulfolobus islandicus REY15A]
gi|323474578|gb|ADX85184.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus REY15A]
gi|323477310|gb|ADX82548.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus HVE10/4]
Length = 389
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 195/365 (53%), Gaps = 27/365 (7%)
Query: 97 ILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVK 156
L + + G ++P R SN +Y + ++L +K R F L+ ++ TV
Sbjct: 25 FLNLVEQLKKGEPLVMEIPMRTLSNAIYDEKRKLLLLGEKKLKRNFLDLNEAKRFMQTVL 84
Query: 157 ILSLIHQLCLRNIHVTKRDLFY-----------------TDVKLFQDQTQSDAVLDDVAC 199
+ S+I+ + + + T RDL+Y ++ + +Q +SD+V+ D+
Sbjct: 85 MASIIYDALVSDEYPTIRDLYYRGKHSLLLKSIEGNKIVSEENTWDEQKESDSVIVDIEV 144
Query: 200 ILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMF 259
R + +++ EKG VVG L D+ID +K G G AI P D + + DA F
Sbjct: 145 FTSLLREEMLILSKEKGKVVGNLRIRSGNDVIDLSKTGHGAYAIEPTPDLIDFIDVDAEF 204
Query: 260 ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDP 319
+L+VEKDA + +L F+ ++ I++T+ GQPD ATR F+R++ ELKLPV L D+DP
Sbjct: 205 VLVVEKDAVFQQLHRAGFWKQYKSILITSAGQPDRATRRFVRRLNEELKLPVYILTDADP 264
Query: 320 YGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL-----DKYKIPEQCR----LPM 370
YG I SV+ GS ++SY+S L TPD K+LG+ D+ K + E R +
Sbjct: 265 YGWYIFSVFRIGSISLSYESERLATPDSKFLGVSMGDIFGNSRKKPYLSEAERKNYIIKA 324
Query: 371 TEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
+ DIK +++ ++ K W EE+N ++ K K EI+A++S G ++L+ Y+P K+
Sbjct: 325 KDADIKRAEEIKNYEWF-KTKAWQEEINTFLQRKAKLEIEAMASKGLKFLAFQYIPEKIT 383
Query: 431 QKDWL 435
KD++
Sbjct: 384 NKDYI 388
>gi|229582220|ref|YP_002840619.1| DNA topoisomerase VI subunit A [Sulfolobus islandicus Y.N.15.51]
gi|228012936|gb|ACP48697.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus
Y.N.15.51]
Length = 389
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 194/365 (53%), Gaps = 27/365 (7%)
Query: 97 ILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVK 156
L + + G ++P R SN +Y + ++L +K R F L+ ++ TV
Sbjct: 25 FLNLVEQLKKGEPLVMEIPMRTLSNAIYDEKRKLLLLGEKKLKRNFLDLNEAKRFMQTVL 84
Query: 157 ILSLIHQLCLRNIHVTKRDLFY-----------------TDVKLFQDQTQSDAVLDDVAC 199
+ S+I+ + + + T RDL+Y ++ + +Q +SD+V+ D+
Sbjct: 85 MASIIYDALVSDEYPTIRDLYYRGKHSLLLKSIEGNKIVSEENTWDEQKESDSVIVDIEV 144
Query: 200 ILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMF 259
R + +++ EKG VVG L D+ID +K G G AI P D + + DA F
Sbjct: 145 FTSLLREEMLILSKEKGKVVGNLRIRSGNDVIDLSKTGHGAYAIEPTPDLIDFIDVDAEF 204
Query: 260 ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDP 319
+L+VEKDA + +L F+ ++ I++T+ GQPD ATR F+R++ ELKLPV L D+DP
Sbjct: 205 VLVVEKDAVFQQLHRAGFWKQYKSILITSAGQPDRATRRFVRRLNEELKLPVYILTDADP 264
Query: 320 YGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL-----DKYKIPEQCR----LPM 370
YG I SV+ GS ++SY+S L TPD K+LG+ D+ K + E R +
Sbjct: 265 YGWYIFSVFRIGSISLSYESERLATPDSKFLGVSMGDIFGNSRKKPYLSEAERKNYIIKA 324
Query: 371 TEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
+ DIK +++ ++ K W EE+N ++ K K EI+A++S G ++L Y+P K+
Sbjct: 325 KDADIKRAEEIKNYEWF-KTKAWQEEINTFLQRKAKLEIEAMASKGLKFLGFQYIPEKIT 383
Query: 431 QKDWL 435
KD++
Sbjct: 384 NKDYI 388
>gi|357139785|ref|XP_003571458.1| PREDICTED: meiotic recombination protein SPO11-2-like [Brachypodium
distachyon]
Length = 382
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/295 (37%), Positives = 177/295 (60%), Gaps = 15/295 (5%)
Query: 150 KSTITV-KILSLIHQLCLRNIHVTKRDLFYTDV----KLFQDQTQSDAVLDDVACILGCT 204
KS + V K++ + +++ VT+R+LFY + K F Q + + DV +L CT
Sbjct: 94 KSFVRVWKVMEMCYKILGEGKLVTQRELFYKLLSDSPKYFTCQRHVNQTIQDVVSLLRCT 153
Query: 205 RSSLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVG--DMQSDAMFIL 261
R SL ++A+ +G ++GRL+ + G+ IDC+ +G G AI +++++ ++ SDA +++
Sbjct: 154 RQSLGIMASSRGALIGRLLLHEPEGEHIDCSILGPSGHAITGDLNQLSKLNLYSDARYLI 213
Query: 262 LVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPY 320
LVEKDA + RLAEDR YN+ PCI++TAKG PD+ATR L ++ +P+ ALVD +P
Sbjct: 214 LVEKDAVFQRLAEDRLYNQLPCIVITAKGYPDIATRFILHRLSQTFPNMPIFALVDWNPA 273
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 380
GL IL Y GS +M +S ++KWLGIR DL+ IP+ + +D++ K
Sbjct: 274 GLAILCTYKYGSISMGLESYRYAC-NVKWLGIRGDDLE--LIPQSAFQELKPRDLQIAKG 330
Query: 381 LLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
L+ F++ EL LMV+ ++AEI+AL GF +L + Y+ K+ Q D++
Sbjct: 331 LMSSKFLQDKHR--AELALMVEMGKRAEIEALYCHGFDFLGK-YIARKIVQGDYI 382
>gi|332797101|ref|YP_004458601.1| DNA topoisomerase VI subunit A [Acidianus hospitalis W1]
gi|332694836|gb|AEE94303.1| DNA topoisomerase VI, subunit A [Acidianus hospitalis W1]
Length = 386
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/365 (32%), Positives = 197/365 (53%), Gaps = 29/365 (7%)
Query: 95 TLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTIT 154
TL+ QI + G ++P R +N +Y ++L ++ R F L+ R+ T
Sbjct: 26 TLLDQINK----GEPLVLEIPKRTLNNTVYDENRKLLLLGEEKLKRSFLDLNEARRFMQT 81
Query: 155 VKILSLIHQLCLRNIHVTKRDLFY---------------TDVKLFQDQTQSDAVLDDVAC 199
+ S+I+ + N + T RDL+Y + + +Q +SD+V+ D+
Sbjct: 82 TLMASIIYDALVNNEYPTIRDLYYRGKHSIVLKAPNGKTYEENTWDEQKESDSVIVDIEV 141
Query: 200 ILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMF 259
R + +++ EKG VVG + D+ID +KMG G +I P D + + A F
Sbjct: 142 FTSLLREDMLILSKEKGKVVGDMRIRSGNDVIDLSKMGHGAYSIEPTPDLIDFVDVKADF 201
Query: 260 ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDP 319
+L+VEKDA + +L + F+ ++ I+VT+ GQPD ATR F+R++ ELKLPV + D+DP
Sbjct: 202 VLVVEKDAVFQQLHREGFWKKYNAILVTSAGQPDRATRRFVRRLNEELKLPVYIMTDADP 261
Query: 320 YGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL-----DKYKIPEQCR----LPM 370
YG I SV+ GS N+SY+S L TP+ ++LG+ D+ K + E+ R +
Sbjct: 262 YGWYIYSVFRIGSINLSYESERLATPNARFLGVSMGDIFGTPKKKAYLTERERNAFIIKA 321
Query: 371 TEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
+ DIK ++ ++ K W EE+N+ ++ K K EI+A++S G ++L+ Y+P K+Q
Sbjct: 322 KDYDIKRALEIKNYEWF-KTKAWQEEINMFLQKKAKLEIEAMASKGLKFLAFQYIPEKIQ 380
Query: 431 QKDWL 435
D++
Sbjct: 381 TNDFI 385
>gi|227830214|ref|YP_002831994.1| DNA topoisomerase VI subunit A [Sulfolobus islandicus L.S.2.15]
gi|227456662|gb|ACP35349.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus
L.S.2.15]
Length = 389
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 194/365 (53%), Gaps = 27/365 (7%)
Query: 97 ILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVK 156
L + + G ++P R SN +Y + ++L +K R F L+ ++ TV
Sbjct: 25 FLNLVEQLKKGEPLVMEIPMRTLSNAIYDEKRKLLLLGEKKLKRNFLDLNEAKRFMQTVL 84
Query: 157 ILSLIHQLCLRNIHVTKRDLFY-----------------TDVKLFQDQTQSDAVLDDVAC 199
+ S+I + + + T RDL+Y ++ + +Q +SD+V+ D+
Sbjct: 85 MASIIFDALVSDEYPTIRDLYYRGKHSLLLKSIEGNKIVSEENTWDEQKESDSVIVDIEV 144
Query: 200 ILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMF 259
R + +++ EKG VVG L D+ID +K G G AI P D + + DA F
Sbjct: 145 FTSLLREEMLILSKEKGKVVGNLRIRSGNDVIDLSKTGHGAYAIEPTPDLIDFIDVDAEF 204
Query: 260 ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDP 319
+L+VEKDA + +L F+ ++ I++T+ GQPD ATR F+R++ ELKLPV L D+DP
Sbjct: 205 VLVVEKDAVFQQLHRAGFWKQYKSILITSAGQPDRATRRFVRRLNEELKLPVYILTDADP 264
Query: 320 YGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL-----DKYKIPEQCR----LPM 370
YG I SV+ GS ++SY+S L TPD K+LG+ D+ K + E R +
Sbjct: 265 YGWYIFSVFRIGSISLSYESERLATPDSKFLGVSMGDIFGNSRKKPYLSEAERKNYIIKA 324
Query: 371 TEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
+ DIK +++ ++ K W EE+N ++ K K EI+A++S G ++L+ Y+P K+
Sbjct: 325 KDADIKRAEEIKNYEWF-KTKAWQEEINTFLQRKAKLEIEAMASKGLKFLAFQYIPEKIT 383
Query: 431 QKDWL 435
KD++
Sbjct: 384 NKDYI 388
>gi|356540428|ref|XP_003538691.1| PREDICTED: meiotic recombination protein SPO11-2-like [Glycine max]
Length = 382
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 120/368 (32%), Positives = 210/368 (57%), Gaps = 28/368 (7%)
Query: 86 LSAVQSTIETLILQIARSILAGNGFSFQVP------SRASSNQLYVPELDRIVLKD---- 135
L+ V++ IE +L + + A + +P S + N + EL R+ L +
Sbjct: 25 LAQVRARIEVSVLNFLKILNASSPAISDLPLIQRKYSNSRVNHGLLTELSRVFLSNSVST 84
Query: 136 KTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDV----KLFQDQTQSD 191
++ +RP A+ + VR K++ + +Q+ L+ VT+R+LFY + LF QT +
Sbjct: 85 RSLMRPNAAKAFVR----VWKVMEMCYQILLQEKRVTQRELFYKLLCDSPHLFPSQTHVN 140
Query: 192 AVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNG-DMIDCTKMGMGGKAIPPNIDRV 250
+ D+ +L C+R SL ++A+ +G+V GRLI + G + +DC+ G G AI +++ +
Sbjct: 141 RTIQDLVALLRCSRFSLGIMASSRGLVAGRLILQEPGKEAVDCSLCGSSGFAISGDLNLL 200
Query: 251 GDM--QSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL- 307
+ +DA ++++VEK A + RL EDRF+++ P I++TAKG PD+ATR L ++
Sbjct: 201 DSLVLNADARYVIIVEKHAIFQRLTEDRFFHQIPSILITAKGYPDIATRFLLYRISKAFP 260
Query: 308 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR 367
LP+LALVD +P GL IL + GS M ++ ++KWLG+R DL +P Q
Sbjct: 261 DLPILALVDWNPAGLAILCTFKFGSIGMGLEAYRYAC-NVKWLGLRGHDLP--LLPNQSF 317
Query: 368 LPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPL 427
+P+ +D++ + L+ ++ N + EE+ LMV++ ++AEI+AL G+ YL + Y+
Sbjct: 318 VPLKPKDLQIAQSLMSSGILQDN--YKEEVALMVQSGRRAEIEALYFNGYDYLGK-YIAK 374
Query: 428 KLQQKDWL 435
K+ Q D++
Sbjct: 375 KIVQSDYV 382
>gi|283778748|ref|YP_003369503.1| DNA topoisomerase [Pirellula staleyi DSM 6068]
gi|283437201|gb|ADB15643.1| DNA topoisomerase (ATP-hydrolyzing) [Pirellula staleyi DSM 6068]
Length = 384
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/405 (30%), Positives = 207/405 (51%), Gaps = 35/405 (8%)
Query: 44 LAATTTTTAAANGASTSSSSSKPLTLSDL---SLSATCREVTDLSLSAVQSTIETLILQI 100
+A T+ T AN ++P+ L+D +L + + +D++ SA Q T +
Sbjct: 1 MAKKTSNTRPAN------KPAEPVKLTDKDKKTLDSLRKLASDVAKSATQKTAPEM---- 50
Query: 101 ARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSL 160
SIL SR+ SN + + + T R +LS + TV + S
Sbjct: 51 --SIL----------SRSLSNVKFNQSQKILEMGSSKTSRELFNLSQAKAFMQTVLVGSG 98
Query: 161 IHQLCLRNIHVTKRDLFY--------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIA 212
+L + + R L+Y T + F++Q++SD +++DV +L R L++ A
Sbjct: 99 CKRLIEQGKTTSLRGLYYMLKHTIDGTSEETFEEQSESDTMIEDVEVLLSSLREELHLYA 158
Query: 213 AEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNI--DRVGDMQSDAMFILLVEKDAAYI 270
++G +VG++ D+GD IDCT+MG GG IP + DR+ A FIL VEKD +
Sbjct: 159 QKRGEMVGQITVVDSGDEIDCTRMGSGGYGIPSIVEPDRITFKNVKAKFILHVEKDTVWQ 218
Query: 271 RLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGC 330
R ED+F+ + CI+ GQP R L ++ ELKLPV L+D+DP+G I SV
Sbjct: 219 RFNEDKFWLKHNCILTHGAGQPPRGVRRMLYRLHNELKLPVYCLLDNDPWGYYIYSVIKQ 278
Query: 331 GSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKN 390
GS N++Y+S + P ++LG+R D D+ + ++ + +QDIK K + + K
Sbjct: 279 GSINLAYESERMAIPGARYLGLRSLDYDRCGLSSSVKIKLNDQDIKRAKQIASYPWFIKK 338
Query: 391 PGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
W +E+ +M+K K E+++L S Y++E Y+P L+ ++L
Sbjct: 339 KAWQKEIEMMLKNGFKLEVESLISKDISYVTEEYVPELLESGEFL 383
>gi|70607073|ref|YP_255943.1| DNA topoisomerase VI subunit A [Sulfolobus acidocaldarius DSM 639]
gi|449067312|ref|YP_007434394.1| DNA topoisomerase VI subunit A [Sulfolobus acidocaldarius N8]
gi|449069582|ref|YP_007436663.1| DNA topoisomerase VI subunit A [Sulfolobus acidocaldarius Ron12/I]
gi|68567721|gb|AAY80650.1| DNA topoisomerase VI, subunit A [Sulfolobus acidocaldarius DSM 639]
gi|449035820|gb|AGE71246.1| DNA topoisomerase VI subunit A [Sulfolobus acidocaldarius N8]
gi|449038090|gb|AGE73515.1| DNA topoisomerase VI subunit A [Sulfolobus acidocaldarius Ron12/I]
Length = 386
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/347 (32%), Positives = 192/347 (55%), Gaps = 25/347 (7%)
Query: 113 QVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVT 172
++P R SN +Y + ++L + R F L+ ++ T + S+I+ + + + T
Sbjct: 40 EIPKRTLSNTVYDEKRGLLILGKEKLKRNFLDLNEAKRFMQTTLMASIIYDALVNDEYPT 99
Query: 173 KRDLFYT---------------DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV 217
RDL+Y + + +Q +SD+V+ D+ R + +++ EKG
Sbjct: 100 IRDLYYRGKHSIILKDPNGRAYEENTWDEQKESDSVIVDIEVFTSLLREDMLILSKEKGK 159
Query: 218 VVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRF 277
VVG + D+ID +KMG G +I P D + M +A F+L+VEKDA + +L F
Sbjct: 160 VVGDMRIRSGNDVIDLSKMGHGAYSIEPTPDLIDFMDINAEFVLVVEKDAVFQQLHRAGF 219
Query: 278 YNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSY 337
+ ++ I+VT+ GQPD ATR F+R++ ELKLPV L D+DPYG I SV+ GS ++SY
Sbjct: 220 WKQYKAILVTSAGQPDRATRRFVRRLNEELKLPVYILTDADPYGWYIYSVFKIGSISLSY 279
Query: 338 DSANLTTPDIKWLGIRPSDL--DKYKIP---EQCR----LPMTEQDIKTGKDLLEEDFVK 388
+S L TP+ ++LG+ +D+ DK K P +Q R + + D+K ++ ++
Sbjct: 280 ESERLATPNARFLGVSMTDIFGDKGKKPYLSDQERRNYIIKAKDADVKRAMEIKNYEWF- 338
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
K GW E+++ + K K EI+A++S G ++L+ Y+P K++ D++
Sbjct: 339 KTKGWQHEISVFLDKKSKLEIEAMASKGLRFLAFQYIPEKIKNSDFI 385
>gi|269986172|gb|EEZ92484.1| DNA topoisomerase (ATP-hydrolyzing) [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 367
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 184/353 (52%), Gaps = 9/353 (2%)
Query: 91 STIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRK 150
S +E L + + I G +P R SN Y E I L + R F ++ VRK
Sbjct: 15 SVLEDLGKGVYQQIEKGENPYLTLPVRGLSNVKYDTESRMITLGSGLSRRYFLNVGHVRK 74
Query: 151 STITVKILSLIHQLCLRNIHVTKRDLFY--------TDVKLFQDQTQSDAVLDDVACILG 202
T+ + ++ +L + H + R FY T + + DQ +++ ++D+ I
Sbjct: 75 FIQTMAMAAVSRELIKNDKHTSLRSAFYQVRRTIPGTKIDVVDDQIETNKAIEDLELITD 134
Query: 203 CTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILL 262
TR LN+ A + G V G + D GD+ID +KMG GG A+P N++ + + DA F++
Sbjct: 135 LTREQLNINANKNGAVAGEVTVEDRGDIIDWSKMGSGGWAVPSNVEDIIFKKVDAKFVIY 194
Query: 263 VEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGL 322
+EK + RL ED+ + + C+I+ ++GQ R L+++ E LPV L D D +G+
Sbjct: 195 MEKATIWDRLNEDKAWKKLHCVIIASQGQATRGIRRLLQRLSREHNLPVYVLTDGDIWGV 254
Query: 323 KILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLL 382
I S GS +++ S L+ P+ K++G+ D+DKY++ + + DI K +
Sbjct: 255 YIYSAIKFGSIALAHVSDKLSLPEAKFMGLTMEDIDKYELRRHL-IKFKDVDIARIKQIK 313
Query: 383 EEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
++ K N W+EEL+ M K K E+ A ++ G +++E YLP KL+ KD+L
Sbjct: 314 NYEWFKNNKKWMEELSKMEKLGAKVELDAFTAKGLSFMTETYLPEKLKDKDFL 366
>gi|87306802|ref|ZP_01088948.1| DNA topoisomerase VI subunit A [Blastopirellula marina DSM 3645]
gi|87290175|gb|EAQ82063.1| DNA topoisomerase VI subunit A [Blastopirellula marina DSM 3645]
Length = 389
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 178/334 (53%), Gaps = 10/334 (2%)
Query: 112 FQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHV 171
++P+R+ SN Y + + TT R +L+ + T+ + +L
Sbjct: 55 LEIPTRSLSNVRYNKSQRILEMGKNTTARQLFNLNQAKSYMQTMLAAAGCKRLVESGKTT 114
Query: 172 TKRDLFY--------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLI 223
+ R L+Y T + F DQ +SD +++D+ +L R L++ A ++G +VG +I
Sbjct: 115 SIRGLYYLMKHTIAGTKEETFSDQAESDPIIEDLEVLLESLREELHLYAQQRGSMVGNII 174
Query: 224 FSDNGDMIDCTKMGMGGKAIPPNI--DRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
+D GD IDC++MG GG IP + D + + A F+L VEKD + R ED+F+ +
Sbjct: 175 LNDKGDTIDCSRMGSGGYGIPSIVEADVIQFRECGADFVLHVEKDTVWQRFNEDKFWKKH 234
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
CI+ GQP R L ++ ELKLP+ + D+DP+G I SV GS N++Y+S
Sbjct: 235 NCILTHGSGQPPRGVRRLLHRLHNELKLPIYCVFDNDPWGYYIYSVIKQGSINLAYESKR 294
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
+ P+ K+LG+R D ++ + ++ + + D K K + + + ++ W +E+ ++
Sbjct: 295 MAVPEAKFLGLRAIDYERCNLNPSVQIALNDTDRKRAKQIAKYPWFEQKKTWQKEIQKLL 354
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
K E++AL S G Y+++VY+P +L+ + WL
Sbjct: 355 DNGFKLEVEALISQGLSYVTDVYVPERLEDRTWL 388
>gi|347523834|ref|YP_004781404.1| DNA topoisomerase [Pyrolobus fumarii 1A]
gi|343460716|gb|AEM39152.1| DNA topoisomerase (ATP-hydrolyzing) [Pyrolobus fumarii 1A]
Length = 388
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 113/353 (32%), Positives = 191/353 (54%), Gaps = 25/353 (7%)
Query: 107 GNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCL 166
G + +P R SN +Y + ++L + R +L +K T+ + +I++ +
Sbjct: 36 GENPTLVLPKRTLSNTIYDEKRKMLLLGPEKLRRSLFNLHEAKKFMQTMLMAKIIYEALV 95
Query: 167 RNIHVTKRDLFY---------------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ + T RDL+Y + + +Q +SDAV+ D+ G R + ++
Sbjct: 96 NDEYPTIRDLYYRGKHTIVFVDDRGRRIEENTWDEQKESDAVIRDIEVFTGMLREEMLIL 155
Query: 212 AAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIR 271
+ EKG VVG + D+ID +KMG G AI P D + + DA F+L++EKDA + +
Sbjct: 156 SKEKGKVVGNMRIRSGNDVIDLSKMGHGAWAIEPTPDLIEFLDVDAEFVLVIEKDAVFQQ 215
Query: 272 LAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCG 331
L F+ ++ I+VT+ GQPD ATR F+R++ EL LPV L D+DPYG I SV+ G
Sbjct: 216 LHRIGFWRKYRAILVTSAGQPDRATRRFVRRLNEELGLPVYILTDADPYGWYIYSVFKIG 275
Query: 332 SKNMSYDSANLTTPDIKWLGIRPSDL--DKYKIP---EQCR----LPMTEQDIKTGKDLL 382
S +SY+S L TP ++LG+ +D+ D+ K P E R + + DIK ++L
Sbjct: 276 SITLSYESERLATPKARFLGVSMTDIFGDERKKPYLTETERRNFIIKAKDADIKRAEELR 335
Query: 383 EEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+ + P W +E+++ ++ K K EI+AL+ G ++L+ Y+P K++ D++
Sbjct: 336 NYKWF-QTPQWRKEIDIFLRKKAKLEIEALAGKGLRFLAFKYIPEKIETGDFI 387
>gi|15921561|ref|NP_377230.1| DNA topoisomerase VI subunit A [Sulfolobus tokodaii str. 7]
gi|22654151|sp|Q971T1.1|TOP6A_SULTO RecName: Full=Type II DNA topoisomerase VI subunit A
gi|15622347|dbj|BAB66339.1| DNA topoisomerase VI subunit A [Sulfolobus tokodaii str. 7]
Length = 387
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 115/368 (31%), Positives = 198/368 (53%), Gaps = 25/368 (6%)
Query: 92 TIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKS 151
T+ + +++ I + ++P R N +Y + ++L ++ R F L+ ++
Sbjct: 20 TLRQVFVKLIEQINNSEPPTMEIPKRTLGNTIYDEKRKLLLLGEEKLKRSFFDLNESKRF 79
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYT---------------DVKLFQDQTQSDAVLDD 196
TV + S+I+ + + + T RDL+Y + + +Q +SD+V+ D
Sbjct: 80 MQTVLMASIIYDALINDEYPTIRDLYYRGKHSIILKDPRGKTYEENTWDEQKESDSVIMD 139
Query: 197 VACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSD 256
+ R + +++ EKG VVG + D+ID +KMG G +I P D + + +
Sbjct: 140 IEVFTSLLREDMLILSKEKGKVVGDMRIRSGNDIIDLSKMGHGAYSIEPTPDLIDFVDIN 199
Query: 257 AMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVD 316
A F+L+VEKDA + +L F+ ++ I+VT+ GQPD ATR F+R++ ELKLPV L D
Sbjct: 200 AEFVLVVEKDAVFQQLHRAGFWKQYKAILVTSAGQPDRATRRFVRRLNEELKLPVYILTD 259
Query: 317 SDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL--DKYKIP---EQCR---- 367
+DPYG I SV+ GS ++SY+S L TP+ K+LG+ +D+ D K P EQ R
Sbjct: 260 ADPYGWYIYSVFRIGSISLSYESERLATPNAKFLGVSMTDIFGDSNKKPYLSEQERRNYI 319
Query: 368 LPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPL 427
+ + DIK ++ + K W E+ + + K K EI+A++S G ++L+ Y+P
Sbjct: 320 IKAKDADIKRATEIKNYQWF-KTKAWQHEIEIFLNKKSKLEIEAMASKGLKFLAFQYIPE 378
Query: 428 KLQQKDWL 435
K++ KD++
Sbjct: 379 KIKSKDYI 386
>gi|41615325|ref|NP_963823.1| DNA topoisomerase VI subunit A [Nanoarchaeum equitans Kin4-M]
gi|40069049|gb|AAR39384.1| NEQ542 [Nanoarchaeum equitans Kin4-M]
Length = 359
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 179/322 (55%), Gaps = 12/322 (3%)
Query: 124 YVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYT---- 179
Y E D I LK+K ++R F + R+ T T+ + +L +L N H + R+++Y
Sbjct: 39 YDEEKDIIKLKEKQSVRRFFDVGETRRFTQTLLVAALAKELVESNKHASLREVYYQLKHT 98
Query: 180 ----DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDN--GDMIDC 233
+ F +Q++SD+V++D+ L R ++A KG + G + D GD +C
Sbjct: 99 IPYINENTFDEQSESDSVIEDLERALRAIREQFGIVADRKGYLYGDITLKDRNRGDEWNC 158
Query: 234 TKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPD 293
+K+G+GG IP I+ + + +A ++L+VEKDA + RL E+RF + +++ KGQP
Sbjct: 159 SKLGLGGWGIPSTIEEIDIVDVNADYVLVVEKDAMFERLIEERFPEKNRALLIATKGQPS 218
Query: 294 VATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIR 353
TR +RK++ E+ LPV D DP+G I SV GS N++ S L TPD K++G+
Sbjct: 219 RGTRRLIRKLRYEVGLPVYVFTDGDPWGFYIYSVIKRGSMNLAMFSEQLATPDAKFIGLT 278
Query: 354 PSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALS 413
D+ KY + + + + D+K K+L+E + KN W + N M+K KAE AL+
Sbjct: 279 IDDVIKYDLKD-VAIQLKPIDVKRVKELMEYPWF-KNKEWQRQFNKMLKLNIKAEQDALA 336
Query: 414 SFGFQYLSEVYLPLKLQQKDWL 435
++++ YLP K+++ ++L
Sbjct: 337 KHSLEFVANKYLPEKIEKGEFL 358
>gi|357494925|ref|XP_003617751.1| Meiotic recombination protein SPO11-1 [Medicago truncatula]
gi|355519086|gb|AET00710.1| Meiotic recombination protein SPO11-1 [Medicago truncatula]
Length = 439
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 104/324 (32%), Positives = 165/324 (50%), Gaps = 48/324 (14%)
Query: 157 ILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKG 216
I+ L+ +L N H +KRD++Y +F DQ+ D ++D+ + C+R +LNV++A G
Sbjct: 113 IILLLFKLGFENKHSSKRDIYYMHPSVFLDQSVVDHAINDICVRMQCSRHNLNVVSAGNG 172
Query: 217 VVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDR 276
+V+G + F + + DC P ++ + D+ S A +IL+VEK++ + LA D
Sbjct: 173 LVMGWIRFVEGKKIFDCINSPNTAHPTPVYVEEIKDIVSMAHYILVVEKESVFRILANDH 232
Query: 277 FYNRFPCIIVT------------------------AKGQPDVATRL-------------- 298
F N CI+++ +G PD+ TR
Sbjct: 233 FCNANHCIVISVSNFMKTLASFDSILLCINSIFSKGRGYPDIPTRRCEKSRPLSLDIMLP 292
Query: 299 ---------FLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKW 349
FLR + L +P LVD DPYG IL+ Y GS M+YD+ +L P+I W
Sbjct: 293 ILCILYFNRFLRLLVDNLYIPAYCLVDCDPYGFDILTTYRFGSMQMAYDTKHLRVPEIHW 352
Query: 350 LGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKN-PGWVEELNLMVKTKQKAE 408
LG PSD D+Y +P+QC LP+T +D + K +L ++++ P W EL +M++ K E
Sbjct: 353 LGAFPSDSDRYFVPKQCLLPLTVEDKRKIKAMLLRCYLQREVPEWRLELRMMLQKGVKFE 412
Query: 409 IQALSSFGFQYLSEVYLPLKLQQK 432
I+ALS +L+E Y+P K+ K
Sbjct: 413 IEALSVHTLSFLTESYIPSKIHGK 436
>gi|218200496|gb|EEC82923.1| hypothetical protein OsI_27876 [Oryza sativa Indica Group]
Length = 503
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 169/291 (58%), Gaps = 14/291 (4%)
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVK----LFQDQTQSDAVLDDVACILGCTRSSL 208
I K++ + +++ VT R+LFYT + F Q + + DV +L CTR SL
Sbjct: 219 IVWKVMEMCYKILGEGKLVTLRELFYTLLSESPTYFTCQRHVNQTVQDVVSLLRCTRQSL 278
Query: 209 NVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVGDM--QSDAMFILLVEK 265
++A+ +G ++GRL+ + +DC+ +G G AI +++ + + SDA +I++VEK
Sbjct: 279 GIMASSRGALIGRLVLQGPEEEHVDCSILGPSGHAITGDLNVLSKLIFSSDARYIIVVEK 338
Query: 266 DAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKI 324
DA + RLAEDR Y+ PCI++TAKG PD+ATR L ++ +P+ ALVD +P GL I
Sbjct: 339 DAIFQRLAEDRIYSHLPCILITAKGYPDLATRFILHRLSQTYPNMPIFALVDWNPAGLAI 398
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
L Y GS +M +S ++KWLG+R DL IP+ + +D++ K LL
Sbjct: 399 LCTYKYGSISMGLESYRYAC-NVKWLGLRGDDLQ--LIPQSAYQELKPRDLQIAKSLLSS 455
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
F++ EL LM++T ++AEI+AL S GF +L + Y+ K+ Q D++
Sbjct: 456 KFLQDKHR--AELTLMLETGKRAEIEALYSHGFDFLGK-YVARKIVQGDYI 503
>gi|389860616|ref|YP_006362856.1| DNA topoisomerase VI subunit A [Thermogladius cellulolyticus 1633]
gi|388525520|gb|AFK50718.1| DNA topoisomerase VI subunit A [Thermogladius cellulolyticus 1633]
Length = 430
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/393 (30%), Positives = 193/393 (49%), Gaps = 71/393 (18%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
+P R SN +Y + ++L R ++ RK T+ + S+I++ + N + T
Sbjct: 37 MPKRVLSNTIYDEKNKMLLLGPDVLRRSLIDVNEARKFMQTLLMASIIYEALVNNEYPTI 96
Query: 174 RDLFY----------TDVKL-----FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVV 218
RDL+Y D K+ + +Q +SD+V+ D+ + R + +++ EKG V
Sbjct: 97 RDLYYRGKHSIGYRDVDGKMVHENTWDEQKESDSVIRDLEVFMNVLREEMLILSKEKGKV 156
Query: 219 VGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFY 278
VG L+ D ID +KMG G +I P D V DA ++L+VEKDA + +L F+
Sbjct: 157 VGNLVIRSGDDTIDLSKMGHGAYSIEPTPDLVEFKDVDAEYVLVVEKDAVFQQLHRYGFW 216
Query: 279 NRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYD 338
++ I+VT+ GQPD ATR F+R++ ELKLPV L DSDPYG I SV+ GS +SY+
Sbjct: 217 RKYRAILVTSAGQPDRATRRFVRRLNEELKLPVYVLTDSDPYGFYIYSVFKIGSITLSYE 276
Query: 339 SANLTTPDIKWLGIRPSD----------LDKYK------------------IPEQCR--- 367
S L TP+ +++G+ +D LD+ K + E R
Sbjct: 277 SERLATPNARFIGVSMTDVFGDEVFRKVLDEVKEVGGFTRTTLGKLKKKPYLSESERRNY 336
Query: 368 -LPMTEQDIKTGKDLLEEDFVKK------------------------NPGWVEELNLMVK 402
+ ++D++ +L+ D K P WV EL + K
Sbjct: 337 VIKAKQRDVERAVELVGYDVADKCVESSELRSKLKKKEGLTGYPWFRTPDWVRELCIFFK 396
Query: 403 TKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
T K EI+A++S G ++L++ Y+P K++ DW+
Sbjct: 397 TLNKLEIEAMASKGLKFLADTYIPSKIEGGDWI 429
>gi|302806102|ref|XP_002984801.1| hypothetical protein SELMODRAFT_423971 [Selaginella moellendorffii]
gi|300147387|gb|EFJ14051.1| hypothetical protein SELMODRAFT_423971 [Selaginella moellendorffii]
Length = 354
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 182/316 (57%), Gaps = 13/316 (4%)
Query: 129 DRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDV----KLF 184
D I L + F ++++ K+L L +QL T+R++FY + + F
Sbjct: 43 DNIFLSHLDSTLSFTKSGSMKRYFRVWKMLELCYQLLTLGKKATQREIFYRLLCDASEYF 102
Query: 185 QDQTQSDAVLD-DVACILGCTRSSLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKA 242
Q Q Q + DV IL C+R SL ++A+ +G +VGRL+ + N + +DCTK+G+ G
Sbjct: 103 QCQEQKAKTMHADVVGILKCSRYSLGILASARGAIVGRLVIQELNREPVDCTKIGINGYI 162
Query: 243 IPPNIDRVGDMQ--SDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFL 300
I +++ + ++ SDA +IL++EKDA + RL+EDRF+ P I++TAKG PD+A+R+ L
Sbjct: 163 IDGDLELLQNLTLTSDARYILVIEKDAVFQRLSEDRFFQTIPSILITAKGYPDLASRVML 222
Query: 301 RKMKMELK-LPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDK 359
K+ LP+LALVD +P GL I+ Y GS M ++ + D+KWLG+ DL
Sbjct: 223 HKLHRSFPLLPILALVDWNPCGLGIICTYKFGSVGMGLEAPHYVC-DVKWLGVSSEDLP- 280
Query: 360 YKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQY 419
+IP + + ++ +D + K LL ++ +P + EEL M++ ++ EI+AL + G++
Sbjct: 281 -RIPPEYFVELSARDRQLAKGLLSSAMLQNHPRYREELERMIQAGKRVEIEALYAHGYKS 339
Query: 420 LSEVYLPLKLQQKDWL 435
LS Y+ K+ Q +
Sbjct: 340 LSS-YVAQKIVQMRYF 354
>gi|297742243|emb|CBI34392.3| unnamed protein product [Vitis vinifera]
Length = 381
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 183/308 (59%), Gaps = 18/308 (5%)
Query: 136 KTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFY----TDVKLFQDQTQSD 191
++ +RP A+ + VR K++ + Q+ ++ VT+R+LFY + + F Q Q +
Sbjct: 84 RSLMRPNAAKAFVR----VWKVVEMCFQILVQEKRVTQRELFYKLLCSSPQYFTCQLQVN 139
Query: 192 AVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDN-GDMIDCTKMGMGGKAIPPNIDRV 250
+ DV +L C+R SL ++A+ +G V GRL+ + +DC+ G G AI +++ +
Sbjct: 140 RTIQDVVALLRCSRYSLGIMASSRGAVTGRLLLQAFISETVDCSACGSSGHAISGDMNLL 199
Query: 251 GDM--QSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL- 307
M ++DA +I++VEK A + RLAEDR +N+ P I++TAKG PD+ATR L +M
Sbjct: 200 ERMVMKTDARYIIVVEKHAIFQRLAEDRVFNQIPSILITAKGYPDIATRFLLYRMSRAFP 259
Query: 308 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR 367
LP+LALVD +P GL IL + GS M ++ ++KWLG+R DL IPE+
Sbjct: 260 DLPILALVDWNPAGLAILCTFKFGSIGMGLEAYRYAC-NVKWLGLRGDDLQ--LIPEESL 316
Query: 368 LPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPL 427
+P+ +D++ K L + +++N + EL +MV++ ++AEI+AL G+ +L + Y+
Sbjct: 317 IPLKPRDLQIAKSLKSSEILEEN--YRNELEVMVQSGRRAEIEALYFRGYNFLGK-YIAK 373
Query: 428 KLQQKDWL 435
K+ Q +++
Sbjct: 374 KIVQANYV 381
>gi|195653947|gb|ACG46441.1| meiotic recombination protein SPO11 [Zea mays]
gi|223973125|gb|ACN30750.1| unknown [Zea mays]
Length = 382
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/301 (35%), Positives = 179/301 (59%), Gaps = 15/301 (4%)
Query: 144 SLSTVRKSTITV-KILSLIHQLCLRNIHVTKRDLFYTDV----KLFQDQTQSDAVLDDVA 198
SL+ K+ + V K++ + +++ V +R+LFY + K F Q + + DV
Sbjct: 88 SLTHNPKAFVRVWKVMEMCYKILGEGKLVQQRELFYKLLSDSPKYFSCQRHVNQAIQDVV 147
Query: 199 CILGCTRSSLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVGDMQSDA 257
+L CTR SL V+A+ +G ++GRL+ + +G+ IDC+ +G G AI +++ + + +
Sbjct: 148 SLLRCTRQSLGVMASSRGALIGRLVLHEPDGEQIDCSILGASGHAITGDLNLLSKLNLSS 207
Query: 258 M--FILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLAL 314
+I++VEKDA + RLAEDR YN+ PCI++TAKG PD+ATR L ++ +P+ AL
Sbjct: 208 GSRYIIVVEKDAVFQRLAEDRLYNQLPCILITAKGYPDIATRFILHRLSQTFPNMPIFAL 267
Query: 315 VDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQD 374
VD +P GL IL Y GS +M +S ++KWLG+R DL + IPE + +D
Sbjct: 268 VDWNPAGLAILCTYKYGSISMGLESYRYAC-NVKWLGVRGGDL--HLIPEDAFQELKPRD 324
Query: 375 IKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDW 434
++ K L+ F++++ EL LMV+ ++A+I+AL S GF +L + Y+ K+ Q D+
Sbjct: 325 LQIAKSLMSSKFLQESHR--AELALMVERGKRADIEALYSHGFDFLGK-YIARKIVQGDY 381
Query: 435 L 435
+
Sbjct: 382 I 382
>gi|238908556|gb|ACF79646.2| unknown [Zea mays]
Length = 353
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/301 (35%), Positives = 179/301 (59%), Gaps = 15/301 (4%)
Query: 144 SLSTVRKSTITV-KILSLIHQLCLRNIHVTKRDLFYTDV----KLFQDQTQSDAVLDDVA 198
SL+ K+ + V K++ + +++ V +R+LFY + K F Q + + DV
Sbjct: 59 SLTHNPKAFVRVWKVMEMCYKILGEGKLVQQRELFYKLLSDSPKYFSCQRHVNQAIQDVV 118
Query: 199 CILGCTRSSLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVGDMQSDA 257
+L CTR SL V+A+ +G ++GRL+ + +G+ IDC+ +G G AI +++ + + +
Sbjct: 119 SLLRCTRQSLGVMASSRGALIGRLVLHEPDGEQIDCSILGASGHAITGDLNLLSKLNLSS 178
Query: 258 M--FILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLAL 314
+I++VEKDA + RLAEDR YN+ PCI++TAKG PD+ATR L ++ +P+ AL
Sbjct: 179 GSRYIIVVEKDAVFQRLAEDRLYNQLPCILITAKGYPDIATRFILHRLSQTFPNMPIFAL 238
Query: 315 VDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQD 374
VD +P GL IL Y GS +M +S ++KWLG+R DL + IPE + +D
Sbjct: 239 VDWNPAGLAILCTYKYGSISMGLESYRYAC-NVKWLGVRGGDL--HLIPEDAFQELKPRD 295
Query: 375 IKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDW 434
++ K L+ F++++ EL LMV+ ++A+I+AL S GF +L + Y+ K+ Q D+
Sbjct: 296 LQIAKSLMSSKFLQESH--RAELALMVERGKRADIEALYSHGFDFLGK-YIARKIVQGDY 352
Query: 435 L 435
+
Sbjct: 353 I 353
>gi|53125146|emb|CAE53723.1| topoisomerase 6 subunit A [Oryza sativa Indica Group]
Length = 385
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 168/288 (58%), Gaps = 14/288 (4%)
Query: 156 KILSLIHQLCLRNIHVTKRDLFYTDVK----LFQDQTQSDAVLDDVACILGCTRSSLNVI 211
K++ + +++ VT R+LFYT + F Q + + DV +L CTR SL ++
Sbjct: 104 KVMEMCYKILGEGKLVTLRELFYTLLSESPTYFTCQRHVNQTVQDVVSLLRCTRQSLGIM 163
Query: 212 AAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVGDM--QSDAMFILLVEKDAA 268
A+ +G ++GRL+ + +DC+ +G G AI +++ + + SDA +I++VEKDA
Sbjct: 164 ASSRGALIGRLVLQGPEEEHVDCSILGPSGHAITGDLNVLSKLIFSSDARYIIVVEKDAI 223
Query: 269 YIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKILSV 327
+ RLAEDR Y+ PCI++TAKG PD+ATR L ++ +P+ ALVD +P GL IL
Sbjct: 224 FQRLAEDRIYSHLPCILITAKGYPDLATRFILHRLSQTYPNMPIFALVDWNPAGLAILCT 283
Query: 328 YGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFV 387
Y GS +M +S ++KWLG+R DL IP+ + +D++ K LL F+
Sbjct: 284 YKYGSISMGLESYRYAC-NVKWLGLRGDDLQ--LIPQSAYQELKPRDLQIAKSLLSSKFL 340
Query: 388 KKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+ EL LM++T ++AEI+AL S GF +L + Y+ K+ Q D++
Sbjct: 341 QDKHR--AELTLMLETGKRAEIEALYSHGFDFLGK-YVARKIVQGDYI 385
>gi|296089901|emb|CBI39720.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 165/323 (51%), Gaps = 55/323 (17%)
Query: 163 QLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT-----------------R 205
QL N H +KRD++Y +F DQ+ D ++D+ +L C+ R
Sbjct: 88 QLLQENRHGSKRDIYYMHPSVFSDQSVVDRAINDICILLQCSRHNLNVVSVGKGKNSKRR 147
Query: 206 SSLNVIAAE------------------------------------KGVVV-GRLIFSDNG 228
S+ + A E KG++V G L F + G
Sbjct: 148 SNKSHTAEEDRIKSKSKPKQALVRTKEGKIFPIKNTKIILLRPLSKGLLVMGWLRFLEAG 207
Query: 229 DMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTA 288
DC +P +++ V D+ S A +IL+VEK++ + RLA D+F N+ CI++T
Sbjct: 208 KKFDCINGPNTAYPVPVHVEEVKDIVSVAQYILVVEKESVFQRLANDKFCNKNRCIVITG 267
Query: 289 KGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIK 348
+G PD+ TR FLR + +L L V LVD DPYG IL+ Y GS M+YD+ L P+I+
Sbjct: 268 RGYPDIPTRRFLRLLVEKLHLHVYCLVDCDPYGFDILTTYRFGSMQMAYDAKFLRVPEIE 327
Query: 349 WLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKN-PGWVEELNLMVKTKQKA 407
WLG PSD +KY +PE C LP+T +D + + +L ++++ W EL LM++ K
Sbjct: 328 WLGAFPSDSEKYGLPEPCLLPLTAEDKRKTEAILHRCYLQQELLHWRLELELMLQRGVKF 387
Query: 408 EIQALSSFGFQYLSEVYLPLKLQ 430
EI+ALS +LSE Y+P K+Q
Sbjct: 388 EIEALSVHSLSFLSENYIPSKIQ 410
>gi|115474861|ref|NP_001061027.1| Os08g0156900 [Oryza sativa Japonica Group]
gi|37805855|dbj|BAC99506.1| putative SPO11 protein [Oryza sativa Japonica Group]
gi|113622996|dbj|BAF22941.1| Os08g0156900 [Oryza sativa Japonica Group]
gi|150371043|dbj|BAF65345.1| topoisomerase Spo11 [Oryza sativa Japonica Group]
Length = 385
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 168/288 (58%), Gaps = 14/288 (4%)
Query: 156 KILSLIHQLCLRNIHVTKRDLFYTDVK----LFQDQTQSDAVLDDVACILGCTRSSLNVI 211
K++ + +++ VT R+LFYT + F Q + + DV +L CTR SL ++
Sbjct: 104 KVMEMCYKILGEGKLVTLRELFYTLLSESPTYFTCQRHVNQTVQDVVSLLRCTRQSLGIM 163
Query: 212 AAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVGDM--QSDAMFILLVEKDAA 268
A+ +G ++GRL+ + +DC+ +G G AI +++ + + SDA +I++VEKDA
Sbjct: 164 ASSRGALIGRLVVQGPEEEHVDCSILGPSGHAITGDLNVLSKLIFSSDARYIIVVEKDAI 223
Query: 269 YIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKILSV 327
+ RLAEDR Y+ PCI++TAKG PD+ATR L ++ +P+ ALVD +P GL IL
Sbjct: 224 FQRLAEDRIYSHLPCILITAKGYPDLATRFILHRLSQTYPNMPIFALVDWNPAGLAILCT 283
Query: 328 YGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFV 387
Y GS +M +S ++KWLG+R DL IP+ + +D++ K LL F+
Sbjct: 284 YKYGSISMGLESYRYAC-NVKWLGLRGDDLQ--LIPQSAYQELKPRDLQIAKSLLSSKFL 340
Query: 388 KKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+ EL LM++T ++AEI+AL S GF +L + Y+ K+ Q D++
Sbjct: 341 QDKHR--AELTLMLETGKRAEIEALYSHGFDFLGK-YVARKIVQGDYI 385
>gi|126465878|ref|YP_001040987.1| DNA topoisomerase VI subunit A [Staphylothermus marinus F1]
gi|126014701|gb|ABN70079.1| Spo11/DNA topoisomerase VI, subunit A [Staphylothermus marinus F1]
Length = 434
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 197/409 (48%), Gaps = 73/409 (17%)
Query: 100 IARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILS 159
+A+ I+ G +P R SN +Y + ++L + R F ++ RK T+ + S
Sbjct: 25 LAKRIIEGKRPVIVMPKRILSNTIYDEKNKLLLLGPEMQRRSFLDVNEARKFMQTLLMAS 84
Query: 160 LIHQLCLRNIHVTKRDLFY---------------TDVKLFQDQTQSDAVLDDVACILGCT 204
+I++ N + T RDL+Y + +Q +SD+V+ D+ LG
Sbjct: 85 IIYEALANNEYPTIRDLYYRGKHTIIYRDLHGRTHHENTWDEQRESDSVIRDLEVYLGVL 144
Query: 205 RSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVE 264
R + +++ EKG VVG L+ D ID +KMG G +I P D + DA ++L+VE
Sbjct: 145 REEMLILSKEKGKVVGNLVIKSGDDTIDLSKMGHGAYSIEPTPDLIEFKDVDAEYVLVVE 204
Query: 265 KDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
KDA + +L F+ + I++T+ GQPD ATR F+R++ ELKLPV L D+DPYG I
Sbjct: 205 KDAVFQQLHRYGFWKKQKAILITSAGQPDRATRRFVRRLNEELKLPVYILADADPYGWYI 264
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQC----------------RL 368
SV+ GS +SY+S L TP K++G+ +D+ +I + +L
Sbjct: 265 YSVFKIGSITLSYESERLATPSAKFIGVTMTDVFGDEIIREKIKDLKSIKTISSSTLRKL 324
Query: 369 P-----MTEQ------------DIKTGKDLLEEDFVK----------------------- 388
P +TEQ DI+ +L+ D +
Sbjct: 325 PRKKPYLTEQERRNYIIKAKPKDIERAVELIGYDVAEACLENKELKSKIRRKKEGLAGYP 384
Query: 389 --KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+ P W+ EL + KT K EI+A++S G ++L++ Y+P K+ DW+
Sbjct: 385 WFRTPEWIRELCIFFKTLSKLEIEAMASKGLKFLADKYIPEKINVGDWI 433
>gi|37805856|dbj|BAC99507.1| putative SPO11 protein [Oryza sativa Japonica Group]
Length = 363
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 168/288 (58%), Gaps = 14/288 (4%)
Query: 156 KILSLIHQLCLRNIHVTKRDLFYTDVK----LFQDQTQSDAVLDDVACILGCTRSSLNVI 211
K++ + +++ VT R+LFYT + F Q + + DV +L CTR SL ++
Sbjct: 82 KVMEMCYKILGEGKLVTLRELFYTLLSESPTYFTCQRHVNQTVQDVVSLLRCTRQSLGIM 141
Query: 212 AAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVGDM--QSDAMFILLVEKDAA 268
A+ +G ++GRL+ + +DC+ +G G AI +++ + + SDA +I++VEKDA
Sbjct: 142 ASSRGALIGRLVVQGPEEEHVDCSILGPSGHAITGDLNVLSKLIFSSDARYIIVVEKDAI 201
Query: 269 YIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKILSV 327
+ RLAEDR Y+ PCI++TAKG PD+ATR L ++ +P+ ALVD +P GL IL
Sbjct: 202 FQRLAEDRIYSHLPCILITAKGYPDLATRFILHRLSQTYPNMPIFALVDWNPAGLAILCT 261
Query: 328 YGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFV 387
Y GS +M +S ++KWLG+R DL IP+ + +D++ K LL F+
Sbjct: 262 YKYGSISMGLESYRYAC-NVKWLGLRGDDLQ--LIPQSAYQELKPRDLQIAKSLLSSKFL 318
Query: 388 KKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+ EL LM++T ++AEI+AL S GF +L + Y+ K+ Q D++
Sbjct: 319 QDKHR--AELTLMLETGKRAEIEALYSHGFDFLGK-YVARKIVQGDYI 363
>gi|150401437|ref|YP_001325203.1| DNA topoisomerase VI subunit A [Methanococcus aeolicus Nankai-3]
gi|150014140|gb|ABR56591.1| DNA topoisomerase (ATP-hydrolyzing) [Methanococcus aeolicus
Nankai-3]
Length = 363
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 182/348 (52%), Gaps = 24/348 (6%)
Query: 104 ILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTI---TVKILSL 160
IL G + P R+ +N + E VL K R TV ++ I TVK++
Sbjct: 23 ILEGRRPKLKFPVRSLANARFDKEKGTFVLIGKEKERAL----TVNQAKIFAQTVKMMEF 78
Query: 161 IHQLCLRNIHVTKRDLFYTDVKL----FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKG 216
+L + N T R+ +Y F DQ S++V++D+ L R L I E G
Sbjct: 79 SKELLITNDFSTLREAYYVSKNWGEARFDDQQPSNSVIEDIEASLNFLREELGFIPEEDG 138
Query: 217 V-VVGRLIFSDNGDM-----IDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYI 270
VVG L D + IDC ++G G IP +I ++ + ++DA FIL +E +
Sbjct: 139 ASVVGPLKIVDKSEKNEELKIDCARLGSGAYNIPNDITKL-EFETDAEFILAIETAGMFA 197
Query: 271 RLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYG-LKILSVYG 329
RL ++F+ + CI+++ KG P ATR F +++ E LPVL D DPYG L I
Sbjct: 198 RLNAEKFWKKHNCILISLKGVPARATRQFTKRLNEEHNLPVLVFTDGDPYGYLNIYRTLK 257
Query: 330 CGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLE-EDFVK 388
GS + + L+ P + +G+ P D++ Y +P P+ + DIK KD L+ +DFVK
Sbjct: 258 VGSGKSVHLADKLSIPSARLIGVTPQDINDYDLPTH---PLKDHDIKRLKDGLKNDDFVK 314
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKD-WL 435
+P W + +N M+++K++AE Q+L+ +G +Y+ E YLP K++ K WL
Sbjct: 315 SHPEWQKAINHMIESKERAEQQSLAKYGLKYVVEEYLPAKIEDKSTWL 362
>gi|242080619|ref|XP_002445078.1| hypothetical protein SORBIDRAFT_07g003800 [Sorghum bicolor]
gi|241941428|gb|EES14573.1| hypothetical protein SORBIDRAFT_07g003800 [Sorghum bicolor]
Length = 384
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 170/288 (59%), Gaps = 14/288 (4%)
Query: 156 KILSLIHQLCLRNIHVTKRDLFYTDV----KLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
K++ + +++ V +R+LFY + K F Q + + DV +L CTR SL V+
Sbjct: 103 KVMEMCYKILGEGKLVHQRELFYKLLSDSPKYFSCQRHVNQAIQDVVSLLRCTRQSLGVM 162
Query: 212 AAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVGDMQS--DAMFILLVEKDAA 268
A+ +G ++GRL+ + + + IDC+ +G G AI +++ + + DA +I++VEKDA
Sbjct: 163 ASSRGALIGRLVLHEPDEEQIDCSILGASGHAITGDLNLLSKLNLSSDARYIIVVEKDAI 222
Query: 269 YIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKILSV 327
+ RLAEDR YN+ PCI++TAKG PD+ATR L ++ +P+ ALVD +P GL I+
Sbjct: 223 FQRLAEDRLYNQLPCILITAKGYPDIATRFILHRLSQTFPNMPIFALVDWNPAGLAIMCT 282
Query: 328 YGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFV 387
Y GS +M +S ++KWLG+R DL IPE + +D++T + L F
Sbjct: 283 YKYGSISMGLESYRYAC-NVKWLGMRGDDLQ--LIPESAFQVLKPRDLQTCTNYLRPQFH 339
Query: 388 KKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+++ EL LMV+ ++A+I+AL S GF YL + Y+ K+ Q D++
Sbjct: 340 QESHR--AELTLMVEKGKRADIEALYSHGFDYLGK-YIARKIVQGDYI 384
>gi|168053052|ref|XP_001778952.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669624|gb|EDQ56207.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 285
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 167/286 (58%), Gaps = 9/286 (3%)
Query: 156 KILSLIHQLCLRNIHVTKRDLFY----TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
K++ + +QL T+R++FY T Q Q ++ + D +L CTR SL ++
Sbjct: 3 KVMQICYQLLGIGKQATQREIFYNILSTSSSYITSQNQVNSAIQDAVAVLLCTRRSLGIL 62
Query: 212 AAEKGVVVGRLIFSDNG-DMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYI 270
A+ KG VVGRL+ ++G D +DC+ +G I +++ SDA +IL++EKDA +
Sbjct: 63 ASSKGAVVGRLVIKEHGGDTVDCSNLGSSSYPISADMNMKQHFYSDARYILVIEKDAIFQ 122
Query: 271 RLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKILSVYG 329
RL E+RF+ + PCII+TAKG PD+A+R L ++ E + + ALVD +P GL I+ Y
Sbjct: 123 RLVEERFFLKVPCIIMTAKGFPDLASRALLHRLHQEFPSMLIFALVDWNPAGLAIICTYR 182
Query: 330 CGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKK 389
GS M ++ D+KWLG+R D Y +P +T++D+ + LL ++
Sbjct: 183 FGSIRMGLEAPRYVC-DVKWLGLRNRDALTY-VPATAFTSLTDRDMTQARSLLASKMLQN 240
Query: 390 NPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+ + +E+ M+ QKAEI+AL + G+++L++ ++ K+ ++D++
Sbjct: 241 HKQYKQEILEMLTFGQKAEIEALYAHGYEFLAK-FITKKIVRQDFI 285
>gi|302808341|ref|XP_002985865.1| hypothetical protein SELMODRAFT_424927 [Selaginella moellendorffii]
gi|300146372|gb|EFJ13042.1| hypothetical protein SELMODRAFT_424927 [Selaginella moellendorffii]
Length = 354
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 181/316 (57%), Gaps = 13/316 (4%)
Query: 129 DRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDV----KLF 184
D I L + F ++++ K+L L +QL T+R++FY + + F
Sbjct: 43 DNIFLSHLDSTLSFTKSGSMKRYFRVWKMLELCYQLLTLGKKATQREIFYRLLCDASEYF 102
Query: 185 QDQTQSDAVLD-DVACILGCTRSSLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKA 242
Q Q Q + DV IL C+R SL ++A+ +G +VGRL+ + N + +DCTK+G+ G
Sbjct: 103 QCQEQKAKTMHADVVGILKCSRYSLGILASARGAIVGRLVIQELNREPVDCTKIGINGYI 162
Query: 243 IPPNIDRVGDMQ--SDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFL 300
I +++ + ++ SDA +IL++EKDA + RL+EDRF+ P I++TAKG PD+A+R+ L
Sbjct: 163 IDGDLELLQNLTLTSDARYILVIEKDAVFQRLSEDRFFQTIPSILITAKGYPDLASRVML 222
Query: 301 RKMKMELK-LPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDK 359
K+ LP+LALVD +P GL I+ Y GS M ++ + D+KWLG+ DL
Sbjct: 223 HKLHRSFPLLPILALVDWNPCGLGIICTYKFGSVGMGLEAPHYVC-DVKWLGVSSEDLP- 280
Query: 360 YKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQY 419
+I + + ++ +D + K L+ ++ +P + EEL M++ ++ EI+AL + G++
Sbjct: 281 -RITPEYFVELSARDRQLAKGLISSAMLQNHPRYREELERMIQAGKRVEIEALYAHGYKS 339
Query: 420 LSEVYLPLKLQQKDWL 435
LS Y+ K+ Q +
Sbjct: 340 LSG-YVAQKIVQMRYF 354
>gi|440791105|gb|ELR12359.1| topoisomerase Spo11, putative [Acanthamoeba castellanii str. Neff]
Length = 312
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 173/347 (49%), Gaps = 52/347 (14%)
Query: 93 IETLILQIARSILAGNG--FSFQVPSRASSNQL-YVPELDRIVLKDKTTLRPFASLSTVR 149
+E ++ ++ I+AG SF+ S + +V + R V + T S T++
Sbjct: 14 LEAVLQRVLADIVAGRNAKLSFEEHHSYKSIEFDFVTKCHRPVAEPSLTTLALRSNKTLK 73
Query: 150 KSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLN 209
+ ++I+ ++H+L L N H TKRD++Y DV LF+ Q D ++++A +L R++L+
Sbjct: 74 SFVVMLRIMEVVHELLLSNKHATKRDIYYMDVTLFEKQAIVDRAIENIASMLHVPRTALH 133
Query: 210 VIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAY 269
V+ EK +V G + + + GD IDC Y
Sbjct: 134 VVGTEKSLVAGHVNWKEKGDTIDCMH---------------------------------Y 160
Query: 270 IRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKILSVY 328
+ T KG PD+A R F+R +K L L VLAL D DP+GL+IL Y
Sbjct: 161 LH---------------TGKGVPDLAARRFVRMLKDTLPSLVVLALCDYDPWGLQILCTY 205
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVK 388
GS M+YD+ +L TP++ WLG+ DL K+++P C +T+ D + G+ +L ++
Sbjct: 206 AFGSLRMTYDAESLATPELLWLGVHDEDLKKWELPAACFANLTDVDKRKGETMLSMPALQ 265
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
P W +L M+ +K E+QALSS +L + +LP K+ + WL
Sbjct: 266 AKPTWRNQLKSMLAGGKKIEMQALSSISISFLCDTFLPDKMAKAQWL 312
>gi|449452446|ref|XP_004143970.1| PREDICTED: meiotic recombination protein SPO11-2-like [Cucumis
sativus]
Length = 384
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 182/308 (59%), Gaps = 18/308 (5%)
Query: 136 KTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDV----KLFQDQTQSD 191
++ +RP AS + VR K++ + Q+ +++ VT+R+LFY + F Q +
Sbjct: 87 RSLMRPNASKAFVR----VWKLMEMCSQILIQDKKVTQRELFYKLLCDSPVYFSTQLHVN 142
Query: 192 AVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIP--PNID 248
+ DV +L C+R SL ++A+ +G+V GRL+ + +++DCT G G I ++
Sbjct: 143 RTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEPEQEVVDCTACGSSGYPISGDLDLL 202
Query: 249 RVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKM-KMEL 307
+ +++DA +I+++EK A + RLA+DR +NR P I++TAKG PD+ATR FL K+ K
Sbjct: 203 QTLTLKTDARYIIVIEKHAIFQRLADDRVFNRIPSILITAKGYPDLATRYFLHKICKTFS 262
Query: 308 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR 367
LP+ LVD +P GL IL + GS M ++ ++KWLG+R DL IP++
Sbjct: 263 HLPMFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYAC-NVKWLGVRGDDLQ--LIPQESL 319
Query: 368 LPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPL 427
+P+ +D++ K LL +++N + +EL LMV+ QKAE++AL GF YL E Y+
Sbjct: 320 VPLKPRDLQIAKSLLSSKILQEN--YRQELTLMVERGQKAELEALYHNGFDYL-EKYIVK 376
Query: 428 KLQQKDWL 435
K+ Q ++
Sbjct: 377 KIIQFSYI 384
>gi|312136519|ref|YP_004003856.1| DNA topoisomerase [Methanothermus fervidus DSM 2088]
gi|311224238|gb|ADP77094.1| DNA topoisomerase (ATP-hydrolyzing) [Methanothermus fervidus DSM
2088]
Length = 353
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 175/325 (53%), Gaps = 10/325 (3%)
Query: 112 FQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHV 171
+VPSR++SN +Y VL DK +R ++ +RK + + + +L +
Sbjct: 31 IKVPSRSTSNIIYDDNKRHYVLGDKYGVRSLGNVKQLRKIGQMLYVANFCKELIKKGKTA 90
Query: 172 TKRDLFYT----DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
T R+++Y DV F DQ +S+ + +D+ +LG TR L ++ E G V G+L +
Sbjct: 91 TLREMYYVSEGWDVD-FNDQQESNNISEDLEIVLGVTREDLGLLPEEDGASVYGKLTVRE 149
Query: 227 NGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIV 286
ID K G G IPP +D + + D ++ VE Y RL +++ + +F C+IV
Sbjct: 150 GDIEIDAMKAGKSGYTIPPTVDEIEFVDHDVERVIAVETMGMYHRLVQEKAHKKFDCLIV 209
Query: 287 TAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPD 346
KGQ ATR FL+++ ELKLPV D DP+G I V GS +++ + L TP+
Sbjct: 210 GLKGQAARATRRFLKRLNEELKLPVYICNDGDPWGFHIAMVIISGSAKLAHVNHELATPN 269
Query: 347 IKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQK 406
K+LG+ +D+ Y +P P+ E DI K+LL D K+ W E+ M+K K+K
Sbjct: 270 AKFLGVTATDIINYDLPTD---PLEEVDIIRLKELL-RDPRYKDEFWRREIKKMLKIKKK 325
Query: 407 AEIQALSSFGFQYLSEVYLPLKLQQ 431
AE Q+ S +G +Y+ + YLP KL++
Sbjct: 326 AEQQSFSKYGLEYVVDTYLPEKLEE 350
>gi|357494931|ref|XP_003617754.1| Meiotic recombination protein SPO11 [Medicago truncatula]
gi|355519089|gb|AET00713.1| Meiotic recombination protein SPO11 [Medicago truncatula]
Length = 452
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 175/361 (48%), Gaps = 74/361 (20%)
Query: 146 STVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTR 205
+ VR+ + +++L ++ +L N H +KRD++Y +F DQ+ D ++D+ ++ C+R
Sbjct: 89 THVRRLDVMLRVLVIVQKLLQENKHSSKRDIYYMHPSVFLDQSVVDHAINDICVLMQCSR 148
Query: 206 SSLNVIAAEKGVVVGRLIFSDNG---DMIDCTKMGMGGKAIPPNI--------------D 248
+LNV++A G V+ +N D+ C K + + P + D
Sbjct: 149 HNLNVVSAGNGYVMRSHSIMENALFYDVYICIKQIIATHTVNPWLVMGWIRFVEGKKIFD 208
Query: 249 RVG----------------DMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQP 292
+ D+ S A +IL+VEK++ + RLA D+F CI+++ +G P
Sbjct: 209 CISSPDTCRELTLLYFLPIDIVSAARYILVVEKESVFQRLANDQFCKSNHCIVISGRGYP 268
Query: 293 DVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGS-------------------- 332
D+ TR FLR + L +P LVD DPYG IL+ Y GS
Sbjct: 269 DIPTRRFLRLLVENLHIPAYCLVDCDPYGFDILTTYRFGSMVSICKFISSEVLQHAYLLL 328
Query: 333 --------------------KNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTE 372
+ M+YD+ +L P+I WLG PSD ++Y +P+QC LP+T
Sbjct: 329 QGSQHEVYMIVEWIKSLSNDRQMAYDTKHLRVPEIHWLGAFPSDSERYFVPKQCLLPLTA 388
Query: 373 QDIKTGKDLLEEDFVKKN-PGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+D + + +L ++++ P W EL +M++ K EI+ALS +L+E Y+P K+
Sbjct: 389 EDKRKIEAMLLRCYLQREVPQWRLELKMMLQKGVKFEIEALSVHTLSFLTESYIPSKIHG 448
Query: 432 K 432
K
Sbjct: 449 K 449
>gi|18977950|ref|NP_579307.1| DNA topoisomerase VI subunit A [Pyrococcus furiosus DSM 3638]
gi|397652071|ref|YP_006492652.1| DNA topoisomerase VI subunit A [Pyrococcus furiosus COM1]
gi|22654150|sp|Q8U0K9.1|TOP6A_PYRFU RecName: Full=Type II DNA topoisomerase VI subunit A
gi|18893722|gb|AAL81702.1| type II DNA topoisomerase subunit a [Pyrococcus furiosus DSM 3638]
gi|393189662|gb|AFN04360.1| DNA topoisomerase VI subunit A [Pyrococcus furiosus COM1]
Length = 382
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 188/359 (52%), Gaps = 16/359 (4%)
Query: 89 VQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTV 148
V +E L +I + AG F VP+R SN + E I L DK + R F +++
Sbjct: 19 VLKKLEDLAYKILEEVKAGKNPYFDVPTRGLSNVYFDEEARLIKLGDKLSRRYFLNVAHA 78
Query: 149 RKSTITVKILSLIHQLCLRNIHVTKRDLFY--------TDVKLFQDQTQSDAVLDDVACI 200
RK T+ +++ + +L H + R+ +Y T F+DQ++SD +++D+ +
Sbjct: 79 RKFMQTLILMAYVKRLVSEGKHASLREAYYANKHTIPGTHENTFEDQSESDPIIEDLERM 138
Query: 201 LGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFI 260
LG R +++ A +G V G ++ D D + +K+GMGG A+P ++ + + + ++
Sbjct: 139 LGVLREEMHITADRRGYVYGDIVIKDGEDEFNASKLGMGGWAVPGTVEHIQFPEINVDYV 198
Query: 261 LLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
L+VE A RL E+++ R +I+ +GQ R + ++ E LP++ D DPY
Sbjct: 199 LVVETAAMADRLIEEKYPKRERALIIATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDPY 258
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY---KIPEQCR-LPMTEQDIK 376
G I S GS N++Y S L TPD K++G+ D+ +Y + E+ + +P ++
Sbjct: 259 GWYIYSTIKQGSINLAYLSEKLATPDAKFVGMTMDDIKEYGLEHVTEKLKGIPPDKKGGP 318
Query: 377 TG--KDLLEEDFVK--KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
TG K L+EE +N W +L L +K + E QAL++ +++++ YLP K+++
Sbjct: 319 TGDYKRLIEELNYPWFQNKEWQRQLKLALKWGVRIEQQALANKSLEFVAKEYLPEKIRE 377
>gi|256811385|ref|YP_003128754.1| DNA topoisomerase VI subunit A [Methanocaldococcus fervens AG86]
gi|256794585|gb|ACV25254.1| DNA topoisomerase (ATP-hydrolyzing) [Methanocaldococcus fervens
AG86]
Length = 369
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/378 (32%), Positives = 194/378 (51%), Gaps = 30/378 (7%)
Query: 73 SLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIV 132
++S RE+ A Q IE L ++ ++ G +P R+ SN ++ E
Sbjct: 6 AISKKPREI------AKQKIIE-LAKKMYEDLMKGKRPKITMPIRSLSNAMFDKEKGSFT 58
Query: 133 LKDKTTLRPFASLSTVRKSTI---TVKILSLIHQLCLRNIHVTKRDLFYTDVKL----FQ 185
L K R TV ++ I T K+L QL N T R+ +Y F
Sbjct: 59 LVGKEKARTL----TVNQAKIFAQTTKMLEFAKQLLETNDFSTLREAYYVSKNWGEARFD 114
Query: 186 DQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIF---SDNGDMI-DCTKMGMGG 240
DQ S+ V++D+ LG R L I E G VVG L + G+++ DCTK+G G
Sbjct: 115 DQQASNNVIEDLEAALGVLREHLGFIPEEDGSSVVGPLKIIEETPEGELVVDCTKLGTGA 174
Query: 241 KAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFL 300
IP ++ ++ ++++DA F+L +E + RL +RF+++ CI+V+ KG P ATR F+
Sbjct: 175 YNIPNDVTKL-NLETDADFVLAIETSGMFARLNAERFWDKHNCILVSLKGVPARATRRFI 233
Query: 301 RKMKMELKLPVLALVDSDPYG-LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDK 359
+++ E +LPVL D DPYG L I GS + + L+ P + +G+ P D+
Sbjct: 234 KRLYEEHELPVLVFTDGDPYGYLNIYRTLKVGSGKAIHLADKLSIPAARLIGVTPQDIVD 293
Query: 360 YKIPEQCRLPMTEQDIKTGKDLLE-EDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQ 418
Y +P P+ EQDIK KD L+ +DFV+ P W + L M+ +AE Q+L+ +G +
Sbjct: 294 YDLPTH---PLKEQDIKRIKDGLKNDDFVRSFPEWQKALKQMLDMGVRAEQQSLAKYGLK 350
Query: 419 YLSEVYLPLKLQ-QKDWL 435
Y+ + YLP K++ + WL
Sbjct: 351 YVVDTYLPEKIKDESTWL 368
>gi|14520811|ref|NP_126286.1| DNA topoisomerase VI subunit A [Pyrococcus abyssi GE5]
gi|13124622|sp|Q9V134.1|TOP6A_PYRAB RecName: Full=Type II DNA topoisomerase VI subunit A
gi|5458027|emb|CAB49517.1| Top6A DNA topoisomerase VI, subunit A [Pyrococcus abyssi GE5]
gi|380741353|tpe|CCE69987.1| TPA: DNA topoisomerase VI subunit A [Pyrococcus abyssi GE5]
Length = 382
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 189/359 (52%), Gaps = 16/359 (4%)
Query: 89 VQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTV 148
V +E L +I + +G F VP+R +N + E I L DK + R F +++
Sbjct: 19 VLKKLEDLAWKILEEVKSGKNPYFDVPTRGLNNVYFDEEARLIKLGDKLSRRYFLNVAHA 78
Query: 149 RKSTITVKILSLIHQLCLRNIHVTKRDLFY--------TDVKLFQDQTQSDAVLDDVACI 200
RK T T+ +++ I +L H + R+ +Y T F+DQ++SD +++D+ +
Sbjct: 79 RKFTQTLILMAYIKRLVSEGKHASLREAYYANKHTIPGTRENTFEDQSESDPIIEDLERM 138
Query: 201 LGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFI 260
LG R +++ A +G + G ++ D D + +K+G GG A+P ++ + + + ++
Sbjct: 139 LGVLREEMHITADRRGYIYGDIVIKDGEDEFNASKLGTGGWAVPGTVEHIQFPEVNVDYV 198
Query: 261 LLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
L+VE A RL E+++ + C+IV +GQ R + ++ E LP++ D DPY
Sbjct: 199 LVVETAAMADRLIEEKYPKKENCLIVATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDPY 258
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY---KIPEQCR-LPMTEQDIK 376
G I S GS N++Y S L TPD K++G+ D+ +Y + E+ + +P ++
Sbjct: 259 GWYIYSTIKQGSINLAYLSEKLATPDAKFVGMTMDDIKEYNLEHVTEKLKGIPPDKKGGP 318
Query: 377 TG--KDLLEEDFVK--KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
TG K L+EE +N W +L L +K + E QAL++ +++++ YLP K+++
Sbjct: 319 TGDYKRLIEELNYPWFQNKEWQRQLKLALKWGVRIEQQALANKSLEFVAKEYLPEKIRE 377
>gi|167042185|gb|ABZ06918.1| putative Type IIB DNA topoisomerase [uncultured marine
crenarchaeote HF4000_ANIW93H17]
gi|167044315|gb|ABZ08994.1| putative Type IIB DNA topoisomerase [uncultured marine
crenarchaeote HF4000_APKG6B14]
Length = 365
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 183/352 (51%), Gaps = 16/352 (4%)
Query: 90 QSTIETLI----LQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASL 145
QST+ L+ QI + GN F +PSR+ SN +Y ++ + +L T +R +
Sbjct: 14 QSTLADLLRKHGAQIYDDLDKGNFPKFSIPSRSVSNIVYDKKIRQYILGANTAVRSSRNS 73
Query: 146 STVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKL---FQDQTQSDAVLDDVACILG 202
S +R T + + ++L + T RD++Y+ F+DQ +SD ++ D+ +L
Sbjct: 74 SQLRSFTQLMWLAFFANRLTGQKKSSTLRDVYYSSQAFEVDFEDQAESDNIIVDLEAVLA 133
Query: 203 CTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMG----GKAIPPNIDRVGDMQSDAM 258
R S +V E+ V G L K + G AI P++ +++ A
Sbjct: 134 SPRESFHVFPEERSSVFGDLTIEYTVPGYQGKKTNLSDHPDGYAIGPSLTTAELIETSAE 193
Query: 259 FILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSD 318
++ VEK + R E++ +F IIV GQ +TR L+++ EL LPV+ L D D
Sbjct: 194 VVIAVEKGGLFTRFVEEQVDKKFKAIIVDTGGQAPRSTRTLLKRLHDELSLPVVILTDGD 253
Query: 319 PYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTG 378
YG I V GS N ++ LT PD KW+G+ +D++KYK+P +PMTE DIK
Sbjct: 254 VYGEHIAMVIKSGSANAAH-LRGLTVPDAKWVGVWATDIEKYKLPT---IPMTESDIKRC 309
Query: 379 KDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
DLL++ ++ W +EL + +K K+KAE++A S +G +++ YLP KL+
Sbjct: 310 HDLLKDPRYQEGI-WKKELEVFLKIKRKAELEAFSKYGLTNITDKYLPHKLE 360
>gi|408405571|ref|YP_006863554.1| type 2 DNA topoisomerase 6, subunit A [Candidatus Nitrososphaera
gargensis Ga9.2]
gi|408366167|gb|AFU59897.1| type 2 DNA topoisomerase 6, subunit A [Candidatus Nitrososphaera
gargensis Ga9.2]
Length = 368
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 185/365 (50%), Gaps = 19/365 (5%)
Query: 82 TDLSLSAVQSTIETLILQIARSILAGNGFS-FQVPSRASSNQLYVPELDRIVLKDKTTLR 140
TD V I+T++ ++ ++ VP N ++ E + + DKT
Sbjct: 4 TDKRHQEVIKKIKTIMKDVSTDLMVQKMMPVLNVPKVGYDNTVWSDEKRMLTIGDKTVGI 63
Query: 141 PFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDV----------KLFQDQTQS 190
S + T + + + + +L + T R ++Y + K + Q S
Sbjct: 64 SPDSTKKIPTFTQYLVMANAVRKLLDEEMESTIRGMYYATLSTVGDEKNKQKFWTGQEDS 123
Query: 191 DAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKA----IPPN 246
D + + + G R +V + KG++ G + GD+IDC +G +A IP N
Sbjct: 124 DDAIKAIELLTGVPREEFSVTSKPKGMISGPITLRVGGDVIDCN---LGSRATSQLIPTN 180
Query: 247 IDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKME 306
I V ++ A F+++VEKD + + F ++ I++T G+PD ATR+ ++ + E
Sbjct: 181 IRDVEIVKVKADFVMVVEKDTVLNNIRKSGFIQKYNAILMTGSGEPDRATRMMVKALNEE 240
Query: 307 LKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQC 366
K PV+ D+DP+GL I Y GS+++SYDS L TPD K LG+ SD+ +Y IPE
Sbjct: 241 WKKPVVVFADADPWGLGIALRYKIGSESLSYDSDRLVTPDAKVLGMMFSDIYEYNIPEVA 300
Query: 367 RLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLP 426
RL ++ D+ D+ ++ + ++ W +EL+L +K K+K E+ A GF+YL+EVYLP
Sbjct: 301 RLAASDDDLNRANDMKKKPWF-QDKQWQKELDLFLKKKEKCELDAFFKHGFKYLAEVYLP 359
Query: 427 LKLQQ 431
KL++
Sbjct: 360 RKLRE 364
>gi|222639941|gb|EEE68073.1| hypothetical protein OsJ_26101 [Oryza sativa Japonica Group]
Length = 420
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 96/250 (38%), Positives = 151/250 (60%), Gaps = 10/250 (4%)
Query: 190 SDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNID 248
+ A + DV +L CTR SL ++A+ +G ++GRL+ + +DC+ +G G AI +++
Sbjct: 177 AKAFVRDVVSLLRCTRQSLGIMASSRGALIGRLVVQGPEEEHVDCSILGPSGHAITGDLN 236
Query: 249 RVGDM--QSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKME 306
+ + SDA +I++VEKDA + RLAEDR Y+ PCI++TAKG PD+ATR L ++
Sbjct: 237 VLSKLIFSSDARYIIVVEKDAIFQRLAEDRIYSHLPCILITAKGYPDLATRFILHRLSQT 296
Query: 307 L-KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQ 365
+P+ ALVD +P GL IL Y GS +M +S ++KWLG+R DL IP+
Sbjct: 297 YPNMPIFALVDWNPAGLAILCTYKYGSISMGLESYRYAC-NVKWLGLRGDDLQ--LIPQS 353
Query: 366 CRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYL 425
+ +D++ K LL F++ EL LM++T ++AEI+AL S GF +L + Y+
Sbjct: 354 AYQELKPRDLQIAKSLLSSKFLQDKH--RAELTLMLETGKRAEIEALYSHGFDFLGK-YV 410
Query: 426 PLKLQQKDWL 435
K+ Q D++
Sbjct: 411 ARKIVQGDYI 420
>gi|374636729|ref|ZP_09708283.1| DNA topoisomerase (ATP-hydrolyzing) [Methanotorris formicicus
Mc-S-70]
gi|373558021|gb|EHP84388.1| DNA topoisomerase (ATP-hydrolyzing) [Methanotorris formicicus
Mc-S-70]
Length = 365
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 119/356 (33%), Positives = 185/356 (51%), Gaps = 22/356 (6%)
Query: 97 ILQIA----RSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKST 152
IL++A +L G ++P R+ +N + E +L K R ++S +
Sbjct: 14 ILELANKMYEDLLKGKRPKIKLPIRSLTNAKFDSETGTFILMGKEKERTL-TVSQAKIFA 72
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVKL----FQDQTQSDAVLDDVACILGCTRSSL 208
TVK+L QL N T R+ +Y F DQ S+ V++D+ L R L
Sbjct: 73 QTVKMLEFSKQLLDSNDFSTLREAYYVSKNWGEARFDDQQPSNNVIEDLEAALDVLREDL 132
Query: 209 NVIAAEKGV-VVGRLIFSD---NGDMI--DCTKMGMGGKAIPPNIDRVGDMQSDAMFILL 262
I E G VVG L D G+ I DCT++G G IP ++ R+ + +++A FIL
Sbjct: 133 GFIPEEDGSSVVGPLRIIDRTPEGEEIKVDCTRLGTGAYNIPNDVTRL-EFETNADFILA 191
Query: 263 VEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYG- 321
+E + RL ++F+++ CI+V+ KG P ATR F++++ E ++PVL D DPYG
Sbjct: 192 IETAGMFARLNAEKFWDKHNCILVSLKGVPARATRRFVKRLNEEYEVPVLVFTDGDPYGY 251
Query: 322 LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDL 381
L I GS + + L P + +G+ P D+ Y +P P+ EQDIK KD
Sbjct: 252 LNIYRTLKVGSGKAVHLADKLAIPSARLIGVTPQDIVDYDLPTH---PLKEQDIKRIKDG 308
Query: 382 LE-EDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ-QKDWL 435
L+ +DFVK P W + L M+ K +AE Q+L+ +G +Y+ + YLP K++ +K WL
Sbjct: 309 LKNDDFVKSFPEWQKALKQMLDMKVRAEQQSLAKYGLKYVVDTYLPEKIKDEKTWL 364
>gi|242018089|ref|XP_002429514.1| Meiotic recombination protein SPO11, putative [Pediculus humanus
corporis]
gi|212514456|gb|EEB16776.1| Meiotic recombination protein SPO11, putative [Pediculus humanus
corporis]
Length = 380
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 98/280 (35%), Positives = 165/280 (58%), Gaps = 7/280 (2%)
Query: 157 ILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKG 216
+LS IH+L T+R+L+Y ++K F+ Q D + D++ IL L V+A KG
Sbjct: 105 LLSKIHKLLTTGQVSTRRELYYKNLKNFKSQRDVDIAIKDISYILNAPPWELGVLATSKG 164
Query: 217 VVVGRLIFS-DNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAED 275
+V G L+ NG +++C G ++P N+ V ++ S A ++L++EKDA++ L +
Sbjct: 165 MVSGPLLLHLKNGQVLNCNIKE--GVSVPINVSDVENLTSTAKWMLIIEKDASFQTLLDS 222
Query: 276 RFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKN 334
+ CI++T KG PDV TR+ + K+ +L++P+LAL D+DPYG +I+ VY GS +
Sbjct: 223 SAVEKLDSCILITGKGFPDVNTRMLVCKVWQKLQIPILALCDADPYGFEIMCVYRFGSVS 282
Query: 335 MSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWV 394
MS + +L P I+WLGI P+D+ + Q ++ DIK K+ + +V+KN +
Sbjct: 283 MSNLADSLACPSIRWLGIHPNDIKPLLLNSQ---TLSANDIKKIKNAMNRSYVQKNFNLI 339
Query: 395 EELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDW 434
+L +K +KAEI+ +S+ +L +VYL K+Q K++
Sbjct: 340 NQLQTFLKENRKAEIEEISNISPNFLIDVYLKNKIQCKEY 379
>gi|333910721|ref|YP_004484454.1| Type 2 DNA topoisomerase 6 subunit A [Methanotorris igneus Kol 5]
gi|333751310|gb|AEF96389.1| Type 2 DNA topoisomerase 6 subunit A [Methanotorris igneus Kol 5]
Length = 365
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 122/359 (33%), Positives = 185/359 (51%), Gaps = 28/359 (7%)
Query: 97 ILQIA----RSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKST 152
IL++A +L G ++P R+ +N + E +L K R TV ++
Sbjct: 14 ILELANKMYEDLLKGKRPKIKLPIRSLTNARFDSETGTFMLMGKEKERTL----TVNQAK 69
Query: 153 I---TVKILSLIHQLCLRNIHVTKRDLFYTDVKL----FQDQTQSDAVLDDVACILGCTR 205
I TVK+L QL N T R+ +Y F DQ S+ V++D+ L R
Sbjct: 70 IFAQTVKMLEFSKQLLDSNDFSTLREAYYVSKNWGEARFDDQQPSNNVIEDLEAALDVLR 129
Query: 206 SSLNVIAAEKG-VVVGRLIFSD---NGDMI--DCTKMGMGGKAIPPNIDRVGDMQSDAMF 259
L I E G VVG L D G+ I DCTK+G G IP ++ R+ + +++A F
Sbjct: 130 EDLGFIPEEDGSAVVGPLKIIDRTPEGEEIKVDCTKLGTGAYNIPNDVTRL-EFETNADF 188
Query: 260 ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDP 319
IL +E + RL ++F+++ CI+V+ KG P ATR F++++ E +PVL D DP
Sbjct: 189 ILAIETAGMFARLNAEKFWDKHNCILVSLKGVPARATRRFIKRLNEEHDIPVLVFTDGDP 248
Query: 320 YG-LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTG 378
YG L I GS + + L P + +G+ P D+ Y +P P+ EQDIK
Sbjct: 249 YGYLNIYRTLKVGSGKAVHLADKLAVPSARLIGVTPQDIIDYDLPTH---PLKEQDIKRI 305
Query: 379 KDLLE-EDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ-QKDWL 435
KD L+ +DFVK P W + L M+ K +AE Q+L+ +G +Y+ + YLP K++ +K WL
Sbjct: 306 KDGLKNDDFVKSFPEWQKALKQMLDMKVRAEQQSLAKYGLKYVVDTYLPEKIKDEKTWL 364
>gi|359417697|ref|ZP_09209781.1| DNA topoisomerase VI subunit A [Candidatus Haloredivivus sp. G17]
gi|358031946|gb|EHK00766.1| DNA topoisomerase VI subunit A [Candidatus Haloredivivus sp. G17]
Length = 376
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 174/344 (50%), Gaps = 21/344 (6%)
Query: 110 FSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNI 169
+F+ R+ SN Y E R+ L D + R F ++S RK T + S +L
Sbjct: 35 LTFETQVRSKSNVEYDEEDGRLSLGDSYSTRKFLNISHARKFMQTTLVASKAKELVDSGR 94
Query: 170 HVTKRDLFYT--------DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGR 221
+ R+++Y D F+DQ +S+ V+ D+ G R L++ A KG + G
Sbjct: 95 TASIREVYYQLKHSVPGLDENTFEDQDESNNVVVDIETATGAIREDLHLFAEPKGRLFGP 154
Query: 222 LIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
+ +D+GD ID MG G AIP +D + +++A FIL+VE A RL E+ F+
Sbjct: 155 IKINDSGDTIDGMSMGSAGMAIPSIVDHLEFEENNADFILVVETSAMVNRLVEEDFHEEH 214
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
II+ GQP R + M EL+LPV D DP+G I SV GS ++++ S
Sbjct: 215 NAIIIGTGGQPARGARRLINMMHNELELPVYVFTDGDPWGYYIYSVLKSGSMSLAFQSDR 274
Query: 342 LTTPDIKWLGIRPSDLDKYKI----------PEQCRLPMTEQDIKTGKDLLEEDFVKKNP 391
L TPD K +G+ D+++Y + PE P +D K D+++ ++++K
Sbjct: 275 LATPDAKLIGMTMEDIEEYGLEHVTEDLKGKPEDSGGPT--KDYKRIHDVMDYEWMQKKE 332
Query: 392 GWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
W ++L LM+ + E QAL++ ++++ YLP K++ + +L
Sbjct: 333 -WQKQLELMLDKGVRVEQQALAANSLEFVANEYLPEKIENETFL 375
>gi|115489640|ref|NP_001067307.1| Os12g0622500 [Oryza sativa Japonica Group]
gi|108862984|gb|ABA99412.2| Type IIB DNA topoisomerase family protein, expressed [Oryza sativa
Japonica Group]
gi|113649814|dbj|BAF30326.1| Os12g0622500 [Oryza sativa Japonica Group]
gi|125537460|gb|EAY83948.1| hypothetical protein OsI_39169 [Oryza sativa Indica Group]
gi|125580120|gb|EAZ21266.1| hypothetical protein OsJ_36918 [Oryza sativa Japonica Group]
gi|150371047|dbj|BAF65347.1| topoisomerase Spo11 [Oryza sativa Japonica Group]
gi|215715276|dbj|BAG95027.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 487
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 178/351 (50%), Gaps = 15/351 (4%)
Query: 83 DLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLK-DKTTLRP 141
D S + T+ L+ +I G+G+ F +P + + N + E+ + K KT R
Sbjct: 118 DKSRVEARKTLNRLLEGNINTIERGHGYKFNIP-KYTDNMEFNEEVKVSLAKAGKTISRS 176
Query: 142 FASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACIL 201
F + + ++ T + LI + ++++KR + YT+ LF DQ++SD ++D+ +
Sbjct: 177 FCNANQREVASRTGYTIDLIERTLGAGLNISKRTVLYTNKDLFGDQSKSDQAINDICALT 236
Query: 202 GCTRSSLNVIAAEKGVVVGRLIFS-DNGDMIDCTKMGMGGKAIPPNIDRVGDM-----QS 255
R SL +IAAEKG+VVG + NG I C+ G IP +D++ D+
Sbjct: 237 NIRRGSLGIIAAEKGIVVGNIFLELTNGKSISCSI----GVQIPHRLDQIKDVCVEIGSR 292
Query: 256 DAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 315
+ +IL+VEK L E ++ CII+T G P + TR FLR +K LPV L
Sbjct: 293 NIEYILVVEKHTMLNYLLEMDYHTNNNCIILTGCGMPTLQTRDFLRFLKQRTGLPVFGLC 352
Query: 316 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 375
D DP G+ IL+ Y GS N +YD+ N++ P I W+G+ SD+ K + E ++ +D
Sbjct: 353 DPDPEGISILATYARGSCNSAYDNFNISVPSICWVGLSSSDMIKLNLSETNYSRLSREDK 412
Query: 376 KTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLP 426
K+L ++D W + M+ +KA +A+ S GF Y + LP
Sbjct: 413 TMLKNLWQDDLSDV---WKRRIEEMISFDKKASFEAIHSLGFDYFATNLLP 460
>gi|376372946|gb|ACZ58078.2| topoisomerase 6 subunit A [Oryza sativa Japonica Group]
Length = 487
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 178/351 (50%), Gaps = 15/351 (4%)
Query: 83 DLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLK-DKTTLRP 141
D S + T+ L+ +I G+G+ F +P + + N + E+ + K KT R
Sbjct: 118 DKSRVEARKTLNRLLEGNINTIERGHGYKFNIP-KYTDNMEFNEEVKVSLAKAGKTISRS 176
Query: 142 FASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACIL 201
F + + ++ T + LI + ++++KR + YT+ LF DQ++SD ++D+ +
Sbjct: 177 FCNANQREVASRTGYTIDLIERTLGAGLNISKRTVLYTNKDLFGDQSKSDQAINDICALT 236
Query: 202 GCTRSSLNVIAAEKGVVVGRLIFS-DNGDMIDCTKMGMGGKAIPPNIDRVGDM-----QS 255
R SL +IAAEKG+VVG + NG I C+ G IP +D++ D+
Sbjct: 237 NIRRGSLGIIAAEKGIVVGNIFLELTNGKSISCSI----GVQIPHRLDQIKDVCVEIGSR 292
Query: 256 DAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 315
+ +IL+VEK L E ++ CII+T G P + TR FLR +K LPV L
Sbjct: 293 NIEYILVVEKHTMLNYLLEMDYHTNNNCIILTGCGMPTLQTRDFLRFLKQRTGLPVFGLC 352
Query: 316 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 375
D DP G+ IL+ Y GS N +YD+ N++ P I W+G+ SD+ K + E ++ +D
Sbjct: 353 DPDPEGISILATYARGSCNSAYDNFNISVPSICWVGLSSSDMIKLNLSETNYSRLSREDK 412
Query: 376 KTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLP 426
K+L ++D W + M+ +KA +A+ S GF Y + LP
Sbjct: 413 TMLKNLWQDDLSDV---WKRRIEEMISFDKKASFEAIHSLGFDYFATNLLP 460
>gi|15668545|ref|NP_247343.1| DNA topoisomerase VI subunit A [Methanocaldococcus jannaschii DSM
2661]
gi|2495937|sp|Q57815.1|TOP6A_METJA RecName: Full=Type II DNA topoisomerase VI subunit A
gi|1591076|gb|AAB98358.1| DNA topoisomerase VI, subunit A (top6A) [Methanocaldococcus
jannaschii DSM 2661]
Length = 369
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/378 (32%), Positives = 192/378 (50%), Gaps = 30/378 (7%)
Query: 73 SLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIV 132
++S RE+ A Q IE L ++ ++ G +P R+ SN ++ E
Sbjct: 6 AISKKPREI------AKQKIIE-LAKKMYEDLMKGKRPKITMPIRSLSNAMFDKEKGSFT 58
Query: 133 LKDKTTLRPFASLSTVRKSTI---TVKILSLIHQLCLRNIHVTKRDLFYTDVKL----FQ 185
L K R TV ++ I T K+L QL + T R+ +Y F
Sbjct: 59 LVGKEKARTL----TVNQAKIFAQTTKMLEFAKQLLETDDFSTLREAYYVSKNWGEARFD 114
Query: 186 DQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIF---SDNGDMI-DCTKMGMGG 240
DQ S+ V++D+ LG R L I E G VVG L + G+++ DCTK+G G
Sbjct: 115 DQQASNNVIEDLEAALGVLREHLGFIPEEDGSSVVGPLKIIEETPEGELVVDCTKLGTGA 174
Query: 241 KAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFL 300
IP ++ ++ ++++DA FIL +E + RL +RF+++ CI+V+ KG P ATR F+
Sbjct: 175 YNIPNDVTKL-NLETDADFILAIETSGMFARLNAERFWDKHNCILVSLKGVPARATRRFI 233
Query: 301 RKMKMELKLPVLALVDSDPYG-LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDK 359
+++ E LPVL D DPYG L I GS + + L+ P + +G+ P D+
Sbjct: 234 KRLHEEHDLPVLVFTDGDPYGYLNIYRTLKVGSGKAIHLADKLSIPAARLIGVTPQDIID 293
Query: 360 YKIPEQCRLPMTEQDIKTGKDLLE-EDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQ 418
Y +P P+ EQDIK KD L+ +DFV+ P W + L M+ +AE Q+L+ +G +
Sbjct: 294 YDLPTH---PLKEQDIKRIKDGLKNDDFVRSFPEWQKALKQMLDMGVRAEQQSLAKYGLK 350
Query: 419 YLSEVYLPLKLQ-QKDWL 435
Y+ YLP K++ + WL
Sbjct: 351 YVVNTYLPEKIKDESTWL 368
>gi|332157795|ref|YP_004423074.1| DNA topoisomerase VI subunit A [Pyrococcus sp. NA2]
gi|331033258|gb|AEC51070.1| DNA topoisomerase VI subunit A [Pyrococcus sp. NA2]
Length = 380
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 189/359 (52%), Gaps = 16/359 (4%)
Query: 89 VQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTV 148
V +E L ++I + AG F VP+R +N + E I L D+ + R F +++
Sbjct: 17 VLKKLEDLAMRILEDVKAGKNPYFDVPTRGLNNVYFDEESRLIKLGDRLSKRYFLNVAHA 76
Query: 149 RKSTITVKILSLIHQLCLRNIHVTKRDLFY--------TDVKLFQDQTQSDAVLDDVACI 200
RK T+ +++ I +L H + R+ +Y T F+DQ++SD +++D+ +
Sbjct: 77 RKFMQTLILMAYIKRLVSEGKHASLREAYYANKHTIPGTKENTFEDQSESDPIIEDLERM 136
Query: 201 LGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFI 260
LG R +++ A +G + G ++ D D + +K+G GG A+P ++ + + + ++
Sbjct: 137 LGVLREEMHITADRRGYIYGDIVIKDGEDEFNASKLGTGGWAVPGTVEHIQFPEVNVDYV 196
Query: 261 LLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
L+VE A RL E+++ R C+IV +GQ R + ++ E LP++ D DPY
Sbjct: 197 LVVETAAMADRLIEEKYPKRENCLIVATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDPY 256
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY---KIPEQCR-LPMTEQDIK 376
G I S GS N++Y S L TPD K++G+ D+ +Y + E+ + +P ++
Sbjct: 257 GWYIYSTIKRGSINLAYLSEKLATPDAKFVGMTMDDIKEYGLENVTEKLKGIPPDKKGGP 316
Query: 377 TG--KDLLEEDFVK--KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
TG K L+EE ++ W +L L +K + E QAL++ +++++ YLP K+++
Sbjct: 317 TGDYKRLIEEMNYPWFQDKEWQRQLKLALKWGVRIEQQALANKSLEFVAKEYLPEKIRE 375
>gi|385805793|ref|YP_005842191.1| DNA topoisomerase VI subunit A [Fervidicoccus fontis Kam940]
gi|383795656|gb|AFH42739.1| DNA topoisomerase VI subunit A [Fervidicoccus fontis Kam940]
Length = 453
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 182/351 (51%), Gaps = 39/351 (11%)
Query: 83 DLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPF 142
+LS+ AV+ E LI Q+ + G + R +N +Y + ++L ++ R F
Sbjct: 14 ELSIKAVKKAFEKLIEQVRK----GEEPKLIIKKRTLANTIYDRQRKLLLLGEQKLTRKF 69
Query: 143 ASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKL-------------FQDQTQ 189
+ R+ TV + +I++ + N + T RD++Y +++Q +
Sbjct: 70 FDENEARRFMQTVLMARIIYEALVNNEYPTIRDIYYRGKHTLPHVSPKDKFKNTWEEQQE 129
Query: 190 SDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDR 249
SDAVL DV + G R + +++ EKG VVG + D+ID +KMG G AI D
Sbjct: 130 SDAVLRDVEVLTGKLREEMLILSKEKGKVVGDMRLRSGNDVIDLSKMGHGAYAIESTPDL 189
Query: 250 VGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKL 309
+ + +A ++L+VEKDA + +L ++ I+VT+ GQPD ATR F+R++ ELKL
Sbjct: 190 IEFLDVNAEYVLVVEKDAVFQQLHRFGYWKANKAILVTSAGQPDRATRRFVRRLNEELKL 249
Query: 310 PVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLP 369
PV L DSDPYG I SV+ GS +SY+S L TP ++LG+ SD+ +P +
Sbjct: 250 PVYILADSDPYGFYIYSVFKIGSITLSYESERLATPKARFLGVTMSDVFGDDVP-LNEVY 308
Query: 370 MTEQDIKTG--KDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQ 418
++ ++IK+G K L EE K++ ++AL +FG++
Sbjct: 309 LSPEEIKSGDTKKLREE-------------------KKERFLKALKTFGYK 340
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 33/47 (70%)
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
++P W++E+ + T K EI+A++S G ++L++ YLP K++ DWL
Sbjct: 406 QDPKWIKEIGIFFLTHSKLEIEAMASKGLKFLAQEYLPRKIETNDWL 452
>gi|332024438|gb|EGI64636.1| Meiotic recombination protein SPO11 [Acromyrmex echinatior]
Length = 423
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 180/310 (58%), Gaps = 22/310 (7%)
Query: 135 DKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVK------LFQDQT 188
+KTT+ FA S+ +K + + I++ +H L L N T+R FY D+K L Q
Sbjct: 127 EKTTV-DFAVKSSRKKFVLMIMIMAEVHHLLLTNTTKTRR-AFYYDLKKETTKYLVPIQR 184
Query: 189 QSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFS--DNGDMIDCTKMGMGGKAIPPN 246
D L+D+A +L C L ++A KG++ G + + DN +IDCT G G IP
Sbjct: 185 YVDRALNDIANLLECAPWDLRLLATAKGLMAGNMTITLVDN-QIIDCTIPG--GAQIPQI 241
Query: 247 IDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKME 306
I + +++ A F+L++EKDA + +L E+ CI+VT KG PDVATR+F++ + +
Sbjct: 242 ISNIISIRAKAKFVLVIEKDAVFQKLLEENCSCSLKCILVTGKGYPDVATRMFVKILSEK 301
Query: 307 LKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQC 366
++LP+ +VD+DP+G+ I+ +Y GS + ++ +L P+ +WLGI PS+L IP
Sbjct: 302 MELPIYIVVDADPFGIDIMLIYRFGSSTLCKENESLACPNARWLGIHPSEL----IPIGA 357
Query: 367 R-LPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYL 425
+ +P+TE D+ + + +V N ++L+++ K KAE++A+SSF + +E YL
Sbjct: 358 KTIPLTEADLIKLRSIEARSYV--NEAISKQLSIL--RKGKAEMEAVSSFSKNFFTETYL 413
Query: 426 PLKLQQKDWL 435
K+ +D++
Sbjct: 414 SYKIDGQDYI 423
>gi|296242524|ref|YP_003650011.1| DNA topoisomerase [Thermosphaera aggregans DSM 11486]
gi|296095108|gb|ADG91059.1| DNA topoisomerase (ATP-hydrolyzing) [Thermosphaera aggregans DSM
11486]
Length = 434
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/276 (35%), Positives = 154/276 (55%), Gaps = 15/276 (5%)
Query: 97 ILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVK 156
L+I++ I+ G +P R SN +Y + ++L +T R F ++ RK T+
Sbjct: 21 FLEISQLIVKGERPVLVMPKRTLSNTIYDHKNKLLLLGPETLKRSFTDVNEARKFMQTML 80
Query: 157 ILSLIHQLCLRNIHVTKRDLFY----------TDVKL-----FQDQTQSDAVLDDVACIL 201
+ S+I+ + N + T RDL+Y D K+ +++Q +SD+V+ D+ L
Sbjct: 81 MASIIYDSLVNNEYPTIRDLYYRGKHTISYRDIDGKIVHENSWEEQKESDSVIRDLEVFL 140
Query: 202 GCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFIL 261
R L +++ EKG VVG L+ D ID ++MG G +I P D + DA ++L
Sbjct: 141 NVLREELLILSKEKGKVVGNLVIRSGDDTIDLSRMGHGAYSIEPTPDLIEFKDVDAEYVL 200
Query: 262 LVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYG 321
+VEKDA + +L F+ + I+VT+ GQPD ATR F+R++ ELKLPV L DSDPYG
Sbjct: 201 VVEKDAVFQQLHRYGFWRKNKAILVTSAGQPDRATRRFVRRLNEELKLPVYVLADSDPYG 260
Query: 322 LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL 357
I SV+ GS +SY+S L TP K++G+ +D+
Sbjct: 261 YYIYSVFKIGSITLSYESERLATPGAKFIGVMMTDV 296
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 353 RPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVK----KNPGWVEELNLMVKTKQKAE 408
R +L +++ + C M E D+K+ +E ++P WV EL + KT K E
Sbjct: 350 RAVELVGFEVADVC---MDEGDLKSKVKKRKEGLTGYPWFRSPEWVRELCIFFKTLSKLE 406
Query: 409 IQALSSFGFQYLSEVYLPLKLQQKDWL 435
I+A++S G ++L++ Y+P K++ KDW+
Sbjct: 407 IEAMASKGLKFLADDYIPEKIETKDWI 433
>gi|383864596|ref|XP_003707764.1| PREDICTED: meiotic recombination protein SPO11-like [Megachile
rotundata]
Length = 388
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 174/309 (56%), Gaps = 19/309 (6%)
Query: 135 DKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVK------LFQDQT 188
D+ + FA+ K + + +++ H+L + N T+R L+Y D+K L Q
Sbjct: 91 DRKVVANFAASRGKDKFALMMTVMATAHRLLITNTTATRRSLYY-DLKNEETSNLVLGQG 149
Query: 189 QSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFS--DNGDMIDCTKMGMGGKAIPPN 246
D ++ VA +L C LN++A KG+ G L + DN IDC+ G G IP
Sbjct: 150 YVDRAVNCVANLLNCAPWELNILATSKGLAAGDLTLTLIDNRS-IDCSVPG--GALIPCI 206
Query: 247 IDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKME 306
V +++ A +L+VEKDA + +L ED + CI+VT KG PDVATR+ ++ + +
Sbjct: 207 NSNVTSVRTTAKMVLIVEKDAVFQKLLEDDCMSSLNCILVTGKGYPDVATRMLVKLLAEK 266
Query: 307 LKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQC 366
L LPV +VD+DP+G+ I+ VY GS +S ++ +L P+++WLGI PS+L +
Sbjct: 267 LGLPVYVVVDADPFGVDIMCVYRFGSSTLSKENESLVCPNVRWLGIHPSELQPLGVNT-- 324
Query: 367 RLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLP 426
+P+TE D+ + ++ P + +EL +M K KAEI+ +SSF ++L+ +YLP
Sbjct: 325 -IPLTEFDLSKLTAIESRPYM--TPRFFKELEIM--RKGKAEIENVSSFSRKFLTSMYLP 379
Query: 427 LKLQQKDWL 435
K++ +D++
Sbjct: 380 CKIKGQDYI 388
>gi|289192630|ref|YP_003458571.1| DNA topoisomerase (ATP-hydrolyzing) [Methanocaldococcus sp.
FS406-22]
gi|288939080|gb|ADC69835.1| DNA topoisomerase (ATP-hydrolyzing) [Methanocaldococcus sp.
FS406-22]
Length = 369
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/363 (32%), Positives = 186/363 (51%), Gaps = 24/363 (6%)
Query: 88 AVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLST 147
A Q IE L ++ ++ G +P R+ SN ++ E L K R T
Sbjct: 15 AKQKIIE-LAKKMYEDLMKGKRPKITMPIRSLSNAMFDKEKGSFTLVGKEKARTL----T 69
Query: 148 VRKSTI---TVKILSLIHQLCLRNIHVTKRDLFYTDVKL----FQDQTQSDAVLDDVACI 200
V ++ I T K+L QL + T R+ +Y F DQ S+ V++D+
Sbjct: 70 VNQAKIFAQTTKMLEFAKQLLETDDFSTLREAYYVSKNWGEARFDDQQASNNVIEDLEAA 129
Query: 201 LGCTRSSLNVIAAEKGV-VVGRLIF---SDNGDMI-DCTKMGMGGKAIPPNIDRVGDMQS 255
LG R L I E G VVG L + G+++ DC+K+G G IP ++ ++ ++++
Sbjct: 130 LGVLREHLGFIPEEDGSSVVGPLKIIEETPEGELVVDCSKLGTGAYNIPNDVTKL-NLET 188
Query: 256 DAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 315
DA FIL +E + RL +RF+++ CI+V+ KG P ATR F++++ E LPVL
Sbjct: 189 DADFILAIETSGMFARLNAERFWDKHNCILVSLKGVPARATRRFIKRLHEEHDLPVLVFT 248
Query: 316 DSDPYG-LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQD 374
D DPYG L I GS + + L+ P + +G+ P D+ Y +P P+ EQD
Sbjct: 249 DGDPYGYLNIYRTLKVGSGKAIHLADKLSIPAARLIGVTPQDIIDYDLPTH---PLKEQD 305
Query: 375 IKTGKDLLE-EDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ-QK 432
IK KD L+ +DFV+ P W + L M+ +AE Q+L+ +G +Y+ YLP K++ +
Sbjct: 306 IKRIKDGLKNDDFVRSFPEWQKALKQMLDMGVRAEQQSLAKYGLKYVVNTYLPEKIKDES 365
Query: 433 DWL 435
WL
Sbjct: 366 TWL 368
>gi|336121527|ref|YP_004576302.1| type 2 DNA topoisomerase 6 subunit A [Methanothermococcus
okinawensis IH1]
gi|334856048|gb|AEH06524.1| Type 2 DNA topoisomerase 6 subunit A [Methanothermococcus
okinawensis IH1]
Length = 365
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/353 (32%), Positives = 180/353 (50%), Gaps = 24/353 (6%)
Query: 99 QIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTI---TV 155
+ SIL G + P R+ +N + E VL K R TV ++ I TV
Sbjct: 20 HMYNSILNGKRPKLKFPVRSLANARFDKEKGTFVLMGKEKERTL----TVNQAKIFAQTV 75
Query: 156 KILSLIHQLCLRNIHVTKRDLFYTDVKL----FQDQTQSDAVLDDVACILGCTRSSLNVI 211
K++ +L + T R+ +Y F DQ S++V++D+ L R L I
Sbjct: 76 KMMEFSKELLDTDDFSTLREAYYVSKNWGEARFDDQQPSNSVIEDLEAALNFLREELGFI 135
Query: 212 AAEKGV-VVGRLIFSD---NGD--MIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
E G VVG L D G+ +DC K+G G IP +I ++ + ++DA FIL +E
Sbjct: 136 PEEDGSSVVGPLKVVDKSAEGEELKVDCEKLGSGAYNIPNDITKL-EFETDADFILAIET 194
Query: 266 DAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYG-LKI 324
+ RL ++F+ + CI+ + KG P ATR F++++ E +LPVL D DPYG L I
Sbjct: 195 AGMFARLNAEKFWKKHNCILASLKGVPARATRRFIKRLNEEHELPVLVFTDGDPYGYLNI 254
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLE- 383
GS + + L P + +G+ P D+ Y +P P+ + D+K KD L+
Sbjct: 255 YRTLKVGSGKAVHLADKLAVPAARLIGVTPQDIVDYDLPTH---PLKDHDLKRLKDGLKN 311
Query: 384 EDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKD-WL 435
+DFVK P W + LN M++ K++AE Q+L+ +G +Y+ E YLP K++ WL
Sbjct: 312 DDFVKSFPEWQKALNQMIEMKERAEQQSLAKYGLKYVVEEYLPAKIEDNSTWL 364
>gi|408381803|ref|ZP_11179351.1| DNA topoisomerase VI subunit A [Methanobacterium formicicum DSM
3637]
gi|407815734|gb|EKF86304.1| DNA topoisomerase VI subunit A [Methanobacterium formicicum DSM
3637]
Length = 351
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 170/336 (50%), Gaps = 10/336 (2%)
Query: 100 IARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILS 159
I + N + +VPSR +SN +Y + VL D+ R ++ + K V + +
Sbjct: 18 ILEDVHQNNVPAIKVPSRGTSNIVYDTDKRYYVLGDRYGKRSLGNVKQITKIAQMVYVAN 77
Query: 160 LIHQLCLRNIHVTKRDLFYT----DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEK 215
L R T R+++Y DV F DQ +S+ V +D+ LG TR L ++ E
Sbjct: 78 FCKDLVRRGKTATLREMYYVSEGWDVD-FGDQQESNIVGEDLEVTLGMTREDLGLMPEED 136
Query: 216 GV-VVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAE 274
G V G + F D+ I+ + G G I P ID V + D ++ VE + R+ +
Sbjct: 137 GASVYGNITFQDDDVEINALRAGKSGYTISPTIDEVDFVDHDVRRVIAVETMGMFHRMVQ 196
Query: 275 DRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKN 334
+ Y +F +IV KGQ ATR FL+++ EL LPV D DP+G I V GS
Sbjct: 197 ENAYKKFDSLIVGLKGQAARATRRFLKRVNEELNLPVYICNDGDPWGFHIAMVIISGSAK 256
Query: 335 MSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWV 394
+++ + L TPD K+LG+ SD+ Y +P P+ + D+ K+ L +D K+ W
Sbjct: 257 LAHVNHQLATPDAKFLGVTASDIINYDLPTD---PLKDIDVLRLKE-LSKDPRYKDEAWQ 312
Query: 395 EELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
E+ M+K +KAE Q+ S +G +Y+ + YLP KL+
Sbjct: 313 MEIKKMLKIGKKAEQQSFSKYGLEYVVDTYLPEKLE 348
>gi|337283840|ref|YP_004623314.1| DNA topoisomerase VI subunit A [Pyrococcus yayanosii CH1]
gi|334899774|gb|AEH24042.1| DNA topoisomerase VI subunit A [Pyrococcus yayanosii CH1]
Length = 382
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 187/359 (52%), Gaps = 16/359 (4%)
Query: 89 VQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTV 148
V IE L +I + AG F VP+R +N + E I + DK + R F +++
Sbjct: 19 VLRKIEELGRRILEDVKAGKNPYFDVPTRGLTNVYFDEEAKLIRMGDKLSRRYFLNVAHA 78
Query: 149 RKSTITVKILSLIHQLCLRNIHVTKRDLFY--------TDVKLFQDQTQSDAVLDDVACI 200
RK T+ +++ I +L H + R+ +Y T F+DQ++SD +++D+ +
Sbjct: 79 RKFMQTLLLMAYIKRLVSEGKHASLREAYYANKHTIPGTRENTFEDQSESDPIIEDLERM 138
Query: 201 LGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFI 260
LG R +++ A +G V G ++ D D + +K+GMGG A+P ++ + + + ++
Sbjct: 139 LGILREEMHITADRRGYVYGDIVIKDGEDEFNASKLGMGGWAVPGTVEHIQFPEINVDYV 198
Query: 261 LLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
L+VE A RL E+++ R +I+ +GQ R + ++ E LP++ D DPY
Sbjct: 199 LVVETAAMADRLIEEKYPKRERALIIATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDPY 258
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY---KIPEQCR-LPMTEQDIK 376
G I S GS N++Y S L TP K++G+ D+ +Y + E+ + +P ++
Sbjct: 259 GWYIYSTIKQGSINLAYLSEKLATPGAKFVGMTMDDIKEYGLENVTEKLKGIPPDKKGGP 318
Query: 377 TG--KDLLEEDFVK--KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
TG K L+EE +N W +L L +K + E QAL++ +++++ YLP K+++
Sbjct: 319 TGDYKRLIEELNYPWFQNKEWQRQLKLALKWGVRIEQQALANKSLEFVAKEYLPEKIRE 377
>gi|296110083|ref|YP_003617032.1| DNA topoisomerase (ATP-hydrolyzing) [methanocaldococcus infernus
ME]
gi|295434897|gb|ADG14068.1| DNA topoisomerase (ATP-hydrolyzing) [Methanocaldococcus infernus
ME]
Length = 369
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 117/360 (32%), Positives = 185/360 (51%), Gaps = 18/360 (5%)
Query: 88 AVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLST 147
A Q IE L ++ ++ G ++P R+ SN L+ + L K R ++S
Sbjct: 15 AKQKIIE-LAKKMYDDLMKGKRPKIKMPIRSLSNALFDRKKGSFTLVGKEKERTL-TVSQ 72
Query: 148 VRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKL----FQDQTQSDAVLDDVACILGC 203
+ T K++ +L + T R+ +Y F DQ S+ V++D+ LG
Sbjct: 73 AKIFAQTTKMMEFAKELLENDDFSTLREAYYVSKNWGEARFDDQQASNNVIEDLEAALGV 132
Query: 204 TRSSLNVIAAEKG-VVVGRLIF---SDNGDMI-DCTKMGMGGKAIPPNIDRVGDMQSDAM 258
R L + E G VVG L + G+++ DC ++G G IP +I ++ + ++DA
Sbjct: 133 LREHLGFVPEEDGSAVVGPLKIIEETPEGELVVDCRRLGTGAYNIPNDITKL-NFETDAD 191
Query: 259 FILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSD 318
FIL +E + RL +RF+++ CI+V+ KG P ATR F++++ E +LPVL D D
Sbjct: 192 FILAIETSGMFARLNAERFWDKHNCILVSLKGVPARATRRFIKRLHEEYELPVLVFTDGD 251
Query: 319 PYG-LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKT 377
PYG L I GS + + L+ P + +GI P D+ Y +P P+ EQDIK
Sbjct: 252 PYGYLNIYRTLKVGSGKAIHLADKLSIPAARLIGITPQDIIDYDLPTH---PLKEQDIKR 308
Query: 378 GKDLLE-EDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKD-WL 435
KD L+ +DFVK P W + L M++ +AE Q+L+ +G +Y+ YLP KL+ WL
Sbjct: 309 IKDGLKNDDFVKSFPEWQKALKQMLEMGVRAEQQSLAKYGLKYVVNTYLPEKLKDDSTWL 368
>gi|270006719|gb|EFA03167.1| hypothetical protein TcasGA2_TC013087 [Tribolium castaneum]
Length = 936
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/369 (30%), Positives = 197/369 (53%), Gaps = 16/369 (4%)
Query: 74 LSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRI-- 131
L + C + + +QS I ++ +I + N V R+ L V E +R+
Sbjct: 577 LLSGCETIQVIDKKKIQSKIYDILSKIYE-VFENNKMPCLVVRRSYKASLCVYENERLQC 635
Query: 132 VLKDKTTLRP--FASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQ 189
D LR F R+ V +L ++ L N +TKR+++Y L +Q Q
Sbjct: 636 ASSDAGKLRKIHFPGKLCCRRFCRLVYMLGKVYNLLENNQKLTKREIYYQIKHLVTNQEQ 695
Query: 190 SDAVLDDVACILGCTRSSLNVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNID 248
+ V+ D++ ++G LN+I+ G+V G L +F +G+M +C IP ++D
Sbjct: 696 VNRVVGDISQLVGVGPWDLNIIS-HSGLVYGNLRLFWASGEMTNC---NTPATLIPYDLD 751
Query: 249 RVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF--PCIIVTAKGQPDVATRLFLRKMKME 306
+ ++ S A FIL+VEK++ + +L E+ N+ P I++T KG PD+ TRLFL+K+
Sbjct: 752 EIIEIHSTANFILVVEKESIFHKLLEEDLPNKLARPFIMITGKGVPDINTRLFLKKLSTM 811
Query: 307 LKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQC 366
LKLPV LVD D YG++I+ Y G+ + S L P+ +WLG+ PS++ K+ I Q
Sbjct: 812 LKLPVFVLVDPDLYGIRIMLNYRFGTITNCHLSEQLAVPNARWLGVFPSEIAKFGIQFQ- 870
Query: 367 RLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLP 426
+T++++K + L+ +++ +P +ELN ++ + +K I+ L +LSE YLP
Sbjct: 871 --NITQREVKAINETLKYPYMEAHPKIADELNYLLHSGKKGSIEGLVK-NNTFLSEAYLP 927
Query: 427 LKLQQKDWL 435
+KL +D++
Sbjct: 928 VKLFNQDFI 936
>gi|424814408|ref|ZP_18239586.1| DNA topoisomerase VI, subunit A [Candidatus Nanosalina sp. J07AB43]
gi|339758024|gb|EGQ43281.1| DNA topoisomerase VI, subunit A [Candidatus Nanosalina sp. J07AB43]
Length = 376
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 165/337 (48%), Gaps = 21/337 (6%)
Query: 117 RASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDL 176
R+ +N Y E R+ L D + R F ++S RK T + + +L + R++
Sbjct: 42 RSKTNVEYDEEEGRLSLGDSYSTRKFLNISHARKFMQTTLVANKTKELVENGRTASIREV 101
Query: 177 FYT--------DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNG 228
+Y D F+DQ +S+ V+ D+ G R L++ A KG + G + +D+G
Sbjct: 102 YYQLKHSVPGLDENTFEDQDESNNVVVDIETATGAIREDLHLFAEPKGRLFGPITINDSG 161
Query: 229 DMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTA 288
D IDC MG G AIP +D + A FIL+VE A RL E+ F+ I++
Sbjct: 162 DSIDCMAMGTSGLAIPSIVDHYEFEEHSADFILVVETSAMVNRLVEEDFHKEHNVILIGT 221
Query: 289 KGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIK 348
GQP R + M L LPV D DP+G I SV GS ++++ S L TPD K
Sbjct: 222 GGQPARGARRLINIMHNRLDLPVYVFTDGDPWGYYIYSVLKSGSMSLAFQSDRLATPDAK 281
Query: 349 WLGIRPSDLDKYKI----------PEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELN 398
+G+ D+D Y + PE P +D K +D+++ ++++K+ W +
Sbjct: 282 LIGMTMEDIDAYDLHHVTEDLKGKPEDSGGPT--KDFKRIRDVMDYEWMQKDE-WQNQFQ 338
Query: 399 LMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
M+ + E QAL+S Q+++ YLP K++Q +L
Sbjct: 339 KMLDKGVRVEQQALASQSLQFVANEYLPKKIEQDQFL 375
>gi|7994697|sp|O59209.2|TOP6A_PYRHO RecName: Full=Type II DNA topoisomerase VI subunit A
Length = 382
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 187/361 (51%), Gaps = 20/361 (5%)
Query: 89 VQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTV 148
V +E L +I +G F VP+R +N + E I L D+ + R F +++
Sbjct: 19 VLKKLEDLAWKILEEAKSGKNPYFDVPTRGLNNVYFDEESRLIRLGDRLSRRYFLNVAHA 78
Query: 149 RKSTITVKILSLIHQLCLRNIHVTKRDLFY--------TDVKLFQDQTQSDAVLDDVACI 200
RK T+ +++ I +L H + R+ +Y T F+DQ++SD +++D+ +
Sbjct: 79 RKFMQTLILMAYIKRLVSEGKHASLREAYYANKHTVPGTRENTFEDQSESDPIIEDLERM 138
Query: 201 LGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFI 260
LG R +++ A +G + G ++ D D + +K+G GG A+P ++ + + + ++
Sbjct: 139 LGVLREEMHITADRRGYIYGDIVIKDGEDEFNASKLGTGGWAVPGTVEHIQFPEINVDYV 198
Query: 261 LLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
L+VE A RL E+++ R C+IV +GQ R + ++ E LP++ D DPY
Sbjct: 199 LVVETAAMADRLIEEKYPKRENCLIVATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDPY 258
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY---KIPEQCR-LPMTEQDIK 376
G I S GS N++Y S L TPD K++G+ D+ +Y + E+ + +P ++
Sbjct: 259 GWYIYSTIKRGSINLAYLSEKLATPDAKFVGMTMDDIKEYNLENVTEKLKGIPPDKKGGP 318
Query: 377 TG--KDLLEE----DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
TG K L+EE F K W +L L +K + E QAL++ +++++ YLP K++
Sbjct: 319 TGDYKRLIEELNYPWFQDKE--WQRQLKLALKWGVRIEQQALANKSLEFVAKEYLPEKIR 376
Query: 431 Q 431
+
Sbjct: 377 E 377
>gi|241679558|ref|XP_002412658.1| topoisomerase 6 subunit A, putative [Ixodes scapularis]
gi|215506460|gb|EEC15954.1| topoisomerase 6 subunit A, putative [Ixodes scapularis]
Length = 264
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 146/233 (62%), Gaps = 7/233 (3%)
Query: 205 RSSLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLV 263
R LNV+A KG+ G + F+D +G+ +D + +P ++ + ++QS A FIL++
Sbjct: 37 RRCLNVLATSKGLFSGDVRFTDGSGNFVDGS---FKPTLVPTDVGGMRNIQSSATFILVI 93
Query: 264 EKDAAYIRLAEDRFY-NRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGL 322
EKDA + +L D F + PCI++T KG PDV TR LR++ +E+ +PV ALVD+DPYG+
Sbjct: 94 EKDATFQKLLNDGFLKSAGPCILITGKGYPDVNTRELLRRLHVEVDIPVYALVDADPYGI 153
Query: 323 KILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLL 382
+IL VY GS M+ ++ ++ P I+WLG+ PSD+ +++ + C P++ D ++LL
Sbjct: 154 EILCVYAYGSLAMANETDSMAVPRIRWLGVHPSDVVTFEL-KDCP-PLSYGDKSKLRNLL 211
Query: 383 EEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+V P W E++ L+ ++KAEIQ L S +LS+VY+P K++ W+
Sbjct: 212 ARPYVDSKPAWKEQMVLLDGLQRKAEIQGLCSVDPTFLSDVYIPSKIKFSGWI 264
>gi|297527444|ref|YP_003669468.1| DNA topoisomerase [Staphylothermus hellenicus DSM 12710]
gi|297256360|gb|ADI32569.1| DNA topoisomerase (ATP-hydrolyzing) [Staphylothermus hellenicus DSM
12710]
Length = 445
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/273 (34%), Positives = 148/273 (54%), Gaps = 15/273 (5%)
Query: 100 IARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILS 159
+A+ I+ G +P R SN +Y + ++L + R F ++ RK T+ + S
Sbjct: 31 LAKRIIEGKRPVLVMPKRILSNTIYDEKNKLLLLGPEMQRRSFLDVNEARKFMQTLLMAS 90
Query: 160 LIHQLCLRNIHVTKRDLFY---------------TDVKLFQDQTQSDAVLDDVACILGCT 204
+I++ N + T RDL+Y + +Q +SD+V+ D+ LG
Sbjct: 91 IIYEALANNEYPTIRDLYYRGKHTIIYRDLHGRTHHENTWDEQRESDSVIRDLEVYLGVL 150
Query: 205 RSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVE 264
R + +++ EKG VVG L+ D ID +KMG G +I P D + DA ++L+VE
Sbjct: 151 REEMLILSKEKGKVVGNLVIKSGDDTIDLSKMGHGAYSIEPTPDLIEFKDVDAEYVLVVE 210
Query: 265 KDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
KDA + +L F+ + I++T+ GQPD ATR F+R++ ELKLP+ L D+DPYG I
Sbjct: 211 KDAVFQQLHRHGFWKKQKAILITSAGQPDRATRRFVRRLNEELKLPIYILADADPYGWYI 270
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL 357
SV+ GS +SY+S L TP K++G+ +D+
Sbjct: 271 YSVFKIGSITLSYESERLATPSAKFIGVTMTDV 303
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+ P W+ EL + KT K EI+A++S G ++L++ Y+P K+ DW+
Sbjct: 398 RTPEWIRELCIFFKTLSKLEIEAMASKGLKFLADKYIPEKISVGDWI 444
>gi|405945979|gb|EKC17530.1| Meiotic recombination protein SPO11 [Crassostrea gigas]
Length = 236
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 142/229 (62%), Gaps = 3/229 (1%)
Query: 205 RSSLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLV 263
R L+V+A KG + G L F D +G+ +DC++ G +P +I+ + +Q+DA +L+V
Sbjct: 6 RWRLHVLATSKGCIAGNLCFHDVDGNYVDCSQTK-AGIQVPSHIEGLEHIQTDADLVLVV 64
Query: 264 EKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGL 322
EKDA + RL + F R PCI++T KG PD+ TR+ L ++ E LVD+DPYG+
Sbjct: 65 EKDAIFQRLLSEGFCERMRPCIVITGKGFPDMNTRMLLNRLWREFSPKFYILVDADPYGI 124
Query: 323 KILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLL 382
+I++VY GS+++S+++ LT P ++WLG+ PSD+ + ++ E + + D D+L
Sbjct: 125 EIMTVYKYGSRSLSFEAPMLTVPGLEWLGVLPSDIQRLRLKEDSLIDLKLSDRNKISDIL 184
Query: 383 EEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
++ K+ +ELN+++ +KAEI++L S +L+ VYLP KL+
Sbjct: 185 ARPYISKSQLLYKELNVLLDLGKKAEIESLDSISTSFLTNVYLPTKLKH 233
>gi|237840215|ref|XP_002369405.1| meiotic recombination protein SPO11, putative [Toxoplasma gondii
ME49]
gi|211967069|gb|EEB02265.1| meiotic recombination protein SPO11, putative [Toxoplasma gondii
ME49]
Length = 342
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 166/312 (53%), Gaps = 12/312 (3%)
Query: 125 VPELDRIVLKDKTT-LRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKL 183
V L R+ ++T LR F ++K T + +L IH L + N T+R+LFY V +
Sbjct: 42 VDHLTRLTKAERTERLRTFG----IKKLTWVLSLLDQIHGLLMTNRAATQRELFYGLVNV 97
Query: 184 FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAI 243
F Q Q +A L + L R SLNV A++KG+V G L F +DC + G G I
Sbjct: 98 FDTQAQVNAQLQQIVSWLEIPRDSLNVFASQKGLVAGMLTFVKGSLTLDCRRTGT-GVLI 156
Query: 244 PPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKM 303
+ V ++S A +I++VEKDA + L E + +N PCI++T KG PD TR LR++
Sbjct: 157 SETLVEVDRLESHASYIIVVEKDAIFQTLCEQQIWNIIPCILITGKGFPDFVTRKLLRRL 216
Query: 304 KMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIP 363
+M L + V DP+G+ I Y GS+ +++ + + W+G+ DL+ ++P
Sbjct: 217 QMSLNIEVGRYF--DPHGISIFLSYQHGSR--AFEGPLVRCAVLHWIGLCFEDLE--QLP 270
Query: 364 EQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEV 423
RLP+ +D K LL ++ + + M++ K EI+A++ GF+YL+
Sbjct: 271 VDVRLPLLSRDRALLKSLLVHRKIRDCERLQAQCSFMMEHDTKFEIEAITCLGFEYLARY 330
Query: 424 YLPLKLQQKDWL 435
Y+P K+ ++ W+
Sbjct: 331 YIPSKILKRTWI 342
>gi|261402948|ref|YP_003247172.1| DNA topoisomerase VI subunit A [Methanocaldococcus vulcanius M7]
gi|261369941|gb|ACX72690.1| DNA topoisomerase (ATP-hydrolyzing) [Methanocaldococcus vulcanius
M7]
Length = 369
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 119/378 (31%), Positives = 192/378 (50%), Gaps = 30/378 (7%)
Query: 73 SLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIV 132
+LS RE+ A Q I+ L ++ ++ G +P R+ SN ++ E
Sbjct: 6 TLSKKPREI------ARQKIID-LAKKMYNDLMKGKRPKITMPIRSLSNAMFDREKGSFT 58
Query: 133 LKDKTTLRPFASLSTVRKSTI---TVKILSLIHQLCLRNIHVTKRDLFYTDVKL----FQ 185
L K R TV ++ I T K++ QL + T R+ +Y F
Sbjct: 59 LVGKEKARTL----TVNQAKIFAQTTKMMEFAKQLLETDDFSTLREAYYVSKNWGEARFD 114
Query: 186 DQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIF---SDNGDMI-DCTKMGMGG 240
+Q S+ V++D+ LG R L I E G VVG L + G+++ DC+K+G G
Sbjct: 115 EQQASNNVIEDLEAALGVLREHLGFIPEEDGSSVVGPLKIIEETPEGELVVDCSKLGTGA 174
Query: 241 KAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFL 300
IP +I ++ +++++A FIL +E + RL +RF+++ CI+V+ KG P ATR F+
Sbjct: 175 YNIPNDITKL-NLETNADFILAIETSGMFARLNAERFWDKHNCILVSLKGVPARATRRFI 233
Query: 301 RKMKMELKLPVLALVDSDPYG-LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDK 359
+++ E +PVL D DPYG L I GS + + L+ P + +G+ P D+
Sbjct: 234 KRLHEEYDIPVLVFTDGDPYGYLNIYRTLKVGSGKAIHLADKLSIPSARLIGVTPQDIVD 293
Query: 360 YKIPEQCRLPMTEQDIKTGKDLLE-EDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQ 418
Y +P P+ EQDIK KD L+ +DFV+ P W + L M+ +AE Q+L+ +G +
Sbjct: 294 YDLPTH---PLKEQDIKRIKDGLKNDDFVRSFPEWQKALKQMLDMGVRAEQQSLAKYGLK 350
Query: 419 YLSEVYLPLKLQ-QKDWL 435
Y+ YLP K++ + WL
Sbjct: 351 YVVNTYLPEKIKDESTWL 368
>gi|390939025|ref|YP_006402763.1| DNA topoisomerase [Desulfurococcus fermentans DSM 16532]
gi|390192132|gb|AFL67188.1| DNA topoisomerase (ATP-hydrolyzing) [Desulfurococcus fermentans DSM
16532]
Length = 433
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 142/258 (55%), Gaps = 14/258 (5%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
+P R SN +Y + ++L +T+ R F ++ RK TV + S+I+ + N + T
Sbjct: 38 LPKRTLSNTIYDYKNKLLLLGPETSKRSFMDVNEARKFMQTVLVASIIYDSLVNNEYPTI 97
Query: 174 RDLFY--------------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVV 219
RDL+Y +++Q +SD V+ D+ L R L +++ EKG VV
Sbjct: 98 RDLYYRGKHSISYRSGGKEVHENTWEEQKESDGVIRDLEVYLNILREELLILSKEKGKVV 157
Query: 220 GRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYN 279
G L+ D+ID ++MG G +I P D + DA +IL+VEKDA + +L F+
Sbjct: 158 GNLVIRSGDDVIDLSRMGHGAYSIEPTPDLIEFKDVDAEYILVVEKDAVFQQLHRYGFWK 217
Query: 280 RFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDS 339
+ I++T+ GQPD ATR FLR++ E LPV L DSDPYG I SV+ GS +SY+S
Sbjct: 218 KHKAILITSAGQPDRATRRFLRRLSDEYNLPVYILADSDPYGFYIYSVFKIGSITLSYES 277
Query: 340 ANLTTPDIKWLGIRPSDL 357
L TP K++G+ +D+
Sbjct: 278 ERLATPRAKFIGVMMTDV 295
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+ P W+ EL + +T K EI+A++S G ++L++ Y+P K+ DW+
Sbjct: 386 QTPEWIRELCIFFRTLSKLEIEAMASKGLKFLADHYIPEKISSGDWI 432
>gi|218884529|ref|YP_002428911.1| DNA topoisomerase VI subunit A [Desulfurococcus kamchatkensis
1221n]
gi|218766145|gb|ACL11544.1| Type 2 DNA topoisomerase VI subunit A [Desulfurococcus
kamchatkensis 1221n]
Length = 433
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 167/327 (51%), Gaps = 30/327 (9%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
+P R SN +Y + ++L +T+ R F ++ RK TV + S+I+ + N + T
Sbjct: 38 LPKRTLSNTIYDYKNKLLLLGPETSKRSFMDVNEARKFMQTVLVASIIYDSLVNNEYPTI 97
Query: 174 RDLFY--------------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVV 219
RDL+Y + +Q +SD V+ D+ L R L +++ EKG VV
Sbjct: 98 RDLYYRGKHSISYRSGGKEVHENTWDEQKESDGVIRDLEVYLNILREELLILSKEKGKVV 157
Query: 220 GRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYN 279
G L+ D+ID ++MG G +I P D + DA +IL+VEKDA + +L F+
Sbjct: 158 GNLVIRSGDDVIDLSRMGHGAYSIEPTPDLIEFKDVDAEYILVVEKDAVFQQLHRYGFWK 217
Query: 280 RFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDS 339
+ I++T+ GQPD ATR FLR++ E LPV L DSDPYG I SV+ GS +SY+S
Sbjct: 218 KHKAILITSAGQPDRATRRFLRRLSDEYNLPVYILADSDPYGFYIYSVFKIGSITLSYES 277
Query: 340 ANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQD-------IKTGKDLLEEDFVKKNP- 391
L TP K++G+ +D+ I R + E+D I G D L KK P
Sbjct: 278 ERLATPRAKFIGVMMTDVFGDDI---FREMLREKDSRSRLNSIVKGLDKL----AKKKPY 330
Query: 392 -GWVEELNLMVKTKQKAEIQALSSFGF 417
E N ++K KQ+ +A+ G+
Sbjct: 331 LSEAERRNYIIKAKQRDLERAVELVGY 357
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+ P W+ EL + KT K EI+A++S G ++L++ Y+P K+ DW+
Sbjct: 386 QTPEWIRELCIFFKTLSKLEIEAMASKGLKFLADHYIPEKISGGDWI 432
>gi|221483092|gb|EEE21416.1| meiotic recombination protein SPO11, putative [Toxoplasma gondii
GT1]
Length = 342
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 166/312 (53%), Gaps = 12/312 (3%)
Query: 125 VPELDRIVLKDKTT-LRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKL 183
V L R+ ++T LR F ++K T + +L IH L + N T+R+LFY V +
Sbjct: 42 VDHLTRLTKAERTERLRTFG----IKKLTWVLSLLDQIHGLLMTNRAATQRELFYGLVNV 97
Query: 184 FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAI 243
F Q Q +A L + L R SLNV A++KG+V G L F +DC + G G I
Sbjct: 98 FDTQAQVNAQLQQIVSWLEIPRDSLNVFASQKGLVAGMLTFVKGSLTLDCRRTGT-GVLI 156
Query: 244 PPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKM 303
+ V ++S A +I++VEKDA + L E + +N PCI++T KG PD TR LR++
Sbjct: 157 SETLVEVDRLESHASYIIVVEKDAIFQTLCEQQIWNIIPCILITGKGFPDFVTRKLLRRL 216
Query: 304 KMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIP 363
+M L + V DP+G+ I Y GS+ +++ + + W+G+ DL+ ++P
Sbjct: 217 QMSLNIKVGRYF--DPHGISIFLSYQHGSR--AFEGPLVRCAVLHWIGLCFEDLE--QLP 270
Query: 364 EQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEV 423
RLP+ +D K LL ++ + + M++ K EI+A++ GF+YL+
Sbjct: 271 VDVRLPLLSRDRALLKSLLVHPKIRDCERLQAQCSFMMEHDTKFEIEAITCLGFEYLARY 330
Query: 424 YLPLKLQQKDWL 435
Y+P K+ ++ W+
Sbjct: 331 YIPSKILKRTWI 342
>gi|288561120|ref|YP_003424606.1| DNA topoisomerase VI subunit A [Methanobrevibacter ruminantium M1]
gi|288543830|gb|ADC47714.1| DNA topoisomerase VI subunit A [Methanobrevibacter ruminantium M1]
Length = 362
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 165/323 (51%), Gaps = 8/323 (2%)
Query: 111 SFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIH 170
+ ++PSR + N +Y + +L D+ R ++ +RK V + + L R+
Sbjct: 41 TLKIPSRGTGNIVYDEDKRYYILGDRYGRRSLGNVKQIRKLGQMVYVANFCKDLVQRDKT 100
Query: 171 VTKRDLFYTDVKL---FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
T R+++Y F Q +S+ V +D+ LG TR L ++ E G V G + D
Sbjct: 101 ATIREMYYISEGWGIEFNTQQESNIVGEDLEVALGATREDLGLMPEEDGASVYGDITLLD 160
Query: 227 NGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIV 286
I+ + G G I P ID+V + A F+L VE + RL +++ + R+ C+IV
Sbjct: 161 GDYEINAARAGKSGYTISPTIDQVELLDCGADFLLAVETMGMFHRLVQEKAHERYNCLIV 220
Query: 287 TAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPD 346
KGQ ATR F++++ EL LPV D DP+G I V GS +++ + +L TPD
Sbjct: 221 GLKGQAARATRRFIKRVNEELGLPVYICNDGDPWGFHIAQVIISGSAKLAHVNHDLATPD 280
Query: 347 IKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQK 406
K++G+ SD+ Y +P P+ + D+ K+ L +D + W E+ M+K +K
Sbjct: 281 AKFIGVTASDIQNYDLPTD---PLKDIDVLRLKE-LSKDPRYQTDFWQTEIKKMLKLGKK 336
Query: 407 AEIQALSSFGFQYLSEVYLPLKL 429
AE Q+ S +G +Y+ + Y P KL
Sbjct: 337 AEQQSFSKYGLEYVVDTYFPEKL 359
>gi|375084292|ref|ZP_09731298.1| DNA topoisomerase VI subunit A [Thermococcus litoralis DSM 5473]
gi|374741052|gb|EHR77484.1| DNA topoisomerase VI subunit A [Thermococcus litoralis DSM 5473]
Length = 381
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 187/364 (51%), Gaps = 18/364 (4%)
Query: 89 VQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIV-LKDKTTLRPFASLST 147
V +E ++ I AG VP+R SN +Y E DR++ + +KT+ R ++
Sbjct: 18 VLQKLEEFGKEVLEEIKAGRNPFIDVPTRGLSN-VYFDEKDRLIKMGNKTSRRYLFHVAH 76
Query: 148 VRKSTITVKILSLIHQLCLRNIHVTKRDLFY--------TDVKLFQDQTQSDAVLDDVAC 199
RK T+ I + I +L H + R+ +Y T F+DQ++SD +++D+
Sbjct: 77 ARKFMQTLLIAAYIKRLVAEGKHASLREAYYANKHTIPGTKENTFEDQSESDPIIEDLER 136
Query: 200 ILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMF 259
+ G R +++ A +G V G ++ D D + +K+GMGG A+P ++ + + + +
Sbjct: 137 MFGVLREEMHITADRRGYVYGDIVIKDGEDEFNASKLGMGGWAVPGTVEHIEFPEINVDY 196
Query: 260 ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDP 319
+L+VE A RL E+++ + +IV +GQ R + ++ E LP++ D DP
Sbjct: 197 VLVVETAAMADRLIEEKYPKKEKALIVATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDP 256
Query: 320 YGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY---KIPEQCR-LPMTEQDI 375
YG I S GS N++Y S L TP+ K++G+ D+ KY + E+ + +P ++
Sbjct: 257 YGWYIYSTIKQGSINLAYLSEKLATPEAKFVGMTMDDIKKYGLENVTEKLKGIPPNKKGG 316
Query: 376 KTG--KDLLEEDFVK--KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
TG K ++EE +N W +L L +K + E QAL++ ++++ YLP K+
Sbjct: 317 PTGDYKRIIEEMNYPWFQNKEWQRQLKLALKWGVRIEQQALANKSLEFVARRYLPEKIAN 376
Query: 432 KDWL 435
++ L
Sbjct: 377 EELL 380
>gi|6573667|pdb|1D3Y|A Chain A, Structure Of The Dna Topoisomerase Vi A Subunit
gi|6573668|pdb|1D3Y|B Chain B, Structure Of The Dna Topoisomerase Vi A Subunit
Length = 301
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 164/304 (53%), Gaps = 19/304 (6%)
Query: 147 TVRKSTI---TVKILSLIHQLCLRNIHVTKRDLFYTDVKL----FQDQTQSDAVLDDVAC 199
TV ++ I T K+L QL + T R+ +Y F DQ S+ V++D+
Sbjct: 1 TVNQAKIFAQTTKMLEFAKQLLETDDFSTLREAYYVSKNWGEARFDDQQASNNVIEDLEA 60
Query: 200 ILGCTRSSLNVIAAEKGV-VVGRLIF---SDNGDMI-DCTKMGMGGKAIPPNIDRVGDMQ 254
LG R L I E G VVG L + G+++ DCTK+G G IP ++ ++ +++
Sbjct: 61 ALGVLREHLGFIPEEDGSSVVGPLKIIEETPEGELVVDCTKLGTGAYNIPNDVTKL-NLE 119
Query: 255 SDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLAL 314
+DA FIL +E + RL +RF+++ CI+V+ KG P ATR F++++ E LPVL
Sbjct: 120 TDADFILAIETSGMFARLNAERFWDKHNCILVSLKGVPARATRRFIKRLHEEHDLPVLVF 179
Query: 315 VDSDPYG-LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQ 373
D DPYG L I GS + + L+ P + +G+ P D+ Y +P P+ EQ
Sbjct: 180 TDGDPYGYLNIYRTLKVGSGKAIHLADKLSIPAARLIGVTPQDIIDYDLPTH---PLKEQ 236
Query: 374 DIKTGKDLLE-EDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ-Q 431
DIK KD L+ +DFV+ P W + L M+ +AE Q+L+ +G +Y+ YLP K++ +
Sbjct: 237 DIKRIKDGLKNDDFVRSFPEWQKALKQMLDMGVRAEQQSLAKYGLKYVVNTYLPEKIKDE 296
Query: 432 KDWL 435
WL
Sbjct: 297 STWL 300
>gi|304315143|ref|YP_003850290.1| type II DNA topoisomerase VI, subunit A [Methanothermobacter
marburgensis str. Marburg]
gi|302588602|gb|ADL58977.1| type II DNA topoisomerase VI, subunit A [Methanothermobacter
marburgensis str. Marburg]
Length = 353
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 164/323 (50%), Gaps = 8/323 (2%)
Query: 112 FQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHV 171
+VPSR +SN +Y E +L D+ R ++ ++K + + L R
Sbjct: 30 IKVPSRGTSNIIYDEEKRHYILGDRYGTRSMGNVKQIKKIGQMLYTANFCKDLVAREKTA 89
Query: 172 TKRDLFYTDVKL---FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNG 228
T R+L+Y F DQ +S+ V +D+ LG TR L ++ E G V + G
Sbjct: 90 TLRELYYISEGWEVDFADQQESNIVGEDLEVTLGMTREELGLMPEEDGASVYGALTVREG 149
Query: 229 DM-IDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVT 287
D+ I+ + G G I P ID V + D ++ VE + RL +++ Y +F +IV
Sbjct: 150 DIEINALRSGKSGYNISPTIDEVEFVDHDVERVIAVETMGMFHRLVQEKAYKKFDALIVG 209
Query: 288 AKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDI 347
KGQ ATR F++++ EL LPV D DP+G I V GS +++ + L TPD
Sbjct: 210 LKGQAARATRRFIKRVNEELDLPVYICNDGDPWGFHIAMVIISGSAKLAHVNHQLATPDA 269
Query: 348 KWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKA 407
K+LG+ SD+ Y +P P+ + D+ K+LL D ++ W E+ M+K +KA
Sbjct: 270 KFLGVTASDIINYDLPTD---PLKDIDVVRLKELL-NDPRYRDEFWKTEIKKMLKIGKKA 325
Query: 408 EIQALSSFGFQYLSEVYLPLKLQ 430
E Q+ S +G +Y+ + YLP KL+
Sbjct: 326 EQQSFSKYGLEYVVDTYLPEKLE 348
>gi|389852867|ref|YP_006355101.1| DNA topoisomerase VI subunit A [Pyrococcus sp. ST04]
gi|388250173|gb|AFK23026.1| DNA topoisomerase VI subunit A [Pyrococcus sp. ST04]
Length = 382
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 187/359 (52%), Gaps = 16/359 (4%)
Query: 89 VQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTV 148
V +E L +I + AG F VP+R +N + E I + DK + R F +++
Sbjct: 19 VLKKLEELANRILEDVKAGKNPYFDVPTRGLNNVYFDEEARLIRMGDKLSKRYFLNVAHA 78
Query: 149 RKSTITVKILSLIHQLCLRNIHVTKRDLFY--------TDVKLFQDQTQSDAVLDDVACI 200
RK T+ +++ + +L H + R+ +Y T F+DQ++SD +++D+ +
Sbjct: 79 RKFMQTLILMAYVKRLVSEGKHASLREAYYANKHTIPGTRENTFEDQSESDPIIEDLERM 138
Query: 201 LGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFI 260
LG R +++ A +G + G ++ D D + +K+G GG A+P ++ + + + ++
Sbjct: 139 LGVLREEMHITADRRGYIYGDIVIKDGEDEFNASKLGTGGWAVPGTVEHIQFPEINVDYV 198
Query: 261 LLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
L+VE A RL E+++ + +IV +GQ R + ++ E LP++ D DPY
Sbjct: 199 LVVETAAMADRLIEEKYPKKERALIVATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDPY 258
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY---KIPEQCR-LPMTEQDIK 376
G I S GS N++Y S L TPD K++G+ D+ +Y + E+ + +P ++
Sbjct: 259 GWYIYSTIKQGSINLAYLSEKLATPDAKFVGMTMDDIKEYGLENVTEKLKGIPPDKKGGP 318
Query: 377 TG--KDLLEEDFVK--KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
TG K ++EE +N W +L L +K + E QAL++ +++++ YLP K+++
Sbjct: 319 TGDYKRIIEELNYPWFQNKEWQRQLKLALKWGVRIEQQALANKSLEFVAKEYLPEKIRE 377
>gi|390962072|ref|YP_006425906.1| DNA topoisomerase VI subunit A [Thermococcus sp. CL1]
gi|390520380|gb|AFL96112.1| DNA topoisomerase VI subunit A [Thermococcus sp. CL1]
Length = 386
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 192/374 (51%), Gaps = 18/374 (4%)
Query: 79 REVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIV-LKDKT 137
RE + V S +E ++ I G F +P R N +Y E R++ + DK
Sbjct: 13 RERFSYDPNKVLSKLEEYGRRVLEDIKQGRNPYFDIPMRGLGN-VYFDERRRVIRMGDKL 71
Query: 138 TLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFY--------TDVKLFQDQTQ 189
+ R F +++ RK T+ I++ + +L N H + R+ +Y T F+DQ +
Sbjct: 72 SRRYFLNVAHARKFMQTLLIMAYVKRLVSENKHASLREAYYANKHTIPGTKENTFEDQRE 131
Query: 190 SDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDR 249
SD +++D+ ++G R +++ A +G + G ++ D D + +K+GMGG A+P ++
Sbjct: 132 SDPIIEDLERMMGVLREEMHLTADRRGYIYGDIVIRDGEDEFNTSKLGMGGWAVPGTVEH 191
Query: 250 VGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKL 309
+ ++ + + L+VE A RL E++F + +I+ +GQ R + ++ E L
Sbjct: 192 LQFVEVNVDYALVVETAAMADRLIEEKFPRKENALIIATQGQASRGVRRLIHRLHYEEGL 251
Query: 310 PVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY---KIPEQC 366
P++ D DPYG I S GS N++Y S L TP+ K++G+ D+++Y + E+
Sbjct: 252 PIIVFTDGDPYGWYIYSTIKQGSINLAYLSDKLATPEAKFVGMTMDDIERYGLKNVTEKL 311
Query: 367 R-LPMTEQDIKTG--KDLLEEDFVK--KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLS 421
+ +P ++ TG K +LEE +N W +L + +K + E QAL++ ++++
Sbjct: 312 KGIPPNKKGGPTGDYKRILEEMEYPWFQNKEWQRQLKMALKMGVRIEQQALANKSLEFVA 371
Query: 422 EVYLPLKLQQKDWL 435
+ YLP K+ + L
Sbjct: 372 KKYLPEKINNGELL 385
>gi|15679026|ref|NP_276143.1| DNA topoisomerase VI subunit A [Methanothermobacter
thermautotrophicus str. Delta H]
gi|3122955|sp|O27089.1|TOP6A_METTH RecName: Full=Type II DNA topoisomerase VI subunit A
gi|2622109|gb|AAB85504.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 353
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 163/323 (50%), Gaps = 8/323 (2%)
Query: 112 FQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHV 171
+VPSR +SN +Y + VL D+ R ++ ++K + + L R
Sbjct: 30 IKVPSRGTSNIIYDEDKRHYVLGDRYGTRSMGNVKQIKKIGQMLYTANFCKDLVAREKTA 89
Query: 172 TKRDLFYTDVKL---FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNG 228
T R+L+Y F DQ +S+ V +D+ LG TR L ++ E G V + G
Sbjct: 90 TLRELYYISEGWEVDFADQQESNIVGEDLEVTLGMTREELGLMPEEDGASVYGALTVREG 149
Query: 229 DM-IDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVT 287
D+ ID + G G I P ID V + D ++ VE + RL +++ Y +F +IV
Sbjct: 150 DIEIDALRSGKSGYNISPTIDEVEFVDHDVERVIAVETMGMFHRLVQEKAYKKFDALIVG 209
Query: 288 AKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDI 347
KGQ ATR F++++ EL LPV D DP+G I V GS +++ + L TPD
Sbjct: 210 LKGQAARATRRFIKRVNEELNLPVYICNDGDPWGFHIAMVIISGSAKLAHVNHQLATPDA 269
Query: 348 KWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKA 407
K+LG+ SD+ Y +P P+ + D+ K+LL +D + W E+ M+ +KA
Sbjct: 270 KFLGVTASDIINYDLPTD---PLKDVDVVRLKELL-QDPRYRGDFWKTEIKKMLTIGKKA 325
Query: 408 EIQALSSFGFQYLSEVYLPLKLQ 430
E Q+ S +G +Y+ + YLP KL+
Sbjct: 326 EQQSFSKYGLEYVVDTYLPEKLE 348
>gi|320101390|ref|YP_004176982.1| DNA topoisomerase [Desulfurococcus mucosus DSM 2162]
gi|319753742|gb|ADV65500.1| DNA topoisomerase (ATP-hydrolyzing) [Desulfurococcus mucosus DSM
2162]
Length = 434
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 171/327 (52%), Gaps = 23/327 (7%)
Query: 112 FQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHV 171
F +P R SN +Y + ++L +T R F ++ RK TV + S+I+ + N +
Sbjct: 36 FVMPKRTLSNTIYDYKNKLLLLGPETLKRSFTDVNEARKFMQTVLMASIIYDSLVNNEYP 95
Query: 172 TKRDLFY---------------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKG 216
T RDL+Y + +Q +SD+V+ D+ L R L +++ EKG
Sbjct: 96 TIRDLYYRGKHSISYRSSSGREVHENTWDEQKESDSVIRDLEVFLNVLREELLILSKEKG 155
Query: 217 VVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDR 276
VVG L+ D ID ++MG G +I P D + DA ++L+VEKDA + +L
Sbjct: 156 KVVGNLVIRSGDDTIDLSRMGHGAYSIEPTPDLIEFKDVDAEYVLVVEKDAVFQQLHRYG 215
Query: 277 FYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMS 336
F+ + I++T+ GQPD ATR FLR++ E LPV L DSDPYG I SV+ GS +S
Sbjct: 216 FWKKNKAILITSAGQPDRATRRFLRRLSDEYNLPVYILTDSDPYGFYIYSVFKIGSITLS 275
Query: 337 YDSANLTTPDIKWLGIRPSDL---DKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
Y+S L TP K++G+ +D+ D ++ E + +++++ + LE+ KK P
Sbjct: 276 YESERLATPRAKFIGVMMTDVFGDDVFR--EMLKDKDSKKELGSIARGLEK-LAKKKPYL 332
Query: 394 --VEELNLMVKTKQKAEIQALSSFGFQ 418
E N ++K KQ+ +A+ G+
Sbjct: 333 TEAERRNYIIKAKQRDLERAVELIGYN 359
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+ P WV EL + KT K EI+A++S G ++L++ Y+P K+ DW+
Sbjct: 387 QTPEWVRELCVFFKTLSKLEIEAMASKGLKFLADHYIPEKISTGDWI 433
>gi|282163829|ref|YP_003356214.1| type II DNA topoisomerase VI subunit A [Methanocella paludicola
SANAE]
gi|282156143|dbj|BAI61231.1| type II DNA topoisomerase VI subunit A [Methanocella paludicola
SANAE]
Length = 366
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 186/368 (50%), Gaps = 21/368 (5%)
Query: 86 LSAVQSTIETLILQIARSIL----AGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRP 141
++A I + Q+ +L AG S + R+ SN Y + I L D R
Sbjct: 1 MTARSKEIVEKLTQVGEDVLGDIKAGKNPSIDITMRSLSNVYYDEKSGLIKLGDDKQKRY 60
Query: 142 FASLSTVRKSTITVKILSLIHQLCLRNI-HVTKRDLFYT--------DVKLFQDQTQSDA 192
+ +L +K T+ I I L ++ ++ R LFYT F Q +SD
Sbjct: 61 YFNLGQAKKFLQTMLIAKQIKILLEQDKPALSIRQLFYTLKHEIPGAGENTFDLQEESDP 120
Query: 193 VLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDN-GDMIDCTKMGMGGKAIPPNID--- 248
+++D+ + R LN+IA GV+ G ++ D GD++D TKMG G A+PP ++
Sbjct: 121 IIEDMELVTNSLREELNLIATPNGVLSGPMVVEDKTGDVLDFTKMGSAGGAVPPIVEDDF 180
Query: 249 -RVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL 307
+ +M +D +IL+VEK A + L +++++ + C+++T KGQP A R L + E
Sbjct: 181 FHIKEMSAD--YILVVEKYAVWNLLNQEKYWKKNNCLLLTGKGQPARAERRLLARFGEEY 238
Query: 308 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR 367
K+P+ D DP+G I SVY GS N+++ S P K++G+ D+ ++ IP
Sbjct: 239 KIPIYVFTDMDPWGYYIYSVYKSGSINLAFFSEKAACPRAKYIGLSVKDVREFDIPRSSW 298
Query: 368 LPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPL 427
+ + ++D K +++ D+ KK+ W +EL + K K E AL S ++ + YLP
Sbjct: 299 VKLNDEDFKRMEEIASYDWFKKDK-WQKELADLKKFGYKIEQDALVSKSIEFTANNYLPA 357
Query: 428 KLQQKDWL 435
K++ KD+
Sbjct: 358 KIENKDYF 365
>gi|212223912|ref|YP_002307148.1| DNA topoisomerase VI subunit A [Thermococcus onnurineus NA1]
gi|212008869|gb|ACJ16251.1| type II DNA topoisomerase VI, subunit A [Thermococcus onnurineus
NA1]
Length = 386
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 193/374 (51%), Gaps = 18/374 (4%)
Query: 79 REVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIV-LKDKT 137
RE + V + +E ++ I +G F +P R SN +Y E R++ + DK
Sbjct: 13 RERFSYDPTKVLNKLEEYGRRVLEDIKSGKNPYFDIPMRGLSN-VYFDEKRRVIKMGDKL 71
Query: 138 TLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFY--------TDVKLFQDQTQ 189
+ R F +++ RK T+ I++ + +L H + R+ +Y T F+DQ +
Sbjct: 72 SRRYFLNVAHARKFMQTLLIMAYVKRLVSEGKHASLREAYYANKHTIPGTKENTFEDQRE 131
Query: 190 SDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDR 249
SD +++D+ +LG R +++ A +G + G ++ D D + +K+GMGG A+P ++
Sbjct: 132 SDPIIEDLERMLGVLREEMHLTADRRGYIYGDIVIRDGEDEFNTSKLGMGGWAVPGTVEH 191
Query: 250 VGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKL 309
+ ++ + + L+VE A RL E++F + +I+ +GQ R + ++ E L
Sbjct: 192 LQFVEVNVDYALVVETAAMADRLIEEKFPKKENALIIATQGQASRGVRRLIHRLHYEEGL 251
Query: 310 PVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY---KIPEQC 366
P++ D DPYG I S GS N++Y S L TP+ K++G+ D+++Y + E+
Sbjct: 252 PIIVFTDGDPYGWYIYSTIKQGSINLAYLSEKLATPEAKFVGMTMDDIERYGLKNVTEKL 311
Query: 367 R-LPMTEQDIKTG--KDLLEEDFVK--KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLS 421
+ +P ++ TG K ++EE +N W +L L +K + E QAL++ ++++
Sbjct: 312 KGIPPNKKGGPTGDYKRIIEEMNYPWFQNKEWQRQLQLALKMGVRIEQQALANKSLEFVA 371
Query: 422 EVYLPLKLQQKDWL 435
+ YLP K+ + L
Sbjct: 372 KKYLPEKINNGELL 385
>gi|341581302|ref|YP_004761794.1| DNA topoisomerase VI subunit A [Thermococcus sp. 4557]
gi|340808960|gb|AEK72117.1| DNA topoisomerase VI subunit A [Thermococcus sp. 4557]
Length = 386
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 192/374 (51%), Gaps = 18/374 (4%)
Query: 79 REVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIV-LKDKT 137
RE + V + +E +I I AG F +P R N +Y E R++ + DK
Sbjct: 13 RERFSYDPTKVLTRLEEYGKKILEDIKAGKNPYFDIPMRGIGN-VYFDEKRRVIRMGDKL 71
Query: 138 TLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFY--------TDVKLFQDQTQ 189
+ R F +++ RK T+ I++ + +L N H + R+ +Y T F+DQ +
Sbjct: 72 SRRYFLNVAHARKFMQTLLIMAYVKRLVSENKHASLREAYYANKHTIPGTKENTFEDQRE 131
Query: 190 SDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDR 249
SD +++D+ ++G R +++ A +G + G ++ D D + +K+GMGG A+P ++
Sbjct: 132 SDPIIEDLERMMGVLREEMHLTADRRGYIYGDIVIRDGEDEFNTSKLGMGGWAVPGTVEH 191
Query: 250 VGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKL 309
+ ++ + + L+VE A RL E++F + +I+ +GQ R + ++ E L
Sbjct: 192 LQFVEVNVDYALVVETAAMADRLIEEKFPKKENALIIATQGQASRGVRRLIHRLHYEEGL 251
Query: 310 PVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY---KIPEQC 366
P++ D DPYG I S GS N++Y S L TP+ K++G+ D+++Y + E+
Sbjct: 252 PIIVFTDGDPYGWYIYSTIKQGSINLAYLSDKLATPEAKFVGMTMDDIERYGLKNVTEKL 311
Query: 367 R-LPMTEQDIKTG--KDLLEEDFVK--KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLS 421
+ +P ++ T K +LEE +N W +L + +K + E QAL++ ++++
Sbjct: 312 KGIPPNKKGGPTADYKRILEEMEYPWFQNKEWQRQLKMAIKMGVRIEQQALANKSLEFVA 371
Query: 422 EVYLPLKLQQKDWL 435
+ YLP K+ + L
Sbjct: 372 KKYLPEKINNGELL 385
>gi|329766434|ref|ZP_08257978.1| DNA topoisomerase VI subunit A [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|393795494|ref|ZP_10378858.1| DNA topoisomerase VI subunit A [Candidatus Nitrosoarchaeum limnia
BG20]
gi|329137033|gb|EGG41325.1| DNA topoisomerase VI subunit A [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 368
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 171/326 (52%), Gaps = 12/326 (3%)
Query: 112 FQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHV 171
F +PSR+ SN +Y +L + +L + +R + S +R T + + ++L
Sbjct: 43 FSIPSRSVSNIVYDKKLRQYILGNSAAVRSSRNSSQLRSFTQLMWLAFFANRLTQEKKSS 102
Query: 172 TKRDLFYTDVKL---FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNG 228
T RD++Y+ F+DQ++SD ++ D+ +L R ++ E+ + G L
Sbjct: 103 TLRDVYYSSQAFEIEFEDQSESDNIIVDLEAVLSKPREDFHIFPEERSSIFGDLNIEYTI 162
Query: 229 DMIDCTKMGMG----GKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCI 284
+ KM + G AI P++ M + A ++ +EK + R E++ +F I
Sbjct: 163 PGYEGKKMNLSNHPDGYAIGPSLTTAELMDTSAEIVIAIEKGGLFTRFVEEQVDKKFKSI 222
Query: 285 IVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTT 344
I+ GQ +TR L+++ E+ LPV+ L D D YG I V GS N ++ LT
Sbjct: 223 IINTGGQAPRSTRTLLKRLHDEMGLPVIVLTDGDVYGEHIAMVIKSGSANAAH-LRELTV 281
Query: 345 PDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTK 404
PD KW+G+ +D++K+K+P +PMTE DIK D L+ D + W +EL++ +K K
Sbjct: 282 PDAKWVGVWATDIEKFKLPT---IPMTESDIKRCYD-LQNDPRYQEGIWKKELDVFLKIK 337
Query: 405 QKAEIQALSSFGFQYLSEVYLPLKLQ 430
+KAE++A S +G +++ YLP KL+
Sbjct: 338 RKAELEAFSKYGLTNITDKYLPQKLE 363
>gi|221504024|gb|EEE29701.1| meiotic recombination protein SPO11, putative [Toxoplasma gondii
VEG]
Length = 342
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 165/312 (52%), Gaps = 12/312 (3%)
Query: 125 VPELDRIVLKDKTT-LRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKL 183
V L R+ ++T LR F ++K T + +L IH L + N T+R+LFY V +
Sbjct: 42 VDHLTRLTKAERTERLRTFG----IKKLTWVLSLLDQIHGLLMTNRAATQRELFYGLVNV 97
Query: 184 FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAI 243
F Q Q +A L + L R SLNV A++KG+V G L F +DC + G G I
Sbjct: 98 FDTQAQVNAQLQQIVSWLEIPRDSLNVFASQKGLVAGMLTFVKGSLTLDCRRTGT-GVLI 156
Query: 244 PPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKM 303
+ V ++S A +I++VEKDA + L E + +N PCI++T KG PD TR LR +
Sbjct: 157 SETLVEVDRLESHASYIIVVEKDAIFQTLCEQQIWNIIPCILITGKGFPDFVTRKLLRCL 216
Query: 304 KMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIP 363
+M L + V DP+G+ I Y GS+ +++ + + W+G+ DL+ ++P
Sbjct: 217 QMSLNIEVGRYF--DPHGISIFLSYQHGSR--AFEGPLVRCAVLHWIGLCFEDLE--QLP 270
Query: 364 EQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEV 423
RLP+ +D K LL ++ + + M++ K EI+A++ GF+YL+
Sbjct: 271 VDVRLPLLSRDRALLKSLLVHPKIRDCERLQAQCSFMMEHDTKFEIEAITCLGFEYLARY 330
Query: 424 YLPLKLQQKDWL 435
Y+P K+ ++ W+
Sbjct: 331 YIPSKILKRTWI 342
>gi|150399499|ref|YP_001323266.1| DNA topoisomerase VI subunit A [Methanococcus vannielii SB]
gi|150012202|gb|ABR54654.1| DNA topoisomerase (ATP-hydrolyzing) [Methanococcus vannielii SB]
Length = 365
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 160/305 (52%), Gaps = 20/305 (6%)
Query: 147 TVRKSTI---TVKILSLIHQLCLRNIHVTKRDLFYTDVKL----FQDQTQSDAVLDDVAC 199
TV ++ I T+K++ L N T R+ +Y F DQ S+ V++D+
Sbjct: 64 TVNQAKIFAQTIKMMEFSKSLLDTNDFSTLREAYYVSKNWGEARFDDQQPSNGVIEDIEA 123
Query: 200 ILGCTRSSLNVIAAEKGV-VVGRLIFSD---NGD--MIDCTKMGMGGKAIPPNIDRVGDM 253
R L I E G VVG L D +G+ IDC K+G G +IP ++ ++ +
Sbjct: 124 ASEHLREDLGFIPEEDGAAVVGPLKIRDRTADGEEIRIDCAKLGSGAYSIPNDVTKL-EF 182
Query: 254 QSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLA 313
+ A FIL +E + RL + F+N+ CI+++ KG P ATR F++++ E KLP+L
Sbjct: 183 DTKAEFILAIETAGMFARLNAEGFWNKHNCILISLKGVPARATRRFIKRLNEEHKLPILV 242
Query: 314 LVDSDPYG-LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTE 372
D DPYG L I GS + + L PD + +G+ P D+ Y +P P+ +
Sbjct: 243 FTDGDPYGYLNIYRTLKVGSGKAVHLADKLAIPDARLIGVTPQDILDYDLPTH---PLKD 299
Query: 373 QDIKTGKDLLE-EDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ- 430
DIK KD L+ +DFV+ P W + LN M K +AE Q+L+ +G +Y+ E YLP K++
Sbjct: 300 HDIKRLKDGLKNDDFVRSFPEWQKALNQMADGKVRAEQQSLAKYGLKYVVEEYLPTKVED 359
Query: 431 QKDWL 435
Q WL
Sbjct: 360 QSTWL 364
>gi|223478247|ref|YP_002582502.1| DNA topoisomerase VI subunit A [Thermococcus sp. AM4]
gi|214033473|gb|EEB74300.1| DNA topoisomerase VI subunit A [Thermococcus sp. AM4]
Length = 386
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 188/364 (51%), Gaps = 18/364 (4%)
Query: 89 VQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIV-LKDKTTLRPFASLST 147
V S +E + +I AG F +P+R +N +Y E R++ + DK + R F +++
Sbjct: 23 VLSKLEEYGRSVLEAIKAGKNPYFDIPTRGLNN-VYFDEKSRLIRMGDKLSRRYFLNVAH 81
Query: 148 VRKSTITVKILSLIHQLCLRNIHVTKRDLFY--------TDVKLFQDQTQSDAVLDDVAC 199
RK T+ I++ + +L H + R+ +Y T F+DQ +SD +++D+
Sbjct: 82 ARKFMQTLLIMAYVKRLVAEGKHASLREAYYANKHTIPGTKENTFEDQRESDPIIEDLER 141
Query: 200 ILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMF 259
+LG R +++ A +G + G ++ D D + +K+G GG A+P ++ + + + +
Sbjct: 142 MLGVLREEMHITADRRGYIYGDIVIRDGEDEFNASKLGSGGWAVPGTVEHIQFPEINVDY 201
Query: 260 ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDP 319
L+VE A RL E++F + +I+ +GQ R + ++ E LP++ D DP
Sbjct: 202 ALVVETAAMADRLIEEKFPKKEKALIIATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDP 261
Query: 320 YGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY---KIPEQCR-LPMTEQDI 375
YG I S GS N++Y S L TP+ K++G+ D+ +Y + E+ + +P ++
Sbjct: 262 YGWYIYSTIKQGSINLAYLSDKLATPEAKFVGMTMDDIKRYGLENVTEKLKGIPPNKKGG 321
Query: 376 KTG--KDLLEEDFVK--KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
TG K +LEE +N W +L + +K + E QAL++ +++++ YLP K+
Sbjct: 322 PTGDYKRILEEMEYPWFQNREWQRQLKMALKWGVRIEQQALANKSLEFVAKEYLPEKINS 381
Query: 432 KDWL 435
D L
Sbjct: 382 GDLL 385
>gi|297620010|ref|YP_003708115.1| DNA topoisomerase [Methanococcus voltae A3]
gi|297378987|gb|ADI37142.1| DNA topoisomerase (ATP-hydrolyzing) [Methanococcus voltae A3]
Length = 365
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 170/336 (50%), Gaps = 18/336 (5%)
Query: 113 QVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVT 172
+ P R+ SN + E L K R F +++ + T+K++ L N T
Sbjct: 34 KFPVRSLSNARFDDEKGTFTLMGKEKERTF-NVNQAKIFAQTIKMMEFSKSLLDTNDFST 92
Query: 173 KRDLFYTDVKL----FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSDN 227
R+ +Y F DQ S+ V++D+ R L + E G VVG L D
Sbjct: 93 LREAYYVSKNWGEARFDDQQPSNGVIEDLEAASDFLREDLGFMPEEDGASVVGPLKVIDK 152
Query: 228 GD-----MIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFP 282
+IDCTK+G G IP + + +++ A F+L +E + RL+ + F+ +
Sbjct: 153 TQDGQEIIIDCTKLGSGAYNIPNEVTNL-TLETTAEFVLAIETAGMFARLSAEGFWKKHN 211
Query: 283 CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYG-LKILSVYGCGSKNMSYDSAN 341
CI+V+ KG P ATR F++++ E KLP+L D DPYG L I GS + +
Sbjct: 212 CILVSLKGVPSRATRRFVKRLAEEKKLPILVFTDGDPYGYLNIYRTLKVGSGKAVHLADK 271
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLE-EDFVKKNPGWVEELNLM 400
L P+ + +G+ P D+ Y++P P+ + DIK KD L+ +DFVK W + L +M
Sbjct: 272 LAVPEARLIGVTPQDIVDYELPTH---PLKDHDIKRLKDGLKNDDFVKSFSDWQQALTMM 328
Query: 401 VKTKQKAEIQALSSFGFQYLSEVYLPLKLQ-QKDWL 435
+K +AE Q+L+ +G +Y+ E YLP K++ QK WL
Sbjct: 329 ANSKVRAEQQSLAKYGLKYVVEEYLPAKIEDQKTWL 364
>gi|150402606|ref|YP_001329900.1| DNA topoisomerase VI subunit A [Methanococcus maripaludis C7]
gi|150033636|gb|ABR65749.1| DNA topoisomerase (ATP-hydrolyzing) [Methanococcus maripaludis C7]
Length = 365
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 174/348 (50%), Gaps = 24/348 (6%)
Query: 104 ILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTI---TVKILSL 160
I+ G P R+ +N + E + K R + TV ++ I T+K++
Sbjct: 25 IIRGKRPKITFPIRSLANAKFDAEKGTFAILGKEKDR----MLTVNQAKIFAQTIKMMEF 80
Query: 161 IHQLCLRNIHVTKRDLFYTDVKL----FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKG 216
+L N T R+ +Y F DQ S+ V++D+ R L I E G
Sbjct: 81 SKELLDTNDFSTLREAYYVSKNWGEARFDDQQPSNGVIEDIEAASEYLREDLGFIPEEDG 140
Query: 217 V-VVGRLIFSDNGD-----MIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYI 270
V+G L D IDCTK+G G IP ++ ++ + + A FIL +E +
Sbjct: 141 AAVIGPLQIVDRAADGSEIKIDCTKLGSGAYNIPNDVTKL-EFNTKADFILAIETAGMFA 199
Query: 271 RLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYG-LKILSVYG 329
RL + F+++ CI+++ KG P ATR F++++ E KLP+L D DPYG L I
Sbjct: 200 RLNAEEFWSKHNCILISLKGVPARATRRFIKRLNEEHKLPILVFTDGDPYGYLNIYRTLK 259
Query: 330 CGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLE-EDFVK 388
GS + + L P+ + +G+ P D+ Y++P P+ + D+K KD L+ +DFV+
Sbjct: 260 VGSGKAVHLADKLAVPEARLIGVTPQDIVDYELPTH---PLKDHDVKRLKDGLKNDDFVR 316
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ-QKDWL 435
P W + LN M K +AE Q+L+ +G +Y+ E YLP K++ QK WL
Sbjct: 317 SFPEWQKALNQMADGKVRAEQQSLAKYGLKYVVEEYLPAKIEDQKTWL 364
>gi|57640733|ref|YP_183211.1| DNA topoisomerase VI subunit A [Thermococcus kodakarensis KOD1]
gi|90110665|sp|Q5JH82.1|TOP6A_PYRKO RecName: Full=Type II DNA topoisomerase VI subunit A
gi|57159057|dbj|BAD84987.1| type II DNA topoisomerase VI, subunit A [Thermococcus kodakarensis
KOD1]
Length = 385
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 183/354 (51%), Gaps = 18/354 (5%)
Query: 99 QIARSILAGNGFSFQVPSRASSNQLYVPELDRIV-LKDKTTLRPFASLSTVRKSTITVKI 157
+I I AG F +P R SN +Y E R++ + DK + R F +++ RK T+ I
Sbjct: 32 RILEDIKAGKNPHFDIPMRGLSN-VYFDEKSRLIKMGDKLSRRYFLNVAHARKFMQTLLI 90
Query: 158 LSLIHQLCLRNIHVTKRDLFY--------TDVKLFQDQTQSDAVLDDVACILGCTRSSLN 209
++ + +L H + R+ +Y T F+DQ++SD +++D+ + G R ++
Sbjct: 91 MAYVKRLVSEGKHASLREAYYANKHTIPGTRENTFEDQSESDPIIEDLERMFGVLREEMH 150
Query: 210 VIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAY 269
+ A +G + G ++ D D + +++G GG A+P ++ + + + + L+VE A
Sbjct: 151 ITADRRGYIYGDIVIRDGEDEFNASRLGSGGWAVPGTVEHIQFPEINVDYALVVETAAMA 210
Query: 270 IRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYG 329
RL E++F R +I+ +GQ R + ++ E LP++ D DPYG I S
Sbjct: 211 DRLIEEKFPKRENALIIATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDPYGWYIYSTIK 270
Query: 330 CGSKNMSYDSANLTTPDIKWLGIRPSDLDKY---KIPEQCR-LPMTEQDIKTG--KDLLE 383
GS N++Y S L TP+ K++G+ D+ KY + E+ + +P ++ TG K +LE
Sbjct: 271 QGSINLAYLSDKLATPESKFVGMTMDDIKKYGLENVTEKLKGIPPNKKGGPTGDYKRILE 330
Query: 384 EDFVK--KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
E +N W +L L +K + E QAL++ +++++ YLP K+ D L
Sbjct: 331 EMNYPWFQNKEWQRQLQLALKWGVRIEQQALANKSLEFVAKEYLPEKINNGDLL 384
>gi|224006946|ref|XP_002292433.1| spo11-like protein [Thalassiosira pseudonana CCMP1335]
gi|220972075|gb|EED90408.1| spo11-like protein [Thalassiosira pseudonana CCMP1335]
Length = 272
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 153/277 (55%), Gaps = 11/277 (3%)
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRS 206
T R T K+++ IHQL L N T R+++Y V F++Q + D + DVA IL R
Sbjct: 2 TDRTFTSITKVMAFIHQLLLSNRTTTTREVYYVFVTHFRNQKECDGTILDVAKILNVPRR 61
Query: 207 SLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKD 266
+L + A+ KG + GR ++ + I C G + + DA I+++EK+
Sbjct: 62 ALGLSASPKGELEGRSVYME----ISCLVNGFADDGVEIKV-----TSKDAKVIVVIEKE 112
Query: 267 AAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILS 326
Y +L+E+R ++ FPCI+VT KG PD+ATR + + EL +PV+ + DS+P+G+ +L+
Sbjct: 113 GVYNKLSEERIFDDFPCILVTGKGFPDLATRALVNTLHKELDIPVVGICDSNPFGISVLA 172
Query: 327 VYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYK--IPEQCRLPMTEQDIKTGKDLLEE 384
+Y C + M D T + W+G+RPS ++ + +P+ +T+ D K LL+E
Sbjct: 173 LYYCAGERMGVDGRMKYTVPMMWIGLRPSTVESLEDDLPKDVFQSLTDLDYKRIDSLLDE 232
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLS 421
D + N EE+ M ++ +K E++AL G Y+S
Sbjct: 233 DNLFLNEERYEEIVKMKESGKKVELEALYWLGSDYMS 269
>gi|159905619|ref|YP_001549281.1| DNA topoisomerase VI subunit A [Methanococcus maripaludis C6]
gi|159887112|gb|ABX02049.1| DNA topoisomerase (ATP-hydrolyzing) [Methanococcus maripaludis C6]
Length = 365
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 112/348 (32%), Positives = 177/348 (50%), Gaps = 24/348 (6%)
Query: 104 ILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTI---TVKILSL 160
I+ G P R+ +N + E + K R + TV ++ I T+K++
Sbjct: 25 IIRGKRPKLTFPIRSLANAKFDAEKGTFAILGKEKDR----MLTVNQAKIFAQTIKMMEF 80
Query: 161 IHQLCLRNIHVTKRDLFYTDVKL----FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKG 216
L N T R+ +Y F DQ S+ V++D+ R L I E G
Sbjct: 81 SKGLLDTNDFSTLREAYYVSKNWGEARFDDQQPSNGVIEDIEAASEYLREDLGFIPEEDG 140
Query: 217 V-VVGRLIFSD---NGD--MIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYI 270
V+G L D +G+ IDCTK+G G +IP ++ ++ + ++ A FIL +E +
Sbjct: 141 AAVIGPLRIVDRTADGEEIKIDCTKLGSGAYSIPNDVTKL-EFETKADFILAIETAGMFA 199
Query: 271 RLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYG-LKILSVYG 329
RL + F+++ CI+V+ KG P ATR F++++ E KLP+L D DPYG L I
Sbjct: 200 RLNAEGFWSKHNCILVSLKGVPARATRRFIKRLNEEHKLPILVFTDGDPYGYLNIYRTLK 259
Query: 330 CGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLE-EDFVK 388
GS + + L P+ + +G+ P D+ Y++P P+ + D+K KD L+ +DFVK
Sbjct: 260 VGSGKAVHLADKLAVPEARLIGVTPQDIIDYELPTH---PLKDHDVKRLKDGLKNDDFVK 316
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ-QKDWL 435
P W + LN M K +AE Q+L+ +G +Y+ E YLP K++ Q WL
Sbjct: 317 SFPEWQKALNQMADGKVRAEQQSLAKYGLKYVVEEYLPAKVEDQSTWL 364
>gi|386876676|ref|ZP_10118766.1| type IIB DNA topoisomerase [Candidatus Nitrosopumilus salaria BD31]
gi|386805513|gb|EIJ65042.1| type IIB DNA topoisomerase [Candidatus Nitrosopumilus salaria BD31]
Length = 368
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 172/326 (52%), Gaps = 12/326 (3%)
Query: 112 FQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHV 171
F +PSR+ SN +Y +L + +L + LR + S +R T + + ++L
Sbjct: 43 FSIPSRSVSNIVYDKKLRQYILGNNAALRSSRNSSQLRSFTQLMWLAFFANRLTKEKKSS 102
Query: 172 TKRDLFYTDVKL---FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNG 228
T RD++Y+ F+DQ++SD ++ D+ + R ++ E+ + G L
Sbjct: 103 TLRDVYYSSQAFAIEFEDQSESDNIIVDLEAVTSKPREDFHIFPEERSSIFGDLTIEYTI 162
Query: 229 DMIDCTKMGMG----GKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCI 284
+ M + G +I P++ + + A ++ +EK + R E++ +F I
Sbjct: 163 PGYEGKTMNLSNHPDGYSIGPSLTTAELVDTSAEIVIAIEKGGLFTRFVEEQIDKKFKSI 222
Query: 285 IVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTT 344
I+ GQ +TR L+++ E+KLPV+ L D D YG I V GS N ++ LT
Sbjct: 223 IINTGGQAPRSTRTLLKRLHDEMKLPVIVLTDGDVYGEHIAMVIKSGSANAAH-LRELTV 281
Query: 345 PDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTK 404
PD KW+G+ +D++KYK+P +PMTE DIK D L++D ++ W +EL++ ++ K
Sbjct: 282 PDAKWVGVWATDIEKYKLPT---IPMTESDIKRCYD-LQKDPRYQDGIWKKELDVFLRLK 337
Query: 405 QKAEIQALSSFGFQYLSEVYLPLKLQ 430
+KAE++A S +G +++ YLP KL+
Sbjct: 338 RKAELEAFSKYGLTNITDKYLPQKLE 363
>gi|340345432|ref|ZP_08668564.1| DNA topoisomerase (ATP-hydrolyzing) [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339520573|gb|EGP94296.1| DNA topoisomerase (ATP-hydrolyzing) [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 368
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 171/326 (52%), Gaps = 12/326 (3%)
Query: 112 FQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHV 171
F +PSR+ SN +Y +L + +L + +R + S +R T + + ++L
Sbjct: 43 FSIPSRSVSNIVYDKKLRQYILGNSAAVRSSRNSSQLRSFTQLMWLAFFANRLTQEKKSS 102
Query: 172 TKRDLFYTDVKL---FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNG 228
T RD++Y+ F+DQ++SD ++ D+ +L R ++ E+ + G L
Sbjct: 103 TLRDVYYSSQAFAIEFEDQSESDNIIVDLEAVLSKPREDFHIFPEERSSIFGDLNIEYTI 162
Query: 229 DMIDCTKMGMG----GKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCI 284
+ KM + G AI P++ + + A ++ +EK + R E++ +F I
Sbjct: 163 PGYEGKKMNLSNHPDGYAIGPSLTTAELLDTSAEIVIAIEKGGLFTRFVEEQVDKKFKSI 222
Query: 285 IVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTT 344
I+ GQ +TR L+++ EL LPV+ L D D YG I V GS N ++ LT
Sbjct: 223 IINTGGQAPRSTRTLLKRLHDELGLPVIILTDGDVYGEHIAMVIKSGSANAAH-LRELTV 281
Query: 345 PDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTK 404
PD KW+G+ +D++K+K+P +PMTE DIK D L+ D + W +EL++ +K K
Sbjct: 282 PDAKWVGVWATDIEKFKLPT---IPMTESDIKRCYD-LQTDPRYQEGIWKKELDVFLKIK 337
Query: 405 QKAEIQALSSFGFQYLSEVYLPLKLQ 430
+KAE++A S +G +++ YLP KL+
Sbjct: 338 RKAELEAFSKYGLTNITDKYLPQKLE 363
>gi|148643016|ref|YP_001273529.1| DNA topoisomerase VI subunit A [Methanobrevibacter smithii ATCC
35061]
gi|222445253|ref|ZP_03607768.1| hypothetical protein METSMIALI_00881 [Methanobrevibacter smithii
DSM 2375]
gi|261350188|ref|ZP_05975605.1| type II DNA topoisomerase VI subunit A [Methanobrevibacter smithii
DSM 2374]
gi|148552033|gb|ABQ87161.1| type II DNA topoisomerase VI, subunit A [Methanobrevibacter smithii
ATCC 35061]
gi|222434818|gb|EEE41983.1| type IIB DNA topoisomerase [Methanobrevibacter smithii DSM 2375]
gi|288860974|gb|EFC93272.1| type II DNA topoisomerase VI subunit A [Methanobrevibacter smithii
DSM 2374]
Length = 366
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 165/324 (50%), Gaps = 8/324 (2%)
Query: 111 SFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIH 170
S +VPSR +SN +Y VL D+ R ++ +RK V + + L R
Sbjct: 44 SVKVPSRGTSNIVYDEAKRYYVLGDRYGRRSLGNVKQIRKLGQMVYVANFCKDLVQREKT 103
Query: 171 VTKRDLFYTDVKL---FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
T R+++Y F+ Q +S+ V +D+ LG TR L ++ E G V G L D
Sbjct: 104 ATIREMYYVSEGWGISFKTQQESNIVGEDLEVTLGTTREDLGLMPEEDGASVYGDLTLKD 163
Query: 227 NGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIV 286
I+ K G G I P ID+V + + ++ VE + R+ +++ Y+RF +IV
Sbjct: 164 GDVEINALKAGKSGYTISPTIDQVDFLDCNVDRVIAVETMGMFHRMVQEKAYDRFNTLIV 223
Query: 287 TAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPD 346
KGQ ATR F++++ EL LPV D DP+G I V GS +++ + +L TPD
Sbjct: 224 GLKGQAARATRRFIKRVNEELHLPVYICNDGDPWGFHIAQVIISGSAKLAHVNHDLATPD 283
Query: 347 IKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQK 406
K++G+ SD+ Y +P + + D+ K+L +D K+ W E+ M+K +K
Sbjct: 284 AKFMGVTASDIINYDLPTDN---LKDVDVMRLKELA-KDPRYKSDFWQTEIKKMLKIGKK 339
Query: 407 AEIQALSSFGFQYLSEVYLPLKLQ 430
AE Q+ S +G +Y+ + Y P KL+
Sbjct: 340 AEQQSFSKYGLEYVVDTYFPEKLE 363
>gi|134045187|ref|YP_001096673.1| DNA topoisomerase VI subunit A [Methanococcus maripaludis C5]
gi|132662812|gb|ABO34458.1| Spo11/DNA topoisomerase VI, subunit A-like protein [Methanococcus
maripaludis C5]
Length = 365
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 177/348 (50%), Gaps = 24/348 (6%)
Query: 104 ILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTI---TVKILSL 160
I+ G P R+ +N + E + K R + TV ++ I T+K++
Sbjct: 25 IIRGKRPKITFPIRSLANAKFDAEKGTFAILGKEKDR----MLTVNQAKIFAQTIKMMEF 80
Query: 161 IHQLCLRNIHVTKRDLFYTDVKL----FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKG 216
+L N T R+ +Y F DQ S+ V++D+ R L I E G
Sbjct: 81 SKELLDTNDFSTLREAYYVSKNWGEARFDDQQPSNGVIEDIEAASEHLREDLGFIPEEDG 140
Query: 217 V-VVGRLIFSD---NGD--MIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYI 270
V+G L +D +G+ IDCTK+G G IP ++ ++ + ++ A FIL +E +
Sbjct: 141 AAVIGPLRIADKTADGEEIKIDCTKLGSGAYNIPNDVTKL-EFETKADFILAIETAGMFA 199
Query: 271 RLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYG-LKILSVYG 329
RL + F+ + CI+++ KG P ATR F++++ E KLP+L D DPYG L I
Sbjct: 200 RLNAEEFWKKHNCILISLKGVPARATRRFIKRLNEEHKLPILVFTDGDPYGYLNIYRTLK 259
Query: 330 CGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLE-EDFVK 388
GS + + L P+ + +G+ P D+ Y++P P+ + D+K KD L+ +DFV+
Sbjct: 260 VGSGKAVHLADKLAVPESRLIGVTPQDIVDYELPTH---PLKDHDVKRLKDGLKNDDFVR 316
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ-QKDWL 435
P W + LN M K +AE Q+L+ +G +Y+ E YLP K++ K WL
Sbjct: 317 SFPEWQKALNQMADGKVRAEQQSLAKYGLKYVVEEYLPAKIEDSKTWL 364
>gi|350404734|ref|XP_003487202.1| PREDICTED: meiotic recombination protein SPO11-like [Bombus
impatiens]
Length = 401
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 105/316 (33%), Positives = 173/316 (54%), Gaps = 30/316 (9%)
Query: 135 DKTTLRPFASLSTVR---KSTITVKILSLIHQLCLRNIHVTKRDLFYTDVK------LFQ 185
++ +R + +T R K +T+ +++ H+L + N +T+R L+Y D+K L
Sbjct: 101 ERNEIRTVINFATKRGKDKFALTMTVMAAAHRLLIINSTITRRSLYY-DLKNDKTLNLVP 159
Query: 186 DQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFS-DNGDMIDCTKMGMGGKAIP 244
+Q D ++ VA +L C+ LN++ KG+V G L F+ N +IDCT G G IP
Sbjct: 160 EQWYLDQAVNHVANLLNCSPWELNLLPTSKGLVAGELTFTLTNNRIIDCTVPG--GVLIP 217
Query: 245 PNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMK 304
NI V +++ A +L+VEKDA + +L +D + CI+VT KG PDV TR+ ++ +
Sbjct: 218 HNISEVISVRTRAKMVLIVEKDAVFQKLLKDDCTSSLSCILVTGKGYPDVTTRMLVKLLS 277
Query: 305 MELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPE 364
+L+LPV +VD+DP+G+ I+ VY GS +S + L ++WLGI PS+L +
Sbjct: 278 EKLELPVYIIVDADPFGVDIMCVYRFGSAALSRERKCLACSKVRWLGIHPSELLALGVNT 337
Query: 365 QCRLPMTEQDIK-----TGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQY 419
+P+TE D G+ + + F K EL +M KAEI+ + S ++
Sbjct: 338 ---VPLTEFDFSRLMALEGRPYMTDAFRK-------ELEIM--RTGKAEIENVYSSSGRF 385
Query: 420 LSEVYLPLKLQQKDWL 435
L+ YLP K++ D++
Sbjct: 386 LAATYLPCKIKGNDYI 401
>gi|325960094|ref|YP_004291560.1| type 2 DNA topoisomerase 6 subunit A [Methanobacterium sp. AL-21]
gi|325331526|gb|ADZ10588.1| Type 2 DNA topoisomerase 6 subunit A [Methanobacterium sp. AL-21]
Length = 358
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 178/351 (50%), Gaps = 12/351 (3%)
Query: 83 DLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPF 142
DL+++ + S + +I +A+ + + +VPSR +SN +Y + VL D+ R
Sbjct: 13 DLAVNKLTSLGDRIIDDVAKQTVP----AIRVPSRGTSNIVYDEDRRYYVLGDRYGQRSL 68
Query: 143 ASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKL---FQDQTQSDAVLDDVAC 199
++ ++K V + + L T R+++Y F DQ +S+ V +D+
Sbjct: 69 GNVKQIKKIGQMVYMANFCKGLVQTGKTATLREMYYVSEGWDIDFGDQQESNIVGEDLEV 128
Query: 200 ILGCTRSSLNVIAAEKGV-VVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAM 258
LG TR L ++ E G V G + D+ I+ +MG G I P ID V + +
Sbjct: 129 TLGITREDLGLMPEEDGASVYGDITLKDDDVEINAMRMGKSGYTISPTIDEVELLDHNVE 188
Query: 259 FILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSD 318
++ VE + R+ ++ Y +F +IV KGQ ATR FL+++ EL LPV D D
Sbjct: 189 RVIAVETMGMFHRMVQENAYKKFNTLIVGLKGQAARATRRFLKRVNEELGLPVYICNDGD 248
Query: 319 PYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTG 378
P+G I V GS +++ + L TP+ K+LG+ SD+ Y +P P+ + D+
Sbjct: 249 PWGFHIAMVIISGSAKLAHVNHELATPNAKFLGVTASDIVNYDLPTD---PLKDIDVLRL 305
Query: 379 KDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
K+L +D ++ W E+ M+K +KAE Q+ S +G +Y+ + Y+P KL
Sbjct: 306 KELY-KDPRYRDEFWKVEIKKMLKIGKKAEQQSFSKYGLEYVVDTYIPEKL 355
>gi|242399083|ref|YP_002994507.1| Type II DNA topoisomerase VI subunit A [Thermococcus sibiricus MM
739]
gi|242265476|gb|ACS90158.1| Type II DNA topoisomerase VI subunit A [Thermococcus sibiricus MM
739]
Length = 381
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 187/364 (51%), Gaps = 18/364 (4%)
Query: 89 VQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIV-LKDKTTLRPFASLST 147
V +E ++ I G VP+R SN +Y E DR++ + DKT+ R ++
Sbjct: 18 VLQQLERFGKKVLEEITRGRNPFIDVPTRGLSN-VYFDERDRLIKMGDKTSRRYLFHVAH 76
Query: 148 VRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKL--------FQDQTQSDAVLDDVAC 199
RK T+ I + I +L H + R+ +Y + F+DQ++SD +++D+
Sbjct: 77 ARKFMQTLLISAYIKRLVSEGKHASLREAYYANKHTIPGSKENTFEDQSESDPIIEDLER 136
Query: 200 ILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMF 259
+ G R +++ A +G + G ++ D D + +K+GMGG A+P ++ + + + +
Sbjct: 137 MFGVLREEMHITADRRGYIYGDVVIKDGEDEFNASKLGMGGWAVPGTVEHIEFPEINVDY 196
Query: 260 ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDP 319
+L+VE A RL E+++ + ++V +GQ R + ++ E LP++ D DP
Sbjct: 197 VLVVETAAMADRLIEEKYPKKEKALVVATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDP 256
Query: 320 YGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY---KIPEQCR-LPMTEQDI 375
YG I S GS N++Y S L TP+ K++G+ D+ KY + E+ + +P ++
Sbjct: 257 YGWYIYSTIKQGSINLAYLSEKLATPEAKFVGMTMDDIKKYGLENVTEKLKGIPPNKKGG 316
Query: 376 KTG--KDLLEEDFVK--KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
TG K ++EE +N W +L L ++ + E QAL++ +++++ YLP K+
Sbjct: 317 PTGDYKRIIEEMNYPWFQNKEWQRQLKLALEWGVRIEQQALANKSLEFVAKEYLPEKIGN 376
Query: 432 KDWL 435
++ L
Sbjct: 377 EELL 380
>gi|383320074|ref|YP_005380915.1| DNA topoisomerase VI, subunit A [Methanocella conradii HZ254]
gi|379321444|gb|AFD00397.1| DNA topoisomerase VI, subunit A [Methanocella conradii HZ254]
Length = 365
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 178/350 (50%), Gaps = 17/350 (4%)
Query: 100 IARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITV---- 155
+ + AG S + R+ +N Y + I L D+ R + +L+ +K T+
Sbjct: 18 VLEDVEAGKNPSLDITIRSLNNVYYDEKSGLIKLGDEKQKRYYFNLAQAKKFLQTILIAK 77
Query: 156 KILSLIHQ----LCLRNIHVT-KRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNV 210
+I +L+ Q L +R + T K ++ T F Q +SD +++D+ + R LN+
Sbjct: 78 QIKALLEQDKPALSIRQLFYTLKHEIPGTGENTFDVQEESDPIIEDMELMTDSLREELNL 137
Query: 211 IAAEKGVVVGRLIFSDN-GDMIDCTKMGMGGKAIPPNID----RVGDMQSDAMFILLVEK 265
IA GV+ G +I D GD++D TKMG G A+PP ++ + +M +D +IL+VEK
Sbjct: 138 IATPNGVLAGPMIVEDKTGDVLDFTKMGSAGGAVPPIVEDDYFHIKEMSAD--YILVVEK 195
Query: 266 DAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKIL 325
A + L +++++ + C+++T KGQP A R L + E K+P+ D DP+G I
Sbjct: 196 YAVWNLLNQEKYWKKNNCLLLTGKGQPARAERRLLARFGEEYKIPIYVFTDMDPWGYYIY 255
Query: 326 SVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEED 385
SVY GS N+++ S P K+LG+ D+ + IP + + E+D K +++
Sbjct: 256 SVYKSGSINLAFFSEKAACPRAKYLGLSVKDVMDFDIPRSSWVKLNEEDFKRMEEIAAYP 315
Query: 386 FVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+ KK W EL + K K E AL S ++ + YLP K+ D+
Sbjct: 316 WFKKER-WQRELADLKKFGYKIEQDALVSKSIEFTANNYLPTKISNNDYF 364
>gi|440797878|gb|ELR18952.1| DNA topoisomerase 6 subunit A, putative [Acanthamoeba castellanii
str. Neff]
Length = 464
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 147/286 (51%), Gaps = 46/286 (16%)
Query: 156 KILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEK 215
++L L+H+L + T+R+ VA +L C R +L V A+E+
Sbjct: 181 RVLELVHELLSQGKQATQRE--------------------KVASLLNCLRGNLGVTASER 220
Query: 216 GVVVGRLIFSDNGDMIDCTKMGMGGKAIPPN-IDRVGDMQSDAMFILLVEKDAAYIRLAE 274
G ++G + + + G +DC + G G I N + + D++SDA FI++VEKDA + RLAE
Sbjct: 221 GTIIGCVQWQEKGRTVDCRRGGQSGHLISGNALAGMHDIKSDARFIIVVEKDAVFQRLAE 280
Query: 275 DRFYNRFPCIIVTA------------------------KGQPDVATRLFLRKMKMELKLP 310
DR ++ PCI++TA +G PD+ATR L+++ EL+LP
Sbjct: 281 DRVFDTLPCILITASTATVPINLAQVDTSNQKAHCAETEGFPDMATRGLLKRLHEELRLP 340
Query: 311 VLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPM 370
V+ L D +P G+ + Y GS +S +L T DIKWLG+ DL++ +P C
Sbjct: 341 VVGLFDWNPGGMGVYITYRYGSVKSGLES-HLHTVDIKWLGLCWDDLERMHLPSSCFQDQ 399
Query: 371 TEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFG 416
TE+D + + + +K NP EL M++ K EIQALS G
Sbjct: 400 TERDRRRIRSIQASGCLKDNPRCERELEKMLEAGVKVEIQALSHLG 445
>gi|198457624|ref|XP_002138430.1| GA24396 [Drosophila pseudoobscura pseudoobscura]
gi|198136050|gb|EDY68988.1| GA24396 [Drosophila pseudoobscura pseudoobscura]
Length = 333
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 186/351 (52%), Gaps = 30/351 (8%)
Query: 93 IETLILQIARSILAGNGFSFQVP-----SRASSNQLYVPELDRIVLKDKTTLRPFASLST 147
+E +++++ S++ +F VP SR S N R+ ++ + F
Sbjct: 5 VEGIVVRLLASLVLHGDATFMVPRMGPVSRDSGNG---NGYRRVSYNNRRSRHRFC---- 57
Query: 148 VRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSS 207
+ V +L+ IH+L + T R L+Y+D +L + Q A DV IL + +
Sbjct: 58 -----LVVYMLAKIHRLQVNGGSYTVRGLYYSDPQLIRTQRHIAAARLDVCHILNTSPTR 112
Query: 208 LNVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKD 266
L V++A KG++ G + + NGD++DC G +P + ++V + + A F+L+VEK+
Sbjct: 113 LGVLSASKGLMAGDIRMLMTNGDVLDCNVYS-GAIILPTDTEKVERIVTQADFVLVVEKE 171
Query: 267 AAYIRLAEDRFYNRFP--CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
+ + L + F CI+VT KG PD +TR L ++ E LP LVD+DP+G++I
Sbjct: 172 SVFESLLARDLFGTFGRRCILVTGKGYPDCSTRRILHRLSTECHLPAYILVDADPFGIEI 231
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
+ VY GS++MS+ S +L TP ++W+G+ PS++ + ++ D K D+L
Sbjct: 232 MLVYRLGSQSMSFTSGDLATPTLRWIGLHPSEIPAL---SSGAVALSSGDNKKIDDILAR 288
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
D++ PG +EL + + +QKAEI+++ F LS Y+P K+ + +L
Sbjct: 289 DYI--GPGVRQELRSLQQIQQKAEIESVIDF----LSTDYIPNKINRNLFL 333
>gi|240103483|ref|YP_002959792.1| DNA topoisomerase VI subunit A [Thermococcus gammatolerans EJ3]
gi|239911037|gb|ACS33928.1| Type II DNA topoisomerase VI, subunit A (Top6A) [Thermococcus
gammatolerans EJ3]
Length = 386
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 187/364 (51%), Gaps = 18/364 (4%)
Query: 89 VQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIV-LKDKTTLRPFASLST 147
V S +E + +I +G F +P R +N +Y E R++ + DK + R F +++
Sbjct: 23 VLSKLEEYGRSVLEAIKSGKNPYFDIPMRGLNN-VYFDEKSRLIKMGDKLSRRYFLNVAH 81
Query: 148 VRKSTITVKILSLIHQLCLRNIHVTKRDLFY--------TDVKLFQDQTQSDAVLDDVAC 199
RK T+ I++ + +L H + R+ +Y T F+DQ +SD +++D+
Sbjct: 82 ARKFMQTLLIMAYVKRLVSEGKHASLREAYYANKHTIPGTRENTFEDQRESDPIIEDLER 141
Query: 200 ILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMF 259
+LG R +++ A +G + G ++ D D + +K+G GG A+P ++ + + + +
Sbjct: 142 MLGVLREEMHITADRRGYIYGDIVIRDGEDEFNASKLGSGGWAVPGTVEHIQFPEINVDY 201
Query: 260 ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDP 319
L+VE A RL E++F + +I+ +GQ R + ++ E LP++ D DP
Sbjct: 202 ALVVETAAMADRLIEEKFPKKENALIIATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDP 261
Query: 320 YGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY---KIPEQCR-LPMTEQDI 375
YG I S GS N++Y S L TP+ +++G+ D+ +Y + E+ + +P ++
Sbjct: 262 YGWYIYSTIKQGSINLAYLSDKLATPEARFVGMTMDDIKRYGLENVTEKLKGIPPNKKGG 321
Query: 376 KTG--KDLLEEDFVK--KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
TG K +LEE +N W +L L +K + E QAL++ +++++ YLP K+
Sbjct: 322 PTGDYKRILEEMEYPWFQNREWQRQLKLALKWGVRIEQQALANKSLEFVAKEYLPEKINS 381
Query: 432 KDWL 435
D L
Sbjct: 382 GDLL 385
>gi|195150845|ref|XP_002016361.1| GL10528 [Drosophila persimilis]
gi|194110208|gb|EDW32251.1| GL10528 [Drosophila persimilis]
Length = 333
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 185/351 (52%), Gaps = 30/351 (8%)
Query: 93 IETLILQIARSILAGNGFSFQVP-----SRASSNQLYVPELDRIVLKDKTTLRPFASLST 147
+E +++Q+ S++ +F VP SR S N R+ ++ + F
Sbjct: 5 VEGIVVQLLASLVLHGDATFMVPRMGPVSRDSGN---ANGYRRVSYNNRRSRHRFC---- 57
Query: 148 VRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSS 207
+ V +L+ IH+L + T R L+Y+D +L + Q A DV +L +
Sbjct: 58 -----LVVYMLAKIHRLQVNGGSYTVRGLYYSDPQLIRTQRHIAAARLDVCHMLNTSPIR 112
Query: 208 LNVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKD 266
L V++A KG++ G + + NGD++DC G +P + ++V + + A F+L+VEK+
Sbjct: 113 LGVLSASKGLMTGDIRMLMTNGDVLDCNVYS-GAIILPTDTEKVERIVTQADFVLVVEKE 171
Query: 267 AAYIRLAEDRFYNRFP--CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
+ + L + F CI+VT KG PD +TR L ++ E LP LVD+DP+G++I
Sbjct: 172 SVFESLLARDLFGTFGRRCILVTGKGYPDCSTRRILHRLSTECHLPAYILVDADPFGIEI 231
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
+ VY GS++MS+ S +L TP ++W+G+ PS++ + ++ D K D+L
Sbjct: 232 MLVYRLGSQSMSFTSGDLATPTLRWIGLHPSEIPAL---SSGAVALSSGDNKKIDDILAR 288
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
D++ PG +EL + + +QKAEI+++ F LS Y+P K+ + +L
Sbjct: 289 DYI--GPGVRQELRSLQQIQQKAEIESVIDF----LSTDYIPNKINRNLFL 333
>gi|410720325|ref|ZP_11359681.1| DNA topoisomerase VI, subunit A [Methanobacterium sp. Maddingley
MBC34]
gi|410601107|gb|EKQ55627.1| DNA topoisomerase VI, subunit A [Methanobacterium sp. Maddingley
MBC34]
Length = 351
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 169/336 (50%), Gaps = 10/336 (2%)
Query: 100 IARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILS 159
I + N + +VPSR +SN +Y E VL D+ R ++ + K V + +
Sbjct: 18 ILEDVHQNNVPAIKVPSRGTSNIVYDTEKRYYVLGDRYGKRSLGNVKQITKIGQMVYVAN 77
Query: 160 LIHQLCLRNIHVTKRDLFYT----DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEK 215
L R T R+++Y DV F DQ +S+ V +D+ LG TR L ++ E
Sbjct: 78 FCKDLVRRGKTATLREMYYVSEGWDVD-FGDQQESNIVGEDLEVTLGMTREDLGLMPEED 136
Query: 216 GV-VVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAE 274
G V G + D+ I+ + G G I P ID + + D ++ VE + RL +
Sbjct: 137 GASVYGNITLQDDDVEINALRAGKSGYTISPTIDDIKFLDHDVKRVIAVETMGMFHRLVQ 196
Query: 275 DRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKN 334
+ Y +F +IV KGQ ATR FL+++ EL LPV D DP+G I V GS
Sbjct: 197 ENAYKKFDTLIVGLKGQAARATRRFLKRVNEELNLPVYICNDGDPWGFHIAMVIISGSAK 256
Query: 335 MSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWV 394
+++ + L TPD K+LG+ SD+ Y +P P+ + D+ K+ L +D K+ W
Sbjct: 257 LAHVNHQLATPDAKFLGVTASDIINYDLPTD---PLKDIDVLRLKE-LSKDPRYKDEAWQ 312
Query: 395 EELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
E+ M+K +KAE Q+ S +G +Y+ + YLP KL+
Sbjct: 313 MEIKKMIKIGKKAEQQSFSKYGLEYVVDTYLPEKLE 348
>gi|161528915|ref|YP_001582741.1| DNA topoisomerase VI subunit A [Nitrosopumilus maritimus SCM1]
gi|160340216|gb|ABX13303.1| DNA topoisomerase (ATP-hydrolyzing) [Nitrosopumilus maritimus SCM1]
Length = 370
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 171/326 (52%), Gaps = 12/326 (3%)
Query: 112 FQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHV 171
F +PSR+ SN +Y +L + +L + T LR + + +R T + + ++L
Sbjct: 45 FSIPSRSVSNIVYDKKLRQYILGNSTALRSAKNSAQLRSFTQLMWLAFFANRLTQEKKSS 104
Query: 172 TKRDLFYTDVKL---FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNG 228
T RD++Y+ F DQ++SD ++ D+ + R ++ E+ + G L
Sbjct: 105 TLRDVYYSSQAFAIEFDDQSESDNIIVDLEAVTSRPREDFHIFPEERSSIFGDLNIEYTI 164
Query: 229 DMIDCTKMGMG----GKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCI 284
+ KM + G +I P++ + + A ++ +EK + R E++ +F I
Sbjct: 165 PGYEGKKMNLSNHPDGYSIGPSLTTAELVDTSAEIVIAIEKGGLFTRFVEEQVDKKFKSI 224
Query: 285 IVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTT 344
I+ GQ +TR L+++ E+ LPV+ L D D YG I V GS N ++ LT
Sbjct: 225 IINTGGQAPRSTRTLLKRLHDEMGLPVIILTDGDVYGEHIAMVIKSGSANAAH-LRELTV 283
Query: 345 PDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTK 404
PD KW+G+ +D++KYK+P +PMTE DIK D L++D ++ W +EL + ++ K
Sbjct: 284 PDAKWVGVWATDIEKYKLP---TIPMTESDIKRCYD-LQKDPRYESGIWKKELEVFLRLK 339
Query: 405 QKAEIQALSSFGFQYLSEVYLPLKLQ 430
+KAE++A + +G +++ YLP KL+
Sbjct: 340 RKAELEAFAKYGLTNITDKYLPQKLE 365
>gi|357620490|gb|EHJ72655.1| meiotic recombination protein spo11 [Danaus plexippus]
Length = 423
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 112/327 (34%), Positives = 177/327 (54%), Gaps = 14/327 (4%)
Query: 117 RASSNQLYVPELDRIVLKD----KTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVT 172
R SN +Y LDR+ LK KTT +++ + + V +L+ IH+L +NI VT
Sbjct: 102 RLWSNCIY--SLDRVTLKSMRNAKTTTLVYSNNEDKSRFNMIVFVLTKIHELLTKNITVT 159
Query: 173 KRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRL-IFSDNGDMI 231
+R+LFY +V F Q + D + D C+L T SL V+A KG++ G + +++ + ++
Sbjct: 160 RRELFYQNVSRFVSQIKLDTAVRDACCLLETTPWSLGVVATAKGLIAGPIKMYNRDSSVL 219
Query: 232 DCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKG 290
DC G G IP +I + ++ A +ILLVEKDA + +L ++ R P I++T KG
Sbjct: 220 DCNVAG--GTLIPQDIVGITKFETTAKYILLVEKDAIFQKLLDEGALIRLGPVILLTGKG 277
Query: 291 QPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWL 350
PDV TR L ++ EL+L LALVD+DP+G +I Y GS S+ S +L + L
Sbjct: 278 YPDVCTRQLLYRLVSELRLRALALVDADPHGYEIYLTYKYGSLAQSHLSDSLACTSLLLL 337
Query: 351 GIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPG--WVEELNLMVKTKQKAE 408
G R DL +P RL +T D + L+ ++ G E+L M++ KAE
Sbjct: 338 GARYQDLMTL-VPTAARLALTALDRRKLAALINRPYLNTPTGDPIKEDLKRMLERGLKAE 396
Query: 409 IQALSSFGFQYLSEVYLPLKLQQKDWL 435
++A+ + +S+ Y+P K+ D+L
Sbjct: 397 LEAVVPYSVA-MSDSYIPSKIIAADFL 422
>gi|409095996|ref|ZP_11216020.1| DNA topoisomerase VI subunit A [Thermococcus zilligii AN1]
Length = 385
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 180/353 (50%), Gaps = 16/353 (4%)
Query: 99 QIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKIL 158
++ I G F +P R +N + E I L DK + R F +++ RK T+ I+
Sbjct: 32 RVLEDIKRGKNPYFDIPMRGLNNVYFDEESRLIKLGDKLSRRYFLNVAHARKFMQTLIIM 91
Query: 159 SLIHQLCLRNIHVTKRDLFY--------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNV 210
+ + +L + H + R+ +Y T F+DQ++SD +++D+ + G R +N+
Sbjct: 92 AYVKRLVSEDKHASLREAYYANKHTIPGTHENTFEDQSESDPIIEDLERMFGVLREEMNL 151
Query: 211 IAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYI 270
A +G + G ++ D D + +K+G GG A+P ++ + + + + L+VE A
Sbjct: 152 TADRRGYIYGDIVIRDGEDEFNASKLGSGGWAVPGTVEHIQFSEINVDYALVVETAAMAD 211
Query: 271 RLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGC 330
RL E+++ + +I+ +GQ R + ++ E LP++ D DPYG I S
Sbjct: 212 RLIEEKYSKKENALIIATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDPYGWYIYSTIKL 271
Query: 331 GSKNMSYDSANLTTPDIKWLGIRPSDLDKY---KIPEQCR-LPMTEQDIKTG--KDLLEE 384
GS N++Y S L TP+ K++G+ D+ +Y + E+ + +P +++ TG K ++EE
Sbjct: 272 GSINLAYLSEKLATPEAKFVGMTMDDIKRYGLENVTEKLKGIPPSKKGGPTGDYKRIIEE 331
Query: 385 DFVK--KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+N W +L L + + E QAL++ +++++ YLP K+ D L
Sbjct: 332 MNYPWFQNEEWQRQLKLALDWGVRIEQQALANKSLEFVAKEYLPEKINNGDLL 384
>gi|340624748|ref|YP_004743201.1| DNA topoisomerase VI subunit A [Methanococcus maripaludis X1]
gi|339905016|gb|AEK20458.1| DNA topoisomerase VI subunit A [Methanococcus maripaludis X1]
Length = 365
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 159/305 (52%), Gaps = 20/305 (6%)
Query: 147 TVRKSTI---TVKILSLIHQLCLRNIHVTKRDLFYTDVKL----FQDQTQSDAVLDDVAC 199
TV ++ I T+K++ L N T R+ +Y F DQ S+ V++D+
Sbjct: 64 TVNQAKIFAQTIKMMEFSKGLLDTNDFSTLREAYYVSKNWGEARFDDQQPSNGVIEDIEA 123
Query: 200 ILGCTRSSLNVIAAEKGV-VVGRLIFSD---NGD--MIDCTKMGMGGKAIPPNIDRVGDM 253
R L I E G V+G L D GD IDCTK+G G +IP ++ ++ +
Sbjct: 124 ASEFLREDLGFIPEEDGAAVIGPLRIVDRTAEGDEIKIDCTKLGSGAYSIPNDVTKL-EF 182
Query: 254 QSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLA 313
++ A FIL +E + RL + F+ + CI+++ KG P ATR F++++ E KLP+L
Sbjct: 183 ETKADFILAIETAGMFARLNAEGFWKKHNCILISLKGVPARATRRFIKRLNEEYKLPILV 242
Query: 314 LVDSDPYG-LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTE 372
D DPYG L I GS + + L P+ + +G+ P D+ Y++P P+ +
Sbjct: 243 FTDGDPYGYLNIYRTLKVGSGKAVHLADKLAVPEARLIGVTPQDIVDYELPTH---PLKD 299
Query: 373 QDIKTGKDLLE-EDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
DIK KD L+ +DFVK P W L M +K +AE Q+L+ +G +Y+ E YLP K++
Sbjct: 300 HDIKRLKDGLKNDDFVKSFPQWQNALVQMADSKVRAEQQSLAKYGLKYVVEEYLPAKVED 359
Query: 432 KD-WL 435
WL
Sbjct: 360 SSTWL 364
>gi|84490128|ref|YP_448360.1| DNA topoisomerase VI subunit A [Methanosphaera stadtmanae DSM 3091]
gi|84373447|gb|ABC57717.1| type II DNA topoisomerase VI, subunit A [Methanosphaera stadtmanae
DSM 3091]
Length = 357
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 168/324 (51%), Gaps = 10/324 (3%)
Query: 111 SFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIH 170
S ++PSR + N +Y + L ++ R ++ ++K + + + +L
Sbjct: 30 SLKIPSRGTGNIIYNQDKRYFELGERKGTRSLGNVKQIKKMAQMMCVGNFCKELVNIQKT 89
Query: 171 VTKRDLFYT----DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFS 225
T R+++Y DV F +Q +S+ + +D+ LG +R +L ++ E G V G +
Sbjct: 90 ATMREMYYVSEGWDVG-FDNQQESNNITEDIEVTLGVSRENLGLLPEEDGASVYGDITLR 148
Query: 226 DNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCII 285
D+ + K+G G IPP ID V + S+ I+ VE Y R+ +++ Y+RF +I
Sbjct: 149 DDDVEFNAKKLGKSGYTIPPTIDDVEFVDSNVERIIAVETMGMYHRMVQEKAYDRFNTLI 208
Query: 286 VTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTP 345
V KGQ ATR F+R+ EL++PV D DP+G I V GS +++ + +L TP
Sbjct: 209 VGLKGQAARATRRFIRRASDELQVPVYICNDGDPWGFHIAMVIISGSAKLAHVNHDLATP 268
Query: 346 DIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQ 405
D K+LG+ SD++ Y +P + + D+ K+L + K + W E+ M+K +
Sbjct: 269 DAKFLGVTASDIENYDLPTD---KLKDIDVARLKELAADPRYKADF-WQTEIKKMIKLGR 324
Query: 406 KAEIQALSSFGFQYLSEVYLPLKL 429
KAE Q+ S +G +Y+ + Y P K+
Sbjct: 325 KAEQQSFSKYGLEYIVDNYFPNKI 348
>gi|354611442|ref|ZP_09029398.1| Type 2 DNA topoisomerase 6 subunit A [Halobacterium sp. DL1]
gi|353196262|gb|EHB61764.1| Type 2 DNA topoisomerase 6 subunit A [Halobacterium sp. DL1]
Length = 364
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 173/331 (52%), Gaps = 22/331 (6%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRK---STITVKILSLIHQLCLRNIH 170
+P+R+ SN Y + + V D+T+ R S+ RK S TV L+ HQL +
Sbjct: 35 LPTRSKSNIEYDEDANVWVYGDRTSTRSANSVRGARKLLKSVYTVDFLA--HQLD-DDRS 91
Query: 171 VTKRDLFYTDVKL------FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLI 223
T R+L+Y F DQ++SD +++D+ + G R ++ E G V+G L+
Sbjct: 92 STLRELYYLSESWDEKEAQFNDQSESDKLVEDLEIVSGVKREDFHMRPEESGAKVMGPLL 151
Query: 224 F---SDNGDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFY 278
++ GD I C +G GG IP N D + + SDA FIL VE RL E+ F
Sbjct: 152 LREQTNRGDREIHCQDDVGQGGYQIPNNPDTIEFLDSDADFILAVETGGMRDRLVENGFD 211
Query: 279 NRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYD 338
+ C++V GQP ATR +++ E+ LPV DSDP+ +I GS ++
Sbjct: 212 GEYNCLVVHLGGQPARATRRLTKRLHDEVGLPVTVFTDSDPWSYRIFGSVAYGSIKSAHL 271
Query: 339 SANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELN 398
S L TP+ +++GIRP D+ Y++P P+++ DI + LE+ + + W E++
Sbjct: 272 SEYLATPEAQFIGIRPEDIVDYELPTD---PLSDSDINALESELEDPRFQSD-FWTEQIE 327
Query: 399 LMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
L + +KAE QAL+S G ++++ YLP +L
Sbjct: 328 LQLDIDKKAEQQALASRGLDFVTDTYLPERL 358
>gi|407463038|ref|YP_006774355.1| DNA topoisomerase VI subunit A [Candidatus Nitrosopumilus koreensis
AR1]
gi|407046660|gb|AFS81413.1| DNA topoisomerase VI subunit A [Candidatus Nitrosopumilus koreensis
AR1]
Length = 370
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 185/363 (50%), Gaps = 15/363 (4%)
Query: 78 CREVTDLSLSAVQSTIETLI---LQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLK 134
+E++ + +S +E+L +I + G F +PSR+ N +Y +L + +L
Sbjct: 8 AKEISKKAKEKQKSVLESLKNHGAKIYEDLENGRFPKFSIPSRSVGNIVYDKKLRQYILG 67
Query: 135 DKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKL---FQDQTQSD 191
+ LR + + +R T + + ++L T RD++Y+ F+DQ++SD
Sbjct: 68 NSNALRSAKNSAQLRSFTQLMWLAFFANRLTQEKKSSTLRDVYYSSQAFAIEFEDQSESD 127
Query: 192 AVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMG----GKAIPPNI 247
++ D+ + R ++ E+ + G L + KM + G +I P++
Sbjct: 128 NIIVDLEAVTSRPREDFHIFPEERSSIFGDLNIEYTIPGYEGKKMNLSNHPDGYSIGPSL 187
Query: 248 DRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL 307
+ + A ++ +EK + R E++ +F II+ GQ +TR L+++ EL
Sbjct: 188 TTAELVDTSAEIVIAIEKGGLFTRFVEEQIDKKFKSIIINTGGQAPRSTRTLLKRLHDEL 247
Query: 308 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR 367
LPV+ L D D YG I V GS N ++ LT PD KW+G+ +D++KYK+P
Sbjct: 248 GLPVIILTDGDVYGEHIAMVIKSGSANAAH-LRELTVPDAKWVGVWATDIEKYKLP---T 303
Query: 368 LPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPL 427
+PMTE DIK D L++D ++ W +EL + ++ K+KAE++A + +G +++ YLP
Sbjct: 304 IPMTESDIKRCYD-LQKDPRYESGIWKKELEVFLRLKRKAELEAFAKYGLTNITDKYLPQ 362
Query: 428 KLQ 430
KL+
Sbjct: 363 KLE 365
>gi|307211946|gb|EFN87858.1| Meiotic recombination protein SPO11 [Harpegnathos saltator]
Length = 409
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 166/301 (55%), Gaps = 17/301 (5%)
Query: 142 FASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVK------LFQDQTQSDAVLD 195
FA+ + K + +++ +H+L L N T+R FY D+K L +Q D L+
Sbjct: 119 FAARRSRDKFVLMTMLMAEVHRLLLTNATRTRRS-FYYDLKSQMTESLAPNQRYVDRALN 177
Query: 196 DVACILGCTRSSLNVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQ 254
DVA +L C L ++A KG+ G + I +G +IDCT G G IP V ++
Sbjct: 178 DVANLLECAPWDLRLLATAKGLAAGNMSITLTDGHVIDCTIPG--GALIPQIASNVASIR 235
Query: 255 SDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLAL 314
+ A F+L+VEKDA + +L E+ CI++T KG PD ATR+ L+ + ++ LPV +
Sbjct: 236 AKAKFVLVVEKDATFQKLLEENCPRALNCILLTGKGYPDTATRMLLKLLSDKMDLPVYIV 295
Query: 315 VDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQD 374
D+DP+G+ I+ +Y GS + ++ NLT P+ +WLGI P++L +P++E D
Sbjct: 296 ADADPFGVDIVLIYRFGSMALCRENENLTCPNARWLGIFPTELIALGAKT---VPLSEAD 352
Query: 375 IKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDW 434
+ + + +V N ++L+++ K KAEI+A+S+ +L+ YLP K+ D+
Sbjct: 353 LAKLRSIEARAYV--NEAISKQLSVL--RKGKAEIEAVSTLSTNFLTATYLPYKIDGLDY 408
Query: 435 L 435
+
Sbjct: 409 I 409
>gi|45359000|ref|NP_988557.1| DNA topoisomerase VI subunit A [Methanococcus maripaludis S2]
gi|45047875|emb|CAF30993.1| DNA topoisomerase VI A [Methanococcus maripaludis S2]
Length = 419
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 159/305 (52%), Gaps = 20/305 (6%)
Query: 147 TVRKSTI---TVKILSLIHQLCLRNIHVTKRDLFYTDVKL----FQDQTQSDAVLDDVAC 199
TV ++ I T+K++ L N T R+ +Y F DQ S+ V++D+
Sbjct: 118 TVNQAKIFAQTIKMMEFSKGLLDTNDFSTLREAYYVSKNWGEARFDDQQPSNGVIEDIEA 177
Query: 200 ILGCTRSSLNVIAAEKGV-VVGRLIFSD---NGD--MIDCTKMGMGGKAIPPNIDRVGDM 253
R L I E G V+G L D GD IDCTK+G G +IP ++ ++ +
Sbjct: 178 ASEFLREDLGFIPEEDGAAVIGPLRIVDRTAEGDEIKIDCTKLGSGAYSIPNDVTKL-EF 236
Query: 254 QSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLA 313
++ A FIL +E + RL + F+ + CI+++ KG P ATR F++++ E KLP+L
Sbjct: 237 ETKADFILAIETAGMFARLNAEGFWKKHNCILISLKGVPARATRRFIKRLNEEYKLPILV 296
Query: 314 LVDSDPYG-LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTE 372
D DPYG L I GS + + L P+ + +G+ P D+ Y++P P+ +
Sbjct: 297 FTDGDPYGYLNIYRTLKVGSGKAVHLADKLAVPEARLIGVTPQDIVDYELPTH---PLKD 353
Query: 373 QDIKTGKDLLE-EDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
DIK KD L+ +DFVK P W L M +K +AE Q+L+ +G +Y+ E YLP K++
Sbjct: 354 HDIKRLKDGLKNDDFVKSFPQWQNALVQMADSKVRAEQQSLAKYGLKYVVEEYLPAKVED 413
Query: 432 KD-WL 435
WL
Sbjct: 414 SSTWL 418
>gi|147921703|ref|YP_684477.1| DNA topoisomerase VI subunit A [Methanocella arvoryzae MRE50]
gi|110619873|emb|CAJ35151.1| type II DNA topoisomerase VI, subunit A [Methanocella arvoryzae
MRE50]
Length = 366
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 179/350 (51%), Gaps = 17/350 (4%)
Query: 100 IARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILS 159
I I AG S + RA +N + + I L + R + +L +K T+ I
Sbjct: 19 IISDIDAGKNPSLDIRMRALNNVYFDEQSGIIKLGNDQQKRFYFNLGQAKKFLQTLLIAK 78
Query: 160 LIHQLCLRNI-HVTKRDLFYT---DV-----KLFQDQTQSDAVLDDVACILGCTRSSLNV 210
I L ++ ++ R LFYT D+ F Q +SD +++DV ++ R LN+
Sbjct: 79 QIKILLEQDKPALSIRQLFYTLKHDIPGAGENTFDVQDESDPLIEDVELMVDALREELNL 138
Query: 211 IAAEKGVVVGRLIFSDN-GDMIDCTKMGMGGKAIPPNID----RVGDMQSDAMFILLVEK 265
IA GV+ G +I D GD++D TKMG G A+PP ++ + +M +D +IL+VEK
Sbjct: 139 IATPNGVLAGPMIVEDKTGDVLDFTKMGSAGGAVPPIVEDDFFHIKEMNAD--YILVVEK 196
Query: 266 DAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKIL 325
A + L +++F+ + CI++T KGQP A R L + E +PV D DP+G I
Sbjct: 197 YAVWNLLNQEKFWKKNNCILLTGKGQPARAERRLLARFGEEYDIPVYVFTDMDPWGYYIY 256
Query: 326 SVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEED 385
SVY GS N+++ S P K+LG+ D+ + +P + + ++D K ++ E
Sbjct: 257 SVYKYGSINLAFFSEKAACPRAKYLGLSVKDVMNFDMPRSSWIKLNDEDHKRIAEISEYP 316
Query: 386 FVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+ KK+ W +EL + K K E AL S ++ + YLP K++ KD+
Sbjct: 317 WFKKDY-WQKELTDLKKFGYKIEQDALVSKSIEFTANNYLPTKIENKDFF 365
>gi|328860088|gb|EGG09195.1| hypothetical protein MELLADRAFT_104525 [Melampsora larici-populina
98AG31]
Length = 434
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 171/303 (56%), Gaps = 25/303 (8%)
Query: 129 DRIVLKDKTTLRP-----FASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKL 183
+ + LK++T P S S ++ + ++I+ + H RN+ VTKR+++Y DV L
Sbjct: 109 NHVALKNRTITFPKKVQNSKSGSGAKELAMLLRIVEITHDAISRNVTVTKREIYYRDVNL 168
Query: 184 FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGD-MIDCTKMGMGGKA 242
F+ QTQ D ++DD+A L +R+ L+ A+ KG++ G + D +I +K+ A
Sbjct: 169 FKTQTQVDRLVDDLAATLEISRAELHTFASSKGLLSGNIQLKTTDDQIISASKI----PA 224
Query: 243 IPPNIDRVGD--MQSDAMFILLVEKDAAYIRL-----AEDRFYNRFPCIIVTAKGQPDVA 295
+ P + + + ++ D F+L+VEK+A + L +DR + + ++T KG PD+A
Sbjct: 225 LIPAAEVISEIILEEDVRFVLVVEKEAVFTSLLSVGFPDDRRFGK--SALITGKGYPDLA 282
Query: 296 TRLFLRKMKMELK---LPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGI 352
TR L ++ E K +P+ LVD DP+G+ ILSVY GS MS+ + L+ I+W+G+
Sbjct: 283 TRQLLHRLSTEEKSNHIPIYILVDCDPHGIDILSVYKFGSHKMSFQTG-LSVEKIEWIGL 341
Query: 353 RPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQAL 412
+ S+ + + LP+T+ D+ + L+ + ++ W+ EL+ M++ KAEIQAL
Sbjct: 342 KCSEWKELDLDSHSLLPLTKSDLSKAEQLISRKGLPQS--WLNELSSMLEMGFKAEIQAL 399
Query: 413 SSF 415
SF
Sbjct: 400 LSF 402
>gi|315425013|dbj|BAJ46687.1| DNA topoisomerase VI subunit A [Candidatus Caldiarchaeum
subterraneum]
gi|315426694|dbj|BAJ48319.1| DNA topoisomerase VI subunit A [Candidatus Caldiarchaeum
subterraneum]
gi|343485466|dbj|BAJ51120.1| DNA topoisomerase VI subunit A [Candidatus Caldiarchaeum
subterraneum]
Length = 365
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 181/378 (47%), Gaps = 26/378 (6%)
Query: 62 SSSKPLTLSDLSLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSN 121
+ +KPL D + D L ++ ET+I I R G +P+R +SN
Sbjct: 2 TKAKPLQKKD--------DTRDKVLKSITKFAETIIKSIER----GEFPEVAIPARTTSN 49
Query: 122 QLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDV 181
Y P+L + VL ++ +R ++ +R + QL T RD FY +
Sbjct: 50 IEYNPQLRQYVLGERKIIRTARNIKHLRPLAQLSWMAMFASQLIRSRKTSTLRDAFYNAL 109
Query: 182 KL---FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDN-----GDMIDC 233
F+DQ +SD + ++ I+G R N+ E+ V G L + G +D
Sbjct: 110 GYDVDFEDQQESDEAVTELETIIGTVREDFNIYPEERSSVFGPLTIEYDVPGYEGRRLDL 169
Query: 234 TKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPD 293
T + G I P + ++S A + +VEK A Y R E+ +++ I+V GQ
Sbjct: 170 TTIP-DGAMIGPAMTTAKFVKSSAKQVFVVEKGAIYQRFLEENVPSKYKAIVVHTAGQAP 228
Query: 294 VATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIR 353
ATR F+R++ EL LPV D+DP+G+ I SV GS +S L PD W G+
Sbjct: 229 RATRKFIRRLNTELGLPVYIFTDADPWGMHIASVIVFGSA-LSAHVRELNVPDAVWAGLW 287
Query: 354 PSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALS 413
SD+ KYK+P + ++DI+ +L ++ +P W E++ K ++KAE++ALS
Sbjct: 288 ASDITKYKLPA---MKFNDEDIRRVAELEKDPRYVSDP-WKREISNFKKLQKKAELEALS 343
Query: 414 SFGFQYLSEVYLPLKLQQ 431
+G +Y+ YLP KL +
Sbjct: 344 RYGLEYIVSDYLPEKLAE 361
>gi|407465398|ref|YP_006776280.1| DNA topoisomerase VI subunit A [Candidatus Nitrosopumilus sp. AR2]
gi|407048586|gb|AFS83338.1| DNA topoisomerase VI subunit A [Candidatus Nitrosopumilus sp. AR2]
Length = 373
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 171/326 (52%), Gaps = 12/326 (3%)
Query: 112 FQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHV 171
F +PSR+ SN +Y +L + +L + +R + + +R T + + ++L
Sbjct: 48 FSIPSRSVSNIVYDKKLRQYILGNNAAVRSSRNSAQLRSFTQLMWLAFFANRLTHEKKSS 107
Query: 172 TKRDLFYTDVKL---FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNG 228
T RD++Y+ F+DQ++SD ++ D+ + R ++ E+ + G L
Sbjct: 108 TLRDVYYSSQAFAIEFEDQSESDNIIVDLEAVTSKPREDFHIFPEERSSIFGDLNIEYTI 167
Query: 229 DMIDCTKMGMG----GKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCI 284
+ M + G +I P++ + + A ++ +EK + R E++ +F I
Sbjct: 168 PGYEGKTMNLSNHPDGYSIGPSLTTAELVDTSAEIVIAIEKGGLFTRFVEEQIDKKFKSI 227
Query: 285 IVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTT 344
I+ GQ +TR L+++ E+ LPV+ L D D YG I V GS N ++ LT
Sbjct: 228 IINTGGQAPRSTRTLLKRLHDEMGLPVIVLTDGDVYGEHIAMVIKSGSANAAH-LRELTV 286
Query: 345 PDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTK 404
PD KW+G+ +D++KYK+P +PMTE DIK D L++D ++ W +EL++ ++ K
Sbjct: 287 PDAKWVGVWATDIEKYKLPT---IPMTESDIKRCYD-LQKDPRYQDGIWKKELDVFLRLK 342
Query: 405 QKAEIQALSSFGFQYLSEVYLPLKLQ 430
+KAE++A S +G +++ YLP KL+
Sbjct: 343 RKAELEAFSKYGLTNITDKYLPQKLE 368
>gi|448298523|ref|ZP_21488551.1| DNA topoisomerase VI subunit A [Natronorubrum tibetense GA33]
gi|445591193|gb|ELY45399.1| DNA topoisomerase VI subunit A [Natronorubrum tibetense GA33]
Length = 363
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 172/328 (52%), Gaps = 16/328 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
VP+R +N Y E+D V D+ + R S+ RK V + + + ++ T
Sbjct: 34 VPTRTKNNIEYSEEMDVWVYGDRESTRSANSVRGARKLLKAVYTIEFLAEQLEQDRSSTL 93
Query: 174 RDLFYTDVKL------FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y F DQ +S+ +++D+ + G TR ++ E G ++G L +
Sbjct: 94 RELYYLSESWDNKEAQFNDQDESNGLIEDLEIVSGVTREDFHMRPEESGATIMGPLHLRE 153
Query: 227 N---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
G+ I C K +G GG IP N D + + SDA FIL VE RL E+ F +
Sbjct: 154 QTRRGEREIHCQKDVGEGGYQIPNNPDTIEFLSSDADFILAVETGGMRDRLVENGFDEEY 213
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
+IV KGQP ATR ++++ EL+LPV D DP+ +I GS ++ S
Sbjct: 214 NALIVHLKGQPARATRRIIKRLHDELELPVTVFADGDPWSYRIYGSVAYGSIKSAHLSEY 273
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ +++GI+P+D+ +Y++P P+++ DI + LE+ + + W E++ L +
Sbjct: 274 LATPEAQYIGIQPADIVEYELPTD---PLSDSDINALESELEDPRFQTDY-WEEQIELQL 329
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKL 429
+ +K+E Q+L++ G ++++ YLP +L
Sbjct: 330 EIGKKSEQQSLAARGLDFVTDTYLPERL 357
>gi|189237865|ref|XP_001815524.1| PREDICTED: similar to meiotic recombination protein spo11
[Tribolium castaneum]
Length = 380
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 170/296 (57%), Gaps = 13/296 (4%)
Query: 143 ASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILG 202
+LSTV KS I + + + +N + +++Y L +Q Q + V+ D++ ++G
Sbjct: 95 TALSTVGKSVINKTWKNEVAIMEHQNGY--DLEIYYQIKHLVTNQEQVNRVVGDISQLVG 152
Query: 203 CTRSSLNVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFIL 261
LN+I+ G+V G L +F +G+M +C IP ++D + ++ S A FIL
Sbjct: 153 VGPWDLNIIS-HSGLVYGNLRLFWASGEMTNCNT---PATLIPYDLDEIIEIHSTANFIL 208
Query: 262 LVEKDAAYIRLAEDRFYNRF--PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDP 319
+VEK++ + +L E+ N+ P I++T KG PD+ TRLFL+K+ LKLPV LVD D
Sbjct: 209 VVEKESIFHKLLEEDLPNKLARPFIMITGKGVPDINTRLFLKKLSTMLKLPVFVLVDPDL 268
Query: 320 YGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGK 379
YG++I+ Y G+ + S L P+ +WLG+ PS++ K+ I Q +T++++K
Sbjct: 269 YGIRIMLNYRFGTITNCHLSEQLAVPNARWLGVFPSEIAKFGIQFQN---ITQREVKAIN 325
Query: 380 DLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+ L+ +++ +P +ELN ++ + +K I+ L +LSE YLP+KL +D++
Sbjct: 326 ETLKYPYMEAHPKIADELNYLLHSGKKGSIEGLVK-NNTFLSEAYLPVKLFNQDFI 380
>gi|430814299|emb|CCJ28443.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 367
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 167/296 (56%), Gaps = 23/296 (7%)
Query: 150 KSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLN 209
K + V++L LIH+ + N R++FY DV LF++Q D +++D+A RS+LN
Sbjct: 81 KFAVLVRVLDLIHEALVSN--TPSRNIFYRDVNLFKEQKIVDNIIEDIAFTFKIRRSALN 138
Query: 210 VIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAA 268
V+A +G+V G + I N D I+C + + + P+ + ++ +A +IL+VEK++
Sbjct: 139 VLATARGLVCGYIKIKRKNLDEINCLQ---DSEVLIPSETEIEGVEIEADWILVVEKEST 195
Query: 269 YIRLAEDRFYNRFPC----IIVTAKGQPDVATRLFLRKMKMELK---------LPVLALV 315
+ L + Y+ P +I+TAKG PD++TR FL + + P+L LV
Sbjct: 196 FKTLTICKLYDH-PVAGKGVIITAKGFPDISTREFLYMISKSISSSQNPYKRSTPILCLV 254
Query: 316 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 375
D DPYG+ IL+ Y GS +++S + P IKW+G+ +D DK + E +PM++ D+
Sbjct: 255 DHDPYGIGILATYKYGSYATAHNSHLMAIPSIKWVGVHSNDFDKTQ--ENGYIPMSKHDV 312
Query: 376 KTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
K +LL++++++ + W EL M+ T KAEIQ + + L+E YL K+ +
Sbjct: 313 KKAFELLQKEWIQDHISWRNELCRMLFTGMKAEIQLICENDGRCLTE-YLADKIAK 367
>gi|20093950|ref|NP_613797.1| DNA topoisomerase VI subunit A [Methanopyrus kandleri AV19]
gi|19886903|gb|AAM01727.1| DNA topoisomerase VI, subunit A [Methanopyrus kandleri AV19]
Length = 346
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/324 (32%), Positives = 167/324 (51%), Gaps = 10/324 (3%)
Query: 113 QVPSRASSNQLYVPELDRIVLK-DKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHV 171
++P R +SN Y PE + L DK RP +L +K + + + +L +
Sbjct: 26 RIPKRTTSNIRYDPEREIFTLGPDKLERRP-RTLKGSKKLAQMLSVAAFAKELVEKGRSA 84
Query: 172 TKRDLFYTDVKL---FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVV-GRLIFSDN 227
T R+++YT F+DQ +SDA+++D+ LG R V E G V G L+ ++
Sbjct: 85 TLREIYYTSEGWEVDFKDQRESDAIVEDLEATLGLKREEFGVWPEEDGAAVYGDLLVRED 144
Query: 228 GDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVT 287
G I + G+ G IPPN+D V + A ++ VE Y RL ++R + + +IV
Sbjct: 145 GVEIHAERAGISGYNIPPNVDAVEILDCGAERVIAVETMGMYRRLVQERAHEKLNALIVG 204
Query: 288 AKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDI 347
KGQ ATR LR++ EL LPV D DPYG I V GS ++ + L PD
Sbjct: 205 LKGQAARATRRLLRRLNEELGLPVYVFTDGDPYGWHIYMVIRSGSAKAAHLNEELACPDA 264
Query: 348 KWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKA 407
K++G+ +D+ +Y +P + P+ + D K ++ L D +P W +EL+L+ K +KA
Sbjct: 265 KFIGVTATDIVEYDLPTE---PLKKTDYKRIEE-LRRDPRYYDPFWKKELDLLEKLGKKA 320
Query: 408 EIQALSSFGFQYLSEVYLPLKLQQ 431
E QA + + Y+ + YLP KL +
Sbjct: 321 EQQAFAKYSLDYVVKEYLPAKLDE 344
>gi|340721663|ref|XP_003399236.1| PREDICTED: meiotic recombination protein SPO11-like [Bombus
terrestris]
Length = 398
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 169/310 (54%), Gaps = 27/310 (8%)
Query: 138 TLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVK------LFQDQTQSD 191
T+ FA+ K + + +++ H+L + N +T+R L+Y D+K L +Q D
Sbjct: 104 TVINFATKRGKDKFALMMTVMAAAHRLLIINSTITRRSLYY-DLKNDKTLNLVPEQWYLD 162
Query: 192 AVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFS-DNGDMIDCTKMGMGGKAIPPNIDRV 250
++ VA +L C+ LN++ KG+V G L F+ + +IDCT G G IP ++ V
Sbjct: 163 QAVNHVANLLNCSPWELNLLPTSKGLVAGELTFTLTDNRIIDCTVPG--GVLIPHSVSEV 220
Query: 251 GDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLP 310
+++ A +L+VEKDA + +L ED + CI+VT KG PDV TR+ ++ + +L+LP
Sbjct: 221 ISVRTRAKMVLIVEKDAVFQKLLEDDCISSLSCILVTGKGYPDVTTRMLVKLLSEKLELP 280
Query: 311 VLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPM 370
V +VD+DP+G+ I+ VY GS +S + L ++WLGI PS+L + +P+
Sbjct: 281 VYIIVDADPFGVDIMCVYRFGSAALSRERKCLACSKVRWLGIHPSELLALGVNT---VPL 337
Query: 371 TEQDIK-----TGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYL 425
TE D G+ + + F K EL +M KAEI+ + S ++L+ YL
Sbjct: 338 TEFDFSRLMALEGRPYMTDAFRK-------ELEIM--RTGKAEIENVYSSSGRFLAATYL 388
Query: 426 PLKLQQKDWL 435
P K++ D++
Sbjct: 389 PCKIKGNDYI 398
>gi|6692104|gb|AAF24569.1|AC007764_11 F22C12.24 [Arabidopsis thaliana]
Length = 299
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 146/254 (57%), Gaps = 29/254 (11%)
Query: 185 QDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNG-DMIDCTKMGMGGKAI 243
+ + + + DV +L C+R SL ++A+ +G+V GRL + G + +DC+ G G AI
Sbjct: 72 NESHKESSSITDVVALLRCSRYSLGIMASSRGLVAGRLFLQEPGKEAVDCSACGSSGFAI 131
Query: 244 PPNIDRVGD--MQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLR 301
+++ + + M++DA +I++VEK A + RL EDR +N PC+ +TAKG PD+ATR
Sbjct: 132 TGDLNLLDNTIMRTDARYIIIVEKHAIFHRLVEDRVFNHIPCVFITAKGYPDIATR---- 187
Query: 302 KMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYK 361
+P GL IL + GS M ++ ++KW+G+R DL+
Sbjct: 188 ----------------NPAGLAILCTFKFGSIGMGLEAYRYAC-NVKWIGLRGDDLN--L 228
Query: 362 IPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLS 421
IPE+ +P+ +D + K LL +++N ++EEL+LMV+T ++AEI+AL G+ YL
Sbjct: 229 IPEESLVPLKPKDSQIAKSLLSSKILQEN--YIEELSLMVQTGKRAEIEALYCHGYNYLG 286
Query: 422 EVYLPLKLQQKDWL 435
+ Y+ K+ Q ++
Sbjct: 287 K-YIATKIVQGKYI 299
>gi|315230262|ref|YP_004070698.1| DNA topoisomerase VI subunit A [Thermococcus barophilus MP]
gi|315183290|gb|ADT83475.1| DNA topoisomerase VI subunit A [Thermococcus barophilus MP]
Length = 381
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 188/366 (51%), Gaps = 22/366 (6%)
Query: 89 VQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIV-LKDKTTLRPFASLST 147
V +E L +I + G +P+R +N +Y E+ R++ + +K + R F +++
Sbjct: 18 VLRKLEELGKEILEEVKQGKNPYLDIPTRGLNN-VYFDEVKRVIRMGNKLSRRYFLNVAH 76
Query: 148 VRKSTITVKILSLIHQLCLRNIHVTKRDLFY--------TDVKLFQDQTQSDAVLDDVAC 199
RK T+ I + + +L H + R+ +Y T F+DQ++SD V++D+
Sbjct: 77 ARKFMQTLLIAAYVKRLVSEGKHASLREAYYANKHTIPGTKENTFEDQSESDPVIEDLER 136
Query: 200 ILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMF 259
+LG R +++ A +G V G + D D + +K+GMGG A+P ++ + + + +
Sbjct: 137 MLGVLREEMHLTADRRGYVYGDITIRDGEDEFNTSKLGMGGWAVPGTVEHIQFVDINVDY 196
Query: 260 ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDP 319
L+VE A RL E++F + +I+ +GQ R + ++ E LP++ D DP
Sbjct: 197 ALVVETAAMADRLIEEKFPKKERALIIATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDP 256
Query: 320 YGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY---KIPEQCR-LPMTEQDI 375
YG I S GS N++Y S L TP+ K++G+ D+ KY + E+ + +P ++
Sbjct: 257 YGWYIYSTIKQGSINLAYLSEKLATPEAKFVGMTMDDIKKYGLENVTEKLKGIPPNKKGG 316
Query: 376 KTG--KDLLEE----DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
TG K ++EE F K W +L L ++ + E QAL++ +++++ YLP K+
Sbjct: 317 PTGDYKRIIEEMNYPWFQTKE--WQRQLKLALQWGVRIEQQALANKSLEFVAKKYLPEKI 374
Query: 430 QQKDWL 435
++ L
Sbjct: 375 ANEELL 380
>gi|324518385|gb|ADY47088.1| Meiotic recombination protein spo-11, partial [Ascaris suum]
Length = 388
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 173/340 (50%), Gaps = 16/340 (4%)
Query: 93 IETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKST 152
IE L S+LA + V R +++ + + + I L + R FA
Sbjct: 26 IEACCLVFLHSLLAARSRTHHVVFRLPADECNLSDYE-IRLSRRHASR-FA--------- 74
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIA 212
+ L+ I+QL + TKRDLFY L+ Q D + V +L +RSS NV++
Sbjct: 75 FCARALAQIYQLRITTTFATKRDLFYEQKSLYGTQRNLDISITAVCRLLNASRSSQNVLS 134
Query: 213 AEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRL 272
+G+V+G LI +G +DC+ I ++ S A FIL+VEKDA + +L
Sbjct: 135 TGRGIVMGSLIVDVDGRRLDCS----SAPVIISDLMHHAHYVSWARFILVVEKDATFQKL 190
Query: 273 AEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCG 331
++ F +RF P I+VT KG PD++TR FL+ + ++P+ L+DSDP+G++I Y G
Sbjct: 191 IQEGFLSRFSPAILVTGKGYPDISTRKFLKHLTSTYQMPLFGLMDSDPHGIEIAMTYKYG 250
Query: 332 SKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNP 391
+ S + L+ P+ W+G+ S++ +Y +P + LP+ + + K L ++
Sbjct: 251 GRMKSAEVGELSLPNFIWIGLSRSEICRYPVPREQYLPLQKAEFKKTIKLCHRAAEMQDW 310
Query: 392 GWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+ ELN + ++ K E++A+SS ++ L KL +
Sbjct: 311 TLLNELNCLRESGTKLELEAVSSIAPGFMCNGMLAEKLAE 350
>gi|397583607|gb|EJK52708.1| hypothetical protein THAOC_27988 [Thalassiosira oceanica]
Length = 679
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 163/317 (51%), Gaps = 30/317 (9%)
Query: 140 RPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVAC 199
R F +++ R T ++S +HQL L N T R+++Y V F+ Q + D + DVA
Sbjct: 353 RSFGNIAQSRSFTSICLVMSFVHQLLLSNRTTTTREVYYVFVTHFRSQRECDGAILDVAK 412
Query: 200 ILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMG---GKAIPP----------- 245
+LG +R SL + A+ KG G L + G + C K G G A+P
Sbjct: 413 MLGVSRVSLGLSASPKGWFCGSLEITRRG-TLPCGKDVSGKIDGTALPSVQGLPITKEWT 471
Query: 246 NIDRVGDMQS---------DAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVAT 296
D G + DA I+++EK+ Y RL+E+R ++RFPCI+VT KG PD+AT
Sbjct: 472 ERDDEGRTEDGVEILLSSKDARLIVVIEKEGVYNRLSEERIFDRFPCILVTGKGFPDLAT 531
Query: 297 RLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSD 356
R + + EL+LPV+ + D +P+G+ +L++Y + M D + I+W+G+RPSD
Sbjct: 532 RALVHALHHELELPVVGICDCNPFGVSVLALYCYAGERMGIDGRMRYSVPIEWIGLRPSD 591
Query: 357 LD--KYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWV----EELNLMVKTKQKAEIQ 410
+D K ++P +T+ D K LL + NP EE+ LM + K E++
Sbjct: 592 VDGLKSELPGTVFQRLTDLDRKRITSLLGTENNSNNPFLTEEDGEEIQLMKERGYKLELE 651
Query: 411 ALSSFGFQYLSEVYLPL 427
AL G ++++ + L
Sbjct: 652 ALYWLGCDFMAKWAIAL 668
>gi|448373989|ref|ZP_21557874.1| DNA topoisomerase VI subunit A [Halovivax asiaticus JCM 14624]
gi|445660666|gb|ELZ13461.1| DNA topoisomerase VI subunit A [Halovivax asiaticus JCM 14624]
Length = 366
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 181/362 (50%), Gaps = 16/362 (4%)
Query: 82 TDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRP 141
T L+ + + L + G+ Q+P+R SN Y E D V D+++ R
Sbjct: 5 TSLNEQEAREQLLELAAEFYDQFAEGDVPRMQIPTRTKSNIEYDEEKDVWVYGDRSSTRS 64
Query: 142 FASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYT------DVKLFQDQTQSDAVLD 195
++S +K + + + T R+L+Y D F Q +S+ +++
Sbjct: 65 AKTVSGAQKLLKATYTIDFLANQLEEDRSSTLRELYYLSESWDLDEAQFNTQDESNNLIE 124
Query: 196 DVACILGCTRSSLNVIAAEKGV-VVGRLIFSDN---GDM-IDCTK-MGMGGKAIPPNIDR 249
D+ + R ++ E G V+G L+ + GD I C K +G GG IP N D
Sbjct: 125 DLEIVSEVKREDFHMRPEESGAKVMGPLLLREQTRRGDREIHCQKDVGQGGYQIPNNPDT 184
Query: 250 VGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKL 309
+ +++DA F+L VE RL E+ F + + I+V GQP ATR +++M+ EL L
Sbjct: 185 IEFLENDADFVLAVETGGMRDRLVENGFDDEYNSIVVHLGGQPARATRRLIKRMRNELDL 244
Query: 310 PVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLP 369
PV+ D DP+ +I GS ++ S L TPD +++GIRP D+ +Y +P P
Sbjct: 245 PVVVFADGDPWSYRIYGSVAYGSIKSAHLSEYLATPDAQYIGIRPEDIVEYDLPTD---P 301
Query: 370 MTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
+++ D+ + L ED + W E++ L ++ ++K+E Q+L++ G ++++ YLP +L
Sbjct: 302 LSDSDVNALESEL-EDPRFQTEFWEEQIELQLEIEKKSEQQSLAARGLDFVTDTYLPTRL 360
Query: 430 QQ 431
++
Sbjct: 361 EE 362
>gi|395332754|gb|EJF65132.1| topoisomerase acting in meiosis [Dichomitus squalens LYAD-421 SS1]
Length = 342
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 164/287 (57%), Gaps = 28/287 (9%)
Query: 140 RPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVAC 199
RPFA L +++ LIH+ + + VTKRD++Y DV+LF+ Q D ++DD+A
Sbjct: 16 RPFAQL---------FRVIDLIHEALVDGVPVTKRDIYYKDVQLFRSQATVDRLVDDLAA 66
Query: 200 ILGCTRSSLNVIAAEKGVVVGRLI--FSDNGDMIDCTKMGMGGKA--IPP--NIDRVGDM 253
L TR+ L+V A+ KG++ G + +G+ ++ G A IPP +I R
Sbjct: 67 TLQLTRADLDVRASSKGLMCGSGVTMHMQSGETLELCD----GDASLIPPSEDIKRFAVA 122
Query: 254 QSDAMFILLVEKDAAYIRLAEDRF--YNRFPC--IIVTAKGQPDVATRLFLRKMKMEL-- 307
Q+ A ++L+VEK+A + L R + P +IVT KG PDVATR ++ + L
Sbjct: 123 QTLA-WVLVVEKEAVFQTLCRLRLATHETLPGSGLIVTGKGYPDVATRQLVKTLADNLPA 181
Query: 308 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR 367
++P+LALVD D YG+ ILSVY GS M +++++L ++WLG+ S+L I +
Sbjct: 182 RVPILALVDGDAYGIDILSVYKHGSTRMRHENSHLAADRVQWLGLWASELASLGIDKDAL 241
Query: 368 LPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSS 414
LP+T+ D K + LL+ + + W +EL M+ +++KAEI+ L +
Sbjct: 242 LPITKHDEKKARSLLKRENLPAR--WRKELQYMLFSRRKAEIEVLGA 286
>gi|255514007|gb|EET90271.1| DNA topoisomerase (ATP-hydrolyzing) [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 370
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 175/338 (51%), Gaps = 16/338 (4%)
Query: 112 FQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHV 171
F V +R SN Y + + L + F +++ ++ TV I + H +N+H
Sbjct: 34 FTVTTRTRSNIKYDDKDGFLRLGNSKEEHSFINVAQAKRFMQTVAIAAKCHDFVKQNLHT 93
Query: 172 TKRDLFYT---------DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRL 222
T R LFY D +F +Q++S+ +++D+ LG R +++ A KGV+ G +
Sbjct: 94 TIRGLFYQLKYSLGEDIDENIFNEQSESNPLIEDLEVALGIKREYMHLNANRKGVLAGNM 153
Query: 223 I----FSDNGDMIDCTKMGMGGKAIPPNIDR-VGDMQSDAMFILLVEKDAAYIRLAEDRF 277
F D+ ID K G G AIP ++D + + A ++++VEKDA + RL ED F
Sbjct: 154 KVIDRFGDDRIEIDTGKTGRSGWAIPSDVDNDIEFVDVKAKYVIVVEKDALWQRLNEDGF 213
Query: 278 YNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSY 337
+ + I+++ +GQ TR +RK+ + LPV D D +G I GS N++Y
Sbjct: 214 WKKENAILISPQGQAARGTRRLIRKL-ADQGLPVYVFNDGDAWGWYIYWTIKTGSMNLAY 272
Query: 338 DSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEEL 397
++ TP+ +++G+ +D++ Y + + TE DIK +++L ++ ++ WV EL
Sbjct: 273 IGRDIATPEARFIGVTMADIEHYDFLKNLTMRATEVDIKRAQEMLNYPWINRHKEWVAEL 332
Query: 398 NLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+++TK+K E L ++ + Y+ K++ +D+L
Sbjct: 333 KKVLETKKKLEQDTLQGPRLTFVDD-YIREKIKNRDFL 369
>gi|197210319|gb|ACH48180.1| Spo11 [Acyrthosiphon pisum]
Length = 317
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 168/310 (54%), Gaps = 11/310 (3%)
Query: 93 IETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKST 152
IE +IL + SI N + ++ + + + + K TL+ F + + T
Sbjct: 15 IENIILNVVNSICNNNKLVINLTKLSNWSGCIYNDKNHMTTK---TLQ-FQTKRSRINFT 70
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIA 212
I + +LS I++ + T R+L+Y D LF+ L D+ C+LG L +
Sbjct: 71 IIIYLLSKIYKNLMTKKSCTTRELYYGDTILFKHSNIVRKALIDICCLLGAKSWELGITL 130
Query: 213 AEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIR 271
G+V G L I+ NG ++DC+ G + IP +I + + +S A +IL+VEK+A++ +
Sbjct: 131 TSSGLVAGNLKIYMSNGKILDCSDTNEGIQ-IPQDILEIDNFESKAKYILIVEKNASFQK 189
Query: 272 LAEDRFYNRFPC--IIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYG 329
+ + + C +++T KG PD+ TRLF++++ +L +P+L LVD++P+G++I+ VY
Sbjct: 190 IINEGLLKKNKCTFVMITGKGFPDINTRLFVKQLSCKLNIPILVLVDANPFGIEIMCVYR 249
Query: 330 CGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKK 389
GS +M + + L P IKWLG+ P+D++ +P + +T D K LL+ ++
Sbjct: 250 FGSNSMVHQNEMLCVPSIKWLGVYPTDIESLNLPS---IALTNLDQDRLKSLLKRSYINS 306
Query: 390 NPGWVEELNL 399
N +++++L
Sbjct: 307 NHKLLQQVSL 316
>gi|328719464|ref|XP_003246771.1| PREDICTED: meiotic recombination protein SPO11 [Acyrthosiphon
pisum]
Length = 325
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 168/310 (54%), Gaps = 11/310 (3%)
Query: 93 IETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKST 152
IE +IL + SI N + ++ + + + + K TL+ F + + T
Sbjct: 23 IENIILNVVNSICNNNKLVINLTKLSNWSGCIYNDKNHMTTK---TLQ-FQTKRSRINFT 78
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIA 212
I + +LS I++ + T R+L+Y D LF+ L D+ C+LG L +
Sbjct: 79 IIIYLLSKIYKNLMTKKSCTTRELYYGDTILFKHSNIVRKALIDICCLLGAKSWELGITL 138
Query: 213 AEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIR 271
G+V G L I+ NG ++DC+ G + IP +I + + +S A +IL+VEK+A++ +
Sbjct: 139 TSSGLVAGNLKIYMSNGKILDCSDTNEGIQ-IPQDILEIDNFESKAKYILIVEKNASFQK 197
Query: 272 LAEDRFYNRFPC--IIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYG 329
+ + + C +++T KG PD+ TRLF++++ +L +P+L LVD++P+G++I+ VY
Sbjct: 198 IINEGLLKKNKCTFVMITGKGFPDINTRLFVKQLSCKLNIPILVLVDANPFGIEIMCVYR 257
Query: 330 CGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKK 389
GS +M + + L P IKWLG+ P+D++ +P + +T D K LL+ ++
Sbjct: 258 FGSNSMVHQNEMLCVPSIKWLGVYPTDIESLNLPS---IALTNLDQDRLKSLLKRSYINS 314
Query: 390 NPGWVEELNL 399
N +++++L
Sbjct: 315 NHKLLQQVSL 324
>gi|433638425|ref|YP_007284185.1| DNA topoisomerase VI, subunit A [Halovivax ruber XH-70]
gi|433290229|gb|AGB16052.1| DNA topoisomerase VI, subunit A [Halovivax ruber XH-70]
Length = 366
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 180/362 (49%), Gaps = 16/362 (4%)
Query: 82 TDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRP 141
T L+ + + L + G+ Q+P+R SN Y E D V D+++ R
Sbjct: 5 TSLNEQEAREQLLELAAEFYDQFAEGDVPRMQIPTRTKSNIEYDEEKDVWVYGDRSSTRS 64
Query: 142 FASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYT------DVKLFQDQTQSDAVLD 195
++S +K + + + T R+L+Y D F Q +S+ +++
Sbjct: 65 AKTVSGAQKLLKATYTIDFLANQLEEDRSSTLRELYYLSESWDLDEAQFNTQDESNNLIE 124
Query: 196 DVACILGCTRSSLNVIAAEKGV-VVGRLIFSDN---GDM-IDCTK-MGMGGKAIPPNIDR 249
D+ + R ++ E G V+G L+ + GD I C K +G GG IP N D
Sbjct: 125 DLEIVSEVKREDFHMRPEESGAKVMGPLLLREQTRRGDREIHCQKDVGQGGYQIPNNPDT 184
Query: 250 VGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKL 309
+ + +DA F+L VE RL E+ F + + I+V GQP ATR +++M+ EL L
Sbjct: 185 IEFLDNDADFVLAVETGGMRDRLVENGFDDEYNSIVVHLGGQPARATRRLIKRMRNELDL 244
Query: 310 PVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLP 369
PV+ D DP+ +I GS ++ S L TPD +++GIRP D+ +Y +P P
Sbjct: 245 PVVVFADGDPWSYRIYGSVAYGSIKSAHLSEYLATPDAQYIGIRPEDIVEYDLPTD---P 301
Query: 370 MTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
+++ D+ + L ED + W E++ L ++ ++K+E Q+L++ G ++++ YLP +L
Sbjct: 302 LSDSDVNALESEL-EDPRFQTEFWEEQIELQLEIEKKSEQQSLAARGLDFVTDTYLPTRL 360
Query: 430 QQ 431
++
Sbjct: 361 EE 362
>gi|194755593|ref|XP_001960068.1| GF11715 [Drosophila ananassae]
gi|190621366|gb|EDV36890.1| GF11715 [Drosophila ananassae]
Length = 330
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 183/353 (51%), Gaps = 26/353 (7%)
Query: 86 LSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASL 145
+S + IE L++++ RS+L G+ S ++P + + R+ +++ F L
Sbjct: 1 MSECANRIELLVVELLRSLLNGDA-SLRIPRNTTPT---TRDHRRVSYNHRSSRHSFCLL 56
Query: 146 STVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTR 205
V +L+ H L + T R L+Y D +LF Q + DV +L +
Sbjct: 57 ---------VYLLARTHSLQVHGGSYTVRGLYYGDPELFLSQNRMARARLDVCRMLSTSP 107
Query: 206 SSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVE 264
L V+AA KG+V G + F NGD++DC+ G G +P N + V M++ A +L+VE
Sbjct: 108 MHLGVLAASKGLVAGDVQFLMTNGDVLDCSVYG-GAVTLPWNPENVERMETQAELVLVVE 166
Query: 265 KDAAYIRLAEDRFYNRFP--CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGL 322
K++ + L + F I++T KG PD TR L ++ E LP LVD+DP+G+
Sbjct: 167 KESVFESLLSRNIFATFGRRFILITGKGYPDCCTRRILHRLTEENHLPAYILVDADPFGI 226
Query: 323 KILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLL 382
+I+ VY GS+ MS+ S TTP ++W+G+ PS++ + + D K DLL
Sbjct: 227 EIMLVYRHGSQAMSFSSRGYTTPSLRWIGLHPSEIAALG---GGAVALGTGDNKKINDLL 283
Query: 383 EEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
++ G +EL ++ + + KAEI+++ F LSE Y+P K+++K +L
Sbjct: 284 ARSGLEA--GVRQELRMLREVQLKAEIESVICF----LSEDYIPNKIKRKLFL 330
>gi|333986519|ref|YP_004519126.1| Type 2 DNA topoisomerase 6 subunit A [Methanobacterium sp. SWAN-1]
gi|333824663|gb|AEG17325.1| Type 2 DNA topoisomerase 6 subunit A [Methanobacterium sp. SWAN-1]
Length = 352
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 171/357 (47%), Gaps = 24/357 (6%)
Query: 83 DLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPF 142
DL L ++ +I + R + + +VPSR +SN +Y VL D+ R
Sbjct: 5 DLILGRLRGLGNGIIDDVERHTVP----AIKVPSRGTSNIVYDDAKRYYVLGDRYGKRSL 60
Query: 143 ASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYT----DVKLFQDQTQSDAVLDDVA 198
++ ++K V + L T R+++Y DV F DQ +S+ + +D+
Sbjct: 61 GNVKQIKKVAQMVSTANFCKGLVETQKTATIREMYYVSEGWDVD-FGDQQESNLIGEDLE 119
Query: 199 CILGCTRSSLNVIAAEKGVVV-GRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDA 257
LG TR L ++ E G V G L D+ ++ K G G +I P ID V +
Sbjct: 120 VTLGVTREDLGLMPEEDGAAVYGDLTVKDDDVEVNALKSGKSGYSISPTIDDVEFLDHGV 179
Query: 258 MFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDS 317
++ VE + R+ ++ Y +F C+IV KGQ ATR FL++ EL LPV D
Sbjct: 180 ERVIAVETMGMFHRMVQEEAYKKFNCLIVGLKGQAARATRRFLKRTNEELGLPVYICNDG 239
Query: 318 DPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKT 377
DP+G I V GS +++ + L TP+ K+LG+ SD+ Y +P + + D+
Sbjct: 240 DPWGFHIAMVIISGSAKLAHVNHELATPNAKFLGVTASDIVNYDLPTD---KLKDIDVLR 296
Query: 378 GKDL-----LEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
K+L EDF W E+ M+K +KAE Q+ S +G +Y+ E YLP KL
Sbjct: 297 LKELYKDPRYHEDF------WKLEIKKMLKIGKKAEQQSFSKYGLEYVVEKYLPEKL 347
>gi|336371828|gb|EGO00168.1| hypothetical protein SERLA73DRAFT_107163 [Serpula lacrymans var.
lacrymans S7.3]
Length = 296
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 146/263 (55%), Gaps = 9/263 (3%)
Query: 161 IHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVG 220
+H+ L +I VTKRD++Y DV LF+ Q D ++DDVA RS L+V A+ KG++ G
Sbjct: 1 MHEALLYDIPVTKRDMYYKDVSLFKSQATVDRLVDDVAATFELNRSDLHVRASTKGLICG 60
Query: 221 R--LIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFY 278
LI G+ I + + +IDR +++ D ++L+VEKDA + L +F
Sbjct: 61 SGLLIHLTGGETIHINESEGALIPVGEDIDRF-EIEGDMAWVLIVEKDAVFQTLCRLQFA 119
Query: 279 NR----FPCIIVTAKGQPDVATRLFLRKMKMEL--KLPVLALVDSDPYGLKILSVYGCGS 332
+ P II+T KG PDVATR ++ L +P+LALVD D YG+ ILSVY GS
Sbjct: 120 SHPSLPGPGIIITGKGYPDVATRQLVKTFSDNLPSHIPILALVDGDAYGIDILSVYKYGS 179
Query: 333 KNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPG 392
++ +++ L ++WLGI S+L I +P+T+ D K +L+
Sbjct: 180 WSLRHENGKLAAERVEWLGIWTSELADLGIDIDSMIPITKHDEKKAILMLQRPPETMPAP 239
Query: 393 WVEELNLMVKTKQKAEIQALSSF 415
W +EL M+ T++KAEI+ LS+
Sbjct: 240 WRKELMRMLHTRRKAEIEILSAH 262
>gi|336384581|gb|EGO25729.1| hypothetical protein SERLADRAFT_437454 [Serpula lacrymans var.
lacrymans S7.9]
Length = 498
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 151/275 (54%), Gaps = 16/275 (5%)
Query: 156 KILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEK 215
++L +H+ L +I VTKRD++Y DV LF+ Q D ++DDVA RS L+V A+ K
Sbjct: 191 RVLDFMHEALLYDIPVTKRDMYYKDVSLFKSQATVDRLVDDVAATFELNRSDLHVRASTK 250
Query: 216 GVVVGR--LIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
G++ G LI G+ I + + +IDR +++ D ++L+VEKDA + L
Sbjct: 251 GLICGSGLLIHLTGGETIHINESEGALIPVGEDIDRF-EIEGDMAWVLIVEKDAVFQTLC 309
Query: 274 EDRFYNR----FPCIIVTAKGQPDVATRLFLRKMKMEL--KLPVLALVDSDPYGLKILSV 327
+F + P II+T KG PDVATR ++ L +P+LALVD D YG+ ILSV
Sbjct: 310 RLQFASHPSLPGPGIIITGKGYPDVATRQLVKTFSDNLPSHIPILALVDGDAYGIDILSV 369
Query: 328 YGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYK-------IPEQCRLPMTEQDIKTGKD 380
Y GS ++ +++ L ++WLGI S+L +Y I +P+T+ D K
Sbjct: 370 YKYGSWSLRHENGKLAAERVEWLGIWTSELAEYDHTNLLLGIDIDSMIPITKHDEKKAIL 429
Query: 381 LLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSF 415
+L+ W +EL M+ T++KAEI+ LS+
Sbjct: 430 MLQRPPETMPAPWRKELMRMLHTRRKAEIEILSAH 464
>gi|392569898|gb|EIW63071.1| DNA topoisomerase IV alpha subunit [Trametes versicolor FP-101664
SS1]
Length = 389
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 165/305 (54%), Gaps = 25/305 (8%)
Query: 118 ASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLF 177
A L +P+ R V + RPFA L K + L+H+ L + TKRD++
Sbjct: 53 APMRTLAMPQRSRGV-----SARPFAQL---------FKTVDLMHEALLDQVPTTKRDMY 98
Query: 178 YTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGR--LIFSDNGDMIDCTK 235
Y DV+LF Q+ D ++DD+A L +RS L+V A+ KG+V G I +G+ ++ +
Sbjct: 99 YKDVELFGSQSTVDRLVDDLAATLQLSRSDLSVRASAKGLVCGSGLRIHLHSGETVELSD 158
Query: 236 MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRF--YNRFPC--IIVTAKGQ 291
+ +I++ D+ ++L+VEK+A + L R + P +++T KG
Sbjct: 159 SEPVLIPLSEDIEQF-DVDEGLAWVLVVEKEAVFQTLCRLRLGTHPLLPGKGLVITGKGY 217
Query: 292 PDVATRLFLRKMKMEL--KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKW 349
PDVATR L + L +P+L LVD D YG+ ILSVY GS +M ++ L I+W
Sbjct: 218 PDVATRQLLNALSANLPPHIPILCLVDGDAYGIDILSVYKFGSTSMQHEKDQLAAARIQW 277
Query: 350 LGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEI 409
LG+ S+L IP+ +P+T+ D K + LL+ + + + W +EL M+ T++KAEI
Sbjct: 278 LGLWSSELAALGIPKDALIPITKHDEKKARSLLKREGIPSD--WRKELQRMLFTRRKAEI 335
Query: 410 QALSS 414
+ LSS
Sbjct: 336 EVLSS 340
>gi|157137100|ref|XP_001663887.1| meiotic recombination protein spo11 [Aedes aegypti]
gi|108869811|gb|EAT34036.1| AAEL013701-PA [Aedes aegypti]
Length = 707
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 184/351 (52%), Gaps = 18/351 (5%)
Query: 89 VQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTV 148
+ STI + +++S L G+ V +RA+ + + + I+ + T +++
Sbjct: 364 IMSTIGAIFQHLSQSELEGSKLVLLVKTRATWDMCAME--NDILTRQSTPEECLKTINYH 421
Query: 149 RKST-----ITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGC 203
K + + V +LS I ++ TKR+L+Y + ++ +Q D L DV +L
Sbjct: 422 HKHSKPRFVLIVFLLSEIFRMLASGSSCTKRELYYRNPQITINQRCVDECLRDVCFLLKA 481
Query: 204 TRSSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILL 262
LNV + KG++ G + F S + IDC G IP +++ + ++ DA +L+
Sbjct: 482 DLWELNVFCSSKGLIAGPVKFQSKLEETIDC--FNSFGTQIPTDVNGLLSIELDADLVLI 539
Query: 263 VEKDAAYIRLAEDRFYNRFP--CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
VEKD + RL +D R I+VT+KG PDVATRL L+K+ + ++P+ ALVD+DP+
Sbjct: 540 VEKDTVFRRLLDDGILTRLSKKIIVVTSKGYPDVATRLLLKKIWDKHRIPMYALVDADPF 599
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 380
G++I VY GS +S+ S++L P I+WLG+RPS + P E I ++
Sbjct: 600 GIEIYCVYKFGSLALSHQSSHLAVPSIQWLGLRPSHTVLLDLKLLPLTPRDESRI---RE 656
Query: 381 LLEEDFVKKNPGW--VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
LL ++ + PG EL ++ + KAEI++L+ YL YLP +L
Sbjct: 657 LLRRPYIGQ-PGCELERELKMLRENNGKAEIESLADISVDYLISEYLPNQL 706
>gi|288930742|ref|YP_003434802.1| DNA topoisomerase (ATP-hydrolyzing) [Ferroglobus placidus DSM
10642]
gi|288892990|gb|ADC64527.1| DNA topoisomerase (ATP-hydrolyzing) [Ferroglobus placidus DSM
10642]
Length = 360
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 183/360 (50%), Gaps = 24/360 (6%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
+L+++ +E + Q++R G + +R N + + V D+T+ R S
Sbjct: 7 ALASLLKILERIYDQMSR----GEVPEIDIATRTKYNIEFDENSEVWVYGDRTSTR---S 59
Query: 145 LSTVRKSTITVK---ILSLIHQLCLRNIHVTKRDLFYTD----VKLFQDQTQSDAVLDDV 197
TVR + + ++ ++ + + N T R+L+Y + F +Q +SD +++D+
Sbjct: 60 AKTVRGAYMLLRMAYVIGFLKEQLKANKSSTLRELYYISENWGLAKFDEQAESDRLIEDL 119
Query: 198 ACILGCTRSSLNVIAAEKGV-VVGRLIFSDNGDM----IDCTK-MGMGGKAIPPNIDRVG 251
+ R + E G V+G L +N I C + +G GG IP N+D +
Sbjct: 120 EILTSFQREHFRIRPEEDGATVIGPLRIRENTRRGVREIHCQEDVGEGGYQIPVNVDNIE 179
Query: 252 DMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPV 311
+ DA F++ VE RL E+ F +F IIV KGQP +TR L+++ EL LPV
Sbjct: 180 FVDHDADFVIAVETGGMRDRLVENGFDEKFRAIIVHLKGQPARSTRRLLKRLNAELNLPV 239
Query: 312 LALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMT 371
+ D DP+ +I + GS ++ S L TP K++GIRPSD+ KY +P +T
Sbjct: 240 VVFTDGDPWSYRIYASVAYGSIKAAHLSEYLATPSAKFVGIRPSDIVKYDLPSD---KLT 296
Query: 372 EQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
++DI+ K +L D W E+NL ++ +K+E QAL+ +G Y+++VYLP +L +
Sbjct: 297 DKDIQALKAIL-TDPRFDTEFWKNEINLQLELGKKSEQQALAKYGLDYVTDVYLPERLTE 355
>gi|448357876|ref|ZP_21546571.1| DNA topoisomerase VI subunit A [Natrialba chahannaoensis JCM 10990]
gi|445648184|gb|ELZ01146.1| DNA topoisomerase VI subunit A [Natrialba chahannaoensis JCM 10990]
Length = 362
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 167/328 (50%), Gaps = 16/328 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
VP+R +N Y E+D V D+ + R S+ RK V + + + T
Sbjct: 33 VPTRTKNNIEYDEEMDVWVYGDRESTRSANSVRGARKLLKAVYTIEFLADQLEEDRSSTL 92
Query: 174 RDLFYTDVKL------FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y F DQ +S+ +++D+ + G TR ++ E G ++G L +
Sbjct: 93 RELYYLSESWDNKEAQFNDQDESNGLIEDLEIVSGVTREDFHMRPEESGATLMGPLHLRE 152
Query: 227 N---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
G+ I C + +G GG IP N D + + +DA FIL VE RL E+ F +
Sbjct: 153 QTRRGEREIHCQEDVGEGGYQIPNNPDTIEFLGTDADFILAVETGGMRDRLVENGFDEEY 212
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
+IV KGQP ATR +++ EL LPV D DP+ +I GS ++ S
Sbjct: 213 NALIVHLKGQPARATRRITKRLHNELDLPVTVFADGDPWSYRIYGSVAYGSIKSAHLSEY 272
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ K++GI+P+D+ +Y +P P+++ DI + L ED + W E++ L +
Sbjct: 273 LATPEAKYIGIQPADIVEYDLPTD---PLSDSDINALESEL-EDPRFQTEYWEEQIELQL 328
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKL 429
+ ++K+E Q+L+S G ++++ YLP +L
Sbjct: 329 EIEKKSEQQSLASHGLDFVTDTYLPERL 356
>gi|148508003|gb|ABQ75802.1| DNA topoisomerase VI subunit A [uncultured haloarchaeon]
Length = 366
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 167/333 (50%), Gaps = 16/333 (4%)
Query: 115 PSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKR 174
P+R SN Y + + V D+T+ S+ +K ++ + ++ T R
Sbjct: 38 PTRTKSNIEYDEDTEVWVYGDRTSTTSGKSVDGAKKLFKLAYVVEFLTDQLEQDKSSTLR 97
Query: 175 DLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSDN 227
+L+Y D F DQ++S+++++++ + R ++ E G ++G L +
Sbjct: 98 ELYYLSESWNEDHAQFADQSESNSLIEELEIVSDARREEFHMRPEESGATLIGPLKIKEQ 157
Query: 228 ---GD-MIDC-TKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFP 282
GD +I C +G GG IP N D + +++DA F+L VE RL E+ F +
Sbjct: 158 TRRGDRLIHCQADVGEGGYQIPNNPDTIEFLETDAQFVLAVETGGMRDRLVENGFDEEYN 217
Query: 283 CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANL 342
IIV KGQP ATR +++ EL LPV D DP+ +I + GS ++ S L
Sbjct: 218 AIIVHLKGQPARATRRIIKRFNTELDLPVAVFTDGDPWSYRIYASVSYGSIKSAHLSEYL 277
Query: 343 TTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVK 402
TPD +++GI P D+ KY +P +++ DI + L ED W +++ L +K
Sbjct: 278 ATPDAQYVGITPEDITKYNLPSDI---LSDSDINALESEL-EDPRFSTEYWEKQIKLQLK 333
Query: 403 TKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
QKAE QAL+S G Y+++ YLP KL Q +L
Sbjct: 334 IGQKAEQQALASRGLDYVTDSYLPEKLAQHGFL 366
>gi|448330003|ref|ZP_21519296.1| DNA topoisomerase VI subunit A [Natrinema versiforme JCM 10478]
gi|445612991|gb|ELY66706.1| DNA topoisomerase VI subunit A [Natrinema versiforme JCM 10478]
Length = 363
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 168/330 (50%), Gaps = 16/330 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
VP+R +N Y E+D V D+ + R S+ RK + + + + + T
Sbjct: 34 VPTRTKNNIEYDEEMDVWVYGDRESTRSANSVRGARKLLKAIYTIEFLSEQLEEDRSSTL 93
Query: 174 RDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y D F DQ +S+++++D+ + G TR ++ E G ++G L +
Sbjct: 94 RELYYLSESWDNDEAQFNDQDESNSMVEDLEIVSGVTREDFHMRPEESGATIMGPLYLRE 153
Query: 227 N---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
G+ I C + +G GG IP N D + + DA FIL VE RL E+ F +
Sbjct: 154 QTRRGERKIHCQEDVGEGGYQIPNNPDTIDFLDCDADFILAVETGGMRDRLVENGFDEEY 213
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
+IV KGQP ATR +++ EL LPV D DP+ +I GS ++ S
Sbjct: 214 NALIVHLKGQPARATRRITKRLHDELDLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEY 273
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ ++GI+P+D+ +Y++P P+ + DI + LE+ + + W E++ L +
Sbjct: 274 LATPEADFIGIQPADIVEYELPTD---PLADSDINALESELEDPRFQTDY-WEEQIELQL 329
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+K+E Q+L+S G ++++ YLP +L +
Sbjct: 330 DLGKKSEQQSLASHGLDFVTDTYLPERLSE 359
>gi|448311914|ref|ZP_21501667.1| DNA topoisomerase VI subunit A [Natronolimnobius innermongolicus
JCM 12255]
gi|445603535|gb|ELY57497.1| DNA topoisomerase VI subunit A [Natronolimnobius innermongolicus
JCM 12255]
Length = 362
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 173/332 (52%), Gaps = 16/332 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
VP+R +N Y + V D+ + R S+ RK V + + + + T
Sbjct: 33 VPTRTKNNIEYDEDEKVWVYGDRESTRSANSVRGARKLLKAVYTIDFLAEQLEEDRSSTL 92
Query: 174 RDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y D F DQ +S+++++D+ + G TR ++ E G ++G L +
Sbjct: 93 RELYYLSESWDNDEAQFNDQDESNSMVEDLEIVSGVTREDFHMRPEESGATIMGPLHLRE 152
Query: 227 N---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
G+ I C + +G GG IP N D + + +DA FIL VE RL E+ F + +
Sbjct: 153 QTRRGEREIHCQEDVGEGGYQIPNNPDTIEFLDTDADFILAVETGGMRDRLVENGFDDEY 212
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
+IV KGQP ATR +++ EL LPV D DP+ +I GS ++ S
Sbjct: 213 NALIVHLKGQPARATRRITKRLHDELGLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEY 272
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ K++GI+P+D+ +Y++P P+++ D+ + LE+ + + W E++ L +
Sbjct: 273 LATPEAKFIGIQPADIVEYELPTD---PLSDSDVNALESELEDPRFQTD-YWEEQIELQL 328
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQKD 433
+ ++K+E Q+L+S G ++++ YLP +L + D
Sbjct: 329 EIEKKSEQQSLASHGLDFVTDTYLPERLSEMD 360
>gi|323139266|ref|ZP_08074320.1| DNA topoisomerase (ATP-hydrolyzing) [Methylocystis sp. ATCC 49242]
gi|322395487|gb|EFX98034.1| DNA topoisomerase (ATP-hydrolyzing) [Methylocystis sp. ATCC 49242]
Length = 377
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 170/353 (48%), Gaps = 19/353 (5%)
Query: 93 IETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKST 152
IE++ ++ +I +G+ + + P+R N Y + L +R +++T R
Sbjct: 20 IESIANKVRDAIASGSLPNIRTPARGLENVTYDEAAGYLELGRIERVRTL-TVNTARSFA 78
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVKL----FQDQTQSDAVLDDVACIL---GCTR 205
+++++ + N TKR+ +Y F +Q +SDA++DD+ I G +R
Sbjct: 79 QMLRLMAASRTMVESNDFATKREAYYISKNWGDCRFDEQAESDAIMDDIEAIASRHGLSR 138
Query: 206 SSLNVI-AAEKGVVVGRLIFSDNGDM------IDCTKMGMGGKAIPPNIDRVGDMQSDAM 258
+L + G V GR++ D + IDC +G G IP + + + ++DA
Sbjct: 139 ENLRFYPESHGGSVAGRVVIVDRNAVTGEPIEIDCANLGSGAYTIPRSAEHL-RFRTDAR 197
Query: 259 FILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSD 318
FIL +E + RL RF+ C+IV G P ATR F+R + LPV VD D
Sbjct: 198 FILAIETGGMFQRLNNHRFWESARCVIVEMGGVPTRATRRFIRLLSDRHDLPVYCFVDCD 257
Query: 319 PYGL-KILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKT 377
PYG I GS N ++ + L P ++LG+ P D+ + + + P+T D+K
Sbjct: 258 PYGFTNIYRTLKAGSGNAAHVNRFLCVPRARFLGVTPQDIIDFGLQDATH-PLTPVDVKR 316
Query: 378 GKDLLEED-FVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
KD L D F+ +P W + ++ +AE QAL+ +G Y+ + YLP KL
Sbjct: 317 AKDALSNDPFIIAHPQWTAAIRQLLDMGVRAEQQALAKWGLNYVIDEYLPRKL 369
>gi|383624785|ref|ZP_09949191.1| DNA topoisomerase VI subunit A [Halobiforma lacisalsi AJ5]
gi|448697205|ref|ZP_21698283.1| DNA topoisomerase VI subunit A [Halobiforma lacisalsi AJ5]
gi|445781584|gb|EMA32436.1| DNA topoisomerase VI subunit A [Halobiforma lacisalsi AJ5]
Length = 363
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 169/330 (51%), Gaps = 16/330 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
VP+R +N Y E D V D+ + R S+ RK V + + T
Sbjct: 34 VPTRTKNNIEYDEEKDVWVYGDRESTRSANSVRGARKLLKAVYTIEFLADQLDEGRSSTL 93
Query: 174 RDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y + F DQ +S+ +++D+ + G TR ++ E G ++G L +
Sbjct: 94 RELYYLSESWDNEEAQFSDQDESNQLVEDLEIVSGATREDFHMRPEESGATIMGPLHLRE 153
Query: 227 N---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
G+ I C K +G GG IP N D + + DA FIL VE RL E+ F + +
Sbjct: 154 QTRRGEREIHCQKDVGEGGYQIPNNPDTIEFLDCDADFILAVETGGMRDRLVENGFDDEY 213
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
+IV KGQP ATR +++ EL LPV D DP+ +I GS ++ S
Sbjct: 214 NALIVHLKGQPARATRRITKRLHDELDLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEY 273
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ +++GI+P+D+ +Y++P P+++ D+ + LE+ + + W E++ L +
Sbjct: 274 LATPEAQFIGIQPADIVEYELPTD---PLSDSDVNALESELEDPRFQTDY-WEEQIELQL 329
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+ ++K+E Q+L+S G +++E YLP +L +
Sbjct: 330 EIEKKSEQQSLASHGLDFVTETYLPERLDE 359
>gi|347832663|emb|CCD48360.1| hypothetical protein [Botryotinia fuckeliana]
Length = 496
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 156/295 (52%), Gaps = 11/295 (3%)
Query: 129 DRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQT 188
++ VL + P +S K ++IL L H+ + +TKRD++Y D +LF Q
Sbjct: 190 NKEVLGSRIVQFPSSSPREAWKFVALLRILELSHEALVTGNIITKRDMYYRDPELFTKQA 249
Query: 189 QSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFS-DNGDMIDCTKMGMGGKAIPPNI 247
D +DD+AC LG R +LNV+A KG+V G + N +D + + P +
Sbjct: 250 IVDRFVDDIACTLGLKRDALNVMATAKGLVTGWFVMKRRNQSAMDYS--SAADSQLVPWV 307
Query: 248 DRVGDMQ-SDAMFILLVEKDAAYIRLAEDRFYNRFPC---IIVTAKGQPDVATRLFLRKM 303
+ DM S +IL++EK+A + LAE R++ I++TAKG PD+ +R FL +
Sbjct: 308 REIEDMNLSHVKWILVIEKEATFRTLAEKRYWEYSTAGRGILLTAKGYPDIQSRQFLHYL 367
Query: 304 KMELKL-PVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKI 362
+ P+ ALVD DP G+ I+S Y GS +++++ L+ P + WLG+R D+ +
Sbjct: 368 AKHYPMVPIYALVDFDPDGIGIMSTYKHGSVALAHENEGLSVPFMHWLGLRSKDMMQGGK 427
Query: 363 PEQCRLPMTEQDIKTGKDLLEEDFVKK---NPGWVEELNLMVKTKQKAEIQALSS 414
+ L +TE+D + +L+ D ++ W E+ +M+ +KAEIQ + +
Sbjct: 428 ENEGLLKLTERDRRLAVKMLQRDLCQEYGDEHEWRREIQVMLMLNKKAEIQIIGN 482
>gi|397772615|ref|YP_006540161.1| DNA topoisomerase [Natrinema sp. J7-2]
gi|448340243|ref|ZP_21529216.1| DNA topoisomerase VI subunit A [Natrinema gari JCM 14663]
gi|397681708|gb|AFO56085.1| DNA topoisomerase [Natrinema sp. J7-2]
gi|445630549|gb|ELY83810.1| DNA topoisomerase VI subunit A [Natrinema gari JCM 14663]
Length = 363
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 167/330 (50%), Gaps = 16/330 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
VP+R +N Y E+D V D+ + R S+ RK V + + + T
Sbjct: 34 VPTRTKNNIEYDEEMDVWVYGDRESTRSANSVRGARKLLKAVYTIEFLADQLEADRSSTL 93
Query: 174 RDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y D F DQ +S+++++D+ + G TR ++ E G ++G L +
Sbjct: 94 RELYYLSESWDNDEAQFNDQDESNSMVEDLEIVSGVTREDFHMRPEESGATLMGPLHLRE 153
Query: 227 N---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
G+ I C + +G GG IP N D + + DA FIL VE RL E+ F +
Sbjct: 154 QTRRGEREIHCQEDVGEGGYQIPNNPDTIEFLDCDADFILAVETGGMRDRLVENGFDEEY 213
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
+IV KGQP ATR +++ EL LPV D DP+ +I GS ++ S
Sbjct: 214 NALIVHLKGQPARATRRITKRLHDELGLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEY 273
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ ++GI+P+D+ +Y++P P+++ DI + L ED + W E++ L +
Sbjct: 274 LATPEADFIGIQPADIVEYELPTD---PLSDSDINALESEL-EDPRFQTEYWEEQIELQL 329
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+K+E Q+L+S G +++E YLP +L +
Sbjct: 330 DLGKKSEQQSLASHGLDFVTETYLPERLDE 359
>gi|110760973|ref|XP_001122679.1| PREDICTED: meiotic recombination protein SPO11 [Apis mellifera]
Length = 400
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 164/302 (54%), Gaps = 19/302 (6%)
Query: 142 FASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVK------LFQDQTQSDAVLD 195
FAS K + + +++ H+L + N +T+R L+Y D+K L +Q D +
Sbjct: 110 FASKRGKDKFALMMTVMATAHRLLITNTTLTRRSLYY-DLKNENTSNLVPEQRCLDQAVH 168
Query: 196 DVACILGCTRSSLNVIAAEKGVVVGRLIFS--DNGDMIDCTKMGMGGKAIPPNIDRVGDM 253
VA +L C LN++ KG+V G L + DN +IDCT G G IP V
Sbjct: 169 HVANLLNCAPWDLNLLPTSKGLVAGELTLTLADN-RVIDCTVPG--GALIPHLASNVISA 225
Query: 254 QSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLA 313
+S A +L+VEKD+ + +L ED + CI+VT KG PDVATR+ ++ + +L+LPV
Sbjct: 226 RSRARLVLIVEKDSVFQKLLEDDCTSSLNCILVTGKGYPDVATRMLVKLLSEKLELPVYI 285
Query: 314 LVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQ 373
+VD+DP+G+ I+ VY GS +S + +L +++WLG+ PS+L + P+TE
Sbjct: 286 IVDADPFGIDIMCVYRFGSAALSRERESLACSNVRWLGVHPSELLALGVNTA---PLTEF 342
Query: 374 DIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKD 433
D+ L E ++ EL +M K KAEI+ +SS ++L YLP K++ D
Sbjct: 343 DLSKLTAL--EGRPYTTAAFLGELGVMRKLG-KAEIENVSS-SRKFLVSTYLPCKIKGND 398
Query: 434 WL 435
++
Sbjct: 399 YV 400
>gi|295666744|ref|XP_002793922.1| meiotic recombination protein spo11 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226277575|gb|EEH33141.1| meiotic recombination protein spo11 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 398
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 171/324 (52%), Gaps = 36/324 (11%)
Query: 137 TTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDD 196
T P ++ + I ++I+ I + N +KRD++Y D F Q+ D +DD
Sbjct: 80 TYFWPGKTVQEGWRFAILLRIMGHISEAINGNFISSKRDIYYLDPVYFGSQSVVDRCIDD 139
Query: 197 VACILGCTRSSLNVIAAEKGVVVGR--LIFSDNGDMIDC---TKMGMGGKAIPPNIDRVG 251
+AC +G RS+L+V AA KG+ VGR + +DN ID ++GM + P ++ V
Sbjct: 140 IACTIGVDRSALHVAAAAKGLAVGRFNVTLNDNS-TIDADLHAEVGM----LVPRVETVK 194
Query: 252 DMQSDAM-FILLVEKDAAYIRLAEDRFYN---RFPCIIVTAKGQPDVATRLFLRKMKMEL 307
++ A+ +IL++EK+A + RLA ++ P I++T KG PD+ TR FLR + L
Sbjct: 195 NVDLSAVQWILVIEKEATFRRLATANYHKTSAAGPGIMITGKGYPDLCTRAFLRLLSHTL 254
Query: 308 KLP------------VLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPS 355
LP + VDSDP G+ I+S Y GSK ++++ NLT DI+W G++ S
Sbjct: 255 PLPSALGPSPSSPPPIYMFVDSDPDGMAIMSTYKYGSKAQAHENNNLTVSDIQWFGLQSS 314
Query: 356 DL----DKYKIPEQCRLPMTEQDIKTGKDLLEEDFV----KKNPGWVEELNLMVKTKQKA 407
++ D + + +P+T +D K +D+L + V P W EL M+ + KA
Sbjct: 315 EVVPKRDAHTQDDDVLIPLTLRDRKKAQDMLARNPVFAEDGPEPAWRAELQHMLMSNVKA 374
Query: 408 EIQALSSFGFQYLSEVYLPLKLQQ 431
EI+ L + + E +L LKL++
Sbjct: 375 EIEVL--YEREEGVEKWLDLKLRK 396
>gi|448352990|ref|ZP_21541768.1| DNA topoisomerase VI subunit A [Natrialba hulunbeirensis JCM 10989]
gi|445641057|gb|ELY94140.1| DNA topoisomerase VI subunit A [Natrialba hulunbeirensis JCM 10989]
Length = 362
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 167/328 (50%), Gaps = 16/328 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
VP+R +N Y E+D V D+ + R S+ RK V + + + T
Sbjct: 33 VPTRTKNNIEYDEEMDVWVYGDRESTRSANSVRGARKLLKAVYTIEFLADQLEEDRSSTL 92
Query: 174 RDLFYTDVKL------FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y F DQ +S+ +++D+ + G TR ++ E G ++G L +
Sbjct: 93 RELYYLSESWDNKEAQFNDQDESNGLIEDLEIVSGVTREDFHMRPEESGATLMGPLHLRE 152
Query: 227 N---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
G+ I C + +G GG IP N D + + +DA FIL VE RL E+ F +
Sbjct: 153 QTRRGEREIHCQEDVGEGGYQIPNNPDTIEFLGTDADFILAVETGGMRDRLVENGFDEEY 212
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
+IV KGQP ATR +++ EL LPV D DP+ +I GS ++ S
Sbjct: 213 NALIVHLKGQPARATRRITKRLHDELDLPVTVFADGDPWSYRIYGSVAYGSIKSAHLSEY 272
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ +++GI+P+D+ +Y +P P+++ DI + L ED + W E++ L +
Sbjct: 273 LATPEAQYIGIQPADIVEYDLPTD---PLSDSDINALESEL-EDPRFQTEYWEEQIELQL 328
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKL 429
+ ++K+E Q+L+S G ++++ YLP +L
Sbjct: 329 EIEKKSEQQSLASHGLDFVTDTYLPERL 356
>gi|449464882|ref|XP_004150158.1| PREDICTED: meiotic recombination protein SPO11-1-like [Cucumis
sativus]
Length = 204
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 114/184 (61%), Gaps = 1/184 (0%)
Query: 250 VGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKL 309
+ + S A +IL+VEK++ + RLA DRF +R CI++T +G PDV +R FLR + L L
Sbjct: 15 INYITSAADYILVVEKESVFQRLANDRFCSRNRCIVITGRGYPDVPSRRFLRLLVDVLAL 74
Query: 310 PVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLP 369
P LVD DPYG IL+ Y GS M+YD+ L P ++WLG SD +KY +PEQC +P
Sbjct: 75 PAFCLVDCDPYGFDILTTYRFGSMQMAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIP 134
Query: 370 MTEQDIKTGKDLLEEDFVKKN-PGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLK 428
+T +D + LL+ ++++ W EL M++ K EI+ALS +LS+ YLP K
Sbjct: 135 LTFKDKSRTEALLQRCYLRREVQHWRLELESMLERGVKFEIEALSVHNISFLSDEYLPSK 194
Query: 429 LQQK 432
++ +
Sbjct: 195 IESE 198
>gi|170033806|ref|XP_001844767.1| meiotic recombination protein spo11 [Culex quinquefasciatus]
gi|167874844|gb|EDS38227.1| meiotic recombination protein spo11 [Culex quinquefasciatus]
Length = 411
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 154/282 (54%), Gaps = 9/282 (3%)
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIA 212
+ + ++S I +L +KR+L+Y D +L Q D L DV +L LNV +
Sbjct: 120 LIIFLMSEIFKLLTLRTSCSKRELYYRDPQLTHSQRTVDKGLQDVCFLLEANLWELNVFS 179
Query: 213 AEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIR 271
+ KG+V G L F S + +M+DC G IP ++ + ++ DA +L+VEKD + R
Sbjct: 180 SSKGLVAGPLKFRSKHQEMVDCH--NSLGTLIPADVLGLMEISVDAEMVLIVEKDTVFRR 237
Query: 272 LAEDRFYNRFP--CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYG 329
L EDR +R ++VT+KG PDV TRL L+K+ ++P+ ALVD+DP+G++I VY
Sbjct: 238 LLEDRILDRMSRKLLLVTSKGYPDVGTRLLLQKIWTTYRIPMFALVDADPFGIEIYCVYK 297
Query: 330 CGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFV-K 388
GS +S+ S L P I+W+G+RPS + + P+ +D +LL+ ++ K
Sbjct: 298 FGSLALSHQSQYLAVPAIRWIGVRPSHIPLLGLKPL---PLNGRDRARIDELLKRPYIGK 354
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
EL LM + KAEI++L YL YLP +L+
Sbjct: 355 AGCELARELRLMSELDVKAEIESLVDISTDYLINDYLPAQLK 396
>gi|448391960|ref|ZP_21567055.1| DNA topoisomerase VI subunit A [Haloterrigena salina JCM 13891]
gi|445665372|gb|ELZ18050.1| DNA topoisomerase VI subunit A [Haloterrigena salina JCM 13891]
Length = 363
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 173/333 (51%), Gaps = 22/333 (6%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRK---STITVKILSLIHQLCLRNIH 170
VP+R +N Y E D V D+ + R S+S RK +T T+ L + QL ++
Sbjct: 34 VPTRTKNNIEYDEESDVWVYGDRESTRSANSVSGARKLLKATYTIDFL--VEQLE-QDRS 90
Query: 171 VTKRDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLI 223
T R+L+Y D F Q +S+++++D+ + G TR ++ E G V+G L
Sbjct: 91 STLRELYYLSESWDNDEAQFTSQDESNSMVEDLEIVSGVTREDFHMRPEESGAKVMGPLH 150
Query: 224 FSDN---GDM-IDCT-KMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFY 278
+ GD I C +G GG IP N D + + +DA F+L VE RL E+ F
Sbjct: 151 IREQTKRGDRDIHCQLDVGQGGYQIPNNPDMIEFLDNDADFVLCVETGGMRDRLVENGFD 210
Query: 279 NRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYD 338
+ I+V GQP ATR ++ EL LPV+ D DP+ +I GS ++
Sbjct: 211 EEYDAIVVHLGGQPARATRRLTKRFHDELGLPVVVFTDGDPWSYRIYGSVAYGSIKSAHL 270
Query: 339 SANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELN 398
S L TP+ K++GI+P+D+ +Y +P P+++ DI + LE+ + + W E++
Sbjct: 271 SEYLATPEAKFIGIQPADIVEYDLPTD---PLSDSDINALESELEDPRFQTDY-WEEQIE 326
Query: 399 LMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
L + ++K+E Q+L+S G ++++ YLP +L +
Sbjct: 327 LQLDIEKKSEQQSLASHGLDFVTDTYLPERLSE 359
>gi|195487129|ref|XP_002091779.1| GE12053 [Drosophila yakuba]
gi|194177880|gb|EDW91491.1| GE12053 [Drosophila yakuba]
Length = 331
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 187/347 (53%), Gaps = 25/347 (7%)
Query: 92 TIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKS 151
+IE + L++ +++ GN + +VP ++ N + E R+ + + F L
Sbjct: 7 SIERIALELLSNLVQGNA-TLRVPRNSAGNM--ITEYRRVSYNNHGSRHSFCLL------ 57
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ +LS +H+L +R T R L+Y + L + Q++ DV +L + L ++
Sbjct: 58 ---IYMLSRVHRLQVRGGSFTVRGLYYDNPLLIRSQSRIAEARLDVCRMLSTSPLRLGIL 114
Query: 212 AAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYI 270
AA KG+V G L + NGD++D + G G +P + +++ +++ A F+L+VEK++ +
Sbjct: 115 AASKGLVAGDLRLLMTNGDVLDSSLYG-GPMTLPTDPEKIDRIETQAEFVLIVEKESVFE 173
Query: 271 RLAEDRFYNRFP--CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVY 328
L + F I++T KG PD TR + ++ ME +L LVD+DP+G++I+ VY
Sbjct: 174 SLLSRNVFGTFKRRFILITGKGYPDCCTRRIVHRLTMENQLSAYILVDADPFGVEIMLVY 233
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVK 388
GS++MS+ S LTTP ++W+G+ PS++ + + D K DLL + ++
Sbjct: 234 RHGSQSMSFSSQGLTTPALRWIGLHPSEIPALG---TVAVALVAGDNKKINDLLARNDLE 290
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
PG +EL ++ + KAEI+++ F L++ Y+P K+ + +L
Sbjct: 291 --PGVRQELRMLQDVQLKAEIESVVDF----LTDDYIPNKINRNLFL 331
>gi|449470576|ref|XP_004152992.1| PREDICTED: meiotic recombination protein SPO11-1-like, partial
[Cucumis sativus]
Length = 187
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/181 (42%), Positives = 113/181 (62%), Gaps = 1/181 (0%)
Query: 253 MQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVL 312
+ S A +IL+VEK++ + RLA DRF +R CI++T +G PDV +R FLR + L LP
Sbjct: 1 ITSAADYILVVEKESVFQRLANDRFCSRNRCIVITGRGYPDVPSRRFLRLLVDVLALPAF 60
Query: 313 ALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTE 372
LVD DPYG IL+ Y GS M+YD+ L P ++WLG SD +KY +PEQC +P+T
Sbjct: 61 CLVDCDPYGFDILTTYRFGSMQMAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTF 120
Query: 373 QDIKTGKDLLEEDFVKKN-PGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+D + LL+ ++++ W EL M++ K EI+ALS +LS+ YLP K++
Sbjct: 121 KDKSRTEALLQRCYLRREVQHWRLELESMLERGVKFEIEALSVHNISFLSDEYLPSKIES 180
Query: 432 K 432
+
Sbjct: 181 E 181
>gi|448346429|ref|ZP_21535314.1| DNA topoisomerase VI subunit A [Natrinema altunense JCM 12890]
gi|445632632|gb|ELY85843.1| DNA topoisomerase VI subunit A [Natrinema altunense JCM 12890]
Length = 363
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 167/330 (50%), Gaps = 16/330 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
VP+R +N Y E+D V D+ + R S+ RK V + + + T
Sbjct: 34 VPTRTKNNIEYDEEMDVWVYGDRESTRSANSVRGARKLLKAVYTIEFLADQLEEDRSSTL 93
Query: 174 RDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y D F DQ +S+++++D+ + G TR ++ E G ++G L +
Sbjct: 94 RELYYLSESWDNDEAQFNDQDESNSMVEDLEIVSGVTREDFHMRPEESGATLMGPLHLRE 153
Query: 227 N---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
G+ I C + +G GG IP N D + + DA FIL VE RL E+ F +
Sbjct: 154 QTRRGEREIHCQEDVGEGGYQIPNNPDTIEFLDCDADFILAVETGGMRDRLVENGFDEEY 213
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
+IV KGQP ATR +++ EL LPV D DP+ +I GS ++ S
Sbjct: 214 DALIVHLKGQPARATRRITKRLHDELGLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEY 273
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ ++GI+P+D+ +Y++P P+++ DI + L ED + W +++ L +
Sbjct: 274 LATPEADFIGIQPADIVEYELPTD---PLSDSDINALESEL-EDPRFQTEYWEKQIELQL 329
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+K+E Q+L+S G +++E YLP +L +
Sbjct: 330 DLGKKSEQQSLASHGLDFVTETYLPERLDE 359
>gi|15790022|ref|NP_279846.1| DNA topoisomerase VI subunit A [Halobacterium sp. NRC-1]
gi|169235745|ref|YP_001688945.1| DNA topoisomerase VI subunit A [Halobacterium salinarum R1]
gi|13124612|sp|Q9HR32.1|TOP6A_HALSA RecName: Full=Type II DNA topoisomerase VI subunit A
gi|229558493|sp|B0R4D2.1|TOP6A_HALS3 RecName: Full=Type 2 DNA topoisomerase 6 subunit A; AltName:
Full=Type II DNA topoisomerase VI subunit A
gi|10580448|gb|AAG19326.1| DNA topoisomerase VI subunit A [Halobacterium sp. NRC-1]
gi|167726811|emb|CAP13597.1| DNA topoisomerase VI subunit A [Halobacterium salinarum R1]
Length = 366
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 164/330 (49%), Gaps = 16/330 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
+P+R+ SN Y + D V D + R S+ RK +V + + Q T
Sbjct: 37 LPTRSKSNIEYDEDADVWVYGDSQSTRSANSVRGARKLLKSVYTVDFLAQQLDEGRSSTL 96
Query: 174 RDLFYTDVKL------FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y F DQ++SD +++D+ + G R ++ E G V+G L +
Sbjct: 97 RELYYLSESWDEAEAQFNDQSESDKLVEDLEIVSGVKREDFHMRPEESGAKVMGPLRLRE 156
Query: 227 N---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
GD I C + +G GG IP N D + + +DA F+L VE RL E+ F + +
Sbjct: 157 QTRRGDREIHCQEDVGQGGYQIPNNPDTIDFLDTDADFVLCVETGGMRDRLVENGFDDDY 216
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
I+V GQP ATR +++ EL LPV D DP+ +I GS ++ S
Sbjct: 217 NAIVVHLGGQPARATRRLTKRLHDELDLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEY 276
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP +++GIRP D+ Y +P P+++ D+ + LE+ + + W E++ L +
Sbjct: 277 LATPQAQFIGIRPQDIVDYDLPTD---PLSDSDVNALESELEDPRFQSD-FWTEQIGLQL 332
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+KAE QAL+S G ++++ YLP +L +
Sbjct: 333 DIDKKAEQQALASRGLDFVTDTYLPERLAE 362
>gi|284165559|ref|YP_003403838.1| DNA topoisomerase [Haloterrigena turkmenica DSM 5511]
gi|284015214|gb|ADB61165.1| DNA topoisomerase (ATP-hydrolyzing) [Haloterrigena turkmenica DSM
5511]
Length = 364
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 168/328 (51%), Gaps = 16/328 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
VP+R +N Y + + V D+ + R S+ RK V + + + T
Sbjct: 35 VPTRTKNNIEYDEDEEVWVYGDRESTRSANSVRGARKLLKAVYTIEFLADQLEEDRSSTL 94
Query: 174 RDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y D F DQ +S+++++D+ + G TR ++ E G ++G L +
Sbjct: 95 RELYYLSESWDNDEAQFNDQDESNSMVEDLEIVSGVTREDFHMRPEESGATIMGPLHLRE 154
Query: 227 N---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
G+ I C + +G GG IP N D + + DA FIL VE RL E+ F +
Sbjct: 155 QTRRGEREIHCQEDVGEGGYQIPNNPDTIDFLDCDADFILAVETGGMRDRLVENGFDEEY 214
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
+IV KGQP ATR +++ EL LPV D DP+ +I GS ++ S
Sbjct: 215 NALIVHLKGQPARATRRITKRLHDELDLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEY 274
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ K++GI+P+D+ +Y++P P+++ DI + LE+ + + W E++ L +
Sbjct: 275 LATPEAKFIGIQPADIVEYELPTD---PLSDSDINALESELEDPRFQTD-YWEEQIELQL 330
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKL 429
++K+E Q+L+S G ++++ YLP +L
Sbjct: 331 DIEKKSEQQSLASHGLDFVTDTYLPERL 358
>gi|145967204|gb|ABP98994.1| topoisomerase 6A, partial [Malawimonas jakobiformis]
Length = 188
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 104/172 (60%), Gaps = 11/172 (6%)
Query: 31 PDQAILETLKQLFLAATTTTTAAANGASTSSSSSKPLTLSDLSLSATCREVTDLSLSAVQ 90
D LE ++ L L T AA+ SK +T EV +L V
Sbjct: 28 ADGTELEKVRALRLKLETLAPRAASLGEIEGIDSKQIT-----------EVLELESDDVL 76
Query: 91 STIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRK 150
IE L++++ +L+G+G S+ P R+S N YV ELDRIVLKDK T R FA STVRK
Sbjct: 77 QRIEELVVKVVEQVLSGHGLSYTHPIRSSGNIGYVKELDRIVLKDKMTTREFAHTSTVRK 136
Query: 151 STITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILG 202
+ I ++L ++HQLC+ IHVTKRDLFYTDVKLFQ Q QSD VLDDVAC++G
Sbjct: 137 TAIMTRVLQIVHQLCISRIHVTKRDLFYTDVKLFQQQQQSDDVLDDVACMIG 188
>gi|448323107|ref|ZP_21512571.1| DNA topoisomerase VI subunit A [Natronococcus amylolyticus DSM
10524]
gi|445600293|gb|ELY54306.1| DNA topoisomerase VI subunit A [Natronococcus amylolyticus DSM
10524]
Length = 363
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 168/332 (50%), Gaps = 16/332 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
VP+R SN Y E V D+ + R S+ RK V + + ++ T
Sbjct: 34 VPTRTKSNIEYDEEKAVWVYGDRESTRSANSVRGARKLLKAVYTIEFLANQLEQDRSSTL 93
Query: 174 RDLFYTDVKL------FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y F DQ +S+ +++D+ + G TR ++ E G ++G L +
Sbjct: 94 RELYYLSESWDNKEAQFNDQDESNGLIEDLEIVSGVTREDFHMRPEESGATIMGPLHLRE 153
Query: 227 N---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
G+ I C + +G GG IP N D + + +DA FIL VE RL E+ F +
Sbjct: 154 QTRRGEREIHCQEDVGEGGYQIPNNPDTIEFLDADADFILAVETGGMRDRLVENGFDEEY 213
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
+IV KGQP ATR +++ EL LPV D DP+ +I GS ++ S
Sbjct: 214 NALIVHLKGQPARATRRITKRLHDELDLPVTVFADGDPWSYRIYGSVAYGSIKSAHLSEY 273
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ +++GI+P+D+ +Y +P P+++ DI + LE+ + + W E++ L +
Sbjct: 274 LATPEAQYIGIQPADIVEYDLPTD---PLSDSDINALESELEDPRFQTDY-WEEQIELQL 329
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQKD 433
+ +K+E Q+L++ G +++E YLP +L + D
Sbjct: 330 EIGKKSEQQSLAARGLDFVTETYLPERLSEMD 361
>gi|448339320|ref|ZP_21528348.1| DNA topoisomerase VI subunit A [Natrinema pallidum DSM 3751]
gi|445620549|gb|ELY74045.1| DNA topoisomerase VI subunit A [Natrinema pallidum DSM 3751]
Length = 363
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 168/330 (50%), Gaps = 16/330 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
VP+R +N Y E+ V D+ + R S+ RK V + + + T
Sbjct: 34 VPTRTKNNIEYDEEMAVWVYGDRESTRSANSVRGARKLLKAVYTIEFLADQLEEDRSSTL 93
Query: 174 RDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y D F DQ +S+++++D+ + G TR ++ E G ++G L +
Sbjct: 94 RELYYLSESWDNDEAQFNDQDESNSMVEDLEIVSGVTREDFHMRPEESGATLMGPLHLRE 153
Query: 227 N---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
G+ I C + +G GG IP N D + + DA FIL VE RL E+ F ++
Sbjct: 154 QTRRGEREIHCQEDVGEGGYQIPNNPDTIEFLDCDADFILAVETGGMRDRLVENGFDEQY 213
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
+IV KGQP ATR +++ EL LPV D DP+ +I GS ++ S
Sbjct: 214 NALIVHLKGQPARATRRITKRLHDELGLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEY 273
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ ++GI+P+D+ +Y++P P+++ DI + LE+ + + W E++ L +
Sbjct: 274 LATPEADFIGIQPADIVEYELPTD---PLSDSDINALESELEDPRFQTDY-WEEQIELQL 329
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+K+E Q+L+S G +++E YLP +L +
Sbjct: 330 DLGKKSEQQSLASHGLDFVTETYLPERLDE 359
>gi|289580321|ref|YP_003478787.1| DNA topoisomerase [Natrialba magadii ATCC 43099]
gi|448283992|ref|ZP_21475257.1| DNA topoisomerase VI subunit A [Natrialba magadii ATCC 43099]
gi|289529874|gb|ADD04225.1| DNA topoisomerase (ATP-hydrolyzing) [Natrialba magadii ATCC 43099]
gi|445572087|gb|ELY26629.1| DNA topoisomerase VI subunit A [Natrialba magadii ATCC 43099]
Length = 362
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 166/328 (50%), Gaps = 16/328 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
VP+R +N Y + D V D+ + R S+ RK V + + + T
Sbjct: 33 VPTRTKNNIEYDEDKDVWVYGDRESTRSANSVRGARKLLKAVYTIEFLADQLEEDRSSTL 92
Query: 174 RDLFYTDVKL------FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y F DQ +S+ +++D+ + G TR ++ E G ++G L +
Sbjct: 93 RELYYLSESWDNKEAQFNDQDESNGLIEDLEIVSGVTREDFHMRPEESGATLMGPLHLRE 152
Query: 227 N---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
G+ I C + +G GG IP N D + + +DA FIL VE RL E+ F +
Sbjct: 153 QTRRGEREIHCQEDVGEGGYQIPNNPDTIEFLGTDADFILAVETGGMRDRLVENGFDEEY 212
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
+IV KGQP ATR +++ EL LPV D DP+ +I GS ++ S
Sbjct: 213 NALIVHLKGQPARATRRITKRLHDELDLPVTVFADGDPWSYRIYGSVAYGSIKSAHLSEY 272
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ K++GI+P+D+ +Y +P P+++ DI + L ED + W E++ L +
Sbjct: 273 LATPEAKYIGIQPADIVEYDLPTD---PLSDSDINALESEL-EDPRFQTEYWEEQIELQL 328
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKL 429
+ ++K+E Q+L+S G ++++ YLP +L
Sbjct: 329 EIEKKSEQQSLASHGLDFVTDTYLPERL 356
>gi|303276490|ref|XP_003057539.1| type II DNA topoisomerase VI subunit A 1 [Micromonas pusilla
CCMP1545]
gi|226461891|gb|EEH59184.1| type II DNA topoisomerase VI subunit A 1 [Micromonas pusilla
CCMP1545]
Length = 409
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 152/271 (56%), Gaps = 24/271 (8%)
Query: 156 KILSLIHQLCLRNIHVTKRDLFY----TDVKLFQDQTQS--DAVLDDVACILGCTRSSLN 209
K+L+ +H +T+R L+Y KLF A L D +L CTR+++
Sbjct: 124 KLLATVHHHLSERRAITQRALYYLLCARHPKLFPPGRARLVAAALRDAVTLLNCTRAAMG 183
Query: 210 VIAAEKGVVVGR--LIFSDNG---DMIDCTKMGMGGKAIPPNIDRV--GDMQSDAMFILL 262
V +A +G V GR ++ ++G D D + + +P ++ V ++SDA F+L+
Sbjct: 184 VTSASRGQVAGRVAILTPEDGVWRDFSDASAHFV----VPGDVRAVERARLRSDARFVLI 239
Query: 263 VEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYG 321
VEKDAA+ +L +R + R PC++VTAKG PD+ATR FL+K E ++P+LALVD +P G
Sbjct: 240 VEKDAAFDKLCRERIHARVPCVLVTAKGFPDLATRAFLKKFASEFPRVPMLALVDWNPSG 299
Query: 322 LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDL 381
L IL Y GS + +++ D+KWLG+R +DL+ ++ + R P+TE D K++
Sbjct: 300 LLILRTYRAGSSGGALEASRYAL-DVKWLGVRRADLE--RVDARARQPLTELDKAKIKNM 356
Query: 382 LEEDFVKKNPGWVEELNLMVKTKQKAEIQAL 412
L + EL M+++ KAEI++L
Sbjct: 357 LAAE---TGASQASELRAMLESGMKAEIESL 384
>gi|449501862|ref|XP_004161479.1| PREDICTED: meiotic recombination protein SPO11-2-like [Cucumis
sativus]
Length = 346
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 152/261 (58%), Gaps = 15/261 (5%)
Query: 136 KTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDV----KLFQDQTQSD 191
++ +RP AS + VR K++ + Q+ +++ VT+R+LFY + F Q +
Sbjct: 87 RSLMRPNASKAFVR----VWKLMEMCSQILIQDKKVTQRELFYKLLCDSPVYFSTQLHVN 142
Query: 192 AVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIP--PNID 248
+ DV +L C+R SL ++A+ +G+V GRL+ + +++DCT G G I ++
Sbjct: 143 RTIQDVVALLQCSRYSLGIMASSRGLVAGRLLLQEPEQEVVDCTACGSSGYPISGDLDLL 202
Query: 249 RVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKM-KMEL 307
+ +++DA +I+++EK A + RLA+DR +NR P I++TAKG PD+ATR FL K+ K
Sbjct: 203 QTLTLKTDARYIIVIEKHAIFQRLADDRVFNRIPSILITAKGYPDLATRYFLHKICKTFS 262
Query: 308 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR 367
LP+ LVD +P GL IL + GS M ++ ++KWLG+R DL IP++
Sbjct: 263 HLPMFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYAC-NVKWLGVRGDDLQ--LIPQESL 319
Query: 368 LPMTEQDIKTGKDLLEEDFVK 388
+P+ +D++ K LL ++
Sbjct: 320 VPLKPRDLQIAKSLLSSKILQ 340
>gi|195335887|ref|XP_002034594.1| GM21963 [Drosophila sechellia]
gi|195359309|ref|XP_002045345.1| GM13291 [Drosophila sechellia]
gi|194126564|gb|EDW48607.1| GM21963 [Drosophila sechellia]
gi|194129425|gb|EDW51468.1| GM13291 [Drosophila sechellia]
Length = 331
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 185/347 (53%), Gaps = 25/347 (7%)
Query: 92 TIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKS 151
IE + L++ +++ GN + VP +S N + E R+ ++ + F L
Sbjct: 7 NIERIALELLSNLVHGNA-TLSVPRNSSGN--VISEYRRVSYNNRGSRHSFCVL------ 57
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ +LS +H+L +R T R L+Y + L + Q++ DV +L + SL ++
Sbjct: 58 ---IYMLSRVHRLQVRGGSFTVRGLYYDNPLLVRSQSRIAEARLDVCRMLSTSPLSLGIL 114
Query: 212 AAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYI 270
AA KG+V G L + NGD++D + G G +P + +++ +++ A F+L+VEK++ +
Sbjct: 115 AASKGLVAGDLRLLMTNGDVLDSSLYG-GPLTLPTDPEKIDRIETQAEFVLIVEKESVFE 173
Query: 271 RLAEDRFYNRFP--CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVY 328
L + F I++T KG PD TR + ++ E +L LVD+DP+G++I+ VY
Sbjct: 174 SLLSRNVFGTFKRRFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVY 233
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVK 388
GS++MS+ S LTTP ++W+G+ PS++ + + D K DLL ++
Sbjct: 234 RHGSQSMSFSSQELTTPALRWIGLHPSEIPALGTGV---VALVAGDNKKINDLLARHNLE 290
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
PG +EL ++ + KAEI+++ F L++ Y+P K+ + +L
Sbjct: 291 --PGVRQELRMLQDVQLKAEIESVIDF----LTDDYIPNKINRNLFL 331
>gi|449470533|ref|XP_004152971.1| PREDICTED: meiotic recombination protein SPO11-1-like [Cucumis
sativus]
Length = 204
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 113/184 (61%), Gaps = 1/184 (0%)
Query: 250 VGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKL 309
+ + S A +IL+VEK++ + RLA DRF +R CI++T +G PDV +R FLR + L
Sbjct: 15 INYITSAADYILVVEKESVFQRLANDRFCSRNRCIVITGRGYPDVPSRRFLRLLVDVSAL 74
Query: 310 PVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLP 369
P LVD DPYG IL+ Y GS M+YD+ L P ++WLG SD +KY +PEQC +P
Sbjct: 75 PAFCLVDCDPYGFDILTTYRFGSMQMAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIP 134
Query: 370 MTEQDIKTGKDLLEEDFVKKN-PGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLK 428
+T +D + LL+ ++++ W EL M++ K EI+ALS +LS+ YLP K
Sbjct: 135 LTFKDKSRTEALLQRCYLRREVQHWRLELESMLERGVKFEIEALSVHNISFLSDEYLPSK 194
Query: 429 LQQK 432
++ +
Sbjct: 195 IESE 198
>gi|307105917|gb|EFN54164.1| hypothetical protein CHLNCDRAFT_135583 [Chlorella variabilis]
Length = 423
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 135/266 (50%), Gaps = 12/266 (4%)
Query: 157 ILSLIHQLCLRNIHVTKRDLFY--TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAE 214
+L +H++ L + T+R+L+Y +++F+ + D +L RS+L + A+
Sbjct: 141 LLEAVHEMLLAGLQATQRELWYRFKTLEVFRSPRDVGEAIQDAVGMLQVPRSALGITASS 200
Query: 215 KGVVVGRLIFSDN--GDMIDCTKMGMGGKAIP---PNIDRVGDMQSDAMFILLVEKDAAY 269
KG+V GRL+ D G DC +G G IP +I R QSDA +++VEKDA +
Sbjct: 201 KGLVAGRLVVHDQRAGTETDCAALGGAGMQIPGDIAHISRHYAYQSDAQLVVVVEKDAVF 260
Query: 270 IRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKILSVY 328
RL + RF++ PCI+ T KG PD+ATR FL + LP++ LVD +P G IL VY
Sbjct: 261 QRLVQQRFFDAVPCILATGKGVPDLATRAFLSGLSEAFPDLPLVGLVDWNPAGANILCVY 320
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVK 388
GS M +S + + WLG R S L + L ++ + L
Sbjct: 321 RFGSARMG-ESQHYALRTLGWLGARSSQLQQADAGAFQELTARDRSMAAN---LSAVLRG 376
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSS 414
P W EL M+ + KAEI+AL +
Sbjct: 377 AAPEWAAELGRMLSSGSKAEIEALET 402
>gi|391331670|ref|XP_003740266.1| PREDICTED: meiotic recombination protein SPO11-like [Metaseiulus
occidentalis]
Length = 288
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 157/287 (54%), Gaps = 15/287 (5%)
Query: 157 ILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKG 216
+L +++ L RN T R +FY +VKLF++Q VL D+A +L C+R LNV++ KG
Sbjct: 3 VLKIVYSLLTRNEISTVRQIFYDNVKLFENQMNVSLVLHDIAKLLDCSRRDLNVVSTAKG 62
Query: 217 VVVGRLIF--SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRL-- 272
+V G L + D + IDC + + IP + V +++ A +L+VEKDA + +L
Sbjct: 63 LVCGNLRWKLEDCKEWIDCRSVPV---LIPNDFRAVEQVETSANVVLIVEKDAIFQKLLD 119
Query: 273 --AEDRFYN-RFPCIIVTAKGQPDVATRLFLRKMKMELKLPV---LALVDSDPYGLKILS 326
A F N ++VT KG PD+ TR + + L +P+ L D+D YG++I
Sbjct: 120 QDALTFFRNLNIDLLLVTGKGVPDLNTRQLIHILA-HLAIPLAKFFVLTDADAYGIEIAG 178
Query: 327 VYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDF 386
+Y GS +Y + N P I+W+G+ PS+++ + + + R+ + K ++LL +
Sbjct: 179 IYSFGSLVQAY-AENYGVPQIRWIGLLPSEIESFNMRPESRIVSSTMHQKRLQNLLVRPW 237
Query: 387 VKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKD 433
+K W +E+ ++ + KAEIQAL FG +L YL KL+ K+
Sbjct: 238 MKLRRQWYQEVLKLLSLRCKAEIQALDQFGHSFLLRTYLSDKLRGKE 284
>gi|195584887|ref|XP_002082235.1| GD11457 [Drosophila simulans]
gi|194194244|gb|EDX07820.1| GD11457 [Drosophila simulans]
Length = 331
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 184/347 (53%), Gaps = 25/347 (7%)
Query: 92 TIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKS 151
IE + L++ +++ GN + VP +S N + E R+ ++ + F L
Sbjct: 7 NIERIALELLSNLVHGNA-TLSVPRNSSGN--VISEYRRVSYNNRGSRHSFCVL------ 57
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ +LS +H+L +R T R L+Y + L + Q++ DV +L + SL ++
Sbjct: 58 ---IYMLSRVHRLQVRGGSFTVRGLYYDNPLLVRSQSRIAEARLDVCRMLSTSPLSLGIL 114
Query: 212 AAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYI 270
AA KG+V G L + NGD++D + G G +P + ++ +++ A F+L+VEK++ +
Sbjct: 115 AASKGLVAGDLRLLMTNGDVLDSSLYG-GPLTLPTDPAKIDRIETQAEFVLIVEKESVFE 173
Query: 271 RLAEDRFYNRFP--CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVY 328
L + F I++T KG PD TR + ++ E +L LVD+DP+G++I+ VY
Sbjct: 174 SLLSRNVFGTFKRRFILITGKGYPDCCTRRIVHRLTEENQLEAYILVDADPFGVEIMLVY 233
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVK 388
GS++MS+ S LTTP ++W+G+ PS++ + + D K DLL ++
Sbjct: 234 RHGSQSMSFSSQGLTTPALRWIGLHPSEIPALGTGA---VALVAGDNKKINDLLARHNLE 290
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
PG +EL ++ + KAEI+++ F L++ Y+P K+ + +L
Sbjct: 291 --PGVRQELRMLQDVQLKAEIESVIDF----LTDDYIPNKINRNLFL 331
>gi|448399836|ref|ZP_21571069.1| DNA topoisomerase VI subunit A [Haloterrigena limicola JCM 13563]
gi|445668289|gb|ELZ20919.1| DNA topoisomerase VI subunit A [Haloterrigena limicola JCM 13563]
Length = 363
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 166/330 (50%), Gaps = 16/330 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
VP+R +N Y E V D+ + R S+ RK V + + + T
Sbjct: 34 VPTRTKNNIEYDEEKAVWVYGDRESTRSANSVRGARKLLKAVYTIEFLADQLEADRSSTL 93
Query: 174 RDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y + F DQ +S+ +++D+ + G TR ++ E G ++G L +
Sbjct: 94 RELYYLSESWDNEEAQFSDQDESNGLIEDLEIVSGVTREDFHMRPEESGATLMGPLHLRE 153
Query: 227 N---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
G+ I C K +G GG IP N D + + DA FIL VE RL E+ F + +
Sbjct: 154 QTRRGEREIHCQKDVGEGGYQIPNNPDTIDFLDCDADFILAVETGGMRDRLVENGFDDEY 213
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
+IV KGQP ATR +++ EL LPV D DP+ +I GS ++ S
Sbjct: 214 NALIVHLKGQPARATRRITKRLHDELDLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEY 273
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ +++GI+P+D+ +Y +P P+++ DI + LE+ + + W E++ L +
Sbjct: 274 LATPEAQFIGIQPADIVEYDLPTD---PLSDSDINALESELEDPRFQTDY-WEEQIELQL 329
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+K+E QAL+S G +++E YLP +L +
Sbjct: 330 DLGKKSEQQALASHGLDFVTETYLPERLTE 359
>gi|45552753|ref|NP_995901.1| meiotic W68 [Drosophila melanogaster]
gi|3599483|gb|AAC61735.1| MEI-W68 [Drosophila melanogaster]
gi|7302468|gb|AAF57553.1| meiotic W68 [Drosophila melanogaster]
gi|289666809|gb|ADD16459.1| RT05903p [Drosophila melanogaster]
Length = 331
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 185/347 (53%), Gaps = 25/347 (7%)
Query: 92 TIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKS 151
IE + L++ +++ GN + VP +S N + E R+ ++ + F L
Sbjct: 7 NIERIALELLSNLVHGNA-TLSVPRNSSGN--VISEYRRVSYNNRGSRHSFCVL------ 57
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ +LS +H+L +R T R L+Y + L + Q++ DV +L + SL ++
Sbjct: 58 ---IYMLSRVHRLQVRGGSFTVRGLYYDNPLLVRSQSRIAEARLDVCRMLRTSPLSLGIL 114
Query: 212 AAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYI 270
AA KG+V G L + NGD++D + G G +P + +++ +++ A F+L+VEK++ +
Sbjct: 115 AASKGLVAGDLRLLMTNGDVLDSSLYG-GPLTLPTDPEKIDRIETLAEFVLIVEKESVFE 173
Query: 271 RLAEDRFYNRFP--CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVY 328
L + F I++T KG PD TR + ++ E +L LVD+DP+G++I+ VY
Sbjct: 174 SLLSRNVFGTFERRFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVY 233
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVK 388
GSK+MS+ S LTTP ++W+G+ PS++ + + D K DLL ++
Sbjct: 234 RHGSKSMSFSSQGLTTPALRWIGLHPSEIPALGTGA---VALVAGDNKKINDLLARHDLE 290
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
PG +EL ++ + KAEI+++ F L++ Y+P K+ + +L
Sbjct: 291 --PGVRQELRMLQDVQLKAEIESVIDF----LTDDYIPNKINRNLFL 331
>gi|344211460|ref|YP_004795780.1| DNA topoisomerase VI subunit A [Haloarcula hispanica ATCC 33960]
gi|448667080|ref|ZP_21685681.1| DNA topoisomerase VI subunit A [Haloarcula amylolytica JCM 13557]
gi|343782815|gb|AEM56792.1| DNA topoisomerase VI subunit A [Haloarcula hispanica ATCC 33960]
gi|445770602|gb|EMA21661.1| DNA topoisomerase VI subunit A [Haloarcula amylolytica JCM 13557]
Length = 368
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 167/330 (50%), Gaps = 16/330 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
+P+R SN ++ + V D+ + R ++S K V + + Q + T
Sbjct: 39 IPTRTKSNIVFDEDEQVWVYGDRNSTRSAKTISGAEKILKAVYTIDFLSQQLEEDRSSTL 98
Query: 174 RDLFYT------DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIF-- 224
R+L+Y D F Q +S+ +++D+ + R ++ E G V+G L+
Sbjct: 99 RELYYLSESWDLDEAQFNTQDESNNLIEDLEIVSDVKREDFHMRPEESGAKVMGPLLLRE 158
Query: 225 -SDNGDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
++ GD I C +G GG IP N D + + +DA F+L VE RL E+ F + +
Sbjct: 159 QTNRGDREIHCQDDVGQGGYQIPNNPDTIEFLDNDAKFVLCVETGGMRDRLVENGFDDEY 218
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
++V GQP ATR ++++ EL LPV D DP+ +I GS ++ S
Sbjct: 219 DALVVHLGGQPARATRRLIKRLHDELDLPVTVFTDGDPWSYRIFGSVSYGSIKSAHLSEY 278
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ +++GIRP D+ +Y++P P+++ D+ + LE+ + + W E++ L +
Sbjct: 279 LATPEAQFIGIRPEDIVEYELPTD---PLSDSDVNALESELEDPRFQTD-FWEEQIELQL 334
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+KAE QAL+S G +++E YLP +L +
Sbjct: 335 DINKKAEQQALASRGLDFVTETYLPERLDE 364
>gi|300711732|ref|YP_003737546.1| DNA topoisomerase VI subunit A [Halalkalicoccus jeotgali B3]
gi|448296159|ref|ZP_21486220.1| DNA topoisomerase VI subunit A [Halalkalicoccus jeotgali B3]
gi|299125415|gb|ADJ15754.1| DNA topoisomerase VI subunit A [Halalkalicoccus jeotgali B3]
gi|445582882|gb|ELY37222.1| DNA topoisomerase VI subunit A [Halalkalicoccus jeotgali B3]
Length = 363
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 180/366 (49%), Gaps = 17/366 (4%)
Query: 82 TDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRP 141
TD A + IE L + G+ +P+R SN Y + V D+T+ R
Sbjct: 3 TDTPHDAREQLIE-LAAEFYDQFADGDVPEMSIPTRTKSNIEYDEDSQVWVYGDRTSTRS 61
Query: 142 FASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFY------TDVKLFQDQTQSDAVLD 195
S+ RK + + + + T R+L+Y + F DQ +S+ +++
Sbjct: 62 ANSVRGARKLLKAIYTIDFLADQLGEDRSSTLRELYYLSESWDNEEAQFNDQDESNQLVE 121
Query: 196 DVACILGCTRSSLNVIAAEKGV-VVGRLIFSDN---GD-MIDCTK-MGMGGKAIPPNIDR 249
D+ + TR ++ E G ++G L + G+ +I C + +G GG IP N D
Sbjct: 122 DLEIVSSVTREDFHMRPEESGATLMGPLELREQTRRGERVIHCQEDVGEGGYQIPNNPDT 181
Query: 250 VGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKL 309
+ + +DA F+L VE RL E+ F + IIV KGQP ATR +++ EL L
Sbjct: 182 IEFLDNDADFVLAVETGGMRDRLVENGFDEEYNVIIVHLKGQPARATRRITKRLHDELDL 241
Query: 310 PVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLP 369
PV D DP+ +I GS ++ S L TP+ +++GI+P+D+ +Y +P P
Sbjct: 242 PVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAQFIGIQPTDIVEYDLPTD---P 298
Query: 370 MTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
+++ D+ ++ LE+ + + W E++ L ++ +KAE QAL+S G ++++ YLP +L
Sbjct: 299 LSDSDVNALENELEDPRFQTD-YWTEQIELQLEIGKKAEQQALASRGLDFVTDTYLPERL 357
Query: 430 QQKDWL 435
D L
Sbjct: 358 AAMDVL 363
>gi|448309742|ref|ZP_21499597.1| DNA topoisomerase VI subunit A [Natronorubrum bangense JCM 10635]
gi|445589408|gb|ELY43641.1| DNA topoisomerase VI subunit A [Natronorubrum bangense JCM 10635]
Length = 363
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 168/330 (50%), Gaps = 16/330 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
VP+R +N Y + D V D+ + R S+ RK V + + + T
Sbjct: 34 VPTRTKNNIEYDEDKDVWVYGDRESTRSANSVRGARKLLKAVYTIEFLANQLEEDRSSTL 93
Query: 174 RDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y + F DQ +S+ +++D+ + G TR ++ E G ++G L +
Sbjct: 94 RELYYLSESWDNNEAQFSDQDESNGLIEDLEIVSGVTREDFHMRPEESGATIMGPLHLRE 153
Query: 227 N---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
G+ I C + +G GG IP N D + + DA FIL VE RL E+ F + +
Sbjct: 154 QTRRGERDIHCQEDVGEGGYQIPNNPDTIEFLDCDADFILAVETGGMRDRLVENGFDDEY 213
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
+IV KGQP ATR ++++ EL LPV D DP+ +I GS ++ S
Sbjct: 214 NALIVHLKGQPARATRRIIKRLHDELDLPVTVFADGDPWSYRIYGSVAYGSIKSAHLSEY 273
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP +++GI+P+D+ +Y +P P+++ DI + LE+ + + W E++ L +
Sbjct: 274 LATPAAQYIGIQPADIVEYDLPTD---PLSDSDINALESELEDPRFQTDY-WEEQIELQL 329
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+ +K+E Q+L++ G +++E YLP +L +
Sbjct: 330 EIGKKSEQQSLAARGLDFVTETYLPERLSE 359
>gi|123407440|ref|XP_001303010.1| Type IIB DNA topoisomerase family protein [Trichomonas vaginalis
G3]
gi|121884352|gb|EAX90080.1| Type IIB DNA topoisomerase family protein [Trichomonas vaginalis
G3]
Length = 384
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 162/284 (57%), Gaps = 11/284 (3%)
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIA 212
+ +++L++I+ ++KR ++Y + LF Q + ++ + L R+SL VI+
Sbjct: 111 VFLRVLAVIYHSLQNGEVISKRSIYYREPSLFGSQESVNQAIESICRSLEVNRTSLGVIS 170
Query: 213 AEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIR 271
K V G L + D +G++ID + IP +D++ + ++A+ ++++EK++ ++R
Sbjct: 171 CPKSFVAGPLKWEDASGNIIDVST---HIAPIPALVDQIIKVSTNAIAVMVIEKESIFMR 227
Query: 272 LAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCG 331
L + + I++T +G PD TR F+R + L +P++ L D D YG+ I+ ++ G
Sbjct: 228 LVQSKIVTE--VILITPRGVPDYNTRYFVRLLDDSLSIPIVGLFDGDAYGIFIMHLFKYG 285
Query: 332 SKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNP 391
S + + D + P + WLGIRPSDL+ E L +T+++ K +++L D + +
Sbjct: 286 SMSAAQDGHAMACPHMMWLGIRPSDLNFLSSNEM--LTITDKEEKILRNILTFDHLSEE- 342
Query: 392 GWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
W +E+ L+++TK+KAEI+AL + YL ++YLP K DW+
Sbjct: 343 -WKKEIKLILETKRKAEIEALCN-STNYLIDLYLPQKFANHDWI 384
>gi|55377344|ref|YP_135194.1| DNA topoisomerase VI subunit A [Haloarcula marismortui ATCC 43049]
gi|448640229|ref|ZP_21677283.1| DNA topoisomerase VI subunit A [Haloarcula sinaiiensis ATCC 33800]
gi|448649278|ref|ZP_21679991.1| DNA topoisomerase VI subunit A [Haloarcula californiae ATCC 33799]
gi|68053279|sp|Q5V4R4.1|TOP6A_HALMA RecName: Full=Type II DNA topoisomerase VI subunit A
gi|55230069|gb|AAV45488.1| type II DNA topoisomerase VI subunit A [Haloarcula marismortui ATCC
43049]
gi|445762019|gb|EMA13253.1| DNA topoisomerase VI subunit A [Haloarcula sinaiiensis ATCC 33800]
gi|445773922|gb|EMA24951.1| DNA topoisomerase VI subunit A [Haloarcula californiae ATCC 33799]
Length = 368
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 167/330 (50%), Gaps = 16/330 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
+P+R SN ++ + V D+ + R ++S K V + + Q + T
Sbjct: 39 IPTRTKSNIVFDEDEQVWVYGDRNSTRSAKTISGAEKILKAVYTIDFLSQQLEEDRSSTL 98
Query: 174 RDLFYT------DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIF-- 224
R+L+Y D F Q +S+ +++D+ + R ++ E G V+G L+
Sbjct: 99 RELYYLSESWDLDEAQFNTQDESNNLIEDLEIVSDVKREDFHMRPEESGAKVMGPLLLRE 158
Query: 225 -SDNGDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
++ GD I C +G GG IP N D + + +DA F+L VE RL E+ F + +
Sbjct: 159 QTNRGDREIHCQDDVGQGGYQIPNNPDTIEFLDNDAKFVLCVETGGMRDRLVENGFDDEY 218
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
++V GQP ATR ++++ EL LPV D DP+ +I GS ++ S
Sbjct: 219 DALVVHLGGQPARATRRLIKRLHDELDLPVTVFTDGDPWSYRIFGSVSYGSIKSAHLSEY 278
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ +++GIRP D+ +Y++P P+++ D+ + LE+ + + W E++ L +
Sbjct: 279 LATPEAQFIGIRPEDIVEYELPTD---PLSDSDVNALESELEDPRFQTD-FWEEQIELQL 334
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+KAE QAL+S G +++E YLP +L +
Sbjct: 335 DINKKAEQQALASRGLDFVTETYLPERLDE 364
>gi|345005806|ref|YP_004808659.1| Type 2 DNA topoisomerase 6 subunit A [halophilic archaeon DL31]
gi|344321432|gb|AEN06286.1| Type 2 DNA topoisomerase 6 subunit A [halophilic archaeon DL31]
Length = 366
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 171/358 (47%), Gaps = 16/358 (4%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
S A + + L + AG ++P+R SN Y PE V D+T+ R S
Sbjct: 8 SDEAAREQLIELAAEFYDQFAAGEIPHMELPTRTKSNIEYDPEKKVWVYGDRTSNRSANS 67
Query: 145 LSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFY------TDVKLFQDQTQSDAVLDDVA 198
+ RK + + + T R+L+Y + F Q +S+++++D+
Sbjct: 68 VGGARKLLKAAYTIEFLANQLDEDRSSTLRELYYLSESWDNEEAQFSGQDESNSLVEDLE 127
Query: 199 CILGCTRSSLNVIAAEKGV-VVGRLIFSDN---GDM-IDCTK-MGMGGKAIPPNIDRVGD 252
+ G TR L++ E G ++G L + G+ I C K +G GG IP N D +
Sbjct: 128 IVTGVTREDLHMRPEESGATLMGPLELREQTRRGEREIHCQKDVGEGGYQIPNNPDTIEF 187
Query: 253 MQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVL 312
+ + F++ VE RL E+ F + C++V KGQP ATR ++++ EL LPVL
Sbjct: 188 LDHEIDFVMCVETGGMRDRLIENGFDDEHNCLVVHLKGQPARATRRIIKRLHDELDLPVL 247
Query: 313 ALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTE 372
D DP+ +I GS ++ S L TP ++GIRP D+ Y +P P+ +
Sbjct: 248 VFCDGDPWSYRIYGSVAYGSIKSAHLSEYLATPGADYVGIRPQDIVDYDLPTD---PLAD 304
Query: 373 QDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
DI + L D + W E++ L + +KAE QAL+S G ++++ YLP +L+
Sbjct: 305 SDINALESEL-SDPRFQTEFWEEQIELQLDIGKKAEQQALASRGLDFVTDTYLPERLE 361
>gi|336254127|ref|YP_004597234.1| type 2 DNA topoisomerase 6 subunit A [Halopiger xanaduensis SH-6]
gi|335338116|gb|AEH37355.1| Type 2 DNA topoisomerase 6 subunit A [Halopiger xanaduensis SH-6]
Length = 363
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 169/328 (51%), Gaps = 16/328 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
VP+R +N Y + V D+ + R S+ RK V + + + + T
Sbjct: 34 VPTRTKNNIEYDEDEKVWVYGDRESTRSANSVRGARKLLKAVYTIEFLAEQLDEDRSSTL 93
Query: 174 RDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y + F Q +S+++++D+ + G TR ++ E G ++G L +
Sbjct: 94 RELYYLSESWDNEEAQFSSQDESNSLVEDLEIVSGVTREDFHMRPEESGATIMGPLHLRE 153
Query: 227 N---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
G+ I C K +G GG IP N D + + DA FIL VE RL E+ F + +
Sbjct: 154 QTRRGEREIHCQKDVGEGGYQIPNNPDTIDFLDCDADFILAVETGGMRDRLVENGFDDEY 213
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
+IV KGQP ATR +++ EL LPV D DP+ +I GS ++ S
Sbjct: 214 NALIVHLKGQPARATRRITKRLHDELDLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEY 273
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ +++GI+P+D+ +Y++P P+++ DI + LE+ + + W E++ L +
Sbjct: 274 LATPEAQFIGIQPADIVEYELPTD---PLSDSDINALESELEDPRFQTD-YWEEQIELQL 329
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKL 429
+ ++K+E Q+L+S G +++E YLP +L
Sbjct: 330 EIEKKSEQQSLASHGLDFVTETYLPERL 357
>gi|401398583|ref|XP_003880351.1| unnamed protein product [Neospora caninum Liverpool]
gi|325114761|emb|CBZ50317.1| unnamed protein product [Neospora caninum Liverpool]
Length = 340
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 151/300 (50%), Gaps = 20/300 (6%)
Query: 139 LRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVA 198
LR F V+K T + +L IH L + LFY V +F Q Q + L +
Sbjct: 58 LRKFG----VKKLTWVLSLLDQIHGLLM--------SLFYRLVNVFDTQAQVNVQLQQIV 105
Query: 199 CILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAM 258
L R LNV A++KG+V G L F +DC + G G I + V ++S A
Sbjct: 106 SWLEIPRDCLNVFASQKGLVAGMLTFLKGSLTLDCRRTGTG-VLISETLLEVDKIESHAS 164
Query: 259 FILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLA---LV 315
+I++VEKDA + L E + +N PCI++T KG PD ATR LR ++M L + +
Sbjct: 165 YIIVVEKDAVFQTLCEQQIWNIIPCILITGKGFPDFATRKLLRHLQMSLNIESFQCGYVG 224
Query: 316 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 375
D DP+G+ I Y GSK +++ + + W+G+ DL ++P RL + +D
Sbjct: 225 DFDPHGISIFLSYQYGSK--AFEGPLVRCAVLHWIGLCSEDLK--QLPLDVRLCLLNRDR 280
Query: 376 KTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
K LL ++ E+ M++ K EI+A++S GF YL+ Y+P K+ ++ W+
Sbjct: 281 ALLKSLLVHPKIRNCERLKEQCLFMMEHDTKFEIEAITSLGFDYLARYYIPSKILKRTWI 340
>gi|448678347|ref|ZP_21689354.1| DNA topoisomerase VI subunit A [Haloarcula argentinensis DSM 12282]
gi|445772334|gb|EMA23379.1| DNA topoisomerase VI subunit A [Haloarcula argentinensis DSM 12282]
Length = 368
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 166/330 (50%), Gaps = 16/330 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
+P+R SN ++ + V D+ + R ++S K V + + Q + T
Sbjct: 39 IPTRTKSNIVFDEDEQVWVYGDRNSTRSAKTISGAEKILKAVYTIDFLSQQLEEDRSSTL 98
Query: 174 RDLFYT------DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIF-- 224
R+L+Y D F Q +S+ +++D+ + R ++ E G V+G L+
Sbjct: 99 RELYYLSESWDLDEAQFNTQDESNNLIEDLEIVSDVKREDFHMRPEESGAKVMGPLLLRE 158
Query: 225 -SDNGDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
++ GD I C +G GG IP N D + + +DA F+L VE RL E+ F + +
Sbjct: 159 QTNRGDREIHCQDDVGQGGYQIPNNPDTIEFLDNDAKFVLCVETGGMRDRLVENGFDDEY 218
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
++V GQP ATR ++++ EL LPV D DP+ +I GS ++ S
Sbjct: 219 DALVVHLGGQPARATRRLIKRLHDELDLPVTVFTDGDPWSYRIFGSVSYGSIKSAHLSEY 278
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ +++GIRP D+ +Y++P P+ + D+ + LE+ + + W E++ L +
Sbjct: 279 LATPEAQFIGIRPEDIVEYELPTD---PLADSDVNALESELEDPRFQTD-FWEEQIELQL 334
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+KAE QAL+S G +++E YLP +L +
Sbjct: 335 DINKKAEQQALASRGLDFVTETYLPERLDE 364
>gi|435848696|ref|YP_007310946.1| DNA topoisomerase VI, subunit A [Natronococcus occultus SP4]
gi|433674964|gb|AGB39156.1| DNA topoisomerase VI, subunit A [Natronococcus occultus SP4]
Length = 363
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 169/328 (51%), Gaps = 16/328 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
VP+R SN Y E + V D+ + R S+ RK V + + ++ T
Sbjct: 34 VPTRTKSNIEYDEEKEVWVYGDRESTRSANSVRGARKLLKAVYTIEFLANQLEQDRSSTL 93
Query: 174 RDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y + F Q +S+ +++D+ + G TR ++ E G ++G L +
Sbjct: 94 RELYYLSESWDNEEAQFTSQDESNGLIEDLEIVSGVTREDFHMRPEESGATIMGPLYLRE 153
Query: 227 N---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
G+ I C + +G GG IP N D + + +DA FIL VE RL E+ F +
Sbjct: 154 QTRRGEREIHCQEDVGEGGYQIPNNPDTIEFLDTDADFILAVETGGMRDRLVENGFDEEY 213
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
+IV KGQP ATR +++ EL LPV D DP+ +I + GS ++ S
Sbjct: 214 NALIVHLKGQPARATRRITKRLHDELDLPVTVFADGDPWSYRIYASVAYGSIKSAHLSEY 273
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ +++GI+P+D+ +Y +P P+++ DI + L++ + + W E++ L +
Sbjct: 274 LATPEAQYIGIQPADIVEYDLPTD---PLSDSDINALESELDDPRFQTD-YWEEQIELQL 329
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKL 429
+ ++K+E Q+L+S G ++++ YLP +L
Sbjct: 330 EIEKKSEQQSLASRGLDFVTDTYLPERL 357
>gi|158287917|ref|XP_309793.4| AGAP010898-PA [Anopheles gambiae str. PEST]
gi|157019418|gb|EAA05541.4| AGAP010898-PA [Anopheles gambiae str. PEST]
Length = 279
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 158/282 (56%), Gaps = 10/282 (3%)
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIA 212
+ V++L+ I+QL TKR+L+Y ++L Q + A L+DV +L L+V
Sbjct: 1 LMVQLLATIYQLLTTGSSCTKRELYYLHLELAQTPAYTYATLEDVCALLDADPWELHVYN 60
Query: 213 AEKGVVVGRLIFS-DNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIR 271
KG++ G ++ + +G IDC G G A+P ++ V +++ A +L+VEKD + R
Sbjct: 61 TSKGLIAGPIVLTLSDGQRIDCN--GRWGTAVPLDVGSVTEIRLAAKLVLVVEKDTVFKR 118
Query: 272 LAEDRFYNRFP--CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYG 329
L ED + FP +++TAKG PDV+TRL L+K+ +P+ L+D+DP+G++I VY
Sbjct: 119 LLEDGILSTFPDTLVLITAKGYPDVSTRLLLKKISDWTHVPIYGLMDADPHGIEIFCVYK 178
Query: 330 CGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKK 389
GS M + +L P ++W+G+ PSD++ + +P+ E ++K + + + + +
Sbjct: 179 FGSLAMVHQQRSLAVPTMRWIGLFPSDIELLGLQ---GVPLREGELKRIEQMTKRPYTEG 235
Query: 390 NPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+ L + T K EI++L + +++ VYL KL++
Sbjct: 236 HIQRELLLLRQLAT--KVEIESLYNIASDFITTVYLKGKLKE 275
>gi|118575978|ref|YP_875721.1| DNA topoisomerase VI, subunit A [Cenarchaeum symbiosum A]
gi|118194499|gb|ABK77417.1| DNA topoisomerase VI, subunit A [Cenarchaeum symbiosum A]
Length = 306
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 157/311 (50%), Gaps = 22/311 (7%)
Query: 132 VLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKL---FQDQT 188
+L +LR + S +R T + + ++L T RD++Y+ F+DQ+
Sbjct: 1 MLGPNASLRSTRNTSQLRSYTQLMWLAFFANRLTREKKSSTLRDVYYSSQAFAVDFEDQS 60
Query: 189 QSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMG----GKAIP 244
+SD+++ D+ +L R +V E+ V G L + +M + G AI
Sbjct: 61 ESDSIIVDLEAVLAKPREDFHVFPEERSSVFGDLDIEYTVPGYEGKRMNLSNHPDGYAIG 120
Query: 245 PNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMK 304
P++ + + A ++ +EK + R E++ +F IIV GQ +TR L+++
Sbjct: 121 PSLTSAELVSTSAEIVIAIEKGGLFTRFVEEQVDKKFKSIIVDTGGQAPRSTRTLLKRLN 180
Query: 305 MELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPE 364
EL LPV+ L D D YG I V GS ++ LT PD KW+G+ +D++KYK+P
Sbjct: 181 SELGLPVVILTDGDVYGEHIAMVIKSGSAGAAH-LRELTVPDAKWVGVWATDIEKYKLPT 239
Query: 365 QCRLPMTEQDIKTGKDLLEEDFVKKNPG-----WVEELNLMVKTKQKAEIQALSSFGFQY 419
+PMTE DIK DL K++P W +EL ++ K+KAE++A S +G
Sbjct: 240 ---IPMTESDIKRCHDL------KRDPRYQEGIWRKELEAFLRIKRKAELEAFSKYGLTN 290
Query: 420 LSEVYLPLKLQ 430
+++ YLP KL+
Sbjct: 291 ITDKYLPQKLE 301
>gi|257388767|ref|YP_003178540.1| DNA topoisomerase [Halomicrobium mukohataei DSM 12286]
gi|257171074|gb|ACV48833.1| DNA topoisomerase (ATP-hydrolyzing) [Halomicrobium mukohataei DSM
12286]
Length = 366
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 169/337 (50%), Gaps = 16/337 (4%)
Query: 107 GNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCL 166
G+ + Q+P+R SN Y + D V D+++ R ++S +K + + Q
Sbjct: 30 GDVPTMQIPTRTKSNIEYDEDKDVWVYGDRSSTRSAKTVSGAQKLLKATYTIDFLAQQLE 89
Query: 167 RNIHVTKRDLFYT------DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VV 219
+ T R+L+Y D F Q +S+ +++D+ + R ++ E G V+
Sbjct: 90 EDRSSTLRELYYLSESWDLDEAQFNTQDESNNLIEDLEIVSEVKREDFHMRPEESGAKVM 149
Query: 220 GRLIFSDN---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAE 274
G L+ + GD I C +G GG IP N D + + +DA F+L VE RL E
Sbjct: 150 GPLLLREQTRRGDREIHCQDDVGQGGYQIPNNPDTIEFLDNDADFVLCVETGGMRDRLVE 209
Query: 275 DRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKN 334
+ F + + I+V GQP ATR +++ EL LPV+ D DP+ +I GS
Sbjct: 210 NGFDDEYDSIVVHLGGQPARATRRLTKRLHDELDLPVVVFTDGDPWSYRIYGSVAYGSIK 269
Query: 335 MSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWV 394
++ S L TP+ +++GIRP D+ +Y +P P+++ DI + L ED + W
Sbjct: 270 SAHLSEYLATPEAQFIGIRPEDIVEYDLPTD---PLSDSDINALESEL-EDPRFQTEFWE 325
Query: 395 EELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
E++ L + +K+E QAL+S G ++++ YLP +L +
Sbjct: 326 EQIELQLDIGKKSEQQALASRGLDFVTDTYLPERLTE 362
>gi|448688770|ref|ZP_21694507.1| DNA topoisomerase VI subunit A [Haloarcula japonica DSM 6131]
gi|445778640|gb|EMA29582.1| DNA topoisomerase VI subunit A [Haloarcula japonica DSM 6131]
Length = 368
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 166/330 (50%), Gaps = 16/330 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
+P+R SN ++ + V D+ + R ++S K V + + Q + T
Sbjct: 39 IPTRTKSNIVFDEDEQVWVYGDRNSTRSAKTVSGAEKILKAVYTIDFLSQQLEEDRSSTL 98
Query: 174 RDLFYT------DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIF-- 224
R+L+Y D F Q +S+ +++D+ + R ++ E G V+G L+
Sbjct: 99 RELYYLSESWDLDEAQFNTQDESNNLIEDLEIVSDVKREDFHMRPEESGAKVMGPLLLRE 158
Query: 225 -SDNGDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
++ GD I C +G GG IP N D + + +DA F+L VE RL E+ F + +
Sbjct: 159 QTNRGDREIHCQDDVGQGGYQIPNNPDTIEFLDNDAKFVLCVETGGMRDRLVENGFDDEY 218
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
++V GQP ATR ++++ EL LPV D DP+ +I GS ++ S
Sbjct: 219 DALVVHLGGQPARATRRLIKRLHDELDLPVTVFTDGDPWSYRIFGSVSYGSIKSAHLSEY 278
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ +++GIRP D+ +Y++P P+ + D+ + LE+ + + W E++ L +
Sbjct: 279 LATPEAQFIGIRPEDIVEYELPTD---PLADSDVNALESELEDPRFQTD-FWEEQIELQL 334
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+KAE QAL+S G +++E YLP +L +
Sbjct: 335 DINKKAEQQALASRGLDFVTETYLPERLDE 364
>gi|209945742|gb|ACI97102.1| meiotic W68 [Drosophila yakuba]
Length = 319
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 176/327 (53%), Gaps = 21/327 (6%)
Query: 92 TIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKS 151
+IE + L++ +++ GN + +VP ++ N + E R+ + + F L
Sbjct: 7 SIERIALELLSNLVQGNA-TLRVPRNSAGNM--ITEYRRVSYNNHGSRHSFCLL------ 57
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ +LS +H+L +R T R L+Y + L + Q++ DV +L + L ++
Sbjct: 58 ---IYMLSRVHRLQVRGGSFTVRGLYYDNPLLIRSQSRIAEARLDVCRMLSTSPLRLGIL 114
Query: 212 AAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYI 270
AA KG+V G L + NGD++D + G G +P + +++ +++ A F+L+VEK++ +
Sbjct: 115 AASKGLVAGDLRLLMTNGDVLDSSLYG-GPMTLPTDPEKIDRIETQAEFVLIVEKESVFE 173
Query: 271 RLAEDRFYNRFP--CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVY 328
L + F I++T KG PD TR + ++ ME +L LVD+DP+G++I+ VY
Sbjct: 174 SLLSRNVFGTFKRRFILITGKGYPDCCTRRIVHRLTMENQLSAYILVDADPFGVEIMLVY 233
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVK 388
GS++MS+ S LTTP ++W+G+ PS++ + + D K DLL + ++
Sbjct: 234 RHGSQSMSFSSQGLTTPALRWIGLHPSEIPALG---TVAVALVAGDNKKINDLLARNDLE 290
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSF 415
PG +EL ++ + KAEI+++ F
Sbjct: 291 --PGVRQELRMLQDVQLKAEIESVVDF 315
>gi|448727753|ref|ZP_21710102.1| DNA topoisomerase VI subunit A [Halococcus morrhuae DSM 1307]
gi|445789739|gb|EMA40418.1| DNA topoisomerase VI subunit A [Halococcus morrhuae DSM 1307]
Length = 366
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 168/338 (49%), Gaps = 16/338 (4%)
Query: 106 AGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLC 165
AG ++P+R SN Y D V D+T+ R S+ RK + + +
Sbjct: 29 AGQIPEMELPTRTKSNIEYDENSDVWVYGDRTSTRSANSVRGARKLLKAIYTIDFLADQL 88
Query: 166 LRNIHVTKRDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-V 218
+ T R+L+Y + F DQ +S+ +++D+ + TR ++ E G +
Sbjct: 89 GEDRSSTLRELYYLSESWDNEEAQFSDQDESNQLVEDLEIVSEVTREDFHMRPEESGATL 148
Query: 219 VGRLIFSDN---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
+G L + G+ I C K +G GG IP N D + + DA FIL VE RL
Sbjct: 149 MGPLYLREQTRRGEREIHCQKDVGEGGYQIPNNPDTIEFLDHDAEFILCVETGGMRDRLV 208
Query: 274 EDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSK 333
E+ F + + I+V KGQP ATR +++ EL LPV+ D DP+ +I GS
Sbjct: 209 ENGFDDDYGTIVVHLKGQPARATRRITKRLHNELDLPVVVFTDGDPWSYRIYGSVAYGSI 268
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
++ S L TP+ K++GI+P+D+ +Y +P P+ + DI + L + + + W
Sbjct: 269 KSAHLSDYLATPEAKFVGIQPTDIVEYDLPTD---PLADSDINALESELSDPRFQTDY-W 324
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
E++ L + +KAE QAL+S G ++++ YLP +L +
Sbjct: 325 REQIELQLDIGKKAEQQALASRGLDFVTDTYLPERLTE 362
>gi|84784010|gb|ABC61970.1| SPO11-like protein [Trichomonas vaginalis]
Length = 384
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 162/284 (57%), Gaps = 11/284 (3%)
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIA 212
+ +++L++I+ ++KR ++Y + LF Q + ++ + L R++L VI+
Sbjct: 111 VFLRVLAVIYHSLQNGEVISKRSIYYREPSLFGSQESVNQAIESICRSLEVNRTALGVIS 170
Query: 213 AEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIR 271
K V G L + D +G++ID + IP +D++ + ++A+ ++++EK++ ++R
Sbjct: 171 CPKSFVAGPLKWEDASGNIIDVST---HIAPIPALVDQIIKVSTNAIAVMVIEKESIFMR 227
Query: 272 LAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCG 331
L + + I++T +G PD TR F+R + L +P++ L D D YG+ I+ ++ G
Sbjct: 228 LVQSKIVTE--VILITPRGVPDYNTRYFVRLLDDSLSIPIVGLFDGDAYGIFIMHLFKYG 285
Query: 332 SKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNP 391
S + + D + P + WLGIRPSDL+ E L +T+++ K +++L D + +
Sbjct: 286 SMSAAQDGHAMACPHMMWLGIRPSDLNFLSSNEM--LTITDKEEKILRNILTFDHLSEE- 342
Query: 392 GWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
W +E+ L+++TK+KAEI+AL + YL ++YLP K DW+
Sbjct: 343 -WKKEIKLILETKRKAEIEALCN-STNYLIDLYLPQKFANHDWI 384
>gi|383139990|gb|AFG51276.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
Length = 75
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/74 (93%), Positives = 74/74 (100%)
Query: 362 IPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLS 421
IPEQCRLPMT+QDIKTGKDLLEEDFVKK+PGWV+ELNLMVKTKQKAEIQALSSFGFQYLS
Sbjct: 2 IPEQCRLPMTDQDIKTGKDLLEEDFVKKSPGWVDELNLMVKTKQKAEIQALSSFGFQYLS 61
Query: 422 EVYLPLKLQQKDWL 435
EVYLPLKLQQ+DW+
Sbjct: 62 EVYLPLKLQQRDWI 75
>gi|448361959|ref|ZP_21550572.1| DNA topoisomerase VI subunit A [Natrialba asiatica DSM 12278]
gi|445649639|gb|ELZ02576.1| DNA topoisomerase VI subunit A [Natrialba asiatica DSM 12278]
Length = 363
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 164/328 (50%), Gaps = 16/328 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
VP+R +N Y + D V D+ + R S+ RK V + + + T
Sbjct: 34 VPTRTKNNIEYDEDKDVWVYGDRESTRSANSVRGARKLLKAVYTIEFLTDQLEEDRSSTL 93
Query: 174 RDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y D F Q +S+++++D+ + G TR ++ E G V+G L +
Sbjct: 94 RELYYLSESWDNDNAQFTSQDESNSLVEDLEIVSGVTREDFHMRPEESGAKVMGPLHIRE 153
Query: 227 N---GDM-IDCT-KMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
GD I C +G GG IP N D + + +DA F+L VE RL E+ F +
Sbjct: 154 QTKRGDRDIHCQLDVGQGGYQIPNNPDMIEFLDNDAEFVLCVETGGMRDRLVENGFDEEY 213
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
I+V GQP ATR ++ EL LPV+ D DP+ +I GS ++ S
Sbjct: 214 DAIVVHLGGQPARATRRLTKRFHDELGLPVVVFTDGDPWSYRIYGSVAYGSIKSAHLSEY 273
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ ++GI+P+D+ +Y +P P+++ DI + LE+ + + W E++ L +
Sbjct: 274 LATPEADYIGIQPADIVEYDLPTD---PLSDSDINALESELEDPRFQTDY-WEEQIELQL 329
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKL 429
+ +K+E Q+L+S G ++++ YLP +L
Sbjct: 330 EIGKKSEQQSLASHGLDFVTDTYLPERL 357
>gi|194881359|ref|XP_001974815.1| GG21975 [Drosophila erecta]
gi|190658002|gb|EDV55215.1| GG21975 [Drosophila erecta]
Length = 331
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 184/347 (53%), Gaps = 25/347 (7%)
Query: 92 TIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKS 151
+IE + L + +++ GN +VP S N + E R+ ++ + F L
Sbjct: 7 SIEMIALDLLSNLVHGNA-HLRVPRNLSGNM--ISEYRRVSYNNRGSRHSFCLL------ 57
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ +LS +H+L + T R L+Y + L + Q++ DV +L + SL ++
Sbjct: 58 ---IYMLSRVHRLQVHGGSFTVRGLYYDNPLLIRSQSRIAEARLDVCRMLNTSPLSLGIL 114
Query: 212 AAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYI 270
AA KG+V G L + NGD++D + G G +P + +++ +++ A F+L+VEK++ +
Sbjct: 115 AASKGLVAGDLRLLMTNGDVLDSSLYG-GPLTLPTDPEKIDRIETQAEFLLIVEKESVFE 173
Query: 271 RLAEDRFYNRFP--CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVY 328
L + F I++T KG PD +TR + ++ E +L LVD+DP+G++I+ VY
Sbjct: 174 SLLSRNVFGTFKRRFILITGKGYPDCSTRRIVHRLAEENQLAAYILVDADPFGVEIMLVY 233
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVK 388
GS++MS+ S LTTP ++W+G+ PS++ + + D K DLL ++
Sbjct: 234 RHGSQSMSFSSQGLTTPALRWIGLHPSEIPALGTGA---VALVAGDNKKINDLLARHDLE 290
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
PG +EL ++ + KAEI+++ F L++ Y+P K+ + +L
Sbjct: 291 --PGVRQELRMLQDVQLKAEIESVIDF----LTDDYIPNKINRNLFL 331
>gi|448348507|ref|ZP_21537356.1| DNA topoisomerase VI subunit A [Natrialba taiwanensis DSM 12281]
gi|448369502|ref|ZP_21556054.1| DNA topoisomerase VI subunit A [Natrialba aegyptia DSM 13077]
gi|445642874|gb|ELY95936.1| DNA topoisomerase VI subunit A [Natrialba taiwanensis DSM 12281]
gi|445650677|gb|ELZ03593.1| DNA topoisomerase VI subunit A [Natrialba aegyptia DSM 13077]
Length = 363
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 164/328 (50%), Gaps = 16/328 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
VP+R +N Y + D V D+ + R S+ RK V + + + T
Sbjct: 34 VPTRTKNNIEYDEDKDVWVYGDRESTRSANSVRGARKLLKAVYTIEFLADQLEEDRSSTL 93
Query: 174 RDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y D F Q +S+++++D+ + G TR ++ E G V+G L +
Sbjct: 94 RELYYLSESWDNDNAQFTSQDESNSLVEDLEIVSGVTREDFHMRPEESGAKVMGPLHIRE 153
Query: 227 N---GDM-IDCT-KMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
GD I C +G GG IP N D + + +DA F+L VE RL E+ F +
Sbjct: 154 QTKRGDRDIHCQLDVGQGGYQIPNNPDMIEFLDNDADFVLCVETGGMRDRLVENGFDEEY 213
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
I+V GQP ATR ++ EL LPV+ D DP+ +I GS ++ S
Sbjct: 214 DAIVVHLGGQPARATRRLTKRFHDELGLPVVVFTDGDPWSYRIYGSVAYGSIKSAHLSEY 273
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ ++GI+P+D+ +Y +P P+++ DI + LE+ + + W E++ L +
Sbjct: 274 LATPEADYIGIQPADIVEYDLPTD---PLSDSDINALESELEDPRFQTDY-WEEQIELQL 329
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKL 429
+ +K+E Q+L+S G ++++ YLP +L
Sbjct: 330 EIGKKSEQQSLASHGLDFVTDTYLPERL 357
>gi|170092549|ref|XP_001877496.1| topoisomerase acting in meiosis [Laccaria bicolor S238N-H82]
gi|164647355|gb|EDR11599.1| topoisomerase acting in meiosis [Laccaria bicolor S238N-H82]
Length = 315
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 151/290 (52%), Gaps = 33/290 (11%)
Query: 140 RPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVAC 199
RP A L +++L L H+ L + TKRD+FY DV LF+ Q D ++DD+A
Sbjct: 42 RPLAQL---------MRLLDLTHEAILDGLPATKRDIFYKDVALFKTQKVVDNLVDDLAA 92
Query: 200 ILGCTRSSLNVIAAEKGVVVG-----RLIFSDNGDMIDCTKMGMGGKAIPPNID-RVGDM 253
RS LN+ A+ KG++ G +L+ + +ID G IP D +
Sbjct: 93 TFQIERSDLNIRASTKGLISGAGLTIQLLSGEVIQLIDTE-----GSIIPAGEDIESFSV 147
Query: 254 QSDAMFILLVEKDAAYIRL-------AEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKME 306
D ++L+VEK+A + L + Y+R + KG PDVATR ++ +
Sbjct: 148 DEDVAWVLIVEKEAVFQTLCRLGITDVDSIVYSR----LFQGKGYPDVATRHLVKSLADA 203
Query: 307 L--KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPE 364
L +P++ALVD DPYGL ILSVY GS +M ++S L T IKWLGI S+L+ I
Sbjct: 204 LPRTIPIMALVDGDPYGLDILSVYKYGSLSMQHESGKLATKRIKWLGIWASELETLGIDR 263
Query: 365 QCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSS 414
LP+++ D K +L + W +EL M+ +++KAEI+ LS+
Sbjct: 264 DNLLPISKHDEKKALSMLLRPTSQLPEKWKKELVHMLHSRRKAEIEILSN 313
>gi|156082001|ref|XP_001608493.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148801064|gb|EDL42469.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 334
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 157/281 (55%), Gaps = 5/281 (1%)
Query: 154 TVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAA 213
TV ++ L++ + +++ T+R+++Y LF +Q Q++ + V ILG R+SLNV A+
Sbjct: 57 TVSVVELVNDMVIQDKSCTQREIYYKLYHLFSEQCQTNRHILHVCHILGFPRASLNVYAS 116
Query: 214 EKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
EKG + G L+ N + ++ ++ G I ++ +V ++S A +IL+VEK + Y +L
Sbjct: 117 EKGCIGGLLVLRKNNERLNLNEVE-NGLMINDSLLKVDRVESQANYILVVEKYSLYQKLC 175
Query: 274 EDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSK 333
E +N PCI++T KG PD +TR + ++ +L + + D DPYG +I Y G K
Sbjct: 176 EKEIWNILPCILITGKGVPDFSTRKIICELVELFQLECVYVGDYDPYGFRIYLSYKEGCK 235
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
+ + A D++W+G+ D+ IP++ L ++++D +++L D +K +
Sbjct: 236 --TNEDAIFPCADMRWVGMNSQDMS--LIPKEALLALSQRDKNVLRNMLSGDSLKCSAKV 291
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDW 434
E+ M K +K EI+A+ S G + YL ++ +++W
Sbjct: 292 RREITQMEKLSRKFEIEAMESLGMDFFIREYLIRRVMRREW 332
>gi|389582748|dbj|GAB65485.1| topoisomerase [Plasmodium cynomolgi strain B]
Length = 334
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 158/281 (56%), Gaps = 5/281 (1%)
Query: 154 TVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAA 213
TV ++ L++ + +++ T+R+++Y LF +Q Q++ + V ILG R+SLNV A+
Sbjct: 57 TVSVVQLVNDMVIQDKSCTQREIYYKLYNLFSEQCQTNRHILHVCHILGFPRASLNVYAS 116
Query: 214 EKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
EKG + G L+ + ++ ++ G I ++ +V ++S A +IL+VEK + Y +L
Sbjct: 117 EKGCIGGLLVLRKKNERLNLNELE-NGLMINDSLLKVDRVESQANYILVVEKYSLYQKLC 175
Query: 274 EDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSK 333
E +N PCI++T KG PD +TR + ++ +L + + D DPYG +I Y G K
Sbjct: 176 EKEIWNILPCILITGKGVPDFSTRKIICELVELFQLECVYVGDYDPYGFRIYLSYKEGCK 235
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
+ + A D++W+G+ D+D IP++ L ++++D +++L D ++ +
Sbjct: 236 --TNEDAIFACTDMRWVGMNSQDMD--LIPKEALLELSKRDKNVLRNMLNGDRLRCSAKV 291
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDW 434
+E+ M K +K EI+A+ S G + YL ++ +++W
Sbjct: 292 RKEITQMEKLSRKFEIEAMESLGMDFFIRQYLIRRVMRREW 332
>gi|76802378|ref|YP_327386.1| DNA topoisomerase VI subunit A [Natronomonas pharaonis DSM 2160]
gi|121695453|sp|Q3IPW7.1|TOP6A_NATPD RecName: Full=Type 2 DNA topoisomerase 6 subunit A; AltName:
Full=Type II DNA topoisomerase VI subunit A
gi|76558243|emb|CAI49831.1| DNA topoisomerase VI subunit A [Natronomonas pharaonis DSM 2160]
Length = 368
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 171/333 (51%), Gaps = 16/333 (4%)
Query: 111 SFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIH 170
+ ++P+R SN ++ + D V D+T+ R S+ +K + + + +
Sbjct: 36 TMEIPTRTKSNIVFDEDKDVWVYGDRTSTRSANSVRGAQKLLKAIYTIEFLADQLEQGRS 95
Query: 171 VTKRDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLI 223
T R+L+Y + F DQ +S+ +++D+ + TR ++ E G ++G L
Sbjct: 96 STLRELYYLSESWDEERAQFNDQDESNQLVEDLEIVSKVTREDFHMRPEESGATIMGPLY 155
Query: 224 FSDN---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFY 278
+ G+ I C K +G GG IP N D + + +DA F+L VE RL E+ F
Sbjct: 156 LREQTRRGEREIHCQKDVGEGGYQIPNNPDTIEFLDNDADFVLCVETGGMRDRLVENGFD 215
Query: 279 NRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYD 338
IIV KGQP ATR +++ +L LPV+ D DP+ +I + GS ++
Sbjct: 216 EEHNVIIVHLKGQPARATRRITKRLHDDLDLPVVVFCDGDPWSYRIYASVAYGSIKSAHL 275
Query: 339 SANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELN 398
S L TP+ +++GI+P+D+ +Y +P P+++ DI + L +D ++ W E++
Sbjct: 276 SEYLATPEAEYIGIQPADIVEYDLPTD---PLSDSDINALESEL-DDPRFQDDYWREQIE 331
Query: 399 LMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
L + +KAE QAL+S G +++E YLP +L +
Sbjct: 332 LQLDIGKKAEQQALASRGLDFVTETYLPERLGE 364
>gi|448739099|ref|ZP_21721117.1| DNA topoisomerase VI subunit A [Halococcus thailandensis JCM 13552]
gi|445800248|gb|EMA50606.1| DNA topoisomerase VI subunit A [Halococcus thailandensis JCM 13552]
Length = 366
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 169/338 (50%), Gaps = 16/338 (4%)
Query: 106 AGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLC 165
AG ++P+R SN Y D V D+T+ R S+ RK + + +
Sbjct: 29 AGQIPEMELPTRTKSNIEYDENSDVWVYGDRTSTRSANSVRGARKLLKAIYTIDFLADQL 88
Query: 166 LRNIHVTKRDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-V 218
+ T R+L+Y + F DQ +S+ +++D+ + TR ++ E G +
Sbjct: 89 GEDRSSTLRELYYLSESWDNEEAQFSDQDESNQLVEDLEIVSEVTREDFHMRPEESGATL 148
Query: 219 VGRLIFSDN---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
+G L + G+ I C K +G GG IP N D + + DA FIL VE RL
Sbjct: 149 MGPLHLREQTRRGEREIHCQKDVGEGGYQIPNNPDTIEFLDHDAEFILCVETGGMRDRLV 208
Query: 274 EDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSK 333
E+ F + + I+V KGQP ATR +++ EL LPV+ D DP+ +I GS
Sbjct: 209 ENGFDDDYGTIVVHLKGQPARATRRITKRLHDELDLPVVVFTDGDPWSYRIYGSVAYGSI 268
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
++ S L TP+ +++GI+P+D+ +Y +P P+ + DI + L + + + W
Sbjct: 269 KSAHLSDYLATPEAQFVGIQPTDIVEYDLPTD---PLADSDINALESELSDPRFQTDY-W 324
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
E++ L + ++KAE QAL+S G ++++ YLP +L +
Sbjct: 325 REQIELQLDIEKKAEQQALASRGLDFVTDTYLPERLTE 362
>gi|380015951|ref|XP_003691957.1| PREDICTED: meiotic recombination protein SPO11-like [Apis florea]
Length = 404
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 164/298 (55%), Gaps = 20/298 (6%)
Query: 142 FASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVK------LFQDQTQSDAVLD 195
FAS K + + +++ H+L + N +T+R L+Y D+K L +Q D +
Sbjct: 103 FASKRGKDKFALMMTVMATAHRLLITNTTLTRRSLYY-DLKNERTSNLVPEQRCLDQAVH 161
Query: 196 DVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGD-MIDCTKMGMGGKAIPPNI--DRVGD 252
VA +L C LN++ KG+V G L + D +IDCT + G A+ P++ + V
Sbjct: 162 HVANLLNCAPWELNLLPTSKGLVAGELTLALADDRIIDCT---VPGGALIPHLASNYVIS 218
Query: 253 MQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVL 312
+S A +L+VEKDA + +L ED + CI++T KG PDVATR+ ++ + +L+LPV
Sbjct: 219 ARSRAKLVLIVEKDAVFQKLLEDDCTSSLNCILITGKGYPDVATRMLVKLLSEKLELPVY 278
Query: 313 ALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTE 372
+VD+DP+G+ I+ VY GS +S + L +++WLGI PS+L + P+TE
Sbjct: 279 IIVDADPFGVDIMCVYRFGSAALSRERETLACSNVRWLGIHPSELLALGVNTA---PLTE 335
Query: 373 QDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
D+ L ++ ++ E+ +M + KAEI+ +SS ++L YLP K++
Sbjct: 336 FDLSKLTALEGRPYLTG--AFLREVGVMRRLG-KAEIENVSS-SRKFLVSTYLPCKIK 389
>gi|209945750|gb|ACI97106.1| meiotic W68 [Drosophila simulans]
Length = 319
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 174/327 (53%), Gaps = 21/327 (6%)
Query: 92 TIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKS 151
IE + L++ +++ GN + VP +S N + E R+ ++ + F L
Sbjct: 7 NIERIALELLSNLVHGNA-TLSVPRNSSGN--VISEYRRVSYNNRGSRHSFCVL------ 57
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ +LS +H+L +R T R L+Y + L + Q++ DV +L + SL ++
Sbjct: 58 ---IYMLSRVHRLQVRGGSFTVRGLYYDNPLLVRSQSRIAEARLDVCRMLSTSPLSLGIL 114
Query: 212 AAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYI 270
AA KG+V G L + NGD++D + G G +P + +++ +++ A F+L+VEK++ +
Sbjct: 115 AASKGLVAGDLRLLMTNGDVLDSSLYG-GPLTLPTDPEKIDRIETQAEFVLIVEKESVFE 173
Query: 271 RLAEDRFYNRFP--CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVY 328
L + F I++T KG PD TR + ++ E +L LVD+DP+G++I+ VY
Sbjct: 174 SLLSRNVFGTFKRRFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVY 233
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVK 388
GS++MS+ S LTTP ++W+G+ PS++ + + D K DLL ++
Sbjct: 234 RHGSQSMSFSSQELTTPALRWIGLHPSEIPALGTGA---VALVAGDNKKINDLLARHNLE 290
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSF 415
PG +EL ++ + KAEI+++ F
Sbjct: 291 --PGVRQELRMLQDVQLKAEIESVIDF 315
>gi|448627572|ref|ZP_21672038.1| DNA topoisomerase VI subunit A [Haloarcula vallismortis ATCC 29715]
gi|445758880|gb|EMA10176.1| DNA topoisomerase VI subunit A [Haloarcula vallismortis ATCC 29715]
Length = 368
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 166/330 (50%), Gaps = 16/330 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
+P+R SN ++ + V D+ + R ++S K V + + Q + T
Sbjct: 39 IPTRTKSNIVFDEDEQVWVYGDRDSTRSAKTISGAEKILKAVYTIDFLSQQLEEDRSSTL 98
Query: 174 RDLFYT------DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIF-- 224
R+L+Y D F Q +S+ +++D+ + R ++ E G V+G L+
Sbjct: 99 RELYYLSESWDLDEAQFNTQDESNNLIEDLEIVSDVKREDFHMRPEESGAKVMGPLLLRE 158
Query: 225 -SDNGDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
++ GD I C +G GG IP N D + + +DA F+L VE RL E+ F + +
Sbjct: 159 QTNRGDREIHCQDDVGQGGYQIPNNPDTIEFLDNDAKFVLCVETGGMRDRLVENGFDDEY 218
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
++V GQP ATR ++++ EL LPV D DP+ +I GS ++ S
Sbjct: 219 DALVVHLGGQPARATRRLIKRLHDELDLPVTVFTDGDPWSYRIFGSVSYGSIKSAHLSEY 278
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ +++GIRP D+ +Y++P P+ + D+ + LE+ + + W E++ L +
Sbjct: 279 LATPEAQFIGIRPEDIVEYELPTD---PLADSDVNALESELEDPRFQTD-FWEEQIELQL 334
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+KAE QAL+S G ++++ YLP +L +
Sbjct: 335 DINKKAEQQALASRGLDFVTDTYLPERLDE 364
>gi|448302924|ref|ZP_21492874.1| DNA topoisomerase VI subunit A [Natronorubrum sulfidifaciens JCM
14089]
gi|445593931|gb|ELY48098.1| DNA topoisomerase VI subunit A [Natronorubrum sulfidifaciens JCM
14089]
Length = 363
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 167/330 (50%), Gaps = 16/330 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
VP+R +N Y + V D+ + R S+ RK V + + + T
Sbjct: 34 VPTRTKNNIEYDEDKGVWVYGDRESTRSANSVRGARKLLKAVYTIEFLANQLEEDRSSTL 93
Query: 174 RDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y + F DQ +S+ +++D+ + G TR ++ E G ++G L +
Sbjct: 94 RELYYLSESWDNNEAQFSDQDESNGLIEDLEIVSGVTREDFHMRPEESGATIMGPLHLRE 153
Query: 227 N---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
G+ I C + +G GG IP N D + + DA FIL VE RL E+ F + +
Sbjct: 154 QTRRGERDIHCQEDVGEGGYQIPNNPDTIEFLDCDADFILAVETGGMRDRLVENGFDDEY 213
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
+IV KGQP ATR ++++ EL LPV D DP+ +I GS ++ S
Sbjct: 214 NALIVHLKGQPARATRRIIKRLHDELDLPVTVFADGDPWSYRIYGSVAYGSIKSAHLSEY 273
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP +++GI+P+D+ +Y +P P+++ DI + LE+ + + W E++ L +
Sbjct: 274 LATPAAQYIGIQPADIVEYDLPTD---PLSDSDINALESELEDPRFQTDY-WEEQIELQL 329
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+ +K+E Q+L++ G +++E YLP +L +
Sbjct: 330 EIGKKSEQQSLAARGLDFVTETYLPERLSE 359
>gi|116753913|ref|YP_843031.1| DNA topoisomerase VI subunit A [Methanosaeta thermophila PT]
gi|116665364|gb|ABK14391.1| Spo11/DNA topoisomerase VI, subunit A-like protein [Methanosaeta
thermophila PT]
Length = 357
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 179/354 (50%), Gaps = 21/354 (5%)
Query: 94 ETLILQIARSIL----AGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVR 149
E+ +L IARS+ G +P+R N Y + D V D+ ++R ++ +
Sbjct: 5 ESRLLSIARSLYDQFREGTVPHLVLPTRTKKNIEYSTKDDVWVYGDQESVRSVKTIRGAK 64
Query: 150 KSTITVKILSLIHQLCLR-NIHVTKRDLFYT----DVKLFQDQTQSDAVLDDVACILGCT 204
TV ++ L+ + LR N T R+++Y D+ F +Q +SD +++D+ I G
Sbjct: 65 TLLKTVHLVDLLVKEHLRGNRASTLREIYYISENWDLAKFAEQAESDRLIEDLEIITGLQ 124
Query: 205 RSSLNVIAAEKGVVV-GRLIFSDNGDMI----DCTK-MGMGGKAIPPNIDRVGDMQSDAM 258
R +V E G V G L + C + +G G IP N+D V ++ DA
Sbjct: 125 REEFHVRPEEDGAAVFGPLRIRERTRRGEREIHCQEDIGEAGYQIPFNVDFVEFLEHDAR 184
Query: 259 FILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSD 318
++ VE Y RL E+ F F I+V KGQP +TR F++++ EL LPV D D
Sbjct: 185 MVIAVETGGMYARLIENGFDEEFDAILVHLKGQPARSTRRFIKRLNTELGLPVAVFTDGD 244
Query: 319 PYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTG 378
P+ +I + G+ ++ S +L TPD ++LG++P+D+ +Y + +T++D+
Sbjct: 245 PWSYRIFASVAYGAIKSAHLSEHLATPDARFLGVQPTDIVEYNLSTD---KLTDRDLHAL 301
Query: 379 K-DLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+ +L + F + W ++ L + K+KAE QA + G ++++ YLP +L +
Sbjct: 302 RAELTDPRF--GSDYWQMQIQLQIDLKKKAEQQAFAGKGLDFVTKRYLPERLSE 353
>gi|361068647|gb|AEW08635.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383139982|gb|AFG51272.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383139984|gb|AFG51273.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383139986|gb|AFG51274.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383139988|gb|AFG51275.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383139992|gb|AFG51277.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383139994|gb|AFG51278.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383139996|gb|AFG51279.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383139998|gb|AFG51280.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383140000|gb|AFG51281.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383140002|gb|AFG51282.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383140004|gb|AFG51283.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383140006|gb|AFG51284.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383140008|gb|AFG51285.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383140010|gb|AFG51286.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383140012|gb|AFG51287.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383140014|gb|AFG51288.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
Length = 75
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 68/74 (91%), Positives = 73/74 (98%)
Query: 362 IPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLS 421
IPEQCRLPMT+QDIKTGKDLLEEDFVKK+PGWV+ELNLMVKTK KAEIQALSSFGFQYLS
Sbjct: 2 IPEQCRLPMTDQDIKTGKDLLEEDFVKKSPGWVDELNLMVKTKHKAEIQALSSFGFQYLS 61
Query: 422 EVYLPLKLQQKDWL 435
EVYLPLKLQQ+DW+
Sbjct: 62 EVYLPLKLQQRDWI 75
>gi|330507581|ref|YP_004384009.1| DNA topoisomerase VI subunit A [Methanosaeta concilii GP6]
gi|328928389|gb|AEB68191.1| DNA topoisomerase VI subunit A [Methanosaeta concilii GP6]
Length = 375
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 177/352 (50%), Gaps = 25/352 (7%)
Query: 94 ETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTI 153
++L Q R ++ +PSR N + + D + D+ T+R S+ TVR +
Sbjct: 31 DSLYGQFQRGVVP----HISLPSRTKGNIEFSTKDDVWIYGDQETMR---SVKTVRGAKT 83
Query: 154 TVKILSL----IHQLCLRNIHVTKRDLFYT----DVKLFQDQTQSDAVLDDVACILGCTR 205
+K + L I + N T R+++Y D+ F +Q +SD +++D+ + R
Sbjct: 84 ILKTVHLTELLIDEHLKNNRGSTLREIYYISENWDIAKFHEQAESDRLIEDLEIVTDLHR 143
Query: 206 SSLNVIAAEKGVVV-GRLIFSDN---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMF 259
+V E G V G L + G+ + C + +G G IP N+D + + DA
Sbjct: 144 EDFHVRPEEDGAAVFGPLRLKEQTRRGEKEMHCQEDVGEAGYQIPFNVDNIEFINHDARM 203
Query: 260 ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDP 319
++ +E Y RL E+ F + I+V KGQP +TR ++++ EL LPV+ D DP
Sbjct: 204 VMAIETGGMYARLIENGFDEEYNAILVHIKGQPARSTRRIIKRLNTELNLPVVVFTDGDP 263
Query: 320 YGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGK 379
+ +I + G+ ++ S +L TP ++LG++PSD+ Y + +T++D++ K
Sbjct: 264 WSYRIFASIAYGAIKSAHLSDHLVTPKARFLGVQPSDIVDYNLSTD---KLTDRDLQALK 320
Query: 380 DLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
L D NP W ++++L + K+KAE QA + G ++++ YLP +L +
Sbjct: 321 SEL-SDPRFANPYWEKQIHLQIDLKKKAEQQAFAGKGLDFVTKTYLPDRLTE 371
>gi|452210942|ref|YP_007491056.1| DNA topoisomerase VI subunit A [Methanosarcina mazei Tuc01]
gi|452100844|gb|AGF97784.1| DNA topoisomerase VI subunit A [Methanosarcina mazei Tuc01]
Length = 369
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 180/360 (50%), Gaps = 39/360 (10%)
Query: 97 ILQIARSILAGNGFSFQV------PSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRK 150
+L+IA I N F +V PSR +N Y E D V D+ + R S TV+
Sbjct: 20 LLEIAEKIY--NQFEEEVVPSVSLPSRTKANLEYSDESDVWVYGDRESER---SAKTVKG 74
Query: 151 STITVKILS----LIHQLCLRNIHVTKRDLFYT----DVKLFQDQTQSDAVLDDVACILG 202
+ +K LI++ RN T R+L+Y D F++Q +SD +++D+ +
Sbjct: 75 AFQLLKTTYATDFLINEHLARNRGSTLRELYYISEGWDYAKFKEQVESDRLIEDLEILTS 134
Query: 203 CTRSSLNVIAAEKGVVV-GRLIFSDN---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSD 256
R ++ E G + G + ++ G+ I C K +G GG IP N++ + + D
Sbjct: 135 LQREYFHMRPEEDGATMFGPIEITEQTKRGERNIHCQKDVGEGGYQIPFNVENIEFQKHD 194
Query: 257 AMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVD 316
A I+ +E Y RL E+ F + I+V KGQP +TR +++M EL +PV D
Sbjct: 195 ASMIIAIETGGMYARLMENGFDEAYNAILVHLKGQPARSTRRIIKRMNEELGIPVAVFTD 254
Query: 317 SDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIK 376
DP+ +I + G+ ++ S + TP K+LG++PSD+ +Y++ +TEQD+
Sbjct: 255 GDPWSYRIYASVAYGAIKSAHLSEFMATPAAKFLGLQPSDIVEYELSTD---KLTEQDVS 311
Query: 377 TGKDLL-----EEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+ L E D+ W E++ L + +KAE QA + G +++EVYLP +L++
Sbjct: 312 ALRSELSDPRFESDY------WKEQIQLQLDIGKKAEQQAFAGKGLDFVTEVYLPNRLKE 365
>gi|21228520|ref|NP_634442.1| DNA topoisomerase VI subunit A [Methanosarcina mazei Go1]
gi|34395891|sp|Q8PUB7.1|TOP6A_METMA RecName: Full=Type II DNA topoisomerase VI subunit A
gi|152149434|pdb|2Q2E|A Chain A, Crystal Structure Of The Topoisomerase Vi Holoenzyme From
Methanosarcina Mazei
gi|20907006|gb|AAM32114.1| Type II DNA topoisomerase VI, subunit A [Methanosarcina mazei Go1]
Length = 369
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 180/360 (50%), Gaps = 39/360 (10%)
Query: 97 ILQIARSILAGNGFSFQV------PSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRK 150
+L+IA I N F +V PSR +N Y E D V D+ + R S TV+
Sbjct: 20 LLEIAEKIY--NQFEEEVVPSVSLPSRTKANLEYSDESDVWVYGDRESER---SAKTVKG 74
Query: 151 STITVKILS----LIHQLCLRNIHVTKRDLFYT----DVKLFQDQTQSDAVLDDVACILG 202
+ +K LI++ RN T R+L+Y D F++Q +SD +++D+ +
Sbjct: 75 AFQLLKTTYATDFLINEHLARNRGSTLRELYYISEGWDYAKFKEQGESDRLIEDLEILTS 134
Query: 203 CTRSSLNVIAAEKGVVV-GRLIFSDN---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSD 256
R ++ E G + G + ++ G+ I C K +G GG IP N++ + + D
Sbjct: 135 LQREYFHMRPEEDGATMFGPIEITEQTKRGERNIHCQKDVGEGGYQIPFNVENIEFQKHD 194
Query: 257 AMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVD 316
A I+ +E Y RL E+ F + I+V KGQP +TR +++M EL +PV D
Sbjct: 195 ASMIIAIETGGMYARLMENGFDEAYNAILVHLKGQPARSTRRIIKRMNEELGIPVAVFTD 254
Query: 317 SDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIK 376
DP+ +I + G+ ++ S + TP K+LG++PSD+ +Y++ +TEQD+
Sbjct: 255 GDPWSYRIYASVAYGAIKSAHLSEFMATPAAKFLGLQPSDIVEYELSTD---KLTEQDVS 311
Query: 377 TGKDLL-----EEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+ L E D+ W E++ L + +KAE QA + G +++EVYLP +L++
Sbjct: 312 ALRSELSDPRFESDY------WKEQIQLQLDIGKKAEQQAFAGKGLDFVTEVYLPNRLKE 365
>gi|284162141|ref|YP_003400764.1| DNA topoisomerase [Archaeoglobus profundus DSM 5631]
gi|284012138|gb|ADB58091.1| DNA topoisomerase (ATP-hydrolyzing) [Archaeoglobus profundus DSM
5631]
Length = 357
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 181/366 (49%), Gaps = 36/366 (9%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
SLS + S +E + Q+ R G ++ +R N + + V DK ++R S
Sbjct: 3 SLSKLLSIVENIYDQMKR----GEIPEIKLTTRTKQNIEFKESSEVWVYGDKKSVRSAKS 58
Query: 145 LSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTD----VKLFQDQTQSDAVLDDVACI 200
+ + V ++ + + +N T R+L+Y + F +Q +SD +++D+ +
Sbjct: 59 VKGAYQLLRMVYVIGFLKEQLSQNRSSTLRELYYISENWGIAKFNEQMESDRLIEDLEIL 118
Query: 201 LGCTRSSLNVIAAEKGVVVGRLIFSD--------NGD-MIDCTK-MGMGGKAIPPNIDRV 250
G R S NV E G V F D G+ +I C +G G IP N+D +
Sbjct: 119 TGLQRESFNVRPEEDGATV----FGDIKIREKTRRGERVIHCQDDVGEAGYQIPTNVDNI 174
Query: 251 GDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLP 310
++ +A F++ +E RL E+ F + IIV KGQP +TR LR++ EL LP
Sbjct: 175 EFLECNADFVIAIETGGMRDRLVENGFDEDYNAIIVHLKGQPARSTRRLLRRLNTELGLP 234
Query: 311 VLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPM 370
V+ D DP+ +I + GS ++ S L TP ++GIRPSD+ KYK+P +
Sbjct: 235 VVVFTDGDPWSYRIYASVAYGSIKSAHLSEYLATPSAMFVGIRPSDILKYKLPSD---KL 291
Query: 371 TEQDIKTGKDLL-----EEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYL 425
T++DIK +L + DF W E+ L ++ +K+E QAL+ +G ++++VYL
Sbjct: 292 TDEDIKALNAILSDPRFDSDF------WRREIKLQLELGRKSEQQALAKYGLSFVTDVYL 345
Query: 426 PLKLQQ 431
P +L +
Sbjct: 346 PERLTE 351
>gi|209945800|gb|ACI97131.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 174/327 (53%), Gaps = 21/327 (6%)
Query: 92 TIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKS 151
IE + L++ +++ GN + VP +S N + E R+ ++ + F L
Sbjct: 7 NIERIALELLSNLVHGNA-TLSVPRNSSGN--VISEYRRVSYNNRGSRHSFCVL------ 57
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ +LS +H+L +R T R L+Y + L + Q++ DV +L + SL ++
Sbjct: 58 ---IYMLSRVHRLQVRGGSFTVRGLYYDNPLLVRSQSRIAEARLDVCRMLRTSPISLGIL 114
Query: 212 AAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYI 270
AA KG+V G L + NGD++D + G G +P + +++ +++ A F+L+VEK++ +
Sbjct: 115 AASKGLVAGDLRLLMTNGDVLDSSLYG-GPLTLPTDPEKIDRIETLAEFVLIVEKESVFE 173
Query: 271 RLAEDRFYNRFP--CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVY 328
L + F I++T KG PD TR + ++ E +L LVD+DP+G++I+ VY
Sbjct: 174 SLLSRNVFGTFERRFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVY 233
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVK 388
GSK+MS+ S LTTP ++W+G+ PS++ + + D K DLL ++
Sbjct: 234 RHGSKSMSFSSQGLTTPALRWIGLHPSEIPALGTGA---VALVAGDNKKINDLLARHDLE 290
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSF 415
PG +EL ++ + KAEI+++ F
Sbjct: 291 --PGVRQELRMLQDVQLKAEIESVIDF 315
>gi|209945746|gb|ACI97104.1| meiotic W68 [Drosophila simulans]
gi|209945752|gb|ACI97107.1| meiotic W68 [Drosophila simulans]
gi|209945754|gb|ACI97108.1| meiotic W68 [Drosophila simulans]
Length = 319
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 173/327 (52%), Gaps = 21/327 (6%)
Query: 92 TIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKS 151
IE + L++ +++ GN + VP +S N + E R+ ++ + F L
Sbjct: 7 NIERIALELLSNLVHGNA-TLSVPRNSSGN--VISEYRRVSYNNRGSRHSFCVL------ 57
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ +LS +H+L +R T R L+Y + L + Q++ DV +L + SL ++
Sbjct: 58 ---IYMLSRVHRLQVRGGSFTVRGLYYDNPLLVRSQSRIAEARLDVCRMLSTSPLSLGIL 114
Query: 212 AAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYI 270
AA KG+V G L + NGD++D + G G +P + ++ +++ A F+L+VEK++ +
Sbjct: 115 AASKGLVAGDLRLLMTNGDVLDSSLYG-GPLTLPTDPAKIDRIETQAEFVLIVEKESVFE 173
Query: 271 RLAEDRFYNRFP--CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVY 328
L + F I++T KG PD TR + ++ E +L LVD+DP+G++I+ VY
Sbjct: 174 SLLSRNVFGTFKRRFILITGKGYPDCCTRRIVHRLTEENQLEAYILVDADPFGVEIMLVY 233
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVK 388
GS++MS+ S LTTP ++W+G+ PS++ + + D K DLL ++
Sbjct: 234 RHGSQSMSFSSQGLTTPALRWIGLHPSEIPALGTGA---VALVAGDNKKINDLLARHNLE 290
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSF 415
PG +EL ++ + KAEI+++ F
Sbjct: 291 --PGVRQELRMLQDVQLKAEIESVIDF 315
>gi|14591345|ref|NP_143423.1| DNA topoisomerase VI subunit A [Pyrococcus horikoshii OT3]
gi|3257992|dbj|BAA30675.1| 301aa long hypothetical typeII DNA topoisomerase subunit A
[Pyrococcus horikoshii OT3]
Length = 301
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 158/296 (53%), Gaps = 20/296 (6%)
Query: 154 TVKILSLIHQLCLRNIHVTKRDLFY--------TDVKLFQDQTQSDAVLDDVACILGCTR 205
T+ +++ I +L H + R+ +Y T F+DQ++SD +++D+ +LG R
Sbjct: 3 TLILMAYIKRLVSEGKHASLREAYYANKHTVPGTRENTFEDQSESDPIIEDLERMLGVLR 62
Query: 206 SSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
+++ A +G + G ++ D D + +K+G GG A+P ++ + + + ++L+VE
Sbjct: 63 EEMHITADRRGYIYGDIVIKDGEDEFNASKLGTGGWAVPGTVEHIQFPEINVDYVLVVET 122
Query: 266 DAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKIL 325
A RL E+++ R C+IV +GQ R + ++ E LP++ D DPYG I
Sbjct: 123 AAMADRLIEEKYPKRENCLIVATQGQASRGVRRLIHRLHYEEGLPIIVFTDGDPYGWYIY 182
Query: 326 SVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY---KIPEQCR-LPMTEQDIKTG--K 379
S GS N++Y S L TPD K++G+ D+ +Y + E+ + +P ++ TG K
Sbjct: 183 STIKRGSINLAYLSEKLATPDAKFVGMTMDDIKEYNLENVTEKLKGIPPDKKGGPTGDYK 242
Query: 380 DLLEE----DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
L+EE F K W +L L +K + E QAL++ +++++ YLP K+++
Sbjct: 243 RLIEELNYPWFQDKE--WQRQLKLALKWGVRIEQQALANKSLEFVAKEYLPEKIRE 296
>gi|209945744|gb|ACI97103.1| meiotic W68 [Drosophila simulans]
Length = 319
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 173/327 (52%), Gaps = 21/327 (6%)
Query: 92 TIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKS 151
IE + L++ +++ GN + VP +S N + E R+ ++ + F L
Sbjct: 7 NIERIALELLSNLVHGNA-TLSVPRNSSGN--VISEYRRVSYNNRGSRHSFCVL------ 57
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ +LS +H+L +R T R L+Y + L + Q++ DV +L + SL ++
Sbjct: 58 ---IYMLSRVHRLQVRGGSFTVRGLYYDNPLLVRSQSRIAEARLDVCRMLSTSPLSLGIL 114
Query: 212 AAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYI 270
AA KG+V G L + NGD++D + G G +P + ++ +++ A F+L+VEK++ +
Sbjct: 115 AASKGLVAGDLRLLMTNGDVLDSSLYG-GPLTLPTDPAKIDRIETQAEFVLIVEKESVFE 173
Query: 271 RLAEDRFYNRFP--CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVY 328
L + F I++T KG PD TR + ++ E +L LVD+DP+G++I+ VY
Sbjct: 174 SLLSRNVFGTFKRRFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVY 233
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVK 388
GS++MS+ S LTTP ++W+G+ PS++ + + D K DLL ++
Sbjct: 234 RHGSQSMSFSSQGLTTPALRWIGLHPSEIPALGTGA---VALVAGDNKKINDLLARHNLE 290
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSF 415
PG +EL ++ + KAEI+++ F
Sbjct: 291 --PGVRQELRMLQDVQLKAEIESVIDF 315
>gi|429190415|ref|YP_007176093.1| DNA topoisomerase VI, subunit A [Natronobacterium gregoryi SP2]
gi|448326327|ref|ZP_21515693.1| DNA topoisomerase VI subunit A [Natronobacterium gregoryi SP2]
gi|429134633|gb|AFZ71644.1| DNA topoisomerase VI, subunit A [Natronobacterium gregoryi SP2]
gi|445612542|gb|ELY66263.1| DNA topoisomerase VI subunit A [Natronobacterium gregoryi SP2]
Length = 363
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 168/333 (50%), Gaps = 22/333 (6%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
VP+R +N Y + D V D+ + R S+ RK V + + + T
Sbjct: 34 VPTRTKNNIEYDEDSDVWVYGDRESTRSANSVRGARKLLKAVYTIDFLADQLEEDRSSTL 93
Query: 174 RDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y + F DQ +S+++++D+ + G TR ++ E G ++G L +
Sbjct: 94 RELYYLSESWDNEEAQFSDQDESNSLIEDLEIVSGVTREDFHMRPEESGATIMGPLHLRE 153
Query: 227 N---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
G+ I C + +G GG IP N D + + +A FIL VE RL E+ F +
Sbjct: 154 QTRRGEREIHCQEDVGEGGYQIPNNPDTIEFLDCEADFILAVETGGMRDRLVENGFDEEY 213
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
+IV KGQP ATR ++++ EL LPV D DP+ +I GS ++ S
Sbjct: 214 NALIVHLKGQPARATRRITKRLRDELSLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEY 273
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVK---KNPGWVEELN 398
L TP +++G++P+D+ +Y +P P+++ D K+ LE + + W E++
Sbjct: 274 LATPQAQFIGVQPADIVEYDLPTD---PLSDSD----KNALESELSDPRFQTDYWEEQIE 326
Query: 399 LMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
L ++ ++K+E Q+L+S G +++E YLP +L +
Sbjct: 327 LQLEIEKKSEQQSLASHGLDFVTETYLPERLSE 359
>gi|209945760|gb|ACI97111.1| meiotic W68 [Drosophila melanogaster]
gi|209945762|gb|ACI97112.1| meiotic W68 [Drosophila melanogaster]
gi|209945764|gb|ACI97113.1| meiotic W68 [Drosophila melanogaster]
gi|209945766|gb|ACI97114.1| meiotic W68 [Drosophila melanogaster]
gi|209945770|gb|ACI97116.1| meiotic W68 [Drosophila melanogaster]
gi|209945772|gb|ACI97117.1| meiotic W68 [Drosophila melanogaster]
gi|209945774|gb|ACI97118.1| meiotic W68 [Drosophila melanogaster]
gi|209945776|gb|ACI97119.1| meiotic W68 [Drosophila melanogaster]
gi|209945778|gb|ACI97120.1| meiotic W68 [Drosophila melanogaster]
gi|209945780|gb|ACI97121.1| meiotic W68 [Drosophila melanogaster]
gi|209945782|gb|ACI97122.1| meiotic W68 [Drosophila melanogaster]
gi|209945784|gb|ACI97123.1| meiotic W68 [Drosophila melanogaster]
gi|209945786|gb|ACI97124.1| meiotic W68 [Drosophila melanogaster]
gi|209945788|gb|ACI97125.1| meiotic W68 [Drosophila melanogaster]
gi|209945794|gb|ACI97128.1| meiotic W68 [Drosophila melanogaster]
gi|209945796|gb|ACI97129.1| meiotic W68 [Drosophila melanogaster]
gi|209945802|gb|ACI97132.1| meiotic W68 [Drosophila melanogaster]
gi|209945804|gb|ACI97133.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 174/327 (53%), Gaps = 21/327 (6%)
Query: 92 TIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKS 151
IE + L++ +++ GN + VP +S N + E R+ ++ + F L
Sbjct: 7 NIERIALELLSNLVHGNA-TLSVPRNSSGN--VISEYRRVSYNNRGSRHSFCVL------ 57
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ +LS +H+L +R T R L+Y + L + Q++ DV +L + SL ++
Sbjct: 58 ---IYMLSRVHRLQVRGGSFTVRGLYYDNPLLVRSQSRIAEARLDVCRMLRTSPLSLGIL 114
Query: 212 AAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYI 270
AA KG+V G L + NGD++D + G G +P + +++ +++ A F+L+VEK++ +
Sbjct: 115 AASKGLVAGDLRLLMTNGDVLDSSLYG-GPLTLPTDPEKIDRIETLAEFVLIVEKESVFE 173
Query: 271 RLAEDRFYNRFP--CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVY 328
L + F I++T KG PD TR + ++ E +L LVD+DP+G++I+ VY
Sbjct: 174 SLLSRNVFGTFERRFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVY 233
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVK 388
GSK+MS+ S LTTP ++W+G+ PS++ + + D K DLL ++
Sbjct: 234 RHGSKSMSFSSQGLTTPALRWIGLHPSEIPALGTGA---VALVAGDNKKINDLLARHDLE 290
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSF 415
PG +EL ++ + KAEI+++ F
Sbjct: 291 --PGVRQELRMLQDVQLKAEIESVIDF 315
>gi|209945798|gb|ACI97130.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 174/327 (53%), Gaps = 21/327 (6%)
Query: 92 TIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKS 151
IE + L++ +++ GN + VP +S N + E R+ ++ + F L
Sbjct: 7 NIERIALELLSNLVHGNA-TLSVPRNSSGN--VISEYRRVSYNNRGSRHSFCVL------ 57
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ +LS +H+L +R T R L+Y + L + Q++ DV +L + SL ++
Sbjct: 58 ---IYMLSRVHRLQVRGGSFTIRGLYYDNPLLVRSQSRIAEARLDVCRMLRTSPLSLGIL 114
Query: 212 AAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYI 270
AA KG+V G L + NGD++D + G G +P + +++ +++ A F+L+VEK++ +
Sbjct: 115 AASKGLVAGDLRLLMTNGDVLDSSLYG-GPLTLPTDPEKIDRIETLAEFVLIVEKESVFE 173
Query: 271 RLAEDRFYNRFP--CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVY 328
L + F I++T KG PD TR + ++ E +L LVD+DP+G++I+ VY
Sbjct: 174 SLLSRNVFGTFERRFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVY 233
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVK 388
GSK+MS+ S LTTP ++W+G+ PS++ + + D K DLL ++
Sbjct: 234 RHGSKSMSFSSQGLTTPALRWIGLHPSEIPALGTGA---VALVAGDNKKINDLLARHDLE 290
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSF 415
PG +EL ++ + KAEI+++ F
Sbjct: 291 --PGVRQELRMLQDVQLKAEIESVIDF 315
>gi|195122807|ref|XP_002005902.1| GI20732 [Drosophila mojavensis]
gi|193910970|gb|EDW09837.1| GI20732 [Drosophila mojavensis]
Length = 325
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 165/292 (56%), Gaps = 17/292 (5%)
Query: 149 RKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSL 208
+ + V +L+ IHQL L T R L+Y + ++ + Q+ DA DV +L +L
Sbjct: 46 HRFCLIVYLLAEIHQLHLTGGSCTIRGLYYRNTQVVRSQSYIDAAKMDVCRMLNTAPVNL 105
Query: 209 NVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDA 267
+++A KG++ G + + +NGD++DC + G +P + + V + ++A +L+VEK++
Sbjct: 106 GILSASKGLITGDIKLLMNNGDVLDC-NVYCGAITLPTDFENVERIVTNAEMVLIVEKES 164
Query: 268 AYIRL----AEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLK 323
+ L A F RF I++T KG PD TR + ++ +E LP LVD+DP+G++
Sbjct: 165 VFESLLACNALSTFGLRF--ILLTGKGYPDCTTRRIVYRLTVECNLPAYILVDADPFGIE 222
Query: 324 ILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLE 383
I+ VY GS+ M++ + +L TP ++W+G+ PS++D I + +P+T+ D K D+L
Sbjct: 223 IMLVYQLGSQAMNFSAKSLATPTLRWIGLHPSEID--SISNR-SVPLTQHDNKKIVDILS 279
Query: 384 EDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+ G +EL + + + KAEI+++ F LS Y+P K+ + ++
Sbjct: 280 RS--NLSLGVRQELCRLQQVQLKAEIESVIDF----LSPYYIPTKINRNLFI 325
>gi|322370368|ref|ZP_08044927.1| DNA topoisomerase (ATP-hydrolyzing) [Haladaptatus paucihalophilus
DX253]
gi|320550076|gb|EFW91731.1| DNA topoisomerase (ATP-hydrolyzing) [Haladaptatus paucihalophilus
DX253]
Length = 364
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 164/331 (49%), Gaps = 22/331 (6%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
+P+R SN Y + + V D+ + R S+ RK V + + + T
Sbjct: 35 IPTRTKSNIEYDEDSNVWVYGDRKSTRSANSVRGARKLLKAVYTIDFLTNQLEEDRSSTL 94
Query: 174 RDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIF-- 224
R+L+Y D F Q +S+ +++D+ + TR ++ E G V+G L+
Sbjct: 95 RELYYLSESWDADEAQFSTQDESNQLIEDLEIVSEVTREDFHMRPEESGAKVMGPLLLRE 154
Query: 225 -SDNGDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
++ GD I C +G GG IP N D + + +DA F+L VE RL E+ F +
Sbjct: 155 QTNRGDREIHCQDDVGQGGYQIPNNPDTIEFLDNDADFVLCVETGGMRDRLVENGFDEEY 214
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
IIV GQP ATR +++ EL LPV D DP+ +I GS ++ S
Sbjct: 215 NTIIVHLGGQPARATRRLTKRLHEELDLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSDY 274
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLE---EDFVKKNPGWVEELN 398
L TP+ K++GI+P D+ +Y +P P+++ D K+ LE ED + W E++
Sbjct: 275 LATPEAKFIGIQPKDIVEYDLPTD---PLSDSD----KNALESELEDPRYQTDYWEEQIE 327
Query: 399 LMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
L + ++K+E QAL+S G ++++ YLP +L
Sbjct: 328 LQLDIEKKSEQQALASHGLDFVTDTYLPERL 358
>gi|209945748|gb|ACI97105.1| meiotic W68 [Drosophila simulans]
Length = 319
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 173/327 (52%), Gaps = 21/327 (6%)
Query: 92 TIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKS 151
IE + L++ +++ GN + VP +S N + E R+ ++ + F L
Sbjct: 7 NIERIALELLSNLVHGNA-TLSVPRNSSGN--VISEYRRVSYNNRGSRHSFCVL------ 57
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ +LS +H+L +R T R L+Y + L + Q++ DV +L + SL ++
Sbjct: 58 ---IYMLSRVHRLQVRGGSFTVRGLYYDNPLLVRSQSRIAEARLDVCRMLSTSPLSLGIL 114
Query: 212 AAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYI 270
AA KG+V G L + NGD++D + G G +P + +++ +++ A F+L+VEK++ +
Sbjct: 115 AASKGLVAGDLRLLMTNGDVLDSSLYG-GPLTLPTDPEKIDRIETQAEFVLIVEKESVFE 173
Query: 271 RLAEDRFYNRFP--CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVY 328
L + F I++T KG PD TR + ++ E +L LVD+DP+G++I+ VY
Sbjct: 174 SLLSRNVFGTFKRRFILITGKGYPDCCTRRIVHRLTEENQLEAYILVDADPFGVEIMLVY 233
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVK 388
GS++M + S LTTP ++W+G+ PS++ + + D K DLL ++
Sbjct: 234 RHGSQSMCFSSQGLTTPALRWIGLHPSEIPALGTGA---VALVAGDNKKINDLLARHNLE 290
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSF 415
PG +EL ++ + KAEI+++ F
Sbjct: 291 --PGVRQELRMLQDVQLKAEIESVIDF 315
>gi|433590828|ref|YP_007280324.1| DNA topoisomerase VI, subunit A [Natrinema pellirubrum DSM 15624]
gi|433305608|gb|AGB31420.1| DNA topoisomerase VI, subunit A [Natrinema pellirubrum DSM 15624]
Length = 363
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 164/328 (50%), Gaps = 16/328 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
VP+R +N Y + D V D+ + R S+ RK V + + + T
Sbjct: 34 VPTRTKNNIEYDEDKDVWVYGDRESTRSANSVQGARKLLKAVYTIEFLADQLEEDRSSTL 93
Query: 174 RDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y + F Q +S+ +++D+ + G TR ++ E G ++G L +
Sbjct: 94 RELYYLSESWDNEEAQFSSQDESNNLVEDLEIVSGVTREDFHMRPEESGATIMGPLHLRE 153
Query: 227 N---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
G+ I C + +G GG IP N D + + SDA FIL VE RL E+ F F
Sbjct: 154 QTRRGEREIHCQEDVGEGGYQIPNNPDTIEFLGSDADFILAVETGGMRDRLVENGFDEEF 213
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
+IV KGQP ATR +++ EL LPV D DP+ +I GS ++ S
Sbjct: 214 NALIVHLKGQPARATRRITKRLHDELDLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEY 273
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ ++GI+P+D+ +Y +P P+++ DI + LE+ + + W E++ L +
Sbjct: 274 LATPEADFIGIQPADIVEYDLPSD---PLSDSDINALESELEDPRFQTDY-WEEQIELQL 329
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKL 429
+K+E Q+L++ G ++++ YLP +L
Sbjct: 330 DLGKKSEQQSLAARGLDFVTDTYLPERL 357
>gi|410672036|ref|YP_006924407.1| DNA topoisomerase VI subunit A [Methanolobus psychrophilus R15]
gi|409171164|gb|AFV25039.1| DNA topoisomerase VI subunit A [Methanolobus psychrophilus R15]
Length = 369
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 170/334 (50%), Gaps = 25/334 (7%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILS-LIHQLCLRNIHVT 172
+P+R N Y E D V D+ T R ++ + T ++ L++ +N T
Sbjct: 41 LPTRTKKNIEYSDESDVWVYGDRETERSAKTVKGAFQLLKTTHVVDFLVNNHLNQNRGST 100
Query: 173 KRDLFYT----DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-----VVGRLI 223
R+L+Y D+ F++Q +SD +++D+ I G R ++ E G V R
Sbjct: 101 LRELYYISENWDIAKFREQPESDRLIEDLEIISGLQREYFHMRPEEDGATMFGPVRIREE 160
Query: 224 FSDNGDMIDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFP 282
+I C + +G G IP N++ + + DA FI+ +E Y RL E+ F ++
Sbjct: 161 TKRGNRVIHCQEDIGESGYQIPFNVENIEFLDHDADFIIAIETGGMYARLIENGFDEKYN 220
Query: 283 CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANL 342
++V KGQP +TR +++M ELKLPV+ D DP+ +I + G+ ++ S ++
Sbjct: 221 AVLVHLKGQPARSTRRIIKRMNDELKLPVVVFTDGDPWSYRIFASVAYGAIKSAHLSEHM 280
Query: 343 TTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLL-----EEDFVKKNPGWVEEL 397
TP +++G++PSD+ +Y++ +T++D+ + L E D+ W E++
Sbjct: 281 ATPGAQFIGVQPSDIVEYELSTD---KLTDKDVAALRSELTDPRFETDY------WKEQI 331
Query: 398 NLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
NL ++ +KAE QA + G ++++ YLP +L +
Sbjct: 332 NLQLEINKKAEQQAFAGKGLDFVTDTYLPNRLTE 365
>gi|195431580|ref|XP_002063814.1| GK15872 [Drosophila willistoni]
gi|194159899|gb|EDW74800.1| GK15872 [Drosophila willistoni]
Length = 346
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 186/357 (52%), Gaps = 32/357 (8%)
Query: 89 VQSTIETLILQIARSILAGNGFSFQVP----SRASSNQLYVPELDRIVLKDKTTLRPFAS 144
+ + +E L++++ ++ +F+VP R + +++ P R V + R
Sbjct: 12 ILNNLERLVMEMLLELVMRGSATFKVPRYRTEREKNGEIHSPF--RCVTYNNNRSR---- 65
Query: 145 LSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT 204
+ + + +L+ IH+L T R L+Y + +L + Q+ A DV IL
Sbjct: 66 ----HRFCLLIYMLAEIHRLLAEGGSCTVRGLYYRNTQLIRAQSFIVAAKLDVCRILNTA 121
Query: 205 RSSLNVIAAEKGVVVG--RLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILL 262
L +++A KG++ G R+ S NGD++DC G G ++P + + V + + A +L+
Sbjct: 122 PFHLGILSASKGLLAGDIRMTMS-NGDILDCNAYG-GAISLPIDFENVDHIDTRAELVLI 179
Query: 263 VEKDAAYIRLAEDRFYNRFPC--IIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
VEK++ + L +N F I+VT KG PD +TR + ++ ME LP LVD+DP+
Sbjct: 180 VEKESVFESLLSRNIFNSFGIRLILVTGKGYPDCSTRRLVHRLTMEFNLPAYILVDADPF 239
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 380
G++I+ VY GS+++ + S L TP ++W+G+ PS++ I P++++D K D
Sbjct: 240 GIEIMLVYRHGSQSLDFTSNLLATPSLRWVGLHPSEICSLAIGGTA--PLSQEDNKKIND 297
Query: 381 LLEEDFVKKNP--GWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+L +KN G +EL + + + KAEI+++ F L Y+P K+ + +L
Sbjct: 298 MLN----RKNMDLGVRQELYKLQQMQLKAEIESVLDF----LCGDYIPNKVNRNLFL 346
>gi|110668560|ref|YP_658371.1| DNA topoisomerase VI subunit A [Haloquadratum walsbyi DSM 16790]
gi|385804025|ref|YP_005840425.1| DNA topoisomerase VI subunit A (type II DNA topoisomerase)
[Haloquadratum walsbyi C23]
gi|109626307|emb|CAJ52765.1| DNA topoisomerase VI subunit A [Haloquadratum walsbyi DSM 16790]
gi|339729517|emb|CCC40780.1| DNA topoisomerase VI subunit A [Haloquadratum walsbyi C23]
Length = 364
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 172/336 (51%), Gaps = 16/336 (4%)
Query: 106 AGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLC 165
+G+ + ++P+R +N ++ + + V D+T+ R S+ RK + +
Sbjct: 27 SGDIPAMEIPTRTKTNIVFDEDSEVWVYGDRTSTRSANSVRGARKLLKAAYTIEFLVDQL 86
Query: 166 LRNIHVTKRDLFYTDVKL------FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-V 218
+ T R+L+Y F DQ +S+ +++D+ + TR ++ E G +
Sbjct: 87 EEDRSSTLRELYYLSESWDNKEAQFSDQDESNQLVEDLEIVSKVTREDFHMRPEESGATL 146
Query: 219 VGRLIFSDN---GD-MIDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
+G L + G+ I C + +G GG IP N D + + D F+L VE RL
Sbjct: 147 MGPLELREQTRRGERAIHCQEDVGEGGYQIPNNPDTIDFLDHDIDFVLCVETGGMRDRLI 206
Query: 274 EDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSK 333
E+ F + + C+IV KGQP ATR +++ EL +PV+ D DP+ +I GS
Sbjct: 207 ENGFDDMYNCLIVHLKGQPARATRRITKRLHDELSVPVVVFTDGDPWSYRIYGSVAYGSI 266
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
++ S L TP+ +++GI+P+D+ +Y++P P+ + D+ + L ED ++ W
Sbjct: 267 KSAHLSEYLATPEARFIGIQPTDIVEYELPTD---PLADSDVNALESEL-EDPRFQSEYW 322
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
E++ L + ++KAE Q+L+S G +++E YLP +L
Sbjct: 323 TEQIELQLDIEKKAEQQSLASRGLDFVTETYLPERL 358
>gi|448385303|ref|ZP_21563809.1| DNA topoisomerase VI subunit A [Haloterrigena thermotolerans DSM
11522]
gi|445656798|gb|ELZ09630.1| DNA topoisomerase VI subunit A [Haloterrigena thermotolerans DSM
11522]
Length = 351
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 165/330 (50%), Gaps = 16/330 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
VP+R +N Y + D V D+ + R S+ RK V + + + T
Sbjct: 22 VPTRTKNNIEYDEDKDVWVYGDRESTRSANSVQGARKLLKAVYTIEFLADQLEEDRSSTL 81
Query: 174 RDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y + F Q +S+ +++D+ + G TR ++ E G ++G L +
Sbjct: 82 RELYYLSESWDNEEAQFSSQDESNNLVEDLEIVSGVTREDFHMRPEESGATIMGPLHLRE 141
Query: 227 N---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
G+ I C + +G GG IP N D + + SDA FIL VE RL E+ F F
Sbjct: 142 QTRRGEREIHCQEDVGEGGYQIPNNPDTIEFLGSDADFILAVETGGMRDRLVENGFDEEF 201
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
+IV KGQP ATR +++ EL LPV D DP+ +I GS ++ S
Sbjct: 202 NALIVHLKGQPARATRRITKRLHDELDLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEY 261
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ ++GI+P+D+ +Y +P P+++ DI + LE+ + + W E++ L +
Sbjct: 262 LATPEADFIGIQPADIVEYDLPSD---PLSDSDINALESELEDPRFQTDY-WEEQIELQL 317
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+K+E Q+L++ G ++++ YLP +L +
Sbjct: 318 DLGKKSEQQSLAARGLDFVTDTYLPERLGE 347
>gi|209945758|gb|ACI97110.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 174/327 (53%), Gaps = 21/327 (6%)
Query: 92 TIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKS 151
IE + L++ +++ GN + VP +S N + E R+ ++ + F L
Sbjct: 7 NIERIALELLSNLVHGNA-TLSVPRNSSGN--VISEYRRVSYNNRGSRHSFCVL------ 57
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ +LS +H+L +R T R L+Y + L + Q++ DV +L + +L ++
Sbjct: 58 ---IYMLSRVHRLQVRGGSFTVRGLYYDNPLLVRSQSRIAEARLDVCRMLRTSPLNLGIL 114
Query: 212 AAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYI 270
AA KG+V G L + NGD++D + G G +P + +++ +++ A F+L+VEK++ +
Sbjct: 115 AASKGLVAGDLRLLMTNGDVLDSSLYG-GPLTLPTDPEKIDRIETLAEFVLIVEKESVFE 173
Query: 271 RLAEDRFYNRFP--CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVY 328
L + F I++T KG PD TR + ++ E +L LVD+DP+G++I+ VY
Sbjct: 174 SLLSRNVFGTFERRFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVY 233
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVK 388
GSK+MS+ S LTTP ++W+G+ PS++ + + D K DLL ++
Sbjct: 234 RHGSKSMSFSSQGLTTPALRWIGLHPSEIPALGTGA---VALVAGDNKKINDLLARHDLE 290
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSF 415
PG +EL ++ + KAEI+++ F
Sbjct: 291 --PGVRQELRMLQDVQLKAEIESVIDF 315
>gi|209880219|ref|XP_002141549.1| DNA topoisomerase [Cryptosporidium muris RN66]
gi|209557155|gb|EEA07200.1| DNA topoisomerase, putative [Cryptosporidium muris RN66]
Length = 331
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 161/308 (52%), Gaps = 19/308 (6%)
Query: 134 KDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAV 193
K+ TLR A + V + +H + + ++ R+L+Y + LF +Q Q+ +
Sbjct: 37 KNSITLRYIAKVICVANT---------LHNVIQQGRRMSLRELYYHNTWLFDNQNQATVI 87
Query: 194 LDDVACILGCTRSSLNVIAAEKGVVVGRLIFS-DNGDMIDCTKMGMGGKAIPPNIDRVGD 252
+ ++ +L R +L + + KG++ GR+ F + ++++ MG+ G I N + +G+
Sbjct: 88 VRKISIMLRIPRRTLGLFPSPKGMIGGRITFRYKDIEVLNIYNMGITGAIIGDNFEDIGE 147
Query: 253 -----MQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL 307
++SDA +I+++EK + + L E + +RF CI++T KG PD+ATR + + +L
Sbjct: 148 QSNIEVESDAQYIIIIEKASIFQYLMERKISDRFSCILITGKGFPDIATRKLISYLVYKL 207
Query: 308 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR 367
K+ L L D DP G+ I Y GS N Y+S + P I ++GI D + +P +
Sbjct: 208 KITTLYLGDYDPPGINIYLTYVRGSDN--YESLIVACPHIYFMGIHYE--DTFDLPCTTQ 263
Query: 368 LPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPL 427
+P+T+ D +LL + VK + +M K+ K E++A + +L YLP
Sbjct: 264 IPLTKNDKTVLSNLLSDPIVKACNKLHGQCKMMFKSGYKCELEAFQAISSDFLVNSYLPN 323
Query: 428 KLQQKDWL 435
KL ++ W+
Sbjct: 324 KLLKRSWI 331
>gi|34395897|sp|Q8TQF8.2|TOP6A_METAC RecName: Full=Type II DNA topoisomerase VI subunit A
Length = 373
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 169/335 (50%), Gaps = 21/335 (6%)
Query: 111 SFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILS----LIHQLCL 166
S +PSR +N Y E D V D+ + R S TV+ + +K LI++
Sbjct: 42 SVSLPSRTKANIEYSDESDVWVYGDRESER---SAKTVKGAFQLLKTTYATDFLINEHLA 98
Query: 167 RNIHVTKRDLFYT----DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVV-GR 221
N T R+L+Y D F++Q +SD +++D+ + R ++ E G + G
Sbjct: 99 HNRGSTLRELYYISEGWDYAKFKEQAESDRLIEDLELLTSLQREYFHMRPEEDGATMFGP 158
Query: 222 LIFSD----NGDMIDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDR 276
+ S+ I C K +G GG IP N++ + DA I+ +E Y RL E+
Sbjct: 159 IEISELTKRGARNIHCQKDVGEGGYQIPFNVENIEFKNHDASMIIAIETGGMYARLMENG 218
Query: 277 FYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMS 336
F + I+V KGQP +TR +++M EL++PV D DP+ +I + G+ +
Sbjct: 219 FDEAYNAILVHLKGQPARSTRRIIKRMNEELEIPVAVFTDGDPWSYRIYASVAYGAIKSA 278
Query: 337 YDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEE 396
+ S + TP ++LG++PSD+ +Y++ +TEQDI + L D ++ W E+
Sbjct: 279 HLSEFMATPAARFLGLQPSDIVEYELSTD---KLTEQDISALRSEL-SDPRFESEYWKEQ 334
Query: 397 LNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+ L + +KAE QA + G +++EVYLP +L++
Sbjct: 335 IQLQLDIGKKAEQQAFAGKGLDFVTEVYLPNRLKE 369
>gi|448733641|ref|ZP_21715883.1| DNA topoisomerase VI subunit A [Halococcus salifodinae DSM 8989]
gi|445802161|gb|EMA52468.1| DNA topoisomerase VI subunit A [Halococcus salifodinae DSM 8989]
Length = 412
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 164/336 (48%), Gaps = 16/336 (4%)
Query: 106 AGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLC 165
AG ++P+R SN Y E D V D+ + R S+ RK + + +
Sbjct: 30 AGEIPEMEIPTRTKSNIEYDEEGDVWVYGDRQSTRSANSVRGARKLLKAIYTIDFLADQL 89
Query: 166 LRNIHVTKRDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-V 218
+ T R+L+Y + F DQ +S+ +++D+ + TR ++ E G V
Sbjct: 90 DEDRSSTLRELYYLSESWDNEEAQFNDQDESNQLIEDLEIVSEVTREDFHMRPEESGAKV 149
Query: 219 VGRLIF---SDNGDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
+G L ++ GD I C +G GG IP N D + + DA F+L VE RL
Sbjct: 150 MGPLRIREQTNRGDREIHCQDDVGQGGYQIPNNPDTIEFLDHDAEFVLCVETGGMRDRLV 209
Query: 274 EDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSK 333
E+ F F I+V GQP ATR +++ EL LPV+ D DP+ +I GS
Sbjct: 210 ENGFDEDFNTIVVHLGGQPARATRRLTKRLHDELDLPVVVFTDGDPWSYRIYGSVAYGSI 269
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
++ S L TP+ +++GI+P D+ +Y +P P+ + D+ + L + + + W
Sbjct: 270 KSAHLSNYLATPEAQFIGIQPEDIVEYDLPTD---PLADSDVNALESELTDPRFQTDY-W 325
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
E++ L + +KAE Q+L++ G ++++ YLP +L
Sbjct: 326 REQIELQLDINKKAEQQSLAARGLDFVTDTYLPERL 361
>gi|11498545|ref|NP_069773.1| DNA topoisomerase VI subunit A [Archaeoglobus fulgidus DSM 4304]
gi|3122956|sp|O29322.1|TOP6A_ARCFU RecName: Full=Type II DNA topoisomerase VI subunit A
gi|2649657|gb|AAB90299.1| DNA topoisomerase VI, subunit A (top6A) [Archaeoglobus fulgidus DSM
4304]
Length = 360
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 179/350 (51%), Gaps = 22/350 (6%)
Query: 96 LILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITV 155
++ I + AG + +R N + E + V D+ ++R S TV+ + +
Sbjct: 15 IVQNIYDQMKAGQVPELHIATRTKYNIEFNEESEVWVYGDRKSVR---SAKTVKGAYRIL 71
Query: 156 KILSLI----HQLCLRNIHVTKRDLFYTD----VKLFQDQTQSDAVLDDVACILGCTRSS 207
K+ +I QL L N T R+L+Y F++Q +SD +++D+ + R
Sbjct: 72 KMTYVIGFLKEQLNL-NKSSTLRELYYISEGWGAAKFEEQPESDRLVEDLEILTNFQREH 130
Query: 208 LNVIAAEKGV-VVGRLIFSDNGDM----IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFIL 261
++ E G V+G L + I C +G GG IP N+D++ + DA F++
Sbjct: 131 FHIRPEEDGATVIGPLRVREETRRGVREIHCQDDVGEGGYQIPVNVDKIEFVDHDAKFVI 190
Query: 262 LVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYG 321
+E RL E+ F ++ IIV KGQP +TR LR++ EL LPV+ D DP+
Sbjct: 191 AIETGGMRDRLVENGFDEKYDAIIVHLKGQPARSTRRLLRRLNTELNLPVVVFTDGDPWS 250
Query: 322 LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDL 381
+I + GS ++ S L TP +++GIRP+D+ KY +P +TE+DIK +
Sbjct: 251 YRIFASVAYGSIKSAHLSEYLATPAAQFVGIRPTDIVKYDLPAD---KLTEEDIKALNAI 307
Query: 382 LEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
L D + W +E+NL ++ +K+E QAL+ +G Y+++VYLP +L +
Sbjct: 308 L-TDPRFDSEFWKKEVNLQLEINKKSEQQALAKYGLDYVTDVYLPERLSE 356
>gi|327354903|gb|EGE83760.1| meiosis-specific topoisomerase Spo11 [Ajellomyces dermatitidis ATCC
18188]
Length = 403
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 159/300 (53%), Gaps = 25/300 (8%)
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIA 212
+ ++IL I + + +KRD++Y D F Q+ D +DD+AC +G R++L+V A
Sbjct: 100 VLLRILGHISEAIRGDFVSSKRDIYYLDPVYFGSQSVVDRCIDDIACTIGVDRTALHVAA 159
Query: 213 AEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAM-FILLVEKDAAYIR 271
A KG++VG + N D + + G + P + V + A+ +IL++EK+A + R
Sbjct: 160 AAKGLLVGSFNITLNDDSVVDPGVHSEGMLV-PRAETVRNFDISAVRWILVIEKEATFHR 218
Query: 272 LAEDRFYN---RFPCIIVTAKGQPDVATRLFLRKMK----------MELKLPVLALVDSD 318
LA ++ P I++TAKG PD+ TR FL + + P+ LVDSD
Sbjct: 219 LATANYHKTSAAGPGILITAKGYPDICTRAFLHLLSRTPGSVSGALRSNQPPIFMLVDSD 278
Query: 319 PYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSD----LDKYKIPEQCRLPMTEQD 374
P G+ I+S Y GS+ ++D+ NLT ++WLG++ S+ ++ Y+ + +P+T +D
Sbjct: 279 PDGIAIMSTYKYGSRAQAHDNPNLTVNKMQWLGLQSSEVASRIEVYQQDDDVLIPLTSRD 338
Query: 375 IKTGKDLLEEDFV----KKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
K +D+L V P W EL M+ + KAEI+ L + ++ E +L KLQ
Sbjct: 339 RKKAQDMLSRSPVFAEDGPEPAWRGELQHMLMSNVKAEIEIL--YEREWGIERWLDRKLQ 396
>gi|302681745|ref|XP_003030554.1| hypothetical protein SCHCODRAFT_39718 [Schizophyllum commune H4-8]
gi|300104245|gb|EFI95651.1| hypothetical protein SCHCODRAFT_39718 [Schizophyllum commune H4-8]
Length = 277
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 157/285 (55%), Gaps = 27/285 (9%)
Query: 140 RPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVAC 199
RPFA L +++ + H+ + +I TKRD++Y DV LF Q D ++DD+A
Sbjct: 11 RPFAQL---------FRVMDIAHEAVIDDISSTKRDMYYKDVPLFGTQRVVDNLVDDLAA 61
Query: 200 ILGCTRSSLNVIAAEKGVVVGRL--IFSDNGDMIDCTKMGMGGKAIPPNIDRVG-DMQSD 256
RS LNV A KG+V G I +G+++ G IP VG D+QS
Sbjct: 62 TFEVERSDLNVRATSKGLVCGSSLSIHLRSGEVLQPNDSD--GTLIP-----VGEDIQSF 114
Query: 257 AM-----FILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELK-LP 310
++ ++L+VEKDA + L + P I+ KG PD+ATR ++ + L+ +P
Sbjct: 115 SLVRAISWVLIVEKDAVFQTLYLRSPRSSSPLILSQGKGYPDLATRHLVKTLSDCLQDVP 174
Query: 311 VLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPM 370
+LALVD+D YGL ILSVY GS+++ ++ L ++W+G++ S+L++ + LP
Sbjct: 175 ILALVDADAYGLDILSVYKYGSRSLRHEVGKLAAARMEWMGVKGSELNELGVHADHLLPF 234
Query: 371 TEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSF 415
T+QD K +L + + W +EL+ M+ T++KAEI+ LS+
Sbjct: 235 TKQDEKMALTMLRRPDLPQE--WRKELSRMLFTRRKAEIEVLSNI 277
>gi|261202302|ref|XP_002628365.1| meiosis-specific topoisomerase Spo11 [Ajellomyces dermatitidis
SLH14081]
gi|239590462|gb|EEQ73043.1| meiosis-specific topoisomerase Spo11 [Ajellomyces dermatitidis
SLH14081]
gi|239612183|gb|EEQ89170.1| meiosis-specific topoisomerase Spo11 [Ajellomyces dermatitidis
ER-3]
Length = 395
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 159/300 (53%), Gaps = 33/300 (11%)
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIA 212
+ ++IL I + + +KRD++Y D F Q+ D +DD+AC +G R++L+V A
Sbjct: 100 VLLRILGHISEAIRGDFVSSKRDIYYLDPVYFGSQSVVDRCIDDIACTIGVDRTALHVAA 159
Query: 213 AEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAM-FILLVEKDAAYIR 271
A KG++VG + N D + GM + P + V + A+ +IL++EK+A + R
Sbjct: 160 AAKGLLVGSFNITLNDDSV-----GM----LVPRAETVRNFDISAVRWILVIEKEATFHR 210
Query: 272 LAEDRFYN---RFPCIIVTAKGQPDVATRLFLRKMK----------MELKLPVLALVDSD 318
LA ++ P I++TAKG PD+ TR FL + + P+ LVDSD
Sbjct: 211 LATANYHKTSAAGPGILITAKGYPDICTRAFLHLLSRTPGSVSGALRSNQPPIFMLVDSD 270
Query: 319 PYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSD----LDKYKIPEQCRLPMTEQD 374
P G+ I+S Y GS+ ++D+ NLT ++WLG++ S+ ++ Y+ + +P+T +D
Sbjct: 271 PDGIAIMSTYKYGSRAQAHDNPNLTVNKMQWLGLQSSEVASRIEVYQQDDDVLIPLTSRD 330
Query: 375 IKTGKDLLEEDFV----KKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
K +D+L V P W EL M+ + KAEI+ L + ++ E +L KLQ
Sbjct: 331 RKKAQDMLSRSPVFAEDGPEPAWRGELQHMLMSNVKAEIEIL--YEREWGIERWLDRKLQ 388
>gi|20090444|ref|NP_616519.1| DNA topoisomerase VI subunit A [Methanosarcina acetivorans C2A]
gi|19915459|gb|AAM04999.1| DNA topoisomerase subunit A [Methanosarcina acetivorans C2A]
Length = 393
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 169/335 (50%), Gaps = 21/335 (6%)
Query: 111 SFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILS----LIHQLCL 166
S +PSR +N Y E D V D+ + R S TV+ + +K LI++
Sbjct: 62 SVSLPSRTKANIEYSDESDVWVYGDRESER---SAKTVKGAFQLLKTTYATDFLINEHLA 118
Query: 167 RNIHVTKRDLFYT----DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVV-GR 221
N T R+L+Y D F++Q +SD +++D+ + R ++ E G + G
Sbjct: 119 HNRGSTLRELYYISEGWDYAKFKEQAESDRLIEDLELLTSLQREYFHMRPEEDGATMFGP 178
Query: 222 LIFSD----NGDMIDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDR 276
+ S+ I C K +G GG IP N++ + DA I+ +E Y RL E+
Sbjct: 179 IEISELTKRGARNIHCQKDVGEGGYQIPFNVENIEFKNHDASMIIAIETGGMYARLMENG 238
Query: 277 FYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMS 336
F + I+V KGQP +TR +++M EL++PV D DP+ +I + G+ +
Sbjct: 239 FDEAYNAILVHLKGQPARSTRRIIKRMNEELEIPVAVFTDGDPWSYRIYASVAYGAIKSA 298
Query: 337 YDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEE 396
+ S + TP ++LG++PSD+ +Y++ +TEQDI + L D ++ W E+
Sbjct: 299 HLSEFMATPAARFLGLQPSDIVEYELSTD---KLTEQDISALRSEL-SDPRFESEYWKEQ 354
Query: 397 LNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+ L + +KAE QA + G +++EVYLP +L++
Sbjct: 355 IQLQLDIGKKAEQQAFAGKGLDFVTEVYLPNRLKE 389
>gi|209945792|gb|ACI97127.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 173/327 (52%), Gaps = 21/327 (6%)
Query: 92 TIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKS 151
IE + L++ +++ GN + VP +S N + E R+ ++ + F L
Sbjct: 7 NIERIALELLSNLVHGNA-TLSVPRNSSGN--VISEYRRVSYNNRGSRHSFCVL------ 57
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ +LS +H+L +R T R L+Y + L + Q++ DV +L + SL ++
Sbjct: 58 ---IYMLSRVHRLQVRGGSFTVRGLYYDNPLLVRSQSRIAEARLDVCRMLRTSPLSLGIL 114
Query: 212 AAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYI 270
AA KG+V G L + NGD++D + G G +P + +++ +++ A F+L+VEK++ +
Sbjct: 115 AASKGLVAGDLRLLMTNGDVLDSSLYG-GPLTLPTDPEKIDRIETLAEFVLIVEKESVFE 173
Query: 271 RLAEDRFYNRFP--CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVY 328
L + F I++T KG PD TR + ++ E +L LVD+DP+G++I+ VY
Sbjct: 174 SLLSRNVFGTFERRFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVY 233
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVK 388
GSK+MS+ S LTTP ++W+G+ PS++ + + D K DLL ++
Sbjct: 234 RHGSKSMSFSSQGLTTPALRWIGLHPSEIPALGTGA---VALVAGDNKKINDLLARHDLE 290
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSF 415
PG +EL ++ + K EI+++ F
Sbjct: 291 --PGVRQELRMLQDVQLKVEIESVIDF 315
>gi|435850856|ref|YP_007312442.1| DNA topoisomerase VI, subunit A [Methanomethylovorans hollandica
DSM 15978]
gi|433661486|gb|AGB48912.1| DNA topoisomerase VI, subunit A [Methanomethylovorans hollandica
DSM 15978]
Length = 369
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 176/346 (50%), Gaps = 25/346 (7%)
Query: 100 IARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVR------KSTI 153
I + L G S +P+R N Y E + V D+ + R S TV+ KS
Sbjct: 27 IYKQFLDGEVPSVSLPTRTKKNIEYNDESEVWVYGDRESER---SAKTVKGAFQLLKSVH 83
Query: 154 TVKILSLIHQLCLRNIHVTKRDLFYT----DVKLFQDQTQSDAVLDDVACILGCTRSSLN 209
TV L I +N T R+L+Y D+ F++Q +SD +++D+ I G R +
Sbjct: 84 TVDFL--IKNHLSQNRGSTLRELYYISENWDIAKFREQPESDRLIEDLEIITGLQREYFH 141
Query: 210 VIAAEKGVVV-GRLIFSDN---GD-MIDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLV 263
+ E G + G + ++ GD I C + +G G IP N++ + + DA FI+ +
Sbjct: 142 MRPEEDGATMFGPIRIREDTKRGDRTIHCQEDIGESGYQIPFNVENIEFLDHDADFIIAI 201
Query: 264 EKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLK 323
E Y RL E+ F ++ I+V KGQP +TR +++M EL LPV+ D DP+ +
Sbjct: 202 ETGGMYARLIENGFDEKYNAILVHLKGQPARSTRRIIKRMNEELSLPVVVFTDGDPWSYR 261
Query: 324 ILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLE 383
I + G+ ++ S ++ TP ++G++PSD+ +Y++ +TE+D+ + L
Sbjct: 262 IFASVAYGAIKSAHLSEHMATPGAMFIGVQPSDIVEYELSTD---KLTEKDVGALRSELS 318
Query: 384 EDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
+ + W E++NL ++ +KAE QA + G ++++ YLP +L
Sbjct: 319 DPRFATDY-WKEQINLQLEINKKAEQQAFAGKGLDFVTDRYLPDRL 363
>gi|313126398|ref|YP_004036668.1| DNA topoisomerase vi subunit a [Halogeometricum borinquense DSM
11551]
gi|448286242|ref|ZP_21477476.1| DNA topoisomerase VI subunit A [Halogeometricum borinquense DSM
11551]
gi|312292763|gb|ADQ67223.1| DNA topoisomerase VI, subunit A [Halogeometricum borinquense DSM
11551]
gi|445575075|gb|ELY29557.1| DNA topoisomerase VI subunit A [Halogeometricum borinquense DSM
11551]
Length = 364
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 175/354 (49%), Gaps = 18/354 (5%)
Query: 89 VQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTV 148
Q + L ++ G+ +P+R SN ++ + + V D+ + R S+
Sbjct: 10 AQERLIDLAVEFYDQFAEGDIPHMDIPTRTKSNIVFDEDSNVWVYGDRKSTRSANSVRGA 69
Query: 149 RKS-TITVKILSLIHQLCLRNIHVTKRDLFY------TDVKLFQDQTQSDAVLDDVACIL 201
RK T I L++QL T R+L+Y T+ F DQ +S+ +++D+ +
Sbjct: 70 RKLLKATYAIEFLVNQLE-EGRSSTLRELYYLSESWDTEEAQFNDQDESNQLIEDLEIVS 128
Query: 202 GCTRSSLNVIAAEKGV-VVGRLIFSDN---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQS 255
TR ++ E G ++G L + G+ I C + +G GG IP N D + +
Sbjct: 129 NVTREDFHMRPEESGATLMGPLELREQTRRGEREIHCQEDVGEGGYQIPNNPDTIEFLDH 188
Query: 256 DAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 315
D F+L VE RL E+ F + C++V KGQP ATR +++ EL LPV+
Sbjct: 189 DIDFVLCVETGGMRDRLIENGFDEEYGCLVVHLKGQPARATRRITKRLHDELDLPVMVFT 248
Query: 316 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 375
D DP+ +I GS ++ S L TP+ +++GI+P D+ Y +P P+++ DI
Sbjct: 249 DGDPWSYRIYGSVAYGSIKSAHLSEYLATPEARFVGIQPQDIVDYDLPTD---PLSDSDI 305
Query: 376 KTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
+ LE+ + W E++ L + ++KAE QAL+S G ++++ YLP +L
Sbjct: 306 NALESELEDPRFMTDY-WEEQIELQLDIEKKAEQQALASRGLDFVTDTYLPERL 358
>gi|409044860|gb|EKM54341.1| hypothetical protein PHACADRAFT_96783, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 390
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 159/289 (55%), Gaps = 25/289 (8%)
Query: 143 ASLSTVRKSTITVKILSLIHQLCLRNIHVTKR--DLFYTDVKLFQDQTQSDAVLDDVACI 200
A S+ R ++ + L+H+ + + TKR D++Y DV LF Q D ++DD+A
Sbjct: 57 AKHSSSRAIAQVLRTVELMHEALVTGVPTTKRLVDMYYKDVPLFGSQVVVDKLVDDIAAT 116
Query: 201 LGCTRSSLNVIAAEKGVVVGR----LIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSD 256
L R+ LNV A+ KG+V GR ++ ++ + ++ + + I+R +++ D
Sbjct: 117 LSVGRADLNVRASSKGLVSGRGLTMHLYEEDSITVSTSESTL--IPVSEEIERF-EVEDD 173
Query: 257 AMFILLVEKDAAY-----IRLAEDRFYNRFPC--IIVTAKGQPDVATRLFLRKMKMEL-- 307
++L+VEK+A + + LAE ++R P +++T KG PDVATR +R + L
Sbjct: 174 LSWVLVVEKEAVFQTLCRLNLAE---HSRLPGPGLLITGKGYPDVATRQLVRTLSDNLPA 230
Query: 308 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR 367
+P+++LVD DP+G+ ILSVY GS +M ++ +L I W G+R D+ + +
Sbjct: 231 AVPIISLVDCDPWGIDILSVYKYGSASMVHEHKSLVASRIVWGGVRGEDISLLGLNKDAM 290
Query: 368 LPMTEQDIKTGKDLLEEDFVKKNPG-WVEELNLMVKTKQKAEIQALSSF 415
LP+T+ D K +L + PG W EL M+ +++KAEI+ LSS
Sbjct: 291 LPITKHDQKKAMAILRRTDL---PGEWKTELQHMLHSRRKAEIEVLSSM 336
>gi|226287116|gb|EEH42629.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 389
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 167/331 (50%), Gaps = 39/331 (11%)
Query: 137 TTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDD 196
T P ++ + I ++I+ I + N +KRD++Y D F Q+ D +DD
Sbjct: 60 TYFWPGKTVQEGWRFAILLRIMGHISEAIHGNFISSKRDIYYLDPVYFGSQSVVDRCIDD 119
Query: 197 VACILGCTRSSLNV-----------IAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIP 244
+AC +G RS+L+V AA KG+ VGR + ++ ID G +P
Sbjct: 120 LACTIGVDRSALHVELFSLIDSQYQAAAAKGLAVGRFNVTLNDNSTIDADLHAEVGMLVP 179
Query: 245 PNIDRVGDMQSDAM-FILLVEKDAAYIRLAEDRFYNR---FPCIIVTAKGQPDVATRLFL 300
++ V ++ A+ +IL++EK+A + RLA ++ P I++T KG PD+ TR FL
Sbjct: 180 -RVETVKNVDLSAVRWILVIEKEATFRRLATVNYHKTSAAGPGIMITGKGYPDLCTRAFL 238
Query: 301 RKMKMELKLP------------VLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIK 348
R + L LP + VDSDP G+ I+S Y GS+ ++++ NLT DI+
Sbjct: 239 RLLSHTLPLPSVLGTLPSSPPPIYMFVDSDPDGMAIMSTYKYGSRAQAHENNNLTVSDIQ 298
Query: 349 WLGIRPSD----LDKYKIPEQCRLPMTEQDIKTGKDLLEEDFV----KKNPGWVEELNLM 400
W G+R S+ LD + + +P+T +D K +D+L + V P W EL M
Sbjct: 299 WFGLRSSEVVSRLDAHIQDDDVLIPLTLRDRKKAQDMLARNPVFAEDGPEPTWRAELQHM 358
Query: 401 VKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+ + KAEI+ L + + E +L LKL++
Sbjct: 359 LMSNVKAEIEVL--YEREEGVERWLDLKLRK 387
>gi|392865657|gb|EAS31463.2| meiotic recombination protein spo11 [Coccidioides immitis RS]
Length = 383
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 150/290 (51%), Gaps = 23/290 (7%)
Query: 141 PFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACI 200
P +++ K + ++IL I + +KRD++Y D F Q D +DD+A
Sbjct: 82 PGKTVTDAWKFGVIMRILGHISEAIEGKFISSKRDIYYLDPAYFGSQRLVDGYIDDIAYT 141
Query: 201 LGCTRSSLNVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMF 259
+G R++L+V AA KG+ VGR I NG ++ + G G IP + VG S +
Sbjct: 142 VGVDRAALHVSAAAKGLTVGRYKINLQNGSVLKVGEHGEG-ILIPRAHEIVGFDLSGVRW 200
Query: 260 ILLVEKDAAYIRLAEDRFYNRFPC---IIVTAKGQPDVATRLFLRKMKMELK------LP 310
IL++EK+A + RLA ++ I++T KG PD++TR FLR + E + +P
Sbjct: 201 ILIIEKEAVFHRLATSNYHATSAAGGGILITGKGYPDLSTRAFLRSIS-EWRNSPARFIP 259
Query: 311 VLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR--- 367
+ LVD DP G+ I+S Y GS + S+++ANL P ++WLG+R SD IP
Sbjct: 260 IYVLVDCDPDGMAIMSTYKYGSISQSHENANLNVPGVEWLGLRASDT---AIPGNADVDR 316
Query: 368 --LPMTEQDIKTGKDLLEEDFV---KKNPGWVEELNLMVKTKQKAEIQAL 412
+PMT +D + +L + ++ W EL M+ KAEI+ L
Sbjct: 317 PLIPMTLRDRTRAQAMLSHSVIFSDEREQEWRLELQRMLMVNAKAEIEVL 366
>gi|209945768|gb|ACI97115.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 173/327 (52%), Gaps = 21/327 (6%)
Query: 92 TIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKS 151
IE + L++ +++ GN + VP +S N + E R+ ++ + F L
Sbjct: 7 NIERIALELLSNLVHGNA-TLSVPRNSSGN--VISEYRRVSYNNRGSRHSFCVL------ 57
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ +LS +H+L +R T R L+Y + L + Q++ DV +L + SL ++
Sbjct: 58 ---IYMLSRVHRLQVRGGSFTVRGLYYDNPLLVRSQSRIAEARLDVCRMLRTSPLSLGIL 114
Query: 212 AAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYI 270
AA KG+V G L + NGD++D + G G +P + +++ +++ A F+L+VEK++
Sbjct: 115 AASKGLVAGDLRLLMTNGDVLDSSLYG-GPLTLPTDPEKIDRIETLAEFVLIVEKESXXE 173
Query: 271 RLAEDRFYNRFP--CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVY 328
L + F I++T KG PD TR + ++ E +L LVD+DP+G++I+ VY
Sbjct: 174 SLLSRNVFGTFERRFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVY 233
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVK 388
GSK+MS+ S LTTP ++W+G+ PS++ + + D K DLL ++
Sbjct: 234 RHGSKSMSFSSQGLTTPALRWIGLHPSEIPALGTGA---VALVAGDNKKINDLLARHDLE 290
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSF 415
PG +EL ++ + KAEI+++ F
Sbjct: 291 --PGVRQELRMLQDVQLKAEIESVIDF 315
>gi|328769561|gb|EGF79605.1| hypothetical protein BATDEDRAFT_26068 [Batrachochytrium
dendrobatidis JAM81]
Length = 423
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 176/392 (44%), Gaps = 58/392 (14%)
Query: 78 CREVTDLSLSAVQSTIETLILQIA---RSILAGNGFSFQVPSRASSNQLYVPELDRIVLK 134
C+ + + + + T+ +++ + +++L + FS ++ + ++P L +
Sbjct: 25 CKSLQPCANTTISPTLSVMLIPVTPPTKTLLVKHIFSILESIQSVMGRNHIPALQLVCRY 84
Query: 135 DKTTLRPFASLSTVRKST-----------------ITVKILSLIHQLCLRNIHVTKRDLF 177
TT F ++V + V IL IH L TKRD++
Sbjct: 85 KSTTFDSFTGKNSVDSANPKYKLIKRIGRSISTFDAIVSILKCIHSLLFTQSRCTKRDIY 144
Query: 178 YTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRL-IFSDNGDMIDCTKM 236
Y ++ F+ Q Q D +++D+AC G +R L ++AA KGVV GRL I + GD++DC
Sbjct: 145 YRNIHQFRTQKQVDEIVEDLACSFGISRDQLMIVAASKGVVYGRLWIHTSKGDILDCCSN 204
Query: 237 GMGGKAIPPNIDRVGDMQSDAM-FILLVEKDAAYIRLAEDRFYNRFPCII-VTAKGQPDV 294
G IP +G D + +L+VEKDA + + + F++ P II +T +G PD+
Sbjct: 205 TTSGTLIPNADTIIGFTVGDGVTTVLVVEKDAVFFSMLQYGFWHTHPHIILITGRGFPDM 264
Query: 295 ATRL------------------------FLRKMKMELK---------LPVLALVDSDPYG 321
ATR F R ++EL L VL LVD DP G
Sbjct: 265 ATRRLVCMLSQSRMYRINPRTMSDFEVEFGRSTEIELGQVLTTTESDLMVLVLVDGDPSG 324
Query: 322 LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDL 381
+I Y GSK+M+Y++ L P W+GI P+ I +P+T D L
Sbjct: 325 FEIYCTYKFGSKSMAYNTL-LACPSSIWVGIHPTSW-MLTIDADSLIPLTPHDRCKVYRL 382
Query: 382 LEEDFVKKNPGWVEELNLMVKTKQKAEIQALS 413
L+ + ++ + +L+ MV K EIQ S
Sbjct: 383 LDRNHIRSCKEYQRQLSRMVFMNCKCEIQEFS 414
>gi|386000804|ref|YP_005919103.1| Type 2 DNA topoisomerase 6 subunit A [Methanosaeta harundinacea
6Ac]
gi|357208860|gb|AET63480.1| Type 2 DNA topoisomerase 6 subunit A [Methanosaeta harundinacea
6Ac]
Length = 360
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 178/353 (50%), Gaps = 27/353 (7%)
Query: 94 ETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTI 153
ETL Q R + +PSR +N Y E + V D+ ++R S+ TVR +
Sbjct: 16 ETLYDQFQRGTVP----HLALPSRTKNNLEYDQEGEIWVYGDQESVR---SVKTVRGAKS 68
Query: 154 TVK----ILSLIHQLCLRNIHVTKRDLFYT----DVKLFQDQTQSDAVLDDVACILGCTR 205
+K I LI++ +N T R+++Y DV F +Q +SD +++D+ + R
Sbjct: 69 LLKTTYLIELLINEHLRQNRGSTLREIYYISENWDVAKFGEQAESDRLVEDLEILTALLR 128
Query: 206 SSLNVIAAEKGVVV-GRLIFSDN---GD-MIDCTK-MGMGGKAIPPNIDRVGDMQSDAMF 259
+V E G V G L S+ G+ I C + +G G IP N+D V + DA F
Sbjct: 129 EDFHVRPEEDGATVFGPLTISEKTRRGERTIHCQEDVGEAGYQIPFNVDNVEFKEHDAKF 188
Query: 260 ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDP 319
++ +E + RL E+ F I+V KGQP +TR ++++ EL LPV+ D DP
Sbjct: 189 VIAIETGGMHARLIENGFDQEHDAILVHLKGQPARSTRRLIKRLNEELSLPVVIFTDGDP 248
Query: 320 YGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGK 379
+ +I + G+ +Y S L TP +++G++P+D+ Y + +T+QD++ +
Sbjct: 249 WSYRIYASVAYGAIKSAYLSDYLVTPAAQFVGVQPTDIVNYDLSTD---KLTDQDLQALR 305
Query: 380 -DLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+L + F W E++ L +K +KAE QA + G ++++ YLP +L +
Sbjct: 306 SELADPRFATDY--WKEQIQLQIKLSKKAEQQAFAGKGLDFVTKTYLPERLSE 356
>gi|336476700|ref|YP_004615841.1| DNA topoisomerase [Methanosalsum zhilinae DSM 4017]
gi|335930081|gb|AEH60622.1| DNA topoisomerase (ATP-hydrolyzing) [Methanosalsum zhilinae DSM
4017]
Length = 373
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 171/332 (51%), Gaps = 25/332 (7%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVR------KSTITVKILSLIHQLCLR 167
+PSR N Y D V D+ + R S TV+ K+T TV L H +
Sbjct: 43 MPSRTKKNIEYDEGSDVWVYGDRESER---SAKTVKGAFQLLKTTHTVDFLLKNH--LSQ 97
Query: 168 NIHVTKRDLFYT----DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVV-GRL 222
N T R+L+Y DV F++Q +SD +++D+ I G R ++ E G + G +
Sbjct: 98 NRGSTLRELYYISENWDVAKFREQPESDRLIEDLEIITGLQREYFHMRPEEDGATMFGPI 157
Query: 223 IFSDNGD----MIDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRF 277
+ +I C + +G G IP N++ + + DA FI+ +E Y RL E+ F
Sbjct: 158 KIHEETKRGTRIIHCQEDIGESGYQIPFNVENINFLDHDADFIIAIETGGMYARLIENGF 217
Query: 278 YNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSY 337
++ I+V KGQP +TR +++M EL +PV D DP+ +I + G+ ++
Sbjct: 218 DEKYNAILVHLKGQPARSTRRLIKRMNDELGIPVAVFTDGDPWSYRIYASIAYGAIKSAH 277
Query: 338 DSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEEL 397
S + TP K++G++PSD+ +Y++ +TE+DI + L + + + W E++
Sbjct: 278 LSEFMATPSAKFVGVQPSDIVEYELSTD---KLTEKDISALRSELSDPRFETDY-WKEQI 333
Query: 398 NLMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
NL ++ ++KAE QA + G ++++VYLP +L
Sbjct: 334 NLQLEIQKKAEQQAFAGKGLDFVTDVYLPERL 365
>gi|448491669|ref|ZP_21608509.1| DNA topoisomerase VI subunit A [Halorubrum californiensis DSM
19288]
gi|445692669|gb|ELZ44840.1| DNA topoisomerase VI subunit A [Halorubrum californiensis DSM
19288]
Length = 361
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 165/338 (48%), Gaps = 16/338 (4%)
Query: 106 AGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLC 165
AG+ +P+R SN Y E D+T+ R S+ RK + +
Sbjct: 24 AGSIPEMTLPTRTKSNIEYDEESGVWTYGDRTSTRSANSVRGARKLLKAAYTIEFLANQL 83
Query: 166 LRNIHVTKRDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-V 218
+ T R+L+Y D F+ Q +S+ +++D+ + G TR ++ E G V
Sbjct: 84 DDDRSSTLRELYYLSESWDNDEAQFKSQDESNDLVEDLEIVTGVTREDFHMRPEESGAKV 143
Query: 219 VGRLIFSDNGDM----IDCT-KMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
+G L+ + + I C +G GG IP N D + + +DA F+L VE RL
Sbjct: 144 MGPLLLREQTNRGEREIHCQLDVGQGGYQIPNNPDTIEFLDNDAEFVLCVETGGMRDRLV 203
Query: 274 EDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSK 333
E+ F ++V GQP ATR ++ + EL LPV+ D DP+ +I GS
Sbjct: 204 ENGFDEAHDALVVHLGGQPARATRRLTKRFRDELDLPVVVFTDGDPWSYRIYGSVAYGSI 263
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
++ S L TP+ +++GI+P D+ +Y +P P+++ DI + LE+ + + W
Sbjct: 264 KSAHLSKYLATPEARFIGIQPEDIVEYDLPSD---PLSDSDINALESELEDPRFQTDY-W 319
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
E++ L + +K+E Q+L+S G ++++ YLP +L +
Sbjct: 320 EEQIELQLDIGKKSEQQSLASRGLDFVTDTYLPERLGE 357
>gi|225426144|ref|XP_002272935.1| PREDICTED: endoglucanase-like [Vitis vinifera]
Length = 753
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 149/251 (59%), Gaps = 18/251 (7%)
Query: 196 DVACILGCTRSSLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVGDM- 253
DV +L C+R SL ++A+ +G V GRL+ + N + +DC+ G G AI +++ + M
Sbjct: 510 DVVALLRCSRYSLGIMASSRGAVTGRLLLQEPNQETVDCSACGSSGHAISGDMNLLERMV 569
Query: 254 -QSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPV 311
++DA +I++VEK A + RLAEDR +N+ P I++TAKG PD+ATR L +M LP+
Sbjct: 570 MKTDARYIIVVEKHAIFQRLAEDRVFNQIPSILITAKGYPDIATRFLLYRMSRAFPDLPI 629
Query: 312 LALVDSDPYGLKILSVYGCGSKNMSYDS----ANLTTPDIKWLGIRPSDLD---KYKIPE 364
LALVD +P GL IL + GS M ++ A L +PD K L +L+ I
Sbjct: 630 LALVDWNPAGLAILCTFKFGSIGMGLEAYRYGAFLLSPD-KILTFAVLELNIKMPIDISP 688
Query: 365 QCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVY 424
+LP +D++ K L + +++N + EL +MV++ ++AEI+AL G+ +L + Y
Sbjct: 689 NIQLP---RDLQIAKSLKSSEILEEN--YRNELEVMVQSGRRAEIEALYFRGYNFLGK-Y 742
Query: 425 LPLKLQQKDWL 435
+ K+ Q +++
Sbjct: 743 IAKKIVQANYV 753
>gi|448502260|ref|ZP_21612533.1| DNA topoisomerase VI subunit A [Halorubrum coriense DSM 10284]
gi|445694416|gb|ELZ46545.1| DNA topoisomerase VI subunit A [Halorubrum coriense DSM 10284]
Length = 361
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 165/338 (48%), Gaps = 16/338 (4%)
Query: 106 AGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLC 165
AG+ +P+R SN Y E D+T+ R S+ RK + +
Sbjct: 24 AGSIPEMTLPTRTKSNIEYDEESGVWTYGDRTSTRSANSVRGARKLLKAAYTIEFLANQL 83
Query: 166 LRNIHVTKRDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-V 218
+ T R+L+Y D F Q +S+ +++D+ + G TR ++ E G V
Sbjct: 84 DDDRSSTLRELYYLSESWNNDEAQFSSQDESNDLVEDLEIVTGVTREDFHMRPEESGAKV 143
Query: 219 VGRLIF---SDNGDM-IDCT-KMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
+G L ++ GD I C +G GG IP N D + + +DA F+L VE RL
Sbjct: 144 MGPLELREQTNRGDREIHCQLDVGQGGYQIPNNPDTIEFLDNDAEFVLCVETGGMRDRLV 203
Query: 274 EDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSK 333
E+ F ++V GQP ATR ++ + EL LPV+ D DP+ +I GS
Sbjct: 204 ENGFDEEHDALVVHLGGQPARATRRLTKRFRDELDLPVVVFTDGDPWSYRIYGSVAYGSI 263
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
++ S L TP+ +++GI+P D+ +Y +P P+++ DI + LE+ + + W
Sbjct: 264 KSAHLSKYLATPEARFIGIQPEDIVEYDLPSD---PLSDSDINALESELEDPRFQTDY-W 319
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
E++ L + +K+E Q+L+S G ++++ YLP +L +
Sbjct: 320 EEQIELQLDIGKKSEQQSLASRGLDFVTDTYLPERLGE 357
>gi|448591217|ref|ZP_21650896.1| DNA topoisomerase VI subunit A [Haloferax elongans ATCC BAA-1513]
gi|445733773|gb|ELZ85338.1| DNA topoisomerase VI subunit A [Haloferax elongans ATCC BAA-1513]
Length = 366
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 165/330 (50%), Gaps = 16/330 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
+P+R SN Y + + V D+T+ R S+ RK + + + + T
Sbjct: 37 LPTRTKSNIEYDEDSNVWVYGDRTSTRSANSVRGARKLLKAAYTIEFLARQLEEDRSSTL 96
Query: 174 RDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y + F DQ +S+ +++D+ + TR ++ E G ++G L +
Sbjct: 97 RELYYLSESWDAEEAHFSDQDESNQLIEDLEIVSEVTREDFHMRPEESGATLMGPLELRE 156
Query: 227 N---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
G+ I C K +G GG IP N D + + D F++ VE RL E+ F + +
Sbjct: 157 QTRRGEREIHCQKDVGEGGYQIPNNPDTIEFLDHDIDFVMCVETGGMRDRLIENGFDDDY 216
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
+IV KGQP ATR ++++ EL LPV+ D DP+ +I GS ++ S
Sbjct: 217 NALIVHLKGQPARATRRITKRLRNELDLPVVVFTDGDPWSYRIFGSVAYGSIKSAHLSEY 276
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TPD +++GI+P D+ Y +P P+++ DI + LE+ + W E++ L +
Sbjct: 277 LATPDARFVGIQPQDIVDYDLPTD---PLSDSDINALESELEDPRFMSDY-WTEQIELQL 332
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+KAE QAL++ G ++++ YLP +L +
Sbjct: 333 DIGKKAEQQALAARGLDFVTDEYLPTRLDE 362
>gi|448720888|ref|ZP_21703482.1| DNA topoisomerase VI subunit A [Halobiforma nitratireducens JCM
10879]
gi|445780501|gb|EMA31383.1| DNA topoisomerase VI subunit A [Halobiforma nitratireducens JCM
10879]
Length = 363
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 168/333 (50%), Gaps = 22/333 (6%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
VP+R +N Y E + V D+ + R S+ RK V + + + T
Sbjct: 34 VPTRTKNNIEYDEESNVWVYGDRESTRSANSVRGARKLLKAVYTIDFLADQLDEDRSSTL 93
Query: 174 RDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y + F Q +S+++++D+ + G TR ++ E G ++G L +
Sbjct: 94 RELYYLSESWDNEEAQFTSQDESNSLIEDLEIVSGVTREDFHMRPEESGATIMGPLYLRE 153
Query: 227 N---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
G+ I C + +G GG IP N D + + DA FIL VE RL E+ F +
Sbjct: 154 QTRRGEREIHCQEDVGEGGYQIPNNPDTIDFLDCDADFILAVETGGMRDRLVENGFDEEY 213
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
++V KGQP ATR +++ EL LPV D DP+ +I GS ++ S
Sbjct: 214 NALVVHLKGQPARATRRITKRLHDELDLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEY 273
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVK---KNPGWVEELN 398
L TP+ +++GI+P+D+ +Y++P P+++ D K+ LE + + W E++
Sbjct: 274 LATPEAQFIGIQPADIVEYELPTD---PLSDSD----KNALESELSDPRFQTDYWEEQIE 326
Query: 399 LMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
L ++ ++K+E Q+L+S G ++++ YLP +L +
Sbjct: 327 LQLEIEKKSEQQSLASRGLDFVTDTYLPERLDE 359
>gi|327401250|ref|YP_004342089.1| Type 2 DNA topoisomerase 6 subunit A [Archaeoglobus veneficus SNP6]
gi|327316758|gb|AEA47374.1| Type 2 DNA topoisomerase 6 subunit A [Archaeoglobus veneficus SNP6]
Length = 380
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 173/334 (51%), Gaps = 20/334 (5%)
Query: 111 SFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVK---ILSLIHQLCLR 167
++ +R N Y + + V D+ ++R S TV+ + + ++ ++ + +
Sbjct: 50 ELKIATRTKYNIEYNEDSEVWVYGDRRSVR---SAKTVKGAYMLLRMAYVIGFLKEQLNA 106
Query: 168 NIHVTKRDLFYTD----VKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRL 222
N T R+L+Y + F +Q +SD +++D+ + R ++ E G V+G L
Sbjct: 107 NKSSTLRELYYISENWGMAKFNEQQESDRLVEDLEILTAFQREHFHIRPEEDGATVIGPL 166
Query: 223 IFSDNGDM----IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRF 277
+ I C +G GG IP N+D++ + DA F++ +E RL E+ F
Sbjct: 167 RIREETRRGMREIHCQDDVGEGGYQIPVNVDKIEFVDHDAKFVIAIETGGMRDRLVENGF 226
Query: 278 YNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSY 337
+F IIV KGQP +TR LR++ EL LPV+ D DP+ +I + GS ++
Sbjct: 227 DEKFDAIIVHLKGQPARSTRRLLRRLNTELGLPVVVFTDGDPWSYRIYASVAYGSIKSAH 286
Query: 338 DSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEEL 397
S L TP K++GIRPSD+ KY++P +T+QDIK +L +D W +E+
Sbjct: 287 LSEYLATPAAKFVGIRPSDIVKYELPSD---KLTDQDIKALNAIL-QDPRFNTEFWKKEV 342
Query: 398 NLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
L ++ +K+E QAL+ +G Y+++VYLP +L +
Sbjct: 343 TLQLELGKKSEQQALAKYGLDYVTDVYLPERLTE 376
>gi|448562314|ref|ZP_21635353.1| DNA topoisomerase VI subunit A [Haloferax prahovense DSM 18310]
gi|448585464|ref|ZP_21647857.1| DNA topoisomerase VI subunit A [Haloferax gibbonsii ATCC 33959]
gi|445719518|gb|ELZ71198.1| DNA topoisomerase VI subunit A [Haloferax prahovense DSM 18310]
gi|445726164|gb|ELZ77781.1| DNA topoisomerase VI subunit A [Haloferax gibbonsii ATCC 33959]
Length = 366
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 164/338 (48%), Gaps = 16/338 (4%)
Query: 106 AGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLC 165
AG +P+R SN Y + V D+T+ R S+ RK + + +
Sbjct: 29 AGEIPHMTLPTRTKSNIEYDENSNVWVYGDRTSTRSANSVRGARKLLKAAYTIEFLARQL 88
Query: 166 LRNIHVTKRDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-V 218
+ T R+L+Y + F DQ +S+ +++D+ + TR ++ E G +
Sbjct: 89 EEDRSSTLRELYYISESWDAEEAHFSDQDESNQLIEDLEIVSEVTREDFHMRPEESGATL 148
Query: 219 VGRLIFSDN---GDM-IDCT-KMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
+G L + G+ I C +G GG IP N D + + D F+L VE RL
Sbjct: 149 MGPLELREQTRRGERDIHCQLDVGEGGYQIPNNPDTIEFLDHDIDFVLCVETGGMRDRLV 208
Query: 274 EDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSK 333
E+ F + + +IV KGQP ATR +++ EL LPV+ D DP+ +I GS
Sbjct: 209 ENGFDDEYNVLIVHLKGQPARATRRITKRLHNELDLPVVVFTDGDPWSYRIFGSVAYGSI 268
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
++ S +L TP+ +++GI+P D+ Y +P P+ + DI + LE+ + W
Sbjct: 269 KSAHLSEHLATPEARFVGIQPQDIVDYDLPTD---PLADSDINALQSELEDPRFMSD-YW 324
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
E++ L + +KAE QAL+S G ++++ YLP +L +
Sbjct: 325 TEQIELQLDIGKKAEQQALASRGLDFVTDEYLPTRLDE 362
>gi|335433682|ref|ZP_08558500.1| DNA topoisomerase VI subunit A [Halorhabdus tiamatea SARL4B]
gi|334898485|gb|EGM36591.1| DNA topoisomerase VI subunit A [Halorhabdus tiamatea SARL4B]
Length = 370
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 174/370 (47%), Gaps = 16/370 (4%)
Query: 74 LSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVL 133
+S E D S + + L Q G+ VP+R +N Y PE V
Sbjct: 1 MSTDTGETADGSDGDARERLIELAAQFYDQFERGDVPHMDVPTRTKTNIEYDPEQKVWVY 60
Query: 134 KDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYT------DVKLFQDQ 187
D+ + R S+ +K + + + + T R+L+Y D F Q
Sbjct: 61 GDRKSTRSANSVRGAQKLLKVIYSIDFLANQLEEDRSSTLRELYYLSESWDLDEAQFNSQ 120
Query: 188 TQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIF---SDNGDM-IDCTK-MGMGGK 241
+S+ +++D+ + R ++ E G V+G L ++ GD I C +G GG
Sbjct: 121 DESNQLIEDLEIVSDVRREEFHMRPEESGAKVMGPLRLREQTNRGDREIHCQDDVGQGGY 180
Query: 242 AIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLR 301
IP + D + + +DA F+L VE RL E+ F + + ++V GQP ATR +
Sbjct: 181 QIPNDPDTIDFLDNDADFVLCVETGGMRDRLVENGFDDEYNALVVHLGGQPARATRRLTK 240
Query: 302 KMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYK 361
++ EL LPV D DP+ +I GS ++ S L TP+ +++G++P D+ +Y
Sbjct: 241 RLHDELDLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSKYLATPEAQFIGVQPEDIVEYD 300
Query: 362 IPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLS 421
+P P+ + D+ + LE+ + + W E++ L + +K+E QAL+S+G +++
Sbjct: 301 LPTD---PLADSDVNALESELEDPRFQTDY-WEEQIELQLDIDKKSEQQALASYGLDFVT 356
Query: 422 EVYLPLKLQQ 431
+ YLP +L +
Sbjct: 357 DTYLPERLDE 366
>gi|298713147|emb|CBJ26903.1| Sporulation-specific protein 11 homologue [Ectocarpus siliculosus]
Length = 330
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 148/286 (51%), Gaps = 22/286 (7%)
Query: 172 TKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNG--D 229
T+R+++YT VK F +QT+ + + D +LG R L ++A+ +G + GR+ G D
Sbjct: 15 TQREIYYTFVKHFANQTKCNDAILDCCSLLGEPRHCLGIVASSRGYLAGRISIRGEGFED 74
Query: 230 MIDC-TKMGMGGKAIPPN-IDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNR------- 280
D + G G AI + + R +++SDA +L+VEKD + R+ ED FY+R
Sbjct: 75 WQDPRSTGGSSGLAITSDWLTRPLELKSDARIVLVVEKDGVFNRMVEDGFYDRANVSTLH 134
Query: 281 ----FPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMS 336
P ++VT +G P +A R + ++ L LPVL LVD +P+GL + Y GS
Sbjct: 135 YLRRIPSVLVTGQGFPPLAVRACVYRLAEALDLPVLGLVDCNPFGLSVFLQYKEGSSRQG 194
Query: 337 YDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPG-WVE 395
SA P++KW+G+RPS LD +P++ +++QD+ + + V NP + E
Sbjct: 195 RGSAKFGVPEMKWVGLRPSQLDDLDLPDEVHQTLSQQDLSRAQSVANSTLVTDNPDTYGE 254
Query: 396 ELNLMVKTKQKAE------IQALSSFGFQYLSEVYLPLKLQQKDWL 435
E+ + T+ + I +S G L V+ L ++Q +L
Sbjct: 255 EVEYWLDTENPGKGKGCERISPNTSIGKGDLPIVWPSLAIEQSMYL 300
>gi|448529391|ref|ZP_21620529.1| DNA topoisomerase VI subunit A [Halorubrum hochstenium ATCC 700873]
gi|445709153|gb|ELZ60986.1| DNA topoisomerase VI subunit A [Halorubrum hochstenium ATCC 700873]
Length = 361
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 163/330 (49%), Gaps = 16/330 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
+P+R SN Y E D+T+ R S+ RK + + + T
Sbjct: 32 LPTRTKSNIEYDEESGVWTYGDRTSTRSANSVRGARKLLKAAYTIEFLADQLDDDRSSTL 91
Query: 174 RDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIF-- 224
R+L+Y D F+ Q +S+ +++D+ + G TR ++ E G V+G L
Sbjct: 92 RELYYLSESWDNDEAQFKSQDESNDLVEDLEIVTGVTREDFHMRPEESGAKVMGPLEIRE 151
Query: 225 -SDNGDM-IDCT-KMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
++ GD I C +G GG IP N D + + +DA F+L VE RL E+ F
Sbjct: 152 QTNRGDREIHCQLDVGQGGYQIPNNPDTIEFLDNDAEFVLCVETGGMRDRLVENGFDEAH 211
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
++V GQP ATR ++ + EL LPV+ D DP+ +I GS ++ S
Sbjct: 212 DALVVHLGGQPARATRRLTKRFRDELDLPVVVFTDGDPWSYRIYGSVAYGSIKSAHLSKY 271
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ +++GI+P D+ +Y +P P+++ DI + LE+ + + W E++ L +
Sbjct: 272 LATPEARFIGIQPEDIVEYDLPSD---PLSDSDINALESELEDPRFQTDY-WEEQIELQL 327
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+K+E Q+L+S G ++++ YLP +L +
Sbjct: 328 DIGKKSEQQSLASRGLDFVTDTYLPERLGE 357
>gi|448414640|ref|ZP_21577653.1| DNA topoisomerase VI subunit A [Halosarcina pallida JCM 14848]
gi|445681749|gb|ELZ34177.1| DNA topoisomerase VI subunit A [Halosarcina pallida JCM 14848]
Length = 364
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 162/330 (49%), Gaps = 16/330 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
+P+R SN ++ E V D+ + R S+ RK + + N T
Sbjct: 35 IPTRTKSNIVFDEESKVWVYGDRKSTRSANSVRGARKLLKAAYAIEFLVNQLEENRSSTL 94
Query: 174 RDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y + F DQ++S+ +++D+ + TR ++ E G V+G L +
Sbjct: 95 RELYYLSESWDNEEAQFNDQSESNQLIEDLEIVSHVTREDFHMRPEESGAKVMGPLHIRE 154
Query: 227 N---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
GD I C + +G GG IP N D + + +DA F+L VE RL E+ F
Sbjct: 155 QTRRGDRDIHCQEDVGQGGYQIPNNPDTIEFLGNDAEFVLCVETGGMRDRLVENGFDTEH 214
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
++V GQP ATR +++ EL LPV+ D DP+ +I GS ++ S
Sbjct: 215 DALVVHLGGQPARATRRLTKRLHDELGLPVVVFTDGDPWSYRIYGSVAYGSIKSAHLSEY 274
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ K++GI+P D+ Y +P P+++ D+ + LE+ + W E++ L +
Sbjct: 275 LATPEAKFIGIQPQDIVDYDLPTD---PLSDSDVNALESELEDPRFMTDY-WEEQIQLQL 330
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+KAE Q+L++ G ++++ YLP +L +
Sbjct: 331 DINKKAEQQSLAARGLDFVTDTYLPERLDE 360
>gi|221054093|ref|XP_002261794.1| topoisomerase [Plasmodium knowlesi strain H]
gi|193808254|emb|CAQ38957.1| topoisomerase, putative [Plasmodium knowlesi strain H]
Length = 334
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 152/281 (54%), Gaps = 5/281 (1%)
Query: 154 TVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAA 213
TV ++ L++ + +++ T+R ++Y LF +Q Q++ + V ILG R+SLNV A+
Sbjct: 57 TVSVVQLVNDMVIQDKSCTQRGIYYKLYNLFSEQCQANRHILHVCHILGFPRASLNVYAS 116
Query: 214 EKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
EKG + G L+ N + + ++ G I ++ V ++S A +IL+VEK + Y +L
Sbjct: 117 EKGCIGGLLVLRKNNERLKLNELE-NGLMINDSLLNVDHVESQANYILVVEKYSLYQKLC 175
Query: 274 EDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSK 333
E +N PCI++T KG PD +TR + ++ +L + + D DPYG +I Y G K
Sbjct: 176 EKEIWNILPCILITGKGVPDFSTRKIICELVELFQLECVYVGDYDPYGFRIYLSYKEGCK 235
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
D +++W+G+ D++ IP++ LP++ +D +++L +K +
Sbjct: 236 TNEDDI--FACTNMRWIGMNSQDIE--LIPKEALLPLSMRDKNVLRNMLNGHNLKCSAKV 291
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDW 434
E+ M K +K EI+A+ S G + YL ++ +++W
Sbjct: 292 RTEITQMEKLSKKFEIEAMESLGTDFFIREYLIRRVMRREW 332
>gi|257051217|ref|YP_003129050.1| DNA topoisomerase VI subunit A [Halorhabdus utahensis DSM 12940]
gi|256689980|gb|ACV10317.1| DNA topoisomerase (ATP-hydrolyzing) [Halorhabdus utahensis DSM
12940]
Length = 370
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 173/369 (46%), Gaps = 16/369 (4%)
Query: 74 LSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVL 133
+S D S + + L Q G+ VP+R +N Y PE V
Sbjct: 1 MSTDTGNTEDASDGDARERLIELAAQFYDQFERGDVPHMDVPTRTKTNIEYDPEQKVWVY 60
Query: 134 KDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYT------DVKLFQDQ 187
D+ + R S+ +K + + + + T R+L+Y D F Q
Sbjct: 61 GDRKSTRSSNSVRGAQKLLKVIYSIDFLANQLEEDRSSTLRELYYLSESWDLDEAQFNSQ 120
Query: 188 TQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIF---SDNGDM-IDCTK-MGMGGK 241
+S+ +++D+ + R ++ E G V+G L ++ GD I C +G GG
Sbjct: 121 DESNQIIEDLEIVSDVRREEFHMRPEESGAKVMGPLRLREQTNRGDREIHCQDDVGQGGY 180
Query: 242 AIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLR 301
IP + D + + +DA F+L VE RL E+ F + + ++V GQP ATR +
Sbjct: 181 QIPNDPDTIEFLDNDADFVLCVETGGMRDRLVENGFDDEYNALVVHLGGQPARATRRLTK 240
Query: 302 KMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYK 361
++ EL LPV D DP+ +I GS ++ S L TP+ +++G++P D+ +Y
Sbjct: 241 RLHDELDLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSKYLATPEAQFIGVQPEDIVEYD 300
Query: 362 IPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLS 421
+P P+ + DI + LE+ + + W E++ L + +K+E QAL+S+G +++
Sbjct: 301 LPTD---PLADSDINALESELEDPRFQTDY-WEEQIELQLDIDKKSEQQALASYGLDFVT 356
Query: 422 EVYLPLKLQ 430
+ YLP +L+
Sbjct: 357 DTYLPERLE 365
>gi|393217646|gb|EJD03135.1| topoisomerase acting in meiosis [Fomitiporia mediterranea MF3/22]
Length = 339
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 140/268 (52%), Gaps = 10/268 (3%)
Query: 155 VKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAE 214
+K+++ H+ + +TKRDLFY DV LF Q DA++DD+A RS LN+ A+
Sbjct: 32 LKVVNEAHEALVNQSPMTKRDLFYRDVPLFNTQATVDALVDDLAATFSKKRSELNIRASS 91
Query: 215 KGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGD--MQSDAMFILLVEKDAAYIRL 272
KG+ G + D T IP D + + M D +IL+VEKDA + L
Sbjct: 92 KGLFCGSALTIHLHDGSTITGHNSEAALIPEAQD-IAEFCMNEDITWILVVEKDAVFQTL 150
Query: 273 AEDRFYNR----FPCIIVTAKGQPDVATRLFLRKM--KMELKLPVLALVDSDPYGLKILS 326
+ N P I++T KG PD+ATR ++ + M + +LALVD+D YGL I+S
Sbjct: 151 SRAGLTNHPSLPGPGILITGKGYPDLATRQLVKTLSDNMPEETRILALVDADAYGLDIVS 210
Query: 327 VYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDF 386
VY GS +M +++ +L ++W+G+ + + LP+T D + LL+
Sbjct: 211 VYKYGSMSMQHENESLAAERVEWIGVSAGEALSLGVDRDAFLPITVHDQRKAISLLQSR- 269
Query: 387 VKKNPGWVEELNLMVKTKQKAEIQALSS 414
++ W EL M+ T++KAE + LSS
Sbjct: 270 IQMPSAWRRELMQMLHTRRKAETEVLSS 297
>gi|448730192|ref|ZP_21712502.1| DNA topoisomerase VI subunit A [Halococcus saccharolyticus DSM
5350]
gi|445793923|gb|EMA44488.1| DNA topoisomerase VI subunit A [Halococcus saccharolyticus DSM
5350]
Length = 367
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 168/336 (50%), Gaps = 16/336 (4%)
Query: 106 AGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLC 165
AG + ++P+R SN Y D V D+ + R S+ RK + + +
Sbjct: 30 AGEIPAMEIPTRTKSNIEYDESSDVWVYGDRQSTRSANSVRGARKLLKAIYTIEFLADQL 89
Query: 166 LRNIHVTKRDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-V 218
+ T R+L+Y + F DQ +S+ +++D+ + TR ++ E G +
Sbjct: 90 DADRSSTLRELYYLSESWDEEEAQFNDQDESNQLIEDLEIVSKVTREDFHMRPEESGATL 149
Query: 219 VGRLIFSDN---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
+G L + G+ I C + +G GG IP N D + + DA F+L VE RL
Sbjct: 150 MGPLHLREQTRRGERDIHCQEDVGEGGYQIPNNPDTIEFLDHDAEFVLCVETGGMRDRLV 209
Query: 274 EDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSK 333
E+ F + + I+V KGQP ATR +++ EL LPV+ D DP+ +I GS
Sbjct: 210 ENGFDDDYGTIVVHLKGQPARATRRITKRLHDELDLPVVVFTDGDPWSYRIYGSVAYGSI 269
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
++ S L TP+ +++GI+P D+ +Y +P P+++ DI + L + + + W
Sbjct: 270 KSAHLSDYLATPEAQFIGIQPEDIVEYDLPTD---PLSDSDINALESELTDPRFQTD-YW 325
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
E++ L + ++KAE Q+L++ G ++++ YLP +L
Sbjct: 326 REQIELQLDIEKKAEQQSLAARGLDFVTDTYLPERL 361
>gi|56118718|ref|NP_001008200.1| SPO11 meiotic protein covalently bound to DSB homolog [Xenopus
(Silurana) tropicalis]
gi|51513369|gb|AAH80352.1| spo11 protein [Xenopus (Silurana) tropicalis]
Length = 373
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 138/246 (56%), Gaps = 5/246 (2%)
Query: 83 DLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPF 142
+++ S V + IE +I I S+ + +R + + L + + T R
Sbjct: 41 NITSSQVLAAIERIIQGITESLSKNEAPVLTLDNRTNWANIEFNHLVGLQIAKHCTTRKV 100
Query: 143 AS--LSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACI 200
S + +K + +K+LS+I++L + + TKRD++Y DV+L+ QT D ++ D++C+
Sbjct: 101 RSNCAKSAQKFALMLKVLSVIYKLVQTDTYTTKRDIYYNDVQLYGSQTVVDNIVSDLSCM 160
Query: 201 LGCTRSSLNVIAAEKGVVVGRLIFS-DNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMF 259
L R +L++++ KG V G L F+ ++G + C G +P N++ + + + A F
Sbjct: 161 LKIPRINLHILSTSKGCVAGDLWFTAEDGSKVYCGG-SSSGVLVPINVEGIRHLSTQAKF 219
Query: 260 ILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSD 318
IL++EKDA + RL +D F R PCI++T KG PD+ TRL RK+ +P+ LVD+D
Sbjct: 220 ILIIEKDATFQRLLDDNFCARSGPCILITGKGVPDLNTRLLTRKLWDSFHIPIFTLVDAD 279
Query: 319 PYGLKI 324
PYG K+
Sbjct: 280 PYGTKL 285
>gi|323456369|gb|EGB12236.1| hypothetical protein AURANDRAFT_61362 [Aureococcus anophagefferens]
Length = 1086
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 110/188 (58%), Gaps = 1/188 (0%)
Query: 248 DRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL 307
D +++SDA +++VEKD + RL EDRF+ R+PC++VT G PD+ATR + K++ L
Sbjct: 9 DGAREVESDARCVVVVEKDGIFRRLVEDRFFERYPCVLVTGMGVPDIATRALVHKLRGSL 68
Query: 308 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR 367
+PV LVD + +G+ +L Y GS + ++ T D+KW+G+R S +D+ ++P CR
Sbjct: 69 DVPVYGLVDWNSWGVGVLLCYKVGSARLGLEAVRYTV-DVKWIGLRSSQVDRLELPASCR 127
Query: 368 LPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPL 427
P+T++D + + LL +V P W EL + K E++AL + G ++
Sbjct: 128 QPLTDRDRRRAEGLLAHPWVATKPAWQRELRRQLDLGSKCELEALFAGGDLDAVGAFIET 187
Query: 428 KLQQKDWL 435
+ +D+L
Sbjct: 188 AITTQDYL 195
>gi|448595855|ref|ZP_21653302.1| DNA topoisomerase VI subunit A [Haloferax alexandrinus JCM 10717]
gi|445742309|gb|ELZ93804.1| DNA topoisomerase VI subunit A [Haloferax alexandrinus JCM 10717]
Length = 366
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 16/338 (4%)
Query: 106 AGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLC 165
AG +P+R SN Y + + V D+T+ R S+ RK + + +
Sbjct: 29 AGEIPHMTLPTRTKSNIEYDEDANVWVYGDRTSKRSANSVRGARKLLKAAYTIEFLARQL 88
Query: 166 LRNIHVTKRDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-V 218
+ T R+L+Y + F DQ +S+ +++D+ + R ++ E G +
Sbjct: 89 DEDRSSTLRELYYISESWDNEEAHFSDQDESNKLIEDLEIVSDVKREDFHMRPEESGAKL 148
Query: 219 VGRLIF---SDNGDM-IDCT-KMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
+G L ++ GD I C +G GG IP N D + ++ D F++ VE RL
Sbjct: 149 MGPLKIREQTNRGDREIHCQLDVGQGGYQIPNNPDTIEFLEHDVEFVMCVETGGMRDRLV 208
Query: 274 EDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSK 333
E+ F + + ++V GQP ATR +++ EL LPV+ D DP+ +I GS
Sbjct: 209 ENGFDDDYNALVVHLGGQPARATRRITKRLHDELDLPVVVFTDGDPWSYRIFGSVAYGSI 268
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
++ S L TPD K++GI+P D+ Y +P P+ + DI + LE+ + W
Sbjct: 269 KSAHLSEYLATPDAKFVGIQPQDIVDYDLPTD---PLADSDINALQSELEDPRFMGDY-W 324
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
E++ L + +KAE QAL+S G ++++ YLP +L +
Sbjct: 325 TEQIELQLDIGKKAEQQALASRGLDFVTDEYLPTRLDE 362
>gi|73670271|ref|YP_306286.1| DNA topoisomerase VI subunit A [Methanosarcina barkeri str. Fusaro]
gi|121731963|sp|Q468I6.1|TOP6A_METBF RecName: Full=Type 2 DNA topoisomerase 6 subunit A; AltName:
Full=Type II DNA topoisomerase VI subunit A
gi|72397433|gb|AAZ71706.1| type II DNA topoisomerase VI, subunit A [Methanosarcina barkeri
str. Fusaro]
Length = 369
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 170/342 (49%), Gaps = 35/342 (10%)
Query: 111 SFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVR------KSTITVKILSLIHQL 164
S +PSR SN Y E D V + + R S TV+ K+T + L I++
Sbjct: 38 SISLPSRTKSNLEYSNESDVWVYGGRESER---SAKTVKGAFQLLKTTYATEFL--INEH 92
Query: 165 CLRNIHVTKRDLFYT----DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVV- 219
++ T R+L+Y + F++Q +SD +++D+ + R ++ E G +
Sbjct: 93 LAQSRGSTLRELYYISEGWEAAKFKEQAESDRLIEDLELLTNLQREYFHMRPEEDGATMF 152
Query: 220 GRLIFSDNGDM----IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAE 274
G + ++ + I C K +G GG IP N++ + DA I+ +E Y RL E
Sbjct: 153 GPIEITEQTNRGERNIHCQKDVGEGGYQIPFNVENIEFKAHDASMIIAIETGGMYARLME 212
Query: 275 DRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKN 334
+ F + I+V KGQP +TR +++M EL +PV D DP+ +I + G+
Sbjct: 213 NGFDEAYNAILVHLKGQPARSTRRIIKRMNEELGIPVAVFTDGDPWSYRIYASVAYGAIK 272
Query: 335 MSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLL-----EEDFVKK 389
++ S + TP K+LG++PSD+ +Y++ +TEQDI + L E D+
Sbjct: 273 SAHLSEFMATPAAKFLGLQPSDIVEYELSTD---KLTEQDINALRSELSDPRFESDY--- 326
Query: 390 NPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
W E++ L + +KAE QA + G +++EVYLP +L++
Sbjct: 327 ---WKEQIQLQLDIGKKAEQQAFAGKGLNFVTEVYLPNRLKE 365
>gi|399574436|ref|ZP_10768195.1| hypothetical protein HSB1_02340 [Halogranum salarium B-1]
gi|399240268|gb|EJN61193.1| hypothetical protein HSB1_02340 [Halogranum salarium B-1]
Length = 364
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 165/330 (50%), Gaps = 18/330 (5%)
Query: 113 QVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVT 172
++P+R SN ++ + + V D+T+ R S+ RK V + + + + T
Sbjct: 34 KLPTRTKSNIVFDEDSNVWVYGDRTSTRSANSVRGARKLLKAVYTIDFLAKQLDEDRSST 93
Query: 173 KRDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFS 225
R+L+Y + F DQ +S+ +++D+ + TR ++ E G ++G L
Sbjct: 94 LRELYYLSESWDNEEAQFSDQDESNQLVEDLEIVSKVTREDFHMRPEESGATLMGPLELR 153
Query: 226 DN---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNR 280
+ G+ I C K +G GG IP N D + + D F+L VE RL E+ F
Sbjct: 154 EQTRRGEREIHCQKDVGEGGYQIPNNPDTIEFLDHDIDFVLCVETGGMRDRLVENGFDEE 213
Query: 281 FPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSA 340
+ ++V KGQP ATR +++ EL LPV+ D DP+ +I GS ++ S
Sbjct: 214 YNVLVVHLKGQPARATRRITKRLHDELDLPVVVFTDGDPWSYRIYGSVAYGSIKSAHLSE 273
Query: 341 NLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKT-GKDLLEEDFVKKNPGWVEELNL 399
L TP+ +++GIRP D+ Y +P P+ + DI +L + F ++ W E++ L
Sbjct: 274 YLATPEAEYVGIRPQDIVDYDLPTD---PLADSDINALESELTDPRF--QSEFWKEQIEL 328
Query: 400 MVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
+ +KAE QAL+S G ++++ YLP +L
Sbjct: 329 QLDIGKKAEQQALASRGLDFVTDTYLPERL 358
>gi|301122147|ref|XP_002908800.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099562|gb|EEY57614.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 349
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 155/331 (46%), Gaps = 21/331 (6%)
Query: 93 IETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKST 152
IE L + ++ G + R SS +Y E R ++T L R +
Sbjct: 25 IEALAAEFLETLSTGKVLELEALKRHSSAMIYDHENQRQTHGNETRLVKLNRQGGRRYTG 84
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIA 212
I + IL H L N T+RD++Y F+ Q ++D + D ILG R S+N++A
Sbjct: 85 IWL-ILQTAHALLAENKTATQRDVYYLH-PFFKGQNEADEAILDAGSILGIPRGSMNIVA 142
Query: 213 AEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRL 272
A KG G D ++ + G N + G + ++ L++ I
Sbjct: 143 ATKGCFTG-----DISILVRIHRNG--------NWRQFGSGEEVSITHELLQIKPHDI-- 187
Query: 273 AEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGS 332
ED+F+ P I++T +G PD+ATR F+ + L +PVL L D +P+GL I+ Y GS
Sbjct: 188 -EDKFFETVPSILITGRGFPDLATRAFVNLLSNALGIPVLGLCDCNPFGLSIMLTYKLGS 246
Query: 333 KNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPG 392
M DS DIKW+G+RPS + +P +T +D+ L+ F++ N
Sbjct: 247 ARMPLDSLRYAV-DIKWVGVRPSQVSHLGLPTSSFKALTRKDLAVADSLMRASFIQANAF 305
Query: 393 WVEELNLMVKTK--QKAEIQALSSFGFQYLS 421
+ +E+ + + K E++AL S GF +L+
Sbjct: 306 FKDEVQMWLGDALPWKIELEALYSSGFTFLT 336
>gi|448473864|ref|ZP_21601925.1| DNA topoisomerase VI subunit A [Halorubrum aidingense JCM 13560]
gi|445818443|gb|EMA68300.1| DNA topoisomerase VI subunit A [Halorubrum aidingense JCM 13560]
Length = 361
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 164/329 (49%), Gaps = 16/329 (4%)
Query: 113 QVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVT 172
++P+R SN Y PE D+T+ R S+ RK + + + T
Sbjct: 31 KLPTRTKSNIEYDPESGVWTYGDRTSTRSANSVRGARKLLKAAYTIEFLANQLDDDRSST 90
Query: 173 KRDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFS 225
R+L+Y D F Q +S+ +++D+ + G TR ++ E G ++G L+
Sbjct: 91 LRELYYLSESWDNDEAQFGSQDESNDLVEDLEIVTGVTREDFHMRPEESGATLMGPLLIR 150
Query: 226 DN---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNR 280
+ G+ I C + +G GG IP N D + + D F L VE RL E+ F
Sbjct: 151 EQTRRGEREIHCQEDVGAGGYQIPNNPDMIEFLDDDIDFALAVETGGMRDRLVENGFDED 210
Query: 281 FPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSA 340
+ C+++ KGQP ATR +++ EL +P+ D DP+ +I GS ++ S
Sbjct: 211 YNCLVIHLKGQPARATRRITKRVHDELDVPIAVFADGDPWSYRIYGSVAYGSIKSAHLSK 270
Query: 341 NLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLM 400
L TP+ +++GI+P+D+ +Y +P P+++ D+ + LE+ + + W E++ L
Sbjct: 271 YLATPEAQFVGIQPADIVEYDLPAD---PLSDSDVNALESELEDPRFQTDY-WEEQIELQ 326
Query: 401 VKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
+ +K+E Q+L+S G ++++ YLP +L
Sbjct: 327 LDIGKKSEQQSLASRGLDFVTDTYLPERL 355
>gi|448570959|ref|ZP_21639470.1| DNA topoisomerase VI subunit A [Haloferax lucentense DSM 14919]
gi|445722877|gb|ELZ74528.1| DNA topoisomerase VI subunit A [Haloferax lucentense DSM 14919]
Length = 366
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 16/338 (4%)
Query: 106 AGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLC 165
AG +P+R SN Y + + V D+T+ R S+ RK + + +
Sbjct: 29 AGEIPHMTLPTRTKSNIEYDEDANVWVYGDRTSKRSANSVRGARKLLKAAYTIEFLARQL 88
Query: 166 LRNIHVTKRDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-V 218
+ T R+L+Y + F DQ +S+ +++D+ + R ++ E G +
Sbjct: 89 DEDRSSTLRELYYISESWDNEEAHFSDQDESNKLIEDLEIVSEVKREDFHMRPEESGAKL 148
Query: 219 VGRLIF---SDNGDM-IDCT-KMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
+G L ++ GD I C +G GG IP N D + ++ D F++ VE RL
Sbjct: 149 MGPLKIREQTNRGDREIHCQLDVGQGGYQIPNNPDTIEFLEHDIEFVMCVETGGMRDRLV 208
Query: 274 EDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSK 333
E+ F + + ++V GQP ATR +++ EL LPV+ D DP+ +I GS
Sbjct: 209 ENGFDDDYNALVVHLGGQPARATRRITKRLHDELDLPVVVFTDGDPWSYRIFGSVAYGSI 268
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
++ S L TPD K++GI+P D+ Y +P P+ + DI + LE+ + W
Sbjct: 269 KSAHLSEYLATPDAKFVGIQPQDIVDYDLPTD---PLADSDINALQSELEDPRFMGDY-W 324
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
E++ L + +KAE QAL+S G ++++ YLP +L +
Sbjct: 325 TEQIELQLDIGKKAEQQALASRGLDFVTDEYLPTRLDE 362
>gi|195382444|ref|XP_002049940.1| GJ20469 [Drosophila virilis]
gi|194144737|gb|EDW61133.1| GJ20469 [Drosophila virilis]
Length = 349
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 161/292 (55%), Gaps = 17/292 (5%)
Query: 149 RKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSL 208
+ + V +L+ IH L L T R L+Y D + + Q+ A DV +L +L
Sbjct: 70 HRFCLIVYLLAEIHNLHLSGGSCTIRGLYYRDTHVVRSQSYIVAAKLDVCRMLNTAPVNL 129
Query: 209 NVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDA 267
+++A KG++ G + + NGD++DC + G +P + + V + ++A +L+VEK++
Sbjct: 130 GILSASKGLIAGDIKLLMSNGDILDC-NVYCGAITLPTDFENVERIVTNAEMVLIVEKES 188
Query: 268 AYIRLAEDRFYN----RFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLK 323
+ L N RF I++T KG PD TR + ++ +E LP LVD+DP+G++
Sbjct: 189 VFESLLACNACNTIGLRF--ILLTGKGYPDCTTRRIVHRLSVECNLPAYILVDADPFGIE 246
Query: 324 ILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLE 383
I+ Y GS+ MS+ S +L TP ++WLG+ PS++D I ++ + +T+ D K D+L
Sbjct: 247 IMLTYRHGSQAMSFSSKSLATPMLRWLGLHPSEID--SISKRA-VALTKYDNKKILDILS 303
Query: 384 EDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
++ + G +EL + + + KAEI+++ F LS Y+P K+ + +L
Sbjct: 304 RSYI--SLGVRQELQTLQRIQFKAEIESVIDF----LSPYYIPTKINRNLFL 349
>gi|448410255|ref|ZP_21575120.1| DNA topoisomerase VI subunit A [Halosimplex carlsbadense 2-9-1]
gi|445671951|gb|ELZ24530.1| DNA topoisomerase VI subunit A [Halosimplex carlsbadense 2-9-1]
Length = 363
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 171/348 (49%), Gaps = 16/348 (4%)
Query: 96 LILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITV 155
L + G+ ++P+R SN Y + + V D+ + R ++S K
Sbjct: 16 LAEEFYEQFEGGDVPKMRIPTRTKSNIEYDEDKNVWVYGDRESTRTAKTISGAEKLLKAT 75
Query: 156 KILSLIHQLCLRNIHVTKRDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLN 209
+ + + ++ T R+L+Y D F Q +S+ +++D+ + R +
Sbjct: 76 YTIDFLARQLDQDRSSTLRELYYLSESWDVDEAQFSSQDESNNLIEDLEIVSEVKREDFH 135
Query: 210 VIAAEKGV-VVGRLIF---SDNGDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLV 263
+ E G V+G L+ ++ GD I C +G GG IP N D + + +DA F+L V
Sbjct: 136 MRPEESGAKVMGPLLLREQTNRGDREIHCQDDVGQGGYQIPNNPDTIEFLDNDAEFVLCV 195
Query: 264 EKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLK 323
E RL E+ F + ++V GQP ATR +++ EL LPV D DP+ +
Sbjct: 196 ETGGMRDRLVENGFDDEHDALVVHLGGQPARATRRLTKRLHDELDLPVTVFTDGDPWSYR 255
Query: 324 ILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLE 383
I GS ++ S L TP+ +++G++P D+ +Y +P P+++ D+ + LE
Sbjct: 256 IFGSVSYGSIKSAHLSEYLATPEAQFIGVQPEDIVEYDLPTD---PLSDSDVNALESELE 312
Query: 384 EDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+ + + W E++ L ++ +K+E Q+L+S+G ++++ YLP +L +
Sbjct: 313 DPRFQTDY-WEEQIELQLEIDKKSEQQSLASYGLDFVTDTYLPERLDE 359
>gi|322786130|gb|EFZ12738.1| hypothetical protein SINV_13918 [Solenopsis invicta]
Length = 219
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 134/229 (58%), Gaps = 12/229 (5%)
Query: 208 LNVIAAEKGVVVGRLIFS--DNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
L ++A KG+V G + + DN +IDCT G G IP I V +++ A F+L++EK
Sbjct: 1 LGLLATAKGLVAGNMTITLVDN-QVIDCTIPG--GVQIPQIISNVTSIRAKAEFVLVIEK 57
Query: 266 DAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKIL 325
D + +L E+ CI+VT KG PDVATR+ ++ + +L LPV +VD+DP+G++I+
Sbjct: 58 DTIFQKLLEENCCRILRCILVTGKGYPDVATRMLVKMLSEKLNLPVYIVVDADPFGIEIM 117
Query: 326 SVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEED 385
+Y GS + + +L P+ +WLGI PS+L +P+TE D+ + +
Sbjct: 118 LIYRFGSSTLRKVNESLACPNARWLGIHPSELIAIGAKT---IPLTEADLVKLRSIEARG 174
Query: 386 FVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDW 434
+V N ++L+++ K KAEI+A+SSF +L+E YL K+ +D+
Sbjct: 175 YV--NEAISKQLSIL--RKGKAEIEAVSSFSKNFLTETYLSYKIDGQDY 219
>gi|448423790|ref|ZP_21582123.1| DNA topoisomerase VI subunit A [Halorubrum terrestre JCM 10247]
gi|448448963|ref|ZP_21591461.1| DNA topoisomerase VI subunit A [Halorubrum litoreum JCM 13561]
gi|448506626|ref|ZP_21614582.1| DNA topoisomerase VI subunit A [Halorubrum distributum JCM 9100]
gi|448524343|ref|ZP_21619325.1| DNA topoisomerase VI subunit A [Halorubrum distributum JCM 10118]
gi|445683047|gb|ELZ35452.1| DNA topoisomerase VI subunit A [Halorubrum terrestre JCM 10247]
gi|445699576|gb|ELZ51600.1| DNA topoisomerase VI subunit A [Halorubrum distributum JCM 9100]
gi|445700413|gb|ELZ52414.1| DNA topoisomerase VI subunit A [Halorubrum distributum JCM 10118]
gi|445814055|gb|EMA64027.1| DNA topoisomerase VI subunit A [Halorubrum litoreum JCM 13561]
Length = 361
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 16/338 (4%)
Query: 106 AGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLC 165
AG +P+R SN Y D+T+ R S+ RK + +
Sbjct: 24 AGKIPEMTLPTRTKSNIEYDEASGVWTYGDRTSTRSANSVRGARKLLKAAYTIEFLANQL 83
Query: 166 LRNIHVTKRDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-V 218
+ T R+L+Y D F+ Q +S+ +++D+ + G TR ++ E G V
Sbjct: 84 DDDRSSTLRELYYLSESWDNDEAQFKSQDESNDLVEDLEIVTGVTREDFHMRPEESGAKV 143
Query: 219 VGRLIF---SDNGDM-IDCT-KMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
+G L ++ GD I C +G GG IP N D + + +DA F+L VE RL
Sbjct: 144 MGPLEIREQTNRGDREIHCQLDVGQGGYQIPNNPDTIEFLDNDAEFVLCVETGGMRDRLV 203
Query: 274 EDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSK 333
E+ F ++V GQP ATR ++ + EL LPV+ D DP+ +I GS
Sbjct: 204 ENGFDEAHDALVVHLGGQPARATRRLTKRFRDELDLPVVVFTDGDPWSYRIYGSVAYGSI 263
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
++ S L TP+ +++GI+P D+ +Y +P P+++ DI + LE+ + + W
Sbjct: 264 KSAHLSKYLATPEARFIGIQPEDIVEYDLPSD---PLSDSDINALESELEDPRFQTDY-W 319
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
E++ L + +K+E Q+L+S G ++++ YLP +L +
Sbjct: 320 EEQIELQLDIGKKSEQQSLASRGLDFVTDTYLPERLGE 357
>gi|292655720|ref|YP_003535617.1| DNA topoisomerase VI subunit A [Haloferax volcanii DS2]
gi|448289706|ref|ZP_21480869.1| DNA topoisomerase VI subunit A [Haloferax volcanii DS2]
gi|291370288|gb|ADE02515.1| DNA topoisomerase VI subunit A [Haloferax volcanii DS2]
gi|445581223|gb|ELY35584.1| DNA topoisomerase VI subunit A [Haloferax volcanii DS2]
Length = 366
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 16/338 (4%)
Query: 106 AGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLC 165
AG +P+R SN Y + + V D+T+ R S+ RK + + +
Sbjct: 29 AGEIPHMTLPTRTKSNIEYDEDANVWVYGDRTSKRSANSVRGARKLLKAAYTIEFLARQL 88
Query: 166 LRNIHVTKRDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-V 218
+ T R+L+Y + F DQ +S+ +++D+ + R ++ E G +
Sbjct: 89 DEDRSSTLRELYYISESWDNEEAHFSDQDESNKLIEDLEIVSEVKREDFHMRPEESGAKL 148
Query: 219 VGRLIF---SDNGDM-IDCT-KMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
+G L ++ GD I C +G GG IP N D + ++ D F++ VE RL
Sbjct: 149 MGPLKIREQTNRGDREIHCQLDVGQGGYQIPNNPDTIEFLEHDIDFVMCVETGGMRDRLV 208
Query: 274 EDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSK 333
E+ F + + ++V GQP ATR +++ EL LPV+ D DP+ +I GS
Sbjct: 209 ENGFDDDYNALVVHLGGQPARATRRITKRLHDELDLPVVVFTDGDPWSYRIFGSVAYGSI 268
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
++ S L TPD K++GI+P D+ Y +P P+ + DI + LE+ + W
Sbjct: 269 KSAHLSEYLATPDAKFVGIQPQDIVDYDLPTD---PLADSDINALQSELEDPRFMGDY-W 324
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
E++ L + +KAE QAL+S G ++++ YLP +L +
Sbjct: 325 TEQIELQLDIGKKAEQQALASRGLDFVTDEYLPTRLDE 362
>gi|409728295|ref|ZP_11271162.1| DNA topoisomerase VI subunit A [Halococcus hamelinensis 100A6]
gi|448721868|ref|ZP_21704411.1| DNA topoisomerase VI subunit A [Halococcus hamelinensis 100A6]
gi|445790940|gb|EMA41590.1| DNA topoisomerase VI subunit A [Halococcus hamelinensis 100A6]
Length = 366
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 175/359 (48%), Gaps = 17/359 (4%)
Query: 83 DLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPF 142
D+ SA + I+ L + AG ++P+R SN Y + + V D+ + R
Sbjct: 7 DIDASARERLID-LAAEFYDQFAAGEVPEMRLPTRTKSNIEYDEDSNVWVYGDRESTRSA 65
Query: 143 ASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKL------FQDQTQSDAVLDD 196
S+ RK + + + + + T R+L+Y F DQ +S+ +++D
Sbjct: 66 NSVRGARKLLKAIYTIDFLAEQLDEDRSSTLRELYYLSESWGEKEAQFSDQDESNQLIED 125
Query: 197 VACILGCTRSSLNVIAAEKGV-VVGRLIF---SDNGDM-IDCTK-MGMGGKAIPPNIDRV 250
+ + TR ++ E G ++G L ++ GD I C +G GG IP N D +
Sbjct: 126 LEIVSHVTREDFHMRPEESGAKLMGPLRIREQTNRGDREIHCQDDVGQGGYQIPNNPDTI 185
Query: 251 GDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLP 310
+ D F+L VE RL E+ F F ++V GQP ATR ++++ EL LP
Sbjct: 186 EFLDHDTDFVLCVETGGMRDRLVENGFDEDFSTLVVHLGGQPARATRRIIKRLHDELDLP 245
Query: 311 VLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPM 370
V+ D DP+ +I GS ++ S L TP+ +++GI+P+D+ +Y +P P+
Sbjct: 246 VVVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEARFIGIQPADIVEYDLPTD---PL 302
Query: 371 TEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
++ DI + L + + + W E++ L + +KAE Q+L++ G ++++ YLP +L
Sbjct: 303 SDSDINALESELTDPRFQTDY-WREQIELQLDIGKKAEQQSLAARGLDFVTDTYLPERL 360
>gi|448540823|ref|ZP_21623744.1| DNA topoisomerase VI subunit A [Haloferax sp. ATCC BAA-646]
gi|448549126|ref|ZP_21627902.1| DNA topoisomerase VI subunit A [Haloferax sp. ATCC BAA-645]
gi|448555700|ref|ZP_21631629.1| DNA topoisomerase VI subunit A [Haloferax sp. ATCC BAA-644]
gi|445708976|gb|ELZ60811.1| DNA topoisomerase VI subunit A [Haloferax sp. ATCC BAA-646]
gi|445713815|gb|ELZ65590.1| DNA topoisomerase VI subunit A [Haloferax sp. ATCC BAA-645]
gi|445717223|gb|ELZ68941.1| DNA topoisomerase VI subunit A [Haloferax sp. ATCC BAA-644]
Length = 366
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 164/338 (48%), Gaps = 16/338 (4%)
Query: 106 AGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLC 165
AG +P+R SN Y + + V D+T+ R S+ RK + + +
Sbjct: 29 AGEIPHMTLPTRTKSNIEYDEDANVWVYGDRTSKRSANSVRGARKLLKAAYTIEFLARQL 88
Query: 166 LRNIHVTKRDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-V 218
+ T R+L+Y + F DQ +S+ +++D+ + R ++ E G +
Sbjct: 89 DEDRSSTLRELYYISESWDNEEAHFSDQDESNKLIEDLEIVSEVKREDFHMRPEESGAKL 148
Query: 219 VGRLIF---SDNGDM-IDCT-KMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
+G L ++ GD I C +G GG IP N D + ++ D F++ VE RL
Sbjct: 149 MGPLKIREQTNRGDREIHCQLDVGQGGYQIPNNPDTIEFLEHDIDFVMCVETGGMRDRLV 208
Query: 274 EDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSK 333
E+ F + + ++V GQP ATR +++ EL LPV+ D DP+ +I GS
Sbjct: 209 ENGFDDDYNALVVHLGGQPARATRRITKRLHDELDLPVVVFTDGDPWSYRIFGSVAYGSI 268
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
++ S L TPD K++GI+P D+ Y +P P+ + DI + LE+ + W
Sbjct: 269 KSAHLSEYLATPDAKFVGIQPQDIVDYDLPTD---PLADSDINALQSELEDPRFMGDY-W 324
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
E++ L + +KAE QAL+S G ++++ YLP +L +
Sbjct: 325 TEQIELQLDIGKKAEQQALASRGLDFVTDEYLPTRLDE 362
>gi|389847082|ref|YP_006349321.1| DNA topoisomerase VI subunit A [Haloferax mediterranei ATCC 33500]
gi|448614969|ref|ZP_21663997.1| DNA topoisomerase VI subunit A [Haloferax mediterranei ATCC 33500]
gi|388244388|gb|AFK19334.1| DNA topoisomerase VI subunit A [Haloferax mediterranei ATCC 33500]
gi|445753056|gb|EMA04475.1| DNA topoisomerase VI subunit A [Haloferax mediterranei ATCC 33500]
Length = 366
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 165/338 (48%), Gaps = 16/338 (4%)
Query: 106 AGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLC 165
AG + ++P+R SN Y + + V D+T+ R S+ RK + + +
Sbjct: 29 AGEIPTMELPTRTKSNIEYDEDANVWVYGDRTSTRSANSVRGARKLLKAAYTIEFLARQL 88
Query: 166 LRNIHVTKRDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-V 218
+ T R+L+Y + F Q +S+ +++D+ + TR ++ E G +
Sbjct: 89 EEDRSSTLRELYYLSESWDAEEAHFSGQDESNQLIEDLEIVSEVTREDFHMRPEESGATL 148
Query: 219 VGRLIFSDN---GDM-IDCT-KMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
+G L + G+ I C +G GG IP N D + + D F+L VE RL
Sbjct: 149 MGPLELREQTRRGERDIHCQLDVGEGGYQIPNNPDTIQFLDHDIDFVLCVETGGMRDRLI 208
Query: 274 EDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSK 333
E+ F ++ +IV KGQP ATR +++ EL LPV+ D DP+ +I GS
Sbjct: 209 ENGFDEQYNVLIVHLKGQPARATRRITKRLHDELDLPVVVFTDGDPWSYRIYGSVAYGSI 268
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
++ S L TP+ K++GI+P D+ Y +P P+ + DI + LE+ + W
Sbjct: 269 KSAHLSEYLATPEAKFIGIQPQDIVDYDLPTD---PLADSDINALQSELEDPRFMTDY-W 324
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
E++ L + +KAE QAL++ G +++E YLP +L +
Sbjct: 325 KEQIELQLDIGKKAEQQALAARGLDFVTEEYLPTRLDE 362
>gi|209945790|gb|ACI97126.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 171/327 (52%), Gaps = 21/327 (6%)
Query: 92 TIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKS 151
IE + L++ +++ GN + VP +S N + E R+ ++ + F L
Sbjct: 7 NIERIALELLSNLVHGNA-TLSVPRNSSGN--VISEYRRVSYNNRGSRHSFCVL------ 57
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ +LS +H+L +R T R L+Y + L + Q++ DV +L + SL ++
Sbjct: 58 ---IYMLSRVHRLQVRGGSFTVRGLYYDNPLLVRSQSRIAEARLDVCRMLRTSPLSLGIL 114
Query: 212 AAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYI 270
AA KG+V G L + NGD++D + G G +P + +++ +++ A F+L+VEK++ +
Sbjct: 115 AASKGLVAGDLRLLMTNGDVLDSSLYG-GPLTLPTDPEKIDRIETLAEFVLIVEKESVFE 173
Query: 271 RLAEDRFYNRFP--CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVY 328
L + F I++T KG PD TR + ++ E +L LVD+DP+G++I+ VY
Sbjct: 174 SLLSRNVFGTFERRFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVY 233
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVK 388
GSK+MS+ S LTTP ++W+G+ PS++ + + D K DLL ++
Sbjct: 234 RHGSKSMSFSSQGLTTPALRWIGLHPSEIPALGTGA---VALVAGDNKKINDLLARHDLE 290
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSF 415
PG +EL ++ + I+++ F
Sbjct: 291 --PGVRQELRMLQDVQLXXXIESVIDF 315
>gi|448438357|ref|ZP_21587849.1| DNA topoisomerase VI subunit A [Halorubrum tebenquichense DSM
14210]
gi|445679178|gb|ELZ31651.1| DNA topoisomerase VI subunit A [Halorubrum tebenquichense DSM
14210]
Length = 361
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 161/330 (48%), Gaps = 16/330 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
+P+R SN Y D+T+ R S+ RK + + + T
Sbjct: 32 LPTRTKSNIEYDEASGVWTYGDRTSTRSANSVRGARKLLKAAYTIEFLADQLDDDRSSTL 91
Query: 174 RDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIF-- 224
R+L+Y D F+ Q +S+ +++D+ + G TR ++ E G V+G L
Sbjct: 92 RELYYLSESWDNDEAQFKSQDESNDLVEDLEIVTGVTREDFHMRPEESGAKVMGPLEIRE 151
Query: 225 -SDNGDM-IDCT-KMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
++ GD I C +G GG IP N D + + +DA F+L VE RL E+ F
Sbjct: 152 QTNRGDREIHCQLDVGQGGYQIPNNPDTIEFLDNDAEFVLCVETGGMRDRLVENGFDEEH 211
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
++V GQP ATR ++ + EL LPV+ D DP+ +I GS ++ S
Sbjct: 212 DALVVHLGGQPARATRRLTKRFRDELDLPVVVFTDGDPWSYRIYGSVAYGSIKSAHLSKY 271
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ +++GI+P D+ +Y +P P+ + DI + LE+ + + W E++ L +
Sbjct: 272 LATPEARFIGIQPEDIVEYDLPSD---PLADSDINALESELEDPRFQTDY-WEEQIELQL 327
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+K+E Q+L+S G ++++ YLP +L +
Sbjct: 328 DIGKKSEQQSLASRGLDFVTDTYLPERLGE 357
>gi|348676336|gb|EGZ16154.1| hypothetical protein PHYSODRAFT_506531 [Phytophthora sojae]
Length = 376
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 165/359 (45%), Gaps = 29/359 (8%)
Query: 84 LSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFA 143
+ + V IE L + G + R SS +Y + R + ++ R F
Sbjct: 40 IGIGQVLRRIEALAADFLERLSDGKLLELEALKRNSSALVYDHQNQRQIHGNE---RRFV 96
Query: 144 SLS--TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACIL 201
L+ R+ T IL H L N T+RD++Y F+ Q+++D + D IL
Sbjct: 97 KLNRQGGRRYTGIWLILQTAHALLTENKTATQRDVYYLH-PFFKGQSEADEAILDAGSIL 155
Query: 202 GCTRSSLNVIAAEKGVVVGR---LIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAM 258
G R +N++ A KG G L+ C + G+ + + + SD
Sbjct: 156 GVPRGCMNIVGATKGCFTGDISILVRGAPAHRDGCWRHFGSGEEVSITQELLQLKPSDV- 214
Query: 259 FILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSD 318
ED+FY P I++T +G PD+ATR+F+ + LK+PVL L D +
Sbjct: 215 ---------------EDKFYKMVPSILITGRGFPDLATRVFVSLLSHALKIPVLGLCDCN 259
Query: 319 PYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTG 378
P+GL I+ Y GS M +S DIKW+G+RPS + +P+ +T +DI
Sbjct: 260 PFGLSIMLTYKLGSARMPLESLEYAV-DIKWVGVRPSQIAALGLPQSSFKALTRKDIAVA 318
Query: 379 KDLLEEDFVKKNPGWVEELNLMVKTK--QKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
LL+ FV+ N + +E+ + ++ K E++AL GF +L+ +L +Q+ ++L
Sbjct: 319 NSLLQASFVQANEHYRDEVQMWLEDSLPWKIELEALHFLGFTFLTS-FLQDCIQEGNFL 376
>gi|448455341|ref|ZP_21594521.1| DNA topoisomerase VI subunit A [Halorubrum lipolyticum DSM 21995]
gi|445813943|gb|EMA63916.1| DNA topoisomerase VI subunit A [Halorubrum lipolyticum DSM 21995]
Length = 361
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 164/336 (48%), Gaps = 16/336 (4%)
Query: 106 AGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLC 165
AGN +P+R SN Y E D+T+ R S+ RK + +
Sbjct: 24 AGNIPEMTLPTRTKSNIEYDTESGVWTYGDRTSTRSANSVRGARKLLKAAYTIEFLADQL 83
Query: 166 LRNIHVTKRDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-V 218
+ T R+L+Y D F Q +S+ +++D+ + G TR ++ E G +
Sbjct: 84 DEDRSSTLRELYYLSESWDNDEAQFSSQDESNDLVEDLEIVTGVTREDFHMRPEESGATL 143
Query: 219 VGRLIFSDN---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
+G L+ + G+ I C + +G GG IP N D + + D F L VE RL
Sbjct: 144 MGPLLIREQTRRGEREIHCQEDVGAGGYQIPNNPDMIEFLDDDIDFALAVETGGMRDRLV 203
Query: 274 EDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSK 333
E+ F + C+++ KGQP ATR +++ EL +P+ D DP+ +I GS
Sbjct: 204 ENGFDEEYNCLVIHLKGQPARATRRITKRVHDELDVPIAVFADGDPWSYRIYGSVAYGSI 263
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
++ S L TP+ +++GI+P D+ +Y +P P+++ D+ + L++ + + W
Sbjct: 264 KSAHLSKYLATPEAQFVGIQPEDIVEYDLPAD---PLSDSDVNALESELDDPRFQTDY-W 319
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
E++ L + +K+E Q+L+S G ++++ YLP +L
Sbjct: 320 EEQIELQLDIGKKSEQQSLASRGLDFVTDTYLPERL 355
>gi|298675296|ref|YP_003727046.1| DNA topoisomerase [Methanohalobium evestigatum Z-7303]
gi|298288284|gb|ADI74250.1| DNA topoisomerase (ATP-hydrolyzing) [Methanohalobium evestigatum
Z-7303]
Length = 370
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 166/328 (50%), Gaps = 15/328 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCL-RNIHVT 172
+PSR N Y D V + + R + + T K + + L +N T
Sbjct: 42 LPSRTKGNIEYNSNSDVWVYGGRESERSAKTTKGAYQLLKTSKTIDFVMNNHLGQNRGST 101
Query: 173 KRDLFYTD----VKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVV-GRLIFSD- 226
R+L+Y V F++Q +SD +++D+ I R ++ E G + G L +
Sbjct: 102 LRELYYISENWGVAKFREQPESDKLVEDLEIITNLQREYFHMRPEEDGATLFGPLKLREE 161
Query: 227 ---NGDMIDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFP 282
I C + +G G IP N++ + +++DA FI+ +E Y RL E+ F ++
Sbjct: 162 TKRGARTIHCQEDIGESGYQIPFNVENIEFLENDANFIIAIETGGMYARLIENGFDEKYN 221
Query: 283 CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANL 342
++V KGQP +TR +++M EL LPVL D DP+ +I + G+ ++ S +
Sbjct: 222 AVLVHLKGQPARSTRRIIKRMNEELGLPVLVFTDGDPWSYRIYASIAYGAIKSAHLSEFM 281
Query: 343 TTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVK 402
TP+ K+LG++P+D+ +Y++ +TE+D++ + L + + + W E++ L +
Sbjct: 282 ATPNAKFLGLQPTDIVEYELSTD---KLTERDVEALRSELSDPRFETDY-WKEQIELQLD 337
Query: 403 TKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
K+KAE QA + G +++E YLP +L+
Sbjct: 338 IKKKAEQQAFAGKGLDFVTETYLPDRLK 365
>gi|320034211|gb|EFW16156.1| meiosis-specific topoisomerase Spo11 [Coccidioides posadasii str.
Silveira]
Length = 383
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 152/290 (52%), Gaps = 23/290 (7%)
Query: 141 PFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACI 200
P +++ K + ++IL I + +KRD++Y D F Q D +DD+A
Sbjct: 82 PGKTVTDAWKFGVIMRILGHISEAIEGKFISSKRDIYYLDPPYFGSQRLVDGYIDDIAYT 141
Query: 201 LGCTRSSLNVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMF 259
+G R++L+V AA KG+ VGR I +G +++ + G IP + VG S +
Sbjct: 142 VGVDRAALHVSAAAKGLTVGRYKINLQSGSVLNVGEH-CEGILIPRTHEIVGFDLSGVRW 200
Query: 260 ILLVEKDAAYIRLAEDRFYNRFPC---IIVTAKGQPDVATRLFLRKMKMELK------LP 310
IL++EK+A + RLA ++ I++T KG PD++TR FLR + E + +P
Sbjct: 201 ILIIEKEAVFHRLATSNYHATSAAGGGILITGKGYPDLSTRAFLRSIS-EWRNSPARFIP 259
Query: 311 VLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIP-----EQ 365
+ LVD DP G+ I+S Y GS + S+++ANL P ++WLG+R SD IP ++
Sbjct: 260 IYVLVDCDPDGMAIMSTYKYGSISQSHENANLNVPGVEWLGLRASDT---AIPGNADVDR 316
Query: 366 CRLPMTEQDIKTGKDLLEEDFV---KKNPGWVEELNLMVKTKQKAEIQAL 412
+PMT +D + +L + ++ W EL M+ KAEI+ L
Sbjct: 317 PLIPMTLRDRARAQAMLSHSVIFSDEREQEWRLELQRMLMVNAKAEIEVL 366
>gi|448576109|ref|ZP_21642152.1| DNA topoisomerase VI subunit A [Haloferax larsenii JCM 13917]
gi|445729789|gb|ELZ81383.1| DNA topoisomerase VI subunit A [Haloferax larsenii JCM 13917]
Length = 366
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 164/330 (49%), Gaps = 16/330 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
+P+R SN Y + + V D+T+ R S+ RK + + + + T
Sbjct: 37 LPTRTKSNIEYDEDSNVWVYGDRTSTRSANSVRGARKLLKAAYTIEFLARQLEEDRSSTL 96
Query: 174 RDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSD 226
R+L+Y + F Q +S+ +++D+ + TR ++ E G ++G L +
Sbjct: 97 RELYYLSESWDAEEAHFSGQDESNQLIEDLEIVSEVTREDFHMRPEESGATLMGPLELRE 156
Query: 227 N---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
G+ I C K +G GG IP N D + + D F++ VE RL E+ F + +
Sbjct: 157 QTRRGEREIHCQKDVGEGGYQIPNNPDTIEFLDHDIDFVMCVETGGMRDRLIENGFDDDY 216
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
+IV KGQP ATR ++++ EL LPV+ D DP+ +I GS ++ S
Sbjct: 217 NALIVHLKGQPARATRRITKRLRNELDLPVVVFTDGDPWSYRIFGSVAYGSIKSAHLSEY 276
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TPD +++GI+P D+ Y +P P+++ DI + L++ + W E++ L +
Sbjct: 277 LATPDARFVGIQPQDIVDYDLPTD---PLSDSDINALESELDDPRFMSDY-WTEQIELQL 332
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+KAE QAL++ G ++++ YLP +L +
Sbjct: 333 DIGKKAEQQALAARGLDFVTDEYLPTRLDE 362
>gi|91773183|ref|YP_565875.1| DNA topoisomerase VI subunit A [Methanococcoides burtonii DSM 6242]
gi|91712198|gb|ABE52125.1| DNA topoisomerase, type VI subunit A [Methanococcoides burtonii DSM
6242]
Length = 373
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 168/332 (50%), Gaps = 17/332 (5%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILS-LIHQLCLRNIHVT 172
+ SR +N Y E D V DK T R ++ + TV + L+ ++ T
Sbjct: 45 ISSRTKNNIEYSNESDVWVYGDKETQRTAKTVKGAFQLLKTVHSIDFLVKNHLAQDRGST 104
Query: 173 KRDLFYT----DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVG-----RLI 223
R+L+Y D+ F++Q +S+ +++D+ I R ++ E G + R
Sbjct: 105 LRELYYISENWDIAKFREQAESNRLIEDLEIITSLQREYFHMRPEEDGATMFGPIRIREE 164
Query: 224 FSDNGDMIDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFP 282
+I C + +G G IP N++ + + DA FI+ +E Y RL E+ F ++
Sbjct: 165 TKRGSRIIHCQEDIGESGYQIPFNVENIEFLDHDAKFIIAIETGGMYARLIENGFDEKYN 224
Query: 283 CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANL 342
I+V KGQP +TR +++M EL +PV+ D DP+ +I + G+ ++ S +
Sbjct: 225 AILVHLKGQPARSTRRLIKRMNEELGIPVVVFTDGDPWSYRIFASVAYGAIKSAHLSEFM 284
Query: 343 TTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGK-DLLEEDFVKKNPGWVEELNLMV 401
TP K++G++P+D+ +Y++ +T++D+ + +L + F N W E+++L +
Sbjct: 285 ATPAAKFIGVQPTDIVEYELSTD---KLTDKDVDALRSELTDPRFA--NDYWKEQISLQL 339
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQKD 433
K+KAE QA + G ++++ YLP +L + D
Sbjct: 340 SIKKKAEQQAFAGKGLDFVTDTYLPNRLSEMD 371
>gi|389739919|gb|EIM81111.1| DNA topoisomerase IV alpha subunit [Stereum hirsutum FP-91666 SS1]
Length = 406
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 149/270 (55%), Gaps = 17/270 (6%)
Query: 156 KILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEK 215
+++ + H+ + ++ +TKRD+ Y DV LF+ Q D ++DD++ +G R LNV A+ K
Sbjct: 92 RVIDVAHEALVNDVPITKRDIHYQDVALFKSQRVVDQLIDDISATIGVGRGDLNVRASSK 151
Query: 216 GVVVGRLIFSDNGDMIDCTKMGMGGKAIP--PNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
G++ G + D + G IP +I R D++++ ++L+VEKDA + L
Sbjct: 152 GLICGSSLVLHLVDEGELAVTDSEGSLIPVAEDIARF-DLKTEIHWVLIVEKDAVFQTLC 210
Query: 274 EDRFYNR----FPCIIVTAKGQPDVATRLFLRKMKMEL--KLPVLALVDSDPYGLKILSV 327
R P +IVT KG PD+ATR ++ + L +P+LALVD D YG+ I+SV
Sbjct: 211 RLRLTYHPSLPGPGLIVTGKGYPDLATRQLVKTLSDNLPETVPILALVDGDAYGIDIVSV 270
Query: 328 YGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFV 387
Y GS+ + ++S L ++ +G+ S+L + I L ++ D K ++LL +
Sbjct: 271 YKFGSQALKHESERLAAERVQCIGLWSSELGELGIDNSSLLQISAADEKKARNLL----L 326
Query: 388 KKNP----GWVEELNLMVKTKQKAEIQALS 413
+ +P W +EL M+ T++KAEI+ LS
Sbjct: 327 RADPLLPMRWKKELQSMLFTRRKAEIEILS 356
>gi|448479369|ref|ZP_21604221.1| DNA topoisomerase VI subunit A [Halorubrum arcis JCM 13916]
gi|445822647|gb|EMA72411.1| DNA topoisomerase VI subunit A [Halorubrum arcis JCM 13916]
Length = 361
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 164/338 (48%), Gaps = 16/338 (4%)
Query: 106 AGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLC 165
AG +P+R SN Y D+T+ R S+ RK + +
Sbjct: 24 AGKIPEMTLPTRTKSNIEYDEASGVWTYGDRTSTRSANSVRGARKLLKAAYTIEFLANQL 83
Query: 166 LRNIHVTKRDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-V 218
+ T R+L+Y D F+ Q +S+ +++D+ + G TR ++ E G V
Sbjct: 84 DDDRSSTLRELYYLSESWDNDEAQFKSQDESNDLVEDLEIVTGVTREDFHMRPEESGAKV 143
Query: 219 VGRLIF---SDNGDM-IDCT-KMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
+G L ++ GD I C +G GG IP N D + + +DA F+L VE RL
Sbjct: 144 MGPLEIREQTNRGDREIHCQLDVGQGGYQIPNNPDTIEFLDNDAEFVLCVETGGMRDRLV 203
Query: 274 EDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSK 333
E+ F ++V GQP ATR ++ + EL LPV+ D DP+ +I GS
Sbjct: 204 ENGFDEAHDALVVHLGGQPARATRRLTKRFRDELDLPVVVFTDGDPWSYRIYGSVAYGSI 263
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
++ S L TP+ +++GI+P D+ +Y +P P+++ DI + L++ + + W
Sbjct: 264 KSAHLSKYLATPEARFIGIQPEDIVEYDLPSD---PLSDSDINALESELDDPRFQTDY-W 319
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
E++ L + +K+E Q+L+S G ++++ YLP +L +
Sbjct: 320 EEQIELQLDIGKKSEQQSLASRGLDFVTDTYLPERLGE 357
>gi|452207167|ref|YP_007487289.1| DNA topoisomerase VI subunit A [Natronomonas moolapensis 8.8.11]
gi|452083267|emb|CCQ36553.1| DNA topoisomerase VI subunit A [Natronomonas moolapensis 8.8.11]
Length = 370
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 168/331 (50%), Gaps = 16/331 (4%)
Query: 113 QVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVT 172
++P+R SN ++ + D V D+T+ R S+ +K + + + + T
Sbjct: 40 EIPTRTKSNIVFDEDADVWVYGDRTSTRSANSVRGAQKLLKAIYTIEFLADQLDQGRSST 99
Query: 173 KRDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFS 225
R+L+Y + F Q +S+ +++D+ + G TR ++ E G ++G L
Sbjct: 100 LRELYYLSESWDEERAQFTGQDESNQLVEDLEIVSGVTREDFHMRPEESGATIMGPLYLR 159
Query: 226 DN---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNR 280
+ G+ I C + +G GG IP N D + + DA F+L VE RL E+ F
Sbjct: 160 EQTRRGEREIHCQEDVGEGGYQIPNNPDTIEFLDHDADFVLCVETGGMRDRLVENGFDEA 219
Query: 281 FPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSA 340
+ I+V KGQP ATR R++ EL LP + D DP+ +I + GS ++ S
Sbjct: 220 YNVIVVHLKGQPARATRRITRRLDAELDLPTVVFCDGDPWSYRIYASVAYGSIKSAHLSE 279
Query: 341 NLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLM 400
L TPD +++GI+P D+ Y++P P+++ D+ + LE+ + + W E++ L
Sbjct: 280 YLATPDAEYVGIQPVDIVNYELPTD---PLSDSDVNALESELEDPRFQDDY-WTEQIELQ 335
Query: 401 VKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+ +KAE QAL+S G ++++ YLP +L +
Sbjct: 336 LDIGKKAEQQALASRGLDFVTDTYLPERLGE 366
>gi|222479740|ref|YP_002565977.1| DNA topoisomerase VI subunit A [Halorubrum lacusprofundi ATCC
49239]
gi|222452642|gb|ACM56907.1| Spo11/DNA topoisomerase VI subunit A domain protein [Halorubrum
lacusprofundi ATCC 49239]
Length = 361
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 162/329 (49%), Gaps = 16/329 (4%)
Query: 113 QVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVT 172
++P+R SN Y E D+T+ R S+ RK + + + T
Sbjct: 31 KLPTRTKSNIEYDTESGVWTYGDRTSTRSANSVRGARKLLKAAYTIEFLADQLDEDRSST 90
Query: 173 KRDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFS 225
R+L+Y D F+ Q +S+ +++D+ + G TR ++ E G ++G L+
Sbjct: 91 LRELYYLSESWDNDEAQFKSQDESNDLVEDLEIVTGVTREDFHMRPEESGATLMGPLLIR 150
Query: 226 DN---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNR 280
+ G+ I C + +G GG IP N D + + D F L VE RL E+ F
Sbjct: 151 EQTRRGEREIHCQEDVGTGGYQIPNNPDMIEFLDDDIDFALAVETGGMRDRLVENGFDEA 210
Query: 281 FPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSA 340
+ C+++ KGQP ATR +++ EL +PV D DP+ +I GS ++ S
Sbjct: 211 YNCLVIHLKGQPARATRRITKRVHDELDVPVAVFADGDPWSYRIYGSVAYGSIKSAHLSK 270
Query: 341 NLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLM 400
L TP+ +++GI+P D+ +Y +P P+ + DI + LE+ + + W E++ L
Sbjct: 271 YLATPEAQFVGIQPEDIVEYDLPAD---PLADSDINALESELEDPRFQTDY-WEEQIELQ 326
Query: 401 VKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
+ +K+E Q+L+S G ++++ YLP +L
Sbjct: 327 LDIGKKSEQQSLASRGLDFVTDTYLPERL 355
>gi|330936289|ref|XP_003305327.1| hypothetical protein PTT_18136 [Pyrenophora teres f. teres 0-1]
gi|311317731|gb|EFQ86610.1| hypothetical protein PTT_18136 [Pyrenophora teres f. teres 0-1]
Length = 418
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 187/385 (48%), Gaps = 37/385 (9%)
Query: 60 SSSSSKPLTLSDLSLSATCREVTDLSLSAVQSTIETLILQIARSIL-AGNGFSFQVPSRA 118
S+S PL +L +A+ T +L V + IE ++ +I +L + + + SRA
Sbjct: 35 SASGEPPLLWHEL-YAASPTPPTASTLHWVIARIEAVLEKIVDGLLDESDSLTITLKSRA 93
Query: 119 --SSNQLYVPELDRIVL--KDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKR 174
S Q E+D + K++ P AS T+ ++IL LIH + + +TKR
Sbjct: 94 ALSRRQTTAVEVDGKLPEPKEREINFPGASAQEAWNFTVLLRILELIHGGLVDDTMMTKR 153
Query: 175 DLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRL-IFSDNGDMID- 232
D++Y LF Q+ D +DD+AC G TRS LNV AA KG+V G + +NG I
Sbjct: 154 DIYYRHPDLFVKQSVVDRYVDDLACTFGITRSQLNVTAAAKGLVAGNFRLDRENGHRIHG 213
Query: 233 -CTKMGMGGKAIPPNIDRVGDMQ-SDAMFILLVEKDAAYIRLAEDRFYNRFPC--IIVTA 288
K GM + P + + S+ ++L++EK+A + L + +I+TA
Sbjct: 214 MTEKEGM----LVPIVGENDTLDLSEVHWVLVIEKEATFRSLMASPQWGSLGSYGVILTA 269
Query: 289 KGQPDVATRLFLRK-MKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSY------DSAN 341
KG PDVA+R FLR+ M +P A VD DP G+ ILS Y GS +++ D+
Sbjct: 270 KGYPDVASRNFLRQMMDCAPHIPTYAFVDLDPDGIAILSTYKYGSYRLAHEAVTPTDTPA 329
Query: 342 LTTPDIKWLGIRPSDLDKYKIPE-----------QCRLPMTEQDIKTGKDLLEEDFVKKN 390
+ P+I+WLG++ + + + E Q + +T +D +LE + ++
Sbjct: 330 TSLPNIRWLGVKSHHMSRTPVGEDDTEPSTMPQLQGLMKLTARDRTKAAKMLEWNLCTED 389
Query: 391 ---PGWVEELNLMVKTKQKAEIQAL 412
W +EL M+ KAE+Q L
Sbjct: 390 GPEQDWRQELQKMLMFNIKAEMQIL 414
>gi|258549085|ref|XP_002585415.1| topoisomerase, putative [Plasmodium falciparum 3D7]
gi|254922468|gb|ACT83903.1| topoisomerase, putative [Plasmodium falciparum 3D7]
Length = 336
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 163/291 (56%), Gaps = 22/291 (7%)
Query: 154 TVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAA 213
TV ++ L++++ +++ + T+R+++Y +F++Q Q++ + DV ILG RSSLN+ A+
Sbjct: 58 TVSVVELVNEIIMKDKNCTQREIYYKFYNIFREQNQANKHIKDVCNILGYERSSLNIHAS 117
Query: 214 EKGVVVGRLIFSDNGDMIDCTKM--GMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIR 271
EKG + G LI ++++ ++ G+ N+D++ M A +I++VEK + Y +
Sbjct: 118 EKGCIAGLLILKKGYEILNLSEHENGIMINEFLLNVDKIESM---ANYIIVVEKYSVYQK 174
Query: 272 LAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCG 331
L E++ +N P I++T KG PD++TR + ++ +L + + D DP+G+KI Y G
Sbjct: 175 LCENKIWNILPSILITGKGFPDLSTRKIICELMHTFQLECVYVGDFDPHGIKIYLNYKEG 234
Query: 332 SKNMSYDSANL-TTPDIKWLGIRPSDLDKYKIPEQCRLPMTE------QDIKTGKDLLEE 384
K S D NL ++KW+G+ +D+ + P++ + +T+ Q++K K L
Sbjct: 235 IK--SNDKNNLYACKNMKWIGMCSNDIVFF--PKESLISLTKKEKNILQNLKNNKKFLST 290
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+K E+ M + K EI+A+ G + + YL K+ +K+WL
Sbjct: 291 SQLK------NEIIQMDRINYKFEIEAVQYLGMDFFIKKYLIKKILRKEWL 335
>gi|209945756|gb|ACI97109.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 171/327 (52%), Gaps = 21/327 (6%)
Query: 92 TIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKS 151
IE + L++ +++ GN + VP +S N + + R+ ++ + F L
Sbjct: 7 NIERIALELLSNLVHGNA-TLSVPRNSSGN--VISKYRRVSYNNRGSRHSFCVL------ 57
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ +LS +H+L +R T R L+Y + L + Q++ DV +L + SL ++
Sbjct: 58 ---IYMLSRVHRLQVRGGSFTVRGLYYDNPLLVRSQSRIAEARLDVCRMLRTSPLSLGIL 114
Query: 212 AAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYI 270
AA KG+V G L + NGD++D + G G +P + +++ +++ A F+L+VEK++ +
Sbjct: 115 AASKGLVAGDLRLLMTNGDVLDSSLYG-GPLTLPTDPEKIDRIETLAEFVLIVEKESVFE 173
Query: 271 RLAEDRFYNRFP--CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVY 328
L + F I++T KG PD TR + ++ E +L LVD+DP+G++I+ VY
Sbjct: 174 SLLSRNVFGTFERRFILITGKGYPDCCTRRIVHRLTEENQLAAYILVDADPFGVEIMLVY 233
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVK 388
GSK+MS+ S LTTP ++W+G+ PS++ + + D K DLL ++
Sbjct: 234 RHGSKSMSFSSQGLTTPALRWIGLHPSEIPALGTGA---VALVAGDNKKINDLLARHDLE 290
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSF 415
PG +EL ++ + I+++ F
Sbjct: 291 --PGVRQELRMLQDVQLXXXIESVIDF 315
>gi|448603024|ref|ZP_21656845.1| DNA topoisomerase VI subunit A [Haloferax sulfurifontis ATCC
BAA-897]
gi|445746220|gb|ELZ97682.1| DNA topoisomerase VI subunit A [Haloferax sulfurifontis ATCC
BAA-897]
Length = 366
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 162/330 (49%), Gaps = 16/330 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
+P+R SN Y + + V D+T+ R S+ RK + + + + T
Sbjct: 37 LPTRTKSNIEYDEDANVWVYGDRTSKRSANSVRGARKLLKAAYTIEFLARQLDEDRSSTL 96
Query: 174 RDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIF-- 224
R+L+Y + F DQ +S+ +++D+ + R ++ E G ++G L
Sbjct: 97 RELYYISESWDNEEAHFSDQDESNKLIEDLEIVSEVKREDFHMRPEESGAKLMGPLKIRE 156
Query: 225 -SDNGDM-IDCT-KMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
++ GD I C +G GG IP N D + ++ D F++ VE RL E+ F + +
Sbjct: 157 QTNRGDREIHCQLDVGQGGYQIPNNPDTIEFLEHDIDFVMCVETGGMRDRLVENGFDDDY 216
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
++V GQP ATR +++ EL LPV+ D DP+ +I GS ++ S
Sbjct: 217 NALVVHLGGQPARATRRITKRLHDELDLPVVVFTDGDPWSYRIFGSVAYGSIKSAHLSEY 276
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ K++GI+P D+ Y +P P+ + DI + LE+ + W E++ L +
Sbjct: 277 LATPEAKFVGIQPQDIVDYDLPTD---PLADSDINALQSELEDPRFMGDY-WTEQIELQL 332
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+KAE QAL+S G ++++ YLP +L +
Sbjct: 333 DIGKKAEQQALASRGLDFVTDEYLPTRLDE 362
>gi|448609019|ref|ZP_21660298.1| DNA topoisomerase VI subunit A [Haloferax mucosum ATCC BAA-1512]
gi|445747396|gb|ELZ98852.1| DNA topoisomerase VI subunit A [Haloferax mucosum ATCC BAA-1512]
Length = 366
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 163/338 (48%), Gaps = 16/338 (4%)
Query: 106 AGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLC 165
AG +P+R SN Y + + V D+T+ R S+ RK + + +
Sbjct: 29 AGEIPEMTLPTRTKSNIEYDEDSNVWVYGDRTSTRSANSVRGARKLLKAAYTIEFLARQL 88
Query: 166 LRNIHVTKRDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-V 218
+ T R+L+Y + F Q +S+ +++D+ + TR ++ E G +
Sbjct: 89 EEDRSSTLRELYYLSESWDAEEAHFTGQDESNQLIEDLEIVSEVTREDFHMRPEESGATL 148
Query: 219 VGRLIFSDN---GDM-IDCT-KMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
+G L + G+ I C +G GG IP N D + + D F+L VE RL
Sbjct: 149 MGPLELREQTRRGERDIHCQMDVGEGGYQIPNNPDTIEFLDHDIDFVLCVETGGMRDRLV 208
Query: 274 EDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSK 333
E+ F + + ++V KGQP ATR +++ EL LPV+ D DP+ +I GS
Sbjct: 209 ENGFDDEYNVLVVHLKGQPARATRRITKRLHDELDLPVVVFTDGDPWSYRIFGSVAYGSI 268
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
++ S L TP+ K++GI+P D+ Y +P P+ + DI + LE+ + W
Sbjct: 269 KSAHLSEYLATPEAKFVGIQPQDIVDYDLPTD---PLADSDINALQSELEDPRFMTD-YW 324
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
E++ L + +KAE QAL++ G +++E YLP +L +
Sbjct: 325 KEQIELQLDIGKKAEQQALAARGLDFVTEEYLPTRLDE 362
>gi|428167303|gb|EKX36265.1| meiosis-specific transesterase [Guillardia theta CCMP2712]
Length = 410
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 26/290 (8%)
Query: 156 KILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEK 215
++ L+ L N TKRD+FY D K+F Q SD ++ +A I R LN+++ K
Sbjct: 128 RVAQLVCSLLKANKTSTKRDIFYADGKVFGKQINSDKAIELLARICNVPRFQLNIVSYSK 187
Query: 216 GVVVGRLIFSD-NGDMIDCTKMGMGGKAIPPN--IDRVGDMQSDAMFILLVEKDAAYIRL 272
G+V G L+ D G++I C G +P +D Q+ A+F+ VEK+ + RL
Sbjct: 188 GLVYGALVMKDLQGNLIHCHS---GPTTLPSELFVD-----QAHALFV--VEKECIFRRL 237
Query: 273 AEDRFYNRFPCIIVTAKGQPDVATRLFLRKM-KMELKLPVLALVDSDPYGLKILSVYGCG 331
+ R I++T G PDV TR+ L ++ K LP+ + D DP G++I+ Y G
Sbjct: 238 CDGR------AILLTGCGYPDVQTRILLSRLSKSHPNLPIYGIADWDPDGVEIILTYAFG 291
Query: 332 SKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNP 391
S + ++ L P ++WLG+ +D+ + +P+ RL ++ +D + E +K+NP
Sbjct: 292 SHSREHEREFLRCPTMRWLGLHSNDMKVFGVPKALRLELSSRDRARISRMCERKVIKENP 351
Query: 392 GWVEELNLMVKTKQKAEIQALS------SFGFQYLSEVYLPLKLQQKDWL 435
W EL M+ K EI+ L+ S LS Y+ K+ + D+L
Sbjct: 352 RWRNELEEMLIQDSKYEIECLNAISQGGSNSLSNLSNHYIHDKICRFDYL 401
>gi|413933050|gb|AFW67601.1| hypothetical protein ZEAMMB73_214766 [Zea mays]
Length = 380
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 139/281 (49%), Gaps = 47/281 (16%)
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ +++L ++ QL +N H +KRD++Y +F + D ++D+ + C+R +LNV+
Sbjct: 142 NVLLRVLFVVQQLLQQNKHCSKRDIYYMYPSIFVEVAVVDRAINDICILFKCSRHNLNVV 201
Query: 212 AAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIR 271
KG+V+G + F + + C +IP +I+ + D+ S A +IL+VEK+ + R
Sbjct: 202 PVVKGLVMGWIRFMEGEKKVYCITSVNAAFSIPVDIEAIKDVVSVAHYILVVEKETVFQR 261
Query: 272 LAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCG 331
LA D+F R CI++T
Sbjct: 262 LANDKFCERNRCIVIT-------------------------------------------- 277
Query: 332 SKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKN- 390
+++D+ L PDI+WLG+ SD ++Y +P+ C L ++ +D + + +L ++ +
Sbjct: 278 --QLAHDANLLRVPDIRWLGVFTSDFEEYCLPDCCLLRLSPEDRRKAEGILARCYLHREA 335
Query: 391 PGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
P W EL M++ K EI+ALS+ +LS Y+P K++Q
Sbjct: 336 PEWRSELEAMLQKGVKFEIEALSANSISFLSHEYIPQKIKQ 376
>gi|393245080|gb|EJD52591.1| DNA topoisomerase IV, alpha subunit, partial [Auricularia delicata
TFB-10046 SS5]
Length = 300
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 145/271 (53%), Gaps = 20/271 (7%)
Query: 156 KILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEK 215
+++ L H L + V+KRD++Y D+ LFQ Q ++DD+A G RS L++ AA K
Sbjct: 5 RVIELSHAGLLDGVSVSKRDIYYQDIALFQAQA---TLVDDLAATCGVARSDLHIEAACK 61
Query: 216 GVV--VGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS-----DAMFILLVEKDAA 268
G+ VG + S +G +I G P I D+QS + ++L+VEKDA
Sbjct: 62 GLWCGVGLSMISRSGSVI------AGQHNEPTLIPVQTDIQSIQLADEVAWVLVVEKDAV 115
Query: 269 YIRLAEDRF--YNRFPC--IIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
+ L Y P I++T KG PDVATR + + +P+LALVD+D +G+ I
Sbjct: 116 FQTLCRAGVTTYPTLPGHGILITGKGYPDVATRDLVAALSRFTTVPLLALVDADAHGVDI 175
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
S Y GS+++ ++ L ++W+G+ +DL++ I + LP++ D+K LL
Sbjct: 176 FSCYKYGSRSLQHEQDRLQALRLEWIGVWSTDLNRLGIDKNELLPLSAHDLKKAISLLLS 235
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSSF 415
+ P W EL M++ ++KAE++ L+S
Sbjct: 236 PNCVQEPLWRRELMHMIRFRRKAEVEILASI 266
>gi|397779966|ref|YP_006544439.1| DNA topoisomerase VI subunit A [Methanoculleus bourgensis MS2]
gi|396938468|emb|CCJ35723.1| DNA topoisomerase VI subunit A [Methanoculleus bourgensis MS2]
Length = 419
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 164/334 (49%), Gaps = 24/334 (7%)
Query: 113 QVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITV----KILSLIHQLCLRN 168
++P+R N Y E + DK + R +T KS + + ++ + Q + N
Sbjct: 91 RLPTRTKQNIEYDDESEVWKYGDKESTRA----ATTEKSAVHLLKMAYVIGFLKQQLVEN 146
Query: 169 IHVTKRDLFYTDVKL----FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLI 223
T R+L+Y F Q +S+ +++D+ I R + ++ E G + G L
Sbjct: 147 RSSTLRELYYISEGWRRAKFSAQDESNLLVEDLEIITDVQREAFHLRPEEDGASIFGPLR 206
Query: 224 FSDNGDM----IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFY 278
+ + C + +G G IP N+D + + DA F++ +E Y RL E+ F
Sbjct: 207 IRETTRRGVREMHCQEDVGEAGYPIPNNVDTLDFVDHDAKFVIAIETGGMYARLMENGFD 266
Query: 279 NRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYD 338
+ I+V KGQP +TR LR++ L LPV+ D DP+ +I + GS ++
Sbjct: 267 EEYGAILVHLKGQPARSTRRVLRRLNDSLDLPVVVFTDGDPWSYRIYASVAYGSIKSAHM 326
Query: 339 SANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGK-DLLEEDFVKKNPGWVEEL 397
S L TP +++G++P+D+ Y +P +TEQDI K +L + F + W ++
Sbjct: 327 SELLATPQAQFIGVQPTDISDYNLPADH---LTEQDINALKAELTDPRFATEY--WRSQI 381
Query: 398 NLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
NL ++ K K+E QA +S G ++++ YLP +L +
Sbjct: 382 NLQLEMKLKSEQQAFASRGLDFVTKEYLPTRLSE 415
>gi|426192133|gb|EKV42071.1| hypothetical protein AGABI2DRAFT_212660 [Agaricus bisporus var.
bisporus H97]
Length = 389
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 167/316 (52%), Gaps = 24/316 (7%)
Query: 113 QVPS--RASSNQLYVPELDRIVLKDKTTLRPFASLS-TVRKSTITVKILSLIHQLCLRNI 169
+VP+ R + +++++ +R KT P L+ + R +++ L H+ + +I
Sbjct: 5 KVPAHERRARSKMHLQLANRTTGSTKTLAYPKKCLAGSARPLAQLFRVMDLAHEAIVEDI 64
Query: 170 HVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGR--LIFSDN 227
+TKRD++Y DV+LF+ Q D ++DD+A RSSLN+ A+ KG++ G I+ +
Sbjct: 65 PMTKRDIYYNDVQLFKSQKTVDTLVDDLAATFDLDRSSLNIRASSKGLICGSGLTIYLTS 124
Query: 228 GDMIDCTKMGMGGKAIPPNIDRVG-DMQSDAMFILLVEKDAAYIRLAEDRFYNR--FP-- 282
G+ + T IP D + D ++L++EK+A + L N FP
Sbjct: 125 GETVRPTD--TKATLIPAGEDIFSFGLSEDVRWVLIIEKEAVFQTLCNLEITNSHDFPGR 182
Query: 283 CIIVTAKGQPDVATRLFLRKMK--MELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSA 340
+++T KG PD+ATR ++ + + +P++ALVD DPYGL ILSVY GS+ + +++
Sbjct: 183 GLLITGKGYPDIATRHLVKTLADCLPPSIPIMALVDGDPYGLDILSVYKYGSRALKHENE 242
Query: 341 NLTTPD-IKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNL 399
L D + W+GI S+ I + LP+++ D K LL + +EL
Sbjct: 243 RLAAGDRVVWIGIWASEFSSLGIDKDKLLPISKGDEKKANSLLLQR---------KELMR 293
Query: 400 MVKTKQKAEIQALSSF 415
++ ++KAEI+ LSS
Sbjct: 294 LLFVRRKAEIEILSSI 309
>gi|448624639|ref|ZP_21670587.1| DNA topoisomerase VI subunit A [Haloferax denitrificans ATCC 35960]
gi|445749844|gb|EMA01286.1| DNA topoisomerase VI subunit A [Haloferax denitrificans ATCC 35960]
Length = 366
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 161/330 (48%), Gaps = 16/330 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
+P+R SN Y + + V D+T+ R S+ RK + + + + T
Sbjct: 37 LPTRTKSNIEYDEDANVWVYGDRTSKRSANSVRGARKLLKAAYTIEFLARQLDEDRSSTL 96
Query: 174 RDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIF-- 224
R+L+Y + F DQ +S+ +++D+ + R ++ E G ++G L
Sbjct: 97 RELYYISESWDNEEAHFSDQDESNKLIEDLEIVSEVKREDFHMRPEESGAKLMGPLKIRE 156
Query: 225 -SDNGDM-IDCT-KMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
++ GD I C +G GG IP N D + + D F++ VE RL E+ F + +
Sbjct: 157 QTNRGDREIHCQLDVGQGGYQIPNNPDTIEFLDHDIDFVMCVETGGMRDRLVENGFDDDY 216
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
++V GQP ATR +++ EL LPV+ D DP+ +I GS ++ S
Sbjct: 217 NALVVHLGGQPARATRRITKRLHDELDLPVVVFTDGDPWSYRIFGSVAYGSIKSAHLSEY 276
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
L TP+ K++GI+P D+ Y +P P+ + DI + LE+ + W E++ L +
Sbjct: 277 LATPEAKFVGIQPQDIVDYDLPTD---PLADSDINALQSELEDPRFMGDY-WTEQIELQL 332
Query: 402 KTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+KAE QAL+S G ++++ YLP +L +
Sbjct: 333 DIGKKAEQQALASRGLDFVTDEYLPTRLDE 362
>gi|453083573|gb|EMF11618.1| DNA topoisomerase IV, alpha subunit [Mycosphaerella populorum
SO2202]
Length = 341
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 150/281 (53%), Gaps = 20/281 (7%)
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
++ +++L LIH+ ++ ++KRD++Y D LF QT D +DD+A LG TRS LNV
Sbjct: 49 SVVLRLLELIHEALRNDVVISKRDIYYRDPALFGSQTTVDRYVDDIAYTLGVTRSMLNVC 108
Query: 212 AAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRV--GDMQSDAMFILLVEKDAA 268
AA KG++ G + F ++G D + G + PN+ V D+++ ++L++EK+A
Sbjct: 109 AAAKGLIAGAITFLRNDGSTTDASIDPEG--ILVPNLKEVLSADLKA-VKWVLVIEKEAT 165
Query: 269 YIRLAEDRFYNRF--PCIIVTAKGQPDVATRLFLRKMKME------LKLPVLALVDSDPY 320
+ +A F++ +I+T KG PD+ATR LR PV L D DP
Sbjct: 166 FRSIAGSAFWDTIIREGVIITGKGYPDLATRALLRYCSHPSAQNGFASPPVYGLADFDPD 225
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL--DKYKI-PEQCRLPMTEQDIKT 377
G+ ILS Y GSK ++++S P +KWLG+R L D++ Q RL ++++D
Sbjct: 226 GIAILSTYKRGSKKLAHESKEHVVPQLKWLGLRSEHLHADEFDTHAAQGRLTLSKRDRSK 285
Query: 378 GKDLLEEDF-VKKNPGWVE--ELNLMVKTKQKAEIQALSSF 415
+++ + + +E EL M+ KAE+Q L +
Sbjct: 286 ATMMIDREIDIDDGDALMERRELQTMLMLNTKAELQLLDAM 326
>gi|424811565|ref|ZP_18236816.1| DNA topoisomerase VI, subunit A [Candidatus Nanosalinarum sp.
J07AB56]
gi|339757291|gb|EGQ40872.1| DNA topoisomerase VI, subunit A [Candidatus Nanosalinarum sp.
J07AB56]
Length = 524
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 119/235 (50%), Gaps = 8/235 (3%)
Query: 113 QVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVT 172
+ P R+ +N Y + R+ L D T+ R F ++S RK T + S +L + +
Sbjct: 38 ETPVRSRTNVFYDEDEGRLKLGDSTSTRKFLNMSQARKFMQTTLVASKAKELIQQGSTAS 97
Query: 173 KRDLFYT--------DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIF 224
R+L+Y D F+DQ +S+ V+ D+ G R L++ A KG + G L+
Sbjct: 98 IRELYYQLKHTIEGLDENTFEDQDESNPVVVDLEAATGTIREELHMFAETKGNLFGPLVI 157
Query: 225 SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCI 284
+D GD IDC MG G AIP +D + +A ++L+VE A RL E+ ++ + I
Sbjct: 158 NDAGDRIDCMNMGTSGLAIPSIVDHYEFEECEADYVLVVETQALVNRLVEEDYHEKEDAI 217
Query: 285 IVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDS 339
I+ A GQP TR + + L LPV D+DPYG I SV GS +++ S
Sbjct: 218 IIGAGGQPSRGTRRLVNILHERLDLPVYVFTDADPYGYYIYSVLKSGSMSLANQS 272
>gi|6716731|gb|AAF26720.1|AF214638_1 Spo11 [Coprinopsis cinerea]
Length = 369
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 154/286 (53%), Gaps = 21/286 (7%)
Query: 142 FASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACIL 201
FA+ S+ R ++L ++H+ + TKRD++Y DV LF Q+ D ++DD+A
Sbjct: 59 FATGSS-RSMAQLFRVLDIMHEGLVTGTPTTKRDIYYKDVALFGRQSVVDTLVDDLAATW 117
Query: 202 GCTRSSLNVIAAEKGVVVGRLIFSD--NGDMIDCTKMGMGGKAIPPNIDRVGDMQS---- 255
G R LNV AA KG+V G I + +G+++ G P NI D++S
Sbjct: 118 GTQRCDLNVRAASKGLVCGAGITINLYSGEVV------QGNDTEPSNIPAGEDIESFGVD 171
Query: 256 -DAMFILLVEKDAAY---IRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL--KL 309
D ++L+VEK+A + +L N I+VT KG PD+ATR ++ + L +
Sbjct: 172 EDIAWVLVVEKEAVFQTLCQLGVTHGLNIGKGIMVTGKGYPDIATRHLVKSLGDALPKHV 231
Query: 310 PVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLP 369
+ ALVD DPYG+ ILSVY GS++M +++ L T IKWLG+R S++ ++ + LP
Sbjct: 232 ALAALVDCDPYGIDILSVYRYGSQSMRHENDTLATRRIKWLGLRISEVMEWDLDPSLLLP 291
Query: 370 MTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSF 415
+T+ D + +L+ + + W +EL +KAEI+ L S
Sbjct: 292 LTDYDENKIRSMLKRPHLPRR--WRDELEATQARGRKAEIEVLCSL 335
>gi|219120278|ref|XP_002180881.1| type II DNA topoisomerase VI subunit [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217407597|gb|EEC47533.1| type II DNA topoisomerase VI subunit [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 432
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 145/312 (46%), Gaps = 34/312 (10%)
Query: 139 LRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVA 198
LR L R T + +L H L T R+++Y V ++ Q + D+ + D A
Sbjct: 101 LRKTFHLHQCRSFTSILLVLDFCHSLLRARRTTTTREVYYYHVTHYRSQKECDSAIQDTA 160
Query: 199 CILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMI-------DCTKMGMGGKAIPPNIDRVG 251
+L RSSL + A+ KG G + NG ++ + G+ + P D
Sbjct: 161 ILLQVPRSSLGLKASPKGWFCGDVQLVSNGQVVLDGRHLQSIHGAPISGEWLAPTRDFT- 219
Query: 252 DMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELK-LP 310
A IL++EK+ Y RL EDRF++RFPCI+VT KG PD++TR + + L LP
Sbjct: 220 IHSCAATCILVIEKEGVYNRLVEDRFFDRFPCILVTGKGFPDLSTRALVHVLHHTLGLLP 279
Query: 311 VLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY---------- 360
V L D +PYG+ +L Y ++ P I W+G+RPS + +
Sbjct: 280 VRGLCDCNPYGVMVLHTYQHTARKGVDGGHRFGVP-ISWIGLRPSQVQQLQRQPNTKHGQ 338
Query: 361 -KIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW---------VEELNLMVKTKQKAEIQ 410
K+P+Q +T D K LE + + GW VEEL M+K K E++
Sbjct: 339 SKLPDQVFQSLTALD----KRRLEHHLLSEQHGWTTFGPDERRVEELEEMLKNGYKMELE 394
Query: 411 ALSSFGFQYLSE 422
AL+ G ++++
Sbjct: 395 ALNWLGMDFITK 406
>gi|449298114|gb|EMC94131.1| hypothetical protein BAUCODRAFT_74427 [Baudoinia compniacensis UAMH
10762]
Length = 395
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 147/300 (49%), Gaps = 25/300 (8%)
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
T+ +++L L+H+ ++KRD++Y D LF QT D +DD+A RS+LNV
Sbjct: 82 TVVLRMLELVHEALSTGKTLSKRDIYYRDPALFGSQTHVDRYIDDIAFTFDVPRSALNVT 141
Query: 212 AAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIR 271
A KG+++G + F + G +PP + + ++L++EK+A++
Sbjct: 142 AVAKGLILGAVTFCRRDGSNANAAVDREGVLVPPLSELLSVSMKAVKWVLVIEKEASFRS 201
Query: 272 LAEDRFYNRFPC--IIVTAKGQPDVATRLFLRKMKME------LKLPVLALVDSDPYGLK 323
LA F++R +++T KG PD+ATR LR + PV LVD DP GL
Sbjct: 202 LASSNFWDRLSTEGVLLTGKGYPDIATRALLRFLSEPSPQNGFASPPVYGLVDFDPDGLA 261
Query: 324 ILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL-----DKYKIPEQCRLPMTEQDIKTG 378
IL+ Y GS +++++++L P +KWLG+R + D + Q + +T +D
Sbjct: 262 ILATYKHGSFALAHENSSLQVPQLKWLGLRSEHILMESDDPHA--SQGLMMLTPRDRGKA 319
Query: 379 KDLLEEDFVKKNPG--------WVEELNLMVKTKQKAEIQAL--SSFGFQYLSEVYLPLK 428
+ +LE G W L +M+ KAE+Q L S G L E YL ++
Sbjct: 320 RKMLERSVPGSISGALEADSEEWRGALQVMLMLNVKAELQLLDAQSGGVSELLESYLAMQ 379
>gi|448469585|ref|ZP_21600267.1| DNA topoisomerase VI subunit A [Halorubrum kocurii JCM 14978]
gi|445808922|gb|EMA58973.1| DNA topoisomerase VI subunit A [Halorubrum kocurii JCM 14978]
Length = 361
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 164/338 (48%), Gaps = 16/338 (4%)
Query: 106 AGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLC 165
AGN +P+R SN Y E D+T+ R S+ RK + +
Sbjct: 24 AGNIPEMTLPTRTKSNIEYDTESGVWTYGDRTSTRSANSVRGARKLLKAAYTIEFLADQL 83
Query: 166 LRNIHVTKRDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-V 218
+ T R+L+Y D F Q +S+ +++D+ + G TR ++ E G +
Sbjct: 84 DDDRSSTLRELYYLSESWDNDEAQFTSQDESNDLVEDLEIVTGVTREDFHMRPEESGATL 143
Query: 219 VGRLIFSDN---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
+G L + G+ I C + +G GG IP N D + + D F L VE RL
Sbjct: 144 MGPLEIREQTRRGEREIHCQEDVGEGGYQIPNNPDMIEFLDDDIDFALAVETGGMRDRLV 203
Query: 274 EDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSK 333
E+ F + C+++ KGQP ATR +++ EL +P+ D DP+ +I GS
Sbjct: 204 ENGFDEAYNCLVIHLKGQPARATRRITKRVHDELDVPIAVFADGDPWSYRIYGSVAYGSI 263
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
++ S L TP+ +++GI+P D+ +Y +P P+++ D+ + L++ + + W
Sbjct: 264 KSAHLSKYLATPEAQFVGIQPEDIVEYDLPAD---PLSDSDVNALESELDDPRFQTDY-W 319
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
E++ L + +K+E Q+L+S G ++++ YLP +L +
Sbjct: 320 EEQIELQLDIGKKSEQQSLASRGLDFVTDTYLPERLGE 357
>gi|195028295|ref|XP_001987012.1| GH20206 [Drosophila grimshawi]
gi|193903012|gb|EDW01879.1| GH20206 [Drosophila grimshawi]
Length = 334
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 183/347 (52%), Gaps = 28/347 (8%)
Query: 93 IETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKST 152
+E ++L++ S++ + ++P Y ++V + + F
Sbjct: 12 VEQIVLELISSMINHKNLTLKIPRNCRRTFKY----RKVVYNRRYSRHRFC--------- 58
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIA 212
+ V +L+ IH+L + T R L+Y D + + Q+ A DV +L + L + +
Sbjct: 59 LIVYLLTEIHRLQVFGGSCTVRGLYYQDPQTIRSQSYIVAAKLDVCRMLNTSPVYLGIRS 118
Query: 213 AEKGVVVG--RLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYI 270
A KG++ G +LI S NGD++D + G +P + + V ++++A +L+VEK++ +
Sbjct: 119 AAKGLISGDIKLIMS-NGDVMD-GNVYCGSIMLPTDYENVERIETNAEMVLIVEKESVFE 176
Query: 271 RLAEDRFYNRFPC--IIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVY 328
L ++ F I+VT KG PD TR + ++ +E LP LVD+DP+G++I+ VY
Sbjct: 177 SLLSCNAFSTFGLRFILVTGKGYPDCTTRRIVYRLSVECNLPAYILVDADPFGIEIMLVY 236
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVK 388
GS+ MS S+ L TP ++W+G+ P+++D I ++ +P++ D K D+L +
Sbjct: 237 QYGSQAMSLFSSGLATPMLRWIGLHPTEID--SISKRA-VPLSNYDNKKLIDMLSRSNI- 292
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+ G +EL + +T+ KAEI+++ F LS Y+P K+ + +L
Sbjct: 293 -SVGVRQELCRLQQTQLKAEIESVIDF----LSPYYIPTKINRNLYL 334
>gi|346975573|gb|EGY19025.1| meiotic recombination protein rec12 [Verticillium dahliae VdLs.17]
Length = 425
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 183/378 (48%), Gaps = 62/378 (16%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVP------SRASSNQLYVPELDRIVLKDKTT 138
S ++V + IE ++ ++ + G S SRAS+ L P +T
Sbjct: 47 STASVIARIEGILREVQDDLFHGRALSIPYKARRPGTSRASAGLLRFP---------GST 97
Query: 139 LRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVA 198
R + + V +KILSL H + +TKR++FY DV+LF Q D ++DD+A
Sbjct: 98 PREASKFARV------MKILSLSHGALVGGTILTKRNIFYQDVELFGSQANVDQLVDDLA 151
Query: 199 CILGCTRSSLNVIAAEKGVVVGRL-IFSDNGDMIDCTK---------------MGMGGKA 242
L R LN++AA KG+ G + I NG +D + + G
Sbjct: 152 FTLNLGRDVLNIVAAGKGLASGPVTIHLQNGTQVDMSSGSTVWHTLLRRFIVVLTWQGIL 211
Query: 243 IPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPC---IIVTAKGQPDVATRLF 299
IP D VG + ++L++EK+AA+ LA +++ + +IVT KG PD+ TR F
Sbjct: 212 IPSVRDVVGMNFASTKWVLVIEKEAAFRPLAVQQYWRKSSAGHGVIVTGKGYPDLVTRSF 271
Query: 300 LRKMK-MELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL- 357
L ++ M+ +P++ LVD DP GL+I+ Y GS+++ ++ ++ P ++WLGIR +DL
Sbjct: 272 LHAIQAMKPDMPIVCLVDFDPDGLRIMQCYKHGSQSLRHE-IHVVLPRLQWLGIRSADLM 330
Query: 358 ---------DKYKIPEQ------CRLPMTEQDIKTGKDLL---EEDFVK-KNPGWVEELN 398
D+ +P + +P++ +D + LL +ED + + EL
Sbjct: 331 PDGQRGADGDREGVPRELPADPATVMPLSLRDRSCARKLLASFDEDGADVDDSEYRRELQ 390
Query: 399 LMVKTKQKAEIQALSSFG 416
+M+ K EIQA+ G
Sbjct: 391 IMLVLGVKGEIQAVDDVG 408
>gi|317032060|ref|XP_001393922.2| meiotic recombination protein spo11 [Aspergillus niger CBS 513.88]
Length = 395
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 158/293 (53%), Gaps = 19/293 (6%)
Query: 137 TTLR-PFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLD 195
TT R P ++ K T +++L+ I + + V+KRD++Y+D F Q D ++D
Sbjct: 82 TTYRWPGGDMNEALKFTAALRVLAAIAEAVQAGLVVSKRDIYYSDPICFGSQKTVDTLVD 141
Query: 196 DVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIP--PNIDRVGDM 253
D+A +G R++L V AA KG+VVG + + ++ +P +I +V D+
Sbjct: 142 DLAHTMGVDRAALYVGAAAKGLVVGYYQMTTTSAGVVDARLSNQDTLVPRMQDIHKV-DL 200
Query: 254 QSDAMFILLVEKDAAYIRLAEDRFYNRFPC---IIVTAKGQPDVATRLFLRKM-----KM 305
+ D ++L++EK+A Y RLA ++ R ++VT KG PD++TR F+RK+ ++
Sbjct: 201 K-DVAWVLVLEKEAVYRRLASSNYHIRSAAGKGVLVTGKGYPDLSTRAFVRKLFDHSHQL 259
Query: 306 ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIP-- 363
K ALVD DP G+ I++ Y GS ++++ NL P + WLG+R +++ P
Sbjct: 260 TKKPQFYALVDGDPDGMAIMATYKYGSVAFAHENRNLNVPGLHWLGLRLAEVVAGADPLG 319
Query: 364 EQCRLPMTEQDIKTGKDLLEEDFVKK----NPGWVEELNLMVKTKQKAEIQAL 412
+ L +T++D K D+L ++ V + P W EL M+ KAE++ L
Sbjct: 320 DGTLLHLTKRDRKKAIDMLSKNPVWEADGPEPEWRVELQRMLMLNVKAEMEIL 372
>gi|398393738|ref|XP_003850328.1| hypothetical protein MYCGRDRAFT_45713, partial [Zymoseptoria
tritici IPO323]
gi|339470206|gb|EGP85304.1| hypothetical protein MYCGRDRAFT_45713 [Zymoseptoria tritici IPO323]
Length = 272
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 132/255 (51%), Gaps = 15/255 (5%)
Query: 173 KRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSD-NGDMI 231
RD+FY D LF Q D +DD+A TR++LNV A KG+V G F +G MI
Sbjct: 3 HRDIFYQDPALFGSQPIVDRYVDDIAHTFNITRTALNVTAVAKGIVAGAATFCRRDGSMI 62
Query: 232 DCTKMGMGGKAIPPNIDRVGDMQ-SDAMFILLVEKDAAYIRLAEDRFYNRFPC--IIVTA 288
DC G + PN+ + + + +IL++EK+A + +A F+ II+TA
Sbjct: 63 DCAADREG--LLIPNLKEILSINMASVKWILVIEKEATFRSIAASMFWETTASEGIILTA 120
Query: 289 KGQPDVATRLFLRKMKME------LKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANL 342
KG PD+A+R LR + PV L D DP G+ ILS Y GSK ++++S
Sbjct: 121 KGYPDLASRALLRFVSHPSTKNGFASPPVFGLADFDPDGVAILSTYKHGSKALAHESDGH 180
Query: 343 TTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDF---VKKNPGWVEELNL 399
+ P ++WLG++ S L + Q L +T +D + + +LE+ V+ + W EL
Sbjct: 181 SVPQLQWLGLKSSHLPHDERNPQGVLKLTSRDRRKARAMLEQQHTPDVRLDEEWQSELRQ 240
Query: 400 MVKTKQKAEIQALSS 414
M+ KAE+Q L +
Sbjct: 241 MLMLNVKAELQILDA 255
>gi|170586006|ref|XP_001897772.1| Type IIB DNA topoisomerase family protein [Brugia malayi]
gi|158594796|gb|EDP33375.1| Type IIB DNA topoisomerase family protein [Brugia malayi]
Length = 349
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 147/278 (52%), Gaps = 9/278 (3%)
Query: 155 VKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAE 214
++ +S+IHQL + H TKRDLFY LF +Q D+ ++ + C LG +S ++++
Sbjct: 73 LRTISMIHQLRILKTHKTKRDLFYEQKNLFGEQRNLDSCINQICCWLGMDPTSGYLLSSG 132
Query: 215 KGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAE 274
G+V+G+L + M+DC+ KA + ++ + + IL+VEKDA + +L
Sbjct: 133 HGLVIGQLKIYRSTGMVDCSL-----KAALIDDFSDANLFTTSQCILVVEKDATFQKLIG 187
Query: 275 DRFYNRFP-CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSK 333
+ F FP ++VT +G PD+ATR+ L K+ L + L+D DP+G++I Y G+
Sbjct: 188 EGFLKLFPSTLLVTGRGYPDIATRILLNKLS---NLQLFGLLDCDPHGIEIAMTYKYGNC 244
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
+ ++ N T +W+G+ +L K+ I LP+ + ++ + L + + N
Sbjct: 245 SKTFGVENQTLSHFEWIGLSRCELPKFVISAVQFLPLQKSELAKVEKLCQRTAILGNTAL 304
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+EEL M + K E++A+S + + L KL +
Sbjct: 305 LEELIRMRQCGNKLELEAVSGIAPGSMCQYLLRTKLSK 342
>gi|19114391|ref|NP_593479.1| endonuclease Rec12 [Schizosaccharomyces pombe 972h-]
gi|3123261|sp|P40384.2|REC12_SCHPO RecName: Full=Meiotic recombination protein rec12
gi|6224926|gb|AAF06017.1|AF195027_1 meiotic recombination protein Rec12 [Schizosaccharomyces pombe]
gi|2370483|emb|CAB11511.1| endonuclease Rec12 [Schizosaccharomyces pombe]
Length = 345
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 147/262 (56%), Gaps = 14/262 (5%)
Query: 156 KILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEK 215
++L +H+ + + +TKRD++Y DV LF+ QT D +L D++ +GC+RS LNV A+ K
Sbjct: 76 RVLDCVHEAVISDTVITKRDIYYRDVDLFKRQTVVDELLGDISNTIGCSRSDLNVEASAK 135
Query: 216 GVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAE 274
G+V G + I +NG +I T K + + R+ + S A ++L++EK+A + L E
Sbjct: 136 GLVFGSIHIALENGTVITAT------KPLLISHHRISSITSTAKWVLVIEKEAVFQTLTE 189
Query: 275 DRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKILSVYGCGSK 333
+ + IIVTAKG PD+ TR FL K+ L + D DP+GL I S + GS
Sbjct: 190 EALAD---TIIVTAKGFPDLMTRKFLVKLAKALPDAKFFGIFDWDPHGLCIYSCFKYGSN 246
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
S++ + +++ LG P D + ++ L + ++DIK LL+ + +K P
Sbjct: 247 AYSHEPHS-QLRNLQLLG--PLYEDIFNKNQEFSLKLNKRDIKMITTLLQFEGFQKEPVV 303
Query: 394 VEELNLMVKTKQKAEIQALSSF 415
E+L M+ ++KAEIQA+ F
Sbjct: 304 REQLQRMLFIQKKAEIQAILEF 325
>gi|409075163|gb|EKM75546.1| hypothetical protein AGABI1DRAFT_79675 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 404
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 156/307 (50%), Gaps = 41/307 (13%)
Query: 140 RPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVAC 199
RP A L +++ L H+ + +I TKRD++Y DV+LF+ Q D ++DD+A
Sbjct: 28 RPLAQL---------FRVMDLAHEAIIEDIPATKRDIYYNDVQLFKSQKTVDTLVDDLAA 78
Query: 200 ILGCTRSSLNVIAAEKGVVVGR--LIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDA 257
RSSLN+ A+ KG++ G I+ +G+ + T +I G + D
Sbjct: 79 TFDLDRSSLNIRASSKGLICGSGLTIYLTSGETVRPTDTKATLIPAGEDISSFG-LSEDV 137
Query: 258 MFILLVEKDAAYIRLAEDRFYNR--FP--CIIVTAKGQPDVATRLFLRKMK--MELKLPV 311
++L++EK+A + L+ N FP +++T KG PD+ATR ++ + + ++P+
Sbjct: 138 CWVLIIEKEAVFQTLSNLEITNSHDFPGRGLLITGKGYPDIATRHLVKTLADCLPPRIPI 197
Query: 312 LALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPD-IKWLGIRPSDLDKYKIPEQCRLPM 370
+ALVD DPYGL ILSVY GS+ + +++ L D + W+GI S+ I + LP+
Sbjct: 198 MALVDGDPYGLDILSVYRYGSRALKHENERLAAGDRVVWIGIWASEFSSLGIDKDKLLPI 257
Query: 371 TEQDIKTGK----DLLEE--DFVKKNP----------------GWVEELNLMVKTKQKAE 408
++ D K DLL + V P W +EL ++ ++KAE
Sbjct: 258 SKGDEKKASCFATDLLARVTEAVTWRPLKAFAMLNRPKEMLPTKWKKELMRLLFIRRKAE 317
Query: 409 IQALSSF 415
I+ LSS
Sbjct: 318 IEILSSI 324
>gi|291333565|gb|ADD93260.1| DNA topoisomerase VI subunit A [uncultured archaeon
MedDCM-OCT-S08-C82]
Length = 366
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 170/352 (48%), Gaps = 19/352 (5%)
Query: 93 IETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKST 152
+ ++ ++ I+ G + +P R +N + L K ++R SL + ++
Sbjct: 15 LHEVVTEMYDKIVKGEPPTMTLPVRTKNNIGFDKTLGVYKYGKKRSIRDATSLGSAKQLL 74
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTD----VKLFQDQTQSDAVLDDVACILGCTRSSL 208
+ ++ I ++ N T R+++Y + F Q +S+ + +D+ + C R
Sbjct: 75 RALYVVEFIEEMINTNKSSTLREMYYISESWGLGKFSSQNESNNLAEDLEVVTKCLREDF 134
Query: 209 NVIAAEKGV-VVGRLIFSDNGDMIDCTKM------GMGGKAIPPNID--RVGDMQSDAMF 259
+ E G ++G + + + ++ G G +P N++ ++ ++ D F
Sbjct: 135 KLRPEEDGARMIGNITLQERNRRGEWMRINARDDVGDSGYGVPYNVEEEKIELLEHDVKF 194
Query: 260 ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDP 319
I+ +E + RL E+ F + C +V KGQP +TR L++M E LPV+ +D DP
Sbjct: 195 IMAIETGGMFDRLIENGFDEAYNCALVHLKGQPARSTRRILKRMSEEWDLPVVVFLDGDP 254
Query: 320 YGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGK 379
+ +I + G+ ++ S L TP +LGI D++ Y +P ++ +D+ K
Sbjct: 255 WSFRIFASIAYGAIKTAHISEYLATPTATYLGITSDDIEAYDLPSD---DLSSRDVDALK 311
Query: 380 -DLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
+L + F + W E++N+M++ +KAE Q+L+ +G ++++ YLP KL
Sbjct: 312 AELSDPRFA--DAWWQEQINMMLELGKKAEQQSLAKYGLDFVTDTYLPEKLN 361
>gi|156552691|ref|XP_001599577.1| PREDICTED: meiotic recombination protein SPO11 [Nasonia
vitripennis]
Length = 381
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 161/306 (52%), Gaps = 22/306 (7%)
Query: 142 FASLSTVRKSTITVKILSLIHQLCLRNI-------HVTKRDLFYT----DVKLF-QDQTQ 189
F + +K + +++L +H + N+ + T+R FYT D+K F + + Q
Sbjct: 84 FTANKCRQKFALIMRVLEHVHGNLVNNLDNNESDFYSTRRSFFYTLKNEDIKRFVKREQQ 143
Query: 190 SDAVLDDVACILGCTRSSLNVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNID 248
+ ++ V +L C + KG+V G L + ++G ++ + +P +
Sbjct: 144 VEWAINQVTMMLECGPWEIGFYTTSKGLVAGDLSLHLNDGRCVNYEQRNC--LPVPDVVA 201
Query: 249 RVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELK 308
V +++ A F+L+VEKD+ + +L D CI+VT KG PDV TR+ + + +++
Sbjct: 202 NVTRIRTSADFVLVVEKDSVFQKLLHDELPASSSCILVTGKGYPDVPTRMLVNLLSEKVR 261
Query: 309 LPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRL 368
LPV ALVD++PYG +I+ VY G+ N S L +++WLG+ DL Y IP R+
Sbjct: 262 LPVYALVDANPYGFEIMCVYRFGTLNNSGFRKQLLCSEMRWLGVHQEDLRLYNIP---RV 318
Query: 369 PMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLK 428
+T+ D K +L++ +V + +LM + KAEI+++ ++L++ Y+P K
Sbjct: 319 RLTKGDYKKIGELMDRSYVDSDFS----KHLMEMKQGKAEIESVQQPKKRFLADFYIPEK 374
Query: 429 LQQKDW 434
++ K++
Sbjct: 375 IRLKNY 380
>gi|378728531|gb|EHY54990.1| meiotic recombination protein SPO11 [Exophiala dermatitidis
NIH/UT8656]
Length = 386
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 151/293 (51%), Gaps = 33/293 (11%)
Query: 156 KILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEK 215
+IL I+ I +TKRD++Y D LF+ Q D +DD+A TR LNV A+ K
Sbjct: 105 RILGEINSAIRAGITITKRDIYYRDPMLFKQQETVDRYVDDIAHTCQVTRRDLNVCASPK 164
Query: 216 GVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDA---MFILLVEKDAAYIRL 272
G+V G GD G GG+ +P +I +M S+A +IL++EK+A + L
Sbjct: 165 GLVAGL------GD-------GSGGQ-VPTHIPDHRNMFSEASHIAWILVIEKEATFNTL 210
Query: 273 AEDRFYNR---FPCIIVTAKGQPDVATRLFLRKMKMELKLP--VLALVDSDPYGLKILSV 327
E F+ P ++VTAKG PD+ATR FLR + + P + L D DP G++IL
Sbjct: 211 VEKAFHQHPVLGPGLLVTAKGYPDLATRHFLRNLADHARTPIQIFGLFDWDPDGIQILKC 270
Query: 328 YGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFV 387
Y GSK ++ + + P++KW+GIR D+ + Q LP++ +D + +L +
Sbjct: 271 YLYGSKRLAQEHCCI-LPEMKWIGIRAHDIHRLDGATQESLPLSMRDRALARSMLASEEW 329
Query: 388 KKN-----PGWVE---ELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQK 432
+ PG E E+ ++ +KAEIQ L G + E +L KL+ +
Sbjct: 330 RDELGEILPGLQEATVEIQRLLMLNRKAEIQILDQGGGGF--EQWLVGKLRNR 380
>gi|449546513|gb|EMD37482.1| hypothetical protein CERSUDRAFT_49779 [Ceriporiopsis subvermispora
B]
Length = 349
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 144/270 (53%), Gaps = 14/270 (5%)
Query: 155 VKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAE 214
+K++ L+H+ + ++ TKRD++Y DV LF+ Q+ D ++DD+A RS L+V A+
Sbjct: 28 LKVIDLMHEALVDDVPTTKRDMYYKDVSLFKSQSVVDRLVDDIAATFEMGRSDLHVRASC 87
Query: 215 KGVV--VGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRL 272
KG++ VG + + G+++ I +I ++ ++L+VEK+A + L
Sbjct: 88 KGLISGVGLTMHLNEGEVLHVNATEPTLIPISEDISHF-EVDDSLAWVLVVEKEAVFQTL 146
Query: 273 AEDRFYNR----FPCIIVTAKGQPDVATRLFLRKMKMEL--KLPVLALVDSDPYGLKILS 326
P +++T KG PDVATR ++ + L +P+L LVD D YG+ ILS
Sbjct: 147 CRLNITAHPLLPGPGLLITGKGYPDVATRQLVKTLSDNLPPSIPILCLVDGDAYGIDILS 206
Query: 327 VYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGK--DLLEE 384
VY GS +M ++ L ++WLG+ S+L I +PMT+ D K L
Sbjct: 207 VYKRGSTSMLHERDKLAAGRVRWLGLWTSELAGLGIDRDALIPMTKHDEKKKAMTMLRRP 266
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALSS 414
D +K W +EL M+ ++KAEI+ LS+
Sbjct: 267 DLPRK---WRKELQYMLHNRRKAEIEILST 293
>gi|240277734|gb|EER41242.1| meiosis-specific topoisomerase Spo11 [Ajellomyces capsulatus H143]
Length = 380
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 149/299 (49%), Gaps = 45/299 (15%)
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIA 212
+ ++IL I + + +KRD++Y D F Q+ D +DD+AC +G R++L+V A
Sbjct: 103 VLLRILGHISEAIRGDFISSKRDIYYLDPVYFGSQSVVDRCIDDIACTIGVDRTALHVAA 162
Query: 213 AEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAM-FILLVEKDAAYIR 271
A KG VVG L+ P ++ V + + + +IL++EK+A + R
Sbjct: 163 AAKG-VVGMLV---------------------PRVETVKKIDTSTIRWILVIEKEATFHR 200
Query: 272 LAEDRFYNRFPC---IIVTAKGQPDVATRLFLRKMKME----------LKLPVLALVDSD 318
LA F+ I++T KG PD++TR FL + + P+ LVD D
Sbjct: 201 LATVNFHTTSAAGSGILITGKGYPDISTRAFLHLLSRVPPSASGALPFRQPPIFMLVDGD 260
Query: 319 PYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQ---CRLPMTEQDI 375
P G+ I+S Y GS+ ++D+ NL +++WLG++ S+L + Q +P+T +D
Sbjct: 261 PDGMAIMSTYKYGSRAQAHDNTNLAVHNVQWLGLQASELVPSSLEIQGDDALIPLTSRDR 320
Query: 376 KTGKDLLEEDFV----KKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
K +D+L V P W EL M+ T KAEI+ L + + E +L KLQ
Sbjct: 321 KKAQDMLGRSPVFAEDGPEPAWRRELQHMLMTNVKAEIEML--YEREGGIETWLDHKLQ 377
>gi|432330700|ref|YP_007248843.1| DNA topoisomerase VI, subunit A [Methanoregula formicicum SMSP]
gi|432137409|gb|AGB02336.1| DNA topoisomerase VI, subunit A [Methanoregula formicicum SMSP]
Length = 364
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 157/337 (46%), Gaps = 16/337 (4%)
Query: 106 AGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLC 165
AG S +PSR N Y + DK +LR AS + ++ I Q
Sbjct: 27 AGEIPSISLPSRTKYNIEYDDASEVWKYGDKESLRNAASAKSATHLLKMAYVIGFIKQQL 86
Query: 166 LRNIHVTKRDLFYTDVKL----FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVG 220
N T R+++Y F Q +S+ +++D+ + R ++ E G + G
Sbjct: 87 RENRSSTLREMYYISEGWKRAKFAAQDESNYLIEDLEILSDVPREGFHLHPEENGASIYG 146
Query: 221 RLIFSDNG----DMIDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAED 275
+ + I C +G G IP +++ + + DA F++ +E Y RL E+
Sbjct: 147 PMRIREETRRGMKTIHCQDDVGQAGYTIPNSVENIEFVDHDAKFVIAIETGGMYDRLIEN 206
Query: 276 RFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNM 335
F I+V KGQP +TR L +M M LP+L D DP+ +I G+
Sbjct: 207 GFDEEHNAILVHLKGQPARSTRRMLNRMSMTWDLPILVFTDGDPWSYRIYGSVAYGAIKS 266
Query: 336 SYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGK-DLLEEDFVKKNPGWV 394
++ S L TP ++LG+RPSD+ Y +P +T++D++ + +L + F W
Sbjct: 267 AHMSELLATPKAQFLGLRPSDIRDYNLPSD---KLTDKDVEALRSELTDPRFATDY--WK 321
Query: 395 EELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+E+NL ++ K+E QA ++ G ++++ YLP +L +
Sbjct: 322 KEINLQLEMNLKSEQQAFAARGLDFVTKTYLPARLAE 358
>gi|124485244|ref|YP_001029860.1| DNA topoisomerase VI subunit A [Methanocorpusculum labreanum Z]
gi|124362785|gb|ABN06593.1| DNA topoisomerase (ATP-hydrolyzing) [Methanocorpusculum labreanum
Z]
Length = 365
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 166/354 (46%), Gaps = 28/354 (7%)
Query: 97 ILQIAR----SILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKST 152
+++IA+ I G+ S +P+R N Y E + DK ++R + +
Sbjct: 15 LMEIAKVWYDQIAGGDVPSITLPTRTKYNIEYDDESEVWKYGDKESVRNAGTAKSATHML 74
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVKL----FQDQTQSDAVLDDVACILGCTRSSL 208
++ I N T R+++Y F Q +S+ +++D+ I R
Sbjct: 75 KMAYVIWFIKTQLQENRSSTLREMYYISEGWKQAKFGAQNESNYLIEDLEIITALQREFF 134
Query: 209 NVIAAEKGV-VVGRLIFSDNG----DMIDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILL 262
++ E G + G + +N I C +G G IP N++ V + DA ++
Sbjct: 135 HMRPEEDGASIFGPIRVRENTRRGMKEIHCQDDVGEAGYNIPNNVENVELVDHDASCVIA 194
Query: 263 VEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGL 322
+E + RL E+ F + +++ KGQP ATR L++M EL +PV+ D DP+
Sbjct: 195 IETGGMFSRLQENGFDEEYNAVLLHLKGQPARATRRMLKRMNEELGIPVVVFTDGDPWSY 254
Query: 323 KILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLL 382
+I + GS ++ S L TP +++G++PSD+ +Y +P +TEQD+ K L
Sbjct: 255 RIYASVAYGSIKSAHMSELLATPSAQFIGVKPSDIQRYNLPAD---KLTEQDVSALKAEL 311
Query: 383 EE-----DFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+ DF W +E+NL ++ K+E QA +S G ++++ YLP L +
Sbjct: 312 TDPRFATDF------WKKEINLQLEMNLKSEQQAFASRGLDFVTKEYLPSMLSE 359
>gi|126179533|ref|YP_001047498.1| DNA topoisomerase VI subunit A [Methanoculleus marisnigri JR1]
gi|125862327|gb|ABN57516.1| Spo11/DNA topoisomerase VI, subunit A [Methanoculleus marisnigri
JR1]
Length = 362
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 144/286 (50%), Gaps = 16/286 (5%)
Query: 157 ILSLIHQLCLRNIHVTKRDLFYTDVKL----FQDQTQSDAVLDDVACILGCTRSSLNVIA 212
++ + Q + N T R+L+Y F Q +S+ +++D+ I R + ++
Sbjct: 78 LIGFLKQQLVENRSSTLRELYYISEGWKKAKFGAQDESNHLIEDLEIITEVQREAFHLRP 137
Query: 213 AEKGV-VVGRLIFSDNG----DMIDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKD 266
E G V G L + + C + +G G IP N+D + + DA F++ +E
Sbjct: 138 EEDGASVFGPLRIRETTRRGVKEMHCQEDVGEAGYPIPNNVDNLEFVDHDAKFVIAIETG 197
Query: 267 AAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILS 326
Y RL E+ F + ++V KGQP +TR LRK+ L LPV+ D DP+ +I +
Sbjct: 198 GMYARLMENGFDEEYGAVLVHLKGQPARSTRRVLRKLNDSLGLPVVVFTDGDPWSYRIYA 257
Query: 327 VYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGK-DLLEED 385
GS ++ S L TP +++G++PSD+ Y +P +TEQD+ K +L +
Sbjct: 258 SVAYGSIKSAHMSELLATPQAQFIGVQPSDISDYNLPAD---KLTEQDVSALKAELTDPR 314
Query: 386 FVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
F W ++NL ++ K K+E QA +S G ++++ YLP +L +
Sbjct: 315 FATDY--WRSQINLQLEMKLKSEQQAFASRGLDFVTKEYLPTRLSE 358
>gi|312089432|ref|XP_003146245.1| type IIB DNA topoisomerase [Loa loa]
gi|307758593|gb|EFO17827.1| type IIB DNA topoisomerase [Loa loa]
Length = 359
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 145/278 (52%), Gaps = 9/278 (3%)
Query: 155 VKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAE 214
++ +S+IHQL + + TKRDLFY LF +Q ++ ++ C+LG + ++++
Sbjct: 78 LRTISMIHQLRISKAYKTKRDLFYEQKNLFGEQRNLNSSINRTCCLLGIDPTPGYLLSSG 137
Query: 215 KGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAE 274
G+V+G+L + +DC+ I + R + + A IL+VEKDA + +L
Sbjct: 138 HGLVIGQLKICGSTGTVDCSLKA----TIIDDFSRA-SLFTTAQCILVVEKDAIFQKLIG 192
Query: 275 DRFYNRFP-CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSK 333
+ F FP ++VT +G PD+ATR+ L+K+ LP+ L+D DP+G++I Y G+
Sbjct: 193 EGFLELFPNALLVTGRGYPDIATRIMLKKLS---NLPLFGLLDCDPHGIEIAMTYKYGNC 249
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
+ +D N T +W+G+ L K+ I LP+ ++++ + L + + N
Sbjct: 250 SKKFDVGNRTLSHFEWIGLSRCKLPKFVISAVQFLPLQKRELAKLEKLCQRAAILGNAAL 309
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
EEL M + K E++A+S + + L KL +
Sbjct: 310 FEELIRMRQCGNKLELEAVSGIAPGSMCQYLLRTKLSK 347
>gi|448318072|ref|ZP_21507608.1| DNA topoisomerase VI subunit A, partial [Natronococcus jeotgali DSM
18795]
gi|445600500|gb|ELY54508.1| DNA topoisomerase VI subunit A, partial [Natronococcus jeotgali DSM
18795]
Length = 251
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 136/251 (54%), Gaps = 10/251 (3%)
Query: 187 QTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIF---SDNGD-MIDCT-KMGMGG 240
Q +S+ +++D+ + G TR ++ E G V+G L ++ GD I C +G GG
Sbjct: 1 QDESNGLIEDLEIVSGVTREDFHMRPEESGAKVMGPLHIREQTNRGDRAIHCQLDVGQGG 60
Query: 241 KAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFL 300
IP N D + + +DA F+L VE RL E+ F + I+V GQP ATR
Sbjct: 61 YQIPNNPDMIEFLDNDAEFVLCVETGGMRDRLVENGFDEEYDAIVVHLGGQPARATRRLT 120
Query: 301 RKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY 360
++ EL LPV+ D DP+ +I GS ++ S L TP+ K++GI+P+D+ +Y
Sbjct: 121 KRFHDELDLPVVVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAKFIGIQPADIVEY 180
Query: 361 KIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYL 420
+P P+++ D+ + LE+ + + W E++ L ++ +K+E Q+L+S G ++
Sbjct: 181 DLPTD---PLSDSDVNALESELEDPRFQTDY-WEEQIELQLEIGKKSEQQSLASRGLDFV 236
Query: 421 SEVYLPLKLQQ 431
++ YLP +L +
Sbjct: 237 TDTYLPERLDE 247
>gi|303319823|ref|XP_003069911.1| meiotic recombination protein SPO11, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240109597|gb|EER27766.1| meiotic recombination protein SPO11, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 370
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 138/259 (53%), Gaps = 29/259 (11%)
Query: 172 TKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRL-IFSDNGDM 230
+KRD++Y D F Q D +DD+A +G R++L+V AA KG+ VGR I +G +
Sbjct: 106 SKRDIYYLDPPYFGSQRLVDGYIDDIAYTVGVDRAALHVSAAAKGLTVGRYKINLQSGSV 165
Query: 231 IDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPC---IIVT 287
++ G IP + VG S +IL++EK+A + LA ++ I++T
Sbjct: 166 LN-------GILIPRTHEIVGFDLSGVRWILIIEKEAVFHCLATSNYHATSAAGGGILIT 218
Query: 288 AKGQPDVATRLFLRKMKMELK------LPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
KG PD++TR FLR + E + +P+ LVD DP G+ I+S Y GS + S+++AN
Sbjct: 219 GKGYPDLSTRAFLRSIS-EWRNSPARFIPIYVLVDCDPDGMAIMSTYKYGSISQSHENAN 277
Query: 342 LTTPDIKWLGIRPSDLDKYKIP-----EQCRLPMTEQDIKTGKDLLEEDFV---KKNPGW 393
L P ++WLG+R SD IP ++ +PMT +D + +L + ++ W
Sbjct: 278 LNVPGVEWLGLRASDT---AIPGNADVDRPLIPMTLRDRARAQAMLSHSVIFSDEREQEW 334
Query: 394 VEELNLMVKTKQKAEIQAL 412
EL M+ KAEI+ L
Sbjct: 335 RLELQRMLMVNAKAEIEVL 353
>gi|119498739|ref|XP_001266127.1| meiotic recombination protein spo11 [Neosartorya fischeri NRRL 181]
gi|119414291|gb|EAW24230.1| meiotic recombination protein spo11 [Neosartorya fischeri NRRL 181]
Length = 391
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 147/282 (52%), Gaps = 22/282 (7%)
Query: 150 KSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLN 209
K T ++ +S+I + + V+KRD++Y+D F Q D ++DD+A +G R++LN
Sbjct: 94 KFTAIIRGISVIAEAIQAGLVVSKRDIYYSDPACFGSQQIVDTIIDDIAHTIGVDRAALN 153
Query: 210 VIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAA 268
V A KG+V G + + G+++D ++ IP D S+ ++L++EK+A
Sbjct: 154 VEAVAKGLVAGYYRLMTKAGEVVDA-RLSTKDVLIPKMEDIEAIDASEVKWVLILEKEAV 212
Query: 269 YIRLAEDRFYNRFPC---IIVTAKGQPDVATRLFLRKMKMELK-LPV------LALVDSD 318
Y RL+ ++ R ++VT KG PD++TR F+R++ E + LP ALVDSD
Sbjct: 213 YRRLSRSSYHTRAAAGKGVLVTGKGYPDLSTRAFVRRLLDETRHLPAEESPRFYALVDSD 272
Query: 319 PYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL----DKYKIPEQCRLPMTEQD 374
P G+ I+S Y GS + D+ L ++WLG+R SD+ D + RL + +D
Sbjct: 273 PDGMAIMSTYKYGSMAHARDNEKLNVSKLRWLGLRTSDVIGGADSFGDEAFIRLSL--RD 330
Query: 375 IKTGKDLLEEDFVKKNPG----WVEELNLMVKTKQKAEIQAL 412
K +L + V G W EL M+ KAEI+ L
Sbjct: 331 RKKAVAMLSNNPVWAEDGPEQEWRAELQQMLMLNLKAEIEIL 372
>gi|71483085|gb|AAZ32518.1| DNA topoisomerase VI subunit A [uncultured euryarchaeote Alv-FOS4]
Length = 362
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 165/352 (46%), Gaps = 21/352 (5%)
Query: 97 ILQIARSILA----GNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKST 152
+ +IA I A G+ ++ +R N ++ P D R L
Sbjct: 10 LYEIAEEIYAQLERGDIPHMKLAARHKGNIVFDPRTGVWKYGDSRITRSAKKLDGGYMIL 69
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYT----DVKLFQDQTQSDAVLDDVACILGCTRSSL 208
T+ I+ I + T R+++Y D+ F Q +S+ + +D+ I G R
Sbjct: 70 RTLYIMEFIKDMIRTKKSSTLREMYYISEGWDMAKFHSQDESNKLAEDLEVITGFMREDF 129
Query: 209 NVIAAEKGV-VVGRLIFSDNGD-----MIDCTK-MGMGGKAIPPNI--DRVGDMQSDAMF 259
+ E G V+G + + I+C +G G IP N+ D++ + DA F
Sbjct: 130 KLRPEEDGASVIGNITVEEINRKGKPMRINCRDDVGDSGYLIPYNVENDKLKFVDVDADF 189
Query: 260 ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDP 319
++ +E + RL E+ F + ++V KGQP +TR L++M EL LPV+ D DP
Sbjct: 190 VIGIETGGMFDRLVENGFDEKARAVLVHIKGQPARSTRRLLKRMNEELGLPVVIFTDGDP 249
Query: 320 YGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGK 379
+ +I + G+ ++ S L TP +++GI SD+ Y +P + ++DI K
Sbjct: 250 WSFRIFASIAYGAIKTAHISEYLATPTAEFVGITASDILNYDLPTD---KLNDRDIAALK 306
Query: 380 DLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
L +D P W EE+ LM+ K+KAE QAL+ +G Y+++ YLP KL +
Sbjct: 307 AEL-KDPRFNTPFWNEEIRLMLDIKKKAEQQALAKYGLDYVTDTYLPEKLTE 357
>gi|145353167|ref|XP_001420895.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581131|gb|ABO99188.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 287
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 128/238 (53%), Gaps = 16/238 (6%)
Query: 187 QTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPP 245
+ Q A + ++ LG R +L ++AA KG V GR I + +G DCT G G AI
Sbjct: 30 EHQIAATIRKISQALGAPRIALGIVAASKGQVAGRCHIETASGARFDCTACGNDGWAITG 89
Query: 246 NIDRVG--DMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKM 303
++ + + SDA ++++VEKDA + RL +R + + PC++VTAKG PD+ATR FL +
Sbjct: 90 DLFELDATKIHSDAAYVIVVEKDAVFNRLCAERVFEKLPCVLVTAKGFPDLATRKFLHLL 149
Query: 304 KMEL-------KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSD 356
+ L + LVD +P G ILS Y G+ + + D + TP +KW+G+R D
Sbjct: 150 RRALEDNDRGNEAQFFGLVDWNPSGCWILSTYTVGNSSSAMDVSEYVTP-LKWIGLRSQD 208
Query: 357 LDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNP--GWVEELNLMVKTKQKAEIQAL 412
L Y IPE ++ +D + L E +P + EL +M QKAEI+AL
Sbjct: 209 L--YLIPECAFQALSSRDEAMINNALNET-AATHPLRPFASELEVMQARGQKAEIEAL 263
>gi|374723606|gb|EHR75686.1| DNA topoisomerase VI subunit A [uncultured marine group II
euryarchaeote]
Length = 365
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 173/356 (48%), Gaps = 19/356 (5%)
Query: 90 QSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVR 149
+ + ++ ++ I+ G + +P R +N + +L K ++R SL + +
Sbjct: 11 KQAMHLIVGEMYDRIVKGEPPTMTLPVRTKNNIGFDKKLGVYKYGKKQSIRDATSLGSAK 70
Query: 150 KSTITVKILSLIHQLCLRNIHVTKRDLFYTD----VKLFQDQTQSDAVLDDVACILGCTR 205
+ + ++ I ++ + T R+++Y + F Q +S+ + +D+ + C R
Sbjct: 71 QLLRALHVVEFIEEMLVAGKSSTLREMYYISEAWGLGKFGSQNESNNLAEDLEIVTKCLR 130
Query: 206 SSLNVIAAEKGV-VVGRLIFSDNGDMIDCTKM------GMGGKAIPPNID--RVGDMQSD 256
+ E G ++G L + + ++ G G +P N++ ++ ++ D
Sbjct: 131 EDFKLRPEEDGARMIGNLTLRERNRRGEWMRINARDDVGDSGYGVPYNVEAEKIELLEHD 190
Query: 257 AMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVD 316
FI+ +E + RL E+ F + C ++ KGQP +TR +++M E LPV+ +D
Sbjct: 191 IDFIMAIETGGMFDRLIENGFDEDYRCGLLHLKGQPARSTRRIMKRMSEEWDLPVVVFLD 250
Query: 317 SDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIK 376
DP+ +I + G+ ++ S L TP +LGI D+ Y +P ++++DI+
Sbjct: 251 GDPWSFRIFASIAYGAIKTAHISEYLATPSATYLGITADDIVAYDLPND---DLSKKDIE 307
Query: 377 T-GKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+L + F + W E++N+M++ +KAE Q+L+ +G +++E YLP KL +
Sbjct: 308 ALNAELTDPRFA--DGWWQEQINMMLELGKKAEQQSLAKYGLDFVTETYLPEKLAE 361
>gi|307354510|ref|YP_003895561.1| DNA topoisomerase [Methanoplanus petrolearius DSM 11571]
gi|307157743|gb|ADN37123.1| DNA topoisomerase (ATP-hydrolyzing) [Methanoplanus petrolearius DSM
11571]
Length = 357
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 163/329 (49%), Gaps = 16/329 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
+P+R N Y + +K T R ++ + ++ + N T
Sbjct: 30 LPTRTKHNIEYDEGTEVWKYGEKETTRTASTAKSALHLLKMAYVVGFLKDQIGENRSSTL 89
Query: 174 RDLFYTDVKL----FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIFSDN- 227
R+++Y F Q +S+ +++D+ I +R + ++ E G + G + +
Sbjct: 90 REMYYISEGWKRAKFGAQDESNFLVEDLEIITELSREAFHLRPEEDGASIFGPIKIREQT 149
Query: 228 --GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPC 283
GD I C + +G G +IP N++R+ +++DA F++ +E Y RL E+ F +
Sbjct: 150 RRGDKDIHCVEDVGEAGYSIPNNVERLTFLENDAKFVIAMETGGMYARLMENGFSEEYDA 209
Query: 284 IIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLT 343
+++ KGQP +TR L+++ EL LPV+ D DP+ +I + GS ++ S L
Sbjct: 210 VLLHLKGQPARSTRRMLKRLNNELGLPVVVFTDGDPWSYRIFASIAYGSIKAAHMSDILV 269
Query: 344 TPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGK-DLLEEDFVKKNPGWVEELNLMVK 402
TP +++G++PSD+ Y +P +TE DI K +L + F + W ++NL +K
Sbjct: 270 TPGAQFVGVQPSDISMYNLPSDH---LTEGDIAALKAELTDPRFDTEY--WRNQINLQIK 324
Query: 403 TKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
K+E QA ++ G ++++ YLP +L +
Sbjct: 325 LGLKSEQQAFAARGLDFVTKEYLPARLSE 353
>gi|448439380|ref|ZP_21588021.1| DNA topoisomerase VI subunit A [Halorubrum saccharovorum DSM 1137]
gi|445691431|gb|ELZ43622.1| DNA topoisomerase VI subunit A [Halorubrum saccharovorum DSM 1137]
Length = 361
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 164/336 (48%), Gaps = 16/336 (4%)
Query: 106 AGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLC 165
AG+ +P+R SN Y E D+T+ R S+ RK + +
Sbjct: 24 AGDIPEMTLPTRTKSNIEYDEESGVWTYGDRTSTRSANSVRGARKLLKAAYTIEFLANQL 83
Query: 166 LRNIHVTKRDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-V 218
+ T R+L+Y D F Q +S+ +++D+ + G TR ++ E G +
Sbjct: 84 DDDRSSTLRELYYLSESWDNDEAQFSSQDESNDLVEDLEIVTGVTREDFHMRPEESGATL 143
Query: 219 VGRLIFSDN---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
+G L+ + G+ I C + +G GG IP N D + + D F L VE RL
Sbjct: 144 MGPLLIREQTRRGEREIHCQEDVGAGGYQIPNNPDMIDFLDDDIDFALAVETGGMRDRLV 203
Query: 274 EDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSK 333
E+ F + C+++ KGQP ATR +++ EL +P+ D DP+ +I GS
Sbjct: 204 ENGFDEAYNCLVIHLKGQPARATRRITKRVHDELDVPIAVFADGDPWSYRIYGSVAYGSI 263
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
++ S L TP+ +++GI+P D+ +Y +P P+++ D+ + LE+ + + W
Sbjct: 264 KSAHLSKYLATPEAQFVGIQPEDIVEYDLPSD---PLSDSDVNALESELEDPRFQTDY-W 319
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
E++ L + +K+E Q+L+S G ++++ YLP +L
Sbjct: 320 EEQIELQLDIGKKSEQQSLASRGLDFVTDTYLPERL 355
>gi|440633702|gb|ELR03621.1| hypothetical protein GMDG_06271 [Geomyces destructans 20631-21]
Length = 429
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 139/279 (49%), Gaps = 23/279 (8%)
Query: 155 VKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAE 214
++IL L H+ + I TKRD++Y D LF Q D +DD+A L R +LN++A
Sbjct: 137 LRILELSHEALVTGIVTTKRDIYYRDPDLFIKQAIVDRYIDDLAFTLNIPRDALNIVATA 196
Query: 215 KGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQ-SDAMFILLVEKDAAYIRL 272
KG++ G L I +G ++DC+ G + PN + + +IL++EK+A + L
Sbjct: 197 KGLLSGSLHIHKHDGQIVDCSSENEG--ILVPNTKDISHLSFPSCNWILVIEKEATFRTL 254
Query: 273 A---EDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKL-PVLALVDSDPYGLKILSVY 328
+ R P ++VTAKG PD+ATR L + P+ L D DP+G+ ILS Y
Sbjct: 255 STTHHARTSRAGPGLLVTAKGYPDIATRALLHLLSSTRGCPPIYVLTDYDPHGISILSTY 314
Query: 329 GCGSKNMSYDSANLTTPDIKWLG----------IRPSDLDKYKIPEQCRLPMTEQDIKTG 378
GS ++++ + L P ++WLG IR + ++P L +T++D + G
Sbjct: 315 AHGSASLAHQNDGLAVPGLRWLGVKLESAVGTQIRQDEDRGGEVPGI--LTLTKRDRRLG 372
Query: 379 KDLLEEDFVKKNPG---WVEELNLMVKTKQKAEIQALSS 414
+ +L G W E+ M+ KAEIQ L
Sbjct: 373 RSMLMRHPAMGEVGEEEWRREVQCMLFLNLKAEIQVLGG 411
>gi|88604153|ref|YP_504331.1| DNA topoisomerase VI subunit A [Methanospirillum hungatei JF-1]
gi|88189615|gb|ABD42612.1| DNA topoisomerase, type IIB [Methanospirillum hungatei JF-1]
Length = 340
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 157/331 (47%), Gaps = 18/331 (5%)
Query: 111 SFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASL-STVRKSTITVKILSLIHQLCLRNI 169
S +P+R N Y E + D+ LR + S + + I L HQ+ N
Sbjct: 8 SITMPTRTKRNIAYDEEAEVWKYGDRERLREAGTEKSALHILKMAYVIWFLKHQIT-ENR 66
Query: 170 HVTKRDLFYTDVKL----FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRLIF 224
T R+L+Y F Q S+ +++D+ + R ++ E G + G L
Sbjct: 67 SSTLRELYYISEGWKRAKFAAQNDSNLLVEDLEILTDVQREHFHLRPEEDGASIFGPLRI 126
Query: 225 SDNGDM----IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYN 279
++ + C +G G IP N+D + ++ DA ++ +E Y RL E+ F
Sbjct: 127 REDTRRGTRELHCQDDIGESGYQIPTNVDSLEFVEHDAQMVIAIETGGMYARLIENGFDE 186
Query: 280 RFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDS 339
++ I+V KGQP +TR L ++ E +LPV D DP+ +I + G+ ++ S
Sbjct: 187 KYQAILVHLKGQPARSTRRVLNRLASEFQLPVTVFTDGDPWSYRIFASVAYGAIKSAHIS 246
Query: 340 ANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGK-DLLEEDFVKKNPGWVEELN 398
L TP +++G++PSD+ Y +P +TEQDI K +L + F W E++N
Sbjct: 247 EILVTPSARFIGVQPSDIRDYDLPSDL---LTEQDIAALKAELTDPRFAGDY--WKEQIN 301
Query: 399 LMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
L + K+E QA ++ G ++++ YLP +L
Sbjct: 302 LQLALNLKSEQQAFAARGLDFVTDEYLPARL 332
>gi|425773684|gb|EKV12019.1| Meiosis-specific topoisomerase Spo11, putative [Penicillium
digitatum Pd1]
gi|425775995|gb|EKV14234.1| Meiosis-specific topoisomerase Spo11, putative [Penicillium
digitatum PHI26]
Length = 386
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 152/299 (50%), Gaps = 29/299 (9%)
Query: 141 PFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACI 200
P + K T+ ++IL+++ Q ++KRD++Y D + F+ Q D ++DD+A
Sbjct: 81 PGKTAHEAWKFTVILRILAILDQAIRTGQLISKRDIYYIDPEFFRVQYIVDHIVDDLAYT 140
Query: 201 LGCTRSSLNVIAAEKGVVVG--RLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDM--QSD 256
+G R++LNV AA KG+V G RLI G I + ++ P I+ GD S
Sbjct: 141 IGVNRTALNVEAAAKGLVTGDYRLI---RGSHILIDAHSVIEDSLIPRIEN-GDKIDISR 196
Query: 257 AMFILLVEKDAAYIRLAEDRFYNRF---PCIIVTAKGQPDVATRLFLRKM-----KMELK 308
++L++EK+A + RLA ++ R I+VT KG PD TR FLR + K
Sbjct: 197 IRWVLVIEKEAVFHRLARISYHTRALAGEGIMVTGKGYPDFMTRTFLRAISDSASKQSRS 256
Query: 309 LP-VLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPE--- 364
P AL D DP+G+ I+S Y GS + +A L+ P ++WLG+R +D+ +PE
Sbjct: 257 QPRFYALTDGDPHGMAIMSTYKYGSAAHLHQNARLSIPRLQWLGLRVTDI--IAVPEVLG 314
Query: 365 -QCRLPMTEQDIKTGKDLLEEDFVKKN----PGWVEELNLMVKTKQKAEIQALSSFGFQ 418
L +T QD K +L V + P W EL M+ KAEI+ L +G Q
Sbjct: 315 DTALLSLTMQDRKKIMAMLRNSPVWASDGPEPEWRAELQRMMILNLKAEIEIL--YGCQ 371
>gi|355570752|ref|ZP_09042022.1| Type 2 DNA topoisomerase 6 subunit A [Methanolinea tarda NOBI-1]
gi|354826034|gb|EHF10250.1| Type 2 DNA topoisomerase 6 subunit A [Methanolinea tarda NOBI-1]
Length = 351
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 165/353 (46%), Gaps = 26/353 (7%)
Query: 95 TLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTIT 154
+ +Q R + GN S +P+R N Y E + L D+ ++R S T R +
Sbjct: 2 AIAMQWYRQMAEGNIPSITLPTRTKQNIAYDDESEVWKLGDRESVR---SAHTARSALHL 58
Query: 155 VK---ILSLIHQLCLRNIHVTKRDLFYTDVKL----FQDQTQSDAVLDDVACILGCTRSS 207
+K ++ + N T R+L+Y F Q +S+ +++D+ + R +
Sbjct: 59 LKMSYVIGFLKTQLRENRSSTLRELYYISEGWKKAKFSAQDESNYLIEDLEILTDLQREA 118
Query: 208 LNVIAAEKGVVV-GRLIFSD---NGD-MIDCTK-MGMGGKAIPPNIDRVGDMQSDAMFIL 261
++ E G + G L + G+ +I C +G G IP N++ V + DA ++
Sbjct: 119 FHLRPEEDGATIFGPLRLKEMTRRGERIIHCRDDVGEAGYQIPCNVENVELLDHDASCVI 178
Query: 262 LVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYG 321
+E Y RL E+ F + I+V KGQP +TR L ++ E LPV D DP+
Sbjct: 179 AIETGGMYARLIENGFDEEYRAILVHLKGQPARSTRRMLHRLSDEFNLPVYVFTDGDPWS 238
Query: 322 LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDL 381
+I + G+ ++ S L TP +++G++PSD+ Y +P +TE+DI
Sbjct: 239 YRIYASVAYGAIKSAHMSELLATPKAQFIGVQPSDIRDYNLPADA---LTEKDIAA---- 291
Query: 382 LEEDFVKKNPG---WVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
L+ + G W E++ L + K+E QA ++ G +++ YLP +L +
Sbjct: 292 LQSELTDPRFGSSYWKEQIQLQLALNLKSEQQAFAARGLDFVTREYLPRRLSE 344
>gi|443920159|gb|ELU40140.1| topoisomerase acting in meiosis [Rhizoctonia solani AG-1 IA]
Length = 472
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 148/283 (52%), Gaps = 28/283 (9%)
Query: 155 VKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAE 214
+K+ L H ++ TKRD+FY+DV+LF Q+ SD V DD+A LG TR L + AA
Sbjct: 142 LKVAELSHLALKDDVPTTKRDIFYSDVELFGKQSVSDLV-DDLAATLGLTRGDLGIRAAL 200
Query: 215 KGVVVGRLIF--SDNGDMIDCTKMGMGGKAIPPNIDRVG-DMQSDAMFILLVEKDAAYIR 271
KG+ G + + G++I M IP D V ++ D ++L+VEK+A +
Sbjct: 201 KGLFCGSALTLTTSKGEVI--RGMDFEETLIPVGEDIVNVNIDEDLAWVLIVEKEAIFQT 258
Query: 272 LAEDRFYNRFPCI----IVTAKGQPDVATRLFLRKMKMEL------KLPVLALVDSDPYG 321
L F + I I+T KG PD+ATR + EL +P+L LVD+DP+G
Sbjct: 259 LCALGFASAHKSIGRGVIITGKGYPDLATRQLVSVFSSELPEWSDYSIPILCLVDADPHG 318
Query: 322 LKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL----DKYKIPEQCRLPMTEQDIKT 377
+ ILSVY GSK + ++ ++ ++W+G++ + ++ IP L T DI+
Sbjct: 319 MDILSVYKFGSKTLVHE--DVAAERVQWIGVKRLTVLTWRNRLGIPSLEMLKTTSADIRK 376
Query: 378 GKDLLEEDFVKKNPGWV----EELNLMVKTKQKAEIQALSSFG 416
+++L + WV EEL M++T KAEI+ +S G
Sbjct: 377 AENMLRSQTLPSE--WVYVPREELEQMLQTGTKAEIEVISGRG 417
>gi|317148419|ref|XP_001822758.2| meiotic recombination protein spo11 [Aspergillus oryzae RIB40]
Length = 395
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 148/290 (51%), Gaps = 16/290 (5%)
Query: 141 PFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACI 200
P A+ K T+ ++L+++ + V+KRD++Y+D F Q D ++DD+A
Sbjct: 87 PGANTFEAWKFTVVFRVLAVVADAIGTGVVVSKRDIYYSDPACFGTQRIVDTIVDDLAYT 146
Query: 201 LGCTRSSLNVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMF 259
+G RS+LNV AA KG+V G + + +G+ +D ++ +P + D SDA +
Sbjct: 147 IGVDRSALNVEAAAKGLVAGYCSLLTKSGETMDV-QLPAKDCLVPSSQDDRELNISDASW 205
Query: 260 ILLVEKDAAYIRLAEDRFYNRFPC---IIVTAKGQPDVATRLFLRKM-----KMELKLPV 311
+L++EK+A Y RL ++ R I++T KG PD++TR F+RK+ + + L
Sbjct: 206 VLIIEKEAIYRRLTRSNYHTRAAAGKGILITGKGYPDLSTRAFIRKLYENSRRSDKALRF 265
Query: 312 LALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRL--P 369
LVD+DP G+ I+S+Y GS + + L P + WLG+R SD+ R
Sbjct: 266 YGLVDNDPDGMAIMSIYKYGSMAHTNQNGRLNIPCLWWLGLRTSDVVSGAPSNDDRALNR 325
Query: 370 MTEQDIKTGKDLLEEDFVKKNPG----WVEELNLMVKTKQKAEIQALSSF 415
+T +D +L + V G W EL M+ KAEI+ L +
Sbjct: 326 LTVRDRTKIVTMLSNNPVWAAEGPELEWRAELQQMLMLNLKAEIEILYDW 375
>gi|403168183|ref|XP_003327852.2| hypothetical protein PGTG_08619 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167387|gb|EFP83433.2| hypothetical protein PGTG_08619 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 454
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 178/369 (48%), Gaps = 36/369 (9%)
Query: 55 NGASTSSSSSKPLTLSDLSLS-ATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQ 113
+ ST SS + +L S + AT +++ +L +Q + Q + G +
Sbjct: 76 DSVSTKSSDKQHGSLEKESGAVATLKKIEAFALDILQQINRSGKYQTLGACSPGGTMRRK 135
Query: 114 VP------SRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLR 167
+P R+S N PE R + + T R +S S +R+ + +++L L H L
Sbjct: 136 LPIIVLLKDRSSPN----PEKHRKLRFPRDT-RNRSSGSGIRELSQLLRVLELSHDAILG 190
Query: 168 NIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDN 227
+ +TKRD+FY DV LF+ Q D ++DD+A TR L+ A+ KG+ G L
Sbjct: 191 KMIMTKRDVFYNDVNLFKKQVVVDRLVDDLAATFEITRGQLHFAASPKGLFQGDLELVII 250
Query: 228 GDMIDCTKMGMGGKAIPPNIDRVGDMQ--SDAMFILLVEKDAAYIRLAEDRFYNRFPCII 285
GD I G G A+ P D + +++ + FIL+VEK+ +P +
Sbjct: 251 GDTITS---GHGPPALIPPEDTIKELKPGPNIRFILIVEKEGIG-----------YPSLS 296
Query: 286 VTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTP 345
+A+RL + ++ ++P+L LVD DP+GL I VY GS++MS+ L
Sbjct: 297 TRQ-----LASRLSEHQEVVKRRVPILILVDCDPHGLDIAKVYKFGSQSMSF-HPGLRAK 350
Query: 346 DIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQ 405
+W+GI SD +++ I PMT D K LL D + ++ W E+ M +T++
Sbjct: 351 QAEWIGISSSDWNEFNIDCDLICPMTLHDYKKADSLLMSDVLPES--WKNEVRRMKETRK 408
Query: 406 KAEIQALSS 414
K+EIQ L S
Sbjct: 409 KSEIQILCS 417
>gi|452824698|gb|EME31699.1| DNA topoisomerase [Galdieria sulphuraria]
Length = 364
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 142/304 (46%), Gaps = 40/304 (13%)
Query: 161 IHQLCLRNIHVTKRDLFY--------------------TDVKLFQDQTQSDAVLDDVACI 200
IH L ++ + +R LFY LF Q Q D + ++ +
Sbjct: 50 IHALLVQGSYANQRALFYEMRHLKMEYSVTNKSYSLTKHSSYLFPSQIQVDTTIRKISGL 109
Query: 201 LGCTRSSLNVIAAEKGVVVGRLIF---SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSD- 256
LG +R+ L++ KG + G + + + + IDC + G IP + + + + +
Sbjct: 110 LGSSRNELHIFPNSKGFLSGAIALVHHNSSSNAIDCLREFPDGWCIPGSTEYLNQFKFEN 169
Query: 257 --AMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLAL 314
A +I+++EK + RL EDRF + P I++ G P +AT+ +++ EL+LP L L
Sbjct: 170 LGAQYIVVIEKHGIFKRLLEDRFVHHLPSILICGLGYPSIATKFLFQRIARELRLPCLGL 229
Query: 315 VDSDPYGLKILSVYGCG--------SKNMSYDSANLTTP-DIKWLGIRPSDLDKYKIPEQ 365
VD +P+GL +L Y +S S +TP I WLG+ S L + + ++
Sbjct: 230 VDYNPHGLALLQTYRSSLAKEASDLDNQLSCSSWRESTPLHIYWLGLHFSQLSQLNLWDK 289
Query: 366 CRLPMTEQD---IKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSE 422
R P+T +D + ++ L+ + +ELN M K E+QA+ S G YLS
Sbjct: 290 FRKPLTRRDRVLLTKLRNQLQTKAGRNLAVLEQELNAM--QNGKVELQAIYSLGHSYLSR 347
Query: 423 VYLP 426
YLP
Sbjct: 348 TYLP 351
>gi|374630622|ref|ZP_09703007.1| Type 2 DNA topoisomerase 6 subunit A [Methanoplanus limicola DSM
2279]
gi|373908735|gb|EHQ36839.1| Type 2 DNA topoisomerase 6 subunit A [Methanoplanus limicola DSM
2279]
Length = 362
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 160/329 (48%), Gaps = 16/329 (4%)
Query: 114 VPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK 173
+P+R N Y + ++ T+R +S + ++ + N T
Sbjct: 35 LPTRTKKNIEYDENSEVWKYGNRETVRSASSAKSALHLLKMAHVVGFLKNQIADNRSSTL 94
Query: 174 RDLFYTDVKL----FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVV-GRLIFSDN- 227
R+++Y F Q +S+ +++D+ I +R + ++ E G + G L +
Sbjct: 95 REMYYISEGWKRAKFSAQDESNMLVEDLEIITELSREAFHLRPEEDGAAIYGPLRIKEQT 154
Query: 228 --GD-MIDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPC 283
G+ +I C + +G G IP N++ + + DA F++ +E Y RL E+ F
Sbjct: 155 RRGEKIIHCQEDVGEAGYPIPNNVNNLELIDHDAKFVIAMETGGMYARLMENGFDEEHNA 214
Query: 284 IIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLT 343
++V KGQP +TR L+++ EL LPV+ D DP+ +I + GS ++ S L
Sbjct: 215 VLVHLKGQPARSTRRVLKRLNSELGLPVVIFTDGDPWSYRIFASIAYGSIKAAHMSEILA 274
Query: 344 TPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGK-DLLEEDFVKKNPGWVEELNLMVK 402
TP +++G++PSD+ Y +P +TE DI K +L + F W +E+NL +K
Sbjct: 275 TPGAQFIGVQPSDISNYDLPAD---KLTEGDIAALKAELTDPRF--DTEYWRKEINLQLK 329
Query: 403 TKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
K+E QA +S G ++++ YLP +L +
Sbjct: 330 LGLKSEQQAFASRGLDFVTKDYLPDRLSE 358
>gi|402587435|gb|EJW81370.1| type IIB DNA topoisomerase [Wuchereria bancrofti]
Length = 350
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 144/278 (51%), Gaps = 9/278 (3%)
Query: 155 VKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAE 214
++ +S+IHQL + TKRDLFY LF +Q D+ ++ + C LG +S ++++
Sbjct: 73 LRTISMIHQLRILKTRKTKRDLFYEQKNLFGEQRNLDSCINRICCWLGVDPTSGYLLSSG 132
Query: 215 KGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAE 274
G+V+G+L + + DC+ KA + ++ + A IL+VEKDA + +L
Sbjct: 133 HGLVIGQLKICRSTGITDCSL-----KATLIDDFSDANLFTTAQCILVVEKDATFQKLIG 187
Query: 275 DRFYNRFP-CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSK 333
+ F FP ++VT +G PD+ATR+ L K+ LP+ L+D DP+G++I Y G+
Sbjct: 188 EGFLKLFPNTLLVTGRGYPDIATRILLNKLS---NLPLFGLLDCDPHGIEIAMTYKYGNC 244
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
+ ++ N T +W+G+ L K+ I LP+ ++ + L + + N
Sbjct: 245 SKTFGVKNQTLSHFEWIGLSRCKLPKFVISAVQFLPLQTSELVKVEKLCQRIAILGNTAL 304
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
++EL M + K E++A+S + + L KL +
Sbjct: 305 LDELIRMRQCSNKLELEAVSGIAPGSMCQYLLRTKLSK 342
>gi|33304618|gb|AAQ02689.1| meiosis-specific topoisomerase Spo11 [Sordaria macrospora]
Length = 481
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 128/217 (58%), Gaps = 10/217 (4%)
Query: 148 VRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSS 207
+R+ +I+ L H+ L +TKR+++Y +++LF+ Q+ D ++D++A LG R
Sbjct: 141 LRRFEALFRIIELSHEALLSGTLITKRNIYYQNMELFRSQSMVDEMVDNLAFTLGVGRGD 200
Query: 208 LNVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIP--PNIDRVGDMQSDAMFILLVE 264
LN++A KG++ G++ + G I+C + G +P ++++ D QS ++L++E
Sbjct: 201 LNIVATAKGLIAGQVQLMMRGGTSINCAESSDSGVLLPSISAVEKI-DFQS-VKWLLVIE 258
Query: 265 KDAAYIRLAEDRFY---NRFPCIIVTAKGQPDVATRLFLRKMK-MELKLPVLALVDSDPY 320
K+A + L+ R++ I+VT KG PD+ATR FL + ++ +LP+ ALVD D +
Sbjct: 259 KEATFRTLSASRYHAVSRAGSGILVTGKGYPDLATRKFLATLHFVQPRLPMFALVDFDTH 318
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL 357
G+ IL Y GS+ + ++ P ++WLGIR SD+
Sbjct: 319 GISILRTYQYGSQRLDHEE-RTKVPRLRWLGIRSSDV 354
>gi|225683482|gb|EEH21766.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 378
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 155/320 (48%), Gaps = 48/320 (15%)
Query: 137 TTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDD 196
T P ++ + I ++I+ I + N +KRD++Y D F Q+ D +DD
Sbjct: 80 TYFWPGKTVQEGWRFAILLRIMGHISEAIHGNFISSKRDIYYLDPVYFGSQSVVDRCIDD 139
Query: 197 VACILGCTRSSLNVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 255
+AC +G RS+L+V AA KG+ VGR + ++ ID G + P ++ V ++
Sbjct: 140 LACTIGVDRSALHVAAAAKGLAVGRFNVTLNDNSTIDADLHAEVGMLV-PRVETVKNVDL 198
Query: 256 DAM-FILLVEKDAAYIRLAEDRFYN---RFPCIIVTAKGQPDVATRLFLRKMKMELKL-- 309
A+ +IL++EK+A + RLA ++ P I++T KG PD+ TR FLR + L L
Sbjct: 199 SAVRWILVIEKEATFRRLATVNYHKTSAAGPGIMITGKGYPDLCTRAFLRLLSHTLPLPS 258
Query: 310 ----------PVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSD--- 356
P+ VDSDP G+ I+ DI+W G+R S+
Sbjct: 259 ALGTSPSSPPPIYMFVDSDPDGMAII--------------------DIQWFGLRSSEVVS 298
Query: 357 -LDKYKIPEQCRLPMTEQDIKTGKDLLEEDFV----KKNPGWVEELNLMVKTKQKAEIQA 411
LD + + +P+T +D K +D+L + V P W EL M+ + KAEI+
Sbjct: 299 RLDAHIQDDDVLIPLTLRDRKKAQDMLARNPVFAEDGPEPTWRAELQHMLMSNVKAEIEV 358
Query: 412 LSSFGFQYLSEVYLPLKLQQ 431
L + + E +L LKL++
Sbjct: 359 L--YEREEGVERWLDLKLRK 376
>gi|294495184|ref|YP_003541677.1| DNA topoisomerase (ATP-hydrolyzing) [Methanohalophilus mahii DSM
5219]
gi|292666183|gb|ADE36032.1| DNA topoisomerase (ATP-hydrolyzing) [Methanohalophilus mahii DSM
5219]
Length = 367
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 164/333 (49%), Gaps = 25/333 (7%)
Query: 113 QVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILS-LIHQLCLRNIHV 171
+PSR +N + D V + + R ++ + T +L L++ N
Sbjct: 38 NMPSRTKNNIEFNEISDVWVYGGRESERSAKTVKGAFQLLKTSHVLDFLLNNHIGNNRGS 97
Query: 172 TKRDLFYT----DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVV-GRLIFSD 226
T R+L+Y D+ F++Q +SD +++D+ I R ++ E G + G L +
Sbjct: 98 TLRELYYISENWDIAKFKEQPESDRLIEDLEIISSLQREYFHMRPEEDGATLFGPLQLRE 157
Query: 227 N---GDM-IDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF 281
GD I C + +G G IP N++ + + DA FI+ +E Y RL E+ F
Sbjct: 158 ETKRGDRDIHCQEDVGESGYQIPFNVENIDFIDHDAKFIIAIETGGMYARLIENGFDELN 217
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
I+V KGQP +TR +++M EL +PV+ D DP+ +I + G+ ++ S
Sbjct: 218 DAILVHLKGQPARSTRRMIKRMNEELGIPVVVFTDGDPWSYRIYASVAYGAIKSAHLSEF 277
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLL-----EEDFVKKNPGWVEE 396
+ TP K++G++PSD+ +Y++ +T++D+ + L E D+ W E+
Sbjct: 278 MATPAAKFVGVQPSDIVEYELSTD---KLTDKDVDALRSELTDPRFETDY------WKEQ 328
Query: 397 LNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
+NL + +KAE QA + G ++++ YLP +L
Sbjct: 329 INLQLDIGKKAEQQAFAGKGLDFVTKTYLPDRL 361
>gi|407925927|gb|EKG18901.1| Spo11/DNA topoisomerase VI subunit A [Macrophomina phaseolina MS6]
Length = 458
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 142/285 (49%), Gaps = 26/285 (9%)
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
T+ ++IL ++H+ + + ++KR+++Y LF Q D +DD+A G RS LNV
Sbjct: 163 TVLIRILEIVHEALITDRVISKREIYYRHPALFTTQVIVDRYIDDIAYTFGTYRSLLNVC 222
Query: 212 AAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIR 271
AA KG+V G + GD K+ + PN D G +Q+ A +IL+VEK+A +
Sbjct: 223 AAAKGLVSGPVSI-QKGDNTAFQKLDDHAGHLIPNNDGEGIIQTTAKWILVVEKEALFRS 281
Query: 272 LAEDRFYN--RFPCIIVTAKGQPDVATRLFLRKM-----KMELKLPVLALVDSDPYGLKI 324
++ + R ++VT KG PD++TR FLR++ +P+ ALVD DP GL I
Sbjct: 282 ISASSSWEVLRHQGVMVTGKGYPDLSTRAFLRQLCAASVTGHPHIPIYALVDFDPDGLSI 341
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGI--------RPSDLDKYKIPE-QCRLPMTEQDI 375
+ Y GS ++++ P ++WLG+ + S L + + Q L +T +D
Sbjct: 342 MCTYKYGSSALAHEGDAARLPSMQWLGVKSTQAFPPKSSGLTASSVHQNQGLLHLTHRDR 401
Query: 376 KTGKDLL------EEDFVKKNPGWVEELNLMVKTKQKAEIQALSS 414
K +L E D + EL +M+ KAE + L S
Sbjct: 402 KKAVSILCKACCCETDISHEI---ARELQIMLMLNLKAETELLES 443
>gi|452840859|gb|EME42796.1| hypothetical protein DOTSEDRAFT_131971 [Dothistroma septosporum
NZE10]
Length = 342
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 142/285 (49%), Gaps = 34/285 (11%)
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIA 212
+ ++IL L+H+ ++ ++KRD++Y D LF +QT D +DD+A G +R+SLNV A
Sbjct: 52 VVLRILELMHEALRNDVVMSKRDIYYRDPALFGNQTYVDRYVDDIALTFGLSRASLNVCA 111
Query: 213 AEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVG-------DMQSDAM----FIL 261
KG+V G T G + N DR G D+Q+ + +IL
Sbjct: 112 VAKGLVAGAF-----------TIYRKDGSSTIANNDREGLLVPSLRDIQAIDVKMVNWIL 160
Query: 262 LVEKDAAYIRLAEDRFYNRFPC--IIVTAKGQPDVATRLFLRKMKME------LKLPVLA 313
++EK+A + + F++ I++T KG PD++TR L + PV
Sbjct: 161 VIEKEATFRSITAGPFWDTIATQGIVLTGKGYPDLSTRALLHFLSTASPENGFASPPVYG 220
Query: 314 LVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL--DKYKI-PEQCRLPM 370
L D DP GL ILS Y GSK+++++S P ++WLG+R +L D+ Q L +
Sbjct: 221 LADFDPDGLSILSTYRRGSKSLAHESEAHCIPQLQWLGLRSENLYMDQANTHASQGLLKL 280
Query: 371 TEQDIKTGKDLL-EEDFVKKNPGWVEELNLMVKTKQKAEIQALSS 414
T +D K ++L D + W EL M+ KAE+Q L +
Sbjct: 281 TTRDRKKAVNMLVRNDDWEVPEEWKAELRTMLMLNTKAELQLLDA 325
>gi|325093817|gb|EGC47127.1| meiotic recombination protein spo11 [Ajellomyces capsulatus H88]
Length = 376
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 156/300 (52%), Gaps = 26/300 (8%)
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIA 212
+ ++IL I + + +KRD++Y D F Q+ D +DD+AC +G R++L+V A
Sbjct: 78 VLLRILGHISEAIRGDFISSKRDIYYLDPVYFGSQSVVDRCIDDIACTIGVDRTALHVAA 137
Query: 213 AEKGVVVGRLIFSDNGD-MIDCTKMGMGGKAIPPNIDRVGDMQSDAM-FILLVEKDAAYI 270
A KGVVVG + N D MID G + P ++ V + + + +IL++EK+A +
Sbjct: 138 AAKGVVVGTFNVTLNDDSMIDVAVHAEG--MLVPRVETVKKIDTSTIRWILVIEKEATFH 195
Query: 271 RLAEDRFYNRFPC---IIVTAKGQPDVATRLFLRKMKME----------LKLPVLALVDS 317
RLA ++ I++T KG PD++TR FL + + P+ LVD
Sbjct: 196 RLATVNYHTTSAAGSGILITGKGYPDISTRAFLHLLSRVPPSASGALPFRQPPIFMLVDG 255
Query: 318 DPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQ---CRLPMTEQD 374
DP G+ I+S Y GS+ ++D+ NL +++WLG++ S+L + Q +P+T +D
Sbjct: 256 DPDGMAIMSTYKYGSRAQAHDNTNLAVHNVQWLGLQASELVPSSLEIQGDDALIPLTSRD 315
Query: 375 IKTGKDLLEEDFV----KKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
K +D+L V P W EL M+ T KAEI+ L + + E +L KLQ
Sbjct: 316 RKKAQDMLGRSPVFAEDGPEPAWRRELQHMLMTNVKAEIEML--YEREGGIETWLDHKLQ 373
>gi|392593676|gb|EIW83001.1| DNA topoisomerase IV, alpha subunit, partial [Coniophora puteana
RWD-64-598 SS2]
Length = 298
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 142/271 (52%), Gaps = 23/271 (8%)
Query: 157 ILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKG 216
+L+L+H+ TKRD++Y DV+LF+ Q D ++DDVA RS +NV A KG
Sbjct: 6 VLNLVHEAISGGYTTTKRDIYYKDVELFKSQATVDRIVDDVAATFEAERSMMNVRATSKG 65
Query: 217 VVVGR--LIFSDNGDMIDCTKMGMGGKAIPPN--IDRVGDMQSDAMFILLVEKDAAYIRL 272
+++G I + D+I C+ + G IPP I+R D+ +IL+VEK+
Sbjct: 66 LLLGNGLEIHLTSKDVI-CSNVSE-GILIPPGEAIERF-DITEVPSWILIVEKEVT---- 118
Query: 273 AEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL--KLPVLALVDSDPYGLKILSVYGC 330
+ + I + KG PDVATR L+ L +P+LALVD DP+GL ILSVY
Sbjct: 119 ---KLSHCGQVIGLQGKGYPDVATRELLKTFGDNLPDSVPILALVDGDPHGLDILSVYKF 175
Query: 331 GSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQD-IKTGKDLLEEDFVKK 389
GS +M ++ L I+ +GI S+L + +P+T+QD K L+ + +
Sbjct: 176 GSASMKHEVDKLAANRIESVGIWGSELSDLGVGLSQLIPITKQDEAKEIMGYLQALAMLQ 235
Query: 390 NPG------WVEELNLMVKTKQKAEIQALSS 414
P W EL M+ ++KAEI+ L+S
Sbjct: 236 RPDSLMPSKWRSELARMLHLRRKAEIEVLTS 266
>gi|452981949|gb|EME81708.1| hypothetical protein MYCFIDRAFT_138655, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 361
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 155/306 (50%), Gaps = 22/306 (7%)
Query: 127 ELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK-RDLFYTDVKLFQ 185
E I L +T P S + + ++I+ L+H+ ++ ++K RD+FY D LF
Sbjct: 41 ESKNIKLPGRTLRFPGRSEDEAWRFAVVLRIMELLHEALRNDVVISKSRDMFYRDPALFG 100
Query: 186 DQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIP 244
Q D +DD+A G RS+LNV AA KG+ G + +G +ID ++ G IP
Sbjct: 101 SQKHVDRYVDDIAFTFGVPRSTLNVTAAAKGLFAGAFELCRRDGSVIDASE-DQEGTLIP 159
Query: 245 PNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF--PCIIVTAKGQPDVATRLFLR- 301
D + S +IL++EK+A + +A ++ II+T KG PD+++R LR
Sbjct: 160 SLKDILSVSMSKVKWILVIEKEATFRSIAGSELWSTIIRQGIIMTGKGYPDLSSRAMLRF 219
Query: 302 ----KMKMELKLP-VLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSD 356
++ P V L D DP G+ IL VY GSK ++++S + P+++WLG+R ++
Sbjct: 220 LSRPSLQNGFSSPLVYGLADFDPDGIAILCVYKHGSKALAHESRDHAAPEMEWLGLRSTN 279
Query: 357 LD---KYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW-----VEELNLMVKTKQKAE 408
L + Q L ++ +D K +L+++ +PG +EL M+ KAE
Sbjct: 280 LSLAARDVRTSQGLLTLSCRDRKKAVKMLDDN---HSPGAECVETAKELQTMLMLNMKAE 336
Query: 409 IQALSS 414
+Q L +
Sbjct: 337 LQFLDA 342
>gi|308810407|ref|XP_003082512.1| putative SPO11 protein (ISS) [Ostreococcus tauri]
gi|116060981|emb|CAL56369.1| putative SPO11 protein (ISS) [Ostreococcus tauri]
Length = 410
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 120/230 (52%), Gaps = 8/230 (3%)
Query: 187 QTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPP 245
+ Q A + ++ L R +L +IA KG+V GR I + +G DCT G
Sbjct: 162 EKQLQATIRKLSLALSAPRCALGIIATSKGMVCGRCHIETASGQRFDCTAEGWPISGDLF 221
Query: 246 NIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKM 305
+D + SDA ++++VEKDA + +L +R Y PC+++TAKG PDVATR FL ++
Sbjct: 222 ELDACS-IHSDAAYVIVVEKDAVFNKLCAERIYEYLPCVLITAKGYPDVATRKFLWLLET 280
Query: 306 ELK---LPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKI 362
L+ LVD +P+G IL+ Y GSK S D+A P + W+G+R DL +
Sbjct: 281 VLEGSGAKFFGLVDWNPHGAWILATYSSGSKRSSIDAAEFVVP-LTWIGLRSEDL--RDV 337
Query: 363 PEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQAL 412
+T +D ++ LE D + EEL +M +KA+I+AL
Sbjct: 338 AADAMQDLTTRDAALIRNALEGDDAHPLCSFREELRIMHDVGKKADIEAL 387
>gi|154151278|ref|YP_001404896.1| DNA topoisomerase VI subunit A [Methanoregula boonei 6A8]
gi|153999830|gb|ABS56253.1| Spo11/DNA topoisomerase VI, subunit A [Methanoregula boonei 6A8]
Length = 362
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 160/337 (47%), Gaps = 16/337 (4%)
Query: 106 AGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLC 165
AG+ S +P+R N Y + DK +LR A+ + ++ + Q
Sbjct: 27 AGDIPSISLPTRTKYNIEYDDASEVWKYGDKESLRTAATAKSATHLLKMAYVIGFVKQQL 86
Query: 166 LRNIHVTKRDLFYTDVKL----FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVG 220
+ N T R+++Y F Q +S+ +++D+ I R ++ E G + G
Sbjct: 87 IENRSSTLREMYYISEGWKRAKFGAQDESNFLVEDLEIISDVPREGFHLRPEENGASIYG 146
Query: 221 RLIFSD----NGDMIDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAED 275
+ + MI C +G G +IP N++ + + DA F++ +E Y RL E+
Sbjct: 147 PMRIREPTRRGLKMIHCQDDVGSAGYSIPNNVENLELVDHDAKFVIAMETGGMYDRLIEN 206
Query: 276 RFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNM 335
F I++ KGQP +TR L ++ LP+L D DP+ +I + G+
Sbjct: 207 GFDEEHNAILLHLKGQPARSTRRLLNRISQTWNLPILVFTDGDPWSYRIYASVAYGAIKS 266
Query: 336 SYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKT-GKDLLEEDFVKKNPGWV 394
++ S L TP ++LG++PSD+ Y +P ++++D++ +L + F W
Sbjct: 267 AHMSELLATPKAQFLGLQPSDIRDYNLPSD---KLSDKDVEALNAELTDPRFATDY--WK 321
Query: 395 EELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+++NL ++ K+E QA ++ G ++++ YLP +L +
Sbjct: 322 KQINLQLELGLKSEQQAFAARGLDFVTKKYLPARLSE 358
>gi|402081027|gb|EJT76172.1| meiosis-specific topoisomerase Spo11 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 433
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 113/212 (53%), Gaps = 31/212 (14%)
Query: 155 VKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAE 214
++IL + H+ L VTKR++FY D +LF+DQ DA++D++A LG R +LN+ AA
Sbjct: 129 IRILEIAHEALLTGKLVTKRNIFYQDKQLFRDQRTVDALVDNIALTLGVGRHALNIAAAG 188
Query: 215 KGVVVG--RLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQ-SDAMFILLVEKDAAYIR 271
KG+V G L D+G ++ C + P DR+ ++ S A +IL++EK+
Sbjct: 189 KGLVAGPISLTLDDDGSILPCDD-----ATLIPTPDRLRHVEWSRAQWILVIEKE----- 238
Query: 272 LAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELK-LPVLALVDSDPYGLKILSVYGC 330
KG PD+ TR FL + +PV LVD DPYG++IL Y
Sbjct: 239 ----------------GKGYPDLCTRRFLFSLHQSRPYIPVYGLVDYDPYGIRILRNYQR 282
Query: 331 GSKNMSYDSANLTTPDIKWLGIRPSDLDKYKI 362
GS N+ ++ + T I WLGIR +D+ Y +
Sbjct: 283 GSANLQHER-DCTVSTIHWLGIRLADIRSYHV 313
>gi|296808905|ref|XP_002844791.1| meiotic recombination protein spo11 [Arthroderma otae CBS 113480]
gi|238844274|gb|EEQ33936.1| meiotic recombination protein spo11 [Arthroderma otae CBS 113480]
Length = 387
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 133/286 (46%), Gaps = 37/286 (12%)
Query: 158 LSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV 217
LI + N +KRD+FY D F Q D +DD+A G R++L+V AA KG
Sbjct: 89 FGLISEAIDGNFTSSKRDIFYQDPVYFGSQKLVDRYVDDIAFTFGVDRAALHVTAAAKGA 148
Query: 218 VVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQ-SDAMFILLVEKDAAYIRLAED 275
+ G I NG I G P ID + + S +IL++EK+A Y RL
Sbjct: 149 IGGHFRIELKNGSSIQVEACAEG--ITIPRIDEIEKIDVSGISWILVIEKEAVYHRLVTS 206
Query: 276 RFYNRFPC---IIVTAKGQPDVATRLFLRKMKME----------------LKLPVLALVD 316
++ I++T KG PDV++R FLR + LPV LVD
Sbjct: 207 GYHKSSVAGNGILLTGKGYPDVSSREFLRLLSQSSNQESSFNLLAANPAFASLPVYILVD 266
Query: 317 SDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPE------QCRLPM 370
SDP G+ I+S Y GS + +A L P I+W+G+ S++ IP +PM
Sbjct: 267 SDPDGMAIMSTYKYGSMAQVHQNAYLNVPSIQWIGLYASEM----IPTVDFLNGSSLIPM 322
Query: 371 TEQDIKTGKDLLEED--FVKKN--PGWVEELNLMVKTKQKAEIQAL 412
+ +D K + +L + F + P W +EL ++ KAEI+ L
Sbjct: 323 SRRDRKKAEAMLNRNPCFAEDGPEPSWRKELQSLLVMNMKAEIEIL 368
>gi|308452846|ref|XP_003089203.1| hypothetical protein CRE_23242 [Caenorhabditis remanei]
gi|308241650|gb|EFO85602.1| hypothetical protein CRE_23242 [Caenorhabditis remanei]
Length = 458
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 143/273 (52%), Gaps = 12/273 (4%)
Query: 158 LSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV 217
L ++ L + TKR+LFY +++ Q D+ + + +L +RS+LNV+A +G+
Sbjct: 113 LHQVYDLLENDKKSTKRELFYEHKAIYEAQRNLDSSIRSICELLNESRSNLNVLACGRGI 172
Query: 218 VVGRLIF--SDNGDMIDCTKMG------MGGKAIPPNIDRVGDMQSDAMFILLVEKDAAY 269
+ G + F D G +ID + + P+ D S+A F+L+VEKD +
Sbjct: 173 LRGAITFLVEDVG-VIDARVQDVLITGKINANNMFPDSLLFSDQVSEAEFVLVVEKDTTF 231
Query: 270 IRLAEDRFYNRFP-CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVY 328
+L +++F FP I+VT+KG PD++TR L+ + + K P+ L D+DP+G++I Y
Sbjct: 232 QKLIDEKFQIMFPRGILVTSKGYPDISTRNVLKMLSEKRKFPIYGLFDADPHGIEIYLTY 291
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKI-PEQCRLPMTEQDIKTGKDLLEEDFV 387
G+ + + I+W+G+ P+D ++ I P QC LP+ D ++++
Sbjct: 292 KYGAAKETAEGRGAFVSSIQWIGLFPTDFKRFFIDPSQC-LPLLRSDFVKIENMIPRSIQ 350
Query: 388 KKNPGWVEELNLMVKTKQKAEIQALSSFGFQYL 420
EL+ M++ K E+++++ G +Y+
Sbjct: 351 LGECLVTRELDWMIQNAFKLELESINMCGPEYM 383
>gi|146324038|ref|XP_747937.2| meiosis-specific topoisomerase Spo11 [Aspergillus fumigatus Af293]
gi|129556354|gb|EAL85899.2| meiosis-specific topoisomerase Spo11, putative [Aspergillus
fumigatus Af293]
Length = 388
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 165/349 (47%), Gaps = 46/349 (13%)
Query: 89 VQSTIETLILQI--------ARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLR 140
VQ+ I+ ++++I R L S VP + L + ++ +L +
Sbjct: 42 VQTFIDNILIEILDELRTPDGRPTLTLKRRSRGVPRSINPENLALESEEKEILSSYSW-- 99
Query: 141 PFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACI 200
P + K T ++ LS+I + + V+KRD++Y+D F Q D ++DD+A
Sbjct: 100 PGTNAYEAWKFTAIIRGLSVIAEAIQAGLVVSKRDIYYSDPACFGSQQIVDTIIDDIAHT 159
Query: 201 LGCTRSSLNVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMF 259
+G R++LNV A KG+V G + + G+M+D + K + +
Sbjct: 160 IGVDRAALNVEAVAKGLVAGYYRLMTKTGEMVDAR---LSTKVVK--------------W 202
Query: 260 ILLVEKDAAYIRLAEDRFYNRFPC-IIVTAKGQPDVATRLFLRKMKMELK-LPV------ 311
+L++EK+A Y RL+ ++ R V KG PD++TR F+R++ E + LP
Sbjct: 203 VLILEKEAVYRRLSRSSYHTRAAAGKGVLGKGYPDLSTRAFVRRLLDETRHLPAEESPRF 262
Query: 312 LALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL----DKYKIPEQCR 367
ALVDSDP G+ I+S Y GS ++D+ L + WLG+R SD+ D + R
Sbjct: 263 YALVDSDPDGMAIMSTYKYGSMAHAHDNEKLNVSKLCWLGLRTSDVIGSADSFGDEAFIR 322
Query: 368 LPMTEQDIKTGKDLLEEDFVKKNPG----WVEELNLMVKTKQKAEIQAL 412
L + +D K +L + V G W EL M+ KAEI+ L
Sbjct: 323 LSL--RDRKKAVAMLSNNPVWAEDGPEQEWRAELQQMLMLNLKAEIEIL 369
>gi|291333323|gb|ADD93030.1| DNA topoisomerase VI subunit A [uncultured archaeon
MedDCM-OCT-S04-C246]
Length = 368
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 165/355 (46%), Gaps = 19/355 (5%)
Query: 89 VQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTV 148
V + ++ ++ +L G + +P R N + +L + R +LS+
Sbjct: 12 VIEALHSVAAEMHDKMLKGKPPAMTLPVRTKKNIQFDKKLQVYKYGKNKSTRDATALSSA 71
Query: 149 RKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKL----FQDQTQSDAVLDDVACILGCT 204
R ++ I I ++ T R+++Y F Q +S+ + +D+ + C
Sbjct: 72 RVLLRSLHITEFIEEMIDSGKSSTLREMYYISEGWGNGKFGTQNESNNLAEDLEIVTKCI 131
Query: 205 RSSLNVIAAEKGV-VVGRLIFSDN---GDM--IDCTK-MGMGGKAIPPNID--RVGDMQS 255
R + E G ++G + F + G+ I+C +G G +P N++ ++ ++
Sbjct: 132 REDFKLRPEEDGARIIGNVTFEEKNRKGEWMRINCRDDVGDSGYGVPYNVESEKLRLVEH 191
Query: 256 DAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 315
D F++ VE + RL E+ F C I+ KGQP +TR +++M E K P+L
Sbjct: 192 DIDFVMAVETGGMFDRLVENGFDEEARCAIIHLKGQPARSTRRIMKRMSDEWKKPILVFA 251
Query: 316 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 375
D DP+ +I + G+ ++ S L T + +LGI D+ Y +P +T+ D+
Sbjct: 252 DCDPWSFRIFASIAYGAIKTAHISEYLATNEAIYLGITADDILAYDLPSD---DLTKSDL 308
Query: 376 KT-GKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
+L + F W E++NLM + +KAE Q+L+ +G ++++ YLP KL
Sbjct: 309 GALESELSDPRFA--TGWWKEQINLMQEIGKKAEQQSLAKYGLDFVTDTYLPEKL 361
>gi|392577766|gb|EIW70895.1| hypothetical protein TREMEDRAFT_61408 [Tremella mesenterica DSM
1558]
Length = 562
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 143/273 (52%), Gaps = 20/273 (7%)
Query: 155 VKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAE 214
++I SL+++ L + +TKRD++Y DV LF+ Q D ++DD+ G R NV A+
Sbjct: 266 LRISSLLYEAILTDCVMTKRDIYYKDVGLFKTQAVVDKLVDDLVATAGLKRRDFNVCASA 325
Query: 215 KGVVVG---RLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAY-I 270
KG+ RL+ NG+ I + IPP ++V + ++L++EKD +
Sbjct: 326 KGLASSSSLRLVLK-NGEQIVLSP--STASLIPP-AEKVQALVGKVEWVLVIEKDTCLGM 381
Query: 271 RLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVL---ALVDSDPYGLKILSV 327
+L ED P ++VT KG PD+AT L V+ ALVD+DP+GL ILSV
Sbjct: 382 KLLEDNGLG--PGMLVTGKGYPDLATIQLLHLASETFPKQVVKFHALVDADPHGLDILSV 439
Query: 328 YGCGSKNMSY--DSANLTTPD-IKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
Y GS+ Y + A+L + ++WLG++ SD + L +T++D++ +L
Sbjct: 440 YTYGSEATRYSVEHADLALGERLQWLGVKASDWISAGVAYDDLLELTDKDVQKAMSMLRS 499
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQA-LSSFG 416
D + W EL M+ +KAEIQ L+S G
Sbjct: 500 DIPSE---WKRELAHMLHLNRKAEIQVILTSLG 529
>gi|341880361|gb|EGT36296.1| hypothetical protein CAEBREN_28993 [Caenorhabditis brenneri]
Length = 429
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 156/310 (50%), Gaps = 11/310 (3%)
Query: 118 ASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQ---LCLRNIHVTKR 174
A N+ L ++VL+ F + R + L +HQ L + TKR
Sbjct: 43 ADINEQLKKNLKQLVLRTSNNKSDFFLRYSTRMKKKLDRDLHCLHQVYDLLENDKKSTKR 102
Query: 175 DLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIF--SDNGDMID 232
+LFY +++ Q D+ + + +L RS+LN+++ +G++ G + F D G +ID
Sbjct: 103 ELFYEHKSIYEVQRNLDSSIKSICELLDENRSNLNILSCGRGILRGAITFLVKDVG-VID 161
Query: 233 CTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFP-CIIVTAKGQ 291
+ + + ++ S+A FIL+VEKD + +L ++ F FP I+VT+KG
Sbjct: 162 ARVQ----EVLITDALLHSELISEANFILVVEKDTTFQKLIDENFQQMFPRGILVTSKGY 217
Query: 292 PDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLG 351
PD+ATR ++ + + K P+ L D+DP+G++I Y G+ S + P I+W+G
Sbjct: 218 PDIATRNVIKMLSDKKKFPIYGLFDADPHGIEIYLTYKYGAIKESAEGRGAFVPSIQWIG 277
Query: 352 IRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQA 411
+ P+D +++ I + L + DI ++L+ EL+ MV+ K E++A
Sbjct: 278 LFPTDYNRFIIDQTQCLKLKRTDIVKVENLVPRSIQLGESIVTRELDWMVQHSFKMELEA 337
Query: 412 LSSFGFQYLS 421
++ G +Y+S
Sbjct: 338 INMCGPEYMS 347
>gi|395645300|ref|ZP_10433160.1| Type 2 DNA topoisomerase 6 subunit A [Methanofollis liminatans DSM
4140]
gi|395442040|gb|EJG06797.1| Type 2 DNA topoisomerase 6 subunit A [Methanofollis liminatans DSM
4140]
Length = 363
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 158/335 (47%), Gaps = 22/335 (6%)
Query: 111 SFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVK---ILSLIHQLCLR 167
S +P+R N Y + D+ ++R S T + ++ +K ++ + Q
Sbjct: 33 SISLPTRTKHNIEYDDASEVWKYGDRESVR---SAQTAKGASHLLKMAYVIGFLKQQLAE 89
Query: 168 NIHVTKRDLFYTDVKL----FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV-VVGRL 222
N T R+++Y F Q +S+ V++D+ + R ++ E G + G +
Sbjct: 90 NRSSTLREMYYISEGWKGAKFGAQDESNRVVEDLEILTDIQREIYHLRPEEDGASIFGPI 149
Query: 223 IFSDNG----DMIDCT-KMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRF 277
+ I C +G G IP N+D + + DA F++ +E Y RL E+ F
Sbjct: 150 RIREKTRRGVQEIHCQDNVGETGYQIPNNVDALEFLDHDAKFVIALETGGMYARLIENGF 209
Query: 278 YNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSY 337
+ +V KGQP +TR L+++ E LPV+ D DP+ +I + GS ++
Sbjct: 210 DEEYGAALVHLKGQPARSTRRLLKRIHEEFGLPVVVFTDGDPWSYRIYASVAYGSIKAAH 269
Query: 338 DSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGK-DLLEEDFVKKNPGWVEE 396
S L TP +++G++PSD+ Y +P ++EQD+ K +L + F W E+
Sbjct: 270 MSELLATPQAQFIGVQPSDIRDYDLPADH---LSEQDVAALKAELTDPRFATDY--WREQ 324
Query: 397 LNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
+ L ++ K+E QA ++ G +++ YLP +L +
Sbjct: 325 IALQLQMGLKSEQQAFAARGLDFVTREYLPARLSE 359
>gi|341880355|gb|EGT36290.1| hypothetical protein CAEBREN_32646 [Caenorhabditis brenneri]
Length = 426
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 156/310 (50%), Gaps = 11/310 (3%)
Query: 118 ASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQ---LCLRNIHVTKR 174
A N+ L ++VL+ F + R + L +HQ L + TKR
Sbjct: 43 ADINEQLKKNLKQLVLRTSNNKSDFFLRYSTRMKKKLDRDLHCLHQVYDLLENDKKSTKR 102
Query: 175 DLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIF--SDNGDMID 232
+LFY +++ Q D+ + + +L +RS+LN+++ +G++ G + F D G +ID
Sbjct: 103 ELFYEHKSIYEVQRNLDSSIKSICELLDESRSNLNILSCGRGILRGAITFLVKDVG-VID 161
Query: 233 CTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFP-CIIVTAKGQ 291
+ + + ++ S+A FIL+VEKD + +L ++ F FP I+VT+KG
Sbjct: 162 ARVQ----EVLITDALLHSELISEANFILVVEKDTTFQKLIDENFQQMFPRGILVTSKGY 217
Query: 292 PDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLG 351
PD+ATR ++ + + K P+ L D+DP+G++I Y G+ S + P I+W+G
Sbjct: 218 PDIATRNVIKMLSDKKKFPIYGLFDADPHGIEIYLTYKYGAIKESAEGRGAFVPSIQWIG 277
Query: 352 IRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQA 411
+ P+D +++ I L + DI ++L+ EL+ MV+ K E++A
Sbjct: 278 LFPTDYNRFIIDRTQCLKLKRTDIVKVENLVPRSIQLGESIVTRELDWMVQHSFKMELEA 337
Query: 412 LSSFGFQYLS 421
++ G +Y+S
Sbjct: 338 INMCGPEYMS 347
>gi|189207094|ref|XP_001939881.1| meiosis-specific topoisomerase Spo11 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187975974|gb|EDU42600.1| meiosis-specific topoisomerase Spo11 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 435
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 145/302 (48%), Gaps = 52/302 (17%)
Query: 134 KDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAV 193
K++ P AS T+ ++IL LIH + + +TKRD++Y LF Q+ D
Sbjct: 137 KERDINFPGASAQEAWNFTVLLRILELIHGGLVDDTMMTKRDIYYRHPDLFVRQSVVDRY 196
Query: 194 LDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDM 253
+DD+AC G TRS LNV G++V I +N D +D
Sbjct: 197 VDDLACTFGITRSQLNV-----GMLVP--IVGEN-DTLDL-------------------- 228
Query: 254 QSDAMFILLVEKDAAYIRLAEDRFYNRFPC--IIVTAKGQPDVATRLFLRKM-KMELKLP 310
S+ ++L++EK+A + L + +I+TAKG PDVA+R FLR+M +P
Sbjct: 229 -SEVHWVLVIEKEATFRSLMASPQWGSLGSYGVILTAKGYPDVASRNFLRQMVDCAPHVP 287
Query: 311 VLALVDSDPYGLKILSVYGCGSKNMSY------DSANLTTPDIKWLGIRPSDLDKYKIPE 364
+ VD DP G+ ILS Y GS +++ D+ ++ P+I+WLG++ + + + E
Sbjct: 288 MYVFVDLDPEGIAILSTYKYGSYRLAHEAVTPTDTPAISLPNIRWLGVKSHHMSRTPVGE 347
Query: 365 -----------QCRLPMTEQDIKTGKDLLEEDFVKKN---PGWVEELNLMVKTKQKAEIQ 410
Q + +T +D +LE + ++ GW +EL M+ KAE+Q
Sbjct: 348 DDTEPSAMPQLQGLMKLTARDRTKAARMLEWNLCAEDGPEQGWRQELQKMLMFNIKAEMQ 407
Query: 411 AL 412
L
Sbjct: 408 IL 409
>gi|255076643|ref|XP_002501996.1| type II DNA topoisomerase VI subunit A 1 [Micromonas sp. RCC299]
gi|226517261|gb|ACO63254.1| type II DNA topoisomerase VI subunit A 1 [Micromonas sp. RCC299]
Length = 430
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 140/288 (48%), Gaps = 41/288 (14%)
Query: 157 ILSLIHQLCLRNIHVTKRDLFY------TDVKLFQDQTQSDAVLDDVACILGCTRSSLNV 210
+L+ H RN VT+R L+Y LF D ++ L D ++ +R SL V
Sbjct: 125 MLASSHAHLRRNEKVTQRGLYYLMSSGAHTSSLFPDPATVNSALLDSVSLVAVSRRSLGV 184
Query: 211 IAAEKGVVVGRLIFSDNGD-----MIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEK 265
+AA +G V G + + D + D ++ G A + GD + ++L+VEK
Sbjct: 185 VAAPRGEVGGAMSIREGEDAPWRSLWDESRQISGDIAAIARWEFRGDFR----YVLVVEK 240
Query: 266 DAAYIRL-AEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKM-ELKLPVLALVDSDPYGLK 323
+ + RL AE+R + R PC++VTAKG PD+ATR FL+++++ +P L LVD +P G+
Sbjct: 241 HSVFHRLFAEERVHTRLPCVVVTAKGFPDLATRAFLKRLQLTHPHVPFLGLVDWNPSGVL 300
Query: 324 ILSVYGCGSKNMS--YDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDL 381
IL Y G + S +S+ ++KWLG+R +DL R+P+T+ D + +
Sbjct: 301 ILGTYRAGGRTSSAVLESSRYAL-ELKWLGVRSADL----ATNPARIPLTDLDRAKARTM 355
Query: 382 LEEDFVKKN-----------------PGWVEELNLMVKTKQKAEIQAL 412
L D + + EL M T KAEI++L
Sbjct: 356 LRADGARLDGDTAGDESTDASTERLQSARARELTAMCATGFKAEIESL 403
>gi|119183419|ref|XP_001242749.1| hypothetical protein CIMG_06645 [Coccidioides immitis RS]
Length = 354
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 137/289 (47%), Gaps = 50/289 (17%)
Query: 141 PFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACI 200
P +++ K + ++IL I + +KRD++Y D F Q D +DD+A
Sbjct: 82 PGKTVTDAWKFGVIMRILGHISEAIEGKFISSKRDIYYLDPAYFGSQRLVDGYIDDIAYT 141
Query: 201 LGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFI 260
+G R++L+V G IP + VG S +I
Sbjct: 142 VGVDRAALHV-----------------------------GILIPRAHEIVGFDLSGVRWI 172
Query: 261 LLVEKDAAYIRLAEDRFYNRFPC---IIVTAKGQPDVATRLFLRKMKMELK------LPV 311
L++EK+A + RLA ++ I++T KG PD++TR FLR + E + +P+
Sbjct: 173 LIIEKEAVFHRLATSNYHATSAAGGGILITGKGYPDLSTRAFLRSIS-EWRNSPARFIPI 231
Query: 312 LALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIP-----EQC 366
LVD DP G+ I+S Y GS + S+++ANL P ++WLG+R SD IP ++
Sbjct: 232 YVLVDCDPDGMAIMSTYKYGSISQSHENANLNVPGVEWLGLRASDT---AIPGNADVDRP 288
Query: 367 RLPMTEQDIKTGKDLLEEDFV---KKNPGWVEELNLMVKTKQKAEIQAL 412
+PMT +D + +L + ++ W EL M+ KAEI+ L
Sbjct: 289 LIPMTLRDRTRAQAMLSHSVIFSDEREQEWRLELQRMLMVNAKAEIEVL 337
>gi|408397704|gb|EKJ76844.1| hypothetical protein FPSE_03030 [Fusarium pseudograminearum CS3096]
Length = 387
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 142/282 (50%), Gaps = 41/282 (14%)
Query: 81 VTDLSLSAVQSTIETLILQIARSILAGN----GFSFQVPSRASSNQLYVPELDRIVLKDK 136
+ + ++ AV S IE ++ QI ++ AG FS + PSR +SN PE ++K
Sbjct: 39 IHNTNVGAVVSRIEGILEQIIDALAAGQELSIAFSTRKPSRQASNA--TPEQVHFPGRNK 96
Query: 137 TTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDD 196
FA + + IL L H + +TKR +FY LF+ Q + D ++DD
Sbjct: 97 QEATKFARI---------LLILQLSHDALVSGTVLTKRHIFYQHQDLFEKQREVDDLVDD 147
Query: 197 VACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSD 256
+A LG +R +LN++AA KGV+ G L + D G + P + GD+
Sbjct: 148 IAFTLGISRGNLNIVAASKGVLAGPLTIG----LYD-------GSTLNPCL---GDL--- 190
Query: 257 AMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALV 315
A+F L + L+ P ++VTAKG PD+ TR FL + +LP+L L
Sbjct: 191 AVFRSLCSSQFWRVSLSG-------PGVLVTAKGYPDLTTRSFLNLVSTRYPQLPILGLF 243
Query: 316 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL 357
D DP G+KI+ Y GS +S++ A+L T ++WLGI+ + L
Sbjct: 244 DFDPDGVKIMRCYRYGSDRLSHE-ADLGTETLQWLGIKSTHL 284
>gi|219852783|ref|YP_002467215.1| DNA topoisomerase VI subunit A [Methanosphaerula palustris E1-9c]
gi|219547042|gb|ACL17492.1| DNA topoisomerase (ATP-hydrolyzing) [Methanosphaerula palustris
E1-9c]
Length = 362
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 167/362 (46%), Gaps = 18/362 (4%)
Query: 84 LSLSAVQSTIETLILQIARS----ILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTL 139
+S A+ + +L+IA + ++ G S +P+R N + + ++ +L
Sbjct: 1 MSKEALDAQARQELLRIAEAWYDQMVGGVVPSISLPTRTKQNLAFDETSEVWKYGERESL 60
Query: 140 RPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKL----FQDQTQSDAVLD 195
R S + ++ + Q + N T R+++Y F Q +S+ +++
Sbjct: 61 RSAHSAKSALHLLKMSYVIGFLKQQLIENRSSTLREMYYISEGWKKAKFHAQDESNLLIE 120
Query: 196 DVACILGCTRSSLNVIAAEKGVVVGRLI----FSDNG-DMIDCTK-MGMGGKAIPPNIDR 249
D+ + R + ++ E G V I + G I C + +G G AIP N++
Sbjct: 121 DLEILTMLQREAFHLRPEEDGATVFGPIRLKEMTRRGVKEIHCQEDVGEAGYAIPNNVEN 180
Query: 250 VGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKL 309
+ + DA F++ +E Y RL E+ F + ++V KGQP +TR L + + KL
Sbjct: 181 LEFVDHDAKFVIAIETGGMYARLQENGFDEEYGAVLVHLKGQPARSTRRVLHMIHEKFKL 240
Query: 310 PVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLP 369
P+ D DP+ +I + GS ++ S L TP +++G++PSD+ Y +P
Sbjct: 241 PITVFTDGDPWSYRIYASVAYGSIKSAHMSELLATPQAQFIGVQPSDISDYDLPSDT--- 297
Query: 370 MTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
++E+D+ K L D W ++ ++ K+E QA ++ G Y+++ YLP +L
Sbjct: 298 LSERDVLALKSEL-SDPRFDTEYWRYQIGRQLEIGIKSEQQAFAARGLDYVTKEYLPARL 356
Query: 430 QQ 431
+
Sbjct: 357 SE 358
>gi|308491496|ref|XP_003107939.1| CRE-SPO-11 protein [Caenorhabditis remanei]
gi|308249886|gb|EFO93838.1| CRE-SPO-11 protein [Caenorhabditis remanei]
Length = 448
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 144/267 (53%), Gaps = 10/267 (3%)
Query: 158 LSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV 217
L ++ L + TKR+LFY +++ Q D+ + + +L +R++LNV+A +G+
Sbjct: 113 LHQVYDLLENDKKSTKRELFYEHKAIYEAQRNLDSSIRSICELLNESRANLNVLACGRGI 172
Query: 218 VVGRLIF--SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAED 275
+ G + F D G +ID + I ++ D S+A F+L+VEKD + +L ++
Sbjct: 173 LRGAITFLVEDVG-VIDARVQDV---LITDSL-LFSDQVSEAEFVLVVEKDTTFQKLIDE 227
Query: 276 RFYNRFP-CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKN 334
+F FP I+VT+KG PD++TR L+ + + KLP+ L D+DP+G++I Y G+
Sbjct: 228 KFQIMFPRGILVTSKGYPDISTRNVLKMLSEKRKLPIYGLFDADPHGIEIYLTYKYGAAK 287
Query: 335 MSYDSANLTTPDIKWLGIRPSDLDKYKI-PEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
+ + I+W+G+ P+D ++ I P QC LP+ D ++++
Sbjct: 288 ETAEGRGAFVSSIQWIGLFPTDFKRFFIDPSQC-LPLLRSDFVKIENMIPRSIQLGECLV 346
Query: 394 VEELNLMVKTKQKAEIQALSSFGFQYL 420
EL+ M++ K E+++++ G +Y+
Sbjct: 347 TRELDWMIQNAFKLELESINMCGPEYM 373
>gi|367024897|ref|XP_003661733.1| hypothetical protein MYCTH_45107 [Myceliophthora thermophila ATCC
42464]
gi|347009001|gb|AEO56488.1| hypothetical protein MYCTH_45107 [Myceliophthora thermophila ATCC
42464]
Length = 443
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 197/443 (44%), Gaps = 81/443 (18%)
Query: 43 FLAATTTTTAAANGASTSSSSSKPLTLSDLSLSATCREVTDLSLSAVQSTIETLILQIAR 102
L+A+ AN S+ + + + ++ S ++ S IE L+ I
Sbjct: 1 MLSASRAQQKPANNTHIPHPHSRQPSSVSFAAESDLVQIPFGSRTSALSRIEELLESIVD 60
Query: 103 SILAGNGFSFQVPS-RASSNQL-YVPEL--DRIVLKDKTTLRPFASLSTVRKSTITVKIL 158
+I N + + R+S N + P+ DR+ P ++ V+K +I+
Sbjct: 61 AITHDNELTIPYETVRSSQNGAEFEPQFGSDRVA---NVVRFPGRTIQEVKKFEALFRII 117
Query: 159 SLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVV 218
+ H+ L +TKR+++Y + +LF+ Q+ D ++D++A LG R LN++A KG++
Sbjct: 118 EMSHEALLSGKLITKRNIYYQNPELFKSQSAVDDMVDNLAFTLGVGREDLNIVATAKGLI 177
Query: 219 VG--RLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAM-FILLVEKDAAYIRLAED 275
G LI D G + C G + P+++ + + + ++L++EK+A + LA
Sbjct: 178 SGPIDLILRD-GSIHSCDSASDTGILL-PSVNLITKINFGLIRWVLVIEKEATFRTLAAA 235
Query: 276 RFYNRFP----CIIVTAKGQPDVATRLF---LRKMKMELKLPVLALVDSDPYGLKILSVY 328
+ Y+R I++TAKG PD+ATR F L ++ EL L ALVD DP+G+ I+ Y
Sbjct: 236 K-YSRTSRAGQGILLTAKGYPDLATRRFLFLLHSVRPELSL--FALVDFDPHGIAIMRTY 292
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDLD---KYKIPEQCR------------------ 367
GS+ + ++ N P ++WLG+ D+ K P C
Sbjct: 293 KHGSQRLEHEQ-NAAVPCLQWLGLHSGDVIMNLPAKYPSACDSIQNQDSQQPASQESAEY 351
Query: 368 --------------------------LPMTEQDIKTGKDLLEEDFVKKNPG--------W 393
+P+TE+D K ++ E + NPG
Sbjct: 352 LISDSRREKPMKRARHSKEQESSESIIPLTERDRKKAVQVMREIW---NPGNMTEEGADQ 408
Query: 394 VEELNLMVKTKQKAEIQALSSFG 416
V EL M+ KAEIQA+ S+G
Sbjct: 409 VRELQRMLMLNVKAEIQAVDSYG 431
>gi|17542064|ref|NP_502081.1| Protein SPO-11 [Caenorhabditis elegans]
gi|3025217|sp|Q22236.1|SPO11_CAEEL RecName: Full=Meiotic recombination protein spo-11
gi|3879464|emb|CAA92974.1| Protein SPO-11 [Caenorhabditis elegans]
Length = 425
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 139/266 (52%), Gaps = 6/266 (2%)
Query: 158 LSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV 217
L ++ L + TKR+L+Y ++ +Q D+ + + +L +R++LN+++ +G+
Sbjct: 99 LHQVYDLLENDKRSTKRELYYEHKAVYGNQKYLDSSIKSICELLNESRANLNILSCGRGI 158
Query: 218 VVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDR 276
+ G + F +N +ID + + + ++ S+A FIL+VEKD + +L ++
Sbjct: 159 IRGAITFLVENVGVIDARVQ----EVLITDALLFSNIISEADFILVVEKDTTFQKLMDEN 214
Query: 277 FYNRFP-CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNM 335
F FP I+ T+KG PD+ATR L+ + + K P+ L D+DP+G++I Y G
Sbjct: 215 FQAMFPRGILATSKGYPDIATRNVLKMLSEKRKFPIYGLFDADPHGIEIYLTYKYGPTKE 274
Query: 336 SYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVE 395
+ P I+W+G+ P+D ++ I + LP+ D + ++
Sbjct: 275 FAEGRGAFVPTIEWIGLFPTDFHRFTIDQSQCLPLVRTDFVKIEKMIPRSIQLGEIVVTR 334
Query: 396 ELNLMVKTKQKAEIQALSSFGFQYLS 421
EL+ M++ K K E+++++ G +Y++
Sbjct: 335 ELDWMIQNKFKMELESINMCGQEYMA 360
>gi|358056024|dbj|GAA98369.1| hypothetical protein E5Q_05055 [Mixia osmundae IAM 14324]
Length = 425
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 138/250 (55%), Gaps = 28/250 (11%)
Query: 171 VTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIF-SDNGD 229
VTKR+L+Y D +LFQ Q D ++D +A + TR +N++AA KG+ G L+ S G
Sbjct: 150 VTKRELYYADPQLFQRQKTVDRLVDPLAHTIDRTRFDINIVAAAKGLFAGALVLTSSEGT 209
Query: 230 MIDCTKMGMGGKAIPP-----NIDRVGDMQSDAMFILLVEKDAAYIRLAE---DRFYNRF 281
M+D + G IPP +ID + +A +++++EK+A + LA +
Sbjct: 210 MLDG-RGSTTGCLIPPAELVSSIDIL-----NARWVIVLEKEAVFRSLAHLLPMLEADHG 263
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELK-LPVLALVDSDPYGLKILSVYGCGSKNMSYDSA 340
P II+T +G D+ATR + ++ E + L + ALVD DP+G+ IL+ Y G+ S +A
Sbjct: 264 PGIIITGRGYADLATRSLIARISREDRLLTIAALVDGDPHGIDILACYRHGTLRHSGKAA 323
Query: 341 NLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLE----EDFVKKNPGWVEE 396
+L P + WLG+R +DLD+ + LP+TE+D + +L +D VK +E
Sbjct: 324 DLVCPRMIWLGLRQNDLDECSLVRW--LPLTERDRRLATSMLARPTLDDEVK------QE 375
Query: 397 LNLMVKTKQK 406
L+ M+ +K
Sbjct: 376 LSRMLWNHRK 385
>gi|346318300|gb|EGX87904.1| meiotic recombination protein spo11 [Cordyceps militaris CM01]
Length = 301
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 144/287 (50%), Gaps = 32/287 (11%)
Query: 158 LSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGV 217
+ L HQ +TKR ++Y +LF+ Q D ++DD+A L R +L++ ++ KG
Sbjct: 1 MQLAHQAMTTGTILTKRHIYYQHQELFETQRVVDELVDDLAYTLDTDRDNLHITSSSKGS 60
Query: 218 VVGRLIFS-DNGDMIDCTKMGMGGKAIP--PNIDRVGDMQSDAMFILLVEKDAAYIRLAE 274
V G +I +G+++D ++ + G A+P ++ R+ DA ++L+VEKDA + L
Sbjct: 61 VSGCMIIHLRSGEVVDASENEL-GTAVPFSRSVSRI--EARDARWLLVVEKDAVFRSLVA 117
Query: 275 DRFYNR---FPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKILSVYGC 330
RF+ I+VTA+G PD+ TR FL K++ E LP+L L D DP GL I S Y
Sbjct: 118 VRFWETSLAGSGILVTARGYPDLMTRSFLTKIEAECPHLPMLVLSDFDPDGLSIFSCYRY 177
Query: 331 GSKNMSYDSANLTTPDIKWLGIRPSDLDKYK----------------IPEQCRLPMTEQD 374
G+ N S++S+N+ + WLGI+ L + C + +T +D
Sbjct: 178 GTTNFSHESSNVRI-NFGWLGIQSGHLGTLHNNRLASGAGSSAQTGVWSDNCLVNLTIRD 236
Query: 375 IKTGKDLLEEDFVKKNPGWVE-----ELNLMVKTKQKAEIQALSSFG 416
+L + F + + + EL +M+ KAEIQ L G
Sbjct: 237 RLCAFRMLRKSFDAGDGDFEQILMRRELQIMLMLGTKAEIQFLDDSG 283
>gi|194704998|gb|ACF86583.1| unknown [Zea mays]
Length = 212
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 120/250 (48%), Gaps = 47/250 (18%)
Query: 183 LFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKA 242
+F + D ++D+ + C+R +LNV+ KG+V+G + F + + C +
Sbjct: 5 IFVEVAVVDRAINDICILFKCSRHNLNVVPVVKGLVMGWIRFMEGEKKVYCITSVNAAFS 64
Query: 243 IPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRK 302
IP +I+ + D+ S A +IL+VEK+ + RLA D+F R CI++T
Sbjct: 65 IPVDIEAIKDVVSVAHYILVVEKETVFQRLANDKFCERNRCIVIT--------------- 109
Query: 303 MKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKI 362
+++D+ L PDI+WLG+ SD ++Y +
Sbjct: 110 -------------------------------QLAHDANLLRVPDIRWLGVFTSDFEEYCL 138
Query: 363 PEQCRLPMTEQDIKTGKDLLEEDFVKKN-PGWVEELNLMVKTKQKAEIQALSSFGFQYLS 421
P+ C L ++ +D + + +L ++ + P W EL M++ K EI+ALS+ +LS
Sbjct: 139 PDCCLLRLSPEDRRKAEGILARCYLHREAPEWRSELEAMLQKGVKFEIEALSANSISFLS 198
Query: 422 EVYLPLKLQQ 431
Y+P K++Q
Sbjct: 199 HEYIPQKIKQ 208
>gi|433426699|ref|ZP_20406922.1| DNA topoisomerase VI subunit A, partial [Haloferax sp. BAB2207]
gi|432196864|gb|ELK53285.1| DNA topoisomerase VI subunit A, partial [Haloferax sp. BAB2207]
Length = 192
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 4/194 (2%)
Query: 236 MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVA 295
+G GG IP N D + ++ D F++ VE RL E+ F + + ++V GQP A
Sbjct: 3 VGQGGYQIPNNPDTIEFLEHDVEFVMCVETGGMRDRLVENGFDDDYNALVVHLGGQPARA 62
Query: 296 TRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPS 355
TR +++ EL LPV+ D DP+ +I GS ++ S L TPD K++GI+P
Sbjct: 63 TRRITKRLHDELDLPVVVFTDGDPWSYRIFGSVAYGSIKSAHLSEYLATPDAKFVGIQPQ 122
Query: 356 DLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSF 415
D+ Y +P P+ + DI + LE+ + W E++ L + +KAE QAL+S
Sbjct: 123 DIVDYDLPTD---PLADSDINALESELEDPRFMGD-YWTEQIELQLDIGKKAEQQALASR 178
Query: 416 GFQYLSEVYLPLKL 429
G ++++ YLP +L
Sbjct: 179 GLDFVTDEYLPTRL 192
>gi|432328235|ref|YP_007246379.1| DNA topoisomerase VI, subunit A [Aciduliprofundum sp. MAR08-339]
gi|432134944|gb|AGB04213.1| DNA topoisomerase VI, subunit A [Aciduliprofundum sp. MAR08-339]
Length = 362
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 148/291 (50%), Gaps = 17/291 (5%)
Query: 154 TVKILSLIHQLCLRNIHVTKRDLFYTD----VKLFQDQTQSDAVLDDVACILGCTRSSLN 209
T+ ++ I ++ T R+++Y + F Q +S+ + +D+ I G R
Sbjct: 71 TLYVMEFIKEMIRDKKSSTLREMYYISEGWGLAKFHSQDESNKLAEDLEVITGFMREDFK 130
Query: 210 VIAAEKGV-VVGRLIFSDNGD-----MIDCTK-MGMGGKAIPPNI--DRVGDMQSDAMFI 260
+ E G ++G + + I+C +G G IP N+ D++ + DA F+
Sbjct: 131 LRPEEDGASIIGNITIEEINRKGKPMRINCRDDVGDSGYLIPYNVENDKLRFVDVDADFV 190
Query: 261 LLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
+ +E + RL E+ F + I+V KGQP +TR L++M EL LPV+ D DP+
Sbjct: 191 IGIETGGMFDRLVENGFDEKARAILVHIKGQPARSTRRLLKRMNEELGLPVVIFTDGDPW 250
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 380
+I + G+ ++ S L TP +++GI SD+ Y +P + ++DI +
Sbjct: 251 SFRIFASIAYGAIKTAHISEYLATPTAEFVGITASDILNYDLPTD---KLNDRDIAALES 307
Query: 381 LLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
L +D + P W EE+ LM+K K+KAE Q+L+ +G Y+++ YLP KL +
Sbjct: 308 EL-KDPRFQTPFWTEEIKLMLKIKKKAEQQSLAKYGLDYVTDTYLPEKLTE 357
>gi|159126138|gb|EDP51254.1| meiosis-specific topoisomerase Spo11, putative [Aspergillus
fumigatus A1163]
Length = 381
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 139/276 (50%), Gaps = 40/276 (14%)
Query: 150 KSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLN 209
K T ++ LS+I + + V+KRD++Y+D F Q D ++DD+A +G R++LN
Sbjct: 109 KFTAIIRGLSVIAEAIQAGLVVSKRDIYYSDPACFGSQQIVDTIIDDIAHTIGVDRAALN 168
Query: 210 VIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAA 268
V A KG+V G + + G+M+D + K + ++L++EK+A
Sbjct: 169 VEAVAKGLVAGYYRLMTKTGEMVDAR---LSTKVVK--------------WVLILEKEAV 211
Query: 269 YIRLAEDRFYNRFPC-IIVTAKGQPDVATRLFLRKMKMELK-LPV------LALVDSDPY 320
Y RL+ ++ R V KG PD++TR F+R++ E + LP ALVDSDP
Sbjct: 212 YRRLSRSSYHTRAAAGKGVLGKGYPDLSTRAFVRRLLDETRHLPAEESPRFYALVDSDPD 271
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL----DKYKIPEQCRLPMTEQDIK 376
G+ I+S Y GS ++D+ L + WLG+R SD+ D + RL + +D K
Sbjct: 272 GMAIMSTYKYGSMAHAHDNEKLNVSKLCWLGLRTSDVIGGADSFGDEAFIRLSL--RDRK 329
Query: 377 TGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQAL 412
+L NP W E+ + + +AE+Q +
Sbjct: 330 KAVAML-----SNNPVWAED---GPEQEWRAELQQM 357
>gi|412986592|emb|CCO15018.1| DNA topoisomerase VI subunit A [Bathycoccus prasinos]
Length = 457
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 142/285 (49%), Gaps = 24/285 (8%)
Query: 147 TVRKSTIT----VKILSLIHQLCLRNIHVTKRDLFYT----DVKLFQDQTQSDAVLDDVA 198
++R +TIT + +L+LIH + VT+R+++Y + LF + D+A
Sbjct: 146 SIRLNTITFARVIAMLNLIHTNVRQGKTVTQREMYYCASAKEPLLFSKVVHVLNAIKDIA 205
Query: 199 CILGCTRSSLNVIAAEKGVVVGRLIFSDN--GDMIDCTKMGMGGKAIPPNIDRVGDMQSD 256
+L R +LN+ +A KG+VVG + ++ +DC+ + G IP ++ + + D
Sbjct: 206 GLLRIDRGALNITSASKGLVVGLVSLRNDVTQTFVDCSNLDGSGFTIPGDLKTIESLSID 265
Query: 257 A---MFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMK---MELKLP 310
A FIL+VEKDA + +L ++R + R+PC +VTAKG PD+ TR FL ++ ++
Sbjct: 266 ASMCAFILVVEKDAVFNKLVQERIWERYPCAVVTAKGFPDLPTRAFLNRLASTGVQRTCK 325
Query: 311 VLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPM 370
+ LVD +P GL I S Y G + +S + +LG+ D I ++
Sbjct: 326 IYVLVDWNPSGLWIYSTYVTGGASNVNESTKYALRNAVFLGVSHED-----ILAAGKVLT 380
Query: 371 TEQDIKTGKDLLEEDFVKKNPGWV---EELNLMVKTKQKAEIQAL 412
++ K +D+ K+ P + EL M +K EI+ L
Sbjct: 381 SKHTKKESRDIANALRRKRGPLYSTFKSELEQMHALGRKCEIEGL 425
>gi|126644799|ref|XP_001388116.1| topoisomerase VIA [Cryptosporidium parvum Iowa II]
gi|126117344|gb|EAZ51444.1| putative topoisomerase VIA [Cryptosporidium parvum Iowa II]
Length = 235
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 126/246 (51%), Gaps = 17/246 (6%)
Query: 196 DVACILGCTRSSLNVIAAEKGVVVGR--LIFSDNGDMIDCTKMGMGGKAIP----PNIDR 249
D + IL R S + + KG++ GR LI+ D ++G+ G I PN D
Sbjct: 1 DFSEILQIPRISFGLFPSPKGMIGGRIKLIYKD------VEELGVSGATITDIFDPN-DS 53
Query: 250 VGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKL 309
++++ ++L++EK + + L E YNR PC+++T KG PD++TR + + + +
Sbjct: 54 KYIIKTNVKYLLVIEKASIFQYLMEREIYNRIPCLVITGKGFPDISTRKLVSDIICKSGI 113
Query: 310 PVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLP 369
L L D DP+G+ I Y GS N ++S P I +LGI D + IP R+
Sbjct: 114 TALYLGDFDPHGINIYLTYVRGSSN--FESQLAACPSIYYLGIHFEDTE--LIPSDTRVI 169
Query: 370 MTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKL 429
++E+D T K L+E+ +K + + LM + K E++A S YL YLP K+
Sbjct: 170 LSEKDRSTLKSLIEDPAIKVSTNIKYKCKLMYEHNYKCELEAFQSISSDYLVNTYLPSKI 229
Query: 430 QQKDWL 435
++ W+
Sbjct: 230 LRRTWI 235
>gi|451854047|gb|EMD67340.1| hypothetical protein COCSADRAFT_136216 [Cochliobolus sativus
ND90Pr]
Length = 455
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 166/352 (47%), Gaps = 57/352 (16%)
Query: 89 VQSTIETLILQIARSILAGN-GFSFQVPSRASSNQLYVP--ELDRIVLK--DKTTLRPFA 143
V + IE ++ +I S+L + + ++ SRA+ ++ P E D + K ++ P A
Sbjct: 94 VIARIEAMLERIIDSLLGQHESLTIRLKSRANFSRRNAPSNEGDGSIPKPKERDINFPGA 153
Query: 144 SLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGC 203
+ K T+ ++IL LIH L N +TKRD++Y LF Q+ D +DD+AC
Sbjct: 154 NAQEAWKFTVLLRILELIHGSLLDNTVMTKRDIYYRHPDLFVKQSVVDRYVDDLACTFDI 213
Query: 204 TRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLV 263
TRS LNV G IP D ++ ++L++
Sbjct: 214 TRSQLNV-----------------------------GLLIPVVRDDDSWGLTEIHWVLII 244
Query: 264 EKDAAYIRLAEDRFYNRFPC--IIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPY 320
EK+A + L ++ ++VTAKG PDVA+R FLR++ ++P+ LVD DP
Sbjct: 245 EKEATFRSLIGSAQWSTLGLHGVVVTAKGYPDVASRQFLRQLGNNAPQIPMFVLVDLDPD 304
Query: 321 GLKILSVYGCGSKNMSYD------SANLTTPDIKWLGIRPSDLD---------KYKIPEQ 365
G+ ILS Y GS + ++ + L+ P+++WLG++ ++ K K+ Q
Sbjct: 305 GIAILSTYKYGSYRLMHEDVALMNTPALSLPNVRWLGVKSDNMSLSLVGEHGTKRKMIHQ 364
Query: 366 CR--LPMTEQDIKTGKDLLEEDFVKKNP---GWVEELNLMVKTKQKAEIQAL 412
+ + +T +D +LE D ++ W EL M+ KAE+Q L
Sbjct: 365 LQGLMRLTMRDRTKATRMLEWDLCGEDGLERDWRRELQWMLMLNVKAEMQVL 416
>gi|254166844|ref|ZP_04873698.1| Type IIB DNA topoisomerase family [Aciduliprofundum boonei T469]
gi|289596418|ref|YP_003483114.1| DNA topoisomerase (ATP-hydrolyzing) [Aciduliprofundum boonei T469]
gi|197624454|gb|EDY37015.1| Type IIB DNA topoisomerase family [Aciduliprofundum boonei T469]
gi|289534205|gb|ADD08552.1| DNA topoisomerase (ATP-hydrolyzing) [Aciduliprofundum boonei T469]
Length = 362
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 148/291 (50%), Gaps = 17/291 (5%)
Query: 154 TVKILSLIHQLCLRNIHVTKRDLFYTD----VKLFQDQTQSDAVLDDVACILGCTRSSLN 209
T+ ++ I ++ T R+++Y + F Q +S+ + +D+ I G R
Sbjct: 71 TLYVMEFIKEMIRDKKSSTLREMYYISEGWGLAKFHTQDESNKLAEDLEVITGYLREDFK 130
Query: 210 VIAAEKGV-VVGRLIFSDNGD-----MIDCTK-MGMGGKAIPPNIDR--VGDMQSDAMFI 260
+ E G V+G + + I+C +G G IP N+++ + + DA F+
Sbjct: 131 LRPEEDGASVIGNITVEEINRKGKPMRINCRDDVGDSGYLIPYNVEKEKLKFVDVDADFV 190
Query: 261 LLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
+ +E + RL E+ F + I+V KGQP +TR L++M EL LPV+ D DP+
Sbjct: 191 IGIETGGMFDRLVENGFDEKARAILVHIKGQPARSTRRLLKRMNEELGLPVVIFTDGDPW 250
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 380
+I + G+ ++ S L TP +++GI SD+ Y +P + ++DI +
Sbjct: 251 SFRIFASIAYGAIKTAHISEYLATPTAEFVGITASDILNYDLPTD---KLNDRDIAALQS 307
Query: 381 LLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
L +D + P W EE+ LM+K K+KAE Q+L+ +G Y+++ YLP KL +
Sbjct: 308 EL-KDPRFQTPFWTEEIKLMLKIKKKAEQQSLAKYGLDYVTDTYLPEKLTE 357
>gi|254167482|ref|ZP_04874334.1| Type IIB DNA topoisomerase family [Aciduliprofundum boonei T469]
gi|197623745|gb|EDY36308.1| Type IIB DNA topoisomerase family [Aciduliprofundum boonei T469]
Length = 362
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 147/291 (50%), Gaps = 17/291 (5%)
Query: 154 TVKILSLIHQLCLRNIHVTKRDLFYTD----VKLFQDQTQSDAVLDDVACILGCTRSSLN 209
T+ ++ I ++ T R+++Y + F Q +S+ + +D+ I G R
Sbjct: 71 TLYVMEFIKEMIRDKKSSTLREMYYISEGWGLAKFHTQDESNKLAEDLEVITGYLREDFK 130
Query: 210 VIAAEKGV-VVGRLIFSDNGD-----MIDCTK-MGMGGKAIPPNIDR--VGDMQSDAMFI 260
+ E G V+G + + I+C +G G IP N+++ + + DA F+
Sbjct: 131 LRPEEDGASVIGNITVEEINRKGKPMRINCRDDVGDSGYLIPYNVEKEKLKFVDVDADFV 190
Query: 261 LLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPY 320
+ +E + RL E+ F + I+V KGQP +TR L++M EL LPV+ D DP+
Sbjct: 191 IGIETGGMFDRLVENGFDEKARAILVHIKGQPARSTRRLLKRMNEELGLPVVIFTDGDPW 250
Query: 321 GLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKD 380
+I + G+ ++ S L TP +++GI SD+ Y +P + ++DI +
Sbjct: 251 SFRIFASIAYGAIKTAHISEYLATPTAEFVGITASDILNYDLPTD---KLNDRDIAALQS 307
Query: 381 LLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
L D + P W EE+ LM+K K+KAE Q+L+ +G Y+++ YLP KL +
Sbjct: 308 EL-RDPRFQTPFWTEEIKLMLKIKKKAEQQSLAKYGLDYVTDTYLPEKLTE 357
>gi|326435144|gb|EGD80714.1| hypothetical protein PTSG_01304 [Salpingoeca sp. ATCC 50818]
Length = 435
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 145/299 (48%), Gaps = 47/299 (15%)
Query: 174 RDLFYTDVKLF-QDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRL-IFSDNGDMI 231
RD++Y+++ LF Q Q +D + V+C+LG R SL + + +G+ G + +F
Sbjct: 132 RDVYYSNIDLFGQTQHSADRAIFLVSCMLGVPRRSLLLSTSSRGLYHGPVEVFLPQHREA 191
Query: 232 DCTKMGM---------------------------------------GGKAIPPNIDRVGD 252
T M G + IP D +
Sbjct: 192 PVTLHDMTNNHINNNDEQQQQQQQQQAHQSQQEQEEQQQQQQQHHGGTRPIPAITDDL-R 250
Query: 253 MQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVL 312
+ A L+VEKDA +L + F C+++T KG P V TR F+R + ++ PV
Sbjct: 251 LHVTATCALVVEKDAILQQLVDCNFAETHNCLLITGKGFPGVDTRYFVRLVAEQV--PVY 308
Query: 313 ALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTE 372
+VD+D +GL+IL Y GS+++++ + L P I+WLG+ PSDL ++ + + M++
Sbjct: 309 VVVDADAHGLEILCTYAYGSQSLAFQNHELAVPHIRWLGVFPSDLTEFNVALHPQSRMSD 368
Query: 373 QDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGF-QYLSEVYLPLKLQ 430
++ + + L E + + + EEL L+ + + KAEI+ L+S ++L E YLP KL
Sbjct: 369 REYRLLEALSEREHLPQQ--MREELLLLQRMEHKAEIEILNSPERPRFLVEHYLPWKLH 425
>gi|196008211|ref|XP_002113971.1| hypothetical protein TRIADDRAFT_57943 [Trichoplax adhaerens]
gi|190582990|gb|EDV23061.1| hypothetical protein TRIADDRAFT_57943 [Trichoplax adhaerens]
Length = 161
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 81/123 (65%), Gaps = 4/123 (3%)
Query: 245 PNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKM 303
P + + ++S A F+L+VEK+A + RL + ++ CI++T KG PD++TRL +R +
Sbjct: 27 PLVADIAGIESTAKFVLIVEKEAIFQRLLDGNIKDKLNSCIVITGKGYPDMSTRLMIRFL 86
Query: 304 KMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY--- 360
LKLP L D+DPYGL+I VY GSK MS+++ NL P IKWLG+ PS+ +KY
Sbjct: 87 WDALKLPTFVLTDADPYGLEIFCVYKYGSKEMSFEAENLCFPLIKWLGVLPSEFNKYTND 146
Query: 361 KIP 363
KIP
Sbjct: 147 KIP 149
>gi|154285542|ref|XP_001543566.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150407207|gb|EDN02748.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 420
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 157/318 (49%), Gaps = 43/318 (13%)
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIA 212
+ ++IL I + + +KRD++Y D F Q+ D +DD+AC +G R++L+V A
Sbjct: 103 VLLRILGHISEAIRGDFISSKRDIYYLDPVYFGSQSVVDRCIDDIACTIGVDRTALHVAA 162
Query: 213 AEKGVVVGRLIFSDNGD-MIDCTKMG------------------MGGKAIPPNIDRVGDM 253
A KGVVVG + N D MID + G + P ++ V +
Sbjct: 163 AAKGVVVGTFNVTLNDDFMIDVAVHAEVSLLLLPDSFPFVILTCIQGMLV-PRVETVKKI 221
Query: 254 QSDAM-FILLVEKDAAYIRLAEDRFYNRFPC---IIVTAKGQPDVATRLFLRKMKME--- 306
+ + +IL++EK+A + RLA ++ I++T KG PD++TR FL +
Sbjct: 222 DTSTIRWILVIEKEATFHRLATVNYHTTSAAGSGILITGKGYPDISTRAFLHLLSRVPPS 281
Query: 307 -------LKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDK 359
+ P+ LVD DP G+ I+S Y GS+ ++D+ NL +++WLG++ S+L
Sbjct: 282 ASGALPFRQPPIFMLVDGDPDGMAIMSTYKYGSRAQAHDNTNLAVHNVQWLGLQASELVP 341
Query: 360 YKIPEQ---CRLPMTEQDIKTGKDLLEEDFV----KKNPGWVEELNLMVKTKQKAEIQAL 412
+ Q +P+T +D K +D+L V P W EL M+ T KAEI+ L
Sbjct: 342 SSLEIQGDDALIPLTSRDRKKAQDMLGRSPVFAEDGPEPAWRWELQHMLMTNVKAEIEML 401
Query: 413 SSFGFQYLSEVYLPLKLQ 430
+ + E +L KLQ
Sbjct: 402 --YEREGGIETWLDHKLQ 417
>gi|353235119|emb|CCA67136.1| related to Spo11-Coprinopsis cinerea [Piriformospora indica DSM
11827]
Length = 397
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 124/241 (51%), Gaps = 25/241 (10%)
Query: 194 LDDVACILGCTRSSLNVIAAEKGVVVGRL---------IFSDNGDMIDCTKMGMGGKAIP 244
+DD+A G RS+L V A+ KG+ G + + N D T G
Sbjct: 144 VDDLAATFGVERSALLVRASSKGIFCGSVLSIRLVNGTVIQGNDDQATLTPAGED-VEEL 202
Query: 245 PNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYN----RFPCIIVTAKGQPDVATRLFL 300
+ +G ++L+VEK+A + L + F R P II+T KG PD+A+R L
Sbjct: 203 VVEEDIG-------WVLVVEKEAIFQTLCQAEFTRINALRKPGIILTGKGYPDIASRQLL 255
Query: 301 RKMKMEL--KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLD 358
K+ L +P+ ALVD+DP+G++ILSVY GS +M + + LT + W+G+ ++L+
Sbjct: 256 HKLSSGLPETVPIFALVDADPHGIEILSVYAFGSISMRHQNDGLTAERVVWIGVMLTELE 315
Query: 359 KYKIPEQCRLPMTEQDIKTGKDLL-EEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGF 417
+ + L + ++D K + LL ED V W EL M++ QKAEI+A+ S G
Sbjct: 316 RRGVAAGDMLGLNQRDRKKLESLLRREDRVMPQL-WKNELRFMLERGQKAEIEAVYSGGL 374
Query: 418 Q 418
Q
Sbjct: 375 Q 375
>gi|339251714|ref|XP_003372879.1| carboxypeptidase B [Trichinella spiralis]
gi|316968726|gb|EFV52961.1| carboxypeptidase B [Trichinella spiralis]
Length = 827
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 120/238 (50%), Gaps = 38/238 (15%)
Query: 163 QLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVA----------------------CI 200
Q NIH + D + K +D +Q + +LD++ I
Sbjct: 453 QFSAHNIH--RVDTAHKSKKRIKDFSQRNEILDEIQRNHDGNVALFIVSDWKIKDLCNAI 510
Query: 201 LGCTRSSLNVIAAE-------KGVVVGRLIFS-DNGDMIDCTKMGMGGKAIPPNIDRVGD 252
C SS A E KG+V+G L+F N +++DC + IP D
Sbjct: 511 CNCEISSEGKAACENRALSSPKGLVLGDLVFQLGNTEIVDCNSI----STIPTRSDEFQV 566
Query: 253 MQSDAMFILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPV 311
+ + A FIL+VEKD+ + +LA ++ + I+VTAKG PD TRLFLRK+ LKLP+
Sbjct: 567 LTTSATFILIVEKDSIFEKLAMEKANSVLRSAILVTAKGYPDFPTRLFLRKLYDYLKLPM 626
Query: 312 LALVDSDPYGLKILSVYGCGSKNMSYDSA-NLTTPDIKWLGIRPSDLDKYKIPEQCRL 368
AL+D+DP G++I Y G N+SY+S N+ P +KW+G+ PS++ + + +L
Sbjct: 627 FALMDADPCGIEIFLTYKYGPMNVSYESGVNVLLPWMKWIGVYPSEISSLNLSDTQKL 684
>gi|380495490|emb|CCF32355.1| type IIB DNA topoisomerase [Colletotrichum higginsianum]
Length = 344
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 144/302 (47%), Gaps = 32/302 (10%)
Query: 141 PFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACI 200
P ++ K T ++IL + +TKR ++Y D LF+ Q+ D ++DD+A
Sbjct: 32 PGRTVHEATKFTRLMRILQMSLGALTAGRTITKRSIYYQDEHLFKQQSIVDNLVDDLAYT 91
Query: 201 LGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQ------ 254
LG R L ++A KG+V G ++ D + + P +D +
Sbjct: 92 LGLGREDLGIVATSKGLVAGPILIRTK-PQSDLDPI----RGTPSELDASSTREISQIDF 146
Query: 255 SDAMFILLVEKDAAYIRLAEDRFYNRFPC---IIVTAKGQPDVATRLFLRKMK-MELKLP 310
++L++EKDA + LA R+Y+ C I++T KG PD+ T+ FL + ++ +LP
Sbjct: 147 GPVRWVLVIEKDATFRTLAARRYYDTSTCGSGILITGKGYPDLVTKQFLHLIHDVKPELP 206
Query: 311 VLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL--------DKYKI 362
+LALVD D G+ I+ Y GS+ +++ N P + WLGI+ DL D +
Sbjct: 207 ILALVDYDYDGIAIMRCYSHGSRGHAHER-NTVVPSMAWLGIKSGDLAPRQEEGSDGSQR 265
Query: 363 PEQCRL-----PMTEQDIKTGKDL---LEEDFVKKNPGWVEELNLMVKTKQKAEIQALSS 414
P L +T +D K+ L ++ED + EL +M+ KAEIQA+
Sbjct: 266 PLGPNLFEHSSSITRKDRKSAARLISGIDEDGTDYDIDCRRELQVMLFLGAKAEIQAVDD 325
Query: 415 FG 416
G
Sbjct: 326 AG 327
>gi|315048665|ref|XP_003173707.1| meiotic recombination protein spo11 [Arthroderma gypseum CBS
118893]
gi|311341674|gb|EFR00877.1| meiotic recombination protein spo11 [Arthroderma gypseum CBS
118893]
Length = 387
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 143/280 (51%), Gaps = 22/280 (7%)
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIA 212
+ +IL LI + + +KRD+FY D F QT D +DD+A L R++L+V A
Sbjct: 91 VLTRILGLISEAIKGDFISSKRDIFYQDPVYFGSQTLVDRYIDDIAFTLDVDRAALHVAA 150
Query: 213 AEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAM-FILLVEKDAAYI 270
A KG + G I N I G I P ID V + + + +IL+VEK+A +
Sbjct: 151 AAKGAIGGNFSITMKNESSIQVGAFAEG--IIIPRIDEVDGIDTSGISWILVVEKEAVFH 208
Query: 271 RLAEDRFYNRFPC---IIVTAKGQPDVATRLFLRKMKMELK---------LPVLALVDSD 318
RL ++N I++T KG PD+++R FLR + + LP+ LVD D
Sbjct: 209 RLITSGYHNTSAAGNGILLTGKGYPDLSSREFLRLLSSQKGCNSKIVSNPLPIFILVDRD 268
Query: 319 PYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR--LPMTEQDIK 376
P G+ I+S Y GS + +ANL P I+W+G++ S++ P +PM+++D K
Sbjct: 269 PDGMAIMSTYKYGSMAQLHRNANLNVPSIRWVGLQASEMISTVHPRNTPSLVPMSQRDRK 328
Query: 377 TGKDLLEED--FVKKN--PGWVEELNLMVKTKQKAEIQAL 412
+ +L+ + F + P W +EL M+ KAE++ L
Sbjct: 329 KAEAMLKRNPSFAEDGPEPTWRKELQSMLVMNVKAELEIL 368
>gi|345560247|gb|EGX43372.1| hypothetical protein AOL_s00215g108 [Arthrobotrys oligospora ATCC
24927]
Length = 610
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 146/337 (43%), Gaps = 72/337 (21%)
Query: 155 VKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAE 214
V++L L+ + + TKRD++Y DV LF Q D ++DD+A LG R SL++ AA
Sbjct: 266 VRVLELVREAIKLDKIYTKRDIYYKDVALFGSQQTVDKLVDDIASALGVPRRSLHITAAA 325
Query: 215 KGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPP--NIDRVGDMQSDAMFILLVE------- 264
KG+V G L IF +G +I+C G G IP +I++V SD + I+ E
Sbjct: 326 KGLVCGDLSIFKTDGSIINCNIEGE-GVLIPSSTDIEKVEIRDSDTVLIIEKEVVANRNQ 384
Query: 265 ------------KDAAYIR-LAEDRFYNRFPC--IIVTAKGQPDVATR-----LFLRKMK 304
K+ A R LAE + R P I++ KG PD+ATR L+L K
Sbjct: 385 DFVSLFLLTTPTKNKAIFRTLAESGDWKRLPGRPILICGKGYPDIATRELAHYLYLTKSL 444
Query: 305 MELKLPVLALVDSDPYGLKILSVYGCGS-----KNMSYDSANLTTPDIKWLGIRPSDLDK 359
L LVD DP+GL I ++Y GS M Y+ + P ++ LG++ D+ +
Sbjct: 445 AGQYLDFYCLVDYDPHGLDIYTMYKNGSLSSRATGMFYE--QMAVPALRHLGVKFCDILE 502
Query: 360 Y----------------------------------KIPEQCRLPMTEQDIKTGKDLLEED 385
Y P Q LPMT D +L+ D
Sbjct: 503 YCSVEGSSMSQTIEESGIISTDNGEEPRSKRLRYTSSPPQGLLPMTAHDRAKAVSMLQRD 562
Query: 386 FVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSE 422
++L ++ KAEIQ L +YL E
Sbjct: 563 HNTVAAEHTDDLRKLLFVGYKAEIQVLGDQLVRYLDE 599
>gi|169624501|ref|XP_001805656.1| hypothetical protein SNOG_15510 [Phaeosphaeria nodorum SN15]
gi|160705184|gb|EAT77175.2| hypothetical protein SNOG_15510 [Phaeosphaeria nodorum SN15]
Length = 319
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 125/254 (49%), Gaps = 46/254 (18%)
Query: 185 QDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAI 243
Q+Q+ D +DD+AC G +RS LNV AA KG+V GR I +NG ID K G +
Sbjct: 55 QEQSVVDRYVDDIACTFGISRSQLNVTAAAKGLVAGRFGIIRENGHRIDGMKDREG--IL 112
Query: 244 PPNIDRVGDMQ-SDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRK 302
P I M + ++L++EK+ AKG PDVA+RLFLR+
Sbjct: 113 VPKIGENDTMDLASIHWVLVIEKE---------------------AKGYPDVASRLFLRR 151
Query: 303 MKMEL-KLPVLALVDSDPYGLKILSVYGCGSKNMSY------DSANLTTPDIKWLGIR-- 353
+ + K+P+ ALVD DP G+ I+S Y GS +++ +++ L+ P I+W+G+R
Sbjct: 152 VADQAPKIPMFALVDLDPDGMAIMSTYKYGSYRLAHEDTTRKETSGLSLPSIQWIGVRRH 211
Query: 354 -----PSD---LDKYKIPE-QCRLPMTEQDIKTGKDLLEEDFVKKN---PGWVEELNLMV 401
P D D +PE Q + +T +D +LE D + W EL M+
Sbjct: 212 HICRTPVDEGGTDASVMPELQGLMKLTARDRTKAACMLEWDLCAEGGPEEDWRHELQAML 271
Query: 402 KTKQKAEIQALSSF 415
KAE+Q L
Sbjct: 272 MLNTKAEMQILDEL 285
>gi|255598401|ref|XP_002537001.1| meiotic recombination protein spo11, putative [Ricinus communis]
gi|223517856|gb|EEF25382.1| meiotic recombination protein spo11, putative [Ricinus communis]
Length = 135
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 85/131 (64%), Gaps = 4/131 (3%)
Query: 253 MQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPV 311
M++DA +I++VEK A + RLAEDR +N+ CI++TAKG PD+ATR L K+ +L +
Sbjct: 1 MRTDARYIIVVEKHAIFQRLAEDRVFNQISCILITAKGYPDIATRFLLHKLSRSFPELLI 60
Query: 312 LALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMT 371
LALVD +P GL ILS + GS M ++ ++KWLG+R DL IPE+ +P+
Sbjct: 61 LALVDWNPAGLAILSTFKFGSIGMGLEAYRYAC-NVKWLGVRGDDLQ--LIPEESLVPLK 117
Query: 372 EQDIKTGKDLL 382
+D++ K L+
Sbjct: 118 PKDLQIAKSLM 128
>gi|212535386|ref|XP_002147849.1| meiosis-specific topoisomerase Spo11, putative [Talaromyces
marneffei ATCC 18224]
gi|210070248|gb|EEA24338.1| meiosis-specific topoisomerase Spo11, putative [Talaromyces
marneffei ATCC 18224]
Length = 397
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 150/305 (49%), Gaps = 37/305 (12%)
Query: 141 PFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACI 200
P S K T +++LSLI + N+ +TKR ++Y + LF Q +A++DD+A
Sbjct: 77 PGKSPYEAWKFTCILRVLSLIIEAVQDNLLITKRSIYYDNPGLFGTQAVVNAIVDDIAYT 136
Query: 201 LGCTRSSLNVIAAEKGVVVGRLIFSDNGDMI-DCTKMGMGGKAIPPNIDRVGDMQ-SDAM 258
+G R++L+V + +G+ VG + D I D T A+ P + +G + S+
Sbjct: 137 IGVDRTALHVASVGRGLAVGAVRIKTKSDTILDMT----AEDALIPRLKDIGSIDISEVK 192
Query: 259 FILLVEKDAAYIRLAEDRFY---NRFPCIIVTAKGQPDVATRLFLRKM------------ 303
++ +VEK+A + RL +R++ I++T KG PD+ TR F+ +
Sbjct: 193 WVCVVEKEAIFRRLVHNRYHLESTAGKGILITGKGYPDICTREFVHLISDISCKRDSSSL 252
Query: 304 -KMELKLP-----VLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL 357
+ + P ALVD D G+ I+S Y GS ++ SA+L P ++WLG R D+
Sbjct: 253 QNLHIVQPPTPPRFFALVDGDCDGMAIMSTYKYGSMAHAHASASLNAPKLQWLGTRLIDV 312
Query: 358 ----DKYKIPEQ--CRLPMTEQDIKTGKDLLEED--FVKKNP--GWVEELNLMVKTKQKA 407
+ ++ ++ + ++ +D+K + +L ++ F + P W EL M+ K
Sbjct: 313 IVKHNGLEVEDEDWVMISLSYRDVKKIRSMLLKNPVFAQDGPEIEWRAELQTMMMLNTKI 372
Query: 408 EIQAL 412
E + L
Sbjct: 373 ETEVL 377
>gi|213407322|ref|XP_002174432.1| endonuclease Rec12 [Schizosaccharomyces japonicus yFS275]
gi|212002479|gb|EEB08139.1| endonuclease Rec12 [Schizosaccharomyces japonicus yFS275]
Length = 291
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 132/261 (50%), Gaps = 16/261 (6%)
Query: 156 KILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEK 215
+++ L+HQ N + RD++Y DV LF+ Q+ DA++ ++ C+RS L+V AA K
Sbjct: 21 RLVDLLHQAINNNTVLQLRDIYYHDVGLFERQSTVDALVRELTRTFCCSRSELHVTAAGK 80
Query: 216 GVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAED 275
G+V G + D I C M I + +++ A +++VEK+A + L +
Sbjct: 81 GLVYGPVTIHTKLDTISC----MSKPWIIQYSLDIQSIRTSADTLVIVEKEATFHTLIDA 136
Query: 276 RFYNRFP---CIIVTAKGQPDVATRLFLRKMKMELKL-PVLALVDSDPYGLKILSVYGCG 331
FP + VTAKG PD++TR F+ E + L D DPYG+ I Y G
Sbjct: 137 -----FPLPNVVFVTAKGFPDLSTRQFISLFVQETGVRRAYGLFDWDPYGVSIYMCYKYG 191
Query: 332 SKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNP 391
S +++ + TT ++ +G P D ++ EQ LP+T +D + +LL + P
Sbjct: 192 S-SVTRNENMCTTKTLQPIG--PFYEDFKQLDEQFMLPITTRDFRIASNLLRTIRPLQEP 248
Query: 392 GWVEELNLMVKTKQKAEIQAL 412
V EL M+ +KAEIQ +
Sbjct: 249 IVVRELQKMLFLARKAEIQGI 269
>gi|321264504|ref|XP_003196969.1| endodeoxyribonuclease [Cryptococcus gattii WM276]
gi|317463447|gb|ADV25182.1| Endodeoxyribonuclease, putative [Cryptococcus gattii WM276]
Length = 567
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 164/329 (49%), Gaps = 25/329 (7%)
Query: 99 QIARSILAGN-GFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKI 157
+I RS+ AG G + + +R S + ++L D P S +R + I +++
Sbjct: 211 EIDRSLDAGKIGVTISLKNRKSGS------YQAVILPDSPLQCPGRQNSIMRMACI-MRV 263
Query: 158 LSLIHQLCL-RNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKG 216
S +++ L RN+ +T RD++Y + +LF+ Q D ++DD+ R V A+ KG
Sbjct: 264 ASTLYEAILDRNV-ITLRDVYYRNKQLFERQPVVDKIVDDLVATAELKRRDFYVCASAKG 322
Query: 217 VVVGR--LIFSDNGDMI--DCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRL 272
++ +I GD I T+ + A ID V + + ++L+VEKDA + L
Sbjct: 323 LIASSSLVIHYRTGDEIVLSATRANLVDPA--EKID-VIEAPNGLDWVLIVEKDAIFQSL 379
Query: 273 AEDRF--YNRF-PCIIVTAKGQPDVATRLFLRKMKMELK-LPVLALVDSDPYGLKILSVY 328
Y R +++T KG PD+ATR LR + + + ALVD+DP+GLKILS Y
Sbjct: 380 CGAGLLQYERIGHGVLITGKGFPDLATRQILRLIVDTFPCVKIYALVDADPHGLKILSTY 439
Query: 329 GCGSKNMSYDSANLTTP---DIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEED 385
GSK +Y S P ++WLG+R SD I +P+ + DI+ +L D
Sbjct: 440 MYGSKANAYSSDYEDLPLRDRVQWLGLRASDWSDLGINYDDLIPLEQSDIQLAMSML-RD 498
Query: 386 FVKKNPGWVEELNLMVKTKQKAEIQALSS 414
W EL+ M+ ++KAEI+ +++
Sbjct: 499 HQTLPDEWKRELSHMLHLRRKAEIEIITA 527
>gi|242792903|ref|XP_002482051.1| meiosis-specific topoisomerase Spo11, putative [Talaromyces
stipitatus ATCC 10500]
gi|218718639|gb|EED18059.1| meiosis-specific topoisomerase Spo11, putative [Talaromyces
stipitatus ATCC 10500]
Length = 409
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 155/319 (48%), Gaps = 43/319 (13%)
Query: 150 KSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLN 209
K T +++LSLI + N+ +TKR ++Y + LF Q + ++DD+A +G R+ L+
Sbjct: 90 KFTCILRVLSLITEAVQDNLLITKRSIYYDNPGLFGTQAVVNTIVDDIAYTIGVDRAVLH 149
Query: 210 VIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAA 268
+I+ KG+ VG + I + + M+D T IP ID S+ ++ +VEK+AA
Sbjct: 150 IISVGKGLAVGAVRIRTKSDSMLDLTA---EDALIPRLIDVSSVDISEVKWVCVVEKEAA 206
Query: 269 ------YIRLAEDRFYNRFPC---IIVTAKGQPDVATRLFL--------RKMKMELK--- 308
+ RL +R++ I++T KG PD+ TR F+ R+ L+
Sbjct: 207 DKRQAVFRRLVHNRYHLESAAGKGILITGKGYPDICTREFVHLISDITFRRHNATLQNID 266
Query: 309 -------LPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL---- 357
L ALVD D G+ I+S Y GS ++ SA L P ++WLG R D+
Sbjct: 267 IVPSPTPLRFFALVDGDCDGIAIMSTYKYGSMAHAHASAMLNAPKLQWLGTRIEDVIIKQ 326
Query: 358 --DKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPG----WVEELNLMVKTKQKAEIQA 411
+ + + + ++ +D+K + +L ++ V G W EL +M+ K E +
Sbjct: 327 NGAEVEDEDWVMISLSNRDVKKIRSMLMKNPVFGENGPQLDWRVELQIMMMLNTKVETEV 386
Query: 412 LSSFGFQYLSEVYLPLKLQ 430
L +G + E +L K++
Sbjct: 387 L--YGTEGSLEGWLDRKME 403
>gi|58270330|ref|XP_572321.1| endodeoxyribonuclease [Cryptococcus neoformans var. neoformans
JEC21]
gi|134117758|ref|XP_772513.1| hypothetical protein CNBL1280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255127|gb|EAL17866.1| hypothetical protein CNBL1280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228579|gb|AAW45014.1| endodeoxyribonuclease, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 559
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 147/282 (52%), Gaps = 23/282 (8%)
Query: 146 STVRKSTITVKILSLIHQLCL-RNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT 204
S++ + T +++ S +++ L RN+ +T RD++Y D +LF+ Q D ++DD+ G
Sbjct: 245 SSIMRMTCIMRVASTLYEAILDRNV-ITLRDVYYRDKQLFERQPVVDKIVDDLVATAGLR 303
Query: 205 RSSLNVIAAEKGVVVGR--LIFSDNGD--MIDCTKMGMGGKAIPPNIDRVGDMQSDAMFI 260
R V A+ KG++ +I GD ++ T+ + A ID V + + ++
Sbjct: 304 RRDFYVCASAKGLIASSSLVIRYRTGDEIILSATRANLVDPA--EKID-VIEAPNGLDWV 360
Query: 261 LLVEKDAAYIRLA------EDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELK-LPVLA 313
L+VEKDA + L ++R + +++T KG PD+ATR LR + + + A
Sbjct: 361 LIVEKDAIFQSLCGAGILQDERIGH---GVLITGKGFPDLATRQILRLIADTFPCVKMYA 417
Query: 314 LVDSDPYGLKILSVYGCGSKNMSY--DSANLTTPD-IKWLGIRPSDLDKYKIPEQCRLPM 370
LVD+DP+GLKILS Y GSK +Y D +L D ++WLG+R S I +P+
Sbjct: 418 LVDADPHGLKILSTYMYGSKANAYSTDYGDLPLGDRVQWLGLRASHWSDLHISYDHLIPL 477
Query: 371 TEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQAL 412
+ DI+ +L D W EL+ M+ +KAEI+ +
Sbjct: 478 EQSDIQMAMSML-RDHQTLPVEWKRELSHMLHLHRKAEIEII 518
>gi|156062826|ref|XP_001597335.1| hypothetical protein SS1G_01529 [Sclerotinia sclerotiorum 1980]
gi|154696865|gb|EDN96603.1| hypothetical protein SS1G_01529 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 300
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 137/286 (47%), Gaps = 43/286 (15%)
Query: 141 PFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACI 200
P L + T ++I++L H+ + +TKRD++Y D +LF Q D +DD+A
Sbjct: 3 PREKLGNLVGWTALLRIVTLSHEALVTGNIITKRDMYYRDPELFTKQAIVDRFVDDIAYT 62
Query: 201 LGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQ-SDAMF 259
LG R ++NV + P + + ++ S +
Sbjct: 63 LGLKRDAMNV------------------------------SQLVPWVREIEEIDLSQVKW 92
Query: 260 ILLVEKDAAYIRL--AEDRFYNRFPCIIV----TAKGQPDVATRLFLRKMKMELKL-PVL 312
IL++EK+ + L A R P TAKG PD+ +R FL + L P+
Sbjct: 93 ILVIEKEVVHFNLQVATSLTQYRLPFAHWKKSDTAKGYPDIQSRQFLHYLAENHPLIPIY 152
Query: 313 ALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTE 372
ALVD DP G+ I+S Y GS +++++ +L+ P I+WLG++ +D+ ++ L +T+
Sbjct: 153 ALVDFDPDGIGIMSTYKYGSVALAHENEDLSVPSIRWLGLKSTDMMHGVKEDEGLLKLTK 212
Query: 373 QDIKTGKDLLEEDFVKKNPG----WVEELNLMVKTKQKAEIQALSS 414
+D + +L+ D V ++ G W +L +M+ KAEIQ + +
Sbjct: 213 RDRRIAVGMLQRD-VCQDGGVEKEWRRQLQIMLMLNTKAEIQVIGN 257
>gi|302909918|ref|XP_003050179.1| hypothetical protein NECHADRAFT_85034 [Nectria haematococca mpVI
77-13-4]
gi|256731116|gb|EEU44466.1| hypothetical protein NECHADRAFT_85034 [Nectria haematococca mpVI
77-13-4]
Length = 398
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 130/279 (46%), Gaps = 42/279 (15%)
Query: 85 SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
++ V + IE ++ QI S+ A S R + P+ R +++ FA
Sbjct: 47 TVGTVVARIENILSQIIDSVSACQELSITFTPRRPARSRGQPDEVRFPGRNQQEAVKFAR 106
Query: 145 LSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT 204
+ + IL L H + +TKR +FY LF+ Q Q D ++DD+A LG
Sbjct: 107 I---------LLILQLSHDALVSGTILTKRHIFYQHQDLFKRQAQVDELVDDIAFTLGIG 157
Query: 205 RSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKM----GMGGKAIPPNIDRVGDMQ-SDAMF 259
R+ LN++AA KGV+ G L D+ D T + G G AIP I V + +
Sbjct: 158 RADLNIVAASKGVLAGPLTI----DLTDGTSLDPCSGDLGVAIPA-IQSVSAVHLHHVKW 212
Query: 260 ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSD 318
L+VEKD AKG PD+ TR FL + +L +L LVD D
Sbjct: 213 FLVVEKD---------------------AKGYPDLTTRAFLNYISTRHPQLSILGLVDYD 251
Query: 319 PYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL 357
P G++IL Y GS +S++ A+L T I+WLGI+ L
Sbjct: 252 PDGVRILRCYRHGSDRLSHE-ADLDTQAIQWLGIKSDQL 289
>gi|255949132|ref|XP_002565333.1| Pc22g14090 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592350|emb|CAP98697.1| Pc22g14090 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 368
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 134/288 (46%), Gaps = 42/288 (14%)
Query: 150 KSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLN 209
K T+ ++IL+++ Q+ ++KRD++Y D + F+ Q D ++DD+A +G R++LN
Sbjct: 89 KFTVILRILAILDQVIRTGQLISKRDIYYIDPEFFRMQYIVDGIVDDLAYTIGVNRTALN 148
Query: 210 VIAAEKGVVVG--RLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDA 267
V AA KG+V G RLI + +ID A+F L
Sbjct: 149 VEAAAKGLVTGDFRLIRGSH-ILIDAHPC------------------PQAVFHRLARISY 189
Query: 268 AYIRLAEDRFYNRFPCI---IVTAKGQPDVATRLFLRKM-----KMELKLP-VLALVDSD 318
LA + C+ KG PD TR FLR M K + P AL D D
Sbjct: 190 HTRALAGEGIMVTVSCVSDLAYAGKGYPDFMTRTFLRAMSDSASKQSRRPPRFYALTDGD 249
Query: 319 PYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPE----QCRLPMTEQD 374
P+G+ I+S Y GS + +A L+ P ++WLG+R SD+ +PE L +T +D
Sbjct: 250 PHGMAIMSTYKYGSAANLHQNARLSIPRLQWLGLRVSDI--IAVPEVLGDTALLSLTMRD 307
Query: 375 IKTGKDLLEEDFVKKN----PGWVEELNLMVKTKQKAEIQALSSFGFQ 418
K +L V + P W EL M+ KAEI+ L +G Q
Sbjct: 308 RKKIMAMLRNSPVWASDGPEPEWRAELQRMLVLNLKAEIEIL--YGCQ 353
>gi|134078477|emb|CAL00340.1| unnamed protein product [Aspergillus niger]
Length = 388
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 145/313 (46%), Gaps = 61/313 (19%)
Query: 133 LKDKTTLR-PFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSD 191
++ TT R P ++ K T +++L+ I + + V+KRD++Y+D F Q D
Sbjct: 78 IQTYTTYRWPGGDMNEALKFTAALRVLAAIAEAVQAGLVVSKRDIYYSDPICFGSQKTVD 137
Query: 192 AVLDDVACILGCTRSSLNVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRV 250
++DD+A +G R++L V AA KG+VVG + + + ++D
Sbjct: 138 TLVDDLAHTMGVDRAALYVGAAAKGLVVGYYQMTTTSAGVVDAR---------------- 181
Query: 251 GDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPC---IIVT-----------------AKG 290
+ A Y RLA ++ R ++VT KG
Sbjct: 182 ------------LSNQAVYRRLASSNYHIRSAAGKGVLVTVSADTPITFXETYQPFQGKG 229
Query: 291 QPDVATRLFLRKM-----KMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTP 345
PD++TR F+RK+ ++ K ALVD DP G+ I++ Y GS ++++ NL P
Sbjct: 230 YPDLSTRAFVRKLFDHSHQLTKKPQFYALVDGDPDGMAIMATYKYGSVAFAHENRNLNVP 289
Query: 346 DIKWLGIRPSDLDKYKIP--EQCRLPMTEQDIKTGKDLLEEDFVKK----NPGWVEELNL 399
+ WLG+R +++ P + L +T++D K D+L ++ V + P W EL
Sbjct: 290 GLHWLGLRLAEVVAGADPLGDGTLLHLTKRDRKKAIDMLSKNPVWEADGPEPEWRVELQR 349
Query: 400 MVKTKQKAEIQAL 412
M+ KAE++ L
Sbjct: 350 MLMLNVKAEMEIL 362
>gi|390601971|gb|EIN11364.1| DNA topoisomerase IV alpha subunit, partial [Punctularia
strigosozonata HHB-11173 SS5]
Length = 199
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 113/209 (54%), Gaps = 18/209 (8%)
Query: 155 VKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAE 214
+ +LS IH+ + ++ VTKRD++Y D+ LF+ Q+ D ++DD+ +R+ LNV A+
Sbjct: 5 MSVLSSIHEAVVTDMPVTKRDIYYQDINLFRTQSTVDRLVDDIGATFEVSRAQLNVRASP 64
Query: 215 KGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPN--IDRVGDMQSDAMFILLVEKDAAYIRL 272
KG+ +G + + T +P N I R + SD ++L++EK+A+
Sbjct: 65 KGLFLGSGLTMHLVSGLPITGNDSEATIVPQNEDISRCV-VDSDVRWVLILEKEASS--- 120
Query: 273 AEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL--KLPVLALVDSDPYGLKILSVYGC 330
C + KG PDVATR + ++ +L +P+LALVD DP+G+ IL Y
Sbjct: 121 ---------RCTL-GGKGYPDVATRKLVNQLANDLPTNVPILALVDWDPHGIDILLTYKL 170
Query: 331 GSKNMSYDSANLTTPDIKWLGIRPSDLDK 359
GS +M ++ L ++WLGI SD+ K
Sbjct: 171 GSISMLHEKDTLAASRVQWLGIYSSDVLK 199
>gi|291333526|gb|ADD93223.1| DNA topoisomerase VI subunit A [uncultured archaeon
MedDCM-OCT-S08-C37]
Length = 207
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 111/199 (55%), Gaps = 8/199 (4%)
Query: 236 MGMGGKAIPPNID--RVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPD 293
+G G +P N++ ++ +++D FI+ +E + RL E+ F + C ++ KGQP
Sbjct: 10 VGDSGYGVPYNVETEKIELLENDIDFIMAIETGGMFDRLIENGFDEDYRCGLLHLKGQPA 69
Query: 294 VATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIR 353
+TR +++M E LPV+ +D DP+ +I + G+ ++ S L TP +LGI
Sbjct: 70 RSTRRIIKRMSEEWDLPVVVFLDGDPWSFRIFASIAYGAIKTAHISEYLATPSATYLGIT 129
Query: 354 PSDLDKYKIPEQCRLPMTEQDIKT-GKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQAL 412
D+ Y +P ++++DI+ +L + F + W +++N+M++ +KAE Q+L
Sbjct: 130 ADDIVAYDLPSD---DLSKKDIEALNAELSDPRFA--DSWWQDQINMMLELDKKAEQQSL 184
Query: 413 SSFGFQYLSEVYLPLKLQQ 431
+ +G +++E YLP KL +
Sbjct: 185 AKYGLDFVTETYLPEKLAE 203
>gi|406866418|gb|EKD19458.1| meiosis-specific topoisomerase Spo11 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 430
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 140/299 (46%), Gaps = 51/299 (17%)
Query: 150 KSTITVKILSLIHQLCLRNIHVTKR-------------------------DLFYTDVKLF 184
K T ++IL L H+ + I TKR D++Y + +LF
Sbjct: 137 KFTALLRILELSHEALVTGIVTTKRLNAYMSLDCSIDAYYYPLPFQIPKIDIYYREPELF 196
Query: 185 QDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIP 244
Q D +DD+A G R +LNV+ S + + G+ +
Sbjct: 197 MKQAVVDRYVDDIAYTFGVNRDALNVM-------------SQSLTSPPSQRQGL----LI 239
Query: 245 PNIDRVGDMQS-DAMFILLVEKDAAYIRLAEDRFYNRFPC---IIVTAKGQPDVATRLFL 300
PN + +Q D +IL++EK+A + LA +++ I++TAKG PD+ TR FL
Sbjct: 240 PNPSEISTIQFLDVRWILVIEKEATFRTLASAQYWQSSLAGRGILLTAKGYPDIQTRQFL 299
Query: 301 RKMKM-ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDK 359
+ + +LALVD DP G+ I++ Y GS++++++ +L P ++WLG+R D+
Sbjct: 300 HLLSTCHPSIAILALVDFDPDGIGIMATYKHGSQSLAHEQ-DLAVPSVRWLGVRSGDIGA 358
Query: 360 YKIPEQ--CRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFG 416
+ E L ++ +D + +LE + + W+ EL +M+ KAEIQ L G
Sbjct: 359 VGVGEGEPGLLRLSARDRRVAVRMLERGG-QVDAEWMRELRVMLVLNVKAEIQILGGGG 416
>gi|327300939|ref|XP_003235162.1| hypothetical protein TERG_04214 [Trichophyton rubrum CBS 118892]
gi|326462514|gb|EGD87967.1| hypothetical protein TERG_04214 [Trichophyton rubrum CBS 118892]
Length = 387
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 144/282 (51%), Gaps = 26/282 (9%)
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIA 212
+ +IL LI + +KRD+FY D F Q D +DD+A L +R++L+V A
Sbjct: 91 VLTRILGLISEAIKGGFISSKRDIFYQDPVYFGSQRLVDRYIDDIAFTLDVSRAALHVAA 150
Query: 213 AEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQ-SDAMFILLVEKDAAYI 270
A KG + G I +G I G + P I V ++ S +IL++EK+A +
Sbjct: 151 AAKGAIGGNFSITMKSGSSIQVGACTEG--IVIPRIHEVKEIDISGISWILVIEKEAVFH 208
Query: 271 RLAEDRFYNRFPC---IIVTAKGQPDVATRLFLRKM--------KMELK-LPVLALVDSD 318
RL ++N I++T KG PD+++R FLR + KM LP+ LVDSD
Sbjct: 209 RLITSGYHNASAAGSGILLTGKGYPDLSSREFLRLLSRHEVCNSKMIFNPLPIFILVDSD 268
Query: 319 PYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL----DKYKIPEQCRLPMTEQD 374
P G+ I+S Y GS + +A+L P I+W+G++ S++ +P +PM++ D
Sbjct: 269 PDGMAIMSTYKYGSMAQVHRNADLNVPSIQWVGLQASEMMSAASHTNMP--SLVPMSQHD 326
Query: 375 IKTGKDLLEED--FVKKN--PGWVEELNLMVKTKQKAEIQAL 412
K + +L+ + F + P W +EL M+ KAE++ L
Sbjct: 327 RKKAEAMLKRNPSFAEDGPEPAWRKELQSMLVMNLKAELEIL 368
>gi|167385195|ref|XP_001737243.1| meiotic recombination protein SPO11 [Entamoeba dispar SAW760]
gi|165900029|gb|EDR26491.1| meiotic recombination protein SPO11, putative [Entamoeba dispar
SAW760]
Length = 340
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 152/331 (45%), Gaps = 44/331 (13%)
Query: 118 ASSNQLY--VPELDRIVLKDKTTLRPFASLSTVRKSTI-----TVK---------ILSLI 161
A+SN + + E+ ++V+K F L T R + TVK ILS I
Sbjct: 2 ANSNDVICIIEEITQVVVKSLVQKHKFPLLQTKRNCNVRCPRFTVKKKKYFKLLVILSTI 61
Query: 162 HQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT-RSSLNVIAAEKGVVVG 220
++L L N T R+L+YT +F+DQT+ + ++ D+ + G + L++ +G++ G
Sbjct: 62 YELILTNKQFTVRELYYTHKTIFKDQTELENLIRDIKLLFGVNDLNILHLTHTPRGILFG 121
Query: 221 RLIFSDNGDMIDCTK------MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAE 274
+ ++D TK + + I PN F+L+VEK+A + RL +
Sbjct: 122 EVTLVTPIYVMDFTKKLQLPILSSPFQFIIPN---------RRCFLLIVEKEAFFERLVQ 172
Query: 275 DRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKN 334
++FPCII+ ++G PD AT + +L + LVD D YG++I + CGS
Sbjct: 173 SHLSDQFPCIILCSRGFPDNATFTIAHHLTQKLNIIPCCLVDGDVYGIEIFLTFLCGSWK 232
Query: 335 MSYDSANLTTPD-----IKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKK 389
+ S D ++W +RPSD P+T+++ +LE + VK
Sbjct: 233 KNGISRISKQNDEGISLLRWSLLRPSDTKGIS-------PLTDREKVIANHMLESEVVKC 285
Query: 390 NPGWVEELNLMVKTKQKAEIQALSSFGFQYL 420
N E+ ++K K E+ L++ +
Sbjct: 286 NQEIELEIKTLLKNNTKMELDELANTNVSFF 316
>gi|407043152|gb|EKE41773.1| topoisomerase, putative [Entamoeba nuttalli P19]
Length = 340
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 143/316 (45%), Gaps = 42/316 (13%)
Query: 125 VPELDRIVLKDKTTLRPFASLSTVRKSTI-----TVK---------ILSLIHQLCLRNIH 170
+ E+ ++V+K F L T R + TVK ILS IH+L L N
Sbjct: 11 IEEITQVVVKGLVQRHQFPLLQTQRNCNVRCPRFTVKKKKYFKFLVILSTIHELILANKQ 70
Query: 171 VTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT-RSSLNVIAAEKGVVVGRLIFSDNGD 229
T R+L+YT +F+DQT+ + ++ D+ + G + L++ +G++ G +
Sbjct: 71 FTVRELYYTHKAIFKDQTELENLIGDIKLLFGVNDLNVLHLTHTPRGILYGEVTLVTPLY 130
Query: 230 MIDCTK------MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPC 283
++D TK + + I P S F+L+VEK+A + RL + ++FPC
Sbjct: 131 VMDFTKKLQLPILSSPFQFITP---------SQRCFLLIVEKEAFFERLIQSHLIDQFPC 181
Query: 284 IIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLT 343
II+ ++G PD +T + + + LVD D YG++I + CG + S
Sbjct: 182 IILCSRGFPDNSTFTIAHHLTQKSNIIPCCLVDGDVYGIEIFLTFLCGGWKKNRLSGTSK 241
Query: 344 TPD-----IKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELN 398
D ++W +RPSD P+T ++ +LE + VK N E+
Sbjct: 242 QSDDGISLLRWSLLRPSDYKGVS-------PLTSREKIIASHMLESEVVKYNQEIELEIK 294
Query: 399 LMVKTKQKAEIQALSS 414
++K K E+ L++
Sbjct: 295 TLLKNNTKMELDELAN 310
>gi|350293955|gb|EGZ75040.1| DNA topoisomerase IV, alpha subunit [Neurospora tetrasperma FGSC
2509]
Length = 439
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 141/286 (49%), Gaps = 44/286 (15%)
Query: 82 TDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSN-QLYVPELDRIVLKDKTTLR 140
+D +LS +++ ET++ I+ G +P R S+N Q++ P +D +
Sbjct: 56 SDDALSKIEALFETIVDAIS------VGSPITIPYRRSTNAQVFDPTASASNPRDGRHMD 109
Query: 141 ----PFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDD 196
P + +R+ +I+ + H+ L VTKR+++Y +++LF+ Q+ D ++D+
Sbjct: 110 SVRFPGRNPQELRRFEALFRIIEISHEALLSGTLVTKRNIYYQNMELFRSQSVVDEMVDN 169
Query: 197 VACILGCTRSSLNVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 255
+A LG R+ LN++A KG+V G++ + G I+C + S
Sbjct: 170 LAFTLGVGRNDLNIVATAKGLVAGQVELIMRGGSKINCAE------------------SS 211
Query: 256 DAMFILLVEKDAAYIRLAEDRFYN---RFPCIIVTAKGQPDVATRLFLRKMK-MELKLPV 311
D+ A + L+ R+Y I+VT KG PD+ATR FL + + +L +
Sbjct: 212 DS---------ATFRTLSASRYYTVSRAGSGILVTGKGYPDLATRKFLATIHSVRPRLLM 262
Query: 312 LALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL 357
ALVD DP+G+ +L Y S+ + ++ ++WLGIR SD+
Sbjct: 263 FALVDFDPHGISVLRTYQYSSQRLDHEERTKVF-GLRWLGIRSSDV 307
>gi|383130742|gb|AFG46125.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
Length = 52
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/52 (92%), Positives = 52/52 (100%)
Query: 384 EDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
EDFVKK+PGWV+ELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ+DW+
Sbjct: 1 EDFVKKSPGWVDELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQRDWI 52
>gi|313234274|emb|CBY10341.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 111/232 (47%), Gaps = 16/232 (6%)
Query: 151 STITVKILSL------IHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT 204
S I+ + L+L +H+L N TKR L+Y LFQDQ D D++A IL
Sbjct: 2 SVISDRFLALYTVGITVHRLIRENASSTKRGLYYMHAGLFQDQKIVDKAADELAYILSVF 61
Query: 205 RSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSD-AMFILLV 263
R L + A KG G L + C G IP ++ + F+L++
Sbjct: 62 RPDLRLHQAAKGEAQGHL------HLPGCNFACEQGGQIPADLSEINFSGVQLPQFVLVL 115
Query: 264 EKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLK 323
EK A Y RL E+ F C++VT +G PD ATR L ++ +P LVD DP GL
Sbjct: 116 EKFAIYQRLVEEGFCASRNCLLVTGRGMPDRATRALLARLDQS-GVPCYILVDGDPCGLD 174
Query: 324 ILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLD-KYKIPEQCRLPMTEQD 374
I Y GS + ++ ++ + GIRP+ + ++K P+ +L +T+ D
Sbjct: 175 IFLTYRLGSWQLVHEQ-DIVVRGLILAGIRPNQIKTRFKFPKDAQLALTKTD 225
>gi|402217236|gb|EJT97317.1| DNA topoisomerase IV alpha subunit, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 248
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 135/255 (52%), Gaps = 24/255 (9%)
Query: 172 TKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLI--FSDNGD 229
T RD+FY D LF +Q SD ++D ++ +LG R +LN+ A+ +G+ G I +G+
Sbjct: 7 TLRDVFYRDPSLFDNQGVSDKLIDLLSELLGEKRGALNIRASPRGMFAGSAITLLLKSGE 66
Query: 230 MIDCTKMGMGGKAIP--PNIDRVGDMQSDAMFILLVEKDA-AYIRLAED--RFYNRFPCI 284
I T G+ IP +I+R+ D++ D F+++VEK+ Y R+ + ++R
Sbjct: 67 EI--TASATRGQTIPVEEDIERI-DVRDDISFVVVVEKEVRTYTRVHGKSLKIFSRPLLN 123
Query: 285 IVTAKGQPDVATRLFLRKMKMELK--LPVLALVDSDPYGLKILSVYGCGSKNMSYDSANL 342
+ KG PD+ATR +++ +L +P+ LVD+DPYGL IL+ + + +
Sbjct: 124 GLQGKGYPDLATRDLFKRLAQDLPPWVPITVLVDADPYGLDILNQFVKACDGQAGER--- 180
Query: 343 TTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE--DFVKKNPGWVEELNLM 400
++W+G+ ++ + I Q LP+ D + +L E D + W EEL M
Sbjct: 181 ----VQWIGVFGTEWTELGIEPQQLLPLKPTDCRKAFKMLRETPDLPSR---WREELQHM 233
Query: 401 VKTKQKAEIQALSSF 415
+ ++KAEI+ LSS
Sbjct: 234 LFLQRKAEIECLSSL 248
>gi|226529322|ref|NP_001145818.1| uncharacterized protein LOC100279325 [Zea mays]
gi|219884541|gb|ACL52645.1| unknown [Zea mays]
Length = 270
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 86/146 (58%)
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ +++L ++ QL +N H +KRD++Y +F + D ++D+ + C+R +LNV+
Sbjct: 99 NVLLRVLFVVQQLLQQNKHCSKRDIYYMYPSIFVEVAVVDRAINDICILFKCSRHNLNVV 158
Query: 212 AAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIR 271
KG+V+G + F + + C +IP +I+ + D+ S A +IL+VEK+ + R
Sbjct: 159 PVVKGLVMGWIRFMEGEKKVYCITSVNAAFSIPVDIEAIKDVVSVAHYILVVEKETVFQR 218
Query: 272 LAEDRFYNRFPCIIVTAKGQPDVATR 297
LA D+F R CI++T +G PD+ TR
Sbjct: 219 LANDKFCERNRCIVITGRGYPDIPTR 244
>gi|67476294|ref|XP_653750.1| topoisomerase [Entamoeba histolytica HM-1:IMSS]
gi|56470731|gb|EAL48364.1| topoisomerase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449705811|gb|EMD45783.1| topoisomerase, putative [Entamoeba histolytica KU27]
Length = 340
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 143/316 (45%), Gaps = 42/316 (13%)
Query: 125 VPELDRIVLKDKTTLRPFASLST-----VRKSTITVK---------ILSLIHQLCLRNIH 170
+ E+ + V+K F L T VR +TVK ILS IH+L L N
Sbjct: 11 IEEIIQFVVKGLAQRHQFPLLQTQRNCNVRCPRLTVKKKKYFKFLVILSTIHELILSNKQ 70
Query: 171 VTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT-RSSLNVIAAEKGVVVGRLIFSDNGD 229
T R+L+YT +F+DQT+ + ++ DV + G + L++ +G++ G +
Sbjct: 71 FTVRELYYTHKTIFKDQTELENLIGDVKLLFGVNDLNVLHLTHTPRGILYGEVTLVTPIY 130
Query: 230 MIDCTK------MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPC 283
++D TK + + I P S F+L+VEK+A + RL + ++FPC
Sbjct: 131 VMDFTKKLQLPILSSPFQFIIP---------SQRCFLLIVEKEAFFERLIQSHLIDQFPC 181
Query: 284 IIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLT 343
II+ ++G PD +T + + + LVD D YG++I + CG + S
Sbjct: 182 IILCSRGFPDNSTFTIAHHLTQKPNIIPCCLVDGDVYGIEIFLTFLCGGWKKNRLSGTSK 241
Query: 344 TPD-----IKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELN 398
D ++W +RPSD P+T ++ +LE + VK N E+
Sbjct: 242 PSDDGISLLRWSLLRPSDYKGVS-------PLTNREKIIASHMLESEVVKYNQEIELEIK 294
Query: 399 LMVKTKQKAEIQALSS 414
++K K E+ L++
Sbjct: 295 TLLKNNTKMELDELAN 310
>gi|413933055|gb|AFW67606.1| hypothetical protein ZEAMMB73_214766 [Zea mays]
Length = 365
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 86/146 (58%)
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ +++L ++ QL +N H +KRD++Y +F + D ++D+ + C+R +LNV+
Sbjct: 83 NVLLRVLFVVQQLLQQNKHCSKRDIYYMYPSIFVEVAVVDRAINDICILFKCSRHNLNVV 142
Query: 212 AAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIR 271
KG+V+G + F + + C +IP +I+ + D+ S A +IL+VEK+ + R
Sbjct: 143 PVVKGLVMGWIRFMEGEKKVYCITSVNAAFSIPVDIEAIKDVVSVAHYILVVEKETVFQR 202
Query: 272 LAEDRFYNRFPCIIVTAKGQPDVATR 297
LA D+F R CI++T +G PD+ TR
Sbjct: 203 LANDKFCERNRCIVITGRGYPDIPTR 228
>gi|299752227|ref|XP_001830783.2| Spo11 [Coprinopsis cinerea okayama7#130]
gi|298409736|gb|EAU91152.2| Spo11 [Coprinopsis cinerea okayama7#130]
Length = 353
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 124/262 (47%), Gaps = 48/262 (18%)
Query: 156 KILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEK 215
++L ++H+ + TKRD++Y DV LF Q+ D ++DD+A G R LNV
Sbjct: 104 RVLDIMHEGLVTGTPTTKRDIYYKDVALFGRQSVVDTLVDDLAATWGTQRCDLNV----- 158
Query: 216 GVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAED 275
P NI D++S V++D A++ + E
Sbjct: 159 ----------------------------PSNIPAGEDIES-----FGVDEDIAWVLVVEK 185
Query: 276 RFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL--KLPVLALVDSDPYGLKILSVYGCGSK 333
KG PD+ATR ++ + L + + ALVD DPYG+ ILSVY GS+
Sbjct: 186 EL------TATKGKGYPDIATRHLVKSLGDALPKHVALAALVDCDPYGIDILSVYRYGSQ 239
Query: 334 NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW 393
+M +++ L T IKWLG+R S++ ++ + LP+T+ D + +L+ + + W
Sbjct: 240 SMRHENDTLATRRIKWLGLRISEVMEWDLDPSLLLPLTDYDENKIRSMLKRPHLPRR--W 297
Query: 394 VEELNLMVKTKQKAEIQALSSF 415
+EL +KAEI+ L S
Sbjct: 298 RDELEATQARGRKAEIEVLCSL 319
>gi|361068649|gb|AEW08636.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130714|gb|AFG46111.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130716|gb|AFG46112.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130718|gb|AFG46113.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130720|gb|AFG46114.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130722|gb|AFG46115.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130724|gb|AFG46116.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130726|gb|AFG46117.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130728|gb|AFG46118.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130730|gb|AFG46119.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130732|gb|AFG46120.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130734|gb|AFG46121.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130736|gb|AFG46122.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130738|gb|AFG46123.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130740|gb|AFG46124.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130744|gb|AFG46126.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130746|gb|AFG46127.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130748|gb|AFG46128.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
Length = 52
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/52 (90%), Positives = 51/52 (98%)
Query: 384 EDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
EDFVKK+PGWV+ELNLMVKTK KAEIQALSSFGFQYLSEVYLPLKLQQ+DW+
Sbjct: 1 EDFVKKSPGWVDELNLMVKTKHKAEIQALSSFGFQYLSEVYLPLKLQQRDWI 52
>gi|145967210|gb|ABP98997.1| meiotic transesterase, partial [Trypanosoma cruzi]
Length = 314
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 117/252 (46%), Gaps = 38/252 (15%)
Query: 145 LSTVRKSTITVKILSLIHQLC------LRNIHV----TKRDLFYTDVKLFQDQTQSDAVL 194
++T R+STI L +I +NIH T+RD++Y +L DQ + V+
Sbjct: 39 VTTTRRSTIRESRLRVIRLQLLVLRLLYQNIHCGIISTQRDVYYRLARLVPDQGCINRVI 98
Query: 195 DDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPP--------- 245
+ I+G R L V+ +G V G + F +D G G +P
Sbjct: 99 QQLVQIIGIPRQWLGVVPGTRGCVGGSISFHG----VDLRCYGSEGLPLPTTQEELRVVQ 154
Query: 246 -NIDRVG------------DMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQP 292
++DR ++ +I++VEK A + RL E+R + R PC+++T+ G P
Sbjct: 155 GDVDRTAASNKDNVPFIGFEIHGKTRYIVVVEKHAVFFRLMEERIFERLPCVLLTSHGFP 214
Query: 293 DVATRLFLRKMKMELK-LPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLG 351
VA R L + + +P++ALVD +P GL IL Y G+ M +S + + WLG
Sbjct: 215 TVAARTLLSNLHRAAQSVPLVALVDYNPSGLSILQQYKYGAGGMR-ESQYVAVHALHWLG 273
Query: 352 IRPSDLDKYKIP 363
+R + + + P
Sbjct: 274 LRTHHIAEGREP 285
>gi|407396212|gb|EKF27401.1| meiotic recombination protein spo11, putative [Trypanosoma cruzi
marinkellei]
Length = 455
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 117/246 (47%), Gaps = 33/246 (13%)
Query: 146 STVRKSTITV-KILSLIHQLCLRNIHV----TKRDLFYTDVKLFQDQTQSDAVLDDVACI 200
ST+R+S + V ++ L+ +L +N+H T+RD++Y +L DQ + + + I
Sbjct: 98 STIRESRLRVIRLQLLVLRLLYQNLHCGIISTQRDVYYRLARLVPDQGYINRAIQQLVQI 157
Query: 201 LGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIP----------PNIDRV 250
+G R L V+ +G V G + F +D G G +P N+DR
Sbjct: 158 IGIPRQWLGVVPGTRGCVGGSISFHG----VDLRCYGSEGLPLPTTQEELRVVQENVDRT 213
Query: 251 GDMQSD------------AMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRL 298
D +I++VEK A + RL E+R + R PC+++T+ G P VA R
Sbjct: 214 AGFNKDDVPFIGFEIHGKTRYIIVVEKHAVFFRLMEERIFERLPCVLLTSHGFPTVAART 273
Query: 299 FLRKM-KMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL 357
L + + +P++ALVD +P GL IL Y G+ M +S + WLG+R +
Sbjct: 274 LLSNLHRAAQHVPLVALVDYNPSGLSILQQYKYGAGGMR-ESQYAAVHALHWLGLRTHHI 332
Query: 358 DKYKIP 363
+ + P
Sbjct: 333 TEGRDP 338
>gi|413933053|gb|AFW67604.1| hypothetical protein ZEAMMB73_214766 [Zea mays]
Length = 251
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 86/146 (58%)
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ +++L ++ QL +N H +KRD++Y +F + D ++D+ + C+R +LNV+
Sbjct: 99 NVLLRVLFVVQQLLQQNKHCSKRDIYYMYPSIFVEVAVVDRAINDICILFKCSRHNLNVV 158
Query: 212 AAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIR 271
KG+V+G + F + + C +IP +I+ + D+ S A +IL+VEK+ + R
Sbjct: 159 PVVKGLVMGWIRFMEGEKKVYCITSVNAAFSIPVDIEAIKDVVSVAHYILVVEKETVFQR 218
Query: 272 LAEDRFYNRFPCIIVTAKGQPDVATR 297
LA D+F R CI++T +G PD+ TR
Sbjct: 219 LANDKFCERNRCIVITGRGYPDIPTR 244
>gi|336472796|gb|EGO60956.1| hypothetical protein NEUTE1DRAFT_98113 [Neurospora tetrasperma FGSC
2508]
Length = 454
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 140/283 (49%), Gaps = 21/283 (7%)
Query: 82 TDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSN-QLYVPELDRIVLKDKTTLR 140
+D +LS +++ ET++ I+ G +P R S+N Q++ P +D +
Sbjct: 56 SDDALSKIEALFETIVDAIS------VGSPITIPYRRSTNAQVFDPTASASNPRDGRHMD 109
Query: 141 ----PFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDD 196
P + +R+ +I+ + H+ L VTKR+++Y +++LF+ Q+ D ++D+
Sbjct: 110 SVRFPGRNPQELRRFEALFRIIEISHEALLSGTLVTKRNIYYQNMELFRSQSVVDEMVDN 169
Query: 197 VACILGCTRSSLNVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 255
+A LG R+ LN++A KG+V G++ + G I+C + + R +
Sbjct: 170 LAFTLGVGRNDLNIVATAKGLVAGQVELIMRGGSKINCAESSDSATFRTLSASRYYTVSR 229
Query: 256 DAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMK-MELKLPVLAL 314
IL+ +RL D FY+ KG PD+ATR FL + + +L + AL
Sbjct: 230 AGSGILVT------VRLC-DLFYSNNADNYTQGKGYPDLATRKFLATIHSVRPRLLMFAL 282
Query: 315 VDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL 357
VD DP+G+ +L Y S+ + ++ ++WLGIR SD+
Sbjct: 283 VDFDPHGISVLRTYQYSSQRLDHEERTKVF-GLRWLGIRSSDV 324
>gi|7635881|emb|CAB88597.1| related to MEIOTIC RECOMBINATION PROTEIN REC12 [Neurospora crassa]
Length = 474
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 140/283 (49%), Gaps = 21/283 (7%)
Query: 82 TDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSN-QLYVPELDRIVLKDKTTLR 140
+D +L+ +++ ET++ I+ G +P R S+N Q++ P +D +
Sbjct: 56 SDNALTKIEALFETIVDAIS------VGSPITIPYRRSTNAQVFDPTASASNPRDGRHMD 109
Query: 141 ----PFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDD 196
P + +R+ +I+ + H+ L VTKR+++Y +++LF+ Q+ D ++D+
Sbjct: 110 SVRFPGRNPQELRRFEALFRIIEISHEALLSGTLVTKRNIYYQNMELFRSQSVVDDMVDN 169
Query: 197 VACILGCTRSSLNVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 255
+A LG R+ LN++A KG+V G++ + G IDC + + R +
Sbjct: 170 LAFTLGVGRNDLNIVATAKGLVAGQVELIMRGGSKIDCAESSDSATFRTLSASRYYTVSR 229
Query: 256 DAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMK-MELKLPVLAL 314
IL+ +RL D F + KG PD+ATR FL + + +L + AL
Sbjct: 230 AGSGILVT------VRLC-DLFCSNNADNYTQGKGYPDLATRKFLAAIHSVRPRLLMFAL 282
Query: 315 VDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL 357
VD DP+G+ +L Y GS+ + ++ ++WLGIR SD+
Sbjct: 283 VDFDPHGISVLRTYQYGSQRLDHEERTKVF-GLRWLGIRSSDV 324
>gi|440300288|gb|ELP92777.1| meiotic recombination protein SPO11, putative [Entamoeba invadens
IP1]
Length = 327
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 149/329 (45%), Gaps = 36/329 (10%)
Query: 86 LSAVQSTIETLILQIARSILAGNGFSFQVP--SRASSNQLYVPELDRIVLKDKTTLRPFA 143
+ A Q IE L+LQ R ++ F VP ++ NQ RI K L+
Sbjct: 8 MDAAQQVIEELVLQSIRLLVKKRSF---VPFTTKKVENQ----RQPRITTNSKKQLQ--- 57
Query: 144 SLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGC 203
V +L I+QL N T R+++YT +F Q ++D V++++ +LG
Sbjct: 58 ----------IVVVLGSIYQLLATNRKSTAREIYYTHKAIFDSQKKTDNVIENITLLLGS 107
Query: 204 TRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLV 263
T L++ +G++ G + +ID + P G + +F+L++
Sbjct: 108 TLQGLHISKTPRGLLCGDVALVTQYYIIDFSTTHQLPTVSEPFTLCFGKKR---VFLLII 164
Query: 264 EKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLK 323
EK+A + R+ + + FPC+I+ ++G PD AT + + + + LVD D YG++
Sbjct: 165 EKEAFFERVVQSKVREMFPCLILCSRGFPDNATLDLAKAISSQSGVIPCCLVDGDVYGIE 224
Query: 324 ILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLE 383
I + C + + P+++W +RPS+ + +T+++ K +++L
Sbjct: 225 IFLQFLCN----GWKNPTPQIPNLRWALLRPSEFNGVS-------SLTKREQKIAENMLN 273
Query: 384 EDFVKKNPGWVEELNLMVKTKQKAEIQAL 412
V+ N E+N + +KAE+ L
Sbjct: 274 SSVVQNNEEIKNEINTIAFKNRKAELDEL 302
>gi|145508327|ref|XP_001440113.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834166|emb|CAI44467.1| Spo11-like type II topoisomerase [Paramecium tetraurelia]
gi|124407319|emb|CAK72716.1| unnamed protein product [Paramecium tetraurelia]
Length = 330
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 153/312 (49%), Gaps = 27/312 (8%)
Query: 128 LDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQ 187
LD I+ K+ T F SL + I +++ SL L + + TKR++FY + +FQ Q
Sbjct: 35 LDIIINKNSTQELKFQSLKELCHYLIVMRV-SL--DGILNDSYHTKREIFYMNQNVFQKQ 91
Query: 188 TQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNI 247
+ V+ + + R L++I+A KG+V G LI +D ++ GK + NI
Sbjct: 92 ENLNLVIKQFSHNIQIQRKQLHIISASKGLVCGSLILRKQDIELDLLQLTSQGKGL--NI 149
Query: 248 DRVGDMQSDAMF---ILLVEKDAAYIRLAEDRFYNRF--PCIIVTAKGQPDVATRLFLRK 302
D ++ IL+VEK+ Y L + + F +++T KG P AT+ F++
Sbjct: 150 TEFMDEWLPEIYGKWILVVEKETVYFHLI-NEMHQEFLQNTVLITGKGYPCYATKSFVKY 208
Query: 303 MK-MELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYK 361
+ M +PV D DP+G IL Y G+ S++ N+ P I+WL LD+ +
Sbjct: 209 LSIMNPYIPVYYFGDMDPHGYDILQQYAFGNAYTSHELNNI--PWIQWLN-SYFPLDQLQ 265
Query: 362 IPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLS 421
I ++ +L E LLE+ +K N EE ++ K+K EI+ + FQ LS
Sbjct: 266 IKKKNKLNQRE------LQLLEQ--IKSNANLPEEWKQIMDNKEKYEIEDMQ---FQNLS 314
Query: 422 EVYLPLKLQQKD 433
E L + +Q++D
Sbjct: 315 EFVLQI-MQRQD 325
>gi|358371609|dbj|GAA88216.1| meiotic recombination protein Spo11 [Aspergillus kawachii IFO 4308]
Length = 401
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 145/317 (45%), Gaps = 48/317 (15%)
Query: 133 LKDKTTLR-PFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSD 191
++ TT R P + + T+ +++L+ I + + ++KRD++Y+D F Q D
Sbjct: 78 MQTYTTYRWPGRDGNEAWRFTVALRVLAAIAEAVQEGLVISKRDIYYSDPACFGTQRTVD 137
Query: 192 AVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVG 251
++DD+A +G R++L V AA KG+VVG D + + +P R
Sbjct: 138 TLVDDLAHTMGVDRAALYVEAAAKGLVVGYYRIITRMDAVVDARFSNQDTLVP----RTQ 193
Query: 252 DMQ----SDAMFILLVEKDAAYIRLAEDRFYNRF-----------PCIIV---------T 287
D+ +D + A Y RLA ++ R PC ++
Sbjct: 194 DIHEVDLADVAW-------AVYRRLASSNYHIRSAAGKGILVTVRPCSLIKFQEKYQQFQ 246
Query: 288 AKGQPDVATRLFLRKM-----KMELKLP-VLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
AKG PD+ TR F+RK+ ++ K P ALVD DP G+ I++ Y GS ++++ N
Sbjct: 247 AKGYPDLNTRAFVRKLFDHSRQLTHKRPQFYALVDGDPDGMAIMATYKYGSVAFAHENRN 306
Query: 342 LTTPDIKWLGIRPSDLDKYKIP--EQCRLPMTEQDIKTGKDLLEEDFV----KKNPGWVE 395
L P + WLG++ D+ P + + +T++D K +L + + P W
Sbjct: 307 LNVPGLHWLGLKIPDVVAGADPLEDNTLIRLTKRDRKKIVAMLSRNPIWAADGPEPEWRI 366
Query: 396 ELNLMVKTKQKAEIQAL 412
EL ++ KAE + L
Sbjct: 367 ELQRLLILNVKAETEIL 383
>gi|146174859|ref|XP_001019494.2| Type IIB DNA topoisomerase family protein [Tetrahymena thermophila]
gi|146144754|gb|EAR99249.2| Type IIB DNA topoisomerase family protein [Tetrahymena thermophila
SB210]
Length = 650
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 118/210 (56%), Gaps = 11/210 (5%)
Query: 156 KILSLIHQL--CLRN-IHVTKRDLFYTDVKLF-QDQTQSDAVLDDVACILGCTRSSLNVI 211
K+L I Q+ L+N +TKR++FYT+V+LF Q+Q + ++ + L R+ LN+I
Sbjct: 227 KLLFCIKQILNALKNDFQITKREIFYTNVELFDQNQQNLEKIIQILQNQLRLPRNCLNII 286
Query: 212 AAEKGVVVGRLIF--SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAY 269
A+ KG+V G + F S + ID +K + I P + + +++++ FIL+VEK+ +
Sbjct: 287 ASAKGLVTGNVQFQVSSQAEFIDLSKNFGEVRQIQPK-EEILWIETNSAFILVVEKETVF 345
Query: 270 IRLAEDRFYNRFP-CIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKILSV 327
++ ++ CI++T KG D +T+ +++ + P+ L D DP+GL IL
Sbjct: 346 QKIIAEKDEQLLKNCIMITGKGYGDYSTKQYIKMLTANNPNSPLFYLGDFDPFGLDILFN 405
Query: 328 YGCGSKNMSYDSANLTTPDIKWLGIRPSDL 357
Y GS+N Y NL P+I +LG+ D+
Sbjct: 406 YTFGSENSVYQQDNL--PNIHFLGLSSFDI 433
>gi|71416166|ref|XP_810124.1| meiotic recombination protein SPO11 [Trypanosoma cruzi strain CL
Brener]
gi|70874610|gb|EAN88273.1| meiotic recombination protein SPO11, putative [Trypanosoma cruzi]
Length = 437
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 115/252 (45%), Gaps = 38/252 (15%)
Query: 145 LSTVRKSTITVKILSLIHQLC------LRNIHV----TKRDLFYTDVKLFQDQTQSDAVL 194
++T R+STI L +I +NIH T+RD++Y +L DQ + +
Sbjct: 74 VTTTRRSTIRESRLRVIRLQLLVLRLLYQNIHCGIISTQRDVYYRLARLIPDQGCINRAI 133
Query: 195 DDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPP--------- 245
+ +G R L V+ +G V G + F +D G G +P
Sbjct: 134 QQLVQTIGIPRQWLGVVPGTRGCVGGSISFHG----VDLRCYGSEGLPLPTTQEELRVVQ 189
Query: 246 -NIDRVG------------DMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQP 292
++DR ++ +I++VEK A + RL E+R + R PC+++T+ G P
Sbjct: 190 GDVDRTAASNKDNVPFIGFEIHGKTRYIVVVEKHAVFFRLMEERIFERLPCVLLTSHGFP 249
Query: 293 DVATRLFLRKMKMELK-LPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLG 351
VA R L + + +P++ALVD +P GL IL Y G+ M +S + + WLG
Sbjct: 250 TVAARTLLSNLHRAAQSVPLVALVDYNPSGLSILQQYKYGAGGMR-ESQYVAVHALHWLG 308
Query: 352 IRPSDLDKYKIP 363
+R + + + P
Sbjct: 309 LRTHHIAEGREP 320
>gi|71403068|ref|XP_804374.1| meiotic recombination protein SPO11 [Trypanosoma cruzi strain CL
Brener]
gi|70867310|gb|EAN82523.1| meiotic recombination protein SPO11, putative [Trypanosoma cruzi]
Length = 437
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 118/246 (47%), Gaps = 33/246 (13%)
Query: 146 STVRKSTITV-KILSLIHQLCLRNIHV----TKRDLFYTDVKLFQDQTQSDAVLDDVACI 200
ST+R+S + V ++ L+ +L +NIH T+RD++Y +L DQ + V+ + I
Sbjct: 80 STIRESRLRVIRLQLLVLRLLYQNIHCGIISTQRDVYYRLARLVPDQGCINRVIQQLVQI 139
Query: 201 LGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPP----------NIDRV 250
+G R L V+ +G V G + F +D G G +P ++DR
Sbjct: 140 IGIPRQWLGVVPGTRGCVGGSISFHG----VDLRCYGSEGLPLPTTQEELRVVQGDVDRT 195
Query: 251 G------------DMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRL 298
++ +I++VEK A + RL E+R + R PC+++T+ G P VA R
Sbjct: 196 AASNKDNVPFIGFEIHGKTRYIVVVEKHAVFFRLMEERIFERLPCVLLTSHGFPTVAART 255
Query: 299 FLRKMKMELK-LPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL 357
L + + P++ALVD +P GL IL Y G+ M +S + WLG+R +
Sbjct: 256 LLSNLHRAAQSAPLVALVDYNPSGLSILQQYKYGAGGMR-ESQYAAVHALHWLGLRTHHI 314
Query: 358 DKYKIP 363
+ + P
Sbjct: 315 AEGREP 320
>gi|407832805|gb|EKF98601.1| meiotic recombination protein spo11, putative [Trypanosoma cruzi]
Length = 437
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 119/246 (48%), Gaps = 33/246 (13%)
Query: 146 STVRKSTITV-KILSLIHQLCLRNIHV----TKRDLFYTDVKLFQDQTQSDAVLDDVACI 200
ST+R+S + V ++ L+ +L +NIH T+RD++Y +L DQ + + + I
Sbjct: 80 STIRESRLRVIRLQLLVLRLLYQNIHCGIISTQRDVYYRLARLVPDQGCINRAIQQLVQI 139
Query: 201 LGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPP----------NIDRV 250
+G R L V+ +G V G + F +D G G +P ++DR
Sbjct: 140 IGIPRQWLGVVPGTRGCVGGSISFHG----VDLRCYGSEGLPLPTTQEELRVVQGDVDRT 195
Query: 251 G------------DMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRL 298
++ +I++VEK A + RL E+R + R PC+++T+ G P VA R
Sbjct: 196 AASNKDNVPFIGFEIHGKTRYIIVVEKHAVFFRLMEERIFERLPCVLLTSHGFPTVAART 255
Query: 299 FLRKMKMELK-LPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL 357
L + + +P++ALVD +P GL IL Y G+ M +S + + WLG+R +
Sbjct: 256 LLSNLHRAAQSVPLVALVDYNPSGLSILQQYKYGAGGMR-ESQFVAVHALHWLGLRTHHI 314
Query: 358 DKYKIP 363
+ + P
Sbjct: 315 AEGRDP 320
>gi|258597487|ref|XP_001350573.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|254945371|gb|AAN36253.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 327
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 131/259 (50%), Gaps = 17/259 (6%)
Query: 170 HVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDN-- 227
+ T R +FYT+ KLF +Q S+ ++ + I+ +R +N+ A KG++ G ++ +N
Sbjct: 57 YTTLRQIFYTNPKLFINQRNSNKIIGKLTKIIKTSREQINIYNAPKGIIRGNILLKENKS 116
Query: 228 GDMIDCTK-MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF-PCII 285
+DC + G I P ++ S +IL++EK+ + +L + + + + P I+
Sbjct: 117 SKWVDCMNAFELRGHLICPFGLENINISSGVQYILIIEKETIFYKLLQSNYISTYGPTIL 176
Query: 286 VTAKGQPDVATRLFLRKMKMELK-LPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTT 344
+TAKG PD+ TR L +++ + L + L D D YGL I Y +++ Y +++
Sbjct: 177 ITAKGFPDINTRQLLYEIQKRYRELKIFCLTDYDVYGLSIACTYASKNESKLYYVYDMSI 236
Query: 345 PDIKWLGI-RPSDLDKYKIPEQCRL-PMTEQDIKTGKDLLEEDFVKKN--------PGWV 394
++ WL + P + K + + L +T +DI+ +L + +K N W+
Sbjct: 237 ENLHWLILFTPEEGIKKNVIKNTDLTKLTLKDIRILDNLCAK--LKNNNKYSAAERNNWI 294
Query: 395 EELNLMVKTKQKAEIQALS 413
E ++ M K K EI A++
Sbjct: 295 ENISNMKKFGVKYEIDAIN 313
>gi|342873690|gb|EGU75847.1| hypothetical protein FOXB_13647 [Fusarium oxysporum Fo5176]
Length = 371
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 164/381 (43%), Gaps = 94/381 (24%)
Query: 75 SATCREVTDL-------SLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQL--YV 125
S T E TD S V + IE ++ QI ++ AG S +R S+ +
Sbjct: 27 STTANENTDTNTIINNPSAGTVVTRIEDILAQIISALAAGQELSIPFSARRSTRRAANVR 86
Query: 126 PELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQ 185
PE +++ FA + + IL L H + +TKR +FY LF+
Sbjct: 87 PEQVHFPGRNQQEAVKFARI---------LLILQLSHDALVSGTVLTKRHIFYQHQHLFE 137
Query: 186 DQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLI--FSDNGDMIDCTKMGMGGKAI 243
Q Q D ++DD+A LG +R LN++AA KG + G L+ F D + C+ G G AI
Sbjct: 138 KQGQVDDLVDDIAFSLGISRGDLNIVAASKGALAGPLLIRFRDGSTLNPCS--GDLGVAI 195
Query: 244 PP--NIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLR 301
P +I V D+Q + +IL+VEKD +P
Sbjct: 196 PTVQSISSV-DVQ-NIKWILVVEKD--------------YP------------------- 220
Query: 302 KMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRP------- 354
+LP+L L D DP G+KIL Y GS+ +S++ A+L ++WLGIR
Sbjct: 221 ------QLPLLGLFDYDPDGIKILRCYRHGSERLSHE-ADLGIEALRWLGIRSVHLSRGH 273
Query: 355 --SDLDKYKIPE-------QCRLPMTEQDIKTGKDLLEEDFVKK----NPGWVE------ 395
+ L Y P QCR P+T + + + +KK +P +E
Sbjct: 274 TNTSLSNYGQPSHVSITSIQCRDPVTYLNGRERTAAIST--LKKISLYSPNELEGSELRL 331
Query: 396 ELNLMVKTKQKAEIQALSSFG 416
EL LM+ KAEI+ L G
Sbjct: 332 ELQLMIMLGIKAEIEWLDESG 352
>gi|310799353|gb|EFQ34246.1| type IIB DNA topoisomerase [Glomerella graminicola M1.001]
Length = 420
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 118/229 (51%), Gaps = 25/229 (10%)
Query: 147 TVRKSTITVKILSLIH-QLC--LRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGC 203
TV ++T +++ ++ LC + +TKR+++Y D LF+ Q+ D ++DD+A LG
Sbjct: 101 TVHEATKFSRLMRILQMSLCTLMAGRTITKRNIYYQDENLFKKQSVVDNLVDDLAYTLGL 160
Query: 204 TRSSLNVIAAEKGVVVGRLIF-----------SDNGDMIDCTKMGMGGKAIPPNIDRVGD 252
R L ++A KG+V G ++ S+ +D + G IPP D
Sbjct: 161 GREDLGIVATGKGLVAGPILIRTKTHHAFHSSSEAPPNLDASSSAT-GVLIPPARDISQI 219
Query: 253 MQSDAMFILLVEKDAAYIRLAEDRFYNRFPC---IIVTAKGQPDVATRLFLRKMK-MELK 308
A ++L A + LA R+++ C I+VT KG PD+ T+ FL + ++ +
Sbjct: 220 DFGRARWVL-----ATFRTLAAARYWDASACGSGILVTGKGYPDLLTKQFLHLIHDVKPE 274
Query: 309 LPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL 357
LP++ALVD D G+ I+ Y GS+ +++ N P + WLGI+ DL
Sbjct: 275 LPIMALVDYDSDGIAIMRCYSHGSRGHAHER-NTVVPSMSWLGIKSGDL 322
>gi|209876858|ref|XP_002139871.1| meiotic recombination protein rec12 [Cryptosporidium muris RN66]
gi|209555477|gb|EEA05522.1| meiotic recombination protein rec12, putative [Cryptosporidium
muris RN66]
Length = 372
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 123/246 (50%), Gaps = 23/246 (9%)
Query: 116 SRASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRD 175
S S N + V +L+ ++ K + + S V + T + I + +H L H T RD
Sbjct: 13 SHFSENNI-VCQLEWLIFKLFKNTKKYQCYSKVYQMTCIISITNTLHGLVSEGYHATLRD 71
Query: 176 LFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRL-IFSDN--GDM-- 230
+FY++ L++ QT S+ + + ++ R LNV++ KG++ G + +F + GD
Sbjct: 72 IFYSNPSLYKKQTVSNNTIAMITRLIRIPREFLNVVSTSKGMIRGPISVFGSDLSGDKHN 131
Query: 231 ------IDC-TKMGMGGKAIPPNIDRVG-----DMQSDAMFILLVEKDAAYIRLAEDRFY 278
DC +K+ G +I P I R+ ++ + F+L++EKD + RL E F
Sbjct: 132 RNKIIEFDCLSKIESMGHSISPYICRLMNNWRINIYKNINFVLIIEKDTVFQRLLECNFL 191
Query: 279 NRF--PCIIVTAKGQPDVATRLFLRKMK--MELKLPVLALVDSDPYGLKILSVYGCGSKN 334
F CI++TAKG D+ TR L ++ + K L D D YGL I + Y GS+N
Sbjct: 192 EAFNNSCILLTAKGYSDLPTRALLYQLCNILPYKTLFWILCDYDAYGLTIGATYIMGSQN 251
Query: 335 MS-YDS 339
+ YDS
Sbjct: 252 SAWYDS 257
>gi|171693223|ref|XP_001911536.1| hypothetical protein [Podospora anserina S mat+]
gi|170946560|emb|CAP73361.1| unnamed protein product [Podospora anserina S mat+]
Length = 444
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 146/330 (44%), Gaps = 27/330 (8%)
Query: 46 ATTTTTAAANGASTSSSSSKPLTLSDLSLSATCREVTDLSLSAVQSTIETLILQIARSIL 105
+T +T + G T S S + S++ V ++ + IE+L+ I ++
Sbjct: 5 STNSTEGYSQGTGTHSQDSSGAS----SVNYDAVNVVAVAGNGALDRIESLLEAIVDAVT 60
Query: 106 AGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLR-PFASLSTVRKSTITVKILSLIHQL 164
GN +P R + +R P ++ +K + I+ L H+
Sbjct: 61 TGN--EILIPYRTVRASRPGRSQGPPAARQAGVVRFPGRTIQEAKKFEALLCIIELSHEA 118
Query: 165 CLRNIHVTKR-----DLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVV 219
L + +TKR +++Y LF Q D ++D++A LG R LN++A KG++
Sbjct: 119 LLSGMLITKRSVLIRNIYYQSPDLFGSQAAVDVMVDNLAFTLGVGRGDLNIVATAKGLIS 178
Query: 220 GR-LIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILL---------VEKDAAY 269
G ++ S +G +IDC G +P + + +ILL E + Y
Sbjct: 179 GPFMLISRDGSVIDCGLSHSTGILLPSTSEIRSIGFHEVQWILLNMQRTPEQVTESSSRY 238
Query: 270 -IRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMK-MELKLPVLALVDSDPYGLKILSV 327
+ +D F +F + AKG PD+ATR FL + M L + L D DP G+ I+
Sbjct: 239 GFNITDDVFITKFS--VCQAKGFPDLATRRFLSVVHSMRPSLVIFGLADFDPDGISIVRT 296
Query: 328 YGCGSKNMSYDSANLTTPDIKWLGIRPSDL 357
Y GS+ + +++ T P + WLGI+ DL
Sbjct: 297 YQNGSRRLEHEN-EATVPSLCWLGIKSRDL 325
>gi|326481332|gb|EGE05342.1| meiotic recombination protein spo11 [Trichophyton equinum CBS
127.97]
Length = 387
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 139/282 (49%), Gaps = 26/282 (9%)
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIA 212
+ +IL LI + +KRD+FY D F Q D +DD+A L R++L+V A
Sbjct: 91 VLTRILGLISEAIKGGFISSKRDIFYQDPVYFGSQRLVDRYIDDIAFTLDVDRAALHVAA 150
Query: 213 AEKGVVVGRL-IFSDNGDMID---CTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAA 268
A KG G I NG I CT+ G IP + G S +IL++EK+A
Sbjct: 151 AAKGATGGNFSITLKNGSSIQVGACTE----GILIPRIHEIEGIDISGISWILVIEKEAV 206
Query: 269 YIRLAEDRFYNRFPC---IIVTAKGQPDVATRLFLRKMK---------MELKLPVLALVD 316
+ RL ++N I++T KG PD+++R FLR + + P+ LVD
Sbjct: 207 FHRLITSGYHNASAAGSGILLTGKGYPDLSSREFLRLLSRHEVCNSKMISSPPPIFILVD 266
Query: 317 SDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL--DKYKIPEQCRLPMTEQD 374
SDP G+ I+S Y GS + +A+L P I+W+G++ S + +PM+++D
Sbjct: 267 SDPDGMAIMSTYKYGSMAQVHRNADLNMPSIQWVGLQASKMMSATNHTDMSSLVPMSQRD 326
Query: 375 IKTGKDLLEED--FVKKN--PGWVEELNLMVKTKQKAEIQAL 412
K + +L+ + F + P W +EL ++ KAE++ L
Sbjct: 327 RKKAEAILKRNPSFAEDGPEPTWRKELQSLLVMNLKAELEIL 368
>gi|268536302|ref|XP_002633286.1| C. briggsae CBR-SPO-11 protein [Caenorhabditis briggsae]
Length = 381
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 92/171 (53%), Gaps = 1/171 (0%)
Query: 251 GDMQSDAMFILLVEKDAAYIRLAEDRFYNRFP-CIIVTAKGQPDVATRLFLRKMKMELKL 309
D+ S+A F+L+VEKD + +L ++ F FP I+VT+KG PD+ATR L+
Sbjct: 144 ADIVSEAEFVLVVEKDTIFQKLKDEDFQKMFPRGILVTSKGYPDIATRNVLKMFGERKNF 203
Query: 310 PVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLP 369
P+ L D+DP+G++I Y G+ + + P I+W+G+ P+D + I + +LP
Sbjct: 204 PIYGLFDADPHGIEIYLTYKYGATKETAEGRGAFVPSIQWIGLFPTDFKNFFIDKSQQLP 263
Query: 370 MTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYL 420
+ D ++L+ EL+ M++ K E+++++ G +Y+
Sbjct: 264 LIRSDYVKIENLIPRSIQLGEISVTRELDYMIQNPLKFELESINMCGPEYM 314
>gi|307179771|gb|EFN67961.1| Meiotic recombination protein SPO11 [Camponotus floridanus]
Length = 176
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 95/175 (54%), Gaps = 12/175 (6%)
Query: 162 HQLCLRNIHVTKRDLFYTDVK------LFQDQTQSDAVLDDVACILGCTRSSLNVIAAEK 215
H+L L N TKR FY D+K L Q D ++ VA +L C L ++A K
Sbjct: 5 HRLLLTNTTKTKRS-FYYDLKNEITKRLMPHQRSIDCAVNSVANLLECAPWDLRLLATPK 63
Query: 216 GVVVGRLIFS--DNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
G+V G + + DN +IDC +G G IP V + A F+L++EKDA + +L
Sbjct: 64 GLVAGNMTITLLDN-RVIDCAIVG--GVQIPQITLNVTSICVKANFVLVIEKDAIFQKLL 120
Query: 274 EDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVY 328
E+ CI+VT KG PD+ TR+ + + ++ LPV +VD+DP+G+ I+ +Y
Sbjct: 121 EEDCSRILKCILVTGKGYPDLNTRMLVNILSEKMSLPVYIIVDADPFGVDIMLLY 175
>gi|290985411|ref|XP_002675419.1| type IIB DNA topoisomerase [Naegleria gruberi]
gi|284089015|gb|EFC42675.1| type IIB DNA topoisomerase [Naegleria gruberi]
Length = 1251
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 149/318 (46%), Gaps = 55/318 (17%)
Query: 156 KILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEK 215
++++L++QLC N TKRDL+Y + + +DQTQ D++L D++ R L+++ K
Sbjct: 52 QVMNLVYQLCTLNKFSTKRDLYYCNKPILKDQTQLDSILKDLSSSWRVNRHDLHIVPQSK 111
Query: 216 GVVVGRLIFSDNGDMIDCTKMGM----------GGKAIP--PNIDRVG-DMQSDAMFILL 262
G V G + + + +ID G G +P P++ V + + +++
Sbjct: 112 GEVCGPIAWKEIS-LIDIENRGQQPTTTIVSASKGCNLPSIPHLQIVEFSIPVEVDKVII 170
Query: 263 VEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL------KLPVLALVD 316
VEK++ + L + +I+T+KG PDV TR F+ + ++ L + L D
Sbjct: 171 VEKESVFQVLKSQASSLKDTSLIITSKGYPDVPTRDFIVTLTKQVAKYQRRSLNIFTLTD 230
Query: 317 SDPYGLKILSVYGCGSKNMSYDSANLT-------TPD-----------IKWLGIRPSDLD 358
DPYG +I +VY GS + + NLT T D + W+G+ +D D
Sbjct: 231 GDPYGAEIANVYMNGSLSFENEKENLTIHSCVDSTEDWHYWVLQTCSRMSWIGVHLNDFD 290
Query: 359 -------KYKIPEQCRLPMTEQDIKTGKDL----LE-EDFVKKNPGWVEELNLMVKTKQK 406
K+K C +P+ E D+K L LE +D VK ++LN V+ ++
Sbjct: 291 NAPQLISKWK---DCWMPLEELDLKKINSLNNTQLELDDTVKTQINLQKDLNYKVEIEES 347
Query: 407 AEIQALSSFGFQYLSEVY 424
+E S + Y S+ Y
Sbjct: 348 SETD--SDYCEAYGSDFY 363
>gi|302839577|ref|XP_002951345.1| hypothetical protein VOLCADRAFT_105081 [Volvox carteri f.
nagariensis]
gi|300263320|gb|EFJ47521.1| hypothetical protein VOLCADRAFT_105081 [Volvox carteri f.
nagariensis]
Length = 2553
Score = 97.1 bits (240), Expect = 2e-17, Method: Composition-based stats.
Identities = 52/145 (35%), Positives = 80/145 (55%), Gaps = 6/145 (4%)
Query: 259 FILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVL---ALV 315
++L+VEKDA + RLAEDR ++ PC+++TA+G PD+ATR F ++ P L LV
Sbjct: 132 YLLVVEKDAVFQRLAEDRIWDHLPCVLLTARGMPDLATRAFAARLAASFPAPRLQPVGLV 191
Query: 316 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDI 375
D +P G+ IL+ Y GS + + P ++WLG+R L + P++E+D
Sbjct: 192 DYNPAGVVILATYKYGSDRLGPEGRAHLLPGLRWLGLRSRQLA--DVEHHHLQPLSERD- 248
Query: 376 KTGKDLLEEDFVKKNPGWVEELNLM 400
+ L E PGW EL++M
Sbjct: 249 RVMVRGLRERLGDMEPGWAGELDVM 273
>gi|290979667|ref|XP_002672555.1| predicted protein [Naegleria gruberi]
gi|284086132|gb|EFC39811.1| predicted protein [Naegleria gruberi]
Length = 374
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 147/306 (48%), Gaps = 34/306 (11%)
Query: 91 STIETLILQIARSILAG---NG----FSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFA 143
S IE+ +L+ ++ NG ++ +R SNQ L +I+ K K+
Sbjct: 56 SLIESYVLEFLFKLIENDEKNGQDLILNYSFGTR-DSNQSNGERLHQII-KSKSGTFEKK 113
Query: 144 SL--STVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACIL 201
SL + ++K+ + ++ +H L +T+R+LFY +V F+DQ Q + L V +L
Sbjct: 114 SLKNNHLKKNHLVWLLMKDVHLLLNCRKKITQRELFYMNVTTFRDQIQCNRCLSTVGDVL 173
Query: 202 GCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKA----IP---PNIDRVGDMQ 254
RS LN+I KG I+S++G + +A IP P+ID G++
Sbjct: 174 KVDRSLLNIICMSKG-----FIYSNDGRGNSLLSLNGNKQASVESIPGDFPSIDYFGNVD 228
Query: 255 SDAMFILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMEL-KLPVL 312
+ +L++EKDA + RL ED+ + C+++T G P + TR ++ + +
Sbjct: 229 T----VLIIEKDAIFRRLVEDKIFKLVRNCLLITGCGYPSIVTRYVVKHVSTRFPNARLY 284
Query: 313 ALVDSDPYGLKILSVYGCGSKNMSYDSANLTTP---DIKWLGIRPSDLDKYKIPEQCRLP 369
AL D + +G +I+S Y GS MS + ++WLG+ D+ IP P
Sbjct: 285 ALCDFNIFGYQIMSTYKYGSVEMSRHKVQQESALKDRLQWLGMNYEDVK--DIPHYYNQP 342
Query: 370 MTEQDI 375
+++++I
Sbjct: 343 ISQREI 348
>gi|452823788|gb|EME30795.1| DNA topoisomerase VI subunit A isoform 2 [Galdieria sulphuraria]
Length = 298
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 114/212 (53%), Gaps = 14/212 (6%)
Query: 176 LFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVG--RLIFSDNGDMIDC 233
++Y++ K+ + Q ++D + + IL R L V+A +G++ G R++F NG ID
Sbjct: 87 VYYSEHKVARSQKETDRAIKRLCFILSIPRHYLMVVAGPRGLLAGGLRIVF-QNGTEIDI 145
Query: 234 TKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFP-CIIVTAKGQP 292
K G +IP + ++Q+DA FI++VEK++ + L + +F++RFP I++++ G P
Sbjct: 146 GKTS-SGVSIPEAPYEIENIQTDAQFIMIVEKNSVFHHLTQHQFFDRFPKGILLSSSGYP 204
Query: 293 DVATRLFLRKMKMEL-KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLG 351
A FL +++ + P+L LVD+DPYG+ I + + + S W+G
Sbjct: 205 SQAFSDFLVLLRVNCPEAPILFLVDADPYGVHIALCHLQSLQKEALSSLAF------WIG 258
Query: 352 IRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLE 383
I D+++ K L +T +D + LL+
Sbjct: 259 ISVEDVERVKY--DATLSITARDRAKAQKLLQ 288
>gi|46123143|ref|XP_386125.1| hypothetical protein FG05949.1 [Gibberella zeae PH-1]
Length = 414
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 141/308 (45%), Gaps = 66/308 (21%)
Query: 81 VTDLSLSAVQSTIETLILQIARSILAGN----GFSFQVPSRASSNQLYVPELDRIVLKDK 136
+ + ++ A + IE ++ QI ++ AG FS + PSR +SN PE ++K
Sbjct: 39 IHNTNVGAAVARIEGILEQIIDALAAGQELSIAFSTRKPSRQASNA--TPEQVHFPGRNK 96
Query: 137 TTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDD 196
FA + + IL L H + +TKR +FY LF+ Q + D ++DD
Sbjct: 97 QEATKFARI---------LLILQLSHDALVSGTVLTKRHIFYQHQDLFEKQREVDDLVDD 147
Query: 197 VACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMG-GKAIPPNIDRVGDMQS 255
+A LG +R LN++AA KGV+ G L +G+ G + P + GD+
Sbjct: 148 IAFTLGISRGDLNIVAASKGVLAGPL------------TIGLHDGSTLNPCL---GDL-- 190
Query: 256 DAMFILLVEKDAAYIRLAEDRFYNRFP-CIIVTAKGQ----------------------- 291
+L+ ++Y + + F+ R P C I + G+
Sbjct: 191 -----ILIGVGSSYPNCSVN-FWCRHPRCQIDSGSGEGCRLQITLLLSILEGVSVWPRCT 244
Query: 292 -PDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKW 349
+ TR FL + +LP+L L D DP G+KI+ Y GS +S++ A+L T ++W
Sbjct: 245 CHYLTTRSFLNLVSTRYPQLPILGLFDFDPDGVKIMRCYRYGSDRLSHE-ADLGTETLQW 303
Query: 350 LGIRPSDL 357
LGI+ + L
Sbjct: 304 LGIKSTHL 311
>gi|148674667|gb|EDL06614.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae), isoform CRA_d [Mus musculus]
Length = 182
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Query: 200 ILGCTR-SSLNVIAAEKGVVVGRLIF-SDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDA 257
I+GC + ++ KG++ G L + ++G + CT A+P NI + + +DA
Sbjct: 11 IVGCFQIYYFFQLSTSKGLIAGNLRYMEEDGTRVQCT-CSATATAVPTNIQGMQHLITDA 69
Query: 258 MFILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVD 316
F+L+VEKDA + RL +D F +R PCI+VT KG PD+ TRL ++K+ +PV LVD
Sbjct: 70 KFLLIVEKDATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVD 129
Query: 317 SDPYG 321
+DPYG
Sbjct: 130 ADPYG 134
>gi|367037763|ref|XP_003649262.1| hypothetical protein THITE_2141149 [Thielavia terrestris NRRL 8126]
gi|346996523|gb|AEO62926.1| hypothetical protein THITE_2141149 [Thielavia terrestris NRRL 8126]
Length = 418
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 100/205 (48%), Gaps = 26/205 (12%)
Query: 156 KILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEK 215
+I+ L H L +TKR+++Y + +LF+ Q+ D ++D++A LG R LN++AA K
Sbjct: 120 RIIELSHAALLSGHVITKRNIYYQNPELFRSQSAVDNMVDNLAFTLGVGREDLNIVAAAK 179
Query: 216 GVVVG--RLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLA 273
G+V G LI D G + C D +D +L A IR
Sbjct: 180 GLVSGPIDLILCD-GSIHSC------------------DTSTDTGVLL---PSVASIRQI 217
Query: 274 EDRFYNRFPCIIVTAKGQPDVATRLFLRKMK-MELKLPVLALVDSDPYGLKILSVYGCGS 332
R I AKG PD+ TR FL + + L + LVD DP G+ I+ Y GS
Sbjct: 218 NFRAARWLLVIEKEAKGFPDLTTRRFLCALHSIRPDLGISVLVDFDPDGVAIMRTYRYGS 277
Query: 333 KNMSYDSANLTTPDIKWLGIRPSDL 357
K + ++ N+ TP ++WLGI D+
Sbjct: 278 KRLGHEE-NVATPQLRWLGILSDDI 301
>gi|42524271|ref|NP_969651.1| DNA topoisomerase VI subunit A [Bdellovibrio bacteriovorus HD100]
gi|39576479|emb|CAE80644.1| top6A [Bdellovibrio bacteriovorus HD100]
Length = 387
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 151/326 (46%), Gaps = 39/326 (11%)
Query: 121 NQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHV----TKRDL 176
N LY ++ + DK +R ++S+V+K V +L ++ LRN+ TKR+L
Sbjct: 46 NSLYNAKVGYLTPGDKV-VRTELNVSSVQKLARVVFLLEML----LRNLETGTVNTKREL 100
Query: 177 FYT---DVKL--------FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKG-------VV 218
+Y ++K F DQ +SDA++D + +L R LNV A ++G +V
Sbjct: 101 YYMCKGEIKGNPRLKPLDFDDQPESDAIIDFIGDMLEVYREELNVFANDRGGQTYSQQLV 160
Query: 219 VGRLIFSDNGDMIDCTKMGMGG---KAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAED 275
V + + +ID + +G K P + + D F L+VE + L
Sbjct: 161 VTETLTDGDKAVIDLSTLGTSPFQPKNKPQALKLKAKKKID--FCLIVESEGTANTLVTM 218
Query: 276 RFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLK-ILSVYGCGSKN 334
F R CI++ A+G P R + + ++ EL +P+ D D Y ++ I GS
Sbjct: 219 GFTKRNNCIVMGAQGVPSNGVRGWAKLIQEELDVPMYFFGDLDAYTMQNIFRTLKAGSAA 278
Query: 335 MSYDSANLTTPDIKWLGIRPSDLDKYKIPE---QCRLPMTEQDIKTGKDLLEED---FVK 388
+A+ + P++K+LG+ P D+ KY +P + P + +K KD LE D K
Sbjct: 279 SLIRNADFSAPNVKFLGVLPEDVKKYDLPHYKVKESDPAEARALKKAKDALENDPFFLDK 338
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSS 414
KN + L ++K K + E Q+ S
Sbjct: 339 KNKNLADILRWLIKEKIRCEQQSFFS 364
>gi|440491840|gb|ELQ74447.1| Catalytic subunit of the meiotic double strand break transesterase
[Trachipleistophora hominis]
Length = 292
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 128/282 (45%), Gaps = 34/282 (12%)
Query: 150 KSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLN 209
KS +K +IH + + N+ TKR++FY +F+ Q + ++D A + N
Sbjct: 23 KSVKELKFYEIIHGMLVDNVKKTKREIFYASPNIFKRQETVNKMIDKFAHVHKVRLIDFN 82
Query: 210 VIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAY 269
V A+ KG+ G + F I+ K + + P+++ V D+ +L+VEKD
Sbjct: 83 VSASLKGLFYGEVTF------IESNKAYTLYQNLIPDMNEVTDITCRFSSVLVVEKDCMM 136
Query: 270 IRLAEDRFYNRFPC--IIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSV 327
+ E N P ++VT KG PD T FLR+++ +K + L D DP+GL I
Sbjct: 137 TFIKEVFLRNNRPIDFLLVTGKGYPDYNTLAFLRRLE-HMKCQIYGLFDLDPFGLSIFKN 195
Query: 328 YGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFV 387
Y +M +GI D+ +YKI + + +T++D K L
Sbjct: 196 YKSKINSMV------------RIGITSKDVFEYKIMKNELITLTQRDYKLLTSL------ 237
Query: 388 KKN---PGWVEELNLMVKTKQKAEIQALSS----FGFQYLSE 422
K N + E+++ + QK EI+ +S F QYL +
Sbjct: 238 KNNVIDSEFSEDISFLEGLGQKMEIEIFTSYQTIFIVQYLEK 279
>gi|221061353|ref|XP_002262246.1| type IIB DNA topoisomerase [Plasmodium knowlesi strain H]
gi|193811396|emb|CAQ42124.1| type IIB DNA topoisomerase, putative [Plasmodium knowlesi strain H]
Length = 333
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 132/284 (46%), Gaps = 29/284 (10%)
Query: 168 NIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSD- 226
N H T R +FYT+ LF Q S+ + + I+ R LN+ + KG++ G + +
Sbjct: 57 NTHSTLRQIFYTNPHLFMSQNVSNVAIGKLTKIIKIPRELLNIYNSPKGIIRGNIFLREK 116
Query: 227 -NGDMIDCTKM--GMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF-P 282
+ +DC + G P I + + D ++L+VEK+ + RL + F + + P
Sbjct: 117 KSSPWVDCMSIFETRGHLICPFGISDI-KISPDVKYVLIVEKETIFFRLLQSDFISNYGP 175
Query: 283 CIIVTAKGQPDVATRLFLRKMKMELK-----LPVLALVDSDPYGLKILSVYGCGSKNMSY 337
CI++TA+G P + + R++ E++ L V + D D YGL I Y ++ Y
Sbjct: 176 CILITARGFPGWHSHINTRQLLYEIRRYNKGLKVFCITDYDAYGLSIAFTYTSKMESKVY 235
Query: 338 DSANLTTPDIKWLGI-RPSD-LDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNP---- 391
+++ ++ WL + P + L K+ + + +T +DI+ ++ E VK +
Sbjct: 236 YVEDVSIDNLFWLNLFSPEEGLQKHVLKDIDISKLTLRDIRMLDNICET--VKSSRKFCS 293
Query: 392 ----GWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQ 431
W E N M + K E+ A+ E YL +++++
Sbjct: 294 SEIIAWTEHANHMKTSGMKYEVDAIQDI------EKYLSIRIEE 331
>gi|336269691|ref|XP_003349606.1| SPO11 protein [Sordaria macrospora k-hell]
gi|380093319|emb|CCC08977.1| putative SPO11 protein [Sordaria macrospora k-hell]
Length = 384
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 107/214 (50%), Gaps = 39/214 (18%)
Query: 148 VRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSS 207
+R+ +I+ L H+ L +TKR Q+ D ++D++A LG R
Sbjct: 79 LRRFEALFRIIELSHEALLSGTLITKRS-----------QSMVDEMVDNLAFTLGVGRGD 127
Query: 208 LNVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIP--PNIDRVGDMQSDAMFILLVE 264
LN++A KG++ G++ + G I+C + G +P ++++ D QS ++L++E
Sbjct: 128 LNIVATAKGLIAGQVQLMMRGGTSINCAESSDSGVLLPSISAVEKI-DFQS-VKWLLVIE 185
Query: 265 KDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMK-MELKLPVLALVDSDPYGLK 323
K+ KG PD+ATR FL + ++ +LP+ ALVD D +G+
Sbjct: 186 KE---------------------GKGYPDLATRKFLATLHFVQPRLPMFALVDFDTHGIS 224
Query: 324 ILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL 357
IL Y GS+ + ++ P ++WLGIR SD+
Sbjct: 225 ILRTYQYGSQRLDHEERT-KVPRLRWLGIRSSDV 257
>gi|426404781|ref|YP_007023752.1| DNA topoisomerase VI subunit A [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425861449|gb|AFY02485.1| DNA topoisomerase VI subunit A [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 387
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 150/326 (46%), Gaps = 39/326 (11%)
Query: 121 NQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHV----TKRDL 176
N LY ++ + DK +R ++S+V+K V +L ++ LRN+ TKR+L
Sbjct: 46 NSLYNAKVGYLTPGDKV-VRTELNVSSVQKLARVVFLLEML----LRNLETGTVNTKREL 100
Query: 177 FYT---DVKL--------FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKG-------VV 218
+Y ++K F DQ +SDA++D + +L R LNV A ++G +V
Sbjct: 101 YYMCKGEIKGNPRLKPLDFDDQPESDAIIDFIGDMLEVYREELNVFANDRGGQTYSQQLV 160
Query: 219 VGRLIFSDNGDMIDCTKMGMGG---KAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAED 275
V + +ID + +G K P + + D F L+VE + L
Sbjct: 161 VTETLADGERAVIDLSTLGTSPFQPKNKPQALKLKAKKKID--FCLIVESEGTANTLVTM 218
Query: 276 RFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLK-ILSVYGCGSKN 334
F R CI++ A+G P R + + ++ EL +P+ D D Y ++ I GS
Sbjct: 219 GFTKRNNCIVMGAQGVPSNGVRGWAKLIQEELDVPMYFFGDLDAYTMQNIYRTLKAGSAA 278
Query: 335 MSYDSANLTTPDIKWLGIRPSDLDKYKIPE---QCRLPMTEQDIKTGKDLLEED---FVK 388
+A+ + P++K+LG+ P D+ KY +P + P + +K KD LE D K
Sbjct: 279 SLIRNADFSAPNVKFLGVLPEDVKKYDLPHYKVKESDPAEARALKKAKDALENDPFFLDK 338
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSS 414
KN + L ++K K + E Q+ S
Sbjct: 339 KNKNLSDILRWLIKEKIRCEQQSFFS 364
>gi|225557184|gb|EEH05471.1| meiotic recombination protein spo11 [Ajellomyces capsulatus G186AR]
Length = 377
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 134/286 (46%), Gaps = 49/286 (17%)
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIA 212
+ ++IL I + + +KRD++Y D F Q+ D +DD+AC +G R++L+V A
Sbjct: 130 VLLRILGHISEAIRGDFISSKRDIYYLDPVCFGSQSVVDRCIDDIACTIGVDRTALHVAA 189
Query: 213 AEKGVVVGRLIFSDNGD-MIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIR 271
A KGVVVG + N D MID + GK P D+ + A LL
Sbjct: 190 AAKGVVVGTFNVTLNDDSMIDLA-VHAEGKGYP-------DISTRAFLHLL--------- 232
Query: 272 LAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCG 331
+R P P + L R+ P+ LVD DP G+ I+S Y G
Sbjct: 233 -------SRVP---------PSASGALPFRQP------PIFMLVDGDPDGMAIMSTYKYG 270
Query: 332 SKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQ---CRLPMTEQDIKTGKDLLEEDFV- 387
S+ ++D+ NL +++WLG++ S+L + Q +P+T +D K +D+L V
Sbjct: 271 SRAQAHDNTNLAVHNVQWLGLQASELVPSSLEIQGDDALIPLTSRDRKKAQDMLGRSPVF 330
Query: 388 ---KKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQ 430
P W EL M+ T KAEI+ L + + E +L KLQ
Sbjct: 331 AEDGPEPTWRRELQHMLMTNVKAEIEML--YEREGGIETWLDHKLQ 374
>gi|39794780|gb|AAH64120.1| Spo11 protein [Mus musculus]
Length = 101
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 63/101 (62%)
Query: 335 MSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWV 394
MS+++ NLT P I+WLG+ PSD+ + IP+ +P+T+ D +L+ ++ P W
Sbjct: 1 MSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQMKLDSILKRPYITYQPLWK 60
Query: 395 EELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+EL +M +K KAEIQAL+ YLS VYLP KL+ W+
Sbjct: 61 KELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLRFGGWI 101
>gi|350640202|gb|EHA28555.1| Hypothetical protein ASPNIDRAFT_189316 [Aspergillus niger ATCC
1015]
Length = 326
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 93/171 (54%), Gaps = 14/171 (8%)
Query: 256 DAMFILLVEKDAAYIRLAEDRFYNRFPC---IIVTAKGQPDVATRLFLRKM-----KMEL 307
D ++L++EK+A Y RLA ++ R ++VT KG PD++TR F+RK+ ++
Sbjct: 133 DVAWVLVLEKEAVYRRLASSNYHIRSAAGKGVLVTGKGYPDLSTRAFVRKLFDHSHQLTK 192
Query: 308 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIP--EQ 365
+ A VD DP G+ I++ Y GS ++++ NL P + WLG+R +D+ P +
Sbjct: 193 RPQFYAFVDGDPDGMAIMATYKYGSVAFAHENRNLNVPGLHWLGLRLADVVAGAGPLGDD 252
Query: 366 CRLPMTEQDIKTGKDLLEEDFVKK----NPGWVEELNLMVKTKQKAEIQAL 412
L +T++D K +L ++ V + P W EL M+ KAE++ L
Sbjct: 253 TLLRLTKRDRKKAIAMLSKNPVWEADGPEPEWRVELQRMLMLNVKAEMEIL 303
>gi|82596810|ref|XP_726415.1| topoisomerase VIA [Plasmodium yoelii yoelii 17XNL]
gi|23481817|gb|EAA17980.1| putative topoisomerase VIA [Plasmodium yoelii yoelii]
Length = 205
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 103/196 (52%), Gaps = 4/196 (2%)
Query: 240 GKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLF 299
G I N+ V ++S A +IL+VEK + Y +L E + +N P I++T KG PD ATR
Sbjct: 13 GLMINDNLLNVDKVESLAHYILVVEKYSLYQKLCEKKIWNILPLILITGKGFPDYATRKI 72
Query: 300 LRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDK 359
+ ++ + + D DPYG++I Y G KN + D+KW+G+ +D++
Sbjct: 73 IYELISLFHFECVYVGDYDPYGIRIYLSYKEGCKNNQ--NFVYACKDMKWVGMCFNDINF 130
Query: 360 YKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQY 419
+ P++ L ++ ++ ++LL + + + E++ M + K EI+A G ++
Sbjct: 131 F--PKESLLSLSMKEKHVIENLLNDKKLYYSSKLRTEISEMNEKNIKFEIEAFEYVGMEF 188
Query: 420 LSEVYLPLKLQQKDWL 435
+ YL K+ +K WL
Sbjct: 189 FVKNYLIKKILRKQWL 204
>gi|326500312|dbj|BAK06245.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 264
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 75/135 (55%), Gaps = 2/135 (1%)
Query: 168 NIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDN 227
N H +KRD++Y +F +Q D ++D+ + C+R +LNV+ KG+V+G + F +
Sbjct: 116 NKHCSKRDIYYMYPSMFVEQAIVDRAINDICILFKCSRHNLNVVPVAKGLVMGWIRFVEG 175
Query: 228 GDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCII-- 285
+ C IP +I+ + D+ S A +IL+VEK+A + RLA D+F + CI+
Sbjct: 176 EKKVYCITNVNTAFPIPVSIEAIKDVVSVAHYILVVEKEAVFQRLANDKFCKKNRCIVIT 235
Query: 286 VTAKGQPDVATRLFL 300
VTA V LFL
Sbjct: 236 VTANAGSSVIVTLFL 250
>gi|389586277|dbj|GAB69006.1| type IIB DNA topoisomerase [Plasmodium cynomolgi strain B]
Length = 232
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 87/167 (52%), Gaps = 7/167 (4%)
Query: 168 NIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDN 227
N+H T R +FYT+ KLF Q S+ + + I+ R LN+ + KG++ G L +
Sbjct: 57 NMHSTLRQIFYTNPKLFMSQKVSNVTVGKLTKIIKIPRELLNIYNSPKGIIRGNLFLREK 116
Query: 228 GD--MIDCTKM--GMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF-P 282
+DC + G P + + ++ D ++L+VEK+ + RL + F + + P
Sbjct: 117 NSSPWVDCMSIFETRGHLICPFGVSDI-EISPDVKYVLIVEKETIFFRLLQSDFISNYGP 175
Query: 283 CIIVTAKGQPDVATRLFLRKMKMELK-LPVLALVDSDPYGLKILSVY 328
CI++TA+G PD+ TR L +++ K L + L D D YGL I Y
Sbjct: 176 CIMITARGFPDLNTRQLLYEIRRCNKALKIFCLTDYDAYGLSIAFTY 222
>gi|340053825|emb|CCC48119.1| putative meiotic recombination protein spo11 [Trypanosoma vivax
Y486]
Length = 459
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 101/224 (45%), Gaps = 34/224 (15%)
Query: 172 TKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMI 231
T+RD++Y +L DQ + L + LG R L V+ +G V G L F D+
Sbjct: 128 TQRDIYYRLSRLVPDQGCVNRTLQQLVQQLGIPRQWLGVVPGSRGCVGGTLSFCGV-DLR 186
Query: 232 DCTKMGM-------------------GGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRL 272
T G G ++ N ++ + +I++VEK A + RL
Sbjct: 187 QHTSGGFPLPVRQEELRVTRRRLPREGTTSVSSNTHEGFELFGETRYIIVVEKHAVFFRL 246
Query: 273 AEDRFYNRFPCIIVTAKGQPDVATRLF---LRKMKMELK------LPVLALVDSDPYGLK 323
E+R ++ PC+++T+ G P A L + ME + +PV+ALVD +P GL
Sbjct: 247 MEERIFDLVPCVLLTSHGFPTAAAITLLSNLHRATMEEEGNKKALVPVVALVDYNPSGLS 306
Query: 324 ILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR 367
IL Y + N+ +S + ++WLGIR + + E CR
Sbjct: 307 ILQQYKHNAGNIQ-ESRLVAVHALRWLGIRGCHI----VEEGCR 345
>gi|403366622|gb|EJY83114.1| DNA topoisomerase VI, subunit A [Oxytricha trifallax]
Length = 314
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 130/269 (48%), Gaps = 25/269 (9%)
Query: 166 LRNIH---VTKRDLFYTDVKLFQDQTQS-DAVLDDVACILGCTRSSLNVIAAEKGVVVGR 221
+R IH V KR ++Y+ + T D + ++ IL R L + A+ KG++ G
Sbjct: 16 MRTIHQLKVNKRAVYYSLIDSNIGSTMELDGYISEICLILSLHRDDLLIKASSKGLMFGG 75
Query: 222 LIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFY--N 279
I SD + + ++ + +++ + A +LLVEKD + RL + +++ N
Sbjct: 76 GIDSDLSEELLINQLQIPSLTDEQFYEKILP-KLKAKVVLLVEKDTVFSRLTQQQYFIQN 134
Query: 280 RFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDS 339
R +++T KG PD AT+ F++ + LP+L L D+D +G I Y G++N S D
Sbjct: 135 REHILLLTGKGYPDYATKRFVKMLSQIAHLPILYLGDADSFGADIYFQYAFGNQNSSVDQ 194
Query: 340 ANLTTPDIKWLG--------IRPSDL---DKYKIPEQCRLP----MTEQDIKTGKDLLEE 384
++ P I+W+G I+ DL DK KI P +EQ+ + + +
Sbjct: 195 DDINCPLIQWIGPFMQDFKDIKKQDLSEKDKLKIYSLLTKPYFKNYSEQECHSE---IHK 251
Query: 385 DFVKKNPGWVEELNLMVKTKQKAEIQALS 413
+K + L LM + +K EI+AL+
Sbjct: 252 SILKNLQLYKGHLILMERENKKFEIEALT 280
>gi|145967218|gb|ABP99001.1| meiotic transesterase [Cryptosporidium parvum]
Length = 360
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 19/224 (8%)
Query: 143 ASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILG 202
S S + ST V +++++H+ H T RD++Y + L+ Q+ SD + V ++
Sbjct: 47 GSRSQIYNSTCLVSVMNILHRNVKEGFHXTLRDIYYNNPSLYTKQSISDKYIAQVTHLVQ 106
Query: 203 CTRSSLNVIAAEKGVVVGRLI-------FSDNGDMI--DCTKM--GMGGKAIPPNIDRVG 251
R LNV++ +G + G LI F + + DC + MG P +
Sbjct: 107 TPRELLNVVSTARGRIRGPLIIQGYEIGFCERRREVRLDCMSIFESMGHSISPYLFKGMN 166
Query: 252 DMQ----SDAMFILLVEKDAAYIRLAEDRFYNRF--PCIIVTAKGQPDVATRLFLRKMKM 305
++ S F+L+VEKD + RL E F+ F CI++TA+G D+ TR L ++
Sbjct: 167 GLKFSYYSKIKFVLVVEKDTIFQRLLEFGFHKEFDNSCILITARGFSDLPTRTLLYRLSQ 226
Query: 306 EL--KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDI 347
+L L D D +GL I + Y G K+ ++ ++ + P +
Sbjct: 227 DLPEDTKFWILCDYDCFGLSIAATYIMGGKSGTWYDSSFSIPKL 270
>gi|391874466|gb|EIT83348.1| catalytic subunit of the meiotic double strand break transesterase
[Aspergillus oryzae 3.042]
Length = 389
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 131/279 (46%), Gaps = 23/279 (8%)
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIA 212
+ ++L+++ + V+KRD++Y+D F Q D ++DD+A +G RS+LNV A
Sbjct: 98 VVFRVLAVVADAIGTGVVVSKRDIYYSDPACFGTQRIVDTIVDDLAYTIGVDRSALNVEA 157
Query: 213 AEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDA---A 268
A KG+V G + + +G+ +D ++ +P + D SDA ++L++EK+
Sbjct: 158 AAKGLVAGYCSLLTKSGETMDV-QLPAKDCLVPSSQDDRELNISDASWVLIIEKEVQPLP 216
Query: 269 YIRLAEDRFYNR------FPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGL 322
Y + E +R II+ + Q + L + ++ LVD+DP G+
Sbjct: 217 YDIITETHLVHRPSTADSQEVIIILERPQEKGFSSLSDKALRF------YGLVDNDPDGM 270
Query: 323 KILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRL--PMTEQDIKTGKD 380
I+S+Y GS + + L P + WLG+R SD+ R +T +D
Sbjct: 271 AIMSIYKYGSMAHTNQNGRLNIPCLWWLGLRTSDVVSGAPSNDDRALNRLTVRDRTKIVT 330
Query: 381 LLEEDFVKKNPG----WVEELNLMVKTKQKAEIQALSSF 415
+L + V G W EL M+ KAEI+ L +
Sbjct: 331 MLSNNPVWAAEGPELEWRAELQQMLMLNLKAEIEILYDW 369
>gi|67598934|ref|XP_666249.1| SPO11 protein [Cryptosporidium hominis TU502]
gi|54657208|gb|EAL36020.1| SPO11 protein [Cryptosporidium hominis]
Length = 360
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 19/224 (8%)
Query: 143 ASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILG 202
S S + ST V +++++H+ H T RD++Y + L+ Q+ SD + V ++
Sbjct: 47 GSRSQIYNSTCLVSVMNILHRNVKEGFHSTLRDIYYNNPSLYTKQSISDKYIAQVTHLVQ 106
Query: 203 CTRSSLNVIAAEKGVVVGRLI-------FSDNGDMI--DCTKM--GMGGKAIPPNIDRVG 251
R LNV++ +G + G LI F + + DC + MG P +
Sbjct: 107 TPRELLNVVSTARGRIRGPLIIQGYEIGFCERRREVRLDCMSIFESMGHSISPYLFKGMN 166
Query: 252 DMQ----SDAMFILLVEKDAAYIRLAEDRFYNRF--PCIIVTAKGQPDVATRLFLRKMKM 305
++ S F+L+VEKD + RL E F+ F CI++TA+G D+ TR L ++
Sbjct: 167 GLKFSYYSKIKFVLVVEKDTIFQRLLEFGFHKEFDNSCILITARGFSDLPTRTLLYRLSQ 226
Query: 306 EL--KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDI 347
+L L D D +GL I + Y G K+ ++ ++ + P +
Sbjct: 227 DLPEDTKFWILCDYDCFGLSIAATYIMGGKSGTWYDSSFSIPKL 270
>gi|66359728|ref|XP_627042.1| topoisomerase VIA/SpoII nuclease subunit, toprim domain
[Cryptosporidium parvum Iowa II]
gi|46228480|gb|EAK89350.1| topoisomerase VIA/SpoII nuclease subunit, toprim domain
[Cryptosporidium parvum Iowa II]
Length = 360
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 19/224 (8%)
Query: 143 ASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILG 202
S S + ST V +++++H+ H T RD++Y + L+ Q+ SD + V ++
Sbjct: 47 GSRSQIYNSTCLVSVMNILHRNVKEGFHSTLRDIYYNNPSLYTKQSISDKYIAQVTHLVQ 106
Query: 203 CTRSSLNVIAAEKGVVVGRLI-------FSDNGDMI--DCTKM--GMGGKAIPPNIDRVG 251
R LNV++ +G + G LI F + + DC + MG P +
Sbjct: 107 TPRELLNVVSTARGRIRGPLIIQGYEIGFCERRREVRLDCMSIFESMGHSISPYLFKGMN 166
Query: 252 DMQ----SDAMFILLVEKDAAYIRLAEDRFYNRF--PCIIVTAKGQPDVATRLFLRKMKM 305
++ S F+L+VEKD + RL E F+ F CI++TA+G D+ TR L ++
Sbjct: 167 GLKFSYYSKIKFVLVVEKDTIFQRLLEFGFHKEFDNSCILITARGFSDLPTRTLLYRLSQ 226
Query: 306 EL--KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDI 347
+L L D D +GL I + Y G K+ ++ ++ + P +
Sbjct: 227 DLPEDTKFWILCDYDCFGLSIAATYIMGGKSGTWYDSSFSIPKL 270
>gi|406898981|gb|EKD42386.1| hypothetical protein ACD_73C00182G0002, partial [uncultured
bacterium]
Length = 329
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 136/290 (46%), Gaps = 36/290 (12%)
Query: 118 ASSNQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHV----TK 173
A N Y P++ + DK L ++S+V+K + + +L LI LRN+ V TK
Sbjct: 36 ALDNSFYDPKVGYLTAGDKRVLTEL-NVSSVKKMSRCIFVLELI----LRNLEVGATNTK 90
Query: 174 RDLFYT---DVKL--------FQDQTQSDAVLDDVACILGCTRSSLNVIAAEKG------ 216
R+L+Y ++K F+DQ++SD ++D + ++ C R LN A ++G
Sbjct: 91 RELYYISKGEIKHNPFLKPLDFEDQSESDEIIDFICEMIECYREDLNCFANDRGGQTYSQ 150
Query: 217 -VVVGRLIFSDNGDMIDCTKMGMG---GKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRL 272
++V + ID + +G K P ++ + D + L+VE + L
Sbjct: 151 QLIVMETMPDGGKATIDLSMLGTAPFQPKNRPQSLKLKVKKKID--YCLIVESEGTANTL 208
Query: 273 AEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLK-ILSVYGCG 331
F R I++ A+G P A R + + ++ EL +P D D Y ++ I G
Sbjct: 209 VNSGFTKRHNVILLGAQGVPSNAVRGWTKLIQDELSVPCYFFGDLDAYTMQNIFRTLKAG 268
Query: 332 SKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDL 381
S +A+ + P++++LG+ P D+ KY +P+ + E DI G+ L
Sbjct: 269 SAASLIRNADFSAPEVRFLGVLPEDIKKYDLPD---YGVKESDITEGRAL 315
>gi|384252434|gb|EIE25910.1| DNA topoisomerase IV, alpha subunit [Coccomyxa subellipsoidea
C-169]
Length = 252
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 109/244 (44%), Gaps = 42/244 (17%)
Query: 183 LFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDN--GDMIDCTKMGMGG 240
+F+ Q + + DVA ++ L A +G V G L+ + G+ +DC+
Sbjct: 14 IFKTPEQVNQAIQDVASMVQVPSMLLGFSCASRGAVYGPLLVREEAAGEWMDCS------ 67
Query: 241 KAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFL 300
MF+++VEKDA + RL +D F I+VTAKG PD+ATR FL
Sbjct: 68 -----------------MFVVVVEKDAIFQRLVDDGFAEHIGGILVTAKGMPDMATRAFL 110
Query: 301 RKMKMELK--LPVLA---------LVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKW 349
+ L P+ +VD +P G+ I VY GS SA + W
Sbjct: 111 HALTQALPHLTPIAGKSLHNGTTLMVDWNPAGVNIYCVYKYGSTRR--HSAQYGLSGLTW 168
Query: 350 LGIRPSDLDKYKIPEQC-RLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAE 408
L R + L + +P + P+T +D K L+ + P + EL+ M++ KAE
Sbjct: 169 LAARAALL--HGVPNHVLQGPLTTRD-KALTVSLKAGPLSAEPAVLAELDAMLEMDAKAE 225
Query: 409 IQAL 412
I+AL
Sbjct: 226 IEAL 229
>gi|253744228|gb|EET00462.1| Spo11 Type II DNA topoisomerase VI subunit A [Giardia intestinalis
ATCC 50581]
Length = 348
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 117/259 (45%), Gaps = 28/259 (10%)
Query: 171 VTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRL-IFSDNGD 229
+ R L+YT L+ QTQS+A++ + G R ++ A KG+++G + + G
Sbjct: 81 INIRSLYYTAPSLYGSQTQSNALITEFCLGYGIEREMMHYRATAKGLLLGNCSVVTQVGT 140
Query: 230 MIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAE------DRFYNRFPC 283
+ T + + I P+ + + +DA F L++EKD + L + DR F
Sbjct: 141 IAVSTLVAV---PISPHFFYIQQIHTDAQFTLVIEKDTIFEHLVDNYEAIRDRLGRNF-- 195
Query: 284 IIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSA--- 340
+++T KG PD ATR + + ++P+L L D D +G+ IL Y GS + S
Sbjct: 196 MVITGKGYPDAATRALVSFLD-SCRIPILGLADGDAHGMNILCTYAYGSATTTKRSVVPN 254
Query: 341 NLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLM 400
+ P + +GI S + + + +K + D N + L +
Sbjct: 255 HYVAPSLVPVGIFSSQIQR-----------SAGSLKGSRHCDATDLKLYNA-LIARLTAL 302
Query: 401 VKTKQKAEIQALSSFGFQY 419
+++ E+Q L++ G QY
Sbjct: 303 GRSEWAGEVQNLAALGMQY 321
>gi|388580953|gb|EIM21264.1| DNA topoisomerase IV, alpha subunit [Wallemia sebi CBS 633.66]
Length = 290
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 92/171 (53%), Gaps = 10/171 (5%)
Query: 254 QSDAMFILLVEKDAAYIRLAEDRFYN---RFPCIIVTAKGQPDVATRLFLRKMKMEL--K 308
+S F+L+VEK+ + L E +F II+T KG PD+ATR L + +
Sbjct: 36 KSQVSFVLVVEKETVFSALREIQFSRSSVHGHNIILTGKGYPDIATRDLLNHLANVIPEN 95
Query: 309 LPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRL 368
+P + LVDSDP+GL+I Y GS+NM + + P +K +G+R ++ D IP L
Sbjct: 96 VPFIGLVDSDPHGLRIFLTYKFGSENMQQEKLQMACPRLKLMGLRNAEFDLLCIPPNQAL 155
Query: 369 PMTEQDIKTGKDLLEE-DFVKKNPGWVEEL----NLMVKTKQKAEIQALSS 414
+T+++ K +++ D + ++ V+EL MV +K EI+AL S
Sbjct: 156 SITKKEKTICKKMIQRLDLMDRSAFGVKELKDEIKQMVTYDRKFEIEALYS 206
>gi|405124141|gb|AFR98903.1| endodeoxyribonuclease [Cryptococcus neoformans var. grubii H99]
Length = 511
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 124/267 (46%), Gaps = 53/267 (19%)
Query: 155 VKILSLIHQLCL-RNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAA 213
+++ S++++ L RN+ +T RD++Y D +LF+ Q V+D A G SS VI
Sbjct: 248 MRVASILYEAILDRNV-ITLRDVYYRDKQLFERQR----VVDKCASAKGLIASSSLVIRY 302
Query: 214 EKG----VVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAY 269
G + R D + ID + P +D ++L+VEKD
Sbjct: 303 RTGDEIVLSATRANLIDPAEKIDVIEA-------PNGLD----------WVLIVEKDG-- 343
Query: 270 IRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELK-LPVLALVDSDPYGLKILSVY 328
KG PD+ATR LR + + + ALVD+DP+GLKILS Y
Sbjct: 344 -------------------KGFPDLATRQILRLIADAFPCVKMYALVDADPHGLKILSTY 384
Query: 329 GCGSKNMSY--DSANLTTPD-IKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEED 385
GSK +Y D +L D ++WLG+R SD I +P+ + DI+ +L +
Sbjct: 385 MYGSKANAYSTDYEDLPLRDRVQWLGLRASDWSYLHINYDDLIPLEQSDIQMAMSMLRDH 444
Query: 386 FVKKNPGWVEELNLMVKTKQKAEIQAL 412
V W EL+ M+ +KAEI+ +
Sbjct: 445 QVLP-VDWKRELSHMLHLHRKAEIEII 470
>gi|72389502|ref|XP_845046.1| meiotic recombination protein SPO11 [Trypanosoma brucei TREU927]
gi|62176729|gb|AAX70829.1| meiotic recombination protein SPO11, putative [Trypanosoma brucei]
gi|70801580|gb|AAZ11487.1| meiotic recombination protein SPO11, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 431
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 31/208 (14%)
Query: 172 TKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMI 231
T+RD++Y V+ F DQ + V+ + LG R L V+ +G V G L F I
Sbjct: 96 TQRDVYYRLVRFFPDQGCVNRVIQQLVQQLGLPRQLLGVVPGTRGCVGGSLSFHG----I 151
Query: 232 DCTKMGMGGKAIP-----------------------PNIDRVGDMQSDAMFILLVEKDAA 268
D + G +P P+ ++ +D +I++VEK A
Sbjct: 152 DLRRYSSEGLPLPVLREELSVVWRPKHECESIPVHSPDDIEGFELHNDIRYIIVVEKHAV 211
Query: 269 YIRLAEDRFYNRFPCIIVTAKGQPDVATRLF---LRKMKMELKLPVLALVDSDPYGLKIL 325
+ RL E++ ++R C+++T+ G P A L + ++ +PV+ALVD +P GL IL
Sbjct: 212 FFRLMEEKIFDRVSCVLLTSHGFPTAAALTLLSNLHRTATDVGVPVVALVDYNPSGLSIL 271
Query: 326 SVYGCGSKNMSYDSANLTTPDIKWLGIR 353
Y + + ++ + ++WLG+R
Sbjct: 272 QQYKHDTGRIQ-ENRYASVHSLRWLGLR 298
>gi|145967212|gb|ABP98998.1| meiotic transesterase, partial [Trypanosoma brucei]
Length = 463
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 31/208 (14%)
Query: 172 TKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMI 231
T+RD++Y V+ F DQ + V+ + LG R L V+ +G V G L F I
Sbjct: 159 TQRDVYYRLVRFFPDQGCVNRVIQQLVQQLGLPRQLLGVVPGTRGCVGGSLSFHG----I 214
Query: 232 DCTKMGMGGKAIP-----------------------PNIDRVGDMQSDAMFILLVEKDAA 268
D + G +P P ++ +D +I++VEK A
Sbjct: 215 DLRRYSSEGLPLPVLREELSVVWRPKHECESIPVHSPEDIEGFELHNDIRYIIVVEKHAV 274
Query: 269 YIRLAEDRFYNRFPCIIVTAKGQPDVATRLF---LRKMKMELKLPVLALVDSDPYGLKIL 325
+ RL E++ ++R C+++T+ G P A L + ++ +PV+ALVD +P GL IL
Sbjct: 275 FFRLMEEKIFDRVSCVLLTSHGFPTAAALTLLSNLHRTATDVGVPVVALVDYNPSGLSIL 334
Query: 326 SVYGCGSKNMSYDSANLTTPDIKWLGIR 353
Y + + ++ + ++WLG+R
Sbjct: 335 QQYKHDTGRIQ-ENRYASVHSLRWLGLR 361
>gi|452823789|gb|EME30796.1| DNA topoisomerase VI subunit A isoform 1 [Galdieria sulphuraria]
Length = 232
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 119/230 (51%), Gaps = 23/230 (10%)
Query: 210 VIAAEKGVVVG--RLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDA 267
V+A +G++ G R++F NG ID K G +IP + ++Q+DA FI++VEK++
Sbjct: 2 VVAGPRGLLAGGLRIVF-QNGTEIDIGKTS-SGVSIPEAPYEIENIQTDAQFIMIVEKNS 59
Query: 268 AYIRLAEDRFYNRFP-CIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKIL 325
+ L + +F++RFP I++++ G P A FL +++ + P+L LVD+DPYG+ I
Sbjct: 60 VFHHLTQHQFFDRFPKGILLSSSGYPSQAFSDFLVLLRVNCPEAPILFLVDADPYGVHIA 119
Query: 326 SVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLL--- 382
+ + + S W+GI D+++ K L +T +D + LL
Sbjct: 120 LCHLQSLQKEALSSLAF------WIGISVEDVERVKY--DATLSITARDRAKAQKLLQML 171
Query: 383 -EEDFVKK--NPGWVEELNLMVKTKQKAEIQAL-SSFGFQ--YLSEVYLP 426
E + ++K EL ++ ++KAEI+AL S +L YLP
Sbjct: 172 REVNSIEKTVEAELSSELERILTLEKKAEIEALCESIATHNCFLCSSYLP 221
>gi|429852423|gb|ELA27559.1| meiosis-specific topoisomerase spo11 [Colletotrichum
gloeosporioides Nara gc5]
Length = 348
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 114/294 (38%), Gaps = 93/294 (31%)
Query: 150 KSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLN 209
K T +KI+ L H L VTKR+LFY LF+ Q D ++DD++ LG R LN
Sbjct: 108 KFTQVLKIIHLSHSSLLSGNPVTKRNLFYQCPDLFKTQAIIDGLVDDISYTLGIGRDDLN 167
Query: 210 VIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAY 269
ID + G G
Sbjct: 168 ---------------------IDTSSAGQG------------------------------ 176
Query: 270 IRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMK-MELKLPVLALVDSDPYGLKILSVY 328
I++T KG PD+ T+ FL + + +LP+ LVD DPYG+ I+ Y
Sbjct: 177 --------------ILITGKGVPDLQTKQFLHLLHSAKPELPIYGLVDFDPYGVNIMRCY 222
Query: 329 GCGSKNMSYDSANLTTPDIKWLGIRPSDL-------DKYKIPEQCRLP------------ 369
GS+ +++ +T P ++WLGI+ DL D E L
Sbjct: 223 SHGSRGHAHE-VGVTVPSMQWLGIKSGDLVGRQDLEDDDAHAEVLDLTVFRRQQSESNFE 281
Query: 370 ----MTEQDIKTGKDLLE---EDFVKKNPGWVEELNLMVKTKQKAEIQALSSFG 416
+ E+D K K LL +D + N EL +M+ KAEIQA+ G
Sbjct: 282 ATDVLKERDRKIAKTLLRNIPDDLDEYNIQCRRELQIMLFLNVKAEIQAVDDAG 335
>gi|359415981|ref|ZP_09208360.1| DNA topoisomerase VI subunit A [Candidatus Haloredivivus sp. G17]
gi|358033656|gb|EHK02182.1| DNA topoisomerase VI subunit A [Candidatus Haloredivivus sp. G17]
Length = 128
Score = 84.0 bits (206), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/111 (39%), Positives = 60/111 (54%)
Query: 236 MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVA 295
MG G AIP +D + +++A FIL+VE A RL E+ F+ II+ GQP
Sbjct: 1 MGSAGMAIPSIVDHLEFEENNADFILVVETSAMVNRLVEEDFHEEHNAIIIGTGGQPARG 60
Query: 296 TRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPD 346
R + M EL+LPV D DP+G I SV GS ++++ S L TPD
Sbjct: 61 ARRLINMMHNELELPVYVFTDGDPWGYYIYSVLKSGSMSLAFQSDRLATPD 111
>gi|429962600|gb|ELA42144.1| hypothetical protein VICG_00787 [Vittaforma corneae ATCC 50505]
Length = 270
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 136 KTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLD 195
++ L F + ++K +K L IH L + KR LFY V +F+ Q + ++
Sbjct: 13 ESVLEGFIDETAMKK----IKFLQSIHSLIKSGQSMNKRTLFYDSVPIFKTQNSVNKLVK 68
Query: 196 DVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 255
+ + GC + N+ ++ KG+ GR+I M + ++ GK + P++D V +++
Sbjct: 69 RYSRVFGCEQRDFNIKSSLKGIFHGRIILI----MKNSKRIEYEGKNLIPDMDDVIEIKH 124
Query: 256 DAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 315
+ +++EKD + R+ +R+ + V KG P T FL+ ++ +K + L
Sbjct: 125 NYKVAMVIEKDTVFSRVESERY------LTVCGKGYPCQNTVKFLKMIESTVK--IYCLT 176
Query: 316 DSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQ 365
D DPYGL I VY D+ +G++ D+ KYK+ +
Sbjct: 177 DFDPYGLHIFLVYK-------------KKIDMVRIGLKIEDILKYKVKKH 213
>gi|358392673|gb|EHK42077.1| hypothetical protein TRIATDRAFT_166457, partial [Trichoderma
atroviride IMI 206040]
Length = 375
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 129/312 (41%), Gaps = 65/312 (20%)
Query: 157 ILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKG 216
IL L H + I +TKR +FY +LF Q D ++D +A LG R LN++A+ KG
Sbjct: 62 ILQLAHDALVSGIVLTKRHIFYQHQELFCSQRTVDKLVDSLALALGIHRDELNIVASSKG 121
Query: 217 VVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDR 276
V G L D + +G P D V + A + D L E R
Sbjct: 122 VFSGSLSIRLQDDRV----IG------PATGDAVCKLAYTACWD-HTTNDWINCHL-ELR 169
Query: 277 FYNRFPC----------IIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKIL 325
++ PC ++ PD+ T FL+ +++ ++P+ ALVD DP GL I
Sbjct: 170 SHSMDPCCGISFFDIFIVLANVSWYPDILTCSFLQLIRVNCPQIPIFALVDYDPDGLNIF 229
Query: 326 SVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKI---------------------PE 364
Y S N + ++T P I WLGI+ DL +Y++ P
Sbjct: 230 RCYRFRS-NTAIQETDVTAPGICWLGIKSQDLLEYELYLNTLIRHSSPSRSQQSPTSQPS 288
Query: 365 Q-------------CRLP---MTEQDIKTGKDLLEEDFVKKNPGWV----EELNLMVKTK 404
Q CR P ++ +D K +LE+ K+ V EL +M+
Sbjct: 289 QESNSSKTSISSTDCRDPVSLLSTRDRKVAVGILEKLLDVKDDAEVVKVQRELQVMLMMG 348
Query: 405 QKAEIQALSSFG 416
KAEIQ L G
Sbjct: 349 VKAEIQWLDEAG 360
>gi|406605807|emb|CCH42798.1| Type II DNA topoisomerase VI subunit A [Wickerhamomyces ciferrii]
Length = 389
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 103/202 (50%), Gaps = 21/202 (10%)
Query: 141 PFASLSTVRKSTITVKILS-LIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVAC 199
P +L+ R+ + +K++S LI L + I TKRDL+Y DV LF++Q+ D +++ +
Sbjct: 79 PSNNLNESRQFAMCLKLISMLIENLKNKKI-TTKRDLYYQDVSLFENQSNVDKLINSICK 137
Query: 200 ILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAM- 258
LG + +AA+KG+ G + D+ID + M I + + S+
Sbjct: 138 SLGFNNLEIGAVAAQKGLCFGNI------DIIDISNNDMKSFNIKDGCFLIPRINSNFKI 191
Query: 259 -------FILLVEKDAAYIRLAED-RFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KL 309
+IL+VEKD+ + + + + N +I+T KG PD T++FL + + ++
Sbjct: 192 IIKHPIDYILIVEKDSIFQLICDPLKMSNN---LIITGKGFPDNNTKMFLNLLSKQYPQI 248
Query: 310 PVLALVDSDPYGLKILSVYGCG 331
P+ D DP+GL I+ Y G
Sbjct: 249 PIYGFADIDPHGLNIMKQYKDG 270
>gi|429965041|gb|ELA47038.1| hypothetical protein VCUG_01483 [Vavraia culicis 'floridensis']
Length = 316
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 154/324 (47%), Gaps = 39/324 (12%)
Query: 114 VPSRASSN-QLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVT 172
V S S+N +Y+ +L +I+ ++KT A +S +K +IH + + NI T
Sbjct: 6 VLSLKSTNIYVYMHKLIKII-REKTA--KLAHNIKNDRSIKELKFYEIIHGMLVDNIKKT 62
Query: 173 KRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMID 232
KR++FY +F+ Q + ++D A + NV A+ KG+ G + F ++G
Sbjct: 63 KREIFYASPNIFKRQETVNKMIDRFAHLHKIRLIDFNVAASLKGLFYGEITFIEHG---- 118
Query: 233 CTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNR--FPCIIVTAKG 290
K + + P+++ + +++ +L+VEKD + E N ++VT KG
Sbjct: 119 --KTYTLHQNLIPDMNEIVEIRCRFSSVLVVEKDCMMTFIKEVFLRNNKTINFLLVTGKG 176
Query: 291 QPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYG---CGSKNMSYDSANLTTPDI 347
PD T FL++++ + + L D DP+GL I Y CG +
Sbjct: 177 YPDHNTLAFLQRLE-HMNCQIYGLFDLDPFGLNIFRNYKSKICG---------------M 220
Query: 348 KWLGIRPSDLDKYKIPEQCRLPMTEQDIK--TGKDLLEEDFVKKNPGWVEELNLMVKTKQ 405
+GI D+ +YKI + + +T++D K TG L+ + V + + E+++ + +
Sbjct: 221 LRVGITSRDVFEYKIIKNELIALTQRDCKLLTG---LKNNIV--DNEFSEDISFLEGLGK 275
Query: 406 KAEIQALSSFGFQYLSEVYLPLKL 429
K EI+ +S+ ++ + YL KL
Sbjct: 276 KMEIEIFTSYHTTFIVQ-YLEKKL 298
>gi|359416814|ref|ZP_09209083.1| DNA topoisomerase VI subunit A [Candidatus Haloredivivus sp. G17]
gi|358032828|gb|EHK01464.1| DNA topoisomerase VI subunit A [Candidatus Haloredivivus sp. G17]
Length = 165
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 70/138 (50%), Gaps = 8/138 (5%)
Query: 174 RDLFYT--------DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFS 225
R+++Y D F+DQ +S+ V+ D+ G R L++ A KG + G + +
Sbjct: 23 REVYYQLKHSVPGLDENTFEDQDESNNVVVDIETATGAIREDLHLFAEPKGRLFGPIKIN 82
Query: 226 DNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCII 285
D+GD ID MG G AIP +D + +++A FIL+VE A RL E+ F+ II
Sbjct: 83 DSGDTIDGMSMGSAGMAIPSIVDHLEFEENNADFILVVETSAMVNRLVEEDFHEEHNAII 142
Query: 286 VTAKGQPDVATRLFLRKM 303
+ GQP R + M
Sbjct: 143 IGTGGQPARGARRLINMM 160
>gi|320583531|gb|EFW97744.1| endonuclease Rec12 [Ogataea parapolymorpha DL-1]
Length = 494
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 88/169 (52%), Gaps = 13/169 (7%)
Query: 168 NIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDN 227
N V+KR ++Y DV LF+ Q + +DD+A G + +L V+AA+KG++ L +
Sbjct: 40 NFFVSKRQIYYRDVTLFKKQAVINQCIDDIASSFGVSTETLGVVAAQKGLIYANLQYYYK 99
Query: 228 GDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMF-------ILLVEKDAAYIRLAEDRFYNR 280
+ K G + P I + D F I++VEK++ + +L ++ ++
Sbjct: 100 DKFVKLEK--KEGTTLLPLIS-LESHHEDFRFVSPCPEEIIIVEKESVFSKLCKE--HDH 154
Query: 281 FPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKILSVY 328
I++TAKG PD T+ FL + + V+ALVDSD YGL IL Y
Sbjct: 155 GNKILITAKGFPDRLTKRFLYHLTQHYPEAKVVALVDSDVYGLMILKEY 203
>gi|300176283|emb|CBK23594.2| unnamed protein product [Blastocystis hominis]
Length = 211
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Query: 178 YTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIF--SDNGDMIDCTK 235
Y +++F Q + D + D +L R +L + A KG V GRL + + G D T
Sbjct: 7 YLILQIFSAQRECDDSIQDCIALLRVPRDALGISATSKGYVTGRLFYYPKEEGVWYDMTM 66
Query: 236 MGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVA 295
+I ++ +++SDA FIL+VEKD + RL EDRF++ PC+I+T +G PD+A
Sbjct: 67 EK--PHSITYDMINSLEVKSDAQFILVVEKDGIFKRLYEDRFFDILPCVIITGRGFPDIA 124
Query: 296 TRLF 299
TR F
Sbjct: 125 TRAF 128
>gi|254566367|ref|XP_002490294.1| Meiosis-specific protein that initiates meiotic recombination
[Komagataella pastoris GS115]
gi|238030090|emb|CAY68013.1| Meiosis-specific protein that initiates meiotic recombination
[Komagataella pastoris GS115]
Length = 367
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 96/211 (45%), Gaps = 31/211 (14%)
Query: 172 TKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVG--RLIFSDNGD 229
T+RDL+Y DV LF++Q DA+++ + LG S L V ++KG++ G +I+ +
Sbjct: 79 TRRDLYYKDVALFRNQATIDALIEQLCDSLGVKGSDLGVFPSQKGLIFGSISIIYKNLVG 138
Query: 230 MIDCTKMGMGGKA-----------------IPPNIDRVGDMQSDAMFILLVEKDAAYIRL 272
C ++ K+ IPP I V ++ DA+F L E
Sbjct: 139 KECCYQLSSSEKSQLTPNWFSNDVEILSVRIPPTIRCVIVLEKDAVFKRLCESS-----W 193
Query: 273 AEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGS 332
A+D++ I+VT KG PD TR FL M L V DSD YGL I + Y G+
Sbjct: 194 AQDQY------ILVTGKGYPDHLTRQFLDLMMKHTSLKVYGFFDSDIYGLLIANTYKYGT 247
Query: 333 KNMSYDSANLTTPDIKWLGIRPSDLDKYKIP 363
+ + L ++W G+ D + P
Sbjct: 248 -SQDLNKMLLEKNRLQWAGVEILDYTQGHQP 277
>gi|256073778|ref|XP_002573205.1| meiotic recombination protein spo11 [Schistosoma mansoni]
gi|353231619|emb|CCD78037.1| putative meiotic recombination protein spo11 [Schistosoma mansoni]
Length = 158
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 70/112 (62%), Gaps = 5/112 (4%)
Query: 251 GDMQSDAMFILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKMKMEL-K 308
G + FIL++EKD + +L ++FY +F PC++VTAKG PD+ TR FL ++ +
Sbjct: 45 GYTECLPQFILIIEKDTIFRKLLNEKFYEKFKPCLLVTAKGYPDLITRKFLAQINCKHPN 104
Query: 309 LPVLALVDSDPYGLKILSVYGCGSKN--MSYDSAN-LTTPDIKWLGIRPSDL 357
+P++ L D+DP+GL + Y G+ N M + N ++ P+++ G+ P+++
Sbjct: 105 IPIIGLFDADPHGLNVFCTYKYGTTNPMMQNEDGNPISIPNLQLCGLLPTEI 156
>gi|402467956|gb|EJW03175.1| hypothetical protein EDEG_02480 [Edhazardia aedis USNM 41457]
Length = 285
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 114/234 (48%), Gaps = 19/234 (8%)
Query: 155 VKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAE 214
+K ++ ++ +I KR+++Y VK+F++Q D ++D +A + S L + A+
Sbjct: 28 LKFYEILVEMHETSISKNKREIYYQSVKIFKNQRCIDRLVDRMAQKFCLSASDLLITASL 87
Query: 215 KGVVVGRLIFSDNG-DMI--DCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIR 271
KG++ G +IF G D++ + G I ++ ++ D++F L+ ++ A +
Sbjct: 88 KGLIHGNIIFKQGGADLVRPNLIPDQKGVTEIITPCSKIVVIEKDSLFSLICQQTAKHAI 147
Query: 272 LAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCG 331
L F V KG PD T FL+ +ME K+ + L D DP+G+ I VY G
Sbjct: 148 LQNVLF--------VCGKGYPDNNTMYFLK--RMEGKVEIFGLFDYDPFGMHIYCVYKYG 197
Query: 332 SKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEED 385
SK N ++ +G+ D+ KYKI E L + D K + L++ D
Sbjct: 198 SKK------NTGVLSMQRIGMCSDDVFKYKIDENELLKLNVHDYKKLESLVKFD 245
>gi|343473343|emb|CCD14743.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 495
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 33/214 (15%)
Query: 168 NIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDN 227
I T+RD++Y + F DQ + ++ + L R L V+ +G V G L F
Sbjct: 154 GIICTQRDVYYQLSRFFPDQGCVNRIIQQLVQQLAMPRQLLGVVPGTRGCVGGLLSFQG- 212
Query: 228 GDMIDCTKMGMGGKAIPP---------------NIDRVG--------DMQSDAMFILLVE 264
+D + G +P + VG ++ + +IL+VE
Sbjct: 213 ---VDLQRYSSEGFPLPTLQEELCVSWSGAQYRESEDVGSSNGFKGFELHNSVRYILVVE 269
Query: 265 KDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMK-----MELKLPVLALVDSDP 319
K + + RL E+R + R PC+++T++G P + L M+ + +P++ALVD +P
Sbjct: 270 KHSVFFRLMEERVFERVPCVLLTSQGFPTASALSLLMNMQEMISAVGANVPLVALVDFNP 329
Query: 320 YGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIR 353
GL IL Y + M ++S ++WLG+R
Sbjct: 330 SGLLILQQYKHNTGRM-HESRCSAAHSLRWLGLR 362
>gi|328350689|emb|CCA37089.1| Type II DNA topoisomerase VI subunit A [Komagataella pastoris CBS
7435]
Length = 382
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 31/200 (15%)
Query: 172 TKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVG--RLIFSDNGD 229
T+RDL+Y DV LF++Q DA+++ + LG S L V ++KG++ G +I+ +
Sbjct: 100 TRRDLYYKDVALFRNQATIDALIEQLCDSLGVKGSDLGVFPSQKGLIFGSISIIYKNLVG 159
Query: 230 MIDCTKMGMGGKA-----------------IPPNIDRVGDMQSDAMFILLVEKDAAYIRL 272
C ++ K+ IPP I V ++ DA+F L E
Sbjct: 160 KECCYQLSSSEKSQLTPNWFSNDVEILSVRIPPTIRCVIVLEKDAVFKRLCESS-----W 214
Query: 273 AEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGS 332
A+D++ I+VT KG PD TR FL M L V DSD YGL I + Y G+
Sbjct: 215 AQDQY------ILVTGKGYPDHLTRQFLDLMMKHTSLKVYGFFDSDIYGLLIANTYKYGT 268
Query: 333 KNMSYDSANLTTPDIKWLGI 352
+ + L ++W G+
Sbjct: 269 -SQDLNKMLLEKNRLQWAGV 287
>gi|389624895|ref|XP_003710101.1| meiosis-specific topoisomerase Spo11 [Magnaporthe oryzae 70-15]
gi|351649630|gb|EHA57489.1| meiosis-specific topoisomerase Spo11 [Magnaporthe oryzae 70-15]
Length = 466
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 87/156 (55%), Gaps = 6/156 (3%)
Query: 212 AAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQ-SDAMFILLVEKDAAYI 270
AA KG+++G + F NG C I + + +G + A ++L++EK+A +
Sbjct: 196 AAGKGLIIGPISFVLNGGARVCCDNVRTEGTIICSTEILGRFEFPSARWVLIIEKEATFR 255
Query: 271 RLAEDRFYNR---FPCIIVTAKGQPDVATRLFLRKMK-MELKLPVLALVDSDPYGLKILS 326
LA +FY P ++VT KG PD++TR + ++ ++P+ +LVD DP G++IL
Sbjct: 256 TLASSQFYRNSRAGPGVMVTGKGYPDLSTRNLVYCLREARPRIPIYSLVDYDPDGIRILC 315
Query: 327 VYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKI 362
Y S + ++ + + +I+W+GIR SD+ ++ +
Sbjct: 316 TYKYSSSALEHERQSAVS-NIQWIGIRLSDIKEHHL 350
>gi|67902544|ref|XP_681528.1| hypothetical protein AN8259.2 [Aspergillus nidulans FGSC A4]
gi|40739807|gb|EAA58997.1| hypothetical protein AN8259.2 [Aspergillus nidulans FGSC A4]
gi|259481048|tpe|CBF74226.1| TPA: spo11 homologue spoA (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 328
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 93/186 (50%), Gaps = 18/186 (9%)
Query: 245 PNIDRVGDMQ-SDAMFILLVEKDAAYIRLAEDRFYNRF---PCIIVTAKGQPDVATRLFL 300
P + + D+ SD +IL++EK+A + RL + F+N I++T KG PD+ATR F+
Sbjct: 123 PRVQDIADLDISDVKWILIIEKEAVFRRLVRNNFHNHTIVGKGILITGKGYPDLATRSFV 182
Query: 301 RKM--------KMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGI 352
R++ + P L D DP G+ I+S Y GS + ++ L P ++WLG+
Sbjct: 183 RRIFQSTFPRSTLTQAPPFYILADGDPDGIAIMSTYKYGSMAHTRENERLNLPCLQWLGL 242
Query: 353 RPSDL--DKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPG----WVEELNLMVKTKQK 406
R S++ ++ + +T +D + +L+ + G W EL M+ K
Sbjct: 243 RISEIIGGLESDADETLMSLTRRDRRKIGTMLKRSPIWAVDGPEAEWRVELQRMLILNVK 302
Query: 407 AEIQAL 412
AEI+ L
Sbjct: 303 AEIEIL 308
>gi|146420331|ref|XP_001486122.1| hypothetical protein PGUG_01793 [Meyerozyma guilliermondii ATCC
6260]
Length = 315
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 11/203 (5%)
Query: 149 RKSTITVKIL-SLIHQLCLRNIHVTKRDLFYTDVKLFQ-DQTQSDAVLDDVACILG-CTR 205
RK +K++ ++I L L +KRD++Y DV ++ Q D ++D +A LG C
Sbjct: 5 RKFAAYLKVIKAMIDNLQLARF-TSKRDIYYKDVSTYKKSQRYCDTIIDSIATSLGMCLE 63
Query: 206 SSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNID--RVGDMQSDAMFILLV 263
L + + KG++ G L + +C + + PN D R M + ++LV
Sbjct: 64 VDLRIFPSRKGLIYGSLKTHTGDQVFECNSTKV--PCLIPNFDSERSTVMSAAPKVVILV 121
Query: 264 EKDAAYIRLAED--RFYNRFPCIIVTAKGQPDVATRLFLRKM-KMELKLPVLALVDSDPY 320
EKDA + L + N +++T KG PD+ T+ F+ + K P L VDSD +
Sbjct: 122 EKDAVFSTLCDHLRTISNPKDLLVITGKGNPDILTKKFVELLSKSWPTTPFLGFVDSDVF 181
Query: 321 GLKILSVYGCGSKNMSYDSANLT 343
GL I Y GS+ + NLT
Sbjct: 182 GLSIFRAYKFGSQYHTKSLRNLT 204
>gi|190345758|gb|EDK37695.2| hypothetical protein PGUG_01793 [Meyerozyma guilliermondii ATCC
6260]
Length = 315
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 172 TKRDLFYTDVKLFQ-DQTQSDAVLDDVACILG-CTRSSLNVIAAEKGVVVGRLIFSDNGD 229
+KRD++Y DV ++ Q D ++D +A LG C L + + KG++ G L
Sbjct: 28 SKRDIYYKDVSTYKKSQRYCDTIIDSIATSLGMCLEVDLRIFPSRKGLIYGSLKTHTGDQ 87
Query: 230 MIDCTKMGMGGKAIPPNID--RVGDMQSDAMFILLVEKDAAYIRLAED--RFYNRFPCII 285
+ +C + + PN D R M + ++LVEKDA + L + N ++
Sbjct: 88 VFECNSTKV--PCLIPNFDSERSTVMSAAPKVVILVEKDAVFSTLCDHLRTISNPKDLLV 145
Query: 286 VTAKGQPDVATRLFLRKM-KMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLT 343
+T KG PD+ T+ F+ + K P L VDSD +GL I Y GS+ + NLT
Sbjct: 146 ITGKGNPDILTKKFVELLSKSWPTTPFLGFVDSDVFGLSIFRAYKFGSQYHTKSLRNLT 204
>gi|159112720|ref|XP_001706588.1| Spo11 Type II DNA topoisomerase VI subunit A [Giardia lamblia ATCC
50803]
gi|30578215|gb|AAP35104.1|AF485825_1 Spo11 [Giardia intestinalis]
gi|33667822|gb|AAQ24511.1| Spo11 [Giardia intestinalis]
gi|157434686|gb|EDO78914.1| Spo11 Type II DNA topoisomerase VI subunit A [Giardia lamblia ATCC
50803]
Length = 368
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 26/264 (9%)
Query: 171 VTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDM 230
V R L+YT L+ Q QS+ ++ + R ++ AA KG+++G
Sbjct: 81 VNIRSLYYTAPSLYGSQIQSNVLIAEFCFGYSIEREMMHYRAAAKGLLLGNCTMVTQVGT 140
Query: 231 IDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAE------DRFYNRFPCI 284
+ T + I P+ + + +DA F+L++EKD + L + DR F +
Sbjct: 141 V--TASSLVAVPISPHFFYLQQIHTDAQFVLVIEKDTVFEHLIDSYEAIKDRLGQSF--M 196
Query: 285 IVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSA---N 341
++T KG PD ATR + + ++P+ L D D +G+ IL Y GS + + S +
Sbjct: 197 VITGKGYPDAATRALVSFLD-SCRIPIFGLADGDAHGMNILCTYAYGSASATRKSVVPNH 255
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMV 401
P + +G+ S + + + + IK + D +K + L +
Sbjct: 256 YIAPSLVPIGVFNSHIQR-----------SSKAIKGSRHCDPAD-LKLYDILITRLTALG 303
Query: 402 KTKQKAEIQALSSFGFQYLSEVYL 425
+ + E+Q L++ G QY E L
Sbjct: 304 RLEWANEVQNLAALGMQYELETIL 327
>gi|365760425|gb|EHN02147.1| Spo11p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 448
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 107/215 (49%), Gaps = 18/215 (8%)
Query: 142 FASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACIL 201
F ++K +I + +L ++ + + T RD+FY++V+LFQ Q LD +
Sbjct: 150 FTHQFKLKKCSILLNLLKIVMEKLPLGKNTTVRDIFYSNVELFQRQANVVQWLDIIRFNF 209
Query: 202 GCT-RSSLNVIAAEKGVVVG--------RLIFSDNGDMIDCTKMGMGGKAIPPNI--DRV 250
+ R SLN+I A+KG++ +++ + + + G + P D +
Sbjct: 210 NLSPRKSLNIIPAQKGLIYSPFPIYVHDKIMTGKDEFQVQKQTVSHGKPCLIPFFQDDAI 269
Query: 251 GDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPC--IIVTAKGQPDVATRLFLRKMKME-- 306
++++ +++VEK+A + +L + Y+R +++T KG PD TRLFL+K++ +
Sbjct: 270 IELETSNCNLVIVEKEAVFTKLVSN--YHRLNANTVLITGKGFPDFLTRLFLKKLEQDCS 327
Query: 307 -LKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSA 340
L D+DPYG+ I Y S N +Y+ A
Sbjct: 328 SLISSCSIFTDADPYGISIALNYINSSANAAYNCA 362
>gi|343425344|emb|CBQ68880.1| related to meiotic recombination protein SPO11 [Sporisorium
reilianum SRZ2]
Length = 358
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 112/253 (44%), Gaps = 39/253 (15%)
Query: 181 VKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGG 240
+ LF Q SD + VA +LGC R++LN++A+ +G+V G L
Sbjct: 98 MHLFATQQASDRTIAHVATLLGCDRAALNIVASPRGLVSGPLTLHPPFPSTPIACQPGHA 157
Query: 241 KAIPPNID---RVGDMQSDAMFILLVEKDAAYIRLAE----------DRFYNRFPCIIVT 287
IPP ID RV DM + +L+VEK+A + L + +R + ++VT
Sbjct: 158 TLIPPEIDLHWRV-DMWCERPLVLVVEKEAVFTHLLQLQLCTPATRGERAVDWGRVVMVT 216
Query: 288 AKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDI 347
AKG D ATR L+ + + + L D+DPYG+ I + + SA+ +
Sbjct: 217 AKGYADQATRALLQLLGVR----AVGLFDADPYGVDI---------HRQFCSAH----SV 259
Query: 348 KWLGIRPSDLDKYKIP----EQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVE-ELNLMVK 402
+W+G+ DL + P +P+ + T LL + V L M+
Sbjct: 260 EWIGV---DLSDFAPPLAGQNSALVPLRNDERATAVRLLRGLGTSHDDERVRARLTDMLL 316
Query: 403 TKQKAEIQALSSF 415
T KAEI+A F
Sbjct: 317 TGYKAEIEAAYDF 329
>gi|443898367|dbj|GAC75702.1| catalytic subunit of the meiotic double strand break transesterase
[Pseudozyma antarctica T-34]
Length = 347
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 140/296 (47%), Gaps = 40/296 (13%)
Query: 86 LSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVP-ELDRIVLKDKT--TLRPF 142
L+ + + + L+ Q+A + A N P R S+ ++ P E D + K + P
Sbjct: 13 LARIDALVADLLHQLAGQLDAVN----PAPLRLSTTRVAEPSEHDDSAAQRKVRPVMFPT 68
Query: 143 ASLSTVRKSTITVKILSLIHQLCLRNIHVTKR---DLFYTDVKLFQDQTQSDAVLDDVAC 199
+ S VR+ V++L ++ L TKR D++Y+ ++F Q SD V++ +A
Sbjct: 69 RASSGVRRFAQYVRVLEVVQANLLAGRATTKRAHRDVYYSCSEVFDTQRASDLVVERLAQ 128
Query: 200 ILGCTRSSLNVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQ---- 254
+LGCTR +L V+A+ +G+V G + + S +G + + + IP ++ +
Sbjct: 129 LLGCTRGALGVVASTRGLVSGSMHLRSPDGRAVHSVRGET--QRIPADMSAAWSVHLTCP 186
Query: 255 --SDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKME---LKL 309
+L+VEK + RL + + + I+VTA G D AT +R + +
Sbjct: 187 EDCRGHVVLVVEKACVFQRLLDLQLGSDL--IVVTACGYADAATLELVRLLAAAPCPAGV 244
Query: 310 PVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQ 365
V L D DPYG+ I +M Y +A TP I+WLG+ D D++ + Q
Sbjct: 245 RVCGLFDGDPYGVDI---------HMHYRAA---TP-IQWLGV---DADEFDLAPQ 284
>gi|308160882|gb|EFO63349.1| Spo11 Type II DNA topoisomerase VI subunit A [Giardia lamblia P15]
Length = 368
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 120/270 (44%), Gaps = 38/270 (14%)
Query: 171 VTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDM 230
+ R L+YT L+ QTQS+ ++ + G R ++ AA KG+++G N M
Sbjct: 81 INIRSLYYTAPSLYGSQTQSNVLIAEFCFGYGIEREMMHYRAAAKGLLLG------NCTM 134
Query: 231 IDCTKMGMGGKA------IPPNIDRVGDMQSDAMFILLVEKDAAYIRLAE------DRFY 278
I T++G + I P+ + + +DA F+L++EKD + L + D+
Sbjct: 135 I--TQIGTITTSSLVPVPISPHFFYLQQIHTDAQFVLVIEKDTIFEHLVDSYKAIRDKLG 192
Query: 279 NRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYD 338
F +++T KG PD ATR + + K+ + L D D +G+ IL Y GS + +
Sbjct: 193 QSF--MVITGKGYPDAATRALVSFLD-SCKILIFGLADGDAHGMNILCTYAYGSASATRK 249
Query: 339 SA---NLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVE 395
S + P + +G+ S + + + IK + D VK +
Sbjct: 250 SVVPNHYIAPSLVPIGVFSSHIQR-----------SSGAIKGSRHCDPTD-VKLYDILIT 297
Query: 396 ELNLMVKTKQKAEIQALSSFGFQYLSEVYL 425
L + + + E+Q L++ G QY E L
Sbjct: 298 RLTALGRLEWANEVQNLATLGMQYELETIL 327
>gi|399216597|emb|CCF73284.1| unnamed protein product [Babesia microti strain RI]
Length = 241
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 116/266 (43%), Gaps = 29/266 (10%)
Query: 173 KRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMID 232
+R + Y +F Q + L + ++ +S LN+ + +G+ + + N D
Sbjct: 2 ERSIIYKYKNIFTSSNQVNKYLKRICTLINVCKSDLNISNSNRGISLICSLSIKNNDFT- 60
Query: 233 CTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQP 292
NI + M DA +IL+VEK + + L +FYN PCI++T G P
Sbjct: 61 -----------SKNISK---MSIDANYILVVEKQSIFHYLTSIKFYNILPCILITGSGFP 106
Query: 293 DVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGI 352
TR L K+ KL L L D DPYG+ I Y + D N+ K+LG+
Sbjct: 107 SFDTRNILNKIITNTKLAALYLGDYDPYGMLIYLTYI-----EALDCDNICC--FKYLGV 159
Query: 353 RPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQ---KAEI 409
SDL + ++ +T D K D+L + + ++VK K+ K EI
Sbjct: 160 TNSDLK--SVESANKVKLTNND-KRMIDMLIVRLGDRIATGNKLKQMLVKMKESSFKVEI 216
Query: 410 QALSSFGFQYLSEVYLPLKLQQKDWL 435
+AL S +L E Y+ K + D +
Sbjct: 217 EALQSICDDFL-ENYITKKALRNDTI 241
>gi|300705745|ref|XP_002995228.1| hypothetical protein NCER_101961 [Nosema ceranae BRL01]
gi|263511524|sp|C4VB43.1|SPO11_NOSCE RecName: Full=Probable meiosis-specific protein SPO11 homolog
gi|239604174|gb|EEQ81557.1| hypothetical protein NCER_101961 [Nosema ceranae BRL01]
Length = 271
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 113/247 (45%), Gaps = 34/247 (13%)
Query: 172 TKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMI 231
KR+++Y V +F+ Q+ D ++ D L CT+S L + KGV G + F N ++
Sbjct: 47 NKREIYYNSVSIFKKQSIVDMLIKDTCNKLKCTQSDLLISTTLKGVFYGNITFYKNNKLV 106
Query: 232 DCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQ 291
+ + G ++ P+++++ ++ L++EKD + + + N + + KG
Sbjct: 107 H---VNLKGTSLIPDMNQIDRIEYTQKKCLIIEKDTIFSKTVREYISN--DILFICGKGY 161
Query: 292 PDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLG 351
P T L + K L + + D DPYGL+I + Y P IK +G
Sbjct: 162 PCRNTLLLVNK----LNIRKYGIFDFDPYGLEICTKY----------------PSIKKIG 201
Query: 352 IRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQA 411
I D++ I +Q + + + DI+ LL K + EL M+K K EI+
Sbjct: 202 IDIKDIN--LIDKQHFMILNKYDIRKINTLL------KQKVYEIELFYMLKNNIKIEIEG 253
Query: 412 L-SSFGF 417
L S+ GF
Sbjct: 254 LFSAKGF 260
>gi|68075775|ref|XP_679807.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56500635|emb|CAH98047.1| conserved hypothetical protein [Plasmodium berghei]
Length = 268
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 89/167 (53%), Gaps = 9/167 (5%)
Query: 168 NIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDN 227
NI+ T R +FYT+ +LF Q S+ + + I+ R LN+ + KG++ G L+ +
Sbjct: 56 NIYTTLRQIFYTNPQLFISQNISNRTIGKLTQIIKKPREILNIYNSPKGIIRGNLLLKER 115
Query: 228 G--DMIDCTKM-GMGGKAIPPNIDRVGDMQ--SDAMFILLVEKDAAYIRLAEDRFYNRF- 281
D IDC + G I P V D++ + ++L++EK+ + +L + F ++
Sbjct: 116 NLSDWIDCMSIFETRGHLISPF--GVLDLKIATTVKYVLIIEKETVFFKLLQSNFIFKYG 173
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELK-LPVLALVDSDPYGLKILSV 327
P I++TAKG PD+ TR + +++ + K L L D D Y + +S+
Sbjct: 174 PLILITAKGFPDINTRQLIHEIQKKNKTLKFFCLTDYDAYDMDDISI 220
>gi|159464146|ref|XP_001690303.1| topoisomerase [Chlamydomonas reinhardtii]
gi|158284291|gb|EDP10041.1| topoisomerase [Chlamydomonas reinhardtii]
Length = 1873
Score = 77.0 bits (188), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/132 (35%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Query: 282 PCIIVTAKGQPDVATRLFLRKMKMELK-LPVLALVDSDPYGLKILSVYGCGSKNMSYDSA 340
PC++VTAKG PD+ATR F ++ + + LVD +P G+ IL+ Y GS M +
Sbjct: 955 PCVLVTAKGVPDIATRAFAARLAATFPGMQPVGLVDFNPAGVVILATYKYGSDRMGPEGR 1014
Query: 341 NLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLM 400
P ++WLG+R L RL T +D + L E PGWV EL+ M
Sbjct: 1015 AHPLPRLRWLGVRGRHLAGVGEAHLQRL--TARDTALIRS-LRERLSAAEPGWVAELDAM 1071
Query: 401 VKTKQKAEIQAL 412
+ K +I+AL
Sbjct: 1072 EQAGYKGDIEAL 1083
>gi|303389050|ref|XP_003072758.1| DNA topoisomerase VI subunit A [Encephalitozoon intestinalis ATCC
50506]
gi|303301900|gb|ADM11398.1| DNA topoisomerase VI subunit A [Encephalitozoon intestinalis ATCC
50506]
Length = 296
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 126/270 (46%), Gaps = 15/270 (5%)
Query: 149 RKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSL 208
R + +++ +I ++ I +R++FY V +F+ QT ++ +A L ++S L
Sbjct: 25 RTLVMRIRLHEIIMEMQELGITRNEREIFYMAVNIFKSQTAVKRLISTIASELRVSKSDL 84
Query: 209 NVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAA 268
+ KG +G+L F D+I+ + + I P+++ + ++ +L+VEKD
Sbjct: 85 RIRNTLKGTFIGKLAFVKGPDIIEMSSCRNNPQLI-PDMEGIVEVFCSYERVLVVEKDTI 143
Query: 269 YIRLAEDRFYNRF--PCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILS 326
R+A R+ ++V +G P T L L+ +E K + L D DP+G+ I
Sbjct: 144 LQRIASGIERERYLEGVLLVCGRGYPCKNTMLLLK--MIEHKTAIGGLFDFDPFGIHIFC 201
Query: 327 VYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDF 386
VY GS+ ++ I +G+ D+ +I + + + D+K L+E +
Sbjct: 202 VYKYGSR----EAPETRVETIVRIGVCAEDILDKRIHQDGLAGLNKYDLKMVDRLMEFEC 257
Query: 387 VKKNPGWVEELNLMVKTKQKAEIQALSSFG 416
+P L+ KT +K E++A S G
Sbjct: 258 FTNDP------LLLKKTGKKVEMEAFLSKG 281
>gi|326468722|gb|EGD92731.1| hypothetical protein TESG_00300 [Trichophyton tonsurans CBS 112818]
Length = 303
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 119/263 (45%), Gaps = 53/263 (20%)
Query: 172 TKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRL-IFSDNGDM 230
+KRD+FY D F Q D +DD+A L R++L+V AA KG G I NG
Sbjct: 53 SKRDIFYQDPVYFGSQRLVDRYIDDIAFTLDVDRAALHVAAAAKGATGGNFSITLKNGSS 112
Query: 231 ID---CTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPC---I 284
I CT +A + RL ++N I
Sbjct: 113 IQVGACT-------------------------------EAVFHRLITSGYHNASAAGSGI 141
Query: 285 IVTAKGQPDVATRLFLRKMK---------MELKLPVLALVDSDPYGLKILSVYGCGSKNM 335
++T KG PD+++R FLR + + P+ LVDSDP G+ I+S Y GS
Sbjct: 142 LLTGKGYPDLSSREFLRLLSRHEVCNSKMISSPPPIFILVDSDPDGMAIMSTYKYGSMAQ 201
Query: 336 SYDSANLTTPDIKWLGIRPSDL--DKYKIPEQCRLPMTEQDIKTGKDLLEED--FVKKN- 390
+ +A+L P I+W+G++ S++ +PM+++D K + +L+ + F +
Sbjct: 202 VHRNADLNMPSIQWVGLQASEMMSATNHTDMSSLVPMSQRDRKKAEAMLKRNPSFAEDGP 261
Query: 391 -PGWVEELNLMVKTKQKAEIQAL 412
P W +EL ++ KAE++ L
Sbjct: 262 EPTWRKELQSLLVMNLKAELEIL 284
>gi|401838787|gb|EJT42241.1| SPO11-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 397
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 19/216 (8%)
Query: 142 FASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACIL 201
F ++K +I + +L ++ + + T RD+FY++V+LFQ Q LD +
Sbjct: 98 FTHRFRLKKCSILLNLLKIVMEKLPLGKNTTVRDIFYSNVELFQRQANVVQWLDIIRFNF 157
Query: 202 GCT-RSSLNVIAAEKGVVVG--------RLIFSDNGDMIDCTKMGMGGKAIPPNI--DRV 250
+ R SLN+I A+KG++ +++ + I + G + P D +
Sbjct: 158 NLSPRKSLNIIPAQKGLIYSPFPIYVHDKIMTGKDEFQIQKQTVSHGKPCLIPFFQDDAI 217
Query: 251 GDMQSDA-MFILLVEKDAAYIRLAEDRFYNRFPC--IIVTAKGQPDVATRLFLRKMKME- 306
++++ + +++VEK+A + +L + Y+R +++T KG PD TRLFL+K++ +
Sbjct: 218 IELETTSNCNLVIVEKEAVFTKLVSN--YHRLNANTVLITGKGFPDFLTRLFLKKLEQDC 275
Query: 307 --LKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSA 340
L D+DPYG+ I Y S N +Y+ A
Sbjct: 276 SSLISSCSIFTDADPYGISIALNYINSSANAAYNCA 311
>gi|254584991|ref|XP_002498063.1| ZYRO0G01364p [Zygosaccharomyces rouxii]
gi|238940957|emb|CAR29130.1| ZYRO0G01364p [Zygosaccharomyces rouxii]
Length = 371
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 139/297 (46%), Gaps = 42/297 (14%)
Query: 142 FASLSTVRKSTITVKILSLIH--QLCLRNIHV-TKRDLFYTDVKLFQDQTQSDAVLDDVA 198
++S++ + S +L+L+ Q CL + V T RDLFY++V+L+ Q D ++ +A
Sbjct: 82 YSSVAAHQNSNRIAIMLNLLQTIQECLTSSTVKTNRDLFYSNVELYGKQVTVDRWINTIA 141
Query: 199 CILGCT--RSSLNVIAAEKGVVVG----RLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGD 252
L T R +LNVI A+KG+V R++ + + I+ + ++ ++
Sbjct: 142 QSLELTNARDNLNVIPAQKGLVFTTQEIRILTKGSEERINPYHSSLIPHMDQNSLCQIVP 201
Query: 253 MQSDAMFILLVEKDAAYIRLAEDRFYNRFP-----CIIVTAKGQPDVATRLFLRKMKMEL 307
++ +L++EK+A Y +L D Y+ P CIIVT KG PD TRLFL K L
Sbjct: 202 GRNATTRLLVLEKEAVYNQLVNDVQYS--PSYYDDCIIVTGKGYPDFLTRLFLHK----L 255
Query: 308 KLPVLAL------VDSDPYGLKILSVYGCGSKNMSYDSANLTTP----DIKWLGIRPSDL 357
++ A+ D+DPYG+ I Y N+ P + G+ L
Sbjct: 256 QVSTTAIERWEIYTDADPYGVDIAMKY----------VQNVKEPCRCNKLVHRGVFLFQL 305
Query: 358 DKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGW--VEELNLMVKTKQKAEIQAL 412
+ + LPMT++D +L+ P V+EL + ++KAE+ +
Sbjct: 306 MSNQRQQVQYLPMTQRDTAVATRILQRVTESNLPNMTTVQELQRQIFLQKKAEMNVM 362
>gi|302808744|ref|XP_002986066.1| hypothetical protein SELMODRAFT_424976 [Selaginella moellendorffii]
gi|300146214|gb|EFJ12885.1| hypothetical protein SELMODRAFT_424976 [Selaginella moellendorffii]
Length = 339
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 31/203 (15%)
Query: 86 LSAVQSTIETLILQIA-RSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLRPFAS 144
L+ +Q I+ L+ I RS+L + F++ SS + +R ++K +L+
Sbjct: 28 LARIQDFIKELLSHIKDRSMLVISLDKFRMRRLHSSEDTNLGIFERCEAQEKLSLQ---- 83
Query: 145 LSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT 204
++ R+ +++L ++ L + H +KRDL+YTD DQ + L D++ L CT
Sbjct: 84 -TSGRRILAMLRVLQIVQSLLQQGKHASKRDLYYTD----PDQATVNQALIDISVRLKCT 138
Query: 205 RSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVE 264
RSSL+V++ KG+++G L F D IDC+ G IP +
Sbjct: 139 RSSLHVVSVGKGLIMGSLRFKDADRTIDCSVCKSRGYPIPTD------------------ 180
Query: 265 KDAAYIRLAEDRFYNRFPCIIVT 287
A +RLA D F + CI++T
Sbjct: 181 ---AKMRLANDGFCRKNNCIVLT 200
>gi|164426175|ref|XP_961027.2| hypothetical protein NCU01120 [Neurospora crassa OR74A]
gi|157071228|gb|EAA31791.2| hypothetical protein NCU01120 [Neurospora crassa OR74A]
Length = 404
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 119/283 (42%), Gaps = 73/283 (25%)
Query: 82 TDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSN-QLYVPELDRIVLKDKTTLR 140
+D +L+ +++ ET++ I+ G +P R S+N Q++ P +D +
Sbjct: 56 SDNALTKIEALFETIVDAIS------VGSPITIPYRRSTNAQVFDPTASASNPRDGRHMD 109
Query: 141 ----PFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDD 196
P + +R+ +I+ + H+ L VTKR Q+ D ++D+
Sbjct: 110 SVRFPGRNPQELRRFEALFRIIEISHEALLSGTLVTKRS-----------QSVVDDMVDN 158
Query: 197 VACILGCTRSSLNVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS 255
+A LG R+ LN++A KG+V G++ + G IDC + G
Sbjct: 159 LAFTLGVGRNDLNIVATAKGLVAGQVELIMRGGSKIDCAESSDSG--------------- 203
Query: 256 DAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMK-MELKLPVLAL 314
KG PD+ATR FL + + +L + AL
Sbjct: 204 ---------------------------------KGYPDLATRKFLAAIHSVRPRLLMFAL 230
Query: 315 VDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL 357
VD DP+G+ +L Y GS+ + ++ ++WLGIR SD+
Sbjct: 231 VDFDPHGISVLRTYQYGSQRLDHEERTKVF-GLRWLGIRSSDV 272
>gi|431894522|gb|ELK04322.1| mRNA export factor [Pteropus alecto]
Length = 658
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 72/116 (62%), Gaps = 7/116 (6%)
Query: 174 RDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIF-SDNGDMID 232
RD++YTD +LF +Q D ++D+++C+L R L+V++ KG++ G L + ++G ++
Sbjct: 44 RDIYYTDNQLFGNQAVVDNIVDNISCMLKVPRRCLHVLSTSKGLIAGNLRYMEEDGTKVN 103
Query: 233 CTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF-PCIIVT 287
C+ + +I + +DA F+L+VEKDA + RL +D F N+ PCI+VT
Sbjct: 104 CSCTTV---SIINTFTYY--LITDAKFLLIVEKDATFQRLLDDNFCNKTSPCIMVT 154
>gi|156103149|ref|XP_001617267.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148806141|gb|EDL47540.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 312
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 93/194 (47%), Gaps = 18/194 (9%)
Query: 128 LDRIVLKDKTTLRPFASLSTVRKSTITV---KILSLIHQLCL---------RNIHVTKRD 175
+D L +K TL SL +K + KIL + C+ N+H T R
Sbjct: 5 VDVTTLLEKYTLNFLTSLLENKKQKKVLSKGKILEMARLFCIIEIVSKNLKDNMHSTLRQ 64
Query: 176 LFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGD--MIDC 233
+FYT+ +LF Q S+ + + I+ R LN+ + KG++ G + + +DC
Sbjct: 65 IFYTNPQLFISQKVSNVTIGKLTKIVKIPRELLNIYNSPKGIIRGNVFLREKNSSPWVDC 124
Query: 234 TKM--GMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKG 290
+ G P + + + D ++L+VEK+ + RL + F + + PCI++TA+G
Sbjct: 125 MSIFETRGHLICPFGVSDI-KISPDVKYVLIVEKETIFFRLLQSDFISNYGPCIMITARG 183
Query: 291 QPDVATRLFLRKMK 304
PD+ TR L +++
Sbjct: 184 FPDLNTRQLLYEIR 197
>gi|413933052|gb|AFW67603.1| hypothetical protein ZEAMMB73_214766 [Zea mays]
Length = 232
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 69/126 (54%)
Query: 152 TITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
+ +++L ++ QL +N H +KRD++Y +F + D ++D+ + C+R +LNV+
Sbjct: 99 NVLLRVLFVVQQLLQQNKHCSKRDIYYMYPSIFVEVAVVDRAINDICILFKCSRHNLNVV 158
Query: 212 AAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIR 271
KG+V+G + F + + C +IP +I+ + D+ S A +IL+VEK+
Sbjct: 159 PVVKGLVMGWIRFMEGEKKVYCITSVNAAFSIPVDIEAIKDVVSVAHYILVVEKETGLFF 218
Query: 272 LAEDRF 277
A + F
Sbjct: 219 FAFNNF 224
>gi|343957979|emb|CCC41972.1| meiosis-specific sporulation protein SPO11, partial [Rhizophagus
irregularis DAOM 181602]
Length = 115
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%)
Query: 142 FASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACIL 201
F S + I ++IL + H+L ++N+ TKRD++Y DVKLF + D V+D++AC
Sbjct: 33 FLSTKNPKTFVIMIRILDICHELLIQNVTATKRDIYYKDVKLFGNSQTVDLVIDELACFF 92
Query: 202 GCTRSSLNVIAAEKGVVVGRL 222
RS LNVIA+ KG+V G L
Sbjct: 93 QIPRSCLNVIASAKGLVAGSL 113
>gi|218185894|gb|EEC68321.1| hypothetical protein OsI_36417 [Oryza sativa Indica Group]
Length = 213
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 6/145 (4%)
Query: 215 KGVVVGRLIFSDNGD-MIDCTKMGMGGKAIPPNIDRVGD--MQSDAMFILLVEKDAAYIR 271
+G ++G ++F D MID + + IP +I V ++ F+L+VEK + +
Sbjct: 3 RGSIIGPVLFKVGEDVMIDAS---LRAVQIPHDIHLVDHIKLKKPVSFVLVVEKLSIFNM 59
Query: 272 LAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCG 331
L F+ CII+T G+PD+ATR + K+ L + V L D D GL+I Y G
Sbjct: 60 LVNLNFHVTHNCIIITGCGKPDMATRGAVFKLSYCLPVKVYILADLDLDGLQIYFTYKLG 119
Query: 332 SKNMSYDSANLTTPDIKWLGIRPSD 356
SK ++++ + + D+ WLG RP D
Sbjct: 120 SKVRAFENLCVASRDLIWLGARPED 144
>gi|440295525|gb|ELP88438.1| meiotic recombination protein SPO11, putative [Entamoeba invadens
IP1]
Length = 340
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 13/199 (6%)
Query: 135 DKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVL 194
DK F S++R+ +L IH+ I +TKR ++Y + LF Q D ++
Sbjct: 52 DKVESPLFKKRSSLREIAQVCVVLKAIHEAVQSGISITKRHIYYLEKDLFTCQNTVDRII 111
Query: 195 DDVA-CILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDM 253
++ + + + NVIAA KG G + F N + P + + +
Sbjct: 112 KRLSKYVFKAPKEAFNVIAAPKGFFNGNVGFGKN--------QSSATTRLIPTVPFLANN 163
Query: 254 QSDAMF--ILLVEKDAAYIRLAEDRFYN--RFPCIIVTAKGQPDVATRLFLRKMKMELKL 309
++ IL+VEK + ++ ++ + ++VT G PD AT +F+ + K
Sbjct: 164 SANTHIAGILVVEKYTVFEKIVSSHWFASMKGEILVVTGCGFPDTATCVFVSTISTTTKC 223
Query: 310 PVLALVDSDPYGLKILSVY 328
PV LVD DP GL I + Y
Sbjct: 224 PVYCLVDFDPCGLDIFASY 242
>gi|83771493|dbj|BAE61625.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 384
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 133/306 (43%), Gaps = 38/306 (12%)
Query: 141 PFASLSTVRKSTITVKILSL--IHQLCLRNIHVTKRDLFY-------------TDVKLFQ 185
P A+ K +I + L+L +H L L I V R L +D F
Sbjct: 66 PGANTFEAWKFSIHIDSLTLPRVHILILITIAVVFRVLAVVADAIGTGVVVSKSDPACFG 125
Query: 186 DQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIP 244
Q D ++DD+A +G RS+LNV AA KG+V G + + +G+ +D ++ +P
Sbjct: 126 TQRIVDTIVDDLAYTIGVDRSALNVEAAAKGLVAGYCSLLTKSGETMDV-QLPAKDCLVP 184
Query: 245 PNIDRVGDMQSDAMFILLVEKDA---AYIRLAEDRFYNR------FPCIIVTAKGQPDVA 295
+ D SDA ++L++EK+ Y + E +R II+ + Q
Sbjct: 185 SSQDDRELNISDASWVLIIEKEVQPLPYDLITETHLVHRPSTADSQEVIIILERPQEKGF 244
Query: 296 TRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPS 355
+ L + ++ LVD+DP G+ I+S+Y GS + + L P + WLG+R S
Sbjct: 245 SSLSDKALRF------YGLVDNDPDGMAIMSIYKYGSMAHTNQNGRLNIPCLWWLGLRTS 298
Query: 356 DLDKYKIPEQCRL--PMTEQDIKTGKDLLEEDFVKKNPG----WVEELNLMVKTKQKAEI 409
D+ R +T +D +L + V G W EL M+ KAEI
Sbjct: 299 DVVSGAPSNDDRALNRLTVRDRTKIVTMLSNNPVWAAEGPELEWRAELQQMLMLNLKAEI 358
Query: 410 QALSSF 415
+ L +
Sbjct: 359 EILYDW 364
>gi|50285739|ref|XP_445298.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524602|emb|CAG58204.1| unnamed protein product [Candida glabrata]
Length = 372
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 114/246 (46%), Gaps = 21/246 (8%)
Query: 148 VRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT-RS 206
++K +IT +L I + + T RD+FY +V+LF+ Q +D + LG T R
Sbjct: 93 IQKLSITFTLLKEIQRNIEKCTAFTSRDIFYRNVELFKSQRLVVDTVDHIQKALGLTIRE 152
Query: 207 SLNVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIP-----PNIDRVGDMQSDAMFI 260
LN+ A +KG++ + I ++ D + IP I D + +
Sbjct: 153 DLNITATQKGLIFTAVDIIINSSDTKKIKITKGKSQLIPQFDSNAFIMVCKDDPQMILKV 212
Query: 261 LLVEKDAAYIRLAEDRFYNRFPC---IIVTAKGQPDVATRLFLRKMKM-ELKLPVLALVD 316
L++EKDA Y + + P I+VT KG PD+ TR FL +++ L + L D
Sbjct: 213 LVIEKDAVYNTIIQK------PTEGYIVVTGKGYPDMLTRKFLHRLEQCNSNLQFVILTD 266
Query: 317 SDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIK 376
DP+G+ I Y + + Y A+L I L + +D + LP++ +DIK
Sbjct: 267 PDPHGINIAMKYQGFTTDSIYPCASLIRKGISILEL----IDGHSSTIAQVLPLSTRDIK 322
Query: 377 TGKDLL 382
+++L
Sbjct: 323 LAQNIL 328
>gi|429328614|gb|AFZ80374.1| hypothetical protein BEWA_032270 [Babesia equi]
Length = 223
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 16/189 (8%)
Query: 257 AMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVD 316
A +L+VEK ++ L R + + P I++T G P TR + + M + + L D
Sbjct: 39 ANHVLVVEKYTVFMSLCHSRIWKKLPIILITGCGFPSNNTRKLVEDLSMNSDIEICYLGD 98
Query: 317 SDPYGLKILSVYGCGSKNMSYDSANLTTPDI----------KWLGIRPSDLDKYKIPEQC 366
DP+G I Y GS + +S PD+ KW+GIR SD+++Y I +
Sbjct: 99 YDPHGFLIFLSYAKGSVSTRINSL---IPDVHINRRKGNRYKWIGIRASDVEEYGIKKV- 154
Query: 367 RLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLP 426
+ +T+++++ ++L+ + V +N E+ +T QK EI+AL + Y+
Sbjct: 155 -VDLTKREMRILENLISDPEVAENTLLRHEIEQQ-RTVQKIEIEALEESTSTGVLFEYVI 212
Query: 427 LKLQQKDWL 435
K+ ++W+
Sbjct: 213 RKILSREWI 221
>gi|448116869|ref|XP_004203119.1| Piso0_000719 [Millerozyma farinosa CBS 7064]
gi|359383987|emb|CCE78691.1| Piso0_000719 [Millerozyma farinosa CBS 7064]
Length = 364
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 91/187 (48%), Gaps = 17/187 (9%)
Query: 149 RKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQ-DQTQSDAVLDDVACILGCT-RS 206
RK +KIL ++ L + TKRD++Y DV LFQ QT + +LD V+ L +
Sbjct: 78 RKFATLIKILKVLITNLLTHKQTTKRDIYYQDVTLFQKSQTYVNEILDCVSYSLHLSMED 137
Query: 207 SLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQ----SDAMFILL 262
L + A++KG++ R+ ++ ++ P I R D++ DA+ IL
Sbjct: 138 DLGIFASQKGMLFSRIPLAEGNTVLTFDT--------PTLIPRFHDIKLLGCPDAVIIL- 188
Query: 263 VEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELK-LPVLALVDSDPYG 321
EK+A + + +++T KG PD TR F+ + E K L L VD+D YG
Sbjct: 189 -EKEAIFKSFCQFVKEKNLNLLVITGKGFPDRLTRNFVAYLSKEYKNLAFLGFVDADVYG 247
Query: 322 LKILSVY 328
+ IL Y
Sbjct: 248 INILKTY 254
>gi|358382356|gb|EHK20028.1| hypothetical protein TRIVIDRAFT_48006 [Trichoderma virens Gv29-8]
Length = 403
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 92/214 (42%), Gaps = 16/214 (7%)
Query: 157 ILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKG 216
IL L H + TKR +FY LF Q D ++D++A L R LN++A+ KG
Sbjct: 86 ILQLAHDALVSGTVSTKRHIFYQHQGLFVRQRTVDELVDNLASALNVQRDDLNIVASSKG 145
Query: 217 VVVGRLIFSDNGDMIDCTKMGMGGKAIPPN------IDRVGDMQSDAMFILLVEKDAAYI 270
V +G L + + +G + N + G +Q A D + I
Sbjct: 146 VFLGPLSICLQDNTVIGPAVGDAVRIFTRNYYLSLFFLQPGPLQPLAA----KPSDGSCI 201
Query: 271 RLAEDRFY--NRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKILSV 327
F N T G PD+ T F++ ++ ++P+ L D DP GL IL
Sbjct: 202 SFFSVLFVLANVLRWSRTTHNGYPDMLTCSFIQLIRFNCPQIPIFVLADYDPDGLNILRH 261
Query: 328 YGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYK 361
Y S+ + S T P I+WLGI+ DL + K
Sbjct: 262 YRLKSE---FVSQEFTAPAIRWLGIKSQDLLERK 292
>gi|396081258|gb|AFN82876.1| DNA topoisomerase VI subunit A [Encephalitozoon romaleae SJ-2008]
Length = 301
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 128/289 (44%), Gaps = 32/289 (11%)
Query: 137 TTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDD 196
+TL+ L + R + +++ +I ++ I +R++FY DV +F+ QT ++
Sbjct: 15 STLKLLTDLKS-RTLVVRIRLHEIIIEMQESGISRNEREIFYMDVNVFRTQTTVKRMISS 73
Query: 197 VACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIP-------PNIDR 249
+A L ++ L V KG +GRL F I C + P P++ +
Sbjct: 74 IASELRVSKYELGVRNTLKGTFIGRLTF------IKCGSLSAMEICSPENTPQLIPDMSK 127
Query: 250 VGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPC----IIVTAKGQPDVATRLFLRKMKM 305
V ++ D +L+VEKD R+A + R C ++V +G P T L L+ +
Sbjct: 128 VKEVLCDYKKVLVVEKDTILQRIASE--IGRERCLEGVLLVCGRGYPCKNTMLLLK--MI 183
Query: 306 ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQ 365
E K + D DP+G+ I +Y GS+ M D+ I +G+ D + E
Sbjct: 184 ENKTTISGFFDFDPFGIHIFCIYKHGSR-MDPDTR---VETITRIGVCVEDALERNKWEG 239
Query: 366 CRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSS 414
L +++ D+K L+ K +L + KT +K E++A S
Sbjct: 240 GFLELSDHDLKMIDKLM------KFKDLASDLLFLKKTNKKIEMEAFFS 282
>gi|449470686|ref|XP_004153047.1| PREDICTED: meiotic recombination protein SPO11-1-like, partial
[Cucumis sativus]
Length = 79
Score = 72.0 bits (175), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/79 (44%), Positives = 50/79 (63%)
Query: 219 VGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFY 278
+G L FS+ G DC K IP ++ V D+ S A +IL+VEK++ + RLA DRF
Sbjct: 1 MGWLRFSEAGRRFDCLKKPNSAHFIPVQVEEVIDITSAADYILVVEKESVFQRLANDRFC 60
Query: 279 NRFPCIIVTAKGQPDVATR 297
+R CI++T +G PDV+TR
Sbjct: 61 SRNRCIVITGRGYPDVSTR 79
>gi|344302621|gb|EGW32895.1| hypothetical protein SPAPADRAFT_54879 [Spathaspora passalidarum
NRRL Y-27907]
Length = 321
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 121/260 (46%), Gaps = 36/260 (13%)
Query: 134 KDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLF-QDQTQSDA 192
K +T + ++++ ++K VK + +++Q H T RD++Y DV+LF ++QT
Sbjct: 36 KTQTYTQFSSNIAEIQKFAALVKTIRILYQHAKNGNHTTVRDIYYHDVELFSRNQTNCTR 95
Query: 193 VLDDVA--CILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRV 250
+L+ + + LN+ ++KG ++++D + + T+ + IP N +
Sbjct: 96 LLELIVEDSLQWSLEKDLNIRPSQKG-----MMYADWNNSLHTTEPIL----IPVNYQHL 146
Query: 251 GDMQ---SDAMFILLVEKDAAYIRLAED-RFYNRFP-CIIVTAKGQPDVATRLFLRKMKM 305
+ + + I+++EKDA + + + +N F +++T KG PD T FL +
Sbjct: 147 FSKEITDNQKLLIIVIEKDAVFQSFCQYLKSHNTFQNFVVITGKGFPDRLTMRFLAWLTE 206
Query: 306 ELKLPVLALVDSDPYGLKILSVY-GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPE 364
+ DSD YGL+I Y CGS N+ + L +I+
Sbjct: 207 SFSSLTIGFFDSDVYGLRICQQYQKCGS-NLIFGGVFLLETNIR---------------- 249
Query: 365 QCRLPMTEQDIKTGKDLLEE 384
LP+T +DIK +LL E
Sbjct: 250 -NHLPITTRDIKLMMNLLNE 268
>gi|401826082|ref|XP_003887135.1| DNA topoisomerase VI subunit A [Encephalitozoon hellem ATCC 50504]
gi|392998293|gb|AFM98154.1| DNA topoisomerase VI subunit A [Encephalitozoon hellem ATCC 50504]
Length = 299
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 130/283 (45%), Gaps = 20/283 (7%)
Query: 137 TTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDD 196
+TLR L + R + +++ +I ++ I +R++FY DV +F+ Q+ ++
Sbjct: 15 STLRLLIELKS-RTLAMRIRLHEIIIEMQESGIDRNEREIFYMDVGVFKTQSAVKRMISS 73
Query: 197 VACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIP---PNIDRVGDM 253
+ L +R L V KG +G L F G T G +IP P++ V ++
Sbjct: 74 IVLELEVSRHELRVKNTLKGTFIGNLTFIKCGSF--STIEISSGDSIPQLIPDMTGVKEV 131
Query: 254 QSDAMFILLVEKDAAYIRLA-EDRFYNRFP-CIIVTAKGQPDVATRLFLRKMKMELKLPV 311
+ +L+VEKD R+A E R R ++V +G P T L L+ +E + +
Sbjct: 132 LCNYKRVLVVEKDTILQRIASEIRREKRLEGMLLVCGRGYPCRNTMLLLK--MLEHRTAI 189
Query: 312 LALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMT 371
L D DP+G+ I VY GSK S ++ I+ +G+ D+ + E +
Sbjct: 190 SGLFDFDPFGIHIFCVYKYGSKA----SPDIKVSTIERIGVCMEDVLRRNCHEG---GFS 242
Query: 372 EQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSS 414
E ++ DL D + K ++L + K+ +K E++A S
Sbjct: 243 ELNV---YDLKMIDRLAKFKDLTDDLLFLKKSNKKVEMEAFFS 282
>gi|363752201|ref|XP_003646317.1| hypothetical protein Ecym_4458 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889952|gb|AET39500.1| hypothetical protein Ecym_4458 [Eremothecium cymbalariae
DBVPG#7215]
Length = 367
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 91/174 (52%), Gaps = 14/174 (8%)
Query: 157 ILSLIHQLCLRNIHVTKRDLFYTDVKLFQ-DQTQSDAVLDDVACILGCTRSSLNVIAAEK 215
++ I L++ T RD++Y++V+L++ Q SD + C G +S+ ++AA+K
Sbjct: 102 VMKTIQTRMLKSETTTIRDVYYSNVELYKRQQVVSDWISTFEQC-FGVEKSTFRIVAAQK 160
Query: 216 GVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSD---AMFILLVEKDAAYIRL 272
G++ + ID T++ G IP +D ++++EKDA + +L
Sbjct: 161 GIISTPVPLK-----IDNTEI-RGTNLIPYITTESAVKCTDWKQVNKVVILEKDAVFHKL 214
Query: 273 AEDRFYNRFPCIIVTAKGQPDVATRLFLRKM--KMELKLPVLALVDSDPYGLKI 324
A D YN+ I+VT KG PD TR+FLR++ + V A DSDPYG+ I
Sbjct: 215 ARDAQYNK-DKILVTGKGYPDHLTRIFLRQLLKVAPAHIQVEAFCDSDPYGIDI 267
>gi|449328985|gb|AGE95260.1| meiotic recombination protein rec12 [Encephalitozoon cuniculi]
Length = 303
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 20/183 (10%)
Query: 172 TKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNG--D 229
+R++FY DV +F+ Q+ ++ +A L ++ L V KG+ +GRL F +
Sbjct: 51 NEREIFYMDVNVFRTQSVVRRLVSSIASELQISKHDLGVRNTLKGIFIGRLGFVRHHGLG 110
Query: 230 MIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPC----II 285
M++ + G G + P++ + ++ D ++VEKD R+A + R C +
Sbjct: 111 MVEMSSKG-GCPQLIPDMSDIAEVLCDYKKTVVVEKDTVLQRIASE--IEREKCLEEILF 167
Query: 286 VTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTP 345
V KG P T L L+ +E K V L D DP+G+ I +Y GSK TP
Sbjct: 168 VCGKGYPCKNTVLLLK--MIEHKTAVAGLFDLDPFGIHIFCIYKYGSKE---------TP 216
Query: 346 DIK 348
DI+
Sbjct: 217 DIR 219
>gi|19074189|ref|NP_584795.1| similarity to MEIOTIC RECOMBINATION PROTEIN REC12 [Encephalitozoon
cuniculi GB-M1]
gi|74621943|sp|Q8SVS9.1|SPO11_ENCCU RecName: Full=Probable meiosis-specific protein SPO11 homolog
gi|19068831|emb|CAD25299.1| similarity to MEIOTIC RECOMBINATION PROTEIN REC12 [Encephalitozoon
cuniculi GB-M1]
Length = 303
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 20/183 (10%)
Query: 172 TKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNG--D 229
+R++FY DV +F+ Q+ ++ +A L ++ L V KG+ +GRL F +
Sbjct: 51 NEREIFYMDVNVFRTQSVVRRLVSSIASELQISKHDLGVRNTLKGIFIGRLGFVRHHGLG 110
Query: 230 MIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPC----II 285
M++ + G G + P++ + ++ D ++VEKD R+A + R C +
Sbjct: 111 MVEMSSKG-GCPQLIPDMSDIAEVLCDYKKTVVVEKDTVLQRIASE--IEREKCLEEILF 167
Query: 286 VTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTP 345
V KG P T L L+ +E K V L D DP+G+ I +Y GSK TP
Sbjct: 168 VCGKGYPCKNTVLLLK--MIEHKTAVAGLFDLDPFGIHIFCIYKYGSKE---------TP 216
Query: 346 DIK 348
DI+
Sbjct: 217 DIR 219
>gi|116199071|ref|XP_001225347.1| hypothetical protein CHGG_07691 [Chaetomium globosum CBS 148.51]
gi|88178970|gb|EAQ86438.1| hypothetical protein CHGG_07691 [Chaetomium globosum CBS 148.51]
Length = 1001
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 26/168 (15%)
Query: 193 VLDDVACILGCTRSSLNVIAAEKGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVG 251
++D++A L R L ++AA KG++ G + I +G + C G G +P +I +
Sbjct: 1 MVDNLAFTLAVGREDLGIVAAAKGLISGPIDIILRDGSIHSCDVAGDTGTLLP-SISSIQ 59
Query: 252 DMQSDAM-FILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMK-MELKL 309
+ A ++L++EK+A KG PD+ TR FL + + +L
Sbjct: 60 KINFRATRWVLVIEKEA---------------------KGFPDLTTRRFLSVISTLRPQL 98
Query: 310 PVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL 357
+ LVD DP+G+ I+ Y GS+ + ++ N T P ++WLGI D+
Sbjct: 99 DLFILVDFDPHGVAIMRTYRYGSRRLDHEE-NATVPRLRWLGIVSDDI 145
>gi|50556168|ref|XP_505492.1| YALI0F16335p [Yarrowia lipolytica]
gi|49651362|emb|CAG78301.1| YALI0F16335p [Yarrowia lipolytica CLIB122]
Length = 337
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 32/284 (11%)
Query: 146 STVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVAC-ILGCT 204
++V + +I +++L +I ++ TKRD++Y V LF+ Q D+ + + L
Sbjct: 47 NSVNRFSIYLRLLQIIKSCLDKDKITTKRDIYYDAVNLFKTQGVVDSCIARITNDFLQVP 106
Query: 205 RSSLNVIAAEKGVVV----GRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQ--SDAM 258
R SLNV+AA+KG++ L S D + + P + D+Q
Sbjct: 107 RDSLNVVAAQKGLIYSACDSALTISYKDDYRAPVTIPTHTTTLIPYTTNISDIQLAPQVN 166
Query: 259 FILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSD 318
IL+VEK+A + L Y +++T KG PD T+ F+R + LP+ VD+D
Sbjct: 167 CILIVEKEAVFTTLCA---YIPKDTLLITGKGYPDHMTQDFVR--LFDEMLPLFICVDAD 221
Query: 319 PYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTG 378
P+G+ I + Y S + L + I ++G+ D ++ LP+ +++ K
Sbjct: 222 PHGIHIAATYRYRSFVRAPSLQGLGS-SISYIGVSLVDF------KRGHLPLEDKNRKHA 274
Query: 379 KDLLEE------------DFVKKNPGWVEELNLMVKTKQKAEIQ 410
LL D+++ N W EL M+ + AE+
Sbjct: 275 GRLLSAITGRQAEALELGDYIEMNK-WKLELQRMLFLGKVAEMN 317
>gi|154334835|ref|XP_001563664.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060686|emb|CAM37701.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 653
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 20/149 (13%)
Query: 221 RLIFSDNGDMIDC--TKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFY 278
RL + + D+ C T G + P + IL+VEK A + +L +
Sbjct: 277 RLTAAQHRDLTSCSATDAAATGFQVSPAV----------CAILVVEKHAVFAQLLREGLP 326
Query: 279 NRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKILSVY--GCGSKNM 335
PC+++T++G P A R L + L + PV+ LVD +P+GL IL+ Y S +
Sbjct: 327 RLLPCVLLTSQGFPTYAARQLLAHLHTALPRAPVIGLVDYNPHGLAILAAYRWATASDAL 386
Query: 336 SYDSANL-----TTPDIKWLGIRPSDLDK 359
+ SA++ P+++WLG+R + + +
Sbjct: 387 TAGSASMERHYYVVPNLRWLGVRTAHVSR 415
>gi|387595727|gb|EIJ93350.1| hypothetical protein NEPG_01692 [Nematocida parisii ERTm1]
Length = 305
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 128/266 (48%), Gaps = 37/266 (13%)
Query: 155 VKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAE 214
V +L++ + L + +T R++FY +LF++Q + +L D+ L T LN+I+
Sbjct: 51 VYLLNVYYVLLNESKEMTVREVFYRCKRLFKEQKKVIKILGDIEKRLNIT---LNIISGY 107
Query: 215 KGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAY---I 270
KG++ G I + ++I M ++ P + + + A +++VEK+A + I
Sbjct: 108 KGLLYGECKIVKEAEEII------MKNTSVIPRVRPGERVVTGASVVIVVEKEAIFNDII 161
Query: 271 RLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGC 330
+ E+ +I+T KG P T +FL + + + L D DP+GL I SVY
Sbjct: 162 QEIENIENKVGKVLIITGKGYPCTNTLMFLGVLS---SVRIYGLFDCDPHGLSIYSVYKY 218
Query: 331 GSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKN 390
GSK +L P+++ +G+ D +P+T + I + + + N
Sbjct: 219 GSK----KRPHLKIPNMQRIGVHLQD-----------IPVTRETIYIHRKY--QITLLMN 261
Query: 391 PGWVEEL----NLMVKTKQKAEIQAL 412
+EEL ++M+KTK+ A I+ +
Sbjct: 262 LKTIEELKNDIDIMIKTKRVASIEEI 287
>gi|387594072|gb|EIJ89096.1| hypothetical protein NEQG_00915 [Nematocida parisii ERTm3]
Length = 305
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 128/266 (48%), Gaps = 37/266 (13%)
Query: 155 VKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAE 214
V +L++ + L + +T R++FY +LF++Q + +L D+ L T LN+I+
Sbjct: 51 VYLLNVYYVLLNESKEMTVREVFYRCKRLFKEQKKVIKILGDIEKRLNIT---LNIISGY 107
Query: 215 KGVVVGRL-IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAY---I 270
KG++ G I + ++I M ++ P + + + A +++VEK+A + I
Sbjct: 108 KGLLYGECKIVKEAEEII------MKNTSVIPRVRPGERVVTGASVVIVVEKEAIFNDII 161
Query: 271 RLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGC 330
+ E+ +I+T KG P T +FL + + + L D DP+GL I SVY
Sbjct: 162 QEIENIENKVGKVLIITGKGYPCTNTLMFLGVLS---SVRIYGLFDCDPHGLSIYSVYKY 218
Query: 331 GSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKN 390
GSK +L P+++ +G+ D +P+T + I + + + N
Sbjct: 219 GSK----KRPHLKIPNMQRIGVHLQD-----------IPVTRETIYIHRKY--QITLLMN 261
Query: 391 PGWVEEL----NLMVKTKQKAEIQAL 412
+EEL ++M+KTK+ A I+ +
Sbjct: 262 LKTIEELKNDIDIMIKTKRVASIEEI 287
>gi|349578522|dbj|GAA23687.1| K7_Spo11p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 398
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 148 VRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT-RS 206
+++ I + +L ++ + + T RD+FY++V+LFQ Q LD + + R
Sbjct: 105 LKRCAILLNLLKVVMEKLPLGKNTTVRDIFYSNVELFQRQANVVQWLDVIRFNFKLSPRK 164
Query: 207 SLNVIAAEKGVVVGRLIFSDNGDMIDC-TKMGMGGKAIPPNID-RVGDMQSDAMF----- 259
SLN+I A+KG+V +++ C + M + I P + Q DA+
Sbjct: 165 SLNIIPAQKGLVYSPFPIDIYDNILTCENEPKMQKQTIFPGKPCLIPYFQDDAVIKLGTT 224
Query: 260 ----ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKM---ELKLPVL 312
I++VEK+A + +L + +++T KG PD TRLFL+K++ +L
Sbjct: 225 SMCNIVIVEKEAVFTKLVNNYHKLSTNTMLITGKGFPDFLTRLFLKKLEQYCSKLISDCS 284
Query: 313 ALVDSDPYGLKILSVYGCGSKNMSY 337
D+DPYG+ I Y ++ +Y
Sbjct: 285 IFTDADPYGISIALNYTHSNERNAY 309
>gi|451999964|gb|EMD92426.1| hypothetical protein COCHEDRAFT_1193911 [Cochliobolus
heterostrophus C5]
Length = 730
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 21/146 (14%)
Query: 288 AKGQPDVATRLFLRKMKMELK-LPVLALVDSDPYGLKILSVYGCGSKNMSYD------SA 340
AKG PDVA+R FLR++ +P+ LVD DP G+ ILS Y GS + ++ ++
Sbjct: 32 AKGYPDVASRQFLRQLGTNAHHIPMFVLVDLDPDGIAILSTYKYGSYRLMHEDVALMNTS 91
Query: 341 NLTTPDIKWLGIRPSDLDKYKIPE-----------QCRLPMTEQDIKTGKDLLEEDFVKK 389
L P+++WLG++ ++ + E Q + +T +D +LE D +
Sbjct: 92 ALCLPNVQWLGVKSDNMSPSLVGEDGTERKMIHQLQGLMRLTTRDRIKATRMLEWDLCAE 151
Query: 390 NP---GWVEELNLMVKTKQKAEIQAL 412
+ GW EL M+ KAE+Q L
Sbjct: 152 DGFERGWRRELQWMLMLNVKAEMQVL 177
>gi|378755995|gb|EHY66020.1| hypothetical protein NERG_00716 [Nematocida sp. 1 ERTm2]
Length = 313
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 120/246 (48%), Gaps = 33/246 (13%)
Query: 171 VTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDM 230
+T R++FY ++F++Q + V+D + L S ++ + KG+V G IFS
Sbjct: 73 ITIREIFYRCKRVFKNQNHTVRVIDYIKIRLKIEISL--IVPSYKGLVHG--IFSLK--- 125
Query: 231 IDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFY-NRFP-CIIVTA 288
I + M +I P I + + + A I++VEK+A + + +D Y NR IIVT
Sbjct: 126 IQEKVVQMENTSIIPRIQKETKIFTKASAIIVVEKEAVFNDIIQDTAYKNRMEEIIIVTG 185
Query: 289 KGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIK 348
KG P T FL + + + L D DP+GL I +VY GSK + +L P ++
Sbjct: 186 KGYPCTNTLKFL---SIARSIRIFGLFDCDPHGLSIYAVYKYGSKR----NPHLKVPSME 238
Query: 349 WLGIRPSDLDKYKIP--EQCRLPMTEQDIKTGKDL--LEEDFVKKNPGWVEELNLMVKTK 404
+GI Y+IP + ++ I ++L LEE ++N+M +T+
Sbjct: 239 RIGIHL-----YEIPVTPETMYITDKKQISLIRNLRNLEE--------LQNDINIMEETR 285
Query: 405 QKAEIQ 410
+KA I+
Sbjct: 286 RKASIE 291
>gi|6321765|ref|NP_011841.1| Spo11p [Saccharomyces cerevisiae S288c]
gi|134746|sp|P23179.1|SPO11_YEAST RecName: Full=Meiosis-specific protein SPO11; AltName:
Full=Sporulation-specific protein 11
gi|172660|gb|AAA65532.1| SPO11 protein [Saccharomyces cerevisiae]
gi|2289892|gb|AAB65075.1| Sporulation protein [Saccharomyces cerevisiae]
gi|45269563|gb|AAS56162.1| YHL022C [Saccharomyces cerevisiae]
gi|151944178|gb|EDN62470.1| endodeoxyribonuclease [Saccharomyces cerevisiae YJM789]
gi|285809876|tpg|DAA06663.1| TPA: Spo11p [Saccharomyces cerevisiae S288c]
Length = 398
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 148 VRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT-RS 206
+++ I + +L ++ + + T RD+FY++V+LFQ Q LD + + R
Sbjct: 105 LKRCAILLNLLKVVMEKLPLGKNTTVRDIFYSNVELFQRQANVVQWLDVIRFNFKLSPRK 164
Query: 207 SLNVIAAEKGVVVGRLIFSDNGDMIDC-TKMGMGGKAIPPNID-RVGDMQSDAMF----- 259
SLN+I A+KG+V +++ C + M + I P + Q DA+
Sbjct: 165 SLNIIPAQKGLVYSPFPIDIYDNILTCENEPKMQKQTIFPGKPCLIPFFQDDAVIKLGTT 224
Query: 260 ----ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKM---ELKLPVL 312
I++VEK+A + +L + +++T KG PD TRLFL+K++ +L
Sbjct: 225 SMCNIVIVEKEAVFTKLVNNYHKLSTNTMLITGKGFPDFLTRLFLKKLEQYCSKLISDCS 284
Query: 313 ALVDSDPYGLKILSVYGCGSKNMSY 337
D+DPYG+ I Y ++ +Y
Sbjct: 285 IFTDADPYGISIALNYTHSNERNAY 309
>gi|323308850|gb|EGA62086.1| Spo11p [Saccharomyces cerevisiae FostersO]
Length = 280
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Query: 170 HVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT-RSSLNVIAAEKGVVVGRLIFSDNG 228
+ T RD+FY++V+LFQ Q LD + + R SLN+I A+KG+V
Sbjct: 9 NTTVRDIFYSNVELFQRQANVVQWLDVIRFNFKLSPRKSLNIIPAQKGLVYSPFPIDIYD 68
Query: 229 DMIDC-TKMGMGGKAIPPNID-RVGDMQSDAMF---------ILLVEKDAAYIRLAEDRF 277
+++ C + M + I P + Q DA+ I++VEK+A + +L +
Sbjct: 69 NILTCXNEPKMQKQTIFPGKPCLIPXFQDDAVIKLGTTSMCNIVIVEKEAVFTKLVNNYH 128
Query: 278 YNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPV---LALVDSDPYGLKILSVYGCGSKN 334
+++T KG PD TRLFL+K++ + D+DPYG+ I Y ++
Sbjct: 129 KLSTNTMLITGKGFPDFLTRLFLKKLEQYCSXLISDCSIFTDADPYGISIALNYTHSNER 188
Query: 335 MSY 337
+Y
Sbjct: 189 NAY 191
>gi|407037581|gb|EKE38703.1| DNA topoisomerase, putative [Entamoeba nuttalli P19]
Length = 293
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 90/178 (50%), Gaps = 9/178 (5%)
Query: 157 ILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVA-CILGCTRSSLNVIAAEK 215
+L +I + L NI VTKR ++Y D LF+ Q D ++ ++ + + +V+AA+K
Sbjct: 71 VLKVIQEATLLNISVTKRHIYYLDKNLFKHQRVVDEIVKKLSERVFHLPKEDFHVVAAQK 130
Query: 216 GVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQ--SDAMFILLVEKDAAYIRLA 273
G + T++ + I P I + + Q + A IL++EK + ++
Sbjct: 131 SFFCGNITIVRET---KTTQITSEKETIIPLISTMKNTQIKTTATHILIIEKYTVFSQII 187
Query: 274 EDRFY--NRFPCIIVTAKGQPDVATRLFLRKM-KMELKLPVLALVDSDPYGLKILSVY 328
+ ++ N+ +I+TA G PD AT+ F+ + ++ + +VD DP+GL I + Y
Sbjct: 188 KTSWFSMNKNNILIITACGFPDSATKYFINLLISSNQQIKLYCMVDFDPFGLDIFNNY 245
>gi|323354751|gb|EGA86585.1| Spo11p [Saccharomyces cerevisiae VL3]
Length = 385
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 148 VRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT-RS 206
+++ I + +L ++ + + T RD+FY++V+LFQ Q LD + + R
Sbjct: 105 LKRCAILLNLLKVVMEKLPLGKNTTVRDIFYSNVELFQRQANVVQWLDVIRFNFKLSPRK 164
Query: 207 SLNVIAAEKGVVVGRLIFSDNGDMIDC-TKMGMGGKAIPPNID-RVGDMQSDAMF----- 259
SLN+I A+KG+V +++ C + M + I P + Q DA+
Sbjct: 165 SLNIIPAQKGLVYSPFPIDIYDNILTCANEPKMQKQTIFPGKPCLIPFFQDDAVIKLGTT 224
Query: 260 ----ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKM---ELKLPVL 312
I++VEK+A + +L + +++T KG PD TRLFL+K++ L
Sbjct: 225 SMCNIVIVEKEAVFTKLVNNYHKLSTNTMLITGKGFPDFLTRLFLKKLEQYCSNLISDCS 284
Query: 313 ALVDSDPYGLKILSVYGCGSKNMSY 337
D+DPYG+ I Y ++ +Y
Sbjct: 285 IFTDADPYGISIALNYTHSNERNAY 309
>gi|392298968|gb|EIW10063.1| Spo11p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 280
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 15/183 (8%)
Query: 170 HVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT-RSSLNVIAAEKGVVVGRLIFSDNG 228
+ T RD+FY++V+LFQ Q LD + + R SLN+I A+KG+V
Sbjct: 9 NTTVRDIFYSNVELFQRQANVVQWLDVIRFNFKLSPRKSLNIIPAQKGLVYSPFPIDIYD 68
Query: 229 DMIDC-TKMGMGGKAIPPNID-RVGDMQSDAMF---------ILLVEKDAAYIRLAEDRF 277
+++ C + M + I P + Q DA+ I++VEK+A + +L +
Sbjct: 69 NILTCENEPKMQKQTIFPGKPCLIPFFQDDAVIKLGTTSMCNIVIVEKEAVFTKLVNNYH 128
Query: 278 YNRFPCIIVTAKGQPDVATRLFLRKMKM---ELKLPVLALVDSDPYGLKILSVYGCGSKN 334
+++T KG PD TRLFL+K++ +L D+DPYG+ I Y ++
Sbjct: 129 KLSTNTMLITGKGFPDFLTRLFLKKLEQYCSKLISDCSIFTDADPYGISIALNYTHSNER 188
Query: 335 MSY 337
+Y
Sbjct: 189 NAY 191
>gi|357501995|ref|XP_003621286.1| DNA topoisomerase 6 subunit A [Medicago truncatula]
gi|355496301|gb|AES77504.1| DNA topoisomerase 6 subunit A [Medicago truncatula]
Length = 129
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 36/106 (33%)
Query: 192 AVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVG 251
+ LDD+AC L C R +LN++ A+KG V+G L ++ GD I+C K
Sbjct: 57 STLDDIACFLSCRRENLNIVGADKGEVIGNLCYTMEGDRIECFKR--------------- 101
Query: 252 DMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATR 297
++ F++R PCI+VTAKG PDV TR
Sbjct: 102 ---------------------SQLHFFDRIPCILVTAKGYPDVTTR 126
>gi|323333306|gb|EGA74703.1| Spo11p [Saccharomyces cerevisiae AWRI796]
Length = 267
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Query: 170 HVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT-RSSLNVIAAEKGVVVGRLIFSDNG 228
+ T RD+FY++V+LFQ Q LD + + R SLN+I A+KG+V
Sbjct: 9 NTTVRDIFYSNVELFQRQANVVQWLDVIRFNFKLSPRKSLNIIPAQKGLVYSPFPIDIYD 68
Query: 229 DMIDC-TKMGMGGKAIPPNID-RVGDMQSDAMF---------ILLVEKDAAYIRLAEDRF 277
+++ C + M + I P + Q DA+ I++VEK+A + +L +
Sbjct: 69 NILTCANEPKMQKQTIFPGKPCLIPFFQDDAVIKLGTTSMCNIVIVEKEAVFTKLVNNYH 128
Query: 278 YNRFPCIIVTAKGQPDVATRLFLRKMKM---ELKLPVLALVDSDPYGLKILSVYGCGSKN 334
+++T KG PD TRLFL+K++ L D+DPYG+ I Y ++
Sbjct: 129 KLSTNTMLITGKGFPDFLTRLFLKKLEQYCSNLISDCSIFTDADPYGISIALNYTHSNER 188
Query: 335 MSY 337
+Y
Sbjct: 189 NAY 191
>gi|190405760|gb|EDV09027.1| meiosis-specific protein SPO11 [Saccharomyces cerevisiae RM11-1a]
gi|256274400|gb|EEU09304.1| Spo11p [Saccharomyces cerevisiae JAY291]
gi|259147003|emb|CAY80258.1| Spo11p [Saccharomyces cerevisiae EC1118]
gi|323337401|gb|EGA78653.1| Spo11p [Saccharomyces cerevisiae Vin13]
gi|365765317|gb|EHN06828.1| Spo11p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 398
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 148 VRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT-RS 206
+++ I + +L ++ + + T RD+FY++V+LFQ Q LD + + R
Sbjct: 105 LKRCAILLNLLKVVMEKLPLGKNTTVRDIFYSNVELFQRQANVVQWLDVIRFNFKLSPRK 164
Query: 207 SLNVIAAEKGVVVGRLIFSDNGDMIDC-TKMGMGGKAIPPNID-RVGDMQSDAMF----- 259
SLN+I A+KG+V +++ C + M + I P + Q DA+
Sbjct: 165 SLNIIPAQKGLVYSPFPIDIYDNILTCANEPKMQKQTIFPGKPCLIPFFQDDAVIKLGTT 224
Query: 260 ----ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKM---ELKLPVL 312
I++VEK+A + +L + +++T KG PD TRLFL+K++ L
Sbjct: 225 SMCNIVIVEKEAVFTKLVNNYHKLSTNTMLITGKGFPDFLTRLFLKKLEQYCSNLISDCS 284
Query: 313 ALVDSDPYGLKILSVYGCGSKNMSY 337
D+DPYG+ I Y ++ +Y
Sbjct: 285 IFTDADPYGISIALNYTHSNERNAY 309
>gi|323304701|gb|EGA58462.1| Spo11p [Saccharomyces cerevisiae FostersB]
Length = 280
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Query: 170 HVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT-RSSLNVIAAEKGVVVGRLIFSDNG 228
+ T RD+FY++V+LFQ Q LD + + R SLN+I A+KG+V
Sbjct: 9 NTTVRDIFYSNVELFQRQANVVQWLDVIRFNFKLSPRKSLNIIPAQKGLVYSPFPIDIYD 68
Query: 229 DMIDC-TKMGMGGKAIPPNID-RVGDMQSDAMF---------ILLVEKDAAYIRLAEDRF 277
+++ C + M + I P + Q DA+ I++VEK+A + +L +
Sbjct: 69 NILTCANEPKMQKQTIFPGKPCLIPFFQDDAVIKLGTTSMCNIVIVEKEAVFTKLVNNYH 128
Query: 278 YNRFPCIIVTAKGQPDVATRLFLRKMKM---ELKLPVLALVDSDPYGLKILSVYGCGSKN 334
+++T KG PD TRLFL+K++ L D+DPYG+ I Y ++
Sbjct: 129 KLSTNTMLITGKGFPDFLTRLFLKKLEQYCSNLISDCSIFTDADPYGISIALNYTHSNER 188
Query: 335 MSY 337
+Y
Sbjct: 189 NAY 191
>gi|448119321|ref|XP_004203703.1| Piso0_000719 [Millerozyma farinosa CBS 7064]
gi|359384571|emb|CCE78106.1| Piso0_000719 [Millerozyma farinosa CBS 7064]
Length = 364
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 91/187 (48%), Gaps = 17/187 (9%)
Query: 149 RKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQ-DQTQSDAVLDDVACILGCT-RS 206
RK +KIL ++ L TKRD++Y DV LFQ QT + +LD ++ L +
Sbjct: 78 RKFATLIKILKVLITNLLTRKQTTKRDIYYQDVALFQKSQTYVNEILDCISYSLHLSMED 137
Query: 207 SLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQ----SDAMFILL 262
L + A++KG++ ++ ++ GD + P I R D++ DA+ IL
Sbjct: 138 DLGIFASQKGMLFSQIPLAE-GDTVFTFDT-------PTLIPRFHDIKLLGCPDAVIIL- 188
Query: 263 VEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELK-LPVLALVDSDPYG 321
EK+A + + +++T KG PD TR F+ + E K L L VD+D YG
Sbjct: 189 -EKEAIFKSFCQFVKEKNLNYLVITGKGFPDRLTRNFVTYLSKEYKNLAFLGFVDADVYG 247
Query: 322 LKILSVY 328
+ IL Y
Sbjct: 248 INILKTY 254
>gi|45187898|ref|NP_984121.1| ADR025Wp [Ashbya gossypii ATCC 10895]
gi|44982682|gb|AAS51945.1| ADR025Wp [Ashbya gossypii ATCC 10895]
gi|374107337|gb|AEY96245.1| FADR025Wp [Ashbya gossypii FDAG1]
Length = 364
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 15/193 (7%)
Query: 146 STVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLF-QDQTQSDAVLDDVACILGCT 204
+ R++ V +L +H T RD+FY +V+L+ + Q D ++ C G
Sbjct: 91 AGARRAATFVSVLKTVHTRMRSRQTATVRDVFYGNVELYGRQQVVVDWLVALEQC-FGVE 149
Query: 205 RSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAM-FILLV 263
+S ++AA+KG+V + G + G+G + V Q DA+ +++V
Sbjct: 150 KSVFRILAAQKGLVHVPVPLEVEGQELK----GVGLIPYVSDSSCVSCKQWDAVEAVIVV 205
Query: 264 EKDAAYIRLAEDRFY--NRFPCIIVTAKGQPDVATRLFLRKM--KMELKLPVLALVDSDP 319
EK+A + RL Y N+ II+T KG PD TR+FL ++ + V A+ DSDP
Sbjct: 206 EKEAVFHRLTRAAAYCSNK---IIITGKGYPDQLTRVFLYRLLASAPRNVAVRAIADSDP 262
Query: 320 YGLKILSVYGCGS 332
YG+ I+ Y CG+
Sbjct: 263 YGIDIVLKY-CGA 274
>gi|145967216|gb|ABP99000.1| meiotic transesterase, partial [Entamoeba histolytica]
Length = 280
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 13/180 (7%)
Query: 157 ILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVA-CILGCTRSSLNVIAAEK 215
+L +I + L NI VTKR ++Y D LF+ Q D ++ ++ + + +++AA+K
Sbjct: 71 VLKVIQEATLLNISVTKRHIYYLDKNLFKHQRVVDEIVKKLSEKVFHLPKEDFHIVAAQK 130
Query: 216 GVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQ--SDAMFILLVEKDAAYIRLA 273
G + T++ + + P I + + Q + A IL+VEK + ++
Sbjct: 131 SFFCGNITMVRET---KTTQITPEKETVIPLISTMKNTQIKTTATHILIVEKYTVFSQII 187
Query: 274 EDRFY--NRFPCIIVTAKGQPDVATRLFLRKM---KMELKLPVLALVDSDPYGLKILSVY 328
+ ++ N+ +I+TA G PD AT+ F+ + ++KL +VD DP+GL I + Y
Sbjct: 188 KTSWFSMNKNNILIITACGFPDSATKYFINLLISSNQQIKL--CCMVDFDPFGLDIFNNY 245
>gi|30578207|gb|AAP35100.1|AF485821_1 Spo11 [Entamoeba histolytica]
Length = 284
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 13/180 (7%)
Query: 157 ILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVA-CILGCTRSSLNVIAAEK 215
+L +I + L NI VTKR ++Y D LF+ Q D ++ ++ + + +++AA+K
Sbjct: 71 VLKVIQEATLLNISVTKRHIYYLDKNLFKHQRVVDEIVKKLSEKVFHLPKEDFHIVAAQK 130
Query: 216 GVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQ--SDAMFILLVEKDAAYIRLA 273
G + T++ + + P I + + Q + A IL+VEK + ++
Sbjct: 131 SFFCGNITMVRET---KTTQITPEKETVIPLISTMKNTQIKTTATHILIVEKYTVFSQII 187
Query: 274 EDRFY--NRFPCIIVTAKGQPDVATRLFLRKM---KMELKLPVLALVDSDPYGLKILSVY 328
+ ++ N+ +I+TA G PD AT+ F+ + ++KL +VD DP+GL I + Y
Sbjct: 188 KTSWFSMNKNNILIITACGFPDSATKYFINLLISSNQQIKL--CCMVDFDPFGLDIFNNY 245
>gi|67478608|ref|XP_654689.1| DNA topoisomerase [Entamoeba histolytica HM-1:IMSS]
gi|56471757|gb|EAL49301.1| DNA topoisomerase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 293
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 13/180 (7%)
Query: 157 ILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVA-CILGCTRSSLNVIAAEK 215
+L +I + L NI VTKR ++Y D LF+ Q D ++ ++ + + +++AA+K
Sbjct: 71 VLKVIQEATLLNISVTKRHIYYLDKNLFKHQRVVDEIVKKLSEKVFHLPKEDFHIVAAQK 130
Query: 216 GVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQ--SDAMFILLVEKDAAYIRLA 273
G + T++ + + P I + + Q + A IL+VEK + ++
Sbjct: 131 SFFCGNITMVRET---KTTQITPEKETVIPLISTMKNTQIKTTATHILIVEKYTVFSQII 187
Query: 274 EDRFY--NRFPCIIVTAKGQPDVATRLFLRKM---KMELKLPVLALVDSDPYGLKILSVY 328
+ ++ N+ +I+TA G PD AT+ F+ + ++KL +VD DP+GL I + Y
Sbjct: 188 KTSWFSMNKNNILIITACGFPDSATKYFINLLISSNQQIKL--CCMVDFDPFGLDIFNNY 245
>gi|449708290|gb|EMD47775.1| DNA topoisomerase, putative [Entamoeba histolytica KU27]
Length = 293
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 13/180 (7%)
Query: 157 ILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVA-CILGCTRSSLNVIAAEK 215
+L +I + L NI VTKR ++Y D LF+ Q D ++ ++ + + +++AA+K
Sbjct: 71 VLKVIQEATLLNISVTKRHIYYLDKNLFKHQRVVDEIVKKLSEKVFHLPKEDFHIVAAQK 130
Query: 216 GVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQ--SDAMFILLVEKDAAYIRLA 273
G + T++ + + P I + + Q + A IL+VEK + ++
Sbjct: 131 SFFCGNITMVRET---KTTQITPEKETVIPLISTMKNTQIKTTATHILIVEKYTVFSQII 187
Query: 274 EDRFY--NRFPCIIVTAKGQPDVATRLFLRKM---KMELKLPVLALVDSDPYGLKILSVY 328
+ ++ N+ +I+TA G PD AT+ F+ + ++KL +VD DP+GL I + Y
Sbjct: 188 KTSWFSMNKNNILIITACGFPDSATKYFINLLISSNQQIKL--CCMVDFDPFGLDIFNNY 245
>gi|170291065|ref|YP_001737881.1| DNA topoisomerase VI subunit A [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170175145|gb|ACB08198.1| DNA topoisomerase VI, A subunit [Candidatus Korarchaeum cryptofilum
OPF8]
Length = 368
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 135/291 (46%), Gaps = 48/291 (16%)
Query: 171 VTKRDLFYTDV------KLF-QDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLI 223
+TKRD +Y LF +DQ ++DA + + ILG R + ++ + +G + G +
Sbjct: 90 MTKRDFYYLHKVERLKGTLFPEDQRETDARIILMELILGMPREAFSITSDPRGWIYGDIE 149
Query: 224 FSD-NGDMIDCTKMGMGGKAIPP-----NIDRVGDMQSDAMFILLVEKDAAYIRLAEDRF 277
D +G ++ ++G G ++PP R+G A+ + K+ + + E++
Sbjct: 150 LIDRSGRVLKADQVGEMGYSVPPRPENIKFKRIGVKAVVAVEKVGPAKNMIELGIPEEK- 208
Query: 278 YNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSY 337
I +GQ + R FLR + E +P+ L D P+ L+I + S N ++
Sbjct: 209 ----KIAIAILQGQASRSMRRFLRMLSDE-GVPLAVLTDLSPWSLRIAATVIYNSINSAH 263
Query: 338 DSANLTTPDIKWLGIRPSDLDK--YKIPEQCRLPMTEQDIKTGKD-----LLEEDFVKKN 390
+L TP+ +++GI D+++ +K + P+T+ D K D L+ +F
Sbjct: 264 -IPHLATPEARFIGILTRDVEEGFFKDYKFALEPLTQADYKAALDNKSLPNLQNEF---- 318
Query: 391 PGWVEELNLMVKTKQKAEIQ----------ALSSFGFQYLSEVYLPLKLQQ 431
W +E + ++ K+KAE++ L + +YLSE KL+Q
Sbjct: 319 --WQKENDWFLQNKKKAELEIFKAMSPSAKTLKEYFIRYLSE-----KLEQ 362
>gi|157867175|ref|XP_001682142.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68125594|emb|CAJ03588.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 651
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 22/126 (17%)
Query: 238 MGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATR 297
+ G +PPN+ IL+VEK A + +L + PC+++TA+G P A R
Sbjct: 295 VAGFQVPPNV----------CAILVVEKHAVFAQLLREGLPRLLPCVLLTAQGYPTHAAR 344
Query: 298 LFLRKMKMEL-KLPVLALVDSDPYGLKILSVY---------GCGSKNMSYDSANLTTPDI 347
L + L + V+ LVD +P+GL IL+ Y GS +M +S P +
Sbjct: 345 RLLAHLHAALPRAAVVGLVDYNPHGLAILAAYRWAATSDVLPAGSASM--ESRYYPVPTL 402
Query: 348 KWLGIR 353
+WLG+R
Sbjct: 403 RWLGVR 408
>gi|344232668|gb|EGV64541.1| DNA topoisomerase IV, alpha subunit [Candida tenuis ATCC 10573]
Length = 355
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 18/206 (8%)
Query: 130 RIVLKDKT-TLRPFASLSTVRKSTITV-KILSLIHQLCLRN----IHVTKRDLFYTDVKL 183
++ L+ KT ++R F S+ +S + I++LI L ++N I+ TKR L+Y DV+L
Sbjct: 59 QLTLRAKTGSIRCFPSVGHEDRSLMKFTAIITLIKHL-IQNLESGIYTTKRHLYYQDVEL 117
Query: 184 FQ-DQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKA 242
FQ DQ++ + +LD +A L + + LN+ +KG++ + D+ +I + K
Sbjct: 118 FQKDQSECNQLLDLLAHSLKASITQLNIYPNQKGMMFA--LGFDDAILIPIKYQSVIEK- 174
Query: 243 IPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRK 302
I P+I V ++ DA+F LV + I+ + + VT KG PD+ T+ F+
Sbjct: 175 IHPHIRSVVIVEKDAIFRSLV----SCIKTQGQEKHK--GILFVTGKGFPDLLTKSFIWH 228
Query: 303 MKMELKLPVLALVDSDPYGLKILSVY 328
+ LP+ +DSD YG+ I Y
Sbjct: 229 LACS-GLPIYGFMDSDIYGILIFKSY 253
>gi|294655376|ref|XP_457515.2| DEHA2B13112p [Debaryomyces hansenii CBS767]
gi|199429911|emb|CAG85521.2| DEHA2B13112p [Debaryomyces hansenii CBS767]
Length = 335
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 13/185 (7%)
Query: 149 RKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQ-DQTQSDAVLDDVACILG-CTRS 206
R+ +K+L + +++ TKRD++Y DV LFQ Q ++ +++ + LG C
Sbjct: 61 RRFAAVIKVLKTMIVNLVQDRTTTKRDVYYQDVGLFQKSQPFANELIECIVGSLGMCAER 120
Query: 207 SLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQS--DAMFILLVE 264
L + A++KG++ G + F G D + P I R D+++ I+++E
Sbjct: 121 DLKIFASQKGLMFGNMRFRRAGVAWDLDE--------PVLIPRTNDLEAMEPPKGIVVIE 172
Query: 265 KDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKM-KMELKLPVLALVDSDPYGLK 323
K+A + + I VT KG PD T+ F+ + ++ +P+LA +DSD YGL
Sbjct: 173 KEAIFKSFCKYIQNIDVNLIAVTGKGFPDNLTKRFVGNLGQLYPDVPILAFMDSDVYGLS 232
Query: 324 ILSVY 328
I Y
Sbjct: 233 ICKNY 237
>gi|261328406|emb|CBH11383.1| meiotic recombination protein spo11, putative [Trypanosoma brucei
gambiense DAL972]
Length = 448
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 31/185 (16%)
Query: 172 TKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMI 231
T+RD++Y V+ F DQ + V+ + LG R L V+ +G V G L F I
Sbjct: 159 TQRDVYYRLVRFFPDQGCVNRVIPQLVQQLGLPRQLLGVVPGTRGCVGGSLSFHG----I 214
Query: 232 DCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQ 291
D GG + +F L Y R E++ ++R C+++T+ G
Sbjct: 215 D-----YGGTRL-------------RVFHYLF-----YGRNMEEKIFDRVSCVLLTSHGF 251
Query: 292 PDVATRLFL---RKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIK 348
P A L + ++ +PV+ALVD +P GL IL Y + + ++ + ++
Sbjct: 252 PTAAALTLLSNLHRTATDVGVPVVALVDYNPSGLSILQQYKHDTGRIQ-ENRYASVHSLR 310
Query: 349 WLGIR 353
WLG+R
Sbjct: 311 WLGLR 315
>gi|367004314|ref|XP_003686890.1| hypothetical protein TPHA_0H02530 [Tetrapisispora phaffii CBS 4417]
gi|357525192|emb|CCE64456.1| hypothetical protein TPHA_0H02530 [Tetrapisispora phaffii CBS 4417]
Length = 380
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 31/218 (14%)
Query: 147 TVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGC-TR 205
T K +I + ++++I +N T RD++Y +V+L+++Q L+ + L +R
Sbjct: 96 TSSKLSIFLSLINVIESTLKKNEVRTIRDVYYGNVELYKNQNTVVYWLNKIQKNLSLKSR 155
Query: 206 SSLNVIAAEKGVVVG----RLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMF-- 259
+ LN+I A+KG+ R++ G+ T + + P+ + + + +
Sbjct: 156 NELNIIPAQKGLCYIPFQLRIVNQKTGNY---TFVAKNESTLIPHFTKDSNFIIEEIELP 212
Query: 260 ----ILLVEKDAAYIRLAEDRFYNRFPC--------IIVTAKGQPDVATRLFLRKMKMEL 307
I++VEK+A Y D+F R+ C IIVT KG PD TRLFL K++
Sbjct: 213 NISKIIVVEKEAVY-----DKFI-RYHCSNINPEKMIIVTGKGYPDFLTRLFLNKLQTLK 266
Query: 308 KLPVLA---LVDSDPYGLKILSVYGCGSKNMSYDSANL 342
L + VD+DPYG+ I + Y + + Y L
Sbjct: 267 ALDESSWEIYVDADPYGISIATKYIISTSDQMYSCRKL 304
>gi|147920485|ref|YP_685722.1| DNA topoisomerase VI subunit A [Methanocella arvoryzae MRE50]
gi|110621118|emb|CAJ36396.1| type II DNA topoisomerase VI, subunit A [Methanocella arvoryzae
MRE50]
Length = 375
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 26/279 (9%)
Query: 172 TKRDLFYTDVKLFQ--------DQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRL- 222
TKRD +Y FQ Q +SD ++D + I+ R +LNVIA KG++ G +
Sbjct: 100 TKRDCYYMLKNQFQKYPWMDLTGQGESDRLIDTLERIIRLNRENLNVIADPKGLIYGDIT 159
Query: 223 IFSDNGDMIDCT--KMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNR 280
I + G C + + G A I + G ++ +EK ++ L + + +
Sbjct: 160 IVDEEGTEFTCGEREQSITGFAGQWEIKKYG-----VKAVIPIEKTGVFMDLKKLKVADE 214
Query: 281 FPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSA 340
+V GQP R + K+ E +P+ L D P+ I GS N ++ S
Sbjct: 215 LNIGLVHLGGQPARGCRALI-KLLSEKGIPIGVLTDFSPWSGMIAKSVMSGSINAAHLSG 273
Query: 341 NLTTPDIKWLGIRPSDLDKY--KIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELN 398
L +LGI +D+D + + + + P+++ D+ ++ L +++ + W E
Sbjct: 274 -LHASKAAFLGIESADVDTWLKDVWKSVQEPLSKNDLLRAQNNLSLPYMQDDY-WKGENE 331
Query: 399 LMVKTKQKAEIQALSSFGFQYLS-----EVYLPLKLQQK 432
V+ +K E++AL + L + YL KL++K
Sbjct: 332 WFVRHARKTELEALGTAAGSPLKKKEFYKSYLRAKLREK 370
>gi|50307459|ref|XP_453708.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642842|emb|CAH00804.1| KLLA0D14575p [Kluyveromyces lactis]
Length = 401
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 93/189 (49%), Gaps = 12/189 (6%)
Query: 146 STVRKSTITVKILSLIHQLCLR----NIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACIL 201
+T +K + ++L L+H L R T RD++Y +++LF+ Q + + + +
Sbjct: 115 NTKKKCSKVPQLLQLLHILNERIKTKKNTTTVRDIYYGNIELFESQQMVEMLFQRIEAMF 174
Query: 202 GCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFIL 261
+ NV++ +KG LI+S I + +P + + Q+ + ++
Sbjct: 175 NVEKLFFNVVSTQKG-----LIYSGPRLQIGSQLFHAECQLVPYDQGEMIVQQNQQLKVI 229
Query: 262 LVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELK--LPVLALVDSDP 319
++EKDA + +L + + + IIVT KG PD +R L K+ + L+ + DSDP
Sbjct: 230 VLEKDAIFQQLIQCQEMIK-DWIIVTGKGYPDHLSRELLHKLDLSLQGNVQFHIFTDSDP 288
Query: 320 YGLKILSVY 328
YG+ I++ Y
Sbjct: 289 YGIDIVTKY 297
>gi|84999554|ref|XP_954498.1| hypothetical protein [Theileria annulata]
gi|65305496|emb|CAI73821.1| hypothetical protein, conserved [Theileria annulata]
Length = 340
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 31/227 (13%)
Query: 160 LIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEK---- 215
++ L ++N T+R+LFY + Q++ + ++ R + NV K
Sbjct: 42 VLETLEIQNRTCTQRELFYNLGNFIKTQSEINNFGVNIT-----DRGTTNVTIHNKNFIN 96
Query: 216 ------GVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAY 269
G + G + F+ + ID + G I N+ + D + +IL+VEK + +
Sbjct: 97 YDVYVVGSIAGLIKFTLFDEEIDISNRPYG-LCISSNMLEL-DSEVYGNYILIVEKYSIF 154
Query: 270 IRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYG 329
++L R + P +++T G P TRL + K+ K + L D DP+G+ IL Y
Sbjct: 155 VQLCSQRIWETIPLVMITGNGFPSNNTRLLVNKISDNSKSEICYLGDYDPHGILILLSYI 214
Query: 330 CGSK---NMSYDSANL-----------TTPDIKWLGIRPSDLDKYKI 362
SK ++Y +N T +WLGIR D+ +Y +
Sbjct: 215 YSSKLVNEVNYCDSNTNQDHNINNPFRTVSRYRWLGIRSDDVLRYDV 261
>gi|325181612|emb|CCA16062.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 77
Score = 64.7 bits (156), Expect = 9e-08, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 274 EDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKIL 325
ED F R PC++VT +G PD++TR+F+R + L++PVL L D +P+GL I+
Sbjct: 17 EDSFIERLPCVLVTGRGFPDLSTRIFVRNLSDILQIPVLGLCDCNPFGLSIM 68
>gi|222616113|gb|EEE52245.1| hypothetical protein OsJ_34188 [Oryza sativa Japonica Group]
Length = 631
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 6/134 (4%)
Query: 194 LDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGD-MIDCTKMGMGGKAIPPNIDRVGD 252
++D +LG R SLN+ +G ++G ++F D MID + + IP +I V
Sbjct: 499 INDACMLLGTNRLSLNISVMSRGSIIGPVLFKVGEDVMIDAS---LRAVQIPHDIHLVDH 555
Query: 253 --MQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLP 310
++ F+L+VEK + + L F+ CII+T G+PD+ATR + K+ L +
Sbjct: 556 IKLKKPVSFVLVVEKLSIFNMLVNLNFHVTHNCIIITGCGKPDMATRGAVFKLNYCLPVK 615
Query: 311 VLALVDSDPYGLKI 324
V L D D GL+I
Sbjct: 616 VYILADLDLDGLQI 629
>gi|261332800|emb|CBH15795.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 453
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 126/312 (40%), Gaps = 82/312 (26%)
Query: 148 VRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQD-QTQSDAVLDDVACILGC--- 203
+R + +L + + + T+RD++Y + +LF + Q + ++ + + C
Sbjct: 76 LRYDAQALHVLCCVVNMVQEGLLCTERDVYYRNTELFPNGQRDTHCSIERLCRWMSCVCP 135
Query: 204 -------------TRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPP----- 245
TR L + A+ K +++G L F T + GG P
Sbjct: 136 LPPGSSAGERRRYTREDLRIGASGKSILLGNLAFDIPTVSATSTSLVSGGAQELPTCVPS 195
Query: 246 ----------------------------NIDRVGDMQSDAM--FILLVEKDAAYIRLAE- 274
N G + + + +++VEK++ LA+
Sbjct: 196 AKVPSVEVNAKHHISGVLVSTTLGLHAHNFRAAGAGRGNGVTAALVVVEKESTLHTLADV 255
Query: 275 ------DRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKI--- 324
+ NR C + +KG P A+RLFLR + EL +LP+L LVD DP+GL+I
Sbjct: 256 KSALGSESISNR--CAYLCSKGYPCRASRLFLRSLHRELPELPILVLVDGDPHGLRIALT 313
Query: 325 -LSVYG--------CGSK----NMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMT 371
+ ++G C +S A P I+W+G+RPS L + R P+T
Sbjct: 314 FMGLFGEDINRGRRCQPAERVPELSTSVAAALLP-IRWVGVRPSCLSH---DNKGRAPLT 369
Query: 372 EQDIKTGKDLLE 383
E D + K +++
Sbjct: 370 EHDKRVLKQVIQ 381
>gi|258570943|ref|XP_002544275.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904545|gb|EEP78946.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 220
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 34/156 (21%)
Query: 153 ITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIA 212
+ V+IL I + +KRD++Y D F Q D +DD+A +G R +L+V
Sbjct: 92 VVVRILGHISEAIHGQFVASKRDIYYLDPAYFGSQRLVDTYIDDIAYTIGVGRPALHV-- 149
Query: 213 AEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQ-SDAMFILLVEKDAAYIR 271
G+++ P +D + ++ S ++L++EK+A + R
Sbjct: 150 ---GILI-------------------------PRVDEIAELDLSGVRWVLVIEKEAVFHR 181
Query: 272 LAEDRFYNRFPC---IIVTAKGQPDVATRLFLRKMK 304
L ++ +++T KG PD++TR FLR K
Sbjct: 182 LVTSNYHKSSTAGGGMLITGKGYPDLSTRAFLRLWK 217
>gi|37359311|gb|AAN52840.1| SPO11-1C [Oryza sativa Japonica Group]
gi|37359315|gb|AAN52842.1| SPO11-1D [Oryza sativa Japonica Group]
Length = 302
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 6/134 (4%)
Query: 194 LDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGD-MIDCTKMGMGGKAIPPNIDRVGD 252
++D +LG R SLN+ +G ++G ++F D MID + + IP +I V
Sbjct: 170 INDACMLLGTNRLSLNISVMSRGSIIGPVLFKVGEDVMIDAS---LRAVQIPHDIHLVDH 226
Query: 253 --MQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLP 310
++ F+L+VEK + + L F+ CII+T G+PD+ATR + K+ L +
Sbjct: 227 IKLKKPVSFVLVVEKLSIFNMLVNLNFHVTHNCIIITGCGKPDMATRGAVFKLNYCLPVK 286
Query: 311 VLALVDSDPYGLKI 324
V L D D GL+I
Sbjct: 287 VYILADLDLDGLQI 300
>gi|115485829|ref|NP_001068058.1| Os11g0545300 [Oryza sativa Japonica Group]
gi|77551413|gb|ABA94210.1| Ubiquitin carboxyl-terminal hydrolase family protein, expressed
[Oryza sativa Japonica Group]
gi|113645280|dbj|BAF28421.1| Os11g0545300 [Oryza sativa Japonica Group]
gi|215694567|dbj|BAG89560.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 500
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 6/134 (4%)
Query: 194 LDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGD-MIDCTKMGMGGKAIPPNIDRVGD 252
++D +LG R SLN+ +G ++G ++F D MID + + IP +I V
Sbjct: 368 INDACMLLGTNRLSLNISVMSRGSIIGPVLFKVGEDVMIDAS---LRAVQIPHDIHLVDH 424
Query: 253 --MQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLP 310
++ F+L+VEK + + L F+ CII+T G+PD+ATR + K+ L +
Sbjct: 425 IKLKKPVSFVLVVEKLSIFNMLVNLNFHVTHNCIIITGCGKPDMATRGAVFKLNYCLPVK 484
Query: 311 VLALVDSDPYGLKI 324
V L D D GL+I
Sbjct: 485 VYILADLDLDGLQI 498
>gi|367017828|ref|XP_003683412.1| hypothetical protein TDEL_0H03420 [Torulaspora delbrueckii]
gi|359751076|emb|CCE94201.1| hypothetical protein TDEL_0H03420 [Torulaspora delbrueckii]
Length = 350
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 85/165 (51%), Gaps = 20/165 (12%)
Query: 172 TKRDLFYTDVKLFQDQTQSDAVLDDVACILG-CTRSSLNVIAAEKGVVVG--RLIFSDNG 228
T RD++YT+V+L+ DQ + + L +A L +R SLN++ A+KG+ ++ NG
Sbjct: 106 TIRDVYYTNVELYGDQRKVETGLCSIAKNLHLSSRDSLNILPAQKGLCYSPFDIVVQTNG 165
Query: 229 --DMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLV-EKDAAYIRL-----AEDRFYNR 280
++I M + R+ M+ DA L+V EK+A Y +L AED
Sbjct: 166 QENLIPAKTSSMIPYLAQNSTARIV-MRGDANLKLIVLEKEAVYNKLVGANTAED----- 219
Query: 281 FPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKI 324
I +T KG PD TRLFL +++ + L D+DP+G+ I
Sbjct: 220 --TIFITGKGYPDFLTRLFLNRLQQNICILDWRIYTDADPHGIDI 262
>gi|269914813|gb|ACZ52154.1| topoisomerase 6 subunit A-like protein [Oryza sativa Japonica
Group]
Length = 714
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 6/134 (4%)
Query: 194 LDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGD-MIDCTKMGMGGKAIPPNIDRVGD 252
++D +LG R SLN+ +G ++G ++F D MID + + IP +I V
Sbjct: 582 INDACMLLGTNRLSLNISVMSRGSIIGPVLFKVGEDVMIDAS---LRAVQIPHDIHLVDH 638
Query: 253 --MQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLP 310
++ F+L+VEK + + L F+ CII+T G+PD+ATR + K+ L +
Sbjct: 639 IKLKKPVSFVLVVEKLSIFNMLVNLNFHVTHNCIIITGCGKPDMATRGAVFKLNYCLPVK 698
Query: 311 VLALVDSDPYGLKI 324
V L D D GL+I
Sbjct: 699 VYILADLDLDGLQI 712
>gi|37359317|gb|AAN52843.1| SPO11-1B [Oryza sativa Japonica Group]
Length = 246
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 6/134 (4%)
Query: 194 LDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGD-MIDCTKMGMGGKAIPPNIDRVGD 252
++D +LG R SLN+ +G ++G ++F D MID + + IP +I V
Sbjct: 114 INDACMLLGTNRLSLNISVMSRGSIIGPVLFKVGEDVMIDAS---LRAVQIPHDIHLVDH 170
Query: 253 --MQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLP 310
++ F+L+VEK + + L F+ CII+T G+PD+ATR + K+ L +
Sbjct: 171 IKLKKPVSFVLVVEKLSIFNMLVNLNFHVTHNCIIITGCGKPDMATRGAVFKLNYCLPVK 230
Query: 311 VLALVDSDPYGLKI 324
V L D D GL+I
Sbjct: 231 VYILADLDLDGLQI 244
>gi|37359313|gb|AAN52841.1| SPO11-1A [Oryza sativa Japonica Group]
Length = 246
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 6/134 (4%)
Query: 194 LDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGD-MIDCTKMGMGGKAIPPNIDRVGD 252
++D +LG R SLN+ +G ++G ++F D MID + + IP +I V
Sbjct: 114 INDACMLLGTNRLSLNISVMSRGSIIGPVLFKVGEDVMIDAS---LRAVQIPHDIHLVDH 170
Query: 253 --MQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLP 310
++ F+L+VEK + + L F+ CII+T G+PD+ATR + K+ L +
Sbjct: 171 IKLKKPVSFVLVVEKLSIFNMLVNLNFHVTHNCIIITGCGKPDMATRGAVFKLNYCLPVK 230
Query: 311 VLALVDSDPYGLKI 324
V L D D GL+I
Sbjct: 231 VYILADLDLDGLQI 244
>gi|282162710|ref|YP_003355095.1| type II DNA topoisomerase VI subunit A [Methanocella paludicola
SANAE]
gi|282155024|dbj|BAI60112.1| type II DNA topoisomerase VI subunit A [Methanocella paludicola
SANAE]
Length = 377
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 112/254 (44%), Gaps = 17/254 (6%)
Query: 172 TKRDLFYTDVKLFQ--------DQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLI 223
TKRD +Y FQ Q +SD ++D + I+ R +LN+IA KG++ G +
Sbjct: 102 TKRDCYYMLKNQFQKYPWMDLSGQGESDRLIDTLERIIRMQRENLNIIADPKGLIYGDIT 161
Query: 224 FSD-NGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFP 282
D G +C + G + + V A ++ +EK ++ L + + +
Sbjct: 162 LVDEEGKEFNCHEREQGITGLAGQWE-VKSHHVKA--VIAIEKTGVFMDLKKLKVADELG 218
Query: 283 CIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANL 342
++ GQP R + + E +P+ L D P+ I GS ++ S L
Sbjct: 219 IGLIHLGGQPARGCRALINLLS-EKGIPIGVLTDLSPWSGMIAKSVLSGSIAAAHLSG-L 276
Query: 343 TTPDIKWLGIRPSDLDKY--KIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLM 400
+LGI SD+D + + + + P++ D ++ L +++ + W E +
Sbjct: 277 HASKAAFLGIESSDVDDWLKDVWKSVQEPLSGHDTARAQNNLSLPYMQDDY-WKGENSWF 335
Query: 401 VKTKQKAEIQALSS 414
VK+ +K E++AL +
Sbjct: 336 VKSGKKTELEALGT 349
>gi|403215709|emb|CCK70208.1| hypothetical protein KNAG_0D04680 [Kazachstania naganishii CBS
8797]
Length = 382
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 114/271 (42%), Gaps = 40/271 (14%)
Query: 106 AGNGFS---------FQVPSRASSNQLYVPELDRIVLKDKTTLRPFASLS--------TV 148
AGNG + SRA +L + + L PF S +
Sbjct: 32 AGNGLGGIPSWIHELLSLCSRAIEQHGETVQLIVATPRRRVLLLPFCGRSGDEQQVHWNL 91
Query: 149 RKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGC-TRSS 207
R+ + + +L ++ Q + T RD++Y++V+LF++Q L + + +
Sbjct: 92 RRVAVLLALLRVVQQRVAQGETSTTRDVYYSNVELFRNQETVTGTLKVLQTAFQLKSLAD 151
Query: 208 LNVIAAEKGVVVG----RLIFSDNGDMIDCTKMGMGGKAIPPNIDRVG---DMQSDAMFI 260
LNV+ A+KG+V L ++ + C M IP +R + +
Sbjct: 152 LNVVPAQKGLVFSTCPITLRWARRTPVSLCLN-PMESHLIPYLDERTTLTLPQDGTGVTV 210
Query: 261 LLVEKDAAY------IRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLAL 314
+++EK+A Y R+ + R + I+VT KG PD TR F+ + +++ V
Sbjct: 211 VILEKEAVYNKLVRCTRVGDPRLHR----ILVTGKGYPDNLTRRFISLVPETVQVHV--F 264
Query: 315 VDSDPYGLKILSVY--GCGSKNMSYDSANLT 343
VD+DPYG+ I Y C + Y A LT
Sbjct: 265 VDADPYGINIALKYMDACPQVKVQYAGATLT 295
>gi|241952102|ref|XP_002418773.1| meiosis-specific protein, putative; sporulation-specific protein,
putative [Candida dubliniensis CD36]
gi|223642112|emb|CAX44078.1| meiosis-specific protein, putative [Candida dubliniensis CD36]
Length = 310
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 98/224 (43%), Gaps = 26/224 (11%)
Query: 149 RKSTITVKILS-LIHQLCLRNIHVTKRDLFYTDVKLF-QDQTQSDAVLDD-VACILGCTR 205
R+ K++S LI L +N T RD++Y DV++F Q + +LD V C LG +
Sbjct: 35 RRFAAVCKLISILIKHLKTQNQITTIRDIYYQDVEVFSHSQKECRFLLDQFVECGLGWSL 94
Query: 206 SS-LNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNI-DRVG----DMQSDAMF 259
LN+ +KG+V G D + IP N D G +++ +
Sbjct: 95 CDDLNIHPTQKGLVYG--------DYFHALSIKSEPILIPINYTDFFGTGIMQIKNKKVL 146
Query: 260 ILLVEKDAAY----IRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 315
++++EKDA Y L + N+F +IVTAKG D T FL ++ +
Sbjct: 147 VVILEKDAVYQCLCTYLKQHSIINQF--LIVTAKGYSDGLTLRFLTWLRTNENCKFMGFF 204
Query: 316 DSDPYGLKILSVYGCGSKNMSYDSANL--TTPDIKWLGIRPSDL 357
DSD YGL I Y + Y L + P WL I D+
Sbjct: 205 DSDVYGLNIYWQYRQKLPGIEYSGIYLLESQPS-TWLSISLRDI 247
>gi|429329748|gb|AFZ81507.1| hypothetical protein BEWA_009190 [Babesia equi]
Length = 175
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 259 FILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFL---RKMKMELKLPVLAL 314
++L+VEK+ Y RL + R PC+++ ++G PD+ATR L R +L +P+L L
Sbjct: 28 YVLIVEKETIYYRLLQCAILKRHNPCVMILSRGFPDIATRELLYEIRNHSKKLNVPILCL 87
Query: 315 VDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSD 356
D + GL I + G +Y + + P++KWL + D
Sbjct: 88 TDFNRAGLNIALTFYRGPIKTNYYTNECSIPELKWLYLGKRD 129
>gi|71747804|ref|XP_822957.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832625|gb|EAN78129.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 453
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 127/311 (40%), Gaps = 80/311 (25%)
Query: 148 VRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQD-QTQSDAVLDDVACILGC--- 203
+R + +L + + + T+RD++Y + +LF + Q + ++ + + C
Sbjct: 76 LRYDAQALHVLCCVVNMVQEGLLCTERDVYYRNTELFPNGQRDTHCSIERLCRWMSCVCP 135
Query: 204 -------------TRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPP----- 245
TR L + A+ K +++G L F T + GG P
Sbjct: 136 LPPASSAGERRRYTREDLRIGASGKSILLGNLAFDIPTVSATSTSLVSGGAQELPTCVPS 195
Query: 246 ----------------------------NIDRVGDMQSDAM--FILLVEKDAAYIRLAE- 274
N G + + + +++VEK++ LA+
Sbjct: 196 AKVPSVEVNAKHHISGVLVSTTLGLHAHNFRAAGAGRGNGVTAALVVVEKESTLHTLADV 255
Query: 275 ------DRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKI-LS 326
+ +R C + +KG P A+RLFLR + EL +LP+L LVD DP+GL+I L+
Sbjct: 256 KSALGSESISDR--CAYLCSKGYPCRASRLFLRSLHRELPELPILVLVDGDPHGLRIALT 313
Query: 327 VYGCGSKNMSYDS--------ANLTTP------DIKWLGIRPSDLDKYKIPEQCRLPMTE 372
G ++++ L+T I+W+G+RPS L + R P+TE
Sbjct: 314 FMGLFGEDINRGRRCQPAERVPELSTSVVAALLPIRWVGVRPSCLSH---DNKGRAPLTE 370
Query: 373 QDIKTGKDLLE 383
D + K +++
Sbjct: 371 HDRRVLKQVIQ 381
>gi|340057315|emb|CCC51660.1| putative meiosis recombination protein [Trypanosoma vivax Y486]
Length = 425
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 117/282 (41%), Gaps = 63/282 (22%)
Query: 148 VRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLF-QDQTQSDAVLDDVACILG---- 202
+R+ +LS + + + + T+RD++Y + LF Q ++ + + +G
Sbjct: 78 LRRDAQVFCVLSSVFGMIQQKLECTERDIYYRNTSLFPGGQHETRRSTERLCQWMGGAHL 137
Query: 203 -----------C-TRSSLNVIAAEKGVVVGR---------------LIFSDNGD----MI 231
C R L++ A+ K ++ G L+ S N D ++
Sbjct: 138 SSSVESSTEKRCYVREDLHIGASGKSILTGNVSFDVPARSPGLRKPLVVSANTDAYGILV 197
Query: 232 DCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAA-----YIRLAEDRFYNRFPCIIV 286
D T MG+ G + G + + +++VEK++ R A D + + +
Sbjct: 198 D-TAMGLRGCNFRDAVGSGGQLSA----VVIVEKESTLRTLTVARAALDSDASVCRSVFL 252
Query: 287 TAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKILSVY-----GCGSKNMSYDSA 340
+KG P A+R+ LR + EL +P++ALVD DP+G++I+ + G + + +D
Sbjct: 253 CSKGYPCRASRMLLRNLHHELPSIPIVALVDGDPHGIRIVLTFMGLLGGNFNHTLRWDEN 312
Query: 341 NLTTPD--------IKWLGIRPSDLDKYKIPEQCRLPMTEQD 374
D I W G PS L + R P+T D
Sbjct: 313 KCGASDTPITQLIPIHWAGAHPSTLPHKSVG---RAPLTPHD 351
>gi|145967214|gb|ABP98999.1| meiotic transesterase, partial [Trypanosoma brucei]
Length = 367
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 63/117 (53%), Gaps = 19/117 (16%)
Query: 283 CIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKI-LSVYGCGSKNMSYDS- 339
C + +KG P A+RLFLR + EL +LP+L LVD DP+GL+I L+ G ++++
Sbjct: 182 CAYLCSKGYPCRASRLFLRSLHRELPELPILVLVDGDPHGLRIALTFMGLFGEDINRGRR 241
Query: 340 -------ANLTTP------DIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLE 383
L+T I+W+G+RPS L + R P+TE D + K +++
Sbjct: 242 CQPAERVPELSTSVVAALLPIRWVGVRPSCLSH---DNKGRAPLTEHDRRVLKQVIQ 295
>gi|444730821|gb|ELW71194.1| mRNA export factor [Tupaia chinensis]
Length = 504
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 174 RDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIF-SDNGDMID 232
RD++YTD +LF +QT D++++D++C+L R SL++++ KG++ G L + ++G ++
Sbjct: 38 RDIYYTDSQLFGNQTVVDSIINDISCMLKVPRRSLHILSTSKGLIAGNLGYIEEDGTKVN 97
Query: 233 CT 234
CT
Sbjct: 98 CT 99
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 330 CGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKI 362
CG+ +MS+++ NLT P I+WLG+ PSD+ + ++
Sbjct: 100 CGATSMSFEAHNLTVPAIRWLGLLPSDIKRARM 132
>gi|70950439|ref|XP_744543.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56524539|emb|CAH89172.1| hypothetical protein PC105088.00.0 [Plasmodium chabaudi chabaudi]
Length = 248
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 275 DRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKN 334
+R P I++T KG PD ATR + + L + + D DPYG++I Y G KN
Sbjct: 132 NRHIKTLPLILITGKGFPDYATRKIIFDLVNLFHLECVYVGDYDPYGIRIYLSYKEGCKN 191
Query: 335 MSYDSANLTTP--DIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
+ N P DIKW+G+ D++ + P++ LP++ ++ ++LL +
Sbjct: 192 ----NQNAIYPCKDIKWIGMCSEDVNFF--PKESLLPLSMKEKHVIQNLLND 237
>gi|207344826|gb|EDZ71836.1| YHL022Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 271
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 12/166 (7%)
Query: 148 VRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCT-RS 206
+++ I + +L ++ + + T RD+FY++V+LFQ Q LD + + R
Sbjct: 105 LKRCAILLNLLKVVMEKLPLGKNTTVRDIFYSNVELFQRQANVVQWLDVIRFNFKLSPRK 164
Query: 207 SLNVIAAEKGVVVGRLIFSDNGDMIDC-TKMGMGGKAIPPNID-RVGDMQSDAMF----- 259
SLN+I A+KG+V +++ C + M + I P + Q DA+
Sbjct: 165 SLNIIPAQKGLVYSPFPIDIYDNILTCANEPKMQKQTIFPGKPCLIPFFQDDAVIKLGTT 224
Query: 260 ----ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLR 301
I++VEK+A + +L + +++T KG PD TRLFL+
Sbjct: 225 SICNIVIVEKEAVFTKLVNNYHKLSTNTMLITGKGFPDFLTRLFLK 270
>gi|388855589|emb|CCF50812.1| related to meiotic recombination protein SPO11 [Ustilago hordei]
Length = 375
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 119/283 (42%), Gaps = 53/283 (18%)
Query: 180 DVKLFQDQTQSDAVLDDVACILGCT-RSSLNVIAAEKGVVVGRLIFSD-NGDMIDCTKMG 237
+ +LF Q SD ++D V +LGC RS L ++A+ +G+ G L S +G I G
Sbjct: 112 EARLFPSQQSSDRIIDQVCALLGCADRSELAIVASPRGLFSGSLTLSPPSGQGIVQCFSG 171
Query: 238 MGGKAIPPNIDR-----VGDMQSDAMFIL-----LVEKDAAYIRLAEDRFYNRFPCIIVT 287
+ IP I+ + F + +VEK+A + L + R ++VT
Sbjct: 172 LP-TLIPTEINAETWRATIPCTHETEFCIGHVVVVVEKEAVFKHLIQHPTVAR-QWVVVT 229
Query: 288 AKGQPDVATRLFLRKMKMELK------LPVLALVDSDPYGLKILSVY--GCGSKNMSYDS 339
KG PD ATR ++ + EL+ + ++ + D DPYG+ I Y CG
Sbjct: 230 GKGYPDHATRALIQILGAELECEKGGGVRMVGVFDCDPYGIDIHRQYVQVCGG------- 282
Query: 340 ANLTTPDIKWLGIRPSDLDKYKIPEQC------RLPMTEQDIKTGKDLL----EEDFVKK 389
++W+G+ D EQ R + ++ + L+ +E+
Sbjct: 283 -------VEWVGVELDDFLAQNDSEQASQLVQLRADERAKAVRMLRTLMGTSADEEL--- 332
Query: 390 NPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQK 432
W +L M+ T K EI+A +F L YL KL +
Sbjct: 333 ---WRTKLTNMLLTGYKVEIEAAYTFAVGGLVG-YLQHKLSTR 371
>gi|255716898|ref|XP_002554730.1| KLTH0F12320p [Lachancea thermotolerans]
gi|238936113|emb|CAR24293.1| KLTH0F12320p [Lachancea thermotolerans CBS 6340]
Length = 382
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 73/169 (43%), Gaps = 24/169 (14%)
Query: 172 TKRDLFYTDVKLFQDQTQSDAVLDDVACILGC-TRSSLNVIAAEKGVVV--------GRL 222
T RD+FY +V+L+++Q L+ ++ R L V+AA+KG+ +
Sbjct: 126 TIRDVFYLNVELYKNQRTVTEWLNAISKAFELPHRDMLRVVAAQKGLCFTPIDLHHGNSM 185
Query: 223 IFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFP 282
I +I I IDRV ++ DA+F LV D
Sbjct: 186 IMKRQKSLIPFMDANTSFTGIWSEIDRVVVLEKDAVFNTLV-----------DNILVSAN 234
Query: 283 CIIVTAKGQPDVATRLFLRKMKMELKLPVLAL---VDSDPYGLKILSVY 328
+IVT KG PD TR FL K+ + P +A DSDPYG+ I Y
Sbjct: 235 ALIVTGKGYPDWRTRHFLDKLMLSCP-PSVAFEVYTDSDPYGIDIALKY 282
>gi|354545342|emb|CCE42070.1| hypothetical protein CPAR2_806190 [Candida parapsilosis]
Length = 339
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 121/301 (40%), Gaps = 53/301 (17%)
Query: 135 DKTTLRPFASLST-------VRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLF-QD 186
D + R SLST K +K++ ++ Q N T RD++Y D++LF +D
Sbjct: 50 DSHSYRKLMSLSTPSVFASNCAKLAALIKLIKILKQNLTLNKSTTIRDIYYQDIELFNKD 109
Query: 187 QTQSDAVLDDVA--CILGCTRSSLNVIAAEKGVVVGRLIFSDNGD----MIDCTKMGMGG 240
Q + +L D+ C+ N+ +KG+ G IF + ID
Sbjct: 110 QQECRRMLTDLVENCLGWSLAQDFNIHPTQKGLTYGN-IFQQMQEPVLIPIDYCNYFKWN 168
Query: 241 KAIPPNIDRVGDMQSDAMFILLVEKDAA------YIRLAEDRFYNRFPCIIVTAKGQPDV 294
+I P ++ I+++EKDA Y++L + + + II+T KG D
Sbjct: 169 CSITPR---------SSLLIIVLEKDAVFHSFSKYMQLQSQQLHCNY--IILTGKGFSDN 217
Query: 295 ATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIR- 353
T+ F + L DSD +GL I Y KN PDIK+ G+
Sbjct: 218 LTQRFASWLARTYCTTTLGFFDSDAHGLLIYKRY----KN--------AVPDIKYSGMYL 265
Query: 354 -PSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQAL 412
S L+ +L + +D+ +L V P EL + +KAE+ +
Sbjct: 266 LESSLNS-------QLTASTRDVSIMSNLSSTSMVSLGPKVHRELTRGLFLYKKAEMNVV 318
Query: 413 S 413
S
Sbjct: 319 S 319
>gi|378732372|gb|EHY58831.1| hypothetical protein HMPREF1120_06833 [Exophiala dermatitidis
NIH/UT8656]
Length = 372
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 100/221 (45%), Gaps = 38/221 (17%)
Query: 163 QLCLRNIHVTKRDLFYTDVKLFQDQTQSD--------AVLDDVAC-------ILGCTRSS 207
+ +RN + K ++ V+ F+ Q +SD ++ D+A +LG S
Sbjct: 2 RFLMRNAALGKTEM----VRAFEYQIKSDRITPEDANKIMKDIALTIGVHPFLLGVEPES 57
Query: 208 LNVIAAEKGVVVGRLIFSDNGDMID-----CTKMGMGGKAIPP----NIDRVGDMQSDAM 258
+ + +G+ + + S +D T + G + P +I +V ++
Sbjct: 58 VGQVYIPEGIKLAMMETSSARVYVDKKAKYSTSLNGGKRHQIPRLLVDIAKVNQAEASIR 117
Query: 259 FILLVEKDA---AYIRLAED-RFYNRFPCIIVTAKGQPDVATRLFLR---KMKMELKLPV 311
+++ E + + + ED RF F +VT G PDVATR FL + + +P
Sbjct: 118 AVVVCEHRSIVEKFPKAFEDARFRGVF---LVTTGGYPDVATREFLHILARHRAFKTVPF 174
Query: 312 LALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGI 352
L + D DP G++I +V GSK ++ + +T P++KW G+
Sbjct: 175 LYISDGDPNGIEIYAVLKFGSKACAFAAPQMTCPNLKWAGL 215
>gi|407849011|gb|EKG03878.1| meiotic recombination protein spo11, putative [Trypanosoma cruzi]
Length = 452
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 69/136 (50%), Gaps = 26/136 (19%)
Query: 260 ILLVEKDAAY--IRLAEDRFYNRFP---CIIVTAKGQPDVATRLFLRKMKMEL-KLPVLA 313
++LVEK++ + +AE P C + +KG P A+R L K+ EL +LP+L
Sbjct: 243 VILVEKESTLRTLVVAEGVLGLGAPLNRCSFLCSKGYPCRASRTLLHKLHRELPQLPILV 302
Query: 314 LVDSDPYGLKI----LSVYGCGS-------KNMSYDSANL--TTPDIKWLGIRPSDLDKY 360
LVD DP+G++I L ++G G+ K + SA T +W+G+RPS L
Sbjct: 303 LVDGDPHGMRIALTFLGLFGGGASTRRRKQKKRPFASAEFISTLLPARWIGVRPSAL--- 359
Query: 361 KIPEQC--RLPMTEQD 374
P Q R P+T D
Sbjct: 360 --PHQATGRAPLTLLD 373
>gi|68483097|ref|XP_714484.1| hypothetical protein CaO19.11071 [Candida albicans SC5314]
gi|46436054|gb|EAK95423.1| hypothetical protein CaO19.11071 [Candida albicans SC5314]
Length = 309
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 96/224 (42%), Gaps = 26/224 (11%)
Query: 149 RKSTITVKILS-LIHQLCLRNIHVTKRDLFYTDVKLFQD-QTQSDAVLDD-VACILGCTR 205
R+ K++S LI L +N T RD++Y DV++F Q + +L V LG +
Sbjct: 35 RRFAAVCKLISILIKHLKAQNQITTIRDIYYQDVEVFNHCQNECRFLLGQLVERGLGWSL 94
Query: 206 SS-LNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDR-----VGDMQSDAMF 259
LN+ +KG+V G D + IP N + + ++ + +
Sbjct: 95 CDDLNIHPTQKGLVYG--------DYFQELSIKAEPILIPINYTKFFNTKITQIKVEKVI 146
Query: 260 ILLVEKDAAY----IRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 315
++++EKDA + L + NRF +IVTAKG D T FL ++ +
Sbjct: 147 VVILEKDAVFQCLCTHLRQHNIINRF--LIVTAKGYSDNLTLRFLTWLQTNENCKFIGFF 204
Query: 316 DSDPYGLKILSVYGCGSKNMSYDSANL--TTPDIKWLGIRPSDL 357
DSD YGL I Y M Y L + P WL I D+
Sbjct: 205 DSDVYGLNIYWQYNQKLPEMVYSGIYLLESQPH-TWLSIASRDI 247
>gi|407407968|gb|EKF31569.1| meiotic recombination protein spo11, putative [Trypanosoma cruzi
marinkellei]
Length = 452
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 21/108 (19%)
Query: 283 CIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKI----LSVYGCGS----- 332
C + +KG P A+R L K+ EL +LP+ LVD DP+G++I L ++G G+
Sbjct: 271 CFFLCSKGYPCRASRTLLHKLHRELPQLPIFVLVDGDPHGMRIALTFLGLFGGGASTRRR 330
Query: 333 --KNMSYDSANL--TTPDIKWLGIRPSDLDKYKIPEQC--RLPMTEQD 374
+ + SA T ++W+G+RPS L P Q R P+T D
Sbjct: 331 KQQKRPFSSAEFISTLLPVRWIGVRPSAL-----PHQATGRAPLTLLD 373
>gi|145967222|gb|ABP99003.1| meiotic transesterase [Acanthamoeba castellanii]
Length = 69
Score = 57.0 bits (136), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 290 GQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKW 349
G PD+ATR L+++ EL+LPV+ L D +P G+ + Y GS +S +L T DIKW
Sbjct: 1 GFPDMATRGLLKRLHEELRLPVVGLFDWNPGGMGVYITYRYGSVKSGLES-HLHTVDIKW 59
Query: 350 LGIRPSDLDK 359
LG+ DL++
Sbjct: 60 LGLCWDDLER 69
>gi|242208775|ref|XP_002470237.1| predicted protein [Postia placenta Mad-698-R]
gi|220730687|gb|EED84540.1| predicted protein [Postia placenta Mad-698-R]
Length = 612
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 141 PFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACI 200
PFA L KI+ +H+ L + TKRD++Y DV+LF+ Q D ++DDVA
Sbjct: 516 PFAQL---------FKIVDHMHEALLHGVPTTKRDIYYKDVRLFKSQAVVDRLVDDVAAT 566
Query: 201 LGCTRSSLNVIAAEKGVVVG 220
L R+ L V A+ KG++
Sbjct: 567 LDVGRADLFVRASSKGLIAA 586
>gi|238883753|gb|EEQ47391.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 309
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 96/224 (42%), Gaps = 26/224 (11%)
Query: 149 RKSTITVKILS-LIHQLCLRNIHVTKRDLFYTDVKLFQD-QTQSDAVLDD-VACILGCTR 205
R+ K++S LI L +N T RD++Y DV++F Q + +L V LG +
Sbjct: 35 RRFAAVCKLISILIKHLKAQNQITTIRDIYYQDVEVFNHCQNECRFLLGQLVERGLGWSL 94
Query: 206 SS-LNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDR-----VGDMQSDAMF 259
LN+ +KG+V G D + IP N + + ++ + +
Sbjct: 95 CDDLNIHPTQKGLVYG--------DYFQELSIKAEPILIPINYTKFFNTKITQIKVEKVI 146
Query: 260 ILLVEKDAAY----IRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 315
++++EKDA + L + NRF +IVTAKG D T FL ++ +
Sbjct: 147 VVILEKDAVFQCLCTHLRQHNIINRF--LIVTAKGYSDNLTLRFLTWLQTNENCKFIGFF 204
Query: 316 DSDPYGLKILSVYGCGSKNMSYDSANL--TTPDIKWLGIRPSDL 357
DSD YGL I Y M Y L + P WL I D+
Sbjct: 205 DSDVYGLNIYWQYNQKLPEMVYSGIYLLESQPH-TWLSITLRDI 247
>gi|68483202|ref|XP_714436.1| hypothetical protein CaO19.3589 [Candida albicans SC5314]
gi|46435999|gb|EAK95369.1| hypothetical protein CaO19.3589 [Candida albicans SC5314]
Length = 309
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 96/224 (42%), Gaps = 26/224 (11%)
Query: 149 RKSTITVKILS-LIHQLCLRNIHVTKRDLFYTDVKLFQD-QTQSDAVLDD-VACILGCTR 205
R+ K++S LI L +N T RD++Y DV++F Q + +L V LG +
Sbjct: 35 RRFAAVCKLISILIKHLKAQNQVTTIRDIYYQDVEVFNHCQNECRFLLGQLVERGLGWSL 94
Query: 206 SS-LNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDR-----VGDMQSDAMF 259
LN+ +KG+V G D + IP N + + ++ + +
Sbjct: 95 CDDLNIHPTQKGLVYG--------DYFQELSIKAEPILIPINYTKFFNTKITQIKVEKVI 146
Query: 260 ILLVEKDAAY----IRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALV 315
++++EKDA + L + NRF +IVTAKG D T FL ++ +
Sbjct: 147 VVILEKDAVFQCLCTHLRQHNIINRF--LIVTAKGYSDNLTLRFLTWLQTNENCKFIGFF 204
Query: 316 DSDPYGLKILSVYGCGSKNMSYDSANL--TTPDIKWLGIRPSDL 357
DSD YGL I Y M Y L + P WL I D+
Sbjct: 205 DSDVYGLNIYWQYNQKLPEMVYSGIYLLESQPH-TWLSITLRDI 247
>gi|156836466|ref|XP_001642294.1| hypothetical protein Kpol_206p4 [Vanderwaltozyma polyspora DSM
70294]
gi|156112787|gb|EDO14436.1| hypothetical protein Kpol_206p4 [Vanderwaltozyma polyspora DSM
70294]
Length = 374
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 20/199 (10%)
Query: 141 PFASL---STVRKSTITVKILSLIH-QLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDD 196
P+ S+ + K +I + +L +H +LC R + T RD++Y + +LF+ Q++
Sbjct: 78 PYESMKGDQQITKISILLTLLKTVHNKLCSREVS-TIRDVYYGNTELFKSQSKVVQWFGV 136
Query: 197 VACILGC-TRSSLNVIAAEKGVVVG--RLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDM 253
+ +G +R NV+ A+KG+ L F+ D G + P I + +
Sbjct: 137 LQHSMGLKSRDVFNVVPAQKGLCFSPVNLYFTRATADNDVVANKAG---LIPYISQDSRL 193
Query: 254 -----QSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMK---M 305
S I+++EK+A + +L + + CI+VT KG PD TRLFL K++
Sbjct: 194 FWKEDISQIRKIIVIEKEAVFNKLTINP-NDIQHCILVTGKGYPDFLTRLFLNKLQKLTH 252
Query: 306 ELKLPVLALVDSDPYGLKI 324
+ D+DP+G+ I
Sbjct: 253 SSDIDWEVYTDADPHGVHI 271
>gi|406911162|gb|EKD51012.1| hypothetical protein ACD_62C00364G0003 [uncultured bacterium]
Length = 149
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 13/128 (10%)
Query: 297 RLFLRKMKMELKLPVLALVDSDPYGLK-ILSVYGCGSKNMSYDSANLTTPDIKWLGIRPS 355
R + R ++ +LK+P+ D D Y ++ I GS ++ P++++LG+ P
Sbjct: 2 RGWCRLIQNDLKIPLYFFGDLDAYTIQNIYRTLKAGSAASLIRNSEFCAPEVRFLGVLPE 61
Query: 356 DLDKYKIPEQCRLPMTEQDIKTG------KDLLEEDFV---KKNPGWVEELNLMVKTKQK 406
D+ KY +P+ P+ E+D++ G +D+L+ D KKN G LN ++K K++
Sbjct: 62 DIKKYDLPD---YPVREKDVQEGRALKKARDVLQNDPFFKDKKNKGLSNILNWLLKNKRR 118
Query: 407 AEIQALSS 414
E QA S
Sbjct: 119 CEQQAYFS 126
>gi|366994448|ref|XP_003676988.1| hypothetical protein NCAS_0F01490 [Naumovozyma castellii CBS 4309]
gi|342302856|emb|CCC70633.1| hypothetical protein NCAS_0F01490 [Naumovozyma castellii CBS 4309]
Length = 363
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 36/215 (16%)
Query: 149 RKSTITVKILSLIHQLCLRNIHV-TKRDLFYTDVKLFQDQTQSDAVLDDVACILGC-TRS 206
RK I IL+ + L N V T RDL+Y++V+L+++Q L + ++
Sbjct: 96 RKVAILFNILNTVKN-RLENGQVSTIRDLYYSNVELYENQRNISFWLSILTRSFRLPSKD 154
Query: 207 SLNVIAAEKGVVVGRL-IFSDNGDMI---------------DCTKMGMGGKAIPPNIDRV 250
LN+I A+KG++ + I N + + D TK+ + +A +I+RV
Sbjct: 155 LLNIIPAQKGLIYSPIKIMVINNEKVQIITPFETTLIPYLGDNTKIVLSKQA-NVHINRV 213
Query: 251 GDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLP 310
L++EK+A + +L R ++ I++T KG PD TR FL+ K
Sbjct: 214 ----------LVLEKEAIFSKLVSSRNSDQ---ILITGKGYPDFLTRKFLKLFHESEKES 260
Query: 311 VL---ALVDSDPYGLKILSVYGCGSKNMSYDSANL 342
+ + D+DP+G+ I +Y + ++Y A L
Sbjct: 261 IKNWDIITDADPHGVNITFIYMQTNTYLNYCGATL 295
>gi|260950111|ref|XP_002619352.1| hypothetical protein CLUG_00511 [Clavispora lusitaniae ATCC 42720]
gi|238846924|gb|EEQ36388.1| hypothetical protein CLUG_00511 [Clavispora lusitaniae ATCC 42720]
Length = 339
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 32/199 (16%)
Query: 150 KSTITVKILS-LIHQLCLRNIHVTKRDLFYTDVKLFQD-QTQSDAVLDDVACILGCT-RS 206
K TV++++ LI QL R + T RD++Y DV LF+ Q S+ VLD +A L + +S
Sbjct: 42 KFAATVRVMNILIDQLQNRQVS-TMRDIYYKDVTLFKGRQAHSNNVLDAIANSLNVSLQS 100
Query: 207 SLNVIAAEKGVV---------VG---RLIFSD-NGDMIDCTKMGMGGKAIPPNIDRVGDM 253
L V KGV+ VG ++ F N ++ C + ++ ++D V
Sbjct: 101 DLGVYPTPKGVIWSNNPIEITVGEQKKMSFDPCNEPLLICHRETSENLSVVGDVDMVVVF 160
Query: 254 QSDAM---FILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMEL-KL 309
+ +A+ F+ V+K A ++L I+ T KG PD AT FL ++ L
Sbjct: 161 EKEAILKSFMCFVKKIATGVKL-----------ILATGKGFPDRATLSFLGGLQACLPST 209
Query: 310 PVLALVDSDPYGLKILSVY 328
P++ VDSD YGL+I Y
Sbjct: 210 PMVYFVDSDVYGLQIFWSY 228
>gi|290559172|gb|EFD92531.1| Spo11/DNA topoisomerase [Candidatus Parvarchaeum acidophilus
ARMAN-5]
Length = 86
Score = 55.5 bits (132), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 350 LGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEI 409
+G+ D+DKY++ + + DI K + ++ K N W+EEL+ M K K E+
Sbjct: 1 MGLTMEDIDKYELRRHL-IKFKDVDIARIKQIKNYEWFKNNKKWMEELSKMEKLGAKVEL 59
Query: 410 QALSSFGFQYLSEVYLPLKLQQKDWL 435
A ++ G +++E YLP KL+ KD+L
Sbjct: 60 DAFTAKGLSFMTETYLPEKLKDKDFL 85
>gi|384489947|gb|EIE81169.1| hypothetical protein RO3G_05874 [Rhizopus delemar RA 99-880]
Length = 285
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 51/151 (33%)
Query: 157 ILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKG 216
+L +I++ I VTKRD+FY DV+LF Q+ V AA KG
Sbjct: 139 VLRMIYEALAYKIVVTKRDMFYRDVELFHTQS---------------------VSAASKG 177
Query: 217 VVVGRLIFS-DNGDMIDC-TKMG------MGGKAIPPNIDRVGDMQSDAMFILLVEKDAA 268
+V G ++ N M+DC T++ + G IPP + ++Q A ++++EK+
Sbjct: 178 LVFGSIVIKLKNNKMLDCMTRINKLDCHDVQGLLIPP-ASEIAEIQCKARCMIIIEKE-- 234
Query: 269 YIRLAEDRFYNRFPCIIVTAKGQPDVATRLF 299
KG PD+ATR F
Sbjct: 235 -------------------GKGYPDLATRQF 246
>gi|145967208|gb|ABP98996.1| meiotic transesterase, partial [Trypanosoma cruzi]
Length = 175
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 21/108 (19%)
Query: 283 CIIVTAKGQPDVATRLFLRKMKMEL-KLPVLALVDSDPYGLKI----LSVYGCGS----- 332
C + +KG P A+R L K+ EL +LP+L LVD DP+G++I L ++G +
Sbjct: 29 CSFLCSKGYPCRASRTLLHKLHCELPQLPILVLVDGDPHGMRIALTFLGLFGGVASTRRR 88
Query: 333 --KNMSYDSANL--TTPDIKWLGIRPSDLDKYKIPEQC--RLPMTEQD 374
K + SA T +W+G+RPS L P Q R P+T D
Sbjct: 89 KQKKRPFASAEFISTLXPARWIGVRPSAL-----PHQATGRAPLTPLD 131
>gi|71421569|ref|XP_811832.1| meiosis recombination protein SPO11 [Trypanosoma cruzi strain CL
Brener]
gi|70876541|gb|EAN89981.1| meiosis recombination protein SPO11, putative [Trypanosoma cruzi]
Length = 452
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 26/136 (19%)
Query: 260 ILLVEKDAAY--IRLAEDRFYNRFP---CIIVTAKGQPDVATRLFLRKMKMEL-KLPVLA 313
++LVEK++ + +AE P C + +KG P A+R L K+ EL +LP+L
Sbjct: 243 VILVEKESTLRTLVVAEGVLGLGAPLNRCSFLCSKGYPCRASRTLLHKLHCELPQLPILV 302
Query: 314 LVDSDPYGLKI----LSVYGCGS-------KNMSYDSANL--TTPDIKWLGIRPSDLDKY 360
LVD DP+G++I L ++G + K + SA T +W+G+RPS L
Sbjct: 303 LVDGDPHGMRIALTFLGLFGGVASTRRRKQKKRPFASAEFISTLLPARWIGVRPSAL--- 359
Query: 361 KIPEQC--RLPMTEQD 374
P Q R P+T D
Sbjct: 360 --PHQATGRAPLTPLD 373
>gi|403413712|emb|CCM00412.1| predicted protein [Fibroporia radiculosa]
Length = 213
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 156 KILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEK 215
K++ L H + +TKRD++Y DVKLF+ Q D +++D+A R L + A+ K
Sbjct: 129 KVMDLAHNAIAEAVPITKRDIYYHDVKLFKSQAVVDKLIEDLAATFDIRRGDLFIRASSK 188
Query: 216 GVVVG 220
G+V G
Sbjct: 189 GLVSG 193
>gi|124360244|gb|ABN08257.1| DNA topoisomerase, type II [Medicago truncatula]
Length = 73
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 192 AVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTK 235
+ LDD+AC L C R +LN++ A+KG V+G L ++ GD I+C K
Sbjct: 21 STLDDIACFLSCRRENLNIVGADKGEVIGNLCYTMEGDRIECFK 64
>gi|365989648|ref|XP_003671654.1| hypothetical protein NDAI_0H02370 [Naumovozyma dairenensis CBS 421]
gi|343770427|emb|CCD26411.1| hypothetical protein NDAI_0H02370 [Naumovozyma dairenensis CBS 421]
Length = 381
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 116/270 (42%), Gaps = 41/270 (15%)
Query: 172 TKRDLFYTDVKLFQDQTQSDAVLDDVACILGC-TRSSLNVIAAEKGVVVGRLIFSDNGDM 230
T RD+FY++++L+ Q L + +R SLNVIAA+KG++ + + +
Sbjct: 125 TIRDIFYSNMELYGRQQTIVYWLSILTEAFNLKSRDSLNVIAAQKGLIFSPVQITVTTTV 184
Query: 231 IDCTKMGMGGKAIPPN----IDRVGDM-------QSDAMFILLVEKDAAYIRLAEDRFYN 279
K+ + I P I + D Q + + +L++EK+A + ++ +
Sbjct: 185 EKGDKVVSESQVIQPFETVLIPYINDATVINIPSQQNIIKVLILEKEAVFNKIVSNYSTC 244
Query: 280 RFPC----IIVTAKGQPDVATRLFLR---KMKMELKLPVLALVDSDPYGLKILSVYGCGS 332
C I++T KG PD TR F+ K L D+DP+G+ I +Y
Sbjct: 245 CTNCNVKDILITGKGYPDFLTRNFINLFYKCCSSFIGQWHILTDADPHGVNIAYMYA--- 301
Query: 333 KNMSYDSANLTTPDIKWLG------IRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDF 386
T P I ++G IRP+ D + LP+ ++DI +++
Sbjct: 302 ---------KTIPRIDYMGIPLLELIRPNSKDASNSAQ--LLPLKQRDISLLLAMVQRVV 350
Query: 387 VKKNPG--WVEELNLMVKTKQKAEIQALSS 414
+N ++ EL + +K E+ ++ S
Sbjct: 351 TTENISKVFIRELQRQLFFHKKGEMNSIFS 380
>gi|383318869|ref|YP_005379710.1| DNA topoisomerase VI, subunit A [Methanocella conradii HZ254]
gi|379320239|gb|AFC99191.1| DNA topoisomerase VI, subunit A [Methanocella conradii HZ254]
Length = 431
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 130/310 (41%), Gaps = 29/310 (9%)
Query: 144 SLSTVRKSTITVKILSLIHQLC---LRNIHVTKRDLFYTDVKLFQ--------DQTQSDA 192
S S + ++ K+ LI+ + N TKRD +Y FQ Q +SD
Sbjct: 125 STSNIDQAASMAKLQFLINHIIETIAANSVSTKRDCYYMLKNQFQKYPWMDLDGQGESDR 184
Query: 193 VLDDVACILGCTRSSLNVIAAEKGVVVGRL-IFSDNGDMIDCT--KMGMGGKAIPPNIDR 249
++ + I+ R +LN+ A KG++ G + + + G C + + G A +
Sbjct: 185 LIGTLERIIRMQRENLNITADPKGLIYGDISLIDEEGKEFSCKEREQSITGLAGQWEVKS 244
Query: 250 VGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKL 309
G ++ +EK ++ L + + + ++ GQP R + + + +
Sbjct: 245 YG-----VKALVAIEKTGVFMDLKKLKVADGLKIGLIHLGGQPARGCRALISLLSCK-GI 298
Query: 310 PVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY--KIPEQCR 367
P+ L D P+ I GS S L P +LGI SD+D + + + +
Sbjct: 299 PIGVLTDLSPWSGMIAKSVLSGSI-ASAHLRGLHAPGAAFLGIESSDVDSWLKDVWKGVQ 357
Query: 368 LPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLS-----E 422
P+++ D+ ++ L +++ W E + ++ +K E++AL + L E
Sbjct: 358 EPLSDLDLARARNNLSLPYMQDGY-WKGENSWFIRNGKKTELEALGTAAGSPLKKKSFYE 416
Query: 423 VYLPLKLQQK 432
Y+ KL++K
Sbjct: 417 KYIRAKLKEK 426
>gi|359416373|ref|ZP_09208705.1| DNA topoisomerase VI subunit A [Candidatus Haloredivivus sp. G17]
gi|358033264|gb|EHK01837.1| DNA topoisomerase VI subunit A [Candidatus Haloredivivus sp. G17]
Length = 106
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 303 MKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY 360
M EL+LPV D DP+G I SV GS ++++ S L TPD K +G+ D+++Y
Sbjct: 5 MHNELELPVYVFTDGDPWGYYIYSVLKSGSMSLAFQSDRLATPDAKLIGMTMEDIEEY 62
>gi|401418516|ref|XP_003873749.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489981|emb|CBZ25241.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 652
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 18/128 (14%)
Query: 240 GKAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLF 299
G +PPN+ IL+VEK A + +L + PC+++TA+G P A R
Sbjct: 297 GFQVPPNV----------CAILVVEKHAVFSQLLREGLLRLLPCVLLTAQGYPTHAARRL 346
Query: 300 LRKMKMEL-KLPVLALVDSDPYGLKILSVYGCGS-------KNMSYDSANLTTPDIKWLG 351
L + L + V+ LVD +P+GL IL+ Y + + S +S P ++WLG
Sbjct: 347 LANLHTALPRAAVVGLVDYNPHGLAILAAYRWAATSDAPPFGSASMESRYYAVPTLRWLG 406
Query: 352 IRPSDLDK 359
+R + + +
Sbjct: 407 VRAAHVAR 414
>gi|410083990|ref|XP_003959572.1| hypothetical protein KAFR_0K00820 [Kazachstania africana CBS 2517]
gi|372466164|emb|CCF60437.1| hypothetical protein KAFR_0K00820 [Kazachstania africana CBS 2517]
Length = 338
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 19/165 (11%)
Query: 168 NIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLN-VIAAEKGVVVGRL---I 223
N T RD++Y++V LF+ Q + ++ I+ +N VI A+KG+V I
Sbjct: 102 NTTSTIRDVYYSNVPLFKTQRTVNYYVN----IIRLNFPGMNSVIPAQKGLVYTSATMEI 157
Query: 224 FSDNGDMIDCTKMGMGGKA--IP--PNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYN 279
+ +G + M MGG + IP + +D I+++EK+A Y +L +++
Sbjct: 158 YHADGSKM----MLMGGTSSLIPYLYETSTIACAVADFDKIIILEKEAVYSKLVQNKL-- 211
Query: 280 RFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKI 324
+I+T KG PD TR F+ K+ L + VD+DP G+ I
Sbjct: 212 MLNSLIITGKGYPDHLTRKFINKVS-HLCSDIEIFVDADPDGICI 255
>gi|440463984|gb|ELQ33495.1| meiosis-specific topoisomerase Spo11 [Magnaporthe oryzae Y34]
gi|440484008|gb|ELQ64208.1| meiosis-specific topoisomerase Spo11 [Magnaporthe oryzae P131]
Length = 406
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 288 AKGQPDVATRLFLRKMK-MELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPD 346
KG PD++TR + ++ ++P+ +LVD DP G++IL Y S + ++ + + +
Sbjct: 216 GKGYPDLSTRNLVYCLREARPRIPIYSLVDYDPDGIRILCTYKYSSSALEHERQSAVS-N 274
Query: 347 IKWLGIRPSDLDKYKI 362
I+W+GIR SD+ ++ +
Sbjct: 275 IQWIGIRLSDIKEHHL 290
>gi|413921268|gb|AFW61200.1| hypothetical protein ZEAMMB73_857840 [Zea mays]
Length = 100
Score = 51.6 bits (122), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 53/86 (61%), Gaps = 5/86 (5%)
Query: 346 DIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQ 405
++KWLG+R DL + IPE + +D++ K L+ F++++ EL LMV+ +
Sbjct: 11 NVKWLGVRGGDL--HLIPEDAFQELKPRDLQIAKSLMSSKFLQESHR--AELALMVERGK 66
Query: 406 KAEIQALSSFGFQYLSEVYLPLKLQQ 431
+A+I+AL S GF +L + Y+ K+++
Sbjct: 67 RADIEALYSHGFDFLGK-YIARKIRR 91
>gi|145910313|gb|ABP98812.1| SPO11 meiotic recombination protein [Oryzias latipes]
Length = 84
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 33/44 (75%)
Query: 289 KGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGS 332
KG PDV +RL ++K+ L++P+ ALVD+DP+G +I+ +Y GS
Sbjct: 1 KGVPDVNSRLMVKKLWDTLQIPIFALVDADPHGFEIMCIYKYGS 44
>gi|331242402|ref|XP_003333847.1| hypothetical protein PGTG_15270 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312837|gb|EFP89428.1| hypothetical protein PGTG_15270 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 414
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 115/289 (39%), Gaps = 76/289 (26%)
Query: 155 VKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAA- 213
++++ L H L + RD++Y ++ LF Q + + +++ +A R+ L ++ +
Sbjct: 143 LQVMDLSHLAILEKTPILIRDVYYHNIPLFIKQVRVEEIVNHLAKTFEIERTHLYIVRSL 202
Query: 214 ---EKGVVV------------GRLIFSDNGDMIDCTKM--------GMGGKAIPPNIDRV 250
+K + GR IF +GD+ +K+ G + P ++ V
Sbjct: 203 NHFDKSCSITDEIVFYNQFAGGRGIF--HGDLKIVSKVKNDRVTVDGASISTLIPPMETV 260
Query: 251 GDM--QSDAMFILLVEKDAAYIRLAEDRFYNR---FPCIIVTAKGQPDVATRLFLRKMKM 305
++ + IL+VEK+A L + N PCI+++ KG PD+ATR K+
Sbjct: 261 KEVIPGQNVRMILIVEKEAVLSALVHNGINNHPDLSPCIVISGKGNPDLATRSLCYKLA- 319
Query: 306 ELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQ 365
SDP G+ + +++
Sbjct: 320 -----------SDP-------------------------------GLIQRRVPIFQVHRG 337
Query: 366 CRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSS 414
L MTE+D K KD++ + + + +E+ +V K K I ++S
Sbjct: 338 LLLEMTEKDFKVAKDIMSSE--RMSEAHKQEIRGLVTGKTKGSIAIINS 384
>gi|361125911|gb|EHK97930.1| putative Meiotic recombination protein rec12 [Glarea lozoyensis
74030]
Length = 181
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 150 KSTITVKILSLIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLN 209
K T ++IL L H+ + + TKRD++Y D +LF Q D +DD+A LG R +LN
Sbjct: 87 KFTALLRILELSHEALVTGVVTTKRDIYYRDPELFVKQAVVDRYVDDIAYTLGVERDALN 146
Query: 210 V 210
V
Sbjct: 147 V 147
>gi|342184364|emb|CCC93846.1| conserved hypothetical protein, partial [Trypanosoma congolense
IL3000]
Length = 319
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 33/153 (21%)
Query: 246 NIDRVGDMQSDAMFILLVEKDAAY------IRLAEDRFYNRFPCIIVTAKGQPDVATRLF 299
N VG S +++VEK++ I D+ ++ C+ + +KG P A+R F
Sbjct: 83 NFRVVGGRVSSMAAVVIVEKESTLKTLLTAISARGDKLFSD-QCVYLCSKGYPCRASRQF 141
Query: 300 LRKMKMEL-KLPVLALVDSDPYGLKI----LSVYG----C-GSKNMSYDSANL-----TT 344
L + EL ++P++ALVD DP+GL+I + ++G C G+ + + L +
Sbjct: 142 LHNLHHELPEVPIIALVDGDPHGLRIALTFMGLFGERPTCLGTSRVLRGNGELPGLLEPS 201
Query: 345 PD-----------IKWLGIRPSDLDKYKIPEQC 366
P I W+G+RPS + C
Sbjct: 202 PATAAAAVAALLPICWVGVRPSHVAHGSSGRAC 234
>gi|145967206|gb|ABP98995.1| meiotic transesterase, partial [Trichomonas vaginalis]
Length = 73
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 284 IIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLT 343
I++T +G PD TR F+R + L +P++ L D D YG+ I+ ++ GS + + D +
Sbjct: 9 ILITPRGVPDYNTRYFVRLLDDSLSIPIVGLFDGDAYGIFIMHLFKYGSMSAAQDGHAMA 68
Query: 344 TP 345
P
Sbjct: 69 CP 70
>gi|449019092|dbj|BAM82494.1| similar to DNA topoisomerase VI subunit A [Cyanidioschyzon merolae
strain 10D]
Length = 446
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 89/235 (37%), Gaps = 50/235 (21%)
Query: 174 RDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVV-------------- 219
R+LFY V +F Q + LD + +R SL +IA +G V
Sbjct: 87 RELFYRLVPVFDSQQELTQYLDRLLAAARISRFSLGIIAESRGWVFFGSGIQLQKRSIEN 146
Query: 220 --GRLIFSDNGDMIDCTKMGMGGKAIPPNIDR--------VGDMQSDAMFILLVEKDAAY 269
R + S+ + CT G IP +I V Q + IL+VEK +
Sbjct: 147 ERPRYVQSEAANARLCTPH-RGLMPIPDDIVLDPGAYQLVVEPRQDLVVVILIVEKFGVF 205
Query: 270 IRLAEDRFYNRFPC--IIVTAKGQPDVATRLFLRKMKMEL-----------------KLP 310
L ++ F + P I+VT GQP +ATR + ++ L +
Sbjct: 206 RCLVDEGFASILPVLTILVTGGGQPSLATRALVAQIARCLEAHHAAFRSTNAPHTYPRFD 265
Query: 311 VLALVDSDPYGLKILSVY----GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYK 361
+ + D DPYGL I Y + DS P +W+G R L + +
Sbjct: 266 IYVITDYDPYGLCIARQYRRSLAAALPQFTADSKFTRLP--RWIGPRACHLFRAR 318
>gi|449017249|dbj|BAM80651.1| similar to DNA topoisomerase VI subunit A [Cyanidioschyzon merolae
strain 10D]
Length = 446
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 89/235 (37%), Gaps = 50/235 (21%)
Query: 174 RDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVV-------------- 219
R+LFY V +F Q + LD + +R SL +IA +G V
Sbjct: 87 RELFYRLVPVFDSQQELTQYLDRLLAAARISRFSLGIIAESRGWVFFGSGIQLQKRSIEN 146
Query: 220 --GRLIFSDNGDMIDCTKMGMGGKAIPPNIDR--------VGDMQSDAMFILLVEKDAAY 269
R + S+ + CT G IP +I V Q + IL+VEK +
Sbjct: 147 ERPRYVQSEAANARLCTPH-RGLMPIPDDIVLDPGAYQLVVEPRQDLVVVILIVEKFGVF 205
Query: 270 IRLAEDRFYNRFPC--IIVTAKGQPDVATRLFLRKMKMEL-----------------KLP 310
L ++ F + P I+VT GQP +ATR + ++ L +
Sbjct: 206 RCLVDEGFASILPVLTILVTGGGQPSLATRALVAQIARCLEAHHAAFRSTNAPHTYPRFD 265
Query: 311 VLALVDSDPYGLKILSVY----GCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYK 361
+ + D DPYGL I Y + DS P +W+G R L + +
Sbjct: 266 IYVITDYDPYGLCIARQYRRSLAAALPQFTADSKFTRLP--RWIGPRACHLFRAR 318
>gi|154313143|ref|XP_001555898.1| hypothetical protein BC1G_05573 [Botryotinia fuckeliana B05.10]
Length = 107
Score = 49.3 bits (116), Expect = 0.004, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 325 LSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEE 384
+S Y GS +++++ L+ P + WLG+R D+ + + L +TE+D + +L+
Sbjct: 1 MSTYKHGSVALAHENEGLSVPFMHWLGLRSKDMMQGGKENEGLLKLTERDRRLAVKMLQR 60
Query: 385 DFVKK---NPGWVEELNLMVKTKQKAEIQALSS 414
D ++ W E+ +M+ +KAEIQ + +
Sbjct: 61 DLCQEYGDEHEWRREIQVMLMLNKKAEIQIIGN 93
>gi|449470594|ref|XP_004153001.1| PREDICTED: meiotic recombination protein SPO11-1-like [Cucumis
sativus]
Length = 150
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 160 LIHQLCLRNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAE 214
+I QL N H +KRD++Y +F DQ+ D ++D+ +L C+R +LNV+ E
Sbjct: 85 IIQQLLGENRHSSKRDIYYMHPSIFTDQSVVDRAINDICILLQCSRHNLNVVGDE 139
>gi|70951181|ref|XP_744852.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56524972|emb|CAH80607.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 185
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 79/165 (47%), Gaps = 27/165 (16%)
Query: 259 FILLVEKDAAYIRLAEDRFYNRF-PCIIVTAKGQPDVATRLFLRKM-KMELKLPVLALVD 316
++L++EK+ + +L + F ++ P I++TAKG PD+ TR + ++ K L L D
Sbjct: 24 YVLIIEKETVFFKLLQSNFIFKYGPLILITAKGFPDINTRQLIYEIQKKNSTLKFFCLTD 83
Query: 317 SDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIK 376
D Y + +S+ N+ + S I+ ++ SD K ++ +DI+
Sbjct: 84 YDAYDMDDISI-----NNLQWISIFTPEEGIRKKALKESDFSK----------LSLKDIR 128
Query: 377 TGKDLLEEDFVKKNPG--------WVEELNLMVKTKQKAEIQALS 413
++ + +K N W+E+++ M K+ K EI A++
Sbjct: 129 IMDNICTK--LKNNNKFGASETNRWIEQVDNMKKSGIKYEIDAIA 171
>gi|401420280|ref|XP_003874629.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490865|emb|CBZ26129.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 493
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 90/190 (47%), Gaps = 29/190 (15%)
Query: 204 TRSSLNVIAAEKGVVVGRLIF--SDNGDMIDCTKMGMGGKAIPPNIDR--VGDMQSD--- 256
TR SL + AA K ++ G + D ++ID + G G + ++ VG ++D
Sbjct: 172 TRESLGITAAGKSLLAGAITLELCDPAELIDVSARGSSGITLTYSLAARMVGCREADDWQ 231
Query: 257 ----------AMFILLVEKDAAYI----RLAEDRFYNRFPCIIVTAKGQPDVATRLFLRK 302
+ ++L+EK++ + +A+ + + CI++ KG P VA R +L +
Sbjct: 232 AARDGISLSRSYKLVLIEKESVHHAVLQSIAKSGSPHTYSCILLCTKGYPCVAAREWLHR 291
Query: 303 MK-MELKLPVLALVDSDPYGLKI-LSVYG-CGSKNM-SYDSANLTTPDIKWL----GIRP 354
+ + L + +VD DP+GL I L+V G GSK S +++ TP + G P
Sbjct: 292 VHALWPALQLYIMVDGDPHGLCIALTVMGLLGSKEYPSPIASSQPTPTLSSFSSLSGATP 351
Query: 355 SDLDKYKIPE 364
+ + K+ E
Sbjct: 352 ASAETAKVKE 361
>gi|444314273|ref|XP_004177794.1| hypothetical protein TBLA_0A04820 [Tetrapisispora blattae CBS 6284]
gi|387510833|emb|CCH58275.1| hypothetical protein TBLA_0A04820 [Tetrapisispora blattae CBS 6284]
Length = 387
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 116/267 (43%), Gaps = 32/267 (11%)
Query: 172 TKRDLFYTDVKLFQDQTQSDAVLDDVACILGC-TRSSLNVIAAEKGVVVGRLIFSDNGDM 230
T RD+FY + ++++ Q + L+ + ++ LN++AA+KG+ +F +
Sbjct: 121 TIRDVFYDNKEIYRTQRSVENGLEIIQKTFSLPSKDMLNIVAAQKGLCFSP-VFIEVSTS 179
Query: 231 IDCTKMGMGGKAIPPNIDRVGDMQSDAM----FILLVEKDAAYIRLAEDRFYNRFP-CII 285
+M + P ++ ++ + I+++EK+A + L + + II
Sbjct: 180 GKTEQMNDLSTQLIPYMNSKSSVKLNTAEKIKRIVVLEKEAVFNSLGKYIQERKIQDTII 239
Query: 286 VTAKGQPDVATRLFL----RKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSAN 341
+T KG PD TR FL R ++ L D+DP+G+ I C S S +
Sbjct: 240 ITGKGYPDTLTRTFLEVLQRSNASYEQISWTILTDADPHGIDI----ACKYLTSSSSSID 295
Query: 342 LTTPDIKWLGIRPSDLDKYKIPEQCR----LPMTEQDIKTGKDLLEE-----------DF 386
+ T + + GI + L K + LP++ D +LL + +
Sbjct: 296 VATQKLSYRGIFITHLIISKFKDTSNSIQFLPLSALDSIVAMNLLAKLVDDSSSKEVIHY 355
Query: 387 VKKNPGWVEELNLMVKTKQKAEIQALS 413
K+N V EL + + ++KAE+ ++
Sbjct: 356 SKRN--LVRELQVQLFFQKKAEMNGMT 380
>gi|448521811|ref|XP_003868575.1| Spo11 DNA endonuclease [Candida orthopsilosis Co 90-125]
gi|380352915|emb|CCG25671.1| Spo11 DNA endonuclease [Candida orthopsilosis]
Length = 281
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 39/195 (20%)
Query: 172 TKRDLFYTDVKLF-QDQTQSDAVLDD-VACILGCTRS-SLNVIAAEKGVVVGRLIFSDNG 228
T RD++Y DV++F +DQ + +L D V LG + + N+ +KG++ G IF
Sbjct: 37 TVRDIYYQDVEIFNRDQQECRKLLTDLVEDGLGWSLARDFNIHPTQKGLMYGN-IFKQMA 95
Query: 229 DMI-----DCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVEKDAA------YIRLAEDRF 277
+ I C+ +P A+ ++++EKDA +I D
Sbjct: 96 EPILIPIDYCSYFKWNSTILP----------GTALLVIVLEKDAVLHSFSKFIETKSDAL 145
Query: 278 YNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSY 337
+ I++T KG D T+ F + L DSD +G+ I Y
Sbjct: 146 HRNL--IVITGKGFSDNLTQRFASWLTKTYHTTTLGFFDSDSHGILI------------Y 191
Query: 338 DSANLTTPDIKWLGI 352
+ PDI++ G+
Sbjct: 192 KQFKFSIPDIEYTGM 206
>gi|475130|gb|AAA35332.1| rec12 [Schizosaccharomyces pombe]
Length = 139
Score = 47.0 bits (110), Expect = 0.020, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
Query: 296 TRLFLRKMKMEL-KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRP 354
TR FL K+ L + D DP+GL I S + GS S++ + +++ LG P
Sbjct: 2 TRKFLVKLAKALPDAKFFGIFDWDPHGLCIYSCFKYGSNAYSHEPHS-QLRNLQLLG--P 58
Query: 355 SDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSS 414
D + ++ L + ++DIK LL+ + +K P E+L M+ ++KAEIQA+
Sbjct: 59 LYEDIFNKNQEFSLKLNKRDIKMITTLLQFEGFQKEPVVREQLQRMLFIQKKAEIQAILE 118
Query: 415 F 415
F
Sbjct: 119 F 119
>gi|40539001|gb|AAR87258.1| putative DNA topoisomerase (with alternative splicing) [Oryza
sativa Japonica Group]
Length = 161
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 170 HVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKG 216
H +KRD++Y +FQ+Q D ++D+ + C+R +LNV+ KG
Sbjct: 115 HCSKRDIYYMYPSIFQEQAVVDRAINDICVLFKCSRHNLNVVPVAKG 161
>gi|126466039|ref|YP_001041148.1| type II DNA topoisomerase VI subunit a [Staphylothermus marinus F1]
gi|126014862|gb|ABN70240.1| type II DNA topoisomerase VI subunit a [Staphylothermus marinus F1]
Length = 75
Score = 46.2 bits (108), Expect = 0.034, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 389 KNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+ P W+ EL + KT K EI+A++S G ++L++ Y+P K+ DW+
Sbjct: 28 RTPEWIRELCIFFKTLSKLEIEAMASKGLKFLADKYIPEKINIGDWI 74
>gi|398024492|ref|XP_003865407.1| hypothetical protein, conserved [Leishmania donovani]
gi|322503644|emb|CBZ38730.1| hypothetical protein, conserved [Leishmania donovani]
Length = 533
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 24/155 (15%)
Query: 204 TRSSLNVIAAEKGVVVGRLIF--SDNGDMIDCTKMGMGGKAIPPNID------------- 248
TR SL + AA K ++ G + D ++ID + G G + ++
Sbjct: 212 TRESLGITAAGKSLLAGAITLELCDPVELIDVSARGSAGITLTYSLATRMVGCREAGVWQ 271
Query: 249 --RVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFP----CIIVTAKGQPDVATRLFLRK 302
R G S ++L+EK++ + + + + P CI++ KG P VA R +LR+
Sbjct: 272 AARDGISSSRPYRLVLIEKESVHHAVLQSMTKSGTPHTYSCILLCTKGYPCVAAREWLRR 331
Query: 303 MK-MELKLPVLALVDSDPYGLKI-LSVYG-CGSKN 334
+ + L + +VD DP GL I L+V G GSK
Sbjct: 332 VHALRPALQLYIMVDGDPDGLGIALTVMGLLGSKG 366
>gi|219362369|ref|NP_001136603.1| uncharacterized protein LOC100216726 [Zea mays]
gi|194696330|gb|ACF82249.1| unknown [Zea mays]
Length = 184
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 156 KILSLIHQLCLRNIHVTKRDLFYTDV----KLFQDQTQSDAVLDDVACILGCTRSSLNVI 211
K++ + +++ V +R+LFY + K F Q + + DV +L CTR SL V+
Sbjct: 101 KVMEMCYKILGEGKLVQQRELFYKLLSDSPKYFSCQRHVNQAIQDVVSLLRCTRQSLGVM 160
Query: 212 AAEKGVVVGRLIF 224
A+ +G ++GRL+
Sbjct: 161 ASSRGALIGRLVL 173
>gi|154345964|ref|XP_001568919.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066261|emb|CAM44052.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 526
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 24/155 (15%)
Query: 204 TRSSLNVIAAEKGVVVGRLIF--SDNGDMIDCTKMGMGG---------------KAIPPN 246
TR SL + AA K ++ G LI D ++ID + G G +A
Sbjct: 206 TRESLGITAAGKSLLAGALILELCDPVELIDVSARGSSGITLTYPLATRMVGCREASGWQ 265
Query: 247 IDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFP----CIIVTAKGQPDVATRLFLRK 302
R G S ++L+EK+ + + + + P +++ KG P VATR +LR+
Sbjct: 266 AARNGISLSRPCKLVLIEKEGIHHAVLQSMMKSDTPQTHSYVLLCTKGYPCVATRQWLRR 325
Query: 303 MK-MELKLPVLALVDSDPYGLKI-LSVYG-CGSKN 334
+ L +VD DP+GL I L+V G GSK
Sbjct: 326 AHALWPALQFYVMVDGDPHGLCIALTVMGLLGSKG 360
>gi|146102960|ref|XP_001469454.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134073824|emb|CAM72563.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 533
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 24/155 (15%)
Query: 204 TRSSLNVIAAEKGVVVGRLIF--SDNGDMIDCTKMGMGGKAIPPNID------------- 248
TR SL + AA K ++ G + D ++ID + G G + ++
Sbjct: 212 TRESLGITAAGKSLLAGAITLELCDPVELIDVSARGSAGITLTYSLATRMVGCREAGVWQ 271
Query: 249 --RVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFP----CIIVTAKGQPDVATRLFLRK 302
R G S ++L+EK++ + + + + P CI++ KG P VA R +LR+
Sbjct: 272 AARDGISSSRPYKLVLIEKESVHHAVLQSMTKSGTPHTYSCILLCTKGYPCVAAREWLRR 331
Query: 303 MK-MELKLPVLALVDSDPYGLKI-LSVYG-CGSKN 334
+ + L + +VD DP GL I L+V G GSK
Sbjct: 332 VHALRPALQLYIMVDGDPDGLGIALTVMGLLGSKG 366
>gi|396498159|ref|XP_003845151.1| hypothetical protein LEMA_P004590.1 [Leptosphaeria maculans JN3]
gi|312221732|emb|CBY01672.1| hypothetical protein LEMA_P004590.1 [Leptosphaeria maculans JN3]
Length = 164
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 20/125 (16%)
Query: 311 VLALVDSDPYGLKILSVYGCGSKNMSY------DSANLTTPDIKWLGIRPSDLDKYKIPE 364
+ AL+D DP G+ I+S Y GS +++ D L+ P+I+WLG++ + + + E
Sbjct: 1 MYALMDLDPDGIAIMSTYKYGSYRLAHEDVTTNDRPGLSLPNIRWLGVKAHQISRTPVGE 60
Query: 365 -----------QCRLPMTEQDIKTGKDLLEEDFVKKNP---GWVEELNLMVKTKQKAEIQ 410
Q + +T +D +LE D + W L M+ KAE+Q
Sbjct: 61 SDTGTGAIPRLQGVMKLTWRDRGKAMRMLEWDLCADDGPEQEWRGALQSMLMLNGKAEMQ 120
Query: 411 ALSSF 415
L
Sbjct: 121 ILDEL 125
>gi|157877047|ref|XP_001686856.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68129931|emb|CAJ09238.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 490
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 35/155 (22%)
Query: 204 TRSSLNVIAAEKGVVVGR-----------------------LIFSDNGDMIDCTKMGMGG 240
TR SL + AA K ++ G L +S M+ C + G+
Sbjct: 169 TRESLGITAAGKSLLAGAITLELCDPVELIDVSAHGSVGITLTYSLAARMVGCRETGVWQ 228
Query: 241 KAIPPNIDRVGDMQSDAMFILLVEKDAAYIRLAEDRFYNRFP----CIIVTAKGQPDVAT 296
A R G S ++L+EK++ + + + + P I++ KG P VA
Sbjct: 229 AA------RNGISSSRPYKLVLIEKESVHHAVLQSMMKSGTPRTYSWILLCTKGYPCVAA 282
Query: 297 RLFLRKMK-MELKLPVLALVDSDPYGLKI-LSVYG 329
R +LR++ ++ L + +VD DP+GL I L+V G
Sbjct: 283 REWLRRVHALQPALQLYIMVDGDPHGLDIALTVMG 317
>gi|359417134|ref|ZP_09209343.1| DNA topoisomerase VI subunit A [Candidatus Haloredivivus sp. G17]
gi|358032510|gb|EHK01206.1| DNA topoisomerase VI subunit A [Candidatus Haloredivivus sp. G17]
Length = 106
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 180 DVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMG 239
D F+DQ +S+ V+ D+ G R L++ A KG + G + +D+GD ID MG+
Sbjct: 37 DENTFEDQDESNNVVVDIETATGAIREDLHLFAEPKGRLFGPIKINDSGDTIDGMSMGLP 96
Query: 240 GKAIP 244
IP
Sbjct: 97 FLLIP 101
>gi|399216365|emb|CCF73053.1| unnamed protein product [Babesia microti strain RI]
Length = 166
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 29/168 (17%)
Query: 123 LYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTK-RDLFYTDV 181
+Y+ E +L + + +L+ RKS I +I+ +C++ +T R L+Y
Sbjct: 10 IYIYEFITTLLSEDGQMDNLHTLA--RKSCIIKQII-----ICMKRDSITSLRQLYYNSP 62
Query: 182 KLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGK 241
+F++QTQS+ +L + + TR L++ A+EKG++ + I +N + + K
Sbjct: 63 LVFKNQTQSNKILGLITKEIELTREQLHIHASEKGLIASKHIKINN--------LKVNHK 114
Query: 242 AIPPNIDRVGD------------MQSDAMFILLVEKDAAYIRLAEDRF 277
I D +GD + S F+L+VEK+ + + F
Sbjct: 115 NIYIQSD-IGDKYYVILNGVKPLVLSKLKFVLIVEKETIFKQFVTSNF 161
>gi|359417675|ref|ZP_09209767.1| DNA topoisomerase VI subunit A, partial [Candidatus Haloredivivus
sp. G17]
gi|358031969|gb|EHK00781.1| DNA topoisomerase VI subunit A [Candidatus Haloredivivus sp. G17]
Length = 139
Score = 43.9 bits (102), Expect = 0.17, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 58/110 (52%), Gaps = 13/110 (11%)
Query: 336 SYDSANLTTPDIKWLGIRPSDLDKYKI----------PEQCRLPMTEQDIKTGKDLLEED 385
S + + TPD K +G+ D+++Y + PE P +D K D+++ +
Sbjct: 32 SXNPIDXXTPDAKLIGMTMEDIEEYGLEHVTEDLKGKPEDSGGPT--KDYKRIHDVMDYE 89
Query: 386 FVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 435
+++K W ++L LM+ + E QAL++ ++++ YLP K++ + +L
Sbjct: 90 WMQKKE-WQKQLELMLDKGVRVEQQALAANSLEFVANEYLPEKIENETFL 138
>gi|242208773|ref|XP_002470236.1| predicted protein [Postia placenta Mad-698-R]
gi|220730686|gb|EED84539.1| predicted protein [Postia placenta Mad-698-R]
Length = 128
Score = 42.0 bits (97), Expect = 0.54, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 335 MSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWV 394
M +++ L IKWLGI ++L + + +P+ + D K +L + K W
Sbjct: 1 MQHENERLVARKIKWLGIYTTELAGIGLSKDELIPINKHDEKKALTMLRRPNLPKR--WR 58
Query: 395 EELNLMVKTKQKAEIQALS 413
+EL M+ ++KAEI+ LS
Sbjct: 59 KELQHMLHNRRKAEIEVLS 77
>gi|150865082|ref|XP_001384151.2| hypothetical protein PICST_31531 [Scheffersomyces stipitis CBS
6054]
gi|149386338|gb|ABN66122.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 414
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 18/208 (8%)
Query: 139 LRPFA-SLSTVRKSTITVKILSLIHQLCLRNIH--VTKRDLFYTDVKLFQ-DQTQSDAVL 194
LR FA S V++ T T+K+L ++ N T RD++Y DV+ F Q + +L
Sbjct: 101 LRQFADSDILVQRFTATLKVLKILLLQAQSNSKKSTTIRDIYYQDVEAFHWKQRYCNEIL 160
Query: 195 DDVAC-ILGCT-RSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPN--IDRV 250
+ LG + + ++ ++KG+V G N I IP + + +
Sbjct: 161 HSIVVDSLGLSLEHNFSIYPSQKGLVYGDFAIQSNEGTIFQMSYSEEPVLIPLHTKFEHI 220
Query: 251 GDMQSDAMFILLVEKDAA------YIRLAEDRFYNRFP--CIIVTAKGQPDVATRLFLRK 302
+ I+++EK+A YI+ N P I+VT KG PD T+ F+
Sbjct: 221 LPNEESHYAIVILEKEAVFQSFCYYIKTRYTLKDNFVPDNLIVVTGKGFPDNLTKKFVNI 280
Query: 303 MKME--LKLPVLALVDSDPYGLKILSVY 328
+ L DSD YG+ I Y
Sbjct: 281 LANTAFTNSVTLGFFDSDVYGINICKNY 308
>gi|84996689|ref|XP_953066.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65304062|emb|CAI76441.1| hypothetical protein, conserved [Theileria annulata]
Length = 334
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 117/283 (41%), Gaps = 32/283 (11%)
Query: 157 ILSLIHQLCLRNIH----VTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIA 212
IL L H LRN+ ++ R ++Y +FQ Q S+ + ++ +R L +I+
Sbjct: 36 ILVLFH--ILRNLRSGTAISLRGIYYNCAHIFQSQQDSNQTIAEITQRTRLSRKDLLIIS 93
Query: 213 AEKGVVVGRLIFSD--------NGDMIDCTKMGMGGKAIPPNIDRVGDMQSDAMFILLVE 264
K ++ G L S+ N + I ++ + + + + + G ++ +++
Sbjct: 94 CPKSLIKGHLTISEIFNQHQIINSNCISIFQI-VEKETVYHRLLKFGLIERLNKLNIIIN 152
Query: 265 KDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKM--KMELKLPVLALVDSDPYGL 322
D +++L + FP D TR + K+ K + P + L D +P GL
Sbjct: 153 IDINHVQLYFLEDFQVFPSNFTLL----DYCTRELVHKIYQKSNNQFPFIILTDINPSGL 208
Query: 323 KILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLL 382
I + G + +SY ++ W+ R + +I + +T +D++ ++L+
Sbjct: 209 NISLNFFRGPRKLSYYFPECGIENLYWMYFRSEE----RIS-GIKSVLTSRDLRIIENLI 263
Query: 383 -----EEDFVKKNPGWVEELNLMVKTKQKAEI-QALSSFGFQY 419
E F N W+ ++ K +I + S GF Y
Sbjct: 264 YELESENIFKNNNLEWIPNTPNLIHLKNTRKILEKFISEGFTY 306
>gi|255725400|ref|XP_002547629.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135520|gb|EER35074.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 199
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 257 AMFILLVEKDAAYIRLAEDRFYNRFPCI-----IVTAKGQPDVATRLFLRKMKMELKLPV 311
++ +++VEKD+ + L + +R + +VT KG D T FL ++ + +
Sbjct: 30 SLIVIIVEKDSVFQYLCS--YLSRHKSLLSNFLVVTGKGYSDGLTLRFLAWLQDKFQASF 87
Query: 312 LALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPD-IKWLGIRPSDL 357
L DSD YG+ I Y K + Y L D WL I D+
Sbjct: 88 LGFFDSDVYGINIYKQYHRKLKIVHYCGTYLMDSDPSSWLSISARDI 134
>gi|167518089|ref|XP_001743385.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778484|gb|EDQ92099.1| predicted protein [Monosiga brevicollis MX1]
Length = 930
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 146/370 (39%), Gaps = 81/370 (21%)
Query: 83 DLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASSNQLYVPELDRIVLKDKTTLR-P 141
++ L ++ ++ L+ ++ ++AG+ F++PS + DK R
Sbjct: 617 NVGLRELRRRLDELMNKLLHQLVAGDSPHFRLPSHVRFD------------ADKGYYRLT 664
Query: 142 FASLSTVRKSTITVK-ILSLIHQL-CLRNIHVTK--RDLFYTDVKLFQDQTQSDAVLDDV 197
AS VR + + IL L ++ L H ++ RD+FY F+ Q + L D+
Sbjct: 665 TASHLMVRSQSPRFEYILRLCQEMYALIGTHSSRTVRDIFYNGRSSFRTQHDAQQALLDI 724
Query: 198 ACILGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDA 257
+ +L + +L V A+ KG+V G + D+ MG + I R SD
Sbjct: 725 STLLCVRQEALPVFASNKGLVCGDITLLDS--------MGRTLISREQAISR-----SDN 771
Query: 258 MFILLVEKDAAYIRLAEDRFYNRFPCI-----------IVTAKGQPDVATRLFLRKMKME 306
+ L KD I LA + + I TA+ ATR + +M
Sbjct: 772 LIPSLRAKDTRRIPLAS--LFENYAHSCSSHCSYSAMPIHTAQRFKPAATRSWRARM--- 826
Query: 307 LKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLD-----KYK 361
P G S +G LT P + +G + S L ++
Sbjct: 827 ------------PVG----SAFGL-----------LTLPAVATIGRQVSILTGFNTLRFD 859
Query: 362 IPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLS 421
+ C LP D + LL + +P L M + KAE++A++ ++LS
Sbjct: 860 LKAAC-LPQEGNDFNLLERLLAHPAL--HPKERAGLQEMATARTKAELEAINVHHPRFLS 916
Query: 422 EVYLPLKLQQ 431
+ YLP+K+++
Sbjct: 917 DRYLPIKVRE 926
>gi|260893225|ref|YP_003239322.1| ATP-binding region ATPase domain-containing protein [Ammonifex
degensii KC4]
gi|260865366|gb|ACX52472.1| ATP-binding region ATPase domain protein [Ammonifex degensii KC4]
Length = 882
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%)
Query: 260 ILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDP 319
IL VEK + L R R+ +V A+G A R+ R+ + + + L D+DP
Sbjct: 606 ILYVEKKGLWPVLQAARLAERYDMAVVAAEGYATQAARVLFRRAERNREYRLFVLHDADP 665
Query: 320 YGLKI 324
YG I
Sbjct: 666 YGYNI 670
>gi|70944412|ref|XP_742140.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56520951|emb|CAH81729.1| hypothetical protein PC000785.04.0 [Plasmodium chabaudi chabaudi]
Length = 118
Score = 38.9 bits (89), Expect = 4.6, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 168 NIHVTKRDLFYTDVKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLIFSD 226
NI+ T R +FYT+ +LF Q S+ + + I+ R LN+ + KG++ G L+ +
Sbjct: 56 NIYTTLRQIFYTNPQLFISQNISNRTIGKLTQIIKKPREILNIYNSPKGIIRGNLLLKE 114
>gi|251780257|ref|ZP_04823177.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243084572|gb|EES50462.1| RelA/SpoT family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 728
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 339 SANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVE 395
S+N P++ WL I S+ K KI + + E++I GKDLLE++ K+ +V+
Sbjct: 449 SSNSKGPNMDWLNIAKSNQSKSKIKQWFKKAKKEENILKGKDLLEKELKKQGVNFVD 505
>gi|188588536|ref|YP_001920360.1| GTP pyrophosphokinase [Clostridium botulinum E3 str. Alaska E43]
gi|188498817|gb|ACD51953.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum E3 str.
Alaska E43]
Length = 728
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 339 SANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVE 395
S+N P++ WL I S+ K KI + + E++I GKDLLE++ K+ +V+
Sbjct: 449 SSNSKGPNMDWLNIAKSNQSKSKIKQWFKKAKKEENILKGKDLLEKELKKQGVNFVD 505
>gi|149240285|ref|XP_001526018.1| hypothetical protein LELG_02576 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450141|gb|EDK44397.1| hypothetical protein LELG_02576 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 215
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 260 ILLVEKDAAY----IRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMK-MELKLPVLAL 314
+ + EKDA + LA +F IIVTAKG D T FL+ ++ K +
Sbjct: 54 VAIFEKDAVFESFCKHLANGKFKFSTRLIIVTAKGYADSLTLAFLKWIQSKHTKCTFIGF 113
Query: 315 VDSDPYGLKILSVY 328
D+D YG+ I Y
Sbjct: 114 FDADVYGVNIYQQY 127
>gi|444708696|gb|ELW49743.1| DNA-directed RNA polymerase III subunit RPC3 [Tupaia chinensis]
Length = 628
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 18/151 (11%)
Query: 203 CTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGK-----AIPPNIDRVGDMQSDA 257
C R L ++ + + + ++SD G++I ++ + GK + DR+ + D+
Sbjct: 173 CGRM-LRMLRYPRYIYTTKTLYSDTGELI-VEELLLNGKMTMSAVVKKVADRLTETMEDS 230
Query: 258 MFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDS 317
+ E ++RLA+ F R P + T K +P L P L + +
Sbjct: 231 KTMDYAEVSNTFVRLADTHFVQRCPLVPATEKSEPGPP-----------LPAPTLVINEK 279
Query: 318 DPYGLKILSVYGCGSKNMSYDSANLTTPDIK 348
D Y + LS+ G G + S + P K
Sbjct: 280 DMYLVPKLSLIGKGKRRRSSEEDAAGEPKAK 310
>gi|187932883|ref|YP_001885230.1| GTP pyrophosphokinase [Clostridium botulinum B str. Eklund 17B]
gi|187721036|gb|ACD22257.1| RelA/SpoT family protein [Clostridium botulinum B str. Eklund 17B]
Length = 728
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 339 SANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVE 395
S+N P++ WL + S+ K KI + + E++I GKDLLE++ K+ +V+
Sbjct: 449 SSNSKGPNMDWLNVAKSNQSKSKIKQWFKKAKKEENILKGKDLLEKELKKQGVNFVD 505
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,286,764,508
Number of Sequences: 23463169
Number of extensions: 247942943
Number of successful extensions: 770039
Number of sequences better than 100.0: 830
Number of HSP's better than 100.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 141
Number of HSP's that attempted gapping in prelim test: 767617
Number of HSP's gapped (non-prelim): 1117
length of query: 435
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 290
effective length of database: 8,957,035,862
effective search space: 2597540399980
effective search space used: 2597540399980
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)