Query 040795
Match_columns 114
No_of_seqs 124 out of 1087
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 19:19:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040795.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040795hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w9y_A 1-aminocyclopropane-1-c 100.0 3.9E-37 1.3E-41 233.8 8.2 110 1-110 194-307 (319)
2 1gp6_A Leucoanthocyanidin diox 100.0 4.4E-36 1.5E-40 230.8 10.3 102 1-102 248-350 (356)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 3.3E-35 1.1E-39 222.3 10.1 96 1-96 207-308 (312)
4 1odm_A Isopenicillin N synthas 100.0 2E-33 6.9E-38 214.1 10.5 95 1-98 230-325 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 4.9E-34 1.7E-38 216.0 6.2 97 2-99 204-307 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 7.1E-30 2.4E-34 190.8 8.2 82 1-96 190-276 (280)
7 2rg4_A Uncharacterized protein 91.6 0.3 1E-05 34.5 5.0 43 8-62 166-209 (216)
8 2hbt_A EGL nine homolog 1; pro 76.3 2.6 9E-05 30.1 3.8 40 9-59 173-212 (247)
9 3dkq_A PKHD-type hydroxylase S 59.1 14 0.00047 26.4 4.5 38 10-59 157-194 (243)
10 2ww6_A Fibritin, T4 fibritin; 47.5 13 0.00046 17.6 1.9 12 3-14 13-24 (27)
11 3s57_A Alpha-ketoglutarate-dep 43.3 23 0.00078 24.4 3.4 43 9-57 158-200 (204)
12 2vf9_A Coat protein; virion, R 42.3 7.3 0.00025 24.4 0.6 18 28-45 49-66 (131)
13 2iuw_A Alkylated repair protei 40.5 31 0.0011 24.2 3.9 45 8-58 184-228 (238)
14 3tht_A Alkylated DNA repair pr 36.3 38 0.0013 25.4 3.9 56 7-62 242-315 (345)
15 2jig_A Prolyl-4 hydroxylase; h 31.8 39 0.0013 23.1 3.2 47 10-60 170-217 (224)
16 3dl3_A Tellurite resistance pr 29.2 44 0.0015 21.4 2.8 56 7-63 36-103 (119)
17 2opw_A Phyhd1 protein; double- 25.4 1.7E+02 0.0059 20.3 6.2 50 9-70 226-276 (291)
18 2a1x_A Phytanoyl-COA dioxygena 21.7 1.6E+02 0.0056 20.7 5.1 48 8-68 213-261 (308)
19 2fct_A Syringomycin biosynthes 21.2 1.3E+02 0.0044 21.3 4.4 45 9-65 218-265 (313)
20 3i3q_A Alpha-ketoglutarate-dep 20.1 1.5E+02 0.0052 20.4 4.4 42 8-58 153-201 (211)
No 1
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=3.9e-37 Score=233.81 Aligned_cols=110 Identities=37% Similarity=0.702 Sum_probs=98.1
Q ss_pred CceEEECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCCCC---C
Q 040795 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPK---T 77 (114)
Q Consensus 1 GLqv~~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~~---~ 77 (114)
||||+++|+|++|+|.+|++|||+||+||+||||+|||+.|||+.++.++|||++||++|+.|++|+|++++++++ +
T Consensus 194 GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~ 273 (319)
T 1w9y_A 194 GLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEEN 273 (319)
T ss_dssp CEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC-------
T ss_pred eeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecccceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccC
Confidence 8999999999999999999999999999999999999999999999889999999999999999999999999987 5
Q ss_pred CCCCCceeHHHHHHHHHhcccCCccc-cceeecc
Q 040795 78 PALFKKINVVDYFKRFFSTELRGKSF-IDFLKIQ 110 (114)
Q Consensus 78 p~~y~~~~~~e~~~~~~~~~~~~~~~-~~~~~~~ 110 (114)
|++|++++++||+..+++..+.++.. ++.+|+.
T Consensus 274 p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~~ 307 (319)
T 1w9y_A 274 KQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAM 307 (319)
T ss_dssp -CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHHC
T ss_pred ccccCcEeHHHHHHHHHhhhcCcchhHHHHHHHH
Confidence 99999999999999999888877654 5666654
No 2
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=4.4e-36 Score=230.82 Aligned_cols=102 Identities=38% Similarity=0.646 Sum_probs=97.3
Q ss_pred CceEEECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCe-EEecCCCCCCCCCCC
Q 040795 1 GLQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDG-ELGPAPSLITPKTPA 79 (114)
Q Consensus 1 GLqv~~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~-~i~pl~~~~~~~~p~ 79 (114)
||||+++|+|++|+|.+|++|||+||+||+||||+|||+.|||+.+...+|||++||++|+.|+ +|+|+++++++++|+
T Consensus 248 GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~~~~~p~ 327 (356)
T 1gp6_A 248 GLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPA 327 (356)
T ss_dssp CEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCC
T ss_pred CeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhcCCCCCc
Confidence 8999999999999999999999999999999999999999999999889999999999999999 999999999999999
Q ss_pred CCCceeHHHHHHHHHhcccCCcc
Q 040795 80 LFKKINVVDYFKRFFSTELRGKS 102 (114)
Q Consensus 80 ~y~~~~~~e~~~~~~~~~~~~~~ 102 (114)
+|++++++||+..++...++++.
T Consensus 328 ~y~~~t~~eyl~~~~~~~~d~~~ 350 (356)
T 1gp6_A 328 KFPPRTFAQHIEHKLFGKEQEEL 350 (356)
T ss_dssp SSCCEEHHHHHHHHHHHHHHHHC
T ss_pred cCCCccHHHHHHHHHHhccCcch
Confidence 99999999999999888765543
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=3.3e-35 Score=222.27 Aligned_cols=96 Identities=28% Similarity=0.500 Sum_probs=90.9
Q ss_pred CceEE-ECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCC----CCceeEEEEeeCCCCCeEEecCCCCCCC
Q 040795 1 GLQIK-KDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNS----VKERLSFATFYNPKLDGELGPAPSLITP 75 (114)
Q Consensus 1 GLqv~-~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~----~~~R~S~~~F~~p~~d~~i~pl~~~~~~ 75 (114)
||||+ ++|+|++|+|.+|++|||+||+||+||||+|+|+.|||+.++ ..+|||++||++|+.|++|+|+++++++
T Consensus 207 GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~ 286 (312)
T 3oox_A 207 GLEVLDRDGQWLPINPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTA 286 (312)
T ss_dssp CEEEECTTSCEEECCCCSSCEEEEECHHHHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCS
T ss_pred ceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCC
Confidence 89998 789999999999999999999999999999999999998763 4679999999999999999999999999
Q ss_pred CCCCCCC-ceeHHHHHHHHHhc
Q 040795 76 KTPALFK-KINVVDYFKRFFST 96 (114)
Q Consensus 76 ~~p~~y~-~~~~~e~~~~~~~~ 96 (114)
++|++|+ +++++||+..+++.
T Consensus 287 ~~p~~y~~~~t~~eyl~~r~~~ 308 (312)
T 3oox_A 287 ENPDRYPESITADEFLQQRLRE 308 (312)
T ss_dssp SSCCSCSSCEEHHHHHHHHHHH
T ss_pred CCcccCCCCeeHHHHHHHHHHH
Confidence 9999999 99999999998874
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=2e-33 Score=214.08 Aligned_cols=95 Identities=20% Similarity=0.293 Sum_probs=89.6
Q ss_pred CceEE-ECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeCCCCCeEEecCCCCCCCCCCC
Q 040795 1 GLQIK-KDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYNPKLDGELGPAPSLITPKTPA 79 (114)
Q Consensus 1 GLqv~-~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~p~~d~~i~pl~~~~~~~~p~ 79 (114)
||||+ ++| |++|+|.+|++|||+||+||+||||+|||+.|||+. +..+|||++||++|+.|++|+|+++++++++ +
T Consensus 230 GLQV~~~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~-~~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~ 306 (331)
T 1odm_A 230 NLQVETAAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKW-VNAERQSLPFFVNLGYDSVIDPFDPREPNGK-S 306 (331)
T ss_dssp CEEEEETTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEEC-CCSCEEEEEEEECCCTTCBCCCCCTTSTTCC-C
T ss_pred CEEEEcCCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCC-CCCCEEEEEEEEcCCCCCEEeCCCccccccc-c
Confidence 89999 788 999999999999999999999999999999999985 4789999999999999999999999998877 8
Q ss_pred CCCceeHHHHHHHHHhccc
Q 040795 80 LFKKINVVDYFKRFFSTEL 98 (114)
Q Consensus 80 ~y~~~~~~e~~~~~~~~~~ 98 (114)
+|++++++||+..+++..+
T Consensus 307 ~y~~~t~~e~l~~~~~~~~ 325 (331)
T 1odm_A 307 DREPLSYGDYLQNGLVSLI 325 (331)
T ss_dssp SSCCCBHHHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHH
Confidence 9999999999999887753
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=4.9e-34 Score=216.00 Aligned_cols=97 Identities=20% Similarity=0.234 Sum_probs=90.9
Q ss_pred ceEEECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCC-----CCceeEEEEeeCCCCCeEEecCCCCCCCC
Q 040795 2 LQIKKDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNS-----VKERLSFATFYNPKLDGELGPAPSLITPK 76 (114)
Q Consensus 2 Lqv~~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~-----~~~R~S~~~F~~p~~d~~i~pl~~~~~~~ 76 (114)
|||+.+|+|++|+|.+|++|||+||+||+||||+|||+.|||+.++ ..+|||++||++|+.|++|+ ++++++++
T Consensus 204 LqV~~~g~W~~V~p~pg~lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~ 282 (311)
T 1dcs_A 204 LQAEVGGAFTDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECG 282 (311)
T ss_dssp EEEEETTEEEECCCCTTCEEEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTT
T ss_pred EEEEeCCEEEeCcCCCCeEEEEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCC
Confidence 9999999999999999999999999999999999999999999987 67999999999999999999 99999888
Q ss_pred CCCCC--CceeHHHHHHHHHhcccC
Q 040795 77 TPALF--KKINVVDYFKRFFSTELR 99 (114)
Q Consensus 77 ~p~~y--~~~~~~e~~~~~~~~~~~ 99 (114)
+|++| ++++++||+..+++..+.
T Consensus 283 ~p~~y~~~~~t~~ey~~~~~~~~~~ 307 (311)
T 1dcs_A 283 FDVSLDGETATFQDWIGGNYVNIRR 307 (311)
T ss_dssp CCCCCCSSEEEHHHHHCSSCCCEEC
T ss_pred CccccCCCCccHHHHHHHHHHHHhc
Confidence 99999 999999999987766543
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=99.96 E-value=7.1e-30 Score=190.85 Aligned_cols=82 Identities=30% Similarity=0.521 Sum_probs=76.3
Q ss_pred CceEE-ECCeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCC----CCceeEEEEeeCCCCCeEEecCCCCCCC
Q 040795 1 GLQIK-KDGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNS----VKERLSFATFYNPKLDGELGPAPSLITP 75 (114)
Q Consensus 1 GLqv~-~~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~----~~~R~S~~~F~~p~~d~~i~pl~~~~~~ 75 (114)
||||+ ++|+|++|+|.+|++|||+||+||+||||+|||+.|||+.++ ..+|||++||++|+.|++|+|
T Consensus 190 GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p------- 262 (280)
T 3on7_A 190 GLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE------- 262 (280)
T ss_dssp CEEEECTTSCEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS-------
T ss_pred CeEEEcCCCCEEECcCCCCEEEEEcChHHHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC-------
Confidence 89999 689999999999999999999999999999999999998874 468999999999999999975
Q ss_pred CCCCCCCceeHHHHHHHHHhc
Q 040795 76 KTPALFKKINVVDYFKRFFST 96 (114)
Q Consensus 76 ~~p~~y~~~~~~e~~~~~~~~ 96 (114)
++|++||+..+++.
T Consensus 263 -------~ita~~~l~~rl~~ 276 (280)
T 3on7_A 263 -------RYTADSYLMERLRE 276 (280)
T ss_dssp -------SCBHHHHHHHHHHH
T ss_pred -------CccHHHHHHHHHHH
Confidence 59999999998875
No 7
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=91.65 E-value=0.3 Score=34.45 Aligned_cols=43 Identities=16% Similarity=0.180 Sum_probs=33.3
Q ss_pred CeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCC-CceeEEEEeeCCCC
Q 040795 8 GKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSV-KERLSFATFYNPKL 62 (114)
Q Consensus 8 g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~-~~R~S~~~F~~p~~ 62 (114)
..++.+.|.+|.+|++-+. -.|.|..+.. ++|+||+|.+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 3567899999999998774 3799987544 68999999987754
No 8
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=76.35 E-value=2.6 Score=30.12 Aligned_cols=40 Identities=15% Similarity=0.292 Sum_probs=31.3
Q ss_pred eEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeC
Q 040795 9 KWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYN 59 (114)
Q Consensus 9 ~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~ 59 (114)
....|.|..|.+|++-.+. ..+|.|.. ....|+|++..+.
T Consensus 173 ~~~~v~P~~grlv~F~s~~----------~~~H~V~p-~~~~R~sit~W~~ 212 (247)
T 2hbt_A 173 QFADIEPKFDRLLFFWSDR----------RNPHEVQP-AYATRYAITVWYF 212 (247)
T ss_dssp SCEEECCBTTEEEEEECST----------TCCEEECC-BSSCEEEEEEEEE
T ss_pred ceEEEEcCCCEEEEEecCC----------Cceeeecc-CCCEEEEEEEEEc
Confidence 5689999999999987531 15899975 5679999998664
No 9
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=59.08 E-value=14 Score=26.44 Aligned_cols=38 Identities=18% Similarity=0.095 Sum_probs=30.1
Q ss_pred EEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEeeC
Q 040795 10 WVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFYN 59 (114)
Q Consensus 10 w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~~ 59 (114)
=..|+|..|.+++.-. ..+|+|.......|++++.+++
T Consensus 157 ~~~V~P~~G~~v~F~s------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 157 QQSIKLSAGSLVLYPS------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp EEEECCCTTCEEEEET------------TSEEEECCEEEECEEEEEEEEE
T ss_pred cEEEecCCCEEEEECC------------CCeEcCccccccCEEEEEEehh
Confidence 4679999999999753 3689997655679999998875
No 10
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=47.55 E-value=13 Score=17.55 Aligned_cols=12 Identities=33% Similarity=0.803 Sum_probs=9.3
Q ss_pred eEEECCeEEEec
Q 040795 3 QIKKDGKWVAVK 14 (114)
Q Consensus 3 qv~~~g~w~~v~ 14 (114)
.|+++|.|+...
T Consensus 13 Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 13 YVRKFGEWVLLS 24 (27)
T ss_dssp EEEETTEEEEGG
T ss_pred eEEEcCeEEEcc
Confidence 467899999754
No 11
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=43.32 E-value=23 Score=24.39 Aligned_cols=43 Identities=5% Similarity=-0.063 Sum_probs=29.9
Q ss_pred eEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEe
Q 040795 9 KWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATF 57 (114)
Q Consensus 9 ~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F 57 (114)
..+.+...+|+++|.-|++=..|..+.-+... ....|+|++|=
T Consensus 158 ~~~~~~L~~GsllvM~g~~q~~w~H~Ip~~~~------~~~~RislTFR 200 (204)
T 3s57_A 158 AVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKK------VLAPRVNLTFR 200 (204)
T ss_dssp CCEEEEECTTEEEEEETTHHHHEEEEECCCTT------CCSCEEEEEEE
T ss_pred ceEEEECCCCCEEEECchhhheeEeeccccCC------CCCCEEEEEee
Confidence 56788889999999999877766544322111 23689999874
No 12
>2vf9_A Coat protein; virion, RNA-binding, capsid protein, structural protein, virus; 3.50A {Bacteriophage PRR1}
Probab=42.28 E-value=7.3 Score=24.38 Aligned_cols=18 Identities=28% Similarity=0.331 Sum_probs=14.4
Q ss_pred HHHHhCCccccccceeee
Q 040795 28 LEIFTNGTYRSIEHRATV 45 (114)
Q Consensus 28 le~~Tng~~~s~~HRVv~ 45 (114)
|..-|||+|||++.-|+.
T Consensus 49 lrktsngrykstlklvvp 66 (131)
T 2vf9_A 49 LRKTSNGRYKSTLKLVVP 66 (131)
T ss_dssp EEECTTSEEEEEEEEEEE
T ss_pred EEecCCCceeeeEEEEEE
Confidence 345699999999988864
No 13
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=40.55 E-value=31 Score=24.25 Aligned_cols=45 Identities=9% Similarity=0.049 Sum_probs=33.6
Q ss_pred CeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCCCceeEEEEee
Q 040795 8 GKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSVKERLSFATFY 58 (114)
Q Consensus 8 g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~~~R~S~~~F~ 58 (114)
+..+.+...+++++|.-|+.=..|..|.-+.. .....|+|++|=.
T Consensus 184 ~~~~~i~L~~gsllvM~G~~r~~w~H~I~~~~------~~~~~RIsLTfR~ 228 (238)
T 2iuw_A 184 VERVKIPLDHGTLLIMEGATQADWQHRVPKEY------HSREPRVNLTFRT 228 (238)
T ss_dssp CCEEEEEECTTCEEEEEETHHHHEEEEECCCS------SCCCCEEEEEEEC
T ss_pred CceEEEEcCCCCEEEEChhhhCccEecCCCcC------CCCCCEEEEEeee
Confidence 36889999999999999998777765544321 1356899999864
No 14
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=36.26 E-value=38 Score=25.39 Aligned_cols=56 Identities=20% Similarity=0.135 Sum_probs=39.7
Q ss_pred CCeEEEecCCCCeEEEEehhhHHHHhCCccccccceee------------------eCCCCceeEEEEeeCCCC
Q 040795 7 DGKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRAT------------------VNSVKERLSFATFYNPKL 62 (114)
Q Consensus 7 ~g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv------------------~~~~~~R~S~~~F~~p~~ 62 (114)
+|.++.+...+++++|.-|+.-..|..|.-+....-+- ......|+|++|=.-+..
T Consensus 242 ~~~~~~l~L~~gsLlvM~G~~r~~w~H~I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~ 315 (345)
T 3tht_A 242 DGIAVPVMLPRRSLLVMTGESRYLWTHGITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQT 315 (345)
T ss_dssp TSCEEEEEECTTEEEEECTHHHHTSEEEECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSS
T ss_pred CCceEEEEcCCCcEEEEChHHhhceEccCCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCC
Confidence 46789999999999999999999897765554333221 112356999998765544
No 15
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=31.81 E-value=39 Score=23.10 Aligned_cols=47 Identities=15% Similarity=0.181 Sum_probs=33.2
Q ss_pred EEEecCCCCeEEEEehhhHHHHhCCcc-ccccceeeeCCCCceeEEEEeeCC
Q 040795 10 WVAVKPLPDAFVVNIGDALEIFTNGTY-RSIEHRATVNSVKERLSFATFYNP 60 (114)
Q Consensus 10 w~~v~p~~~~~vvniGd~le~~Tng~~-~s~~HRVv~~~~~~R~S~~~F~~p 60 (114)
-+.|.|..|.+++.-- ...||.. ..++|+|.......|+++..+++-
T Consensus 170 ~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~ 217 (224)
T 2jig_A 170 GLAVKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHV 217 (224)
T ss_dssp SEEECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEES
T ss_pred ceEEecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEc
Confidence 4789999999888753 1233432 578999965545689999888754
No 16
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=29.18 E-value=44 Score=21.39 Aligned_cols=56 Identities=7% Similarity=0.007 Sum_probs=33.9
Q ss_pred CCeEEEecCCCCeEEEEe-h-hh---H---HHHhCCc----cccccceeeeCCCCceeEEEEeeCCCCC
Q 040795 7 DGKWVAVKPLPDAFVVNI-G-DA---L---EIFTNGT----YRSIEHRATVNSVKERLSFATFYNPKLD 63 (114)
Q Consensus 7 ~g~w~~v~p~~~~~vvni-G-d~---l---e~~Tng~----~~s~~HRVv~~~~~~R~S~~~F~~p~~d 63 (114)
.|.|-......|.+.... - |. . .....|. -.-..|||. .++.-|+-+-|++.|...
T Consensus 36 ~GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe-~sdD~~f~leFyc~~~dy 103 (119)
T 3dl3_A 36 VDVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIE-LSDDAQFNINFWSDQDKS 103 (119)
T ss_dssp TTEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEE-ECTTCEEEEEEEECC---
T ss_pred CcEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEE-ECCCeEEEEEEEECchHH
Confidence 578887777777755442 1 11 1 1223332 234679999 667889999999988763
No 17
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=25.35 E-value=1.7e+02 Score=20.27 Aligned_cols=50 Identities=16% Similarity=0.207 Sum_probs=34.0
Q ss_pred eEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCC-CCceeEEEEeeCCCCCeEEecCC
Q 040795 9 KWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNS-VKERLSFATFYNPKLDGELGPAP 70 (114)
Q Consensus 9 ~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~-~~~R~S~~~F~~p~~d~~i~pl~ 70 (114)
.|+.++..+|.+++.-| .++|+...|. ...|.++.+-+.+..++...+..
T Consensus 226 ~~v~~~~~aGd~~~f~~------------~~~H~s~~N~s~~~R~~~~~~~~~~~~~~~~~~~ 276 (291)
T 2opw_A 226 LFVPTPVQRGALVLIHG------------EVVHKSKQNLSDRSRQAYTFHLMEASGTTWSPEN 276 (291)
T ss_dssp GCEEECBCTTCEEEEET------------TCEEEECCBCSSSCCCEEEEEEEECTTCEECTTS
T ss_pred CeeecccCCCcEEEEcC------------CceecCCCCCCCCceEEEEEEEEcCCCCccCccc
Confidence 45666666776666654 3688887553 46899999888886556666543
No 18
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=21.74 E-value=1.6e+02 Score=20.67 Aligned_cols=48 Identities=10% Similarity=-0.094 Sum_probs=32.6
Q ss_pred CeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCC-CCceeEEEEeeCCCCCeEEec
Q 040795 8 GKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNS-VKERLSFATFYNPKLDGELGP 68 (114)
Q Consensus 8 g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~-~~~R~S~~~F~~p~~d~~i~p 68 (114)
..++.++..+|.+++.-| .++|+...|. ...|.++.+-+.+.. +...+
T Consensus 213 ~~~v~~~~~aGd~vlf~~------------~~~H~s~~N~s~~~R~~~~~~y~~~~-~~y~~ 261 (308)
T 2a1x_A 213 KARVHLVMEKGDTVFFHP------------LLIHGSGQNKTQGFRKAISCHFASAD-CHYID 261 (308)
T ss_dssp SCCEEECBCTTCEEEECT------------TCCEEECCBCSSSCEEEEEEEEEETT-CEECC
T ss_pred CCeEEccCCCccEEEECC------------CccccCCCCCCCCceEEEEEEEECCC-ceEcc
Confidence 356666667777666644 3689987663 468999999887764 44433
No 19
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=21.23 E-value=1.3e+02 Score=21.26 Aligned_cols=45 Identities=20% Similarity=0.287 Sum_probs=33.6
Q ss_pred eEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCC---CCceeEEEEeeCCCCCeE
Q 040795 9 KWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNS---VKERLSFATFYNPKLDGE 65 (114)
Q Consensus 9 ~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~---~~~R~S~~~F~~p~~d~~ 65 (114)
.++.++..+|.+++.=| .++|+...|. ...|.++.+-+.+.....
T Consensus 218 ~~v~~~~~aGd~v~f~~------------~l~H~s~~N~~ss~~~R~a~~~~y~~~~~~~ 265 (313)
T 2fct_A 218 SAVPMQMKAGQFIIFWS------------TLMHASYPHSGESQEMRMGFASRYVPSFVHV 265 (313)
T ss_dssp GCEEECBCTTEEEEEET------------TSEEEECCBCSSSSSCEEEEEEEEEETTSEE
T ss_pred ceeEeeeCCceEEEEeC------------CceeeCCCCCCCCCCceEEEEEEEECCCceE
Confidence 56778888888887765 3688887765 468999998888876443
No 20
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=20.07 E-value=1.5e+02 Score=20.36 Aligned_cols=42 Identities=14% Similarity=0.019 Sum_probs=29.2
Q ss_pred CeEEEecCCCCeEEEEehhhHHHHhCCccccccceeeeCCC-------CceeEEEEee
Q 040795 8 GKWVAVKPLPDAFVVNIGDALEIFTNGTYRSIEHRATVNSV-------KERLSFATFY 58 (114)
Q Consensus 8 g~w~~v~p~~~~~vvniGd~le~~Tng~~~s~~HRVv~~~~-------~~R~S~~~F~ 58 (114)
+..+.+...+|+++|.-|+.- .| .|.|..... ..|+|++|=.
T Consensus 153 ~~~~~i~L~~GsllvM~G~~r-~~--------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 153 DPLKRLLLEHGDVVVWGGESR-LF--------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp SCCEEEEECTTCEEEECGGGT-TC--------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred CceEEEECCCCCEEEECchHH-ce--------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 567888888999999888762 12 477654322 3599999863
Done!