Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>040797
MAMVYQPSTKPPLSTSFLSSSTHSLNFLSPNLRVGVRHHQYSYLIPKIPSPPCFRIRRNS
SSSSSSSSNTPPLPETECPVPADQQPINEYQNLSSSFPFSWASGDFVEYCSRLFVTGASF
ALFVGLPVAWFGAVGPDSEPLERILGAVSSGVIVVTLAVVRMYLGWAYVGNRLLSATVEY
EETGWYDGQIWVKTAEVLARDRLLGSFSVKPVLSRLKYTLITLGASLFVCALLLINLEGG
QKGSYLTPTEPGDEAIPGVYNDDSAKSFEPDAFCGEPSPP

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  040797
        (280 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2142999 - symbol:AT5G11840 "AT5G11840" species...   802  7.6e-80   1
TAIR|locus:2158197 - symbol:CGLD27 "AT5G67370" species:37...   386  9.2e-36   1


>TAIR|locus:2142999 [details] [associations]
            symbol:AT5G11840 "AT5G11840" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0015996 "chlorophyll catabolic process"
            evidence=RCA] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:BT050414
            IPI:IPI00535315 RefSeq:NP_196745.4 UniGene:At.19926 STRING:B6IDH6
            PaxDb:B6IDH6 PRIDE:B6IDH6 EnsemblPlants:AT5G11840.1 GeneID:831057
            KEGG:ath:AT5G11840 TAIR:At5g11840 eggNOG:NOG313850
            HOGENOM:HOG000076884 OMA:LAVVRMY PhylomeDB:B6IDH6
            ProtClustDB:CLSN2716566 Genevestigator:B6IDH6 InterPro:IPR009631
            Pfam:PF06799 ProDom:PD016444 Uniprot:B6IDH6
        Length = 265

 Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
 Identities = 153/211 (72%), Positives = 180/211 (85%)

Query:    72 PLPETECPVPADQQPINEYQNLSSSFPFSWASGDFVEYCSRLFVTGASFALFVGLPVAWF 131
             PLPET+CPVP +QQPINEYQ+LS+SFPFSWASGD +EY +RLF+TGASFA FVGLPV+WF
Sbjct:    55 PLPETDCPVPPEQQPINEYQSLSTSFPFSWASGDLIEYSTRLFLTGASFAFFVGLPVSWF 114

Query:   132 GAVGPDSEPLERILGAVSSGVIVVTLAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIW 191
             G++GP+ EP++RIL A SSG+ VVTLAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQ+W
Sbjct:   115 GSIGPEYEPVKRILAASSSGIFVVTLAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQVW 174

Query:   192 VKTAEVLARDRLLGSFSVKPVLSRLKYTLITLGASLFVCALLLINL-EGGQKGSYLTPTE 250
             VKT EVLARDRLLGSFSVKPVL+RLK TL+ LG SL    +L+INL +     SY T  +
Sbjct:   175 VKTPEVLARDRLLGSFSVKPVLARLKNTLVILGLSL----ILVINLGDSPIATSYRTYRD 230

Query:   251 PGDEA---IPGVYNDDSAKSFEPDAFCGEPS 278
             P D +   IPG YND++A++FEP+AFCGEPS
Sbjct:   231 PRDRSSLPIPGAYNDETARTFEPEAFCGEPS 261


>TAIR|locus:2158197 [details] [associations]
            symbol:CGLD27 "AT5G67370" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB007645
            InterPro:IPR009631 Pfam:PF06799 ProDom:PD016444 EMBL:AF360127
            EMBL:AY051028 IPI:IPI00535387 RefSeq:NP_201538.1 UniGene:At.6496
            STRING:Q9FN15 PaxDb:Q9FN15 PRIDE:Q9FN15 EnsemblPlants:AT5G67370.1
            GeneID:836872 KEGG:ath:AT5G67370 TAIR:At5g67370 eggNOG:NOG07098
            HOGENOM:HOG000272725 InParanoid:Q9FN15 OMA:RIYLGWS PhylomeDB:Q9FN15
            ProtClustDB:CLSN2687046 ArrayExpress:Q9FN15 Genevestigator:Q9FN15
            Uniprot:Q9FN15
        Length = 327

 Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
 Identities = 83/163 (50%), Positives = 107/163 (65%)

Query:    74 PETECPVPADQQPINEYQNLSSSFPFSWASGDFVEYCSRLFVTGASFALF--VGLPVAWF 131
             P +E  VP+DQ+P+NEY +L     +SW      E+  RL   G     F  +G+PVA  
Sbjct:    80 PSSEIEVPSDQRPVNEYSSLKEGMLYSWGELGPSEFFIRL--GGLWLVTFTVLGVPVA-A 136

Query:   132 GAVGPDSEPLERILGAVSSGVIVVTLAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIW 191
              +  P  EPL  IL A +  + +V+L V+R+YLGW+YVG+RLLSA + YEE+GWYDGQ+W
Sbjct:   137 ASFNPSREPLRFILAAGTGTLFLVSLIVLRIYLGWSYVGDRLLSAVIPYEESGWYDGQMW 196

Query:   192 VKTAEVLARDRLLGSFSVKPVLSRLKYTLITLGASLFVCALLL 234
             VK  EVLARDRLLGS+ VKPV+  LK TLI  GA L V A +L
Sbjct:   197 VKPPEVLARDRLLGSYKVKPVIKMLKQTLIGTGA-LLVSAFVL 238


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.138   0.435    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      280       247   0.00078  114 3  11 22  0.44    33
                                                     32  0.46    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  201 KB (2113 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.15u 0.19s 21.34t   Elapsed:  00:00:01
  Total cpu time:  21.15u 0.19s 21.34t   Elapsed:  00:00:01
  Start:  Sat May 11 12:29:26 2013   End:  Sat May 11 12:29:27 2013

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