BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>040802
MGKCGSHMMRRRMIMVTVHMMIVVMMIKNYAYADTNIIFNPCDDSKVKRWDGFTFGLAFS
TKEAFFLDQIQLSPCDSRLALPTKNAKLAIFRPKVDEISLLTIDDTNFNPILSGGYVVAF
AGRKYAARSAPTLVADSTHTVTNLTLVLEFQQGTLENLYWKSLGCDSCSGETSVCINNTV
CAVPNLKCRNHGGPIDCNIGIQLTFSGTDEKRQVLNSWYEVENLRKLSLYDLYSNVAEAV
PGHPQ

High Scoring Gene Products

Symbol, full name Information P value
AT2G15910 protein from Arabidopsis thaliana 2.8e-66
AT3G44150 protein from Arabidopsis thaliana 4.2e-63
AT3G11800 protein from Arabidopsis thaliana 1.3e-59
AT3G48630 protein from Arabidopsis thaliana 3.7e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  040802
        (245 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2044606 - symbol:AT2G15910 "AT2G15910" species...   674  2.8e-66   1
TAIR|locus:2081413 - symbol:AT3G44150 "AT3G44150" species...   644  4.2e-63   1
TAIR|locus:2081571 - symbol:AT3G11800 "AT3G11800" species...   611  1.3e-59   1
TAIR|locus:2114500 - symbol:AT3G48630 "AT3G48630" species...   110  3.7e-06   1


>TAIR|locus:2044606 [details] [associations]
            symbol:AT2G15910 "AT2G15910" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0008150 "biological_process" evidence=ND] EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC006438 InterPro:IPR007872
            Pfam:PF05207 PROSITE:PS51074 KO:K15455 IPI:IPI00530646 PIR:F84534
            RefSeq:NP_179191.1 UniGene:At.48478 UniGene:At.48479
            ProteinModelPortal:Q9XIM2 SMR:Q9XIM2 PRIDE:Q9XIM2
            EnsemblPlants:AT2G15910.1 GeneID:816087 KEGG:ath:AT2G15910
            TAIR:At2g15910 HOGENOM:HOG000153857 InParanoid:Q9XIM2 OMA:EEIANCP
            PhylomeDB:Q9XIM2 ProtClustDB:CLSN2913165 Genevestigator:Q9XIM2
            Uniprot:Q9XIM2
        Length = 367

 Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
 Identities = 127/222 (57%), Positives = 164/222 (73%)

Query:    33 ADTNIIFNPCDDSKVKRWDGFTFGLAFSTKEAFFLDQIQLSPCDSRLALPTKNAKLAIFR 92
             AD N +++PC D+++ + DGFT G+A S+KEAFFLDQ+QLSPCD+RL L  K A+LA+FR
Sbjct:   143 ADNNPVYSPCSDTQISKGDGFTIGIAISSKEAFFLDQVQLSPCDTRLGLAAKMAQLALFR 202

Query:    93 PKVDEISLLTIDDTNFNPILSGGYVVAFAGRKYAARSAPTLVADSTHTVTNLTLV----- 147
             PKVDEISLL+ID + FNP  +GG++V FAG KYAARS P  VAD ++T+T  TLV     
Sbjct:   203 PKVDEISLLSIDTSKFNPSEAGGFMVGFAGSKYAARSYPVKVADGSNTITAFTLVMKLTL 262

Query:   148 ----LEFQQGTLENLYWKSLGCDSCSG---ETSVCINNTVCAVPNLKCRNHGGPIDCNIG 200
                 LEFQ+G L+NL+WKS GCD C G    +SVC+N T CAVP  KC+ +GG  +CNIG
Sbjct:   263 SPLVLEFQKGVLQNLFWKSFGCDLCKGTGSSSSVCLNGTDCAVPTSKCKANGGQANCNIG 322

Query:   201 IQLTFSGTDEKRQVLNSWYEVENLRKLSLYDLYSNVAEAVPG 242
             IQ+ FSGTD   + LN+WYEV NLR+ SL DLY+N  +++ G
Sbjct:   323 IQVAFSGTDRNLESLNTWYEVNNLRQYSLTDLYANAVDSLSG 364


>TAIR|locus:2081413 [details] [associations]
            symbol:AT3G44150 "AT3G44150" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] GO:GO:0005886 EMBL:CP002686 GenomeReviews:BA000014_GR
            EMBL:AY065371 EMBL:AY150454 IPI:IPI00526083 RefSeq:NP_190001.2
            UniGene:At.28512 PaxDb:Q8VZ18 PRIDE:Q8VZ18
            EnsemblPlants:AT3G44150.1 GeneID:823536 KEGG:ath:AT3G44150
            TAIR:At3g44150 eggNOG:NOG252192 HOGENOM:HOG000006161
            InParanoid:Q8VZ18 OMA:QNLHWKK PhylomeDB:Q8VZ18
            ProtClustDB:CLSN2917961 Genevestigator:Q8VZ18 Uniprot:Q8VZ18
        Length = 246

 Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
 Identities = 117/209 (55%), Positives = 160/209 (76%)

Query:    34 DTNIIFNPCDDSKVKRWDGFTFGLAFSTKEAFFLDQ-IQLSPCDSRLALPTKNAKLAIFR 92
             +TN I++PC D++++R DGFTFG+AFS++ +FF++Q + LSPCD RL+L   N++ ++FR
Sbjct:    30 NTNTIYSPCSDTRIQRSDGFTFGIAFSSRPSFFINQTVLLSPCDRRLSLAAMNSQFSVFR 89

Query:    93 PKVDEISLLTIDDTNFNPILSGGYVVAFAGRKYAARSAPTLVADSTHTVTNLTLVLEFQQ 152
             PK+DEISLL+I+ + F P   GGY+VAFAGRKYAARS P  +A+ST  VT+ TLV+EFQ+
Sbjct:    90 PKIDEISLLSINTSAFFPDNYGGYMVAFAGRKYAARSIPAFIANSTFIVTSFTLVMEFQK 149

Query:   153 GTLENLYWKSLGCDSCSGETS-VCINNTVCAVPNLKCRNHGGPIDCNIGIQLTFSGTDEK 211
             G L+NLYWK  GC SC G  + VC+N   CA+    C+  GG +DC++GIQL FSGTD+ 
Sbjct:   150 GRLQNLYWKRDGCASCKGNQNFVCLNKQDCAIRTPSCKGRGGAVDCSLGIQLAFSGTDKH 209

Query:   212 RQVLNSWYEVENLRKLSLYDLYSNVAEAV 240
               VLNSWYEVENL++ SLY LYSN+  ++
Sbjct:   210 LAVLNSWYEVENLKQYSLYGLYSNLKSSL 238


>TAIR|locus:2081571 [details] [associations]
            symbol:AT3G11800 "AT3G11800" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002686
            GenomeReviews:BA000014_GR HOGENOM:HOG000006161 EMBL:AY046012
            EMBL:AY079399 IPI:IPI00537311 RefSeq:NP_566401.1 UniGene:At.18737
            PaxDb:Q94AI8 PRIDE:Q94AI8 EnsemblPlants:AT3G11800.1 GeneID:820353
            KEGG:ath:AT3G11800 TAIR:At3g11800 eggNOG:NOG287287
            InParanoid:Q94AI8 OMA:SWYEVAN PhylomeDB:Q94AI8
            ProtClustDB:CLSN2914959 ArrayExpress:Q94AI8 Genevestigator:Q94AI8
            Uniprot:Q94AI8
        Length = 246

 Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
 Identities = 116/215 (53%), Positives = 153/215 (71%)

Query:    34 DTNIIFNPCDDSKVKRWDGFTFGLAFSTKEAFFLDQ----IQLSPCDSRLALPTKNAKLA 89
             D N +++PC DS V   DGFTFG+AF+ K++FF       +Q SPCD R      N+++A
Sbjct:    24 DNNQVYSPCSDSTVAIGDGFTFGIAFAAKDSFFSTNRSKSVQYSPCDHRHLSLNGNSEVA 83

Query:    90 IFRPKVDEISLLTID---DTNFNPILSGGYVVAFAGRKYAARSAPTLVADSTHTVTNLTL 146
             +FRPKVDEI+LLTI+    ++F P  S GY+VAFAG KYAARS P +VADS H VT+ TL
Sbjct:    84 VFRPKVDEITLLTINTSSSSSFRPDASKGYMVAFAGAKYAARSLPIMVADSNHIVTSFTL 143

Query:   147 VLEFQQGTLENLYWKSLGCDSCSGETS-VCINNTVCAVPNLKCRNHGGPIDCNIGIQLTF 205
             VLEFQ+G LEN++WK  GC  CSG++  VC+N   CA+    C+N GG +DC++GIQL F
Sbjct:   144 VLEFQKGRLENMFWKKDGCSKCSGDSKFVCLNKEECAIKPQNCKNQGGQVDCSLGIQLAF 203

Query:   206 SGTDEKRQVLNSWYEVENLRKLSLYDLYSNVAEAV 240
             SGTD+    LNSWYEV NL++ SLY LYSN+ +++
Sbjct:   204 SGTDKHYTALNSWYEVANLKQYSLYGLYSNLKDSL 238


>TAIR|locus:2114500 [details] [associations]
            symbol:AT3G48630 "AT3G48630" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 IPI:IPI00938632 RefSeq:NP_190432.4
            UniGene:At.65260 DNASU:824023 EnsemblPlants:AT3G48630.1
            GeneID:824023 KEGG:ath:AT3G48630 Uniprot:F4JF36
        Length = 128

 Score = 110 (43.8 bits), Expect = 3.7e-06, P = 3.7e-06
 Identities = 24/56 (42%), Positives = 33/56 (58%)

Query:   116 YVVAFAGRKYAARSAPTLVADSTHTVTNLTLVLEFQQGTLENLYWKSLGCDSCSGE 171
             Y V   G +  +   P  +A+ST  VT+ T V+EFQ+G L+NLYWK   C   +GE
Sbjct:     2 YNVGTRGSEIRSEVDPAFIANSTFIVTSFTWVMEFQKGRLQNLYWKRDVCAK-AGE 56


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.419    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      245       225   0.00077  113 3  11 22  0.39    33
                                                     32  0.41    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  608 (65 KB)
  Total size of DFA:  197 KB (2111 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.23u 0.12s 18.35t   Elapsed:  00:00:01
  Total cpu time:  18.23u 0.12s 18.35t   Elapsed:  00:00:01
  Start:  Sat May 11 12:38:02 2013   End:  Sat May 11 12:38:03 2013

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