BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040808
(511 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 169/300 (56%), Gaps = 19/300 (6%)
Query: 193 KRFSYSDVRRMTKSFSDK--LGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEE--FINE 248
KRFS +++ + +FS+K LG+GG+ VYKG L DG LVAVK +K + G E F E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 249 VASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQ 308
V IS H N++ GFC +R L+Y +M NGS+ + E + L+W +
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL--RERPESQPPLDWPKRQR 143
Query: 309 IAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLD 368
IA+G ARGL YLH C+ +I+H D+K NI LDE+F + DFGLAK + K+ +
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA- 202
Query: 369 TRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIY- 427
RGT G+IAPE G S K+DV+ YG+M+ E++ G++ D+ + + +
Sbjct: 203 VRGTIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 260
Query: 428 ------KQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGS 481
K++E D L G +EE E ++I V+L C Q+ P +RP M++VV MLEG
Sbjct: 261 KGLLKEKKLEALVDVDLQGNYKDEEVE---QLIQVALLCTQSSPMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/300 (38%), Positives = 167/300 (55%), Gaps = 19/300 (6%)
Query: 193 KRFSYSDVRRMTKSFSDK--LGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEE--FINE 248
KRFS +++ + +F +K LG+GG+ VYKG L DG LVAVK +K + G E F E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 249 VASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQ 308
V IS H N++ GFC +R L+Y +M NGS+ + E + L+W +
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL--RERPESQPPLDWPKRQR 135
Query: 309 IAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLD 368
IA+G ARGL YLH C+ +I+H D+K NI LDE+F + DFGLAK + K+ +
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA- 194
Query: 369 TRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIY- 427
RG G+IAPE G S K+DV+ YG+M+ E++ G++ D+ + + +
Sbjct: 195 VRGXIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252
Query: 428 ------KQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGS 481
K++E D L G +EE E ++I V+L C Q+ P +RP M++VV MLEG
Sbjct: 253 KGLLKEKKLEALVDVDLQGNYKDEEVE---QLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 151/295 (51%), Gaps = 20/295 (6%)
Query: 194 RFSYSDVRRMTKSFSDK--LGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVAS 251
R D+ T +F K +G G + VYKG L DG VA+K G E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 252 -ISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIA 310
+S H ++V +GFC E+ + LIY++M NG+L +++Y S ++ W +I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG--SDLPTMSMSWEQRLEIC 145
Query: 311 VGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ-TEKKESFISMLDT 369
+G ARGL YLH I+H D+K NI LDE+F PKI+DFG++K+ TE ++ + +
Sbjct: 146 IGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV-V 201
Query: 370 RGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQ 429
+GT GYI PE F + G ++ KSDVYS+G+++ E++ R V N
Sbjct: 202 KGTLGYIDPEYFIK--GRLTEKSDVYSFGVVLFEVLCARSAI---VQSLPREMVNLAEWA 256
Query: 430 IETEYDFQLDGVVTEE-----EKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
+E+ + QL+ +V E +K ++ C+ DRPSM V+ LE
Sbjct: 257 VESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 151/295 (51%), Gaps = 20/295 (6%)
Query: 194 RFSYSDVRRMTKSFSDK--LGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVAS 251
R D+ T +F K +G G + VYKG L DG VA+K G E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 252 -ISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIA 310
+S H ++V +GFC E+ + LIY++M NG+L +++Y S ++ W +I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG--SDLPTMSMSWEQRLEIC 145
Query: 311 VGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ-TEKKESFISMLDT 369
+G ARGL YLH I+H D+K NI LDE+F PKI+DFG++K+ TE ++ + +
Sbjct: 146 IGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXV-V 201
Query: 370 RGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQ 429
+GT GYI PE F + G ++ KSDVYS+G+++ E++ R V N
Sbjct: 202 KGTLGYIDPEYFIK--GRLTEKSDVYSFGVVLFEVLCARSAI---VQSLPREMVNLAEWA 256
Query: 430 IETEYDFQLDGVVTEE-----EKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
+E+ + QL+ +V E +K ++ C+ DRPSM V+ LE
Sbjct: 257 VESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 145/298 (48%), Gaps = 23/298 (7%)
Query: 195 FSYSDVRRMTKSFSD--------KLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEE-- 244
FS+ +++ +T +F + K+G+GG+ VYKG + + VAVK + + D E
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 245 ---FINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTL 301
F E+ +++ H N+V LGF + L+Y +MPNGSL + +G L
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGTPPL 124
Query: 302 EWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKE 361
W +IA G A G+ +LH +I H DIK NI LDE F KISDFGLA+ +EK
Sbjct: 125 SWHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFA 181
Query: 362 SFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
+ GT Y+APE G ++ KSD+YS+G+++ E++ G D
Sbjct: 182 QXVMXXRIVGTTAYMAPEAL---RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 238
Query: 422 FPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
+ E + +D + + + + M V+ C+ RP + KV ++L+
Sbjct: 239 DIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 145/298 (48%), Gaps = 23/298 (7%)
Query: 195 FSYSDVRRMTKSFSD--------KLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEE-- 244
FS+ +++ +T +F + K+G+GG+ VYKG + + VAVK + + D E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 245 ---FINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTL 301
F E+ +++ H N+V LGF + L+Y +MPNGSL + +G L
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGTPPL 130
Query: 302 EWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKE 361
W +IA G A G+ +LH +I H DIK NI LDE F KISDFGLA+ +EK
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 362 SFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
+ GT Y+APE G ++ KSD+YS+G+++ E++ G D
Sbjct: 188 QTVMXXRIVGTTAYMAPEAL---RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244
Query: 422 FPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
+ E + +D + + + + M V+ C+ RP + KV ++L+
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 145/298 (48%), Gaps = 23/298 (7%)
Query: 195 FSYSDVRRMTKSFSD--------KLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEE-- 244
FS+ +++ +T +F + K+G+GG+ VYKG + + VAVK + + D E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 245 ---FINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTL 301
F E+ +++ H N+V LGF + L+Y +MPNGSL + +G L
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGTPPL 130
Query: 302 EWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKE 361
W +IA G A G+ +LH +I H DIK NI LDE F KISDFGLA+ +EK
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 362 SFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
+ GT Y+APE G ++ KSD+YS+G+++ E++ G D
Sbjct: 188 QTVMXSRIVGTTAYMAPEAL---RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244
Query: 422 FPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
+ E + +D + + + + M V+ C+ RP + KV ++L+
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 118/231 (51%), Gaps = 23/231 (9%)
Query: 195 FSYSDVRRMTKSFSD--------KLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEE-- 244
FS+ +++ +T +F + K G+GG+ VYKG + + VAVK + + D E
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 245 ---FINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTL 301
F E+ ++ H N+V LGF + L+Y + PNGSL + +G L
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL---SCLDGTPPL 121
Query: 302 EWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKE 361
W +IA G A G+ +LH +I H DIK NI LDE F KISDFGLA+ +EK
Sbjct: 122 SWHXRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFA 178
Query: 362 SFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNAD 412
+ GT Y APE G ++ KSD+YS+G+++ E++ G D
Sbjct: 179 QXVXXSRIVGTTAYXAPEAL---RGEITPKSDIYSFGVVLLEIITGLPAVD 226
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 141/290 (48%), Gaps = 25/290 (8%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGE---EFINEVASISRTSHVNIVP 262
+ +K+G G + V++ G VAVK++ + E EF+ EVA + R H NIV
Sbjct: 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 263 FLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
F+G + +++ E++ GSL + ++ S + L+ R +A +A+G+ YLH
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLH---KSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
N IVH ++K N+ +D+ + K+ DFGL++ K +F+S GT ++APEV
Sbjct: 156 R-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLR 212
Query: 383 RHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVV 442
+ KSDVYS+G+++ E+ + + + N Q+ F+ +
Sbjct: 213 DEPS--NEKSDVYSFGVILWEL-----------ATLQQPWGNLNPAQVVAAVGFKCKRL- 258
Query: 443 TEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSIENLQIPPKPS 492
E + + ++ + C P RPS ++++L I++ PP S
Sbjct: 259 -EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPNRS 307
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 139/290 (47%), Gaps = 25/290 (8%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGE---EFINEVASISRTSHVNIVP 262
+ +K+G G + V++ G VAVK++ + E EF+ EVA + R H NIV
Sbjct: 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 263 FLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
F+G + +++ E++ GSL + ++ S + L+ R +A +A+G+ YLH
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLH---KSGAREQLDERRRLSMAYDVAKGMNYLH- 154
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
N IVH D+K N+ +D+ + K+ DFGL++ K F+ GT ++APEV
Sbjct: 155 NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLR 212
Query: 383 RHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVV 442
+ KSDVYS+G+++ E+ + + + N Q+ F+ +
Sbjct: 213 DEPS--NEKSDVYSFGVILWEL-----------ATLQQPWGNLNPAQVVAAVGFKCKRL- 258
Query: 443 TEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSIENLQIPPKPS 492
E + + ++ + C P RPS ++++L I++ PP S
Sbjct: 259 -EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPNRS 307
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 109/205 (53%), Gaps = 15/205 (7%)
Query: 207 FSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFI---NEVASISRTSHVNIVPF 263
S ++G G + VYKG VAVK++K + E+F NEVA + +T HVNI+ F
Sbjct: 40 LSTRIGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLF 97
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRG 323
+G+ K A++ ++ SL ++++ E+ + + IA A+G++YLH
Sbjct: 98 MGYM-TKDNLAIVTQWCEGSSLYKHLHVQETK-----FQMFQLIDIARQTAQGMDYLHAK 151
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF-C 382
I+H D+K +NI L E KI DFGLA + + G+ ++APEV
Sbjct: 152 ---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRM 208
Query: 383 RHFGGVSHKSDVYSYGMMIHEMVIG 407
+ S +SDVYSYG++++E++ G
Sbjct: 209 QDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 133/290 (45%), Gaps = 24/290 (8%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRL-VAVKVMKNLKDNGEEFINEVASISRTSH 257
++ R + KLG G Y +VY+G L VAVK +K EEF+ E A + H
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 258 VNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
N+V LG C + +I EFM G+L Y+ + ++ + + +A I+ +
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE----CNRQEVSAVVLLYMATQISSAM 122
Query: 318 EYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIA 377
EYL + +H D+ N + E+ K++DFGL++ ++F + + + A
Sbjct: 123 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTA 178
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQ 437
PE + S KSDV+++G+++ E+ A +S P+ +Y+ +E +Y +
Sbjct: 179 PESLA--YNKFSIKSDVWAFGVLLWEI------ATYGMSPYPGIDPSQVYELLEKDYRME 230
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSIENLQI 487
E+ E+ + C Q +P DRPS ++ + E + I
Sbjct: 231 RPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFETMFQESSI 273
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 109/207 (52%), Gaps = 15/207 (7%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEE---FINEVASISRTSHVNIVP 262
+ ++G G + VYKG VAVK++ ++ F NEV + +T HVNI+
Sbjct: 27 TVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 263 FLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
F+G+ K + A++ ++ SL +++ E+ E + + IA ARG++YLH
Sbjct: 85 FMGYS-TKPQLAIVTQWCEGSSLYHHLHASETK-----FEMKKLIDIARQTARGMDYLHA 138
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF- 381
I+H D+K +NI L ED KI DFGLA + + G+ ++APEV
Sbjct: 139 KS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
+ S +SDVY++G++++E++ G+
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 130/282 (46%), Gaps = 24/282 (8%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRL-VAVKVMKNLKDNGEEFINEVASISRTSH 257
++ R + KLG G Y +VY+G L VAVK +K EEF+ E A + H
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 258 VNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
N+V LG C + +I EFM G+L Y+ + ++ + + +A I+ +
Sbjct: 67 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRE----CNRQEVSAVVLLYMATQISSAM 122
Query: 318 EYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIA 377
EYL + +H D+ N + E+ K++DFGL++ ++ + + + A
Sbjct: 123 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTA 178
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQ 437
PE + S KSDV+++G+++ E+ A +S P+ +Y+ +E +Y +
Sbjct: 179 PESLA--YNKFSIKSDVWAFGVLLWEI------ATYGMSPYPGIDPSQVYELLEKDYRME 230
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
E+ E+ + C Q +P DRPS ++ + E
Sbjct: 231 RPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 265
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 135/295 (45%), Gaps = 26/295 (8%)
Query: 188 GSLAPKRFSYS--DVRRMTKSFSDKLGQGGYADVYKGTLPDGRL-VAVKVMKNLKDNGEE 244
G++ P +Y ++ R + KLG G Y +VY+G L VAVK +K EE
Sbjct: 1 GAMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 60
Query: 245 FINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWR 304
F+ E A + H N+V LG C + +I EFM G+L Y+ + ++ +
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE----CNRQEVNAV 116
Query: 305 TVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFI 364
+ +A I+ +EYL + +H D+ N + E+ K++DFGL++ +++
Sbjct: 117 VLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYT 172
Query: 365 SMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPN 424
+ + + APE + S KSDV+++G+++ E+ + + S
Sbjct: 173 AHAGAKFPIKWTAPESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----- 225
Query: 425 AIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
+Y+ +E +Y + E+ E+ + C Q +P DRPS ++ + E
Sbjct: 226 -VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 272
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 137/303 (45%), Gaps = 26/303 (8%)
Query: 188 GSLAPKRFSYS--DVRRMTKSFSDKLGQGGYADVYKGTLPDGRL-VAVKVMKNLKDNGEE 244
G++ P +Y ++ R + KLG G Y +VY+G L VAVK +K EE
Sbjct: 1 GAMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 60
Query: 245 FINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWR 304
F+ E A + H N+V LG C + +I EFM G+L Y+ + ++ +
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE----CNRQEVSAV 116
Query: 305 TVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFI 364
+ +A I+ +EYL + +H D+ N + E+ K++DFGL++ +++
Sbjct: 117 VLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYT 172
Query: 365 SMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPN 424
+ + + APE + S KSDV+++G+++ E+ + + S
Sbjct: 173 AHAGAKFPIKWTAPESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----- 225
Query: 425 AIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSIEN 484
+Y+ +E +Y + E+ E+ + C Q +P DRPS ++ + E +
Sbjct: 226 -VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFETMFQE 277
Query: 485 LQI 487
I
Sbjct: 278 SSI 280
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 15/203 (7%)
Query: 210 KLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEE---FINEVASISRTSHVNIVPFLGF 266
++G G + VYKG VAVK++ ++ F NEV + +T HVNI+ F+G+
Sbjct: 19 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 267 CYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNI 326
K + A++ ++ SL +++ E+ E + + IA ARG++YLH
Sbjct: 77 S-TKPQLAIVTQWCEGSSLYHHLHASETK-----FEMKKLIDIARQTARGMDYLHAKS-- 128
Query: 327 RIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF-CRHF 385
I+H D+K +NI L ED KI DFGLA + G+ ++APEV +
Sbjct: 129 -IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 187
Query: 386 GGVSHKSDVYSYGMMIHEMVIGR 408
S +SDVY++G++++E++ G+
Sbjct: 188 NPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 134/294 (45%), Gaps = 25/294 (8%)
Query: 188 GSLAPK-RFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPDGRL-VAVKVMKNLKDNGEEF 245
G++ P + ++ R + KLG G Y +VY+G L VAVK +K EEF
Sbjct: 1 GAMDPSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 60
Query: 246 INEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRT 305
+ E A + H N+V LG C + +I EFM G+L Y+ + ++ +
Sbjct: 61 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVV 116
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+ +A I+ +EYL + +H D+ N + E+ K++DFGL++ +++ +
Sbjct: 117 LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTA 172
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNA 425
+ + APE + S KSDV+++G+++ E+ + + S
Sbjct: 173 HAGAKFPIKWTAPESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ------ 224
Query: 426 IYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
+Y+ +E +Y + E+ E+ + C Q +P DRPS ++ + E
Sbjct: 225 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 271
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 134/294 (45%), Gaps = 26/294 (8%)
Query: 189 SLAPKRFSYS--DVRRMTKSFSDKLGQGGYADVYKGTLPDGRL-VAVKVMKNLKDNGEEF 245
S+ P +Y ++ R + KLG G Y +VY+G L VAVK +K EEF
Sbjct: 2 SMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 61
Query: 246 INEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRT 305
+ E A + H N+V LG C + +I EFM G+L Y+ + ++ +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRE----CNRQEVNAVV 117
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+ +A I+ +EYL + +H D+ N + E+ K++DFGL++ +++ +
Sbjct: 118 LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTA 173
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNA 425
+ + APE + S KSDV+++G+++ E+ + + S
Sbjct: 174 HAGAKFPIKWTAPESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ------ 225
Query: 426 IYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
+Y+ +E +Y + E+ E+ + C Q +P DRPS ++ + E
Sbjct: 226 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 272
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 136/301 (45%), Gaps = 25/301 (8%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPDGRL-VAVKVMKNLKDNGEEFI 246
G ++P + ++ R + KLG G Y +VY+G L VAVK +K EEF+
Sbjct: 1 GHMSPN-YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 59
Query: 247 NEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTV 306
E A + H N+V LG C + +I EFM G+L Y+ + ++ + +
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVL 115
Query: 307 YQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISM 366
+A I+ +EYL + +H D+ N + E+ K++DFGL++ +++ +
Sbjct: 116 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAH 171
Query: 367 LDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAI 426
+ + APE + S KSDV+++G+++ E+ + + S +
Sbjct: 172 AGAKFPIKWTAPESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ------V 223
Query: 427 YKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSIENLQ 486
Y+ +E +Y + E+ E+ + C Q +P DRPS ++ + E +
Sbjct: 224 YELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFETMFQESS 276
Query: 487 I 487
I
Sbjct: 277 I 277
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 15/207 (7%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEE---FINEVASISRTSHVNIVP 262
+ ++G G + VYKG VAVK++ ++ F NEV + +T HVNI+
Sbjct: 27 TVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 263 FLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
F+G+ + A++ ++ SL +++ E+ E + + IA ARG++YLH
Sbjct: 85 FMGYS-TAPQLAIVTQWCEGSSLYHHLHASETK-----FEMKKLIDIARQTARGMDYLHA 138
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF- 381
I+H D+K +NI L ED KI DFGLA + + G+ ++APEV
Sbjct: 139 KS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
+ S +SDVY++G++++E++ G+
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 136/301 (45%), Gaps = 25/301 (8%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPDGRL-VAVKVMKNLKDNGEEFI 246
G ++P + ++ R + KLG G Y +VY+G L VAVK +K EEF+
Sbjct: 1 GHMSP-NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 59
Query: 247 NEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTV 306
E A + H N+V LG C + +I EFM G+L Y+ + ++ + +
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVL 115
Query: 307 YQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISM 366
+A I+ +EYL + +H D+ N + E+ K++DFGL++ +++ +
Sbjct: 116 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAP 171
Query: 367 LDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAI 426
+ + APE + S KSDV+++G+++ E+ + + S +
Sbjct: 172 AGAKFPIKWTAPESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ------V 223
Query: 427 YKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSIENLQ 486
Y+ +E +Y + E+ E+ + C Q +P DRPS ++ + E +
Sbjct: 224 YELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFETMFQESS 276
Query: 487 I 487
I
Sbjct: 277 I 277
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 134/294 (45%), Gaps = 26/294 (8%)
Query: 189 SLAPKRFSYS--DVRRMTKSFSDKLGQGGYADVYKGTLPDGRL-VAVKVMKNLKDNGEEF 245
S+ P +Y ++ R + KLG G Y +VY+G L VAVK +K EEF
Sbjct: 2 SMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 61
Query: 246 INEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRT 305
+ E A + H N+V LG C + +I EFM G+L Y+ + ++ +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVV 117
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+ +A I+ +EYL + +H D+ N + E+ K++DFGL++ +++ +
Sbjct: 118 LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTA 173
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNA 425
+ + APE + S KSDV+++G+++ E+ + + S
Sbjct: 174 HAGAKFPIKWTAPESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ------ 225
Query: 426 IYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
+Y+ +E +Y + E+ E+ + C Q +P DRPS ++ + E
Sbjct: 226 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 272
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 136/301 (45%), Gaps = 25/301 (8%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPDGRL-VAVKVMKNLKDNGEEFI 246
G++ P + ++ R + KLG G Y +VY+G L VAVK +K EEF+
Sbjct: 1 GAMDP-NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 59
Query: 247 NEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTV 306
E A + H N+V LG C + +I EFM G+L Y+ + ++ + +
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVL 115
Query: 307 YQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISM 366
+A I+ +EYL + +H D+ N + E+ K++DFGL++ +++ +
Sbjct: 116 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAH 171
Query: 367 LDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAI 426
+ + APE + S KSDV+++G+++ E+ + + S +
Sbjct: 172 AGAKFPIKWTAPESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ------V 223
Query: 427 YKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSIENLQ 486
Y+ +E +Y + E+ E+ + C Q +P DRPS ++ + E +
Sbjct: 224 YELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFETMFQESS 276
Query: 487 I 487
I
Sbjct: 277 I 277
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 129/282 (45%), Gaps = 24/282 (8%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRL-VAVKVMKNLKDNGEEFINEVASISRTSH 257
++ R + KLG G Y +VY+G L VAVK +K EEF+ E A + H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 258 VNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
N+V LG C + +I EFM G+L Y+ + ++ + + +A I+ +
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAM 124
Query: 318 EYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIA 377
EYL + +H D+ N + E+ K++DFGL++ +++ + + + A
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 180
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQ 437
PE + S KSDV+++G+++ E+ + + S +Y+ +E +Y +
Sbjct: 181 PESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ------VYELLEKDYRME 232
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
E+ E+ + C Q +P DRPS ++ + E
Sbjct: 233 RPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 267
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 129/282 (45%), Gaps = 24/282 (8%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRL-VAVKVMKNLKDNGEEFINEVASISRTSH 257
++ R + KLG G Y +VY+G L VAVK +K EEF+ E A + H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 258 VNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
N+V LG C + +I EFM G+L Y+ + ++ + + +A I+ +
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAM 124
Query: 318 EYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIA 377
EYL + +H D+ N + E+ K++DFGL++ +++ + + + A
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 180
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQ 437
PE + S KSDV+++G+++ E+ + + S +Y+ +E +Y +
Sbjct: 181 PESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ------VYELLEKDYRME 232
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
E+ E+ + C Q +P DRPS ++ + E
Sbjct: 233 RPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 267
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 134/295 (45%), Gaps = 26/295 (8%)
Query: 188 GSLAPKRFSYS--DVRRMTKSFSDKLGQGGYADVYKGTLPDGRL-VAVKVMKNLKDNGEE 244
G++ P +Y ++ R + KLG G Y +VY+G L VAVK +K EE
Sbjct: 1 GAMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 60
Query: 245 FINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWR 304
F+ E A + H N+V LG C + +I EFM G+L Y+ + ++ +
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE----CNRQEVNAV 116
Query: 305 TVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFI 364
+ +A I+ +EYL + +H D+ N + E+ K++DFGL++ ++
Sbjct: 117 VLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXT 172
Query: 365 SMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPN 424
+ + + APE + S KSDV+++G+++ E+ + + S
Sbjct: 173 AHAGAKFPIKWTAPESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----- 225
Query: 425 AIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
+Y+ +E +Y + E+ E+ + C Q +P DRPS ++ + E
Sbjct: 226 -VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 272
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 129/282 (45%), Gaps = 24/282 (8%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRL-VAVKVMKNLKDNGEEFINEVASISRTSH 257
++ R + KLG G Y +VY+G L VAVK +K EEF+ E A + H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 258 VNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
N+V LG C + +I EFM G+L Y+ + ++ + + +A I+ +
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRE----CNRQEVSAVVLLYMATQISSAM 124
Query: 318 EYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIA 377
EYL + +H D+ N + E+ K++DFGL++ +++ + + + A
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 180
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQ 437
PE + S KSDV+++G+++ E+ + + S +Y+ +E +Y +
Sbjct: 181 PESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ------VYELLEKDYRME 232
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
E+ E+ + C Q +P DRPS ++ + E
Sbjct: 233 RPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 267
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 24/290 (8%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRL-VAVKVMKNLKDNGEEFINEVASISRTSH 257
++ R + KLG G Y +VY+G L VAVK +K EEF+ E A + H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 258 VNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
N+V LG C + +I EFM G+L Y+ + ++ + + +A I+ +
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE----CNRQEVSAVVLLYMATQISSAM 124
Query: 318 EYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIA 377
EYL + +H D+ N + E+ K++DFGL++ +++ + + + A
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 180
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQ 437
PE + S KSDV+++G+++ E+ + + S +Y+ +E +Y +
Sbjct: 181 PESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ------VYELLEKDYRME 232
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSIENLQI 487
E+ E+ + C Q +P DRPS ++ + E + I
Sbjct: 233 RPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFETMFQESSI 275
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 24/290 (8%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRL-VAVKVMKNLKDNGEEFINEVASISRTSH 257
++ R + KLG G Y +VY+G L VAVK +K EEF+ E A + H
Sbjct: 22 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 81
Query: 258 VNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
N+V LG C + +I EFM G+L Y+ + ++ + + +A I+ +
Sbjct: 82 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAM 137
Query: 318 EYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIA 377
EYL + +H D+ N + E+ K++DFGL++ +++ + + + A
Sbjct: 138 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 193
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQ 437
PE + S KSDV+++G+++ E+ + + S +Y+ +E +Y +
Sbjct: 194 PESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ------VYELLEKDYRME 245
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSIENLQI 487
E+ E+ + C Q +P DRPS ++ + E + I
Sbjct: 246 RPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFETMFQESSI 288
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 129/282 (45%), Gaps = 24/282 (8%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRL-VAVKVMKNLKDNGEEFINEVASISRTSH 257
++ R + KLG G Y +VY+G L VAVK +K EEF+ E A + H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 258 VNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
N+V LG C + +I EFM G+L Y+ + ++ + + +A I+ +
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRE----CNRQEVSAVVLLYMATQISSAM 124
Query: 318 EYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIA 377
EYL + +H D+ N + E+ K++DFGL++ +++ + + + A
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 180
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQ 437
PE + S KSDV+++G+++ E+ + + S +Y+ +E +Y +
Sbjct: 181 PESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ------VYELLEKDYRME 232
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
E+ E+ + C Q +P DRPS ++ + E
Sbjct: 233 RPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 24/290 (8%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRL-VAVKVMKNLKDNGEEFINEVASISRTSH 257
++ R + KLG G Y +VY+G L VAVK +K EEF+ E A + H
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 68
Query: 258 VNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
N+V LG C + +I EFM G+L Y+ + ++ + + +A I+ +
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE----CNRQEVSAVVLLYMATQISSAM 124
Query: 318 EYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIA 377
EYL + +H D+ N + E+ K++DFGL++ +++ + + + A
Sbjct: 125 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 180
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQ 437
PE + S KSDV+++G+++ E+ + + S +Y+ +E +Y +
Sbjct: 181 PESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ------VYELLEKDYRME 232
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSIENLQI 487
E+ E+ + C Q +P DRPS ++ + E + I
Sbjct: 233 RPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFETMFQESSI 275
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 24/290 (8%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRL-VAVKVMKNLKDNGEEFINEVASISRTSH 257
++ R + KLG G Y +VY+G L VAVK +K EEF+ E A + H
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 69
Query: 258 VNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
N+V LG C + +I EFM G+L Y+ + ++ + + +A I+ +
Sbjct: 70 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAM 125
Query: 318 EYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIA 377
EYL + +H D+ N + E+ K++DFGL++ +++ + + + A
Sbjct: 126 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTA 181
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQ 437
PE + S KSDV+++G+++ E+ + + S +Y+ +E +Y +
Sbjct: 182 PESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ------VYELLEKDYRME 233
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSIENLQI 487
E+ E+ + C Q +P DRPS ++ + E + I
Sbjct: 234 RPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFETMFQESSI 276
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 130/282 (46%), Gaps = 24/282 (8%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRL-VAVKVMKNLKDNGEEFINEVASISRTSH 257
++ R + KLG G + +VY+G L VAVK +K EEF+ E A + H
Sbjct: 7 EMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 66
Query: 258 VNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
N+V LG C + +I EFM G+L Y+ + ++ + + +A I+ +
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE----CNRQEVSAVVLLYMATQISSAM 122
Query: 318 EYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIA 377
EYL + +H D+ N + E+ K++DFGL++ ++ + + + A
Sbjct: 123 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTA 178
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQ 437
PE + S KSDV+++G+++ E+ A +S P+ +Y+ +E +Y +
Sbjct: 179 PESLA--YNKFSIKSDVWAFGVLLWEI------ATYGMSPYPGIDPSQVYELLEKDYRME 230
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
E+ E+ + C Q +P DRPS ++ + E
Sbjct: 231 RPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 265
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 107/210 (50%), Gaps = 19/210 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L + EF++E ++ H ++V
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRG 323
LG C + L+ + MP+G L +Y+++H+ + G + L V IA+G+ YL
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLL-----LNWCVQIAKGMMYLEER 159
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCR 383
R+VH D+ N+ + KI+DFGLA+ E E + + ++A E C
Sbjct: 160 ---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE--CI 214
Query: 384 HFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
H+ +H+SDV+SYG+ I E M G K D
Sbjct: 215 HYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 108/211 (51%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L + EF++E ++ H ++V
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTL-EWRTVYQIAVGIARGLEYLHR 322
LG C + L+ + MP+G L +Y+++H+ + G + L W V IA+G+ YL
Sbjct: 83 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLEE 135
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
R+VH D+ N+ + KI+DFGLA+ E E + + ++A E C
Sbjct: 136 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALE--C 190
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
H+ +H+SDV+SYG+ I E M G K D
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 15/207 (7%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEE---FINEVASISRTSHVNIVP 262
+ ++G G + VYKG VAVK++ ++ F NEV + +T HVNI+
Sbjct: 11 TVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 263 FLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
F+G+ K + A++ ++ SL +++ E+ E + IA A+G++YLH
Sbjct: 69 FMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHA 122
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF- 381
I+H D+K +NI L ED KI DFGLA + + G+ ++APEV
Sbjct: 123 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
+ S +SDVY++G++++E++ G+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 127/281 (45%), Gaps = 40/281 (14%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLG 265
+F ++G G + V+ G + VA+K ++ + E+FI E + + SH +V G
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 72
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
C E+ L++EFM +G L Y+ TL + + + G+ YL C
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC- 126
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
++H D+ N + E+ K+SDFG+ + + + S T+ + +PEVF F
Sbjct: 127 --VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF--SF 181
Query: 386 GGVSHKSDVYSYGMMIHEMVI-------GRKNADVKVSCSSEYFPNAIYK-QIETEYDFQ 437
S KSDV+S+G+++ E+ R N++V S+ + +YK ++ + + +Q
Sbjct: 182 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF---RLYKPRLASTHVYQ 238
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
+ C + P DRP+ ++++ L
Sbjct: 239 IMNH------------------CWRERPEDRPAFSRLLRQL 261
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 111/216 (51%), Gaps = 12/216 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
+++R + +LG G + V G VAVK++K + +EF E ++ + SH
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHP 63
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V F G C ++ ++ E++ NG L Y+ H + LE + ++ + G+
Sbjct: 64 KLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSH-----GKGLEPSQLLEMCYDVCEGMA 118
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
+L + + +H D+ N +D D C K+SDFG+ + + ++S + T+ + AP
Sbjct: 119 FLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYV-LDDQYVSSVGTKFPVKWSAP 174
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMV-IGRKNADV 413
EVF H+ S KSDV+++G+++ E+ +G+ D+
Sbjct: 175 EVF--HYFKYSSKSDVWAFGILMWEVFSLGKMPYDL 208
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 127/281 (45%), Gaps = 40/281 (14%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLG 265
+F ++G G + V+ G + VA+K ++ + E+FI E + + SH +V G
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
C E+ L++EFM +G L Y+ TL + + + G+ YL C
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC- 123
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
++H D+ N + E+ K+SDFG+ + + + S T+ + +PEVF F
Sbjct: 124 --VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF--SF 178
Query: 386 GGVSHKSDVYSYGMMIHEMVI-------GRKNADVKVSCSSEYFPNAIYK-QIETEYDFQ 437
S KSDV+S+G+++ E+ R N++V S+ + +YK ++ + + +Q
Sbjct: 179 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF---RLYKPRLASTHVYQ 235
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
+ C + P DRP+ ++++ L
Sbjct: 236 IMNH------------------CWKERPEDRPAFSRLLRQL 258
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 127/281 (45%), Gaps = 40/281 (14%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLG 265
+F ++G G + V+ G + VA+K ++ + E+FI E + + SH +V G
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 67
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
C E+ L++EFM +G L Y+ TL + + + G+ YL C
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC- 121
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
++H D+ N + E+ K+SDFG+ + + + S T+ + +PEVF F
Sbjct: 122 --VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF--SF 176
Query: 386 GGVSHKSDVYSYGMMIHEMVI-------GRKNADVKVSCSSEYFPNAIYK-QIETEYDFQ 437
S KSDV+S+G+++ E+ R N++V S+ + +YK ++ + + +Q
Sbjct: 177 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF---RLYKPRLASTHVYQ 233
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
+ C + P DRP+ ++++ L
Sbjct: 234 IMNH------------------CWKERPEDRPAFSRLLRQL 256
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 129/282 (45%), Gaps = 24/282 (8%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRL-VAVKVMKNLKDNGEEFINEVASISRTSH 257
++ R + KLG G Y +VY+G L VAVK +K EEF+ E A + H
Sbjct: 216 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 275
Query: 258 VNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
N+V LG C + +I EFM G+L Y+ + ++ + + +A I+ +
Sbjct: 276 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE----CNRQEVSAVVLLYMATQISSAM 331
Query: 318 EYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIA 377
EYL + +H ++ N + E+ K++DFGL++ +++ + + + A
Sbjct: 332 EYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 387
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQ 437
PE + S KSDV+++G+++ E+ + + S +Y+ +E +Y +
Sbjct: 388 PESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ------VYELLEKDYRME 439
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
E+ E+ + C Q +P DRPS ++ + E
Sbjct: 440 RPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 474
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 15/207 (7%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEE---FINEVASISRTSHVNIVP 262
+ ++G G + VYKG VAVK++ ++ F NEV + +T HVNI+
Sbjct: 39 TVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 96
Query: 263 FLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
F+G+ K + A++ ++ SL +++ E+ E + IA A+G++YLH
Sbjct: 97 FMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHA 150
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF- 381
I+H D+K +NI L ED KI DFGLA + + G+ ++APEV
Sbjct: 151 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
+ S +SDVY++G++++E++ G+
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 15/207 (7%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEE---FINEVASISRTSHVNIVP 262
+ ++G G + VYKG VAVK++ ++ F NEV + +T HVNI+
Sbjct: 31 TVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 88
Query: 263 FLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
F+G+ K + A++ ++ SL +++ E+ E + IA A+G++YLH
Sbjct: 89 FMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHA 142
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF- 381
I+H D+K +NI L ED KI DFGLA + + G+ ++APEV
Sbjct: 143 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 199
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
+ S +SDVY++G++++E++ G+
Sbjct: 200 MQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 129/282 (45%), Gaps = 24/282 (8%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRL-VAVKVMKNLKDNGEEFINEVASISRTSH 257
++ R + KLG G Y +VY+G L VAVK +K EEF+ E A + H
Sbjct: 255 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 314
Query: 258 VNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
N+V LG C + +I EFM G+L Y+ + ++ + + +A I+ +
Sbjct: 315 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAM 370
Query: 318 EYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIA 377
EYL + +H ++ N + E+ K++DFGL++ +++ + + + A
Sbjct: 371 EYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 426
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQ 437
PE + S KSDV+++G+++ E+ + + S +Y+ +E +Y +
Sbjct: 427 PESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ------VYELLEKDYRME 478
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
E+ E+ + C Q +P DRPS ++ + E
Sbjct: 479 RPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 513
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 128/282 (45%), Gaps = 24/282 (8%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRL-VAVKVMKNLKDNGEEFINEVASISRTSH 257
++ R + KLG G Y +VY+G L VAVK +K EEF+ E A + H
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 69
Query: 258 VNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
N+V LG C + +I EFM G+L Y+ + ++ + + +A I+ +
Sbjct: 70 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAM 125
Query: 318 EYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIA 377
EYL + +H D+ N + E+ K++DFGL++ ++ + + + A
Sbjct: 126 EYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTA 181
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQ 437
PE + S KSDV+++G+++ E+ + + S +Y+ +E +Y +
Sbjct: 182 PESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ------VYELLEKDYRME 233
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
E+ E+ + C Q +P DRPS ++ + E
Sbjct: 234 RPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 268
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 129/282 (45%), Gaps = 24/282 (8%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRL-VAVKVMKNLKDNGEEFINEVASISRTSH 257
++ R + KLG G Y +VY+G L VAVK +K EEF+ E A + H
Sbjct: 213 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 272
Query: 258 VNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
N+V LG C + +I EFM G+L Y+ + ++ + + +A I+ +
Sbjct: 273 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE----CNRQEVNAVVLLYMATQISSAM 328
Query: 318 EYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIA 377
EYL + +H ++ N + E+ K++DFGL++ +++ + + + A
Sbjct: 329 EYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 384
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQ 437
PE + S KSDV+++G+++ E+ + + S +Y+ +E +Y +
Sbjct: 385 PESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ------VYELLEKDYRME 436
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
E+ E+ + C Q +P DRPS ++ + E
Sbjct: 437 RPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 471
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 127/281 (45%), Gaps = 40/281 (14%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLG 265
+F ++G G + V+ G + VA+K +K + ++FI E + + SH +V G
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYG 89
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
C E+ L++EFM +G L Y+ TL + + + G+ YL C
Sbjct: 90 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC- 143
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
++H D+ N + E+ K+SDFG+ + + + S T+ + +PEVF F
Sbjct: 144 --VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF--SF 198
Query: 386 GGVSHKSDVYSYGMMIHEMVI-------GRKNADVKVSCSSEYFPNAIYK-QIETEYDFQ 437
S KSDV+S+G+++ E+ R N++V S+ + +YK ++ + + +Q
Sbjct: 199 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF---RLYKPRLASTHVYQ 255
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
+ C + P DRP+ ++++ L
Sbjct: 256 IMNH------------------CWKERPEDRPAFSRLLRQL 278
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 107/207 (51%), Gaps = 15/207 (7%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEE---FINEVASISRTSHVNIVP 262
+ ++G G + VYKG VAVK++ ++ F NEV + +T HVNI+
Sbjct: 11 TVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 263 FLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
F+G+ K + A++ ++ SL +++ E+ E + IA A+G++YLH
Sbjct: 69 FMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHA 122
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF- 381
I+H D+K +NI L ED KI DFGLA + G+ ++APEV
Sbjct: 123 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
+ S +SDVY++G++++E++ G+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 107/207 (51%), Gaps = 15/207 (7%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEE---FINEVASISRTSHVNIVP 262
+ ++G G + VYKG VAVK++ ++ F NEV + +T HVNI+
Sbjct: 16 TVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 73
Query: 263 FLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
F+G+ K + A++ ++ SL +++ E+ E + IA A+G++YLH
Sbjct: 74 FMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHA 127
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF- 381
I+H D+K +NI L ED KI DFGLA + G+ ++APEV
Sbjct: 128 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
+ S +SDVY++G++++E++ G+
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 107/207 (51%), Gaps = 15/207 (7%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEE---FINEVASISRTSHVNIVP 262
+ ++G G + VYKG VAVK++ ++ F NEV + +T HVNI+
Sbjct: 13 TVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 70
Query: 263 FLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
F+G+ K + A++ ++ SL +++ E+ E + IA A+G++YLH
Sbjct: 71 FMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHA 124
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF- 381
I+H D+K +NI L ED KI DFGLA + G+ ++APEV
Sbjct: 125 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 181
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
+ S +SDVY++G++++E++ G+
Sbjct: 182 MQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 107/207 (51%), Gaps = 15/207 (7%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEE---FINEVASISRTSHVNIVP 262
+ ++G G + VYKG VAVK++ ++ F NEV + +T HVNI+
Sbjct: 16 TVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 73
Query: 263 FLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
F+G+ K + A++ ++ SL +++ E+ E + IA A+G++YLH
Sbjct: 74 FMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHA 127
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF- 381
I+H D+K +NI L ED KI DFGLA + G+ ++APEV
Sbjct: 128 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
+ S +SDVY++G++++E++ G+
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 107/207 (51%), Gaps = 15/207 (7%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEE---FINEVASISRTSHVNIVP 262
+ ++G G + VYKG VAVK++ ++ F NEV + +T HVNI+
Sbjct: 38 TVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 95
Query: 263 FLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
F+G+ K + A++ ++ SL +++ E+ E + IA A+G++YLH
Sbjct: 96 FMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHA 149
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF- 381
I+H D+K +NI L ED KI DFGLA + G+ ++APEV
Sbjct: 150 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 206
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
+ S +SDVY++G++++E++ G+
Sbjct: 207 MQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 107/207 (51%), Gaps = 15/207 (7%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEE---FINEVASISRTSHVNIVP 262
+ ++G G + VYKG VAVK++ ++ F NEV + +T HVNI+
Sbjct: 39 TVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 96
Query: 263 FLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
F+G+ K + A++ ++ SL +++ E+ E + IA A+G++YLH
Sbjct: 97 FMGYS-TKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHA 150
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF- 381
I+H D+K +NI L ED KI DFGLA + G+ ++APEV
Sbjct: 151 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
+ S +SDVY++G++++E++ G+
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 126/281 (44%), Gaps = 40/281 (14%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLG 265
+F ++G G + V+ G + VA+K ++ + E+FI E + + SH +V G
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 70
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
C E+ L+ EFM +G L Y+ TL + + + G+ YL C
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEAC- 124
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
++H D+ N + E+ K+SDFG+ + + + S T+ + +PEVF F
Sbjct: 125 --VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF--SF 179
Query: 386 GGVSHKSDVYSYGMMIHEMVI-------GRKNADVKVSCSSEYFPNAIYK-QIETEYDFQ 437
S KSDV+S+G+++ E+ R N++V S+ + +YK ++ + + +Q
Sbjct: 180 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF---RLYKPRLASTHVYQ 236
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
+ C + P DRP+ ++++ L
Sbjct: 237 IMNH------------------CWRERPEDRPAFSRLLRQL 259
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 129/289 (44%), Gaps = 34/289 (11%)
Query: 211 LGQGGYADVYKGTLP--DGR--LVAVKVMKNLKDNG-----EEFINEVASISRTSHVNIV 261
LG+G + V +G L DG VAVK MK DN EEF++E A + SH N++
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMK--LDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 262 PFLGFCYEKK-----KRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARG 316
LG C E K +I FM G L Y+ G + + +T+ + V IA G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 317 LEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYI 376
+EYL N +H D+ N L +D ++DFGL+K+ + + + +I
Sbjct: 160 MEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
A E + KSDV+++G+ + E+ +P Q YD+
Sbjct: 217 AIESLADRV--YTSKSDVWAFGVTMWEIATRGMTP----------YPGV---QNHEMYDY 261
Query: 437 QLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSIENL 485
L G ++ ++ ++ + C +T P DRP+ + + LE +E+L
Sbjct: 262 LLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 112/230 (48%), Gaps = 17/230 (7%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
++ R + KLG G + +V+ G + VAVK +K + + F+ E + H
Sbjct: 8 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD 67
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V +++ +I EFM GSL ++ +S G + L + + + IA G+
Sbjct: 68 KLVRLYAVVTKEEPIYIITEFMAKGSLLDFL---KSDEGGKVLLPKLI-DFSAQIAEGMA 123
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
Y+ R +H D++ N+ + E KI+DFGLA+ E E + + + + AP
Sbjct: 124 YIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWTAP 179
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMVI-------GRKNADVKVSCSSEY 421
E +FG + KS+V+S+G++++E+V GR NADV + S Y
Sbjct: 180 EAI--NFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGY 227
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 111/230 (48%), Gaps = 17/230 (7%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
++ R + +LG G + +V+ G + VAVK +K + + F+ E + H
Sbjct: 9 EIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD 68
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V ++ +I E+M GSL ++ +S G + L + + + IA G+
Sbjct: 69 KLVRLYAVVTREEPIYIITEYMAKGSLLDFL---KSDEGGKVLLPKLI-DFSAQIAEGMA 124
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
Y+ R +H D++ N+ + E KI+DFGLA+ E E + + + + AP
Sbjct: 125 YIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWTAP 180
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMVI-------GRKNADVKVSCSSEY 421
E +FG + KSDV+S+G++++E+V GR NADV + S Y
Sbjct: 181 EAI--NFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGY 228
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 15/207 (7%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEE---FINEVASISRTSHVNIVP 262
+ ++G G + VYKG VAVK++ ++ F NEV + +T HVNI+
Sbjct: 11 TVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 263 FLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
F+G+ + A++ ++ SL +++ E+ E + IA A+G++YLH
Sbjct: 69 FMGYS-TAPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHA 122
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF- 381
I+H D+K +NI L ED KI DFGLA + G+ ++APEV
Sbjct: 123 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
+ S +SDVY++G++++E++ G+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 124/282 (43%), Gaps = 24/282 (8%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRL-VAVKVMKNLKDNGEEFINEVASISRTSH 257
++ R + KLG G Y +VY G L VAVK +K EEF+ E A + H
Sbjct: 28 EMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH 87
Query: 258 VNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
N+V LG C + ++ E+MP G+L Y+ N + +Y +A I+ +
Sbjct: 88 PNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL---RECNREEVTAVVLLY-MATQISSAM 143
Query: 318 EYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIA 377
EYL + +H D+ N + E+ K++DFGL++ +++ + + + A
Sbjct: 144 EYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTA 199
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQ 437
PE + S KSDV+++G+++ E+ + +P Q+ YD
Sbjct: 200 PESLA--YNTFSIKSDVWAFGVLLWEI----------ATYGMSPYPGIDLSQV---YDLL 244
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
G E+ + K+ + C + P DRPS + + E
Sbjct: 245 EKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFE 286
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 126/281 (44%), Gaps = 40/281 (14%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLG 265
+F ++G G + V+ G + VA+K ++ + E+FI E + + SH +V G
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
C E+ L++EFM +G L Y+ TL + + + G+ YL
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCEGMAYLEEA-- 122
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
++H D+ N + E+ K+SDFG+ + + + S T+ + +PEVF F
Sbjct: 123 -SVIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF--SF 178
Query: 386 GGVSHKSDVYSYGMMIHEMVI-------GRKNADVKVSCSSEYFPNAIYK-QIETEYDFQ 437
S KSDV+S+G+++ E+ R N++V S+ + +YK ++ + + +Q
Sbjct: 179 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF---RLYKPRLASTHVYQ 235
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
+ C + P DRP+ ++++ L
Sbjct: 236 IMNH------------------CWKERPEDRPAFSRLLRQL 258
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 27/220 (12%)
Query: 207 FSDKLGQGGYADVYKGTL-PDGRLVAVKVMKNLKDNGE--------EFINEVASISRTSH 257
+ ++G+GG+ V+KG L D +VA+K + GE EF EV +S +H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 258 VNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
NIV G + + ++ EF+P G L + D ++W ++ + IA G+
Sbjct: 83 PNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDK-----AHPIKWSVKLRLMLDIALGI 135
Query: 318 EYLHRGCNIRIVHLDIKPHNI---RLDED--FCPKISDFGLAKQTEKKESFISMLDTRGT 372
EY+ + N IVH D++ NI LDE+ C K++DFGL++Q S S+ G
Sbjct: 136 EYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ-----SVHSVSGLLGN 189
Query: 373 AGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNAD 412
++APE + K+D YS+ M+++ ++ G D
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 27/220 (12%)
Query: 207 FSDKLGQGGYADVYKGTL-PDGRLVAVKVMKNLKDNGE--------EFINEVASISRTSH 257
+ ++G+GG+ V+KG L D +VA+K + GE EF EV +S +H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 258 VNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
NIV G + + ++ EF+P G L + D ++W ++ + IA G+
Sbjct: 83 PNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDK-----AHPIKWSVKLRLMLDIALGI 135
Query: 318 EYLHRGCNIRIVHLDIKPHNI---RLDED--FCPKISDFGLAKQTEKKESFISMLDTRGT 372
EY+ + N IVH D++ NI LDE+ C K++DFG ++Q S S+ G
Sbjct: 136 EYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ-----SVHSVSGLLGN 189
Query: 373 AGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNAD 412
++APE + K+D YS+ M+++ ++ G D
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 27/220 (12%)
Query: 207 FSDKLGQGGYADVYKGTL-PDGRLVAVKVMKNLKDNGE--------EFINEVASISRTSH 257
+ ++G+GG+ V+KG L D +VA+K + GE EF EV +S +H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 258 VNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
NIV G + + ++ EF+P G L + D ++W ++ + IA G+
Sbjct: 83 PNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDK-----AHPIKWSVKLRLMLDIALGI 135
Query: 318 EYLHRGCNIRIVHLDIKPHNI---RLDED--FCPKISDFGLAKQTEKKESFISMLDTRGT 372
EY+ + N IVH D++ NI LDE+ C K++DF L++Q S S+ G
Sbjct: 136 EYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQ-----SVHSVSGLLGN 189
Query: 373 AGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNAD 412
++APE + K+D YS+ M+++ ++ G D
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 11/207 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
++ R + KLGQG + +V+ GT VA+K +K + E F+ E + + H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V E+ ++ E+M GSL ++ + GK L + +A IA G+
Sbjct: 240 KLVQLYAVVSEEPI-YIVTEYMSKGSLLDFL---KGETGK-YLRLPQLVDMAAQIASGMA 294
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
Y+ R + VH D++ NI + E+ K++DFGLA+ E E + + + + AP
Sbjct: 295 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 350
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMV 405
E +G + KSDV+S+G+++ E+
Sbjct: 351 EAAL--YGRFTIKSDVWSFGILLTELT 375
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 11/207 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
++ R + KLGQG + +V+ GT VA+K +K + E F+ E + + H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V E+ ++ E+M GSL ++ + GK L + +A IA G+
Sbjct: 240 KLVQLYAVVSEEPI-YIVTEYMSKGSLLDFL---KGETGK-YLRLPQLVDMAAQIASGMA 294
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
Y+ R + VH D++ NI + E+ K++DFGLA+ E E + + + + AP
Sbjct: 295 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 350
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMV 405
E +G + KSDV+S+G+++ E+
Sbjct: 351 EAAL--YGRFTIKSDVWSFGILLTELT 375
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 11/206 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
++ R + KLGQG + +V+ GT VA+K +K + E F+ E + + H
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 66
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V E+ ++ E+M GSL ++ + GK L + +A IA G+
Sbjct: 67 KLVQLYAVVSEEPI-YIVTEYMSKGSLLDFL---KGETGK-YLRLPQLVDMAAQIASGMA 121
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
Y+ R + VH D++ NI + E+ K++DFGLA+ E E + + + + AP
Sbjct: 122 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 177
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEM 404
E +G + KSDV+S+G+++ E+
Sbjct: 178 EAAL--YGRFTIKSDVWSFGILLTEL 201
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 11/207 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
++ R + KLGQG + +V+ GT VA+K +K + E F+ E + + H
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 322
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V E+ ++ E+M GSL ++ + GK L + +A IA G+
Sbjct: 323 KLVQLYAVVSEEPI-YIVTEYMSKGSLLDFL---KGETGK-YLRLPQLVDMAAQIASGMA 377
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
Y+ R + VH D++ NI + E+ K++DFGLA+ E E + + + + AP
Sbjct: 378 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 433
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMV 405
E +G + KSDV+S+G+++ E+
Sbjct: 434 EAAL--YGRFTIKSDVWSFGILLTELT 458
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 135/293 (46%), Gaps = 37/293 (12%)
Query: 207 FSDKLGQGGYADVYKGTLPDGRL---VAVKVMKNL--KDNGEEFINEVASISRTSH-VNI 260
F D +G+G + V K + L A+K MK KD+ +F E+ + + H NI
Sbjct: 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHE----------SSNGKRTLEWRTVYQIA 310
+ LG C + L E+ P+G+L ++ +++ TL + + A
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 311 VGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR 370
+ARG++YL + + +H D+ NI + E++ KI+DFGL++ +E ++ R
Sbjct: 149 ADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGR 202
Query: 371 GTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQI 430
++A E ++ + SDV+SYG+++ E+V ++C+ +Y+++
Sbjct: 203 LPVRWMAIESL--NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE------LYEKL 254
Query: 431 ETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSIE 483
Y + +E ++ ++ C + P +RPS +++ L +E
Sbjct: 255 PQGYRLEKPLNCDDEVYDLMRQ-------CWREKPYERPSFAQILVSLNRMLE 300
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 13/200 (6%)
Query: 207 FSDKLGQGGYADVYKGTL-PDGRLVAVKVMKNL--KDNGEEFINEVASISRTSHVNIVPF 263
+++G+G + +V+ G L D LVAVK + D +F+ E + + SH NIV
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRG 323
+G C +K+ ++ E + G ++ + G R L +T+ Q+ A G+EYL
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFL----RTEGAR-LRVKTLLQMVGDAAAGMEYLESK 232
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCR 383
C I H D+ N + E KISDFG++++ S + + APE
Sbjct: 233 CCI---HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEAL-- 287
Query: 384 HFGGVSHKSDVYSYGMMIHE 403
++G S +SDV+S+G+++ E
Sbjct: 288 NYGRYSSESDVWSFGILLWE 307
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 135/293 (46%), Gaps = 37/293 (12%)
Query: 207 FSDKLGQGGYADVYKGTLPDGRL---VAVKVMKNL--KDNGEEFINEVASISRTSH-VNI 260
F D +G+G + V K + L A+K MK KD+ +F E+ + + H NI
Sbjct: 19 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHE----------SSNGKRTLEWRTVYQIA 310
+ LG C + L E+ P+G+L ++ +++ TL + + A
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 311 VGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR 370
+ARG++YL + + +H D+ NI + E++ KI+DFGL++ +E ++ R
Sbjct: 139 ADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGR 192
Query: 371 GTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQI 430
++A E ++ + SDV+SYG+++ E+V ++C+ +Y+++
Sbjct: 193 LPVRWMAIESL--NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE------LYEKL 244
Query: 431 ETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSIE 483
Y + +E ++ ++ C + P +RPS +++ L +E
Sbjct: 245 PQGYRLEKPLNCDDEVYDLMRQ-------CWREKPYERPSFAQILVSLNRMLE 290
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 11/206 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
++ R + KLGQG + +V+ GT VA+K +K + E F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V E+ +I E+M GSL ++ + GK L + +A IA G+
Sbjct: 74 KLVQLYAVVSEEPIYIVI-EYMSKGSLLDFL---KGEMGK-YLRLPQLVDMAAQIASGMA 128
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
Y+ R + VH D++ NI + E+ K++DFGLA+ E E + + + + AP
Sbjct: 129 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 184
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEM 404
E +G + KSDV+S+G+++ E+
Sbjct: 185 EAAL--YGRFTIKSDVWSFGILLTEL 208
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 11/206 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
++ R + KLGQG + +V+ GT VA+K +K + E F+ E + + H
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 63
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V E+ ++ E+M GSL ++ + GK L + +A IA G+
Sbjct: 64 KLVQLYAVVSEEPI-XIVTEYMSKGSLLDFL---KGETGK-YLRLPQLVDMAAQIASGMA 118
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
Y+ R + VH D++ NI + E+ K++DFGLA+ E E + + + AP
Sbjct: 119 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEX-TARQGAKFPIKWTAP 174
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEM 404
E +G + KSDV+S+G+++ E+
Sbjct: 175 EAAL--YGRFTIKSDVWSFGILLTEL 198
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 11/207 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
++ R + KLGQG + +V+ GT VA+K +K + E F+ E + + H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V E+ ++ E+M GSL ++ + GK L + +A IA G+
Sbjct: 240 KLVQLYAVVSEEPI-YIVGEYMSKGSLLDFL---KGETGK-YLRLPQLVDMAAQIASGMA 294
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
Y+ R + VH D++ NI + E+ K++DFGLA+ E E + + + + AP
Sbjct: 295 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 350
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMV 405
E +G + KSDV+S+G+++ E+
Sbjct: 351 EAAL--YGRFTIKSDVWSFGILLTELT 375
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
++ R + +LG G + +V+ GT VA+K +K + E F+ E + + H
Sbjct: 5 EIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHD 64
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V E+ ++ E+M GSL ++ D E R L+ + +A +A G+
Sbjct: 65 KLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKDGEG----RALKLPNLVDMAAQVAAGMA 119
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
Y+ R + +H D++ NI + KI+DFGLA+ E E + + + AP
Sbjct: 120 YIER---MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEX-TARQGAKFPIKWTAP 175
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMV 405
E +G + KSDV+S+G+++ E+V
Sbjct: 176 EAAL--YGRFTIKSDVWSFGILLTELV 200
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 11/206 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
++ R + KLGQG + +V+ GT VA+K +K + E F+ E + + H
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 62
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V E+ ++ E+M GSL ++ + GK L + +A IA G+
Sbjct: 63 KLVQLYAVVSEEPI-YIVTEYMSKGSLLDFL---KGEMGK-YLRLPQLVDMAAQIASGMA 117
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
Y+ R + VH D++ NI + E+ K++DFGLA+ E E + + + + AP
Sbjct: 118 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 173
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEM 404
E +G + KSDV+S+G+++ E+
Sbjct: 174 EAAL--YGRFTIKSDVWSFGILLTEL 197
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 13/200 (6%)
Query: 207 FSDKLGQGGYADVYKGTL-PDGRLVAVKVMKNL--KDNGEEFINEVASISRTSHVNIVPF 263
+++G+G + +V+ G L D LVAVK + D +F+ E + + SH NIV
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRG 323
+G C +K+ ++ E + G ++ + G R L +T+ Q+ A G+EYL
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFL----RTEGAR-LRVKTLLQMVGDAAAGMEYLESK 232
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCR 383
C I H D+ N + E KISDFG++++ S + + APE
Sbjct: 233 CCI---HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEAL-- 287
Query: 384 HFGGVSHKSDVYSYGMMIHE 403
++G S +SDV+S+G+++ E
Sbjct: 288 NYGRYSSESDVWSFGILLWE 307
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 11/206 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
++ R + KLGQG + +V+ GT VA+K +K + E F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHE 73
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V E+ ++ E+M GSL ++ + GK L + +A IA G+
Sbjct: 74 KLVQLYAVVSEEPI-YIVTEYMSKGSLLDFL---KGEMGK-YLRLPQLVDMAAQIASGMA 128
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
Y+ R + VH D++ NI + E+ K++DFGLA+ E E + + + + AP
Sbjct: 129 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 184
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEM 404
E +G + KSDV+S+G+++ E+
Sbjct: 185 EAAL--YGRFTIKSDVWSFGILLTEL 208
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 11/206 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
++ R + KLGQG + +V+ GT VA+K +K + E F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V E+ ++ E+M GSL ++ + GK L + +A IA G+
Sbjct: 74 KLVQLYAVVSEEPI-YIVTEYMSKGSLLDFL---KGEMGK-YLRLPQLVDMAAQIASGMA 128
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
Y+ R + VH D++ NI + E+ K++DFGLA+ E E + + + + AP
Sbjct: 129 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 184
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEM 404
E +G + KSDV+S+G+++ E+
Sbjct: 185 EAAL--YGRFTIKSDVWSFGILLTEL 208
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 11/206 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
++ R + KLGQG + +V+ GT VA+K +K + E F+ E + + H
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 64
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V E+ ++ E+M GSL ++ + GK L + +A IA G+
Sbjct: 65 KLVQLYAVVSEEPI-YIVTEYMSKGSLLDFL---KGEMGK-YLRLPQLVDMAAQIASGMA 119
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
Y+ R + VH D++ NI + E+ K++DFGLA+ E E + + + + AP
Sbjct: 120 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 175
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEM 404
E +G + KSDV+S+G+++ E+
Sbjct: 176 EAAL--YGRFTIKSDVWSFGILLTEL 199
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 112/229 (48%), Gaps = 27/229 (11%)
Query: 209 DKLGQGGYADVYKGTLPDGRLVAVKVM--------KNLKDNGEEFINEVASISRTSHVNI 260
DKLG GG + VY L + ++ +KV + ++ + F EV + S+ SH NI
Sbjct: 17 DKLGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNI 73
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
V + E L+ E++ +L +YI H L T I G+++
Sbjct: 74 VSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH------GPLSVDTAINFTNQILDGIKHA 127
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
H ++RIVH DIKP NI +D + KI DFG+AK + S GT Y +PE
Sbjct: 128 H---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET-SLTQTNHVLGTVQYFSPE- 182
Query: 381 FCRHFGGVSHK-SDVYSYGMMIHEMVIGRK--NADVKVSCSSEYFPNAI 426
+ G + + +D+YS G++++EM++G N + VS + ++ +++
Sbjct: 183 --QAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSV 229
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNG-----EEFINEVASISRTSHVNI 260
+ + +G GG+ VY+ G VAVK ++ D E E + H NI
Sbjct: 10 TLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNI 68
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ G C ++ L+ EF G L++ + +GKR + AV IARG+ YL
Sbjct: 69 IALRGVCLKEPNLCLVMEFARGGPLNRVL------SGKRIPP-DILVNWAVQIARGMNYL 121
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDF--------CPKISDFGLAKQTEKKESFISMLDTRGT 372
H + I+H D+K NI + + KI+DFGLA++ + + + G
Sbjct: 122 HDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT----TKMSAAGA 177
Query: 373 AGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
++APEV S SDV+SYG+++ E++ G
Sbjct: 178 YAWMAPEVIRASM--FSKGSDVWSYGVLLWELLTG 210
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 11/206 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
++ R + KLGQG + +V+ GT VA+K +K + E F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V E+ ++ E+M GSL ++ + GK L + +A IA G+
Sbjct: 74 KLVQLYAVVSEEPI-YIVCEYMSKGSLLDFL---KGEMGK-YLRLPQLVDMAAQIASGMA 128
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
Y+ R + VH D++ NI + E+ K++DFGLA+ E E + + + + AP
Sbjct: 129 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 184
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEM 404
E +G + KSDV+S+G+++ E+
Sbjct: 185 EAAL--YGRFTIKSDVWSFGILLTEL 208
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 19/196 (9%)
Query: 211 LGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCYEK 270
+G+G + DV G G VAVK +KN + F+ E + +++ H N+V LG E+
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 77
Query: 271 KKRA-LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIV 329
K ++ E+M GSL Y+ S G+ L + + ++ + +EYL G N V
Sbjct: 78 KGGLYIVTEYMAKGSLVDYL----RSRGRSVLGGDCLLKFSLDVCEAMEYLE-GNNF--V 130
Query: 330 HLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT-RGTAGYIAPEVFCRHFGGV 388
H D+ N+ + ED K+SDFGL K+ S DT + + APE
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTKEAS------STQDTGKLPVKWTAPEAL--REAAF 182
Query: 389 SHKSDVYSYGMMIHEM 404
S KSDV+S+G+++ E+
Sbjct: 183 STKSDVWSFGILLWEI 198
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 11/206 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
++ R + KLGQG + +V+ GT VA+K +K + E F+ E + + H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 70
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V E+ ++ E+M GSL ++ + GK L + ++ IA G+
Sbjct: 71 KLVQLYAVVSEEPI-YIVTEYMNKGSLLDFL---KGETGK-YLRLPQLVDMSAQIASGMA 125
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
Y+ R + VH D++ NI + E+ K++DFGLA+ E E + + + + AP
Sbjct: 126 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 181
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEM 404
E +G + KSDV+S+G+++ E+
Sbjct: 182 EAAL--YGRFTIKSDVWSFGILLTEL 205
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 11/206 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
++ R + KLGQG + +V+ GT VA+K +K + E F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V E+ +I E+M GSL ++ + GK L + +A IA G+
Sbjct: 74 KLVQLYAVVSEEPIYIVI-EYMSKGSLLDFL---KGEMGK-YLRLPQLVDMAAQIASGMA 128
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
Y+ R + VH D++ NI + E+ K++DFGLA+ E E + + + AP
Sbjct: 129 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEX-TARQGAKFPIKWTAP 184
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEM 404
E +G + KSDV+S+G+++ E+
Sbjct: 185 EAAL--YGRFTIKSDVWSFGILLTEL 208
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 11/206 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
++ R + KLGQG + +V+ GT VA+K +K + E F+ E + + H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 70
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V E+ ++ E+M GSL ++ + GK L + ++ IA G+
Sbjct: 71 KLVQLYAVVSEEPI-YIVTEYMNKGSLLDFL---KGETGK-YLRLPQLVDMSAQIASGMA 125
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
Y+ R + VH D++ NI + E+ K++DFGLA+ E E + + + + AP
Sbjct: 126 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-WTARQGAKFPIKWTAP 181
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEM 404
E +G + KSDV+S+G+++ E+
Sbjct: 182 EAAL--YGRFTIKSDVWSFGILLTEL 205
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 135/293 (46%), Gaps = 37/293 (12%)
Query: 207 FSDKLGQGGYADVYKGTLPDGRL---VAVKVMKNL--KDNGEEFINEVASISRTSH-VNI 260
F D +G+G + V K + L A+K MK KD+ +F E+ + + H NI
Sbjct: 26 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHE----------SSNGKRTLEWRTVYQIA 310
+ LG C + L E+ P+G+L ++ +++ TL + + A
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 311 VGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR 370
+ARG++YL + + +H ++ NI + E++ KI+DFGL++ +E ++ R
Sbjct: 146 ADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGR 199
Query: 371 GTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQI 430
++A E ++ + SDV+SYG+++ E+V ++C+ +Y+++
Sbjct: 200 LPVRWMAIESL--NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE------LYEKL 251
Query: 431 ETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSIE 483
Y + +E ++ ++ C + P +RPS +++ L +E
Sbjct: 252 PQGYRLEKPLNCDDEVYDLMRQ-------CWREKPYERPSFAQILVSLNRMLE 297
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 11/206 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
++ R + KLGQG + +V+ GT VA+K +K + E F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V E+ ++ E+M GSL ++ + GK L + +A IA G+
Sbjct: 74 KLVQLYAVVSEEPI-YIVTEYMSKGSLLDFL---KGEMGK-YLRLPQLVDMAAQIASGMA 128
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
Y+ R + VH D+ NI + E+ K++DFGLA+ E E + + + + AP
Sbjct: 129 YVER---MNYVHRDLAAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 184
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEM 404
E +G + KSDV+S+G+++ E+
Sbjct: 185 EAAL--YGRFTIKSDVWSFGILLTEL 208
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 11/207 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
++ R + KLGQG + +V+ GT VA+K +K + E F+ E + + H
Sbjct: 181 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHE 240
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V E+ ++ E+M GSL ++ + GK L + +A IA G+
Sbjct: 241 KLVQLYAVVSEEPI-YIVTEYMSKGSLLDFL---KGEMGK-YLRLPQLVDMAAQIASGMA 295
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
Y+ R + VH D++ NI + E+ K++DFGL + E E + + + + AP
Sbjct: 296 YVER---MNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNE-YTARQGAKFPIKWTAP 351
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMV 405
E +G + KSDV+S+G+++ E+
Sbjct: 352 EAAL--YGRFTIKSDVWSFGILLTELT 376
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 11/206 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
++ R + KLGQG + +V+ GT VA+K +K + E F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V E+ ++ E+M G L ++ + GK L + +A IA G+
Sbjct: 74 KLVQLYAVVSEEPI-YIVMEYMSKGCLLDFL---KGEMGK-YLRLPQLVDMAAQIASGMA 128
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
Y+ R + VH D++ NI + E+ K++DFGLA+ E E + + + + AP
Sbjct: 129 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 184
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEM 404
E +G + KSDV+S+G+++ E+
Sbjct: 185 EAAL--YGRFTIKSDVWSFGILLTEL 208
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 137/310 (44%), Gaps = 42/310 (13%)
Query: 211 LGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCYEK 270
+G+G + V K + VA+K +++ + + FI E+ +SR +H NIV G C
Sbjct: 17 VGRGAFGVVCKAKW-RAKDVAIKQIESESER-KAFIVELRQLSRVNHPNIVKLYGACL-- 72
Query: 271 KKRALIYEFMPNGSLDQYIYDHES---SNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIR 327
L+ E+ GSL ++ E + W + ++G+ YLH
Sbjct: 73 NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPKA 126
Query: 328 IVHLDIKPHNIRLDE-DFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFG 386
++H D+KP N+ L KI DFG A + M + +G+A ++APEVF
Sbjct: 127 LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-----MTNNKGSAAWMAPEVF--EGS 179
Query: 387 GVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEE 446
S K DV+S+G+++ E++ RK D ++ + A++ +G
Sbjct: 180 NYSEKCDVFSWGIILWEVITRRKPFD-EIGGPAFRIMWAVH-----------NGTRPPLI 227
Query: 447 KEMAKKMILVSLWCIQTHPPDRPSMTKVVEML-------EGSIENLQIPPKPSLSLPTGY 499
K + K + + C P RPSM ++V+++ G+ E LQ P + SLP G
Sbjct: 228 KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYPCQ--HSLPPGE 285
Query: 500 AKQSSPTSSF 509
+ P F
Sbjct: 286 DGRVEPYVDF 295
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 137/310 (44%), Gaps = 42/310 (13%)
Query: 211 LGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCYEK 270
+G+G + V K + VA+K +++ + + FI E+ +SR +H NIV G C
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQIES-ESERKAFIVELRQLSRVNHPNIVKLYGACL-- 71
Query: 271 KKRALIYEFMPNGSLDQYIYDHES---SNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIR 327
L+ E+ GSL ++ E + W + ++G+ YLH
Sbjct: 72 NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPKA 125
Query: 328 IVHLDIKPHNIRLDE-DFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFG 386
++H D+KP N+ L KI DFG A + M + +G+A ++APEVF
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-----MTNNKGSAAWMAPEVF--EGS 178
Query: 387 GVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEE 446
S K DV+S+G+++ E++ RK D ++ + A++ +G
Sbjct: 179 NYSEKCDVFSWGIILWEVITRRKPFD-EIGGPAFRIMWAVH-----------NGTRPPLI 226
Query: 447 KEMAKKMILVSLWCIQTHPPDRPSMTKVVEML-------EGSIENLQIPPKPSLSLPTGY 499
K + K + + C P RPSM ++V+++ G+ E LQ P + SLP G
Sbjct: 227 KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYPCQ--HSLPPGE 284
Query: 500 AKQSSPTSSF 509
+ P F
Sbjct: 285 DGRVEPYVDF 294
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 11/206 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
++ R + KLGQG + +V+ GT VA+K +K + E F+ E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V E+ ++ E+M G L ++ + GK L + +A IA G+
Sbjct: 74 KLVQLYAVVSEEPI-YIVTEYMSKGCLLDFL---KGEMGK-YLRLPQLVDMAAQIASGMA 128
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
Y+ R + VH D++ NI + E+ K++DFGLA+ E E + + + + AP
Sbjct: 129 YVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAP 184
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEM 404
E +G + KSDV+S+G+++ E+
Sbjct: 185 EAAL--YGRFTIKSDVWSFGILLTEL 208
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 19/196 (9%)
Query: 211 LGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCYEK 270
+G+G + DV G G VAVK +KN + F+ E + +++ H N+V LG E+
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 271 KKRA-LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIV 329
K ++ E+M GSL Y+ S G+ L + + ++ + +EYL G N V
Sbjct: 72 KGGLYIVTEYMAKGSLVDYL----RSRGRSVLGGDCLLKFSLDVCEAMEYLE-GNNF--V 124
Query: 330 HLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT-RGTAGYIAPEVFCRHFGGV 388
H D+ N+ + ED K+SDFGL K+ S DT + + APE
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTKEAS------STQDTGKLPVKWTAPEALREK--KF 176
Query: 389 SHKSDVYSYGMMIHEM 404
S KSDV+S+G+++ E+
Sbjct: 177 STKSDVWSFGILLWEI 192
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 19/196 (9%)
Query: 211 LGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCYEK 270
+G+G + DV G G VAVK +KN + F+ E + +++ H N+V LG E+
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 86
Query: 271 KKRA-LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIV 329
K ++ E+M GSL Y+ S G+ L + + ++ + +EYL G N V
Sbjct: 87 KGGLYIVTEYMAKGSLVDYL----RSRGRSVLGGDCLLKFSLDVCEAMEYLE-GNNF--V 139
Query: 330 HLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT-RGTAGYIAPEVFCRHFGGV 388
H D+ N+ + ED K+SDFGL K+ S DT + + APE
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTKEAS------STQDTGKLPVKWTAPEALREK--KF 191
Query: 389 SHKSDVYSYGMMIHEM 404
S KSDV+S+G+++ E+
Sbjct: 192 STKSDVWSFGILLWEI 207
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 133/316 (42%), Gaps = 48/316 (15%)
Query: 186 NYGSLAPKRFSYSDVRRMTK---SFSDKLGQGGYADVYKGTL------PDGRLVAVKVMK 236
NY S A K S SD++ + + + LG G + +VY+G + P VAVK +
Sbjct: 12 NY-SFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 70
Query: 237 NLKDNGEE--FINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHES 294
+ +E F+ E IS+ +H NIV +G + R ++ E M G L ++ +
Sbjct: 71 EVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 130
Query: 295 SNGK-RTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP------K 347
+ +L + +A IA G +YL +H DI N L CP K
Sbjct: 131 RPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAK 184
Query: 348 ISDFGLAKQTEKKESF----ISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHE 403
I DFG+A+ + + +ML + ++ PE F G + K+D +S+G+++ E
Sbjct: 185 IGDFGMARDIYRASYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWE 238
Query: 404 MVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQT 463
+ S Y P K + +F G + K + + C Q
Sbjct: 239 IF------------SLGYMPYP-SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQH 285
Query: 464 HPPDRPSMTKVVEMLE 479
P DRP+ ++E +E
Sbjct: 286 QPEDRPNFAIILERIE 301
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 19/196 (9%)
Query: 211 LGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCYEK 270
+G+G + DV G G VAVK +KN + F+ E + +++ H N+V LG E+
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 258
Query: 271 KKRA-LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIV 329
K ++ E+M GSL Y+ S G+ L + + ++ + +EYL G N V
Sbjct: 259 KGGLYIVTEYMAKGSLVDYL----RSRGRSVLGGDCLLKFSLDVCEAMEYLE-GNNF--V 311
Query: 330 HLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT-RGTAGYIAPEVFCRHFGGV 388
H D+ N+ + ED K+SDFGL K+ S DT + + APE
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTKEAS------STQDTGKLPVKWTAPEALREK--KF 363
Query: 389 SHKSDVYSYGMMIHEM 404
S KSDV+S+G+++ E+
Sbjct: 364 STKSDVWSFGILLWEI 379
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 133/316 (42%), Gaps = 48/316 (15%)
Query: 186 NYGSLAPKRFSYSDVRRMTK---SFSDKLGQGGYADVYKGTL------PDGRLVAVKVMK 236
NY S A K S SD++ + + + LG G + +VY+G + P VAVK +
Sbjct: 12 NY-SFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 70
Query: 237 NLKDNGEE--FINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHES 294
+ +E F+ E IS+ +H NIV +G + R ++ E M G L ++ +
Sbjct: 71 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 130
Query: 295 SNGK-RTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP------K 347
+ +L + +A IA G +YL +H DI N L CP K
Sbjct: 131 RPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAK 184
Query: 348 ISDFGLAKQTEKKESF----ISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHE 403
I DFG+A+ + + +ML + ++ PE F G + K+D +S+G+++ E
Sbjct: 185 IGDFGMARDIYRASYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWE 238
Query: 404 MVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQT 463
+ S Y P K + +F G + K + + C Q
Sbjct: 239 IF------------SLGYMPYP-SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQH 285
Query: 464 HPPDRPSMTKVVEMLE 479
P DRP+ ++E +E
Sbjct: 286 QPEDRPNFAIILERIE 301
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 133/316 (42%), Gaps = 48/316 (15%)
Query: 186 NYGSLAPKRFSYSDVRRMTK---SFSDKLGQGGYADVYKGTL------PDGRLVAVKVMK 236
NY S A K S SD++ + + + LG G + +VY+G + P VAVK +
Sbjct: 18 NY-SFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 76
Query: 237 NLKDNGEE--FINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHES 294
+ +E F+ E IS+ +H NIV +G + R ++ E M G L ++ +
Sbjct: 77 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 136
Query: 295 SNGK-RTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP------K 347
+ +L + +A IA G +YL +H DI N L CP K
Sbjct: 137 RPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAK 190
Query: 348 ISDFGLAKQTEKKESF----ISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHE 403
I DFG+A+ + + +ML + ++ PE F G + K+D +S+G+++ E
Sbjct: 191 IGDFGMARDIYRASYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWE 244
Query: 404 MVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQT 463
+ S Y P K + +F G + K + + C Q
Sbjct: 245 IF------------SLGYMPYP-SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQH 291
Query: 464 HPPDRPSMTKVVEMLE 479
P DRP+ ++E +E
Sbjct: 292 QPEDRPNFAIILERIE 307
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 133/316 (42%), Gaps = 48/316 (15%)
Query: 186 NYGSLAPKRFSYSDVRRMTK---SFSDKLGQGGYADVYKGTL------PDGRLVAVKVMK 236
NY S A K S SD++ + + + LG G + +VY+G + P VAVK +
Sbjct: 12 NY-SFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 70
Query: 237 NLKDNGEE--FINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHES 294
+ +E F+ E IS+ +H NIV +G + R ++ E M G L ++ +
Sbjct: 71 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 130
Query: 295 SNGK-RTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP------K 347
+ +L + +A IA G +YL +H DI N L CP K
Sbjct: 131 RPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAK 184
Query: 348 ISDFGLAKQTEKKESF----ISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHE 403
I DFG+A+ + + +ML + ++ PE F G + K+D +S+G+++ E
Sbjct: 185 IGDFGMAQDIYRASYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWE 238
Query: 404 MVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQT 463
+ S Y P K + +F G + K + + C Q
Sbjct: 239 IF------------SLGYMPYP-SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQH 285
Query: 464 HPPDRPSMTKVVEMLE 479
P DRP+ ++E +E
Sbjct: 286 QPEDRPNFAIILERIE 301
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 28/212 (13%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLKDNGEEFINEVASISRTSH-VNIVPFLGFCY 268
+G G Y VYKG + G+L A+KVM D EE E+ + + SH NI + G
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 269 EKK------KRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
+K + L+ EF GS+ I + + + K EW + I I RGL +LH+
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKE--EW--IAYICREILRGLSHLHQ 147
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTE----KKESFISMLDTRGTAGYIAP 378
+++H DIK N+ L E+ K+ DFG++ Q + ++ +FI GT ++AP
Sbjct: 148 H---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI------GTPYWMAP 198
Query: 379 EVF-CRHFGGVSH--KSDVYSYGMMIHEMVIG 407
EV C ++ KSD++S G+ EM G
Sbjct: 199 EVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 21/209 (10%)
Query: 207 FSDKLGQGGYADVYKGTL--PDGRLV--AVKVMKNLKDNGE--EFINEVASISRTSHVNI 260
F++ +G+G + VY GTL DG+ + AVK + + D GE +F+ E + SH N+
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 261 VPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ LG C + L+ +M +G L +I + + + L + +A+G++Y
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKY 148
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT---AGYI 376
L + + VH D+ N LDE F K++DFGLA+ KE + S+ + G ++
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE-YYSVHNKTGAKLPVKWM 204
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
A E + KSDV+S+G+++ E++
Sbjct: 205 ALESLQTQ--KFTTKSDVWSFGVLLWELM 231
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 207 FSDKLGQGGYADVYKGTL--PDGRLV--AVKVMKNLKDNGE--EFINEVASISRTSHVNI 260
F++ +G+G + VY GTL DG+ + AVK + + D GE +F+ E + SH N+
Sbjct: 53 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 112
Query: 261 VPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ LG C + L+ +M +G L +I + E+ N + + + +A+G++Y
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVAKGMKY 167
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT---AGYI 376
L + + VH D+ N LDE F K++DFGLA+ KE + S+ + G ++
Sbjct: 168 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE-YYSVHNKTGAKLPVKWM 223
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
A E + KSDV+S+G+++ E++
Sbjct: 224 ALESLQTQ--KFTTKSDVWSFGVLLWELM 250
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 138
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFGLAK +E + ++A E
Sbjct: 139 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 197 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 135
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFGLAK +E + ++A E
Sbjct: 136 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 194 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 136
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFGLAK +E + ++A E
Sbjct: 137 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 195 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 86 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 137
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFGLAK +E + ++A E
Sbjct: 138 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 196 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 135
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFGLAK +E + ++A E
Sbjct: 136 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 194 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 134
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFGLAK +E + ++A E
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 193 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 21/209 (10%)
Query: 207 FSDKLGQGGYADVYKGTL--PDGRLV--AVKVMKNLKDNGE--EFINEVASISRTSHVNI 260
F++ +G+G + VY GTL DG+ + AVK + + D GE +F+ E + SH N+
Sbjct: 26 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 85
Query: 261 VPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ LG C + L+ +M +G L +I + + + L + +A+G++Y
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKY 140
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT---AGYI 376
L + + VH D+ N LDE F K++DFGLA+ KE + S+ + G ++
Sbjct: 141 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE-YYSVHNKTGAKLPVKWM 196
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
A E + KSDV+S+G+++ E++
Sbjct: 197 ALESLQTQ--KFTTKSDVWSFGVLLWELM 223
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 207 FSDKLGQGGYADVYKGTL--PDGRLV--AVKVMKNLKDNGE--EFINEVASISRTSHVNI 260
F++ +G+G + VY GTL DG+ + AVK + + D GE +F+ E + SH N+
Sbjct: 52 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 111
Query: 261 VPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ LG C + L+ +M +G L +I + E+ N + + + +A+G++Y
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVAKGMKY 166
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT---AGYI 376
L + + VH D+ N LDE F K++DFGLA+ KE + S+ + G ++
Sbjct: 167 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE-YYSVHNKTGAKLPVKWM 222
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
A E + KSDV+S+G+++ E++
Sbjct: 223 ALESLQTQ--KFTTKSDVWSFGVLLWELM 249
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 133/316 (42%), Gaps = 48/316 (15%)
Query: 186 NYGSLAPKRFSYSDVRRMTK---SFSDKLGQGGYADVYKGTL------PDGRLVAVKVMK 236
NY S A K S SD++ + + + LG G + +VY+G + P VAVK +
Sbjct: 38 NY-SFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 96
Query: 237 NLKDNGEE--FINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHES 294
+ +E F+ E IS+ +H NIV +G + R ++ E M G L ++ +
Sbjct: 97 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 156
Query: 295 SNGK-RTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP------K 347
+ +L + +A IA G +YL +H DI N L CP K
Sbjct: 157 RPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAK 210
Query: 348 ISDFGLAKQTEKKESF----ISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHE 403
I DFG+A+ + + +ML + ++ PE F G + K+D +S+G+++ E
Sbjct: 211 IGDFGMARDIYRASYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWE 264
Query: 404 MVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQT 463
+ S Y P K + +F G + K + + C Q
Sbjct: 265 IF------------SLGYMPYP-SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQH 311
Query: 464 HPPDRPSMTKVVEMLE 479
P DRP+ ++E +E
Sbjct: 312 QPEDRPNFAIILERIE 327
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 112/246 (45%), Gaps = 43/246 (17%)
Query: 211 LGQGGYADVYKG-TLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCYE 269
LGQG + V K D R A+K +++ ++ ++EV ++ +H +V + E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 270 K----------KKRALIY---EFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARG 316
+ KK++ ++ E+ NG+L I+ E+ N +R WR QI
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQIL----EA 128
Query: 317 LEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR------ 370
L Y+H I+H D+KP NI +DE KI DFGLAK + + LD++
Sbjct: 129 LSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK-LDSQNLPGSS 184
Query: 371 -------GTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMV------IGRKNADVKVSC 417
GTA Y+A EV G + K D+YS G++ EM+ + R N K+
Sbjct: 185 DNLTSAIGTAMYVATEVL-DGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRS 243
Query: 418 SSEYFP 423
S FP
Sbjct: 244 VSIEFP 249
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 21/209 (10%)
Query: 207 FSDKLGQGGYADVYKGTL--PDGRLV--AVKVMKNLKDNGE--EFINEVASISRTSHVNI 260
F++ +G+G + VY GTL DG+ + AVK + + D GE +F+ E + SH N+
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 261 VPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ LG C + L+ +M +G L +I + + + L + +A+G++Y
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKY 148
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT---AGYI 376
L + + VH D+ N LDE F K++DFGLA+ KE + S+ + G ++
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE-YYSVHNKTGAKLPVKWM 204
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
A E + KSDV+S+G+++ E++
Sbjct: 205 ALESLQTQ--KFTTKSDVWSFGVLLWELM 231
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 21/209 (10%)
Query: 207 FSDKLGQGGYADVYKGTL--PDGRLV--AVKVMKNLKDNGE--EFINEVASISRTSHVNI 260
F++ +G+G + VY GTL DG+ + AVK + + D GE +F+ E + SH N+
Sbjct: 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 90
Query: 261 VPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ LG C + L+ +M +G L +I + + + L + +A+G++Y
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKY 145
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT---AGYI 376
L + + VH D+ N LDE F K++DFGLA+ KE + S+ + G ++
Sbjct: 146 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE-YYSVHNKTGAKLPVKWM 201
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
A E + KSDV+S+G+++ E++
Sbjct: 202 ALESLQTQ--KFTTKSDVWSFGVLLWELM 228
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 21/209 (10%)
Query: 207 FSDKLGQGGYADVYKGTL--PDGRLV--AVKVMKNLKDNGE--EFINEVASISRTSHVNI 260
F++ +G+G + VY GTL DG+ + AVK + + D GE +F+ E + SH N+
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 261 VPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ LG C + L+ +M +G L +I + + + L + +A+G++Y
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKY 147
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT---AGYI 376
L + + VH D+ N LDE F K++DFGLA+ KE + S+ + G ++
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE-YYSVHNKTGAKLPVKWM 203
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
A E + KSDV+S+G+++ E++
Sbjct: 204 ALESLQTQ--KFTTKSDVWSFGVLLWELM 230
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 207 FSDKLGQGGYADVYKGTL--PDGRLV--AVKVMKNLKDNGE--EFINEVASISRTSHVNI 260
F++ +G+G + VY GTL DG+ + AVK + + D GE +F+ E + SH N+
Sbjct: 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 88
Query: 261 VPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ LG C + L+ +M +G L +I + E+ N + + + +A+G++Y
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVAKGMKY 143
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT---AGYI 376
L + + VH D+ N LDE F K++DFGLA+ KE + S+ + G ++
Sbjct: 144 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE-YYSVHNKTGAKLPVKWM 199
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
A E + KSDV+S+G+++ E++
Sbjct: 200 ALESLQTQ--KFTTKSDVWSFGVLLWELM 226
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 141
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFGLAK +E + ++A E
Sbjct: 142 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 200 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 134
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFGLAK +E + ++A E
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 193 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 137
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFGLAK +E + ++A E
Sbjct: 138 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 196 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 108 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 159
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFGLAK +E + ++A E
Sbjct: 160 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 217
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 218 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 207 FSDKLGQGGYADVYKGTL--PDGRLV--AVKVMKNLKDNGE--EFINEVASISRTSHVNI 260
F++ +G+G + VY GTL DG+ + AVK + + D GE +F+ E + SH N+
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 261 VPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ LG C + L+ +M +G L +I + E+ N + + + +A+G++Y
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVAKGMKY 146
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT---AGYI 376
L + + VH D+ N LDE F K++DFGLA+ KE + S+ + G ++
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE-YYSVHNKTGAKLPVKWM 202
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
A E + KSDV+S+G+++ E++
Sbjct: 203 ALESLQTQ--KFTTKSDVWSFGVLLWELM 229
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 114/244 (46%), Gaps = 30/244 (12%)
Query: 180 EAAFVRNYGSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTL----PDGRLVAVKVM 235
E + + K S S VR F ++LG+ + VYKG L P + AV +
Sbjct: 8 EMPLINQHKQAKLKEISLSAVR-----FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAI- 61
Query: 236 KNLKDNGE-----EFINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIY 290
K LKD E EF +E +R H N+V LG + + ++I+ + +G L +++
Sbjct: 62 KTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLV 121
Query: 291 ------DHESSNGKRT----LEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRL 340
D S++ RT LE + IA G+EYL + +VH D+ N+ +
Sbjct: 122 MRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLV 178
Query: 341 DEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMM 400
+ KISD GL ++ + + + ++ ++APE +G S SD++SYG++
Sbjct: 179 YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM--YGKFSIDSDIWSYGVV 236
Query: 401 IHEM 404
+ E+
Sbjct: 237 LWEV 240
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 134
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFGLAK +E + ++A E
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 193 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 136
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFGLAK +E + ++A E
Sbjct: 137 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 195 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 134
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFGLAK +E + ++A E
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 193 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 77 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 128
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFGLAK +E + ++A E
Sbjct: 129 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 186
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 187 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 89 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 140
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFGLAK +E + ++A E
Sbjct: 141 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 198
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 199 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 130/312 (41%), Gaps = 47/312 (15%)
Query: 190 LAPKRFSYSDVRRMTK---SFSDKLGQGGYADVYKGTL------PDGRLVAVKVMKNLKD 240
A K S SD++ + + + LG G + +VY+G + P VAVK + +
Sbjct: 29 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 88
Query: 241 NGEE--FINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGK 298
+E F+ E IS+ +H NIV +G + R ++ E M G L ++ + +
Sbjct: 89 EQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 148
Query: 299 -RTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP------KISDF 351
+L + +A IA G +YL +H DI N L CP KI DF
Sbjct: 149 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGDF 202
Query: 352 GLAKQTEKKESF----ISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
G+A+ + + +ML + ++ PE F G + K+D +S+G+++ E+
Sbjct: 203 GMARDIYRASYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWEIF-- 254
Query: 408 RKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPD 467
S Y P K + +F G + K + + C Q P D
Sbjct: 255 ----------SLGYMPYP-SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPED 303
Query: 468 RPSMTKVVEMLE 479
RP+ ++E +E
Sbjct: 304 RPNFAIILERIE 315
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 93 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 144
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFGLAK +E + ++A E
Sbjct: 145 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 202
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 203 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 137
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFGLAK +E + ++A E
Sbjct: 138 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 196 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 19/208 (9%)
Query: 207 FSDKLGQGGYADVYKGTL--PDGRLV--AVKVMKNLKDNGE--EFINEVASISRTSHVNI 260
F++ +G+G + VY GTL DG+ + AVK + + D GE +F+ E + SH N+
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 261 VPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ LG C + L+ +M +G L +I + + + L + +A+G++Y
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKY 147
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKE--SFISMLDTRGTAGYIA 377
L + + VH D+ N LDE F K++DFGLA+ KE S + + ++A
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
E + KSDV+S+G+++ E++
Sbjct: 205 LESLQTQ--KFTTKSDVWSFGVLLWELM 230
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 137
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFGLAK +E + ++A E
Sbjct: 138 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 196 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 14/205 (6%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMKNLKDNG--EEFINEVASISRTSHVNIVPFLG 265
+KLG G YA VYKG G VA+K +K + G I E++ + H NIV
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ + K L++EFM N L +Y+ N R LE V + +GL + H
Sbjct: 71 VIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN-- 127
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
+I+H D+KP N+ +++ K+ DFGLA+ + S T Y AP+V
Sbjct: 128 -KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFS--SEVVTLWYRAPDVL---M 181
Query: 386 GGVSHKS--DVYSYGMMIHEMVIGR 408
G ++ + D++S G ++ EM+ G+
Sbjct: 182 GSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 21/209 (10%)
Query: 207 FSDKLGQGGYADVYKGTL--PDGRLV--AVKVMKNLKDNGE--EFINEVASISRTSHVNI 260
F++ +G+G + VY GTL DG+ + AVK + + D GE +F+ E + SH N+
Sbjct: 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 152
Query: 261 VPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ LG C + L+ +M +G L +I + + + L + +A+G+++
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKF 207
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT---AGYI 376
L + + VH D+ N LDE F K++DFGLA+ KE F S+ + G ++
Sbjct: 208 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE-FDSVHNKTGAKLPVKWM 263
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
A E + KSDV+S+G+++ E++
Sbjct: 264 ALESLQTQ--KFTTKSDVWSFGVLLWELM 290
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 124/266 (46%), Gaps = 37/266 (13%)
Query: 230 VAVKVMKN--LKDNGEEFINEVASISRT-SHVNIVPFLGFCYEKKKRALIYEFMPNGSLD 286
VAVK++K+ + + + I+E+ + H NI+ LG C + +I E+ G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 287 QYIYDHE----------SSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPH 336
+Y+ E S N + L + + A +ARG+EYL + + +H D+
Sbjct: 123 EYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 179
Query: 337 NIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE-VFCRHFGGVSHKSDVY 395
N+ + ED KI+DFGLA+ + + + R ++APE +F R + +H+SDV+
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY---THQSDVW 236
Query: 396 SYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQL--DGVVTEEEKEMAKKM 453
S+G+++ E+ + Y + E F+L +G ++ ++
Sbjct: 237 SFGVLLWEIFT---------------LGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNEL 281
Query: 454 ILVSLWCIQTHPPDRPSMTKVVEMLE 479
++ C P RP+ ++VE L+
Sbjct: 282 YMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 207 FSDKLGQGGYADVYKGTL--PDGRLV--AVKVMKNLKDNGE--EFINEVASISRTSHVNI 260
F++ +G+G + VY GTL DG+ + AVK + + D GE +F+ E + SH N+
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 261 VPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ LG C + L+ +M +G L +I + E+ N + + + +A+G+++
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVAKGMKF 149
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT---AGYI 376
L + + VH D+ N LDE F K++DFGLA+ KE F S+ + G ++
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKE-FDSVHNKTGAKLPVKWM 205
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
A E + KSDV+S+G+++ E++
Sbjct: 206 ALESLQTQ--KFTTKSDVWSFGVLLWELM 232
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 207 FSDKLGQGGYADVYKGTL--PDGRLV--AVKVMKNLKDNGE--EFINEVASISRTSHVNI 260
F++ +G+G + VY GTL DG+ + AVK + + D GE +F+ E + SH N+
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 261 VPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ LG C + L+ +M +G L +I + E+ N + + + +A+G+++
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVAKGMKF 149
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT---AGYI 376
L + + VH D+ N LDE F K++DFGLA+ KE F S+ + G ++
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE-FDSVHNKTGAKLPVKWM 205
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
A E + KSDV+S+G+++ E++
Sbjct: 206 ALESLQTQ--KFTTKSDVWSFGVLLWELM 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 207 FSDKLGQGGYADVYKGTL--PDGRLV--AVKVMKNLKDNGE--EFINEVASISRTSHVNI 260
F++ +G+G + VY GTL DG+ + AVK + + D GE +F+ E + SH N+
Sbjct: 39 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 98
Query: 261 VPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ LG C + L+ +M +G L +I + E+ N + + + +A+G+++
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVAKGMKF 153
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT---AGYI 376
L + + VH D+ N LDE F K++DFGLA+ KE F S+ + G ++
Sbjct: 154 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE-FDSVHNKTGAKLPVKWM 209
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
A E + KSDV+S+G+++ E++
Sbjct: 210 ALESLQTQ--KFTTKSDVWSFGVLLWELM 236
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 132/316 (41%), Gaps = 48/316 (15%)
Query: 186 NYGSLAPKRFSYSDVRRMTK---SFSDKLGQGGYADVYKGTL------PDGRLVAVKVMK 236
NY A K S SD++ + + + LG G + +VY+G + P VAVK +
Sbjct: 3 NY-CFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 61
Query: 237 NLKDNGEE--FINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHES 294
+ +E F+ E IS+ +H NIV +G + R ++ E M G L ++ +
Sbjct: 62 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 121
Query: 295 SNGK-RTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP------K 347
+ +L + +A IA G +YL +H DI N L CP K
Sbjct: 122 RPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAK 175
Query: 348 ISDFGLAKQTEKKESF----ISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHE 403
I DFG+A+ + + +ML + ++ PE F G + K+D +S+G+++ E
Sbjct: 176 IGDFGMARDIYRASYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWE 229
Query: 404 MVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQT 463
+ S Y P K + +F G + K + + C Q
Sbjct: 230 IF------------SLGYMPYP-SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQH 276
Query: 464 HPPDRPSMTKVVEMLE 479
P DRP+ ++E +E
Sbjct: 277 QPEDRPNFAIILERIE 292
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 207 FSDKLGQGGYADVYKGTL--PDGRLV--AVKVMKNLKDNGE--EFINEVASISRTSHVNI 260
F++ +G+G + VY GTL DG+ + AVK + + D GE +F+ E + SH N+
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 261 VPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ LG C + L+ +M +G L +I + E+ N + + + +A+G+++
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVAKGMKF 146
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT---AGYI 376
L + + VH D+ N LDE F K++DFGLA+ KE F S+ + G ++
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE-FDSVHNKTGAKLPVKWM 202
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
A E + KSDV+S+G+++ E++
Sbjct: 203 ALESLQTQ--KFTTKSDVWSFGVLLWELM 229
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 103/201 (51%), Gaps = 14/201 (6%)
Query: 210 KLGQGGYADVYKGT-LPDGRLVAVKVMK--NLKDNGE--EFINEVASISRTSHVNIVPFL 264
K+G+G +++VY+ L DG VA+K ++ +L D + I E+ + + +H N++ +
Sbjct: 39 KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYY 98
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
E + ++ E G L + I + KR + RTV++ V + LE++H
Sbjct: 99 ASFIEDNELNIVLELADAGDLSRMIKHFKKQ--KRLIPERTVWKYFVQLCSALEHMH--- 153
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRH 384
+ R++H DIKP N+ + K+ D GL + K + L GT Y++PE H
Sbjct: 154 SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL--VGTPYYMSPERI--H 209
Query: 385 FGGVSHKSDVYSYGMMIHEMV 405
G + KSD++S G +++EM
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMA 230
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 130/312 (41%), Gaps = 47/312 (15%)
Query: 190 LAPKRFSYSDVRRMTK---SFSDKLGQGGYADVYKGTL------PDGRLVAVKVMKNLKD 240
A K S SD++ + + + LG G + +VY+G + P VAVK + +
Sbjct: 29 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYS 88
Query: 241 NGEE--FINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGK 298
+E F+ E IS+ +H NIV +G + R ++ E M G L ++ + +
Sbjct: 89 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 148
Query: 299 -RTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP------KISDF 351
+L + +A IA G +YL +H DI N L CP KI DF
Sbjct: 149 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGDF 202
Query: 352 GLAKQTEKKESF----ISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
G+A+ + + +ML + ++ PE F G + K+D +S+G+++ E+
Sbjct: 203 GMARDIYRASYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWEIF-- 254
Query: 408 RKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPD 467
S Y P K + +F G + K + + C Q P D
Sbjct: 255 ----------SLGYMPYP-SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPED 303
Query: 468 RPSMTKVVEMLE 479
RP+ ++E +E
Sbjct: 304 RPNFAIILERIE 315
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 21/209 (10%)
Query: 207 FSDKLGQGGYADVYKGTL--PDGRLV--AVKVMKNLKDNGE--EFINEVASISRTSHVNI 260
F++ +G+G + VY GTL DG+ + AVK + + D GE +F+ E + SH N+
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 261 VPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ LG C + L+ +M +G L +I + E+ N + + + +A+G+++
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTV----KDLIGFGLQVAKGMKF 148
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT---AGYI 376
L + + VH D+ N LDE F K++DFGLA+ KE F S+ + G ++
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE-FDSVHNKTGAKLPVKWM 204
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
A E + KSDV+S+G+++ E++
Sbjct: 205 ALESLQTQ--KFTTKSDVWSFGVLLWELM 231
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 132/316 (41%), Gaps = 48/316 (15%)
Query: 186 NYGSLAPKRFSYSDVRRMTK---SFSDKLGQGGYADVYKGTL------PDGRLVAVKVMK 236
NY A K S SD++ + + + LG G + +VY+G + P VAVK +
Sbjct: 11 NY-CFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 69
Query: 237 NLKDNGEE--FINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHES 294
+ +E F+ E IS+ +H NIV +G + R ++ E M G L ++ +
Sbjct: 70 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 129
Query: 295 SNGK-RTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP------K 347
+ +L + +A IA G +YL +H DI N L CP K
Sbjct: 130 RPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAK 183
Query: 348 ISDFGLAKQTEKKESF----ISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHE 403
I DFG+A+ + + +ML + ++ PE F G + K+D +S+G+++ E
Sbjct: 184 IGDFGMARDIYRASYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWE 237
Query: 404 MVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQT 463
+ S Y P K + +F G + K + + C Q
Sbjct: 238 IF------------SLGYMPYP-SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQH 284
Query: 464 HPPDRPSMTKVVEMLE 479
P DRP+ ++E +E
Sbjct: 285 QPEDRPNFAIILERIE 300
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 21/209 (10%)
Query: 207 FSDKLGQGGYADVYKGTL--PDGRLV--AVKVMKNLKDNGE--EFINEVASISRTSHVNI 260
F++ +G+G + VY GTL DG+ + AVK + + D GE +F+ E + SH N+
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 261 VPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ LG C + L+ +M +G L +I + + + L + +A+G+++
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKF 148
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT---AGYI 376
L + + VH D+ N LDE F K++DFGLA+ KE F S+ + G ++
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE-FDSVHNKTGAKLPVKWM 204
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
A E + KSDV+S+G+++ E++
Sbjct: 205 ALESLQTQ--KFTTKSDVWSFGVLLWELM 231
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
++ R + KLG G + +V+ T VAVK MK + E F+ E + H
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 70
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V L K+ +I EFM GSL ++ E S K+ L + + IA G+
Sbjct: 71 KLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGS--KQPLP--KLIDFSAQIAEGMA 125
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
++ + +H D++ NI + KI+DFGLA+ E E + + + + AP
Sbjct: 126 FIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YTAREGAKFPIKWTAP 181
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMV 405
E +FG + KSDV+S+G+++ E+V
Sbjct: 182 EAI--NFGSFTIKSDVWSFGILLMEIV 206
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 132/316 (41%), Gaps = 48/316 (15%)
Query: 186 NYGSLAPKRFSYSDVRRMTK---SFSDKLGQGGYADVYKGTL------PDGRLVAVKVMK 236
NY A K S SD++ + + + LG G + +VY+G + P VAVK +
Sbjct: 11 NY-CFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 69
Query: 237 NLKDNGEE--FINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHES 294
+ +E F+ E IS+ +H NIV +G + R ++ E M G L ++ +
Sbjct: 70 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRP 129
Query: 295 SNGK-RTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP------K 347
+ +L + +A IA G +YL +H DI N L CP K
Sbjct: 130 RPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAK 183
Query: 348 ISDFGLAKQTEKKESF----ISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHE 403
I DFG+A+ + + +ML + ++ PE F G + K+D +S+G+++ E
Sbjct: 184 IGDFGMARDIYRASYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWE 237
Query: 404 MVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQT 463
+ S Y P K + +F G + K + + C Q
Sbjct: 238 IF------------SLGYMPYP-SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQH 284
Query: 464 HPPDRPSMTKVVEMLE 479
P DRP+ ++E +E
Sbjct: 285 QPEDRPNFAIILERIE 300
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 131/312 (41%), Gaps = 47/312 (15%)
Query: 190 LAPKRFSYSDVRRMTK---SFSDKLGQGGYADVYKGTL------PDGRLVAVKVMKNLKD 240
A K S SD++ + + + LG G + +VY+G + P VAVK + +
Sbjct: 32 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 91
Query: 241 NGEE--FINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGK 298
+E F+ E IS+ +H NIV +G + R ++ E M G L ++ + +
Sbjct: 92 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 151
Query: 299 -RTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP------KISDF 351
+L + +A IA G +YL +H DI N L CP KI DF
Sbjct: 152 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGDF 205
Query: 352 GLAKQTEK----KESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
G+A+ + ++ +ML + ++ PE F G + K+D +S+G+++ E+
Sbjct: 206 GMARDIYRAGYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWEIF-- 257
Query: 408 RKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPD 467
S Y P K + +F G + K + + C Q P D
Sbjct: 258 ----------SLGYMPYP-SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPED 306
Query: 468 RPSMTKVVEMLE 479
RP+ ++E +E
Sbjct: 307 RPNFAIILERIE 318
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 123/288 (42%), Gaps = 46/288 (15%)
Query: 211 LGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEE----FINEVASISRTSHVNIVPFLGF 266
LG+G + K T + V VMK L EE F+ EV + H N++ F+G
Sbjct: 18 LGKGCFGQAIKVTHRETG--EVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 267 CYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNI 326
Y+ K+ I E++ G+L I +S W A IA G+ YLH ++
Sbjct: 76 LYKDKRLNFITEYIKGGTLRGIIKSMDSQ-----YPWSQRVSFAKDIASGMAYLH---SM 127
Query: 327 RIVHLDIKPHNIRLDEDFCPKISDFGLAK------------QTEKKESFISMLDTRGTAG 374
I+H D+ HN + E+ ++DFGLA+ ++ KK G
Sbjct: 128 NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY 187
Query: 375 YIAPEVFCRHFGGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIET 432
++APE+ G S+ K DV+S+G+++ E +IGR NAD +Y P +
Sbjct: 188 WMAPEM----INGRSYDEKVDVFSFGIVLCE-IIGRVNAD------PDYLPRTM------ 230
Query: 433 EYDFQLDGVVTEE-EKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
++ + G + +++ C P RPS K+ LE
Sbjct: 231 DFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 130/312 (41%), Gaps = 47/312 (15%)
Query: 190 LAPKRFSYSDVRRMTK---SFSDKLGQGGYADVYKGTL------PDGRLVAVKVMKNLKD 240
A K S SD++ + + + LG G + +VY+G + P VAVK + +
Sbjct: 29 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 88
Query: 241 NGEE--FINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGK 298
+E F+ E IS+ +H NIV +G + R ++ E M G L ++ + +
Sbjct: 89 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQ 148
Query: 299 -RTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP------KISDF 351
+L + +A IA G +YL +H DI N L CP KI DF
Sbjct: 149 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGDF 202
Query: 352 GLAKQTEKKESF----ISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
G+A+ + + +ML + ++ PE F G + K+D +S+G+++ E+
Sbjct: 203 GMARDIYRASYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWEIF-- 254
Query: 408 RKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPD 467
S Y P K + +F G + K + + C Q P D
Sbjct: 255 ----------SLGYMPYP-SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPED 303
Query: 468 RPSMTKVVEMLE 479
RP+ ++E +E
Sbjct: 304 RPNFAIILERIE 315
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 131/312 (41%), Gaps = 47/312 (15%)
Query: 190 LAPKRFSYSDVRRMTK---SFSDKLGQGGYADVYKGTL------PDGRLVAVKVMKNLKD 240
A K S SD++ + + + LG G + +VY+G + P VAVK + +
Sbjct: 55 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 114
Query: 241 NGEE--FINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGK 298
+E F+ E IS+ +H NIV +G + R ++ E M G L ++ + +
Sbjct: 115 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 174
Query: 299 -RTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP------KISDF 351
+L + +A IA G +YL +H DI N L CP KI DF
Sbjct: 175 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAKIGDF 228
Query: 352 GLAKQTEK----KESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
G+A+ + ++ +ML + ++ PE F G + K+D +S+G+++ E+
Sbjct: 229 GMARDIYRAGYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWEIF-- 280
Query: 408 RKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPD 467
S Y P K + +F G + K + + C Q P D
Sbjct: 281 ----------SLGYMPYP-SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPED 329
Query: 468 RPSMTKVVEMLE 479
RP+ ++E +E
Sbjct: 330 RPNFAIILERIE 341
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 19/204 (9%)
Query: 211 LGQGGYADVYKG--TLPDGR--LVAVKVMKN--LKDNGEEFINEVASISRTSHVNIVPFL 264
+G G + +V G LP R VA+K +K+ + +F++E + + + H N++
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
G + +I EFM NGSLD ++ ++G+ T+ + + GIA G++YL
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFL---RQNDGQFTV--IQLVGMLRGIAAGMKYL---A 152
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKES---FISMLDTRGTAGYIAPEVF 381
++ VH D+ NI ++ + K+SDFGL++ E S + S L + + APE
Sbjct: 153 DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 212
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMV 405
+ + SDV+SYG+++ E++
Sbjct: 213 --QYRKFTSASDVWSYGIVMWEVM 234
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 132/316 (41%), Gaps = 48/316 (15%)
Query: 186 NYGSLAPKRFSYSDVRRMTK---SFSDKLGQGGYADVYKGTL------PDGRLVAVKVMK 236
NY A K S SD++ + + + LG G + +VY+G + P VAVK +
Sbjct: 28 NY-CFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP 86
Query: 237 NLKDNGEE--FINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHES 294
+ +E F+ E IS+ +H NIV +G + R ++ E M G L ++ +
Sbjct: 87 EVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRP 146
Query: 295 SNGK-RTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP------K 347
+ +L + +A IA G +YL +H DI N L CP K
Sbjct: 147 RPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT---CPGPGRVAK 200
Query: 348 ISDFGLAKQTEKKESF----ISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHE 403
I DFG+A+ + + +ML + ++ PE F G + K+D +S+G+++ E
Sbjct: 201 IGDFGMARDIYRASYYRKGGCAMLPVK----WMPPEAFME--GIFTSKTDTWSFGVLLWE 254
Query: 404 MVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQT 463
+ S Y P K + +F G + K + + C Q
Sbjct: 255 IF------------SLGYMPYP-SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQH 301
Query: 464 HPPDRPSMTKVVEMLE 479
P DRP+ ++E +E
Sbjct: 302 QPEDRPNFAIILERIE 317
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 106/223 (47%), Gaps = 40/223 (17%)
Query: 211 LGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINE--VASISRTSHVNIVPFLG--- 265
+G+G Y VYKG+L D R VAVKV N + FINE + + H NI F+
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVFSFA--NRQNFINEKNIYRVPLMEHDNIARFIVGDE 77
Query: 266 --FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH-- 321
+ + L+ E+ PNGSL +Y+ H S +W + ++A + RGL YLH
Sbjct: 78 RVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-------DWVSSCRLAHSVTRGLAYLHTE 130
Query: 322 --RGCNIR--IVHLDIKPHNIRLDEDFCPKISDFGLA---------KQTEKKESFISMLD 368
RG + + I H D+ N+ + D ISDFGL+ + E+ + IS +
Sbjct: 131 LPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV- 189
Query: 369 TRGTAGYIAPEVF-----CRHFGGVSHKSDVYSYGMMIHEMVI 406
GT Y+APEV R + D+Y+ G++ E+ +
Sbjct: 190 --GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFM 230
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 111/231 (48%), Gaps = 30/231 (12%)
Query: 193 KRFSYSDVRRMTKSFSDKLGQGGYADVYKGTL----PDGRLVAVKVMKNLKDNGE----- 243
K S S VR F ++LG+ + VYKG L P + AV + K LKD E
Sbjct: 4 KEISLSAVR-----FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAI-KTLKDKAEGPLRE 57
Query: 244 EFINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIY------DHESSNG 297
EF +E +R H N+V LG + + ++I+ + +G L +++ D S++
Sbjct: 58 EFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD 117
Query: 298 KRT----LEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGL 353
RT LE + IA G+EYL + +VH D+ N+ + + KISD GL
Sbjct: 118 DRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGL 174
Query: 354 AKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEM 404
++ + + + ++ ++APE +G S SD++SYG+++ E+
Sbjct: 175 FREVYAADYYKLLGNSLLPIRWMAPEAIM--YGKFSIDSDIWSYGVVLWEV 223
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA G+ YL
Sbjct: 80 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAEGMNYLE- 131
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFGLAK +E + ++A E
Sbjct: 132 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 189
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 190 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 196 SYSDVRRMTKSFSDKL-----------GQGGYADVYKG--TLPDGRLVAVKVMKNLK--- 239
+Y D R F+ +L G G + +V G LP R VAV + K LK
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAI-KTLKVGY 83
Query: 240 --DNGEEFINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNG 297
+F+ E + + + H N+V G K ++ EFM NG+LD ++ H+
Sbjct: 84 TEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQF- 142
Query: 298 KRTLEWRTVYQIA---VGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLA 354
TV Q+ GIA G+ YL ++ VH D+ NI ++ + K+SDFGL+
Sbjct: 143 -------TVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLS 192
Query: 355 KQTEKK-ESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
+ E E+ + + + APE + + SDV+SYG+++ E++
Sbjct: 193 RVIEDDPEAVYTTTGGKIPVRWTAPEAI--QYRKFTSASDVWSYGIVMWEVM 242
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 122/264 (46%), Gaps = 33/264 (12%)
Query: 230 VAVKVMKN--LKDNGEEFINEVASISRTS-HVNIVPFLGFCYEKKKRALIYEFMPNGSLD 286
VAVK++K+ + + + I+E+ + H NI+ LG C + +I E+ G+L
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 163
Query: 287 QYIYDHE----------SSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPH 336
+Y+ S N + L + + A +ARG+EYL + + +H D+
Sbjct: 164 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 220
Query: 337 NIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE-VFCRHFGGVSHKSDVY 395
N+ + ED KI+DFGLA+ + + + R ++APE +F R + +H+SDV+
Sbjct: 221 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY---THQSDVW 277
Query: 396 SYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMIL 455
S+G+++ E+ + +P +E + +G ++ ++ +
Sbjct: 278 SFGVLLWEI----------FTLGGSPYPGV---PVEELFKLLKEGHRMDKPSNCTNELYM 324
Query: 456 VSLWCIQTHPPDRPSMTKVVEMLE 479
+ C P RP+ ++VE L+
Sbjct: 325 MMRDCWHAVPSQRPTFKQLVEDLD 348
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
++ R + KLG G + +V+ T VAVK MK + E F+ E + H
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 243
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V L K+ +I EFM GSL ++ E S K+ L + + IA G+
Sbjct: 244 KLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGS--KQPLP--KLIDFSAQIAEGMA 298
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
++ + +H D++ NI + KI+DFGLA+ E E + + + + AP
Sbjct: 299 FIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YTAREGAKFPIKWTAP 354
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMV 405
E +FG + KSDV+S+G+++ E+V
Sbjct: 355 EAI--NFGSFTIKSDVWSFGILLMEIV 379
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 21/220 (9%)
Query: 200 VRRMTKSFSDKLGQGGYADVYKGTL------PDGRLVAVKVMKNLKDNG-EEFINEVASI 252
++R +LG+G + V+ D LVAVK +K+ DN ++F E +
Sbjct: 10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELL 69
Query: 253 SRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDH-------ESSNGKRTLEWRT 305
+ H +IV F G C E +++E+M +G L++++ H N L
Sbjct: 70 TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQ 129
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+ IA IA G+ YL + VH D+ N + E+ KI DFG+++ + +
Sbjct: 130 MLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRV 186
Query: 366 MLDTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEM 404
T ++ PE + R F + +SDV+S G+++ E+
Sbjct: 187 GGHTMLPIRWMPPESIMYRKF---TTESDVWSLGVVLWEI 223
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 104/206 (50%), Gaps = 24/206 (11%)
Query: 211 LGQGGYADVYKGTLPDGR-----LVAVKVMKN--LKDNGEEFINEVASISRTSHVNIVPF 263
+G G + +VYKG L VA+K +K + +F+ E + + SH NI+
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAV--GIARGLEYLH 321
G + K +I E+M NG+LD+++ + + E+ + + + GIA G++YL
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDG-------EFSVLQLVGMLRGIAAGMKYL- 163
Query: 322 RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKK-ESFISMLDTRGTAGYIAPEV 380
N+ VH D+ NI ++ + K+SDFGL++ E E+ + + + APE
Sbjct: 164 --ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 221
Query: 381 FC-RHFGGVSHKSDVYSYGMMIHEMV 405
R F + SDV+S+G+++ E++
Sbjct: 222 ISYRKF---TSASDVWSFGIVMWEVM 244
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 35/232 (15%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFI 246
G P+ SY+D + +G G + VY+ L D G LVA+K K L+D + F
Sbjct: 47 GPDRPQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQD--KRFK 94
Query: 247 N-EVASISRTSHVNIVPFLGFCY---EKKKRA---LIYEFMPNGSLDQYIYDHESSNGKR 299
N E+ + + H NIV F Y EKK L+ +++P Y S K+
Sbjct: 95 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQ 151
Query: 300 TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFGLAKQTE 358
TL V + R L Y+H + I H DIKP N+ LD D K+ DFG AKQ
Sbjct: 152 TLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKS--DVYSYGMMIHEMVIGR 408
+ E +S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 209 RGEPNVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 35/232 (15%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFI 246
G P+ SY+D + +G G + VY+ L D G LVA+K K L+D + F
Sbjct: 18 GPDRPQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQD--KRFK 65
Query: 247 N-EVASISRTSHVNIVPFLGFCY---EKKKRA---LIYEFMPNGSLDQYIYDHESSNGKR 299
N E+ + + H NIV F Y EKK L+ +++P Y S K+
Sbjct: 66 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQ 122
Query: 300 TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFGLAKQTE 358
TL V + R L Y+H + I H DIKP N+ LD D K+ DFG AKQ
Sbjct: 123 TLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 179
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKS--DVYSYGMMIHEMVIGR 408
+ E +S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 180 RGEPNVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 123/266 (46%), Gaps = 37/266 (13%)
Query: 230 VAVKVMKN--LKDNGEEFINEVASISRT-SHVNIVPFLGFCYEKKKRALIYEFMPNGSLD 286
VAVK++K+ + + + I+E+ + H NI+ LG C + +I E+ G+L
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 111
Query: 287 QYIYDHE----------SSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPH 336
+Y+ S N + L + + A +ARG+EYL + + +H D+
Sbjct: 112 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 168
Query: 337 NIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE-VFCRHFGGVSHKSDVY 395
N+ + ED KI+DFGLA+ + + + R ++APE +F R + +H+SDV+
Sbjct: 169 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY---THQSDVW 225
Query: 396 SYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQL--DGVVTEEEKEMAKKM 453
S+G+++ E+ + Y + E F+L +G ++ ++
Sbjct: 226 SFGVLLWEIFT---------------LGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNEL 270
Query: 454 ILVSLWCIQTHPPDRPSMTKVVEMLE 479
++ C P RP+ ++VE L+
Sbjct: 271 YMMMRDCWHAVPSQRPTFKQLVEDLD 296
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 123/266 (46%), Gaps = 37/266 (13%)
Query: 230 VAVKVMKN--LKDNGEEFINEVASISRT-SHVNIVPFLGFCYEKKKRALIYEFMPNGSLD 286
VAVK++K+ + + + I+E+ + H NI+ LG C + +I E+ G+L
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 114
Query: 287 QYIYDHE----------SSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPH 336
+Y+ S N + L + + A +ARG+EYL + + +H D+
Sbjct: 115 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 171
Query: 337 NIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE-VFCRHFGGVSHKSDVY 395
N+ + ED KI+DFGLA+ + + + R ++APE +F R + +H+SDV+
Sbjct: 172 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY---THQSDVW 228
Query: 396 SYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQL--DGVVTEEEKEMAKKM 453
S+G+++ E+ + Y + E F+L +G ++ ++
Sbjct: 229 SFGVLLWEIFT---------------LGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNEL 273
Query: 454 ILVSLWCIQTHPPDRPSMTKVVEMLE 479
++ C P RP+ ++VE L+
Sbjct: 274 YMMMRDCWHAVPSQRPTFKQLVEDLD 299
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 209 DKLGQGGYADVYKGT-LPDGRLVAVKVMKNLKDN--GEEFINEVASISRTSHVNIVPFLG 265
+K+GQG VY + G+ VA++ M NL+ E INE+ + + NIV +L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ E++ GSL + + G+ R Q LE+LH
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ-------ALEFLHSN-- 135
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
+++H DIK NI L D K++DFG Q ++S S + GT ++APEV R
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM--VGTPYWMAPEVVTRKA 192
Query: 386 GGVSHKSDVYSYGMMIHEMVIG 407
G K D++S G+M EM+ G
Sbjct: 193 YG--PKVDIWSLGIMAIEMIEG 212
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 123/266 (46%), Gaps = 37/266 (13%)
Query: 230 VAVKVMKN--LKDNGEEFINEVASISRT-SHVNIVPFLGFCYEKKKRALIYEFMPNGSLD 286
VAVK++K+ + + + I+E+ + H NI+ LG C + +I E+ G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 287 QYIYDHE----------SSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPH 336
+Y+ S N + L + + A +ARG+EYL + + +H D+
Sbjct: 123 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 179
Query: 337 NIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE-VFCRHFGGVSHKSDVY 395
N+ + ED KI+DFGLA+ + + + R ++APE +F R + +H+SDV+
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY---THQSDVW 236
Query: 396 SYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQL--DGVVTEEEKEMAKKM 453
S+G+++ E+ + Y + E F+L +G ++ ++
Sbjct: 237 SFGVLLWEIFT---------------LGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNEL 281
Query: 454 ILVSLWCIQTHPPDRPSMTKVVEMLE 479
++ C P RP+ ++VE L+
Sbjct: 282 YMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 19/207 (9%)
Query: 207 FSDKLGQGGYADVYK---GTLPD--GRLVAVKVMKN-LKDNGEEFINEVASISRTSHVNI 260
F +LG+G + V L D G +VAVK +++ +++ +F E+ + H NI
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 261 VPFLGFCYEKKKR--ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
V + G CY +R LI E++P GSL Y+ H K ++ + Q I +G+E
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-----KERIDHIKLLQYTSQICKGME 128
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT-RGTAGYIA 377
YL R +H D+ NI ++ + KI DFGL K + + F + + + A
Sbjct: 129 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYA 185
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEM 404
PE V+ SDV+S+G++++E+
Sbjct: 186 PESLTESKFSVA--SDVWSFGVVLYEL 210
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V + L++ +E ++E ++ + ++
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 117 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 168
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFGLAK +E + ++A E
Sbjct: 169 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 226
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 227 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 35/232 (15%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFI 246
G P+ SY+D + +G G + VY+ L D G LVA+K K L+D + F
Sbjct: 14 GPDRPQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQD--KRFK 61
Query: 247 N-EVASISRTSHVNIVPFLGFCY---EKKKRA---LIYEFMPNGSLDQYIYDHESSNGKR 299
N E+ + + H NIV F Y EKK L+ +++P Y S K+
Sbjct: 62 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQ 118
Query: 300 TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFGLAKQTE 358
TL V + R L Y+H + I H DIKP N+ LD D K+ DFG AKQ
Sbjct: 119 TLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 175
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKS--DVYSYGMMIHEMVIGR 408
+ E +S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 176 RGEPNVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 35/232 (15%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFI 246
G P+ SY+D + +G G + VY+ L D G LVA+K K L+D + F
Sbjct: 41 GPDRPQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQD--KRFK 88
Query: 247 N-EVASISRTSHVNIVPFLGFCY---EKKKRA---LIYEFMPNGSLDQYIYDHESSNGKR 299
N E+ + + H NIV F Y EKK L+ +++P Y S K+
Sbjct: 89 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQ 145
Query: 300 TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFGLAKQTE 358
TL V + R L Y+H + I H DIKP N+ LD D K+ DFG AKQ
Sbjct: 146 TLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 202
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKS--DVYSYGMMIHEMVIGR 408
+ E +S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 203 RGEPNVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 35/232 (15%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFI 246
G P+ SY+D + +G G + VY+ L D G LVA+K K L+D + F
Sbjct: 13 GPDRPQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQD--KRFK 60
Query: 247 N-EVASISRTSHVNIVPFLGFCY---EKKKRA---LIYEFMPNGSLDQYIYDHESSNGKR 299
N E+ + + H NIV F Y EKK L+ +++P Y S K+
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQ 117
Query: 300 TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFGLAKQTE 358
TL V + R L Y+H + I H DIKP N+ LD D K+ DFG AKQ
Sbjct: 118 TLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKS--DVYSYGMMIHEMVIGR 408
+ E +S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 175 RGEPNVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
L G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 90 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 141
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFGLAK +E + ++A E
Sbjct: 142 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 200 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 209 DKLGQGGYADVYKGT-LPDGRLVAVKVMKNLKDN--GEEFINEVASISRTSHVNIVPFLG 265
+K+GQG VY + G+ VA++ M NL+ E INE+ + + NIV +L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ E++ GSL + + G+ R Q LE+LH
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ-------ALEFLHSN-- 135
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
+++H DIK NI L D K++DFG Q ++S S + GT ++APEV R
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM--VGTPYWMAPEVVTRKA 192
Query: 386 GGVSHKSDVYSYGMMIHEMVIG 407
G K D++S G+M EM+ G
Sbjct: 193 YG--PKVDIWSLGIMAIEMIEG 212
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 35/232 (15%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFI 246
G P+ SY+D + +G G + VY+ L D G LVA+K K L+D + F
Sbjct: 32 GPDRPQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQD--KRFK 79
Query: 247 N-EVASISRTSHVNIVPFLGFCY---EKKKRA---LIYEFMPNGSLDQYIYDHESSNGKR 299
N E+ + + H NIV F Y EKK L+ +++P Y S K+
Sbjct: 80 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQ 136
Query: 300 TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFGLAKQTE 358
TL V + R L Y+H + I H DIKP N+ LD D K+ DFG AKQ
Sbjct: 137 TLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 193
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKS--DVYSYGMMIHEMVIGR 408
+ E +S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 194 RGEPNVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 136
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFG AK +E + ++A E
Sbjct: 137 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 195 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 123/266 (46%), Gaps = 37/266 (13%)
Query: 230 VAVKVMKN--LKDNGEEFINEVASISRT-SHVNIVPFLGFCYEKKKRALIYEFMPNGSLD 286
VAVK++K+ + + + I+E+ + H NI+ LG C + +I E+ G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 287 QYIYDHE----------SSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPH 336
+Y+ S N + L + + A +ARG+EYL + + +H D+
Sbjct: 123 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 179
Query: 337 NIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE-VFCRHFGGVSHKSDVY 395
N+ + ED KI+DFGLA+ + + + R ++APE +F R + +H+SDV+
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY---THQSDVW 236
Query: 396 SYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQL--DGVVTEEEKEMAKKM 453
S+G+++ E+ + Y + E F+L +G ++ ++
Sbjct: 237 SFGVLLWEIFT---------------LGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNEL 281
Query: 454 ILVSLWCIQTHPPDRPSMTKVVEMLE 479
++ C P RP+ ++VE L+
Sbjct: 282 YMMMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 35/232 (15%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFI 246
G P+ SY+D + +G G + VY+ L D G LVA+K K L+D + F
Sbjct: 13 GPDRPQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQD--KRFK 60
Query: 247 N-EVASISRTSHVNIVPFLGFCY---EKKKRA---LIYEFMPNGSLDQYIYDHESSNGKR 299
N E+ + + H NIV F Y EKK L+ +++P Y S K+
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQ 117
Query: 300 TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFGLAKQTE 358
TL V + R L Y+H + I H DIKP N+ LD D K+ DFG AKQ
Sbjct: 118 TLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKS--DVYSYGMMIHEMVIGR 408
+ E +S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 175 RGEPNVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 35/232 (15%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFI 246
G P+ SY+D + +G G + VY+ L D G LVA+K K L+D + F
Sbjct: 21 GPDRPQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQD--KRFK 68
Query: 247 N-EVASISRTSHVNIVPFLGFCY---EKKKRA---LIYEFMPNGSLDQYIYDHESSNGKR 299
N E+ + + H NIV F Y EKK L+ +++P Y S K+
Sbjct: 69 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQ 125
Query: 300 TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFGLAKQTE 358
TL V + R L Y+H + I H DIKP N+ LD D K+ DFG AKQ
Sbjct: 126 TLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 182
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKS--DVYSYGMMIHEMVIGR 408
+ E +S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 183 RGEPNVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 136
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFG AK +E + ++A E
Sbjct: 137 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 195 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 35/232 (15%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFI 246
G P+ SY+D + +G G + VY+ L D G LVA+K K L+D + F
Sbjct: 25 GPDRPQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQD--KRFK 72
Query: 247 N-EVASISRTSHVNIVPFLGFCY---EKKKRA---LIYEFMPNGSLDQYIYDHESSNGKR 299
N E+ + + H NIV F Y EKK L+ +++P Y S K+
Sbjct: 73 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQ 129
Query: 300 TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFGLAKQTE 358
TL V + R L Y+H + I H DIKP N+ LD D K+ DFG AKQ
Sbjct: 130 TLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 186
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKS--DVYSYGMMIHEMVIGR 408
+ E +S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 187 RGEPNVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 123/266 (46%), Gaps = 37/266 (13%)
Query: 230 VAVKVMKN--LKDNGEEFINEVASISRT-SHVNIVPFLGFCYEKKKRALIYEFMPNGSLD 286
VAVK++K+ + + + I+E+ + H NI+ LG C + +I E+ G+L
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 115
Query: 287 QYIYDHE----------SSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPH 336
+Y+ S N + L + + A +ARG+EYL + + +H D+
Sbjct: 116 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 172
Query: 337 NIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE-VFCRHFGGVSHKSDVY 395
N+ + ED KI+DFGLA+ + + + R ++APE +F R + +H+SDV+
Sbjct: 173 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY---THQSDVW 229
Query: 396 SYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQL--DGVVTEEEKEMAKKM 453
S+G+++ E+ + Y + E F+L +G ++ ++
Sbjct: 230 SFGVLLWEIFT---------------LGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNEL 274
Query: 454 ILVSLWCIQTHPPDRPSMTKVVEMLE 479
++ C P RP+ ++VE L+
Sbjct: 275 YMMMRDCWHAVPSQRPTFKQLVEDLD 300
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 35/232 (15%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFI 246
G P+ SY+D + +G G + VY+ L D G LVA+K K L+D + F
Sbjct: 25 GPDRPQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQD--KRFK 72
Query: 247 N-EVASISRTSHVNIVPFLGFCY---EKKKRA---LIYEFMPNGSLDQYIYDHESSNGKR 299
N E+ + + H NIV F Y EKK L+ +++P Y S K+
Sbjct: 73 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQ 129
Query: 300 TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFGLAKQTE 358
TL V + R L Y+H + I H DIKP N+ LD D K+ DFG AKQ
Sbjct: 130 TLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 186
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKS--DVYSYGMMIHEMVIGR 408
+ E +S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 187 RGEPNVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 209 DKLGQGGYADVYKGT-LPDGRLVAVKVMKNLKDN--GEEFINEVASISRTSHVNIVPFLG 265
+K+GQG VY + G+ VA++ M NL+ E INE+ + + NIV +L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ E++ GSL + + G+ R Q LE+LH
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ-------ALEFLHSN-- 135
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
+++H DIK NI L D K++DFG Q ++S S + GT ++APEV R
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS--EMVGTPYWMAPEVVTRKA 192
Query: 386 GGVSHKSDVYSYGMMIHEMVIG 407
G K D++S G+M EM+ G
Sbjct: 193 YG--PKVDIWSLGIMAIEMIEG 212
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 123/266 (46%), Gaps = 37/266 (13%)
Query: 230 VAVKVMKN--LKDNGEEFINEVASISRT-SHVNIVPFLGFCYEKKKRALIYEFMPNGSLD 286
VAVK++K+ + + + I+E+ + H NI+ LG C + +I E+ G+L
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 107
Query: 287 QYIYDHE----------SSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPH 336
+Y+ S N + L + + A +ARG+EYL + + +H D+
Sbjct: 108 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 164
Query: 337 NIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE-VFCRHFGGVSHKSDVY 395
N+ + ED KI+DFGLA+ + + + R ++APE +F R + +H+SDV+
Sbjct: 165 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY---THQSDVW 221
Query: 396 SYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQL--DGVVTEEEKEMAKKM 453
S+G+++ E+ + Y + E F+L +G ++ ++
Sbjct: 222 SFGVLLWEIFT---------------LGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNEL 266
Query: 454 ILVSLWCIQTHPPDRPSMTKVVEMLE 479
++ C P RP+ ++VE L+
Sbjct: 267 YMMMRDCWHAVPSQRPTFKQLVEDLD 292
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 35/232 (15%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFI 246
G P+ SY+D + +G G + VY+ L D G LVA+K K L+D + F
Sbjct: 47 GPDRPQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQD--KRFK 94
Query: 247 N-EVASISRTSHVNIVPFLGFCY---EKKKRA---LIYEFMPNGSLDQYIYDHESSNGKR 299
N E+ + + H NIV F Y EKK L+ +++P Y S K+
Sbjct: 95 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQ 151
Query: 300 TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFGLAKQTE 358
TL V + R L Y+H + I H DIKP N+ LD D K+ DFG AKQ
Sbjct: 152 TLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKS--DVYSYGMMIHEMVIGR 408
+ E +S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 209 RGEPNVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 209 DKLGQGGYADVYKGT-LPDGRLVAVKVMKNLKDN--GEEFINEVASISRTSHVNIVPFLG 265
+K+GQG VY + G+ VA++ M NL+ E INE+ + + NIV +L
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLD 85
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ E++ GSL + + G+ R Q LE+LH
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ-------ALEFLHSN-- 136
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
+++H DIK NI L D K++DFG Q ++S S + GT ++APEV R
Sbjct: 137 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM--VGTPYWMAPEVVTRKA 193
Query: 386 GGVSHKSDVYSYGMMIHEMVIG 407
G K D++S G+M EM+ G
Sbjct: 194 YG--PKVDIWSLGIMAIEMIEG 213
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 138
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFG AK +E + ++A E
Sbjct: 139 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 197 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 35/232 (15%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFI 246
G P+ SY+D + +G G + VY+ L D G LVA+K K L+D + F
Sbjct: 17 GPDRPQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQD--KRFK 64
Query: 247 N-EVASISRTSHVNIVPFLGFCY---EKKKRA---LIYEFMPNGSLDQYIYDHESSNGKR 299
N E+ + + H NIV F Y EKK L+ +++P Y S K+
Sbjct: 65 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQ 121
Query: 300 TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFGLAKQTE 358
TL V + R L Y+H + I H DIKP N+ LD D K+ DFG AKQ
Sbjct: 122 TLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 178
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKS--DVYSYGMMIHEMVIGR 408
+ E +S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 179 RGEPNVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 104/214 (48%), Gaps = 31/214 (14%)
Query: 206 SFSDKLGQGGYADVYKG--TLPDGRLVAVKVMKNLK-----DNGEEFINEVASISRTSHV 258
S +G G + +V G LP + ++V + K LK +F+ E + + + H
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIA---VGIAR 315
NI+ G + K ++ E+M NGSLD ++ H++ TV Q+ GIA
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLVGMLRGIAS 158
Query: 316 GLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRG---T 372
G++YL ++ VH D+ NI ++ + K+SDFGLA+ E + TRG
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPE--AAYTTRGGKIP 213
Query: 373 AGYIAPEVFC-RHFGGVSHKSDVYSYGMMIHEMV 405
+ +PE R F + SDV+SYG+++ E++
Sbjct: 214 IRWTSPEAIAYRKF---TSASDVWSYGIVLWEVM 244
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
L G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 141
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFGLAK +E + ++A E
Sbjct: 142 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 200 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 35/232 (15%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFI 246
G P+ SY+D + +G G + VY+ L D G LVA+K K L+D + F
Sbjct: 26 GPDRPQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQD--KRFK 73
Query: 247 N-EVASISRTSHVNIVPFLGFCY---EKKKRA---LIYEFMPNGSLDQYIYDHESSNGKR 299
N E+ + + H NIV F Y EKK L+ +++P Y S K+
Sbjct: 74 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQ 130
Query: 300 TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFGLAKQTE 358
TL V + R L Y+H + I H DIKP N+ LD D K+ DFG AKQ
Sbjct: 131 TLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 187
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKS--DVYSYGMMIHEMVIGR 408
+ E +S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 188 RGEPNVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 35/232 (15%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFI 246
G P+ SY+D + +G G + VY+ L D G LVA+K K L+D + F
Sbjct: 92 GPDRPQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQD--KRFK 139
Query: 247 N-EVASISRTSHVNIVPFLGFCY---EKKKRA---LIYEFMPNGSLDQYIYDHESSNGKR 299
N E+ + + H NIV F Y EKK L+ +++P Y S K+
Sbjct: 140 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQ 196
Query: 300 TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFGLAKQTE 358
TL V + R L Y+H + I H DIKP N+ LD D K+ DFG AKQ
Sbjct: 197 TLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 253
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKS--DVYSYGMMIHEMVIGR 408
+ E +S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 254 RGEPNVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 35/232 (15%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFI 246
G P+ SY+D + +G G + VY+ L D G LVA+K K L+D + F
Sbjct: 49 GPDRPQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQD--KRFK 96
Query: 247 N-EVASISRTSHVNIVPFLGFCY---EKKKRA---LIYEFMPNGSLDQYIYDHESSNGKR 299
N E+ + + H NIV F Y EKK L+ +++P Y S K+
Sbjct: 97 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQ 153
Query: 300 TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFGLAKQTE 358
TL V + R L Y+H + I H DIKP N+ LD D K+ DFG AKQ
Sbjct: 154 TLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 210
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKS--DVYSYGMMIHEMVIGR 408
+ E +S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 211 RGEPNVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 23/212 (10%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +PDG V + V +K L++N +E ++E ++ +
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + L+ + MP G L ++ ++ G + L W + IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQIAKGMSYLE- 136
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE-VF 381
++R+VH D+ N+ + KI+DFGLA+ + E+ + ++A E +
Sbjct: 137 --DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL 194
Query: 382 CRHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
R F +H+SDV+SYG+ + E M G K D
Sbjct: 195 RRRF---THQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 136
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFG AK +E + ++A E
Sbjct: 137 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 195 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
L G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 134
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFGLAK +E + ++A E
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 193 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 35/232 (15%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFI 246
G P+ SY+D + +G G + VY+ L D G LVA+K K L+D + F
Sbjct: 51 GPDRPQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQD--KRFK 98
Query: 247 N-EVASISRTSHVNIVPFLGFCY---EKKKRA---LIYEFMPNGSLDQYIYDHESSNGKR 299
N E+ + + H NIV F Y EKK L+ +++P Y S K+
Sbjct: 99 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQ 155
Query: 300 TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFGLAKQTE 358
TL V + R L Y+H + I H DIKP N+ LD D K+ DFG AKQ
Sbjct: 156 TLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 212
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKS--DVYSYGMMIHEMVIGR 408
+ E +S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 213 RGEPNVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 35/232 (15%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFI 246
G P+ SY+D + +G G + VY+ L D G LVA+K K L+D + F
Sbjct: 13 GPDRPQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQD--KRFK 60
Query: 247 N-EVASISRTSHVNIVPFLGFCY---EKKKRA---LIYEFMPNGSLDQYIYDHESSNGKR 299
N E+ + + H NIV F Y EKK L+ +++P Y S K+
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQ 117
Query: 300 TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFGLAKQTE 358
TL V + R L Y+H + I H DIKP N+ LD D K+ DFG AKQ
Sbjct: 118 TLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKS--DVYSYGMMIHEMVIGR 408
+ E +S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 175 RGEPNVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 134
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFG AK +E + ++A E
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 193 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 111/246 (45%), Gaps = 43/246 (17%)
Query: 211 LGQGGYADVYKG-TLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCYE 269
LGQG + V K D R A+K +++ ++ ++EV ++ +H +V + E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 270 K----------KKRALIY---EFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARG 316
+ KK++ ++ E+ N +L I+ E+ N +R WR QI
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHS-ENLNQQRDEYWRLFRQIL----EA 128
Query: 317 LEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR------ 370
L Y+H I+H D+KP NI +DE KI DFGLAK + + LD++
Sbjct: 129 LSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK-LDSQNLPGSS 184
Query: 371 -------GTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMV------IGRKNADVKVSC 417
GTA Y+A EV G + K D+YS G++ EM+ + R N K+
Sbjct: 185 DNLTSAIGTAMYVATEVL-DGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRS 243
Query: 418 SSEYFP 423
S FP
Sbjct: 244 VSIEFP 249
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 21/211 (9%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDN-----GEEFINEVASISRTSHVNIVPF 263
LG G + VYKG +P+G V + V +K L++ +E ++E ++ + ++
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKR-TLEWRTVYQIAVGIARGLEYLHR 322
LG C + LI + MP G L Y+ +H+ + G + L W V IA+G+ YL
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 141
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ R+VH D+ N+ + KI+DFG AK +E + ++A E
Sbjct: 142 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 383 RHFGGVSHKSDVYSYGMMIHE-MVIGRKNAD 412
+H+SDV+SYG+ + E M G K D
Sbjct: 200 HRI--YTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 35/232 (15%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFI 246
G P+ SY+D + +G G + VY+ L D G LVA+K K L+ G+ F
Sbjct: 13 GPDRPQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQ--GKAFK 60
Query: 247 N-EVASISRTSHVNIVPFLGFCY---EKKKRA---LIYEFMPNGSLDQYIYDHESSNGKR 299
N E+ + + H NIV F Y EKK L+ +++P Y S K+
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQ 117
Query: 300 TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFGLAKQTE 358
TL V + R L Y+H + I H DIKP N+ LD D K+ DFG AKQ
Sbjct: 118 TLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKS--DVYSYGMMIHEMVIGR 408
+ E +S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 175 RGEPNVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 106/208 (50%), Gaps = 28/208 (13%)
Query: 211 LGQGGYADVY---KGTLPD-GRLVAVKVMKNLKDNGEEFINEVASISRTSHVN--IVPFL 264
LGQG + V+ K T PD G L A+KV+K + + + VN V L
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 265 GFCYEKK-KRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRG 323
+ ++ + K LI +F+ G L + S T E Y +A GL++LH
Sbjct: 96 HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFY--LAELALGLDHLH-- 147
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT---EKKE-SFISMLDTRGTAGYIAPE 379
++ I++ D+KP NI LDE+ K++DFGL+K+ EKK SF GT Y+APE
Sbjct: 148 -SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC------GTVEYMAPE 200
Query: 380 VFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
V R G SH +D +SYG+++ EM+ G
Sbjct: 201 VVNRQ--GHSHSADWWSYGVLMFEMLTG 226
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 35/232 (15%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFI 246
G P+ SY+D + +G G + VY+ L D G LVA+K K L+D + F
Sbjct: 13 GPDRPQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQD--KRFK 60
Query: 247 N-EVASISRTSHVNIVPFLGFCY---EKKKRA---LIYEFMPNGSLDQYIYDHESSNGKR 299
N E+ + + H NIV F Y EKK L+ +++P Y S K+
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETV---YRVARHYSRAKQ 117
Query: 300 TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFGLAKQTE 358
TL V + R L Y+H + I H DIKP N+ LD D K+ DFG AKQ
Sbjct: 118 TLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKS--DVYSYGMMIHEMVIGR 408
+ E +S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 175 RGEPNVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 35/232 (15%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFI 246
G P+ SY+D + +G G + VY+ L D G LVA+K K L+ G+ F
Sbjct: 13 GPDRPQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQ--GKAFK 60
Query: 247 N-EVASISRTSHVNIVPFLGFCY---EKKKRA---LIYEFMPNGSLDQYIYDHESSNGKR 299
N E+ + + H NIV F Y EKK L+ +++P Y S K+
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATV---YRVARHYSRAKQ 117
Query: 300 TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFGLAKQTE 358
TL V + R L Y+H + I H DIKP N+ LD D K+ DFG AKQ
Sbjct: 118 TLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKS--DVYSYGMMIHEMVIGR 408
+ E +S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 175 RGEPNVSXICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 135/313 (43%), Gaps = 39/313 (12%)
Query: 186 NYGSLAPKRFSYSD---VRRMTKSFSDKLGQGGYADVYKGTL-----PDGRL-VAVKVMK 236
+Y + P + Y++ R F LG G + V + T D L VAVK++K
Sbjct: 18 SYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK 77
Query: 237 NLK--DNGEEFINEVASISRT-SHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYI---- 289
+ D E ++E+ +S H NIV LG C +I E+ G L ++
Sbjct: 78 STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKA 137
Query: 290 -YDHESSNGKRTLEWRTVYQIAVGIARGLEYL-HRGCNIRIVHLDIKPHNIRLDEDFCPK 347
D + +G R LE R + + +A+G+ +L + C +H D+ N+ L K
Sbjct: 138 EADLDKEDG-RPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAK 192
Query: 348 ISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGV-SHKSDVYSYGMMIHEMVI 406
I DFGLA+ ++I + R ++APE F V + +SDV+SYG+++ E+
Sbjct: 193 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI---FDCVYTVQSDVWSYGILLWEIFS 249
Query: 407 GRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPP 466
N + +S++ YK ++ DG + K + + C P
Sbjct: 250 LGLNPYPGILVNSKF-----YKLVK-------DGYQMAQPAFAPKNIYSIMQACWALEPT 297
Query: 467 DRPSMTKVVEMLE 479
RP+ ++ L+
Sbjct: 298 HRPTFQQICSFLQ 310
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 35/232 (15%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFI 246
G P+ SY+D + +G G + VY+ L D G LVA+K K L+ G+ F
Sbjct: 13 GPDRPQEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIK--KVLQ--GKAFK 60
Query: 247 N-EVASISRTSHVNIVPFLGFCY---EKKKRA---LIYEFMPNGSLDQYIYDHESSNGKR 299
N E+ + + H NIV F Y EKK L+ +++P Y S K+
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETV---YRVARHYSRAKQ 117
Query: 300 TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFGLAKQTE 358
TL V + R L Y+H + I H DIKP N+ LD D K+ DFG AKQ
Sbjct: 118 TLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKS--DVYSYGMMIHEMVIGR 408
+ E +S + +R Y APE+ FG + S DV+S G ++ E+++G+
Sbjct: 175 RGEPNVSYICSR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 31/214 (14%)
Query: 206 SFSDKLGQGGYADVYKG--TLPDGRLVAVKVMKNLK-----DNGEEFINEVASISRTSHV 258
S +G G + +V G LP + ++V + K LK +F+ E + + + H
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIA---VGIAR 315
NI+ G + K ++ E+M NGSLD ++ H++ TV Q+ GIA
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLVGMLRGIAS 158
Query: 316 GLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRG---T 372
G++YL ++ VH D+ NI ++ + K+SDFGL++ E + TRG
Sbjct: 159 GMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIP 213
Query: 373 AGYIAPEVFC-RHFGGVSHKSDVYSYGMMIHEMV 405
+ +PE R F + SDV+SYG+++ E++
Sbjct: 214 IRWTSPEAIAYRKF---TSASDVWSYGIVLWEVM 244
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 31/214 (14%)
Query: 206 SFSDKLGQGGYADVYKG--TLPDGRLVAVKVMKNLK-----DNGEEFINEVASISRTSHV 258
S +G G + +V G LP + ++V + K LK +F+ E + + + H
Sbjct: 36 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHP 94
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIA---VGIAR 315
NI+ G + K ++ E+M NGSLD ++ H++ TV Q+ GIA
Sbjct: 95 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLVGMLRGIAS 146
Query: 316 GLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRG---T 372
G++YL ++ VH D+ NI ++ + K+SDFGL++ E + TRG
Sbjct: 147 GMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIP 201
Query: 373 AGYIAPEVFC-RHFGGVSHKSDVYSYGMMIHEMV 405
+ +PE R F + SDV+SYG+++ E++
Sbjct: 202 IRWTSPEAIAYRKF---TSASDVWSYGIVLWEVM 232
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 31/214 (14%)
Query: 206 SFSDKLGQGGYADVYKG--TLPDGRLVAVKVMKNLK-----DNGEEFINEVASISRTSHV 258
S +G G + +V G LP + ++V + K LK +F+ E + + + H
Sbjct: 19 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIA---VGIAR 315
NI+ G + K ++ E+M NGSLD ++ H++ TV Q+ GIA
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLVGMLRGIAS 129
Query: 316 GLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRG---T 372
G++YL ++ VH D+ NI ++ + K+SDFGL++ E + TRG
Sbjct: 130 GMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIP 184
Query: 373 AGYIAPEVFC-RHFGGVSHKSDVYSYGMMIHEMV 405
+ +PE R F + SDV+SYG+++ E++
Sbjct: 185 IRWTSPEAIAYRKF---TSASDVWSYGIVLWEVM 215
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 19/207 (9%)
Query: 207 FSDKLGQGGYADVYK---GTLPD--GRLVAVKVMKN-LKDNGEEFINEVASISRTSHVNI 260
F +LG+G + V L D G +VAVK +++ +++ +F E+ + H NI
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 261 VPFLGFCYEKKKR--ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
V + G CY +R LI EF+P GSL +Y+ H K ++ + Q I +G+E
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKH-----KERIDHIKLLQYTSQICKGME 131
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT-EKKESFISMLDTRGTAGYIA 377
YL R +H D+ NI ++ + KI DFGL K + KE + A
Sbjct: 132 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEM 404
PE V+ SDV+S+G++++E+
Sbjct: 189 PESLTESKFSVA--SDVWSFGVVLYEL 213
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 121/264 (45%), Gaps = 33/264 (12%)
Query: 230 VAVKVMKN--LKDNGEEFINEVASISRT-SHVNIVPFLGFCYEKKKRALIYEFMPNGSLD 286
VAVK++K+ + + + I+E+ + H NI+ LG C + +I E+ G+L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 287 QYIYDHE----------SSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPH 336
+Y+ S N + L + + A +ARG+EYL + + +H D+
Sbjct: 123 EYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAAR 179
Query: 337 NIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE-VFCRHFGGVSHKSDVY 395
N+ + ED KI+DFGLA+ + + R ++APE +F R + +H+SDV+
Sbjct: 180 NVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIY---THQSDVW 236
Query: 396 SYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMIL 455
S+G+++ E+ + +P +E + +G ++ ++ +
Sbjct: 237 SFGVLLWEI----------FTLGGSPYPGV---PVEELFKLLKEGHRMDKPSNCTNELYM 283
Query: 456 VSLWCIQTHPPDRPSMTKVVEMLE 479
+ C P RP+ ++VE L+
Sbjct: 284 MMRDCWHAVPSQRPTFKQLVEDLD 307
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 108/241 (44%), Gaps = 29/241 (12%)
Query: 209 DKLGQGGYADVYKGT--LPDGRLVAVKVMKNLKDNGE--EFINEVASISRTSHVNIVPFL 264
DKLG+G YA VYKG L D LVA+K ++ + G I EV+ + H NIV
Sbjct: 8 DKLGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ +K L++E++ + L QY+ D + V + RGL Y HR
Sbjct: 67 DIIHTEKSLTLVFEYL-DKDLKQYLDD-----CGNIINMHNVKLFLFQLLRGLAYCHRQ- 119
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRH 384
+++H D+KP N+ ++E K++DFGLA+ K D + P
Sbjct: 120 --KVLHRDLKPQNLLINERGELKLADFGLARA---KSIPTKTYDNEVVTLWYRPPDILLG 174
Query: 385 FGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTE 444
S + D++ G + +EM GR FP + ++ + + F++ G TE
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGRP-----------LFPGSTVEE-QLHFIFRILGTPTE 222
Query: 445 E 445
E
Sbjct: 223 E 223
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 23/204 (11%)
Query: 210 KLGQGGYADVYKGTLPD-GRLVAVKVMKNL-KDNGEEFINEVASISRTSHVNIVPFLGFC 267
+LG G + VYK + G L A KV++ ++ E++I E+ ++ H IV LG
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 268 YEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIR 327
Y K ++ EF P G++D + + + R L T QI V + LE L+ + R
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELD-----RGL---TEPQIQVVCRQMLEALNFLHSKR 129
Query: 328 IVHLDIKPHNIRLDEDFCPKISDFGLA----KQTEKKESFISMLDTRGTAGYIAPE-VFC 382
I+H D+K N+ + + +++DFG++ K +K++SFI GT ++APE V C
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPEVVMC 183
Query: 383 RHFGGV--SHKSDVYSYGMMIHEM 404
+K+D++S G+ + EM
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEM 207
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 135/313 (43%), Gaps = 39/313 (12%)
Query: 186 NYGSLAPKRFSYSD---VRRMTKSFSDKLGQGGYADVYKGTL-----PDGRL-VAVKVMK 236
+Y + P + Y++ R F LG G + V + T D L VAVK++K
Sbjct: 26 SYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK 85
Query: 237 NLK--DNGEEFINEVASISRT-SHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYI---- 289
+ D E ++E+ +S H NIV LG C +I E+ G L ++
Sbjct: 86 STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKA 145
Query: 290 -YDHESSNGKRTLEWRTVYQIAVGIARGLEYL-HRGCNIRIVHLDIKPHNIRLDEDFCPK 347
D + +G R LE R + + +A+G+ +L + C +H D+ N+ L K
Sbjct: 146 EADLDKEDG-RPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAK 200
Query: 348 ISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGV-SHKSDVYSYGMMIHEMVI 406
I DFGLA+ ++I + R ++APE F V + +SDV+SYG+++ E+
Sbjct: 201 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI---FDCVYTVQSDVWSYGILLWEIFS 257
Query: 407 GRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPP 466
N + +S++ YK ++ DG + K + + C P
Sbjct: 258 LGLNPYPGILVNSKF-----YKLVK-------DGYQMAQPAFAPKNIYSIMQACWALEPT 305
Query: 467 DRPSMTKVVEMLE 479
RP+ ++ L+
Sbjct: 306 HRPTFQQICSFLQ 318
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 23/204 (11%)
Query: 210 KLGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNG-EEFINEVASISRTSHVNIVPFLGFC 267
+LG G + VYK + G L A KV++ + E++I E+ ++ H IV LG
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 268 YEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIR 327
Y K ++ EF P G++D + + + R L T QI V + LE L+ + R
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELD-----RGL---TEPQIQVVCRQMLEALNFLHSKR 137
Query: 328 IVHLDIKPHNIRLDEDFCPKISDFGLA----KQTEKKESFISMLDTRGTAGYIAPE-VFC 382
I+H D+K N+ + + +++DFG++ K +K++SFI GT ++APE V C
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPEVVMC 191
Query: 383 RHFGGV--SHKSDVYSYGMMIHEM 404
+K+D++S G+ + EM
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEM 215
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 104/204 (50%), Gaps = 19/204 (9%)
Query: 211 LGQGGYADVYKG--TLPDGR--LVAVKVMKN--LKDNGEEFINEVASISRTSHVNIVPFL 264
+G G + +V G LP R VA+K +K+ + +F++E + + + H N++
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
G + +I EFM NGSLD ++ ++G+ T+ + + GIA G++YL
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFL---RQNDGQFTV--IQLVGMLRGIAAGMKYL---A 126
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKES---FISMLDTRGTAGYIAPEVF 381
++ VH + NI ++ + K+SDFGL++ E S + S L + + APE
Sbjct: 127 DMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 186
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMV 405
+ + SDV+SYG+++ E++
Sbjct: 187 --QYRKFTSASDVWSYGIVMWEVM 208
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 31/214 (14%)
Query: 206 SFSDKLGQGGYADVYKG--TLPDGRLVAVKVMKNLK-----DNGEEFINEVASISRTSHV 258
S +G G + +V G LP + ++V + K LK +F+ E + + + H
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIA---VGIAR 315
NI+ G + K ++ E+M NGSLD ++ H++ TV Q+ GIA
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLVGMLRGIAS 158
Query: 316 GLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRG---T 372
G++YL ++ VH D+ NI ++ + K+SDFGL++ E + TRG
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIP 213
Query: 373 AGYIAPEVFC-RHFGGVSHKSDVYSYGMMIHEMV 405
+ +PE R F + SDV+SYG+++ E++
Sbjct: 214 IRWTSPEAIAYRKF---TSASDVWSYGIVLWEVM 244
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 31/214 (14%)
Query: 206 SFSDKLGQGGYADVYKG--TLPDGRLVAVKVMKNLK-----DNGEEFINEVASISRTSHV 258
S +G G + +V G LP + ++V + K LK +F+ E + + + H
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIA---VGIAR 315
NI+ G + K ++ E+M NGSLD ++ H++ TV Q+ GIA
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLVGMLRGIAS 158
Query: 316 GLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRG---T 372
G++YL ++ VH D+ NI ++ + K+SDFGL++ E + TRG
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIP 213
Query: 373 AGYIAPEVFC-RHFGGVSHKSDVYSYGMMIHEMV 405
+ +PE R F + SDV+SYG+++ E++
Sbjct: 214 IRWTSPEAIAYRKF---TSASDVWSYGIVLWEVM 244
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 31/214 (14%)
Query: 206 SFSDKLGQGGYADVYKG--TLPDGRLVAVKVMKNLK-----DNGEEFINEVASISRTSHV 258
S +G G + +V G LP + ++V + K LK +F+ E + + + H
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIA---VGIAR 315
NI+ G + K ++ E+M NGSLD ++ H++ TV Q+ GIA
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLVGMLRGIAS 158
Query: 316 GLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRG---T 372
G++YL ++ VH D+ NI ++ + K+SDFGL++ E + TRG
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIP 213
Query: 373 AGYIAPEVFC-RHFGGVSHKSDVYSYGMMIHEMV 405
+ +PE R F + SDV+SYG+++ E++
Sbjct: 214 IRWTSPEAIAYRKF---TSASDVWSYGIVLWEVM 244
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 31/214 (14%)
Query: 206 SFSDKLGQGGYADVYKG--TLPDGRLVAVKVMKNLK-----DNGEEFINEVASISRTSHV 258
S +G G + +V G LP + ++V + K LK +F+ E + + + H
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIA---VGIAR 315
NI+ G + K ++ E+M NGSLD ++ H++ TV Q+ GIA
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLVGMLRGIAS 158
Query: 316 GLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRG---T 372
G++YL ++ VH D+ NI ++ + K+SDFGL++ E + TRG
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIP 213
Query: 373 AGYIAPEVFC-RHFGGVSHKSDVYSYGMMIHEMV 405
+ +PE R F + SDV+SYG+++ E++
Sbjct: 214 IRWTSPEAIAYRKF---TSASDVWSYGIVLWEVM 244
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 128/272 (47%), Gaps = 34/272 (12%)
Query: 211 LGQGGYADVYKG-TLPDGRLVAVKVM--KNLKDNG--EEFINEVASISRTSHVNIVPFLG 265
LG+G +A VY+ ++ G VA+K++ K + G + NEV + H +I+
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ + L+ E NG +++Y+ N + I G+ YLH
Sbjct: 79 YFEDSNYVYLVLEMCHNGEMNRYL-----KNRVKPFSENEARHFMHQIITGMLYLHSHG- 132
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEK-KESFISMLDTRGTAGYIAPEVFCRH 384
I+H D+ N+ L + KI+DFGLA Q + E ++ GT YI+PE+ R
Sbjct: 133 --ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC---GTPNYISPEIATRS 187
Query: 385 FGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTE 444
G+ +SDV+S G M + ++IGR D ++ N + K + D+++ ++
Sbjct: 188 AHGL--ESDVWSLGCMFYTLLIGRPPFD------TDTVKNTLNKVVLA--DYEMPSFLSI 237
Query: 445 EEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
E K++ ++ ++ +P DR S++ V++
Sbjct: 238 EAKDLIHQL-------LRRNPADRLSLSSVLD 262
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 31/214 (14%)
Query: 206 SFSDKLGQGGYADVYKG--TLPDGRLVAVKVMKNLK-----DNGEEFINEVASISRTSHV 258
S +G G + +V G LP + ++V + K LK +F+ E + + + H
Sbjct: 46 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHP 104
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIA---VGIAR 315
NI+ G + K ++ E+M NGSLD ++ H++ TV Q+ GIA
Sbjct: 105 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLVGMLRGIAS 156
Query: 316 GLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRG---T 372
G++YL ++ VH D+ NI ++ + K+SDFGL++ E + TRG
Sbjct: 157 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIP 211
Query: 373 AGYIAPEVFC-RHFGGVSHKSDVYSYGMMIHEMV 405
+ +PE R F + SDV+SYG+++ E++
Sbjct: 212 IRWTSPEAIAYRKF---TSASDVWSYGIVLWEVM 242
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 28/208 (13%)
Query: 227 GRLVAVKVMKNLKDNGEEFI----NEVASISRTSHVNIVPFLGFCYEKKKRA--LIYEFM 280
G VAVK +K ++G I E+ + H NIV + G C E LI EF+
Sbjct: 38 GEQVAVKSLK--PESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 95
Query: 281 PNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRL 340
P+GSL +Y+ K + + + AV I +G++YL + + VH D+ N+ +
Sbjct: 96 PSGSLKEYL-----PKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLV 147
Query: 341 DEDFCPKISDFGLAKQTEKKESFISMLDTRGT-AGYIAPEVFCRHFGGVSHKSDVYSYGM 399
+ + KI DFGL K E + ++ D R + + APE + ++ SDV+S+G+
Sbjct: 148 ESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIA--SDVWSFGV 205
Query: 400 MIHEMVIGRKNADVKVSCSSEYFPNAIY 427
+HE++ C S+ P A++
Sbjct: 206 TLHELL---------TYCDSDSSPMALF 224
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 28/208 (13%)
Query: 227 GRLVAVKVMKNLKDNGEEFI----NEVASISRTSHVNIVPFLGFCYEKKKRA--LIYEFM 280
G VAVK +K ++G I E+ + H NIV + G C E LI EF+
Sbjct: 50 GEQVAVKSLK--PESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 107
Query: 281 PNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRL 340
P+GSL +Y+ K + + + AV I +G++YL + + VH D+ N+ +
Sbjct: 108 PSGSLKEYL-----PKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLV 159
Query: 341 DEDFCPKISDFGLAKQTEKKESFISMLDTRGT-AGYIAPEVFCRHFGGVSHKSDVYSYGM 399
+ + KI DFGL K E + ++ D R + + APE + ++ SDV+S+G+
Sbjct: 160 ESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIA--SDVWSFGV 217
Query: 400 MIHEMVIGRKNADVKVSCSSEYFPNAIY 427
+HE++ C S+ P A++
Sbjct: 218 TLHELL---------TYCDSDSSPMALF 236
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 209 DKLGQGGYADVYKGT-LPDGRLVAVKVMKNLKDN--GEEFINEVASISRTSHVNIVPFLG 265
+K+GQG VY + G+ VA++ M NL+ E INE+ + + NIV +L
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLD 85
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ E++ GSL + + G+ R Q LE+LH
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ-------ALEFLHSN-- 136
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
+++H +IK NI L D K++DFG Q ++S S + GT ++APEV R
Sbjct: 137 -QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM--VGTPYWMAPEVVTRKA 193
Query: 386 GGVSHKSDVYSYGMMIHEMVIG 407
G K D++S G+M EM+ G
Sbjct: 194 YG--PKVDIWSLGIMAIEMIEG 213
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 31/214 (14%)
Query: 206 SFSDKLGQGGYADVYKG--TLPDGRLVAVKVMKNLK-----DNGEEFINEVASISRTSHV 258
S +G G + +V G LP + ++V + K LK +F+ E + + + H
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIA---VGIAR 315
NI+ G + K ++ E+M NGSLD ++ H++ TV Q+ GIA
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--------FTVIQLVGMLRGIAS 158
Query: 316 GLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRG---T 372
G++YL ++ VH D+ NI ++ + K+SDFGL + E + TRG
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE--AAYTTRGGKIP 213
Query: 373 AGYIAPEVFC-RHFGGVSHKSDVYSYGMMIHEMV 405
+ +PE R F + SDV+SYG+++ E++
Sbjct: 214 IRWTSPEAIAYRKF---TSASDVWSYGIVLWEVM 244
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 11/207 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
+V R T ++LG G + +V+ G VAVK +K + + F+ E + + H
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 74
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V ++ +I E+M NGSL ++ S K T+ + +A IA G+
Sbjct: 75 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTI--NKLLDMAAQIAEGMA 129
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
++ +H D++ NI + + KI+DFGLA+ E E + + + + AP
Sbjct: 130 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAP 185
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMV 405
E ++G + KSDV+S+G+++ E+V
Sbjct: 186 EAI--NYGTFTIKSDVWSFGILLTEIV 210
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 11/207 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
+V R T ++LG G + +V+ G VAVK +K + + F+ E + + H
Sbjct: 14 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 73
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V ++ +I E+M NGSL ++ S K T+ + +A IA G+
Sbjct: 74 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTI--NKLLDMAAQIAEGMA 128
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
++ +H D++ NI + + KI+DFGLA+ E E + + + + AP
Sbjct: 129 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAP 184
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMV 405
E ++G + KSDV+S+G+++ E+V
Sbjct: 185 EAI--NYGTFTIKSDVWSFGILLTEIV 209
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 106/219 (48%), Gaps = 25/219 (11%)
Query: 195 FSYSDVRRMTKSFSDKLGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDNG-----EEFIN 247
F +++R++ LG G + V+KG +P+G + + V +K ++D + +
Sbjct: 28 FKETELRKLKV-----LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTD 82
Query: 248 EVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTL-EWRTV 306
+ +I H +IV LG C L+ +++P GSL ++ H + G + L W
Sbjct: 83 HMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW--- 138
Query: 307 YQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISM 366
V IA+G+ YL +VH ++ N+ L +++DFG+A + +
Sbjct: 139 ---GVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLY 192
Query: 367 LDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
+ + ++A E HFG +H+SDV+SYG+ + E++
Sbjct: 193 SEAKTPIKWMALESI--HFGKYTHQSDVWSYGVTVWELM 229
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 19/204 (9%)
Query: 211 LGQGGYADVYKGTL--PDGR--LVAVKVMKN--LKDNGEEFINEVASISRTSHVNIVPFL 264
+G G + +V +G L P + VA+K +K + EF++E + + + H NI+
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
G ++ EFM NG+LD ++ ++G+ T+ + + GIA G+ YL
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFL---RLNDGQFTV--IQLVGMLRGIASGMRYL---A 133
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKES---FISMLDTRGTAGYIAPEVF 381
+ VH D+ NI ++ + K+SDFGL++ E+ S + S L + + APE
Sbjct: 134 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI 193
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMV 405
F + SD +SYG+++ E++
Sbjct: 194 A--FRKFTSASDAWSYGIVMWEVM 215
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 11/207 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
+V R T ++LG G + +V+ G VAVK +K + + F+ E + + H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V ++ +I E+M NGSL ++ S K T+ + +A IA G+
Sbjct: 69 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTIN--KLLDMAAQIAEGMA 123
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
++ +H D++ NI + + KI+DFGLA+ E E + + + + AP
Sbjct: 124 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAP 179
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMV 405
E ++G + KSDV+S+G+++ E+V
Sbjct: 180 EAI--NYGTFTIKSDVWSFGILLTEIV 204
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 106/219 (48%), Gaps = 25/219 (11%)
Query: 195 FSYSDVRRMTKSFSDKLGQGGYADVYKGT-LPDGRLVAVKV-MKNLKDNG-----EEFIN 247
F +++R++ LG G + V+KG +P+G + + V +K ++D + +
Sbjct: 10 FKETELRKLKV-----LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTD 64
Query: 248 EVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTL-EWRTV 306
+ +I H +IV LG C L+ +++P GSL ++ H + G + L W
Sbjct: 65 HMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW--- 120
Query: 307 YQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISM 366
V IA+G+ YL +VH ++ N+ L +++DFG+A + +
Sbjct: 121 ---GVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLY 174
Query: 367 LDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
+ + ++A E HFG +H+SDV+SYG+ + E++
Sbjct: 175 SEAKTPIKWMALESI--HFGKYTHQSDVWSYGVTVWELM 211
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 108/226 (47%), Gaps = 24/226 (10%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYK---GTLPD--GRLVAVKVMKN-LKDN 241
GS P +F ++ F +LG+G + V L D G +VAVK +++ +++
Sbjct: 1 GSRDPTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH 55
Query: 242 GEEFINEVASISRTSHVNIVPFLGFCYEKKKR--ALIYEFMPNGSLDQYIYDHESSNGKR 299
+F E+ + H NIV + G CY +R LI E++P GSL Y+ H K
Sbjct: 56 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-----KE 110
Query: 300 TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT-E 358
++ + Q I +G+EYL R +H ++ NI ++ + KI DFGL K +
Sbjct: 111 RIDHIKLLQYTSQICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQ 167
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEM 404
KE + + APE V+ SDV+S+G++++E+
Sbjct: 168 DKEYYKVKEPGESPIFWYAPESLTESKFSVA--SDVWSFGVVLYEL 211
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 134/301 (44%), Gaps = 40/301 (13%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPD------GRLVAVKVMKNLKDNGE--EFINEVA 250
+V R + +LGQG + VY+G D VAVK + E EF+NE +
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 251 SISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIY----DHESSNGKRTLEWRTV 306
+ + ++V LG + + ++ E M +G L Y+ + E++ G+ + +
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 307 YQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISM 366
Q+A IA G+ YL+ + VH D+ N + DF KI DFG+ + + +
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX---- 185
Query: 367 LDTRGTAG-----YIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
+G G ++APE G + SD++S+G+++ E+ S + +
Sbjct: 186 -XRKGGKGLLPVRWMAPESL--KDGVFTTSSDMWSFGVVLWEI----------TSLAEQP 232
Query: 422 FPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGS 481
+ +Q+ F +DG ++ +++ + C Q +P RP+ ++V +L+
Sbjct: 233 YQGLSNEQV---LKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
Query: 482 I 482
+
Sbjct: 290 L 290
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 135/301 (44%), Gaps = 40/301 (13%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPD------GRLVAVKVMKNLKDNGE--EFINEVA 250
+V R + +LGQG + VY+G D VAVK + E EF+NE +
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 251 SISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIY----DHESSNGKRTLEWRTV 306
+ + ++V LG + + ++ E M +G L Y+ + E++ G+ + +
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 307 YQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISM 366
Q+A IA G+ YL+ + VH D+ N + DF KI DFG+ + + + +
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY--- 186
Query: 367 LDTRGTAG-----YIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
+G G ++APE G + SD++S+G+++ E+ S + +
Sbjct: 187 --RKGGKGLLPVRWMAPESLKD--GVFTTSSDMWSFGVVLWEI----------TSLAEQP 232
Query: 422 FPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGS 481
+ +Q+ F +DG ++ +++ + C Q +P RP+ ++V +L+
Sbjct: 233 YQGLSNEQV---LKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
Query: 482 I 482
+
Sbjct: 290 L 290
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 11/207 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
+V R T ++LG G + +V+ G VAVK +K + + F+ E + + H
Sbjct: 19 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 78
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V ++ +I E+M NGSL ++ S K T+ + +A IA G+
Sbjct: 79 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTI--NKLLDMAAQIAEGMA 133
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
++ +H D++ NI + + KI+DFGLA+ E E + + + + AP
Sbjct: 134 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAP 189
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMV 405
E ++G + KSDV+S+G+++ E+V
Sbjct: 190 EAI--NYGTFTIKSDVWSFGILLTEIV 214
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 142/323 (43%), Gaps = 50/323 (15%)
Query: 187 YGSLAPKRFSYSDV--------RRMTKSFSDKLGQGGYADVYKGTL-------PDGRLVA 231
Y S+ P+ FS +DV R + S +LGQG + VY+G P+ R VA
Sbjct: 23 YASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VA 81
Query: 232 VKVMKNLKDNGE--EFINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYI 289
+K + E EF+NE + + + ++V LG + + +I E M G L Y+
Sbjct: 82 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 141
Query: 290 Y----DHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFC 345
+ E++ + Q+A IA G+ YL+ + VH D+ N + EDF
Sbjct: 142 RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFT 198
Query: 346 PKISDFGLAKQTEKKESFISMLDTRGTAG-----YIAPEVFCRHFGGVSHKSDVYSYGMM 400
KI DFG+ + + + + +G G +++PE G + SDV+S+G++
Sbjct: 199 VKIGDFGMTRDIYETDYY-----RKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVV 251
Query: 401 IHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWC 460
+ E+ + + + + +Q+ F ++G + ++ + + C
Sbjct: 252 LWEI----------ATLAEQPYQGLSNEQV---LRFVMEGGLLDKPDNCPDMLFELMRMC 298
Query: 461 IQTHPPDRPSMTKVVEMLEGSIE 483
Q +P RPS +++ ++ +E
Sbjct: 299 WQYNPKMRPSFLEIISSIKEEME 321
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 139/311 (44%), Gaps = 47/311 (15%)
Query: 195 FSYSDVRRMTKSFSDKL-----------GQGGYADVYKGTL--PDGR--LVAVKVMKN-- 237
F++ D + + F+ ++ G G + +V G L P R VA+K +K
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 238 LKDNGEEFINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNG 297
+F++E + + + H NI+ G + K +I E+M NGSLD ++ ++G
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL---RKNDG 126
Query: 298 KRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT 357
+ T+ + + GI G++YL ++ VH D+ NI ++ + K+SDFG+++
Sbjct: 127 RFTV--IQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVL 181
Query: 358 EKKESFISMLDTRG---TAGYIAPEVFC-RHFGGVSHKSDVYSYGMMIHEMVIGRKNADV 413
E + TRG + APE R F + SDV+SYG+++ E++ +
Sbjct: 182 EDDPE--AAYTTRGGKIPIRWTAPEAIAYRKF---TSASDVWSYGIVMWEVMSYGERPYW 236
Query: 414 KVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTK 473
+S + K IE Y + +A +++ W Q DRP +
Sbjct: 237 DMSNQD------VIKAIEEGYRLP-----PPMDCPIALHQLMLDCW--QKERSDRPKFGQ 283
Query: 474 VVEMLEGSIEN 484
+V ML+ I N
Sbjct: 284 IVNMLDKLIRN 294
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 135/301 (44%), Gaps = 40/301 (13%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPD------GRLVAVKVMKNLKDNGE--EFINEVA 250
+V R + +LGQG + VY+G D VAVK + E EF+NE +
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 71
Query: 251 SISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIY----DHESSNGKRTLEWRTV 306
+ + ++V LG + + ++ E M +G L Y+ + E++ G+ + +
Sbjct: 72 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 131
Query: 307 YQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISM 366
Q+A IA G+ YL+ + VH D+ N + DF KI DFG+ + + + +
Sbjct: 132 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY--- 185
Query: 367 LDTRGTAG-----YIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
+G G ++APE G + SD++S+G+++ E+ S + +
Sbjct: 186 --RKGGKGLLPVRWMAPESL--KDGVFTTSSDMWSFGVVLWEI----------TSLAEQP 231
Query: 422 FPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGS 481
+ +Q+ F +DG ++ +++ + C Q +P RP+ ++V +L+
Sbjct: 232 YQGLSNEQV---LKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 288
Query: 482 I 482
+
Sbjct: 289 L 289
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 134/301 (44%), Gaps = 40/301 (13%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPD------GRLVAVKVMKNLKDNGE--EFINEVA 250
+V R + +LGQG + VY+G D VAVK + E EF+NE +
Sbjct: 10 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 69
Query: 251 SISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIY----DHESSNGKRTLEWRTV 306
+ + ++V LG + + ++ E M +G L Y+ + E++ G+ + +
Sbjct: 70 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 129
Query: 307 YQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISM 366
Q+A IA G+ YL+ + VH D+ N + DF KI DFG+ + + +
Sbjct: 130 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX---- 182
Query: 367 LDTRGTAG-----YIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
+G G ++APE G + SD++S+G+++ E+ S + +
Sbjct: 183 -XRKGGKGLLPVRWMAPESL--KDGVFTTSSDMWSFGVVLWEI----------TSLAEQP 229
Query: 422 FPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGS 481
+ +Q+ F +DG ++ +++ + C Q +P RP+ ++V +L+
Sbjct: 230 YQGLSNEQV---LKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 286
Query: 482 I 482
+
Sbjct: 287 L 287
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 132/276 (47%), Gaps = 45/276 (16%)
Query: 211 LGQGGYADVYKGTLPD------GRLVAVKVMKNLKDNGEEFINEVASISRT-SHVNIVPF 263
LG+GG+A ++ + D G++V ++ LK + E ++ SI R+ +H ++V F
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLL--LKPHQREKMSMEISIHRSLAHQHVVGF 86
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRG 323
GF + ++ E SL + H+ E R + I G +YLHR
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLR---QIVLGCQYLHRN 140
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT----EKKESFISMLDTRGTAGYIAPE 379
R++H D+K N+ L+ED KI DFGLA + E+K++ GT YIAPE
Sbjct: 141 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC------GTPNYIAPE 191
Query: 380 VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLD 439
V + G S + DV+S G +++ +++G+ + SC E Y +I+ ++ +
Sbjct: 192 VLSKK--GHSFEVDVWSIGCIMYTLLVGK--PPFETSCLKE-----TYLRIKKN-EYSIP 241
Query: 440 GVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVV 475
+ + +KM +QT P RP++ +++
Sbjct: 242 KHINPVAASLIQKM-------LQTDPTARPTINELL 270
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 127/290 (43%), Gaps = 48/290 (16%)
Query: 211 LGQGGYADVYKG--TLPDGR--LVAVKVMK--NLKDNGEEFINEVASISRTSHVNIVPFL 264
+G G + +V G LP R VA+K +K + +F+ E + + + H NI+
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
G + K ++ E+M NGSLD ++ + ++G+ T+ + + GI+ G++YL
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFL---KKNDGQFTV--IQLVGMLRGISAGMKYL---S 141
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRG---TAGYIAPEVF 381
++ VH D+ NI ++ + K+SDFGL++ E + TRG + APE
Sbjct: 142 DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIPIRWTAPEAI 199
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMV-IGRK------NADVKVSCSSEYFPNAIYKQIETEY 434
F + SDV+SYG+++ E+V G + N DV + Y + Y
Sbjct: 200 A--FRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMDCPAALY 257
Query: 435 DFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSIEN 484
LD C Q RP ++V ML+ I N
Sbjct: 258 QLMLD--------------------CWQKERNSRPKFDEIVNMLDKLIRN 287
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 11/207 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
+V R T ++LG G + +V+ G VAVK +K + + F+ E + + H
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 63
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V ++ +I E+M NGSL ++ S K T+ + +A IA G+
Sbjct: 64 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTIN--KLLDMAAQIAEGMA 118
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
++ +H D++ NI + + KI+DFGLA+ E E + + + + AP
Sbjct: 119 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAP 174
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMV 405
E ++G + KSDV+S+G+++ E+V
Sbjct: 175 EAI--NYGTFTIKSDVWSFGILLTEIV 199
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 31/214 (14%)
Query: 206 SFSDKLGQGGYADVYKG--TLPDGRLVAVKVMKNLK-----DNGEEFINEVASISRTSHV 258
S +G G + +V G LP + ++V + K LK +F+ E + + + H
Sbjct: 19 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIA---VGIAR 315
NI+ G + K ++ E M NGSLD ++ H++ TV Q+ GIA
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ--------FTVIQLVGMLRGIAS 129
Query: 316 GLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRG---T 372
G++YL ++ VH D+ NI ++ + K+SDFGL++ E + TRG
Sbjct: 130 GMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIP 184
Query: 373 AGYIAPEVFC-RHFGGVSHKSDVYSYGMMIHEMV 405
+ +PE R F + SDV+SYG+++ E++
Sbjct: 185 IRWTSPEAIAYRKF---TSASDVWSYGIVLWEVM 215
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 140/300 (46%), Gaps = 46/300 (15%)
Query: 211 LGQGGYADVYKGTLPD------GRLVAVKVMKNLKDNGEEFINEVASISRT-SHVNIVPF 263
LG+GG+A ++ + D G++V ++ LK + E ++ SI R+ +H ++V F
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLL--LKPHQREKMSMEISIHRSLAHQHVVGF 80
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRG 323
GF + ++ E SL + H+ E R + I G +YLHR
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLR---QIVLGCQYLHRN 134
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCR 383
R++H D+K N+ L+ED KI DFGLA + E +L GT YIAPEV +
Sbjct: 135 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--GTPNYIAPEVLSK 189
Query: 384 HFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVT 443
G S + DV+S G +++ +++G+ + SC E Y +I+ ++ + +
Sbjct: 190 K--GHSFEVDVWSIGCIMYTLLVGK--PPFETSCLKE-----TYLRIKKN-EYSIPKHIN 239
Query: 444 EEEKEMAKKMILVSLWCIQTHPPDRPSMTKVV--EMLEGS-------IENLQIPPKPSLS 494
+ +KM +QT P RP++ +++ E I L IPP+ S++
Sbjct: 240 PVAASLIQKM-------LQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIA 292
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 130/272 (47%), Gaps = 37/272 (13%)
Query: 211 LGQGGYADVYKGTLPD------GRLVAVKVMKNLKDNGEEFINEVASISRT-SHVNIVPF 263
LG+GG+A ++ + D G++V ++ LK + E ++ SI R+ +H ++V F
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLL--LKPHQREKMSMEISIHRSLAHQHVVGF 104
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRG 323
GF + ++ E SL + H+ E R + I G +YLHR
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLR---QIVLGCQYLHRN 158
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCR 383
R++H D+K N+ L+ED KI DFGLA + E +L GT YIAPEV +
Sbjct: 159 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--GTPNYIAPEVLSK 213
Query: 384 HFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVT 443
G S + DV+S G +++ +++G+ + SC E Y +I+ ++ + +
Sbjct: 214 K--GHSFEVDVWSIGCIMYTLLVGK--PPFETSCLKE-----TYLRIKKN-EYSIPKHIN 263
Query: 444 EEEKEMAKKMILVSLWCIQTHPPDRPSMTKVV 475
+ +KM +QT P RP++ +++
Sbjct: 264 PVAASLIQKM-------LQTDPTARPTINELL 288
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 132/276 (47%), Gaps = 45/276 (16%)
Query: 211 LGQGGYADVYKGTLPD------GRLVAVKVMKNLKDNGEEFINEVASISRT-SHVNIVPF 263
LG+GG+A ++ + D G++V ++ LK + E ++ SI R+ +H ++V F
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLL--LKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRG 323
GF + ++ E SL + H+ E R + I G +YLHR
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLR---QIVLGCQYLHRN 136
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT----EKKESFISMLDTRGTAGYIAPE 379
R++H D+K N+ L+ED KI DFGLA + E+K++ GT YIAPE
Sbjct: 137 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC------GTPNYIAPE 187
Query: 380 VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLD 439
V + G S + DV+S G +++ +++G+ + SC E Y +I+ ++ +
Sbjct: 188 VLSKK--GHSFEVDVWSIGCIMYTLLVGK--PPFETSCLKE-----TYLRIKKN-EYSIP 237
Query: 440 GVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVV 475
+ + +KM +QT P RP++ +++
Sbjct: 238 KHINPVAASLIQKM-------LQTDPTARPTINELL 266
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 130/272 (47%), Gaps = 37/272 (13%)
Query: 211 LGQGGYADVYKGTLPD------GRLVAVKVMKNLKDNGEEFINEVASISRT-SHVNIVPF 263
LG+GG+A ++ + D G++V ++ LK + E ++ SI R+ +H ++V F
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLL--LKPHQREKMSMEISIHRSLAHQHVVGF 106
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRG 323
GF + ++ E SL + H+ E R + I G +YLHR
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLR---QIVLGCQYLHRN 160
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCR 383
R++H D+K N+ L+ED KI DFGLA + E +L GT YIAPEV +
Sbjct: 161 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--GTPNYIAPEVLSK 215
Query: 384 HFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVT 443
G S + DV+S G +++ +++G+ + SC E Y +I+ ++ + +
Sbjct: 216 K--GHSFEVDVWSIGCIMYTLLVGK--PPFETSCLKE-----TYLRIKKN-EYSIPKHIN 265
Query: 444 EEEKEMAKKMILVSLWCIQTHPPDRPSMTKVV 475
+ +KM +QT P RP++ +++
Sbjct: 266 PVAASLIQKM-------LQTDPTARPTINELL 290
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 132/276 (47%), Gaps = 45/276 (16%)
Query: 211 LGQGGYADVYKGTLPD------GRLVAVKVMKNLKDNGEEFINEVASISRT-SHVNIVPF 263
LG+GG+A ++ + D G++V ++ LK + E ++ SI R+ +H ++V F
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLL--LKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRG 323
GF + ++ E SL + H+ E R + I G +YLHR
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLR---QIVLGCQYLHRN 136
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT----EKKESFISMLDTRGTAGYIAPE 379
R++H D+K N+ L+ED KI DFGLA + E+K++ GT YIAPE
Sbjct: 137 ---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC------GTPNYIAPE 187
Query: 380 VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLD 439
V + G S + DV+S G +++ +++G+ + SC E Y +I+ ++ +
Sbjct: 188 VLSKK--GHSFEVDVWSIGCIMYTLLVGK--PPFETSCLKE-----TYLRIKKN-EYSIP 237
Query: 440 GVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVV 475
+ + +KM +QT P RP++ +++
Sbjct: 238 KHINPVAASLIQKM-------LQTDPTARPTINELL 266
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 31/214 (14%)
Query: 206 SFSDKLGQGGYADVYKG--TLPDGRLVAVKVMKNLK-----DNGEEFINEVASISRTSHV 258
S +G G + +V G LP + ++V + K LK +F+ E + + + H
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIA---VGIAR 315
NI+ G + K ++ E M NGSLD ++ H++ TV Q+ GIA
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ--------FTVIQLVGMLRGIAS 158
Query: 316 GLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRG---T 372
G++YL ++ VH D+ NI ++ + K+SDFGL++ E + TRG
Sbjct: 159 GMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIP 213
Query: 373 AGYIAPEVFC-RHFGGVSHKSDVYSYGMMIHEMV 405
+ +PE R F + SDV+SYG+++ E++
Sbjct: 214 IRWTSPEAIAYRKF---TSASDVWSYGIVLWEVM 244
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 134/301 (44%), Gaps = 40/301 (13%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPD------GRLVAVKVMKNLKDNGE--EFINEVA 250
+V R + +LGQG + VY+G D VAVK + E EF+NE +
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 251 SISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIY----DHESSNGKRTLEWRTV 306
+ + ++V LG + + ++ E M +G L Y+ + E++ G+ + +
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 307 YQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISM 366
Q+A IA G+ YL+ + VH D+ N + DF KI DFG+ + + +
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX---- 185
Query: 367 LDTRGTAG-----YIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
+G G ++APE G + SD++S+G+++ E+ S + +
Sbjct: 186 -XRKGGKGLLPVRWMAPESL--KDGVFTTSSDMWSFGVVLWEI----------TSLAEQP 232
Query: 422 FPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGS 481
+ +Q+ F +DG ++ +++ + C Q +P RP+ ++V +L+
Sbjct: 233 YQGLSNEQV---LKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 289
Query: 482 I 482
+
Sbjct: 290 L 290
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 130/284 (45%), Gaps = 36/284 (12%)
Query: 211 LGQGGYADVYKGTL--PDGR--LVAVKVMKN--LKDNGEEFINEVASISRTSHVNIVPFL 264
+G G + +V G L P R VA+K +K +F++E + + + H NI+
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
G + K +I E+M NGSLD ++ ++G+ T+ + + GI G++YL
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTV--IQLVGMLRGIGSGMKYLS--- 127
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRG---TAGYIAPEVF 381
++ VH D+ NI ++ + K+SDFG+++ E + TRG + APE
Sbjct: 128 DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE--AAYTTRGGKIPIRWTAPEAI 185
Query: 382 C-RHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDG 440
R F + SDV+SYG+++ E++ + +S + K IE Y
Sbjct: 186 AYRKF---TSASDVWSYGIVMWEVMSYGERPYWDMSNQD------VIKAIEEGYRLP--- 233
Query: 441 VVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSIEN 484
+ +A +++ W Q DRP ++V ML+ I N
Sbjct: 234 --PPMDCPIALHQLMLDCW--QKERSDRPKFGQIVNMLDKLIRN 273
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 207 FSDKLGQGGYADVYK---GTLPD--GRLVAVKVMKN-LKDNGEEFINEVASISRTSHVNI 260
F +LG+G + V L D G +VAVK +++ +++ +F E+ + H NI
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104
Query: 261 VPFLGFCYEKKKR--ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
V + G CY +R LI E++P GSL Y+ H K ++ + Q I +G+E
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-----KERIDHIKLLQYTSQICKGME 159
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT-EKKESFISMLDTRGTAGYIA 377
YL R +H D+ NI ++ + KI DFGL K + KE + A
Sbjct: 160 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 216
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEM 404
PE V+ SDV+S+G++++E+
Sbjct: 217 PESLTESKFSVA--SDVWSFGVVLYEL 241
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 207 FSDKLGQGGYADVYK---GTLPD--GRLVAVKVMKN-LKDNGEEFINEVASISRTSHVNI 260
F +LG+G + V L D G +VAVK +++ +++ +F E+ + H NI
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 71
Query: 261 VPFLGFCYEKKKR--ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
V + G CY +R LI E++P GSL Y+ H K ++ + Q I +G+E
Sbjct: 72 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-----KERIDHIKLLQYTSQICKGME 126
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT-EKKESFISMLDTRGTAGYIA 377
YL R +H D+ NI ++ + KI DFGL K + KE + A
Sbjct: 127 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 183
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEM 404
PE V+ SDV+S+G++++E+
Sbjct: 184 PESLTESKFSVA--SDVWSFGVVLYEL 208
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 207 FSDKLGQGGYADVYK---GTLPD--GRLVAVKVMKN-LKDNGEEFINEVASISRTSHVNI 260
F +LG+G + V L D G +VAVK +++ +++ +F E+ + H NI
Sbjct: 19 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 78
Query: 261 VPFLGFCYEKKKR--ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
V + G CY +R LI E++P GSL Y+ H K ++ + Q I +G+E
Sbjct: 79 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-----KERIDHIKLLQYTSQICKGME 133
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT-EKKESFISMLDTRGTAGYIA 377
YL R +H D+ NI ++ + KI DFGL K + KE + A
Sbjct: 134 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 190
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEM 404
PE V+ SDV+S+G++++E+
Sbjct: 191 PESLTESKFSVA--SDVWSFGVVLYEL 215
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLG 265
+F +LG G + V G VA+K++K + +EFI E + SH +V G
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
C +++ +I E+M NG L Y+ + + + + + ++ + +EYL +
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLREM-----RHRFQTQQLLEMCKDVCEAMEYLE---S 138
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
+ +H D+ N +++ K+SDFGL++ E + S + ++ + PEV +
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLM--Y 195
Query: 386 GGVSHKSDVYSYGMMIHEM 404
S KSD++++G+++ E+
Sbjct: 196 SKFSSKSDIWAFGVLMWEI 214
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 207 FSDKLGQGGYADVYK---GTLPD--GRLVAVKVMKN-LKDNGEEFINEVASISRTSHVNI 260
F +LG+G + V L D G +VAVK +++ +++ +F E+ + H NI
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 261 VPFLGFCYEKKKR--ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
V + G CY +R LI E++P GSL Y+ H K ++ + Q I +G+E
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-----KERIDHIKLLQYTSQICKGME 131
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT-EKKESFISMLDTRGTAGYIA 377
YL R +H D+ NI ++ + KI DFGL K + KE + A
Sbjct: 132 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEM 404
PE V+ SDV+S+G++++E+
Sbjct: 189 PESLTESKFSVA--SDVWSFGVVLYEL 213
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 207 FSDKLGQGGYADVYK---GTLPD--GRLVAVKVMKN-LKDNGEEFINEVASISRTSHVNI 260
F +LG+G + V L D G +VAVK +++ +++ +F E+ + H NI
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 72
Query: 261 VPFLGFCYEKKKR--ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
V + G CY +R LI E++P GSL Y+ H K ++ + Q I +G+E
Sbjct: 73 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-----KERIDHIKLLQYTSQICKGME 127
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT-EKKESFISMLDTRGTAGYIA 377
YL R +H D+ NI ++ + KI DFGL K + KE + A
Sbjct: 128 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 184
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEM 404
PE V+ SDV+S+G++++E+
Sbjct: 185 PESLTESKFSVA--SDVWSFGVVLYEL 209
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 207 FSDKLGQGGYADVYK---GTLPD--GRLVAVKVMKN-LKDNGEEFINEVASISRTSHVNI 260
F +LG+G + V L D G +VAVK +++ +++ +F E+ + H NI
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 261 VPFLGFCYEKKKR--ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
V + G CY +R LI E++P GSL Y+ H K ++ + Q I +G+E
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-----KERIDHIKLLQYTSQICKGME 128
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT-EKKESFISMLDTRGTAGYIA 377
YL R +H D+ NI ++ + KI DFGL K + KE + A
Sbjct: 129 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEM 404
PE V+ SDV+S+G++++E+
Sbjct: 186 PESLTESKFSVA--SDVWSFGVVLYEL 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 207 FSDKLGQGGYADVYK---GTLPD--GRLVAVKVMKN-LKDNGEEFINEVASISRTSHVNI 260
F +LG+G + V L D G +VAVK +++ +++ +F E+ + H NI
Sbjct: 18 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 77
Query: 261 VPFLGFCYEKKKR--ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
V + G CY +R LI E++P GSL Y+ H K ++ + Q I +G+E
Sbjct: 78 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-----KERIDHIKLLQYTSQICKGME 132
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT-EKKESFISMLDTRGTAGYIA 377
YL R +H D+ NI ++ + KI DFGL K + KE + A
Sbjct: 133 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 189
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEM 404
PE V+ SDV+S+G++++E+
Sbjct: 190 PESLTESKFSVA--SDVWSFGVVLYEL 214
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 207 FSDKLGQGGYADVYK---GTLPD--GRLVAVKVMKN-LKDNGEEFINEVASISRTSHVNI 260
F +LG+G + V L D G +VAVK +++ +++ +F E+ + H NI
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 261 VPFLGFCYEKKKR--ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
V + G CY +R LI E++P GSL Y+ H K ++ + Q I +G+E
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-----KERIDHIKLLQYTSQICKGME 128
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT-EKKESFISMLDTRGTAGYIA 377
YL R +H D+ NI ++ + KI DFGL K + KE + A
Sbjct: 129 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEM 404
PE V+ SDV+S+G++++E+
Sbjct: 186 PESLTESKFSVA--SDVWSFGVVLYEL 210
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 207 FSDKLGQGGYADVYK---GTLPD--GRLVAVKVMKN-LKDNGEEFINEVASISRTSHVNI 260
F +LG+G + V L D G +VAVK +++ +++ +F E+ + H NI
Sbjct: 20 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 79
Query: 261 VPFLGFCYEKKKR--ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
V + G CY +R LI E++P GSL Y+ H K ++ + Q I +G+E
Sbjct: 80 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-----KERIDHIKLLQYTSQICKGME 134
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT-EKKESFISMLDTRGTAGYIA 377
YL R +H D+ NI ++ + KI DFGL K + KE + A
Sbjct: 135 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 191
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEM 404
PE V+ SDV+S+G++++E+
Sbjct: 192 PESLTESKFSVA--SDVWSFGVVLYEL 216
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 207 FSDKLGQGGYADVYK---GTLPD--GRLVAVKVMKN-LKDNGEEFINEVASISRTSHVNI 260
F +LG+G + V L D G +VAVK +++ +++ +F E+ + H NI
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 80
Query: 261 VPFLGFCYEKKKR--ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
V + G CY +R LI E++P GSL Y+ H K ++ + Q I +G+E
Sbjct: 81 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-----KERIDHIKLLQYTSQICKGME 135
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT-EKKESFISMLDTRGTAGYIA 377
YL R +H D+ NI ++ + KI DFGL K + KE + A
Sbjct: 136 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 192
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEM 404
PE V+ SDV+S+G++++E+
Sbjct: 193 PESLTESKFSVA--SDVWSFGVVLYEL 217
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 207 FSDKLGQGGYADVYK---GTLPD--GRLVAVKVMKN-LKDNGEEFINEVASISRTSHVNI 260
F +LG+G + V L D G +VAVK +++ +++ +F E+ + H NI
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 261 VPFLGFCYEKKKR--ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
V + G CY +R LI E++P GSL Y+ H K ++ + Q I +G+E
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-----KERIDHIKLLQYTSQICKGME 146
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT-EKKESFISMLDTRGTAGYIA 377
YL R +H D+ NI ++ + KI DFGL K + KE + A
Sbjct: 147 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEM 404
PE V+ SDV+S+G++++E+
Sbjct: 204 PESLTESKFSVA--SDVWSFGVVLYEL 228
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 207 FSDKLGQGGYADVYK---GTLPD--GRLVAVKVMKN-LKDNGEEFINEVASISRTSHVNI 260
F +LG+G + V L D G +VAVK +++ +++ +F E+ + H NI
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 261 VPFLGFCYEKKKR--ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
V + G CY +R LI E++P GSL Y+ H K ++ + Q I +G+E
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-----KERIDHIKLLQYTSQICKGME 146
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT-EKKESFISMLDTRGTAGYIA 377
YL R +H D+ NI ++ + KI DFGL K + KE + A
Sbjct: 147 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEM 404
PE V+ SDV+S+G++++E+
Sbjct: 204 PESLTESKFSVA--SDVWSFGVVLYEL 228
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLG 265
+F +LG G + V G VA+K++K + +EFI E + SH +V G
Sbjct: 11 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 70
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
C +++ +I E+M NG L Y+ + + + + + ++ + +EYL +
Sbjct: 71 VCTKQRPIFIITEYMANGCLLNYLREM-----RHRFQTQQLLEMCKDVCEAMEYLE---S 122
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
+ +H D+ N +++ K+SDFGL++ E + S + ++ + PEV +
Sbjct: 123 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLM--Y 179
Query: 386 GGVSHKSDVYSYGMMIHEM 404
S KSD++++G+++ E+
Sbjct: 180 SKFSSKSDIWAFGVLMWEI 198
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 134/301 (44%), Gaps = 40/301 (13%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPD------GRLVAVKVMKNLKDNGE--EFINEVA 250
+V R + +LGQG + VY+G D VAVK + E EF+NE +
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 251 SISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIY----DHESSNGKRTLEWRTV 306
+ + ++V LG + + ++ E M +G L Y+ + E++ G+ + +
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 307 YQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISM 366
Q+A IA G+ YL+ + VH D+ N + DF KI DFG+ + + +
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYY--- 186
Query: 367 LDTRGTAG-----YIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
+G G ++APE G + SD++S+G+++ E+ S + +
Sbjct: 187 --RKGGKGLLPVRWMAPESLKD--GVFTTSSDMWSFGVVLWEI----------TSLAEQP 232
Query: 422 FPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGS 481
+ +Q+ F +DG ++ +++ + C Q +P RP+ ++V +L+
Sbjct: 233 YQGLSNEQV---LKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
Query: 482 I 482
+
Sbjct: 290 L 290
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 130/284 (45%), Gaps = 36/284 (12%)
Query: 211 LGQGGYADVYKGTL--PDGR--LVAVKVMKN--LKDNGEEFINEVASISRTSHVNIVPFL 264
+G G + +V G L P R VA+K +K +F++E + + + H NI+
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
G + K +I E+M NGSLD ++ ++G+ T+ + + GI G++YL
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTV--IQLVGMLRGIGSGMKYLS--- 133
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRG---TAGYIAPEVF 381
++ VH D+ NI ++ + K+SDFG+++ E + TRG + APE
Sbjct: 134 DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE--AAYTTRGGKIPIRWTAPEAI 191
Query: 382 C-RHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDG 440
R F + SDV+SYG+++ E++ + +S + K IE Y
Sbjct: 192 AYRKF---TSASDVWSYGIVMWEVMSYGERPYWDMSNQD------VIKAIEEGYRLP--- 239
Query: 441 VVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSIEN 484
+ +A +++ W Q DRP ++V ML+ I N
Sbjct: 240 --PPMDCPIALHQLMLDCW--QKERSDRPKFGQIVNMLDKLIRN 279
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
+V R T ++LG G + +V+ G VAVK +K + + F+ E + + H
Sbjct: 18 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 77
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V ++ +I E+M NGSL ++ S K T+ + +A IA G+
Sbjct: 78 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTI--NKLLDMAAQIAEGMA 132
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
++ +H D++ NI + + KI+DFGLA+ E E + + + AP
Sbjct: 133 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAP 188
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMV 405
E ++G + KSDV+S+G+++ E+V
Sbjct: 189 EAI--NYGTFTIKSDVWSFGILLTEIV 213
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
+V R T ++LG G + +V+ G VAVK +K + + F+ E + + H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V ++ +I E+M NGSL ++ S K T+ + +A IA G+
Sbjct: 69 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTI--NKLLDMAAQIAEGMA 123
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
++ +H D++ NI + + KI+DFGLA+ E E + + + AP
Sbjct: 124 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAP 179
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMV 405
E ++G + KSDV+S+G+++ E+V
Sbjct: 180 EAI--NYGTFTIKSDVWSFGILLTEIV 204
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
+V R T ++LG G + +V+ G VAVK +K + + F+ E + + H
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 74
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V ++ +I E+M NGSL ++ S K T+ + +A IA G+
Sbjct: 75 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTI--NKLLDMAAQIAEGMA 129
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
++ +H D++ NI + + KI+DFGLA+ E E + + + AP
Sbjct: 130 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAP 185
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMV 405
E ++G + KSDV+S+G+++ E+V
Sbjct: 186 EAI--NYGTFTIKSDVWSFGILLTEIV 210
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLG 265
+F +LG G + V G VA+K++K + +EFI E + SH +V G
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 66
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
C +++ +I E+M NG L Y+ + + + + + ++ + +EYL +
Sbjct: 67 VCTKQRPIFIITEYMANGCLLNYLREM-----RHRFQTQQLLEMCKDVCEAMEYLE---S 118
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
+ +H D+ N +++ K+SDFGL++ E + S + ++ + PEV +
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLM--Y 175
Query: 386 GGVSHKSDVYSYGMMIHEM 404
S KSD++++G+++ E+
Sbjct: 176 SKFSSKSDIWAFGVLMWEI 194
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
+V R T ++LG G + +V+ G VAVK +K + + F+ E + + H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V ++ +I E+M NGSL ++ S K T+ + +A IA G+
Sbjct: 69 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTIN--KLLDMAAQIAEGMA 123
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
++ +H D++ NI + + KI+DFGLA+ E E + + + AP
Sbjct: 124 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAP 179
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMV 405
E ++G + KSDV+S+G+++ E+V
Sbjct: 180 EAI--NYGTFTIKSDVWSFGILLTEIV 204
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
+V R T ++LG G + +V+ G VAVK +K + + F+ E + + H
Sbjct: 10 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 69
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V ++ +I E+M NGSL ++ S K T+ + +A IA G+
Sbjct: 70 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTI--NKLLDMAAQIAEGMA 124
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
++ +H D++ NI + + KI+DFGLA+ E E + + + AP
Sbjct: 125 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAP 180
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMV 405
E ++G + KSDV+S+G+++ E+V
Sbjct: 181 EAI--NYGTFTIKSDVWSFGILLTEIV 205
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 31/214 (14%)
Query: 206 SFSDKLGQGGYADVYKG--TLPDGRLVAVKVMKNLK-----DNGEEFINEVASISRTSHV 258
S +G G + +V G LP + ++V + K LK +F+ E + + + H
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIA---VGIAR 315
NI+ G + K ++ E M NGSLD ++ H++ TV Q+ GIA
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ--------FTVIQLVGMLRGIAS 158
Query: 316 GLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRG---T 372
G++YL ++ VH D+ NI ++ + K+SDFGL++ E + TRG
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE--AAYTTRGGKIP 213
Query: 373 AGYIAPEVFC-RHFGGVSHKSDVYSYGMMIHEMV 405
+ +PE R F + SDV+SYG+++ E++
Sbjct: 214 IRWTSPEAIAYRKF---TSASDVWSYGIVLWEVM 244
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
+V R T ++LG G + +V+ G VAVK +K + + F+ E + + H
Sbjct: 11 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 70
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V ++ +I E+M NGSL ++ S K T+ + +A IA G+
Sbjct: 71 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTI--NKLLDMAAQIAEGMA 125
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
++ +H D++ NI + + KI+DFGLA+ E E + + + AP
Sbjct: 126 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAP 181
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMV 405
E ++G + KSDV+S+G+++ E+V
Sbjct: 182 EAI--NYGTFTIKSDVWSFGILLTEIV 206
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLG 265
+F +LG G + V G VA+K++K + +EFI E + SH +V G
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
C +++ +I E+M NG L Y+ + + + + + ++ + +EYL +
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLREM-----RHRFQTQQLLEMCKDVCEAMEYLE---S 123
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
+ +H D+ N +++ K+SDFGL++ E + S + ++ + PEV +
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLM--Y 180
Query: 386 GGVSHKSDVYSYGMMIHEM 404
S KSD++++G+++ E+
Sbjct: 181 SKFSSKSDIWAFGVLMWEI 199
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
+V R T ++LG G + +V+ G VAVK +K + + F+ E + + H
Sbjct: 17 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 76
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V ++ +I E+M NGSL ++ S K T+ + +A IA G+
Sbjct: 77 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTI--NKLLDMAAQIAEGMA 131
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
++ +H D++ NI + + KI+DFGLA+ E E + + + AP
Sbjct: 132 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAP 187
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMV 405
E ++G + KSDV+S+G+++ E+V
Sbjct: 188 EAI--NYGTFTIKSDVWSFGILLTEIV 212
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLG 265
+F +LG G + V G VA+K++K + +EFI E + SH +V G
Sbjct: 18 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 77
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
C +++ +I E+M NG L Y+ + + + + + ++ + +EYL +
Sbjct: 78 VCTKQRPIFIITEYMANGCLLNYLREM-----RHRFQTQQLLEMCKDVCEAMEYLE---S 129
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
+ +H D+ N +++ K+SDFGL++ E + S + ++ + PEV +
Sbjct: 130 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLM--Y 186
Query: 386 GGVSHKSDVYSYGMMIHEM 404
S KSD++++G+++ E+
Sbjct: 187 SKFSSKSDIWAFGVLMWEI 205
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 111/254 (43%), Gaps = 49/254 (19%)
Query: 210 KLGQGGYADVYKGTLPDGRL-VAVKVMK--------------NLKDNGEEFINEVASISR 254
KLG G Y +V +G A+KV+K N++ EE NE++ +
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 255 TSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIA 314
H NI+ +KK L+ EF G L + I + + + I I
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN------RHKFDECDAANIMKQIL 156
Query: 315 RGLEYLHRGCNIRIVHLDIKPHNIRLDED---FCPKISDFGLAKQTEKKESFIS----ML 367
G+ YLH+ IVH DIKP NI L+ KI DFGL+ SF S +
Sbjct: 157 SGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLS-------SFFSKDYKLR 206
Query: 368 DTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVI------GRKNADV--KVSCSS 419
D GTA YIAPEV + + + K DV+S G++++ ++ G+ + D+ KV
Sbjct: 207 DRLGTAYYIAPEVLKKKY---NEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGK 263
Query: 420 EYFPNAIYKQIETE 433
YF +K I E
Sbjct: 264 YYFDFNDWKNISDE 277
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 200 VRRMTKSFSDKLGQGGYADVYKG-TLPDGRLVAVKV--MKNLKDNGEEFINEVASISRTS 256
+ R + +G G A V P VA+K ++ + + +E + E+ ++S+
Sbjct: 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 71
Query: 257 HVNIVPFLGFCYEKKKRALIYEFMPNGS-LDQYIYDHESSNGKR---TLEWRTVYQIAVG 312
H NIV + K + L+ + + GS LD I H + G+ L+ T+ I
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLD--IIKHIVAKGEHKSGVLDESTIATILRE 129
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAK---------QTEKKESF 363
+ GLEYLH+ I H D+K NI L ED +I+DFG++ + + +++F
Sbjct: 130 VLEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 186
Query: 364 ISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFP 423
+ GT ++APEV G K+D++S+G+ E+ G + +Y P
Sbjct: 187 V------GTPCWMAPEVM-EQVRGYDFKADIWSFGITAIELATG-------AAPYHKYPP 232
Query: 424 NAIYKQIETEYDFQLDGVVTEEEKEMAKK-----MILVSLWCIQTHPPDRPSMTKVV 475
+ L+ V ++KEM KK ++SL C+Q P RP+ +++
Sbjct: 233 MKVLMLTLQNDPPSLETGV--QDKEMLKKYGKSFRKMISL-CLQKDPEKRPTAAELL 286
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 97/199 (48%), Gaps = 11/199 (5%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLG 265
+F +LG G + V G VA+K++K + +EFI E + SH +V G
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
C +++ +I E+M NG L Y+ + + + + + ++ + +EYL +
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLREM-----RHRFQTQQLLEMCKDVCEAMEYLE---S 138
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
+ +H D+ N +++ K+SDFGL++ E S + ++ + PEV +
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEE-TSSVGSKFPVRWSPPEVLM--Y 195
Query: 386 GGVSHKSDVYSYGMMIHEM 404
S KSD++++G+++ E+
Sbjct: 196 SKFSSKSDIWAFGVLMWEI 214
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 200 VRRMTKSFSDKLGQGGYADVYKG-TLPDGRLVAVKV--MKNLKDNGEEFINEVASISRTS 256
+ R + +G G A V P VA+K ++ + + +E + E+ ++S+
Sbjct: 7 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 66
Query: 257 HVNIVPFLGFCYEKKKRALIYEFMPNGS-LDQYIYDHESSNGKR---TLEWRTVYQIAVG 312
H NIV + K + L+ + + GS LD I H + G+ L+ T+ I
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLD--IIKHIVAKGEHKSGVLDESTIATILRE 124
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAK---------QTEKKESF 363
+ GLEYLH+ I H D+K NI L ED +I+DFG++ + + +++F
Sbjct: 125 VLEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
Query: 364 ISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFP 423
+ GT ++APEV G K+D++S+G+ E+ G + +Y P
Sbjct: 182 V------GTPCWMAPEVM-EQVRGYDFKADIWSFGITAIELATG-------AAPYHKYPP 227
Query: 424 NAIYKQIETEYDFQLDGVVTEEEKEMAKK-----MILVSLWCIQTHPPDRPSMTKVV 475
+ L+ V ++KEM KK ++SL C+Q P RP+ +++
Sbjct: 228 MKVLMLTLQNDPPSLETGV--QDKEMLKKYGKSFRKMISL-CLQKDPEKRPTAAELL 281
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 133/300 (44%), Gaps = 49/300 (16%)
Query: 206 SFSDKLGQGGYADVY--------KGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRT-- 255
+ LG+G + V K + VAVK++K+ D EE ++++ S
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD--DATEEDLSDLVSEMEMMK 95
Query: 256 ---SHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHE------SSNGKRTLEWRTV 306
H NI+ LG C + +I E+ G+L +Y+ S + R E +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 307 YQIAVG----IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKES 362
++ V +ARG+EYL + + +H D+ N+ + E+ KI+DFGLA+ +
Sbjct: 156 FKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY 212
Query: 363 FISMLDTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
+ + R ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFT--------------- 254
Query: 422 FPNAIYKQIETEYDFQL--DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
+ Y I E F+L +G ++ ++ ++ C P RP+ ++VE L+
Sbjct: 255 LGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 106/222 (47%), Gaps = 18/222 (8%)
Query: 190 LAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPDGR----LVAVKVMKN--LKDNGE 243
L P+ + R + LG+G + +VY+G + + VAVK K DN E
Sbjct: 11 LVPRGSPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE 70
Query: 244 EFINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEW 303
+F++E + H +IV +G E++ +I E P G L Y+ K +L+
Sbjct: 71 KFMSEAVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGHYL-----ERNKNSLKV 124
Query: 304 RTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESF 363
T+ ++ I + + YL +I VH DI NI + C K+ DFGL++ E ++ +
Sbjct: 125 LTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY 181
Query: 364 ISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
+ + TR +++PE +F + SDV+ + + + E++
Sbjct: 182 KASV-TRLPIKWMSPESI--NFRRFTTASDVWMFAVCMWEIL 220
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 21/207 (10%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
++ R + KLG G + +V+ T VAVK MK + E F+ E + H
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 237
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V L K+ +I EFM GSL ++ E S K+ L + + IA G+
Sbjct: 238 KLVK-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGS--KQPLP--KLIDFSAQIAEGMA 292
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
++ + +H D++ NI + KI+DFGLA+ + + + AP
Sbjct: 293 FIEQR---NYIHRDLRAANILVSASLVCKIADFGLAR-----------VGAKFPIKWTAP 338
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMV 405
E +FG + KSDV+S+G+++ E+V
Sbjct: 339 EAI--NFGSFTIKSDVWSFGILLMEIV 363
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 139/322 (43%), Gaps = 50/322 (15%)
Query: 188 GSLAPKRFSYSDV--------RRMTKSFSDKLGQGGYADVYKGTL-------PDGRLVAV 232
S+ P+ FS +DV R + S +LGQG + VY+G P+ R VA+
Sbjct: 2 ASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAI 60
Query: 233 KVMKNLKDNGE--EFINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIY 290
K + E EF+NE + + + ++V LG + + +I E M G L Y+
Sbjct: 61 KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 120
Query: 291 DHESSNGKRTL----EWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP 346
+ + + Q+A IA G+ YL+ + VH D+ N + EDF
Sbjct: 121 SLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTV 177
Query: 347 KISDFGLAKQTEKKESFISMLDTRGTAG-----YIAPEVFCRHFGGVSHKSDVYSYGMMI 401
KI DFG+ + + + + +G G +++PE G + SDV+S+G+++
Sbjct: 178 KIGDFGMTRDIYETDYY-----RKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVL 230
Query: 402 HEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCI 461
E+ + + + + +Q+ F ++G + ++ + + C
Sbjct: 231 WEI----------ATLAEQPYQGLSNEQV---LRFVMEGGLLDKPDNCPDMLFELMRMCW 277
Query: 462 QTHPPDRPSMTKVVEMLEGSIE 483
Q +P RPS +++ ++ +E
Sbjct: 278 QYNPKMRPSFLEIISSIKEEME 299
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 11/207 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
+V R T ++LG G + +V+ G VAVK +K + + F+ E + + H
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 64
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V ++ +I E+M NGSL ++ S K T+ + +A IA G+
Sbjct: 65 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTIN--KLLDMAAQIAEGMA 119
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
++ +H +++ NI + + KI+DFGLA+ E E + + + + AP
Sbjct: 120 FIEER---NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAP 175
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMV 405
E ++G + KSDV+S+G+++ E+V
Sbjct: 176 EAI--NYGTFTIKSDVWSFGILLTEIV 200
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 211 LGQGGYADVYKGTLPDGR----LVAVKVMKN--LKDNGEEFINEVASISRTSHVNIVPFL 264
LG+G + +VY+G + + VAVK K DN E+F++E + H +IV +
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
G E++ +I E P G L Y+ K +L+ T+ ++ I + + YL
Sbjct: 76 GII-EEEPTWIIMELYPYGELGHYL-----ERNKNSLKVLTLVLYSLQICKAMAYLE--- 126
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRH 384
+I VH DI NI + C K+ DFGL++ E ++ + + + TR +++PE +
Sbjct: 127 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TRLPIKWMSPESI--N 183
Query: 385 FGGVSHKSDVYSYGMMIHEMV 405
F + SDV+ + + + E++
Sbjct: 184 FRRFTTASDVWMFAVCMWEIL 204
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 132/296 (44%), Gaps = 30/296 (10%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPD------GRLVAVKVMKNLKDNGE--EFINEVA 250
+V R + +LGQG + VY+G D VAVK + E EF+NE +
Sbjct: 14 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 73
Query: 251 SISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIY----DHESSNGKRTLEWRTV 306
+ + ++V LG + + ++ E M +G L Y+ + E++ G+ + +
Sbjct: 74 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 133
Query: 307 YQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISM 366
Q+A IA G+ YL+ + VH ++ N + DF KI DFG+ + + + +
Sbjct: 134 IQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 190
Query: 367 LDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAI 426
++APE G + SD++S+G+++ E+ S + + +
Sbjct: 191 GKGLLPVRWMAPESLKD--GVFTTSSDMWSFGVVLWEI----------TSLAEQPYQGLS 238
Query: 427 YKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSI 482
+Q+ F +DG ++ +++ + C Q +P RP+ ++V +L+ +
Sbjct: 239 NEQV---LKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL 291
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 132/296 (44%), Gaps = 30/296 (10%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPD------GRLVAVKVMKNLKDNGE--EFINEVA 250
+V R + +LGQG + VY+G D VAVK + E EF+NE +
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 251 SISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIY----DHESSNGKRTLEWRTV 306
+ + ++V LG + + ++ E M +G L Y+ + E++ G+ + +
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 307 YQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISM 366
Q+A IA G+ YL+ + VH ++ N + DF KI DFG+ + + + +
Sbjct: 133 IQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 189
Query: 367 LDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAI 426
++APE G + SD++S+G+++ E+ S + + +
Sbjct: 190 GKGLLPVRWMAPESLKD--GVFTTSSDMWSFGVVLWEI----------TSLAEQPYQGLS 237
Query: 427 YKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSI 482
+Q+ F +DG ++ +++ + C Q +P RP+ ++V +L+ +
Sbjct: 238 NEQV---LKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL 290
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 113/237 (47%), Gaps = 34/237 (14%)
Query: 192 PKRFSYS---DVRRMTKSFSDKLGQGGYADVY----KGTLP--DGRLVAVKVMKNLKDNG 242
P+ FS + ++R +LG+G + V+ LP D LVAVK +K ++
Sbjct: 27 PQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA 86
Query: 243 -EEFINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHES-----SN 296
++F E ++ H +IV F G C E + +++E+M +G L++++ H +
Sbjct: 87 RQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAG 146
Query: 297 GKRT----LEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFG 352
G+ L + +A +A G+ YL + VH D+ N + + KI DFG
Sbjct: 147 GEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFG 203
Query: 353 LAKQTEKKESF----ISMLDTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEM 404
+++ + + +ML R ++ PE + R F + +SDV+S+G+++ E+
Sbjct: 204 MSRDIYSTDYYRVGGRTMLPIR----WMPPESILYRKF---TTESDVWSFGVVLWEI 253
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 97/199 (48%), Gaps = 11/199 (5%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLG 265
+F +LG G + V G VA+K++K + +EFI E + SH +V G
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
C +++ +I E+M NG L Y+ + + + + + ++ + +EYL +
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLREM-----RHRFQTQQLLEMCKDVCEAMEYLE---S 123
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
+ +H D+ N +++ K+SDFGL++ E + S ++ + PEV +
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSRGSKFPVRWSPPEVLM--Y 180
Query: 386 GGVSHKSDVYSYGMMIHEM 404
S KSD++++G+++ E+
Sbjct: 181 SKFSSKSDIWAFGVLMWEI 199
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 141/322 (43%), Gaps = 50/322 (15%)
Query: 188 GSLAPKRFSYSDV--------RRMTKSFSDKLGQGGYADVYKGTL-------PDGRLVAV 232
S+ P+ FS +DV R + S +LGQG + VY+G P+ R VA+
Sbjct: 2 ASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAI 60
Query: 233 KVMKNLKDNGE--EFINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIY 290
K + E EF+NE + + + ++V LG + + +I E M G L Y+
Sbjct: 61 KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 120
Query: 291 ----DHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP 346
+ E++ + Q+A IA G+ YL+ + VH D+ N + EDF
Sbjct: 121 SLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTV 177
Query: 347 KISDFGLAKQTEKKESFISMLDTRGTAG-----YIAPEVFCRHFGGVSHKSDVYSYGMMI 401
KI DFG+ + + + + +G G +++PE G + SDV+S+G+++
Sbjct: 178 KIGDFGMTRDIYETDYY-----RKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVL 230
Query: 402 HEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCI 461
E+ + + + + +Q+ F ++G + ++ + + C
Sbjct: 231 WEI----------ATLAEQPYQGLSNEQV---LRFVMEGGLLDKPDNCPDMLFELMRMCW 277
Query: 462 QTHPPDRPSMTKVVEMLEGSIE 483
Q +P RPS +++ ++ +E
Sbjct: 278 QYNPKMRPSFLEIISSIKEEME 299
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 211 LGQGGYADVYKGTL--PDGR--LVAVKVMKN--LKDNGEEFINEVASISRTSHVNIVPFL 264
+G G + +V +G L P + VA+K +K + EF++E + + + H NI+
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
G ++ EFM NG+LD ++ ++G+ T+ + + GIA G+ YL
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFL---RLNDGQFTV--IQLVGMLRGIASGMRYL---A 135
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKES---FISMLDTRGTAGYIAPEVF 381
+ VH D+ NI ++ + K+SDFGL++ E+ S S L + + APE
Sbjct: 136 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI 195
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMV 405
F + SD +SYG+++ E++
Sbjct: 196 A--FRKFTSASDAWSYGIVMWEVM 217
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 211 LGQGGYADVYKGTLPDGR----LVAVKVMKN--LKDNGEEFINEVASISRTSHVNIVPFL 264
LG+G + +VY+G + + VAVK K DN E+F++E + H +IV +
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
G E++ +I E P G L Y+ K +L+ T+ ++ I + + YL
Sbjct: 80 GII-EEEPTWIIMELYPYGELGHYL-----ERNKNSLKVLTLVLYSLQICKAMAYLE--- 130
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRH 384
+I VH DI NI + C K+ DFGL++ E ++ + + + TR +++PE +
Sbjct: 131 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TRLPIKWMSPESI--N 187
Query: 385 FGGVSHKSDVYSYGMMIHEMV 405
F + SDV+ + + + E++
Sbjct: 188 FRRFTTASDVWMFAVCMWEIL 208
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 209 DKLGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFC 267
+KLG+G Y VYK + G++VA+K + ++ + +E I E++ + + ++V + G
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVP-VESDLQEIIKEISIMQQCDSPHVVKYYGSY 93
Query: 268 YEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIR 327
++ ++ E+ GS+ I +TL + I +GLEYLH +R
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDIIRLR-----NKTLTEDEIATILQSTLKGLEYLH---FMR 145
Query: 328 IVHLDIKPHNIRLDEDFCPKISDFGLAKQ----TEKKESFISMLDTRGTAGYIAPEVFCR 383
+H DIK NI L+ + K++DFG+A Q K+ I GT ++APEV
Sbjct: 146 KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI------GTPFWMAPEVIQE 199
Query: 384 HFGGVSHKSDVYSYGMMIHEMVIGR 408
G + +D++S G+ EM G+
Sbjct: 200 I--GYNCVADIWSLGITAIEMAEGK 222
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 209 DKLGQGGYADVYKGTLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFLG 265
+K+G+G Y VYK GR+VA+K ++ + +D G I E++ + H NIV +
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ L++EFM + + D + + + +YQ+ G+A ++
Sbjct: 87 VIHSERCLTLVFEFMEKDL--KKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH------ 138
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
RI+H D+KP N+ ++ D K++DFGLA+ S T Y AP+V
Sbjct: 139 -RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR--SYTHEVVTLWYRAPDVLMGS- 194
Query: 386 GGVSHKSDVYSYGMMIHEMVIGR 408
S D++S G + EM+ G+
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 209 DKLGQGGYADVYKGTLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFLG 265
+K+G+G Y VYK GR+VA+K ++ + +D G I E++ + H NIV +
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ L++EFM + + D + + + +YQ+ G+A ++
Sbjct: 87 VIHSERCLTLVFEFMEKDL--KKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH------ 138
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
RI+H D+KP N+ ++ D K++DFGLA+ S T Y AP+V
Sbjct: 139 -RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR--SYTHEVVTLWYRAPDVLMGS- 194
Query: 386 GGVSHKSDVYSYGMMIHEMVIGR 408
S D++S G + EM+ G+
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 105/222 (47%), Gaps = 23/222 (10%)
Query: 200 VRRMTKSFSDKLGQGGYADVY----KGTLP--DGRLVAVKVMKNLKDNG-EEFINEVASI 252
++R +LG+G + V+ LP D LVAVK +K ++ ++F E +
Sbjct: 9 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 68
Query: 253 SRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHES-----SNGKRT----LEW 303
+ H +IV F G C E + +++E+M +G L++++ H + G+ L
Sbjct: 69 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 128
Query: 304 RTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESF 363
+ +A +A G+ YL + VH D+ N + + KI DFG+++ + +
Sbjct: 129 GQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY 185
Query: 364 ISMLDTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEM 404
T ++ PE + R F + +SDV+S+G+++ E+
Sbjct: 186 RVGGRTMLPIRWMPPESILYRKF---TTESDVWSFGVVLWEI 224
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 127/295 (43%), Gaps = 44/295 (14%)
Query: 211 LGQGGYADVYKGTL--PDGRL----VAVKVMKNLKDNGE--EFINEVASISRTSHVNIVP 262
LG+G + V K T GR VAVK++K E + ++E + + +H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 263 FLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSN------------------GKRTLEWR 304
G C + LI E+ GSL ++ + +R L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 305 TVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFI 364
+ A I++G++YL +++VH D+ NI + E KISDFGL++ +++S++
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 365 SMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPN 424
R ++A E H + +SDV+S+G+++ E+V N + P
Sbjct: 208 KRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVTLGGNPYPGIP------PE 259
Query: 425 AIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
++ ++T + + +EE M + L C + P RP + + LE
Sbjct: 260 RLFNLLKTGHRMERPDNCSEE-------MYRLMLQCWKQEPDKRPVFADISKDLE 307
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 105/222 (47%), Gaps = 23/222 (10%)
Query: 200 VRRMTKSFSDKLGQGGYADVY----KGTLP--DGRLVAVKVMKNLKDNG-EEFINEVASI 252
++R +LG+G + V+ LP D LVAVK +K ++ ++F E +
Sbjct: 15 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 74
Query: 253 SRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHES-----SNGKRT----LEW 303
+ H +IV F G C E + +++E+M +G L++++ H + G+ L
Sbjct: 75 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 134
Query: 304 RTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESF 363
+ +A +A G+ YL + VH D+ N + + KI DFG+++ + +
Sbjct: 135 GQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY 191
Query: 364 ISMLDTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEM 404
T ++ PE + R F + +SDV+S+G+++ E+
Sbjct: 192 RVGGRTMLPIRWMPPESILYRKF---TTESDVWSFGVVLWEI 230
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 123/273 (45%), Gaps = 39/273 (14%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 126
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
R++H DIKP N+ L KI+DFG + D GT Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYLPPEM----I 178
Query: 386 GGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVT 443
G H K D++S G++ +E ++G+ + + YK+I + +F VT
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRI-SRVEFTFPDFVT 230
Query: 444 EEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
E +++ ++ ++ +P RP + +V+E
Sbjct: 231 EGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 117/234 (50%), Gaps = 29/234 (12%)
Query: 199 DVRRMTKSFSDK-LGQGGYADVYKGTLPDGRLV-AVKVMKN---LKDNGEEFIN-EVASI 252
D R M + + LG+GG+A Y+ T D + V A KV+ LK + +E ++ E+A
Sbjct: 37 DPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH 96
Query: 253 SRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVG 312
+ ++V F GF + ++ E SL + H+ E R + +
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTI- 152
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT----EKKESFISMLD 368
+G++YLH N R++H D+K N+ L++D KI DFGLA + E+K++
Sbjct: 153 --QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLC---- 203
Query: 369 TRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYF 422
GT YIAPEV C+ G S + D++S G +++ +++G+ + SC E +
Sbjct: 204 --GTPNYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGK--PPFETSCLKETY 251
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 207 FSDKLGQGGYADVYK---GTLPD--GRLVAVKVMKN-LKDNGEEFINEVASISRTSHVNI 260
F +LG+G + V L D G +VAVK +++ +++ +F E+ + H NI
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 261 VPFLGFCYEKKKR--ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
V + G CY +R LI E++P GSL Y+ H ++ + Q I +G+E
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER-----IDHIKLLQYTSQICKGME 131
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT-EKKESFISMLDTRGTAGYIA 377
YL R +H D+ NI ++ + KI DFGL K + KE + A
Sbjct: 132 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEM 404
PE V+ SDV+S+G++++E+
Sbjct: 189 PESLTESKFSVA--SDVWSFGVVLYEL 213
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 117/234 (50%), Gaps = 29/234 (12%)
Query: 199 DVRRMTKSFSDK-LGQGGYADVYKGTLPDGRLV-AVKVMKN---LKDNGEEFIN-EVASI 252
D R M + + LG+GG+A Y+ T D + V A KV+ LK + +E ++ E+A
Sbjct: 37 DPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH 96
Query: 253 SRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVG 312
+ ++V F GF + ++ E SL + H+ E R + +
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTI- 152
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT----EKKESFISMLD 368
+G++YLH N R++H D+K N+ L++D KI DFGLA + E+K+ D
Sbjct: 153 --QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK------D 201
Query: 369 TRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYF 422
GT YIAPEV C+ G S + D++S G +++ +++G+ + SC E +
Sbjct: 202 LCGTPNYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGK--PPFETSCLKETY 251
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHV 258
+V R T ++LG G +V+ G VAVK +K + + F+ E + + H
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 259 NIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
+V ++ +I E+M NGSL ++ S K T+ + +A IA G+
Sbjct: 69 RLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTI--NKLLDMAAQIAEGMA 123
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
++ +H D++ NI + + KI+DFGLA+ E E + + + AP
Sbjct: 124 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEX-TAREGAKFPIKWTAP 179
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMV 405
E ++G + KSDV+S+G+++ E+V
Sbjct: 180 EAI--NYGTFTIKSDVWSFGILLTEIV 204
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 133/298 (44%), Gaps = 45/298 (15%)
Query: 206 SFSDKLGQGGYADVYK----GTLPDGRLVAVKV-MKNLKDNGEE-----FINEVASISRT 255
+ LG+G + V G D AV V +K LKD+ E ++E+ +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 256 -SHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHE------SSNGKRTLEWRTVYQ 308
H NI+ LG C + +I E+ G+L +Y+ S + R E + ++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 309 IAVG----IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFI 364
V +ARG+EYL + + +H D+ N+ + E+ KI+DFGLA+ + +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 365 SMLDTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFP 423
+ + R ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 215 NTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFT---------------LG 256
Query: 424 NAIYKQIETEYDFQL--DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
+ Y I E F+L +G ++ ++ ++ C P RP+ ++VE L+
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 132/298 (44%), Gaps = 45/298 (15%)
Query: 206 SFSDKLGQGGYADVYK----GTLPDGRLVAVKV-MKNLKDNGEE-----FINEVASISRT 255
+ LG+G + V G D AV V +K LKD+ E ++E+ +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 256 -SHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHE------SSNGKRTLEWRTVYQ 308
H NI+ LG C + +I E+ G+L +Y+ S + R E + ++
Sbjct: 98 GKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 309 IAVG----IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFI 364
V +ARG+EYL + + +H D+ N+ + E+ KI+DFGLA+ + +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 365 SMLDTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFP 423
+ R ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFT---------------LG 256
Query: 424 NAIYKQIETEYDFQL--DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
+ Y I E F+L +G ++ ++ ++ C P RP+ ++VE L+
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 41/288 (14%)
Query: 211 LGQGGYADVYKG------TLPDGRLVAVKVMKNLKDNGEE--FINEVASISRTSH-VNIV 261
LG+G + V + R VAVK++K + E ++E+ + H +N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 262 PFLGFCYEKK-KRALIYEFMPNGSLDQYIYDHESS--------NGKRTLEWRTVYQIAVG 312
LG C + +I EF G+L Y+ + TLE Y V
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQV- 153
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT 372
A+G+E+L + + +H D+ NI L E KI DFGLA+ K ++ D R
Sbjct: 154 -AKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP 209
Query: 373 AGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIE 431
++APE +F R + + +SDV+S+G+++ E+ S + +P +I+
Sbjct: 210 LKWMAPETIFDRVY---TIQSDVWSFGVLLWEI----------FSLGASPYPGV---KID 253
Query: 432 TEYDFQL-DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
E+ +L +G +M L C P RP+ +++VE L
Sbjct: 254 EEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 117/234 (50%), Gaps = 29/234 (12%)
Query: 199 DVRRMTKSFSDK-LGQGGYADVYKGTLPDGRLV-AVKVMKN---LKDNGEEFIN-EVASI 252
D R M + + LG+GG+A Y+ T D + V A KV+ LK + +E ++ E+A
Sbjct: 21 DPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH 80
Query: 253 SRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVG 312
+ ++V F GF + ++ E SL + H+ E R + +
Sbjct: 81 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTI- 136
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT----EKKESFISMLD 368
+G++YLH N R++H D+K N+ L++D KI DFGLA + E+K+ D
Sbjct: 137 --QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK------D 185
Query: 369 TRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYF 422
GT YIAPEV C+ G S + D++S G +++ +++G+ + SC E +
Sbjct: 186 LCGTPNYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGK--PPFETSCLKETY 235
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 132/316 (41%), Gaps = 41/316 (12%)
Query: 186 NYGSLAPKRFSYSD---VRRMTKSFSDKLGQGGYADVYKGTL-----PDGRL-VAVKVMK 236
+Y + P + Y++ R F LG G + V + T D L VAVK++K
Sbjct: 26 SYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK 85
Query: 237 NLK--DNGEEFINEVASISRT-SHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIY--- 290
+ D E ++E+ +S H NIV LG C +I E+ G L ++
Sbjct: 86 STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS 145
Query: 291 -----DHESSNGKRTLEWRTVYQIAVGIARGLEYL-HRGCNIRIVHLDIKPHNIRLDEDF 344
D + TL R + + +A+G+ +L + C +H D+ N+ L
Sbjct: 146 RVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGH 201
Query: 345 CPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGV-SHKSDVYSYGMMIHE 403
KI DFGLA+ ++I + R ++APE F V + +SDV+SYG+++ E
Sbjct: 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI---FDCVYTVQSDVWSYGILLWE 258
Query: 404 MVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQT 463
+ N + +S++ YK ++ DG + K + + C
Sbjct: 259 IFSLGLNPYPGILVNSKF-----YKLVK-------DGYQMAQPAFAPKNIYSIMQACWAL 306
Query: 464 HPPDRPSMTKVVEMLE 479
P RP+ ++ L+
Sbjct: 307 EPTHRPTFQQICSFLQ 322
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 123/273 (45%), Gaps = 39/273 (14%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 131
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
R++H DIKP N+ L KI+DFG + D GT Y+ PE+
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYLPPEM----I 183
Query: 386 GGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVT 443
G H K D++S G++ +E ++G+ + + YK+I + +F VT
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRI-SRVEFTFPDFVT 235
Query: 444 EEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
E +++ ++ ++ +P RP + +V+E
Sbjct: 236 EGARDLISRL-------LKHNPSQRPMLREVLE 261
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 123/273 (45%), Gaps = 39/273 (14%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 127
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
R++H DIKP N+ L KI+DFG + D GT Y+ PE+
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYLPPEM----I 179
Query: 386 GGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVT 443
G H K D++S G++ +E ++G+ + + YK+I + +F VT
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRI-SRVEFTFPDFVT 231
Query: 444 EEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
E +++ ++ ++ +P RP + +V+E
Sbjct: 232 EGARDLISRL-------LKHNPSQRPMLREVLE 257
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 123/273 (45%), Gaps = 39/273 (14%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 126
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
R++H DIKP N+ L KI+DFG + D GT Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYLPPEM----I 178
Query: 386 GGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVT 443
G H K D++S G++ +E ++G+ + + YK+I + +F VT
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRI-SRVEFTFPDFVT 230
Query: 444 EEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
E +++ ++ ++ +P RP + +V+E
Sbjct: 231 EGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 99/216 (45%), Gaps = 24/216 (11%)
Query: 207 FSDKLGQGGYADVYKGTLPD-GRLVAVKVMKNLK--DNGEEFINEVASISRTSHVNIVPF 263
SD LGQG A+V++G G L A+KV N+ + + E + + +H NIV
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL 72
Query: 264 LGFCYEKKKR--ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
E R LI EF P GSL + + ++ G E+ V + VG G+ +L
Sbjct: 73 FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG---GMNHLR 129
Query: 322 RGCNIRIVHLDIKPHNIRL----DEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIA 377
IVH +IKP NI D K++DFG A++ E E F+S+ GT Y+
Sbjct: 130 ENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY---GTEEYLH 183
Query: 378 PEVFCRHFGGVSHKS------DVYSYGMMIHEMVIG 407
P+++ R H+ D++S G+ + G
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 125/279 (44%), Gaps = 34/279 (12%)
Query: 210 KLGQGGYADVYKGT-LPDGRLVAVKVMKNLKDNGEE--FINEVASISRTSHVN-IVPFLG 265
++G+G Y V K P G+++AVK +++ D E+ + ++ + R+S IV F G
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ + + E M + S D++ Y + S + + +I + + L +L N
Sbjct: 89 ALFREGDCWICMELM-STSFDKF-YKYVYSVLDDVIPEEILGKITLATVKALNHLKE--N 144
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR--GTAGYIAPEVF-- 381
++I+H DIKP NI LD K+ DFG++ Q S+ TR G Y+APE
Sbjct: 145 LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD-----SIAKTRDAGCRPYMAPERIDP 199
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFP----NAIYKQIETEYDFQ 437
G +SDV+S G+ ++E+ GR FP N+++ Q+
Sbjct: 200 SASRQGYDVRSDVWSLGITLYELATGR-------------FPYPKWNSVFDQLTQVVKGD 246
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
+ EE+E + I C+ RP ++++
Sbjct: 247 PPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 134/318 (42%), Gaps = 43/318 (13%)
Query: 186 NYGSLAPKRFSYSD---VRRMTKSFSDKLGQGGYADVYKGTL-----PDGRL-VAVKVMK 236
+Y + P + Y++ R F LG G + V + T D L VAVK++K
Sbjct: 26 SYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK 85
Query: 237 NLK--DNGEEFINEVASISRT-SHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYI---- 289
+ D E ++E+ +S H NIV LG C +I E+ G L ++
Sbjct: 86 STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKR 145
Query: 290 -----YDHESS-NGKRTLEWRTVYQIAVGIARGLEYL-HRGCNIRIVHLDIKPHNIRLDE 342
Y + S N + L R + + +A+G+ +L + C +H D+ N+ L
Sbjct: 146 PPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTN 201
Query: 343 DFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGV-SHKSDVYSYGMMI 401
KI DFGLA+ ++I + R ++APE F V + +SDV+SYG+++
Sbjct: 202 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI---FDCVYTVQSDVWSYGILL 258
Query: 402 HEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCI 461
E+ N + +S++ YK ++ DG + K + + C
Sbjct: 259 WEIFSLGLNPYPGILVNSKF-----YKLVK-------DGYQMAQPAFAPKNIYSIMQACW 306
Query: 462 QTHPPDRPSMTKVVEMLE 479
P RP+ ++ L+
Sbjct: 307 ALEPTHRPTFQQICSFLQ 324
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 26/229 (11%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPDGR---LVAVKVMKNLKDNGEE 244
G++ R+ ++ R F D LG G +++V D R LVA+K + G+E
Sbjct: 3 GAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAE--DKRTQKLVAIKCIAKEALEGKE 60
Query: 245 --FINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE 302
NE+A + + H NIV LI + + G L +D G T
Sbjct: 61 GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTE- 115
Query: 303 WRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNI---RLDEDFCPKISDFGLAKQTEK 359
R ++ + ++YLH ++ IVH D+KP N+ LDED ISDFGL+K +
Sbjct: 116 -RDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP 171
Query: 360 KESFISMLDTR-GTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
S+L T GT GY+APEV + S D +S G++ + ++ G
Sbjct: 172 G----SVLSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVIAYILLCG 214
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 26/229 (11%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPDGR---LVAVKVMKNLKDNGEE 244
G++ R+ ++ R F D LG G +++V D R LVA+K + G+E
Sbjct: 3 GAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAE--DKRTQKLVAIKCIAKKALEGKE 60
Query: 245 --FINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE 302
NE+A + + H NIV LI + + G L +D G T
Sbjct: 61 GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTE- 115
Query: 303 WRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNI---RLDEDFCPKISDFGLAKQTEK 359
R ++ + ++YLH ++ IVH D+KP N+ LDED ISDFGL+K +
Sbjct: 116 -RDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP 171
Query: 360 KESFISMLDTR-GTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
S+L T GT GY+APEV + S D +S G++ + ++ G
Sbjct: 172 G----SVLSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVIAYILLCG 214
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 132/298 (44%), Gaps = 45/298 (15%)
Query: 206 SFSDKLGQGGYADVYK----GTLPDGRLVAVKV-MKNLKDNGEE-----FINEVASISRT 255
+ LG+G + V G D AV V +K LKD+ E ++E+ +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 256 -SHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHE------SSNGKRTLEWRTVYQ 308
H NI+ LG C + +I E+ G+L +Y+ S + R E + ++
Sbjct: 98 GKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 309 IAVG----IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFI 364
V +ARG+EYL + + +H D+ N+ + E+ KI+DFGLA+ + +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 365 SMLDTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFP 423
+ R ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFT---------------LG 256
Query: 424 NAIYKQIETEYDFQL--DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
+ Y I E F+L +G ++ ++ ++ C P RP+ ++VE L+
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 26/229 (11%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPDGR---LVAVKVMKNLKDNGEE 244
G++ R+ ++ R F D LG G +++V D R LVA+K + G+E
Sbjct: 3 GAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAE--DKRTQKLVAIKCIAKEALEGKE 60
Query: 245 --FINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE 302
NE+A + + H NIV LI + + G L +D G T
Sbjct: 61 GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTE- 115
Query: 303 WRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNI---RLDEDFCPKISDFGLAKQTEK 359
R ++ + ++YLH ++ IVH D+KP N+ LDED ISDFGL+K +
Sbjct: 116 -RDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP 171
Query: 360 KESFISMLDTR-GTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
S+L T GT GY+APEV + S D +S G++ + ++ G
Sbjct: 172 G----SVLSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVIAYILLCG 214
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 211 LGQGGYADVYKG-TLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCYE 269
LGQG + V K D R A+K +++ ++ ++EV ++ +H +V + E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWLE 73
Query: 270 K----------KKRALIY---EFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARG 316
+ KK++ ++ E+ N +L I+ E+ N +R WR QI
Sbjct: 74 RRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHS-ENLNQQRDEYWRLFRQIL----EA 128
Query: 317 LEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR------ 370
L Y+H I+H ++KP NI +DE KI DFGLAK + + LD++
Sbjct: 129 LSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILK-LDSQNLPGSS 184
Query: 371 -------GTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
GTA Y+A EV G + K D YS G++ E +
Sbjct: 185 DNLTSAIGTAXYVATEVLD-GTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 125/274 (45%), Gaps = 41/274 (14%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 127
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR-GTAGYIAPEVFCRH 384
R++H DIKP N+ L KI+DFG + S DT GT Y+ PE+
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRDTLCGTLDYLPPEM---- 178
Query: 385 FGGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVV 442
G H K D++S G++ +E ++G+ + + YK+I + +F V
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRI-SRVEFTFPDFV 230
Query: 443 TEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
TE +++ ++ ++ +P RP + +V+E
Sbjct: 231 TEGARDLISRL-------LKHNPSQRPMLREVLE 257
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 26/229 (11%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPDGR---LVAVKVMKNLKDNGEE 244
G++ R+ ++ R F D LG G +++V D R LVA+K + G+E
Sbjct: 3 GAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAE--DKRTQKLVAIKCIAKEALEGKE 60
Query: 245 --FINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE 302
NE+A + + H NIV LI + + G L +D G T
Sbjct: 61 GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTE- 115
Query: 303 WRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNI---RLDEDFCPKISDFGLAKQTEK 359
R ++ + ++YLH ++ IVH D+KP N+ LDED ISDFGL+K +
Sbjct: 116 -RDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP 171
Query: 360 KESFISMLDTR-GTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
S+L T GT GY+APEV + S D +S G++ + ++ G
Sbjct: 172 G----SVLSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVIAYILLCG 214
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 116/234 (49%), Gaps = 29/234 (12%)
Query: 199 DVRRMTKSFSDK-LGQGGYADVYKGTLPDGRLV-AVKVMKN---LKDNGEEFIN-EVASI 252
D R M + + LG+GG+A Y+ T D + V A KV+ LK + +E ++ E+A
Sbjct: 37 DPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH 96
Query: 253 SRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVG 312
+ ++V F GF + ++ E SL + H+ E R + +
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTI- 152
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT----EKKESFISMLD 368
+G++YLH N R++H D+K N+ L++D KI DFGLA + E+K+
Sbjct: 153 --QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLC---- 203
Query: 369 TRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYF 422
GT YIAPEV C+ G S + D++S G +++ +++G+ + SC E +
Sbjct: 204 --GTPNYIAPEVLCKK--GHSFEVDIWSLGCILYTLLVGK--PPFETSCLKETY 251
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 17/202 (8%)
Query: 211 LGQGGYADVYKGTL--PDGR--LVAVKVMKN--LKDNGEEFINEVASISRTSHVNIVPFL 264
+G G +V G L P R VA+K +K + +F++E + + + H NI+
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
G + ++ E+M NGSLD ++ H +G+ T+ + + G+ G+ YL
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTH---DGQFTI--MQLVGMLRGVGAGMRYL---S 168
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKK-ESFISMLDTRGTAGYIAPEVFCR 383
++ VH D+ N+ +D + K+SDFGL++ E ++ + + + APE
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIA- 227
Query: 384 HFGGVSHKSDVYSYGMMIHEMV 405
F S SDV+S+G+++ E++
Sbjct: 228 -FRTFSSASDVWSFGVVMWEVL 248
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 124/268 (46%), Gaps = 41/268 (15%)
Query: 230 VAVKVMKNLKDNGEEFINEVASISRT-----SHVNIVPFLGFCYEKKKRALIYEFMPNGS 284
VAVK++K+ D E+ ++++ S H NI+ LG C + +I E+ G+
Sbjct: 59 VAVKMLKD--DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 116
Query: 285 LDQYIYDHE------SSNGKRTLEWRTVYQIAVG----IARGLEYLHRGCNIRIVHLDIK 334
L +Y+ S + R E + ++ V +ARG+EYL + + +H D+
Sbjct: 117 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLA 173
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE-VFCRHFGGVSHKSD 393
N+ + E+ KI+DFGLA+ + + + R ++APE +F R + +H+SD
Sbjct: 174 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY---THQSD 230
Query: 394 VYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQL--DGVVTEEEKEMAK 451
V+S+G+++ E+ + Y I E F+L +G ++
Sbjct: 231 VWSFGVLMWEIFT---------------LGGSPYPGIPVEELFKLLKEGHRMDKPANCTN 275
Query: 452 KMILVSLWCIQTHPPDRPSMTKVVEMLE 479
++ ++ C P RP+ ++VE L+
Sbjct: 276 ELYMMMRDCWHAVPSQRPTFKQLVEDLD 303
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 24/205 (11%)
Query: 211 LGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFINEVAS-----ISRTSHVNIVPFL 264
+G+G Y V K D GR+VA+K K L+ + ++ + ++A + + H N+V L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIK--KFLESDDDKMVKKIAMREIKLLKQLRHENLVNLL 90
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
C +KK+ L++EF+ + LD NG L+++ V + I G+ + H
Sbjct: 91 EVCKKKKRWYLVFEFVDHTILDDL---ELFPNG---LDYQVVQKYLFQIINGIGFCHSH- 143
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRH 384
I+H DIKP NI + + K+ DFG A+ D T Y APE+
Sbjct: 144 --NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYD--DEVATRWYRAPELLV-- 197
Query: 385 FGGVSHKS--DVYSYGMMIHEMVIG 407
G V + DV++ G ++ EM +G
Sbjct: 198 -GDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 41/288 (14%)
Query: 211 LGQGGYADVYKG------TLPDGRLVAVKVMKNLKDNGEE--FINEVASISRTSH-VNIV 261
LG+G + V + R VAVK++K + E ++E+ + H +N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 262 PFLGFCYEKK-KRALIYEFMPNGSLDQYIYDHESS--------NGKRTLEWRTVYQIAVG 312
LG C + +I EF G+L Y+ + TLE Y V
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQV- 153
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT 372
A+G+E+L + + +H D+ NI L E KI DFGLA+ K ++ D R
Sbjct: 154 -AKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 209
Query: 373 AGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIE 431
++APE +F R + + +SDV+S+G+++ E+ S + +P +I+
Sbjct: 210 LKWMAPETIFDRVY---TIQSDVWSFGVLLWEI----------FSLGASPYPGV---KID 253
Query: 432 TEYDFQL-DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
E+ +L +G +M L C P RP+ +++VE L
Sbjct: 254 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 135/303 (44%), Gaps = 42/303 (13%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTL-------PDGRLVAVKVMKNLKDNGE--EFINEV 249
+V R + S +LGQG + VY+G P+ R VA+K + E EF+NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 66
Query: 250 ASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIY----DHESSNGKRTLEWRT 305
+ + + ++V LG + + +I E M G L Y+ + E++
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+ Q+A IA G+ YL+ + VH D+ N + EDF KI DFG+ + + + +
Sbjct: 127 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYY-- 181
Query: 366 MLDTRGTAG-----YIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSE 420
+G G +++PE G + SDV+S+G+++ E+ + + +
Sbjct: 182 ---RKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVLWEI----------ATLAEQ 226
Query: 421 YFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEG 480
+ +Q+ F ++G + ++ ++ + C Q +P RPS +++ ++
Sbjct: 227 PYQGLSNEQV---LRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKE 283
Query: 481 SIE 483
+E
Sbjct: 284 EME 286
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 124/268 (46%), Gaps = 41/268 (15%)
Query: 230 VAVKVMKNLKDNGEEFINEVASISRT-----SHVNIVPFLGFCYEKKKRALIYEFMPNGS 284
VAVK++K+ D E+ ++++ S H NI+ LG C + +I E+ G+
Sbjct: 62 VAVKMLKD--DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 119
Query: 285 LDQYIYDHE------SSNGKRTLEWRTVYQIAVG----IARGLEYLHRGCNIRIVHLDIK 334
L +Y+ S + R E + ++ V +ARG+EYL + + +H D+
Sbjct: 120 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLA 176
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE-VFCRHFGGVSHKSD 393
N+ + E+ KI+DFGLA+ + + + R ++APE +F R + +H+SD
Sbjct: 177 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY---THQSD 233
Query: 394 VYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQL--DGVVTEEEKEMAK 451
V+S+G+++ E+ + Y I E F+L +G ++
Sbjct: 234 VWSFGVLMWEIFT---------------LGGSPYPGIPVEELFKLLKEGHRMDKPANCTN 278
Query: 452 KMILVSLWCIQTHPPDRPSMTKVVEMLE 479
++ ++ C P RP+ ++VE L+
Sbjct: 279 ELYMMMRDCWHAVPSQRPTFKQLVEDLD 306
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 134/303 (44%), Gaps = 42/303 (13%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTL-------PDGRLVAVKVMKNLKDNGE--EFINEV 249
+V R + S +LGQG + VY+G P+ R VA+K + E EF+NE
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 64
Query: 250 ASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIY----DHESSNGKRTLEWRT 305
+ + + ++V LG + + +I E M G L Y+ + E++
Sbjct: 65 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 124
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+ Q+A IA G+ YL+ + VH D+ N + EDF KI DFG+ + + +
Sbjct: 125 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDX--- 178
Query: 366 MLDTRGTAG-----YIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSE 420
+G G +++PE G + SDV+S+G+++ E+ + + +
Sbjct: 179 --XRKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVLWEI----------ATLAEQ 224
Query: 421 YFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEG 480
+ +Q+ F ++G + ++ ++ + C Q +P RPS +++ ++
Sbjct: 225 PYQGLSNEQV---LRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKE 281
Query: 481 SIE 483
+E
Sbjct: 282 EME 284
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 110/237 (46%), Gaps = 26/237 (10%)
Query: 207 FSDKLGQGGYADVYKG-TLPDGRLVAVKVMKN---LKDNGEEFIN-EVASISRTSHVNIV 261
F LG+G ++ V L R A+K+++ +K+N ++ E +SR H V
Sbjct: 41 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 100
Query: 262 PFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
L FC++ ++ + NG L +YI S + E T + A I LEYL
Sbjct: 101 K-LYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-----ETCTRFYTA-EIVSALEYL 153
Query: 321 H-RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
H +G I+H D+KP NI L+ED +I+DFG AK + GTA Y++PE
Sbjct: 154 HGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 209
Query: 380 VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
+ SD+++ G +I+++V G +EY K I+ EYDF
Sbjct: 210 LLTEK--SACKSSDLWALGCIIYQLVAGLP----PFRAGNEYL--IFQKIIKLEYDF 258
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 123/273 (45%), Gaps = 39/273 (14%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 129
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
R++H DIKP N+ L KI+DFG + D GT Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD----DLCGTLDYLPPEM----I 181
Query: 386 GGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVT 443
G H K D++S G++ +E ++G+ + + YK+I + +F VT
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRI-SRVEFTFPDFVT 233
Query: 444 EEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
E +++ ++ ++ +P RP + +V+E
Sbjct: 234 EGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 43/274 (15%)
Query: 200 VRRMTKSFSDK------LGQGGYADVY--KGTLPDGRLVAVKVMKNL----KDNGEEFIN 247
V+ T FSD+ LG+G + +V K + G+ AVKV+ K + E +
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLR 75
Query: 248 EVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSL-DQYIYDHESSNGKRTLEWRTV 306
EV + + H NI+ F +K L+ E G L D+ I S R +
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RII 132
Query: 307 YQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLD---EDFCPKISDFGLAKQTEKKESF 363
Q+ GI Y+H+ +IVH D+KP N+ L+ +D +I DFGL+ E +
Sbjct: 133 RQVLSGIT----YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK- 184
Query: 364 ISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFP 423
M D GTA YIAPEV G K DV+S G++++ ++ G + ++EY
Sbjct: 185 --MKDKIGTAYYIAPEVL---HGTYDEKCDVWSTGVILYILLSGCP----PFNGANEY-- 233
Query: 424 NAIYKQIET-EYDFQLD--GVVTEEEKEMAKKMI 454
I K++E +Y F+L V+E K++ +KM+
Sbjct: 234 -DILKKVEKGKYTFELPQWKKVSESAKDLIRKML 266
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 43/274 (15%)
Query: 200 VRRMTKSFSDK------LGQGGYADVY--KGTLPDGRLVAVKVMKNL----KDNGEEFIN 247
V+ T FSD+ LG+G + +V K + G+ AVKV+ K + E +
Sbjct: 23 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLR 81
Query: 248 EVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSL-DQYIYDHESSNGKRTLEWRTV 306
EV + + H NI+ F +K L+ E G L D+ I S R +
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RII 138
Query: 307 YQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLD---EDFCPKISDFGLAKQTEKKESF 363
Q+ GI Y+H+ +IVH D+KP N+ L+ +D +I DFGL+ E +
Sbjct: 139 RQVLSGIT----YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK- 190
Query: 364 ISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFP 423
M D GTA YIAPEV G K DV+S G++++ ++ G + ++EY
Sbjct: 191 --MKDKIGTAYYIAPEVL---HGTYDEKCDVWSTGVILYILLSGCP----PFNGANEY-- 239
Query: 424 NAIYKQIET-EYDFQLDGV--VTEEEKEMAKKMI 454
I K++E +Y F+L V+E K++ +KM+
Sbjct: 240 -DILKKVEKGKYTFELPQWKKVSESAKDLIRKML 272
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 100/202 (49%), Gaps = 17/202 (8%)
Query: 211 LGQGGYADVYKGTL--PDGR--LVAVKVMKN--LKDNGEEFINEVASISRTSHVNIVPFL 264
+G G +V G L P R VA+K +K + +F++E + + + H NI+
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
G + ++ E+M NGSLD ++ H +G+ T+ + + G+ G+ YL
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTH---DGQFTI--MQLVGMLRGVGAGMRYL---S 168
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKK-ESFISMLDTRGTAGYIAPEVFCR 383
++ VH D+ N+ +D + K+SDFGL++ E ++ + + + APE
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA- 227
Query: 384 HFGGVSHKSDVYSYGMMIHEMV 405
F S SDV+S+G+++ E++
Sbjct: 228 -FRTFSSASDVWSFGVVMWEVL 248
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 124/268 (46%), Gaps = 41/268 (15%)
Query: 230 VAVKVMKNLKDNGEEFINEVASISRT-----SHVNIVPFLGFCYEKKKRALIYEFMPNGS 284
VAVK++K+ D E+ ++++ S H NI+ LG C + +I E+ G+
Sbjct: 116 VAVKMLKD--DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 173
Query: 285 LDQYIYDHE------SSNGKRTLEWRTVYQIAVG----IARGLEYLHRGCNIRIVHLDIK 334
L +Y+ S + R E + ++ V +ARG+EYL + + +H D+
Sbjct: 174 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLA 230
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE-VFCRHFGGVSHKSD 393
N+ + E+ KI+DFGLA+ + + + R ++APE +F R + +H+SD
Sbjct: 231 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY---THQSD 287
Query: 394 VYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQL--DGVVTEEEKEMAK 451
V+S+G+++ E+ + Y I E F+L +G ++
Sbjct: 288 VWSFGVLMWEIFT---------------LGGSPYPGIPVEELFKLLKEGHRMDKPANCTN 332
Query: 452 KMILVSLWCIQTHPPDRPSMTKVVEMLE 479
++ ++ C P RP+ ++VE L+
Sbjct: 333 ELYMMMRDCWHAVPSQRPTFKQLVEDLD 360
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 132/303 (43%), Gaps = 42/303 (13%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTL-------PDGRLVAVKVMKNLKDNGE--EFINEV 249
+V R + S +LGQG + VY+G P+ R VA+K + E EF+NE
Sbjct: 11 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 69
Query: 250 ASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTL----EWRT 305
+ + + ++V LG + + +I E M G L Y+ + +
Sbjct: 70 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 129
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+ Q+A IA G+ YL+ + VH D+ N + EDF KI DFG+ + + + +
Sbjct: 130 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-- 184
Query: 366 MLDTRGTAG-----YIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSE 420
+G G +++PE G + SDV+S+G+++ E+ + + +
Sbjct: 185 ---RKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVLWEI----------ATLAEQ 229
Query: 421 YFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEG 480
+ +Q+ F ++G + ++ + + C Q +P RPS +++ ++
Sbjct: 230 PYQGLSNEQV---LRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 286
Query: 481 SIE 483
+E
Sbjct: 287 EME 289
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 128/299 (42%), Gaps = 37/299 (12%)
Query: 200 VRRMTKSFSDKLGQGGYADVYKGTL------PDGRLVAVKVMKNLKDNG-EEFINEVASI 252
++R +LG+G + V+ D LVAVK +K+ ++F E +
Sbjct: 12 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELL 71
Query: 253 SRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDH----------ESSNGKRTLE 302
+ H +IV F G C + +++E+M +G L++++ H + K L
Sbjct: 72 TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 303 WRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKES 362
+ IA IA G+ YL + VH D+ N + + KI DFG+++ +
Sbjct: 132 LSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY 188
Query: 363 FISMLDTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
+ T ++ PE + R F + +SDV+S+G+++ E+ K ++S
Sbjct: 189 YRVGGHTMLPIRWMPPESIMYRKF---TTESDVWSFGVILWEIFTYGKQPWFQLS----- 240
Query: 422 FPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEG 480
N + T+ G V E + K++ V L C Q P R ++ ++ ++L
Sbjct: 241 --NTEVIECITQ------GRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHA 291
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 124/268 (46%), Gaps = 41/268 (15%)
Query: 230 VAVKVMKNLKDNGEEFINEVASISRT-----SHVNIVPFLGFCYEKKKRALIYEFMPNGS 284
VAVK++K+ D E+ ++++ S H NI+ LG C + +I E+ G+
Sbjct: 57 VAVKMLKD--DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGN 114
Query: 285 LDQYIYDHE------SSNGKRTLEWRTVYQIAVG----IARGLEYLHRGCNIRIVHLDIK 334
L +Y+ S + R E + ++ V +ARG+EYL + + +H D+
Sbjct: 115 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLT 171
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE-VFCRHFGGVSHKSD 393
N+ + E+ KI+DFGLA+ + + + R ++APE +F R + +H+SD
Sbjct: 172 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY---THQSD 228
Query: 394 VYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQL--DGVVTEEEKEMAK 451
V+S+G+++ E+ + Y I E F+L +G ++
Sbjct: 229 VWSFGVLMWEIFT---------------LGGSPYPGIPVEELFKLLKEGHRMDKPANCTN 273
Query: 452 KMILVSLWCIQTHPPDRPSMTKVVEMLE 479
++ ++ C P RP+ ++VE L+
Sbjct: 274 ELYMMMRDCWHAVPSQRPTFKQLVEDLD 301
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 137/326 (42%), Gaps = 52/326 (15%)
Query: 186 NYGSLAPKRFSYSD---VRRMTKSFSDKLGQGGYADVYKGTL-----PDGRL-VAVKVMK 236
+Y + P + Y++ R F LG G + V + T D L VAVK++K
Sbjct: 11 SYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK 70
Query: 237 NLK--DNGEEFINEVASISRT-SHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYI---- 289
+ D E ++E+ +S H NIV LG C +I E+ G L ++
Sbjct: 71 STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKA 130
Query: 290 -----------YDHESSNGK--RTLEWRTVYQIAVGIARGLEYL-HRGCNIRIVHLDIKP 335
D E + + R LE R + + +A+G+ +L + C +H D+
Sbjct: 131 EAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAA 186
Query: 336 HNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE-VF-CRHFGGVSHKSD 393
N+ L KI DFGLA+ ++I + R ++APE +F C + + +SD
Sbjct: 187 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY----TVQSD 242
Query: 394 VYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKM 453
V+SYG+++ E+ N + +S++ YK ++ DG + K +
Sbjct: 243 VWSYGILLWEIFSLGLNPYPGILVNSKF-----YKLVK-------DGYQMAQPAFAPKNI 290
Query: 454 ILVSLWCIQTHPPDRPSMTKVVEMLE 479
+ C P RP+ ++ L+
Sbjct: 291 YSIMQACWALEPTHRPTFQQICSFLQ 316
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 131/298 (43%), Gaps = 45/298 (15%)
Query: 206 SFSDKLGQGGYADVYK----GTLPDGRLVAVKV-MKNLKDNGEE-----FINEVASISRT 255
+ LG+G + V G D AV V +K LKD+ E ++E+ +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 256 -SHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHE------SSNGKRTLEWRTVYQ 308
H NI+ LG C + +I E+ G+L +Y+ S + R E + ++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 309 IAVG----IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFI 364
V +ARG+EYL + + +H D+ N+ + E+ KI+DFGLA+ +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 365 SMLDTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFP 423
+ R ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFT---------------LG 256
Query: 424 NAIYKQIETEYDFQL--DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
+ Y I E F+L +G ++ ++ ++ C P RP+ ++VE L+
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 132/298 (44%), Gaps = 45/298 (15%)
Query: 206 SFSDKLGQGGYADVYK----GTLPDGRLVAVKV-MKNLKDNGEE-----FINEVASISRT 255
+ LG+G + V G D AV V +K LKD+ E ++E+ +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 256 -SHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHE------SSNGKRTLEWRTVYQ 308
H NI+ LG C + +I E+ G+L +Y+ S + R E + ++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 309 IAVG----IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFI 364
V +ARG+EYL + + +H D+ N+ + E+ +I+DFGLA+ + +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYK 214
Query: 365 SMLDTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFP 423
+ R ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFT---------------LG 256
Query: 424 NAIYKQIETEYDFQL--DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
+ Y I E F+L +G ++ ++ ++ C P RP+ ++VE L+
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 43/274 (15%)
Query: 200 VRRMTKSFSDK------LGQGGYADVY--KGTLPDGRLVAVKVMKNL----KDNGEEFIN 247
V+ T FSD+ LG+G + +V K + G+ AVKV+ K + E +
Sbjct: 41 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLR 99
Query: 248 EVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSL-DQYIYDHESSNGKRTLEWRTV 306
EV + + H NI+ F +K L+ E G L D+ I S R +
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RII 156
Query: 307 YQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLD---EDFCPKISDFGLAKQTEKKESF 363
Q+ GI Y+H+ +IVH D+KP N+ L+ +D +I DFGL+ E +
Sbjct: 157 RQVLSGIT----YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK- 208
Query: 364 ISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFP 423
M D GTA YIAPEV G K DV+S G++++ ++ G + ++EY
Sbjct: 209 --MKDKIGTAYYIAPEVL---HGTYDEKCDVWSTGVILYILLSGCP----PFNGANEY-- 257
Query: 424 NAIYKQIET-EYDFQLD--GVVTEEEKEMAKKMI 454
I K++E +Y F+L V+E K++ +KM+
Sbjct: 258 -DILKKVEKGKYTFELPQWKKVSESAKDLIRKML 290
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 43/274 (15%)
Query: 200 VRRMTKSFSDK------LGQGGYADVY--KGTLPDGRLVAVKVMKNL----KDNGEEFIN 247
V+ T FSD+ LG+G + +V K + G+ AVKV+ K + E +
Sbjct: 40 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLR 98
Query: 248 EVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSL-DQYIYDHESSNGKRTLEWRTV 306
EV + + H NI+ F +K L+ E G L D+ I S R +
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RII 155
Query: 307 YQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLD---EDFCPKISDFGLAKQTEKKESF 363
Q+ GI Y+H+ +IVH D+KP N+ L+ +D +I DFGL+ E +
Sbjct: 156 RQVLSGIT----YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK- 207
Query: 364 ISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFP 423
M D GTA YIAPEV G K DV+S G++++ ++ G + ++EY
Sbjct: 208 --MKDKIGTAYYIAPEVL---HGTYDEKCDVWSTGVILYILLSGCP----PFNGANEY-- 256
Query: 424 NAIYKQIET-EYDFQLD--GVVTEEEKEMAKKMI 454
I K++E +Y F+L V+E K++ +KM+
Sbjct: 257 -DILKKVEKGKYTFELPQWKKVSESAKDLIRKML 289
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 126/303 (41%), Gaps = 46/303 (15%)
Query: 202 RMTKSFSDKLGQGGYADVYKGTLPD------GRLVAVKVMKNLKDNGEE--FINEVASIS 253
R F LG G + V T VAVK++K D+ E ++E+ ++
Sbjct: 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMT 103
Query: 254 RT-SHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDH---------ESSNGKR---- 299
+ SH NIV LG C LI+E+ G L Y+ E N KR
Sbjct: 104 QLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 163
Query: 300 ----TLEWRTVYQIAVGIARGLEYLH-RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLA 354
L + + A +A+G+E+L + C VH D+ N+ + KI DFGLA
Sbjct: 164 EDLNVLTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLA 219
Query: 355 KQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGV-SHKSDVYSYGMMIHEMVIGRKNADV 413
+ +++ + R ++APE F G+ + KSDV+SYG+++ E+ N
Sbjct: 220 RDIMSDSNYVVRGNARLPVKWMAPESL---FEGIYTIKSDVWSYGILLWEIFSLGVNPYP 276
Query: 414 KVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHP-PDRPSMT 472
+ + + YK I+ + TEE +I+ S W + P P++T
Sbjct: 277 GIPVDANF-----YKLIQNGFKMDQPFYATEE-----IYIIMQSCWAFDSRKRPSFPNLT 326
Query: 473 KVV 475
+
Sbjct: 327 SFL 329
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 131/298 (43%), Gaps = 45/298 (15%)
Query: 206 SFSDKLGQGGYADVYK----GTLPDGRLVAVKV-MKNLKDNGEE-----FINEVASISRT 255
+ LG+G + V G D AV V +K LKD+ E ++E+ +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 256 -SHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHE------SSNGKRTLEWRTVYQ 308
H NI+ LG C + +I E+ G+L +Y+ S + R E + ++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 309 IAVG----IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFI 364
V +ARG+EYL + + +H D+ N+ + E+ KI+DFGLA+ +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 365 SMLDTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFP 423
+ R ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFT---------------LG 256
Query: 424 NAIYKQIETEYDFQL--DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
+ Y I E F+L +G ++ ++ ++ C P RP+ ++VE L+
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 135/290 (46%), Gaps = 61/290 (21%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCYE 269
+G GG+ V+K DG+ V+K +K N E+ EV ++++ HVNIV + G C++
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTY---VIKRVKYNNEKAEREVKALAKLDHVNIVHYNG-CWD 74
Query: 270 ---------------KKKRALI--YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVG 312
K + L EF G+L+Q+I E G++ L+ ++
Sbjct: 75 GFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI---EKRRGEK-LDKVLALELFEQ 130
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT 372
I +G++Y+H + ++++ D+KP NI L + KI DFGL + ++GT
Sbjct: 131 ITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG---KRXRSKGT 184
Query: 373 AGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIET 432
Y++PE G + D+Y+ G+++ E++ C + + + + +
Sbjct: 185 LRYMSPEQISSQDYG--KEVDLYALGLILAELL---------HVCDTAFETSKFFTDLR- 232
Query: 433 EYDFQLDGVVTE----EEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
DG++++ +EK + +K+ + P DRP+ ++++ L
Sbjct: 233 ------DGIISDIFDKKEKTLLQKL-------LSKKPEDRPNTSEILRTL 269
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 210 KLGQGGYADVY--KGTLPDGRLVAVKVMK----NLKDNGEEFINEVASISRTSHVNIVPF 263
KLG G Y +V K L G A+K++K N ++EVA + + H NI+
Sbjct: 11 KLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 69
Query: 264 LGFCYEKKKRALIYEFMPNGSL-DQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
F +K+ L+ E G L D+ I + S + I + G YLH+
Sbjct: 70 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-------IMKQVLSGTTYLHK 122
Query: 323 GCNIRIVHLDIKPHNIRLD---EDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
IVH D+KP N+ L+ D KI DFGL+ E M + GTA YIAPE
Sbjct: 123 H---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG---KMKERLGTAYYIAPE 176
Query: 380 VFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
V + + K DV+S G++++ ++ G
Sbjct: 177 VLRKKY---DEKCDVWSCGVILYILLCG 201
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 44/295 (14%)
Query: 211 LGQGGYADVYKGTL--PDGRL----VAVKVMKNLKDNGE--EFINEVASISRTSHVNIVP 262
LG+G + V K T GR VAVK++K E + ++E + + +H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 263 FLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSN------------------GKRTLEWR 304
G C + LI E+ GSL ++ + +R L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 305 TVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFI 364
+ A I++G++YL +++VH D+ NI + E KISDFGL++ +++S +
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 365 SMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPN 424
R ++A E H + +SDV+S+G+++ E+V N + P
Sbjct: 208 KRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVTLGGNPYPGIP------PE 259
Query: 425 AIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
++ ++T + + +EE M + L C + P RP + + LE
Sbjct: 260 RLFNLLKTGHRMERPDNCSEE-------MYRLMLQCWKQEPDKRPVFADISKDLE 307
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 121/273 (44%), Gaps = 39/273 (14%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G + + + + +RT + T +A L Y H +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT------ELANALSYCH---S 131
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
R++H DIKP N+ L KI+DFG + GT Y+ PE+
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLXGTLDYLPPEM----I 183
Query: 386 GGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVT 443
G H K D++S G++ +E ++G+ + + YK+I + +F VT
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRI-SRVEFTFPDFVT 235
Query: 444 EEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
E +++ ++ ++ +P RP + +V+E
Sbjct: 236 EGARDLISRL-------LKHNPSQRPMLREVLE 261
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 126/274 (45%), Gaps = 41/274 (14%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 127
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLA-KQTEKKESFISMLDTRGTAGYIAPEVFCRH 384
R++H DIKP N+ L KI+DFG + + + +S GT Y+ PE+
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS-----GTLDYLPPEM---- 178
Query: 385 FGGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVV 442
G H K D++S G++ +E ++G+ + + YK+I + +F V
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRI-SRVEFTFPDFV 230
Query: 443 TEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
TE +++ ++ ++ +P RP + +V+E
Sbjct: 231 TEGARDLISRL-------LKHNPSQRPMLREVLE 257
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 134/303 (44%), Gaps = 42/303 (13%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTL-------PDGRLVAVKVMKNLKDNGE--EFINEV 249
+V R + S +LGQG + VY+G P+ R VA+K + E EF+NE
Sbjct: 12 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 70
Query: 250 ASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIY----DHESSNGKRTLEWRT 305
+ + + ++V LG + + +I E M G L Y+ + E++
Sbjct: 71 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 130
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+ Q+A IA G+ YL+ + VH D+ N + EDF KI DFG+ + + + +
Sbjct: 131 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-- 185
Query: 366 MLDTRGTAG-----YIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSE 420
+G G +++PE G + SDV+S+G+++ E+ + + +
Sbjct: 186 ---RKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVLWEI----------ATLAEQ 230
Query: 421 YFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEG 480
+ +Q+ F ++G + ++ + + C Q +P RPS +++ ++
Sbjct: 231 PYQGLSNEQV---LRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 287
Query: 481 SIE 483
+E
Sbjct: 288 EME 290
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 123/273 (45%), Gaps = 39/273 (14%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 126
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
R++H DIKP N+ L KI+DFG + + GT Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TELCGTLDYLPPEM----I 178
Query: 386 GGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVT 443
G H K D++S G++ +E ++G+ + + YK+I + +F VT
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRI-SRVEFTFPDFVT 230
Query: 444 EEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
E +++ ++ ++ +P RP + +V+E
Sbjct: 231 EGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 210 KLGQGGYADVY--KGTLPDGRLVAVKVMK----NLKDNGEEFINEVASISRTSHVNIVPF 263
KLG G Y +V K L G A+K++K N ++EVA + + H NI+
Sbjct: 28 KLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 86
Query: 264 LGFCYEKKKRALIYEFMPNGSL-DQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
F +K+ L+ E G L D+ I + S + I + G YLH+
Sbjct: 87 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-------IMKQVLSGTTYLHK 139
Query: 323 GCNIRIVHLDIKPHNIRLD---EDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
IVH D+KP N+ L+ D KI DFGL+ E M + GTA YIAPE
Sbjct: 140 H---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG---KMKERLGTAYYIAPE 193
Query: 380 VFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
V + + K DV+S G++++ ++ G
Sbjct: 194 VLRKKY---DEKCDVWSCGVILYILLCG 218
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 133/303 (43%), Gaps = 42/303 (13%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTL-------PDGRLVAVKVMKNLKDNGE--EFINEV 249
+V R + S +LGQG + VY+G P+ R VA+K + E EF+NE
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 73
Query: 250 ASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIY----DHESSNGKRTLEWRT 305
+ + + ++V LG + + +I E M G L Y+ + E++
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+ Q+A IA G+ YL+ + VH D+ N + EDF KI DFG+ + + +
Sbjct: 134 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDX--- 187
Query: 366 MLDTRGTAG-----YIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSE 420
+G G +++PE G + SDV+S+G+++ E+ + + +
Sbjct: 188 --XRKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVLWEI----------ATLAEQ 233
Query: 421 YFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEG 480
+ +Q+ F ++G + ++ + + C Q +P RPS +++ ++
Sbjct: 234 PYQGLSNEQV---LRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 290
Query: 481 SIE 483
+E
Sbjct: 291 EME 293
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 134/303 (44%), Gaps = 42/303 (13%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTL-------PDGRLVAVKVMKNLKDNGE--EFINEV 249
+V R + S +LGQG + VY+G P+ R VA+K + E EF+NE
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 72
Query: 250 ASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIY----DHESSNGKRTLEWRT 305
+ + + ++V LG + + +I E M G L Y+ + E++
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+ Q+A IA G+ YL+ + VH D+ N + EDF KI DFG+ + + + +
Sbjct: 133 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-- 187
Query: 366 MLDTRGTAG-----YIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSE 420
+G G +++PE G + SDV+S+G+++ E+ + + +
Sbjct: 188 ---RKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVLWEI----------ATLAEQ 232
Query: 421 YFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEG 480
+ +Q+ F ++G + ++ + + C Q +P RPS +++ ++
Sbjct: 233 PYQGLSNEQV---LRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 289
Query: 481 SIE 483
+E
Sbjct: 290 EME 292
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 134/303 (44%), Gaps = 42/303 (13%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTL-------PDGRLVAVKVMKNLKDNGE--EFINEV 249
+V R + S +LGQG + VY+G P+ R VA+K + E EF+NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 66
Query: 250 ASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIY----DHESSNGKRTLEWRT 305
+ + + ++V LG + + +I E M G L Y+ + E++
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+ Q+A IA G+ YL+ + VH D+ N + EDF KI DFG+ + + + +
Sbjct: 127 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-- 181
Query: 366 MLDTRGTAG-----YIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSE 420
+G G +++PE G + SDV+S+G+++ E+ + + +
Sbjct: 182 ---RKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVLWEI----------ATLAEQ 226
Query: 421 YFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEG 480
+ +Q+ F ++G + ++ + + C Q +P RPS +++ ++
Sbjct: 227 PYQGLSNEQV---LRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 283
Query: 481 SIE 483
+E
Sbjct: 284 EME 286
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 126/275 (45%), Gaps = 43/275 (15%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 129
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ--TEKKESFISMLDTRGTAGYIAPEVFCR 383
R++H DIKP N+ L KI+DFG + + ++ + LD Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLD------YLPPEM--- 180
Query: 384 HFGGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGV 441
G H K D++S G++ +E ++G+ + + YK+I + +F
Sbjct: 181 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRI-SRVEFTFPDF 231
Query: 442 VTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
VTE +++ ++ ++ +P RP + +V+E
Sbjct: 232 VTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 134/303 (44%), Gaps = 42/303 (13%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTL-------PDGRLVAVKVMKNLKDNGE--EFINEV 249
+V R + S +LGQG + VY+G P+ R VA+K + E EF+NE
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 73
Query: 250 ASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIY----DHESSNGKRTLEWRT 305
+ + + ++V LG + + +I E M G L Y+ + E++
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+ Q+A IA G+ YL+ + VH D+ N + EDF KI DFG+ + + + +
Sbjct: 134 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-- 188
Query: 366 MLDTRGTAG-----YIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSE 420
+G G +++PE G + SDV+S+G+++ E+ + + +
Sbjct: 189 ---RKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVLWEI----------ATLAEQ 233
Query: 421 YFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEG 480
+ +Q+ F ++G + ++ + + C Q +P RPS +++ ++
Sbjct: 234 PYQGLSNEQV---LRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 290
Query: 481 SIE 483
+E
Sbjct: 291 EME 293
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 123/273 (45%), Gaps = 39/273 (14%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 152
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
R++H DIKP N+ L KI+DFG + D GT Y+ PE+
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD----DLCGTLDYLPPEM----I 204
Query: 386 GGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVT 443
G H K D++S G++ +E ++G+ + + YK+I + +F VT
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRI-SRVEFTFPDFVT 256
Query: 444 EEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
E +++ ++ ++ +P RP + +V+E
Sbjct: 257 EGARDLISRL-------LKHNPSQRPMLREVLE 282
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 134/303 (44%), Gaps = 42/303 (13%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTL-------PDGRLVAVKVMKNLKDNGE--EFINEV 249
+V R + S +LGQG + VY+G P+ R VA+K + E EF+NE
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 72
Query: 250 ASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIY----DHESSNGKRTLEWRT 305
+ + + ++V LG + + +I E M G L Y+ + E++
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+ Q+A IA G+ YL+ + VH D+ N + EDF KI DFG+ + + + +
Sbjct: 133 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-- 187
Query: 366 MLDTRGTAG-----YIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSE 420
+G G +++PE G + SDV+S+G+++ E+ + + +
Sbjct: 188 ---RKGGKGLLPVRWMSPESL--KDGVFTTYSDVWSFGVVLWEI----------ATLAEQ 232
Query: 421 YFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEG 480
+ +Q+ F ++G + ++ + + C Q +P RPS +++ ++
Sbjct: 233 PYQGLSNEQV---LRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 289
Query: 481 SIE 483
+E
Sbjct: 290 EME 292
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 43/275 (15%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G + + + + +RT + T +A L Y H +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT------ELANALSYCH---S 131
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ--TEKKESFISMLDTRGTAGYIAPEVFCR 383
R++H DIKP N+ L KI+DFG + + ++ + LD Y+ PE+
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLD------YLPPEM--- 182
Query: 384 HFGGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGV 441
G H K D++S G++ +E ++G+ + YK+I + +F
Sbjct: 183 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-------QETYKRI-SRVEFTFPDF 233
Query: 442 VTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
VTE +++ ++ ++ +P RP + +V+E
Sbjct: 234 VTEGARDLISRL-------LKHNPSQRPMLREVLE 261
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 207 FSDKLGQGGYADVYKGTLPD-GRLVAVKVMKNLK--DNGEEFINEVASISRTSHVNIVPF 263
SD LGQG A+V++G G L A+KV N+ + + E + + +H NIV
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL 72
Query: 264 LGFCYEKKKR--ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
E R LI EF P GSL + + ++ G E+ V + VG G+ +L
Sbjct: 73 FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG---GMNHLR 129
Query: 322 RGCNIRIVHLDIKPHNIRL----DEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIA 377
IVH +IKP NI D K++DFG A++ E E F+ + GT Y+
Sbjct: 130 ENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLY---GTEEYLH 183
Query: 378 PEVFCRHFGGVSHKS------DVYSYGMMIHEMVIG 407
P+++ R H+ D++S G+ + G
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 107/236 (45%), Gaps = 24/236 (10%)
Query: 207 FSDKLGQGGYADVYKG-TLPDGRLVAVKVMKN---LKDNGEEFIN-EVASISRTSHVNIV 261
F LG+G ++ V L R A+K+++ +K+N ++ E +SR H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 262 PFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
+ +K + NG L +YI S + E T + A I LEYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFD-----ETCTRFYTA-EIVSALEYLH 149
Query: 322 -RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
+G I+H D+KP NI L+ED +I+DFG AK + GTA Y++PE+
Sbjct: 150 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 205
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
S SD+++ G +I+++V G +EY K I+ EYDF
Sbjct: 206 LTEK--SASKSSDLWALGCIIYQLVAGLP----PFRAGNEYL--IFQKIIKLEYDF 253
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 131/316 (41%), Gaps = 41/316 (12%)
Query: 186 NYGSLAPKRFSYSD---VRRMTKSFSDKLGQGGYADVYKGTL-----PDGRL-VAVKVMK 236
+Y + P + Y++ R F LG G + V + T D L VAVK++K
Sbjct: 26 SYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK 85
Query: 237 NLK--DNGEEFINEVASISRT-SHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIY--- 290
+ D E ++E+ +S H NIV LG C +I E+ G L ++
Sbjct: 86 STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS 145
Query: 291 -----DHESSNGKRTLEWRTVYQIAVGIARGLEYL-HRGCNIRIVHLDIKPHNIRLDEDF 344
D + T R + + +A+G+ +L + C +H D+ N+ L
Sbjct: 146 RVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGH 201
Query: 345 CPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGV-SHKSDVYSYGMMIHE 403
KI DFGLA+ ++I + R ++APE F V + +SDV+SYG+++ E
Sbjct: 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESI---FDCVYTVQSDVWSYGILLWE 258
Query: 404 MVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQT 463
+ N + +S++ YK ++ DG + K + + C
Sbjct: 259 IFSLGLNPYPGILVNSKF-----YKLVK-------DGYQMAQPAFAPKNIYSIMQACWAL 306
Query: 464 HPPDRPSMTKVVEMLE 479
P RP+ ++ L+
Sbjct: 307 EPTHRPTFQQICSFLQ 322
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 126/293 (43%), Gaps = 47/293 (16%)
Query: 211 LGQGGYADVYKG------TLPDGRLVAVKVMKNLKDNGEE--FINEVASISRTSH-VNIV 261
LG+G + V + R VAVK++K + E ++E+ + H +N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 262 PFLGFCYEKK-KRALIYEFMPNGSLDQYIYDHESS------------NGKRTLEWRTVYQ 308
LG C + +I EF G+L Y+ + TLE Y
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 309 IAVGIARGLEYL-HRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML 367
V A+G+E+L R C +H D+ NI L E KI DFGLA+ K ++
Sbjct: 192 FQV--AKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 245
Query: 368 DTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAI 426
D R ++APE +F R + + +SDV+S+G+++ E+ S + +P
Sbjct: 246 DARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI----------FSLGASPYPGV- 291
Query: 427 YKQIETEYDFQL-DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
+I+ E+ +L +G +M L C P RP+ +++VE L
Sbjct: 292 --KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 126/275 (45%), Gaps = 43/275 (15%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 126
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ--TEKKESFISMLDTRGTAGYIAPEVFCR 383
R++H DIKP N+ L KI+DFG + + ++ + LD Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLD------YLPPEM--- 177
Query: 384 HFGGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGV 441
G H K D++S G++ +E ++G+ + + YK+I + +F
Sbjct: 178 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRI-SRVEFTFPDF 228
Query: 442 VTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
VTE +++ ++ ++ +P RP + +V+E
Sbjct: 229 VTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 126/275 (45%), Gaps = 43/275 (15%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 126
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ--TEKKESFISMLDTRGTAGYIAPEVFCR 383
R++H DIKP N+ L KI+DFG + + ++ + LD Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLD------YLPPEM--- 177
Query: 384 HFGGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGV 441
G H K D++S G++ +E ++G+ + + YK+I + +F
Sbjct: 178 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRI-SRVEFTFPDF 228
Query: 442 VTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
VTE +++ ++ ++ +P RP + +V+E
Sbjct: 229 VTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 43/275 (15%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 131
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ--TEKKESFISMLDTRGTAGYIAPEVFCR 383
R++H DIKP N+ L KI+DFG + + ++ + LD Y+ PE
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLD------YLPPEX--- 182
Query: 384 HFGGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGV 441
G H K D++S G++ +E ++G+ + YK+I + +F
Sbjct: 183 -IEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTY-------QETYKRI-SRVEFTFPDF 233
Query: 442 VTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
VTE +++ ++ ++ +P RP + +V+E
Sbjct: 234 VTEGARDLISRL-------LKHNPSQRPXLREVLE 261
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 111/221 (50%), Gaps = 29/221 (13%)
Query: 199 DVRRMTKSFS--DKLGQGGYADVYKGTLPD-GRLVAVKVMK-NLKDNGEEFIN-----EV 249
DV+ K + D LG+G +A VYK + ++VA+K +K + ++ IN E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 250 ASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQI 309
+ SH NI+ L K +L+++FM L+ I D+ L +
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNS-----LVLTPSHIKAY 117
Query: 310 AVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ-TEKKESFISMLD 368
+ +GLEYLH+ I+H D+KP+N+ LDE+ K++DFGLAK ++ +
Sbjct: 118 MLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV 174
Query: 369 TRGTAGYIAPEVF--CRHFG-GVSHKSDVYSYGMMIHEMVI 406
TR Y APE+ R +G GV D+++ G ++ E+++
Sbjct: 175 TR---WYRAPELLFGARMYGVGV----DMWAVGCILAELLL 208
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 126/275 (45%), Gaps = 43/275 (15%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 129
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ--TEKKESFISMLDTRGTAGYIAPEVFCR 383
R++H DIKP N+ L KI+DFG + + ++ + LD Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLD------YLPPEM--- 180
Query: 384 HFGGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGV 441
G H K D++S G++ +E ++G+ + + YK+I + +F
Sbjct: 181 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRI-SRVEFTFPDF 231
Query: 442 VTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
VTE +++ ++ ++ +P RP + +V+E
Sbjct: 232 VTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 126/275 (45%), Gaps = 43/275 (15%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 125
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ--TEKKESFISMLDTRGTAGYIAPEVFCR 383
R++H DIKP N+ L KI+DFG + + ++ + LD Y+ PE+
Sbjct: 126 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLD------YLPPEM--- 176
Query: 384 HFGGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGV 441
G H K D++S G++ +E ++G+ + + YK+I + +F
Sbjct: 177 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRI-SRVEFTFPDF 227
Query: 442 VTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
VTE +++ ++ ++ +P RP + +V+E
Sbjct: 228 VTEGARDLISRL-------LKHNPSQRPMLREVLE 255
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 122/273 (44%), Gaps = 39/273 (14%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 126
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
R++H DIKP N+ L KI+DFG + GT Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEM----I 178
Query: 386 GGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVT 443
G H K D++S G++ +E ++G+ + + YK+I + +F VT
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRI-SRVEFTFPDFVT 230
Query: 444 EEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
E +++ ++ ++ +P RP + +V+E
Sbjct: 231 EGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 125/275 (45%), Gaps = 43/275 (15%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 131
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ--TEKKESFISMLDTRGTAGYIAPEVFCR 383
R++H DIKP N+ L KI+DFG + + ++ + LD Y+ PE+
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLD------YLPPEM--- 182
Query: 384 HFGGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGV 441
G H K D++S G++ +E ++G+ + YK+I + +F
Sbjct: 183 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-------QETYKRI-SRVEFTFPDF 233
Query: 442 VTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
VTE +++ ++ ++ +P RP + +V+E
Sbjct: 234 VTEGARDLISRL-------LKHNPSQRPMLREVLE 261
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 23/204 (11%)
Query: 210 KLGQGGYADVYKGTLPDGRLVAVKVMKNLK--DNGEEFINEVASISRTSHVNIVPFLGFC 267
+LG G + VYK + ++A + + K + E+++ E+ ++ H NIV L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 268 YEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIR 327
Y + ++ EF G++D + + E R L + + L YLH +
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELE-----RPLTESQIQVVCKQTLDALNYLHDN---K 155
Query: 328 IVHLDIKPHNIRLDEDFCPKISDFGL-AKQT---EKKESFISMLDTRGTAGYIAPE-VFC 382
I+H D+K NI D K++DFG+ AK T ++++SFI GT ++APE V C
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI------GTPYWMAPEVVMC 209
Query: 383 RHFGG--VSHKSDVYSYGMMIHEM 404
+K+DV+S G+ + EM
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 121/273 (44%), Gaps = 39/273 (14%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 128
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
R++H DIKP N+ L KI+DFG + GT Y+ PE+
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEM----I 180
Query: 386 GGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVT 443
G H K D++S G++ +E ++G+ + YK+I + +F VT
Sbjct: 181 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-------QETYKRI-SRVEFTFPDFVT 232
Query: 444 EEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
E +++ ++ ++ +P RP + +V+E
Sbjct: 233 EGARDLISRL-------LKHNPSQRPMLREVLE 258
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 126/275 (45%), Gaps = 43/275 (15%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 130
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ--TEKKESFISMLDTRGTAGYIAPEVFCR 383
R++H DIKP N+ L KI+DFG + + ++ + LD Y+ PE+
Sbjct: 131 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLD------YLPPEM--- 181
Query: 384 HFGGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGV 441
G H K D++S G++ +E ++G+ + + YK+I + +F
Sbjct: 182 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRI-SRVEFTFPDF 232
Query: 442 VTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
VTE +++ ++ ++ +P RP + +V+E
Sbjct: 233 VTEGARDLISRL-------LKHNPSQRPMLREVLE 260
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 131/298 (43%), Gaps = 45/298 (15%)
Query: 206 SFSDKLGQGGYADVYK----GTLPDGRLVAVKV-MKNLKDNGEE-----FINEVASISRT 255
+ LG+G + V G D AV V +K LKD+ E ++E+ +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 256 -SHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHE------SSNGKRTLEWRTVYQ 308
H NI+ LG C + +I + G+L +Y+ S + R E + ++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 309 IAVG----IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFI 364
V +ARG+EYL + + +H D+ N+ + E+ KI+DFGLA+ + +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 365 SMLDTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFP 423
+ R ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFT---------------LG 256
Query: 424 NAIYKQIETEYDFQL--DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
+ Y I E F+L +G ++ ++ ++ C P RP+ ++VE L+
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 23/204 (11%)
Query: 210 KLGQGGYADVYKGTLPDGRLVAVKVMKNLK--DNGEEFINEVASISRTSHVNIVPFLGFC 267
+LG G + VYK + ++A + + K + E+++ E+ ++ H NIV L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 268 YEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIR 327
Y + ++ EF G++D + + E R L + + L YLH +
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELE-----RPLTESQIQVVCKQTLDALNYLHDN---K 155
Query: 328 IVHLDIKPHNIRLDEDFCPKISDFGL-AKQT---EKKESFISMLDTRGTAGYIAPE-VFC 382
I+H D+K NI D K++DFG+ AK T ++++SFI GT ++APE V C
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI------GTPYWMAPEVVMC 209
Query: 383 RHFGG--VSHKSDVYSYGMMIHEM 404
+K+DV+S G+ + EM
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 126/275 (45%), Gaps = 43/275 (15%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 129
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ--TEKKESFISMLDTRGTAGYIAPEVFCR 383
R++H DIKP N+ L KI+DFG + + ++ + LD Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLD------YLPPEM--- 180
Query: 384 HFGGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGV 441
G H K D++S G++ +E ++G+ + + YK+I + +F
Sbjct: 181 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRI-SRVEFTFPDF 231
Query: 442 VTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
VTE +++ ++ ++ +P RP + +V+E
Sbjct: 232 VTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 126/293 (43%), Gaps = 47/293 (16%)
Query: 211 LGQGGYADVYKG------TLPDGRLVAVKVMKNLKDNGEE--FINEVASISRTSH-VNIV 261
LG+G + V + R VAVK++K + E ++E+ + H +N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 262 PFLGFCYEKK-KRALIYEFMPNGSLDQYIYDHESS------------NGKRTLEWRTVYQ 308
LG C + +I EF G+L Y+ + TLE Y
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 309 IAVGIARGLEYL-HRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML 367
V A+G+E+L R C +H D+ NI L E KI DFGLA+ K ++
Sbjct: 146 FQV--AKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 368 DTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAI 426
D R ++APE +F R + + +SDV+S+G+++ E+ S + +P
Sbjct: 200 DARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI----------FSLGASPYPGV- 245
Query: 427 YKQIETEYDFQL-DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
+I+ E+ +L +G +M L C P RP+ +++VE L
Sbjct: 246 --KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 125/295 (42%), Gaps = 44/295 (14%)
Query: 211 LGQGGYADVYKGTL--PDGRL----VAVKVMKNLKDNGE--EFINEVASISRTSHVNIVP 262
LG+G + V K T GR VAVK++K E + ++E + + +H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 263 FLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSN------------------GKRTLEWR 304
G C + LI E+ GSL ++ + +R L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 305 TVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFI 364
+ A I++G++YL + +VH D+ NI + E KISDFGL++ +++S +
Sbjct: 151 DLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 365 SMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPN 424
R ++A E H + +SDV+S+G+++ E+V N + P
Sbjct: 208 KRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVTLGGNPYPGIP------PE 259
Query: 425 AIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
++ ++T + + +EE M + L C + P RP + + LE
Sbjct: 260 RLFNLLKTGHRMERPDNCSEE-------MYRLMLQCWKQEPDKRPVFADISKDLE 307
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 122/273 (44%), Gaps = 39/273 (14%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 126
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
R++H DIKP N+ L KI+DFG + GT Y+ PE+
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLC----GTLDYLPPEM----I 178
Query: 386 GGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVT 443
G H K D++S G++ +E ++G+ + + YK+I + +F VT
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRI-SRVEFTFPDFVT 230
Query: 444 EEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
E +++ ++ ++ +P RP + +V+E
Sbjct: 231 EGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 126/293 (43%), Gaps = 47/293 (16%)
Query: 211 LGQGGYADVYKG------TLPDGRLVAVKVMKNLKDNGEE--FINEVASISRTSH-VNIV 261
LG+G + V + R VAVK++K + E ++E+ + H +N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 262 PFLGFCYEKK-KRALIYEFMPNGSLDQYIYDHESS------------NGKRTLEWRTVYQ 308
LG C + +I EF G+L Y+ + TLE Y
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 309 IAVGIARGLEYL-HRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML 367
V A+G+E+L R C +H D+ NI L E KI DFGLA+ K ++
Sbjct: 146 FQV--AKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 368 DTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAI 426
D R ++APE +F R + + +SDV+S+G+++ E+ S + +P
Sbjct: 200 DARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI----------FSLGASPYPGV- 245
Query: 427 YKQIETEYDFQL-DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
+I+ E+ +L +G +M L C P RP+ +++VE L
Sbjct: 246 --KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 122/273 (44%), Gaps = 39/273 (14%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 129
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
R++H DIKP N+ L KI+DFG + GT Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEM----I 181
Query: 386 GGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVT 443
G H K D++S G++ +E ++G+ + + YK+I + +F VT
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRI-SRVEFTFPDFVT 233
Query: 444 EEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
E +++ ++ ++ +P RP + +V+E
Sbjct: 234 EGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 125/290 (43%), Gaps = 43/290 (14%)
Query: 211 LGQGGYADVYKG------TLPDGRLVAVKVMKNLKDNGEE--FINEVASISRTSH-VNIV 261
LG+G + V + R VAVK++K + E ++E+ + H +N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 262 PFLGFCYEKKKRAL-IYEFMPNGSLDQYIYDHESS----------NGKRTLEWRTVYQIA 310
LG C + + I EF G+L Y+ + TLE Y
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 311 VGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR 370
V A+G+E+L + + +H D+ NI L E KI DFGLA+ K + D R
Sbjct: 157 V--AKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 371 GTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQ 429
++APE +F R + + +SDV+S+G+++ E+ S + +P +
Sbjct: 212 LPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI----------FSLGASPYPGV---K 255
Query: 430 IETEYDFQL-DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
I+ E+ +L +G +M L C P RP+ +++VE L
Sbjct: 256 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 126/293 (43%), Gaps = 47/293 (16%)
Query: 211 LGQGGYADVYKG------TLPDGRLVAVKVMKNLKDNGEE--FINEVASISRTSH-VNIV 261
LG+G + V + R VAVK++K + E ++E+ + H +N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 262 PFLGFCYEKK-KRALIYEFMPNGSLDQYIYDHESS------------NGKRTLEWRTVYQ 308
LG C + +I EF G+L Y+ + TLE Y
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 309 IAVGIARGLEYL-HRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML 367
V A+G+E+L R C +H D+ NI L E KI DFGLA+ K ++
Sbjct: 155 FQV--AKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 208
Query: 368 DTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAI 426
D R ++APE +F R + + +SDV+S+G+++ E+ S + +P
Sbjct: 209 DARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI----------FSLGASPYPGV- 254
Query: 427 YKQIETEYDFQL-DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
+I+ E+ +L +G +M L C P RP+ +++VE L
Sbjct: 255 --KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 128/293 (43%), Gaps = 47/293 (16%)
Query: 211 LGQGGYADVYKG------TLPDGRLVAVKVMKNLKDNGEE--FINEVASISRTSH-VNIV 261
LG+G + V + R VAVK++K + E ++E+ + H +N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 262 PFLGFCYEKK-KRALIYEFMPNGSLDQYI---------YDHESSNGKR---TLEWRTVYQ 308
LG C + +I EF G+L Y+ Y + + TLE Y
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 309 IAVGIARGLEYL-HRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML 367
V A+G+E+L R C +H D+ NI L E KI DFGLA+ K ++
Sbjct: 157 FQV--AKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 210
Query: 368 DTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAI 426
D R ++APE +F R + + +SDV+S+G+++ E+ S + +P
Sbjct: 211 DARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI----------FSLGASPYPGV- 256
Query: 427 YKQIETEYDFQL-DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
+I+ E+ +L +G +M L C P RP+ +++VE L
Sbjct: 257 --KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 126/275 (45%), Gaps = 43/275 (15%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 152
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLA--KQTEKKESFISMLDTRGTAGYIAPEVFCR 383
R++H DIKP N+ L KI+DFG + + ++ + LD Y+ PE+
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLD------YLPPEM--- 203
Query: 384 HFGGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGV 441
G H K D++S G++ +E ++G+ + + YK+I + +F
Sbjct: 204 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRI-SRVEFTFPDF 254
Query: 442 VTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
VTE +++ ++ ++ +P RP + +V+E
Sbjct: 255 VTEGARDLISRL-------LKHNPSQRPMLREVLE 282
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 126/275 (45%), Gaps = 43/275 (15%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 143
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ--TEKKESFISMLDTRGTAGYIAPEVFCR 383
R++H DIKP N+ L KI+DFG + + ++ + LD Y+ PE+
Sbjct: 144 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLD------YLPPEM--- 194
Query: 384 HFGGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGV 441
G H K D++S G++ +E ++G+ + + YK+I + +F
Sbjct: 195 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRI-SRVEFTFPDF 245
Query: 442 VTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
VTE +++ ++ ++ +P RP + +V+E
Sbjct: 246 VTEGARDLISRL-------LKHNPSQRPMLREVLE 273
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 98/220 (44%), Gaps = 25/220 (11%)
Query: 211 LGQGGYADVYKGTLPDGRL----VAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPFL 264
LG+G Y +V L R+ VAVK+ MK D E E+ +H N+V F
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE-WRTVYQIAVGIARGLEYLHRG 323
G E + L E+ G L I E G + R +Q+ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLH-- 121
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAK--QTEKKESFISMLDTRGTAGYIAPEVF 381
I I H DIKP N+ LDE KISDFGLA + +E ++ + GT Y+APE+
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--XGTLPYVAPELL 178
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
R + DV+S G+++ M+ G D EY
Sbjct: 179 KRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 126/275 (45%), Gaps = 43/275 (15%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 123
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ--TEKKESFISMLDTRGTAGYIAPEVFCR 383
R++H DIKP N+ L KI+DFG + + ++ + LD Y+ PE+
Sbjct: 124 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLD------YLPPEM--- 174
Query: 384 HFGGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGV 441
G H K D++S G++ +E ++G+ + + YK+I + +F
Sbjct: 175 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRI-SRVEFTFPDF 225
Query: 442 VTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
VTE +++ ++ ++ +P RP + +V+E
Sbjct: 226 VTEGARDLISRL-------LKHNPSQRPMLREVLE 253
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 210 KLGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFI-NEVASISRTSHVNIVPFLGFC 267
K+G+G V T G+ VAVK M K E + NEV + H N+V
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 268 YEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIR 327
+ ++ EF+ G+L I H N ++ + + + + R L YLH N
Sbjct: 112 LVGDELWVVMEFLEGGALTD-IVTHTRMNEEQ------IATVCLSVLRALSYLH---NQG 161
Query: 328 IVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGG 387
++H DIK +I L D K+SDFG Q K+ L GT ++APEV R G
Sbjct: 162 VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXL--VGTPYWMAPEVISRLPYG 219
Query: 388 VSHKSDVYSYGMMIHEMVIG 407
+ D++S G+M+ EM+ G
Sbjct: 220 T--EVDIWSLGIMVIEMIDG 237
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 130/295 (44%), Gaps = 45/295 (15%)
Query: 210 KLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNG---EEFINEVASISRTSHVNIVPFLGF 266
+LG G V+K + LV + + +L+ + I E+ + + IV F G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 267 CYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNI 326
Y + ++ E M GSLDQ + R E + + ++++ + +GL YL
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVL-----KKAGRIPE-QILGKVSIAVIKGLTYLRE--KH 124
Query: 327 RIVHLDIKPHNIRLDEDFCPKISDFGLAKQT--EKKESFISMLDTRGTAGYIAPEVF-CR 383
+I+H D+KP NI ++ K+ DFG++ Q SF+ GT Y++PE
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPERLQGT 178
Query: 384 HFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVT 443
H+ S +SD++S G+ + EM +GR P K++E + Q++G
Sbjct: 179 HY---SVQSDIWSMGLSLVEMAVGRYP-----------IPPPDAKELELMFGCQVEGDAA 224
Query: 444 EEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSIENLQIPPKPSLSLPTG 498
E +S + + + PP + E+L+ + + PPK LP+G
Sbjct: 225 ETPPRPRTPGRPLSSYGMDSRPP-----MAIFELLDYIVN--EPPPK----LPSG 268
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 98/220 (44%), Gaps = 25/220 (11%)
Query: 211 LGQGGYADVYKGTLPDGRL----VAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPFL 264
LG+G Y +V L R+ VAVK+ MK D E E+ +H N+V F
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE-WRTVYQIAVGIARGLEYLHRG 323
G E + L E+ G L I E G + R +Q+ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLH-- 121
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAK--QTEKKESFISMLDTRGTAGYIAPEVF 381
I I H DIKP N+ LDE KISDFGLA + +E ++ + GT Y+APE+
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--XGTLPYVAPELL 178
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
R + DV+S G+++ M+ G D EY
Sbjct: 179 KRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEY 217
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 210 KLGQGGYADVYKGTLP-DGRLVAVKVMKNLKDNGEE-----FINEVASISRTS---HVNI 260
++G G Y VYK P G VA+K ++ NGEE + EVA + R H N+
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVR--VPNGEEGLPISTVREVALLRRLEAFEHPNV 68
Query: 261 VPFLGFCYEKK-----KRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIAR 315
V + C + K L++E +DQ + + L T+ + R
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFE-----HVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 316 GLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGY 375
GL++LH C IVH D+KP NI + K++DFGLA+ + +++ T Y
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALFPVVVTLWY 177
Query: 376 IAPEVFCRHFGGVSHKSDVYSYGMMIHEM 404
APEV + + D++S G + EM
Sbjct: 178 RAPEVLLQ--STYATPVDMWSVGCIFAEM 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 98/220 (44%), Gaps = 25/220 (11%)
Query: 211 LGQGGYADVYKGTLPDGRL----VAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPFL 264
LG+G Y +V L R+ VAVK+ MK D E E+ +H N+V F
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE-WRTVYQIAVGIARGLEYLHRG 323
G E + L E+ G L I E G + R +Q+ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLH-- 121
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAK--QTEKKESFISMLDTRGTAGYIAPEVF 381
I I H DIKP N+ LDE KISDFGLA + +E ++ + GT Y+APE+
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--XGTLPYVAPELL 178
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
R + DV+S G+++ M+ G D EY
Sbjct: 179 KRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 131/298 (43%), Gaps = 45/298 (15%)
Query: 206 SFSDKLGQGGYADVYK----GTLPDGRLVAVKV-MKNLKDNGEE-----FINEVASISRT 255
+ LG+G + V G D AV V +K LKD+ E ++E+ +
Sbjct: 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 97
Query: 256 -SHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHE------SSNGKRTLEWRTVYQ 308
H NI+ LG C + +I + G+L +Y+ S + R E + ++
Sbjct: 98 GKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 309 IAVG----IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFI 364
V +ARG+EYL + + +H D+ N+ + E+ KI+DFGLA+ + +
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 365 SMLDTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFP 423
+ R ++APE +F R + +H+SDV+S+G+++ E+
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFT---------------LG 256
Query: 424 NAIYKQIETEYDFQL--DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
+ Y I E F+L +G ++ ++ ++ C P RP+ ++VE L+
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 98/220 (44%), Gaps = 25/220 (11%)
Query: 211 LGQGGYADVYKGTLPDGRL----VAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPFL 264
LG+G Y +V L R+ VAVK+ MK D E E+ +H N+V F
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 71
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE-WRTVYQIAVGIARGLEYLHRG 323
G E + L E+ G L I E G + R +Q+ G+ YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLH-- 122
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAK--QTEKKESFISMLDTRGTAGYIAPEVF 381
I I H DIKP N+ LDE KISDFGLA + +E ++ + GT Y+APE+
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--XGTLPYVAPELL 179
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
R + DV+S G+++ M+ G D EY
Sbjct: 180 KRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 125/292 (42%), Gaps = 46/292 (15%)
Query: 211 LGQGGYADVYKG------TLPDGRLVAVKVMKNLKDNGEE--FINEVASISRTSH-VNIV 261
LG+G + V + R VAVK++K + E ++E+ + H +N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 262 PFLGFCYEKK-KRALIYEFMPNGSLDQYIYDHESS-----------NGKRTLEWRTVYQI 309
LG C + +I EF G+L Y+ + TLE Y
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 310 AVGIARGLEYL-HRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLD 368
V A+G+E+L R C +H D+ NI L E KI DFGLA+ K + D
Sbjct: 156 QV--AKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 369 TRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIY 427
R ++APE +F R + + +SDV+S+G+++ E+ S + +P
Sbjct: 210 ARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI----------FSLGASPYPGV-- 254
Query: 428 KQIETEYDFQL-DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
+I+ E+ +L +G +M L C P RP+ +++VE L
Sbjct: 255 -KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 98/220 (44%), Gaps = 25/220 (11%)
Query: 211 LGQGGYADVYKGTLPDGRL----VAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPFL 264
LG+G Y +V L R+ VAVK+ MK D E E+ +H N+V F
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE-WRTVYQIAVGIARGLEYLHRG 323
G E + L E+ G L I E G + R +Q+ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLH-- 121
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAK--QTEKKESFISMLDTRGTAGYIAPEVF 381
I I H DIKP N+ LDE KISDFGLA + +E ++ + GT Y+APE+
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--XGTLPYVAPELL 178
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
R + DV+S G+++ M+ G D EY
Sbjct: 179 KRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 127/275 (46%), Gaps = 43/275 (15%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 126
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ--TEKKESFISMLDTRGTAGYIAPEVFCR 383
+++H DIKP N+ L KI+DFG + + ++ + LD Y+ PE+
Sbjct: 127 KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLD------YLPPEM--- 177
Query: 384 HFGGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGV 441
G H K D++S G++ +E ++G+ + + YK+I + +F
Sbjct: 178 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDT-------YKRI-SRVEFTFPDF 228
Query: 442 VTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
VTE +++ ++ ++ +P RP + +V+E
Sbjct: 229 VTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 130/295 (44%), Gaps = 45/295 (15%)
Query: 210 KLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNG---EEFINEVASISRTSHVNIVPFLGF 266
+LG G V+K + LV + + +L+ + I E+ + + IV F G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 267 CYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNI 326
Y + ++ E M GSLDQ + R E + + ++++ + +GL YL
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVL-----KKAGRIPE-QILGKVSIAVIKGLTYLRE--KH 124
Query: 327 RIVHLDIKPHNIRLDEDFCPKISDFGLAKQT--EKKESFISMLDTRGTAGYIAPEVF-CR 383
+I+H D+KP NI ++ K+ DFG++ Q SF+ GT Y++PE
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPERLQGT 178
Query: 384 HFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVT 443
H+ S +SD++S G+ + EM +GR P K++E + Q++G
Sbjct: 179 HY---SVQSDIWSMGLSLVEMAVGRYP-----------IPPPDAKELELMFGCQVEGDAA 224
Query: 444 EEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSIENLQIPPKPSLSLPTG 498
E +S + + + PP + E+L+ + + PPK LP+G
Sbjct: 225 ETPPRPRTPGRPLSSYGMDSRPP-----MAIFELLDYIVN--EPPPK----LPSG 268
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 125/293 (42%), Gaps = 47/293 (16%)
Query: 211 LGQGGYADVYKG------TLPDGRLVAVKVMKNLKDNGEE--FINEVASISRTSH-VNIV 261
LG+G + V + R VAVK++K + E ++E+ + H +N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 262 PFLGFCYEKK-KRALIYEFMPNGSLDQYIYDHESS------------NGKRTLEWRTVYQ 308
LG C + +I EF G+L Y+ + TLE Y
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 309 IAVGIARGLEYL-HRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML 367
V A+G+E+L R C +H D+ NI L E KI DFGLA+ K +
Sbjct: 146 FQV--AKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 368 DTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAI 426
D R ++APE +F R + + +SDV+S+G+++ E+ S + +P
Sbjct: 200 DARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI----------FSLGASPYPGV- 245
Query: 427 YKQIETEYDFQL-DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
+I+ E+ +L +G +M L C P RP+ +++VE L
Sbjct: 246 --KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 121/281 (43%), Gaps = 36/281 (12%)
Query: 209 DKLGQGGYADVYKGTL--PDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSHVN 259
+KLG G + V +G P G+ V+V V K LK + ++FI EV ++ H N
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAV-KCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 260 IVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
++ G + ++ E P GSL + H+ G L T+ + AV +A G+ Y
Sbjct: 83 LIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQ---GHFLLG--TLSRYAVQVAEGMGY 136
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTA-GYIAP 378
L + R +H D+ N+ L KI DFGL + + + M + R + AP
Sbjct: 137 LE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 193
Query: 379 EVF-CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQ 437
E R F SH SD + +G+ + EM + + ++ S I +I+ E
Sbjct: 194 ESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ------ILHKIDKE---- 240
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
G ++ + + V + C P DRP+ + + L
Sbjct: 241 --GERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 279
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 130/295 (44%), Gaps = 45/295 (15%)
Query: 210 KLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNG---EEFINEVASISRTSHVNIVPFLGF 266
+LG G V+K + LV + + +L+ + I E+ + + IV F G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 267 CYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNI 326
Y + ++ E M GSLDQ + R E + + ++++ + +GL YL
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVL-----KKAGRIPE-QILGKVSIAVIKGLTYLRE--KH 124
Query: 327 RIVHLDIKPHNIRLDEDFCPKISDFGLAKQT--EKKESFISMLDTRGTAGYIAPEVF-CR 383
+I+H D+KP NI ++ K+ DFG++ Q SF+ GT Y++PE
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPERLQGT 178
Query: 384 HFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVT 443
H+ S +SD++S G+ + EM +GR P K++E + Q++G
Sbjct: 179 HY---SVQSDIWSMGLSLVEMAVGRYP-----------IPPPDAKELELMFGCQVEGDAA 224
Query: 444 EEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSIENLQIPPKPSLSLPTG 498
E +S + + + PP + E+L+ + + PPK LP+G
Sbjct: 225 ETPPRPRTPGRPLSSYGMDSRPP-----MAIFELLDYIVN--EPPPK----LPSG 268
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 130/295 (44%), Gaps = 45/295 (15%)
Query: 210 KLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNG---EEFINEVASISRTSHVNIVPFLGF 266
+LG G V+K + LV + + +L+ + I E+ + + IV F G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 267 CYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNI 326
Y + ++ E M GSLDQ + R E + + ++++ + +GL YL
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVL-----KKAGRIPE-QILGKVSIAVIKGLTYLRE--KH 124
Query: 327 RIVHLDIKPHNIRLDEDFCPKISDFGLAKQT--EKKESFISMLDTRGTAGYIAPEVF-CR 383
+I+H D+KP NI ++ K+ DFG++ Q SF+ GT Y++PE
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPERLQGT 178
Query: 384 HFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVT 443
H+ S +SD++S G+ + EM +GR P K++E + Q++G
Sbjct: 179 HY---SVQSDIWSMGLSLVEMAVGRYP-----------IPPPDAKELELMFGCQVEGDAA 224
Query: 444 EEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSIENLQIPPKPSLSLPTG 498
E +S + + + PP + E+L+ + + PPK LP+G
Sbjct: 225 ETPPRPRTPGRPLSSYGMDSRPP-----MAIFELLDYIVN--EPPPK----LPSG 268
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 99/220 (45%), Gaps = 25/220 (11%)
Query: 211 LGQGGYADVYKGTLPDGRL----VAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPFL 264
LG+G Y +V L R+ VAVK+ MK D E E+ + +H N+V F
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFY 71
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE-WRTVYQIAVGIARGLEYLHRG 323
G E + L E+ G L I E G + R +Q+ G+ YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLH-- 122
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAK--QTEKKESFISMLDTRGTAGYIAPEVF 381
I I H DIKP N+ LDE KISDFGLA + +E ++ + GT Y+APE+
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--CGTLPYVAPELL 179
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
R + DV+S G+++ M+ G D EY
Sbjct: 180 KRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 125/293 (42%), Gaps = 47/293 (16%)
Query: 211 LGQGGYADVYKG------TLPDGRLVAVKVMKNLKDNGEE--FINEVASISRTSH-VNIV 261
LG+G + V + R VAVK++K + E ++E+ + H +N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 262 PFLGFCYEKK-KRALIYEFMPNGSLDQYIYDHESS------------NGKRTLEWRTVYQ 308
LG C + +I EF G+L Y+ + TLE Y
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 309 IAVGIARGLEYL-HRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML 367
V A+G+E+L R C +H D+ NI L E KI DFGLA+ K +
Sbjct: 146 FQV--AKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 368 DTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAI 426
D R ++APE +F R + + +SDV+S+G+++ E+ S + +P
Sbjct: 200 DARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI----------FSLGASPYPGV- 245
Query: 427 YKQIETEYDFQL-DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
+I+ E+ +L +G +M L C P RP+ +++VE L
Sbjct: 246 --KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 210 KLGQGGYADVYKGTLP-DGRLVAVKVMKNLKDNGEE-----FINEVASISRTS---HVNI 260
++G G Y VYK P G VA+K ++ NGEE + EVA + R H N+
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVR--VPNGEEGLPISTVREVALLRRLEAFEHPNV 68
Query: 261 VPFLGFCYEKK-----KRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIAR 315
V + C + K L++E +DQ + + L T+ + R
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFE-----HVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 316 GLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGY 375
GL++LH C IVH D+KP NI + K++DFGLA+ + + ++ T Y
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVV---VTLWY 177
Query: 376 IAPEVFCRHFGGVSHKSDVYSYGMMIHEM 404
APEV + + D++S G + EM
Sbjct: 178 RAPEVLLQ--STYATPVDMWSVGCIFAEM 204
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 125/293 (42%), Gaps = 47/293 (16%)
Query: 211 LGQGGYADVYKG------TLPDGRLVAVKVMKNLKDNGEE--FINEVASISRTSH-VNIV 261
LG+G + V + R VAVK++K + E ++E+ + H +N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 262 PFLGFCYEKK-KRALIYEFMPNGSLDQYIYDHESS------------NGKRTLEWRTVYQ 308
LG C + +I EF G+L Y+ + TLE Y
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 309 IAVGIARGLEYL-HRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML 367
V A+G+E+L R C +H D+ NI L E KI DFGLA+ K +
Sbjct: 155 FQV--AKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 368 DTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAI 426
D R ++APE +F R + + +SDV+S+G+++ E+ S + +P
Sbjct: 209 DARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI----------FSLGASPYPGV- 254
Query: 427 YKQIETEYDFQL-DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
+I+ E+ +L +G +M L C P RP+ +++VE L
Sbjct: 255 --KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 121/281 (43%), Gaps = 36/281 (12%)
Query: 209 DKLGQGGYADVYKGTL--PDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSHVN 259
+KLG G + V +G P G+ V+V V K LK + ++FI EV ++ H N
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAV-KCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 260 IVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
++ G + ++ E P GSL + H+ G L T+ + AV +A G+ Y
Sbjct: 83 LIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQ---GHFLLG--TLSRYAVQVAEGMGY 136
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTA-GYIAP 378
L + R +H D+ N+ L KI DFGL + + + M + R + AP
Sbjct: 137 LE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 193
Query: 379 EVF-CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQ 437
E R F SH SD + +G+ + EM + + ++ S I +I+ E
Sbjct: 194 ESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ------ILHKIDKE---- 240
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
G ++ + + V + C P DRP+ + + L
Sbjct: 241 --GERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 279
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 207 FSDKLGQGGYADVYKG-TLPDGRLVAVKVMKN---LKDNGEEFIN-EVASISRTSHVNIV 261
F LG+G ++ V L R A+K+++ +K+N ++ E +SR H V
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 96
Query: 262 PFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
+ +K + NG L +YI S + E T + A I LEYLH
Sbjct: 97 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-----ETCTRFYTA-EIVSALEYLH 150
Query: 322 -RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
+G I+H D+KP NI L+ED +I+DFG AK + GTA Y++PE+
Sbjct: 151 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 206
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
SD+++ G +I+++V G +EY K I+ EYDF
Sbjct: 207 LTEK--SACKSSDLWALGCIIYQLVAGLP----PFRAGNEYL--IFQKIIKLEYDF 254
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 106/223 (47%), Gaps = 23/223 (10%)
Query: 207 FSDKLGQGG--YADVYKGTLPDGRLVAVK-VMKNLKDNGEEFINEVASISRTSHVNIVPF 263
F KLG+GG Y D+ +G L DG A+K ++ + + + EE E +H NI+
Sbjct: 33 FIQKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRL 91
Query: 264 LGFCYE----KKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ +C K + L+ F G+L I + G E + ++ + +GI RGLE
Sbjct: 92 VAYCLRERGAKHEAWLLLPFFKRGTLWNEI-ERLKDKGNFLTEDQILW-LLLGICRGLEA 149
Query: 320 LH-RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ----TEKKESFISMLD---TRG 371
+H +G H D+KP NI L ++ P + D G Q E +++ D R
Sbjct: 150 IHAKG----YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC 205
Query: 372 TAGYIAPEVF-CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADV 413
T Y APE+F + + ++DV+S G +++ M+ G D+
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 121/281 (43%), Gaps = 36/281 (12%)
Query: 209 DKLGQGGYADVYKGTL--PDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSHVN 259
+KLG G + V +G P G+ V+V V K LK + ++FI EV ++ H N
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAV-KCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 260 IVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
++ G + ++ E P GSL + H+ G L T+ + AV +A G+ Y
Sbjct: 77 LIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQ---GHFLLG--TLSRYAVQVAEGMGY 130
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTA-GYIAP 378
L + R +H D+ N+ L KI DFGL + + + M + R + AP
Sbjct: 131 LE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 379 EVF-CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQ 437
E R F SH SD + +G+ + EM + + ++ S I +I+ E
Sbjct: 188 ESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ------ILHKIDKE---- 234
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
G ++ + + V + C P DRP+ + + L
Sbjct: 235 --GERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 273
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 98/220 (44%), Gaps = 25/220 (11%)
Query: 211 LGQGGYADVYKGTLPDGRL----VAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPFL 264
LG+G Y +V L R+ VAVK+ MK D E E+ +H N+V F
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE-WRTVYQIAVGIARGLEYLHRG 323
G E + L E+ G L I E G + R +Q+ G+ YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLH-- 122
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAK--QTEKKESFISMLDTRGTAGYIAPEVF 381
I I H DIKP N+ LDE KISDFGLA + +E ++ + GT Y+APE+
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--CGTLPYVAPELL 179
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
R + DV+S G+++ M+ G D EY
Sbjct: 180 KRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 116/263 (44%), Gaps = 34/263 (12%)
Query: 210 KLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNG---EEFINEVASISRTSHVNIVPFLGF 266
+LG G V+K + LV + + +L+ + I E+ + + IV F G
Sbjct: 75 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 134
Query: 267 CYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNI 326
Y + ++ E M GSLDQ + R E + + ++++ + +GL YL
Sbjct: 135 FYSDGEISICMEHMDGGSLDQVL-----KKAGRIPE-QILGKVSIAVIKGLTYLRE--KH 186
Query: 327 RIVHLDIKPHNIRLDEDFCPKISDFGLAKQ--TEKKESFISMLDTRGTAGYIAPEVF-CR 383
+I+H D+KP NI ++ K+ DFG++ Q SF+ GT Y++PE
Sbjct: 187 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPERLQGT 240
Query: 384 HFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVT 443
H+ S +SD++S G+ + EM +GR P K++E + Q++G
Sbjct: 241 HY---SVQSDIWSMGLSLVEMAVGRYP-----------IPPPDAKELELMFGCQVEGDAA 286
Query: 444 EEEKEMAKKMILVSLWCIQTHPP 466
E +S + + + PP
Sbjct: 287 ETPPRPRTPGRPLSSYGMDSRPP 309
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 98/220 (44%), Gaps = 25/220 (11%)
Query: 211 LGQGGYADVYKGTLPDGRL----VAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPFL 264
LG+G Y +V L R+ VAVK+ MK D E E+ +H N+V F
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE-WRTVYQIAVGIARGLEYLHRG 323
G E + L E+ G L I E G + R +Q+ G+ YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLH-- 122
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAK--QTEKKESFISMLDTRGTAGYIAPEVF 381
I I H DIKP N+ LDE KISDFGLA + +E ++ + GT Y+APE+
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--CGTLPYVAPELL 179
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
R + DV+S G+++ M+ G D EY
Sbjct: 180 KRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 98/220 (44%), Gaps = 25/220 (11%)
Query: 211 LGQGGYADVYKGTLPDGRL----VAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPFL 264
LG+G Y +V L R+ VAVK+ MK D E E+ +H N+V F
Sbjct: 13 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 69
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE-WRTVYQIAVGIARGLEYLHRG 323
G E + L E+ G L I E G + R +Q+ G+ YLH
Sbjct: 70 GHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLH-- 120
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAK--QTEKKESFISMLDTRGTAGYIAPEVF 381
I I H DIKP N+ LDE KISDFGLA + +E ++ + GT Y+APE+
Sbjct: 121 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--CGTLPYVAPELL 177
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
R + DV+S G+++ M+ G D EY
Sbjct: 178 KRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 216
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 207 FSDKLGQGGYADVYKG-TLPDGRLVAVKVMKN---LKDNGEEFIN-EVASISRTSHVNIV 261
F LG+G ++ V L R A+K+++ +K+N ++ E +SR H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 262 PFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
+ +K + NG L +YI S + E T + A I LEYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-----ETCTRFYTA-EIVSALEYLH 149
Query: 322 -RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
+G I+H D+KP NI L+ED +I+DFG AK + GTA Y++PE+
Sbjct: 150 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
SD+++ G +I+++V G +EY K I+ EYDF
Sbjct: 206 LTEK--SACKSSDLWALGCIIYQLVAGLP----PFRAGNEYL--IFQKIIKLEYDF 253
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 98/220 (44%), Gaps = 25/220 (11%)
Query: 211 LGQGGYADVYKGTLPDGRL----VAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPFL 264
LG+G Y +V L R+ VAVK+ MK D E E+ +H N+V F
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE-WRTVYQIAVGIARGLEYLHRG 323
G E + L E+ G L I E G + R +Q+ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLH-- 121
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAK--QTEKKESFISMLDTRGTAGYIAPEVF 381
I I H DIKP N+ LDE KISDFGLA + +E ++ + GT Y+APE+
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--CGTLPYVAPELL 178
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
R + DV+S G+++ M+ G D EY
Sbjct: 179 KRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 98/220 (44%), Gaps = 25/220 (11%)
Query: 211 LGQGGYADVYKGTLPDGRL----VAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPFL 264
LG+G Y +V L R+ VAVK+ MK D E E+ +H N+V F
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE-WRTVYQIAVGIARGLEYLHRG 323
G E + L E+ G L I E G + R +Q+ G+ YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLH-- 122
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAK--QTEKKESFISMLDTRGTAGYIAPEVF 381
I I H DIKP N+ LDE KISDFGLA + +E ++ + GT Y+APE+
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--CGTLPYVAPELL 179
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
R + DV+S G+++ M+ G D EY
Sbjct: 180 KRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 98/220 (44%), Gaps = 25/220 (11%)
Query: 211 LGQGGYADVYKGTLPDGRL----VAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPFL 264
LG+G Y +V L R+ VAVK+ MK D E E+ +H N+V F
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE-WRTVYQIAVGIARGLEYLHRG 323
G E + L E+ G L I E G + R +Q+ G+ YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLH-- 122
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAK--QTEKKESFISMLDTRGTAGYIAPEVF 381
I I H DIKP N+ LDE KISDFGLA + +E ++ + GT Y+APE+
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--CGTLPYVAPELL 179
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
R + DV+S G+++ M+ G D EY
Sbjct: 180 KRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 98/220 (44%), Gaps = 25/220 (11%)
Query: 211 LGQGGYADVYKGTLPDGRL----VAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPFL 264
LG+G Y +V L R+ VAVK+ MK D E E+ +H N+V F
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE-WRTVYQIAVGIARGLEYLHRG 323
G E + L E+ G L I E G + R +Q+ G+ YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLH-- 122
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAK--QTEKKESFISMLDTRGTAGYIAPEVF 381
I I H DIKP N+ LDE KISDFGLA + +E ++ + GT Y+APE+
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--CGTLPYVAPELL 179
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
R + DV+S G+++ M+ G D EY
Sbjct: 180 KRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 119/281 (42%), Gaps = 36/281 (12%)
Query: 209 DKLGQGGYADVYKGTL--PDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSHVN 259
+KLG G + V +G P G+ V+V V K LK + ++FI EV ++ H N
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAV-KCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 260 IVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
++ G + ++ E P GSL + H+ TL + AV +A G+ Y
Sbjct: 73 LIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGY 126
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTA-GYIAP 378
L + R +H D+ N+ L KI DFGL + + + M + R + AP
Sbjct: 127 LE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 183
Query: 379 EVF-CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQ 437
E R F SH SD + +G+ + EM + + ++ S I +I+ E
Sbjct: 184 ESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ------ILHKIDKE---- 230
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
G ++ + + V + C P DRP+ + + L
Sbjct: 231 --GERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 207 FSDKLGQGGYADVYKG-TLPDGRLVAVKVMKN---LKDNGEEFIN-EVASISRTSHVNIV 261
F LG+G ++ V L R A+K+++ +K+N ++ E +SR H V
Sbjct: 39 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 98
Query: 262 PFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
+ +K + NG L +YI S + E T + A I LEYLH
Sbjct: 99 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-----ETCTRFYTA-EIVSALEYLH 152
Query: 322 -RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
+G I+H D+KP NI L+ED +I+DFG AK + GTA Y++PE+
Sbjct: 153 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 208
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
SD+++ G +I+++V G +EY K I+ EYDF
Sbjct: 209 LTEK--SACKSSDLWALGCIIYQLVAGLP----PFRAGNEYL--IFQKIIKLEYDF 256
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 98/220 (44%), Gaps = 25/220 (11%)
Query: 211 LGQGGYADVYKGTLPDGRL----VAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPFL 264
LG+G Y +V L R+ VAVK+ MK D E E+ +H N+V F
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE-WRTVYQIAVGIARGLEYLHRG 323
G E + L E+ G L I E G + R +Q+ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLH-- 121
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAK--QTEKKESFISMLDTRGTAGYIAPEVF 381
I I H DIKP N+ LDE KISDFGLA + +E ++ + GT Y+APE+
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--CGTLPYVAPELL 178
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
R + DV+S G+++ M+ G D EY
Sbjct: 179 KRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 98/220 (44%), Gaps = 25/220 (11%)
Query: 211 LGQGGYADVYKGTLPDGRL----VAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPFL 264
LG+G Y +V L R+ VAVK+ MK D E E+ +H N+V F
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE-WRTVYQIAVGIARGLEYLHRG 323
G E + L E+ G L I E G + R +Q+ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLH-- 121
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAK--QTEKKESFISMLDTRGTAGYIAPEVF 381
I I H DIKP N+ LDE KISDFGLA + +E ++ + GT Y+APE+
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--CGTLPYVAPELL 178
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
R + DV+S G+++ M+ G D EY
Sbjct: 179 KRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 98/220 (44%), Gaps = 25/220 (11%)
Query: 211 LGQGGYADVYKGTLPDGRL----VAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPFL 264
LG+G Y +V L R+ VAVK+ MK D E E+ +H N+V F
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE-WRTVYQIAVGIARGLEYLHRG 323
G E + L E+ G L I E G + R +Q+ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLH-- 121
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAK--QTEKKESFISMLDTRGTAGYIAPEVF 381
I I H DIKP N+ LDE KISDFGLA + +E ++ + GT Y+APE+
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--CGTLPYVAPELL 178
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
R + DV+S G+++ M+ G D EY
Sbjct: 179 KRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 207 FSDKLGQGGYADVYKG-TLPDGRLVAVKVMKN---LKDNGEEFIN-EVASISRTSHVNIV 261
F LG+G ++ V L R A+K+++ +K+N ++ E +SR H V
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 96
Query: 262 PFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
+ +K + NG L +YI S + E T + A I LEYLH
Sbjct: 97 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-----ETCTRFYTA-EIVSALEYLH 150
Query: 322 -RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
+G I+H D+KP NI L+ED +I+DFG AK + GTA Y++PE+
Sbjct: 151 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 206
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
SD+++ G +I+++V G +EY K I+ EYDF
Sbjct: 207 LTEK--SACKSSDLWALGCIIYQLVAGLP----PFRAGNEYL--IFQKIIKLEYDF 254
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 98/220 (44%), Gaps = 25/220 (11%)
Query: 211 LGQGGYADVYKGTLPDGRL----VAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPFL 264
LG+G Y +V L R+ VAVK+ MK D E E+ +H N+V F
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE-WRTVYQIAVGIARGLEYLHRG 323
G E + L E+ G L I E G + R +Q+ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLH-- 121
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAK--QTEKKESFISMLDTRGTAGYIAPEVF 381
I I H DIKP N+ LDE KISDFGLA + +E ++ + GT Y+APE+
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--CGTLPYVAPELL 178
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
R + DV+S G+++ M+ G D EY
Sbjct: 179 KRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 207 FSDKLGQGGYADVYKG-TLPDGRLVAVKVMKN---LKDNGEEFIN-EVASISRTSHVNIV 261
F LG+G ++ V L R A+K+++ +K+N ++ E +SR H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 262 PFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
+ +K + NG L +YI S + E T + A I LEYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-----ETCTRFYTA-EIVSALEYLH 149
Query: 322 -RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
+G I+H D+KP NI L+ED +I+DFG AK + GTA Y++PE+
Sbjct: 150 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
SD+++ G +I+++V G +EY K I+ EYDF
Sbjct: 206 LTEK--SACKSSDLWALGCIIYQLVAGLP----PFRAGNEYL--IFQKIIKLEYDF 253
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 207 FSDKLGQGGYADVYKG-TLPDGRLVAVKVMKN---LKDNGEEFIN-EVASISRTSHVNIV 261
F LG+G ++ V L R A+K+++ +K+N ++ E +SR H V
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 262 PFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
+ +K + NG L +YI S + E T + A I LEYLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-----ETCTRFYTA-EIVSALEYLH 147
Query: 322 -RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
+G I+H D+KP NI L+ED +I+DFG AK + GTA Y++PE+
Sbjct: 148 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPEL 203
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
SD+++ G +I+++V G +EY K I+ EYDF
Sbjct: 204 LTEK--SACKSSDLWALGCIIYQLVAGLP----PFRAGNEYL--IFQKIIKLEYDF 251
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 123/303 (40%), Gaps = 46/303 (15%)
Query: 211 LGQGGYADVYK----GTLP--DGRLVAVKVMKN--LKDNGEEFINEVASISRTSHVNIVP 262
+G+G + V++ G LP +VAVK++K D +F E A ++ + NIV
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 263 FLGFCYEKKKRALIYEFMPNGSLDQYIYDHE------------------SSNGKRTLEWR 304
LG C K L++E+M G L++++ SS G L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 305 TVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFI 364
IA +A G+ YL + VH D+ N + E+ KI+DFGL++ + +
Sbjct: 175 EQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 365 SMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPN 424
+ + ++ PE + + +SDV++YG+++ E+ Y
Sbjct: 232 ADGNDAIPIRWMPPESI--FYNRYTTESDVWAYGVVLWEIF--------------SYGLQ 275
Query: 425 AIYKQIETEYDFQL-DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSIE 483
Y E + + DG + + ++ + C P DRPS + +L+ E
Sbjct: 276 PYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335
Query: 484 NLQ 486
+
Sbjct: 336 RAE 338
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 98/220 (44%), Gaps = 25/220 (11%)
Query: 211 LGQGGYADVYKGTLPDGRL----VAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPFL 264
LG+G Y +V L R+ VAVK+ MK D E E+ +H N+V F
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE-WRTVYQIAVGIARGLEYLHRG 323
G E + L E+ G L I E G + R +Q+ G+ YLH
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLH-- 122
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAK--QTEKKESFISMLDTRGTAGYIAPEVF 381
I I H DIKP N+ LDE KISDFGLA + +E ++ + GT Y+APE+
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--CGTLPYVAPELL 179
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
R + DV+S G+++ M+ G D EY
Sbjct: 180 KRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 119/281 (42%), Gaps = 36/281 (12%)
Query: 209 DKLGQGGYADVYKGTL--PDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSHVN 259
+KLG G + V +G P G+ V+V V K LK + ++FI EV ++ H N
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAV-KCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 260 IVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
++ G + ++ E P GSL + H+ TL + AV +A G+ Y
Sbjct: 77 LIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGY 130
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTA-GYIAP 378
L + R +H D+ N+ L KI DFGL + + + M + R + AP
Sbjct: 131 LE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 379 EVF-CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQ 437
E R F SH SD + +G+ + EM + + ++ S I +I+ E
Sbjct: 188 ESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ------ILHKIDKE---- 234
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
G ++ + + V + C P DRP+ + + L
Sbjct: 235 --GERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 273
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 207 FSDKLGQGGYADVYKG-TLPDGRLVAVKVMKN---LKDNGEEFIN-EVASISRTSHVNIV 261
F LG+G ++ V L R A+K+++ +K+N ++ E +SR H V
Sbjct: 14 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 73
Query: 262 PFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
+ +K + NG L +YI S + E T + A I LEYLH
Sbjct: 74 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-----ETCTRFYTA-EIVSALEYLH 127
Query: 322 -RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
+G I+H D+KP NI L+ED +I+DFG AK + GTA Y++PE+
Sbjct: 128 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 183
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
SD+++ G +I+++V G +EY K I+ EYDF
Sbjct: 184 LTEK--SACKSSDLWALGCIIYQLVAGLP----PFRAGNEYL--IFQKIIKLEYDF 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 207 FSDKLGQGGYADVYKG-TLPDGRLVAVKVMKN---LKDNGEEFIN-EVASISRTSHVNIV 261
F LG+G ++ V L R A+K+++ +K+N ++ E +SR H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 262 PFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
+ +K + NG L +YI S + E T + A I LEYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-----ETCTRFYTA-EIVSALEYLH 149
Query: 322 -RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
+G I+H D+KP NI L+ED +I+DFG AK + GTA Y++PE+
Sbjct: 150 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
SD+++ G +I+++V G +EY K I+ EYDF
Sbjct: 206 LTEK--SACKSSDLWALGCIIYQLVAGLP----PFRAGNEYL--IFQKIIKLEYDF 253
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 98/220 (44%), Gaps = 25/220 (11%)
Query: 211 LGQGGYADVYKGTLPDGRL----VAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPFL 264
LG+G Y +V L R+ VAVK+ MK D E E+ +H N+V F
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE-WRTVYQIAVGIARGLEYLHRG 323
G E + L E+ G L I E G + R +Q+ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLH-- 121
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAK--QTEKKESFISMLDTRGTAGYIAPEVF 381
I I H DIKP N+ LDE KISDFGLA + +E ++ + GT Y+APE+
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--CGTLPYVAPELL 178
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
R + DV+S G+++ M+ G D EY
Sbjct: 179 KRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 207 FSDKLGQGGYADVYKG-TLPDGRLVAVKVMKN---LKDNGEEFIN-EVASISRTSHVNIV 261
F LG+G ++ V L R A+K+++ +K+N ++ E +SR H V
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 262 PFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
+ +K + NG L +YI S + E T + A I LEYLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-----ETCTRFYTA-EIVSALEYLH 147
Query: 322 -RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
+G I+H D+KP NI L+ED +I+DFG AK + GTA Y++PE+
Sbjct: 148 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
SD+++ G +I+++V G +EY K I+ EYDF
Sbjct: 204 LTEK--SACKSSDLWALGCIIYQLVAGLP----PFRAGNEYL--IFQKIIKLEYDF 251
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 126/275 (45%), Gaps = 43/275 (15%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 128
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ--TEKKESFISMLDTRGTAGYIAPEVFCR 383
R++H DIKP N+ L KI++FG + + ++ + LD Y+ PE+
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLD------YLPPEM--- 179
Query: 384 HFGGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGV 441
G H K D++S G++ +E ++G+ + + YK+I + +F
Sbjct: 180 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRI-SRVEFTFPDF 230
Query: 442 VTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
VTE +++ ++ ++ +P RP + +V+E
Sbjct: 231 VTEGARDLISRL-------LKHNPSQRPMLREVLE 258
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 207 FSDKLGQGGYADVYKG-TLPDGRLVAVKVMKN---LKDNGEEFIN-EVASISRTSHVNIV 261
F LG+G ++ V L R A+K+++ +K+N ++ E +SR H V
Sbjct: 11 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 70
Query: 262 PFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
+ +K + NG L +YI S + E T + A I LEYLH
Sbjct: 71 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-----ETCTRFYTA-EIVSALEYLH 124
Query: 322 -RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
+G I+H D+KP NI L+ED +I+DFG AK + GTA Y++PE+
Sbjct: 125 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 180
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
SD+++ G +I+++V G +EY K I+ EYDF
Sbjct: 181 LTEK--SACKSSDLWALGCIIYQLVAGLP----PFRAGNEYL--IFQKIIKLEYDF 228
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 207 FSDKLGQGGYADVYKG-TLPDGRLVAVKVMKN---LKDNGEEFIN-EVASISRTSHVNIV 261
F LG+G ++ V L R A+K+++ +K+N ++ E +SR H V
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 92
Query: 262 PFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
+ +K + NG L +YI S + T + I LEYLH
Sbjct: 93 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLH 146
Query: 322 -RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
+G I+H D+KP NI L+ED +I+DFG AK + GTA Y++PE+
Sbjct: 147 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 202
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
SD+++ G +I+++V G +EY K I+ EYDF
Sbjct: 203 LTEK--SACKSSDLWALGCIIYQLVAGLP----PFRAGNEYL--IFQKIIKLEYDF 250
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 119/281 (42%), Gaps = 36/281 (12%)
Query: 209 DKLGQGGYADVYKGTL--PDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSHVN 259
+KLG G + V +G P G+ V+V V K LK + ++FI EV ++ H N
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAV-KCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 260 IVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
++ G + ++ E P GSL + H+ TL + AV +A G+ Y
Sbjct: 73 LIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGY 126
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTA-GYIAP 378
L + R +H D+ N+ L KI DFGL + + + M + R + AP
Sbjct: 127 LE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 379 EVF-CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQ 437
E R F SH SD + +G+ + EM + + ++ S I +I+ E
Sbjct: 184 ESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ------ILHKIDKE---- 230
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
G ++ + + V + C P DRP+ + + L
Sbjct: 231 --GERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 98/220 (44%), Gaps = 25/220 (11%)
Query: 211 LGQGGYADVYKGTLPDGRL----VAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPFL 264
LG+G Y +V L R+ VAVK+ MK D E E+ +H N+V F
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE-WRTVYQIAVGIARGLEYLHRG 323
G E + L E+ G L I E G + R +Q+ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLH-- 121
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAK--QTEKKESFISMLDTRGTAGYIAPEVF 381
I I H DIKP N+ LDE KISDFGLA + +E ++ + GT Y+APE+
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--CGTLPYVAPELL 178
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
R + DV+S G+++ M+ G D EY
Sbjct: 179 KRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 126/275 (45%), Gaps = 43/275 (15%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCH---S 129
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ--TEKKESFISMLDTRGTAGYIAPEVFCR 383
R++H DIKP N+ L KI++FG + + ++ + LD Y+ PE+
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLD------YLPPEM--- 180
Query: 384 HFGGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGV 441
G H K D++S G++ +E ++G+ + + YK+I + +F
Sbjct: 181 -IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-------YKRI-SRVEFTFPDF 231
Query: 442 VTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
VTE +++ ++ ++ +P RP + +V+E
Sbjct: 232 VTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 207 FSDKLGQGGYADVYKG-TLPDGRLVAVKVMKN---LKDNGEEFIN-EVASISRTSHVNIV 261
F LG+G ++ V L R A+K+++ +K+N ++ E +SR H V
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 262 PFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
+ +K + NG L +YI S + E T + A I LEYLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-----ETCTRFYTA-EIVSALEYLH 147
Query: 322 -RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
+G I+H D+KP NI L+ED +I+DFG AK + GTA Y++PE+
Sbjct: 148 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
SD+++ G +I+++V G +EY K I+ EYDF
Sbjct: 204 LTEK--SACKSSDLWALGCIIYQLVAGLP----PFRAGNEYL--IFQKIIKLEYDF 251
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 207 FSDKLGQGGYADVYKG-TLPDGRLVAVKVMKN---LKDNGEEFIN-EVASISRTSHVNIV 261
F LG+G ++ V L R A+K+++ +K+N ++ E +SR H V
Sbjct: 13 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 72
Query: 262 PFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
+ +K + NG L +YI S + E T + A I LEYLH
Sbjct: 73 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-----ETCTRFYTA-EIVSALEYLH 126
Query: 322 -RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
+G I+H D+KP NI L+ED +I+DFG AK + GTA Y++PE+
Sbjct: 127 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 182
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
SD+++ G +I+++V G +EY K I+ EYDF
Sbjct: 183 LTEK--SACKSSDLWALGCIIYQLVAGLP----PFRAGNEYL--IFQKIIKLEYDF 230
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 210 KLGQGGYADVYKGTLPDGRLVAVKVMKNLK--DNGEEFINEVASISRTSHVNIVPFLGFC 267
+LG G + VYK + ++A + + K + E+++ E+ ++ H NIV L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 268 YEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIR 327
Y + ++ EF G++D + + E R L + + L YLH +
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELE-----RPLTESQIQVVCKQTLDALNYLHDN---K 155
Query: 328 IVHLDIKPHNIRLDEDFCPKISDFGL-AKQT---EKKESFISMLDTRGTAGYIAPE-VFC 382
I+H D+K NI D K++DFG+ AK T ++++ FI GT ++APE V C
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI------GTPYWMAPEVVMC 209
Query: 383 RHFGG--VSHKSDVYSYGMMIHEM 404
+K+DV+S G+ + EM
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 136/303 (44%), Gaps = 74/303 (24%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCYE 269
+G GG+ V+K DG+ V++ +K N E+ EV ++++ HVNIV + G C++
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTY---VIRRVKYNNEKAEREVKALAKLDHVNIVHYNG-CWD 75
Query: 270 ---------------------------KKKRALIY---EFMPNGSLDQYIYDHESSNGKR 299
+ K ++ EF G+L+Q+I E G++
Sbjct: 76 GFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI---EKRRGEK 132
Query: 300 TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEK 359
L+ ++ I +G++Y+H + +++H D+KP NI L + KI DFGL +
Sbjct: 133 -LDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKN 188
Query: 360 KESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSS 419
++GT Y++PE G + D+Y+ G+++ E++ C +
Sbjct: 189 DGKRTR---SKGTLRYMSPEQISSQDYG--KEVDLYALGLILAELL---------HVCDT 234
Query: 420 EYFPNAIYKQIETEYDFQLDGVVTE----EEKEMAKKMILVSLWCIQTHPPDRPSMTKVV 475
+ + + + DG++++ +EK + +K+ + P DRP+ ++++
Sbjct: 235 AFETSKFFTDLR-------DGIISDIFDKKEKTLLQKL-------LSKKPEDRPNTSEIL 280
Query: 476 EML 478
L
Sbjct: 281 RTL 283
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 207 FSDKLGQGGYADVYKG-TLPDGRLVAVKVMKN---LKDNGEEFIN-EVASISRTSHVNIV 261
F LG+G ++ V L R A+K+++ +K+N ++ E +SR H V
Sbjct: 12 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 71
Query: 262 PFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
+ +K + NG L +YI S + E T + A I LEYLH
Sbjct: 72 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-----ETCTRFYTA-EIVSALEYLH 125
Query: 322 -RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
+G I+H D+KP NI L+ED +I+DFG AK + GTA Y++PE+
Sbjct: 126 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 181
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
SD+++ G +I+++V G +EY K I+ EYDF
Sbjct: 182 LTEK--SACKSSDLWALGCIIYQLVAGLP----PFRAGNEYL--IFQKIIKLEYDF 229
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 119/281 (42%), Gaps = 36/281 (12%)
Query: 209 DKLGQGGYADVYKGTL--PDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSHVN 259
+KLG G + V +G P G+ V+V V K LK + ++FI EV ++ H N
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAV-KCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 260 IVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
++ G + ++ E P GSL + H+ TL + AV +A G+ Y
Sbjct: 73 LIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGY 126
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTA-GYIAP 378
L + R +H D+ N+ L KI DFGL + + + M + R + AP
Sbjct: 127 LE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 379 EVF-CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQ 437
E R F SH SD + +G+ + EM + + ++ S I +I+ E
Sbjct: 184 ESLKTRTF---SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ------ILHKIDKE---- 230
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
G ++ + + V + C P DRP+ + + L
Sbjct: 231 --GERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 125/293 (42%), Gaps = 47/293 (16%)
Query: 211 LGQGGYADVYKG------TLPDGRLVAVKVMKNLKDNGEE--FINEVASISRTSH-VNIV 261
LG+G + V + R VAVK++K + E ++E+ + H +N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 262 PFLGFCYEKK-KRALIYEFMPNGSLDQYIYDHESS------------NGKRTLEWRTVYQ 308
LG C + +I EF G+L Y+ + TLE Y
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 309 IAVGIARGLEYL-HRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML 367
V A+G+E+L R C +H D+ NI L E KI DFGLA+ K +
Sbjct: 155 FQV--AKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKG 208
Query: 368 DTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAI 426
D R ++APE +F R + + +SDV+S+G+++ E+ S + +P
Sbjct: 209 DARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI----------FSLGASPYPGV- 254
Query: 427 YKQIETEYDFQL-DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEML 478
+I+ E+ +L +G +M L C P RP+ +++VE L
Sbjct: 255 --KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 19/209 (9%)
Query: 204 TKSFSDKLGQGGYADVYK-GTLPDGRLVAVKVMKN--LKDNGEEFINEVASISRTSHVNI 260
T S ++ LG G + V+K G +A K++K +KD EE NE++ +++ H N+
Sbjct: 90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDK-EEVKNEISVMNQLDHANL 148
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ K L+ E++ G L I D ES N E T+ + I G+ ++
Sbjct: 149 IQLYDAFESKNDIVLVMEYVDGGELFDRIID-ESYN---LTELDTILFMK-QICEGIRHM 203
Query: 321 HRGCNIRIVHLDIKPHNIR-LDEDFCP-KISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
H+ + I+HLD+KP NI ++ D KI DFGLA++ + +E GT ++AP
Sbjct: 204 HQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF---GTPEFLAP 257
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
EV F VS +D++S G++ + ++ G
Sbjct: 258 EVVNYDF--VSFPTDMWSVGVIAYMLLSG 284
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 28/230 (12%)
Query: 192 PKRFSYSDVRRMTKSFSD------------KLGQGGYADVYKGTL-PDGRLVAVKVMKNL 238
P+R S+ R + D K+G+G V T+ G+LVAVK M
Sbjct: 8 PQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLR 67
Query: 239 KDNGEEFI-NEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNG 297
K E + NEV + H N+V + ++ EF+ G+L I H N
Sbjct: 68 KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNE 126
Query: 298 KRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT 357
++ + + + + + L LH ++H DIK +I L D K+SDFG Q
Sbjct: 127 EQ------IAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQV 177
Query: 358 EKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
K+ L GT ++APE+ R G + D++S G+M+ EMV G
Sbjct: 178 SKEVPRRKXL--VGTPYWMAPELISRLPYG--PEVDIWSLGIMVIEMVDG 223
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 207 FSDKLGQGGYAD-VYKGTLPDGRLVAVKVMKN---LKDNGEEFIN-EVASISRTSHVNIV 261
F LG+G ++ V L R A+K+++ +K+N ++ E +SR H V
Sbjct: 34 FGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 262 PFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
+ +K + NG L +YI S + E T + A I LEYLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-----ETCTRFYTA-EIVSALEYLH 147
Query: 322 -RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
+G I+H D+KP NI L+ED +I+DFG AK + GTA Y++PE+
Sbjct: 148 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
SD+++ G +I+++V G +EY K I+ EYDF
Sbjct: 204 LTEK--SACKSSDLWALGCIIYQLVAGLP----PFRAGNEYL--IFQKIIKLEYDF 251
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 124/290 (42%), Gaps = 31/290 (10%)
Query: 211 LGQGGYADVYKGTLP--DGRLV--AVKVMKN---LKDNGEEFINEVASISRTSHVNIVPF 263
LG+G + V + L DG V AVK++K + EEF+ E A + H ++
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 264 LGFCYEKKKRA------LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
+G + + +I FM +G L ++ L +T+ + V IA G+
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 318 EYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIA 377
EYL + +H D+ N L ED ++DFGL+++ + + ++ ++A
Sbjct: 151 EYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLA 207
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQ 437
E + V SDV+++G+ + E++ + P A + E Y++
Sbjct: 208 LESLADNLYTV--HSDVWAFGVTMWEIMTRGQT------------PYAGIENAEI-YNYL 252
Query: 438 LDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSIENLQI 487
+ G ++ E +++ + C P RPS T + LE + +L +
Sbjct: 253 IGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSV 302
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 207 FSDKLGQGGYADVYKG-TLPDGRLVAVKVMKN---LKDNGEEFIN-EVASISRTSHVNIV 261
F LG+G ++ V L R A+K+++ +K+N ++ E +SR H V
Sbjct: 18 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 77
Query: 262 PFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
+ +K + NG L +YI S + E T + A I LEYLH
Sbjct: 78 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-----ETCTRFYTA-EIVSALEYLH 131
Query: 322 -RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
+G I+H D+KP NI L+ED +I+DFG AK + GTA Y++PE+
Sbjct: 132 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 187
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
SD+++ G +I+++V G +EY K I+ EYDF
Sbjct: 188 LTEK--SACKSSDLWALGCIIYQLVAGLP----PFRAGNEYL--IFQKIIKLEYDF 235
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 210 KLGQGGYADVYKGTLP-DGRLVAVKVMKNLKDNGEE-----FINEVASISRTS---HVNI 260
++G G Y VYK P G VA+K ++ NGEE + EVA + R H N+
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVR--VPNGEEGLPISTVREVALLRRLEAFEHPNV 68
Query: 261 VPFLGFCYEKK-----KRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIAR 315
V + C + K L++E +DQ + + L T+ + R
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFE-----HVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 316 GLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGY 375
GL++LH C IVH D+KP NI + K++DFGLA+ + + ++ T Y
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVV---VTLWY 177
Query: 376 IAPEVFCRHFGGVSHKSDVYSYGMMIHEM 404
APEV + + D++S G + EM
Sbjct: 178 RAPEVLLQ--STYATPVDMWSVGCIFAEM 204
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 28/230 (12%)
Query: 192 PKRFSYSDVRRMTKSFSD------------KLGQGGYADVYKGTL-PDGRLVAVKVMKNL 238
P+R S+ R + D K+G+G V T+ G+LVAVK M
Sbjct: 6 PQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLR 65
Query: 239 KDNGEEFI-NEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNG 297
K E + NEV + H N+V + ++ EF+ G+L I H N
Sbjct: 66 KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNE 124
Query: 298 KRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT 357
++ + + + + + L LH ++H DIK +I L D K+SDFG Q
Sbjct: 125 EQ------IAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQV 175
Query: 358 EKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
K+ L GT ++APE+ R G + D++S G+M+ EMV G
Sbjct: 176 SKEVPRRKXL--VGTPYWMAPELISRLPYG--PEVDIWSLGIMVIEMVDG 221
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 104/236 (44%), Gaps = 24/236 (10%)
Query: 207 FSDKLGQGGYADVYKG-TLPDGRLVAVKVMKN---LKDNGEEFIN-EVASISRTSHVNIV 261
F LG+G ++ V L R A+K+++ +K+N ++ E +SR H V
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 92
Query: 262 PFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
+ +K + NG L +YI S + T + I LEYLH
Sbjct: 93 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVSALEYLH 146
Query: 322 -RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
+G I+H D+KP NI L+ED +I+DFG AK + GTA Y++PE+
Sbjct: 147 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 202
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
SD+++ G +I+++V G +EY K I+ EYDF
Sbjct: 203 LTEK--SACKSSDLWALGCIIYQLVAGLP----PFRAGNEYL--IFQKIIKLEYDF 250
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 101/220 (45%), Gaps = 33/220 (15%)
Query: 201 RRMTKSFSDKLGQGGYADVY--------KGTLPDGRLVAVKVMKNLKDNGEE----FINE 248
+R K D LG+G + V GT G +VAVK +K D G + + E
Sbjct: 13 KRYLKKIRD-LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALK--ADCGPQHRSGWKQE 66
Query: 249 VASISRTSHVNIVPFLGFCYEKKKRAL--IYEFMPNGSLDQYIYDHESSNGKRTLEWRTV 306
+ + H +I+ + G C ++ +++L + E++P GSL Y+ H + L
Sbjct: 67 IDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL----- 121
Query: 307 YQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT-EKKESFIS 365
A I G+ YLH + +H ++ N+ LD D KI DFGLAK E E +
Sbjct: 122 --FAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 176
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
D + APE C + SDV+S+G+ ++E++
Sbjct: 177 REDGDSPVFWYAPE--CLKEYKFYYASDVWSFGVTLYELL 214
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLKDNG---EEFINEVASISRTSHVNIVPFLGF 266
+G+G +A V + GR VA+K++ + N ++ EV + +H NIV
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 267 CYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNI 326
+K LI E+ G + Y+ H K E R+ ++ I ++Y H+
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEK---EARSKFR---QIVSAVQYCHQK--- 130
Query: 327 RIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR-GTAGYIAPEVF-CRH 384
RIVH D+K N+ LD D KI+DFG + + + LDT G+ Y APE+F +
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEF----TVGGKLDTFCGSPPYAAPELFQGKK 186
Query: 385 FGGVSHKSDVYSYGMMIHEMVIG 407
+ G + DV+S G++++ +V G
Sbjct: 187 YDG--PEVDVWSLGVILYTLVSG 207
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 210 KLGQGGYADVYKGTL-PDGRLVAVKVMKNLKDNGEEFI-NEVASISRTSHVNIVPFLGFC 267
K+G+G V T+ G+LVAVK M K E + NEV + H N+V
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 268 YEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIR 327
+ ++ EF+ G+L I H N ++ + + + + + L LH
Sbjct: 87 LVGDELWVVMEFLEGGALTD-IVTHTRMNEEQ------IAAVCLAVLQALSVLHAQG--- 136
Query: 328 IVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGG 387
++H DIK +I L D K+SDFG Q K+ L GT ++APE+ R G
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPELISRLPYG 194
Query: 388 VSHKSDVYSYGMMIHEMVIG 407
+ D++S G+M+ EMV G
Sbjct: 195 --PEVDIWSLGIMVIEMVDG 212
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 26/207 (12%)
Query: 211 LGQGGYADVYKGTLPD-GRLVAVKVM--KNLK-DNGEEF-INE--VASISRTSHVNIVPF 263
+G+GG+ +VY D G++ A+K + K +K GE +NE + S+ T +
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 264 LGFCYEK-KKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
+ + + K + I + M G L + H S +G + Y A I GLE++H
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDL----HYHLSQHGVFSEADMRFY--AAEIILGLEHMH- 309
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
N +V+ D+KP NI LDE +ISD GLA KK+ S+ GT GY+APEV
Sbjct: 310 --NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVLQ 363
Query: 383 RHFGGVSHKS--DVYSYGMMIHEMVIG 407
+ GV++ S D +S G M+ +++ G
Sbjct: 364 K---GVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 26/207 (12%)
Query: 211 LGQGGYADVYKGTLPD-GRLVAVKVM--KNLK-DNGEEF-INE--VASISRTSHVNIVPF 263
+G+GG+ +VY D G++ A+K + K +K GE +NE + S+ T +
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 255
Query: 264 LGFCYEK-KKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
+ + + K + I + M G L + H S +G + Y A I GLE++H
Sbjct: 256 MSYAFHTPDKLSFILDLMNGGDL----HYHLSQHGVFSEADMRFY--AAEIILGLEHMH- 308
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
N +V+ D+KP NI LDE +ISD GLA KK+ S+ GT GY+APEV
Sbjct: 309 --NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVLQ 362
Query: 383 RHFGGVSHKS--DVYSYGMMIHEMVIG 407
+ GV++ S D +S G M+ +++ G
Sbjct: 363 K---GVAYDSSADWFSLGCMLFKLLRG 386
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 26/207 (12%)
Query: 211 LGQGGYADVYKGTLPD-GRLVAVKVM--KNLK-DNGEEF-INE--VASISRTSHVNIVPF 263
+G+GG+ +VY D G++ A+K + K +K GE +NE + S+ T +
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 264 LGFCYEK-KKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
+ + + K + I + M G L + H S +G + Y A I GLE++H
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDL----HYHLSQHGVFSEADMRFY--AAEIILGLEHMH- 309
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
N +V+ D+KP NI LDE +ISD GLA KK+ S+ GT GY+APEV
Sbjct: 310 --NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVLQ 363
Query: 383 RHFGGVSHKS--DVYSYGMMIHEMVIG 407
+ GV++ S D +S G M+ +++ G
Sbjct: 364 K---GVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 26/207 (12%)
Query: 211 LGQGGYADVYKGTLPD-GRLVAVKVM--KNLK-DNGEEF-INE--VASISRTSHVNIVPF 263
+G+GG+ +VY D G++ A+K + K +K GE +NE + S+ T +
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 264 LGFCYEK-KKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
+ + + K + I + M G L + H S +G + Y A I GLE++H
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDL----HYHLSQHGVFSEADMRFY--AAEIILGLEHMH- 309
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
N +V+ D+KP NI LDE +ISD GLA KK+ S+ GT GY+APEV
Sbjct: 310 --NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYMAPEVLQ 363
Query: 383 RHFGGVSHKS--DVYSYGMMIHEMVIG 407
+ GV++ S D +S G M+ +++ G
Sbjct: 364 K---GVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 201 RRMTKSFSDKLGQGGYADVY--------KGTLPDGRLVAVKVMKNLKDNGEE----FINE 248
+R K D LG+G + V GT G +VAVK +K D G + + E
Sbjct: 30 KRYLKKIRD-LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALK--ADAGPQHRSGWKQE 83
Query: 249 VASISRTSHVNIVPFLGFCYEKKKRAL--IYEFMPNGSLDQYIYDHESSNGKRTLEWRTV 306
+ + H +I+ + G C + +L + E++P GSL Y+ H + L
Sbjct: 84 IDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLL----- 138
Query: 307 YQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT-EKKESFIS 365
A I G+ YLH +H D+ N+ LD D KI DFGLAK E E +
Sbjct: 139 --FAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRV 193
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
D + APE C + SDV+S+G+ ++E++
Sbjct: 194 REDGDSPVFWYAPE--CLKEYKFYYASDVWSFGVTLYELL 231
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 210 KLGQGGYADVYKGTL-PDGRLVAVKVMKNLKDNGEEFI-NEVASISRTSHVNIVPFLGFC 267
K+G+G V T+ G+LVAVK M K E + NEV + H N+V
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 268 YEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIR 327
+ ++ EF+ G+L I H N ++ + + + + + L LH
Sbjct: 91 LVGDELWVVMEFLEGGALTD-IVTHTRMNEEQ------IAAVCLAVLQALSVLHAQG--- 140
Query: 328 IVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGG 387
++H DIK +I L D K+SDFG Q K+ L GT ++APE+ R G
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL--VGTPYWMAPELISRLPYG 198
Query: 388 VSHKSDVYSYGMMIHEMVIG 407
+ D++S G+M+ EMV G
Sbjct: 199 --PEVDIWSLGIMVIEMVDG 216
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLKDNG---EEFINEVASISRTSHVNIVPFLGF 266
+G+G +A V + G+ VAVK++ + N ++ EV + +H NIV
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 267 CYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNI 326
+K L+ E+ G + Y+ H K E R ++ I ++Y H+
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKFR---QIVSAVQYCHQKF-- 133
Query: 327 RIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR-GTAGYIAPEVF-CRH 384
IVH D+K N+ LD D KI+DFG + + +F + LDT G+ Y APE+F +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 385 FGGVSHKSDVYSYGMMIHEMVIG 407
+ G + DV+S G++++ +V G
Sbjct: 189 YDG--PEVDVWSLGVILYTLVSG 209
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLKDNG---EEFINEVASISRTSHVNIVPFLGF 266
+G+G +A V + G+ VAVK++ + N ++ EV + +H NIV
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 267 CYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNI 326
+K L+ E+ G + Y+ H K E R ++ I ++Y H+
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKFR---QIVSAVQYCHQKF-- 133
Query: 327 RIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR-GTAGYIAPEVF-CRH 384
IVH D+K N+ LD D KI+DFG + + +F + LDT G+ Y APE+F +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 385 FGGVSHKSDVYSYGMMIHEMVIG 407
+ G + DV+S G++++ +V G
Sbjct: 189 YDG--PEVDVWSLGVILYTLVSG 209
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 132/313 (42%), Gaps = 56/313 (17%)
Query: 201 RRMTKSFSDKLGQGGYADV----YKGTLP-DGRLVAVKVMK-----NLKDNGEEFINEVA 250
+R K D LG+G + V Y T G +VAVK +K L+ + E+
Sbjct: 7 KRYLKKIRD-LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQ---REIE 62
Query: 251 SISRTSHVNIVPFLGFCYEKKKRA--LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQ 308
+ H +IV + G C ++ +++ L+ E++P GSL Y+ H + L
Sbjct: 63 ILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL------- 115
Query: 309 IAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT-EKKESFISML 367
A I G+ YLH +H + N+ LD D KI DFGLAK E E +
Sbjct: 116 FAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 172
Query: 368 DTRGTAGYIAPEVF--CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNA 425
D + APE C+ + + SDV+S+G+ ++E++ C S P+
Sbjct: 173 DGDSPVFWYAPECLKECKFY----YASDVWSFGVTLYELL---------TYCDSNQSPHT 219
Query: 426 IYKQIETEYDFQLDGVVTEEEKEMAKKM------------ILVSLWCIQTHPPDRPSMTK 473
+ ++ Q+ + E E +++ ++ + W +T RP+
Sbjct: 220 KFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCW--ETEASFRPTFQN 277
Query: 474 VVEMLEGSIENLQ 486
+V +L+ + E Q
Sbjct: 278 LVPILQTAQEKYQ 290
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 201 RRMTKSFSDKLGQGGYADVY--------KGTLPDGRLVAVKVMKNLKDNGEE----FINE 248
+R K D LG+G + V GT G +VAVK +K D G + + E
Sbjct: 13 KRYLKKIRD-LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALK--ADCGPQHRSGWKQE 66
Query: 249 VASISRTSHVNIVPFLGFCYEKKKRAL--IYEFMPNGSLDQYIYDHESSNGKRTLEWRTV 306
+ + H +I+ + G C ++ +++L + E++P GSL Y+ H + L
Sbjct: 67 IDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL----- 121
Query: 307 YQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT-EKKESFIS 365
A I G+ YLH +H ++ N+ LD D KI DFGLAK E E +
Sbjct: 122 --FAQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 176
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
D + APE C + SDV+S+G+ ++E++
Sbjct: 177 REDGDSPVFWYAPE--CLKEYKFYYASDVWSFGVTLYELL 214
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 132/313 (42%), Gaps = 56/313 (17%)
Query: 201 RRMTKSFSDKLGQGGYADV----YKGTLP-DGRLVAVKVMK-----NLKDNGEEFINEVA 250
+R K D LG+G + V Y T G +VAVK +K L+ + E+
Sbjct: 8 KRYLKKIRD-LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQ---REIE 63
Query: 251 SISRTSHVNIVPFLGFCYEKKKRA--LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQ 308
+ H +IV + G C ++ +++ L+ E++P GSL Y+ H + L
Sbjct: 64 ILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL------- 116
Query: 309 IAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT-EKKESFISML 367
A I G+ YLH +H + N+ LD D KI DFGLAK E E +
Sbjct: 117 FAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 173
Query: 368 DTRGTAGYIAPEVF--CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNA 425
D + APE C+ + + SDV+S+G+ ++E++ C S P+
Sbjct: 174 DGDSPVFWYAPECLKECKFY----YASDVWSFGVTLYELL---------TYCDSNQSPHT 220
Query: 426 IYKQIETEYDFQLDGVVTEEEKEMAKKM------------ILVSLWCIQTHPPDRPSMTK 473
+ ++ Q+ + E E +++ ++ + W +T RP+
Sbjct: 221 KFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCW--ETEASFRPTFQN 278
Query: 474 VVEMLEGSIENLQ 486
+V +L+ + E Q
Sbjct: 279 LVPILQTAQEKYQ 291
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 93/213 (43%), Gaps = 32/213 (15%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCYEKK 271
+G + V+K L + VAVK+ + EV S+ H NI+ F+G EK+
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIG--AEKR 89
Query: 272 KRA------LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR--- 322
+ LI F GSL ++ + W + IA +ARGL YLH
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFL-------KANVVSWNELCHIAETMARGLAYLHEDIP 142
Query: 323 ----GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
G I H DIK N+ L + I+DFGLA + E +S GT Y+AP
Sbjct: 143 GLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAP 202
Query: 379 EVFCRHFGGVSHKS------DVYSYGMMIHEMV 405
EV G ++ + D+Y+ G+++ E+
Sbjct: 203 EVL---EGAINFQRDAFLRIDMYAMGLVLWELA 232
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 28/230 (12%)
Query: 192 PKRFSYSDVRRMTKSFSD------------KLGQGGYADVYKGTL-PDGRLVAVKVMKNL 238
P+R S+ R + D K+G+G V T+ G+LVAVK M
Sbjct: 51 PQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLR 110
Query: 239 KDNGEEFI-NEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNG 297
K E + NEV + H N+V + ++ EF+ G+L I H N
Sbjct: 111 KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNE 169
Query: 298 KRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT 357
++ + + + + + L LH ++H DIK +I L D K+SDFG Q
Sbjct: 170 EQ------IAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQV 220
Query: 358 EKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
K+ L GT ++APE+ R G + D++S G+M+ EMV G
Sbjct: 221 SKEVPRRKXL--VGTPYWMAPELISRLPYG--PEVDIWSLGIMVIEMVDG 266
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 211 LGQGGYADVYKGTL-PDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGF 266
LG+GG+ +V + G++ A K ++ + GE I + V L +
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 267 CYEKKKR-ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
YE K L+ M G L +IY H G E R V+ A I GLE LHR
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIY-HMGQAG--FPEARAVF-YAAEICCGLEDLHRE-- 305
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
RIV+ D+KP NI LD+ +ISD GLA + ++ + GT GY+APEV
Sbjct: 306 -RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV---GTVGYMAPEVVKNE- 360
Query: 386 GGVSHKSDVYSYGMMIHEMVIGR 408
+ D ++ G +++EM+ G+
Sbjct: 361 -RYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 211 LGQGGYADVYKGTL-PDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGF 266
LG+GG+ +V + G++ A K ++ + GE I + V L +
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 267 CYEKKKR-ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
YE K L+ M G L +IY H G E R V+ A I GLE LHR
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIY-HMGQAG--FPEARAVF-YAAEICCGLEDLHRE-- 305
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
RIV+ D+KP NI LD+ +ISD GLA + ++ + GT GY+APEV
Sbjct: 306 -RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV---GTVGYMAPEVVKNE- 360
Query: 386 GGVSHKSDVYSYGMMIHEMVIGR 408
+ D ++ G +++EM+ G+
Sbjct: 361 -RYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 133/298 (44%), Gaps = 51/298 (17%)
Query: 210 KLGQGGYADVYK------GTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPF 263
+LG G V+K G + +L+ +++ +++ + I E+ + + IV F
Sbjct: 40 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN---QIIRELQVLHECNSPYIVGF 96
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRG 323
G Y + ++ E M GSLDQ + R E + + ++++ + +GL YL
Sbjct: 97 YGAFYSDGEISICMEHMDGGSLDQVL-----KKAGRIPE-QILGKVSIAVIKGLTYLRE- 149
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT--EKKESFISMLDTRGTAGYIAPEVF 381
+I+H D+KP NI ++ K+ DFG++ Q SF+ GT Y++PE
Sbjct: 150 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPERL 202
Query: 382 -CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDG 440
H+ S +SD++S G+ + EM +GR P K++E + Q++G
Sbjct: 203 QGTHY---SVQSDIWSMGLSLVEMAVGRYP-----------IPPPDAKELELMFGCQVEG 248
Query: 441 VVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSIENLQIPPKPSLSLPTG 498
E ++ + + + PP + E+L+ + + PPK LP+G
Sbjct: 249 DAAETPPRPRTPGRPLNKFGMDSRPP-----MAIFELLDYIVN--EPPPK----LPSG 295
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 210 KLGQGGYADVYKGTL-PDGRLVAVKVMKNLKDNGEEFI-NEVASISRTSHVNIVPFLGFC 267
K+G+G V T+ G+LVAVK M K E + NEV + H N+V
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 268 YEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIR 327
+ ++ EF+ G+L I H N ++ + + + + + L LH
Sbjct: 218 LVGDELWVVMEFLEGGALTD-IVTHTRMNEEQ------IAAVCLAVLQALSVLHAQG--- 267
Query: 328 IVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGG 387
++H DIK +I L D K+SDFG Q K+ L GT ++APE+ R G
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV--GTPYWMAPELISRLPYG 325
Query: 388 VSHKSDVYSYGMMIHEMVIG 407
+ D++S G+M+ EMV G
Sbjct: 326 --PEVDIWSLGIMVIEMVDG 343
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 210 KLGQGGYADVY----KGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLG 265
KLG G Y +V K T + + ++ + + + EVA + H NI+
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 266 FCYEKKKRALIYEFMPNGSL-DQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
F +K+ L+ E G L D+ I+ + + + I + G+ YLH+
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV-------IIKQVLSGVTYLHKH- 155
Query: 325 NIRIVHLDIKPHNIRL---DEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF 381
IVH D+KP N+ L ++D KI DFGL+ E ++ M + GTA YIAPEV
Sbjct: 156 --NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK---KMKERLGTAYYIAPEVL 210
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIG 407
+ + K DV+S G+++ ++ G
Sbjct: 211 RKKY---DEKCDVWSIGVILFILLAG 233
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 26/205 (12%)
Query: 279 FMPNGSLDQYIYDHESSNG--KRTLEWRTVYQIAVGIARGLEYLH-RGCNIRIVHLDIKP 335
F + SL + + E S+G K + + + +ARG+E+L R C +H D+
Sbjct: 173 FQEDKSLSD-VEEEEDSDGFYKEPITMEDLISYSFQVARGMEFLSSRKC----IHRDLAA 227
Query: 336 HNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE-VFCRHFGGVSHKSDV 394
NI L E+ KI DFGLA+ K ++ DTR ++APE +F + + S KSDV
Sbjct: 228 RNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIY---STKSDV 284
Query: 395 YSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQL-DGVVTEEEKEMAKKM 453
+SYG+++ E+ S +P Q++ ++ +L +G+ + ++
Sbjct: 285 WSYGVLLWEI----------FSLGGSPYPGV---QMDEDFCSRLREGMRMRAPEYSTPEI 331
Query: 454 ILVSLWCIQTHPPDRPSMTKVVEML 478
+ L C P +RP ++VE L
Sbjct: 332 YQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLKDNG---EEFINEVASISRTSHVNIVPFLGF 266
+G+G +A V + G+ VAVK++ + N ++ EV + +H NIV
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 267 CYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNI 326
+K L+ E+ G + Y+ H K E R ++ I ++Y H+
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEK---EARAKFR---QIVSAVQYCHQKF-- 126
Query: 327 RIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR-GTAGYIAPEVF-CRH 384
IVH D+K N+ LD D KI+DFG + + +F + LDT G+ Y APE+F +
Sbjct: 127 -IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDTFCGSPPYAAPELFQGKK 181
Query: 385 FGGVSHKSDVYSYGMMIHEMVIG 407
+ G + DV+S G++++ +V G
Sbjct: 182 YDG--PEVDVWSLGVILYTLVSG 202
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Query: 227 GRLVAVKVMKNLKDNGEEFI-NEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSL 285
GR VAVK+M K E + NEV + H N+V ++ ++ EF+ G+L
Sbjct: 70 GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129
Query: 286 DQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFC 345
+ + L + + + + L YLH ++H DIK +I L D
Sbjct: 130 TDIV-------SQVRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGR 179
Query: 346 PKISDFG----LAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMI 401
K+SDFG ++K K++ + GT ++APEV R + + D++S G+M+
Sbjct: 180 VKLSDFGFCAQISKDVPKRKXLV------GTPYWMAPEVISRSL--YATEVDIWSLGIMV 231
Query: 402 HEMVIG 407
EMV G
Sbjct: 232 IEMVDG 237
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLKDNG---EEFINEVASISRTSHVNIVPFLGF 266
+G+G +A V + G+ VAV+++ + N ++ EV + +H NIV
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 267 CYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNI 326
+K L+ E+ G + Y+ H K E R ++ I ++Y H+
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKFR---QIVSAVQYCHQKF-- 133
Query: 327 RIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR-GTAGYIAPEVF-CRH 384
IVH D+K N+ LD D KI+DFG + + +F + LDT G+ Y APE+F +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 385 FGGVSHKSDVYSYGMMIHEMVIG 407
+ G + DV+S G++++ +V G
Sbjct: 189 YDG--PEVDVWSLGVILYTLVSG 209
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 207 FSDKLGQGGYADVYKG-TLPDGRLVAVKVMKN---LKDNGEEFIN-EVASISRTSHVNIV 261
F LG+G ++ V L R A+K+++ +K+N ++ E +SR H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 262 PFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
+ +K + NG L +YI S + E T + A I LEYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-----ETCTRFYTA-EIVSALEYLH 149
Query: 322 -RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
+G I+H D+KP NI L+ED +I+DFG AK + GTA Y++PE+
Sbjct: 150 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIG 407
SD+++ G +I+++V G
Sbjct: 206 LTEK--SAXKSSDLWALGCIIYQLVAG 230
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 25/205 (12%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLKDNG---EEFINEVASISRTSHVNIVPFLGF 266
+G+G +A V + GR VA+K++ + N ++ EV + +H NIV
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 267 CYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNI 326
+K LI E+ G + Y+ H K E R+ ++ I ++Y H+
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEK---EARSKFR---QIVSAVQYCHQK--- 133
Query: 327 RIVHLDIKPHNIRLDEDFCPKISDFGLAKQTE---KKESFISMLDTRGTAGYIAPEVF-C 382
RIVH D+K N+ LD D KI+DFG + + K ++F G Y APE+F
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFC------GAPPYAAPELFQG 187
Query: 383 RHFGGVSHKSDVYSYGMMIHEMVIG 407
+ + G + DV+S G++++ +V G
Sbjct: 188 KKYDG--PEVDVWSLGVILYTLVSG 210
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 207 FSDKLGQGGYADVYKG-TLPDGRLVAVKVMKN---LKDNGEEFIN-EVASISRTSHVNIV 261
F LG+G ++ V L R A+K+++ +K+N ++ E +SR H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 262 PFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
+ +K + NG L +YI S + E T + A I LEYLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD-----ETCTRFYTA-EIVSALEYLH 149
Query: 322 -RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
+G I+H D+KP NI L+ED +I+DFG AK + GTA Y++PE+
Sbjct: 150 GKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIG 407
SD+++ G +I+++V G
Sbjct: 206 LTEK--SACKSSDLWALGCIIYQLVAG 230
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 211 LGQGGYADVYKG-TLPDGRLVAVKVMKNLKDN-GEEFINEVASISRTSHVNIVPFLGFCY 268
LG+G Y VY G L + +A+K + + E+A H NIV +LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 269 EKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRI 328
E + E +P GSL + S G +T+ I GL+YLH + +I
Sbjct: 90 ENGFIKIFMEQVPGGSLSALL---RSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQI 143
Query: 329 VHLDIKPHNIRLDE-DFCPKISDFGLAKQTEK----KESFISMLDTRGTAGYIAPEVFCR 383
VH DIK N+ ++ KISDFG +K+ E+F GT Y+APE+ +
Sbjct: 144 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT------GTLQYMAPEIIDK 197
Query: 384 HFGGVSHKSDVYSYGMMIHEMVIGR 408
G +D++S G I EM G+
Sbjct: 198 GPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
Query: 199 DVRRMTKSFSDKLGQGGYADVY----KGTLPDGRLVAVKVM--KNLKDNGEEFINEVASI 252
D++++ + F + LG G +++V K T G+L AVK + K LK NE+A +
Sbjct: 19 DIKKIFE-FKETLGTGAFSEVVLAEEKAT---GKLFAVKCIPKKALKGKESSIENEIAVL 74
Query: 253 SRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVG 312
+ H NIV L+ + + G L +D G T + +
Sbjct: 75 RKIKHENIVALEDIYESPNHLYLVMQLVSGGEL----FDRIVEKGFYTE--KDASTLIRQ 128
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNI---RLDEDFCPKISDFGLAKQTEKKESFISMLDT 369
+ + YLHR + IVH D+KP N+ DE+ ISDFGL+K K + M
Sbjct: 129 VLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTA 182
Query: 370 RGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
GT GY+APEV + S D +S G++ + ++ G
Sbjct: 183 CGTPGYVAPEVLAQK--PYSKAVDCWSIGVIAYILLCG 218
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF L Q + D ++ + + + +GL + H
Sbjct: 69 DVIHTENKLYLVFEF-----LHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 122
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 123 --RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYRAP 172
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 173 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 210 KLGQGGYADVYKGT-LPDGRLVAVKVMKNLKDNGEE---FINEVASISRTSHVNIVPFLG 265
+LG+G Y V K +P G+++AVK ++ ++ E+ ++ S+ V F G
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ + + E M + SLD++ Y G +T+ + +IAV I + LE+LH
Sbjct: 118 ALFREGDVWICMELM-DTSLDKF-YKQVIDKG-QTIPEDILGKIAVSIVKALEHLH--SK 172
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
+ ++H D+KP N+ ++ K+ DFG++ +S +D G Y+APE
Sbjct: 173 LSVIHRDVKPSNVLINALGQVKMCDFGISGYL--VDSVAKTIDA-GCKPYMAPERINPEL 229
Query: 386 G--GVSHKSDVYSYGMMIHEMVIGR 408
G S KSD++S G+ + E+ I R
Sbjct: 230 NQKGYSVKSDIWSLGITMIELAILR 254
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ S+D + D ++ + + + +GL + H
Sbjct: 72 DVIHTENKLYLVFEFL---SMD--LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 125
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 126 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYRAP 175
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 176 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 204
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 244 EFINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEW 303
+ I E+ + + IV F G Y + ++ E M GSLDQ + + KR E
Sbjct: 60 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE-----AKRIPE- 113
Query: 304 RTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT--EKKE 361
+ ++++ + RGL YL +I+H D+KP NI ++ K+ DFG++ Q
Sbjct: 114 EILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 171
Query: 362 SFISMLDTRGTAGYIAPEVF-CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
SF+ GT Y+APE H+ S +SD++S G+ + E+ +GR
Sbjct: 172 SFV------GTRSYMAPERLQGTHY---SVQSDIWSMGLSLVELAVGR 210
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ S+D + D ++ + + + +GL + H
Sbjct: 71 DVIHTENKLYLVFEFL---SMD--LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH- 124
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 125 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYRAP 174
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 175 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 203
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 211 LGQGGYADVYKG-TLPDGRLVAVKVMKNLKDN-GEEFINEVASISRTSHVNIVPFLGFCY 268
LG+G Y VY G L + +A+K + + E+A H NIV +LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 269 EKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRI 328
E + E +P GSL + S G +T+ I GL+YLH + +I
Sbjct: 76 ENGFIKIFMEQVPGGSLSALL---RSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQI 129
Query: 329 VHLDIKPHNIRLDE-DFCPKISDFGLAKQTEK----KESFISMLDTRGTAGYIAPEVFCR 383
VH DIK N+ ++ KISDFG +K+ E+F GT Y+APE+ +
Sbjct: 130 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT------GTLQYMAPEIIDK 183
Query: 384 HFGGVSHKSDVYSYGMMIHEMVIGR 408
G +D++S G I EM G+
Sbjct: 184 GPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 227 GRLVAVKVMKNL-KDNGEEFINEVASISRTSHVNIVPFLGFCYEKKKRAL--IYEFMPNG 283
G LVAVK +++ D +F E+ + IV + G Y +++L + E++P+G
Sbjct: 40 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 99
Query: 284 SLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDED 343
L ++ H + L+ + + I +G+EYL + R VH D+ NI ++ +
Sbjct: 100 CLRDFLQRHRA-----RLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESE 151
Query: 344 FCPKISDFGLAKQTE-KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIH 402
KI+DFGLAK K+ ++ + + APE + S +SDV+S+G++++
Sbjct: 152 AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI--FSRQSDVWSFGVVLY 209
Query: 403 EMVIGRKNADVKVSCSSEYF 422
E+ D S S+E+
Sbjct: 210 ELFT---YCDKSCSPSAEFL 226
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 124/285 (43%), Gaps = 43/285 (15%)
Query: 211 LGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEE---FINEVASISRTSHVNIVPFLGFC 267
+G+G + VY G VA++++ +DN ++ F EV + +T H N+V F+G C
Sbjct: 41 IGKGRFGQVYHGRWHGE--VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 268 YEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIR 327
A+I +L + D K L+ QIA I +G+ YLH
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVVRD-----AKIVLDVNKTRQIAQEIVKGMGYLHAKG--- 150
Query: 328 IVHLDIKPHNIRLDEDFCPKISDFGL-----AKQTEKKESFISMLDTRGTAGYIAPEVFC 382
I+H D+K N+ D I+DFGL Q ++E + + + G ++APE+
Sbjct: 151 ILHKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQN--GWLCHLAPEII- 206
Query: 383 RHFG--------GVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEY 434
R S SDV++ G + +E+ + K + AI Q+ T
Sbjct: 207 RQLSPDTEEDKLPFSKHSDVFALGTIWYEL--HAREWPFKTQPA-----EAIIWQMGTGM 259
Query: 435 DFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
L + M K++ + L+C +RP+ TK+++MLE
Sbjct: 260 KPNLSQI------GMGKEISDILLFCWAFEQEERPTFTKLMDMLE 298
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 227 GRLVAVKVMKNL-KDNGEEFINEVASISRTSHVNIVPFLGFCYEKKKRAL--IYEFMPNG 283
G LVAVK +++ D +F E+ + IV + G Y +++L + E++P+G
Sbjct: 39 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 98
Query: 284 SLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDED 343
L ++ H + L+ + + I +G+EYL + R VH D+ NI ++ +
Sbjct: 99 CLRDFLQRHRA-----RLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESE 150
Query: 344 FCPKISDFGLAKQTE-KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIH 402
KI+DFGLAK K+ ++ + + APE + S +SDV+S+G++++
Sbjct: 151 AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI--FSRQSDVWSFGVVLY 208
Query: 403 EMVIGRKNADVKVSCSSEYF 422
E+ D S S+E+
Sbjct: 209 ELFT---YCDKSCSPSAEFL 225
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 227 GRLVAVKVMKNL-KDNGEEFINEVASISRTSHVNIVPFLGFCYEKKKRAL--IYEFMPNG 283
G LVAVK +++ D +F E+ + IV + G Y +++L + E++P+G
Sbjct: 52 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 111
Query: 284 SLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDED 343
L ++ H + L+ + + I +G+EYL + R VH D+ NI ++ +
Sbjct: 112 CLRDFLQRHRA-----RLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESE 163
Query: 344 FCPKISDFGLAKQTE-KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIH 402
KI+DFGLAK K+ ++ + + APE + S +SDV+S+G++++
Sbjct: 164 AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNI--FSRQSDVWSFGVVLY 221
Query: 403 EMVIGRKNADVKVSCSSEYF 422
E+ D S S+E+
Sbjct: 222 ELFT---YCDKSCSPSAEFL 238
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 107/209 (51%), Gaps = 30/209 (14%)
Query: 211 LGQGGYADVY---KGTLPDGR-LVAVKVMKNLKDNGEEFIN---EVASISRTSHVNIVPF 263
LGQG + V+ K + D R L A+KV+K + + E + +H IV
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK- 90
Query: 264 LGFCYEKK-KRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
L + ++ + K LI +F+ G L + S T E Y + +A L++LH
Sbjct: 91 LHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALA--LDHLH- 143
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT---EKKE-SFISMLDTRGTAGYIAP 378
++ I++ D+KP NI LDE+ K++DFGL+K++ EKK SF GT Y+AP
Sbjct: 144 --SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC------GTVEYMAP 195
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
EV R G + +D +S+G+++ EM+ G
Sbjct: 196 EVVNRR--GHTQSADWWSFGVLMFEMLTG 222
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 102/224 (45%), Gaps = 33/224 (14%)
Query: 200 VRRMTKSFSDK------LGQGGYADVY--KGTLPDGRLVAVKVMKNL----KDNGEEFIN 247
V+ T FSD+ LG+G + +V K + G+ AVKV+ K + E +
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLR 75
Query: 248 EVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSL-DQYIYDHESSNGKRTLEWRTV 306
EV + + H NI F +K L+ E G L D+ I S R +
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RII 132
Query: 307 YQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLD---EDFCPKISDFGLAKQTEKKESF 363
Q+ GI Y H+ +IVH D+KP N+ L+ +D +I DFGL+ E +
Sbjct: 133 RQVLSGIT----YXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-- 183
Query: 364 ISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
D GTA YIAPEV G K DV+S G++++ ++ G
Sbjct: 184 -KXKDKIGTAYYIAPEVL---HGTYDEKCDVWSTGVILYILLSG 223
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 25/211 (11%)
Query: 205 KSFSDKLGQ-GGYADVYKGTLPDGRLVAVKVMKNLK--DNGEEFINEVASISRTSHVNIV 261
+ F + +G+ G + VYK + ++A + + K + E+++ E+ ++ H NIV
Sbjct: 11 EDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 70
Query: 262 PFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
L Y + ++ EF G++D + + E R L + + L YLH
Sbjct: 71 KLLDAFYYENNLWILIEFCAGGAVDAVMLELE-----RPLTESQIQVVCKQTLDALNYLH 125
Query: 322 RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGL-AKQT----EKKESFISMLDTRGTAGYI 376
+I+H D+K NI D K++DFG+ AK T ++++SFI GT ++
Sbjct: 126 DN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI------GTPYWM 176
Query: 377 APE-VFCRHFGG--VSHKSDVYSYGMMIHEM 404
APE V C +K+DV+S G+ + EM
Sbjct: 177 APEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 115/274 (41%), Gaps = 36/274 (13%)
Query: 205 KSFSD--KLGQGGYADVYKGT-LPDGRLVAVKVM----KNLKDNGEEFINEVASISRTSH 257
K FSD ++G G + VY + + +VA+K M K + ++ I EV + + H
Sbjct: 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 113
Query: 258 VNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
N + + G CY ++ A + GS + H K+ L+ + + G +GL
Sbjct: 114 PNTIQYRG-CYLREHTAWLVMEYCLGSASDLLEVH-----KKPLQEVEIAAVTHGALQGL 167
Query: 318 EYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIA 377
YLH + ++H D+K NI L E K+ DFG A F+ GT ++A
Sbjct: 168 AYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------GTPYWMA 218
Query: 378 PEV-FCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
PEV G K DV+S G+ E+ RK ++ S A+Y + E
Sbjct: 219 PEVILAMDEGQYDGKVDVWSLGITCIELA-ERKPPLFNMNAMS-----ALYHIAQNESPA 272
Query: 437 QLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPS 470
G +E + C+Q P DRP+
Sbjct: 273 LQSGHWSEYFRNFVDS-------CLQKIPQDRPT 299
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 305 TVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFI 364
TV + L+YL N RI+H D+KP NI LDE I+DF +A ++
Sbjct: 116 TVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQIT 172
Query: 365 SMLDTRGTAGYIAPEVF-CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSE 420
+M GT Y+APE+F R G S D +S G+ +E++ GR+ ++ S SS+
Sbjct: 173 TMA---GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK 226
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 97/220 (44%), Gaps = 25/220 (11%)
Query: 211 LGQGGYADVYKGTLPDGRL----VAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPFL 264
LG+G +V L R+ VAVK+ MK D E E+ +H N+V F
Sbjct: 14 LGEGAAGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE-WRTVYQIAVGIARGLEYLHRG 323
G E + L E+ G L I E G + R +Q+ G+ YLH
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVV----YLH-- 121
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAK--QTEKKESFISMLDTRGTAGYIAPEVF 381
I I H DIKP N+ LDE KISDFGLA + +E ++ + GT Y+APE+
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--CGTLPYVAPELL 178
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
R + DV+S G+++ M+ G D EY
Sbjct: 179 KRREFH-AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 139/329 (42%), Gaps = 57/329 (17%)
Query: 186 NYGSLAPKRFSYS---DVRRMTKSFSDKLGQGGYADVYKGTL-----PDGRL-VAVKVMK 236
NY + P + Y + R SF LG G + V + T D + VAVK++K
Sbjct: 26 NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 85
Query: 237 ---NLKDNGEEFINEVASISRT-SHVNIVPFLGFCYEKKKRALIYEFMPNGSL------- 285
+L + E ++E+ +S +H+NIV LG C +I E+ G L
Sbjct: 86 PSAHLTER-EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK 144
Query: 286 -DQYIYDHES----SNGKRTLEWRTVYQIAVGIARGLEYL-HRGCNIRIVHLDIKPHNIR 339
D +I S + + L+ + + +A+G+ +L + C +H D+ NI
Sbjct: 145 RDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNIL 200
Query: 340 LDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGV-SHKSDVYSYG 398
L KI DFGLA+ + +++ + R ++APE F V + +SDV+SYG
Sbjct: 201 LTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESI---FNCVYTFESDVWSYG 257
Query: 399 MMIHEMVIGRKNADVKVSCSSEYFP-----NAIYKQIETEYDFQLDGVVTEEEKEMAKKM 453
+ + E+ S S +P + YK I+ +G + +M
Sbjct: 258 IFLWEL----------FSLGSSPYPGMPVDSKFYKMIK-------EGFRMLSPEHAPAEM 300
Query: 454 ILVSLWCIQTHPPDRPSMTKVVEMLEGSI 482
+ C P RP+ ++V+++E I
Sbjct: 301 YDIMKTCWDADPLKRPTFKQIVQLIEKQI 329
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 34/252 (13%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT------ELANALSYCH---S 130
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR-GTAGYIAPEVFCRH 384
R++H DIKP N+ L + KI+DFG + S DT GT Y+ PE+
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPS-----SRRDTLCGTLDYLPPEM---- 181
Query: 385 FGGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVV 442
G H K D++S G++ +E ++G + + Y++I + +F V
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET-------YRRI-SRVEFTFPDFV 233
Query: 443 TEEEKEMAKKMI 454
TE +++ +++
Sbjct: 234 TEGARDLISRLL 245
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 107/209 (51%), Gaps = 30/209 (14%)
Query: 211 LGQGGYADVY---KGTLPDGR-LVAVKVMKNLKDNGEEFIN---EVASISRTSHVNIVPF 263
LGQG + V+ K + D R L A+KV+K + + E + +H IV
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK- 90
Query: 264 LGFCYEKK-KRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
L + ++ + K LI +F+ G L + S T E Y + +A L++LH
Sbjct: 91 LHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALA--LDHLH- 143
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT---EKKE-SFISMLDTRGTAGYIAP 378
++ I++ D+KP NI LDE+ K++DFGL+K++ EKK SF GT Y+AP
Sbjct: 144 --SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC------GTVEYMAP 195
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
EV R G + +D +S+G+++ EM+ G
Sbjct: 196 EVVNRR--GHTQSADWWSFGVLMFEMLTG 222
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 107/209 (51%), Gaps = 30/209 (14%)
Query: 211 LGQGGYADVY---KGTLPDGR-LVAVKVMKNLKDNGEEFIN---EVASISRTSHVNIVPF 263
LGQG + V+ K + D R L A+KV+K + + E + +H IV
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK- 91
Query: 264 LGFCYEKK-KRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
L + ++ + K LI +F+ G L + S T E Y + +A L++LH
Sbjct: 92 LHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALA--LDHLH- 144
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT---EKKE-SFISMLDTRGTAGYIAP 378
++ I++ D+KP NI LDE+ K++DFGL+K++ EKK SF GT Y+AP
Sbjct: 145 --SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC------GTVEYMAP 196
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
EV R G + +D +S+G+++ EM+ G
Sbjct: 197 EVVNRR--GHTQSADWWSFGVLMFEMLTG 223
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 139/329 (42%), Gaps = 57/329 (17%)
Query: 186 NYGSLAPKRFSYS---DVRRMTKSFSDKLGQGGYADVYKGTL-----PDGRL-VAVKVMK 236
NY + P + Y + R SF LG G + V + T D + VAVK++K
Sbjct: 3 NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 62
Query: 237 ---NLKDNGEEFINEVASISRT-SHVNIVPFLGFCYEKKKRALIYEFMPNGSL------- 285
+L + E ++E+ +S +H+NIV LG C +I E+ G L
Sbjct: 63 PSAHLTER-EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK 121
Query: 286 -DQYIYDHES----SNGKRTLEWRTVYQIAVGIARGLEYL-HRGCNIRIVHLDIKPHNIR 339
D +I S + + L+ + + +A+G+ +L + C +H D+ NI
Sbjct: 122 RDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNIL 177
Query: 340 LDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGV-SHKSDVYSYG 398
L KI DFGLA+ + +++ + R ++APE F V + +SDV+SYG
Sbjct: 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI---FNCVYTFESDVWSYG 234
Query: 399 MMIHEMVIGRKNADVKVSCSSEYFP-----NAIYKQIETEYDFQLDGVVTEEEKEMAKKM 453
+ + E+ S S +P + YK I+ +G + +M
Sbjct: 235 IFLWEL----------FSLGSSPYPGMPVDSKFYKMIK-------EGFRMLSPEHAPAEM 277
Query: 454 ILVSLWCIQTHPPDRPSMTKVVEMLEGSI 482
+ C P RP+ ++V+++E I
Sbjct: 278 YDIMKTCWDADPLKRPTFKQIVQLIEKQI 306
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLKDNG---EEFINEVASISRTSHVNIVPFLGF 266
+G+G +A V + G+ VAVK++ + N ++ EV + +H NIV
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 267 CYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNI 326
+K L+ E+ G + Y+ H K E R ++ I ++Y H+
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKFR---QIVSAVQYCHQKF-- 133
Query: 327 RIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR-GTAGYIAPEVF-CRH 384
IVH D+K N+ LD D KI+DFG + + +F + LD G Y APE+F +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 385 FGGVSHKSDVYSYGMMIHEMVIG 407
+ G + DV+S G++++ +V G
Sbjct: 189 YDG--PEVDVWSLGVILYTLVSG 209
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 207 FSDKLGQGGYADVYKGTLP-DGRLVAVKVMKNLKDNGEEFI----NEVASISRTSHVNIV 261
D LG G + V G G VAVK++ K + + E+ ++ H +I+
Sbjct: 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHII 74
Query: 262 PFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
++ E++ G L YI H +E R ++Q I ++Y H
Sbjct: 75 KLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVE---EMEARRLFQ---QILSAVDYCH 128
Query: 322 RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF 381
R +VH D+KP N+ LD KI+DFGL+ E + D+ G+ Y APEV
Sbjct: 129 RHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRDSCGSPNYAAPEVI 182
Query: 382 C-RHFGGVSHKSDVYSYGMMIHEMVIG 407
R + G + D++S G++++ ++ G
Sbjct: 183 SGRLYAGP--EVDIWSCGVILYALLCG 207
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 139/329 (42%), Gaps = 57/329 (17%)
Query: 186 NYGSLAPKRFSYS---DVRRMTKSFSDKLGQGGYADVYKGTL-----PDGRL-VAVKVMK 236
NY + P + Y + R SF LG G + V + T D + VAVK++K
Sbjct: 26 NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 85
Query: 237 ---NLKDNGEEFINEVASISRT-SHVNIVPFLGFCYEKKKRALIYEFMPNGSL------- 285
+L + E ++E+ +S +H+NIV LG C +I E+ G L
Sbjct: 86 PSAHLTER-EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK 144
Query: 286 -DQYIYDHES----SNGKRTLEWRTVYQIAVGIARGLEYL-HRGCNIRIVHLDIKPHNIR 339
D +I S + + L+ + + +A+G+ +L + C +H D+ NI
Sbjct: 145 RDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNIL 200
Query: 340 LDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGV-SHKSDVYSYG 398
L KI DFGLA+ + +++ + R ++APE F V + +SDV+SYG
Sbjct: 201 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI---FNCVYTFESDVWSYG 257
Query: 399 MMIHEMVIGRKNADVKVSCSSEYFP-----NAIYKQIETEYDFQLDGVVTEEEKEMAKKM 453
+ + E+ S S +P + YK I+ +G + +M
Sbjct: 258 IFLWEL----------FSLGSSPYPGMPVDSKFYKMIK-------EGFRMLSPEHAPAEM 300
Query: 454 ILVSLWCIQTHPPDRPSMTKVVEMLEGSI 482
+ C P RP+ ++V+++E I
Sbjct: 301 YDIMKTCWDADPLKRPTFKQIVQLIEKQI 329
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTL--PD--GRLVAVKVMKNLKDNG--EEFINEVASI 252
+++R +G+G + DV++G P+ VA+K KN + E+F+ E ++
Sbjct: 34 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 93
Query: 253 SRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVG 312
+ H +IV +G E +I E G L ++ K +L+ ++ A
Sbjct: 94 RQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR-----KYSLDLASLILYAYQ 147
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT 372
++ L YL + R VH DI N+ + + C K+ DFGL++ E ++ +
Sbjct: 148 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLP 203
Query: 373 AGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVI-------GRKNADV 413
++APE +F + SDV+ +G+ + E+++ G KN DV
Sbjct: 204 IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 249
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTL--PD--GRLVAVKVMKNLKDNG--EEFINEVASI 252
+++R +G+G + DV++G P+ VA+K KN + E+F+ E ++
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 253 SRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVG 312
+ H +IV +G E +I E G L ++ K +L+ ++ A
Sbjct: 66 RQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR-----KYSLDLASLILYAYQ 119
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT 372
++ L YL + R VH DI N+ + + C K+ DFGL++ E ++ +
Sbjct: 120 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLP 175
Query: 373 AGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVI-------GRKNADV 413
++APE +F + SDV+ +G+ + E+++ G KN DV
Sbjct: 176 IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 221
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 139/329 (42%), Gaps = 57/329 (17%)
Query: 186 NYGSLAPKRFSYS---DVRRMTKSFSDKLGQGGYADVYKGTL-----PDGRL-VAVKVMK 236
NY + P + Y + R SF LG G + V + T D + VAVK++K
Sbjct: 21 NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 80
Query: 237 ---NLKDNGEEFINEVASISRT-SHVNIVPFLGFCYEKKKRALIYEFMPNGSL------- 285
+L + E ++E+ +S +H+NIV LG C +I E+ G L
Sbjct: 81 PSAHLTER-EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK 139
Query: 286 -DQYIYDHES----SNGKRTLEWRTVYQIAVGIARGLEYL-HRGCNIRIVHLDIKPHNIR 339
D +I S + + L+ + + +A+G+ +L + C +H D+ NI
Sbjct: 140 RDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNIL 195
Query: 340 LDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGV-SHKSDVYSYG 398
L KI DFGLA+ + +++ + R ++APE F V + +SDV+SYG
Sbjct: 196 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI---FNCVYTFESDVWSYG 252
Query: 399 MMIHEMVIGRKNADVKVSCSSEYFP-----NAIYKQIETEYDFQLDGVVTEEEKEMAKKM 453
+ + E+ S S +P + YK I+ +G + +M
Sbjct: 253 IFLWEL----------FSLGSSPYPGMPVDSKFYKMIK-------EGFRMLSPEHAPAEM 295
Query: 454 ILVSLWCIQTHPPDRPSMTKVVEMLEGSI 482
+ C P RP+ ++V+++E I
Sbjct: 296 YDIMKTCWDADPLKRPTFKQIVQLIEKQI 324
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTL--PD--GRLVAVKVMKNLKDNG--EEFINEVASI 252
+++R +G+G + DV++G P+ VA+K KN + E+F+ E ++
Sbjct: 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 70
Query: 253 SRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVG 312
+ H +IV +G E +I E G L ++ K +L+ ++ A
Sbjct: 71 RQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR-----KYSLDLASLILYAYQ 124
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT 372
++ L YL + R VH DI N+ + + C K+ DFGL++ E ++ +
Sbjct: 125 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLP 180
Query: 373 AGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVI-------GRKNADV 413
++APE +F + SDV+ +G+ + E+++ G KN DV
Sbjct: 181 IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 226
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 201 RRMTKSFSDKLGQGGYADVYKG---TLPDGRLVAVKVMKNLKDN---GEEFINEVASISR 254
R++ +LG G + V KG + VAVK++KN ++ +E + E + +
Sbjct: 25 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 84
Query: 255 TSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIA 314
+ IV +G C E + L+ E G L++Y+ + K +E V+Q+++G
Sbjct: 85 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMG-- 139
Query: 315 RGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFI-SMLDTRGTA 373
++YL VH D+ N+ L KISDFGL+K E++ + +
Sbjct: 140 --MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 194
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHE 403
+ APE C ++ S KSDV+S+G+++ E
Sbjct: 195 KWYAPE--CINYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 201 RRMTKSFSDKLGQGGYADVYKG---TLPDGRLVAVKVMKNLKDN---GEEFINEVASISR 254
R++ +LG G + V KG + VAVK++KN ++ +E + E + +
Sbjct: 25 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 84
Query: 255 TSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIA 314
+ IV +G C E + L+ E G L++Y+ + K +E V+Q+++G
Sbjct: 85 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMG-- 139
Query: 315 RGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFI-SMLDTRGTA 373
++YL VH D+ N+ L KISDFGL+K E++ + +
Sbjct: 140 --MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 194
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHE 403
+ APE C ++ S KSDV+S+G+++ E
Sbjct: 195 KWYAPE--CINYYKFSSKSDVWSFGVLMWE 222
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTL--PD--GRLVAVKVMKNLKDNG--EEFINEVASI 252
+++R +G+G + DV++G P+ VA+K KN + E+F+ E ++
Sbjct: 8 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 67
Query: 253 SRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVG 312
+ H +IV +G E +I E G L ++ K +L+ ++ A
Sbjct: 68 RQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR-----KYSLDLASLILYAYQ 121
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT 372
++ L YL + R VH DI N+ + + C K+ DFGL++ E ++ +
Sbjct: 122 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLP 177
Query: 373 AGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVI-------GRKNADV 413
++APE +F + SDV+ +G+ + E+++ G KN DV
Sbjct: 178 IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 223
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 115/274 (41%), Gaps = 36/274 (13%)
Query: 205 KSFSD--KLGQGGYADVYKG-TLPDGRLVAVKVM----KNLKDNGEEFINEVASISRTSH 257
K FSD ++G G + VY + + +VA+K M K + ++ I EV + + H
Sbjct: 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 74
Query: 258 VNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
N + + G CY ++ A + GS + H K+ L+ + + G +GL
Sbjct: 75 PNTIQYRG-CYLREHTAWLVMEYCLGSASDLLEVH-----KKPLQEVEIAAVTHGALQGL 128
Query: 318 EYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIA 377
YLH + ++H D+K NI L E K+ DFG A F+ GT ++A
Sbjct: 129 AYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------GTPYWMA 179
Query: 378 PEV-FCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
PEV G K DV+S G+ E+ RK ++ S A+Y + E
Sbjct: 180 PEVILAMDEGQYDGKVDVWSLGITCIELA-ERKPPLFNMNAMS-----ALYHIAQNESPA 233
Query: 437 QLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPS 470
G +E + C+Q P DRP+
Sbjct: 234 LQSGHWSEYFRNFVDS-------CLQKIPQDRPT 260
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTL--PD--GRLVAVKVMKNLKDNG--EEFINEVASI 252
+++R +G+G + DV++G P+ VA+K KN + E+F+ E ++
Sbjct: 3 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 62
Query: 253 SRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVG 312
+ H +IV +G E +I E G L ++ K +L+ ++ A
Sbjct: 63 RQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR-----KYSLDLASLILYAYQ 116
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT 372
++ L YL + R VH DI N+ + + C K+ DFGL++ E ++ +
Sbjct: 117 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLP 172
Query: 373 AGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVI-------GRKNADV 413
++APE +F + SDV+ +G+ + E+++ G KN DV
Sbjct: 173 IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 218
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTL--PD--GRLVAVKVMKNLKDNG--EEFINEVASI 252
+++R +G+G + DV++G P+ VA+K KN + E+F+ E ++
Sbjct: 9 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 68
Query: 253 SRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVG 312
+ H +IV +G E +I E G L ++ K +L+ ++ A
Sbjct: 69 RQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR-----KYSLDLASLILYAYQ 122
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT 372
++ L YL + R VH DI N+ + + C K+ DFGL++ E ++ +
Sbjct: 123 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLP 178
Query: 373 AGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVI-------GRKNADV 413
++APE +F + SDV+ +G+ + E+++ G KN DV
Sbjct: 179 IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 224
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTL--PD--GRLVAVKVMKNLKDNG--EEFINEVASI 252
+++R +G+G + DV++G P+ VA+K KN + E+F+ E ++
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 253 SRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVG 312
+ H +IV +G E +I E G L ++ K +L+ ++ A
Sbjct: 66 RQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR-----KYSLDLASLILYAYQ 119
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT 372
++ L YL + R VH DI N+ + + C K+ DFGL++ E ++ +
Sbjct: 120 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLP 175
Query: 373 AGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVI-------GRKNADV 413
++APE +F + SDV+ +G+ + E+++ G KN DV
Sbjct: 176 IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 221
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 25/207 (12%)
Query: 211 LGQGGYADVYKGTLPD-GRLVAVKVMKN----LKDNGEEFINEVASISRTSHVNIVPFLG 265
LG+G + V+ + A+K +K + D+ E + E +S PFL
Sbjct: 26 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH---PFLT 82
Query: 266 --FCYEKKKRALIY--EFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
FC + K L + E++ G L +Y H S K L T Y A I GL++LH
Sbjct: 83 HMFCTFQTKENLFFVMEYLNGGDL---MY-HIQSCHKFDLSRATFY--AAEIILGLQFLH 136
Query: 322 RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF 381
IV+ D+K NI LD+D KI+DFG+ K+ ++ + + GT YIAPE+
Sbjct: 137 SKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN--EFCGTPDYIAPEIL 191
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
+H D +S+G++++EM+IG+
Sbjct: 192 LGQ--KYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 201 RRMTKSFSDKLGQGGYADVYKG---TLPDGRLVAVKVMKNLKDN---GEEFINEVASISR 254
R++ +LG G + V KG + VAVK++KN ++ +E + E + +
Sbjct: 5 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 64
Query: 255 TSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIA 314
+ IV +G C E + L+ E G L++Y+ + K +E V+Q+++G
Sbjct: 65 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMG-- 119
Query: 315 RGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFI-SMLDTRGTA 373
++YL VH D+ N+ L KISDFGL+K E++ + +
Sbjct: 120 --MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 174
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHE 403
+ APE C ++ S KSDV+S+G+++ E
Sbjct: 175 KWYAPE--CINYYKFSSKSDVWSFGVLMWE 202
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 23/205 (11%)
Query: 210 KLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNG---EEFINEVASISRTSHVNIVPFLGF 266
+LG G V+K + LV + + +L+ + I E+ + + IV F G
Sbjct: 16 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 75
Query: 267 CYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNI 326
Y + ++ E M GSLDQ + R E + + ++++ + +GL YL
Sbjct: 76 FYSDGEISICMEHMDGGSLDQVL-----KKAGRIPE-QILGKVSIAVIKGLTYLRE--KH 127
Query: 327 RIVHLDIKPHNIRLDEDFCPKISDFGLAKQT--EKKESFISMLDTRGTAGYIAPEVF-CR 383
+I+H D+KP NI ++ K+ DFG++ Q E F+ GT Y++PE
Sbjct: 128 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV------GTRSYMSPERLQGT 181
Query: 384 HFGGVSHKSDVYSYGMMIHEMVIGR 408
H+ S +SD++S G+ + EM +GR
Sbjct: 182 HY---SVQSDIWSMGLSLVEMAVGR 203
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 100/207 (48%), Gaps = 25/207 (12%)
Query: 211 LGQGGYADVYKGTLPD-GRLVAVKVMKN----LKDNGEEFINEVASISRTSHVNIVPFLG 265
LG+G + V+ + A+K +K + D+ E + E +S PFL
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH---PFLT 81
Query: 266 --FCYEKKKRALIY--EFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
FC + K L + E++ G L +Y H S K L T Y A I GL++LH
Sbjct: 82 HMFCTFQTKENLFFVMEYLNGGDL---MY-HIQSCHKFDLSRATFY--AAEIILGLQFLH 135
Query: 322 RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF 381
IV+ D+K NI LD+D KI+DFG+ K+ ++ + GT YIAPE+
Sbjct: 136 SKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXF--CGTPDYIAPEIL 190
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
+H D +S+G++++EM+IG+
Sbjct: 191 LGQ--KYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 201 RRMTKSFSDKLGQGGYADVYKG---TLPDGRLVAVKVMKNLKDN---GEEFINEVASISR 254
R++ +LG G + V KG + VAVK++KN ++ +E + E + +
Sbjct: 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 74
Query: 255 TSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIA 314
+ IV +G C E + L+ E G L++Y+ + K +E V+Q+++G
Sbjct: 75 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMG-- 129
Query: 315 RGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFI-SMLDTRGTA 373
++YL VH D+ N+ L KISDFGL+K E++ + +
Sbjct: 130 --MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 184
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHE 403
+ APE C ++ S KSDV+S+G+++ E
Sbjct: 185 KWYAPE--CINYYKFSSKSDVWSFGVLMWE 212
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 201 RRMTKSFSDKLGQGGYADVYKG---TLPDGRLVAVKVMKNLKDN---GEEFINEVASISR 254
R++ +LG G + V KG + VAVK++KN ++ +E + E + +
Sbjct: 9 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 68
Query: 255 TSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIA 314
+ IV +G C E + L+ E G L++Y+ + K +E V+Q+++G
Sbjct: 69 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMG-- 123
Query: 315 RGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFI-SMLDTRGTA 373
++YL VH D+ N+ L KISDFGL+K E++ + +
Sbjct: 124 --MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 178
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHE 403
+ APE C ++ S KSDV+S+G+++ E
Sbjct: 179 KWYAPE--CINYYKFSSKSDVWSFGVLMWE 206
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 23/205 (11%)
Query: 210 KLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNG---EEFINEVASISRTSHVNIVPFLGF 266
+LG G V+K + LV + + +L+ + I E+ + + IV F G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 267 CYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNI 326
Y + ++ E M GSLDQ + R E + + ++++ + +GL YL
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVL-----KKAGRIPE-QILGKVSIAVIKGLTYLRE--KH 124
Query: 327 RIVHLDIKPHNIRLDEDFCPKISDFGLAKQT--EKKESFISMLDTRGTAGYIAPEVF-CR 383
+I+H D+KP NI ++ K+ DFG++ Q SF+ GT Y++PE
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPERLQGT 178
Query: 384 HFGGVSHKSDVYSYGMMIHEMVIGR 408
H+ S +SD++S G+ + EM +GR
Sbjct: 179 HY---SVQSDIWSMGLSLVEMAVGR 200
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 201 RRMTKSFSDKLGQGGYADVYKG---TLPDGRLVAVKVMKNLKDN---GEEFINEVASISR 254
R++ +LG G + V KG + VAVK++KN ++ +E + E + +
Sbjct: 23 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 82
Query: 255 TSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIA 314
+ IV +G C E + L+ E G L++Y+ + K +E V+Q+++G
Sbjct: 83 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMG-- 137
Query: 315 RGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFI-SMLDTRGTA 373
++YL VH D+ N+ L KISDFGL+K E++ + +
Sbjct: 138 --MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 192
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHE 403
+ APE C ++ S KSDV+S+G+++ E
Sbjct: 193 KWYAPE--CINYYKFSSKSDVWSFGVLMWE 220
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 201 RRMTKSFSDKLGQGGYADVYKG---TLPDGRLVAVKVMKNLKDN---GEEFINEVASISR 254
R++ +LG G + V KG + VAVK++KN ++ +E + E + +
Sbjct: 3 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 62
Query: 255 TSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIA 314
+ IV +G C E + L+ E G L++Y+ + K +E V+Q+++G
Sbjct: 63 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMG-- 117
Query: 315 RGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFI-SMLDTRGTA 373
++YL VH D+ N+ L KISDFGL+K E++ + +
Sbjct: 118 --MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 172
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHE 403
+ APE C ++ S KSDV+S+G+++ E
Sbjct: 173 KWYAPE--CINYYKFSSKSDVWSFGVLMWE 200
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 125/277 (45%), Gaps = 41/277 (14%)
Query: 211 LGQGGYADVYK-GTLPDGRLVAVKVMKNLKDNGEE---FINEVASISRTSHVNIVPFLGF 266
LG+G + +V K + AVKV+ ++ + EV + + H NI+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 267 CYEKKKRALIYEFMPNGSL-DQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ E G L D+ I S R + Q+ GI Y+H+
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA---RIIKQVFSGIT----YMHKH-- 140
Query: 326 IRIVHLDIKPHNIRL---DEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
IVH D+KP NI L ++D KI DFGL+ ++ M D GTA YIAPEV
Sbjct: 141 -NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVL- 195
Query: 383 RHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIET-EYDFQLDG- 440
G K DV+S G++++ ++ G K +EY I K++ET +Y F L
Sbjct: 196 --RGTYDEKCDVWSAGVILYILLSGTPPFYGK----NEY---DILKRVETGKYAFDLPQW 246
Query: 441 -VVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
++++ K++ +KM+ HP R + T+ +E
Sbjct: 247 RTISDDAKDLIRKMLTF-------HPSLRITATQCLE 276
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 125/277 (45%), Gaps = 41/277 (14%)
Query: 211 LGQGGYADVYK-GTLPDGRLVAVKVMKNLKDNGEE---FINEVASISRTSHVNIVPFLGF 266
LG+G + +V K + AVKV+ ++ + EV + + H NI+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 267 CYEKKKRALIYEFMPNGSL-DQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ E G L D+ I S R + Q+ GI Y+H+
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA---RIIKQVFSGIT----YMHKH-- 140
Query: 326 IRIVHLDIKPHNIRL---DEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
IVH D+KP NI L ++D KI DFGL+ ++ M D GTA YIAPEV
Sbjct: 141 -NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVL- 195
Query: 383 RHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIET-EYDFQLDG- 440
G K DV+S G++++ ++ G K +EY I K++ET +Y F L
Sbjct: 196 --RGTYDEKCDVWSAGVILYILLSGTPPFYGK----NEY---DILKRVETGKYAFDLPQW 246
Query: 441 -VVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
++++ K++ +KM+ HP R + T+ +E
Sbjct: 247 RTISDDAKDLIRKMLTF-------HPSLRITATQCLE 276
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 21/203 (10%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLKDNG---EEFINEVASISRTSHVNIVPFLGF 266
+G+G +A V + G+ VAV+++ + N ++ EV + +H NIV
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 267 CYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNI 326
+K L+ E+ G + Y+ H K E R ++ I ++Y H+
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKFR---QIVSAVQYCHQKF-- 133
Query: 327 RIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR-GTAGYIAPEVF-CRH 384
IVH D+K N+ LD D KI+DFG + + +F + LD G+ Y APE+F +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEF----TFGNKLDEFCGSPPYAAPELFQGKK 188
Query: 385 FGGVSHKSDVYSYGMMIHEMVIG 407
+ G + DV+S G++++ +V G
Sbjct: 189 YDG--PEVDVWSLGVILYTLVSG 209
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 96/214 (44%), Gaps = 32/214 (14%)
Query: 209 DKLGQGGYADV----YKGTLPDGRLVAVKVMKNLKDNG-------EEFINEVASISRTSH 257
++LG G +A V KGT G+ A K +K + + EE EV + H
Sbjct: 18 EELGSGQFAIVRKCRQKGT---GKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRH 74
Query: 258 VNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
NI+ K LI E + G L ++ + ES L Q I G+
Sbjct: 75 PNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES------LTEDEATQFLKQILDGV 128
Query: 318 EYLHRGCNIRIVHLDIKPHNIRLDEDFCP----KISDFGLAKQTEKKESFISMLDTRGTA 373
YLH RI H D+KP NI L + P K+ DFG+A + E F ++ GT
Sbjct: 129 HYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF---GTP 182
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
++APE+ ++ + ++D++S G++ + ++ G
Sbjct: 183 EFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 37/222 (16%)
Query: 211 LGQGGYADVY--KGTLPDGRLVAVKV-MKNLKDNGEEFINEVASISRTSHVNIVPFLGFC 267
LG+GG+ V+ K + D ++ + N + E+ + EV ++++ H IV +
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 268 YEKKKRALIYEFMPNGSLDQYIYDH----------ESSNGKRTLEWR---TVYQIAVGIA 314
EK E + S Y+Y + NG+ T+E R I + IA
Sbjct: 73 LEKN----TTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA 128
Query: 315 RGLEYLH-RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR--- 370
+E+LH +G ++H D+KP NI D K+ DFGL ++ E ++L
Sbjct: 129 EAVEFLHSKG----LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184
Query: 371 -------GTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
GT Y++PE H SHK D++S G+++ E++
Sbjct: 185 ARHTGQVGTKLYMSPEQI--HGNSYSHKVDIFSLGLILFELL 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 207 FSDKLGQGGYADVYKGTLPD-GRLVAVKVMKN--LKDNGEEFINEVASISRTSHVNIVPF 263
++LG GG+ V + D G VA+K + N E + E+ + + +H N+V
Sbjct: 18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 77
Query: 264 LGFCYEKKKRA------LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
+K A L E+ G L +Y+ E+ G + RT+ I+ L
Sbjct: 78 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS---DISSAL 134
Query: 318 EYLHRGCNIRIVHLDIKPHNIRLD---EDFCPKISDFGLAKQTEKKESFISMLDTRGTAG 374
YLH RI+H D+KP NI L + KI D G AK+ ++ E + GT
Sbjct: 135 RYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV---GTLQ 188
Query: 375 YIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
Y+APE+ + V+ D +S+G + E + G
Sbjct: 189 YLAPELLEQKKYTVT--VDYWSFGTLAFECITG 219
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 207 FSDKLGQGGYADVYKGTLPD-GRLVAVKVMKN--LKDNGEEFINEVASISRTSHVNIVPF 263
++LG GG+ V + D G VA+K + N E + E+ + + +H N+V
Sbjct: 19 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 78
Query: 264 LGFCYEKKKRA------LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
+K A L E+ G L +Y+ E+ G + RT+ I+ L
Sbjct: 79 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS---DISSAL 135
Query: 318 EYLHRGCNIRIVHLDIKPHNIRLD---EDFCPKISDFGLAKQTEKKESFISMLDTRGTAG 374
YLH RI+H D+KP NI L + KI D G AK+ ++ E + GT
Sbjct: 136 RYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV---GTLQ 189
Query: 375 YIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
Y+APE+ + V+ D +S+G + E + G
Sbjct: 190 YLAPELLEQKKYTVT--VDYWSFGTLAFECITG 220
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 29/208 (13%)
Query: 210 KLGQGGYADVYK------GTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPF 263
+LG G V+K G + +L+ +++ +++ + I E+ + + IV F
Sbjct: 32 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN---QIIRELQVLHECNSPYIVGF 88
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRG 323
G Y + ++ E M GSLDQ + R E + + ++++ + +GL YL
Sbjct: 89 YGAFYSDGEISICMEHMDGGSLDQVL-----KKAGRIPE-QILGKVSIAVIKGLTYLRE- 141
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT--EKKESFISMLDTRGTAGYIAPEVF 381
+I+H D+KP NI ++ K+ DFG++ Q SF+ GT Y++PE
Sbjct: 142 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPERL 194
Query: 382 -CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
H+ S +SD++S G+ + EM +GR
Sbjct: 195 QGTHY---SVQSDIWSMGLSLVEMAVGR 219
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 125/280 (44%), Gaps = 47/280 (16%)
Query: 211 LGQGGYADVYKGTLPDGRLV----AVKVMKNLKDNGEE---FINEVASISRTSHVNIVPF 263
LG+G + +V K R+ AVKV+ ++ + EV + + H NI+
Sbjct: 30 LGKGSFGEVLKCK---DRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 264 LGFCYEKKKRALIYEFMPNGSL-DQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
+ ++ E G L D+ I ++ +I + G+ Y+H+
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEII-------KRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 323 GCNIRIVHLDIKPHNIRL---DEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
IVH D+KP NI L ++D KI DFGL+ ++ M D GTA YIAPE
Sbjct: 140 H---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPE 193
Query: 380 VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIET-EYDFQL 438
V G K DV+S G++++ ++ G +EY I K++ET +Y F L
Sbjct: 194 VLR---GTYDEKCDVWSAGVILYILLSGTP----PFYGKNEY---DILKRVETGKYAFDL 243
Query: 439 DG--VVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
++++ K++ +KM+ HP R + T+ +E
Sbjct: 244 PQWRTISDDAKDLIRKMLTF-------HPSLRITATQCLE 276
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 32/214 (14%)
Query: 209 DKLGQGGYADV----YKGTLPDGRLVAVKVMKNLKDNG-------EEFINEVASISRTSH 257
++LG G +A V KGT G+ A K +K + + EE EV + H
Sbjct: 11 EELGSGQFAIVRKCRQKGT---GKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRH 67
Query: 258 VNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
NI+ K LI E + G L ++ + ES L Q I G+
Sbjct: 68 PNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES------LTEDEATQFLKQILDGV 121
Query: 318 EYLHRGCNIRIVHLDIKPHNIRLDEDFCP----KISDFGLAKQTEKKESFISMLDTRGTA 373
YLH + RI H D+KP NI L + P K+ DFG+A + E F ++ GT
Sbjct: 122 HYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF---GTP 175
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
++APE+ ++ + ++D++S G++ + ++ G
Sbjct: 176 EFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 207
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 201 RRMTKSFSDKLGQGGYADVYKG---TLPDGRLVAVKVMKNLKDN---GEEFINEVASISR 254
R++ +LG G + V KG + VAVK++KN ++ +E + E + +
Sbjct: 9 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 68
Query: 255 TSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIA 314
+ IV +G C E + L+ E G L++Y+ + K +E V+Q+++G
Sbjct: 69 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMG-- 123
Query: 315 RGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKES-FISMLDTRGTA 373
++YL VH D+ N+ L KISDFGL+K E+ + + +
Sbjct: 124 --MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPV 178
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHE 403
+ APE C ++ S KSDV+S+G+++ E
Sbjct: 179 KWYAPE--CINYYKFSSKSDVWSFGVLMWE 206
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)
Query: 188 GSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLP-DGRLVAVKVMKNLKDNGEEFI 246
G +A K+ V+ D LG G + V G G VAVK++ K + +
Sbjct: 1 GPMAEKQKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVV 60
Query: 247 ----NEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE 302
E+ ++ H +I+ ++ E++ G L YI NG+ L+
Sbjct: 61 GKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYI----CKNGR--LD 114
Query: 303 WRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKES 362
+ ++ I G++Y HR +VH D+KP N+ LD KI+DFGL+ E
Sbjct: 115 EKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE- 170
Query: 363 FISMLDTRGTAGYIAPEVFC-RHFGGVSHKSDVYSYGMMIHEMVIG 407
+ + G+ Y APEV R + G + D++S G++++ ++ G
Sbjct: 171 --FLRXSCGSPNYAAPEVISGRLYAGP--EVDIWSSGVILYALLCG 212
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLSFCHSH- 122
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------TLWYRAP 172
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 173 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 33/221 (14%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCYEKK 271
+G + V+K L + VAVK+ + E+ S H N++ F+ EK+
Sbjct: 24 ARGRFGCVWKAQLMND-FVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIA--AEKR 80
Query: 272 ------KRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR--- 322
+ LI F GSL Y+ + + W + +A ++RGL YLH
Sbjct: 81 GSNLEVELWLITAFHDKGSLTDYLKGN-------IITWNELCHVAETMSRGLSYLHEDVP 133
Query: 323 -----GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIA 377
G I H D K N+ L D ++DFGLA + E + GT Y+A
Sbjct: 134 WCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMA 193
Query: 378 PEVFCRHFGGVSHKS------DVYSYGMMIHEMVIGRKNAD 412
PEV G ++ + D+Y+ G+++ E+V K AD
Sbjct: 194 PEVL---EGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 116/253 (45%), Gaps = 36/253 (14%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E EV S H NI+ G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ ++ + LI E+ P G++ + + + +RT + T +A L Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT------ELANALSYCH---S 130
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ--TEKKESFISMLDTRGTAGYIAPEVFCR 383
R++H DIKP N+ L + KI+DFG + + ++ + LD Y+ PE+
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLD------YLPPEM--- 181
Query: 384 HFGGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGV 441
G H K D++S G++ +E ++G + + Y++I + +F
Sbjct: 182 -IEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET-------YRRI-SRVEFTFPDF 232
Query: 442 VTEEEKEMAKKMI 454
VTE +++ +++
Sbjct: 233 VTEGARDLISRLL 245
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 21/203 (10%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLKDNG---EEFINEVASISRTSHVNIVPFLGF 266
+G+G +A V + GR VAVK++ + N ++ EV + +H NIV
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 267 CYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNI 326
+K L+ E+ G + Y+ H K E R ++ I ++Y H+
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKFR---QIVSAVQYCHQKY-- 134
Query: 327 RIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR-GTAGYIAPEVF-CRH 384
IVH D+K N+ LD D KI+DFG + + + + LDT G+ Y APE+F +
Sbjct: 135 -IVHRDLKAENLLLDGDMNIKIADFGFSNEF----TVGNKLDTFCGSPPYAAPELFQGKK 189
Query: 385 FGGVSHKSDVYSYGMMIHEMVIG 407
+ G + DV+S G++++ +V G
Sbjct: 190 YDG--PEVDVWSLGVILYTLVSG 210
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 70 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLAFCHSH- 123
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 124 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------TLWYRAP 173
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 174 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 202
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 72 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLAFCHSH- 125
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 126 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYRAP 175
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 176 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 71 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLAFCHSH- 124
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 125 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYRAP 174
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 175 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 203
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLAFCHSH- 122
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------TLWYRAP 172
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 173 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLAFCHSH- 122
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYRAP 172
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 173 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLAFCHSH- 121
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 122 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------TLWYRAP 171
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 172 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 200
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLAFCHSH- 121
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 122 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------TLWYRAP 171
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 172 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLAFCHSH- 122
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------TLWYRAP 172
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 173 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 25/228 (10%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTL--PD--GRLVAVKVMKNLKDNG--EEFINEVASI 252
+++R +G+G + DV++G P+ VA+K KN + E+F+ E ++
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 253 SRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVG 312
+ H +IV +G E +I E G L ++ K +L+ ++ A
Sbjct: 66 RQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR-----KFSLDLASLILYAYQ 119
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT 372
++ L YL + R VH DI N+ + C K+ DFGL++ E ++ +
Sbjct: 120 LSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLP 175
Query: 373 AGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVI-------GRKNADV 413
++APE +F + SDV+ +G+ + E+++ G KN DV
Sbjct: 176 IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 221
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 71 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLAFCH--- 122
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
+ R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYRAP 174
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 175 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLAFCHSH- 122
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYRAP 172
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 173 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLAFCHSH- 121
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 122 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYRAP 171
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 172 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 200
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 70 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLAFCHSH- 123
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 124 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYRAP 173
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 174 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 202
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 21/203 (10%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLKDNG---EEFINEVASISRTSHVNIVPFLGF 266
+G+G +A V + G+ VAVK++ + N ++ EV +H NIV
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 267 CYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNI 326
+K L+ E+ G + Y+ H K E R ++ I ++Y H+
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEK---EARAKFR---QIVSAVQYCHQKF-- 133
Query: 327 RIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR-GTAGYIAPEVF-CRH 384
IVH D+K N+ LD D KI+DFG + + +F + LD G Y APE+F +
Sbjct: 134 -IVHRDLKAENLLLDADXNIKIADFGFSNEF----TFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 385 FGGVSHKSDVYSYGMMIHEMVIG 407
+ G + DV+S G++++ +V G
Sbjct: 189 YDG--PEVDVWSLGVILYTLVSG 209
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLAFCHSH- 121
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 122 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYRAP 171
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 172 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 200
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 72 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLAFCH--- 123
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
+ R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYRAP 175
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 176 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 204
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLAFCHSH- 122
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYRAP 172
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 173 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 72
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 73 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLAFCH--- 124
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
+ R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 125 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYRAP 176
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 177 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 205
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 17/200 (8%)
Query: 227 GRLVAVKVMKNL-KDNGEEFINEVASISRTSHVNIVPFLGFCYE--KKKRALIYEFMPNG 283
G LVAVK +++ D +F E+ + IV + G Y + + L+ E++P+G
Sbjct: 36 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSG 95
Query: 284 SLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDED 343
L ++ H + L+ + + I +G+EYL + R VH D+ NI ++ +
Sbjct: 96 CLRDFLQRHRA-----RLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESE 147
Query: 344 FCPKISDFGLAKQTE-KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIH 402
KI+DFGLAK K+ + + + APE + S +SDV+S+G++++
Sbjct: 148 AHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNI--FSRQSDVWSFGVVLY 205
Query: 403 EMVIGRKNADVKVSCSSEYF 422
E+ D S S+E+
Sbjct: 206 ELFT---YCDKSCSPSAEFL 222
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF L Q + ++ + + + +GL + H
Sbjct: 72 DVIHTENKLYLVFEF-----LHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH--- 123
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
+ R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYRAP 175
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 176 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 204
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTL--PD--GRLVAVKVMKNLKDNG--EEFINEVASI 252
+++R +G+G + DV++G P+ VA+K KN + E+F+ E ++
Sbjct: 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 445
Query: 253 SRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVG 312
+ H +IV +G E +I E G L ++ K +L+ ++ A
Sbjct: 446 RQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR-----KFSLDLASLILYAYQ 499
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT 372
++ L YL + R VH DI N+ + + C K+ DFGL++ E ++ +
Sbjct: 500 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TYYKASKGKLP 555
Query: 373 AGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVI-------GRKNADV 413
++APE +F + SDV+ +G+ + E+++ G KN DV
Sbjct: 556 IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 601
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLAFCHSH- 122
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYRAP 172
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 173 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 76 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLAFCH--- 127
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
+ R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 128 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------TLWYRAP 179
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 180 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 208
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ S+D + S+ L Y + +GL + H
Sbjct: 70 DVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQ--LLQGLAFCHSH- 123
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 124 --RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYRAP 173
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 174 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 202
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 25/211 (11%)
Query: 207 FSDKLGQGGYADVYKGTLPDGRLVAV-KVMKNL-KDNG----EEFINEVASISRTSHVNI 260
F KLG G + DV+ L + R + +V+K + KD E+ E+ + H NI
Sbjct: 26 FKRKLGSGAFGDVH---LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNI 82
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ + ++ E G L + I ++ + L V ++ + L Y
Sbjct: 83 IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARG--KALSEGYVAELMKQMMNALAYF 140
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP----KISDFGLAKQTEKKESFISMLDTRGTAGYI 376
H + +VH D+KP NI L +D P KI DFGLA+ + E + GTA Y+
Sbjct: 141 H---SQHVVHKDLKPENI-LFQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYM 193
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
APEVF R V+ K D++S G++++ ++ G
Sbjct: 194 APEVFKR---DVTFKCDIWSAGVVMYFLLTG 221
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ S+D + S+ L Y + +GL + H
Sbjct: 72 DVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQ--LLQGLAFCHSH- 125
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 126 --RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYRAP 175
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 176 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 204
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 70 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLAFCHSH- 123
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 124 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYRAP 173
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 174 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 202
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 72
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 73 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLAFCH--- 124
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
+ R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 125 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------TLWYRAP 176
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 177 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 205
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 70 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLAFCH--- 121
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
+ R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 122 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYRAP 173
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 174 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 202
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 25/228 (10%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTL--PD--GRLVAVKVMKNLKDNG--EEFINEVASI 252
+++R +G+G + DV++G P+ VA+K KN + E+F+ E ++
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 253 SRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVG 312
+ H +IV +G E +I E G L ++ K +L+ ++ A
Sbjct: 66 RQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR-----KFSLDLASLILYAYQ 119
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT 372
++ L YL + R VH DI N+ + + C K+ DFGL++ E + +
Sbjct: 120 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-TXXKASKGKLP 175
Query: 373 AGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVI-------GRKNADV 413
++APE +F + SDV+ +G+ + E+++ G KN DV
Sbjct: 176 IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 221
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 70
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 71 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLAFCHSH- 124
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 125 --RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYRAP 174
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 175 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 203
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 32/214 (14%)
Query: 209 DKLGQGGYADV----YKGTLPDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSH 257
++LG G +A V KGT G+ A K +K + + EE EV + H
Sbjct: 32 EELGSGQFAIVRKCRQKGT---GKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRH 88
Query: 258 VNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
NI+ K LI E + G L ++ + ES L Q I G+
Sbjct: 89 PNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES------LTEDEATQFLKQILDGV 142
Query: 318 EYLHRGCNIRIVHLDIKPHNIRLDEDFCP----KISDFGLAKQTEKKESFISMLDTRGTA 373
YLH + RI H D+KP NI L + P K+ DFG+A + E F ++ GT
Sbjct: 143 HYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF---GTP 196
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
++APE+ ++ + ++D++S G++ + ++ G
Sbjct: 197 EFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 228
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAV-KVMKNLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+ K+ + + G I E++ + +H NIV L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLAFCHSH- 122
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------TLWYRAP 172
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 173 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAV-KVMKNLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+ K+ + + G I E++ + +H NIV L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLAFCHSH- 121
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 122 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------TLWYRAP 171
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 172 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 200
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 26/213 (12%)
Query: 209 DKLGQGGYADVYKGTLPDGR-LVAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPFLG 265
D++G+G + +VYKG + +VA+K+ ++ +D E+ E+ +S+ I + G
Sbjct: 25 DRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ K +I E++ GS + LE + I I +GL+YLH +
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLL-------KPGPLEETYIATILREILKGLDYLH---S 134
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTE----KKESFISMLDTRGTAGYIAPEVF 381
R +H DIK N+ L E K++DFG+A Q K+ F+ GT ++APEV
Sbjct: 135 ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV------GTPFWMAPEVI 188
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGR-KNADV 413
+ K+D++S G+ E+ G N+D+
Sbjct: 189 KQ--SAYDFKADIWSLGITAIELAKGEPPNSDL 219
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 119/273 (43%), Gaps = 39/273 (14%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E E+ S H NI+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ +++K+ L+ EF P G L + + H + +R+ + +A L Y H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME------ELADALHYCHER-- 133
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
+++H DIKP N+ + KI+DFG + + GT Y+ PE+
Sbjct: 134 -KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPEM----I 184
Query: 386 GGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVT 443
G +H K D++ G++ +E ++G D + +++I D + ++
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET-------HRRI-VNVDLKFPPFLS 236
Query: 444 EEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
+ K++ K+ ++ HPP R + V+E
Sbjct: 237 DGSKDLISKL-------LRYHPPQRLPLKGVME 262
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 119/273 (43%), Gaps = 39/273 (14%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E E+ S H NI+
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ +++K+ L+ EF P G L + + H + +R+ + +A L Y H
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME------ELADALHYCHER-- 134
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
+++H DIKP N+ + KI+DFG + + GT Y+ PE+
Sbjct: 135 -KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPEM----I 185
Query: 386 GGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVT 443
G +H K D++ G++ +E ++G D + +++I D + ++
Sbjct: 186 EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET-------HRRI-VNVDLKFPPFLS 237
Query: 444 EEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
+ K++ K+ ++ HPP R + V+E
Sbjct: 238 DGSKDLISKL-------LRYHPPQRLPLKGVME 263
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 201 RRMTKSFSDKLGQGGYADVYKG---TLPDGRLVAVKVMKNLKDN---GEEFINEVASISR 254
R++ +LG G + V KG + VAVK++KN ++ +E + E + +
Sbjct: 367 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 426
Query: 255 TSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIA 314
+ IV +G C E + L+ E G L++Y+ + K +E V+Q+++G
Sbjct: 427 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMG-- 481
Query: 315 RGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFI-SMLDTRGTA 373
++YL VH D+ N+ L KISDFGL+K E++ + +
Sbjct: 482 --MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 536
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHE 403
+ APE C ++ S KSDV+S+G+++ E
Sbjct: 537 KWYAPE--CINYYKFSSKSDVWSFGVLMWE 564
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 119/273 (43%), Gaps = 39/273 (14%)
Query: 211 LGQGGYADVYKGTLPDGRLV-AVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY + + A+KV+ L+ G E E+ S H NI+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ +++K+ L+ EF P G L + + H + +R+ + +A L Y H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME------ELADALHYCHER-- 133
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
+++H DIKP N+ + KI+DFG + + GT Y+ PE+
Sbjct: 134 -KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPEM----I 184
Query: 386 GGVSH--KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGVVT 443
G +H K D++ G++ +E ++G D + +++I D + ++
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET-------HRRI-VNVDLKFPPFLS 236
Query: 444 EEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
+ K++ K+ ++ HPP R + V+E
Sbjct: 237 DGSKDLISKL-------LRYHPPQRLPLKGVME 262
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 206 SFSDK-LGQGGYADVYKGTLPD---GRL-VAVKVMKNLKD--NGEEFINEVASISRTSHV 258
+ SD+ +G+G + VY G D R+ A+K + + + E F+ E + +H
Sbjct: 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHP 82
Query: 259 NIVPFLGFCYEKKKRA-LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
N++ +G + ++ +M +G L Q+I + +R + + + +ARG+
Sbjct: 83 NVLALIGIMLPPEGLPHVLLPYMCHGDLLQFI-----RSPQRNPTVKDLISFGLQVARGM 137
Query: 318 EYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKE--SFISMLDTRGTAGY 375
EYL + VH D+ N LDE F K++DFGLA+ +E S R +
Sbjct: 138 EYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKW 194
Query: 376 IAPEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
A E + + KSDV+S+G+++ E++
Sbjct: 195 TALESLQTY--RFTTKSDVWSFGVLLWELL 222
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 201 RRMTKSFSDKLGQGGYADVYKG---TLPDGRLVAVKVMKNLKDN---GEEFINEVASISR 254
R++ +LG G + V KG + VAVK++KN ++ +E + E + +
Sbjct: 368 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQ 427
Query: 255 TSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIA 314
+ IV +G C E + L+ E G L++Y+ + K +E V+Q+++G
Sbjct: 428 LDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE--LVHQVSMG-- 482
Query: 315 RGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFI-SMLDTRGTA 373
++YL VH D+ N+ L KISDFGL+K E++ + +
Sbjct: 483 --MKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPV 537
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHE 403
+ APE C ++ S KSDV+S+G+++ E
Sbjct: 538 KWYAPE--CINYYKFSSKSDVWSFGVLMWE 565
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 28/210 (13%)
Query: 210 KLGQGGYADVYKGTLP-DGRLVAVKVMK--NLKDNGEEF----INEVASISRTS---HVN 259
++G G Y VYK P G VA+K ++ N G + EVA + R H N
Sbjct: 16 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 260 IVPFLGFCYEKK-----KRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIA 314
+V + C + K L++E +DQ + + L T+ +
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFE-----HVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 130
Query: 315 RGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAG 374
RGL++LH C IVH D+KP NI + K++DFGLA+ + + ++ T
Sbjct: 131 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVV---VTLW 184
Query: 375 YIAPEVFCRHFGGVSHKSDVYSYGMMIHEM 404
Y APEV + + D++S G + EM
Sbjct: 185 YRAPEVLLQ--STYATPVDMWSVGCIFAEM 212
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 211 LGQGGYADVYKGTL-PDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGF 266
LG+GG+ +V+ + G+L A K + + G + I H + L +
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 267 CYEKKKR-ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+E K L+ M G + +IY+ + N E R ++ A I GLE+LH+
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ-EPRAIFYTAQ-IVSGLEHLHQR-- 308
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
I++ D+KP N+ LD+D +ISD GLA E K GT G++APE+
Sbjct: 309 -NIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGE- 364
Query: 386 GGVSHKSDVYSYGMMIHEMVIGR 408
D ++ G+ ++EM+ R
Sbjct: 365 -EYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 211 LGQGGYADVYKGTL-PDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGF 266
LG+GG+ +V+ + G+L A K + + G + I H + L +
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 267 CYEKKKR-ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+E K L+ M G + +IY+ + N E R ++ A I GLE+LH+
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ-EPRAIFYTAQ-IVSGLEHLHQR-- 308
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
I++ D+KP N+ LD+D +ISD GLA E K GT G++APE+
Sbjct: 309 -NIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGE- 364
Query: 386 GGVSHKSDVYSYGMMIHEMVIGR 408
D ++ G+ ++EM+ R
Sbjct: 365 -EYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 211 LGQGGYADVYKGTL-PDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGF 266
LG+GG+ +V+ + G+L A K + + G + I H + L +
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 267 CYEKKKR-ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+E K L+ M G + +IY+ + N E R ++ A I GLE+LH+
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ-EPRAIFYTAQ-IVSGLEHLHQR-- 308
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
I++ D+KP N+ LD+D +ISD GLA E K GT G++APE+
Sbjct: 309 -NIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGE- 364
Query: 386 GGVSHKSDVYSYGMMIHEMVIGR 408
D ++ G+ ++EM+ R
Sbjct: 365 -EYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 211 LGQGGYADVYKGTL-PDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGF 266
LG+GG+ +V+ + G+L A K + + G + I H + L +
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 267 CYEKKKR-ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+E K L+ M G + +IY+ + N E R ++ A I GLE+LH+
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ-EPRAIFYTAQ-IVSGLEHLHQR-- 308
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
I++ D+KP N+ LD+D +ISD GLA E K GT G++APE+
Sbjct: 309 -NIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGE- 364
Query: 386 GGVSHKSDVYSYGMMIHEMVIGR 408
D ++ G+ ++EM+ R
Sbjct: 365 -EYDFSVDYFALGVTLYEMIAAR 386
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 131/306 (42%), Gaps = 54/306 (17%)
Query: 206 SFSDKLGQGGYADVYKGTL-----PDGRL-VAVKVMK---NLKDNGEEFINEVASISRT- 255
SF LG G + V + T D + VAVK++K +L + E ++E+ +S
Sbjct: 42 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER-EALMSELKVLSYLG 100
Query: 256 SHVNIVPFLGFCYEKKKRALIYEFMPNGSL--------DQYIYDHES----SNGKRTLEW 303
+H+NIV LG C +I E+ G L D +I S + + L+
Sbjct: 101 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 160
Query: 304 RTVYQIAVGIARGLEYL-HRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKES 362
+ + +A+G+ +L + C +H D+ NI L KI DFGLA+ + +
Sbjct: 161 EDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSN 216
Query: 363 FISMLDTRGTAGYIAPEVFCRHFGGV-SHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEY 421
++ + R ++APE F V + +SDV+SYG+ + E+ S S
Sbjct: 217 YVVKGNARLPVKWMAPESI---FNCVYTFESDVWSYGIFLWEL----------FSLGSSP 263
Query: 422 FP-----NAIYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
+P + YK I+ +G + +M + C P RP+ ++V+
Sbjct: 264 YPGMPVDSKFYKMIK-------EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 316
Query: 477 MLEGSI 482
++E I
Sbjct: 317 LIEKQI 322
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 207 FSDKLGQGGYADVYKGTLP-DGRLVAVKVMKNLKDNGEEFI----NEVASISRTSHVNIV 261
D LG G + V G G VAVK++ K + + E+ ++ H +I+
Sbjct: 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHII 74
Query: 262 PFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
++ E++ G L YI H +E R ++Q I ++Y H
Sbjct: 75 KLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVE---EMEARRLFQ---QILSAVDYCH 128
Query: 322 RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF 381
R +VH D+KP N+ LD KI+DFGL+ E + + G+ Y APEV
Sbjct: 129 RHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT---SCGSPNYAAPEVI 182
Query: 382 C-RHFGGVSHKSDVYSYGMMIHEMVIG 407
R + G + D++S G++++ ++ G
Sbjct: 183 SGRLYAGP--EVDIWSCGVILYALLCG 207
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 210 KLGQGGYADVYKGT-LPDGRLVAVKVMKNLKDNGEE---FINEVASISRTSHVNIVPFLG 265
+LG+G Y V K +P G+++AVK ++ ++ E+ ++ S+ V F G
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ + + E M + SLD++ Y G +T+ + +IAV I + LE+LH
Sbjct: 74 ALFREGDVWICMELM-DTSLDKF-YKQVIDKG-QTIPEDILGKIAVSIVKALEHLH--SK 128
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
+ ++H D+KP N+ ++ K+ DFG++ + +D G Y+APE
Sbjct: 129 LSVIHRDVKPSNVLINALGQVKMCDFGISGYL--VDDVAKDIDA-GCKPYMAPERINPEL 185
Query: 386 G--GVSHKSDVYSYGMMIHEMVIGR 408
G S KSD++S G+ + E+ I R
Sbjct: 186 NQKGYSVKSDIWSLGITMIELAILR 210
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 119/281 (42%), Gaps = 34/281 (12%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKD----NGEEFINEVASISRTSHVNIV 261
+F KL + +++KG G + VKV+K ++D +F E + SH N++
Sbjct: 13 NFLTKLNENHSGELWKGRW-QGNDIVVKVLK-VRDWSTRKSRDFNEECPRLRIFSHPNVL 70
Query: 262 PFLGFCYEKKK--RALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
P LG C LI +MP GSL Y HE +N ++ + A+ +ARG+ +
Sbjct: 71 PVLGACQSPPAPHPTLITHWMPYGSL--YNVLHEGTNF--VVDQSQAVKFALDMARGMAF 126
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I + ++ +DED +IS + K SF S A ++APE
Sbjct: 127 LH-TLEPLIPRHALNSRSVMIDEDMTARIS------MADVKFSFQSPGRMYAPA-WVAPE 178
Query: 380 VFCRHFGGVSHKS-DVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQL 438
+ + +S D++S+ +++ E+V + P A +E L
Sbjct: 179 ALQKKPEDTNRRSADMWSFAVLLWELV-------------TREVPFADLSNMEIGMKVAL 225
Query: 439 DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
+G+ ++ + + C+ P RP +V +LE
Sbjct: 226 EGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILE 266
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 104/228 (45%), Gaps = 25/228 (10%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYKGTL--PD--GRLVAVKVMKNLKDNG--EEFINEVASI 252
+++R +G+G + DV++G P+ VA+K KN + E+F+ E ++
Sbjct: 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 445
Query: 253 SRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVG 312
+ H +IV +G E +I E G L ++ K +L+ ++ A
Sbjct: 446 RQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR-----KFSLDLASLILYAYQ 499
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT 372
++ L YL + R VH DI N+ + C K+ DFGL++ E ++ +
Sbjct: 500 LSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDS-TYYKASKGKLP 555
Query: 373 AGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVI-------GRKNADV 413
++APE +F + SDV+ +G+ + E+++ G KN DV
Sbjct: 556 IKWMAPESI--NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 601
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 26/211 (12%)
Query: 209 DKLGQGGYADVYK-GTLPDGRLVAVKVMKNLKDNG-------EEFINEVASISRTSHVNI 260
++LG G +A V K G A K +K + E+ EV+ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ K LI E + G L ++ + ES + E+ I G+ YL
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK------QILNGVYYL 130
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP----KISDFGLAKQTEKKESFISMLDTRGTAGYI 376
H +++I H D+KP NI L + P KI DFGLA + + F ++ GT ++
Sbjct: 131 H---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPAFV 184
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
APE+ ++ + ++D++S G++ + ++ G
Sbjct: 185 APEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 71
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++E +DQ + ++ + + + +GL + H
Sbjct: 72 DVIHTENKLYLVFE-----HVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH--- 123
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
+ R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--------TLWYRAP 175
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 176 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 204
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 210 KLGQGGYADVYKGTLPDGRL---VAVKVMKN--LKDNGEEFINEVASISRTSHVNIVPFL 264
+LG G + V +G + VA+KV+K K + EE + E + + + IV +
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRT-LEWRTVYQIAVGIARGLEYLHRG 323
G C + + L+ E G L +++ GKR + V ++ ++ G++YL
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHKFLV------GKREEIPVSNVAELLHQVSMGMKYLEEK 129
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT-RGTAGYIAPEVFC 382
VH D+ N+ L KISDFGL+K +S+ + + + APE C
Sbjct: 130 ---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE--C 184
Query: 383 RHFGGVSHKSDVYSYGMMIHEMV 405
+F S +SDV+SYG+ + E +
Sbjct: 185 INFRKFSSRSDVWSYGVTMWEAL 207
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 30/210 (14%)
Query: 210 KLGQGGYADVYKG--TLPDGRLVAVKVMKNLKDNGEE-----FINEVASISRTS---HVN 259
++G+G Y V+K GR VA+K ++ GEE I EVA + H N
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVR--VQTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 260 IVPFLGFCY-----EKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIA 314
+V C + K L++E + + L Y+ D G T T+ + +
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPT---ETIKDMMFQLL 130
Query: 315 RGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAG 374
RGL++LH + R+VH D+KP NI + K++DFGLA+ + + S++ T
Sbjct: 131 RGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV---VTLW 184
Query: 375 YIAPEVFCRHFGGVSHKSDVYSYGMMIHEM 404
Y APEV + + D++S G + EM
Sbjct: 185 YRAPEVLLQ--SSYATPVDLWSVGCIFAEM 212
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 100/220 (45%), Gaps = 38/220 (17%)
Query: 202 RMTKSFSDKLGQGGYADVY--KGTLPDGRLVAVKVMKN---LKDNGEEFINEVASISRTS 256
R T F + LG G +++V+ K L G+L A+K +K +D+ E NE+A + +
Sbjct: 8 RKTFIFMEVLGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLE--NEIAVLKKIK 64
Query: 257 HVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQ------IA 310
H NIV L+ + + G L +D R LE R VY +
Sbjct: 65 HENIVTLEDIYESTTHYYLVMQLVSGGEL----FD-------RILE-RGVYTEKDASLVI 112
Query: 311 VGIARGLEYLHRGCNIRIVHLDIKPHNIRL---DEDFCPKISDFGLAKQTEKKESFISML 367
+ ++YLH IVH D+KP N+ +E+ I+DFGL+K + M
Sbjct: 113 QQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMS 165
Query: 368 DTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
GT GY+APEV + S D +S G++ + ++ G
Sbjct: 166 TACGTPGYVAPEVLAQK--PYSKAVDCWSIGVITYILLCG 203
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 30/210 (14%)
Query: 210 KLGQGGYADVYKG--TLPDGRLVAVKVMKNLKDNGEE-----FINEVASISRTS---HVN 259
++G+G Y V+K GR VA+K ++ GEE I EVA + H N
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRV--QTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 260 IVPFLGFCY-----EKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIA 314
+V C + K L++E + + L Y+ D G T T+ + +
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPT---ETIKDMMFQLL 130
Query: 315 RGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAG 374
RGL++LH + R+VH D+KP NI + K++DFGLA+ + + S++ T
Sbjct: 131 RGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV---VTLW 184
Query: 375 YIAPEVFCRHFGGVSHKSDVYSYGMMIHEM 404
Y APEV + + D++S G + EM
Sbjct: 185 YRAPEVLLQ--SSYATPVDLWSVGCIFAEM 212
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 30/210 (14%)
Query: 210 KLGQGGYADVYKG--TLPDGRLVAVKVMKNLKDNGEE-----FINEVASISRTS---HVN 259
++G+G Y V+K GR VA+K ++ GEE I EVA + H N
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRV--QTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 260 IVPFLGFCY-----EKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIA 314
+V C + K L++E + + L Y+ D G T T+ + +
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPT---ETIKDMMFQLL 130
Query: 315 RGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAG 374
RGL++LH + R+VH D+KP NI + K++DFGLA+ + + S++ T
Sbjct: 131 RGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVV---VTLW 184
Query: 375 YIAPEVFCRHFGGVSHKSDVYSYGMMIHEM 404
Y APEV + + D++S G + EM
Sbjct: 185 YRAPEVLLQ--SSYATPVDLWSVGCIFAEM 212
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 17/170 (10%)
Query: 243 EEFINEVASISRTS-HVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTL 301
E + EV + + S H NI+ L+++ M G L Y+ + K TL
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE------KVTL 121
Query: 302 EWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKE 361
+ +I + + LH+ + IVH D+KP NI LD+D K++DFG + Q + E
Sbjct: 122 SEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE 178
Query: 362 SFISMLDTRGTAGYIAPEVF-CR---HFGGVSHKSDVYSYGMMIHEMVIG 407
S+ GT Y+APE+ C + G + D++S G++++ ++ G
Sbjct: 179 KLRSVC---GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 26/211 (12%)
Query: 209 DKLGQGGYADVYK-GTLPDGRLVAVKVMKNLKDNG-------EEFINEVASISRTSHVNI 260
++LG G +A V K G A K +K + E+ EV+ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ K LI E + G L ++ + ES + E+ I G+ YL
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK------QILNGVYYL 130
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP----KISDFGLAKQTEKKESFISMLDTRGTAGYI 376
H +++I H D+KP NI L + P KI DFGLA + + F ++ GT ++
Sbjct: 131 H---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFV 184
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
APE+ ++ + ++D++S G++ + ++ G
Sbjct: 185 APEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 25/182 (13%)
Query: 300 TLEWRTVYQIAVGIARGLEYL-HRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTE 358
TLE Y V A+G+E+L R C +H D+ NI L E KI DFGLA+
Sbjct: 189 TLEHLICYSFQV--AKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIY 242
Query: 359 KKESFISMLDTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSC 417
K ++ D R ++APE +F R + + +SDV+S+G+++ E+ S
Sbjct: 243 KDPDYVRKGDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI----------FSL 289
Query: 418 SSEYFPNAIYKQIETEYDFQL-DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
+ +P +I+ E+ +L +G +M L C P RP+ +++VE
Sbjct: 290 GASPYPGV---KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 346
Query: 477 ML 478
L
Sbjct: 347 HL 348
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 26/211 (12%)
Query: 209 DKLGQGGYADVYK-GTLPDGRLVAVKVMKNLKDNG-------EEFINEVASISRTSHVNI 260
++LG G +A V K G A K +K + E+ EV+ + H N+
Sbjct: 17 EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ K LI E + G L ++ + ES + E+ I G+ YL
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK------QILNGVYYL 130
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP----KISDFGLAKQTEKKESFISMLDTRGTAGYI 376
H +++I H D+KP NI L + P KI DFGLA + + F ++ GT ++
Sbjct: 131 H---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFV 184
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
APE+ ++ + ++D++S G++ + ++ G
Sbjct: 185 APEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 123/277 (44%), Gaps = 43/277 (15%)
Query: 209 DKLGQGGYADVYKGTLPDGR---LVAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPF 263
+K+G+G + +V+KG D R +VA+K+ ++ +D E+ E+ +S+ + +
Sbjct: 33 EKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKY 90
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRG 323
G + K +I E++ GS + L+ + I I +GL+YLH
Sbjct: 91 YGSYLKDTKLWIIMEYLGGGSALDLLEPG-------PLDETQIATILREILKGLDYLHSE 143
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTE----KKESFISMLDTRGTAGYIAPE 379
+ +H DIK N+ L E K++DFG+A Q K+ +F+ GT ++APE
Sbjct: 144 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV------GTPFWMAPE 194
Query: 380 VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLD 439
V + K+D++S G+ E+ G SE P + I L+
Sbjct: 195 VIKQ--SAYDSKADIWSLGITAIELARGE-------PPHSELHPMKVLFLIPKNNPPTLE 245
Query: 440 GVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
G ++ KE + C+ P RP+ ++++
Sbjct: 246 GNYSKPLKEFVEA-------CLNKEPSFRPTAKELLK 275
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 25/182 (13%)
Query: 300 TLEWRTVYQIAVGIARGLEYL-HRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTE 358
TLE Y V A+G+E+L R C +H D+ NI L E KI DFGLA+
Sbjct: 191 TLEHLICYSFQV--AKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIY 244
Query: 359 KKESFISMLDTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSC 417
K ++ D R ++APE +F R + + +SDV+S+G+++ E+ S
Sbjct: 245 KDPDYVRKGDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI----------FSL 291
Query: 418 SSEYFPNAIYKQIETEYDFQL-DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
+ +P +I+ E+ +L +G +M L C P RP+ +++VE
Sbjct: 292 GASPYPGV---KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 348
Query: 477 ML 478
L
Sbjct: 349 HL 350
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 25/182 (13%)
Query: 300 TLEWRTVYQIAVGIARGLEYL-HRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTE 358
TLE Y V A+G+E+L R C +H D+ NI L E KI DFGLA+
Sbjct: 198 TLEHLICYSFQV--AKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIY 251
Query: 359 KKESFISMLDTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSC 417
K ++ D R ++APE +F R + + +SDV+S+G+++ E+ S
Sbjct: 252 KDPDYVRKGDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI----------FSL 298
Query: 418 SSEYFPNAIYKQIETEYDFQL-DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
+ +P +I+ E+ +L +G +M L C P RP+ +++VE
Sbjct: 299 GASPYPGV---KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 355
Query: 477 ML 478
L
Sbjct: 356 HL 357
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 26/211 (12%)
Query: 209 DKLGQGGYADVYK-GTLPDGRLVAVKVMKNLKDNG-------EEFINEVASISRTSHVNI 260
++LG G +A V K G A K +K + E+ EV+ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ K LI E + G L ++ + ES + E+ I G+ YL
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK------QILNGVYYL 130
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP----KISDFGLAKQTEKKESFISMLDTRGTAGYI 376
H +++I H D+KP NI L + P KI DFGLA + + F ++ GT ++
Sbjct: 131 H---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFV 184
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
APE+ ++ + ++D++S G++ + ++ G
Sbjct: 185 APEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 26/211 (12%)
Query: 209 DKLGQGGYADVYK-GTLPDGRLVAVKVMKNLKDNG-------EEFINEVASISRTSHVNI 260
++LG G +A V K G A K +K + E+ EV+ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ K LI E + G L ++ + ES + E+ I G+ YL
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK------QILNGVYYL 130
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP----KISDFGLAKQTEKKESFISMLDTRGTAGYI 376
H +++I H D+KP NI L + P KI DFGLA + + F ++ GT ++
Sbjct: 131 H---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFV 184
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
APE+ ++ + ++D++S G++ + ++ G
Sbjct: 185 APEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 25/182 (13%)
Query: 300 TLEWRTVYQIAVGIARGLEYL-HRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTE 358
TLE Y V A+G+E+L R C +H D+ NI L E KI DFGLA+
Sbjct: 196 TLEHLICYSFQV--AKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIY 249
Query: 359 KKESFISMLDTRGTAGYIAPE-VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSC 417
K ++ D R ++APE +F R + + +SDV+S+G+++ E+ S
Sbjct: 250 KDPDYVRKGDARLPLKWMAPETIFDRVY---TIQSDVWSFGVLLWEI----------FSL 296
Query: 418 SSEYFPNAIYKQIETEYDFQL-DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
+ +P +I+ E+ +L +G +M L C P RP+ +++VE
Sbjct: 297 GASPYPGV---KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 353
Query: 477 ML 478
L
Sbjct: 354 HL 355
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 26/211 (12%)
Query: 209 DKLGQGGYADVYK-GTLPDGRLVAVKVMKNLKDNG-------EEFINEVASISRTSHVNI 260
++LG G +A V K G A K +K + E+ EV+ + H N+
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ K LI E + G L ++ + ES + E+ I G+ YL
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK------QILNGVYYL 129
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP----KISDFGLAKQTEKKESFISMLDTRGTAGYI 376
H +++I H D+KP NI L + P KI DFGLA + + F ++ GT ++
Sbjct: 130 H---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFV 183
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
APE+ ++ + ++D++S G++ + ++ G
Sbjct: 184 APEIV--NYEPLGLEADMWSIGVITYILLSG 212
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 26/211 (12%)
Query: 209 DKLGQGGYADVYK-GTLPDGRLVAVKVMKNLKDNG-------EEFINEVASISRTSHVNI 260
++LG G +A V K G A K +K + E+ EV+ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ K LI E + G L ++ + ES + E+ I G+ YL
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK------QILNGVYYL 130
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP----KISDFGLAKQTEKKESFISMLDTRGTAGYI 376
H +++I H D+KP NI L + P KI DFGLA + + F ++ GT ++
Sbjct: 131 H---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFV 184
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
APE+ ++ + ++D++S G++ + ++ G
Sbjct: 185 APEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 26/211 (12%)
Query: 209 DKLGQGGYADVYK-GTLPDGRLVAVKVMKNLKDNG-------EEFINEVASISRTSHVNI 260
++LG G +A V K G A K +K + E+ EV+ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ K LI E + G L ++ + ES + E+ I G+ YL
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK------QILNGVYYL 130
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP----KISDFGLAKQTEKKESFISMLDTRGTAGYI 376
H +++I H D+KP NI L + P KI DFGLA + + F ++ GT ++
Sbjct: 131 H---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFV 184
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
APE+ ++ + ++D++S G++ + ++ G
Sbjct: 185 APEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 26/211 (12%)
Query: 209 DKLGQGGYADVYK-GTLPDGRLVAVKVMKNLKDNG-------EEFINEVASISRTSHVNI 260
++LG G +A V K G A K +K + E+ EV+ + H N+
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ K LI E + G L ++ + ES + E+ I G+ YL
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK------QILNGVYYL 129
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP----KISDFGLAKQTEKKESFISMLDTRGTAGYI 376
H +++I H D+KP NI L + P KI DFGLA + + F ++ GT ++
Sbjct: 130 H---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFV 183
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
APE+ ++ + ++D++S G++ + ++ G
Sbjct: 184 APEIV--NYEPLGLEADMWSIGVITYILLSG 212
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 26/211 (12%)
Query: 209 DKLGQGGYADVYK-GTLPDGRLVAVKVMKNLKDNG-------EEFINEVASISRTSHVNI 260
++LG G +A V K G A K +K + E+ EV+ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ K LI E + G L ++ + ES + E+ I G+ YL
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK------QILNGVYYL 130
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP----KISDFGLAKQTEKKESFISMLDTRGTAGYI 376
H +++I H D+KP NI L + P KI DFGLA + + F ++ GT ++
Sbjct: 131 H---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFV 184
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
APE+ ++ + ++D++S G++ + ++ G
Sbjct: 185 APEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 26/211 (12%)
Query: 209 DKLGQGGYADVYK-GTLPDGRLVAVKVMKNLKDNG-------EEFINEVASISRTSHVNI 260
++LG G +A V K G A K +K + E+ EV+ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ K LI E + G L ++ + ES + E+ I G+ YL
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK------QILNGVYYL 130
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP----KISDFGLAKQTEKKESFISMLDTRGTAGYI 376
H +++I H D+KP NI L + P KI DFGLA + + F ++ GT ++
Sbjct: 131 H---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFV 184
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
APE+ ++ + ++D++S G++ + ++ G
Sbjct: 185 APEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 43/277 (15%)
Query: 209 DKLGQGGYADVYKGTLPDGR---LVAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPF 263
+K+G+G + +V+KG D R +VA+K+ ++ +D E+ E+ +S+ + +
Sbjct: 13 EKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKY 70
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRG 323
G + K +I E++ GS + L+ + I I +GL+YLH
Sbjct: 71 YGSYLKDTKLWIIMEYLGGGSALDLLEPG-------PLDETQIATILREILKGLDYLH-- 121
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTE----KKESFISMLDTRGTAGYIAPE 379
+ + +H DIK N+ L E K++DFG+A Q K+ +F+ GT ++APE
Sbjct: 122 -SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV------GTPFWMAPE 174
Query: 380 VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLD 439
V + K+D++S G+ E+ G SE P + I L+
Sbjct: 175 VIKQ--SAYDSKADIWSLGITAIELARGE-------PPHSELHPMKVLFLIPKNNPPTLE 225
Query: 440 GVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
G ++ KE + C+ P RP+ ++++
Sbjct: 226 GNYSKPLKEFVEA-------CLNKEPSFRPTAKELLK 255
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 207 FSDKLGQGGYADVYKGT-LPDGRLVAVKVM--KNLKDNGEEFINEVASISRTSHVNIVPF 263
+ +G GG+A V + G +VA+K+M L + E+ ++ H +I
Sbjct: 14 LHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQL 73
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRG 323
K ++ E+ P G L YI + + + T R V++ I + Y+H
Sbjct: 74 YHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEET---RVVFR---QIVSAVAYVHSQ 127
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCR 383
H D+KP N+ DE K+ DFGL + + + + + G+ Y APE+ +
Sbjct: 128 ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDY-HLQTCCGSLAYAAPELI-Q 182
Query: 384 HFGGVSHKSDVYSYGMMIHEMVIG 407
+ ++DV+S G++++ ++ G
Sbjct: 183 GKSYLGSEADVWSMGILLYVLMCG 206
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 82/170 (48%), Gaps = 17/170 (10%)
Query: 243 EEFINEVASISRTS-HVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTL 301
E + EV + + S H NI+ L+++ M G L Y+ + K TL
Sbjct: 55 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE------KVTL 108
Query: 302 EWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKE 361
+ +I + + LH+ + IVH D+KP NI LD+D K++DFG + Q + E
Sbjct: 109 SEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE 165
Query: 362 SFISMLDTRGTAGYIAPEVF-CR---HFGGVSHKSDVYSYGMMIHEMVIG 407
+ + GT Y+APE+ C + G + D++S G++++ ++ G
Sbjct: 166 ---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 112/260 (43%), Gaps = 35/260 (13%)
Query: 209 DKLGQGGYAD----VYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFL 264
+ +G G Y++ V+K T AVKV+ K + E I + + H NI+
Sbjct: 33 ETIGVGSYSECKRCVHKAT---NMEYAVKVIDKSKRDPSEEIEILLRYGQ--HPNIITLK 87
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ K L+ E M G L I ++ R + I + +EYLH
Sbjct: 88 DVYDDGKHVYLVTELMRGGELLDKILR------QKFFSEREASFVLHTIGKTVEYLH--- 138
Query: 325 NIRIVHLDIKPHNIR-LDEDF---CPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
+ +VH D+KP NI +DE C +I DFG AKQ + ++ TA ++APEV
Sbjct: 139 SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL--LMTPCYTANFVAPEV 196
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDG 440
R G D++S G++++ M+ G + P I +I + F L G
Sbjct: 197 LKRQ--GYDEGCDIWSLGILLYTMLAGY----TPFANGPSDTPEEILTRIGSG-KFTLSG 249
Query: 441 ----VVTEEEKEMAKKMILV 456
V+E K++ KM+ V
Sbjct: 250 GNWNTVSETAKDLVSKMLHV 269
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 26/211 (12%)
Query: 209 DKLGQGGYADVYK-GTLPDGRLVAVKVMKNLKDNG-------EEFINEVASISRTSHVNI 260
++LG G +A V K G A K +K + E+ EV+ + H N+
Sbjct: 17 EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ K LI E + G L ++ + ES + E+ I G+ YL
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK------QILNGVYYL 130
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP----KISDFGLAKQTEKKESFISMLDTRGTAGYI 376
H +++I H D+KP NI L + P KI DFGLA + + F ++ GT ++
Sbjct: 131 H---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFV 184
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
APE+ ++ + ++D++S G++ + ++ G
Sbjct: 185 APEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 125/299 (41%), Gaps = 42/299 (14%)
Query: 209 DKLGQGGYADVYK-GTLPDGRLVAVKVMKNLKDNG-------EEFINEVASISRTSHVNI 260
++LG G +A V K G A K +K + EE EV+ + + H NI
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ + LI E + G L ++ ES + + + + QI G+ YL
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF--IKQILDGV----NYL 131
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP----KISDFGLAKQTEKKESFISMLDTRGTAGYI 376
H +I H D+KP NI L + P K+ DFGLA + E F ++ GT ++
Sbjct: 132 HTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF---GTPEFV 185
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIG--------RKNADVKVSCSSEYFPNAIYK 428
APE+ ++ + ++D++S G++ + ++ G ++ ++ S F +
Sbjct: 186 APEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFS 243
Query: 429 QI-ETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLEGSIENLQ 486
Q E DF +V E K + + L HP P T+ + S+ NL+
Sbjct: 244 QTSELAKDFIRKLLVKETRKRLTIQEAL-------RHPWITPVDTQQAMVRRESVVNLE 295
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 113/260 (43%), Gaps = 35/260 (13%)
Query: 209 DKLGQGGYAD----VYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFL 264
+ +G G Y++ V+K T + AVKV+ K + E I + + H NI+
Sbjct: 33 ETIGVGSYSECKRCVHKATNME---YAVKVIDKSKRDPSEEIEILLRYGQ--HPNIITLK 87
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ K L+ E M G L I ++ R + I + +EYLH
Sbjct: 88 DVYDDGKHVYLVTELMRGGELLDKILR------QKFFSEREASFVLHTIGKTVEYLH--- 138
Query: 325 NIRIVHLDIKPHNIR-LDEDF---CPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
+ +VH D+KP NI +DE C +I DFG AKQ + ++ TA ++APEV
Sbjct: 139 SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL--LMTPCYTANFVAPEV 196
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDG 440
R G D++S G++++ M+ G + P I +I + F L G
Sbjct: 197 LKRQ--GYDEGCDIWSLGILLYTMLAGY----TPFANGPSDTPEEILTRIGSG-KFTLSG 249
Query: 441 ----VVTEEEKEMAKKMILV 456
V+E K++ KM+ V
Sbjct: 250 GNWNTVSETAKDLVSKMLHV 269
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 209 DKLGQGGYADVYKGTLPDGRLVAVKVMKNLK-DNG--EEFINEVASISRTSHVNIVPFLG 265
+K+G+G Y VYK G A+K ++ K D G I E++ + H NIV
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ KK+ L++E + + L + + E LE T + + G+ Y H +
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLLDVCEGG-----LESVTAKSFLLQLLNGIAYCH---D 118
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ----TEKKESFISMLDTRGTAGYIAPEVF 381
R++H D+KP N+ ++ + KI+DFGLA+ K I T Y AP+V
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV------TLWYRAPDVL 172
Query: 382 CRHFGGVSHKS--DVYSYGMMIHEMVIG 407
G + + D++S G + EMV G
Sbjct: 173 ---MGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 210 KLGQGGYADVYKGTLPDGRL---VAVKVMKN--LKDNGEEFINEVASISRTSHVNIVPFL 264
+LG G + V +G + VA+KV+K K + EE + E + + + IV +
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRT-LEWRTVYQIAVGIARGLEYLHRG 323
G C + + L+ E G L +++ GKR + V ++ ++ G++YL
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFLV------GKREEIPVSNVAELLHQVSMGMKYLEEK 455
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT-RGTAGYIAPEVFC 382
VH ++ N+ L KISDFGL+K +S+ + + + APE C
Sbjct: 456 ---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE--C 510
Query: 383 RHFGGVSHKSDVYSYGMMIHEMV 405
+F S +SDV+SYG+ + E +
Sbjct: 511 INFRKFSSRSDVWSYGVTMWEAL 533
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 26/211 (12%)
Query: 209 DKLGQGGYADVYK-GTLPDGRLVAVKVMKNLKDNG-------EEFINEVASISRTSHVNI 260
++LG G +A V K G A K +K + E+ EV+ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ K LI E + G L ++ + ES + E+ I G+ YL
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK------QILNGVYYL 130
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP----KISDFGLAKQTEKKESFISMLDTRGTAGYI 376
H +++I H D+KP NI L + P KI DFGLA + + F ++ GT ++
Sbjct: 131 H---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFV 184
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
APE+ ++ + ++D++S G++ + ++ G
Sbjct: 185 APEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 33/213 (15%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLAFCHSH- 122
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------TLWYRAP 172
Query: 379 EVFCRHFGGVSHKS---DVYSYGMMIHEMVIGR 408
E+ G + S D++S G + EMV R
Sbjct: 173 EILL----GXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 131 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----- 178
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 179 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 82/170 (48%), Gaps = 17/170 (10%)
Query: 243 EEFINEVASISRTS-HVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTL 301
E + EV + + S H NI+ L+++ M G L Y+ + K TL
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE------KVTL 121
Query: 302 EWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKE 361
+ +I + + LH+ + IVH D+KP NI LD+D K++DFG + Q + E
Sbjct: 122 SEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE 178
Query: 362 SFISMLDTRGTAGYIAPEVF-CR---HFGGVSHKSDVYSYGMMIHEMVIG 407
+ + GT Y+APE+ C + G + D++S G++++ ++ G
Sbjct: 179 ---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 131 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 178
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 179 MTGXVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 136 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----- 183
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 184 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 136 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----- 183
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 184 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 123/277 (44%), Gaps = 43/277 (15%)
Query: 209 DKLGQGGYADVYKGTLPDGR---LVAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPF 263
+K+G+G + +V+KG D R +VA+K+ ++ +D E+ E+ +S+ + +
Sbjct: 28 EKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKY 85
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRG 323
G + K +I E++ GS + L+ + I I +GL+YLH
Sbjct: 86 YGSYLKDTKLWIIMEYLGGGSALDLLEPG-------PLDETQIATILREILKGLDYLH-- 136
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTE----KKESFISMLDTRGTAGYIAPE 379
+ + +H DIK N+ L E K++DFG+A Q K+ F+ GT ++APE
Sbjct: 137 -SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV------GTPFWMAPE 189
Query: 380 VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLD 439
V + K+D++S G+ E+ G SE P + I L+
Sbjct: 190 VIKQ--SAYDSKADIWSLGITAIELARGE-------PPHSELHPMKVLFLIPKNNPPTLE 240
Query: 440 GVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
G ++ KE + C+ P RP+ ++++
Sbjct: 241 GNYSKPLKEFVEA-------CLNKEPSFRPTAKELLK 270
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 33/213 (15%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++EF+ + L +++ D + G + + + +GL + H
Sbjct: 76 DVIHTENKLYLVFEFL-HQDLKKFM-DASALTG---IPLPLIKSYLFQLLQGLAFCH--- 127
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
+ R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 128 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------TLWYRAP 179
Query: 379 EVFCRHFGGVSHKS---DVYSYGMMIHEMVIGR 408
E+ G + S D++S G + EMV R
Sbjct: 180 EILL----GXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 142 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----- 189
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 190 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 25/207 (12%)
Query: 209 DKLGQGGYADVYKGTLPDGRLVAVKVMKNLK-DNG--EEFINEVASISRTSHVNIVPFLG 265
+K+G+G Y VYK G A+K ++ K D G I E++ + H NIV
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ KK+ L++E + + L + + E LE T + + G+ Y H +
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLLDVCEGG-----LESVTAKSFLLQLLNGIAYCH---D 118
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ---TEKKESFISMLDTRGTAGYIAPEVFC 382
R++H D+KP N+ ++ + KI+DFGLA+ +K + + T Y AP+V
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-----TLWYRAPDVL- 172
Query: 383 RHFGGVSHKS--DVYSYGMMIHEMVIG 407
G + + D++S G + EMV G
Sbjct: 173 --MGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 9/96 (9%)
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT 372
I RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ + M T
Sbjct: 157 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXGYVAT 208
Query: 373 AGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 209 RWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 27/175 (15%)
Query: 243 EEFINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE 302
E+ E+A + + H N+V + E + + + D E N +E
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLV-------------EVLDDPNEDHLYMVFELVNQGPVME 127
Query: 303 WRTVYQIAVGIAR--------GLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLA 354
T+ ++ AR G+EYLH +I+H DIKP N+ + ED KI+DFG++
Sbjct: 128 VPTLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVS 184
Query: 355 KQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKS-DVYSYGMMIHEMVIGR 408
+ + ++ +S +T GT ++APE S K+ DV++ G+ ++ V G+
Sbjct: 185 NEFKGSDALLS--NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 123/277 (44%), Gaps = 43/277 (15%)
Query: 209 DKLGQGGYADVYKGTLPDGR---LVAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPF 263
+K+G+G + +V+KG D R +VA+K+ ++ +D E+ E+ +S+ + +
Sbjct: 13 EKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKY 70
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRG 323
G + K +I E++ GS + L+ + I I +GL+YLH
Sbjct: 71 YGSYLKDTKLWIIMEYLGGGSALDLLEPG-------PLDETQIATILREILKGLDYLH-- 121
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTE----KKESFISMLDTRGTAGYIAPE 379
+ + +H DIK N+ L E K++DFG+A Q K+ F+ GT ++APE
Sbjct: 122 -SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV------GTPFWMAPE 174
Query: 380 VFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLD 439
V + K+D++S G+ E+ G SE P + I L+
Sbjct: 175 VIKQ--SAYDSKADIWSLGITAIELARGE-------PPHSELHPMKVLFLIPKNNPPTLE 225
Query: 440 GVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
G ++ KE + C+ P RP+ ++++
Sbjct: 226 GNYSKPLKEFVEA-------CLNKEPSFRPTAKELLK 255
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 25/207 (12%)
Query: 209 DKLGQGGYADVYKGTLPDGRLVAVKVMKNLK-DNG--EEFINEVASISRTSHVNIVPFLG 265
+K+G+G Y VYK G A+K ++ K D G I E++ + H NIV
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ KK+ L++E + + L + + E LE T + + G+ Y H +
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLLDVCEGG-----LESVTAKSFLLQLLNGIAYCH---D 118
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ---TEKKESFISMLDTRGTAGYIAPEVFC 382
R++H D+KP N+ ++ + KI+DFGLA+ +K + + T Y AP+V
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-----TLWYRAPDVL- 172
Query: 383 RHFGGVSHKS--DVYSYGMMIHEMVIG 407
G + + D++S G + EMV G
Sbjct: 173 --MGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 26/211 (12%)
Query: 209 DKLGQGGYADVYK-GTLPDGRLVAVKVMKNLKDNG-------EEFINEVASISRTSHVNI 260
++LG G +A V K G A K +K + E+ EV+ + H N+
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ K LI E + G L ++ + ES + E+ I G+ YL
Sbjct: 77 ITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLK------QILNGVYYL 130
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP----KISDFGLAKQTEKKESFISMLDTRGTAGYI 376
H +++I H D+KP NI L + P KI DFGLA + + F ++ GT ++
Sbjct: 131 H---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFV 184
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
APE+ ++ + ++D++S G++ + ++ G
Sbjct: 185 APEIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 151 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 198
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 199 MXGXVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 31/212 (14%)
Query: 209 DKLGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNG--EEFINEVASISRTSHVNIVPFL 264
+K+G+G Y VYK G +VA+K ++ + + G I E++ + +H NIV L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
+ + K L++E + + L ++ D + G + + + +GL + H
Sbjct: 68 DVIHTENKLYLVFEHV-HQDLKTFM-DASALTG---IPLPLIKSYLFQLLQGLAFCHSH- 121
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAP 378
R++H D+KP N+ ++ + K++DFGLA+ +T E T Y AP
Sbjct: 122 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------TLWYRAP 171
Query: 379 EVF--CRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ C+++ S D++S G + EMV R
Sbjct: 172 EILLGCKYY---STAVDIWSLGCIFAEMVTRR 200
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 131 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 178
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 179 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 133 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE----- 180
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 181 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 137 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE----- 184
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 185 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 131 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 178
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 179 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 131 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 178
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 179 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 138 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 185
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 186 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 136 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 183
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 184 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 131 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 178
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 179 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 131 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 178
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 179 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 130 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 177
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 178 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 133 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 180
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 181 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 131 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 178
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 179 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 131 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 178
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 179 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 143 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 190
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 191 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 133 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 180
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 181 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 131 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 178
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 179 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 131 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 178
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 179 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 127 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 174
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 175 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 143 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 190
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 191 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 143 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 190
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 191 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 133 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 180
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 181 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 128 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 175
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 176 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 136 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 183
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 184 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 123/282 (43%), Gaps = 51/282 (18%)
Query: 210 KLGQG--GYADVYKGTLPDGRLVAVK---VMKNLKDNGEEFINEVASISRTSHVNIVPFL 264
K+G+G G A + K T DGR +K + + EE EVA ++ H NIV +
Sbjct: 31 KIGEGSFGKAILVKST-EDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESS--NGKRTLEWRTVYQIAVGIARGLEYLHR 322
E ++ ++ G L + I + + L+W V I L+++H
Sbjct: 90 ESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW------FVQICLALKHVH- 142
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+ +I+H DIK NI L +D ++ DFG+A+ GT Y++PE+ C
Sbjct: 143 --DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA--CIGTPYYLSPEI-C 197
Query: 383 RHFGGVSHKSDVYSYGMMIHEMVIGR--------KNADVKVSCSSEYFPNAIYKQIETEY 434
+ ++KSD+++ G +++E+ + KN +K+ S FP + Y
Sbjct: 198 EN-KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS--FP-----PVSLHY 249
Query: 435 DFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE 476
+ L +V++ + +P DRPS+ ++E
Sbjct: 250 SYDLRSLVSQ---------------LFKRNPRDRPSVNSILE 276
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 141 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 188
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 189 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 129 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 176
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 177 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 131 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 178
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 179 MAGFVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 137 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 184
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 185 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 128 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 175
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 176 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 142 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 189
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 190 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 131 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 178
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 179 MAGFVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 150 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 197
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 198 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 115/273 (42%), Gaps = 35/273 (12%)
Query: 209 DKLGQGGYADVYK-GTLPDGRLVAVKVMKNLKDNG-------EEFINEVASISRTSHVNI 260
++LG G +A V K G A K +K + EE EV+ + + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ + LI E + G L ++ ES + + + + QI G+ YL
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF--IKQILDGV----NYL 131
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP----KISDFGLAKQTEKKESFISMLDTRGTAGYI 376
H +I H D+KP NI L + P K+ DFGLA + E F ++ GT ++
Sbjct: 132 HTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF---GTPEFV 185
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIG--------RKNADVKVSCSSEYFPNAIYK 428
APE+ ++ + ++D++S G++ + ++ G ++ ++ S F +
Sbjct: 186 APEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFS 243
Query: 429 QI-ETEYDFQLDGVVTEEEKEMAKKMILVSLWC 460
Q E DF +V E K + + L W
Sbjct: 244 QTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 127 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 174
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 175 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 154 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 201
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 202 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 127 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 174
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 175 MAGFVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 151 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 198
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 199 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 127 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 174
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 175 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 150 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 197
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 198 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 115/273 (42%), Gaps = 35/273 (12%)
Query: 209 DKLGQGGYADVYK-GTLPDGRLVAVKVMKNLKDNG-------EEFINEVASISRTSHVNI 260
++LG G +A V K G A K +K + EE EV+ + + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ + LI E + G L ++ ES + + + + QI G+ YL
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF--IKQILDGV----NYL 131
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP----KISDFGLAKQTEKKESFISMLDTRGTAGYI 376
H +I H D+KP NI L + P K+ DFGLA + E F ++ GT ++
Sbjct: 132 HTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF---GTPEFV 185
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIG--------RKNADVKVSCSSEYFPNAIYK 428
APE+ ++ + ++D++S G++ + ++ G ++ ++ S F +
Sbjct: 186 APEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFS 243
Query: 429 QI-ETEYDFQLDGVVTEEEKEMAKKMILVSLWC 460
Q E DF +V E K + + L W
Sbjct: 244 QTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 151 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 198
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 199 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 22/207 (10%)
Query: 207 FSDKLGQG--GYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFL 264
F +G G G A + + L LVAVK ++ E E+ + H NIV F
Sbjct: 24 FVKDIGSGNFGVARLMRDKL-TKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFK 82
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTL-EWRTVYQIAVGIARGLEYLHRG 323
A+I E+ G L Y+ + G+ + E R +Q + G+ Y H
Sbjct: 83 EVILTPTHLAIIMEYASGGEL----YERICNAGRFSEDEARFFFQ---QLLSGVSYCH-- 133
Query: 324 CNIRIVHLDIKPHNIRLDEDFCP--KISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF 381
+++I H D+K N LD P KI DFG +K + S T GT YIAPEV
Sbjct: 134 -SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS---TVGTPAYIAPEVL 189
Query: 382 CRH-FGGVSHKSDVYSYGMMIHEMVIG 407
R + G +DV+S G+ ++ M++G
Sbjct: 190 LRQEYDG--KIADVWSCGVTLYVMLVG 214
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 137 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 184
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 185 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E+MP G + + H G+ + Y A I EYLH ++ +++ D+K
Sbjct: 118 MVMEYMPGGDM----FSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 168
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ K++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 169 PENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 221
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 222 WALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E+MP G + + H G+ + Y A I EYLH ++ +++ D+K
Sbjct: 118 MVMEYMPGGDM----FSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 168
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ K++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 169 PENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 221
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 222 WALGVLIYEMAAG 234
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 26/208 (12%)
Query: 211 LGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISR-TSHVNIVPFLGFCY- 268
+G G + V++ L + VA+K K L+D + F N I R H N+V F Y
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIK--KVLQD--KRFKNRELQIMRIVKHPNVVDLKAFFYS 103
Query: 269 --EKKKRA---LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRG 323
+KK L+ E++P Y + K+T+ + + R L Y+H
Sbjct: 104 NGDKKDEVFLNLVLEYVPETV---YRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH-- 158
Query: 324 CNIRIVHLDIKPHNIRLDEDF-CPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
+I I H DIKP N+ LD K+ DFG AK E +S + +R Y APE+
Sbjct: 159 -SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSR---YYRAPELI- 213
Query: 383 RHFGGVSHKS--DVYSYGMMIHEMVIGR 408
FG ++ + D++S G ++ E++ G+
Sbjct: 214 --FGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 160 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 207
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 208 MTGYVATRWYRAPEIML-NWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 137 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 184
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 185 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T +
Sbjct: 138 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE----- 185
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 186 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T +
Sbjct: 138 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE----- 185
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 186 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T +
Sbjct: 138 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE----- 185
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 186 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 17/105 (16%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGLA+ T+ +
Sbjct: 131 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----- 178
Query: 366 MLDTRGTAGYIAPEVFCR--HFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ H+ + D++S G ++ E++ GR
Sbjct: 179 MTGYVATRWYRAPEIMLNAMHY---NQTVDIWSVGCIMAELLTGR 220
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 23/203 (11%)
Query: 211 LGQGGYADVYK-GTLPDGRLVAVKVMKN-----LKDNGEEFINEVASISRTSHVNIVPFL 264
LG G + V+ + +GR A+KV+K LK E +E +S +H I+
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLK-QVEHTNDERLMLSIVTHPFIIRMW 72
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
G + ++ +I +++ G L + + Y V +A LEYLH
Sbjct: 73 GTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVA----KFYAAEVCLA--LEYLHSK- 125
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRH 384
I++ D+KP NI LD++ KI+DFG AK + GT YIAPEV
Sbjct: 126 --DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLC-----GTPDYIAPEVVSTK 178
Query: 385 FGGVSHKSDVYSYGMMIHEMVIG 407
+ D +S+G++I+EM+ G
Sbjct: 179 --PYNKSIDWWSFGILIYEMLAG 199
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 26/211 (12%)
Query: 209 DKLGQGGYADVYK-GTLPDGRLVAVKVMKNLKDNG-------EEFINEVASISRTSHVNI 260
++LG G +A V K G A K +K + EE EV+ + + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ + LI E + G L ++ ES + + + + QI G+ YL
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF--IKQILDGV----NYL 131
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP----KISDFGLAKQTEKKESFISMLDTRGTAGYI 376
H +I H D+KP NI L + P K+ DFGLA + E F ++ GT ++
Sbjct: 132 HTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF---GTPEFV 185
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
APE+ ++ + ++D++S G++ + ++ G
Sbjct: 186 APEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 26/211 (12%)
Query: 209 DKLGQGGYADVYK-GTLPDGRLVAVKVMKNLKDNG-------EEFINEVASISRTSHVNI 260
++LG G +A V K G A K +K + EE EV+ + + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ + LI E + G L ++ ES + + + + QI G+ YL
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF--IKQILDGV----NYL 131
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP----KISDFGLAKQTEKKESFISMLDTRGTAGYI 376
H +I H D+KP NI L + P K+ DFGLA + E F ++ GT ++
Sbjct: 132 HTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF---GTPEFV 185
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
APE+ ++ + ++D++S G++ + ++ G
Sbjct: 186 APEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 127/306 (41%), Gaps = 43/306 (14%)
Query: 211 LGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNGE---EFINEVASISRTSHVNIVPFLG 265
LG GG ++V+ L D R VAVKV++ +L + F E + + +H IV
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 266 FCYEKKKRA----LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
+ ++ E++ +L ++ KR +E + + L + H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE------VIADACQALNFSH 133
Query: 322 RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ-TEKKESFISMLDTRGTAGYIAPEV 380
+ I+H D+KP NI + K+ DFG+A+ + S GTA Y++PE
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE- 189
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIGRK--NADVKVSCSSEYF------PNAIYKQIET 432
V +SDVYS G +++E++ G D VS + ++ P+A ++ +
Sbjct: 190 -QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSA 248
Query: 433 EYDFQLDGVV-------TEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE---MLEGSI 482
+ LD VV E + A +M + PP+ P + E +L +
Sbjct: 249 D----LDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAERTSLLSSAA 304
Query: 483 ENLQIP 488
NL P
Sbjct: 305 GNLSGP 310
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 23/209 (11%)
Query: 211 LGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCYEK 270
+G+G Y +V++G L G VAVK+ + + E+ + H NI+ F+
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTS 74
Query: 271 KKRA----LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC-- 324
+ + LI + +GSL ++ ++TLE ++AV A GL +LH
Sbjct: 75 RNSSTQLWLITHYHEHGSLYDFLQ-------RQTLEPHLALRLAVSAACGLAHLHVEIFG 127
Query: 325 ---NIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR--GTAGYIAPE 379
I H D K N+ + + I+D GLA + ++ + + GT Y+APE
Sbjct: 128 TQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPE 187
Query: 380 VFCRHFGGVSHKS----DVYSYGMMIHEM 404
V +S D++++G+++ E+
Sbjct: 188 VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 29/203 (14%)
Query: 219 VYKGTLPDGRLVAVKVMKNLKDN-GEEFINEVASISR---------TSHVNIVPFLGFCY 268
V++ T G AVK+M+ + E + EV +R H +I+ +
Sbjct: 114 VHRAT---GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170
Query: 269 EKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRI 328
L+++ M G L Y+ + K L + I + + +LH I
Sbjct: 171 SSSFMFLVFDLMRKGELFDYLTE------KVALSEKETRSIMRSLLEAVSFLHAN---NI 221
Query: 329 VHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF-C---RH 384
VH D+KP NI LD++ ++SDFG + E E + GT GY+APE+ C
Sbjct: 222 VHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELC---GTPGYLAPEILKCSMDET 278
Query: 385 FGGVSHKSDVYSYGMMIHEMVIG 407
G + D+++ G+++ ++ G
Sbjct: 279 HPGYGKEVDLWACGVILFTLLAG 301
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 211 LGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFINEVAS----ISRTSHVNIVPFLG 265
+G+G YA V L R+ A+KV+K N +E I+ V + + S+ + L
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 266 FCYEKKKRAL-IYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH-RG 323
C++ + R + E++ G L H K E Y + +A L YLH RG
Sbjct: 88 SCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLA--LNYLHERG 141
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCR 383
I++ D+K N+ LD + K++D+G+ K+ + S GT YIAPE+
Sbjct: 142 ----IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF--CGTPNYIAPEILRG 195
Query: 384 HFGGVSHKSDVYSYGMMIHEMVIGRKNADV 413
G S D ++ G+++ EM+ GR D+
Sbjct: 196 EDYGFS--VDWWALGVLMFEMMAGRSPFDI 223
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI D+GLA+ T+ +
Sbjct: 131 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE----- 178
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 179 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 107/222 (48%), Gaps = 44/222 (19%)
Query: 209 DKLGQGGYADVYKGTLPDGR---LVAVKV--MKNLKDNGEEFINEVASISRTSHVNIVPF 263
+++G+G + +V+KG D R +VA+K+ ++ +D E+ E+ +S+ + +
Sbjct: 29 ERIGKGSFGEVFKGI--DNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKY 86
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYI----YDHESSNGKRTLEWRTVYQIAV---GIARG 316
G + K +I E++ GS + +D +QIA I +G
Sbjct: 87 YGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDE--------------FQIATMLKEILKG 132
Query: 317 LEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTE----KKESFISMLDTRGT 372
L+YLH + + +H DIK N+ L E K++DFG+A Q K+ +F+ GT
Sbjct: 133 LDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV------GT 183
Query: 373 AGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR-KNADV 413
++APEV + K+D++S G+ E+ G N+D+
Sbjct: 184 PFWMAPEVIQQ--SAYDSKADIWSLGITAIELAKGEPPNSDM 223
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E+ P G + + H G+ + Y A I EYLH ++ +++ D+K
Sbjct: 118 MVMEYAPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 168
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ K++DFGLAK+ + + + GT Y+APE+ G + D
Sbjct: 169 PENLMIDQQGYIKVTDFGLAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 221
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 222 WALGVLIYEMAAG 234
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 211 LGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFINEVAS----ISRTSHVNIVPFLG 265
+G+G YA V L R+ A+KV+K N +E I+ V + + S+ + L
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 266 FCYEKKKRAL-IYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH-RG 323
C++ + R + E++ G L H K E Y + +A L YLH RG
Sbjct: 73 SCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLA--LNYLHERG 126
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCR 383
I++ D+K N+ LD + K++D+G+ K+ + S GT YIAPE+
Sbjct: 127 ----IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF--CGTPNYIAPEILRG 180
Query: 384 HFGGVSHKSDVYSYGMMIHEMVIGRKNADV 413
G S D ++ G+++ EM+ GR D+
Sbjct: 181 EDYGFS--VDWWALGVLMFEMMAGRSPFDI 208
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 11/201 (5%)
Query: 238 LKDNGEEFINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSL---DQYIYDHES 294
+K ++F NE+ I+ + + G + +IYE+M N S+ D+Y + +
Sbjct: 83 IKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK 142
Query: 295 SNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLA 354
N + + + I + Y+H NI H D+KP NI +D++ K+SDFG +
Sbjct: 143 -NYTCFIPIQVIKCIIKSVLNSFSYIHNEKNI--CHRDVKPSNILMDKNGRVKLSDFGES 199
Query: 355 KQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVK 414
+ K+ + +RGT ++ PE F K D++S G+ ++ M +K
Sbjct: 200 EYMVDKK----IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLK 255
Query: 415 VSCSSEYFPNAIYKQIETEYD 435
+S E F N K IE D
Sbjct: 256 ISL-VELFNNIRTKNIEYPLD 275
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 26/211 (12%)
Query: 209 DKLGQGGYADVYK-GTLPDGRLVAVKVMKNLKDNG-------EEFINEVASISRTSHVNI 260
++LG G +A V K G A K +K + EE EV+ + + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ + LI E + G L ++ ES + + + + QI G+ YL
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF--IKQILDGV----NYL 131
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP----KISDFGLAKQTEKKESFISMLDTRGTAGYI 376
H +I H D+KP NI L + P K+ DFGLA + E F ++ GT ++
Sbjct: 132 HTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF---GTPEFV 185
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
APE+ ++ + ++D++S G++ + ++ G
Sbjct: 186 APEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 127/306 (41%), Gaps = 43/306 (14%)
Query: 211 LGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNGE---EFINEVASISRTSHVNIVPFLG 265
LG GG ++V+ L D R VAVKV++ +L + F E + + +H IV
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 266 FCYEKKKRA----LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
+ ++ E++ +L ++ KR +E + + L + H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE------VIADACQALNFSH 133
Query: 322 RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ-TEKKESFISMLDTRGTAGYIAPEV 380
+ I+H D+KP NI + K+ DFG+A+ + S GTA Y++PE
Sbjct: 134 QNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE- 189
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIGRK--NADVKVSCSSEYF------PNAIYKQIET 432
V +SDVYS G +++E++ G D VS + ++ P+A ++ +
Sbjct: 190 -QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSA 248
Query: 433 EYDFQLDGVV-------TEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE---MLEGSI 482
+ LD VV E + A +M + PP+ P + E +L +
Sbjct: 249 D----LDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAERTSLLSSAA 304
Query: 483 ENLQIP 488
NL P
Sbjct: 305 GNLSGP 310
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 14/205 (6%)
Query: 210 KLGQGGYADVYKGT-LPDGRLVAVKVMKNLKDNGEE--FINEVASISRTSHVNI-VPFLG 265
+LG+G Y V K +P G++ AVK ++ ++ E+ + ++ RT V F G
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYG 100
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ + + E + + SLD++ Y G +T+ + +IAV I + LE+LH
Sbjct: 101 ALFREGDVWICXE-LXDTSLDKF-YKQVIDKG-QTIPEDILGKIAVSIVKALEHLH--SK 155
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
+ ++H D+KP N+ ++ K DFG++ + +D G Y APE
Sbjct: 156 LSVIHRDVKPSNVLINALGQVKXCDFGISGYL--VDDVAKDIDA-GCKPYXAPERINPEL 212
Query: 386 G--GVSHKSDVYSYGMMIHEMVIGR 408
G S KSD++S G+ E+ I R
Sbjct: 213 NQKGYSVKSDIWSLGITXIELAILR 237
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 211 LGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFINEVAS----ISRTSHVNIVPFLG 265
+G+G YA V L R+ A+KV+K N +E I+ V + + S+ + L
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 266 FCYEKKKRAL-IYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH-RG 323
C++ + R + E++ G L H K E Y + +A L YLH RG
Sbjct: 77 SCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLA--LNYLHERG 130
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCR 383
I++ D+K N+ LD + K++D+G+ K+ + S GT YIAPE+
Sbjct: 131 ----IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF--CGTPNYIAPEILRG 184
Query: 384 HFGGVSHKSDVYSYGMMIHEMVIGRKNADV 413
G S D ++ G+++ EM+ GR D+
Sbjct: 185 EDYGFS--VDWWALGVLMFEMMAGRSPFDI 212
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 211 LGQGGYADV----YKGTLPDGRLVAVKVMKN---LKDNGEEFINEVASISRTSHVNIVPF 263
+G+G + +V +K T ++ A+K++ +K + F E I ++ V
Sbjct: 77 IGRGAFGEVQLVRHKST---RKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 133
Query: 264 LGFCYEKKKRA-LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
L + ++ + ++ E+MP G L + SN +W Y V +A L+ +H
Sbjct: 134 LFYAFQDDRYLYMVMEYMPGGDLVNLM-----SNYDVPEKWARFYTAEVVLA--LDAIH- 185
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
++ +H D+KP N+ LD+ K++DFG + KE + GT YI+PEV
Sbjct: 186 --SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM-NKEGMVRCDTAVGTPDYISPEVLK 242
Query: 383 RHFGG--VSHKSDVYSYGMMIHEMVIG 407
G + D +S G+ ++EM++G
Sbjct: 243 SQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 211 LGQGGYADV----YKGTLPDGRLVAVKVMKN---LKDNGEEFINEVASISRTSHVNIVPF 263
+G+G + +V +K T ++ A+K++ +K + F E I ++ V
Sbjct: 82 IGRGAFGEVQLVRHKST---RKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 138
Query: 264 LGFCYEKKKRA-LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
L + ++ + ++ E+MP G L + SN +W Y V +A L+ +H
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDLVNLM-----SNYDVPEKWARFYTAEVVLA--LDAIH- 190
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
++ +H D+KP N+ LD+ K++DFG + KE + GT YI+PEV
Sbjct: 191 --SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM-NKEGMVRCDTAVGTPDYISPEVLK 247
Query: 383 RHFGG--VSHKSDVYSYGMMIHEMVIG 407
G + D +S G+ ++EM++G
Sbjct: 248 SQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 211 LGQGGYADV----YKGTLPDGRLVAVKVMKN---LKDNGEEFINEVASISRTSHVNIVPF 263
+G+G + +V +K T ++ A+K++ +K + F E I ++ V
Sbjct: 82 IGRGAFGEVQLVRHKST---RKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 138
Query: 264 LGFCYEKKKRA-LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
L + ++ + ++ E+MP G L + SN +W Y V +A L+ +H
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDLVNLM-----SNYDVPEKWARFYTAEVVLA--LDAIH- 190
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC 382
++ +H D+KP N+ LD+ K++DFG + KE + GT YI+PEV
Sbjct: 191 --SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM-NKEGMVRCDTAVGTPDYISPEVLK 247
Query: 383 RHFGG--VSHKSDVYSYGMMIHEMVIG 407
G + D +S G+ ++EM++G
Sbjct: 248 SQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 30/225 (13%)
Query: 211 LGQGGYADVY---KGTLPD-GRLVAVKVMKNLKDNGEEFINEVASISRT--SHVNIVPFL 264
LG G Y V+ K + D G+L A+KV+K + E R H+ PFL
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 121
Query: 265 GFCY----EKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVG-IARGLEY 319
+ + K LI +++ G L + H S + T QI VG I LE+
Sbjct: 122 VTLHYAFQTETKLHLILDYINGGEL----FTHLSQRERFT---EHEVQIYVGEIVLALEH 174
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH+ + I++ DIK NI LD + ++DFGL+K+ E+ + D GT Y+AP+
Sbjct: 175 LHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAY-DFCGTIEYMAPD 230
Query: 380 VFCRHFGGVSHKSDVYSYGMMIHEM--------VIGRKNADVKVS 416
+ G D +S G++++E+ V G KN+ ++S
Sbjct: 231 IVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS 275
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI DFGL + T+ +
Sbjct: 131 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE----- 178
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 179 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 211 LGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFINEVAS----ISRTSHVNIVPFLG 265
+G+G YA V L R+ A++V+K N +E I+ V + + S+ + L
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 119
Query: 266 FCYEKKKRAL-IYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH-RG 323
C++ + R + E++ G L H K E Y + +A L YLH RG
Sbjct: 120 SCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLA--LNYLHERG 173
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCR 383
I++ D+K N+ LD + K++D+G+ K+ + S GT YIAPE+
Sbjct: 174 ----IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTF--CGTPNYIAPEILRG 227
Query: 384 HFGGVSHKSDVYSYGMMIHEMVIGRKNADV 413
G S D ++ G+++ EM+ GR D+
Sbjct: 228 EDYGFS--VDWWALGVLMFEMMAGRSPFDI 255
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 19/181 (10%)
Query: 231 AVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIY 290
AVK++ K + E I + + H NI+ + K ++ E M G L I
Sbjct: 51 AVKIIDKSKRDPTEEIEIL--LRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL 108
Query: 291 DHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIR-LDEDFCP--- 346
++ R + I + +EYLH +VH D+KP NI +DE P
Sbjct: 109 R------QKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESI 159
Query: 347 KISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVI 406
+I DFG AKQ + ++ TA ++APEV R G D++S G++++ M+
Sbjct: 160 RICDFGFAKQLRAENGL--LMTPCYTANFVAPEVLERQ--GYDAACDIWSLGVLLYTMLT 215
Query: 407 G 407
G
Sbjct: 216 G 216
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 114/276 (41%), Gaps = 28/276 (10%)
Query: 209 DKLGQGGYADVYKGT-LPDGRLVAVK-VMKNLKDNGEEFINEVASISRTSHVNIVPFLGF 266
++LG G + V++ T G A K VM + + E E+ ++S H +V
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 222
Query: 267 CYEKKKRALIYEFMPNGSLDQYIYD-HESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ + +IYEFM G L + + D H + +E+ + +GL ++H
Sbjct: 223 FEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR------QVCKGLCHMHEN-- 274
Query: 326 IRIVHLDIKPHNIRLDEDFCP--KISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCR 383
VHLD+KP NI K+ DFGL + K+S T GTA + APEV
Sbjct: 275 -NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV---TTGTAEFAAPEV--A 328
Query: 384 HFGGVSHKSDVYSYGMMIHEMV-----IGRKNADVKV----SCSSEYFPNAIYKQIETEY 434
V + +D++S G++ + ++ G +N D + SC +A E
Sbjct: 329 EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGK 388
Query: 435 DFQLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPS 470
DF ++ + M L W + P R S
Sbjct: 389 DFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDS 424
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
VYQ+ RGL+Y+H I+H D+KP N+ ++ED +I DFGLA+Q +++
Sbjct: 137 VYQLL----RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEE----- 184
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ G+
Sbjct: 185 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
VYQ+ +GL Y+H I+H D+KP N+ ++ED KI DFGLA+Q + +
Sbjct: 134 VYQML----KGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSE----- 181
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APEV ++ + D++S G ++ EM+ G+
Sbjct: 182 MXGXVVTRWYRAPEVIL-NWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E++P G + + H G+ + Y A I EYLH ++ +++ D+K
Sbjct: 118 MVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 168
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ K++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 169 PENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 221
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 222 WALGVLIYEMAAG 234
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
VYQ+ RGL+Y+H I+H D+KP N+ ++ED +I DFGLA+Q +++
Sbjct: 137 VYQLL----RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEE----- 184
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ G+
Sbjct: 185 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
VYQ+ RGL+Y+H I+H D+KP N+ ++ED +I DFGLA+Q +++
Sbjct: 129 VYQLL----RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEE----- 176
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ G+
Sbjct: 177 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 105/236 (44%), Gaps = 33/236 (13%)
Query: 181 AAFVRNYGSLAPKRFSYSDVRRMTKSFSDKLGQGGYADVY----KGTLPDGRLVAVKVMK 236
A+ V +Y R + SD + +LG+G + VY KGT + A+KV+K
Sbjct: 35 ASLVPDYWIDGSNRDALSDFFEV----ESELGRGATSIVYRCKQKGT---QKPYALKVLK 87
Query: 237 NLKDNGEEFINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSN 296
D + E+ + R SH NI+ + +L+ E + G L I + +
Sbjct: 88 KTVDK-KIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYS 146
Query: 297 GKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDE---DFCPKISDFGL 353
+ + V QI +A YLH IVH D+KP N+ D KI+DFGL
Sbjct: 147 ERDAAD--AVKQILEAVA----YLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGL 197
Query: 354 AKQTEKKESFISMLDTRGTAGYIAPEVF--CRHFGGVSHKSDVYSYGMMIHEMVIG 407
+K E + + M GT GY APE+ C + + D++S G++ + ++ G
Sbjct: 198 SKIVEHQ---VLMKTVCGTPGYCAPEILRGCAY----GPEVDMWSVGIITYILLCG 246
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 19/204 (9%)
Query: 209 DKLGQGGYADVYKGT-LPDGRLVAVK-VMKNLKDNGEEFINEVASISRTSHVNIVPFLGF 266
++LG G + V++ T G A K VM + + E E+ ++S H +V
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 116
Query: 267 CYEKKKRALIYEFMPNGSLDQYIYD-HESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ + +IYEFM G L + + D H + +E+ + +GL ++H
Sbjct: 117 FEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR------QVCKGLCHMHEN-- 168
Query: 326 IRIVHLDIKPHNIRLDEDFCP--KISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCR 383
VHLD+KP NI K+ DFGL + K+S T GTA + APEV
Sbjct: 169 -NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV---TTGTAEFAAPEV--A 222
Query: 384 HFGGVSHKSDVYSYGMMIHEMVIG 407
V + +D++S G++ + ++ G
Sbjct: 223 EGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 23/186 (12%)
Query: 248 EVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVY 307
E++ + H +I+ ++ E+ G L YI + + E R +
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTED---EGRRFF 114
Query: 308 QIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML 367
Q I +EY HR +IVH D+KP N+ LD++ KI+DFGL+ +F+
Sbjct: 115 Q---QIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLS-NIMTDGNFLKT- 166
Query: 368 DTRGTAGYIAPEVF-CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAI 426
+ G+ Y APEV + + G + DV+S G++++ M++GR D E+ PN +
Sbjct: 167 -SCGSPNYAAPEVINGKLYAG--PEVDVWSCGIVLYVMLVGRLPFD------DEFIPN-L 216
Query: 427 YKQIET 432
+K++ +
Sbjct: 217 FKKVNS 222
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 25/206 (12%)
Query: 211 LGQGGYADV---YKGTLPDGRLVAVKVMKNL----KDNGEEFINEVASISRTSHVNIVPF 263
LG+G + V Y T G+ VA+K++ D E++ + H +I+
Sbjct: 12 LGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 69
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRG 323
K + ++ E+ N D YI + + + E R +Q I +EY HR
Sbjct: 70 YDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQ---EARRFFQ---QIISAVEYCHRH 122
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC- 382
+IVH D+KP N+ LDE KI+DFGL+ +F+ + G+ Y APEV
Sbjct: 123 ---KIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT--SCGSPNYAAPEVISG 176
Query: 383 RHFGGVSHKSDVYSYGMMIHEMVIGR 408
+ + G + DV+S G++++ M+ R
Sbjct: 177 KLYAG--PEVDVWSCGVILYVMLCRR 200
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 25/206 (12%)
Query: 211 LGQGGYADV---YKGTLPDGRLVAVKVMKNL----KDNGEEFINEVASISRTSHVNIVPF 263
LG+G + V Y T G+ VA+K++ D E++ + H +I+
Sbjct: 22 LGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 79
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRG 323
K + ++ E+ N D YI + + + E R +Q I +EY HR
Sbjct: 80 YDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQ---EARRFFQ---QIISAVEYCHRH 132
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC- 382
+IVH D+KP N+ LDE KI+DFGL+ +F+ + G+ Y APEV
Sbjct: 133 ---KIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT--SCGSPNYAAPEVISG 186
Query: 383 RHFGGVSHKSDVYSYGMMIHEMVIGR 408
+ + G + DV+S G++++ M+ R
Sbjct: 187 KLYAG--PEVDVWSCGVILYVMLCRR 210
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E+ P G + + H G+ + Y A I EYLH ++ +++ D+K
Sbjct: 118 MVMEYAPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 168
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ +++DFGLAK+ + + + GT Y+APE+ G + D
Sbjct: 169 PENLMIDQQGYIQVTDFGLAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 221
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 222 WALGVLIYEMAAG 234
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 25/206 (12%)
Query: 211 LGQGGYADV---YKGTLPDGRLVAVKVMKNL----KDNGEEFINEVASISRTSHVNIVPF 263
LG+G + V Y T G+ VA+K++ D E++ + H +I+
Sbjct: 16 LGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 73
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRG 323
K + ++ E+ N D YI + + + E R +Q I +EY HR
Sbjct: 74 YDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQ---EARRFFQ---QIISAVEYCHRH 126
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC- 382
+IVH D+KP N+ LDE KI+DFGL+ +F+ + G+ Y APEV
Sbjct: 127 ---KIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT--SCGSPNYAAPEVISG 180
Query: 383 RHFGGVSHKSDVYSYGMMIHEMVIGR 408
+ + G + DV+S G++++ M+ R
Sbjct: 181 KLYAG--PEVDVWSCGVILYVMLCRR 204
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E+ P G + + H G+ + Y A I EYLH ++ +++ D+K
Sbjct: 119 MVMEYAPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 169
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ K++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 170 PENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 222
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 223 WALGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E+ P G + + H G+ + Y A I EYLH ++ +++ D+K
Sbjct: 118 MVMEYAPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 168
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ K++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 169 PENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 221
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 222 WALGVLIYEMAAG 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E+ P G + + H G+ + Y A I EYLH ++ +++ D+K
Sbjct: 119 MVMEYAPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 169
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ K++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 170 PENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 222
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 223 WALGVLIYEMAAG 235
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 25/206 (12%)
Query: 211 LGQGGYADV---YKGTLPDGRLVAVKVMKNL----KDNGEEFINEVASISRTSHVNIVPF 263
LG+G + V Y T G+ VA+K++ D E++ + H +I+
Sbjct: 21 LGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 78
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRG 323
K + ++ E+ N D YI + + + E R +Q I +EY HR
Sbjct: 79 YDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQ---EARRFFQ---QIISAVEYCHRH 131
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFC- 382
+IVH D+KP N+ LDE KI+DFGL+ +F+ + G+ Y APEV
Sbjct: 132 ---KIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT--SCGSPNYAAPEVISG 185
Query: 383 RHFGGVSHKSDVYSYGMMIHEMVIGR 408
+ + G + DV+S G++++ M+ R
Sbjct: 186 KLYAG--PEVDVWSCGVILYVMLCRR 209
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E+ P G + + H G+ + Y A I EYLH ++ +++ D+K
Sbjct: 119 MVMEYAPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 169
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ K++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 170 PENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 222
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 223 WALGVLIYEMAAG 235
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 10/164 (6%)
Query: 245 FINEVASISRTSHVNIVPFLGFCYEKKKRAL--IYEFMPNGSLDQYIYDHESSNGKRTLE 302
++EV + H NIV + ++ L + E+ G L I + + ++ L+
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLD 109
Query: 303 WRTVYQIAVGIARGLEYLHRGCN--IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKK 360
V ++ + L+ HR + ++H D+KP N+ LD K+ DFGLA+
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169
Query: 361 ESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEM 404
E F + GT Y++PE R + KSD++S G +++E+
Sbjct: 170 EDFAK--EFVGTPYYMSPEQMNRM--SYNEKSDIWSLGCLLYEL 209
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI FGLA+ T+ +
Sbjct: 131 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE----- 178
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 179 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E+ P G + + H G+ + Y A I EYLH ++ +++ D+K
Sbjct: 119 MVLEYAPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 169
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ K++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 170 PENLLIDQQGYIKVADFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 222
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 223 WALGVLIYEMAAG 235
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 211 LGQGGYADVYKG-TLPDGRLVAVKVMK-NLKDNGE---EFINEVASISRTSHVNIVPFLG 265
LG GG ++V+ L D R VAVKV++ +L + F E + + +H IV
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 266 FCYEKKKRA----LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
+ ++ E++ +L ++ KR +E + + L + H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE------VIADACQALNFSH 133
Query: 322 RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ-TEKKESFISMLDTRGTAGYIAPEV 380
+ I+H D+KP NI + K+ DFG+A+ + S GTA Y++PE
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE- 189
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIG 407
V +SDVYS G +++E++ G
Sbjct: 190 -QARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 114/281 (40%), Gaps = 34/281 (12%)
Query: 206 SFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKD----NGEEFINEVASISRTSHVNIV 261
+F KL + +++KG G + VKV+K ++D +F E + SH N++
Sbjct: 13 NFLTKLNENHSGELWKGRW-QGNDIVVKVLK-VRDWSTRKSRDFNEECPRLRIFSHPNVL 70
Query: 262 PFLGFCYEKKK--RALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
P LG C LI + P GSL Y HE +N ++ + A+ ARG +
Sbjct: 71 PVLGACQSPPAPHPTLITHWXPYGSL--YNVLHEGTNF--VVDQSQAVKFALDXARGXAF 126
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH + H + ++ +DED +IS + K SF S A ++APE
Sbjct: 127 LHTLEPLIPRHA-LNSRSVXIDEDXTARIS------XADVKFSFQSPGRXYAPA-WVAPE 178
Query: 380 VFCRHFGGVSHKS-DVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQL 438
+ + +S D +S+ +++ E+V + P A E L
Sbjct: 179 ALQKKPEDTNRRSADXWSFAVLLWELV-------------TREVPFADLSNXEIGXKVAL 225
Query: 439 DGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVEMLE 479
+G+ ++ + + C P RP +V +LE
Sbjct: 226 EGLRPTIPPGISPHVSKLXKICXNEDPAKRPKFDXIVPILE 266
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 94/210 (44%), Gaps = 32/210 (15%)
Query: 211 LGQGGYADVY----KGTLPDGRLVAVKVMKN----LKDNGEEFINEVASISRTSHVNIVP 262
LG+G + V K T GR A+K+++ KD + E + T H P
Sbjct: 16 LGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH----P 68
Query: 263 FL---GFCYEKKKR-ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
FL + ++ R + E+ G L + H S T E Y I LE
Sbjct: 69 FLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFY--GAEIVSALE 122
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
YLH + +V+ DIK N+ LD+D KI+DFGL K E +M GT Y+AP
Sbjct: 123 YLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAP 177
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
EV + G + D + G++++EM+ GR
Sbjct: 178 EVLEDNDYGRA--VDWWGLGVVMYEMMCGR 205
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 94/210 (44%), Gaps = 32/210 (15%)
Query: 211 LGQGGYADVY----KGTLPDGRLVAVKVMKN----LKDNGEEFINEVASISRTSHVNIVP 262
LG+G + V K T GR A+K+++ KD + E + T H P
Sbjct: 13 LGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH----P 65
Query: 263 FL---GFCYEKKKR-ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
FL + ++ R + E+ G L + H S T E Y I LE
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFY--GAEIVSALE 119
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
YLH + +V+ DIK N+ LD+D KI+DFGL K E +M GT Y+AP
Sbjct: 120 YLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAP 174
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
EV + G + D + G++++EM+ GR
Sbjct: 175 EVLEDNDYGRA--VDWWGLGVVMYEMMCGR 202
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 210 KLGQGGYADVYKGTLPD-GRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLG 265
K+G+G Y V+K D G++VA+K +D+ + + E+ + + H N+V L
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
K++ L++E+ + L HE +R + V I + + + H+
Sbjct: 70 VFRRKRRLHLVFEYCDHTVL------HELDRYQRGVPEHLVKSITWQTLQAVNFCHKH-- 121
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
+H D+KP NI + + K+ DFG A+ + D T Y +PE+
Sbjct: 122 -NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD--DEVATRWYRSPELLV--- 175
Query: 386 GGVSH--KSDVYSYGMMIHEMVIG 407
G + DV++ G + E++ G
Sbjct: 176 GDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 94/210 (44%), Gaps = 32/210 (15%)
Query: 211 LGQGGYADVY----KGTLPDGRLVAVKVMKN----LKDNGEEFINEVASISRTSHVNIVP 262
LG+G + V K T GR A+K+++ KD + E + T H P
Sbjct: 13 LGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH----P 65
Query: 263 FL---GFCYEKKKR-ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
FL + ++ R + E+ G L + H S T E Y I LE
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFY--GAEIVSALE 119
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
YLH + +V+ DIK N+ LD+D KI+DFGL K E +M GT Y+AP
Sbjct: 120 YLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAP 174
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
EV + G + D + G++++EM+ GR
Sbjct: 175 EVLEDNDYGRA--VDWWGLGVVMYEMMCGR 202
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 94/210 (44%), Gaps = 32/210 (15%)
Query: 211 LGQGGYADVY----KGTLPDGRLVAVKVMKN----LKDNGEEFINEVASISRTSHVNIVP 262
LG+G + V K T GR A+K+++ KD + E + T H P
Sbjct: 13 LGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH----P 65
Query: 263 FL---GFCYEKKKR-ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
FL + ++ R + E+ G L + H S T E Y I LE
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFY--GAEIVSALE 119
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
YLH + +V+ DIK N+ LD+D KI+DFGL K E +M GT Y+AP
Sbjct: 120 YLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAP 174
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
EV + G + D + G++++EM+ GR
Sbjct: 175 EVLEDNDYGRA--VDWWGLGVVMYEMMCGR 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 94/210 (44%), Gaps = 32/210 (15%)
Query: 211 LGQGGYADVY----KGTLPDGRLVAVKVMKN----LKDNGEEFINEVASISRTSHVNIVP 262
LG+G + V K T GR A+K+++ KD + E + T H P
Sbjct: 18 LGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH----P 70
Query: 263 FL---GFCYEKKKR-ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
FL + ++ R + E+ G L + H S T E Y I LE
Sbjct: 71 FLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFY--GAEIVSALE 124
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
YLH + +V+ DIK N+ LD+D KI+DFGL K E +M GT Y+AP
Sbjct: 125 YLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAP 179
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
EV + G + D + G++++EM+ GR
Sbjct: 180 EVLEDNDYGRA--VDWWGLGVVMYEMMCGR 207
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 94/210 (44%), Gaps = 32/210 (15%)
Query: 211 LGQGGYADVY----KGTLPDGRLVAVKVMKN----LKDNGEEFINEVASISRTSHVNIVP 262
LG+G + V K T GR A+K+++ KD + E + T H P
Sbjct: 13 LGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH----P 65
Query: 263 FL---GFCYEKKKR-ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
FL + ++ R + E+ G L + H S T E Y I LE
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFY--GAEIVSALE 119
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
YLH + +V+ DIK N+ LD+D KI+DFGL K E +M GT Y+AP
Sbjct: 120 YLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAP 174
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
EV + G + D + G++++EM+ GR
Sbjct: 175 EVLEDNDYGRA--VDWWGLGVVMYEMMCGR 202
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI D GLA+ T+ +
Sbjct: 131 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE----- 178
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 179 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 211 LGQGGYADVYK----GTLPDGRLVAVKVMK------NLKDNGEEFINEVASISRTSHVNI 260
LG+GGY V++ G++ A+KV+K N KD E + H I
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHT-KAERNILEEVKHPFI 83
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
V + K LI E++ G L + G + Y + +A G +L
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGEL----FMQLEREGIFMEDTACFYLAEISMALG--HL 137
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
H+ I++ D+KP NI L+ K++DFGL K++ + GT Y+APE+
Sbjct: 138 HQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFC--GTIEYMAPEI 192
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIG 407
R G + D +S G ++++M+ G
Sbjct: 193 LMR--SGHNRAVDWWSLGALMYDMLTG 217
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 94/210 (44%), Gaps = 32/210 (15%)
Query: 211 LGQGGYADVY----KGTLPDGRLVAVKVMKN----LKDNGEEFINEVASISRTSHVNIVP 262
LG+G + V K T GR A+K+++ KD + E + T H P
Sbjct: 13 LGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH----P 65
Query: 263 FL---GFCYEKKKR-ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
FL + ++ R + E+ G L + H S T E Y I LE
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARFY--GAEIVSALE 119
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
YLH + +V+ DIK N+ LD+D KI+DFGL K E +M GT Y+AP
Sbjct: 120 YLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAP 174
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
EV + G + D + G++++EM+ GR
Sbjct: 175 EVLEDNDYGRA--VDWWGLGVVMYEMMCGR 202
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 211 LGQGGYADVYKGTLPDGR-LVAVKVM--KNLKDNGEE--FINEVASISRTSHVNIVPFLG 265
LG+G + +VY +VA+KV+ ++ G E E+ + H NI+
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 266 FCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCN 325
+ Y++++ LI E+ P G L + + + + +RT I +A L Y H
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTA------TIMEELADALMYCH---G 141
Query: 326 IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
+++H DIKP N+ L KI+DFG + + GT Y+ PE+
Sbjct: 142 KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPS----LRRKTMCGTLDYLPPEM----I 193
Query: 386 GGVSH--KSDVYSYGMMIHEMVIG 407
G H K D++ G++ +E+++G
Sbjct: 194 EGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 24/207 (11%)
Query: 211 LGQGGYADVYK----GTLPDGRLVAVKVMK------NLKDNGEEFINEVASISRTSHVNI 260
LG+GGY V++ G++ A+KV+K N KD E + H I
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHT-KAERNILEEVKHPFI 83
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
V + K LI E++ G L + G + Y + +A G +L
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGEL----FMQLEREGIFMEDTACFYLAEISMALG--HL 137
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
H+ I++ D+KP NI L+ K++DFGL K++ + GT Y+APE+
Sbjct: 138 HQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFC--GTIEYMAPEI 192
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIG 407
R G + D +S G ++++M+ G
Sbjct: 193 LMR--SGHNRAVDWWSLGALMYDMLTG 217
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 9/96 (9%)
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGT 372
I RGL+Y+H I+H D+KP N+ ++ED KI DF LA+ T+ + M T
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE-----MTGYVAT 185
Query: 373 AGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 186 RWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E+ P G + + H G+ Y A I EYLH ++ +++ D+K
Sbjct: 119 MVMEYAPGGEM----FSHLRRIGRFXEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 169
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ K++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 170 PENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 222
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 223 WALGVLIYEMAAG 235
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI D GLA+ T+ +
Sbjct: 131 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE----- 178
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 179 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 25/218 (11%)
Query: 204 TKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPF 263
T + +G+G + +V++G G VAVK+ + ++ E+ H NI+ F
Sbjct: 43 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGF 101
Query: 264 LGFCYEKK----KRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ + + L+ ++ +GSL Y+ + T+ + ++A+ A GL +
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-------NRYTVTVEGMIKLALSTASGLAH 154
Query: 320 LHR---GCNIR--IVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR--GT 372
LH G + I H D+K NI + ++ I+D GLA + + I + GT
Sbjct: 155 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 214
Query: 373 AGYIAPEVF-----CRHFGGVSHKSDVYSYGMMIHEMV 405
Y+APEV +HF ++D+Y+ G++ E+
Sbjct: 215 KRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFWEIA 251
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 25/217 (11%)
Query: 204 TKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPF 263
T + +G+G + +V++G G VAVK+ + ++ E+ H NI+ F
Sbjct: 5 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGF 63
Query: 264 LGFCYEKK----KRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ + + L+ ++ +GSL Y+ + T+ + ++A+ A GL +
Sbjct: 64 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-------NRYTVTVEGMIKLALSTASGLAH 116
Query: 320 LHR---GCNIR--IVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR--GT 372
LH G + I H D+K NI + ++ I+D GLA + + I + GT
Sbjct: 117 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 176
Query: 373 AGYIAPEVF-----CRHFGGVSHKSDVYSYGMMIHEM 404
Y+APEV +HF ++D+Y+ G++ E+
Sbjct: 177 KRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFWEI 212
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 41/215 (19%)
Query: 211 LGQGGYADVY----KGTLPDGRLVAVKVMKN----LKDNGEEFINEVASISRTSHVNIVP 262
LG+G + V K T GR A+K++K KD + E + + H P
Sbjct: 159 LGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH----P 211
Query: 263 FLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNG---------KRTLEWRTVYQIAVGI 313
FL AL Y F + D+ + E +NG +R I
Sbjct: 212 FLT--------ALKYSFQTH---DRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 260
Query: 314 ARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTA 373
L+YLH N+ V+ D+K N+ LD+D KI+DFGL K+ K + +M GT
Sbjct: 261 VSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKTFCGTP 316
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
Y+APEV + G + D + G++++EM+ GR
Sbjct: 317 EYLAPEVLEDNDYGRA--VDWWGLGVVMYEMMCGR 349
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 41/215 (19%)
Query: 211 LGQGGYADVY----KGTLPDGRLVAVKVMKN----LKDNGEEFINEVASISRTSHVNIVP 262
LG+G + V K T GR A+K++K KD + E + + H P
Sbjct: 156 LGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH----P 208
Query: 263 FLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNG---------KRTLEWRTVYQIAVGI 313
FL AL Y F + D+ + E +NG +R I
Sbjct: 209 FLT--------ALKYSFQTH---DRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 257
Query: 314 ARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTA 373
L+YLH N+ V+ D+K N+ LD+D KI+DFGL K+ K + +M GT
Sbjct: 258 VSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKTFCGTP 313
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
Y+APEV + G + D + G++++EM+ GR
Sbjct: 314 EYLAPEVLEDNDYGRA--VDWWGLGVVMYEMMCGR 346
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 41/215 (19%)
Query: 211 LGQGGYADVY----KGTLPDGRLVAVKVMKN----LKDNGEEFINEVASISRTSHVNIVP 262
LG+G + V K T GR A+K++K KD + E + + H P
Sbjct: 18 LGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH----P 70
Query: 263 FLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNG---------KRTLEWRTVYQIAVGI 313
FL AL Y F + D+ + E +NG +R I
Sbjct: 71 FL--------TALKYSFQTH---DRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 119
Query: 314 ARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTA 373
L+YLH N+ V+ D+K N+ LD+D KI+DFGL K+ K + +M GT
Sbjct: 120 VSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKXFCGTP 175
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
Y+APEV + G + D + G++++EM+ GR
Sbjct: 176 EYLAPEVLEDNDYGRA--VDWWGLGVVMYEMMCGR 208
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E++P G + + H G+ + Y A I EYLH ++ +++ D+K
Sbjct: 111 MVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 161
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ +++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 162 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 214
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 215 WALGVLIYEMAAG 227
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E++P G + + H G+ + Y A I EYLH ++ +++ D+K
Sbjct: 118 MVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 168
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ +++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 221
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 222 WALGVLIYEMAAG 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E++P G + + H G+ + Y A I EYLH ++ +++ D+K
Sbjct: 119 MVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 169
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ +++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 222
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 223 WALGVLIYEMAAG 235
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 41/215 (19%)
Query: 211 LGQGGYADVY----KGTLPDGRLVAVKVMKN----LKDNGEEFINEVASISRTSHVNIVP 262
LG+G + V K T GR A+K++K KD + E + + H P
Sbjct: 16 LGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH----P 68
Query: 263 FLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNG---------KRTLEWRTVYQIAVGI 313
FL AL Y F + D+ + E +NG +R I
Sbjct: 69 FL--------TALKYSFQTH---DRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 117
Query: 314 ARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTA 373
L+YLH N+ V+ D+K N+ LD+D KI+DFGL K+ K + +M GT
Sbjct: 118 VSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKXFCGTP 173
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
Y+APEV + G + D + G++++EM+ GR
Sbjct: 174 EYLAPEVLEDNDYGRA--VDWWGLGVVMYEMMCGR 206
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E+ P G + + H G+ Y A I EYLH ++ +++ D+K
Sbjct: 118 MVMEYAPGGEM----FSHLRRIGRFXEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 168
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ K++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 169 PENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 221
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 222 WALGVLIYEMAAG 234
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 25/217 (11%)
Query: 204 TKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPF 263
T + +G+G + +V++G G VAVK+ + ++ E+ H NI+ F
Sbjct: 30 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGF 88
Query: 264 LGFCYEKK----KRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ + + L+ ++ +GSL Y+ + T+ + ++A+ A GL +
Sbjct: 89 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-------NRYTVTVEGMIKLALSTASGLAH 141
Query: 320 LHR---GCNIR--IVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR--GT 372
LH G + I H D+K NI + ++ I+D GLA + + I + GT
Sbjct: 142 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 201
Query: 373 AGYIAPEVF-----CRHFGGVSHKSDVYSYGMMIHEM 404
Y+APEV +HF ++D+Y+ G++ E+
Sbjct: 202 KRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFWEI 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E++P G + + H G+ + Y A I EYLH ++ +++ D+K
Sbjct: 118 MVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 168
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ +++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 221
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 222 WALGVLIYEMAAG 234
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 10/164 (6%)
Query: 245 FINEVASISRTSHVNIVPFLGFCYEKKKRAL--IYEFMPNGSLDQYIYDHESSNGKRTLE 302
++EV + H NIV + ++ L + E+ G L I + + ++ L+
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLD 109
Query: 303 WRTVYQIAVGIARGLEYLHRGCN--IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKK 360
V ++ + L+ HR + ++H D+KP N+ LD K+ DFGLA+
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169
Query: 361 ESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEM 404
SF GT Y++PE R + KSD++S G +++E+
Sbjct: 170 TSFAKTF--VGTPYYMSPEQMNRM--SYNEKSDIWSLGCLLYEL 209
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 41/215 (19%)
Query: 211 LGQGGYADVY----KGTLPDGRLVAVKVMKN----LKDNGEEFINEVASISRTSHVNIVP 262
LG+G + V K T GR A+K++K KD + E + + H P
Sbjct: 17 LGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH----P 69
Query: 263 FLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNG---------KRTLEWRTVYQIAVGI 313
FL AL Y F + D+ + E +NG +R I
Sbjct: 70 FL--------TALKYSFQTH---DRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI 118
Query: 314 ARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTA 373
L+YLH N+ V+ D+K N+ LD+D KI+DFGL K+ K + +M GT
Sbjct: 119 VSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKXFCGTP 174
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
Y+APEV + G + D + G++++EM+ GR
Sbjct: 175 EYLAPEVLEDNDYGRA--VDWWGLGVVMYEMMCGR 207
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E++P G + + H G+ + Y A I EYLH ++ +++ D+K
Sbjct: 119 MVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 169
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ +++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 222
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 223 WALGVLIYEMAAG 235
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 10/164 (6%)
Query: 245 FINEVASISRTSHVNIVPFLGFCYEKKKRAL--IYEFMPNGSLDQYIYDHESSNGKRTLE 302
++EV + H NIV + ++ L + E+ G L I + + ++ L+
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLD 109
Query: 303 WRTVYQIAVGIARGLEYLHRGCN--IRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKK 360
V ++ + L+ HR + ++H D+KP N+ LD K+ DFGLA+
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169
Query: 361 ESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEM 404
SF GT Y++PE R + KSD++S G +++E+
Sbjct: 170 TSFAKAF--VGTPYYMSPEQMNRM--SYNEKSDIWSLGCLLYEL 209
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 25/217 (11%)
Query: 204 TKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPF 263
T + +G+G + +V++G G VAVK+ + ++ E+ H NI+ F
Sbjct: 4 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGF 62
Query: 264 LGFCYEKK----KRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ + + L+ ++ +GSL Y+ + T+ + ++A+ A GL +
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-------NRYTVTVEGMIKLALSTASGLAH 115
Query: 320 LHR---GCNIR--IVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR--GT 372
LH G + I H D+K NI + ++ I+D GLA + + I + GT
Sbjct: 116 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 175
Query: 373 AGYIAPEVF-----CRHFGGVSHKSDVYSYGMMIHEM 404
Y+APEV +HF ++D+Y+ G++ E+
Sbjct: 176 KRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFWEI 211
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E++P G + + H G+ + Y A I EYLH ++ +++ D+K
Sbjct: 119 MVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 169
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ +++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 222
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 223 WALGVLIYEMAAG 235
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 25/217 (11%)
Query: 204 TKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPF 263
T + +G+G + +V++G G VAVK+ + ++ E+ H NI+ F
Sbjct: 7 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGF 65
Query: 264 LGFCYEKK----KRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ + + L+ ++ +GSL Y+ + T+ + ++A+ A GL +
Sbjct: 66 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-------NRYTVTVEGMIKLALSTASGLAH 118
Query: 320 LHR---GCNIR--IVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR--GT 372
LH G + I H D+K NI + ++ I+D GLA + + I + GT
Sbjct: 119 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 178
Query: 373 AGYIAPEVF-----CRHFGGVSHKSDVYSYGMMIHEM 404
Y+APEV +HF ++D+Y+ G++ E+
Sbjct: 179 KRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFWEI 214
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E++P G + + H G+ + Y A I EYLH ++ +++ D+K
Sbjct: 118 MVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 168
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ +++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 221
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 222 WALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E++P G + + H G+ + Y A I EYLH ++ +++ D+K
Sbjct: 119 MVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 169
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ +++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 222
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 223 WALGVLIYEMAAG 235
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E++P G + + H G+ + Y A I EYLH ++ +++ D+K
Sbjct: 118 MVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 168
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ +++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 221
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 222 WALGVLIYEMAAG 234
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 33/215 (15%)
Query: 211 LGQGGYADVY----KGTLPDGRLVAVKVMKN----LKDNGEEFINEVASISRTSHVNIVP 262
LG+G + V KGT L A+K++K D+ E + E ++ +
Sbjct: 27 LGKGSFGKVMLADRKGT---EELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLT 83
Query: 263 FLGFCYEKKKRA-LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
L C++ R + E++ G L +Y H GK Y A I+ GL +LH
Sbjct: 84 QLHSCFQTVDRLYFVMEYVNGGDL---MY-HIQQVGKFKEPQAVFY--AAEISIGLFFLH 137
Query: 322 -RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR---GTAGYIA 377
RG I++ D+K N+ LD + KI+DFG+ KE + + TR GT YIA
Sbjct: 138 KRG----IIYRDLKLDNVMLDSEGHIKIADFGMC-----KEHMMDGVTTREFCGTPDYIA 188
Query: 378 PEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNAD 412
PE+ G S D ++YG++++EM+ G+ D
Sbjct: 189 PEIIAYQPYGKS--VDWWAYGVLLYEMLAGQPPFD 221
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
+YQI RGL+Y+H I+H D+KP N+ ++ED KI D GLA+ T+ +
Sbjct: 131 IYQIL----RGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE----- 178
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APE+ ++ + D++S G ++ E++ GR
Sbjct: 179 MTGYVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E++P G + + H G+ + Y A I EYLH ++ +++ D+K
Sbjct: 118 MVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 168
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ +++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 221
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 222 WALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E++P G + + H G+ + Y A I EYLH ++ +++ D+K
Sbjct: 118 MVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 168
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ +++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 221
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 222 WALGVLIYEMAAG 234
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 25/218 (11%)
Query: 204 TKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPF 263
T + +G+G + +V++G G VAVK+ + ++ E+ H NI+ F
Sbjct: 10 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGF 68
Query: 264 LGFCYEKK----KRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ + + L+ ++ +GSL Y+ + T+ + ++A+ A GL +
Sbjct: 69 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-------NRYTVTVEGMIKLALSTASGLAH 121
Query: 320 LHR---GCNIR--IVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR--GT 372
LH G + I H D+K NI + ++ I+D GLA + + I + GT
Sbjct: 122 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 181
Query: 373 AGYIAPEVF-----CRHFGGVSHKSDVYSYGMMIHEMV 405
Y+APEV +HF ++D+Y+ G++ E+
Sbjct: 182 KRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFWEIA 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 47/308 (15%)
Query: 211 LGQGGYADVYKGTLPDGRL---VAVKVMK-NLKDNGE---EFINEVASISRTSHVNIVPF 263
LG GG ++V+ D RL VAVKV++ +L + F E + + +H IV
Sbjct: 20 LGFGGMSEVHLAR--DLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 264 LGFCYEKKKRA----LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ ++ E++ +L ++ KR +E + + L +
Sbjct: 78 YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE------VIADACQALNF 131
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ-TEKKESFISMLDTRGTAGYIAP 378
H+ I+H D+KP NI + K+ DFG+A+ + S GTA Y++P
Sbjct: 132 SHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMVIGRK--NADVKVSCSSEYF------PNAIYKQI 430
E V +SDVYS G +++E++ G D VS + ++ P+A ++ +
Sbjct: 189 E--QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL 246
Query: 431 ETEYDFQLDGVV-------TEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE---MLEG 480
+ LD VV E + A +M + PP+ P + E +L
Sbjct: 247 SAD----LDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAERTSLLSS 302
Query: 481 SIENLQIP 488
+ NL P
Sbjct: 303 AAGNLSGP 310
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 310 AVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT 369
A I EYLH ++ +++ D+KP N+ +D+ +++DFG AK+ + + ++
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLA---- 199
Query: 370 RGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
GT Y+APE+ G + D ++ G++I+EM G
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E++P G + + H G+ + Y A I EYLH ++ +++ D+K
Sbjct: 139 MVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 189
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ +++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 190 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 242
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 243 WALGVLIYEMAAG 255
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 111/246 (45%), Gaps = 35/246 (14%)
Query: 209 DKLGQGGYADVYKGTLPDG-RLVAVKVMKNLKDNGE----EFINEVASISRTSHVNIVPF 263
+K+G+G Y V+K + +VA+K ++ L D+ E + E+ + H NIV
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVR-LDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRG 323
+ KK L++EF + L +Y +S NG L+ V + +GL + H
Sbjct: 67 HDVLHSDKKLTLVFEFC-DQDLKKYF---DSCNGD--LDPEIVKSFLFQLLKGLGFCH-- 118
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCR 383
+ ++H D+KP N+ ++ + K++DFGLA+ S T Y P+V
Sbjct: 119 -SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSA--EVVTLWYRPPDVL-- 173
Query: 384 HFGG--VSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFP-NAIYKQIETEYDFQLDG 440
FG S D++S G + E+ + + FP N + Q++ F+L G
Sbjct: 174 -FGAKLYSTSIDMWSAGCIFAEL----------ANAARPLFPGNDVDDQLKRI--FRLLG 220
Query: 441 VVTEEE 446
TEE+
Sbjct: 221 TPTEEQ 226
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 310 AVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT 369
A I EYLH ++ +++ D+KP N+ +DE +++DFG AK+ + + +
Sbjct: 134 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC---- 186
Query: 370 RGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
GT Y+APE+ G + D ++ G++I+EM G
Sbjct: 187 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 221
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 17/147 (11%)
Query: 266 FC--YEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRG 323
FC + K ++ E+MP G L + SN +W Y V +A L+ +H
Sbjct: 141 FCAFQDDKYLYMVMEYMPGGDLVNLM-----SNYDVPEKWAKFYTAEVVLA--LDAIH-- 191
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR-GTAGYIAPEVFC 382
++ ++H D+KP N+ LD+ K++DFG + + E+ + DT GT YI+PEV
Sbjct: 192 -SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD--ETGMVHCDTAVGTPDYISPEVLK 248
Query: 383 RHFGG--VSHKSDVYSYGMMIHEMVIG 407
G + D +S G+ + EM++G
Sbjct: 249 SQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 125/267 (46%), Gaps = 46/267 (17%)
Query: 209 DKLGQGGYADVYKGT-LPDGRLVAVKVM--KNLKDNGEEFINEVASISRT-SHVNIVPFL 264
++LG+G ++ V + +P G+ A K++ K L + + A I R H NIV
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
E+ L+++ + G L + I E+ + + I + LE ++ C
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIV---------AREYYSEADASHCIQQILESVNH-C 119
Query: 325 NIR-IVHLDIKPHNIRL---DEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
++ IVH D+KP N+ L + K++DFGLA + + + + GT GY++PEV
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ--AWFGFAGTPGYLSPEV 177
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFP------NAIYKQIET-E 433
+ G D+++ G++++ +++G Y P + +Y+QI+
Sbjct: 178 LRKDPYG--KPVDMWACGVILYILLVG-------------YPPFWDEDQHRLYQQIKAGA 222
Query: 434 YDF---QLDGVVTEEEKEMAKKMILVS 457
YDF + D VT E K++ KM+ ++
Sbjct: 223 YDFPSPEWD-TVTPEAKDLINKMLTIN 248
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E++P G + + H G+ + Y A I EYLH ++ +++ D+K
Sbjct: 119 MVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 169
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ +++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRVKGRTWTLC-----GTPEYLAPEIILSK--GYNKAVDW 222
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 223 WALGVLIYEMAAG 235
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E+ P G + + H G+ + Y A I EYLH ++ +++ D+K
Sbjct: 118 MVMEYAPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 168
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ +++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 169 PENLMIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 221
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 222 WALGVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E++P G + + H G+ + Y A I EYLH ++ +++ D+K
Sbjct: 104 MVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 154
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ +++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 155 PENLLIDQQGYIQVTDFGFAKRVKGRTWTLC-----GTPEYLAPEIILSK--GYNKAVDW 207
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 208 WALGVLIYEMAAG 220
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E++P G + + H G+ Y A I EYLH ++ +++ D+K
Sbjct: 111 MVMEYVPGGEM----FSHLRRIGRFXEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 161
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ +++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 162 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 214
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 215 WALGVLIYEMAAG 227
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 121/266 (45%), Gaps = 44/266 (16%)
Query: 209 DKLGQGGYADVYKGT-LPDGRLVAVKVM--KNLKDNGEEFINEVASISRT-SHVNIVPFL 264
++LG+G ++ V + + G+ A K++ K L + + A I R H NIV
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
E+ LI++ + G L + I E+ + + I + LE +
Sbjct: 88 DSISEEGHHYLIFDLVTGGELFEDIV---------AREYYSEADASHCIQQILEAVLHCH 138
Query: 325 NIRIVHLDIKPHNIRLDEDF---CPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF 381
+ +VH D+KP N+ L K++DFGLA + E ++ + GT GY++PEV
Sbjct: 139 QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ--AWFGFAGTPGYLSPEVL 196
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFP------NAIYKQIET-EY 434
+ G D+++ G++++ +++G Y P + +Y+QI+ Y
Sbjct: 197 RKDPYG--KPVDLWACGVILYILLVG-------------YPPFWDEDQHRLYQQIKAGAY 241
Query: 435 DF---QLDGVVTEEEKEMAKKMILVS 457
DF + D VT E K++ KM+ ++
Sbjct: 242 DFPSPEWD-TVTPEAKDLINKMLTIN 266
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E++P G + + H G+ Y A I EYLH ++ +++ D+K
Sbjct: 119 MVMEYVPGGEM----FSHLRRIGRFXEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 169
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ +++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 170 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 222
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 223 WALGVLIYEMAAG 235
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E++P G + + H G+ Y A I EYLH ++ +++ D+K
Sbjct: 118 MVMEYVPGGEM----FSHLRRIGRFXEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 168
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ +++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 221
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 222 WALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 275 LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
++ E++P G + + H G+ Y A I EYLH ++ +++ D+K
Sbjct: 118 MVMEYVPGGEM----FSHLRRIGRFXEPHARFY--AAQIVLTFEYLH---SLDLIYRDLK 168
Query: 335 PHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDV 394
P N+ +D+ +++DFG AK+ + + + GT Y+APE+ G + D
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-----GTPEYLAPEIILSK--GYNKAVDW 221
Query: 395 YSYGMMIHEMVIG 407
++ G++I+EM G
Sbjct: 222 WALGVLIYEMAAG 234
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 47/308 (15%)
Query: 211 LGQGGYADVYKGTLPDGRL---VAVKVMK-NLKDNGE---EFINEVASISRTSHVNIVPF 263
LG GG ++V+ D RL VAVKV++ +L + F E + + +H IV
Sbjct: 20 LGFGGMSEVHLAR--DLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 264 LGFCYEKKKRA----LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ ++ E++ +L ++ KR +E + + L +
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE------VIADACQALNF 131
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ-TEKKESFISMLDTRGTAGYIAP 378
H+ I+H D+KP NI + K+ DFG+A+ + S GTA Y++P
Sbjct: 132 SHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMVIGRK--NADVKVSCSSEYF------PNAIYKQI 430
E V +SDVYS G +++E++ G D VS + ++ P+A ++ +
Sbjct: 189 E--QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL 246
Query: 431 ETEYDFQLDGVV-------TEEEKEMAKKMILVSLWCIQTHPPDRPSMTKVVE---MLEG 480
+ LD VV E + A +M + PP+ P + E +L
Sbjct: 247 SAD----LDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAPKVLTDAERTSLLSS 302
Query: 481 SIENLQIP 488
+ NL P
Sbjct: 303 AAGNLSGP 310
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 310 AVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT 369
A I EYLH ++ +++ D+KP N+ +D+ +++DFG AK+ + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLX---- 199
Query: 370 RGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
GT Y+APE+ G + D ++ G++I+EM G
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 125/267 (46%), Gaps = 46/267 (17%)
Query: 209 DKLGQGGYADVYKGT-LPDGRLVAVKVM--KNLKDNGEEFINEVASISRT-SHVNIVPFL 264
++LG+G ++ V + +P G+ A K++ K L + + A I R H NIV
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
E+ L+++ + G L + I E+ + + I + LE ++ C
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIV---------AREYYSEADASHCIQQILESVNH-C 119
Query: 325 NIR-IVHLDIKPHNIRL---DEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEV 380
++ IVH D+KP N+ L + K++DFGLA + + + + GT GY++PEV
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ--AWFGFAGTPGYLSPEV 177
Query: 381 FCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFP------NAIYKQIET-E 433
+ G D+++ G++++ +++G Y P + +Y+QI+
Sbjct: 178 LRKDPYG--KPVDMWACGVILYILLVG-------------YPPFWDEDQHRLYQQIKAGA 222
Query: 434 YDF---QLDGVVTEEEKEMAKKMILVS 457
YDF + D VT E K++ KM+ ++
Sbjct: 223 YDFPSPEWD-TVTPEAKDLINKMLTIN 248
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 125/294 (42%), Gaps = 45/294 (15%)
Query: 208 SDKLGQGGYADVYKG-TLPDGRLVAVKVMKNLK---DNGEEFINEVASISRTSHVNIVPF 263
S +LG+G +A V + + G+ A K +K + D E ++E+A + V
Sbjct: 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVIN 93
Query: 264 LGFCYEKKKRA-LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
L YE LI E+ G I+ + V ++ I G+ YLH+
Sbjct: 94 LHEVYENTSEIILILEYAAGGE----IFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ 149
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCP----KISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
IVHLD+KP NI L + P KI DFG++++ + + GT Y+AP
Sbjct: 150 N---NIVHLDLKPQNILLSSIY-PLGDIKIVDFGMSRKIGHA---CELREIMGTPEYLAP 202
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMV------IGRKN-------ADVKVSCSSEYFPNA 425
E+ ++ ++ +D+++ G++ + ++ +G N + V V S E F +
Sbjct: 203 EIL--NYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSV 260
Query: 426 IYKQIETEYDFQLDGVVTEEEKEMAKKMILVSLWCIQT------HPPDRPSMTK 473
Q+ T DF +V EK ++ L W Q HP + S ++
Sbjct: 261 --SQLAT--DFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSSSSQ 310
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 310 AVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT 369
A I EYLH ++ +++ D+KP N+ +D+ +++DFG AK+ + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 370 RGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
GT Y+APE+ G + D ++ G++I+EM G
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 206 SFSDKLGQGGYADVYKGTLPD-GRLVAVKVMKN---LKDNGEEFI---NEVASISRTSHV 258
F LG+G + V + + G L AVKV+K L+D+ E + S++R
Sbjct: 26 EFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH-- 83
Query: 259 NIVPFLG---FCYEKKKRAL-IYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIA 314
PFL C++ R + EF+ G L +I +R E R + A I
Sbjct: 84 ---PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI-----QKSRRFDEARARF-YAAEII 134
Query: 315 RGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAG 374
L +LH + I++ D+K N+ LD + K++DFG+ K E + ++ GT
Sbjct: 135 SALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPD 189
Query: 375 YIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
YIAPE+ G + D ++ G++++EM+ G
Sbjct: 190 YIAPEILQEMLYGPA--VDWWAMGVLLYEMLCG 220
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 310 AVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT 369
A I EYLH ++ +++ D+KP N+ +D+ +++DFG AK+ + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 370 RGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
GT Y+APE+ G + D ++ G++I+EM G
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 310 AVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT 369
A I EYLH ++ +++ D+KP N+ +D+ +++DFG AK+ + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 370 RGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
GT Y+APE+ G + D ++ G++I+EM G
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 310 AVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT 369
A I EYLH ++ +++ D+KP N+ +D+ +++DFG AK+ + + +
Sbjct: 142 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 194
Query: 370 RGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
GT Y+APE+ G + D ++ G++I+EM G
Sbjct: 195 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 229
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 310 AVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT 369
A I EYLH ++ +++ D+KP N+ +D+ +++DFG AK+ + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 370 RGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
GT Y+APE+ G + D ++ G++I+EM G
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 310 AVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT 369
A I EYLH ++ +++ D+KP N+ +D+ +++DFG AK+ + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 370 RGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
GT Y+APE+ G + D ++ G++I+EM G
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 310 AVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT 369
A I EYLH ++ +++ D+KP N+ +D+ +++DFG AK+ + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 370 RGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
GT Y+APE+ G + D ++ G++I+EM G
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 310 AVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT 369
A I EYLH ++ +++ D+KP N+ +D+ +++DFG AK+ + + +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 200
Query: 370 RGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
GT Y+APE+ G + D ++ G++I+EM G
Sbjct: 201 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 235
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 310 AVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT 369
A I EYLH ++ +++ D+KP N+ +D+ +++DFG AK+ + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 370 RGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
GT Y+APE+ G + D ++ G++I+EM G
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 94/213 (44%), Gaps = 23/213 (10%)
Query: 209 DKLGQGGYADVYKGTLP-DGRLVAVKVMKNLKD---NGEEFINEVASISRTSHVNIVPFL 264
+ +G G Y V G+ VA+K + N D N + + E+ + H NI+
Sbjct: 61 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 120
Query: 265 GFCY------EKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLE 318
E K ++ + M L Q I+ S+ TLE V + RGL+
Sbjct: 121 DILRPTVPYGEFKSVYVVLDLM-ESDLHQIIH----SSQPLTLE--HVRYFLYQLLRGLK 173
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ--TEKKESFISMLDTRGTAGYI 376
Y+H + +++H D+KP N+ ++E+ KI DFG+A+ T E M + T Y
Sbjct: 174 YMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 230
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRK 409
APE+ + D++S G + EM+ R+
Sbjct: 231 APELML-SLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 310 AVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT 369
A I EYLH ++ +++ D+KP N+ +D+ +++DFG AK+ + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 370 RGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
GT Y+APE+ G + D ++ G++I+EM G
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 310 AVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT 369
A I EYLH ++ +++ D+KP N+ +D+ +++DFG AK+ + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 370 RGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
GT Y+APE+ G + D ++ G++I+EM G
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 95/210 (45%), Gaps = 29/210 (13%)
Query: 209 DKLGQGGYAD-VYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTS--HVNIVPFLG 265
D LG G VY+G D R VAVK + F + + R S H N++ +
Sbjct: 30 DVLGHGAEGTIVYRGMF-DNRDVAVK---RILPECFSFADREVQLLRESDEHPNVIRY-- 83
Query: 266 FCYEKKKR-ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
FC EK ++ I + +L +Y+ + LE T+ Q GL +LH
Sbjct: 84 FCTEKDRQFQYIAIELCAATLQEYV--EQKDFAHLGLEPITLLQQTTS---GLAHLH--- 135
Query: 325 NIRIVHLDIKPHNIRLDE-----DFCPKISDFGLAKQTE-KKESFISMLDTRGTAGYIAP 378
++ IVH D+KPHNI + ISDFGL K+ + SF GT G+IAP
Sbjct: 136 SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAP 195
Query: 379 EVF---CRHFGGVSHKSDVYSYGMMIHEMV 405
E+ C+ ++ D++S G + + ++
Sbjct: 196 EMLSEDCKE--NPTYTVDIFSAGCVFYYVI 223
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 310 AVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT 369
A I EYLH ++ +++ D+KP N+ +D+ +++DFG AK+ + + +
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 220
Query: 370 RGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
GT Y+APE+ G + D ++ G++I+EM G
Sbjct: 221 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 255
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 210 KLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCYE 269
++G+G Y +V+ G G VAVKV ++ E+ H NI+ F+ +
Sbjct: 44 QIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIK 102
Query: 270 KK----KRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC- 324
+ LI ++ NGSL YD+ S TL+ +++ ++A GL +LH
Sbjct: 103 GTGSWTQLYLITDYHENGSL----YDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 325 ----NIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ--TEKKESFISMLDTRGTAGYIAP 378
I H D+K NI + ++ I+D GLA + ++ E I GT Y+ P
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215
Query: 379 EVFCRHFGGVSHKS----DVYSYGMMIHEM 404
EV +S D+YS+G+++ E+
Sbjct: 216 EVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 310 AVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT 369
A I EYLH ++ +++ D+KP N+ +D+ +++DFG AK+ + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 370 RGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
GT Y+APE+ G + D ++ G++I+EM G
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 15/108 (13%)
Query: 308 QIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML 367
I + IA +E+LH ++H D+KP NI D K+ DFGL ++ E ++L
Sbjct: 168 HIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 368 DTR----------GTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
GT Y++PE H SHK D++S G+++ E++
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQI--HGNNYSHKVDIFSLGLILFELL 270
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 310 AVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT 369
A I EYLH ++ +++ D+KP N+ +D+ +++DFG AK+ + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 370 RGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
GT Y+APE+ G + D ++ G++I+EM G
Sbjct: 200 -GTPEYLAPEIIISK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 102/242 (42%), Gaps = 31/242 (12%)
Query: 188 GSLAPKRFSYSDVRRMTKSFS--------DKLGQGGYADVYKGTLP-DGRLVAVKVMKNL 238
S+A K + R +F + +G G Y V G+ VA+K + N
Sbjct: 31 ASVAAKNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNA 90
Query: 239 KD---NGEEFINEVASISRTSHVNIVPFLGFCY------EKKKRALIYEFMPNGSLDQYI 289
D N + + E+ + H NI+ E K ++ + M L Q I
Sbjct: 91 FDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQII 149
Query: 290 YDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKIS 349
+ S+ TLE V + RGL+Y+H + +++H D+KP N+ ++E+ KI
Sbjct: 150 H----SSQPLTLE--HVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIG 200
Query: 350 DFGLAKQ--TEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
DFG+A+ T E M + T Y APE+ + D++S G + EM+
Sbjct: 201 DFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLS-LHEYTQAIDLWSVGCIFGEMLAR 259
Query: 408 RK 409
R+
Sbjct: 260 RQ 261
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 97/236 (41%), Gaps = 45/236 (19%)
Query: 189 SLAPKRFSYSDVRRMTKSFSDKLGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEE---- 244
S AP S RR+TK LG+G Y +VYK D +K ++ EE
Sbjct: 25 SAAPSATSIDRYRRITK-----LGEGTYGEVYKAI--DTVTNETVAIKRIRLEHEEEGVP 77
Query: 245 --FINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE 302
I EV+ + H NI+ + + LI+E+ N L +Y+ + +
Sbjct: 78 GTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYM------DKNPDVS 130
Query: 303 WRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRL---DEDFCP--KISDFGLAKQ- 356
R + + G+ + H + R +H D+KP N+ L D P KI DFGLA+
Sbjct: 131 MRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187
Query: 357 ----TEKKESFISMLDTRGTAGYIAPEVFC--RHFGGVSHKSDVYSYGMMIHEMVI 406
+ I++ Y PE+ RH+ S D++S + EM++
Sbjct: 188 GIPIRQFTHEIITLW-------YRPPEILLGSRHY---STSVDIWSIACIWAEMLM 233
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 23/185 (12%)
Query: 229 LVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQY 288
LVAVK ++ + E E+ + H NIV F A++ E+ G L +
Sbjct: 46 LVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFER 105
Query: 289 IYDHESSNGKR--TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP 346
I N R E R +Q + G+ Y H +++ H D+K N LD P
Sbjct: 106 I-----CNAGRFSEDEARFFFQQLIS---GVSYAH---AMQVAHRDLKLENTLLDGSPAP 154
Query: 347 --KISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCR--HFGGVSHKSDVYSYGMMIH 402
KI+DFG +K + S + GT YIAPEV + + G V +DV+S G+ ++
Sbjct: 155 RLKIADFGYSKASVLHSQPKSAV---GTPAYIAPEVLLKKEYDGKV---ADVWSCGVTLY 208
Query: 403 EMVIG 407
M++G
Sbjct: 209 VMLVG 213
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 20/166 (12%)
Query: 247 NEVASISRTSHVNIVPFLGFCYEKKKRALIYEF---MPNGSLD-QYIYDHESSNGKRTLE 302
E+ + H N++ L Y+F MP D Q I E S K
Sbjct: 90 RELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY- 148
Query: 303 WRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKES 362
VYQ+ +GL+Y+H +VH D+KP N+ ++ED KI DFGLA+ + +
Sbjct: 149 --LVYQML----KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAE-- 197
Query: 363 FISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APEV + + D++S G ++ EM+ G+
Sbjct: 198 ---MTGYVVTRWYRAPEVILS-WMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 13/103 (12%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFIS 365
VYQ+ +GL+Y+H +VH D+KP N+ ++ED KI DFGLA+ + +
Sbjct: 132 VYQML----KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAE----- 179
Query: 366 MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
M T Y APEV + + D++S G ++ EM+ G+
Sbjct: 180 MTGYVVTRWYRAPEVILS-WMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 83/185 (44%), Gaps = 23/185 (12%)
Query: 229 LVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQY 288
LVAVK ++ + E E+ + H NIV F A++ E+ G L +
Sbjct: 45 LVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFER 104
Query: 289 IYDHESSNGKR--TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP 346
I N R E R +Q + G+ Y H +++ H D+K N LD P
Sbjct: 105 I-----CNAGRFSEDEARFFFQQLIS---GVSYCHA---MQVCHRDLKLENTLLDGSPAP 153
Query: 347 --KISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCR--HFGGVSHKSDVYSYGMMIH 402
KI DFG +K + S T GT YIAPEV + + G V +DV+S G+ ++
Sbjct: 154 RLKICDFGYSKSSVLHSQPKS---TVGTPAYIAPEVLLKKEYDGKV---ADVWSCGVTLY 207
Query: 403 EMVIG 407
M++G
Sbjct: 208 VMLVG 212
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 89/216 (41%), Gaps = 50/216 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 36 AQGIVVAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFT 93
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K ++ E M + +L Q I DHE + +YQ+ VGI ++
Sbjct: 94 PQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMS-------YLLYQMLVGI----KH 141
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + P
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-------------TAGTSFMMTPY 185
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMVIG 407
V R++ G D++S G+++ EM+ G
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 15/152 (9%)
Query: 209 DKLGQGGYADVYKGTLPDGR-LVAVKVMKNLKDNGE----EFINEVASISRTSHVNIVPF 263
+K+G+G Y V+K + +VA+K ++ L D+ E + E+ + H NIV
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVR-LDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 264 LGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRG 323
+ KK L++EF + L +Y +S NG L+ V + +GL + H
Sbjct: 67 HDVLHSDKKLTLVFEFC-DQDLKKYF---DSCNGD--LDPEIVKSFLFQLLKGLGFCH-- 118
Query: 324 CNIRIVHLDIKPHNIRLDEDFCPKISDFGLAK 355
+ ++H D+KP N+ ++ + K+++FGLA+
Sbjct: 119 -SRNVLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 77/177 (43%), Gaps = 45/177 (25%)
Query: 248 EVASISRTSHVNIVPFLGFCYEKKKRA------LIYEFMPNGSLDQYI---YDHESSNGK 298
E+ + +H NI+ L +K ++ E M + +L Q I DHE +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMS-- 129
Query: 299 RTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTE 358
+YQ+ VGI ++LH I+H D+KP NI + D KI DFGLA+
Sbjct: 130 -----YLLYQMLVGI----KHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--- 174
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFG--------GVSHKSDVYSYGMMIHEMVIG 407
T GT+ + P V R++ G D++S G+++ EM+ G
Sbjct: 175 ----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 310 AVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT 369
A I EYLH ++ +++ D+KP N+ +D+ +++DFG AK+ + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 370 RGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
GT Y+APE+ G + D ++ G++I++M G
Sbjct: 200 -GTPEYLAPEIILSK--GYNKAVDWWALGVLIYQMAAG 234
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML-DTRG 371
I RGL+Y+H ++H D+KP N+ L+ KI DFGLA+ + L +
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 372 TAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
T Y APE+ G + D++S G ++ EM+ R
Sbjct: 190 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 310 AVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT 369
A IA L YLH ++ IV+ D+KP NI LD ++DFGL K+ + S S
Sbjct: 145 AAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTF-- 199
Query: 370 RGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
GT Y+APEV H D + G +++EM+ G
Sbjct: 200 CGTPEYLAPEVL--HKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 33/245 (13%)
Query: 211 LGQGGYADVYKGTLPDGRL---VAVKVMK-NLKDNGE---EFINEVASISRTSHVNIVPF 263
LG GG ++V+ D RL VAVKV++ +L + F E + + +H IV
Sbjct: 37 LGFGGMSEVHLAR--DLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 94
Query: 264 LGFCYEKKKRA----LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+ ++ E++ +L ++ KR +E + + L +
Sbjct: 95 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIE------VIADACQALNF 148
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ-TEKKESFISMLDTRGTAGYIAP 378
H+ I+H D+KP NI + K+ DFG+A+ + S GTA Y++P
Sbjct: 149 SHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 205
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMVIGRK--NADVKVSCSSEYF------PNAIYKQI 430
E V +SDVYS G +++E++ G D VS + ++ P+A ++ +
Sbjct: 206 E--QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL 263
Query: 431 ETEYD 435
+ D
Sbjct: 264 SADLD 268
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML-DTRG 371
I RGL+Y+H ++H D+KP N+ L+ KI DFGLA+ + L +
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 372 TAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
T Y APE+ G + D++S G ++ EM+ R
Sbjct: 190 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML-DTRG 371
I RGL+Y+H ++H D+KP N+ L+ KI DFGLA+ + L +
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 372 TAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
T Y APE+ G + D++S G ++ EM+ R
Sbjct: 194 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML-DTRG 371
I RGL+Y+H ++H D+KP N+ L+ KI DFGLA+ + L +
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 372 TAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
T Y APE+ G + D++S G ++ EM+ R
Sbjct: 194 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML-DTRG 371
I RGL+Y+H ++H D+KP N+ L+ KI DFGLA+ + L +
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 372 TAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
T Y APE+ G + D++S G ++ EM+ R
Sbjct: 194 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML-DTRG 371
I RGL+Y+H ++H D+KP N+ L+ KI DFGLA+ + L +
Sbjct: 138 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 372 TAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
T Y APE+ G + D++S G ++ EM+ R
Sbjct: 195 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNR 230
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML-DTRG 371
I RGL+Y+H ++H D+KP N+ L+ KI DFGLA+ + L +
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 372 TAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
T Y APE+ G + D++S G ++ EM+ R
Sbjct: 190 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 310 AVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT 369
A I EYLH ++ +++ D+KP N+ +D+ +++DFG AK+ + +
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----ATWTL 219
Query: 370 RGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
GT Y+APE+ G + D ++ G++I+EM G
Sbjct: 220 CGTPEYLAPEIILSK--GYNKAVDWWALGVLIYEMAAG 255
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML-DTRG 371
I RGL+Y+H ++H D+KP N+ L+ KI DFGLA+ + L +
Sbjct: 153 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 372 TAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
T Y APE+ G + D++S G ++ EM+ R
Sbjct: 210 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML-DTRG 371
I RGL+Y+H ++H D+KP N+ L+ KI DFGLA+ + L +
Sbjct: 135 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 372 TAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
T Y APE+ G + D++S G ++ EM+ R
Sbjct: 192 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML-DTRG 371
I RGL+Y+H ++H D+KP N+ L+ KI DFGLA+ + L +
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 372 TAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
T Y APE+ G + D++S G ++ EM+ R
Sbjct: 190 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML-DTRG 371
I RGL+Y+H ++H D+KP N+ L+ KI DFGLA+ + L +
Sbjct: 135 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 372 TAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
T Y APE+ G + D++S G ++ EM+ R
Sbjct: 192 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML-DTRG 371
I RGL+Y+H ++H D+KP N+ L+ KI DFGLA+ + L +
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 372 TAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
T Y APE+ G + D++S G ++ EM+ R
Sbjct: 194 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML-DTRG 371
I RGL+Y+H ++H D+KP N+ L+ KI DFGLA+ + L +
Sbjct: 138 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 372 TAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
T Y APE+ G + D++S G ++ EM+ R
Sbjct: 195 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML-DTRG 371
I RGL+Y+H ++H D+KP N+ L+ KI DFGLA+ + L +
Sbjct: 139 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 372 TAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
T Y APE+ G + D++S G ++ EM+ R
Sbjct: 196 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML-DTRG 371
I RGL+Y+H ++H D+KP N+ L+ KI DFGLA+ + L +
Sbjct: 130 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 372 TAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
T Y APE+ G + D++S G ++ EM+ R
Sbjct: 187 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML-DTRG 371
I RGL+Y+H ++H D+KP N+ L+ KI DFGLA+ + L +
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 372 TAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
T Y APE+ G + D++S G ++ EM+ R
Sbjct: 194 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML-DTRG 371
I RGL+Y+H ++H D+KP N+ L+ KI DFGLA+ + L +
Sbjct: 141 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 372 TAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
T Y APE+ G + D++S G ++ EM+ R
Sbjct: 198 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML-DTRG 371
I RGL+Y+H ++H D+KP N+ L+ KI DFGLA+ + L +
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 372 TAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
T Y APE+ G + D++S G ++ EM+ R
Sbjct: 190 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML-DTRG 371
I RGL+Y+H ++H D+KP N+ L+ KI DFGLA+ + L +
Sbjct: 131 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 372 TAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
T Y APE+ G + D++S G ++ EM+ R
Sbjct: 188 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML-DTRG 371
I RGL+Y+H ++H D+KP N+ L+ KI DFGLA+ + L +
Sbjct: 131 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 372 TAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
T Y APE+ G + D++S G ++ EM+ R
Sbjct: 188 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML-DTRG 371
I RGL+Y+H ++H D+KP N+ L+ KI DFGLA+ + L +
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 372 TAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
T Y APE+ G + D++S G ++ EM+ R
Sbjct: 194 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML-DTRG 371
I RGL+Y+H ++H D+KP N+ L+ KI DFGLA+ + L +
Sbjct: 135 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 372 TAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
T Y APE+ G + D++S G ++ EM+ R
Sbjct: 192 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 7/108 (6%)
Query: 304 RTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRL--DEDFCPKISDFGLAKQTEKKE 361
+ + I I L YLH N I H DIKP N ++ F K+ DFGL+K+ K
Sbjct: 168 KLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLN 224
Query: 362 S--FISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
+ + M GT ++APEV K D +S G+++H +++G
Sbjct: 225 NGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMG 272
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML-DTRG 371
I RGL+Y+H ++H D+KP N+ L+ KI DFGLA+ + L +
Sbjct: 153 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 372 TAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
T Y APE+ G + D++S G ++ EM+ R
Sbjct: 210 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISML-DTRG 371
I RGL+Y+H ++H D+KP N+ ++ KI DFGLA+ + + L +
Sbjct: 153 ILRGLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 372 TAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
T Y APE+ G + D++S G ++ EM+ R
Sbjct: 210 TRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 82/185 (44%), Gaps = 23/185 (12%)
Query: 229 LVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQY 288
LVAVK ++ + E+ + H NIV F A++ E+ G L +
Sbjct: 46 LVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFER 105
Query: 289 IYDHESSNGKR--TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP 346
I N R E R +Q + G+ Y H +++ H D+K N LD P
Sbjct: 106 I-----CNAGRFSEDEARFFFQQLIS---GVSYCH---AMQVCHRDLKLENTLLDGSPAP 154
Query: 347 --KISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCR--HFGGVSHKSDVYSYGMMIH 402
KI DFG +K + S T GT YIAPEV + + G V +DV+S G+ ++
Sbjct: 155 RLKICDFGYSKSSVLHSQPKS---TVGTPAYIAPEVLLKKEYDGKV---ADVWSCGVTLY 208
Query: 403 EMVIG 407
M++G
Sbjct: 209 VMLVG 213
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 310 AVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT 369
A I EYLH ++ +++ D+KP N+ +D+ +++DFG AK+ + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 370 RGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
GT Y+AP + G + D ++ G++I+EM G
Sbjct: 200 -GTPEYLAPAIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 95/228 (41%), Gaps = 44/228 (19%)
Query: 210 KLGQGGYADVYKGT-LPDGRLVAVK----VMKNLKDNGEEFINEVASISRTSHVNIVPFL 264
KLG+G Y V+K G +VAVK +N D F + + H NIV L
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 265 GFCYEKKKRA--LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
R L++++M D + LE + + + ++YLH
Sbjct: 76 NVLRADNDRDVYLVFDYMET--------DLHAVIRANILEPVHKQYVVYQLIKVIKYLHS 127
Query: 323 GCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ---------------TEKKESFIS-- 365
G ++H D+KP NI L+ + K++DFGL++ E E+F
Sbjct: 128 GG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ 184
Query: 366 --MLDTRGTAGYIAPEVFC---RHFGGVSHKSDVYSYGMMIHEMVIGR 408
+ D T Y APE+ ++ G+ D++S G ++ E++ G+
Sbjct: 185 PILTDYVATRWYRAPEILLGSTKYTKGI----DMWSLGCILGEILCGK 228
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 82/185 (44%), Gaps = 23/185 (12%)
Query: 229 LVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQY 288
LVAVK ++ + E E+ + H NIV F A++ E+ G L +
Sbjct: 46 LVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFER 105
Query: 289 IYDHESSNGKR--TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP 346
I N R E R +Q + G+ Y H +++ H D+K N LD P
Sbjct: 106 I-----CNAGRFSEDEARFFFQQLIS---GVSYCHA---MQVCHRDLKLENTLLDGSPAP 154
Query: 347 --KISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCR--HFGGVSHKSDVYSYGMMIH 402
KI FG +K + DT GT YIAPEV + + G V +DV+S G+ ++
Sbjct: 155 RLKICAFGYSKSSVLHS---QPKDTVGTPAYIAPEVLLKKEYDGKV---ADVWSCGVTLY 208
Query: 403 EMVIG 407
M++G
Sbjct: 209 VMLVG 213
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 50/214 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT 93
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K L+ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 94 PQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMS-------YLLYQMLXGI----KH 141
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + P
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-------------TAGTSFMMTPY 185
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMV 405
V R++ G D++S G ++ EMV
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 76/177 (42%), Gaps = 45/177 (25%)
Query: 248 EVASISRTSHVNIVPFLGFCYEKKKRA------LIYEFMPNGSLDQYI---YDHESSNGK 298
E+ + +H NI+ L +K ++ E M + +L Q I DHE +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMS-- 129
Query: 299 RTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTE 358
+YQ+ VGI ++LH I+H D+KP NI + D KI DFGLA+
Sbjct: 130 -----YLLYQMLVGI----KHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--- 174
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFG--------GVSHKSDVYSYGMMIHEMVIG 407
T GT+ + P V R++ G D++S G ++ EM+ G
Sbjct: 175 ----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 23/209 (11%)
Query: 211 LGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCYEK 270
+G+G Y +V++G+ G VAVK+ + + E+ + H NI+ F+
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 103
Query: 271 KKRA----LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH----- 321
+ + LI + GSL Y+ TL+ + +I + IA GL +LH
Sbjct: 104 RHSSTQLWLITHYHEMGSLYDYLQ-------LTTLDTVSCLRIVLSIASGLAHLHIEIFG 156
Query: 322 RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT--RGTAGYIAPE 379
I H D+K NI + ++ I+D GLA + + + + + GT Y+APE
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 216
Query: 380 VFCRHFGGVSHKS----DVYSYGMMIHEM 404
V S D++++G+++ E+
Sbjct: 217 VLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 105/229 (45%), Gaps = 34/229 (14%)
Query: 197 YSDVRRMTKSFSDKLGQGGYADVYKGTLPD----GRLVAVKVMKNLKDNG-----EEFIN 247
+ +R F++ LGQG + ++KG + G+L +V+ + D E F
Sbjct: 2 FHKIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFE 61
Query: 248 EVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVY 307
+ +S+ SH ++V G C+ + L+ EF+ GSLD Y+ +++ + W+
Sbjct: 62 AASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNC---INILWK--L 116
Query: 308 QIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRL--DED-------FCPKISDFGLAKQTE 358
++A +A + +L ++H ++ NI L +ED F K+SD G++
Sbjct: 117 EVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFI-KLSDPGISITVL 172
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
K+ +L R ++ PE + ++ +D +S+G + E+ G
Sbjct: 173 PKD----ILQER--IPWVPPECI-ENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 19/181 (10%)
Query: 231 AVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIY 290
AVK++ K + E I + + H NI+ + K ++ E G L I
Sbjct: 51 AVKIIDKSKRDPTEEIEIL--LRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKIL 108
Query: 291 DHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIR-LDEDFCP--- 346
++ R + I + +EYLH +VH D+KP NI +DE P
Sbjct: 109 R------QKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESI 159
Query: 347 KISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVI 406
+I DFG AKQ + + TA ++APEV R G D++S G++++ +
Sbjct: 160 RICDFGFAKQLRAENGLLXT--PCYTANFVAPEVLERQ--GYDAACDIWSLGVLLYTXLT 215
Query: 407 G 407
G
Sbjct: 216 G 216
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 124/275 (45%), Gaps = 46/275 (16%)
Query: 202 RMTKSFS--DKLGQGGYADVYKGT-LPDGRLVAVKVM--KNLKDNGEEFINEVASISRT- 255
R T+ + ++LG+G ++ V + + G+ A ++ K L + + A I R
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL 67
Query: 256 SHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIAR 315
H NIV E+ LI++ + G L + I E+ + + I +
Sbjct: 68 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIV---------AREYYSEADASHCIQQ 118
Query: 316 GLEYLHRGCNIRIVHLDIKPHNIRLDEDF---CPKISDFGLAKQTEKKESFISMLDTRGT 372
LE + + +VH ++KP N+ L K++DFGLA + E ++ + GT
Sbjct: 119 ILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ--AWFGFAGT 176
Query: 373 AGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFP------NAI 426
GY++PEV + G D+++ G++++ +++G Y P + +
Sbjct: 177 PGYLSPEVLRKDPYG--KPVDLWACGVILYILLVG-------------YPPFWDEDQHRL 221
Query: 427 YKQIET-EYDF---QLDGVVTEEEKEMAKKMILVS 457
Y+QI+ YDF + D VT E K++ KM+ ++
Sbjct: 222 YQQIKAGAYDFPSPEWD-TVTPEAKDLINKMLTIN 255
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 50/214 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT 93
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K L+ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 94 PQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMS-------YLLYQMLCGI----KH 141
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + P
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-------------TAGTSFMMTPY 185
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMV 405
V R++ G D++S G ++ EMV
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 23/209 (11%)
Query: 211 LGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCYEK 270
+G+G Y +V++G+ G VAVK+ + + E+ + H NI+ F+
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 74
Query: 271 KKRA----LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH----- 321
+ + LI + GSL Y+ TL+ + +I + IA GL +LH
Sbjct: 75 RHSSTQLWLITHYHEMGSLYDYL-------QLTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 322 RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT--RGTAGYIAPE 379
I H D+K NI + ++ I+D GLA + + + + + GT Y+APE
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 380 VFCRHFGGVSHKS----DVYSYGMMIHEM 404
V S D++++G+++ E+
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 23/209 (11%)
Query: 211 LGQGGYADVYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCYEK 270
+G+G Y +V++G+ G VAVK+ + + E+ + H NI+ F+
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 74
Query: 271 KKRA----LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH----- 321
+ + LI + GSL Y+ TL+ + +I + IA GL +LH
Sbjct: 75 RHSSTQLWLITHYHEMGSLYDYL-------QLTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 322 RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT--RGTAGYIAPE 379
I H D+K NI + ++ I+D GLA + + + + + GT Y+APE
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 380 VFCRHFGGVSHKS----DVYSYGMMIHEM 404
V S D++++G+++ E+
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 310 AVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDT 369
A I EYLH ++ +++ D+KP N+ +D+ +++DFG AK+ + + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---- 199
Query: 370 RGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
GT +APE+ G + D ++ G++I+EM G
Sbjct: 200 -GTPEALAPEIILSK--GYNKAVDWWALGVLIYEMAAG 234
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 88/216 (40%), Gaps = 50/216 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 36 AQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K ++ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 94 PQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMS-------YLLYQMLCGI----KH 141
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + PE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFMMTPE 185
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMVIG 407
V R++ G D++S G ++ EM+ G
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 85/202 (42%), Gaps = 25/202 (12%)
Query: 207 FSDKLGQGGYADVYKG----TLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVP 262
F ++G+G + VYKG T + ++ K K + F E + H NIV
Sbjct: 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVR 89
Query: 263 FLGFCYE-----KKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGL 317
F +E KK L+ E +G+L Y+ + K W I +GL
Sbjct: 90 FYD-SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSW------CRQILKGL 142
Query: 318 EYLHRGCNIRIVHLDIKPHNIRLD-EDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYI 376
++LH I+H D+K NI + KI D GLA T K+ SF + GT +
Sbjct: 143 QFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLA--TLKRASFAKAVI--GTPEFX 197
Query: 377 APEVFCRHFGGVSHKSDVYSYG 398
APE + + DVY++G
Sbjct: 198 APEXYEEKY---DESVDVYAFG 216
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 94/236 (39%), Gaps = 30/236 (12%)
Query: 258 VNIVPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARG 316
V IV Y +K LI E + G L I D G + R +I I
Sbjct: 72 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD----RGDQAFTEREASEIMKSIGEA 127
Query: 317 LEYLHRGCNIRIVHLDIKPHNIRLDE---DFCPKISDFGLAKQTEKKESFISMLDTRGTA 373
++YLH +I I H D+KP N+ + K++DFG AK+T S S+ + T
Sbjct: 128 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET---TSHNSLTEPCYTP 181
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG------------RKNADVKVSCSSEY 421
Y+APEV D++S G++++ ++ G ++
Sbjct: 182 YYVAPEVLGPE--KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 239
Query: 422 FPNAIYKQIETEYDFQLDGVV-TEEEKEMAKKMILVSLWCIQ-THPPDRPSMTKVV 475
FPN + ++ E + ++ TE + M + W +Q T P P T V
Sbjct: 240 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRV 295
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 92/236 (38%), Gaps = 30/236 (12%)
Query: 258 VNIVPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARG 316
V IV Y +K LI E + G L I D G + R +I I
Sbjct: 88 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD----RGDQAFTEREASEIMKSIGEA 143
Query: 317 LEYLHRGCNIRIVHLDIKPHNIRLDE---DFCPKISDFGLAKQTEKKESFISMLDTRGTA 373
++YLH +I I H D+KP N+ + K++DFG AK+T S + T
Sbjct: 144 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC---YTP 197
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG------------RKNADVKVSCSSEY 421
Y+APEV D++S G++++ ++ G ++
Sbjct: 198 YYVAPEVLGPE--KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 255
Query: 422 FPNAIYKQIETEYDFQLDGVV-TEEEKEMAKKMILVSLWCIQ-THPPDRPSMTKVV 475
FPN + ++ E + ++ TE + M + W +Q T P P T V
Sbjct: 256 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRV 311
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 82/185 (44%), Gaps = 23/185 (12%)
Query: 229 LVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQY 288
LVAVK ++ + E E+ + H NIV F A++ E+ G L +
Sbjct: 46 LVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFER 105
Query: 289 IYDHESSNGKR--TLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP 346
I N R E R +Q + G+ Y H +++ H D+K N LD P
Sbjct: 106 I-----CNAGRFSEDEARFFFQQLIS---GVSYCH---AMQVCHRDLKLENTLLDGSPAP 154
Query: 347 --KISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCR--HFGGVSHKSDVYSYGMMIH 402
KI FG +K + S T GT YIAPEV + + G V +DV+S G+ ++
Sbjct: 155 RLKICAFGYSKSSVLHSQPKS---TVGTPAYIAPEVLLKKEYDGKV---ADVWSCGVTLY 208
Query: 403 EMVIG 407
M++G
Sbjct: 209 VMLVG 213
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVK-VMKNLKDNGEEFINEVASISRTS-HVNIVPFLGFC 267
L +GG+A VY+ + GR A+K ++ N ++ I EV + + S H NIV F
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 268 YEKKKRA-------LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
K+ + L+ + G L +++ ES + L TV +I R ++++
Sbjct: 96 SIGKEESDTGQAEFLLLTELCKGQLVEFLKKMES---RGPLSCDTVLKIFYQTCRAVQHM 152
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ---------TEKKESFISMLDTRG 371
HR I+H D+K N+ L K+ DFG A + ++ + + TR
Sbjct: 153 HRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRN 211
Query: 372 TAG-YIAPEVFCRHFG-GVSHKSDVYSYGMMIH 402
T Y PE+ + + K D+++ G +++
Sbjct: 212 TTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY 244
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 50/214 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 93
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K L+ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 94 PQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMS-------YLLYQMLXGI----KH 141
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + P
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-------------TAGTSFMMTPY 185
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMV 405
V R++ G D++S G ++ EMV
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 31/210 (14%)
Query: 211 LGQGGYADVY----KGTLPDGRLVAVKVMKN----LKDNGEEFINEVASISRTSHVNIVP 262
LG+G + V KGT L AVK++K D+ E + E ++ +
Sbjct: 349 LGKGSFGKVMLSERKGT---DELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLT 405
Query: 263 FLGFCYEKKKRA-LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
L C++ R + E++ G L +I R E V+ A IA GL +L
Sbjct: 406 QLHSCFQTMDRLYFVMEYVNGGDLMYHI-----QQVGRFKEPHAVF-YAAEIAIGLFFLQ 459
Query: 322 RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR---GTAGYIAP 378
+ I++ D+K N+ LD + KI+DFG+ KE+ + T+ GT YIAP
Sbjct: 460 ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMC-----KENIWDGVTTKXFCGTPDYIAP 511
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ G S D +++G++++EM+ G+
Sbjct: 512 EIIAYQPYGKS--VDWWAFGVLLYEMLAGQ 539
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 92/236 (38%), Gaps = 30/236 (12%)
Query: 258 VNIVPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARG 316
V IV Y +K LI E + G L I D G + R +I I
Sbjct: 80 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD----RGDQAFTEREASEIMKSIGEA 135
Query: 317 LEYLHRGCNIRIVHLDIKPHNIRLDE---DFCPKISDFGLAKQTEKKESFISMLDTRGTA 373
++YLH +I I H D+KP N+ + K++DFG AK+T S + T
Sbjct: 136 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC---YTP 189
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG------------RKNADVKVSCSSEY 421
Y+APEV D++S G++++ ++ G ++
Sbjct: 190 YYVAPEVLGPE--KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 247
Query: 422 FPNAIYKQIETEYDFQLDGVV-TEEEKEMAKKMILVSLWCIQ-THPPDRPSMTKVV 475
FPN + ++ E + ++ TE + M + W +Q T P P T V
Sbjct: 248 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRV 303
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 50/214 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 29 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 86
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K L+ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 87 PQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMS-------YLLYQMLXGI----KH 134
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + P
Sbjct: 135 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-------------TAGTSFMMTPY 178
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMV 405
V R++ G D++S G ++ EMV
Sbjct: 179 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 38/216 (17%)
Query: 210 KLGQGGYADVYKGT-LPDGRLVAVKVMKNLKDNGEE-----FINEVASISRTSHVNIVPF 263
K+GQG + +V+K G+ VA+K K L +N +E + E+ + H N+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALK--KVLMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 264 LGFC------YEKKKRA--LIYEFMPN---GSLDQYIYDHESSNGKRTLEWRTVYQIAVG 312
+ C Y + K + L+++F + G L + S KR ++
Sbjct: 83 IEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM--------- 133
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ-TEKKESFISMLDTR- 370
+ GL Y+HR +I+H D+K N+ + D K++DFGLA+ + K S + R
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 371 GTAGYIAPEVFC--RHFGGVSHKSDVYSYGMMIHEM 404
T Y PE+ R +G D++ G ++ EM
Sbjct: 191 VTLWYRPPELLLGERDYGP---PIDLWGAGCIMAEM 223
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 15/163 (9%)
Query: 247 NEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTV 306
NE++ +++ H ++ +K + LI EF+ G L +D ++ + E +
Sbjct: 97 NEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL----FDRIAAEDYKMSEAEVI 152
Query: 307 YQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP--KISDFGLAKQTEKKESFI 364
+ GL+++H IVHLDIKP NI + KI DFGLA + E +
Sbjct: 153 NYMRQA-CEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE-IV 207
Query: 365 SMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
+ T TA + APE+ R V +D+++ G++ + ++ G
Sbjct: 208 KV--TTATAEFAAPEIVDRE--PVGFYTDMWAIGVLGYVLLSG 246
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 50/214 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT 93
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K L+ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 94 PQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMS-------YLLYQMLCGI----KH 141
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + P
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-------------TAGTSFMMTPY 185
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMV 405
V R++ G D++S G ++ EMV
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 32/234 (13%)
Query: 192 PKRFSYSDVRRMTKSFSDK--LGQGGYADVYKGT-LPDGRLVAVKVMKNLKDN--GEEFI 246
PKR Y+ ++ F K LG+G Y V T P G +VA+K ++ +
Sbjct: 2 PKRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 247 NEVASISRTSHVNIVPFLGF----CYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE 302
E+ + H NI+ +E I + + L + I S+ ++
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDH--IQ 115
Query: 303 WRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKES 362
+ +YQ R ++ LH G N+ +H D+KP N+ ++ + K+ DFGLA+ ++ +
Sbjct: 116 Y-FIYQTL----RAVKVLH-GSNV--IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
Query: 363 FIS--------MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
S M++ T Y APEV S DV+S G ++ E+ + R
Sbjct: 168 DNSEPTGQQSGMVEFVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAELFLRR 220
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 92/236 (38%), Gaps = 30/236 (12%)
Query: 258 VNIVPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARG 316
V IV Y +K LI E + G L I D G + R +I I
Sbjct: 78 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD----RGDQAFTEREASEIMKSIGEA 133
Query: 317 LEYLHRGCNIRIVHLDIKPHNIRLDE---DFCPKISDFGLAKQTEKKESFISMLDTRGTA 373
++YLH +I I H D+KP N+ + K++DFG AK+T S + T
Sbjct: 134 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC---YTP 187
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG------------RKNADVKVSCSSEY 421
Y+APEV D++S G++++ ++ G ++
Sbjct: 188 YYVAPEVLGPE--KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 245
Query: 422 FPNAIYKQIETEYDFQLDGVV-TEEEKEMAKKMILVSLWCIQ-THPPDRPSMTKVV 475
FPN + ++ E + ++ TE + M + W +Q T P P T V
Sbjct: 246 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRV 301
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 118/266 (44%), Gaps = 44/266 (16%)
Query: 209 DKLGQGGYADVYKGT-LPDGRLVAVKVM--KNLKDNGEEFINEVASISRT-SHVNIVPFL 264
+ +G+G ++ V + L G A K++ K L + + A I R H NIV
Sbjct: 10 EDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLH 69
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
E+ L+++ + G L + I E+ + + I + LE +
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIV---------AREYYSEADASHCIQQILEAVLHCH 120
Query: 325 NIRIVHLDIKPHNIRLD---EDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF 381
+ +VH D+KP N+ L + K++DFGLA + + + + GT GY++PEV
Sbjct: 121 QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQ--AWFGFAGTPGYLSPEVL 178
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFP------NAIYKQIET-EY 434
+ G D+++ G++++ +++G Y P + +Y+QI+ Y
Sbjct: 179 RKEAYG--KPVDIWACGVILYILLVG-------------YPPFWDEDQHKLYQQIKAGAY 223
Query: 435 DF---QLDGVVTEEEKEMAKKMILVS 457
DF + D VT E K + +M+ ++
Sbjct: 224 DFPSPEWD-TVTPEAKNLINQMLTIN 248
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 28/208 (13%)
Query: 211 LGQGGYADVYKGTLPD-GRLVAVKVMKNLKDNGEEFIN---------EVASISRTSHVNI 260
LG G + V+ + + V VK +K K + +I E+A +SR H NI
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQI--AVGIARGLE 318
+ L + L+ E +G LD + + L Q+ AVG R +
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKD 150
Query: 319 YLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAP 378
+HR DIK NI + EDF K+ DFG A E+ + F + GT Y AP
Sbjct: 151 IIHR---------DIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFC---GTIEYCAP 198
Query: 379 EVFCRH-FGGVSHKSDVYSYGMMIHEMV 405
EV + + G + +++S G+ ++ +V
Sbjct: 199 EVLMGNPYRG--PELEMWSLGVTLYTLV 224
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 38/216 (17%)
Query: 210 KLGQGGYADVYKGT-LPDGRLVAVKVMKNLKDNGEE-----FINEVASISRTSHVNIVPF 263
K+GQG + +V+K G+ VA+K K L +N +E + E+ + H N+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALK--KVLMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 264 LGFC------YEKKKRA--LIYEFMPN---GSLDQYIYDHESSNGKRTLEWRTVYQIAVG 312
+ C Y + K + L+++F + G L + S KR ++
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM--------- 133
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ-TEKKESFISMLDTR- 370
+ GL Y+HR +I+H D+K N+ + D K++DFGLA+ + K S + R
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 371 GTAGYIAPEVFC--RHFGGVSHKSDVYSYGMMIHEM 404
T Y PE+ R +G D++ G ++ EM
Sbjct: 191 VTLWYRPPELLLGERDYGP---PIDLWGAGCIMAEM 223
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 92/236 (38%), Gaps = 30/236 (12%)
Query: 258 VNIVPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARG 316
V IV Y +K LI E + G L I D G + R +I I
Sbjct: 79 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD----RGDQAFTEREASEIMKSIGEA 134
Query: 317 LEYLHRGCNIRIVHLDIKPHNIRLDE---DFCPKISDFGLAKQTEKKESFISMLDTRGTA 373
++YLH +I I H D+KP N+ + K++DFG AK+T S + T
Sbjct: 135 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC---YTP 188
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG------------RKNADVKVSCSSEY 421
Y+APEV D++S G++++ ++ G ++
Sbjct: 189 YYVAPEVLGPE--KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 246
Query: 422 FPNAIYKQIETEYDFQLDGVV-TEEEKEMAKKMILVSLWCIQ-THPPDRPSMTKVV 475
FPN + ++ E + ++ TE + M + W +Q T P P T V
Sbjct: 247 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRV 302
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 104/229 (45%), Gaps = 34/229 (14%)
Query: 197 YSDVRRMTKSFSDKLGQGGYADVYKGTLPD----GRLVAVKVMKNLKDNG-----EEFIN 247
+ +R F++ LGQG + ++KG + G+L +V+ + D E F
Sbjct: 2 FHKIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFE 61
Query: 248 EVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVY 307
+ +S+ SH ++V G C + L+ EF+ GSLD Y+ +++ + W+
Sbjct: 62 AASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNC---INILWK--L 116
Query: 308 QIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRL--DED-------FCPKISDFGLAKQTE 358
++A +A + +L ++H ++ NI L +ED F K+SD G++
Sbjct: 117 EVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFI-KLSDPGISITVL 172
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
K+ +L R ++ PE + ++ +D +S+G + E+ G
Sbjct: 173 PKD----ILQER--IPWVPPECI-ENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 92/236 (38%), Gaps = 30/236 (12%)
Query: 258 VNIVPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARG 316
V IV Y +K LI E + G L I D G + R +I I
Sbjct: 73 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD----RGDQAFTEREASEIMKSIGEA 128
Query: 317 LEYLHRGCNIRIVHLDIKPHNIRLDE---DFCPKISDFGLAKQTEKKESFISMLDTRGTA 373
++YLH +I I H D+KP N+ + K++DFG AK+T S + T
Sbjct: 129 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC---YTP 182
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG------------RKNADVKVSCSSEY 421
Y+APEV D++S G++++ ++ G ++
Sbjct: 183 YYVAPEVLGPE--KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 240
Query: 422 FPNAIYKQIETEYDFQLDGVV-TEEEKEMAKKMILVSLWCIQ-THPPDRPSMTKVV 475
FPN + ++ E + ++ TE + M + W +Q T P P T V
Sbjct: 241 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRV 296
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 31/210 (14%)
Query: 211 LGQGGYADVY----KGTLPDGRLVAVKVMKN----LKDNGEEFINEVASISRTSHVNIVP 262
LG+G + V KGT L AVK++K D+ E + E ++ +
Sbjct: 28 LGKGSFGKVMLSERKGT---DELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLT 84
Query: 263 FLGFCYEKKKRA-LIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLH 321
L C++ R + E++ G L +I R E V+ A IA GL +L
Sbjct: 85 QLHSCFQTMDRLYFVMEYVNGGDLMYHI-----QQVGRFKEPHAVF-YAAEIAIGLFFLQ 138
Query: 322 RGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTR---GTAGYIAP 378
+ I++ D+K N+ LD + KI+DFG+ KE+ + T+ GT YIAP
Sbjct: 139 ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMC-----KENIWDGVTTKXFCGTPDYIAP 190
Query: 379 EVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
E+ G S D +++G++++EM+ G+
Sbjct: 191 EIIAYQPYGKS--VDWWAFGVLLYEMLAGQ 218
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 92/236 (38%), Gaps = 30/236 (12%)
Query: 258 VNIVPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARG 316
V IV Y +K LI E + G L I D G + R +I I
Sbjct: 124 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD----RGDQAFTEREASEIMKSIGEA 179
Query: 317 LEYLHRGCNIRIVHLDIKPHNIRLDE---DFCPKISDFGLAKQTEKKESFISMLDTRGTA 373
++YLH +I I H D+KP N+ + K++DFG AK+T S + T
Sbjct: 180 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC---YTP 233
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG------------RKNADVKVSCSSEY 421
Y+APEV D++S G++++ ++ G ++
Sbjct: 234 YYVAPEVLGPE--KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 291
Query: 422 FPNAIYKQIETEYDFQLDGVV-TEEEKEMAKKMILVSLWCIQ-THPPDRPSMTKVV 475
FPN + ++ E + ++ TE + M + W +Q T P P T V
Sbjct: 292 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRV 347
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 92/236 (38%), Gaps = 30/236 (12%)
Query: 258 VNIVPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARG 316
V IV Y +K LI E + G L I D G + R +I I
Sbjct: 72 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD----RGDQAFTEREASEIMKSIGEA 127
Query: 317 LEYLHRGCNIRIVHLDIKPHNIRLDE---DFCPKISDFGLAKQTEKKESFISMLDTRGTA 373
++YLH +I I H D+KP N+ + K++DFG AK+T S + T
Sbjct: 128 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC---YTP 181
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG------------RKNADVKVSCSSEY 421
Y+APEV D++S G++++ ++ G ++
Sbjct: 182 YYVAPEVLGPE--KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 239
Query: 422 FPNAIYKQIETEYDFQLDGVV-TEEEKEMAKKMILVSLWCIQ-THPPDRPSMTKVV 475
FPN + ++ E + ++ TE + M + W +Q T P P T V
Sbjct: 240 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRV 295
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 209 DKLGQGGYADVYKGT-LPDGRLVAVKVMKNLKDNGEEF--INEVASISRT-SHVNIVPFL 264
++LG+G ++ V + G A K++ K + +F + A I R H NIV
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
E+ L+++ + G L + I E + + QI IA Y H
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS--HCIQQILESIA----YCHSN- 124
Query: 325 NIRIVHLDIKPHNIRLD---EDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF 381
IVH ++KP N+ L + K++DFGLA + E++ GT GY++PEV
Sbjct: 125 --GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF---AGTPGYLSPEVL 179
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIG 407
+ S D+++ G++++ +++G
Sbjct: 180 KK--DPYSKPVDIWACGVILYILLVG 203
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 209 DKLGQGGYADVYKGT-LPDGRLVAVKVMKNLKDNGEEF--INEVASISRT-SHVNIVPFL 264
++LG+G ++ V + G A K++ K + +F + A I R H NIV
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
E+ L+++ + G L + I E + + QI IA Y H
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS--HCIQQILESIA----YCHSN- 124
Query: 325 NIRIVHLDIKPHNIRLD---EDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF 381
IVH ++KP N+ L + K++DFGLA + E++ GT GY++PEV
Sbjct: 125 --GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA---GTPGYLSPEVL 179
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIG 407
+ S D+++ G++++ +++G
Sbjct: 180 KK--DPYSKPVDIWACGVILYILLVG 203
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 92/236 (38%), Gaps = 30/236 (12%)
Query: 258 VNIVPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARG 316
V IV Y +K LI E + G L I D G + R +I I
Sbjct: 118 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR----GDQAFTEREASEIMKSIGEA 173
Query: 317 LEYLHRGCNIRIVHLDIKPHNIRLDE---DFCPKISDFGLAKQTEKKESFISMLDTRGTA 373
++YLH +I I H D+KP N+ + K++DFG AK+T S + T
Sbjct: 174 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC---YTP 227
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG------------RKNADVKVSCSSEY 421
Y+APEV D++S G++++ ++ G ++
Sbjct: 228 YYVAPEVLGPE--KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 285
Query: 422 FPNAIYKQIETEYDFQLDGVV-TEEEKEMAKKMILVSLWCIQ-THPPDRPSMTKVV 475
FPN + ++ E + ++ TE + M + W +Q T P P T V
Sbjct: 286 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRV 341
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 31/163 (19%)
Query: 210 KLGQGGYADVYKGT-LPDGRLVAVKVMKNLKDNGEE-----FINEVASISRTSHVNIVPF 263
K+GQG + +V+K G+ VA+K K L +N +E + E+ + H N+V
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALK--KVLMENEKEGFPITALREIKILQLLKHENVVNL 81
Query: 264 LGFC------YEKKKRA--LIYEFMPN---GSLDQYIYDHESSNGKRTLEWRTVYQIAVG 312
+ C Y + K + L+++F + G L + S KR ++
Sbjct: 82 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM--------- 132
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAK 355
+ GL Y+HR +I+H D+K N+ + D K++DFGLA+
Sbjct: 133 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 100/234 (42%), Gaps = 32/234 (13%)
Query: 192 PKRFSYSDVRRMTKSFSDK--LGQGGYADVYKGT-LPDGRLVAVKVMKNLKDN--GEEFI 246
PKR Y+ ++ F K LG+G Y V T P G +VA+K ++ +
Sbjct: 2 PKRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 247 NEVASISRTSHVNIVPFLGF----CYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE 302
E+ + H NI+ +E I + + L + I S+ ++
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDH--IQ 115
Query: 303 WRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKES 362
+ +YQ R ++ LH G N+ +H D+KP N+ ++ + K+ DFGLA+ ++ +
Sbjct: 116 Y-FIYQTL----RAVKVLH-GSNV--IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
Query: 363 FIS--------MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
S M + T Y APEV S DV+S G ++ E+ + R
Sbjct: 168 DNSEPTGQQSGMTEXVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAELFLRR 220
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 92/236 (38%), Gaps = 30/236 (12%)
Query: 258 VNIVPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARG 316
V IV Y +K LI E + G L I D G + R +I I
Sbjct: 74 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD----RGDQAFTEREASEIMKSIGEA 129
Query: 317 LEYLHRGCNIRIVHLDIKPHNIRLDE---DFCPKISDFGLAKQTEKKESFISMLDTRGTA 373
++YLH +I I H D+KP N+ + K++DFG AK+T S + T
Sbjct: 130 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC---YTP 183
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG------------RKNADVKVSCSSEY 421
Y+APEV D++S G++++ ++ G ++
Sbjct: 184 YYVAPEVLGPE--KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 241
Query: 422 FPNAIYKQIETEYDFQLDGVV-TEEEKEMAKKMILVSLWCIQ-THPPDRPSMTKVV 475
FPN + ++ E + ++ TE + M + W +Q T P P T V
Sbjct: 242 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRV 297
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 209 DKLGQGGYADVYKGT-LPDGRLVAVKVMKNLKDNGEEF--INEVASISRT-SHVNIVPFL 264
++LG+G ++ V + G A K++ K + +F + A I R H NIV
Sbjct: 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 94
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
E+ L+++ + G L + I E + + QI IA Y H
Sbjct: 95 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH--CIQQILESIA----YCHSNG 148
Query: 325 NIRIVHLDIKPHNIRLD---EDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF 381
IVH ++KP N+ L + K++DFGLA + E++ GT GY++PEV
Sbjct: 149 ---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA---GTPGYLSPEVL 202
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIG 407
+ S D+++ G++++ +++G
Sbjct: 203 KK--DPYSKPVDIWACGVILYILLVG 226
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 209 DKLGQGGYADVYKGT-LPDGRLVAVKVMKNLKDNGEEF--INEVASISRT-SHVNIVPFL 264
++LG+G ++ V + G A K++ K + +F + A I R H NIV
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 70
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
E+ L+++ + G L + I E + + QI IA Y H
Sbjct: 71 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADAS--HCIQQILESIA----YCHSN- 123
Query: 325 NIRIVHLDIKPHNIRLD---EDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF 381
IVH ++KP N+ L + K++DFGLA + E++ GT GY++PEV
Sbjct: 124 --GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA---GTPGYLSPEVL 178
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIG 407
+ S D+++ G++++ +++G
Sbjct: 179 KK--DPYSKPVDIWACGVILYILLVG 202
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 92/236 (38%), Gaps = 30/236 (12%)
Query: 258 VNIVPFLGFCYEKKKRALI-YEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARG 316
V IV Y +K LI E + G L I D G + R +I I
Sbjct: 74 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQD----RGDQAFTEREASEIMKSIGEA 129
Query: 317 LEYLHRGCNIRIVHLDIKPHNIRLDE---DFCPKISDFGLAKQTEKKESFISMLDTRGTA 373
++YLH +I I H D+KP N+ + K++DFG AK+T S + T
Sbjct: 130 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC---YTP 183
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG------------RKNADVKVSCSSEY 421
Y+APEV D++S G++++ ++ G ++
Sbjct: 184 YYVAPEVLGPE--KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 241
Query: 422 FPNAIYKQIETEYDFQLDGVV-TEEEKEMAKKMILVSLWCIQ-THPPDRPSMTKVV 475
FPN + ++ E + ++ TE + M + W +Q T P P T V
Sbjct: 242 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRV 297
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 38/216 (17%)
Query: 210 KLGQGGYADVYKGT-LPDGRLVAVKVMKNLKDNGEE-----FINEVASISRTSHVNIVPF 263
K+GQG + +V+K G+ VA+K K L +N +E + E+ + H N+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALK--KVLMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 264 LGFC------YEKKKRA--LIYEFMPN---GSLDQYIYDHESSNGKRTLEWRTVYQIAVG 312
+ C Y + K + L+++F + G L + S KR ++
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM--------- 133
Query: 313 IARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQ-TEKKESFISMLDTR- 370
+ GL Y+HR +I+H D+K N+ + D K++DFGLA+ + K S + R
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 371 GTAGYIAPEVFC--RHFGGVSHKSDVYSYGMMIHEM 404
T Y PE+ R +G D++ G ++ EM
Sbjct: 191 VTLWYRPPELLLGERDYGP---PIDLWGAGCIMAEM 223
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 97/227 (42%), Gaps = 29/227 (12%)
Query: 190 LAPKRFSY-SDVRRMTKSFSDKLGQGGYADVYKGTLPD---GRLVAVKVMKNLKDNGEEF 245
L P + Y +V MT +LG+G + +V++ + D G AVK ++ E F
Sbjct: 60 LKPVDYEYREEVHWMT--HQPRLGRGSFGEVHR--MKDKQTGFQCAVKKVRL-----EVF 110
Query: 246 -INEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWR 304
+ E+ + + S IVP G E + E + GSL Q I E R
Sbjct: 111 RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC-----LPEDR 165
Query: 305 TVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFC-PKISDFGLAKQTEKKESF 363
+Y + + GLEYLH RI+H D+K N+ L D + DFG A +
Sbjct: 166 ALYYLGQAL-EGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 221
Query: 364 ISMLD---TRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
S+L GT ++APEV K D++S M+ M+ G
Sbjct: 222 KSLLTGDYIPGTETHMAPEVVMGK--PCDAKVDIWSSCCMMLHMLNG 266
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 26/225 (11%)
Query: 197 YSDVRRMTKSFSDKLGQGGYADVYKG-TLPDGRLVAVKVMKNLKDN-GEEFINEVASISR 254
+ DV ++ + D LG+G +A V L + AVK+++ + EV + +
Sbjct: 10 FEDVYQLQE---DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQ 66
Query: 255 TS-HVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGI 313
H N++ + F E+ + L++E M GS+ +I+ N LE V Q +
Sbjct: 67 CQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFN---ELEASVVVQ---DV 120
Query: 314 ARGLEYLHRGCNIRIVHLDIKPHNIRLDE--DFCP-KISDFGLAKQTE-----KKESFIS 365
A L++LH N I H D+KP NI + P KI DFGL + S
Sbjct: 121 ASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPE 177
Query: 366 MLDTRGTAGYIAPEV---FCRHFGGVSHKSDVYSYGMMIHEMVIG 407
+L G+A Y+APEV F + D++S G++++ ++ G
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 24/205 (11%)
Query: 210 KLGQGGYADVYKGTLPD---GRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGF 266
+LG+G + +V++ + D G AVK ++ EE + + + + IVP G
Sbjct: 100 RLGRGSFGEVHR--MEDKQTGFQCAVKKVRLEVFRAEELM----ACAGLTSPRIVPLYGA 153
Query: 267 CYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNI 326
E + E + GSL Q + + E R +Y + + GLEYLH +
Sbjct: 154 VREGPWVNIFMELLEGGSLGQLVKEQGC-----LPEDRALYYLGQAL-EGLEYLH---SR 204
Query: 327 RIVHLDIKPHNIRLDEDFC-PKISDFGLAKQTEKKESFISMLD---TRGTAGYIAPEVFC 382
RI+H D+K N+ L D + DFG A + S+L GT ++APEV
Sbjct: 205 RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVL 264
Query: 383 RHFGGVSHKSDVYSYGMMIHEMVIG 407
K DV+S M+ M+ G
Sbjct: 265 GR--SCDAKVDVWSSCCMMLHMLNG 287
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 87/214 (40%), Gaps = 50/214 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 36 AQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K ++ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 94 PQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMS-------YLLYQMLCGI----KH 141
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + PE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFMMEPE 185
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMV 405
V R++ G D++S G ++ EMV
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 87/216 (40%), Gaps = 50/216 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 36 AQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFT 93
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K ++ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 94 PQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMS-------YLLYQMLCGI----KH 141
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + P
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-------------TAGTSFMMTPY 185
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMVIG 407
V R++ G D++S G ++ EM+ G
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 100/234 (42%), Gaps = 32/234 (13%)
Query: 192 PKRFSYSDVRRMTKSFSDK--LGQGGYADVYKGT-LPDGRLVAVKVMKNLKDN--GEEFI 246
PKR Y+ ++ F K LG+G Y V T P G +VA+K ++ +
Sbjct: 2 PKRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL 57
Query: 247 NEVASISRTSHVNIVPFLGF----CYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLE 302
E+ + H NI+ +E I + + L + I S+ ++
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDH--IQ 115
Query: 303 WRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKES 362
+ +YQ R ++ LH G N+ +H D+KP N+ ++ + K+ DFGLA+ ++ +
Sbjct: 116 Y-FIYQTL----RAVKVLH-GSNV--IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
Query: 363 FIS--------MLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIGR 408
S M + T Y APEV S DV+S G ++ E+ + R
Sbjct: 168 DNSEPTGQQSGMTEYVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAELFLRR 220
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 50/214 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 74 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 131
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K L+ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 132 PQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMS-------YLLYQMLCGI----KH 179
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + P
Sbjct: 180 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFMMTPY 223
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMV 405
V R++ G D++S G ++ EMV
Sbjct: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 50/214 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 37 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 94
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K L+ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 95 PQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMS-------YLLYQMLCGI----KH 142
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + P
Sbjct: 143 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFMMTPY 186
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMV 405
V R++ G D++S G ++ EMV
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 50/214 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 93
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K L+ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 94 PQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMS-------YLLYQMLCGI----KH 141
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + P
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFMMTPY 185
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMV 405
V R++ G D++S G ++ EMV
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 50/214 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 35 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 92
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K L+ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 93 PQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMS-------YLLYQMLCGI----KH 140
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + P
Sbjct: 141 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFMMTPY 184
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMV 405
V R++ G D++S G ++ EMV
Sbjct: 185 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 50/214 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 93
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K L+ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 94 PQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMS-------YLLYQMLCGI----KH 141
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + P
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFMMTPY 185
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMV 405
V R++ G D++S G ++ EMV
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 86/208 (41%), Gaps = 34/208 (16%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 38 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 95
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K ++ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 96 PQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMS-------YLLYQMLCGI----KH 143
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ + + TR Y APE
Sbjct: 144 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTR---YYRAPE 197
Query: 380 VFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
V G D++S G ++ EM+ G
Sbjct: 198 VILGM--GYKENVDIWSVGCIMGEMIKG 223
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 50/214 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 37 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 94
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K L+ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 95 PQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMS-------YLLYQMLCGI----KH 142
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + P
Sbjct: 143 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFMMTPY 186
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMV 405
V R++ G D++S G ++ EMV
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 50/214 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 30 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 87
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K L+ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 88 PQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMS-------YLLYQMLCGI----KH 135
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + P
Sbjct: 136 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFMMTPY 179
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMV 405
V R++ G D++S G ++ EMV
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 74/169 (43%), Gaps = 29/169 (17%)
Query: 248 EVASISRTSHVNIVPFLGFCYEKKKRA------LIYEFMPNGSLDQYIY---DHESSNGK 298
E+ + +H NI+ L +K L+ E M + +L Q I+ DHE +
Sbjct: 71 ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMS-- 127
Query: 299 RTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTE 358
+YQ+ GI ++LH I+H D+KP NI + D KI DFGLA+
Sbjct: 128 -----YLLYQMLCGI----KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAS 175
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
+ TR Y APEV G D++S G ++ E+V G
Sbjct: 176 TNFMMTPYVVTR---YYRAPEVILGM--GYKENVDIWSVGCIMGELVKG 219
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 50/214 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 30 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 87
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K L+ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 88 PQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMS-------YLLYQMLCGI----KH 135
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + P
Sbjct: 136 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFMMTPY 179
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMV 405
V R++ G D++S G ++ EMV
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 50/214 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 29 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 86
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K L+ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 87 PQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMS-------YLLYQMLCGI----KH 134
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + P
Sbjct: 135 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFMMTPY 178
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMV 405
V R++ G D++S G ++ EMV
Sbjct: 179 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 29/241 (12%)
Query: 210 KLGQGGYADVYKG-TLPDGRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCY 268
KLG+G Y++V++ + + V VK++K +K N + ++ R NI+
Sbjct: 44 KLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGG-PNIITLADIVK 102
Query: 269 EKKKR--ALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNI 326
+ R AL++E + N Q +Y +TL + I + L+Y H ++
Sbjct: 103 DPVSRTPALVFEHVNNTDFKQ-LY--------QTLTDYDIRFYMYEILKALDYCH---SM 150
Query: 327 RIVHLDIKPHNIRLDEDFCP-KISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHF 385
I+H D+KPHN+ +D + ++ D+GLA+ + + + +R G PE+ +
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLV-DY 206
Query: 386 GGVSHKSDVYSYGMMIHEMVI-------GRKNADVKVSCSSEYFPNAIYKQIETEYDFQL 438
+ D++S G M+ M+ G N D V + +Y I+ +Y+ +L
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID-KYNIEL 265
Query: 439 D 439
D
Sbjct: 266 D 266
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 87/214 (40%), Gaps = 50/214 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 36 AQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K ++ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 94 PQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMS-------YLLYQMLCGI----KH 141
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + PE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFMMEPE 185
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMV 405
V R++ G D++S G ++ EMV
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 219
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 50/214 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 74 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 131
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K L+ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 132 PQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMS-------YLLYQMLCGI----KH 179
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + P
Sbjct: 180 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFMMTPY 223
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMV 405
V R++ G D++S G ++ EMV
Sbjct: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 87/216 (40%), Gaps = 50/216 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K ++ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 94 PQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMS-------YLLYQMLCGI----KH 141
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + P
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-------------TAGTSFMMTPY 185
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMVIG 407
V R++ G D++S G ++ EM+ G
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 37/225 (16%)
Query: 192 PKRFSYSDVRRMTKSFSDKLGQGGYADVYK-GTLPDGRLVAVK----VMKNLKDNGEEFI 246
P+ F +R+++ LG G Y +V+K + DGRL AVK + KD + +
Sbjct: 51 PESFFQQSFQRLSR-----LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARK-L 104
Query: 247 NEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTV 306
EV S + L +E+ + + SL Q+ +S + + W +
Sbjct: 105 AEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQV-WGYL 163
Query: 307 YQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGL------AKQTEKK 360
+ +A +LH + +VHLD+KP NI L K+ DFGL A E +
Sbjct: 164 RDTLLALA----HLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ 216
Query: 361 ESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMV 405
E G Y+APE+ +G +DV+S G+ I E+
Sbjct: 217 E---------GDPRYMAPELLQGSYGTA---ADVFSLGLTILEVA 249
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 93/236 (39%), Gaps = 42/236 (17%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYK--GTLPDGRLVAVKVMKNLKDNGEEFINEVASISR-- 254
DV D LG+G + V + GR VAVK++KN+ E +E+ +
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN 69
Query: 255 ----TSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIA 310
S V L + +++E + + YD NG + ++A
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLST-----YDFIKENGFLPFRLDHIRKMA 124
Query: 311 VGIARGLEYLHRGCNIRIVHLDIKPHNIRL-----DEDFCPKIS--------------DF 351
I + + +LH ++ H D+KP NI E + PKI DF
Sbjct: 125 YQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDF 181
Query: 352 GLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
G A ++ S +++ TR Y APEV G S DV+S G ++ E +G
Sbjct: 182 GSATYDDEHHS--TLVSTR---HYRAPEVILA--LGWSQPCDVWSIGCILIEYYLG 230
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 87/216 (40%), Gaps = 50/216 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 36 AQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K ++ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 94 PQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMS-------YLLYQMLCGI----KH 141
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + P
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFMMTPY 185
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMVIG 407
V R++ G D++S G ++ EM+ G
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 97/227 (42%), Gaps = 29/227 (12%)
Query: 190 LAPKRFSY-SDVRRMTKSFSDKLGQGGYADVYKGTLPD---GRLVAVKVMKNLKDNGEEF 245
L P + Y +V MT ++G+G + +V++ + D G AVK ++ E F
Sbjct: 46 LKPVDYEYREEVHWMT--HQPRVGRGSFGEVHR--MKDKQTGFQCAVKKVRL-----EVF 96
Query: 246 -INEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWR 304
+ E+ + + S IVP G E + E + GSL Q I E R
Sbjct: 97 RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC-----LPEDR 151
Query: 305 TVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFC-PKISDFGLAKQTEKKESF 363
+Y + + GLEYLH RI+H D+K N+ L D + DFG A +
Sbjct: 152 ALYYLGQAL-EGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207
Query: 364 ISMLD---TRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
S+L GT ++APEV K D++S M+ M+ G
Sbjct: 208 KSLLTGDYIPGTETHMAPEVVMGKP--CDAKVDIWSSCCMMLHMLNG 252
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 89/182 (48%), Gaps = 28/182 (15%)
Query: 219 VYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTS-HVNIVPFLGFCYEKKKRALIY 277
V++G+ GR VAVK M L D + + E+ ++ + H N++ + +C E R L
Sbjct: 32 VFQGSF-QGRPVAVKRM--LIDFCDIALMEIKLLTESDDHPNVIRY--YCSETTDRFLYI 86
Query: 278 EF-MPNGSLDQYIYDHESS--NGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
+ N +L + S N K E+ + + IA G+ +LH +++I+H D+K
Sbjct: 87 ALELCNLNLQDLVESKNVSDENLKLQKEYNPI-SLLRQIASGVAHLH---SLKIIHRDLK 142
Query: 335 PHNIRLD-------------EDFCPKISDFGLAKQTEK-KESFISMLDT-RGTAGYIAPE 379
P NI + E+ ISDFGL K+ + + SF + L+ GT+G+ APE
Sbjct: 143 PQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPE 202
Query: 380 VF 381
+
Sbjct: 203 LL 204
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 97/227 (42%), Gaps = 29/227 (12%)
Query: 190 LAPKRFSY-SDVRRMTKSFSDKLGQGGYADVYKGTLPD---GRLVAVKVMKNLKDNGEEF 245
L P + Y +V MT ++G+G + +V++ + D G AVK ++ E F
Sbjct: 62 LKPVDYEYREEVHWMT--HQPRVGRGSFGEVHR--MKDKQTGFQCAVKKVRL-----EVF 112
Query: 246 -INEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWR 304
+ E+ + + S IVP G E + E + GSL Q I E R
Sbjct: 113 RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC-----LPEDR 167
Query: 305 TVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFC-PKISDFGLAKQTEKKESF 363
+Y + + GLEYLH RI+H D+K N+ L D + DFG A +
Sbjct: 168 ALYYLGQAL-EGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 223
Query: 364 ISMLD---TRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
S+L GT ++APEV K D++S M+ M+ G
Sbjct: 224 KSLLTGDYIPGTETHMAPEVVMGK--PCDAKVDIWSSCCMMLHMLNG 268
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 119/264 (45%), Gaps = 43/264 (16%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVM-KNLKDNGEEFINEVASISRTSHVNIVPFLGFCY 268
LG+G ++ K + AVK++ K ++ N ++ I + H NIV +
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCE--GHPNIVKLHEVFH 76
Query: 269 EKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRI 328
++ L+ E + G L + I K+ I + + ++H ++ +
Sbjct: 77 DQLHTFLVMELLNGGELFERI------KKKKHFSETEASYIMRKLVSAVSHMH---DVGV 127
Query: 329 VHLDIKPHNIRL---DEDFCPKISDFGLAK------QTEKKESFISMLDTRGTAGYIAPE 379
VH D+KP N+ +++ KI DFG A+ Q K F T Y APE
Sbjct: 128 VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF--------TLHYAAPE 179
Query: 380 VFCRHFGGVSHKSDVYSYGMMIHEMVIGR---KNADVKVSCSSEYFPNAIYKQIETEYDF 436
+ ++ G D++S G++++ M+ G+ ++ D ++C+S I K+I+ + DF
Sbjct: 180 LLNQN--GYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAV---EIMKKIK-KGDF 233
Query: 437 QLDGV----VTEEEKEMAKKMILV 456
+G V++E K++ + ++ V
Sbjct: 234 SFEGEAWKNVSQEAKDLIQGLLTV 257
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 29/169 (17%)
Query: 248 EVASISRTSHVNIVPFLGFCYEKKKRA------LIYEFMPNGSLDQYIY---DHESSNGK 298
E+ + +H NI+ L +K L+ E M + +L Q I+ DHE +
Sbjct: 73 ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMS-- 129
Query: 299 RTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTE 358
+YQ+ GI ++LH I+H D+KP NI + D KI DFGLA+
Sbjct: 130 -----YLLYQMLCGI----KHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAC 177
Query: 359 KKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
+ TR Y APEV G + D++S G ++ E+V G
Sbjct: 178 TNFMMTPYVVTR---YYRAPEVILGM--GYAANVDIWSVGCIMGELVKG 221
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 24/205 (11%)
Query: 210 KLGQGGYADVYKGTLPD---GRLVAVKVMKNLKDNGEEFINEVASISRTSHVNIVPFLGF 266
+LG+G + +V++ + D G AVK ++ EE + + + + IVP G
Sbjct: 81 RLGRGSFGEVHR--MEDKQTGFQCAVKKVRLEVFRAEELM----ACAGLTSPRIVPLYGA 134
Query: 267 CYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGCNI 326
E + E + GSL Q + + E R +Y + + GLEYLH +
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLVKEQGC-----LPEDRALYYLGQAL-EGLEYLH---SR 185
Query: 327 RIVHLDIKPHNIRLDEDFC-PKISDFGLAKQTEKKESFISMLD---TRGTAGYIAPEVFC 382
RI+H D+K N+ L D + DFG A + +L GT ++APEV
Sbjct: 186 RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVL 245
Query: 383 RHFGGVSHKSDVYSYGMMIHEMVIG 407
K DV+S M+ M+ G
Sbjct: 246 GR--SCDAKVDVWSSCCMMLHMLNG 268
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 35/214 (16%)
Query: 212 GQGGYADVYKGTLPD-GRLVAVK-VMKNLKDNGEEFINEVASISRTSHVNIVPFLGFCY- 268
GQG + V G G VA+K V+++ + E + + ++ H NIV + Y
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLAVLHHPNIVQLQSYFYT 90
Query: 269 --EKKKRAL----IYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHR 322
E+ +R + + E++P+ H R R V + I L L R
Sbjct: 91 LGERDRRDIYLNVVMEYVPDTL-------HRCC---RNYYRRQVAPPPILIKVFLFQLIR 140
Query: 323 --GC----NIRIVHLDIKPHNIRLDE-DFCPKISDFGLAKQTEKKESFISMLDTRGTAGY 375
GC ++ + H DIKPHN+ ++E D K+ DFG AK+ E ++ + +R Y
Sbjct: 141 SIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSR---YY 197
Query: 376 IAPEVFCRHFGGVSHKS--DVYSYGMMIHEMVIG 407
APE+ FG + + D++S G + EM++G
Sbjct: 198 RAPELI---FGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 116/266 (43%), Gaps = 44/266 (16%)
Query: 209 DKLGQGGYADV---YKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRT-SHVNIVPFL 264
++LG+G ++ V K T + K L + + A I R H NIV
Sbjct: 37 EELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 96
Query: 265 GFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYLHRGC 324
E+ L+++ + G L + I E + ++QI LE ++
Sbjct: 97 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH--CIHQI-------LESVNHIH 147
Query: 325 NIRIVHLDIKPHNIRLD---EDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVF 381
IVH D+KP N+ L + K++DFGLA + + ++ + GT GY++PEV
Sbjct: 148 QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQ--AWFGFAGTPGYLSPEVL 205
Query: 382 CRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFP------NAIYKQIET-EY 434
+ G D+++ G++++ +++G Y P + +Y+QI+ Y
Sbjct: 206 RKDPYG--KPVDIWACGVILYILLVG-------------YPPFWDEDQHKLYQQIKAGAY 250
Query: 435 DF---QLDGVVTEEEKEMAKKMILVS 457
DF + D VT E K + +M+ ++
Sbjct: 251 DFPSPEWD-TVTPEAKNLINQMLTIN 275
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 11/170 (6%)
Query: 241 NGEEFIN-EVASISRTSHVNIVPFLGFCY--EKKKRALIYEFMPNGSLDQYIYDHESSNG 297
NGE + E+ + R H N++ + Y EK+K ++ E+ G Q + D S
Sbjct: 48 NGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGM--QEMLD---SVP 102
Query: 298 KRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQT 357
++ + + GLEYLH + IVH DIKP N+ L KIS G+A+
Sbjct: 103 EKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159
Query: 358 EKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
+ + ++G+ + PE+ K D++S G+ ++ + G
Sbjct: 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 87/216 (40%), Gaps = 50/216 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 37 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 94
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K ++ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 95 PQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMS-------YLLYQMLCGI----KH 142
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + P
Sbjct: 143 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFMMTPY 186
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMVIG 407
V R++ G D++S G ++ EM+ G
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 87/216 (40%), Gaps = 50/216 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K ++ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 94 PQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMS-------YLLYQMLCGI----KH 141
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + P
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFMMTPY 185
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMVIG 407
V R++ G D++S G ++ EM+ G
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP------KISDFGLAKQTEK 359
V QI+ + GL+Y+HR C I+H DIKP N+ ++ P KI+D G A +
Sbjct: 133 VKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD- 189
Query: 360 KESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
E + + + TR Y +PEV G +D++S +I E++ G
Sbjct: 190 -EHYTNSIQTR---EYRSPEVLLGAPWGCG--ADIWSTACLIFELITG 231
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 87/216 (40%), Gaps = 50/216 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 36 AQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K ++ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 94 PQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMS-------YLLYQMLCGI----KH 141
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + P
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFMMTPY 185
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMVIG 407
V R++ G D++S G ++ EM+ G
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCP------KISDFGLAKQTEK 359
V QI+ + GL+Y+HR C I+H DIKP N+ ++ P KI+D G A +
Sbjct: 133 VKQISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD- 189
Query: 360 KESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
E + + + TR Y +PEV G +D++S +I E++ G
Sbjct: 190 -EHYTNSIQTR---EYRSPEVLLGAPWGCG--ADIWSTACLIFELITG 231
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 247 NEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSL-DQYIYDHESSNGKRTLEWRT 305
E+ + + +H I+ F ++ + ++ E M G L D+ + G + L+ T
Sbjct: 63 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV-------GNKRLKEAT 114
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRL---DEDFCPKISDFGLAKQTEKKES 362
+ ++YLH I+H D+KP N+ L +ED KI+DFG +K +
Sbjct: 115 CKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--- 168
Query: 363 FISMLDTR-GTAGYIAPEVFCR-HFGGVSHKSDVYSYGMMI 401
S++ T GT Y+APEV G + D +S G+++
Sbjct: 169 -TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 208
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 247 NEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSL-DQYIYDHESSNGKRTLEWRT 305
E+ + + +H I+ F ++ + ++ E M G L D+ + G + L+ T
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV-------GNKRLKEAT 115
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRL---DEDFCPKISDFGLAKQTEKKES 362
+ ++YLH I+H D+KP N+ L +ED KI+DFG +K +
Sbjct: 116 CKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--- 169
Query: 363 FISMLDTR-GTAGYIAPEVFCR-HFGGVSHKSDVYSYGMMI 401
S++ T GT Y+APEV G + D +S G+++
Sbjct: 170 -TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 247 NEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSL-DQYIYDHESSNGKRTLEWRT 305
E+ + + +H I+ F ++ + ++ E M G L D+ + G + L+ T
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV-------GNKRLKEAT 115
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRL---DEDFCPKISDFGLAKQTEKKES 362
+ ++YLH I+H D+KP N+ L +ED KI+DFG +K +
Sbjct: 116 CKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--- 169
Query: 363 FISMLDTR-GTAGYIAPEVFCR-HFGGVSHKSDVYSYGMMI 401
S++ T GT Y+APEV G + D +S G+++
Sbjct: 170 -TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 247 NEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSL-DQYIYDHESSNGKRTLEWRT 305
E+ + + +H I+ F ++ + ++ E M G L D+ + G + L+ T
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV-------GNKRLKEAT 115
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRL---DEDFCPKISDFGLAKQTEKKES 362
+ ++YLH I+H D+KP N+ L +ED KI+DFG +K +
Sbjct: 116 CKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--- 169
Query: 363 FISMLDTR-GTAGYIAPEVFCR-HFGGVSHKSDVYSYGMMI 401
S++ T GT Y+APEV G + D +S G+++
Sbjct: 170 -TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 247 NEVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSL-DQYIYDHESSNGKRTLEWRT 305
E+ + + +H I+ F ++ + ++ E M G L D+ + G + L+ T
Sbjct: 70 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV-------GNKRLKEAT 121
Query: 306 VYQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRL---DEDFCPKISDFGLAKQTEKKES 362
+ ++YLH I+H D+KP N+ L +ED KI+DFG +K +
Sbjct: 122 CKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--- 175
Query: 363 FISMLDTR-GTAGYIAPEVFCR-HFGGVSHKSDVYSYGMMI 401
S++ T GT Y+APEV G + D +S G+++
Sbjct: 176 -TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 215
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 21/160 (13%)
Query: 248 EVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSL-DQYIYDHESSNGKRTLEWRTV 306
E+ + + +H I+ F ++ + ++ E M G L D+ + G + L+ T
Sbjct: 204 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV-------GNKRLKEATC 255
Query: 307 YQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRL---DEDFCPKISDFGLAKQTEKKESF 363
+ ++YLH I+H D+KP N+ L +ED KI+DFG +K +
Sbjct: 256 KLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---- 308
Query: 364 ISMLDTR-GTAGYIAPEVFCR-HFGGVSHKSDVYSYGMMI 401
S++ T GT Y+APEV G + D +S G+++
Sbjct: 309 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 348
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 21/160 (13%)
Query: 248 EVASISRTSHVNIVPFLGFCYEKKKRALIYEFMPNGSL-DQYIYDHESSNGKRTLEWRTV 306
E+ + + +H I+ F ++ + ++ E M G L D+ + G + L+ T
Sbjct: 190 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVV-------GNKRLKEATC 241
Query: 307 YQIAVGIARGLEYLHRGCNIRIVHLDIKPHNIRL---DEDFCPKISDFGLAKQTEKKESF 363
+ ++YLH I+H D+KP N+ L +ED KI+DFG +K +
Sbjct: 242 KLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---- 294
Query: 364 ISMLDTR-GTAGYIAPEVFCR-HFGGVSHKSDVYSYGMMI 401
S++ T GT Y+APEV G + D +S G+++
Sbjct: 295 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 334
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 26/225 (11%)
Query: 197 YSDVRRMTKSFSDKLGQGGYADVYKG-TLPDGRLVAVKVMKNLKDN-GEEFINEVASISR 254
+ DV ++ + D LG+G +A V L + AVK+++ + EV + +
Sbjct: 10 FEDVYQLQE---DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQ 66
Query: 255 TS-HVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGI 313
H N++ + F E+ + L++E M GS+ +I+ N LE V Q +
Sbjct: 67 CQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFN---ELEASVVVQ---DV 120
Query: 314 ARGLEYLHRGCNIRIVHLDIKPHNIRLDE--DFCP-KISDFGLAKQTE-----KKESFIS 365
A L++LH N I H D+KP NI + P KI DF L + S
Sbjct: 121 ASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPE 177
Query: 366 MLDTRGTAGYIAPEV---FCRHFGGVSHKSDVYSYGMMIHEMVIG 407
+L G+A Y+APEV F + D++S G++++ ++ G
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 28/182 (15%)
Query: 219 VYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTS-HVNIVPFLGFCYEKKKRALIY 277
V++G+ GR VAVK M L D + + E+ ++ + H N++ + +C E R L
Sbjct: 32 VFQGSF-QGRPVAVKRM--LIDFCDIALMEIKLLTESDDHPNVIRY--YCSETTDRFLYI 86
Query: 278 EF-MPNGSLDQYIYDHESS--NGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
+ N +L + S N K E+ + + IA G+ +LH +++I+H D+K
Sbjct: 87 ALELCNLNLQDLVESKNVSDENLKLQKEYNPI-SLLRQIASGVAHLH---SLKIIHRDLK 142
Query: 335 PHNIRLD-------------EDFCPKISDFGLAKQTEKKESFI--SMLDTRGTAGYIAPE 379
P NI + E+ ISDFGL K+ + + ++ + GT+G+ APE
Sbjct: 143 PQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPE 202
Query: 380 VF 381
+
Sbjct: 203 LL 204
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 16/154 (10%)
Query: 258 VNIVPFLGFCYEKKKRALIY-EFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARG 316
V IV Y +K LI E + G L I D G + R +I I
Sbjct: 118 VRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDR----GDQAFTEREASEIXKSIGEA 173
Query: 317 LEYLHRGCNIRIVHLDIKPHNIRLDE---DFCPKISDFGLAKQTEKKESFISMLDTRGTA 373
++YLH +I I H D+KP N+ + K++DFG AK+T S + T
Sbjct: 174 IQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC---YTP 227
Query: 374 GYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
Y+APEV D +S G++ + ++ G
Sbjct: 228 YYVAPEVLGPE--KYDKSCDXWSLGVIXYILLCG 259
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 92/236 (38%), Gaps = 42/236 (17%)
Query: 199 DVRRMTKSFSDKLGQGGYADVYK--GTLPDGRLVAVKVMKNLKDNGEEFINEVASISR-- 254
DV D LG+G + V + GR VAVK++KN+ E +E+ +
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN 69
Query: 255 ----TSHVNIVPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIA 310
S V L + +++E + + YD NG + ++A
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLST-----YDFIKENGFLPFRLDHIRKMA 124
Query: 311 VGIARGLEYLHRGCNIRIVHLDIKPHNIRL-----DEDFCPKIS--------------DF 351
I + + +LH ++ H D+KP NI E + PKI DF
Sbjct: 125 YQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDF 181
Query: 352 GLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVSHKSDVYSYGMMIHEMVIG 407
G A ++ S +++ R Y APEV G S DV+S G ++ E +G
Sbjct: 182 GSATYDDEHHS--TLVXXR---HYRAPEVILA--LGWSQPCDVWSIGCILIEYYLG 230
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 28/182 (15%)
Query: 219 VYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTS-HVNIVPFLGFCYEKKKRALIY 277
V++G+ GR VAVK M L D + + E+ ++ + H N++ + +C E R L
Sbjct: 50 VFQGSF-QGRPVAVKRM--LIDFCDIALMEIKLLTESDDHPNVIRY--YCSETTDRFLYI 104
Query: 278 EF-MPNGSLDQYIYDHESS--NGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
+ N +L + S N K E+ + + IA G+ +LH +++I+H D+K
Sbjct: 105 ALELCNLNLQDLVESKNVSDENLKLQKEYNPI-SLLRQIASGVAHLH---SLKIIHRDLK 160
Query: 335 PHNIRLD-------------EDFCPKISDFGLAKQTEKKESFI--SMLDTRGTAGYIAPE 379
P NI + E+ ISDFGL K+ + + ++ + GT+G+ APE
Sbjct: 161 PQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPE 220
Query: 380 VF 381
+
Sbjct: 221 LL 222
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 86/214 (40%), Gaps = 50/214 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 41 AQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 98
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K ++ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 99 PQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMS-------YLLYQMLCGI----KH 146
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + P
Sbjct: 147 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFMMTPY 190
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMV 405
V R++ G D++S G ++ EMV
Sbjct: 191 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 28/182 (15%)
Query: 219 VYKGTLPDGRLVAVKVMKNLKDNGEEFINEVASISRTS-HVNIVPFLGFCYEKKKRALIY 277
V++G+ GR VAVK M L D + + E+ ++ + H N++ + +C E R L
Sbjct: 50 VFQGSF-QGRPVAVKRM--LIDFCDIALMEIKLLTESDDHPNVIRY--YCSETTDRFLYI 104
Query: 278 EF-MPNGSLDQYIYDHESS--NGKRTLEWRTVYQIAVGIARGLEYLHRGCNIRIVHLDIK 334
+ N +L + S N K E+ + + IA G+ +LH +++I+H D+K
Sbjct: 105 ALELCNLNLQDLVESKNVSDENLKLQKEYNPI-SLLRQIASGVAHLH---SLKIIHRDLK 160
Query: 335 PHNIRLD-------------EDFCPKISDFGLAKQTEKKESFI--SMLDTRGTAGYIAPE 379
P NI + E+ ISDFGL K+ + + ++ + GT+G+ APE
Sbjct: 161 PQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPE 220
Query: 380 VF 381
+
Sbjct: 221 LL 222
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 86/214 (40%), Gaps = 50/214 (23%)
Query: 212 GQGGYADVYKGTLPDGRLVAVKVMKNLKDN---GEEFINEVASISRTSHVNIVPFLGFCY 268
QG Y L R VA+K + N + E+ + +H NI+ L
Sbjct: 30 AQGIVCAAYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 87
Query: 269 EKKKRA------LIYEFMPNGSLDQYI---YDHESSNGKRTLEWRTVYQIAVGIARGLEY 319
+K ++ E M + +L Q I DHE + +YQ+ GI ++
Sbjct: 88 PQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMS-------YLLYQMLCGI----KH 135
Query: 320 LHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPE 379
LH I+H D+KP NI + D KI DFGLA+ T GT+ + P
Sbjct: 136 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------------TAGTSFMMTPY 179
Query: 380 VFCRHFG--------GVSHKSDVYSYGMMIHEMV 405
V R++ G D++S G ++ EMV
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 213
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 330 HLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRHFGGVS 389
H D+KP NI + D + DFG+A T E + +T GT Y APE F +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASAT-TDEKLTQLGNTVGTLYYXAPERFSESHA--T 213
Query: 390 HKSDVYSYGMMIHEMVIG 407
+++D+Y+ +++E + G
Sbjct: 214 YRADIYALTCVLYECLTG 231
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSH--VNI 260
LG GG+ VY G + D VA+K ++ + NG EV + + S +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ L + LI E P D + + E + L +Q+ LE +
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 156
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFG---LAKQTEKKESFISMLDTRGTAGYI 376
N ++H DIK NI +D + K+ DFG L K T D GT Y
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYS 209
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
PE + R+ + V+S G+++++MV G I E+D
Sbjct: 210 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG---------------------DIPFEHDE 247
Query: 437 QLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKV 474
++ G + ++ + + WC+ P DRP+ ++
Sbjct: 248 EIIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSH--VNI 260
LG GG+ VY G + D VA+K ++ + NG EV + + S +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ L + LI E P D + + E + L +Q+ LE +
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 155
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFG---LAKQTEKKESFISMLDTRGTAGYI 376
N ++H DIK NI +D + K+ DFG L K T D GT Y
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYS 208
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
PE + R+ + V+S G+++++MV G I E+D
Sbjct: 209 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG---------------------DIPFEHDE 246
Query: 437 QLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKV 474
++ G + ++ + + WC+ P DRP+ ++
Sbjct: 247 EIIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSH--VNI 260
LG GG+ VY G + D VA+K ++ + NG EV + + S +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ L + LI E P D + + E + L +Q+ LE +
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 155
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFG---LAKQTEKKESFISMLDTRGTAGYI 376
N ++H DIK NI +D + K+ DFG L K T D GT Y
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYS 208
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
PE + R+ + V+S G+++++MV G I E+D
Sbjct: 209 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG---------------------DIPFEHDE 246
Query: 437 QLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKV 474
++ G + ++ + + WC+ P DRP+ ++
Sbjct: 247 EIIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSH--VNI 260
LG GG+ VY G + D VA+K ++ + NG EV + + S +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ L + LI E P D + + E + L +Q+ LE +
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 156
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFG---LAKQTEKKESFISMLDTRGTAGYI 376
N ++H DIK NI +D + K+ DFG L K T D GT Y
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYS 209
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
PE + R+ + V+S G+++++MV G I E+D
Sbjct: 210 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG---------------------DIPFEHDE 247
Query: 437 QLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKV 474
++ G + ++ + + WC+ P DRP+ ++
Sbjct: 248 EIIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSH--VNI 260
LG GG+ VY G + D VA+K ++ + NG EV + + S +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ L + LI E P D + + E + L +Q+ LE +
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 155
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFG---LAKQTEKKESFISMLDTRGTAGYI 376
N ++H DIK NI +D + K+ DFG L K T D GT Y
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYS 208
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
PE + R+ + V+S G+++++MV G I E+D
Sbjct: 209 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG---------------------DIPFEHDE 246
Query: 437 QLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKV 474
++ G + ++ + + WC+ P DRP+ ++
Sbjct: 247 EIIGGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSH--VNI 260
LG GG+ VY G + D VA+K ++ + NG EV + + S +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ L + LI E P D + + E + L +Q+ LE +
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 156
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFG---LAKQTEKKESFISMLDTRGTAGYI 376
N ++H DIK NI +D + K+ DFG L K T D GT Y
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYS 209
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
PE + R+ + V+S G+++++MV G I E+D
Sbjct: 210 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG---------------------DIPFEHDE 247
Query: 437 QLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKV 474
++ G + ++ + + WC+ P DRP+ ++
Sbjct: 248 EIIGGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSH--VNI 260
LG GG+ VY G + D VA+K ++ + NG EV + + S +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ L + LI E P D + + E + L +Q+ LE +
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 156
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFG---LAKQTEKKESFISMLDTRGTAGYI 376
N ++H DIK NI +D + K+ DFG L K T D GT Y
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYS 209
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
PE + R+ + V+S G+++++MV G I E+D
Sbjct: 210 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG---------------------DIPFEHDE 247
Query: 437 QLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKV 474
++ G + ++ + + WC+ P DRP+ ++
Sbjct: 248 EIIGGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSH--VNI 260
LG GG+ VY G + D VA+K ++ + NG EV + + S +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ L + LI E P D + + E + L +Q+ LE +
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 123
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFG---LAKQTEKKESFISMLDTRGTAGYI 376
N ++H DIK NI +D + K+ DFG L K T D GT Y
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYS 176
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
PE + R+ + V+S G+++++MV G I E+D
Sbjct: 177 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG---------------------DIPFEHDE 214
Query: 437 QLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKV 474
++ G + ++ + + WC+ P DRP+ ++
Sbjct: 215 EIIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSH--VNI 260
LG GG+ VY G + D VA+K ++ + NG EV + + S +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ L + LI E P D + + E + L +Q+ LE +
Sbjct: 119 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 170
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFG---LAKQTEKKESFISMLDTRGTAGYI 376
N ++H DIK NI +D + K+ DFG L K T D GT Y
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYS 223
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
PE + R+ + V+S G+++++MV G D+ E ++ +
Sbjct: 224 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQR----- 273
Query: 437 QLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKV 474
V+ E + + + WC+ P DRP+ ++
Sbjct: 274 -----VSSECQHLIR-------WCLALRPSDRPTFEEI 299
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSH--VNI 260
LG GG+ VY G + D VA+K ++ + NG EV + + S +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ L + LI E P D + + E + L +Q+ LE +
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 128
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFG---LAKQTEKKESFISMLDTRGTAGYI 376
N ++H DIK NI +D + K+ DFG L K T D GT Y
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYS 181
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
PE + R+ + V+S G+++++MV G D+ E ++ +
Sbjct: 182 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQR----- 231
Query: 437 QLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKV 474
V+ E + + + WC+ P DRP+ ++
Sbjct: 232 -----VSSECQHLIR-------WCLALRPSDRPTFEEI 257
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSH--VNI 260
LG GG+ VY G + D VA+K ++ + NG EV + + S +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ L + LI E P D + + E + L +Q+ LE +
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 128
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFG---LAKQTEKKESFISMLDTRGTAGYI 376
N ++H DIK NI +D + K+ DFG L K T D GT Y
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYS 181
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
PE + R+ + V+S G+++++MV G D+ E ++ +
Sbjct: 182 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQR----- 231
Query: 437 QLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKV 474
V+ E + + + WC+ P DRP+ ++
Sbjct: 232 -----VSSECQHLIR-------WCLALRPSDRPTFEEI 257
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSH--VNI 260
LG GG+ VY G + D VA+K ++ + NG EV + + S +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ L + LI E P D + + E + L +Q+ LE +
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 143
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFG---LAKQTEKKESFISMLDTRGTAGYI 376
N ++H DIK NI +D + K+ DFG L K T D GT Y
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYS 196
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
PE + R+ + V+S G+++++MV G D+ E ++ +
Sbjct: 197 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQR----- 246
Query: 437 QLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKV 474
V+ E + + + WC+ P DRP+ ++
Sbjct: 247 -----VSSECQHLIR-------WCLALRPSDRPTFEEI 272
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 24/185 (12%)
Query: 325 NIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLDTRGTAGYIAPEVFCRH 384
+ VH DIKP N+ LD + +++DFG + + S + GT YI+PE+
Sbjct: 209 QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV-GTPDYISPEILQAM 267
Query: 385 FGGVSH---KSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDFQLDGV 441
G+ + D +S G+ ++EM+ G + +E K + E FQ
Sbjct: 268 EDGMGKYGPECDWWSLGVCMYEMLYG------ETPFYAESLVETYGKIMNHEERFQFPSH 321
Query: 442 VT---EEEKEMAKKMILVSLWCIQTHPPDRPSMT--KVVEMLEG----SIENLQIPPKPS 492
VT EE K++ +++I C + + + K EG +I NL+ P P
Sbjct: 322 VTDVSEEAKDLIQRLI-----CSRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPD 376
Query: 493 LSLPT 497
+S P+
Sbjct: 377 VSSPS 381
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSH--VNI 260
LG GG+ VY G + D VA+K ++ + NG EV + + S +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ L + LI E P D + + E + L +Q+ LE +
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 123
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFG---LAKQTEKKESFISMLDTRGTAGYI 376
N ++H DIK NI +D + K+ DFG L K T D GT Y
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYS 176
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
PE + R+ + V+S G+++++MV G D+ E ++ +
Sbjct: 177 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQR----- 226
Query: 437 QLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKV 474
V+ E + + + WC+ P DRP+ ++
Sbjct: 227 -----VSSECQHLIR-------WCLALRPSDRPTFEEI 252
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSH--VNI 260
LG GG+ VY G + D VA+K ++ + NG EV + + S +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ L + LI E P D + + E + L +Q+ LE +
Sbjct: 119 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 170
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFG---LAKQTEKKESFISMLDTRGTAGYI 376
N ++H DIK NI +D + K+ DFG L K T D GT Y
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYS 223
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
PE + R+ + V+S G+++++MV G D+ E ++ +
Sbjct: 224 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQR----- 273
Query: 437 QLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKV 474
V+ E + + + WC+ P DRP+ ++
Sbjct: 274 -----VSXECQHLIR-------WCLALRPSDRPTFEEI 299
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSH--VNI 260
LG GG+ VY G + D VA+K ++ + NG EV + + S +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ L + LI E P D + + E + L +Q+ LE +
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 155
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFG---LAKQTEKKESFISMLDTRGTAGYI 376
N ++H DIK NI +D + K+ DFG L K T D GT Y
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYS 208
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
PE + R+ + V+S G+++++MV G D+ E ++ +
Sbjct: 209 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQR----- 258
Query: 437 QLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKV 474
V+ E + + + WC+ P DRP+ ++
Sbjct: 259 -----VSSECQHLIR-------WCLALRPSDRPTFEEI 284
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSH--VNI 260
LG GG+ VY G + D VA+K ++ + NG EV + + S +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ L + LI E P D + + E + L +Q+ LE +
Sbjct: 76 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 127
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFG---LAKQTEKKESFISMLDTRGTAGYI 376
N ++H DIK NI +D + K+ DFG L K T D GT Y
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYS 180
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
PE + R+ + V+S G+++++MV G D+ E ++ +
Sbjct: 181 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQR----- 230
Query: 437 QLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKV 474
V+ E + + + WC+ P DRP+ ++
Sbjct: 231 -----VSSECQHLIR-------WCLALRPSDRPTFEEI 256
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSH--VNI 260
LG GG+ VY G + D VA+K ++ + NG EV + + S +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ L + LI E P D + + E + L +Q+ LE +
Sbjct: 91 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 142
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFG---LAKQTEKKESFISMLDTRGTAGYI 376
N ++H DIK NI +D + K+ DFG L K T D GT Y
Sbjct: 143 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYS 195
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
PE + R+ + V+S G+++++MV G D+ E ++ +
Sbjct: 196 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQR----- 245
Query: 437 QLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKV 474
V+ E + + + WC+ P DRP+ ++
Sbjct: 246 -----VSSECQHLIR-------WCLALRPSDRPTFEEI 271
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Query: 309 IAVGIARGLEYLHRGCNIRIVHLDIKPHNIRLDEDFCPKISDFGLAKQTEKKESFISMLD 368
IA+ L Y+HR DIKP NI +D + +++DFG + + + S +
Sbjct: 186 IAIDSVHQLHYVHR---------DIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA 236
Query: 369 TRGTAGYIAPEVFCRHFGGVSH---KSDVYSYGMMIHEMVIG 407
GT YI+PE+ GG + D +S G+ ++EM+ G
Sbjct: 237 V-GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSH--VNI 260
LG GG+ VY G + D VA+K ++ + NG EV + + S +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ L + LI E P D + + E + L +Q+ LE +
Sbjct: 75 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 126
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFG---LAKQTEKKESFISMLDTRGTAGYI 376
N ++H DIK NI +D + K+ DFG L K T D GT Y
Sbjct: 127 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYS 179
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
PE + R+ + V+S G+++++MV G D+ E ++ +
Sbjct: 180 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQR----- 229
Query: 437 QLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKV 474
V+ E + + + WC+ P DRP+ ++
Sbjct: 230 -----VSSECQHLIR-------WCLALRPSDRPTFEEI 255
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSH--VNI 260
LG GG+ VY G + D VA+K ++ + NG EV + + S +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ L + LI E P D + + E + L +Q+ LE +
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 143
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFG---LAKQTEKKESFISMLDTRGTAGYI 376
N ++H DIK NI +D + K+ DFG L K T D GT Y
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYS 196
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
PE + R+ + V+S G+++++MV G D+ E ++ +
Sbjct: 197 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQR----- 246
Query: 437 QLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKV 474
V+ E + + + WC+ P DRP+ ++
Sbjct: 247 -----VSXECQHLIR-------WCLALRPSDRPTFEEI 272
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSH--VNI 260
LG GG+ VY G + D VA+K ++ + NG EV + + S +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ L + LI E P D + + E + L +Q+ LE +
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 128
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFG---LAKQTEKKESFISMLDTRGTAGYI 376
N ++H DIK NI +D + K+ DFG L K T D GT Y
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYS 181
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
PE + R+ + V+S G+++++MV G D+ E ++ +
Sbjct: 182 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQR----- 231
Query: 437 QLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKV 474
V+ E + + + WC+ P DRP+ ++
Sbjct: 232 -----VSSECQHLIR-------WCLALRPSDRPTFEEI 257
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 211 LGQGGYADVYKGT-LPDGRLVAVKVMKNLK-------DNGEEFINEVASISRTSH--VNI 260
LG GG+ VY G + D VA+K ++ + NG EV + + S +
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 261 VPFLGFCYEKKKRALIYEFMPNGSLDQYIYDHESSNGKRTLEWRTVYQIAVGIARGLEYL 320
+ L + LI E P D + + E + L +Q+ LE +
Sbjct: 99 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQV-------LEAV 150
Query: 321 HRGCNIRIVHLDIKPHNIRLDEDFCP-KISDFG---LAKQTEKKESFISMLDTRGTAGYI 376
N ++H DIK NI +D + K+ DFG L K T D GT Y
Sbjct: 151 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYS 203
Query: 377 APEVFCRHFGGVSHKSDVYSYGMMIHEMVIGRKNADVKVSCSSEYFPNAIYKQIETEYDF 436
PE + R+ + V+S G+++++MV G D+ E ++ +
Sbjct: 204 PPE-WIRYHRYHGRSAAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQR----- 253
Query: 437 QLDGVVTEEEKEMAKKMILVSLWCIQTHPPDRPSMTKV 474
V+ E + + + WC+ P DRP+ ++
Sbjct: 254 -----VSXECQHLIR-------WCLALRPSDRPTFEEI 279
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,140,123
Number of Sequences: 62578
Number of extensions: 629027
Number of successful extensions: 3512
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 365
Number of HSP's that attempted gapping in prelim test: 1579
Number of HSP's gapped (non-prelim): 1144
length of query: 511
length of database: 14,973,337
effective HSP length: 103
effective length of query: 408
effective length of database: 8,527,803
effective search space: 3479343624
effective search space used: 3479343624
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)