BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040809
(161 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|334186554|ref|NP_001190735.1| N-terminal nucleophile aminohydrolases (Ntn hydrolases)-like
protein [Arabidopsis thaliana]
gi|332658164|gb|AEE83564.1| N-terminal nucleophile aminohydrolases (Ntn hydrolases)-like
protein [Arabidopsis thaliana]
Length = 208
Score = 215 bits (548), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 139/208 (66%), Gaps = 47/208 (22%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G LVGE VTSKLLQTS+
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILAKDGVVLVGEKKVTSKLLQTSS 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRY--AYAYQ----EPI--------- 87
S EKMYKIDDHVACAVAGIMSDANILINTARVQA+R+ + +Q +P
Sbjct: 61 SMEKMYKIDDHVACAVAGIMSDANILINTARVQAQRWDRNHGFQLYMSDPSGNYGGWQAA 120
Query: 88 --------------QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGK 133
QDYKDD TR+E VQLA+KVL KTMDSTSLT+EKLELAE++L PS
Sbjct: 121 AVGANNQAAQSILKQDYKDDATREEVVQLAIKVLSKTMDSTSLTAEKLELAELYLTPSKC 180
Query: 134 VKYRICSPESLTMLLENFGVAQPASEVS 161
VKY + SP+SLT LL GV QPA+E S
Sbjct: 181 VKYHVHSPDSLTKLLVKHGVTQPAAETS 208
>gi|217075150|gb|ACJ85935.1| unknown [Medicago truncatula]
Length = 229
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/229 (45%), Positives = 126/229 (55%), Gaps = 68/229 (29%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G LVGE VTSKLLQTST
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTST 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ---------DYKDD 93
S EKMYKIDDHV CAVAGIMSDANILINTAR+QA+RY++AYQEP+ D K
Sbjct: 61 STEKMYKIDDHVVCAVAGIMSDANILINTARIQAQRYSFAYQEPMPVEQLVQSLCDTKQG 120
Query: 94 MTRQEAV-----------------------------------------QLALKVLRKTMD 112
T+ + Q A +L++
Sbjct: 121 YTQFGGLRPFGVSFLFAGWDKNFGFQLYMSDPSGNYGGWKAGAIGANNQAAQSILKQDYK 180
Query: 113 STSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLLENFGVAQPASEVS 161
E + LAEVFL PSGKVK+++CSPE+LT LL GV QPA+E +
Sbjct: 181 DDITREEAVNLAEVFLAPSGKVKHQVCSPENLTKLLVKSGVTQPATETA 229
>gi|356521060|ref|XP_003529176.1| PREDICTED: proteasome subunit alpha type-4-like isoform 1 [Glycine
max]
gi|356521062|ref|XP_003529177.1| PREDICTED: proteasome subunit alpha type-4-like isoform 2 [Glycine
max]
Length = 250
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/105 (72%), Positives = 82/105 (78%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G LVGE VTSKLLQTST
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTST 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EKMYKIDDHVACAVAGIMSDANILINTARVQA+RYAYAYQEP+
Sbjct: 61 STEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYAYAYQEPM 105
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 67/74 (90%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDD+TR+EAVQLALKVL KTMDSTSLTSEKLELAEVFL P+GKVKY++CSPE+LT L
Sbjct: 177 QDYKDDITREEAVQLALKVLSKTMDSTSLTSEKLELAEVFLSPAGKVKYQVCSPENLTKL 236
Query: 148 LENFGVAQPASEVS 161
L FGV QPA++ +
Sbjct: 237 LVKFGVTQPATDTA 250
>gi|255540109|ref|XP_002511119.1| proteasome subunit alpha type, putative [Ricinus communis]
gi|223550234|gb|EEF51721.1| proteasome subunit alpha type, putative [Ricinus communis]
Length = 250
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/105 (70%), Positives = 79/105 (75%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM------------------GCLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y LVGE VTSKLLQTST
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGAVLVGEKKVTSKLLQTST 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EKMYKIDDHVACAVAGIMSDANILINTARVQA+RY YAYQEP+
Sbjct: 61 STEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPM 105
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 67/74 (90%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDD+TR+EAVQLALKVL KTMDSTSLTS+KLELAEVFLLPSG+VKY++CSP+SL+ L
Sbjct: 177 QDYKDDITREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLLPSGEVKYQVCSPDSLSKL 236
Query: 148 LENFGVAQPASEVS 161
L G+ QP+++ S
Sbjct: 237 LVKSGMTQPSADAS 250
>gi|225462543|ref|XP_002266917.1| PREDICTED: proteasome subunit alpha type-4 isoform 2 [Vitis
vinifera]
gi|225462545|ref|XP_002266877.1| PREDICTED: proteasome subunit alpha type-4 isoform 1 [Vitis
vinifera]
gi|147799989|emb|CAN77245.1| hypothetical protein VITISV_018657 [Vitis vinifera]
Length = 250
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 75/105 (71%), Positives = 81/105 (77%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G LVGE VTSKLLQTST
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTST 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EKMYKIDDHVACAVAGIMSDANILINTARVQA+RY YAYQEP+
Sbjct: 61 STEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPM 105
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 65/74 (87%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDD++R++AVQLALKVL KTMDSTSLTS+KLELAEVFL SGKVKY++CS ++L+ L
Sbjct: 177 QDYKDDISREDAVQLALKVLSKTMDSTSLTSDKLELAEVFLSASGKVKYQVCSADALSKL 236
Query: 148 LENFGVAQPASEVS 161
L FGV QPA+E S
Sbjct: 237 LVKFGVTQPAAETS 250
>gi|255637334|gb|ACU18997.1| unknown [Glycine max]
Length = 250
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 75/105 (71%), Positives = 81/105 (77%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G LVGE VTSKLLQTST
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTST 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EKMYKIDDHVACAVAGIMSDANILINTARVQA+RY YAYQEP+
Sbjct: 61 STEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPM 105
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 63/74 (85%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKD +TR+EAVQLALKVL KTMDSTSLTSEKL LAEVFL PSGKVKY +CSPE+LT +
Sbjct: 177 QDYKDGITREEAVQLALKVLSKTMDSTSLTSEKLGLAEVFLSPSGKVKYEVCSPEALTKM 236
Query: 148 LENFGVAQPASEVS 161
L GV QPA++ +
Sbjct: 237 LVKSGVTQPATDTA 250
>gi|356568146|ref|XP_003552274.1| PREDICTED: proteasome subunit alpha type-4-like isoform 1 [Glycine
max]
Length = 250
Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 75/105 (71%), Positives = 81/105 (77%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G LVGE VTSKLLQTST
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTST 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EKMYKIDDHVACAVAGIMSDANILINTARVQA+RY YAYQEP+
Sbjct: 61 STEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPM 105
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/74 (79%), Positives = 67/74 (90%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDD+TR+EAVQLALKVL KTMDSTSLTSEKLELAEVFL PSGKVKY++CSPE+LT L
Sbjct: 177 QDYKDDITREEAVQLALKVLSKTMDSTSLTSEKLELAEVFLSPSGKVKYQVCSPENLTKL 236
Query: 148 LENFGVAQPASEVS 161
L FGV QPA++ +
Sbjct: 237 LVKFGVTQPAADTA 250
>gi|356496249|ref|XP_003516981.1| PREDICTED: proteasome subunit alpha type-4-like isoform 1 [Glycine
max]
gi|356496251|ref|XP_003516982.1| PREDICTED: proteasome subunit alpha type-4-like isoform 2 [Glycine
max]
Length = 250
Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 75/105 (71%), Positives = 81/105 (77%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G LVGE VTSKLLQTST
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTST 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EKMYKIDDHVACAVAGIMSDANILINTARVQA+RY YAYQEP+
Sbjct: 61 STEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPM 105
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 65/74 (87%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDD+TR+EAVQLALKVL KTMDSTSLTSEKLELAEVFL PSGKVKY +CSPE+LT +
Sbjct: 177 QDYKDDITREEAVQLALKVLSKTMDSTSLTSEKLELAEVFLSPSGKVKYEVCSPEALTKM 236
Query: 148 LENFGVAQPASEVS 161
L GV QPA++ +
Sbjct: 237 LVKSGVTQPATDTA 250
>gi|77999303|gb|ABB16998.1| proteasome-like protein alpha subunit [Solanum tuberosum]
Length = 248
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/105 (70%), Positives = 82/105 (78%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G LVGE VTSKLLQTST
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTST 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S+EKMYKIDDHVACAVAGIMSDANILINTARVQA+RY +AYQEP+
Sbjct: 61 SSEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFAYQEPM 105
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/72 (73%), Positives = 62/72 (86%), Gaps = 1/72 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDD+TR+EAVQLALKVL KTMDSTSLTSEKLELAEVF L +GKVKY+ CSPE+L +
Sbjct: 177 QDYKDDITREEAVQLALKVLGKTMDSTSLTSEKLELAEVF-LSNGKVKYQACSPETLNKM 235
Query: 148 LENFGVAQPASE 159
L + G+ QP +E
Sbjct: 236 LVSAGLTQPTAE 247
>gi|76160982|gb|ABA40454.1| proteasome alpha subunit-like protein [Solanum tuberosum]
Length = 256
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/105 (70%), Positives = 82/105 (78%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G LVGE VTSKLLQTST
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTST 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S+EKMYKIDDHVACAVAGIMSDANILINTARVQA+RY +AYQEP+
Sbjct: 61 SSEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFAYQEPM 105
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/72 (73%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDD+TR+EAVQLALKVL KTMDSTSLTSEKLELAEVF L +GKVKY+ CSPE+L +
Sbjct: 177 QDYKDDITREEAVQLALKVLGKTMDSTSLTSEKLELAEVF-LSNGKVKYQACSPETLNKM 235
Query: 148 LENFGVAQPASE 159
L + G+ QP E
Sbjct: 236 LVSAGLTQPKGE 247
>gi|388491474|gb|AFK33803.1| unknown [Medicago truncatula]
gi|388517995|gb|AFK47059.1| unknown [Medicago truncatula]
Length = 250
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/105 (69%), Positives = 82/105 (78%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G LVGE VTSKLLQTST
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTST 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EKMYKIDDHVACAVAGIMSDANILINTAR+QA+RY++AYQEP+
Sbjct: 61 STEKMYKIDDHVACAVAGIMSDANILINTARIQAQRYSFAYQEPM 105
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 66/74 (89%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDD+TR+EAVQLALKVL KTMDSTSLTSEKLELAEVFL PSGKVKY++CSPE+LT L
Sbjct: 177 QDYKDDITREEAVQLALKVLSKTMDSTSLTSEKLELAEVFLSPSGKVKYQVCSPENLTKL 236
Query: 148 LENFGVAQPASEVS 161
L GV QPA++ +
Sbjct: 237 LVKSGVTQPATDTA 250
>gi|449448594|ref|XP_004142051.1| PREDICTED: proteasome subunit alpha type-4-like [Cucumis sativus]
gi|449523001|ref|XP_004168513.1| PREDICTED: proteasome subunit alpha type-4-like [Cucumis sativus]
Length = 249
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/105 (70%), Positives = 81/105 (77%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G LVGE VTSKLLQTST
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSTDGVVLVGEKKVTSKLLQTST 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EKMYK+DDHVACAVAGIMSDANILINTARVQA+RY YAYQEP+
Sbjct: 61 STEKMYKLDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPM 105
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 65/74 (87%), Gaps = 1/74 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDD+TR+EA+QLALKVL KTMDSTSLTSEKLELAEVF L +GKVKY++CSPES++ L
Sbjct: 177 QDYKDDITREEAIQLALKVLSKTMDSTSLTSEKLELAEVF-LSAGKVKYQVCSPESVSRL 235
Query: 148 LENFGVAQPASEVS 161
L G+ QPA+E S
Sbjct: 236 LVKSGLTQPAAEAS 249
>gi|357482775|ref|XP_003611674.1| Proteasome subunit alpha type [Medicago truncatula]
gi|355513009|gb|AES94632.1| Proteasome subunit alpha type [Medicago truncatula]
Length = 250
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/105 (69%), Positives = 82/105 (78%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G LVGE VTSKLLQTST
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTST 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EKMYKIDDHVACAVAGIMSDANILINTAR+QA+RY++AYQEP+
Sbjct: 61 STEKMYKIDDHVACAVAGIMSDANILINTARIQAQRYSFAYQEPM 105
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 65/74 (87%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDD+TR+EAV LALKVL KTMDSTSLTS+KLELAEVFL PSGKVKY++CSPE+LT L
Sbjct: 177 QDYKDDITREEAVNLALKVLSKTMDSTSLTSDKLELAEVFLAPSGKVKYQVCSPENLTKL 236
Query: 148 LENFGVAQPASEVS 161
L GV QPA+E +
Sbjct: 237 LVKSGVTQPATETA 250
>gi|12229904|sp|O82530.1|PSA4_PETHY RecName: Full=Proteasome subunit alpha type-4; AltName: Full=20S
proteasome alpha subunit C; AltName: Full=20S proteasome
subunit alpha-3
gi|3608483|gb|AAC35982.1| proteasome alpha subunit [Petunia x hybrida]
Length = 249
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/105 (69%), Positives = 82/105 (78%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G LVGE VTSKLLQTST
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGISSKDGVVLVGEKKVTSKLLQTST 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S+EKMYKIDDHVACAVAGIMSDANILINTARVQA+RY ++YQEP+
Sbjct: 61 SSEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPM 105
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 62/74 (83%), Gaps = 1/74 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDD+TR+EAVQLALKVL KTMDSTSLTSEKLELAEVF L +GKVKY+ CSPE L +
Sbjct: 177 QDYKDDITREEAVQLALKVLSKTMDSTSLTSEKLELAEVF-LSNGKVKYQACSPEKLNSM 235
Query: 148 LENFGVAQPASEVS 161
L G+ QP++E S
Sbjct: 236 LVKSGLTQPSAEES 249
>gi|15233268|ref|NP_188850.1| proteasome subunit alpha type-4 [Arabidopsis thaliana]
gi|12643237|sp|O81148.1|PSA4_ARATH RecName: Full=Proteasome subunit alpha type-4; AltName: Full=20S
proteasome alpha subunit C-1; AltName: Full=Proteasome
27 kDa subunit; AltName: Full=Proteasome component 9;
AltName: Full=Proteasome subunit alpha type-3
gi|14423432|gb|AAK62398.1|AF386953_1 20S proteasome subunit PAC1 [Arabidopsis thaliana]
gi|3421077|gb|AAC32057.1| 20S proteasome subunit PAC1 [Arabidopsis thaliana]
gi|11994731|dbj|BAB03060.1| 20S proteasome subunit PAC1 [Arabidopsis thaliana]
gi|21554045|gb|AAM63126.1| 20S proteasome subunit PAC1 [Arabidopsis thaliana]
gi|23197586|gb|AAN15320.1| 20S proteasome subunit PAC1 [Arabidopsis thaliana]
gi|332643070|gb|AEE76591.1| proteasome subunit alpha type-4 [Arabidopsis thaliana]
Length = 250
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/105 (69%), Positives = 81/105 (77%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L+GE VTSKLLQTST
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTST 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEKMYKIDDHVACAVAGIMSDANILINTARVQA+RY + YQEP+
Sbjct: 61 SAEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPM 105
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 61/74 (82%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDD TR+EAV+LALKVL KTMDSTSLTSEKLELAEV+L PS VKY + SPESLT L
Sbjct: 177 QDYKDDATREEAVELALKVLTKTMDSTSLTSEKLELAEVYLTPSKTVKYHVHSPESLTKL 236
Query: 148 LENFGVAQPASEVS 161
L GV QPA+E S
Sbjct: 237 LVKHGVTQPAAETS 250
>gi|224086367|ref|XP_002307867.1| predicted protein [Populus trichocarpa]
gi|118484506|gb|ABK94128.1| unknown [Populus trichocarpa]
gi|222853843|gb|EEE91390.1| predicted protein [Populus trichocarpa]
Length = 250
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/105 (69%), Positives = 81/105 (77%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G LVGE VTSKLLQTST
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTST 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EKMYKIDDHVACAVAGIMSDANILINTAR+QA+RY +AYQEP+
Sbjct: 61 STEKMYKIDDHVACAVAGIMSDANILINTARIQAQRYTFAYQEPM 105
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 65/74 (87%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKD++TR+EAVQLALKVL KTMDSTSLTSEKLELAEVFL PSG VKY++CSP+ L+ L
Sbjct: 177 QDYKDEITREEAVQLALKVLSKTMDSTSLTSEKLELAEVFLSPSGNVKYQVCSPDVLSKL 236
Query: 148 LENFGVAQPASEVS 161
L FGV QPA+E S
Sbjct: 237 LVKFGVTQPAAETS 250
>gi|2511584|emb|CAA73624.1| multicatalytic endopeptidase [Arabidopsis thaliana]
Length = 250
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/105 (69%), Positives = 81/105 (77%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L+GE VTSKLLQTST
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYVMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTST 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEKMYKIDDHVACAVAGIMSDANILINTARVQA+RY + YQEP+
Sbjct: 61 SAEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPM 105
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 61/74 (82%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDD TR+EAV+LALKVL KTMDSTSLTSEKLELAEV+L PS VKY + SPESLT L
Sbjct: 177 QDYKDDATREEAVELALKVLTKTMDSTSLTSEKLELAEVYLTPSKTVKYHVHSPESLTKL 236
Query: 148 LENFGVAQPASEVS 161
L GV QPA+E S
Sbjct: 237 LVKHGVTQPAAETS 250
>gi|392938146|gb|AFM94013.1| proteasome alpha type 4 [Beta vulgaris]
Length = 250
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/105 (69%), Positives = 81/105 (77%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G LVGE VTSKLLQT+T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILAKDGVVLVGEKKVTSKLLQTAT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EKMYKIDDHVACAVAGIMSDANILINTARVQA+RY +AYQEP+
Sbjct: 61 SNEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFAYQEPM 105
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 64/74 (86%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDD++R++AVQLALKVL K+MDSTSLTSEKLELAEVFLLPSGKVKY++ SPESL L
Sbjct: 177 QDYKDDISREDAVQLALKVLSKSMDSTSLTSEKLELAEVFLLPSGKVKYQVHSPESLNKL 236
Query: 148 LENFGVAQPASEVS 161
L G+ Q A+E S
Sbjct: 237 LAKSGLTQAAAEAS 250
>gi|449456526|ref|XP_004146000.1| PREDICTED: proteasome subunit alpha type-4-like [Cucumis sativus]
gi|449518445|ref|XP_004166252.1| PREDICTED: proteasome subunit alpha type-4-like isoform 1 [Cucumis
sativus]
gi|449518447|ref|XP_004166253.1| PREDICTED: proteasome subunit alpha type-4-like isoform 2 [Cucumis
sativus]
Length = 250
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/105 (70%), Positives = 80/105 (76%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G LVGE VTSKLLQTST
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTST 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EKMYK+DDHVACAVAGIMSDANILINTARVQA RY YAYQEP+
Sbjct: 61 STEKMYKLDDHVACAVAGIMSDANILINTARVQAMRYTYAYQEPM 105
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 65/74 (87%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDD++R+EA+QLALKVL KTMDSTSLTSEKLELAEVFL PSG VKY++CSPES++ L
Sbjct: 177 QDYKDDISREEAIQLALKVLSKTMDSTSLTSEKLELAEVFLSPSGSVKYQVCSPESVSKL 236
Query: 148 LENFGVAQPASEVS 161
L G+ QPA+E S
Sbjct: 237 LVKSGLTQPAAEAS 250
>gi|357506163|ref|XP_003623370.1| Proteasome subunit alpha type [Medicago truncatula]
gi|355498385|gb|AES79588.1| Proteasome subunit alpha type [Medicago truncatula]
Length = 471
Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/105 (69%), Positives = 82/105 (78%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G LVGE VTSKLLQTST
Sbjct: 222 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTST 281
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EKMYKIDDHVACAVAGIMSDANILINTAR+QA+RY++AYQEP+
Sbjct: 282 STEKMYKIDDHVACAVAGIMSDANILINTARIQAQRYSFAYQEPM 326
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 66/74 (89%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDD+TR+EAVQLALKVL KTMDSTSLTSEKLELAEVFL PSGKVKY++CSPE+LT L
Sbjct: 398 QDYKDDITREEAVQLALKVLSKTMDSTSLTSEKLELAEVFLSPSGKVKYQVCSPENLTKL 457
Query: 148 LENFGVAQPASEVS 161
L GV QPA++ +
Sbjct: 458 LVKSGVTQPATDTA 471
>gi|1709761|sp|P52427.1|PSA4_SPIOL RecName: Full=Proteasome subunit alpha type-4; AltName: Full=20S
proteasome alpha subunit C; AltName: Full=20S proteasome
subunit alpha-3; AltName: Full=Proteasome 27 kDa subunit
gi|1262146|emb|CAA65660.1| proteasome subunit [Spinacia oleracea]
Length = 250
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 72/105 (68%), Positives = 81/105 (77%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L+GE VTSKLLQTST
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILAKDGVVLIGEKKVTSKLLQTST 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EKMYKIDDHVACAVAGIMSDANILINTARVQA+RY ++YQEP+
Sbjct: 61 STEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPM 105
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 64/74 (86%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDD+TR++AV+LALK L KTMDSTSLTSEKLELAEV+LLPSGKVKY++ SPESL L
Sbjct: 177 QDYKDDVTREDAVKLALKALSKTMDSTSLTSEKLELAEVYLLPSGKVKYQVHSPESLNRL 236
Query: 148 LENFGVAQPASEVS 161
L G+ QPA+E S
Sbjct: 237 LTESGLTQPAAETS 250
>gi|255540107|ref|XP_002511118.1| proteasome subunit alpha type, putative [Ricinus communis]
gi|223550233|gb|EEF51720.1| proteasome subunit alpha type, putative [Ricinus communis]
Length = 250
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 73/105 (69%), Positives = 78/105 (74%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM------------------GCLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y LVGE VTSKLLQTST
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGAVLVGEKKVTSKLLQTST 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EKMYKIDDHVACAVAGIMSDANILINTARVQA+ Y YAYQEP+
Sbjct: 61 STEKMYKIDDHVACAVAGIMSDANILINTARVQAQCYTYAYQEPM 105
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 67/74 (90%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDD+TR+EAVQLALKVL KTMDSTSLTS+KLELAEVFLLPSG+VKY++CSP+SL+ L
Sbjct: 177 QDYKDDITREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLLPSGEVKYQVCSPDSLSKL 236
Query: 148 LENFGVAQPASEVS 161
L GV QP+++ S
Sbjct: 237 LVKSGVTQPSADAS 250
>gi|255637272|gb|ACU18966.1| unknown [Glycine max]
Length = 250
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/105 (69%), Positives = 79/105 (75%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G LVGE VTSKLLQTST
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTST 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EKMYKIDDHV CAVAGIMSD NILINTARVQA+RY YAYQEP+
Sbjct: 61 STEKMYKIDDHVTCAVAGIMSDTNILINTARVQAQRYTYAYQEPM 105
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 65/74 (87%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDD+TR+EAVQLALKVL KTMDSTS T EKLELAEVFL PSGKVKY++CSPE+LT L
Sbjct: 177 QDYKDDITREEAVQLALKVLSKTMDSTSFTFEKLELAEVFLSPSGKVKYQVCSPENLTKL 236
Query: 148 LENFGVAQPASEVS 161
L FGV QPA++ +
Sbjct: 237 LVKFGVTQPAADTA 250
>gi|224139550|ref|XP_002323165.1| predicted protein [Populus trichocarpa]
gi|222867795|gb|EEF04926.1| predicted protein [Populus trichocarpa]
Length = 250
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/105 (68%), Positives = 80/105 (76%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G LVGE VTSKLLQTST
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTST 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EKMYKIDDHVA AVAGIMSDANILINTAR+QA+RY +AYQEP+
Sbjct: 61 STEKMYKIDDHVAVAVAGIMSDANILINTARIQAQRYTFAYQEPM 105
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/74 (75%), Positives = 64/74 (86%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDY+D++TR+EAVQLALKVL KTMDSTSLTSEKLELAEVFL PSG VKY+IC P +L+ L
Sbjct: 177 QDYRDEITREEAVQLALKVLSKTMDSTSLTSEKLELAEVFLSPSGNVKYQICPPNALSKL 236
Query: 148 LENFGVAQPASEVS 161
L FGV QPA+E S
Sbjct: 237 LVKFGVTQPAAETS 250
>gi|116779303|gb|ABK21227.1| unknown [Picea sitchensis]
Length = 250
Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 70/105 (66%), Positives = 79/105 (75%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY----MG--------------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L GE +TSKLLQTS
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGAAVGILAKDGVILAGEKRITSKLLQTSK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EKMYK+DDHVACAVAGIM+DANILINTARVQA+RY +AYQEPI
Sbjct: 61 STEKMYKVDDHVACAVAGIMADANILINTARVQAQRYTFAYQEPI 105
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 65/74 (87%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
Q+YKDDMT++EA +LALKV+ K+M++T+++ EKLELAE+FLLPSG+VKY++ SPESL+ L
Sbjct: 177 QEYKDDMTKEEAAELALKVISKSMETTAISPEKLELAELFLLPSGEVKYQVYSPESLSKL 236
Query: 148 LENFGVAQPASEVS 161
LE +AQP +EVS
Sbjct: 237 LEKLNLAQPVAEVS 250
>gi|212721808|ref|NP_001131770.1| proteasome subunit alpha type [Zea mays]
gi|194692490|gb|ACF80329.1| unknown [Zea mays]
gi|413953010|gb|AFW85659.1| proteasome subunit alpha type [Zea mays]
Length = 250
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/105 (67%), Positives = 79/105 (75%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G LVGE VTSKLLQTS
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGILAADGVVLVGEKKVTSKLLQTSR 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEKMYKID H+ACAVAGIMSDANILINTAR+ A+RYA +YQEPI
Sbjct: 61 SAEKMYKIDSHLACAVAGIMSDANILINTARLHAQRYALSYQEPI 105
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/74 (68%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRICSPESLTM 146
QDYKD +TR+EAV LALKVL KTMDSTSLT+EKLELAEVFL P SG+V+Y++CSPE+L
Sbjct: 177 QDYKDGLTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGSGEVQYQVCSPEALGK 236
Query: 147 LLENFGVAQPASEV 160
LL G+ QP E
Sbjct: 237 LLAKSGLTQPTPEA 250
>gi|212276233|ref|NP_001130843.1| uncharacterized protein LOC100191947 [Zea mays]
gi|194690254|gb|ACF79211.1| unknown [Zea mays]
gi|195606230|gb|ACG24945.1| proteasome subunit alpha type 4 [Zea mays]
gi|413943016|gb|AFW75665.1| proteasome C9 1 [Zea mays]
Length = 250
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/105 (67%), Positives = 79/105 (75%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G LVGE VTSKLLQTS
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGILAADGVVLVGEKKVTSKLLQTSR 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEKMYKID H+ACAVAGIMSDANILINTAR+ A+RYA +YQEPI
Sbjct: 61 SAEKMYKIDSHLACAVAGIMSDANILINTARLHAQRYALSYQEPI 105
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRICSPESLTM 146
QDYKD +TR+EAV LALKVL KTMDSTSLT+EKLELAEVFL P +G+V+Y++CSPE+L
Sbjct: 177 QDYKDALTREEAVGLALKVLSKTMDSTSLTAEKLELAEVFLQPDTGEVQYQVCSPEALGK 236
Query: 147 LLENFGVAQPASE 159
LL N G+ QP E
Sbjct: 237 LLANSGLTQPTPE 249
>gi|115466646|ref|NP_001056922.1| Os06g0167600 [Oryza sativa Japonica Group]
gi|75287537|sp|Q5VRG3.1|PSA4B_ORYSJ RecName: Full=Proteasome subunit alpha type-4-2; AltName: Full=20S
proteasome alpha subunit C; AltName: Full=20S proteasome
subunit alpha-3
gi|229564386|sp|P0C8Y9.1|PSA4B_ORYSI RecName: Full=Proteasome subunit alpha type-4-2; AltName: Full=20S
proteasome alpha subunit C; AltName: Full=20S proteasome
subunit alpha-3
gi|5091520|dbj|BAA78755.1| alpha 3 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|55296221|dbj|BAD67962.1| alpha 3 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|113594962|dbj|BAF18836.1| Os06g0167600 [Oryza sativa Japonica Group]
gi|215695502|dbj|BAG90693.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218197662|gb|EEC80089.1| hypothetical protein OsI_21826 [Oryza sativa Indica Group]
gi|222635030|gb|EEE65162.1| hypothetical protein OsJ_20263 [Oryza sativa Japonica Group]
Length = 250
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/105 (66%), Positives = 79/105 (75%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L VGE VTSKLLQTS
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSR 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEKMYKID H+ACAVAGIMSDANIL+NTAR+ A+RYA +YQEPI
Sbjct: 61 SAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPI 105
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/74 (66%), Positives = 62/74 (83%), Gaps = 1/74 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRICSPESLTM 146
QDY+D +TR+EAV LALKVL KTMDSTSLT+EKLELAEVFL P +G+V+Y++CSPE++
Sbjct: 177 QDYRDGLTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQVCSPEAMGK 236
Query: 147 LLENFGVAQPASEV 160
LL G++QPA E
Sbjct: 237 LLAKAGLSQPAPEA 250
>gi|115466708|ref|NP_001056953.1| Os06g0176000 [Oryza sativa Japonica Group]
gi|109892867|sp|P0C1G8.1|PSA4A_ORYSJ RecName: Full=Proteasome subunit alpha type-4-1; AltName: Full=20S
proteasome alpha subunit C; AltName: Full=20S proteasome
subunit alpha-3
gi|223635743|sp|A2Y9X7.2|PSA4A_ORYSI RecName: Full=Proteasome subunit alpha type-4-1; AltName: Full=20S
proteasome alpha subunit C; AltName: Full=20S proteasome
subunit alpha-3
gi|8096319|dbj|BAA95822.1| putative proteasome subunit [Oryza sativa Japonica Group]
gi|8096329|dbj|BAA95832.1| putative proteasome subunit alpha type 4 [Oryza sativa Japonica
Group]
gi|8671496|dbj|BAA96831.1| alpha 3 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|113594993|dbj|BAF18867.1| Os06g0176000 [Oryza sativa Japonica Group]
gi|125596234|gb|EAZ36014.1| hypothetical protein OsJ_20320 [Oryza sativa Japonica Group]
Length = 250
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/105 (66%), Positives = 79/105 (75%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L VGE VTSKLLQTS
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSR 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEKMYKID H+ACAVAGIMSDANIL+NTAR+ A+RYA +YQEPI
Sbjct: 61 SAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPI 105
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/74 (67%), Positives = 62/74 (83%), Gaps = 1/74 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRICSPESLTM 146
QDY+D MTR+EAV LALKVL KTMDSTSLT+EKLELAEVFL P +G+V+Y++CSPE++
Sbjct: 177 QDYRDGMTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQVCSPEAMGK 236
Query: 147 LLENFGVAQPASEV 160
LL G++QPA E
Sbjct: 237 LLAKAGLSQPAPEA 250
>gi|388459636|gb|AFK31633.1| hypothetical protein, partial [Oryza sativa Japonica Group]
Length = 227
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/104 (66%), Positives = 78/104 (75%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y +G L VGE VTSKLLQTS S
Sbjct: 1 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRS 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
AEKMYKID H+ACAVAGIMSDANIL+NTAR+ A+RYA +YQEPI
Sbjct: 61 AEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPI 104
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 46/52 (88%), Gaps = 1/52 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRI 138
QDY+D MTR+EAV LALKVL KTMDSTSLT+EKLELAEV L P +G+V+Y++
Sbjct: 176 QDYRDGMTREEAVALALKVLSKTMDSTSLTAEKLELAEVLLQPGTGEVQYQV 227
>gi|388459653|gb|AFK31641.1| hypothetical protein, partial [Oryza sativa Japonica Group]
Length = 227
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/104 (66%), Positives = 78/104 (75%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y +G L VGE VTSKLLQTS S
Sbjct: 1 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRS 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
AEKMYKID H+ACAVAGIMSDANIL+NTAR+ A+RYA +YQEPI
Sbjct: 61 AEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPI 104
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 47/52 (90%), Gaps = 1/52 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRI 138
QDY+D +TR+EAV LALKVL KTMDSTSLT+EKLELAEVFL P +G+V+Y++
Sbjct: 176 QDYRDGLTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQV 227
>gi|388459624|gb|AFK31627.1| hypothetical protein, partial [Oryza sativa Indica Group]
gi|388459626|gb|AFK31628.1| hypothetical protein, partial [Oryza sativa Indica Group]
gi|388459632|gb|AFK31631.1| hypothetical protein, partial [Oryza sativa Indica Group]
gi|388459638|gb|AFK31634.1| hypothetical protein, partial [Oryza sativa Japonica Group]
gi|388459641|gb|AFK31635.1| hypothetical protein, partial [Oryza sativa Japonica Group]
gi|388459645|gb|AFK31637.1| hypothetical protein, partial [Oryza sativa Japonica Group]
gi|388459659|gb|AFK31644.1| hypothetical protein, partial [Oryza rufipogon]
Length = 227
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/104 (66%), Positives = 78/104 (75%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y +G L VGE VTSKLLQTS S
Sbjct: 1 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRS 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
AEKMYKID H+ACAVAGIMSDANIL+NTAR+ A+RYA +YQEPI
Sbjct: 61 AEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPI 104
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 47/52 (90%), Gaps = 1/52 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRI 138
QDY+D MTR+EAV LALKVL KTMDSTSLT+EKLELAEVFL P +G+V+Y++
Sbjct: 176 QDYRDGMTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQV 227
>gi|388459628|gb|AFK31629.1| hypothetical protein, partial [Oryza sativa Indica Group]
Length = 227
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/104 (66%), Positives = 78/104 (75%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y +G L VGE VTSKLLQTS S
Sbjct: 1 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRS 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
AEKMYKID H+ACAVAGIMSDANIL+NTAR+ A+RYA +YQEPI
Sbjct: 61 AEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPI 104
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 47/52 (90%), Gaps = 1/52 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRI 138
QDY+D MTR+EAV LALKVL KTMDSTSLT+EKLELAEVFL P +G+V+Y++
Sbjct: 176 QDYRDGMTREEAVTLALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQV 227
>gi|388459651|gb|AFK31640.1| hypothetical protein, partial [Oryza sativa Japonica Group]
Length = 227
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/104 (66%), Positives = 78/104 (75%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y +G L VGE VTSKLLQTS S
Sbjct: 1 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRS 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
AEKMYKID H+ACAVAGIMSDANIL+NTAR+ A+RYA +YQEPI
Sbjct: 61 AEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPI 104
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 47/52 (90%), Gaps = 1/52 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRI 138
QDY+D MTR+EAV LALKVL KTMDSTSLT+EKLELAEVFL P +G+V+Y++
Sbjct: 176 QDYRDGMTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQV 227
>gi|388459663|gb|AFK31646.1| hypothetical protein, partial [Oryza rufipogon]
Length = 227
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/104 (65%), Positives = 78/104 (75%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y +G L VGE VTSKLLQTS S
Sbjct: 1 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRS 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
AEKMYKID H+ACAVAG+MSDANIL+NTAR+ A+RYA +YQEPI
Sbjct: 61 AEKMYKIDSHLACAVAGVMSDANILLNTARLHAQRYALSYQEPI 104
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 47/52 (90%), Gaps = 1/52 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRI 138
QDY+D +TR+EAV LALKVL KTMDSTSLT+EKLELAEVFL P +G+V+Y++
Sbjct: 176 QDYRDGLTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQV 227
>gi|388459655|gb|AFK31642.1| hypothetical protein, partial [Oryza sativa Japonica Group]
Length = 227
Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 68/104 (65%), Positives = 78/104 (75%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y +G L VGE VTSKLLQTS S
Sbjct: 1 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRS 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
AEKMY+ID H+ACAVAGIMSDANIL+NTAR+ A+RYA +YQEPI
Sbjct: 61 AEKMYRIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPI 104
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 47/52 (90%), Gaps = 1/52 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRI 138
QDY+D MTR+EAV LALKVL KTMD+TSLT+EKLELAEVFL P +G+V+Y++
Sbjct: 176 QDYRDGMTREEAVALALKVLSKTMDTTSLTAEKLELAEVFLQPGTGEVQYQV 227
>gi|388459643|gb|AFK31636.1| hypothetical protein, partial [Oryza sativa Japonica Group]
Length = 227
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/104 (65%), Positives = 78/104 (75%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTSTS 43
SRRYD ++T+FSPEGRLYQV+Y +G L VGE VTSKLLQTS S
Sbjct: 1 SRRYDSRSTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRS 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
AEKMYKID H+ACAVAGIMSDANIL+NTAR+ A+RYA +YQEPI
Sbjct: 61 AEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPI 104
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 47/52 (90%), Gaps = 1/52 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRI 138
QDY+D MTR+EAV LALKVL KTMDSTSLT+EKLELAEVFL P +G+V+Y++
Sbjct: 176 QDYRDGMTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQV 227
>gi|357125088|ref|XP_003564227.1| PREDICTED: proteasome subunit alpha type-4-1-like [Brachypodium
distachyon]
Length = 250
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/105 (64%), Positives = 78/105 (74%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G LVGE VTSKLLQ S
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGILASDGVVLVGEKKVTSKLLQASR 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEKMYK+D H+ACAVAGIMSDANILI+TAR+ A+RYA +YQEPI
Sbjct: 61 SAEKMYKVDSHLACAVAGIMSDANILIHTARLHAQRYALSYQEPI 105
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/74 (66%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRICSPESLTM 146
QDY+D MTR+EAV LALKVL KTMDSTSLT+EKLELAEVFL P +G+V+Y++CSP+++
Sbjct: 177 QDYRDGMTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQLCSPDAMGK 236
Query: 147 LLENFGVAQPASEV 160
LL G+ QPA E
Sbjct: 237 LLAKAGLTQPAPEA 250
>gi|357125152|ref|XP_003564259.1| PREDICTED: proteasome subunit alpha type-4-1-like [Brachypodium
distachyon]
Length = 250
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/105 (65%), Positives = 78/105 (74%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G LVGE VTSKLLQ+S
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGILAADGVVLVGEKKVTSKLLQSSR 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEKMYKID H+ACAVAGIMSDANILINTAR+ A+RYA +YQE I
Sbjct: 61 SAEKMYKIDSHLACAVAGIMSDANILINTARLHAQRYALSYQEAI 105
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRICSPESLTM 146
QDY+D MTR+EAV LALKVL KTMDSTSLT+EKLELAEVFL P +G+V+Y++CSP+++
Sbjct: 177 QDYRDGMTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQVCSPDAMGK 236
Query: 147 LLENFGVAQPASEV 160
LL G+ QPA +
Sbjct: 237 LLAKAGLTQPAPDA 250
>gi|388459657|gb|AFK31643.1| hypothetical protein, partial [Oryza rufipogon]
Length = 227
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/104 (65%), Positives = 77/104 (74%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y +G L VGE VTSKLLQTS
Sbjct: 1 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRP 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
AEKMYKID H+ACAVAGIMSDANIL+NTAR+ A+RYA +YQEPI
Sbjct: 61 AEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPI 104
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 47/52 (90%), Gaps = 1/52 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRI 138
QDY+D MTR+EAV LALKVL KTMDSTSLT+EKLELAEVFL P +G+V+Y++
Sbjct: 176 QDYRDGMTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQV 227
>gi|388459649|gb|AFK31639.1| hypothetical protein, partial [Oryza sativa Japonica Group]
Length = 227
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/104 (65%), Positives = 77/104 (74%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y +G L VGE VTSKLLQTS
Sbjct: 1 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRP 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
AEKMYKID H+ACAVAGIMSDANIL+NTAR+ A+RYA +YQEPI
Sbjct: 61 AEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPI 104
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 46/52 (88%), Gaps = 1/52 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRI 138
QDY+D MTR+EAV LALKVL KTMDS SLT+EKLELAEVFL P +G+V+Y++
Sbjct: 176 QDYRDGMTREEAVALALKVLSKTMDSISLTAEKLELAEVFLQPGTGEVQYQV 227
>gi|388459647|gb|AFK31638.1| hypothetical protein, partial [Oryza sativa Japonica Group]
Length = 227
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/104 (65%), Positives = 77/104 (74%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGR YQV+Y +G L VGE VTSKLLQTS S
Sbjct: 1 SRRYDSRTTIFSPEGRPYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRS 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
AEKMYKID H+ACAVAGIMSDANIL+NTAR+ A+RYA +YQEPI
Sbjct: 61 AEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPI 104
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 47/52 (90%), Gaps = 1/52 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRI 138
QDY+D MTR+EAV LALKVL KTMDSTSLT+EKLELAEVFL P +G+V+Y++
Sbjct: 176 QDYRDGMTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQV 227
>gi|14594915|emb|CAC43318.1| putative alpha3 proteasome subunit [Nicotiana tabacum]
Length = 167
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/100 (68%), Positives = 76/100 (76%), Gaps = 18/100 (18%)
Query: 6 DRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEKM 47
D +TT+FSPEGRLYQV+Y +G LVGE VTSKLLQTSTS EKM
Sbjct: 1 DSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILAKDGVVLVGEKKVTSKLLQTSTSTEKM 60
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
YKIDDHVACAVAGIMSDANILINTARVQA+RY ++YQEP+
Sbjct: 61 YKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPM 100
>gi|125600168|gb|EAZ39744.1| hypothetical protein OsJ_24182 [Oryza sativa Japonica Group]
Length = 186
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/105 (64%), Positives = 76/105 (72%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY----MG--------------CLVGENNVTSKLLQTST 42
MSRRYD + T+FSPEGRLYQV Y +G LVGE VTSKLLQTS
Sbjct: 1 MSRRYDSRMTIFSPEGRLYQVQYAMEAIGNAGSALCVLAADGVVLVGEKKVTSKLLQTSC 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEKMYKID H+ACAVAGIMSDANIL+NTAR+ A+RY +YQEPI
Sbjct: 61 SAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYILSYQEPI 105
>gi|297607192|ref|NP_001059598.2| Os07g0468800 [Oryza sativa Japonica Group]
gi|255677751|dbj|BAF21512.2| Os07g0468800 [Oryza sativa Japonica Group]
Length = 207
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/105 (64%), Positives = 76/105 (72%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY----MG--------------CLVGENNVTSKLLQTST 42
MSRRYD + T+FSPEGRLYQV Y +G LVGE VTSKLLQTS
Sbjct: 52 MSRRYDSRMTIFSPEGRLYQVQYAMEAIGNAGSALCVLAADGVVLVGEKKVTSKLLQTSC 111
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEKMYKID H+ACAVAGIMSDANIL+NTAR+ A+RY +YQEPI
Sbjct: 112 SAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYILSYQEPI 156
>gi|388459661|gb|AFK31645.1| hypothetical protein, partial [Oryza rufipogon]
Length = 227
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/104 (65%), Positives = 77/104 (74%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRL QV+Y +G L VGE VTSKLLQTS S
Sbjct: 1 SRRYDSRTTIFSPEGRLCQVEYAVEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRS 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
AEKMYKID H+ACAVAGIMSDANIL+NTAR+ A+RYA +YQEPI
Sbjct: 61 AEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPI 104
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 47/52 (90%), Gaps = 1/52 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRI 138
QDY+D MTR+EAV LALKVL KTMDSTSLT+EKLELAEVFL P +G+V+Y++
Sbjct: 176 QDYRDGMTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQV 227
>gi|388459630|gb|AFK31630.1| hypothetical protein, partial [Oryza sativa Indica Group]
Length = 227
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 77/104 (74%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTSTS 43
SRRYD +TT+FS EGRLYQV+Y +G L VGE VTSKLLQTS S
Sbjct: 1 SRRYDSRTTIFSSEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRS 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
AEKMYKID H+ACAVAG+MSDANIL+NTAR+ A+RYA +YQEPI
Sbjct: 61 AEKMYKIDSHLACAVAGVMSDANILLNTARLHAQRYALSYQEPI 104
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 47/52 (90%), Gaps = 1/52 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRI 138
QDY+D MTR+EAV LALKVL KTMDSTSLT+EKLELAEVFL P +G+V+Y++
Sbjct: 176 QDYRDGMTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQV 227
>gi|388459634|gb|AFK31632.1| hypothetical protein, partial [Oryza sativa Japonica Group]
Length = 227
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/104 (65%), Positives = 77/104 (74%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY----MG--------------CLVGENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y +G LVGE VTSKLLQTS S
Sbjct: 1 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALAVLAADGVVLVGEKKVTSKLLQTSRS 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
AEKMYKID H+A AVAGIMSDANIL+NTAR+ A+RYA +YQEPI
Sbjct: 61 AEKMYKIDSHLARAVAGIMSDANILLNTARLHAQRYALSYQEPI 104
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 47/52 (90%), Gaps = 1/52 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRI 138
QDY+D +TR+EAV LALKVL KTMDSTSLT+E+LELAEVFL P +G+V+Y++
Sbjct: 176 QDYRDGLTREEAVALALKVLSKTMDSTSLTAERLELAEVFLQPGTGEVQYQV 227
>gi|6984140|gb|AAF34770.1|AF227625_1 proteasome 27 kDa subunit [Euphorbia esula]
Length = 242
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/97 (68%), Positives = 74/97 (76%), Gaps = 18/97 (18%)
Query: 9 TTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEKMYKI 50
TT+FSPEGRLYQV+Y +G LVGE VTSKLLQTSTS EKMYKI
Sbjct: 1 TTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKI 60
Query: 51 DDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
DDHV+CAVAGIMSDANILINTARVQA+RY ++YQEP+
Sbjct: 61 DDHVSCAVAGIMSDANILINTARVQAQRYYFSYQEPM 97
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 68/74 (91%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKD++TR+EAVQLALKVL KTMDSTSLTS+KLELAEVFLLPSGKVKY++CSPE+++ L
Sbjct: 169 QDYKDEITREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLLPSGKVKYQVCSPETVSKL 228
Query: 148 LENFGVAQPASEVS 161
L +GV QP+++ S
Sbjct: 229 LVQYGVTQPSADAS 242
>gi|168041029|ref|XP_001772995.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675728|gb|EDQ62220.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 250
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/105 (62%), Positives = 74/105 (70%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAISNAGAAIGVLAKDGVVLAAEKRVTSKLLATLK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EKMYKIDDHVACAVAGIM+DANILINTAR+ A+RY AYQEP+
Sbjct: 61 STEKMYKIDDHVACAVAGIMADANILINTARLSAQRYTLAYQEPM 105
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 59/72 (81%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDDM+R++AVQLALKVL KTMDSTSL++EKLELAE+ L P G +Y++CSPE+L L
Sbjct: 177 QDYKDDMSREQAVQLALKVLSKTMDSTSLSAEKLELAEISLSPEGVFQYQVCSPENLNKL 236
Query: 148 LENFGVAQPASE 159
L +G+ Q A E
Sbjct: 237 LLKYGITQAAEE 248
>gi|168054345|ref|XP_001779592.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668990|gb|EDQ55586.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 250
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/105 (62%), Positives = 74/105 (70%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAISNAGAAIGVLAKDGVVLAAEKRVTSKLLATLK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EKMYKIDDHVACAVAGIM+DANILINTAR+ A+RY AYQEP+
Sbjct: 61 STEKMYKIDDHVACAVAGIMADANILINTARLSAQRYTLAYQEPM 105
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 59/72 (81%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDDMTR++AVQLALKVL KTMDSTSL++EKLELAE+ L P G +Y++CSPE+L L
Sbjct: 177 QDYKDDMTREQAVQLALKVLSKTMDSTSLSAEKLELAEISLSPDGVFQYQVCSPENLNKL 236
Query: 148 LENFGVAQPASE 159
L G+ QP+ E
Sbjct: 237 LLKHGITQPSEE 248
>gi|168039234|ref|XP_001772103.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676566|gb|EDQ63047.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 250
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/105 (62%), Positives = 74/105 (70%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAISNAGAAIGVLAKDGVVLAAEKRVTSKLLATLK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EKMYKIDDHVACAVAGIM+DANILINTAR+ A+RY AYQEP+
Sbjct: 61 STEKMYKIDDHVACAVAGIMADANILINTARLSAQRYTLAYQEPM 105
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 58/72 (80%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDDMTR++AVQLALKVL KTMDSTSL++EKLELAE+ L P G +Y++CSPE+L L
Sbjct: 177 QDYKDDMTREQAVQLALKVLSKTMDSTSLSAEKLELAEISLSPDGVFQYQVCSPENLNKL 236
Query: 148 LENFGVAQPASE 159
L G+ Q A E
Sbjct: 237 LLKHGITQAAEE 248
>gi|356568148|ref|XP_003552275.1| PREDICTED: proteasome subunit alpha type-4-like isoform 2 [Glycine
max]
Length = 226
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/74 (79%), Positives = 67/74 (90%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDD+TR+EAVQLALKVL KTMDSTSLTSEKLELAEVFL PSGKVKY++CSPE+LT L
Sbjct: 153 QDYKDDITREEAVQLALKVLSKTMDSTSLTSEKLELAEVFLSPSGKVKYQVCSPENLTKL 212
Query: 148 LENFGVAQPASEVS 161
L FGV QPA++ +
Sbjct: 213 LVKFGVTQPAADTA 226
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/61 (90%), Positives = 57/61 (93%)
Query: 27 LVGENNVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
LVGE VTSKLLQTSTS EKMYKIDDHVACAVAGIMSDANILINTARVQA+RY YAYQEP
Sbjct: 21 LVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEP 80
Query: 87 I 87
+
Sbjct: 81 M 81
>gi|356521064|ref|XP_003529178.1| PREDICTED: proteasome subunit alpha type-4-like isoform 3 [Glycine
max]
Length = 226
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/74 (78%), Positives = 67/74 (90%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDD+TR+EAVQLALKVL KTMDSTSLTSEKLELAEVFL P+GKVKY++CSPE+LT L
Sbjct: 153 QDYKDDITREEAVQLALKVLSKTMDSTSLTSEKLELAEVFLSPAGKVKYQVCSPENLTKL 212
Query: 148 LENFGVAQPASEVS 161
L FGV QPA++ +
Sbjct: 213 LVKFGVTQPATDTA 226
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/61 (91%), Positives = 58/61 (95%)
Query: 27 LVGENNVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
LVGE VTSKLLQTSTS EKMYKIDDHVACAVAGIMSDANILINTARVQA+RYAYAYQEP
Sbjct: 21 LVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYAYAYQEP 80
Query: 87 I 87
+
Sbjct: 81 M 81
>gi|302758604|ref|XP_002962725.1| hypothetical protein SELMODRAFT_227361 [Selaginella moellendorffii]
gi|302797208|ref|XP_002980365.1| hypothetical protein SELMODRAFT_178123 [Selaginella moellendorffii]
gi|300151981|gb|EFJ18625.1| hypothetical protein SELMODRAFT_178123 [Selaginella moellendorffii]
gi|300169586|gb|EFJ36188.1| hypothetical protein SELMODRAFT_227361 [Selaginella moellendorffii]
Length = 254
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 71/105 (67%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL S
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAISNAGAAIGVLARDGVVLAAEKRVTSKLLAASR 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EKMYKID HVA AVAGIM+DANILINTARV A+ Y +YQEP+
Sbjct: 61 STEKMYKIDGHVAAAVAGIMADANILINTARVAAQGYTLSYQEPM 105
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRICSPESLTM 146
QDYKD++TR+EAV LALKVL KTMDSTSL++EKLELAE++++P SG VKY +CS +L
Sbjct: 177 QDYKDEITREEAVALALKVLSKTMDSTSLSAEKLELAELYVVPESGAVKYEVCSAANLNK 236
Query: 147 LLENFGV 153
LL G+
Sbjct: 237 LLVKHGI 243
>gi|452822764|gb|EME29780.1| 20S proteasome subunit alpha 3 [Galdieria sulphuraria]
Length = 250
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 70/105 (66%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y G VG E + SKLL+T+
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGAAVGVLSQEGVVLAAEKKIISKLLETAK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EKMY ID HVACAVAGI +DANILI AR+ A+RY Y YQEPI
Sbjct: 61 STEKMYAIDQHVACAVAGITADANILIGRARITAQRYFYTYQEPI 105
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
DY+DD++ ++A++L +KVL KTMDS LTSEKLE A + + + + S E L LL
Sbjct: 178 DYQDDISLKDALKLTVKVLGKTMDSAQLTSEKLEFATLSFVKPELIGFHQLSSEELNSLL 237
Query: 149 ENFGVAQPASE 159
+ G +SE
Sbjct: 238 QECGYVASSSE 248
>gi|440803659|gb|ELR24542.1| 20S proteasome alpha subunit C, putative [Acanthamoeba castellanii
str. Neff]
Length = 251
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 72/105 (68%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y G VG E + SKLL+
Sbjct: 1 MARRYDARTTIFSPEGRLYQVEYAMEAISHAGAAVGILGKDGVVLACEKKIASKLLEPGK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EKMY+IDDH+ACAVAGI +DANIL+N +R+ A+RY +AYQEP+
Sbjct: 61 RSEKMYRIDDHIACAVAGITADANILLNFSRLAAQRYLFAYQEPV 105
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 42/61 (68%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDY D+ + QEA++LA+KVL KTMDST+L+ +KLE + + +G +++ + + + L
Sbjct: 177 QDYSDEFSVQEALKLAVKVLSKTMDSTALSPDKLEFSVLRRAAAGHIEFHSLTEKEIADL 236
Query: 148 L 148
L
Sbjct: 237 L 237
>gi|290992071|ref|XP_002678658.1| proteasome subunit alpha [Naegleria gruberi]
gi|284092271|gb|EFC45914.1| proteasome subunit alpha [Naegleria gruberi]
Length = 236
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT FSPEGRLYQV+Y +G L E +TSKLL
Sbjct: 1 MSRRYDNRTTTFSPEGRLYQVEYAMEAISHAGAALGIIATDGIVLAAEKKITSKLLDNEK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
EKMYK+D H+ CAVAGI +DANILIN+AR+ A+RY + YQEPI
Sbjct: 61 KTEKMYKLDKHIGCAVAGITADANILINSARLHAQRYQFMYQEPI 105
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRI 138
Q++K+D+ A +LA+KV+ KTMDSTSL+SEKLE SG+V Y +
Sbjct: 177 QEWKEDLKIGAAKKLAVKVMTKTMDSTSLSSEKLEFITFTKDQSGEVVYTV 227
>gi|1524178|emb|CAA96517.1| proteasome subunit [Medicago sativa]
Length = 101
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 63/72 (87%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDD+TR+EAV LALKVL KTMD TSLTS+KLELAEVFL PSGKVKY++CSPE+LT L
Sbjct: 28 QDYKDDITREEAVNLALKVLSKTMDRTSLTSDKLELAEVFLAPSGKVKYQVCSPENLTKL 87
Query: 148 LENFGVAQPASE 159
L GV QPA+E
Sbjct: 88 LVKSGVTQPATE 99
>gi|294925361|ref|XP_002778904.1| proteasome subunit, putative [Perkinsus marinus ATCC 50983]
gi|239887750|gb|EER10699.1| proteasome subunit, putative [Perkinsus marinus ATCC 50983]
Length = 249
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 70/105 (66%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY--------------MG----CLVGENNVTSKLLQTST 42
M+RRYD +TT FSPEGRLYQV+Y +G L GE SKLL++
Sbjct: 1 MARRYDSRTTTFSPEGRLYQVEYAMEAINNAGSTVGVLGKQCVILAGEKKTISKLLESGK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++EK+Y IDDHV CAVAGI SDAN+LIN R+ A+RY YAYQEPI
Sbjct: 61 ASEKIYPIDDHVVCAVAGITSDANVLINQLRLSAQRYRYAYQEPI 105
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
D+ +DM+ ++ + L KVL K+MD+ + T+E LE + L +V +R+ S + + L+
Sbjct: 178 DWHEDMSTKDCLDLVAKVLVKSMDTATPTAETLEFGVLTLNKDKEVAFRMLSDDEINTLM 237
Query: 149 ENFGVAQPASE 159
+P E
Sbjct: 238 AAAKPEKPDDE 248
>gi|294891066|ref|XP_002773403.1| proteasome subunit, putative [Perkinsus marinus ATCC 50983]
gi|239878556|gb|EER05219.1| proteasome subunit, putative [Perkinsus marinus ATCC 50983]
Length = 249
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 70/105 (66%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY--------------MG----CLVGENNVTSKLLQTST 42
M+RRYD +TT FSPEGRLYQV+Y +G L GE SKLL++
Sbjct: 1 MARRYDSRTTTFSPEGRLYQVEYAMEAINNAGSTVGVLGKQCVILAGEKKTISKLLESGK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++EK+Y IDDHV CAVAGI SDAN+LIN R+ A+RY YAYQEPI
Sbjct: 61 ASEKIYPIDDHVVCAVAGITSDANVLINQLRLSAQRYRYAYQEPI 105
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
D+ +DM+ ++ + L KVL K+MD+ + T+E LE + L +V +R+ S + + L+
Sbjct: 178 DWHEDMSTKDCLDLVAKVLVKSMDTATPTAETLEFGVLTLNKDNEVAFRMLSDDEINTLM 237
Query: 149 ENFGVAQPASE 159
+P E
Sbjct: 238 AAAKPEKPDDE 248
>gi|428176368|gb|EKX45253.1| proteasome subunit alpha type 4 [Guillardia theta CCMP2712]
Length = 246
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 73/105 (69%), Gaps = 19/105 (18%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
M+RRYD +TT FSPEGRLYQV+Y G VG E +TSKLL+ +
Sbjct: 1 MARRYDSRTTTFSPEGRLYQVEYAMEAISHAGICVGILAKDGIVLAVEKKITSKLLE-NI 59
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S+EKMYK+DDH+ACAVAGI +DANILIN AR+ A+RY+ YQEPI
Sbjct: 60 SSEKMYKVDDHLACAVAGITADANILINYARLAAQRYSLTYQEPI 104
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
Q+YK+DM EAV+LA+KVL K+MDSTSLTSEKLE+A V ++ G ++Y+I ++
Sbjct: 176 QEYKNDMELTEAVKLAIKVLNKSMDSTSLTSEKLEIATVSMV-EGSLQYKILDGATVDAA 234
Query: 148 LENFGVAQP 156
L+ + QP
Sbjct: 235 LKELDL-QP 242
>gi|297835202|ref|XP_002885483.1| hypothetical protein ARALYDRAFT_479726 [Arabidopsis lyrata subsp.
lyrata]
gi|297331323|gb|EFH61742.1| hypothetical protein ARALYDRAFT_479726 [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 66/89 (74%), Gaps = 18/89 (20%)
Query: 17 RLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEKMYKIDDHVACAV 58
RLYQV+Y +G L+GE VTSKLLQTSTSAEKMYKIDDHVACAV
Sbjct: 25 RLYQVEYAMEAIGNAGSAIGILSTDGVVLIGEKKVTSKLLQTSTSAEKMYKIDDHVACAV 84
Query: 59 AGIMSDANILINTARVQARRYAYAYQEPI 87
AGIMSDANILINTARVQA+RY + YQEP+
Sbjct: 85 AGIMSDANILINTARVQAQRYTFMYQEPM 113
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 62/74 (83%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDD TR+EAV+LALKVL KTMDSTSLTSEKLELAEV+L PSG VKY + SPESLT L
Sbjct: 185 QDYKDDATREEAVELALKVLTKTMDSTSLTSEKLELAEVYLTPSGNVKYHVHSPESLTKL 244
Query: 148 LENFGVAQPASEVS 161
L GV QPA+E S
Sbjct: 245 LVKHGVTQPAAETS 258
>gi|449670290|ref|XP_002166397.2| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit alpha
type-4-like [Hydra magnipapillata]
Length = 221
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 105/199 (52%), Gaps = 52/199 (26%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRL+QV+Y +G L E T+KLL
Sbjct: 1 MSRRYDTRTTIFSPEGRLFQVEYAMEAISHAGTCLGILATDGVVLAAERRNTNKLLDDVL 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI--------------- 87
S +K+YK+D++ C+VAGI SDAN+L R+ A+RY YQE +
Sbjct: 61 S-DKIYKLDENTVCSVAGITSDANVLTAQLRLTAQRYLLLYQEAMPVEQLVSSLCDLKQR 119
Query: 88 ----------------QDYKDD-MTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP 130
QDY +D M +EA+QLA+KVL KT+D LTSEK+E+A
Sbjct: 120 YTQVGGIFFAAISMLKQDYNEDGMNLEEALQLAVKVLGKTLDVQKLTSEKVEIAH-LTRK 178
Query: 131 SGKVKYRICSPESLTMLLE 149
+G+ K I S + + +LL+
Sbjct: 179 NGQTKIHILSSDEINILLQ 197
>gi|328874968|gb|EGG23333.1| proteasome subunit alpha type 4 [Dictyostelium fasciculatum]
Length = 250
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 72/106 (67%), Gaps = 19/106 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTS- 41
M+RRYD++TT+FSPEGR+YQV+Y G VG E +KLL +S
Sbjct: 1 MARRYDQRTTIFSPEGRIYQVEYAMAAIRHAGATVGILASDGIVLAAEKKTIAKLLDSSK 60
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
T AEKM+KIDDHV CAVAGI SDANILIN AR+ ++RY Y YQEP+
Sbjct: 61 TQAEKMFKIDDHVVCAVAGITSDANILINHARLSSQRYFYTYQEPM 106
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 90 YKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLLE 149
YK DM +EA++LALKVL KTMD +++ SEKLE + + GK+ Y + + L ++
Sbjct: 181 YKPDMQLKEALELALKVLTKTMDRSNINSEKLEFSYI-TRKDGKLVYHLFDAKELDDFIK 239
Query: 150 NFGVAQPASE 159
+ Q + +
Sbjct: 240 ATDLGQESDD 249
>gi|379994190|gb|AFD22722.1| proteasome subunit alpha type 4, partial [Collodictyon triciliatum]
Length = 168
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 72/105 (68%), Gaps = 19/105 (18%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E +TSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAISHAGACIGILSSEGVVLASEKKITSKLLEP-T 59
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EKMY++DDH+ACAVAGI SDANILIN ARV ++RY YQEP+
Sbjct: 60 KSEKMYRLDDHIACAVAGITSDANILINYARVASQRYLLTYQEPM 104
>gi|159489306|ref|XP_001702638.1| 20S proteasome alpha subunit C [Chlamydomonas reinhardtii]
gi|158280660|gb|EDP06417.1| 20S proteasome alpha subunit C [Chlamydomonas reinhardtii]
Length = 253
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 73/108 (67%), Gaps = 21/108 (19%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L+ E +TSKLL T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAISNAGASIGLLAKDGVVLIAEKKITSKLLDTHA 60
Query: 43 SA---EKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
EKMY+ID+H+AC+VAGI +DANILINT R+ A+RY +AYQEP+
Sbjct: 61 VGVRREKMYRIDNHIACSVAGITADANILINTCRLAAQRYLFAYQEPM 108
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFL-LPSGKVKYRICSPESLTML 147
D+K+D+ EA+ +KVL K+MD TSL +K+ELA + SGKV Y+I LT L
Sbjct: 181 DFKEDLPLSEAIPFIIKVLAKSMD-TSLAPDKVELATISRDAASGKVVYKIYDAPELTPL 239
Query: 148 LE 149
L+
Sbjct: 240 LD 241
>gi|294931563|ref|XP_002779937.1| proteasome subunit, putative [Perkinsus marinus ATCC 50983]
gi|239889655|gb|EER11732.1| proteasome subunit, putative [Perkinsus marinus ATCC 50983]
Length = 249
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 70/105 (66%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY--------------MG----CLVGENNVTSKLLQTST 42
M+RRYD +TT FSPEGRLYQV+Y +G L GE SKLL++
Sbjct: 1 MARRYDSRTTTFSPEGRLYQVEYAMEAINNAGSTVGVLGKQCVILAGEKKTISKLLESGK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++EK+Y IDDHV CAVAGI SDAN+LIN R+ A+RY Y+YQEP+
Sbjct: 61 ASEKIYPIDDHVVCAVAGITSDANVLINQLRLSAQRYRYSYQEPV 105
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
D+ +DM+ +E + L KVL K+MD+ + T+E LE + L +V +R+ S + + L+
Sbjct: 178 DWHEDMSTKECLDLVAKVLVKSMDTATPTAETLEFGVLTLNKDKEVAFRMLSDDEINTLM 237
Query: 149 ENFGVAQPASE 159
+PA E
Sbjct: 238 AAAKPEKPADE 248
>gi|193875858|gb|ACF24565.1| proteasome alpha 4 subunit [Gymnochlora stellata]
Length = 249
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 69/105 (65%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTST 42
MSRRYD TT+FSP+GRL+QV+Y G L+ E +TSKLL
Sbjct: 1 MSRRYDSHTTIFSPQGRLFQVEYAMEAISKAGSAVALLASDGVLLAAEKRITSKLLDIRG 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
AEKMYKIDDHVA AVAGI +DANIL+N AR+ A+RY AYQEPI
Sbjct: 61 LAEKMYKIDDHVAVAVAGITADANILVNYARLAAQRYRLAYQEPI 105
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 89 DYKDDMTRQE-AVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
DYK T + A LA+KVL K +D+T+ +++KLE + + +L GK Y++ + E + L
Sbjct: 178 DYKIGGTDMKMAKTLAVKVLAKMLDTTNPSADKLEFSSI-ILEKGKPVYKVFNKEDIKTL 236
Query: 148 LENFGVAQPAS 158
L++ G+ + S
Sbjct: 237 LKDSGMEEKKS 247
>gi|66813358|ref|XP_640858.1| proteasome subunit alpha type 4 [Dictyostelium discoideum AX4]
gi|464458|sp|P34119.1|PSA4_DICDI RecName: Full=Proteasome subunit alpha type-4; AltName:
Full=Proteasome component DD4
gi|347509|gb|AAA33233.1| proteasome [Dictyostelium discoideum]
gi|60468781|gb|EAL66781.1| proteasome subunit alpha type 4 [Dictyostelium discoideum AX4]
Length = 250
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 74/106 (69%), Gaps = 19/106 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
M+RRYD++TT+FSPEGR+YQV+Y G VG E T+KLL +ST
Sbjct: 1 MARRYDQRTTIFSPEGRVYQVEYAMTAIRHAGATVGILAKDGIVLAAEKKTTAKLLDSST 60
Query: 43 S-AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S +EKM+KID+HV CAVAGI SDANILIN AR+ ++R+ Y YQEP+
Sbjct: 61 SISEKMFKIDEHVVCAVAGITSDANILINYARLSSQRFFYQYQEPM 106
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
+YK D++ +EA+QLALKVL KTMD +++ SEKLE + F V Y I + L +
Sbjct: 180 NYKPDISLKEALQLALKVLTKTMDRSNINSEKLEFS-YFTKQGDNVVYHIFTAAELDAFI 238
Query: 149 E 149
+
Sbjct: 239 K 239
>gi|297804748|ref|XP_002870258.1| hypothetical protein ARALYDRAFT_493374 [Arabidopsis lyrata subsp.
lyrata]
gi|297316094|gb|EFH46517.1| hypothetical protein ARALYDRAFT_493374 [Arabidopsis lyrata subsp.
lyrata]
Length = 451
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/110 (60%), Positives = 73/110 (66%), Gaps = 11/110 (10%)
Query: 27 LVGENNVTSKLLQTSTSAEKMYKIDDHVACAVAGI---------MSDANILINTARVQAR 77
LVGE VTSKLLQTS S EKMYKIDDHVACAVAG MSD + + A
Sbjct: 342 LVGEKKVTSKLLQTSMSTEKMYKIDDHVACAVAGWDKNHGFQLYMSDPSGNYGGWKAAAV 401
Query: 78 RYAYAYQEPI--QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAE 125
+ I QDYKDD TR+E VQLA+KVL KTMDSTSLT+EKLELAE
Sbjct: 402 GANNQAAQSILKQDYKDDATREEVVQLAIKVLSKTMDSTSLTAEKLELAE 451
>gi|307106430|gb|EFN54676.1| hypothetical protein CHLNCDRAFT_24644 [Chlorella variabilis]
Length = 247
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 72/108 (66%), Gaps = 21/108 (19%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y G VG E +TSKLL T
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISNAGSCVGILAKDGVVLAAEKRITSKLLDTQA 60
Query: 43 SA---EKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
EKMY++DDH+ACAVAGI +DANIL+NT R+QA+R+ + YQEP+
Sbjct: 61 VGVRREKMYRLDDHIACAVAGITADANILVNTCRLQAQRHLFTYQEPM 108
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 30/35 (85%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLEL 123
DYKD+++ +EA +L +KVL KTMDST+L+ +K+EL
Sbjct: 181 DYKDELSLEEATKLVIKVLSKTMDSTTLSPDKVEL 215
>gi|330841264|ref|XP_003292621.1| proteasome subunit alpha type 4 [Dictyostelium purpureum]
gi|325077121|gb|EGC30855.1| proteasome subunit alpha type 4 [Dictyostelium purpureum]
Length = 249
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 74/106 (69%), Gaps = 19/106 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLL-QTS 41
M+RRYD++TT+FSPEGR+YQV+Y G VG E T+KLL Q++
Sbjct: 1 MARRYDQRTTIFSPEGRVYQVEYAMTAIRHAGATVGILAKDGIVLAAEKKTTAKLLDQST 60
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
T +EKM+KID+HV CAVAGI SDANILIN AR+ ++RY Y YQEP+
Sbjct: 61 TISEKMFKIDEHVVCAVAGITSDANILINYARLSSQRYYYQYQEPM 106
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
+YK D++ +EA+ LALKVL KTMD +++ S+KLE + F K+ Y I + E L +
Sbjct: 180 NYKPDISLKEALTLALKVLTKTMDRSNINSDKLEFS-YFTRIGDKIVYHILTAEELDSFI 238
Query: 149 E 149
+
Sbjct: 239 K 239
>gi|34978952|gb|AAQ83685.1| proteasome subunit alpha-3 [Allium sativum]
Length = 144
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/61 (85%), Positives = 57/61 (93%)
Query: 27 LVGENNVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
LVGE VTSKLLQTS S EKMYKIDDH+ACAVAGIMSDANILINTARVQA+RYA++YQEP
Sbjct: 26 LVGEKKVTSKLLQTSKSTEKMYKIDDHLACAVAGIMSDANILINTARVQAQRYAFSYQEP 85
Query: 87 I 87
+
Sbjct: 86 M 86
>gi|190899780|gb|ACE98403.1| 20S proteasome [Populus tremula]
gi|190899782|gb|ACE98404.1| 20S proteasome [Populus tremula]
gi|190899784|gb|ACE98405.1| 20S proteasome [Populus tremula]
gi|190899786|gb|ACE98406.1| 20S proteasome [Populus tremula]
gi|190899788|gb|ACE98407.1| 20S proteasome [Populus tremula]
gi|190899790|gb|ACE98408.1| 20S proteasome [Populus tremula]
gi|190899792|gb|ACE98409.1| 20S proteasome [Populus tremula]
gi|190899794|gb|ACE98410.1| 20S proteasome [Populus tremula]
gi|190899796|gb|ACE98411.1| 20S proteasome [Populus tremula]
gi|190899798|gb|ACE98412.1| 20S proteasome [Populus tremula]
gi|190899800|gb|ACE98413.1| 20S proteasome [Populus tremula]
gi|190899802|gb|ACE98414.1| 20S proteasome [Populus tremula]
gi|190899804|gb|ACE98415.1| 20S proteasome [Populus tremula]
gi|190899806|gb|ACE98416.1| 20S proteasome [Populus tremula]
gi|190899808|gb|ACE98417.1| 20S proteasome [Populus tremula]
gi|190899810|gb|ACE98418.1| 20S proteasome [Populus tremula]
gi|190899812|gb|ACE98419.1| 20S proteasome [Populus tremula]
gi|190899814|gb|ACE98420.1| 20S proteasome [Populus tremula]
gi|190899816|gb|ACE98421.1| 20S proteasome [Populus tremula]
gi|190899818|gb|ACE98422.1| 20S proteasome [Populus tremula]
gi|190899820|gb|ACE98423.1| 20S proteasome [Populus tremula]
gi|190899822|gb|ACE98424.1| 20S proteasome [Populus tremula]
gi|190899824|gb|ACE98425.1| 20S proteasome [Populus tremula]
gi|190899826|gb|ACE98426.1| 20S proteasome [Populus tremula]
gi|190899828|gb|ACE98427.1| 20S proteasome [Populus tremula]
gi|190899830|gb|ACE98428.1| 20S proteasome [Populus tremula]
gi|190899832|gb|ACE98429.1| 20S proteasome [Populus tremula]
gi|190899834|gb|ACE98430.1| 20S proteasome [Populus tremula]
gi|190899836|gb|ACE98431.1| 20S proteasome [Populus tremula]
gi|190899838|gb|ACE98432.1| 20S proteasome [Populus tremula]
Length = 168
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/62 (83%), Positives = 56/62 (90%)
Query: 26 CLVGENNVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
LVGE VTSKLLQTSTS EKMYKIDDHVA AVAGIMSDANILINTAR+QA+RY +AYQE
Sbjct: 3 VLVGEKKVTSKLLQTSTSTEKMYKIDDHVAVAVAGIMSDANILINTARIQAQRYTFAYQE 62
Query: 86 PI 87
P+
Sbjct: 63 PM 64
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/31 (87%), Positives = 30/31 (96%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTS 118
QDYKD++TR+EAVQLALKVL KTMDSTSLTS
Sbjct: 136 QDYKDEITREEAVQLALKVLSKTMDSTSLTS 166
>gi|281201444|gb|EFA75654.1| proteasome subunit alpha type 4 [Polysphondylium pallidum PN500]
Length = 250
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 72/106 (67%), Gaps = 19/106 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
M+RRYD++TT+FSPEGR+YQV+Y G VG E +KLL +S
Sbjct: 1 MARRYDQRTTIFSPEGRIYQVEYAMTAIRHAGATVGILAQDGIVLAAEKKTVAKLLDSSL 60
Query: 43 S-AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S +EKM+KIDDHV CAVAGI SDANILIN AR+ ++RY Y YQEP+
Sbjct: 61 SQSEKMFKIDDHVVCAVAGITSDANILINYARLSSQRYYYNYQEPM 106
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
+YK D++ +EA++LALKVL KTMD +++ S+KLE + + K+ Y I + L +
Sbjct: 180 NYKPDLSLKEALELALKVLTKTMDRSNINSDKLEFSYI-TRKDDKLVYHIFDAKELDQFI 238
Query: 149 E 149
+
Sbjct: 239 K 239
>gi|190899840|gb|ACE98433.1| 20S proteasome [Populus tremula]
gi|190899842|gb|ACE98434.1| 20S proteasome [Populus tremula]
gi|190899844|gb|ACE98435.1| 20S proteasome [Populus tremula]
gi|190899846|gb|ACE98436.1| 20S proteasome [Populus tremula]
gi|190899848|gb|ACE98437.1| 20S proteasome [Populus tremula]
gi|190899850|gb|ACE98438.1| 20S proteasome [Populus tremula]
gi|190899852|gb|ACE98439.1| 20S proteasome [Populus tremula]
gi|190899854|gb|ACE98440.1| 20S proteasome [Populus tremula]
Length = 168
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/62 (83%), Positives = 56/62 (90%)
Query: 26 CLVGENNVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
LVGE VTSKLLQTSTS EKMYKIDDHVA AVAGIMSDANILINTAR+QA+RY +AYQE
Sbjct: 3 VLVGEKKVTSKLLQTSTSTEKMYKIDDHVAGAVAGIMSDANILINTARIQAQRYTFAYQE 62
Query: 86 PI 87
P+
Sbjct: 63 PM 64
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/31 (87%), Positives = 30/31 (96%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTS 118
QDYKD++TR+EAVQLALKVL KTMDSTSLTS
Sbjct: 136 QDYKDEITREEAVQLALKVLSKTMDSTSLTS 166
>gi|384246616|gb|EIE20105.1| 20S proteasome alpha subunit C [Coccomyxa subellipsoidea C-169]
Length = 255
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 71/108 (65%), Gaps = 21/108 (19%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E +TSKLL T+
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISNAGAALGVLAVDGVVLAAEKRITSKLLDTNA 60
Query: 43 SA---EKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
EKMYK+ DHVACAVAGI +DANILIN R+ A++Y +AYQEPI
Sbjct: 61 VGVRREKMYKLADHVACAVAGITADANILINKCRLAAQQYEFAYQEPI 108
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDY D++T A++L K+L KTMDSTSL+ EK+ELA + +G+V YR+ L L
Sbjct: 180 QDYTDEITLDMAIKLVTKILSKTMDSTSLSPEKVELATISKNAAGEVVYRVYEDADLQPL 239
Query: 148 LE 149
L+
Sbjct: 240 LD 241
>gi|302833389|ref|XP_002948258.1| 20S proteasome alpha subunit C [Volvox carteri f. nagariensis]
gi|300266478|gb|EFJ50665.1| 20S proteasome alpha subunit C [Volvox carteri f. nagariensis]
Length = 253
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 72/108 (66%), Gaps = 21/108 (19%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G LV E +TSKLL T
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISNAGASIGLLAKDGIVLVAEKKITSKLLDTHA 60
Query: 43 SA---EKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
EKMY+ID+H+AC+VAGI +DANIL+N R+ A+RY +AYQEP+
Sbjct: 61 VGVRREKMYRIDNHIACSVAGITADANILLNICRLAAQRYLFAYQEPM 108
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRICSPESLTML 147
D+K+D+ EA+ +KVL K+MD TSLT +K+ELA V P SG+V Y+I L L
Sbjct: 181 DFKEDLPMSEAIPFIIKVLAKSMD-TSLTPDKVELATVTRDPGSGEVLYKIYEAAELQPL 239
Query: 148 LE 149
L+
Sbjct: 240 LD 241
>gi|237834583|ref|XP_002366589.1| proteasome subunit alpha type 4, subunit [Toxoplasma gondii ME49]
gi|211964253|gb|EEA99448.1| proteasome subunit alpha type 4, subunit [Toxoplasma gondii ME49]
gi|221486124|gb|EEE24394.1| proteasome subunit alpha type 4, subunit, putative [Toxoplasma
gondii GT1]
gi|221503621|gb|EEE29312.1| proteasome subunit alpha type 4, subunit, putative [Toxoplasma
gondii VEG]
Length = 252
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 67/104 (64%), Gaps = 18/104 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
M+RRYD +TT FSPEGRLYQV+Y +G L + VTSKLL
Sbjct: 1 MARRYDSRTTTFSPEGRLYQVEYALEAINNASSTLGILATDGVVLAADKMVTSKLLDQGR 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
+ EK+YK+DDHV CAVAG+ +DANILIN AR+ +RY YAY EP
Sbjct: 61 TKEKIYKVDDHVMCAVAGLTADANILINQARLTGQRYLYAYDEP 104
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPS--GKVKYRICSPESLT 145
Q++K+D+ A+ LA KVL KTMD+ + T++KLE+A V P+ ++ R+ S E +T
Sbjct: 177 QEWKEDLDVDGALLLAAKVLNKTMDTAAPTADKLEIAIVRKDPADDSRLIQRLLSNEEVT 236
Query: 146 MLLE 149
L++
Sbjct: 237 ALIK 240
>gi|125554282|gb|EAY99887.1| hypothetical protein OsI_21882 [Oryza sativa Indica Group]
Length = 226
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 55/61 (90%)
Query: 27 LVGENNVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
LVGE VTSKLLQTS SAEKMYKID H+ACAVAGIMSDANIL+NTAR+ A+RYA +YQEP
Sbjct: 21 LVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEP 80
Query: 87 I 87
I
Sbjct: 81 I 81
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRICSPESLTM 146
QDY+D MTR+EAV LALKVL KTMDSTSLT+EKLELAEVFL P +G+V+Y++CSPE++
Sbjct: 153 QDYRDGMTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQVCSPEAMGK 212
Query: 147 LLENFGVAQPASE 159
LL G++QPA E
Sbjct: 213 LLAKAGLSQPAPE 225
>gi|326433120|gb|EGD78690.1| proteasome subunit alpha type-4 [Salpingoeca sp. ATCC 50818]
Length = 281
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 71/105 (67%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLVGENNV-------TSKLLQTST 42
M+ RYD +TT+FSPEGRLYQV+Y +G L E V T+KLL S+
Sbjct: 1 MAHRYDTRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGVVLAAEKISTAKLLDMSS 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK++K+D+HVAC+VAGI +DANIL+N R+ A+R+ YQEPI
Sbjct: 61 SAEKIFKLDEHVACSVAGITADANILVNYLRLTAQRHYLTYQEPI 105
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 43/61 (70%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
+YK++ T +EA+ LA+KVL KTMDST LT+E+LE A + +G+ Y + +PE + LL
Sbjct: 178 EYKEECTLEEALLLAVKVLNKTMDSTKLTAERLEFATMTKDENGRPTYSVLTPERVGQLL 237
Query: 149 E 149
+
Sbjct: 238 K 238
>gi|323449973|gb|EGB05857.1| hypothetical protein AURANDRAFT_60228 [Aureococcus anophagefferens]
Length = 256
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 67/105 (63%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYDR T FSPEGRL+QV+Y +G L GE +KLL+
Sbjct: 1 MARRYDRNVTTFSPEGRLHQVEYAVEAINNAGTAVGLLATDGVVMAGEKQKVTKLLEPPK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S+EK+YK+DDHVAC VAG+ +DANILIN ARV ++RY Y Y E I
Sbjct: 61 SSEKIYKLDDHVACVVAGLTADANILINEARVASQRYTYQYGEAI 105
>gi|401404806|ref|XP_003881853.1| putative proteasome subunit alpha type 4, subunit [Neospora caninum
Liverpool]
gi|325116267|emb|CBZ51820.1| putative proteasome subunit alpha type 4, subunit [Neospora caninum
Liverpool]
Length = 252
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 67/104 (64%), Gaps = 18/104 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
M+RRYD +TT FSPEGRLYQV+Y +G L + VTSKLL
Sbjct: 1 MARRYDSRTTTFSPEGRLYQVEYALEAINNASSTLGILAQDGVVLAADKMVTSKLLDQGR 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
+ EK+YK+DDHV CAVAG+ +DANILI+ AR+ +RY YAY EP
Sbjct: 61 TKEKIYKVDDHVMCAVAGLTADANILISQARLIGQRYLYAYDEP 104
>gi|255070011|ref|XP_002507087.1| proteasome_alpha-4 subunit [Micromonas sp. RCC299]
gi|226522362|gb|ACO68345.1| proteasome_alpha-4 subunit [Micromonas sp. RCC299]
Length = 248
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 70/105 (66%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
M+RRYD TT FSPEGRLYQV+Y G VG E + SKLL+ T
Sbjct: 1 MARRYDSHTTTFSPEGRLYQVEYAMEAISHAGAAVGIRTNFGVVLAAEKKILSKLLEIGT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++EKM+K+DDH+A AVAG+ SDAN+L+N+AR+ A+R+A +Y E +
Sbjct: 61 ASEKMHKLDDHIAVAVAGVNSDANLLMNSARIFAQRHALSYSEQV 105
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 30/38 (78%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEV 126
DY + M+ +A +LA+KVL++TMDST+L EK+E+ E+
Sbjct: 178 DYTEHMSILDAKKLAVKVLKQTMDSTTLLPEKVEMCEI 215
>gi|384484558|gb|EIE76738.1| proteasome subunit alpha type-4 [Rhizopus delemar RA 99-880]
Length = 247
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISQAGIALGILAKDGIVIAAEKKVTSKLLENDA 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S+EK+YK++D++ C VAGI +DANILIN R A+RY ++Y E I
Sbjct: 61 SSEKIYKLNDNIICGVAGITADANILINWTRASAQRYLFSYNEEI 105
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QD+K+DMT +EA LA+KVL KTMDST+LTSEKLE A + L + KVKY + PE + L
Sbjct: 177 QDHKEDMTLEEAKALAIKVLSKTMDSTTLTSEKLEFATI-QLENEKVKYNLYKPEEINSL 235
Query: 148 LENFGVAQPASE 159
L+ V A+E
Sbjct: 236 LKEQNVGGNATE 247
>gi|384501132|gb|EIE91623.1| hypothetical protein RO3G_16334 [Rhizopus delemar RA 99-880]
Length = 249
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISQAGIALGILAKDGIVIAAEKKVTSKLLENDA 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S+EK+YK++D++ C VAGI +DANILIN R A+RY ++Y E I
Sbjct: 61 SSEKIYKLNDNIICGVAGITADANILINWTRASAQRYLFSYNEEI 105
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QD+K+DMT +EA LA+KVL KTMDST+LTSEKLE A + L KV Y + PE + L
Sbjct: 177 QDHKEDMTLEEAKALAIKVLSKTMDSTTLTSEKLEFATI-QLQDEKVHYNLYKPEEINAL 235
Query: 148 L--ENFGVAQPASE 159
L +N G ++E
Sbjct: 236 LKEQNVGGNTDSAE 249
>gi|169769230|ref|XP_001819085.1| proteasome subunit alpha type-4 [Aspergillus oryzae RIB40]
gi|83766943|dbj|BAE57083.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 255
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 69/105 (65%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G LV E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILVKDGIVLAAEKKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYTLNDNMICAVAGMTADANILINYARQAAQRYLLTYDEEI 105
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D +EA +A+KVL KTMDST L+SEK+E A V GKV + + + + + L
Sbjct: 177 QDYKEDCDLKEACAMAVKVLSKTMDSTKLSSEKIEFATVGKTQEGKVYHHLWNADEINAL 236
Query: 148 LENFGVAQPASE 159
L+ G+A+ E
Sbjct: 237 LKQHGLAKVDDE 248
>gi|242094848|ref|XP_002437914.1| hypothetical protein SORBIDRAFT_10g004740 [Sorghum bicolor]
gi|241916137|gb|EER89281.1| hypothetical protein SORBIDRAFT_10g004740 [Sorghum bicolor]
Length = 148
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/84 (64%), Positives = 59/84 (70%), Gaps = 18/84 (21%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G LVGE VTSKLLQTS
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGILAADGVVLVGEKKVTSKLLQTSR 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDAN 66
SAEKMYKID H+ACAVAGIMSDA
Sbjct: 61 SAEKMYKIDSHLACAVAGIMSDAT 84
>gi|167524615|ref|XP_001746643.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774913|gb|EDQ88539.1| predicted protein [Monosiga brevicollis MX1]
Length = 263
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 67/105 (63%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MS RYD +TT+FSPEGRLYQV+Y +G L E +KLL S+
Sbjct: 1 MSHRYDTRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAKDGILLAAEKKHVAKLLDQSS 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+AEK+YK+DDHVAC VAGI +DANIL+N+ R A+R+ +Q PI
Sbjct: 61 AAEKIYKLDDHVACGVAGITADANILVNSLRQSAQRHLLTFQTPI 105
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
+Y +D T +EA+ LA+KVL KTMDS SLTS+KLE A + + V + + PE++ LL
Sbjct: 178 EYSEDCTLKEALLLAVKVLNKTMDSASLTSDKLEFATLSRQGTETV-FSVMKPEAVQELL 236
>gi|440637274|gb|ELR07193.1| 20S proteasome subunit alpha 3 [Geomyces destructans 20631-21]
Length = 255
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 69/105 (65%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILATDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG++SDANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMVSDANILINYARQAAQRYLLTYNEDI 105
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESL-TM 146
QDYK+D +EA +A+KVL KTMD+T L+SEK+E A V GK+ + + S E + T+
Sbjct: 177 QDYKEDCNLKEACVMAVKVLSKTMDATKLSSEKIEFATVGKTKEGKIYHHLWSAEEIETL 236
Query: 147 LLEN 150
L EN
Sbjct: 237 LKEN 240
>gi|425778303|gb|EKV16437.1| Proteasome subunit alpha type [Penicillium digitatum Pd1]
gi|425780680|gb|EKV18684.1| Proteasome subunit alpha type [Penicillium digitatum PHI26]
Length = 255
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y I+D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYTINDNMICAVAGMNADANILINYARQNAQRYLLTYNEDI 105
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D +EA +A+KVL KTMDST L+SEK+E A V GK+ + + + + + L
Sbjct: 177 QDYKEDCDLKEACAMAVKVLSKTMDSTKLSSEKIEFATVGKTKDGKIYHHLWTADEIDSL 236
Query: 148 LENFGVAQPASE 159
L G+A+ E
Sbjct: 237 LREQGLAKVDDE 248
>gi|302403749|ref|XP_002999713.1| proteasome subunit alpha type-4 [Verticillium albo-atrum VaMs.102]
gi|261361469|gb|EEY23897.1| proteasome subunit alpha type-4 [Verticillium albo-atrum VaMs.102]
gi|346970693|gb|EGY14145.1| proteasome component Y13 [Verticillium dahliae VdLs.17]
Length = 251
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAQDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYTVNDNMICAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D +A LA+KVL KTMDST L++EKLE A V GK+ +R+ S E + L
Sbjct: 177 QDYKEDCKLTDACGLAVKVLSKTMDSTKLSAEKLEFATVGQTSDGKIYHRLWSAEEIKQL 236
Query: 148 LENFGVAQPAS 158
L+ +A+ S
Sbjct: 237 LKEHDLAKDES 247
>gi|255932237|ref|XP_002557675.1| Pc12g08450 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582294|emb|CAP80472.1| Pc12g08450 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 255
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y I+D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYTINDNMICAVAGMNADANILINYARQNAQRYLLTYNEDI 105
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D +EA +A+KVL KTMDST L+SEK+E A V GK+ + + + + + L
Sbjct: 177 QDYKEDCDLKEACAMAVKVLSKTMDSTKLSSEKIEFATVGKTRDGKIYHHLWTADEIDSL 236
Query: 148 LENFGVAQPASE 159
L G+A+ E
Sbjct: 237 LREQGLAKVDDE 248
>gi|50308239|ref|XP_454120.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643255|emb|CAG99207.1| KLLA0E03917p [Kluyveromyces lactis]
Length = 249
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 68/104 (65%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ TS
Sbjct: 3 SRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMTEQGIVLAAERKVTSKLLEQDTS 62
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D++ AVAG+ +DA ILINTARVQA+ Y Y E I
Sbjct: 63 SEKLYKLNDNITVAVAGLTADAEILINTARVQAQSYLKTYNEEI 106
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
DYKDD+T A++LALK L KT DS+ LT E+LE A + GK+ +I P + LL
Sbjct: 179 DYKDDITLDGAIELALKTLSKTTDSSVLTHERLEFATISKDAEGKIYQKIYKPTEIATLL 238
Query: 149 E 149
E
Sbjct: 239 E 239
>gi|389636135|ref|XP_003715720.1| proteasome subunit alpha type-4 [Magnaporthe oryzae 70-15]
gi|59802961|gb|AAX07682.1| proteasome subunit alpha type 4-like protein [Magnaporthe grisea]
gi|351648053|gb|EHA55913.1| proteasome subunit alpha type-4 [Magnaporthe oryzae 70-15]
gi|440474788|gb|ELQ43511.1| proteasome component Y13 [Magnaporthe oryzae Y34]
gi|440490961|gb|ELQ70452.1| proteasome component Y13 [Magnaporthe oryzae P131]
Length = 251
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINFARQNAQRYLLTYNEDI 105
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D + +EA +A+KVL KTMDST L+SEK+E A V GKV +R+ S + +T L
Sbjct: 177 QDYKEDCSLKEACGMAVKVLSKTMDSTKLSSEKIEFATVGQTKDGKVYHRLWSADEITAL 236
Query: 148 LENFGVAQPAS 158
L+ +A+ S
Sbjct: 237 LKEHDLAKDDS 247
>gi|115400489|ref|XP_001215833.1| proteasome component Y13 [Aspergillus terreus NIH2624]
gi|114191499|gb|EAU33199.1| proteasome component Y13 [Aspergillus terreus NIH2624]
Length = 255
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAEKKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYTLNDNMICAVAGMTADANILINYARQAAQRYLLTYNEEI 105
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D +EA +A+KVL KTMDST L+SEK+E A V GKV + + + + + L
Sbjct: 177 QDYKEDCDLKEACAMAVKVLSKTMDSTKLSSEKIEFATVGKTAEGKVYHHLWNADEINAL 236
Query: 148 LENFGVAQ 155
L G+A+
Sbjct: 237 LREHGLAK 244
>gi|145244710|ref|XP_001394650.1| proteasome subunit alpha type-4 [Aspergillus niger CBS 513.88]
gi|134079340|emb|CAK96969.1| unnamed protein product [Aspergillus niger]
gi|350631407|gb|EHA19778.1| hypothetical protein ASPNIDRAFT_178388 [Aspergillus niger ATCC
1015]
Length = 255
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAEKKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYTLNDNMICAVAGMTADANILINYARQAAQRYLLTYNEEI 105
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D +EA +A+KVL KTMDST L+SEK+E A V P GK+ + + + + + L
Sbjct: 177 QDYKEDCDLKEACAMAVKVLSKTMDSTKLSSEKIEFATVGRTPEGKIYHHLWNADEINAL 236
Query: 148 LENFGVAQ 155
L+ G+A+
Sbjct: 237 LKEHGLAK 244
>gi|238501678|ref|XP_002382073.1| proteasome component Pre9, putative [Aspergillus flavus NRRL3357]
gi|220692310|gb|EED48657.1| proteasome component Pre9, putative [Aspergillus flavus NRRL3357]
gi|391863754|gb|EIT73053.1| 20S proteasome, regulatory subunit alpha type PSMA4/PRE9
[Aspergillus oryzae 3.042]
Length = 255
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAEKKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYTLNDNMICAVAGMTADANILINYARQAAQRYLLTYDEEI 105
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D +EA +A+KVL KTMDST L+SEK+E A V GKV + + + + + L
Sbjct: 177 QDYKEDCDLKEACAMAVKVLSKTMDSTKLSSEKIEFATVGKTQEGKVYHHLWNADEINAL 236
Query: 148 LENFGVAQ 155
L+ G+A+
Sbjct: 237 LKQHGLAK 244
>gi|340514403|gb|EGR44666.1| proteasome, subunit alpha type 4-like protein [Trichoderma reesei
QM6a]
Length = 251
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYVLNDNMICAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D T +EA +A+KVL KTMDST L+SEK+E A V GK+ +R+ S + +T L
Sbjct: 177 QDYKEDCTLKEACGVAVKVLSKTMDSTKLSSEKIEFATVGQTEDGKIYHRLWSADEITAL 236
Query: 148 LENFGVAQ 155
L+ +A+
Sbjct: 237 LKEHDLAK 244
>gi|400598337|gb|EJP66054.1| proteasome component Y13 [Beauveria bassiana ARSEF 2860]
Length = 251
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYVLNDNMICAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D T QEA +A+KVL KTMDST L+SEK+E A V GKV +R+ S + +T L
Sbjct: 177 QDYKEDCTLQEACAMAVKVLSKTMDSTKLSSEKIEFATVGKTEDGKVYHRLWSADEITAL 236
Query: 148 LENFGVAQ 155
L+ +A+
Sbjct: 237 LKEHDLAK 244
>gi|322694126|gb|EFY85964.1| proteasome component Y13 [Metarhizium acridum CQMa 102]
Length = 251
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYVLNDNMICAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D T +EA +A+KVL KTMDST L+SEK+E A V GK+ +R+ S + +T L
Sbjct: 177 QDYKEDCTLKEACAMAVKVLSKTMDSTKLSSEKIEFATVGQTEDGKIYHRLWSADEITAL 236
Query: 148 LENFGVAQ 155
L+ +A+
Sbjct: 237 LKEHDLAK 244
>gi|121699598|ref|XP_001268075.1| proteasome component Pre9, putative [Aspergillus clavatus NRRL 1]
gi|119396217|gb|EAW06649.1| proteasome component Pre9, putative [Aspergillus clavatus NRRL 1]
Length = 255
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAEKKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYTLNDNMICAVAGMTADANILINYARQAAQRYLLTYGEEI 105
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D +EA +A+KVL KTMDST L+SEK+E A V GK+ + + + + + L
Sbjct: 177 QDYKEDCDLKEACAMAVKVLSKTMDSTKLSSEKIEFATVGKTKEGKIYHHLWNADEINAL 236
Query: 148 LENFGVAQ 155
L+ G+A+
Sbjct: 237 LKEHGLAK 244
>gi|358395275|gb|EHK44662.1| hypothetical protein TRIATDRAFT_299605 [Trichoderma atroviride IMI
206040]
Length = 251
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYVLNDNMICAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 47/68 (69%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDY++D T +EA +A+KVL KTMDST L+SEK+E A V GK+ +++ S + +T L
Sbjct: 177 QDYQEDCTLKEACGVAVKVLSKTMDSTKLSSEKIEFATVGQTEDGKIYHKLWSADEITAL 236
Query: 148 LENFGVAQ 155
L+ +A+
Sbjct: 237 LKEHDLAK 244
>gi|358389239|gb|EHK26831.1| hypothetical protein TRIVIDRAFT_165883 [Trichoderma virens Gv29-8]
Length = 251
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYVLNDNMICAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D T +EA +A+KVL KTMDST L+SEK+E A V GK+ +R+ S + +T L
Sbjct: 177 QDYKEDCTLKEACGVAVKVLSKTMDSTKLSSEKIEFATVGQTEDGKIYHRLWSADEITAL 236
Query: 148 LENFGVAQ 155
L+ +A+
Sbjct: 237 LKEHDLAK 244
>gi|346327454|gb|EGX97050.1| proteasome component Y13 [Cordyceps militaris CM01]
Length = 251
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYVLNDNMICAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D T QEA +A+KVL KTMDST L+SEK+E A V GKV +R+ S + +T L
Sbjct: 177 QDYKEDCTLQEACAMAVKVLSKTMDSTKLSSEKIEFATVGKSEDGKVYHRLWSADEITAL 236
Query: 148 LENFGVAQ 155
L+ +A+
Sbjct: 237 LKEHDLAK 244
>gi|67522601|ref|XP_659361.1| hypothetical protein AN1757.2 [Aspergillus nidulans FGSC A4]
gi|40744887|gb|EAA64043.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259487101|tpe|CBF85505.1| TPA: proteasome component Pre9, putative (AFU_orthologue;
AFUA_6G08960) [Aspergillus nidulans FGSC A4]
Length = 255
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAEKKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYTLNDNMICAVAGMTADANILINYARQAAQRYLITYGEEI 105
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D +EA +A+KVL KTMDST L+SEK+E A V GK+ + + + + + L
Sbjct: 177 QDYKEDCDLKEACAMAVKVLSKTMDSTKLSSEKIEFATVGKTKEGKIYHHLWNADEINAL 236
Query: 148 LENFGVAQPASE 159
L+ G+A+ E
Sbjct: 237 LKEHGLAKVDDE 248
>gi|70991873|ref|XP_750785.1| proteasome component Pre9 [Aspergillus fumigatus Af293]
gi|119470082|ref|XP_001258013.1| proteasome component Pre9, putative [Neosartorya fischeri NRRL 181]
gi|66848418|gb|EAL88747.1| proteasome component Pre9, putative [Aspergillus fumigatus Af293]
gi|119406165|gb|EAW16116.1| proteasome component Pre9, putative [Neosartorya fischeri NRRL 181]
gi|159124347|gb|EDP49465.1| proteasome component Pre9, putative [Aspergillus fumigatus A1163]
Length = 255
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAEKKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYTLNDNMICAVAGMTADANILINYARQAAQRYLLTYGEEI 105
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D +EA +A+KVL KTMDST L+SEK+E A V GK+ + + + + + L
Sbjct: 177 QDYKEDCDLKEACAMAVKVLSKTMDSTKLSSEKIEFATVGKTKEGKIYHHLWNADEINAL 236
Query: 148 LENFGVAQ 155
L+ G+A+
Sbjct: 237 LKEHGLAK 244
>gi|322710739|gb|EFZ02313.1| proteasome component Y13 [Metarhizium anisopliae ARSEF 23]
Length = 251
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYVLNDNMICAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 47/68 (69%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D T +EA +A+KVL KTMDST L+SEK+E A V GK+ +R+ + + +T L
Sbjct: 177 QDYKEDCTLKEACAMAVKVLSKTMDSTKLSSEKIEFATVGQTEDGKIYHRLWNADEITAL 236
Query: 148 LENFGVAQ 155
L+ +A+
Sbjct: 237 LKEHDLAK 244
>gi|302890063|ref|XP_003043916.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256724835|gb|EEU38203.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 251
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D T +EA +A+KVL KTMDST L+SEK+E A V GK+ +R+ S + +T L
Sbjct: 177 QDYKEDCTLKEACGMAVKVLSKTMDSTKLSSEKIEFATVGQTEDGKIYHRLWSADEITAL 236
Query: 148 LENFGVAQ 155
L+ +A+
Sbjct: 237 LKEHDLAK 244
>gi|46121975|ref|XP_385541.1| hypothetical protein FG05365.1 [Gibberella zeae PH-1]
gi|342873109|gb|EGU75338.1| hypothetical protein FOXB_14148 [Fusarium oxysporum Fo5176]
gi|408391142|gb|EKJ70524.1| hypothetical protein FPSE_09277 [Fusarium pseudograminearum CS3096]
Length = 251
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D T +EA +A+KVL KTMDST L+SEK+E A V GK+ +R+ S + +T L
Sbjct: 177 QDYKEDCTLKEACGMAVKVLSKTMDSTKLSSEKIEFATVGQTEDGKIYHRLWSADEITAL 236
Query: 148 LENFGVAQ 155
L+ +A+
Sbjct: 237 LKEHDLAK 244
>gi|149240485|ref|XP_001526118.1| proteasome component Y13 [Lodderomyces elongisporus NRRL YB-4239]
gi|146450241|gb|EDK44497.1| proteasome component Y13 [Lodderomyces elongisporus NRRL YB-4239]
Length = 251
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 67/105 (63%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAQEAISMAGAAIGIVTSEGVVLACEKKVTSKLLDDDG 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y I+D + CAVAG+ +DA+IL+N ARVQA++Y Y E I
Sbjct: 61 SAEKLYIINDQMICAVAGMTADASILVNNARVQAQQYLKTYSEEI 105
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
+DYK+++T +E +LA+KVL KTMD+++L SEKLE A + L GKV +I S E++ L
Sbjct: 177 KDYKEELTLKEGCELAIKVLSKTMDASNLNSEKLEFATLSLDKEGKVLQKIWSDENIDSL 236
Query: 148 LENFGV 153
++ GV
Sbjct: 237 IKASGV 242
>gi|396475071|ref|XP_003839698.1| similar to proteasome subunit alpha type-4 [Leptosphaeria maculans
JN3]
gi|312216268|emb|CBX96219.1| similar to proteasome subunit alpha type-4 [Leptosphaeria maculans
JN3]
Length = 253
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK++ +EA LA+KVL KTMDST L+SEK+E A V +GK+ + + S + + L
Sbjct: 177 QDYKEECDLKEACGLAVKVLSKTMDSTKLSSEKIEFATVGKTKTGKIYHHLWSADEIDAL 236
Query: 148 LENFGVAQ 155
L+ G+A+
Sbjct: 237 LKEHGLAK 244
>gi|451851027|gb|EMD64328.1| hypothetical protein COCSADRAFT_142708 [Cochliobolus sativus
ND90Pr]
gi|451996312|gb|EMD88779.1| hypothetical protein COCHEDRAFT_1182097 [Cochliobolus
heterostrophus C5]
Length = 253
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK++ + +EA LA+KVL KTMDST L+SEK+E A V +GK+ + + + + L
Sbjct: 177 QDYKEECSLKEACGLAVKVLSKTMDSTKLSSEKIEFATVGKTKTGKIYHHLWGADEIDAL 236
Query: 148 LENFGVAQ 155
L+ G+A+
Sbjct: 237 LKEHGLAK 244
>gi|189201059|ref|XP_001936866.1| proteasome subunit alpha type-4 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330926491|ref|XP_003301480.1| hypothetical protein PTT_13000 [Pyrenophora teres f. teres 0-1]
gi|187983965|gb|EDU49453.1| proteasome subunit alpha type-4 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311323656|gb|EFQ90425.1| hypothetical protein PTT_13000 [Pyrenophora teres f. teres 0-1]
Length = 253
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK++ +EA LA+KVL KTMDST L+SEK+E A V +GK+ + + + + L
Sbjct: 177 QDYKEECDLKEACGLAVKVLSKTMDSTKLSSEKIEFATVGKTKTGKIYHHLWGADEIDAL 236
Query: 148 LENFGVAQ 155
L+ G+A+
Sbjct: 237 LKEHGLAK 244
>gi|348676338|gb|EGZ16156.1| hypothetical protein PHYSODRAFT_286443 [Phytophthora sojae]
Length = 250
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 65/103 (63%), Gaps = 18/103 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT FSPEGRL+QV+Y G VG E SKLL S
Sbjct: 1 MSRRYDGRTTTFSPEGRLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKKTVSKLLTPSK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
++EK K+DDH+ CAVAG+ SDANIL+N AR+ A+RY AYQE
Sbjct: 61 TSEKTIKLDDHLICAVAGLTSDANILVNYARLAAQRYELAYQE 103
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
DY++ MT +EA+ ++KV+ KTMDSTS ++EKLE V GK+ +R + + LL
Sbjct: 178 DYEEGMTVEEALAFSVKVMNKTMDSTSPSAEKLEFTTVTRNAEGKIVHRQLTQKETEELL 237
Query: 149 E 149
+
Sbjct: 238 Q 238
>gi|378731660|gb|EHY58119.1| proteasome subunit alpha type-4 [Exophiala dermatitidis NIH/UT8656]
Length = 251
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D +EA +A+KVL KTMDST L+SEK+E A V GK+ + + S + + L
Sbjct: 177 QDYKEDCDLKEACGMAVKVLSKTMDSTKLSSEKIEFATVGKTKDGKIYHHLWSGDEIMTL 236
Query: 148 LENFGVAQ 155
L+ G+A+
Sbjct: 237 LKEHGLAK 244
>gi|154274566|ref|XP_001538134.1| proteasome component Y13 [Ajellomyces capsulatus NAm1]
gi|150414574|gb|EDN09936.1| proteasome component Y13 [Ajellomyces capsulatus NAm1]
Length = 251
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEEI 105
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D +E +A+KVL KTMDST L+SEK+E A V G++ + + + + L
Sbjct: 177 QDYKEDCDLKEVCGMAVKVLSKTMDSTKLSSEKIEFATVGKTKDGQIYHHLWGADEIDAL 236
Query: 148 LENFGVAQPASE 159
L G+A+ A +
Sbjct: 237 LREHGLAKEADQ 248
>gi|240277965|gb|EER41472.1| proteasome component Y13 [Ajellomyces capsulatus H143]
Length = 264
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEEI 105
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D +EA +A+KVL KTMDST L+SEK+E A V G++ + + + + L
Sbjct: 177 QDYKEDCDLKEACGMAVKVLSKTMDSTKLSSEKIEFATVGKTKDGQIYHHLWGADEIDAL 236
Query: 148 LENFGVAQ 155
L G+A+
Sbjct: 237 LREHGLAR 244
>gi|225679093|gb|EEH17377.1| proteasome subunit alpha type-4 [Paracoccidioides brasiliensis
Pb03]
gi|226288109|gb|EEH43622.1| proteasome component Y13 [Paracoccidioides brasiliensis Pb18]
Length = 251
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEEI 105
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D +EA +A+KVL KTMDST L++EK+E A V G + + + + + L
Sbjct: 177 QDYKEDCDLKEACGMAVKVLSKTMDSTKLSAEKIEFATVGKTKDGTIYHHLWGADEINAL 236
Query: 148 LENFGVAQ 155
L G+A+
Sbjct: 237 LREHGLAK 244
>gi|325096025|gb|EGC49335.1| proteasome component [Ajellomyces capsulatus H88]
Length = 251
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEEI 105
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D +EA +A+KVL KTMDST L+SEK+E A V G++ + + + + L
Sbjct: 177 QDYKEDCDLKEACGMAVKVLSKTMDSTKLSSEKIEFATVGKTKDGQIYHHLWGADEIDAL 236
Query: 148 LENFGVAQPASE 159
L G+A+ A +
Sbjct: 237 LREHGLAKEADQ 248
>gi|295658654|ref|XP_002789887.1| proteasome subunit alpha type-4 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226282848|gb|EEH38414.1| proteasome subunit alpha type-4 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 251
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEEI 105
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D +EA +A+KVL KTMDST L++EK+E A V G + + + + + L
Sbjct: 177 QDYKEDCDLKEACGMAVKVLSKTMDSTKLSAEKIEFATVGKTKDGTIYHHLWGADEINAL 236
Query: 148 LENFGVAQPASE 159
L G+A+ +
Sbjct: 237 LREHGLAKEGDQ 248
>gi|261205276|ref|XP_002627375.1| proteasome component Y13 [Ajellomyces dermatitidis SLH14081]
gi|239592434|gb|EEQ75015.1| proteasome component Y13 [Ajellomyces dermatitidis SLH14081]
gi|239611407|gb|EEQ88394.1| proteasome component Y13 [Ajellomyces dermatitidis ER-3]
gi|327348583|gb|EGE77440.1| proteasome subunit alpha type [Ajellomyces dermatitidis ATCC 18188]
Length = 251
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEEI 105
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDY++D +EA +A+KVL KTMDST L+SEK+E A V G++ + + + + L
Sbjct: 177 QDYREDCDLKEACGMAVKVLSKTMDSTKLSSEKIEFATVGKTKEGQIYHHLWGADEIDAL 236
Query: 148 LENFGVAQPASE 159
L G+A+ A +
Sbjct: 237 LREHGLAKEADQ 248
>gi|347440672|emb|CCD33593.1| similar to proteasome subunit alpha type-4 [Botryotinia fuckeliana]
Length = 256
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D +EA +A+KVL KTMDST L+SEK+E A V G + + + + +T L
Sbjct: 177 QDYKEDCDLKEACGMAVKVLSKTMDSTKLSSEKIEFATVGKNKDGTIYHHLWGADEITTL 236
Query: 148 LENFGVAQ 155
L+ +A+
Sbjct: 237 LKEHDLAK 244
>gi|156042279|ref|XP_001587697.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154696073|gb|EDN95811.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 256
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D +EA +A+KVL KTMDST L+SEK+E A V G + + + + +T L
Sbjct: 177 QDYKEDCDLKEACGMAVKVLSKTMDSTKLSSEKIEFATVGKNKDGTIYHHLWGADEITTL 236
Query: 148 LENFGVAQ 155
L+ +A+
Sbjct: 237 LKEHDLAR 244
>gi|154298453|ref|XP_001549649.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
Length = 211
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEK 120
QDYK+D +EA +A+KVL KTMDST L+SEK
Sbjct: 177 QDYKEDCDLKEACGMAVKVLSKTMDSTKLSSEK 209
>gi|367029243|ref|XP_003663905.1| hypothetical protein MYCTH_2306141 [Myceliophthora thermophila ATCC
42464]
gi|347011175|gb|AEO58660.1| hypothetical protein MYCTH_2306141 [Myceliophthora thermophila ATCC
42464]
Length = 251
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSP+GRLYQV+Y G +G E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPDGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D T +EA +A+KVL KTMDST L+SEK+E A V GK+ +++ S E +T L
Sbjct: 177 QDYKEDCTLEEACGMAVKVLSKTMDSTKLSSEKIEFATVGQTKDGKIYHKLWSGEEITAL 236
Query: 148 LENFGVAQ 155
L+ +A+
Sbjct: 237 LKKHDLAK 244
>gi|367039687|ref|XP_003650224.1| hypothetical protein THITE_2109487 [Thielavia terrestris NRRL 8126]
gi|346997485|gb|AEO63888.1| hypothetical protein THITE_2109487 [Thielavia terrestris NRRL 8126]
Length = 251
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSP+GRLYQV+Y G +G E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPDGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D T +EA +A+KVL KTMDST L+SEK+E A V GK+ +++ S E +T L
Sbjct: 177 QDYKEDCTLKEACGMAVKVLSKTMDSTKLSSEKIEFATVGQTKEGKIYHKLWSAEEITAL 236
Query: 148 LENFGVAQ 155
L+ +A+
Sbjct: 237 LKEHDLAK 244
>gi|116203057|ref|XP_001227340.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88177931|gb|EAQ85399.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 251
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSP+GRLYQV+Y G +G E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPDGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D T +EA +A+KVL KTMDST L+SEK+E A V GK+ +++ S E +T L
Sbjct: 177 QDYKEDCTLKEACGMAVKVLSKTMDSTKLSSEKIEFATVGQTKDGKIYHKLWSAEEITAL 236
Query: 148 LENFGVAQ 155
L+ +A+
Sbjct: 237 LKEHDLAK 244
>gi|85091201|ref|XP_958786.1| proteasome component Y13 [Neurospora crassa OR74A]
gi|28920171|gb|EAA29550.1| proteasome component Y13 [Neurospora crassa OR74A]
gi|336466568|gb|EGO54733.1| proteasome component Y13 [Neurospora tetrasperma FGSC 2508]
gi|350286544|gb|EGZ67791.1| proteasome component Y13 [Neurospora tetrasperma FGSC 2509]
Length = 251
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ T
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D T +EA +A+KVL KTMDST L+ EK+E A V GK+ +R+ S + +T L
Sbjct: 177 QDYKEDCTLKEACAMAVKVLSKTMDSTKLSPEKIEFATVGQTKDGKIYHRLWSADEITAL 236
Query: 148 LENFGVAQ 155
L+ +A+
Sbjct: 237 LKEHDLAK 244
>gi|354547914|emb|CCE44649.1| hypothetical protein CPAR2_404530 [Candida parapsilosis]
Length = 252
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 67/105 (63%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAQEAISMAGTALGIVSSEGVVLACEKKVTSKLLDDDG 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y I+D + CAVAG+ SDA+IL+N ARVQ+++Y Y E I
Sbjct: 61 SAEKLYIINDQLICAVAGMTSDASILVNNARVQSQQYLKTYNEEI 105
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
+DYKDD+T +EA +LA+KVL KTMD+++L SEKLE A + L GKV +I S + + L
Sbjct: 177 KDYKDDLTLKEACELAIKVLSKTMDASNLNSEKLEFATLSLGKEGKVLRKIWSDKDIDAL 236
Query: 148 LENFGV 153
++ GV
Sbjct: 237 IQASGV 242
>gi|301122141|ref|XP_002908797.1| proteasome subunit alpha, putative [Phytophthora infestans T30-4]
gi|23394356|gb|AAN31468.1| proteasome subunit [Phytophthora infestans]
gi|262099559|gb|EEY57611.1| proteasome subunit alpha, putative [Phytophthora infestans T30-4]
Length = 250
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 65/103 (63%), Gaps = 18/103 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT FSPEGRL+QV+Y G VG E SKLL S
Sbjct: 1 MSRRYDGRTTTFSPEGRLFQVEYAMEAINNAGSAVGILAKDGIVIAAEKKTVSKLLTPSK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
++EK K+DDH+ CAVAG+ +DANIL+N AR+ A+RY AYQE
Sbjct: 61 TSEKTIKLDDHLICAVAGLTADANILVNYARLSAQRYELAYQE 103
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYR 137
DY++ MT +EA+ ++KV+ KTMDSTS ++EKLE V GK+ +R
Sbjct: 178 DYEEGMTVEEALAFSVKVMNKTMDSTSPSAEKLEFTTVTRNADGKIVHR 226
>gi|448522378|ref|XP_003868673.1| Pre9 alpha3 (C9) subunit of the 20S proteasome [Candida
orthopsilosis Co 90-125]
gi|380353013|emb|CCG25769.1| Pre9 alpha3 (C9) subunit of the 20S proteasome [Candida
orthopsilosis]
Length = 252
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 67/105 (63%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAQEAISMAGTALGIASSEGVVLACEKKVTSKLLDDDG 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y I+D + CAVAG+ SDA+IL+N ARVQ+++Y Y E I
Sbjct: 61 SAEKLYIINDQLICAVAGMTSDASILVNNARVQSQQYLKTYNEEI 105
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
+DYKDD+T ++A +LA+KVL KTMD+++L SEKLE A + L GKV +I S + + L
Sbjct: 177 KDYKDDLTLKDACELAIKVLSKTMDASNLNSEKLEFATLSLGKEGKVLRKIWSDKDIDAL 236
Query: 148 LENFGV 153
+E GV
Sbjct: 237 IEASGV 242
>gi|336268737|ref|XP_003349131.1| hypothetical protein SMAC_06967 [Sordaria macrospora k-hell]
gi|380089462|emb|CCC12560.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 251
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A++Y Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQKYLLTYNEDI 105
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D +EA +A+KVL KTMDST L+ EK+E A V GK+ +R+ S + +T L
Sbjct: 177 QDYKEDCNLKEACAMAVKVLSKTMDSTKLSPEKIEFATVGQTKDGKIYHRLWSADEITAL 236
Query: 148 LENFGVAQ 155
L+ +A+
Sbjct: 237 LKEHDLAK 244
>gi|171682782|ref|XP_001906334.1| hypothetical protein [Podospora anserina S mat+]
gi|170941350|emb|CAP67000.1| unnamed protein product [Podospora anserina S mat+]
Length = 250
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSP+GRLYQV+Y G +G E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPDGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D T +EA +A+KVL KTMDST L SEK+E A V GK+ +R+ S + + L
Sbjct: 177 QDYKEDCTLEEACGMAVKVLSKTMDSTKLGSEKIEFATVGQTKDGKIYHRLWSADEIDAL 236
Query: 148 LENFGVAQ 155
L+ +A+
Sbjct: 237 LKKHDLAK 244
>gi|119193923|ref|XP_001247565.1| proteasome component [Coccidioides immitis RS]
gi|392863194|gb|EAS36085.2| proteasome component [Coccidioides immitis RS]
Length = 251
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEEI 105
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDD +EA +A+KVL KTMDST L+SEK+E+A V GK+ + + + + L
Sbjct: 177 QDYKDDCDLKEACGMAVKVLSKTMDSTKLSSEKIEVATVGRTKDGKIYHHLWGADEIDAL 236
Query: 148 LENFGVAQPASEVS 161
L+ G+A+ + S
Sbjct: 237 LKEHGLAKDEEQQS 250
>gi|303274280|ref|XP_003056462.1| proteasome alpha-4 subunit [Micromonas pusilla CCMP1545]
gi|226462546|gb|EEH59838.1| proteasome alpha-4 subunit [Micromonas pusilla CCMP1545]
Length = 247
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 74/118 (62%), Gaps = 20/118 (16%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
M+RRYD TT FSP+GRL+QV+Y G VG E + SKLL+TS
Sbjct: 1 MARRYDSHTTTFSPDGRLFQVEYAMEAISHAGAAVGIRTDFGVVLAAEKKILSKLLETSE 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE--PIQDYKDDMTRQE 98
++EKM+K+D ++A AVAGI SDANILIN++R+ A+RYA Y E P++ M Q+
Sbjct: 61 ASEKMFKLDANIAVAVAGINSDANILINSSRLFAQRYALNYSEQVPVEHLVQSMCDQK 118
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 37/54 (68%), Gaps = 4/54 (7%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFL---LPSGKVKYRIC 139
+Y + ++ A QL+LKVL++TMDST L +K+EL+E+ +P G+V YR+
Sbjct: 178 EYVEGISLSTAKQLSLKVLKQTMDSTILIPDKVELSELAWQDGVP-GQVSYRLV 230
>gi|340915045|gb|EGS18386.1| hypothetical protein CTHT_0064110 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 251
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
M+RRYD +TT+FSP+GRLYQV+Y G +G E VTSKLL+ T
Sbjct: 1 MARRYDSRTTIFSPDGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y I+D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYVINDNMICAVAGMTADANILINFARQVAQRYLLTYNEDI 105
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 47/68 (69%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D T +EA LA+KVL KTMD+T L+S+K+E A V GK+ +++ S E +T L
Sbjct: 177 QDYKEDCTLEEACDLAVKVLSKTMDATKLSSDKIEFATVGKTKDGKIYHKLWSAEEITAL 236
Query: 148 LENFGVAQ 155
L+ +A+
Sbjct: 237 LKKHDLAK 244
>gi|303311685|ref|XP_003065854.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240105516|gb|EER23709.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320039756|gb|EFW21690.1| proteasome component [Coccidioides posadasii str. Silveira]
Length = 251
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEEI 105
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDD +EA +A+KVL KTMDST L+SEK+E+A V G + + + + + L
Sbjct: 177 QDYKDDCDLKEACGMAVKVLSKTMDSTKLSSEKIEVATVGRTKDGTIYHHLWGGDEIDAL 236
Query: 148 LENFGVAQ 155
L+ G+A+
Sbjct: 237 LKEHGLAK 244
>gi|242764570|ref|XP_002340801.1| proteasome component Pre9, putative [Talaromyces stipitatus ATCC
10500]
gi|218723997|gb|EED23414.1| proteasome component Pre9, putative [Talaromyces stipitatus ATCC
10500]
Length = 250
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAQDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A++Y Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQQYLLTYNEEI 105
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK++ +EA LA+KVL KTMDST L+SEK+E A V GK+ + + + + L
Sbjct: 177 QDYKEECDLKEACALAVKVLSKTMDSTKLSSEKIEFATVGKTKDGKIYHHLWGADEINAL 236
Query: 148 LENFGVAQ 155
L G+A+
Sbjct: 237 LRQHGLAK 244
>gi|320168981|gb|EFW45880.1| proteasome alpha 4 subunit [Capsaspora owczarzaki ATCC 30864]
Length = 283
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 70/104 (67%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCLVGEN-------NVTSKLLQTSTS 43
+ RYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ ++
Sbjct: 21 AHRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILTSEGIIIAAERRVTSKLLEQNSL 80
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++DH+A +VAGI +DANILIN R++A+RY ++ EPI
Sbjct: 81 SEKIYKLNDHMATSVAGITADANILINWMRLEAQRYMLSFHEPI 124
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 33/39 (84%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEV 126
QDYK+++T Q+A LA+KVL KT+DST+LTSEKLE A +
Sbjct: 196 QDYKEELTLQQAKLLAIKVLSKTLDSTTLTSEKLEFATI 234
>gi|296813891|ref|XP_002847283.1| proteasome subunit alpha type-4 [Arthroderma otae CBS 113480]
gi|238842539|gb|EEQ32201.1| proteasome subunit alpha type-4 [Arthroderma otae CBS 113480]
Length = 251
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEEI 105
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D +EA +A+KVL KTMDST L+SEK+E A V GK+ + + + + L
Sbjct: 177 QDYKEDCDLKEACGMAVKVLSKTMDSTKLSSEKIEFATVGKTKDGKIYHHLWGADEIDAL 236
Query: 148 LENFGVAQP 156
L+ +A+P
Sbjct: 237 LKEHDLAKP 245
>gi|241953109|ref|XP_002419276.1| proteasome subunit, putative [Candida dubliniensis CD36]
gi|223642616|emb|CAX42866.1| proteasome subunit, putative [Candida dubliniensis CD36]
Length = 251
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 67/105 (63%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAQEAISNAGTAIGILSSEGVVLACEKKVTSKLLDDDG 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y I+D + CAVAG+ +DA+IL+N AR+QA++Y Y E I
Sbjct: 61 SAEKLYIINDQMICAVAGMTADASILVNNARIQAQQYLKMYDEEI 105
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 48/66 (72%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
+DYKDD+T ++A +LA+KVL KTMD++++ SEKLE A + L KV ++I + + + +L
Sbjct: 177 KDYKDDLTLKDACELAIKVLSKTMDASNINSEKLEFATLSLGKDNKVLHKIWNDKDIDIL 236
Query: 148 LENFGV 153
++ GV
Sbjct: 237 IKASGV 242
>gi|302510154|ref|XP_003017037.1| hypothetical protein ARB_05331 [Arthroderma benhamiae CBS 112371]
gi|302654562|ref|XP_003019085.1| hypothetical protein TRV_06910 [Trichophyton verrucosum HKI 0517]
gi|315040688|ref|XP_003169721.1| proteasome subunit alpha type-4 [Arthroderma gypseum CBS 118893]
gi|291180607|gb|EFE36392.1| hypothetical protein ARB_05331 [Arthroderma benhamiae CBS 112371]
gi|291182782|gb|EFE38440.1| hypothetical protein TRV_06910 [Trichophyton verrucosum HKI 0517]
gi|311345683|gb|EFR04886.1| proteasome subunit alpha type-4 [Arthroderma gypseum CBS 118893]
gi|326475218|gb|EGD99227.1| proteasome subunit alpha [Trichophyton tonsurans CBS 112818]
gi|326479704|gb|EGE03714.1| proteasome component Y13 [Trichophyton equinum CBS 127.97]
Length = 251
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D +EA +A+KVL KTMDST L+S+K+E A V GK+ + + + + L
Sbjct: 177 QDYKEDCDLKEACGMAVKVLSKTMDSTKLSSKKIEFATVGKTKDGKIYHHLWGADEIDAL 236
Query: 148 LENFGVAQP 156
L+ +A+P
Sbjct: 237 LKEHDLAKP 245
>gi|327302430|ref|XP_003235907.1| proteasome subunit alpha [Trichophyton rubrum CBS 118892]
gi|326461249|gb|EGD86702.1| proteasome subunit alpha [Trichophyton rubrum CBS 118892]
Length = 251
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D +EA +A+KVL KTMDST L+S+K+E A V GK+ + + + + L
Sbjct: 177 QDYKEDCDLKEACGMAVKVLSKTMDSTKLSSKKIEFATVGKTKDGKIYHHLWGADEIDAL 236
Query: 148 LENFGVAQP 156
L +A+P
Sbjct: 237 LREHDLAKP 245
>gi|258575131|ref|XP_002541747.1| proteasome subunit alpha type 4 [Uncinocarpus reesii 1704]
gi|237902013|gb|EEP76414.1| proteasome subunit alpha type 4 [Uncinocarpus reesii 1704]
Length = 251
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEEI 105
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDD +EA +A+KVL KTMDST L+SEK+E+A V GK+ + + + + L
Sbjct: 177 QDYKDDCDLKEACGMAVKVLSKTMDSTKLSSEKIEVATVGRTKDGKIYHHLWGGDEIDAL 236
Query: 148 LENFGVAQPASE 159
L+ G+A+ A +
Sbjct: 237 LKEHGLAKDAEQ 248
>gi|406860899|gb|EKD13956.1| proteasome component Y13 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 257
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A++Y Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQKYLLTYNEDI 105
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D T +EA +A+KVL KTMDST L+SEK+E A V G++ + + + +T L
Sbjct: 177 QDYKEDCTLKEACAMAVKVLSKTMDSTKLSSEKIEFATVGKTKDGRIYHHLWGADEITTL 236
Query: 148 LENFGVAQPAS 158
L +A+ S
Sbjct: 237 LREHDLAKDES 247
>gi|212529064|ref|XP_002144689.1| proteasome component Pre9, putative [Talaromyces marneffei ATCC
18224]
gi|210074087|gb|EEA28174.1| proteasome component Pre9, putative [Talaromyces marneffei ATCC
18224]
Length = 250
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A++Y Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQQYLLTYNEEI 105
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK++ +EA LA+KVL KTMDST L+SEK+E A V GK+ + + + + L
Sbjct: 177 QDYKEECDLKEACALAVKVLSKTMDSTKLSSEKIEFATVGKTKDGKIYHHLWGADEINAL 236
Query: 148 LENFGVAQ 155
L G+A+
Sbjct: 237 LRQHGLAK 244
>gi|68471743|ref|XP_720178.1| hypothetical protein CaO19.7983 [Candida albicans SC5314]
gi|68472004|ref|XP_720045.1| hypothetical protein CaO19.350 [Candida albicans SC5314]
gi|46441895|gb|EAL01189.1| hypothetical protein CaO19.350 [Candida albicans SC5314]
gi|46442033|gb|EAL01326.1| hypothetical protein CaO19.7983 [Candida albicans SC5314]
gi|238880739|gb|EEQ44377.1| proteasome component Y13 [Candida albicans WO-1]
Length = 251
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 67/105 (63%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAQEAISNAGTAIGILSPEGVVLACEKKVTSKLLDDDG 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y I+D + CAVAG+ +DA+IL+N AR+QA++Y Y E I
Sbjct: 61 SAEKLYIINDQMICAVAGMTADASILVNNARIQAQQYLKLYDEEI 105
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 48/66 (72%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
+DYKDD+T ++A +LA+KVL KTMD++++ SEKLE A + L KV ++I + + + +L
Sbjct: 177 KDYKDDLTLKDACELAIKVLSKTMDASNINSEKLEFATLSLGKDNKVLHKIWNDKDIDIL 236
Query: 148 LENFGV 153
++ GV
Sbjct: 237 IKASGV 242
>gi|83286581|ref|XP_730225.1| proteasome subunit alpha type 4 [Plasmodium yoelii yoelii 17XNL]
gi|23489885|gb|EAA21790.1| proteasome subunit alpha type 4 [Plasmodium yoelii yoelii]
Length = 246
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 68/107 (63%), Gaps = 20/107 (18%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNV-TSKLLQTST 42
M+RRYD +TT FSPEGRLYQV+Y G ++G + V SKL+ +
Sbjct: 1 MARRYDSRTTTFSPEGRLYQVEYALEAINNASITIGIITNDGVILGADKVFISKLINKAN 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQ--EPI 87
+ EK+YKIDDH+ C VAG+ +DANILIN +R+ A+RY Y Y EP+
Sbjct: 61 NFEKIYKIDDHIFCGVAGLNADANILINQSRLYAQRYLYNYNDVEPV 107
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
Q++K DMT QE + LA+K L K+ DS EK+ELA
Sbjct: 177 QEWKKDMTLQEGLLLAIKTLAKSTDSEIPKCEKIELA 213
>gi|385303984|gb|EIF48023.1| proteasome component y13 [Dekkera bruxellensis AWRI1499]
Length = 252
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 67/105 (63%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAINHAGTAIGVLAEDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEKMY ++D++ CAVAG+ +DA ILIN R +A+RY Y + I
Sbjct: 61 SAEKMYVLNDNILCAVAGMTADAGILINYMREEAQRYLSVYNQDI 105
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKD + +A +LALKVL KT DS+ LTSEK+E A V L + +I P + L
Sbjct: 177 QDYKDGINLDDAKKLALKVLSKTTDSSKLTSEKVEFATV-QLTKXQPSLKIWKPAEIEKL 235
Query: 148 LENFGV 153
LE GV
Sbjct: 236 LEESGV 241
>gi|255726496|ref|XP_002548174.1| proteasome component Y13 [Candida tropicalis MYA-3404]
gi|240134098|gb|EER33653.1| proteasome component Y13 [Candida tropicalis MYA-3404]
Length = 251
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAQEAISNAGTAIGILSSEGVVLACEKKVTSKLLDDDG 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y I+D + CAVAG+ +DA+IL+N+ARV+A++Y Y E I
Sbjct: 61 SAEKLYIINDQMICAVAGMTADASILVNSARVRAQQYLKTYNEEI 105
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 50/66 (75%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
+DYKDDMT ++A +LA+KVL KTMD++++ SEKLE A + L +GKV ++I + + + +L
Sbjct: 177 KDYKDDMTLKDACELAIKVLSKTMDASNINSEKLEFATLSLGKNGKVLHKIWNDKDIDIL 236
Query: 148 LENFGV 153
++ GV
Sbjct: 237 IKASGV 242
>gi|14039743|gb|AAK53380.1|AF363673_1 20S proteasome subunit alpha 3, partial [Lolium perenne]
Length = 192
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRICSPESLTM 146
QDY+D MTR+EAV LALKVL KTMDSTSLT+EKLELAEVFL P +G+V+Y++C+P+++
Sbjct: 119 QDYRDGMTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLHPGTGEVQYQVCTPDAMGK 178
Query: 147 LLENFGVAQPASEV 160
LL G+ QPA E
Sbjct: 179 LLAKAGLTQPAPEA 192
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 43/47 (91%)
Query: 41 STSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S SAEKMYKID H+ACAVAGIMSDANILINTAR+ A+RY+ +YQEPI
Sbjct: 1 SRSAEKMYKIDSHLACAVAGIMSDANILINTARLHAQRYSLSYQEPI 47
>gi|68066270|ref|XP_675116.1| proteasome subunit [Plasmodium berghei strain ANKA]
gi|56494107|emb|CAI00054.1| proteasome subunit, putative [Plasmodium berghei]
Length = 246
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 68/107 (63%), Gaps = 20/107 (18%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNV-TSKLLQTST 42
M+RRYD +TT FSPEGRLYQV+Y G ++G + V SKL+ +
Sbjct: 1 MARRYDSRTTTFSPEGRLYQVEYALEAINNASITIGIITNGGVILGADKVFISKLINKAN 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQ--EPI 87
+ EK+YKIDDH+ C VAG+ +DANILIN +R+ A+RY Y Y EP+
Sbjct: 61 NFEKIYKIDDHIFCGVAGLNADANILINQSRLYAQRYLYNYNDVEPV 107
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
Q++K DMT QE + LA+K L K+ DS EK+ELA
Sbjct: 177 QEWKKDMTLQEGLLLAIKTLAKSTDSEIPKCEKIELA 213
>gi|361125155|gb|EHK97209.1| putative proteasome subunit alpha type-4 [Glarea lozoyensis 74030]
Length = 210
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A++Y Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQKYLLTYNEDI 105
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKL 121
QDYK+D +EA +A+KVL KTMDST L+SEK+
Sbjct: 177 QDYKEDCDLKEACGMAVKVLSKTMDSTKLSSEKI 210
>gi|452989755|gb|EME89510.1| hypothetical protein MYCFIDRAFT_63049 [Pseudocercospora fijiensis
CIRAD86]
Length = 252
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 67/105 (63%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILATDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNADI 105
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDY ++ T ++A +LA+KVL KTMDST L+SEK+E A V G + +++ + E + L
Sbjct: 177 QDYNEECTLKQACELAVKVLSKTMDSTKLSSEKIEFATVGRTEKGTIYHKLWAAEEIDAL 236
Query: 148 LENFGVAQPASE 159
L+ G+ + + E
Sbjct: 237 LKEHGLGKASEE 248
>gi|126133210|ref|XP_001383130.1| hypothetical protein PICST_81403 [Scheffersomyces stipitis CBS
6054]
gi|126094955|gb|ABN65101.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 253
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 66/105 (62%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAQEAISMAGTAIGILSTEGVVLACEKKVTSKLLDNDG 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y I+D++ CAVAG+ +DA+IL+N ARV A+ Y Y E I
Sbjct: 61 SAEKLYVINDNMICAVAGMTADASILVNNARVNAQSYLKTYNEEI 105
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFL--LPSGKVKYRICSPESLT 145
+DYKDD++ +EA +LA+KVL KTMDS++L SEKLE A + L + G+V ++I +
Sbjct: 177 KDYKDDLSLKEACELAIKVLSKTMDSSNLNSEKLEFATLSLSKINPGQVIHKIWKDSDID 236
Query: 146 MLLENFGV 153
L++ GV
Sbjct: 237 SLIKESGV 244
>gi|320590076|gb|EFX02521.1| proteasome component [Grosmannia clavigera kw1407]
Length = 251
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 67/105 (63%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNTDI 105
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D T +EA +A+KVL KTMDST L+SEK+E A V GK+ +R+ S + +T L
Sbjct: 177 QDYKEDCTLKEACGMAVKVLSKTMDSTKLSSEKIEFATVGQTKEGKIYHRLWSADDITSL 236
Query: 148 LENFGVAQPAS 158
L+ +A+ S
Sbjct: 237 LKEHDLAKDES 247
>gi|254581746|ref|XP_002496858.1| ZYRO0D09746p [Zygosaccharomyces rouxii]
gi|238939750|emb|CAR27925.1| ZYRO0D09746p [Zygosaccharomyces rouxii]
Length = 253
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 65/104 (62%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ TS
Sbjct: 3 SRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMAEDGIVLAAERKVTSKLLEQDTS 62
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
EK+Y+++D + AVAG+ SDA ILINTAR+ A+ Y Y E I
Sbjct: 63 TEKLYRLNDKIVVAVAGLTSDAEILINTARIHAQNYLKTYNEDI 106
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
DYKDD+ A++LALK L KT DS++LT +++E A + L +GK+ ++ PE + LL
Sbjct: 179 DYKDDIKVDGAIELALKTLSKTTDSSALTYDRVEFATIKLGENGKLYQKVFKPEEIQTLL 238
Query: 149 ENFGVAQPASE 159
G+ + +
Sbjct: 239 VKNGITKAGED 249
>gi|296419027|ref|XP_002839126.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635121|emb|CAZ83317.1| unnamed protein product [Tuber melanosporum]
Length = 249
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 67/105 (63%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGVLAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+ Y Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQNYLLTYNEDI 105
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D +EA +A+KVL KTMDST+L++EK+E A V SGKV + + S E + L
Sbjct: 177 QDYKEDCDLKEACAIAVKVLSKTMDSTTLSNEKIEFATVGKTESGKVHHHLWSAEEIQSL 236
Query: 148 LENFGVAQPASE 159
L G+A+ ++
Sbjct: 237 LREHGLAKEEAD 248
>gi|452847781|gb|EME49713.1| hypothetical protein DOTSEDRAFT_68478 [Dothistroma septosporum
NZE10]
Length = 264
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 67/105 (63%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILANDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNADI 105
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDY +D ++A +LA+KVL KTMDST L+SEK+E A V SG + + + + E + L
Sbjct: 177 QDYNEDCNLKQACELAVKVLSKTMDSTKLSSEKIEFATVGKTKSGTIYHHLWTAEEIDTL 236
Query: 148 LENFGVAQPASE 159
L+ G+A+ + E
Sbjct: 237 LKEHGLAKASDE 248
>gi|401625640|gb|EJS43639.1| pre9p [Saccharomyces arboricola H-6]
Length = 258
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 66/104 (63%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y G +G E VTS LL+ TS
Sbjct: 3 SRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTS 62
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
EK+YK++D +A AVAG+ +DA ILINTAR+ A+ Y +Y E I
Sbjct: 63 TEKLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKSYNEDI 106
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFL-LPSGKVKYRICSPESLTML 147
DYKDDM +A+ LALK L KT DS++LT ++LE A + + G+V +I P+ + L
Sbjct: 179 DYKDDMKVDDAIDLALKTLSKTTDSSALTYDRLEFATIRKGVNDGEVYQKIFKPQEIKDL 238
Query: 148 LENFGVAQ 155
L G+ +
Sbjct: 239 LVKTGITK 246
>gi|398404235|ref|XP_003853584.1| proteasome core particle subunit alpha 3 [Zymoseptoria tritici
IPO323]
gi|339473466|gb|EGP88560.1| hypothetical protein MYCGRDRAFT_104004 [Zymoseptoria tritici
IPO323]
Length = 251
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 67/105 (63%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILATDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNADI 105
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDY +D ++A +LA+KVL KTMDST L+SEK+E A V G + + + + + + L
Sbjct: 177 QDYNEDCNLKQACELAVKVLSKTMDSTKLSSEKIEFATVGRTEKGTIYHHLWAADEIDRL 236
Query: 148 LENFGVAQPASE 159
L++ G+ + A E
Sbjct: 237 LKDHGLGKAAEE 248
>gi|449303925|gb|EMC99932.1| hypothetical protein BAUCODRAFT_355760 [Baudoinia compniacensis
UAMH 10762]
Length = 268
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 67/105 (63%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGVLATDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNTDI 105
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDY ++ ++A +LA+KVL KTMDST L+SEK+E A V G + +R+ E + L
Sbjct: 177 QDYDENCDLRQACELAVKVLSKTMDSTKLSSEKIEFATVGKTKQGTIYHRLWGAEEIDAL 236
Query: 148 LENFGVAQPASE 159
L G+A+ SE
Sbjct: 237 LREHGLAKKESE 248
>gi|365760604|gb|EHN02314.1| Pre9p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 221
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 65/104 (62%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y G +G E VTS LL+ TS
Sbjct: 3 SRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTS 62
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
EK+YK++D +A AVAG+ +DA ILINTARV A+ Y Y E I
Sbjct: 63 TEKLYKLNDKIAVAVAGLTADAEILINTARVHAQNYLKTYNEDI 106
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEV 126
DYK+DM A+ LALK L KT DS++LT ++LE A +
Sbjct: 179 DYKEDMKVDGAIDLALKTLSKTTDSSALTYDRLEFATI 216
>gi|380490901|emb|CCF35697.1| proteasome subunit alpha type-4 [Colletotrichum higginsianum]
Length = 251
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 67/105 (63%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ AVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYIVNDNMLAAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D T +EA +A+KVL KTMDST L++EKLE A V GK+ +R+ + E + L
Sbjct: 177 QDYKEDCTLKEACGMAVKVLSKTMDSTKLSAEKLEFATVGQTSDGKIYHRLWTAEEIKEL 236
Query: 148 LENFGVAQPAS 158
L+ +A+ S
Sbjct: 237 LKEHDLAKEES 247
>gi|196013139|ref|XP_002116431.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190581022|gb|EDV21101.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 260
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 69/105 (65%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTST 42
MSRRYD +TT FSPEGRLYQV+Y G ++G E +T+KLL
Sbjct: 1 MSRRYDTKTTTFSPEGRLYQVEYAMEAIGLAGTCFGILAEDGIVLGAERKITNKLLDEIP 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K+YKI++++AC+VAGI SDAN+LIN R+ A+RY YQEPI
Sbjct: 61 FSDKIYKINENMACSVAGITSDANVLINELRLIAQRYLLNYQEPI 105
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
Q+YK+D+ +A+ L++KVL KT+D + L+ EK+E+A +GK R+ S E L L
Sbjct: 177 QEYKEDIKIDDALSLSMKVLHKTLDVSKLSPEKVEMA-TLTRKNGKTVIRVLSNEELNKL 235
Query: 148 LENF 151
+E++
Sbjct: 236 IEDY 239
>gi|223999683|ref|XP_002289514.1| 20S proteasome subunit PAC1 [Thalassiosira pseudonana CCMP1335]
gi|220974722|gb|EED93051.1| 20S proteasome subunit PAC1 [Thalassiosira pseudonana CCMP1335]
Length = 270
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 65/105 (61%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
M+RRYD TT FSPEGRL+QV+Y G VG E VTS LL +
Sbjct: 1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTSVGILARDGVVMASERKVTSGLLAPAR 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++EK YK+ H C VAG+ +DANILI+ AR++A RYAY YQEPI
Sbjct: 61 TSEKTYKLCPHATCTVAGLTADANILIDQARLRAGRYAYQYQEPI 105
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 98 EAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLLE 149
EA++LA+KVL KTMD +++KLEL + L G ++I + + ++++
Sbjct: 207 EALRLAVKVLNKTMDGAVASADKLELFTMSLDDQGNCVHKILNAKEAEVVIK 258
>gi|344301338|gb|EGW31650.1| hypothetical protein SPAPADRAFT_140464 [Spathaspora passalidarum
NRRL Y-27907]
Length = 253
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 66/105 (62%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAQEAISMAGTAIGILSSEGVVLACEKKVTSKLLDNDG 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y I+D++ CAVAG+ +DA+IL+N AR+ A+ Y Y E I
Sbjct: 61 SAEKLYIINDNMICAVAGMTADASILVNNARINAQSYLKTYNEQI 105
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFL--LPSGKVKYRICSPESLT 145
+DYKDD+T +EA +LA+KVL KTMD++++ SEKLE A + L + GKV ++I + +
Sbjct: 177 KDYKDDLTLKEACELAIKVLSKTMDASNINSEKLEFATLSLSKVEEGKVIHKIWNDTDVN 236
Query: 146 MLLENFGVAQPAS 158
L+++ GV S
Sbjct: 237 ALIQDSGVLNDKS 249
>gi|398365831|ref|NP_011651.3| proteasome core particle subunit alpha 3 [Saccharomyces cerevisiae
S288c]
gi|130875|sp|P23638.1|PSA3_YEAST RecName: Full=Proteasome subunit alpha type-3; AltName:
Full=Macropain subunit Y13; AltName: Full=Multicatalytic
endopeptidase complex subunit Y13; AltName:
Full=Proteasome component Y13; AltName: Full=Proteinase
YSCE subunit 13
gi|75765701|pdb|1Z7Q|C Chain C, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765715|pdb|1Z7Q|Q Chain Q, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|178847461|pdb|2ZCY|B Chain B, Yeast 20s Proteasome:syringolin A-Complex
gi|178847475|pdb|2ZCY|P Chain P, Yeast 20s Proteasome:syringolin A-Complex
gi|178847503|pdb|3BDM|B Chain B, Yeast 20s Proteasome:glidobactin A-Complex
gi|178847517|pdb|3BDM|P Chain P, Yeast 20s Proteasome:glidobactin A-Complex
gi|323462937|pdb|3NZJ|B Chain B, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462951|pdb|3NZJ|P Chain P, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462965|pdb|3NZW|B Chain B, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462979|pdb|3NZW|P Chain P, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462993|pdb|3NZX|B Chain B, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|323463007|pdb|3NZX|P Chain P, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|378792242|pdb|3UN4|B Chain B, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792256|pdb|3UN4|P Chain P, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792276|pdb|3UN8|B Chain B, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|378792290|pdb|3UN8|P Chain P, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|403071963|pdb|4B4T|C Chain C, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
gi|403072193|pdb|4G4S|C Chain C, Structure Of Proteasome-Pba1-Pba2 Complex
gi|444302340|pdb|4INR|B Chain B, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302354|pdb|4INR|P Chain P, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302368|pdb|4INT|B Chain B, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302382|pdb|4INT|P Chain P, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302396|pdb|4INU|B Chain B, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|444302410|pdb|4INU|P Chain P, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|172262|gb|AAA34907.1| proteasome Y13 [Saccharomyces cerevisiae]
gi|506480|emb|CAA40054.1| proteasome Y13 subunit [Saccharomyces cerevisiae]
gi|1323225|emb|CAA97148.1| PRE9 [Saccharomyces cerevisiae]
gi|151943415|gb|EDN61726.1| proteasome component Y13 [Saccharomyces cerevisiae YJM789]
gi|190406847|gb|EDV10114.1| proteasome component Y13 [Saccharomyces cerevisiae RM11-1a]
gi|207345073|gb|EDZ72012.1| YGR135Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270347|gb|EEU05553.1| Pre9p [Saccharomyces cerevisiae JAY291]
gi|285812328|tpg|DAA08228.1| TPA: proteasome core particle subunit alpha 3 [Saccharomyces
cerevisiae S288c]
gi|323304876|gb|EGA58634.1| Pre9p [Saccharomyces cerevisiae FostersB]
gi|323308999|gb|EGA62229.1| Pre9p [Saccharomyces cerevisiae FostersO]
gi|323354824|gb|EGA86657.1| Pre9p [Saccharomyces cerevisiae VL3]
gi|349578344|dbj|GAA23510.1| K7_Pre9p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299391|gb|EIW10485.1| Pre9p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 258
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 65/104 (62%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y G +G E VTS LL+ TS
Sbjct: 3 SRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTS 62
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
EK+YK++D +A AVAG+ +DA ILINTAR+ A+ Y Y E I
Sbjct: 63 TEKLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKTYNEDI 106
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPS-GKVKYRICSPESLTML 147
DYKDDM +A++LALK L KT DS++LT ++LE A + + G+V +I P+ + +
Sbjct: 179 DYKDDMKVDDAIELALKTLSKTTDSSALTYDRLEFATIRKGANDGEVYQKIFKPQEIKDI 238
Query: 148 LENFGVAQ 155
L G+ +
Sbjct: 239 LVKTGITK 246
>gi|310795927|gb|EFQ31388.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
Length = 251
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 67/105 (63%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ AVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYIVNDNMLAAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D T +EA +A+KVL KTMDST L++EKLE A V GK+ +R+ + E + L
Sbjct: 177 QDYKEDCTLKEACGMAVKVLSKTMDSTKLSAEKLEFATVGQTSDGKIYHRLWTAEEIKEL 236
Query: 148 LENFGVAQPAS 158
L+ +A+ S
Sbjct: 237 LKEHDLAKDES 247
>gi|429852095|gb|ELA27246.1| proteasome subunit alpha type-4 [Colletotrichum gloeosporioides
Nara gc5]
Length = 251
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 67/105 (63%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ AVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 SAEKLYIVNDNMLAAVAGMTADANILINYARQAAQRYLLTYNEDI 105
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D T +EA +A+KVL KTMDST L++EKLE A V GK+ +R+ + E + L
Sbjct: 177 QDYKEDCTLKEACGMAVKVLSKTMDSTKLSAEKLEFATVGQTEDGKIYHRLWTAEEIKEL 236
Query: 148 LENFGVAQPAS 158
L+ +A+ S
Sbjct: 237 LKEHDLAKDES 247
>gi|320581587|gb|EFW95807.1| Alpha 3 subunit of the 20S proteasome [Ogataea parapolymorpha DL-1]
Length = 252
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 65/105 (61%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAINHAGTAIGVMAKDGVVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEKMY ++D CAVAG+ +DA ILIN+ R A++Y Y E I
Sbjct: 61 SAEKMYVLNDKTVCAVAGMTADAGILINSIRYSAQQYLKTYGEDI 105
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 46/66 (69%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKD MT +EA LALKVL KT DS LTSEK+E + + L +GK++ RI +PE + L
Sbjct: 177 QDYKDGMTLEEAQNLALKVLSKTTDSNKLTSEKVEFSTIGLDANGKLQLRIWTPEQIEKL 236
Query: 148 LENFGV 153
L+ GV
Sbjct: 237 LKESGV 242
>gi|11513993|pdb|1G0U|B Chain B, A Gated Channel Into The Proteasome Core Particle
gi|11514007|pdb|1G0U|P Chain P, A Gated Channel Into The Proteasome Core Particle
gi|14488807|pdb|1FNT|C Chain C, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|14488821|pdb|1FNT|Q Chain Q, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|333361173|pdb|3MG6|B Chain B, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361187|pdb|3MG6|P Chain P, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361201|pdb|3MG7|B Chain B, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361215|pdb|3MG7|P Chain P, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361229|pdb|3MG8|B Chain B, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|333361243|pdb|3MG8|P Chain P, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
Length = 245
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 65/104 (62%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y G +G E VTS LL+ TS
Sbjct: 3 SRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTS 62
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
EK+YK++D +A AVAG+ +DA ILINTAR+ A+ Y Y E I
Sbjct: 63 TEKLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKTYNEDI 106
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPS-GKVKYRICSPESLTML 147
DYKDDM +A++LALK L KT DS++LT ++LE A + + G+V +I P+ + +
Sbjct: 179 DYKDDMKVDDAIELALKTLSKTTDSSALTYDRLEFATIRKGANDGEVYQKIFKPQEIKDI 238
Query: 148 LENFGV 153
L G+
Sbjct: 239 LVKTGI 244
>gi|260951467|ref|XP_002620030.1| hypothetical protein CLUG_01189 [Clavispora lusitaniae ATCC 42720]
gi|238847602|gb|EEQ37066.1| hypothetical protein CLUG_01189 [Clavispora lusitaniae ATCC 42720]
Length = 248
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E V SKLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAQEAISNAGTAIGILSAEGVVLACETKVISKLLDNDG 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y I+D + CAVAG+ +DA IL+N ARV A+RY Y E I
Sbjct: 61 SAEKLYVINDQMMCAVAGMTADATILVNNARVTAQRYLKTYNEEI 105
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
+DYKDDM+ EA +LA+KVL KTMDS +L S+KLE A + G ++ ++ + + L
Sbjct: 177 KDYKDDMSLSEACELAVKVLSKTMDSANLNSDKLEFATLSKGDHGVIR-KVWADAEIDAL 235
Query: 148 LENFGV 153
+++ GV
Sbjct: 236 VKSSGV 241
>gi|363748150|ref|XP_003644293.1| hypothetical protein Ecym_1230 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887925|gb|AET37476.1| hypothetical protein Ecym_1230 [Eremothecium cymbalariae
DBVPG#7215]
Length = 251
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 67/104 (64%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ TS
Sbjct: 3 SRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMAKDGIVLAAERKVTSKLLEQDTS 62
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+Y+++D++ AVAG+ +DA ILINTAR+ A+ Y Y E I
Sbjct: 63 SEKLYRLNDNITVAVAGLTADAEILINTARLHAQNYLKMYNEEI 106
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
DYKD++T + A++LALK L KT D++SLT ++LE A + +GK+ +I P + LL
Sbjct: 179 DYKDEITFENAIELALKTLSKTTDNSSLTDDRLEFATIKQDSNGKLVQKIYKPSEIKELL 238
Query: 149 ENFGV 153
+ G+
Sbjct: 239 QKSGI 243
>gi|3114271|pdb|1RYP|C Chain C, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|3114285|pdb|1RYP|Q Chain Q, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|11513414|pdb|1G65|B Chain B, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11513428|pdb|1G65|P Chain P, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|20150378|pdb|1JD2|B Chain B, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|20150399|pdb|1JD2|W Chain W, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|93279369|pdb|2F16|B Chain B, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279383|pdb|2F16|P Chain P, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|99032203|pdb|2FAK|B Chain B, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|99032217|pdb|2FAK|P Chain P, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|112490844|pdb|2GPL|B Chain B, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|112490858|pdb|2GPL|P Chain P, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|190016368|pdb|3D29|B Chain B, Proteasome Inhibition By Fellutamide B
gi|190016382|pdb|3D29|P Chain P, Proteasome Inhibition By Fellutamide B
gi|197725322|pdb|3E47|B Chain B, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|197725336|pdb|3E47|P Chain P, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|211939213|pdb|3DY3|B Chain B, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939227|pdb|3DY3|P Chain P, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939241|pdb|3DY4|B Chain B, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|211939255|pdb|3DY4|P Chain P, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|238828238|pdb|3GPJ|B Chain B, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|238828252|pdb|3GPJ|P Chain P, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|258588322|pdb|3GPT|B Chain B, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588336|pdb|3GPT|P Chain P, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588350|pdb|3GPW|B Chain B, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588364|pdb|3GPW|P Chain P, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588544|pdb|3HYE|B Chain B, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|258588558|pdb|3HYE|P Chain P, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|330689382|pdb|3MG4|B Chain B, Structure Of Yeast 20s Proteasome With Compound 1
gi|330689396|pdb|3MG4|P Chain P, Structure Of Yeast 20s Proteasome With Compound 1
gi|333361145|pdb|3MG0|B Chain B, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361159|pdb|3MG0|P Chain P, Structure Of Yeast 20s Proteasome With Bortezomib
gi|335892342|pdb|3OKJ|B Chain B, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|335892356|pdb|3OKJ|P Chain P, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|350610673|pdb|3TDD|B Chain B, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|350610687|pdb|3TDD|P Chain P, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|359545847|pdb|3SHJ|B Chain B, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|359545861|pdb|3SHJ|P Chain P, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|402550733|pdb|4GK7|B Chain B, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|402550747|pdb|4GK7|P Chain P, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|409973861|pdb|4FZC|B Chain B, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973875|pdb|4FZC|P Chain P, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973889|pdb|4FZG|B Chain B, 20s Yeast Proteasome In Complex With Glidobactin
gi|409973903|pdb|4FZG|P Chain P, 20s Yeast Proteasome In Complex With Glidobactin
Length = 244
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 65/104 (62%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y G +G E VTS LL+ TS
Sbjct: 2 SRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTS 61
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
EK+YK++D +A AVAG+ +DA ILINTAR+ A+ Y Y E I
Sbjct: 62 TEKLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKTYNEDI 105
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPS-GKVKYRICSPESLTML 147
DYKDDM +A++LALK L KT DS++LT ++LE A + + G+V +I P+ + +
Sbjct: 178 DYKDDMKVDDAIELALKTLSKTTDSSALTYDRLEFATIRKGANDGEVYQKIFKPQEIKDI 237
Query: 148 LENFGV 153
L G+
Sbjct: 238 LVKTGI 243
>gi|169618195|ref|XP_001802511.1| hypothetical protein SNOG_12286 [Phaeosphaeria nodorum SN15]
gi|160703572|gb|EAT80099.2| hypothetical protein SNOG_12286 [Phaeosphaeria nodorum SN15]
Length = 259
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 69/111 (62%), Gaps = 24/111 (21%)
Query: 1 MSRRYD------RQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSK 36
MSRRYD +QTT+FSPEGRLYQV+Y +G L E VTSK
Sbjct: 1 MSRRYDSRVTNSKQTTIFSPEGRLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSK 60
Query: 37 LLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
LL+ TSAEK+Y ++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 61 LLEQDTSAEKLYILNDNMICAVAGMTADANILINYARQAAQRYLLTYNEDI 111
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 47/69 (68%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK++ +EA LA+KVL KTMDST L+SEK+E A V +GK+ + + S + + L
Sbjct: 183 QDYKEECDLKEACGLAVKVLSKTMDSTKLSSEKIEFATVGKTKAGKIYHHLWSADEIDAL 242
Query: 148 LENFGVAQP 156
L+ G+A+P
Sbjct: 243 LKEHGLAKP 251
>gi|403223593|dbj|BAM41723.1| proteasome component [Theileria orientalis strain Shintoku]
Length = 457
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 66/104 (63%), Gaps = 18/104 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-------------MGC-----LVGENNVTSKLLQTST 42
MSRRYD +TT FSPEGRLYQV+Y + C LV + ++SKLL
Sbjct: 1 MSRRYDSRTTTFSPEGRLYQVEYALEAINNASLTVGVLCNSGVVLVADKPISSKLLDPGK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
EK+YK+D H+ CAVAG+ +DAN+LIN ++ A+R+ Y+Y EP
Sbjct: 61 INEKLYKLDSHIFCAVAGLTADANVLINMCKLYAQRHRYSYGEP 104
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 30/37 (81%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
Q++KDD+T +A++LA++VL K MDS++ ++K+E+
Sbjct: 177 QEWKDDLTLDQAIKLAIRVLTKAMDSSTPQADKIEVG 213
>gi|254573664|ref|XP_002493941.1| Alpha 3 subunit of the 20S proteasome, the only nonessential 20S
subunit [Komagataella pastoris GS115]
gi|238033740|emb|CAY71762.1| Alpha 3 subunit of the 20S proteasome, the only nonessential 20S
subunit [Komagataella pastoris GS115]
Length = 252
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 66/105 (62%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ +
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGVLANDGVVLAAEKKVTSKLLEQDS 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEKMY ++D++ CAVAG+ +DA ILIN R+ A+ Y Y E I
Sbjct: 61 SAEKMYILNDNMICAVAGMTADAGILINNVRITAQGYLKTYNENI 105
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 47/68 (69%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D+ +EA LALKVL KTMDS+SLTSEK+E A + +G + +RI PE + L
Sbjct: 177 QDYKNDINLEEAKNLALKVLSKTMDSSSLTSEKIEFATITKNSNGNIVHRIWKPEQIDQL 236
Query: 148 LENFGVAQ 155
L + G+ +
Sbjct: 237 LHDSGLVE 244
>gi|328354240|emb|CCA40637.1| 20S proteasome subunit alpha 3 [Komagataella pastoris CBS 7435]
Length = 288
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 66/105 (62%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ +
Sbjct: 37 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGVLANDGVVLAAEKKVTSKLLEQDS 96
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEKMY ++D++ CAVAG+ +DA ILIN R+ A+ Y Y E I
Sbjct: 97 SAEKMYILNDNMICAVAGMTADAGILINNVRITAQGYLKTYNENI 141
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 47/68 (69%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D+ +EA LALKVL KTMDS+SLTSEK+E A + +G + +RI PE + L
Sbjct: 213 QDYKNDINLEEAKNLALKVLSKTMDSSSLTSEKIEFATITKNSNGNIVHRIWKPEQIDQL 272
Query: 148 LENFGVAQ 155
L + G+ +
Sbjct: 273 LHDSGLVE 280
>gi|448116740|ref|XP_004203095.1| Piso0_000693 [Millerozyma farinosa CBS 7064]
gi|359383963|emb|CCE78667.1| Piso0_000693 [Millerozyma farinosa CBS 7064]
Length = 250
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 69/105 (65%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAQEAISQAGTAIGILSTEGVVLACEKKVTSKLLDDDG 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y+I+D++ CAVAG+ +DA+IL+N+AR+ A++Y Y E I
Sbjct: 61 SAEKIYEINDNMICAVAGMNADASILVNSARLYAQQYLKTYNEDI 105
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 33/41 (80%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFL 128
+DYKDDM+ +EA +LA+KVL KT+DS++L EKLE A + L
Sbjct: 177 KDYKDDMSLKEACELAMKVLSKTIDSSNLKGEKLEFATLSL 217
>gi|71029642|ref|XP_764464.1| proteasome subunit alpha type [Theileria parva strain Muguga]
gi|68351418|gb|EAN32181.1| proteasome subunit alpha type, putative [Theileria parva]
Length = 254
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 66/104 (63%), Gaps = 18/104 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTST 42
MSRRYD +TT FSPEGRLYQV+Y +G L V + ++SKLL
Sbjct: 1 MSRRYDSRTTTFSPEGRLYQVEYALEAINNASLTVGVLCSSGVVLVADKPISSKLLDPGK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
EK+YK+D H+ CAVAG+ +DAN+LIN ++ A+R+ Y+Y EP
Sbjct: 61 INEKLYKLDSHIFCAVAGLTADANVLINMCKLYAQRHRYSYGEP 104
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 31/37 (83%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
Q++K+D+T ++AV+LA++VL K MDS++ ++K+E+
Sbjct: 177 QEWKEDLTLEQAVRLAIRVLTKAMDSSTPQADKIEVG 213
>gi|84997473|ref|XP_953458.1| proteasome subunit [Theileria annulata strain Ankara]
gi|65304454|emb|CAI76833.1| proteasome subunit, putative [Theileria annulata]
Length = 254
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 66/104 (63%), Gaps = 18/104 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTST 42
MSRRYD +TT FSPEGRLYQV+Y +G L V + ++SKLL
Sbjct: 1 MSRRYDSRTTTFSPEGRLYQVEYALEAINNASLTVGVLCNSGVVLVADKPISSKLLDPGK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
EK+YK+D H+ CAVAG+ +DAN+LIN ++ A+R+ Y+Y EP
Sbjct: 61 INEKLYKLDSHIFCAVAGLTADANVLINMCKLYAQRHRYSYGEP 104
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 31/37 (83%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
Q++K+D+T ++A++LA++VL K MDS++ ++K+E+
Sbjct: 177 QEWKEDLTLEQAIKLAIRVLTKAMDSSTPQADKIEVG 213
>gi|345560273|gb|EGX43398.1| hypothetical protein AOL_s00215g134 [Arthrobotrys oligospora ATCC
24927]
Length = 250
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 67/105 (63%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ +
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILATDGIVLAAERKVTSKLLEQDS 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DANILIN AR A+ Y Y E I
Sbjct: 61 SAEKLYILNDNMICAVAGMTADANILINYARQTAQNYLRTYDEEI 105
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D +EA ++A+KVL +TMDST+L+SEKLE A V GK+ I S E + +L
Sbjct: 177 QDYKEDCNLEEACEIAVKVLSRTMDSTTLSSEKLEFATVG-QRDGKIFLNIWSAEEIDVL 235
Query: 148 LENFGVAQ 155
L+ G+ +
Sbjct: 236 LKKHGLGK 243
>gi|213402603|ref|XP_002172074.1| 20S proteasome component alpha 3 [Schizosaccharomyces japonicus
yFS275]
gi|212000121|gb|EEB05781.1| 20S proteasome component alpha 3 [Schizosaccharomyces japonicus
yFS275]
Length = 247
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 65/105 (61%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTST 42
MSR YD +TT+FSPEGRLYQV+Y MG L E VTSKLL+ T
Sbjct: 1 MSRSYDSRTTIFSPEGRLYQVEYALEAINHAGVAMGIVSKDGIILAAEKKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S+EK+Y + DH+ CAVAG+ +DANILIN AR ++Y Y E I
Sbjct: 61 SSEKLYVLSDHMICAVAGLTADANILINYARRVGQQYLQTYNEDI 105
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 42/62 (67%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDDM + A LA+K+L K++DST+L++EK+E+A + + KV Y+ + + L
Sbjct: 177 QDYKDDMDMKAACDLAVKILSKSIDSTNLSAEKIEIATIVKNENDKVVYKTWNATEIDEL 236
Query: 148 LE 149
L+
Sbjct: 237 LK 238
>gi|45198836|ref|NP_985865.1| AFR318Wp [Ashbya gossypii ATCC 10895]
gi|44984865|gb|AAS53689.1| AFR318Wp [Ashbya gossypii ATCC 10895]
gi|374109096|gb|AEY98002.1| FAFR318Wp [Ashbya gossypii FDAG1]
Length = 251
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 67/104 (64%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ TS
Sbjct: 3 SRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMAKDGIVLAAERKVTSKLLEQDTS 62
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+Y+++D++ AVAG+ +DA IL+NTAR+ A+ Y Y E I
Sbjct: 63 SEKLYRLNDNITVAVAGLTADAEILVNTARLHAQNYLKMYNEEI 106
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
DYKDD+T +A++LALK L KT DS+SL+ E+LE A + GKV +I + LL
Sbjct: 179 DYKDDLTFDDAIKLALKTLSKTTDSSSLSHERLEFATIQRNADGKVVQKIYKLGEIKDLL 238
Query: 149 ENFGV 153
E G+
Sbjct: 239 EKTGI 243
>gi|326526665|dbj|BAK00721.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 263
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 67/105 (63%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E T+KLL +
Sbjct: 1 MSRRYDTRTTIFSPEGRLYQVEYALEAISHAGTSLGILASDGILLAAEKRNTNKLLDEVS 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D + C+V+GI SDAN+LIN R+ A+RY YQEPI
Sbjct: 61 YSEKIYKLNDDLCCSVSGITSDANVLINELRLIAQRYFLQYQEPI 105
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Query: 88 QDYKDDMTR-QEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
Q+YK D T+ +A++LA+K+L KT+D+T LTS+K+E+A + K + RI + + L +
Sbjct: 177 QEYKIDETKLTDALRLAIKILSKTLDTTKLTSDKIEIA-TLTRENDKTRIRILTEQELNV 235
Query: 147 LLENF 151
L++ +
Sbjct: 236 LIKEY 240
>gi|410077497|ref|XP_003956330.1| hypothetical protein KAFR_0C02020 [Kazachstania africana CBS 2517]
gi|372462914|emb|CCF57195.1| hypothetical protein KAFR_0C02020 [Kazachstania africana CBS 2517]
Length = 258
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 64/104 (61%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y G +G E VTS LL+ TS
Sbjct: 3 SRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMAKDGIVLAAERKVTSALLEQDTS 62
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
EK+YK++D + AVAG+ +DA ILINTAR+ A+ Y Y E I
Sbjct: 63 VEKLYKLNDKITVAVAGLTADAEILINTARIHAQNYLKTYNEDI 106
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSG-KVKYRICSPESLTML 147
DYKD++T +A++LALK L K DS++LT ++LE A + + K+ +I +P+ + L
Sbjct: 179 DYKDEITLDDAMELALKTLSKVTDSSTLTYDRLEFATIKKGKTNDKIYQKIFTPDEIKSL 238
Query: 148 LENFGVAQPASE 159
L G+++ +E
Sbjct: 239 LVKTGISKKENE 250
>gi|366998683|ref|XP_003684078.1| hypothetical protein TPHA_0A05700 [Tetrapisispora phaffii CBS 4417]
gi|357522373|emb|CCE61644.1| hypothetical protein TPHA_0A05700 [Tetrapisispora phaffii CBS 4417]
Length = 256
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 65/104 (62%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y G +G E VTS LL+ TS
Sbjct: 3 SRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMAEDGIVLAAERKVTSTLLEQDTS 62
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
EK+YK++D++ AVAG+ +DA ILINTARV A+ Y Y E I
Sbjct: 63 TEKLYKLNDNITVAVAGLTADAEILINTARVFAQNYLQTYNEDI 106
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
++KDD+ + A++LALK L KT DS++LT +++E A + + KV +I PE + LL
Sbjct: 179 EFKDDIKLEGAIELALKTLSKTTDSSALTYDRVEFATIKKGENNKVYQKIYKPEEIKQLL 238
Query: 149 ENFGVAQPASE 159
G+ + + +
Sbjct: 239 SKAGITKKSED 249
>gi|367013724|ref|XP_003681362.1| hypothetical protein TDEL_0D05670 [Torulaspora delbrueckii]
gi|359749022|emb|CCE92151.1| hypothetical protein TDEL_0D05670 [Torulaspora delbrueckii]
Length = 255
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 65/104 (62%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ TS
Sbjct: 3 SRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMATDGIVLAAERKVTSKLLEQDTS 62
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
EK+Y+++D + AVAG+ +DA ILINTARV A+ Y Y E I
Sbjct: 63 TEKLYRLNDKITVAVAGLTADAEILINTARVYAQNYLRTYNEDI 106
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
DYKDD+ + A++LALK L KT DS++LT++++E A + P GK+ +I PE + LL
Sbjct: 179 DYKDDVKLEGAIELALKTLSKTTDSSALTNDRIEFATIQKAPDGKLYQKIFKPEEIQSLL 238
Query: 149 ENFGVAQ 155
G+ +
Sbjct: 239 VKHGITK 245
>gi|397612435|gb|EJK61739.1| hypothetical protein THAOC_17719 [Thalassiosira oceanica]
Length = 309
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 65/105 (61%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
M+RRYD TT FSPEGRL+QV+Y G VG E VTS LL +
Sbjct: 1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTSVGILAKDGVVMASEKKVTSGLLAPAR 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++EK YK+ H C+VAG+ +DANILI+ AR++A RY Y +QEPI
Sbjct: 61 TSEKTYKLCPHATCSVAGLTADANILIDQARLRAGRYEYQFQEPI 105
>gi|124513788|ref|XP_001350250.1| proteasome subunit, putative [Plasmodium falciparum 3D7]
gi|23615667|emb|CAD52659.1| proteasome subunit, putative [Plasmodium falciparum 3D7]
Length = 246
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 65/103 (63%), Gaps = 18/103 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNV-TSKLLQTST 42
M+RRYD +TT FSPEGRLYQV+Y G ++G + V SKL+ +
Sbjct: 1 MARRYDSRTTTFSPEGRLYQVEYALEAINNASITIGLITKDGVILGADKVFISKLIDKAN 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ EK+YKID H+ C VAG+ +DANILIN +R+ A+RY Y Y E
Sbjct: 61 NYEKIYKIDKHIFCGVAGLNADANILINQSRLYAQRYLYNYNE 103
>gi|323348418|gb|EGA82663.1| Pre9p [Saccharomyces cerevisiae Lalvin QA23]
gi|365765413|gb|EHN06921.1| Pre9p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 258
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 64/104 (61%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y G +G E VTS LL+ TS
Sbjct: 3 SRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTS 62
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
EK+YK++D +A AVAG+ +DA ILINTAR A+ Y Y E I
Sbjct: 63 TEKLYKLNDKIAVAVAGLTADAEILINTARXHAQNYLKTYNEDI 106
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPS-GKVKYRICSPESLTML 147
DYKDDM +A++LALK L KT DS++LT ++LE A + + G+V +I P+ + +
Sbjct: 179 DYKDDMKVDDAIELALKTLSKTTDSSALTYDRLEFATIRKGANDGEVYQKIFKPQEIKDI 238
Query: 148 LENFGVAQ 155
L G+ +
Sbjct: 239 LVKTGITK 246
>gi|219110765|ref|XP_002177134.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411669|gb|EEC51597.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 264
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 63/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
M+RRYD TT FSPEGRL+QV+Y G VG E +TS LL S
Sbjct: 1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILARDGIVMASERRITSGLLAPSK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++EK Y + H AC VAG+ +DANILI AR++A RY Y YQEPI
Sbjct: 61 TSEKTYPLAAHAACNVAGLTADANILIEQARLRAGRYQYQYQEPI 105
>gi|255717723|ref|XP_002555142.1| KLTH0G02376p [Lachancea thermotolerans]
gi|238936526|emb|CAR24705.1| KLTH0G02376p [Lachancea thermotolerans CBS 6340]
Length = 251
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 68/104 (65%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTS 43
SRR+D +TT+FSPEGRLYQV+Y G +G E VTSKLL+ +S
Sbjct: 3 SRRFDSRTTIFSPEGRLYQVEYALESISHAGTAIGVMAKDGIVLAAERKVTSKLLEQGSS 62
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D++ AVAG+ +DA ILINTAR+ A+ Y +Y E I
Sbjct: 63 SEKLYKLNDNITVAVAGLTADAEILINTARLFAQNYLKSYNEEI 106
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
DYKDD+T +EA +LALK L KT DS++LT E++E + + L +GK+ +I P+ + LL
Sbjct: 179 DYKDDITVEEATELALKTLSKTTDSSTLTPERVEFSTITKLDNGKIAQKIFKPQEIETLL 238
Query: 149 ENFGVAQ 155
GV +
Sbjct: 239 NKTGVTK 245
>gi|50290521|ref|XP_447692.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527002|emb|CAG60637.1| unnamed protein product [Candida glabrata]
Length = 257
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 63/104 (60%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y G +G E VTS LL+ TS
Sbjct: 3 SRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMTSEGIVLAAERKVTSTLLEQDTS 62
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
EK+YK++D AVAG+ +DA ILINTAR+ A+ Y Y E I
Sbjct: 63 TEKLYKLNDRTTVAVAGLTADAEILINTARIHAQNYLKTYNEEI 106
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 5/74 (6%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKV---KYRICSPESLT 145
DYKD+MT +AV+LALK L KT DS+SLT ++LE A L G+ + +I P +
Sbjct: 179 DYKDEMTLDDAVELALKTLSKTTDSSSLTYDRLEFAT--LKKKGETEEFEQKIFKPAEIK 236
Query: 146 MLLENFGVAQPASE 159
LL G+++ + E
Sbjct: 237 QLLIKTGISKKSDE 250
>gi|209878941|ref|XP_002140911.1| proteasome subunit alpha type 4 [Cryptosporidium muris RN66]
gi|209556517|gb|EEA06562.1| proteasome subunit alpha type 4, putative [Cryptosporidium muris
RN66]
Length = 251
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 71/124 (57%), Gaps = 28/124 (22%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTST 42
MSRRYD +TT FSP+GRLYQV+Y +G L + V SKLL
Sbjct: 1 MSRRYDSRTTTFSPDGRLYQVEYALEAINKAAPTIGILCKDGVILAADKAVVSKLLDPGR 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQL 102
+ EK+Y ID+H+ CAVAG+ +DANILI+ AR+ A+RY Y Y E RQ QL
Sbjct: 61 TLEKLYTIDNHIICAVAGLTADANILISQARIDAQRYQYTYGE----------RQPVEQL 110
Query: 103 ALKV 106
+++
Sbjct: 111 VIQI 114
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
Q++K+D++ E + L KVL KTMD+TS ++ KLE +
Sbjct: 177 QEWKNDLSVDEGLLLIAKVLTKTMDTTSPSANKLEFS 213
>gi|366993485|ref|XP_003676507.1| hypothetical protein NCAS_0E00760 [Naumovozyma castellii CBS 4309]
gi|342302374|emb|CCC70146.1| hypothetical protein NCAS_0E00760 [Naumovozyma castellii CBS 4309]
Length = 259
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 64/104 (61%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y G +G E VTS LL+ TS
Sbjct: 3 SRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMADDGLVLAAERKVTSTLLEQDTS 62
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
EK+YK++D + AVAG+ +DA ILINTARV A+ Y Y E I
Sbjct: 63 TEKLYKLNDKITVAVAGLTADAEILINTARVYAQSYLKTYNEEI 106
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFL-LPSGKVKYRICSPESLTML 147
DYKD+M +A++LALK L KT DS+SLT +KLELA + + +V +I PE L L
Sbjct: 179 DYKDNMKLDDAIELALKTLSKTTDSSSLTYDKLELATIKKGTTTDEVYQKIYKPEELKEL 238
Query: 148 LENFGVAQPA 157
L G+ + +
Sbjct: 239 LLKTGITKKS 248
>gi|448119213|ref|XP_004203677.1| Piso0_000693 [Millerozyma farinosa CBS 7064]
gi|359384545|emb|CCE78080.1| Piso0_000693 [Millerozyma farinosa CBS 7064]
Length = 250
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 69/105 (65%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAQEAISQAGTAIGILSTEGVVLACEKKVTSKLLDDDG 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y+I+D++ CAVAG+ +DA+IL+N+AR+ A++Y Y E +
Sbjct: 61 SAEKIYEINDNMMCAVAGMNADASILVNSARLYAQQYLKTYNEEM 105
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 33/41 (80%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFL 128
+DYKDDM+ +EA +LA+KVL KT+DS++L EKLE A + L
Sbjct: 177 KDYKDDMSLKEACELAVKVLSKTIDSSNLKGEKLEFATLSL 217
>gi|365991976|ref|XP_003672816.1| hypothetical protein NDAI_0L00880 [Naumovozyma dairenensis CBS 421]
gi|410729859|ref|XP_003671108.2| hypothetical protein NDAI_0G00890 [Naumovozyma dairenensis CBS 421]
gi|401779927|emb|CCD25865.2| hypothetical protein NDAI_0G00890 [Naumovozyma dairenensis CBS 421]
Length = 254
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 65/104 (62%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y +G +V E VTS LL+ TS
Sbjct: 3 SRRYDSRTTIFSPEGRLYQVEYALESISHAGTGIGIMVPDGIVLAAERKVTSTLLEQDTS 62
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
EK+YK++D + AVAG+ +DA ILINTAR+ A+ Y Y E I
Sbjct: 63 IEKLYKLNDKITVAVAGLTADAEILINTARIHAQNYLKTYNEDI 106
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPS-GKVKYRICSPESLTML 147
DYKDDM EA++LALK L KT DS+SLT +KLE A + + G+V +I P+ + L
Sbjct: 179 DYKDDMRLDEAIELALKTLSKTTDSSSLTYDKLEFATIKKGKNDGEVYQKIYKPDEIKEL 238
Query: 148 LENFGVAQ 155
L GV +
Sbjct: 239 LIKTGVTK 246
>gi|421975964|gb|AFX73014.1| proteasome subunit alpha type 4 Spirometra erinaceieuropaei
[Spirometra erinaceieuropaei]
Length = 247
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 66/105 (62%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E +KLL +
Sbjct: 1 MARRYDTRTTIFSPEGRLYQVEYAMEAVGHAGTCLGIVAKDGIVLAAEKRFINKLLDETA 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YKI+D +ACAVAGI +DA +LIN R+ A+RY YQEP+
Sbjct: 61 FSEKIYKINDDIACAVAGITADATVLINEMRLIAQRYLLNYQEPM 105
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
DY + T ++AV+L++KVL KTM + LTS+K+E+
Sbjct: 178 DYDPEATTEDAVKLSVKVLHKTMTMSKLTSDKVEIG 213
>gi|156840806|ref|XP_001643781.1| hypothetical protein Kpol_480p10 [Vanderwaltozyma polyspora DSM
70294]
gi|156114406|gb|EDO15923.1| hypothetical protein Kpol_480p10 [Vanderwaltozyma polyspora DSM
70294]
Length = 259
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 64/104 (61%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y G +G E VTS LL+ TS
Sbjct: 3 SRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTS 62
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
EK+Y+++D + AVAG+ +DA ILINTARV A+ Y Y E I
Sbjct: 63 TEKIYRLNDKITVAVAGLTADAEILINTARVHAQEYLKTYNEEI 106
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
DYKDD+ EA++LALK L KT DS++LT +++E A + + K+ +I PE + LL
Sbjct: 179 DYKDDIKVDEAIELALKTLSKTTDSSALTYDRVEFATIKKGENDKIYQKIFKPEEIKQLL 238
Query: 149 ENFGVAQ 155
G+ +
Sbjct: 239 LKTGITK 245
>gi|259146637|emb|CAY79894.1| Pre9p [Saccharomyces cerevisiae EC1118]
Length = 258
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 64/104 (61%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y G +G E VTS LL+ TS
Sbjct: 3 SRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTS 62
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
EK+YK++D +A AVAG+ +DA ILINTAR A+ Y Y E I
Sbjct: 63 TEKLYKLNDKIAVAVAGLTADAEILINTARNHAQNYLKTYNEDI 106
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPS-GKVKYRICSPESLTML 147
DYKDDM +A++LALK L KT DS++LT ++LE A + + G+V +I P+ + +
Sbjct: 179 DYKDDMKVDDAIELALKTLSKTTDSSALTYDRLEFATIRKGANDGEVYQKIFKPQEIKDI 238
Query: 148 LENFGVAQ 155
L G+ +
Sbjct: 239 LVKTGITK 246
>gi|50416403|ref|XP_457549.1| DEHA2B13860p [Debaryomyces hansenii CBS767]
gi|49653214|emb|CAG85559.1| DEHA2B13860p [Debaryomyces hansenii CBS767]
Length = 250
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 66/105 (62%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E TSKLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAQEAISQAGTAIGILSTEGVVLACEKKFTSKLLDDDG 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ CAVAG+ +DA+IL+N ARV A++Y Y E I
Sbjct: 61 SAEKLYVLNDNMICAVAGMTADASILVNNARVNAQQYLKLYNEDI 105
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSG-KVKYRICSPESLTM 146
+DYKDDM +EA +LA+K+L KT+D+++L S+KLE A + + K+ ++I E +
Sbjct: 177 KDYKDDMNLKEACELAIKILSKTIDNSNLNSDKLEFATLSHSSNKEKIVHKIWGSEDIDS 236
Query: 147 LLENFGVAQPASE 159
L++ GV E
Sbjct: 237 LIKESGVLDRVDE 249
>gi|449019113|dbj|BAM82515.1| 20S core proteasome subunit alpha 3 [Cyanidioschyzon merolae strain
10D]
Length = 264
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 22/109 (20%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM--------GCL----------VGENNVTSKLL---- 38
MSRRYD++ T FSPEGRLYQV+Y CL E SKLL
Sbjct: 1 MSRRYDQRVTTFSPEGRLYQVEYALEAISHAGACLGILCSDGVVLAAERRNLSKLLDKRG 60
Query: 39 QTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ + ++EKMY+ID+H+ CAVAGI +DAN LI AR+ A+RY Y Y EP+
Sbjct: 61 RITRASEKMYEIDNHIGCAVAGITADANALIQKARLFAQRYLYTYNEPV 109
>gi|37654720|gb|AAQ96654.1| proteasome alpha 4 subunit [Branchiostoma belcheri tsingtauense]
Length = 262
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 65/105 (61%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLVGENNV-------TSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L + V T KLL
Sbjct: 1 MSRRYDTRTTIFSPEGRLYQVEYAMEAIGHAGTRLGILANDGIVLAAERRNTHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+ D +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLHDDMACSVAGITSDANVLTNELRLIAQRYILQYQEPI 105
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 41/58 (70%), Gaps = 10/58 (17%)
Query: 88 QDYK-DDMTRQEAVQLALKVLRKTMDSTSLTSEKLELA---------EVFLLPSGKVK 135
Q+YK D+MT Q+A+QLA+KV+ KT+D + LT E++ELA +V +LPS +V+
Sbjct: 177 QEYKIDEMTMQDALQLAIKVVSKTLDVSKLTPEEVELATLTRENNKTKVQVLPSKQVE 234
>gi|453088699|gb|EMF16739.1| proteasome subunit alpha type-4 [Mycosphaerella populorum SO2202]
Length = 252
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 66/105 (62%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E VTSKLL+ T
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYALEAISHAGTALGILATDGIVLAAERKVTSKLLEQDT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ AVAG+ +DANILIN AR A+RY Y I
Sbjct: 61 SAEKLYILNDNMITAVAGMTADANILINYARQAAQRYLLTYNADI 105
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDY +D T +A +LA+KVL KTMDST L+SEK+E A V G + +++ S E + L
Sbjct: 177 QDYNEDCTLNQACELAVKVLSKTMDSTKLSSEKIEFATVGRTEKGTIYHKLWSAEEIDSL 236
Query: 148 LENFGVAQPASE 159
L+ G+ + AS+
Sbjct: 237 LKEHGLGKAASD 248
>gi|300123907|emb|CBK25178.2| unnamed protein product [Blastocystis hominis]
gi|300174996|emb|CBK20307.2| unnamed protein product [Blastocystis hominis]
Length = 217
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 18/104 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSR YD +TT FSPEGRLYQV+Y C +G E + SKLL
Sbjct: 1 MSREYDERTTTFSPEGRLYQVEYAMEAINNAPCAIGILTKEGIAFGIEKKIISKLLAKIG 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
+EK+Y ID+H+ CAVAG+ SDANIL+ AR A+ Y Y Y +P
Sbjct: 61 ESEKVYAIDNHIMCAVAGLTSDANILLQNARKNAQEYLYKYGQP 104
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 29/37 (78%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
+DYK++MT +EA+ L +VL KTMD + L+++++E +
Sbjct: 177 KDYKEEMTLEEAMMLEARVLFKTMDVSELSTDRMEFS 213
>gi|226489755|emb|CAX75028.1| proteasome (prosome macropain) subunit alpha type 4 [Schistosoma
japonicum]
gi|226489761|emb|CAX75031.1| proteasome (prosome macropain) subunit alpha type 4 [Schistosoma
japonicum]
Length = 247
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 66/105 (62%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E + LL +
Sbjct: 1 MARRYDTRTTIFSPEGRLYQVEYAMEAVGHAGTCLGIVAKDGIVLAAEKRFINNLLDETV 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YKI+D +ACAVAGI +DA +LIN R+ A+RY +YQEP+
Sbjct: 61 FSEKIYKINDDIACAVAGITADATVLINEMRLIAQRYLLSYQEPM 105
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
QDY + T +EA +L +KVL KTM + LTSEK+E+
Sbjct: 177 QDYNPEATVEEATKLCVKVLYKTMTVSKLTSEKVEIG 213
>gi|226489757|emb|CAX75029.1| proteasome (prosome macropain) subunit alpha type 4 [Schistosoma
japonicum]
Length = 240
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 66/105 (62%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E + LL +
Sbjct: 1 MARRYDTRTTIFSPEGRLYQVEYAMEAVGHAGTCLGIVAKDGIVLAAEKRFINNLLDETV 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YKI+D +ACAVAGI +DA +LIN R+ A+RY +YQEP+
Sbjct: 61 FSEKIYKINDDIACAVAGITADATVLINEMRLIAQRYLLSYQEPM 105
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
QDY + T +EA +L +KVL KTM + LTSEK+E+
Sbjct: 177 QDYNPEATVEEATKLCVKVLYKTMTVSKLTSEKVEIG 213
>gi|256084130|ref|XP_002578285.1| proteasome subunit alpha 4 (T01 family) [Schistosoma mansoni]
gi|350644352|emb|CCD60901.1| proteasome subunit alpha 4 (T01 family) [Schistosoma mansoni]
Length = 247
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 66/105 (62%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E + LL +
Sbjct: 1 MARRYDTRTTIFSPEGRLYQVEYAMEAVGHAGTCLGVVAKDGIVLAAEKRFINNLLDETV 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YKI+D +ACAVAGI +DA +LIN R+ A+RY +YQEP+
Sbjct: 61 FSEKIYKINDDIACAVAGITADATVLINEMRLIAQRYLLSYQEPM 105
Score = 41.6 bits (96), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
QDY D T +EA +L +KVL KTM + LTSEK+E+
Sbjct: 177 QDYNADATVEEATKLCIKVLYKTMTMSKLTSEKVEIG 213
>gi|148227030|ref|NP_001089811.1| uncharacterized protein LOC734876 [Xenopus laevis]
gi|76779672|gb|AAI06639.1| MGC132180 protein [Xenopus laevis]
Length = 261
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNDDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+ELA +GK K R+ + +
Sbjct: 177 QDYKEGEMTLKSALALAVKVLNKTMDVSKLSAEKVELA-TLTRENGKTKIRVLKQKEVEE 235
Query: 147 LLE 149
L++
Sbjct: 236 LIK 238
>gi|389584511|dbj|GAB67243.1| 20S proteasome alpha subunit C [Plasmodium cynomolgi strain B]
Length = 246
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 64/103 (62%), Gaps = 18/103 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNV-TSKLLQTST 42
M+RRYD +TT FSPEGRLYQV+Y G ++G + V SKL+ +
Sbjct: 1 MARRYDSRTTTFSPEGRLYQVEYALEAINNASITIGIITNEGVILGADKVFISKLIDKAN 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ EK+YKID H+ C VAG+ +DANILIN +R+ +RY Y Y +
Sbjct: 61 NFEKIYKIDKHIFCGVAGLNADANILINQSRLYTQRYLYNYND 103
>gi|410912399|ref|XP_003969677.1| PREDICTED: proteasome subunit alpha type-4-like [Takifugu rubripes]
Length = 261
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNDDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT A+ LA+KVL KTMD + L++EK+E+A GK K ++ + +
Sbjct: 177 QDYKEGEMTLLSALALAVKVLNKTMDVSKLSAEKVEIA-TLTREDGKTKIKVLKQKEVEE 235
Query: 147 LLE 149
L++
Sbjct: 236 LIK 238
>gi|156101261|ref|XP_001616324.1| 20S proteasome alpha subunit C [Plasmodium vivax Sal-1]
gi|148805198|gb|EDL46597.1| 20S proteasome alpha subunit C, putative [Plasmodium vivax]
Length = 246
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 64/103 (62%), Gaps = 18/103 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNV-TSKLLQTST 42
M+RRYD +TT FSPEGRLYQV+Y G ++G + V SKL+ +
Sbjct: 1 MARRYDSRTTTFSPEGRLYQVEYALEAINNASITIGIITNEGVILGADKVFISKLIDKAN 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ EK+YKID H+ C VAG+ +DANILIN +R+ +RY Y Y +
Sbjct: 61 NFEKIYKIDKHIFCGVAGLNADANILINQSRLYTQRYLYNYND 103
>gi|387914280|gb|AFK10749.1| proteasome alpha 4 subunit [Callorhinchus milii]
Length = 261
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNDDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDY++ +MT A+ LA+KVL KTMD + L++EK+E+A +GK + ++ + +
Sbjct: 177 QDYEEGEMTLLSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTRIKVLKQKEVEE 235
Query: 147 LLE 149
L++
Sbjct: 236 LIK 238
>gi|221057694|ref|XP_002261355.1| proteasome subunit [Plasmodium knowlesi strain H]
gi|194247360|emb|CAQ40760.1| proteasome subunit, putative [Plasmodium knowlesi strain H]
Length = 246
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 64/103 (62%), Gaps = 18/103 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNV-TSKLLQTST 42
M+RRYD +TT FSPEGRLYQV+Y G ++G + V SKL+ +
Sbjct: 1 MARRYDSRTTTFSPEGRLYQVEYALEAINNASITIGIITSEGVILGADKVFISKLIDKAN 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ EK+YKID H+ C VAG+ +DANILIN +R+ +RY Y Y +
Sbjct: 61 NFEKIYKIDKHIFCGVAGLNADANILINQSRLYTQRYLYNYND 103
>gi|392877408|gb|AFM87536.1| proteasome alpha 4 subunit [Callorhinchus milii]
Length = 261
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNDDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT A+ LA+KVL KTMD + L++EK+E+A +GK + ++ + +
Sbjct: 177 QDYKEGEMTLLSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTRIKVLKQKEVEE 235
Query: 147 LLE 149
L++
Sbjct: 236 LIK 238
>gi|392878408|gb|AFM88036.1| proteasome alpha 4 subunit [Callorhinchus milii]
Length = 261
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNDDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT A+ LA+KVL KTMD + L++EK+E+A +GK + ++ + +
Sbjct: 177 QDYKEGEMTLLSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTRIKVLKQKEVEE 235
Query: 147 LLE 149
L++
Sbjct: 236 LIK 238
>gi|56118656|ref|NP_001007998.1| proteasome alpha 4 subunit [Xenopus (Silurana) tropicalis]
gi|51703820|gb|AAH80876.1| proteasome (prosome macropain) subunit alpha type 4 [Xenopus
(Silurana) tropicalis]
gi|89266778|emb|CAJ83532.1| proteasome (prosome macropain) subunit alpha type 4 [Xenopus
(Silurana) tropicalis]
Length = 261
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNDDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ DMT + A+ LA+KVL KTMD + L++EK+E+A +GK K R+ + +
Sbjct: 177 QDYKEGDMTLKSALALAVKVLNKTMDVSKLSAEKVEIA-TLTRENGKTKIRVLKQKEVEE 235
Query: 147 LLE 149
L++
Sbjct: 236 LIK 238
>gi|403214022|emb|CCK68523.1| hypothetical protein KNAG_0B00760 [Kazachstania naganishii CBS
8797]
Length = 259
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 63/104 (60%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y G +G E VTS LL+ TS
Sbjct: 3 SRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGVLAQDGIVIAAERKVTSTLLEQDTS 62
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
EK+Y+++D + AVAG+ +DA ILINTARV + Y Y E I
Sbjct: 63 TEKLYRLNDKIVVAVAGLTADAEILINTARVHCQNYLKTYGEDI 106
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFL-LPSGKVKYRICSPESLTML 147
DYKD++T +EA +LALK L KT DS++LT +++E + + G+V +I P + L
Sbjct: 179 DYKDEITLEEATELALKTLSKTTDSSALTYDRVEFSTIKRGKEEGQVIQKIYKPSEIKQL 238
Query: 148 LENFGVAQPASE 159
L G+ + +E
Sbjct: 239 LVKSGITKKDAE 250
>gi|147905508|ref|NP_001080690.1| proteasome alpha 4 subunit [Xenopus laevis]
gi|27924191|gb|AAH44983.1| Psma4-prov protein [Xenopus laevis]
Length = 261
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDDVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNDDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 88 QDYKDD-MTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ MT + A+ LA+KVL KTMD + L++EK+ELA +GK K R+ + +
Sbjct: 177 QDYKEGGMTLKSALALAVKVLNKTMDVSKLSAEKVELA-TLTRENGKTKIRVLQQKEVEE 235
Query: 147 LLE 149
L++
Sbjct: 236 LIK 238
>gi|344230978|gb|EGV62863.1| N-terminal nucleophile aminohydrolase [Candida tenuis ATCC 10573]
gi|344230979|gb|EGV62864.1| hypothetical protein CANTEDRAFT_115796 [Candida tenuis ATCC 10573]
Length = 248
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLVGENNV-------TSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y MG L E V TSKLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAQESISMAGTAMGILTKEGVVLACEKKFTSKLLDNDG 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y I+D + AVAG+ SDA+IL+N AR ++Y Y EP+
Sbjct: 61 SAEKLYIINDRMVAAVAGMTSDASILVNRARYFGQQYLKTYNEPV 105
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
+DYKDD+T +E +LA+K+L KTMDS+++ S+KLE A K+ ++I S + +L
Sbjct: 177 KDYKDDLTLKEGCELAIKILSKTMDSSTINSDKLEFA-TLSKKGDKIIHKIWSDNDIQLL 235
Query: 148 LENFGV 153
+++ GV
Sbjct: 236 IKDTGV 241
>gi|383859475|ref|XP_003705220.1| PREDICTED: uncharacterized protein LOC100875492 [Megachile
rotundata]
Length = 610
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 63/106 (59%), Gaps = 18/106 (16%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM--------GC----------LVGENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y C LV E T+KLL
Sbjct: 354 MARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTCVGILATDGVLLVAERRNTNKLLDEVH 413
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+EK+YK++D + C VAGI SDAN+L N RV A+R+ Y EPI
Sbjct: 414 YSEKIYKLNDDIVCCVAGITSDANVLTNELRVNAQRHLLRYGEPIH 459
>gi|260804394|ref|XP_002597073.1| hypothetical protein BRAFLDRAFT_201484 [Branchiostoma floridae]
gi|229282335|gb|EEN53085.1| hypothetical protein BRAFLDRAFT_201484 [Branchiostoma floridae]
Length = 262
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 64/104 (61%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCLVGENNV-------TSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y +G L + V T KLL
Sbjct: 2 SRRYDTRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGIVLAAERRNTHKLLDEVFF 61
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+ D +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 62 SEKIYKLHDDMACSVAGITSDANVLTNELRLIAQRYILQYQEPI 105
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 10/58 (17%)
Query: 88 QDYK-DDMTRQEAVQLALKVLRKTMDSTSLTSEKLELA---------EVFLLPSGKVK 135
Q+YK D+MT Q+A+QLA+KV+ KT+D + LT EK+ELA +V +LPS +V+
Sbjct: 177 QEYKIDEMTMQDALQLAIKVVSKTLDVSKLTPEKVELATLTRENNKTKVQVLPSKQVE 234
>gi|67587330|ref|XP_665249.1| proteasome subunit [Cryptosporidium hominis TU502]
gi|54655817|gb|EAL35019.1| proteasome subunit [Cryptosporidium hominis]
Length = 261
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 65/108 (60%), Gaps = 20/108 (18%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-----------------GCLVGENN-VTSKLLQTST 42
MSRRYD +TT FSPEGRLYQV+Y G ++G + + SKLL
Sbjct: 1 MSRRYDSRTTTFSPEGRLYQVEYALEAINNAAPTVGILCKEGVILGADKAIVSKLLDQGK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE--PIQ 88
S EK+Y ID H+ AVAG+ +DANILI AR+ ++RY Y Y E P++
Sbjct: 61 SLEKIYTIDRHIIAAVAGLTADANILIAQARIDSQRYQYTYGEEQPVE 108
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEV-FLLPSGKVKYRICSPESLTM 146
Q++ +D+T ++ + L KVL KTMD+TS T++K E + + S K +I S + +
Sbjct: 177 QEWNEDLTLEQGLHLVAKVLTKTMDTTSPTADKFEFSILTHNNESNKCSQKILSEKEIGE 236
Query: 147 LLE 149
LLE
Sbjct: 237 LLE 239
>gi|323509271|dbj|BAJ77528.1| cgd4_250 [Cryptosporidium parvum]
Length = 261
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 65/108 (60%), Gaps = 20/108 (18%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-----------------GCLVGENN-VTSKLLQTST 42
MSRRYD +TT FSPEGRLYQV+Y G ++G + + SKLL
Sbjct: 1 MSRRYDSRTTTFSPEGRLYQVEYALEAINNAAPTVGILCKEGVILGADKAIVSKLLDQGK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE--PIQ 88
S EK+Y ID H+ AVAG+ +DANILI AR+ ++RY Y Y E P++
Sbjct: 61 SLEKIYTIDRHIIAAVAGLTADANILIAQARIDSQRYQYTYGEEQPVE 108
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEV-FLLPSGKVKYRICSPESLTM 146
Q++ +D+T ++ + L KVL KTMD+TS T++K E + + S K +I S + +
Sbjct: 177 QEWNEDLTLEQGLHLVAKVLTKTMDTTSPTADKFEFSILTHNNESNKCSQKILSEKEIGE 236
Query: 147 LLE 149
LLE
Sbjct: 237 LLE 239
>gi|66356910|ref|XP_625633.1| proteasome subunit alpha type 4, NTN hydrolase fold
[Cryptosporidium parvum Iowa II]
gi|46226753|gb|EAK87732.1| proteasome subunit alpha type 4, NTN hydrolase fold
[Cryptosporidium parvum Iowa II]
Length = 271
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 65/108 (60%), Gaps = 20/108 (18%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-----------------GCLVGENN-VTSKLLQTST 42
MSRRYD +TT FSPEGRLYQV+Y G ++G + + SKLL
Sbjct: 11 MSRRYDSRTTTFSPEGRLYQVEYALEAINNAAPTVGILCKEGVILGADKAIVSKLLDQGK 70
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE--PIQ 88
S EK+Y ID H+ AVAG+ +DANILI AR+ ++RY Y Y E P++
Sbjct: 71 SLEKIYTIDRHIIAAVAGLTADANILIAQARIDSQRYQYTYGEEQPVE 118
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEV-FLLPSGKVKYRICSPESLTM 146
Q++ +D+T ++ + L KVL KTMD+TS T++K E + + S K +I S + +
Sbjct: 187 QEWNEDLTLEQGLHLVAKVLTKTMDTTSPTADKFEFSILTHNNESNKCSQKILSEKEIGE 246
Query: 147 LLE 149
LLE
Sbjct: 247 LLE 249
>gi|229367772|gb|ACQ58866.1| Proteasome subunit alpha type-4 [Anoplopoma fimbria]
Length = 261
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 65/105 (61%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL +
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVS 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
QD+K+ +MT A+ LA+KVL KTMD + L++EK+E+A
Sbjct: 177 QDFKEGEMTLSTALALAVKVLNKTMDVSKLSAEKVEIA 214
>gi|325183433|emb|CCA17894.1| proteasome subunit alpha putative [Albugo laibachii Nc14]
Length = 250
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 64/103 (62%), Gaps = 18/103 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT FSPEGRL+QV+Y G VG E V SKLL +
Sbjct: 1 MSRRYDGRTTTFSPEGRLFQVEYAIEAINNAGSAVGILAKTGIIIAAEKKVASKLLAPAK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
++ K ++DDH+ CAVAG+ +DA+ILIN AR+ A+RY YQ+
Sbjct: 61 NSGKTLRLDDHIICAVAGLTADADILINYARLSAQRYELTYQQ 103
>gi|429329909|gb|AFZ81668.1| proteasome subunit alpha type, putative [Babesia equi]
Length = 255
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 64/103 (62%), Gaps = 18/103 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTST 42
MSRRYD +TT FSPEGRLYQV+Y +G L V + V+SKLL
Sbjct: 1 MSRRYDSRTTTFSPEGRLYQVEYALEAINNASLTIGVLCDHGVVLVADKPVSSKLLDPGK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
EK+YK+D H+ CAVAG+ +DA +LIN ++ A+R+ Y+Y E
Sbjct: 61 INEKLYKLDSHIFCAVAGLTADATVLINMCKLYAQRHRYSYGE 103
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 29/37 (78%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
Q++K+++T ++A +LA+KVL K MDS+S + K+E+
Sbjct: 177 QEWKNNLTLEDATKLAVKVLVKAMDSSSPQASKIEVG 213
>gi|189054923|dbj|BAG37907.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 65/105 (61%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL +
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEAF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A +GK R+ + +
Sbjct: 177 QDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQ 235
Query: 147 LL 148
L+
Sbjct: 236 LI 237
>gi|50549081|ref|XP_502011.1| YALI0C19382p [Yarrowia lipolytica]
gi|49647878|emb|CAG82331.1| YALI0C19382p [Yarrowia lipolytica CLIB122]
Length = 250
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 63/104 (60%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y G +G E VTSKLL+ TS
Sbjct: 3 SRRYDSRTTIFSPEGRLYQVEYAQEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTS 62
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
AEKMY +++ + CAVAG+ SDA IL+ AR A+ Y Y E I
Sbjct: 63 AEKMYTLNESMVCAVAGLNSDAGILVQNARKSAQDYLRTYNEEI 106
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKDDMT EA +LA+K+L KTMD+T+LTSEKLE A V V +RI P+ + L
Sbjct: 178 QDYKDDMTLAEACELAVKILSKTMDNTNLTSEKLEFATVSKDAKDHVVHRIWQPDQIDQL 237
Query: 148 LENFGVAQ 155
L++ G+ +
Sbjct: 238 LKDSGLGK 245
>gi|399218632|emb|CCF75519.1| unnamed protein product [Babesia microti strain RI]
Length = 259
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 63/101 (62%), Gaps = 18/101 (17%)
Query: 4 RYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAE 45
RYD +TT FSPEGR+YQV+Y +G LV + V+S LL S S E
Sbjct: 3 RYDSRTTTFSPEGRMYQVEYALEAINNASLTIGILSKEGVVLVADKPVSSTLLGDSYSLE 62
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
K+YKIDDH+ CA+AG+ +DA+ LIN R+ A+R+ Y + EP
Sbjct: 63 KLYKIDDHIFCAIAGLTADADTLINLCRLYAQRHVYTFGEP 103
>gi|225703170|gb|ACO07431.1| Proteasome subunit alpha type 4 [Oncorhynchus mykiss]
Length = 261
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRSIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
QD+K+ +M+ A+ LA+KVL KTMD + L++EK+E+A
Sbjct: 177 QDFKEGEMSLSSALALAVKVLNKTMDVSKLSAEKVEIA 214
>gi|209735488|gb|ACI68613.1| Proteasome subunit alpha type-4 [Salmo salar]
Length = 261
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGSCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
QD+K+ +M+ A+ LA+KVL KTMD + L++EK+E+A
Sbjct: 177 QDFKEGEMSLSSALALAVKVLNKTMDVSKLSAEKVEIA 214
>gi|197632223|gb|ACH70835.1| proteasome (prosome, macropain) subunit, alpha type, 4 [Salmo
salar]
gi|209734114|gb|ACI67926.1| Proteasome subunit alpha type-4 [Salmo salar]
gi|225704770|gb|ACO08231.1| Proteasome subunit alpha type 4 [Oncorhynchus mykiss]
Length = 261
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGSCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QD+K+ +M+ A+ LA+KVL KTMD + L++EK+E+A GK K ++ + +
Sbjct: 177 QDFKEGEMSLSSALALAVKVLNKTMDVSKLSAEKVEIA-TLTREDGKTKIKVLKQKEVEE 235
Query: 147 LLE 149
L++
Sbjct: 236 LIK 238
>gi|225716624|gb|ACO14158.1| Proteasome subunit alpha type-4 [Esox lucius]
Length = 261
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
QD+K+ +M+ A+ LA+KVL KTMD + L++EK+E+A
Sbjct: 177 QDFKEGEMSLSSALALAVKVLNKTMDVSKLSAEKVEIA 214
>gi|225704204|gb|ACO07948.1| Proteasome subunit alpha type 4 [Oncorhynchus mykiss]
Length = 261
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGSCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QD+K+ +M+ A+ LA+KVL KTMD + L++EK+E+A GK K ++ + +
Sbjct: 177 QDFKEGEMSLSSALALAVKVLNKTMDVSKLSAEKVEIA-TLTREGGKTKIKVLKQKEVEE 235
Query: 147 LLE 149
L++
Sbjct: 236 LIK 238
>gi|74151744|dbj|BAE29663.1| unnamed protein product [Mus musculus]
Length = 261
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDLACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A SGK R+ + +
Sbjct: 177 QDYKEGEMTLKSALALAVKVLNKTMDVSKLSAEKVEIA-TLTRESGKTVIRVLKQKEVEQ 235
Query: 147 LL 148
L+
Sbjct: 236 LI 237
>gi|213510924|ref|NP_001134515.1| Proteasome subunit alpha type-4 [Salmo salar]
gi|209733934|gb|ACI67836.1| Proteasome subunit alpha type-4 [Salmo salar]
Length = 261
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGSCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QD+K+ +M+ A+ LA+KVL KTMD + L++EK+E+A GK K ++ + +
Sbjct: 177 QDFKEGEMSLSSALALAVKVLNKTMDVSKLSAEKVEIA-TLTREDGKTKIKVLKQKDVEE 235
Query: 147 LLE 149
L++
Sbjct: 236 LIK 238
>gi|332252665|ref|XP_003275474.1| PREDICTED: proteasome subunit alpha type-4 [Nomascus leucogenys]
Length = 245
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A +GK R+ + +
Sbjct: 161 QDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQ 219
Query: 147 LL 148
L+
Sbjct: 220 LI 221
>gi|350535088|ref|NP_001232410.1| putative Proteasome subunit alpha type 4 [Taeniopygia guttata]
gi|197127389|gb|ACH43887.1| putative Proteasome subunit alpha type 4 [Taeniopygia guttata]
Length = 261
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A +GK R+ + +
Sbjct: 177 QDYKEGEMTLKTALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQ 235
Query: 147 LLE 149
L++
Sbjct: 236 LIK 238
>gi|310750337|ref|NP_001185531.1| proteasome subunit alpha type-4 [Gallus gallus]
Length = 261
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A +GK R+ + +
Sbjct: 177 QDYKEGEMTLKTALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQ 235
Query: 147 LLE 149
L++
Sbjct: 236 LIK 238
>gi|197127388|gb|ACH43886.1| putative proteasome subunit alpha type 4 [Taeniopygia guttata]
Length = 261
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A +GK R+ + +
Sbjct: 177 QDYKEGEMTLKTALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQ 235
Query: 147 LLE 149
L++
Sbjct: 236 LIK 238
>gi|348526654|ref|XP_003450834.1| PREDICTED: proteasome subunit alpha type-4-like [Oreochromis
niloticus]
Length = 261
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT A+ LA+KVL KTMD + L++EK+E+A GK K ++ + +
Sbjct: 177 QDYKEGEMTLSSALALAVKVLNKTMDVSKLSAEKVEIA-TLTREDGKTKIKVLKQKEVEE 235
Query: 147 LLE 149
L++
Sbjct: 236 LIK 238
>gi|6755196|ref|NP_036096.1| proteasome subunit alpha type-4 [Mus musculus]
gi|9910830|sp|Q9R1P0.1|PSA4_MOUSE RecName: Full=Proteasome subunit alpha type-4; AltName:
Full=Macropain subunit C9; AltName: Full=Multicatalytic
endopeptidase complex subunit C9; AltName:
Full=Proteasome component C9; AltName: Full=Proteasome
subunit L
gi|378792304|pdb|3UNB|B Chain B, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792318|pdb|3UNB|P Chain P, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792332|pdb|3UNB|DD Chain d, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792346|pdb|3UNB|RR Chain r, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792360|pdb|3UNE|B Chain B, Mouse Constitutive 20s Proteasome
gi|378792374|pdb|3UNE|P Chain P, Mouse Constitutive 20s Proteasome
gi|378792388|pdb|3UNE|DD Chain d, Mouse Constitutive 20s Proteasome
gi|378792402|pdb|3UNE|RR Chain r, Mouse Constitutive 20s Proteasome
gi|378792416|pdb|3UNF|B Chain B, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792430|pdb|3UNF|P Chain P, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792444|pdb|3UNH|B Chain B, Mouse 20s Immunoproteasome
gi|378792458|pdb|3UNH|P Chain P, Mouse 20s Immunoproteasome
gi|5757663|gb|AAD50538.1|AF060093_1 proteasome subunit C9 [Mus musculus]
gi|12805051|gb|AAH01982.1| Proteasome (prosome, macropain) subunit, alpha type 4 [Mus
musculus]
gi|26351873|dbj|BAC39573.1| unnamed protein product [Mus musculus]
gi|74207746|dbj|BAE40115.1| unnamed protein product [Mus musculus]
gi|148693889|gb|EDL25836.1| mCG9679 [Mus musculus]
Length = 261
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A SGK R+ + +
Sbjct: 177 QDYKEGEMTLKSALALAVKVLNKTMDVSKLSAEKVEIA-TLTRESGKTVIRVLKQKEVEQ 235
Query: 147 LL 148
L+
Sbjct: 236 LI 237
>gi|432851211|ref|XP_004066910.1| PREDICTED: proteasome subunit alpha type-4-like [Oryzias latipes]
Length = 261
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
QDYK+ +MT A+ LA+KVL KTMD + L++EK+E+A
Sbjct: 177 QDYKEGEMTLSSALALAVKVLNKTMDVSKLSAEKVEIA 214
>gi|410960409|ref|XP_003986782.1| PREDICTED: proteasome subunit alpha type-4 [Felis catus]
Length = 261
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A +GK R+ + +
Sbjct: 177 QDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQ 235
Query: 147 LLEN 150
L++N
Sbjct: 236 LIKN 239
>gi|301775280|ref|XP_002923048.1| PREDICTED: proteasome subunit alpha type-4-like [Ailuropoda
melanoleuca]
Length = 261
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A +GK R+ + +
Sbjct: 177 QDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQ 235
Query: 147 LLEN 150
L++N
Sbjct: 236 LIKN 239
>gi|47550827|ref|NP_999862.1| proteasome subunit alpha type-4 [Danio rerio]
gi|28279709|gb|AAH45970.1| Proteasome (prosome, macropain) subunit, alpha type, 4 [Danio
rerio]
gi|182891032|gb|AAI64668.1| Psma4 protein [Danio rerio]
Length = 261
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT A+ LA+KVL KTMD + L++EK+E+A +GK K ++ + +
Sbjct: 177 QDYKEGEMTLSAALALAVKVLNKTMDVSKLSAEKVEIA-TLTRENGKTKIKVLKQKEVEE 235
Query: 147 LL 148
L+
Sbjct: 236 LI 237
>gi|209733720|gb|ACI67729.1| Proteasome subunit alpha type-4 [Salmo salar]
Length = 261
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 63/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM--------GCL----------VGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y CL E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGSCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRI 138
QD+K+ +M+ A+ LA+KVL KTMD + L++EK+E+A GK K ++
Sbjct: 177 QDFKEGEMSLSSALALAVKVLNKTMDVSKLSAEKVEIA-TLTREDGKTKIKV 227
>gi|8394069|ref|NP_058977.1| proteasome subunit alpha type-4 [Rattus norvegicus]
gi|130862|sp|P21670.1|PSA4_RAT RecName: Full=Proteasome subunit alpha type-4; AltName:
Full=Macropain subunit C9; AltName: Full=Multicatalytic
endopeptidase complex subunit C9; AltName:
Full=Proteasome component C9; AltName: Full=Proteasome
subunit L
gi|56641|emb|CAA39458.1| multicatalytic proteinase subunit L [Rattus rattus]
gi|57000|emb|CAA37390.1| unnamed protein product [Rattus norvegicus]
gi|149041716|gb|EDL95557.1| proteasome (prosome, macropain) subunit, alpha type 4, isoform
CRA_a [Rattus norvegicus]
Length = 261
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A +GK R+ + +
Sbjct: 177 QDYKEGEMTLKSALALAVKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQ 235
Query: 147 LL 148
L+
Sbjct: 236 LI 237
>gi|221219640|gb|ACM08481.1| Proteasome subunit alpha type-4 [Salmo salar]
Length = 261
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
QD+K+ +M+ A+ LA+KVL KTMD + L++EK+E+A
Sbjct: 177 QDFKEGEMSLSSALALAVKVLNKTMDVSKLSAEKVEIA 214
>gi|154334143|ref|XP_001563323.1| putative proteasome alpha 3 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060339|emb|CAM37500.1| putative proteasome alpha 3 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 285
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 64/111 (57%), Gaps = 24/111 (21%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQT-- 40
MS RYD +TT FSPEGRLYQV+Y +G L GE V L +
Sbjct: 1 MSHRYDSRTTTFSPEGRLYQVEYAVEAIQQAGTVIGVCTKGGVVLAGEKMVPHPLFDSEN 60
Query: 41 ----STSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+TS EKMYKI +H+ C+VAG+ SDA L+N AR+ A R+ Y +QEP+
Sbjct: 61 MQDKNTSGEKMYKIAEHIGCSVAGVTSDAYALLNYARLAAHRHQYTFQEPM 111
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 28/37 (75%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
+D+ +DMT Q+ + LAL+VL KTMD+ + +++E+A
Sbjct: 183 KDWHNDMTLQDGMLLALRVLSKTMDTAKIDLDRVEMA 219
>gi|74177575|dbj|BAE38897.1| unnamed protein product [Mus musculus]
Length = 249
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A SGK R+ + +
Sbjct: 177 QDYKEGEMTLKSALALAVKVLNKTMDVSKLSAEKVEIA-TLTRESGKTVIRVLKQKEVEQ 235
Query: 147 LL 148
L+
Sbjct: 236 LI 237
>gi|38649313|gb|AAH63170.1| Proteasome (prosome, macropain) subunit, alpha type 4 [Rattus
norvegicus]
Length = 261
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A +GK R+ + +
Sbjct: 177 QDYKEGEMTLKSALALAVKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQ 235
Query: 147 LL 148
L+
Sbjct: 236 LI 237
>gi|4506185|ref|NP_002780.1| proteasome subunit alpha type-4 isoform 1 [Homo sapiens]
gi|77735717|ref|NP_001029553.1| proteasome subunit alpha type-4 [Bos taurus]
gi|156713442|ref|NP_001096137.1| proteasome subunit alpha type-4 isoform 1 [Homo sapiens]
gi|347300165|ref|NP_001231397.1| proteasome subunit alpha type-4 [Sus scrofa]
gi|383873360|ref|NP_001244491.1| proteasome subunit alpha type-4 [Macaca mulatta]
gi|114658352|ref|XP_001150677.1| PREDICTED: proteasome subunit alpha type-4 isoform 10 [Pan
troglodytes]
gi|114658354|ref|XP_001150746.1| PREDICTED: proteasome subunit alpha type-4 isoform 11 [Pan
troglodytes]
gi|114658360|ref|XP_001151019.1| PREDICTED: proteasome subunit alpha type-4 isoform 13 [Pan
troglodytes]
gi|296223921|ref|XP_002757825.1| PREDICTED: proteasome subunit alpha type-4-like [Callithrix
jacchus]
gi|296228626|ref|XP_002759892.1| PREDICTED: proteasome subunit alpha type-4 [Callithrix jacchus]
gi|297697231|ref|XP_002825769.1| PREDICTED: proteasome subunit alpha type-4 isoform 1 [Pongo abelii]
gi|297697233|ref|XP_002825770.1| PREDICTED: proteasome subunit alpha type-4 isoform 2 [Pongo abelii]
gi|332844466|ref|XP_003314855.1| PREDICTED: proteasome subunit alpha type-4 [Pan troglodytes]
gi|397485457|ref|XP_003813862.1| PREDICTED: proteasome subunit alpha type-4 isoform 1 [Pan paniscus]
gi|397485459|ref|XP_003813863.1| PREDICTED: proteasome subunit alpha type-4 isoform 2 [Pan paniscus]
gi|402875025|ref|XP_003901321.1| PREDICTED: proteasome subunit alpha type-4 [Papio anubis]
gi|426248232|ref|XP_004017868.1| PREDICTED: proteasome subunit alpha type-4 isoform 1 [Ovis aries]
gi|426379953|ref|XP_004056651.1| PREDICTED: proteasome subunit alpha type-4 isoform 1 [Gorilla
gorilla gorilla]
gi|426379955|ref|XP_004056652.1| PREDICTED: proteasome subunit alpha type-4 isoform 2 [Gorilla
gorilla gorilla]
gi|130861|sp|P25789.1|PSA4_HUMAN RecName: Full=Proteasome subunit alpha type-4; AltName:
Full=Macropain subunit C9; AltName: Full=Multicatalytic
endopeptidase complex subunit C9; AltName:
Full=Proteasome component C9; AltName: Full=Proteasome
subunit L
gi|122140948|sp|Q3ZCK9.1|PSA4_BOVIN RecName: Full=Proteasome subunit alpha type-4
gi|21465644|pdb|1IRU|C Chain C, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|21465658|pdb|1IRU|Q Chain Q, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|220030|dbj|BAA00660.1| proteasome subunit C9 [Homo sapiens]
gi|13529191|gb|AAH05361.1| Proteasome (prosome, macropain) subunit, alpha type, 4 [Homo
sapiens]
gi|18490884|gb|AAH22445.1| Proteasome (prosome, macropain) subunit, alpha type, 4 [Homo
sapiens]
gi|28839483|gb|AAH47667.1| Proteasome (prosome, macropain) subunit, alpha type, 4 [Homo
sapiens]
gi|32879911|gb|AAP88786.1| proteasome (prosome, macropain) subunit, alpha type, 4 [Homo
sapiens]
gi|61361191|gb|AAX42008.1| proteasome subunit alpha type 4 [synthetic construct]
gi|67970776|dbj|BAE01730.1| unnamed protein product [Macaca fascicularis]
gi|73586888|gb|AAI02103.1| Proteasome (prosome, macropain) subunit, alpha type, 4 [Bos taurus]
gi|119619569|gb|EAW99163.1| proteasome (prosome, macropain) subunit, alpha type, 4, isoform
CRA_a [Homo sapiens]
gi|119619570|gb|EAW99164.1| proteasome (prosome, macropain) subunit, alpha type, 4, isoform
CRA_a [Homo sapiens]
gi|123983547|gb|ABM83465.1| proteasome (prosome, macropain) subunit, alpha type, 4 [synthetic
construct]
gi|123998149|gb|ABM86676.1| proteasome (prosome, macropain) subunit, alpha type, 4 [synthetic
construct]
gi|261859964|dbj|BAI46504.1| proteasome (prosome, macropain) subunit, alpha type, 4 [synthetic
construct]
gi|296475399|tpg|DAA17514.1| TPA: proteasome subunit alpha type-4 [Bos taurus]
gi|380814776|gb|AFE79262.1| proteasome subunit alpha type-4 isoform 1 [Macaca mulatta]
gi|383420081|gb|AFH33254.1| proteasome subunit alpha type-4 isoform 1 [Macaca mulatta]
gi|384948312|gb|AFI37761.1| proteasome subunit alpha type-4 isoform 1 [Macaca mulatta]
gi|410252478|gb|JAA14206.1| proteasome (prosome, macropain) subunit, alpha type, 4 [Pan
troglodytes]
gi|410287352|gb|JAA22276.1| proteasome (prosome, macropain) subunit, alpha type, 4 [Pan
troglodytes]
gi|410333277|gb|JAA35585.1| proteasome (prosome, macropain) subunit, alpha type, 4 [Pan
troglodytes]
Length = 261
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A +GK R+ + +
Sbjct: 177 QDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQ 235
Query: 147 LL 148
L+
Sbjct: 236 LI 237
>gi|354471447|ref|XP_003497954.1| PREDICTED: proteasome subunit alpha type-4-like [Cricetulus
griseus]
gi|344247650|gb|EGW03754.1| Proteasome subunit alpha type-4 [Cricetulus griseus]
Length = 261
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A +GK R+ + +
Sbjct: 177 QDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTMIRVLKQKEVEQ 235
Query: 147 LL 148
L+
Sbjct: 236 LI 237
>gi|403304913|ref|XP_003943023.1| PREDICTED: proteasome subunit alpha type-4 [Saimiri boliviensis
boliviensis]
Length = 261
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A +GK R+ + +
Sbjct: 177 QDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQ 235
Query: 147 LL 148
L+
Sbjct: 236 LI 237
>gi|229367458|gb|ACQ58709.1| Proteasome subunit alpha type-4 [Anoplopoma fimbria]
Length = 261
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
QD+K+ +MT A+ LA+KVL KTMD + L++EK+E+A
Sbjct: 177 QDFKEGEMTLSTALALAVKVLNKTMDVSKLSAEKVEIA 214
>gi|225704660|gb|ACO08176.1| Proteasome subunit alpha type 4 [Oncorhynchus mykiss]
Length = 261
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
QD+K+ +M+ A+ LA+KVL KTMD + L++EK+E+A
Sbjct: 177 QDFKEGEMSLSSALALAVKVLNKTMDVSKLSAEKVEIA 214
>gi|332376146|gb|AEE63213.1| unknown [Dendroctonus ponderosae]
Length = 259
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 65/105 (61%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L V E T+KLL
Sbjct: 1 MARRYDTRTTIFSPEGRLYQVEYAMEAISLAGTCLGILANDGILLVAERRNTNKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++EK+YK+++ + C+VAGI SDAN+L N RV +RY Y Y E I
Sbjct: 61 TSEKIYKLNEDMVCSVAGITSDANVLTNELRVIGQRYLYQYGESI 105
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
Q+YK+ +MT A LA+KVL KT+D T LTSEK+E+A + + + K I + + +
Sbjct: 177 QEYKEGEMTLASAKSLAVKVLSKTLDMTKLTSEKVEMATLSRV-NDKTVINILNAKEVDA 235
Query: 147 LLENFGVAQPASEVS 161
L+ + ++ A+E S
Sbjct: 236 LIAEYEKSEAANEAS 250
>gi|334313721|ref|XP_001376636.2| PREDICTED: proteasome subunit alpha type-4-like [Monodelphis
domestica]
Length = 261
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 88 QDYKDD-MTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ MT + A+ LA+KVL KTMD + L++EK+E+A +GK R+ + +
Sbjct: 177 QDYKEGGMTLKSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTTIRVLKQKEVEQ 235
Query: 147 LL 148
L+
Sbjct: 236 LI 237
>gi|149633630|ref|XP_001511366.1| PREDICTED: proteasome subunit alpha type-4-like [Ornithorhynchus
anatinus]
gi|395501100|ref|XP_003754936.1| PREDICTED: proteasome subunit alpha type-4 isoform 1 [Sarcophilus
harrisii]
Length = 261
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 88 QDYKDD-MTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ MT + A+ LA+KVL KTMD + L++EK+E+A +GK R+ + +
Sbjct: 177 QDYKEGGMTLKSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTTIRVLKQKEVEQ 235
Query: 147 LL 148
L+
Sbjct: 236 LI 237
>gi|73921826|sp|Q4R932.1|PSA4_MACFA RecName: Full=Proteasome subunit alpha type-4
gi|67967814|dbj|BAE00389.1| unnamed protein product [Macaca fascicularis]
Length = 261
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A +GK R+ + +
Sbjct: 177 QDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQ 235
Query: 147 LL 148
L+
Sbjct: 236 LI 237
>gi|162312364|ref|XP_001713040.1| 20S proteasome component alpha 3 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|1172601|sp|Q09682.1|PSA3_SCHPO RecName: Full=Probable proteasome subunit alpha type-3
gi|159883893|emb|CAA90475.2| 20S proteasome component alpha 3 (predicted) [Schizosaccharomyces
pombe]
Length = 248
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSR YD +TT+FSPEGRLYQV+Y +G L E VTSKLL+
Sbjct: 1 MSRSYDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEE 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y I D++ CAVAG+ +DANILIN AR ++Y + E +
Sbjct: 61 SAEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEM 105
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEV 126
Q+YKDD+ EA +A+K L KT+DS SLT EK+E A +
Sbjct: 177 QEYKDDINLDEASAMAVKFLSKTLDSNSLTHEKIEFATI 215
>gi|225716228|gb|ACO13960.1| Proteasome subunit alpha type-4 [Esox lucius]
Length = 234
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 63/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM--------GCL----------VGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y CL E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGACLGILANDGVLLAAERRNIHKLLDDVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
QD+K+ +M+ A+ LA+KVL KTMD + L++EK+E+A
Sbjct: 177 QDFKEGEMSLSSALALAVKVLNKTMDVSKLSAEKVEIA 214
>gi|291410735|ref|XP_002721651.1| PREDICTED: proteasome alpha 4 subunit-like [Oryctolagus cuniculus]
Length = 306
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 46 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 105
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 106 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 150
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A +GK R+ + +
Sbjct: 222 QDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQ 280
Query: 147 LL 148
L+
Sbjct: 281 LI 282
>gi|289742271|gb|ADD19883.1| 20S proteasome regulatory subunit alpha type PSMA4/PRE9 [Glossina
morsitans morsitans]
Length = 261
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM--------GCL--VGENNV--------TSKLLQTST 42
M+RRYD +TT FSPEGRLYQV+Y CL + E+ + T+KLL S
Sbjct: 1 MARRYDSRTTTFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRNTNKLLDGSI 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D++ C+VAGI SDAN+L N RV A+RY ++Y E +
Sbjct: 61 FSEKIYKLNDNMVCSVAGITSDANVLTNELRVIAQRYQFSYGESM 105
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 91 KDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLLEN 150
KD +T ++A LA+KVL KT+D+T LTSEK+E+A + K K I + + L+E
Sbjct: 182 KDKITLEKAKDLAVKVLSKTLDTTKLTSEKIEMA-TLQRSNDKTKINILTKSDVDQLIEK 240
Query: 151 F 151
+
Sbjct: 241 Y 241
>gi|47230708|emb|CAF99901.1| unnamed protein product [Tetraodon nigroviridis]
Length = 573
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 63/104 (60%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 SRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFF 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 SEKIYKLNDDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 104
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRI 138
QDYK+ +MT A+ LA+KVL KTMD + L++EK+E+A GK K ++
Sbjct: 176 QDYKEGEMTLSSALALAVKVLNKTMDVSKLSAEKVEIA-TLTREDGKTKIKV 226
>gi|335773320|gb|AEH58353.1| proteasome subunit alpha type-4-like protein, partial [Equus
caballus]
Length = 125
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
>gi|387017838|gb|AFJ51037.1| Proteasome subunit alpha type-4 [Crotalus adamanteus]
Length = 261
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 63/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNQDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ DMT + A+ LA+KVL KTMD + L++EK+E+A +GK R+ + + +
Sbjct: 177 QDYKEGDMTLKSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTIIRVLKQKEVEV 235
Query: 147 LLE 149
L++
Sbjct: 236 LIK 238
>gi|340713585|ref|XP_003395322.1| PREDICTED: proteasome subunit alpha type-4-like isoform 1 [Bombus
terrestris]
gi|340713587|ref|XP_003395323.1| PREDICTED: proteasome subunit alpha type-4-like isoform 2 [Bombus
terrestris]
Length = 257
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L V E +KLL
Sbjct: 1 MARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTCLGILATDGVLLVAERRNINKLLDEVY 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D + C+VAGI SDAN+L N R+ A+RY Y EPI
Sbjct: 61 YSEKIYKLNDDIVCSVAGITSDANVLTNELRLIAQRYLLQYGEPI 105
>gi|398012419|ref|XP_003859403.1| proteasome alpha 3 subunit, putative [Leishmania donovani]
gi|322497618|emb|CBZ32691.1| proteasome alpha 3 subunit, putative [Leishmania donovani]
Length = 285
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 64/111 (57%), Gaps = 24/111 (21%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQT-- 40
MS RYD +TT FSPEGRLYQV+Y +G L GE V L +
Sbjct: 1 MSHRYDSRTTTFSPEGRLYQVEYAVEAIQQAGTVIGVCTKDGVVLAGEKMVPHPLFDSEN 60
Query: 41 ----STSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+TS EKMYKI +H+ C+VAG+ SDA L+N AR+ A R+ Y +QEP+
Sbjct: 61 MQDKNTSGEKMYKIAEHIGCSVAGVTSDAYALLNYARLSALRHQYTFQEPM 111
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 32/47 (68%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKV 134
+D+ ++MT ++ + LAL+VL KTMD+ + ++E+A + +P+ V
Sbjct: 183 KDWHENMTLEDGMLLALRVLGKTMDTAKIDLARVEVAVMRKVPASNV 229
>gi|146081283|ref|XP_001464214.1| putative proteasome alpha 3 subunit [Leishmania infantum JPCM5]
gi|134068305|emb|CAM66591.1| putative proteasome alpha 3 subunit [Leishmania infantum JPCM5]
Length = 285
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 64/111 (57%), Gaps = 24/111 (21%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQT-- 40
MS RYD +TT FSPEGRLYQV+Y +G L GE V L +
Sbjct: 1 MSHRYDSRTTTFSPEGRLYQVEYAVEAIQQAGTVIGVCTKDGVVLAGEKMVPHPLFDSEN 60
Query: 41 ----STSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+TS EKMYKI +H+ C+VAG+ SDA L+N AR+ A R+ Y +QEP+
Sbjct: 61 MQDKNTSGEKMYKIAEHIGCSVAGVTSDAYALLNYARLSALRHQYTFQEPM 111
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 32/47 (68%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKV 134
+D+ ++MT ++ + LAL+VL KTMD+ + ++E+A + +P+ V
Sbjct: 183 KDWHENMTLEDGMLLALRVLGKTMDTAKIDLGRVEVAVMRKVPASNV 229
>gi|197127387|gb|ACH43885.1| putative proteasome subunit alpha type 4 [Taeniopygia guttata]
Length = 184
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
>gi|443698150|gb|ELT98287.1| hypothetical protein CAPTEDRAFT_152113 [Capitella teleta]
Length = 263
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 66/105 (62%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E T+KLL +
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILATDGIVLAAEKRSTNKLLDEVS 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+Y + + +AC++AGI SDAN+L N R+ A+RY+ YQEPI
Sbjct: 61 FSEKIYILYEDMACSLAGITSDANVLTNQLRLIAQRYSLQYQEPI 105
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 88 QDYKDDMTRQE-AVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ T A++L++KVL KT+D+ LT +K+E+A GK RI + +
Sbjct: 177 QDYKEGETDMPTALELSVKVLGKTLDTNKLTPDKVEIA-TLSRQDGKTVIRILPASEVEV 235
Query: 147 LLE 149
L++
Sbjct: 236 LIK 238
>gi|299116799|emb|CBN74912.1| proteasome subunit [Ectocarpus siliculosus]
Length = 249
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 63/103 (61%), Gaps = 18/103 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
M+RRYD TT FSPEGRL+QV+Y G VG E V SKLL S
Sbjct: 1 MARRYDSSTTTFSPEGRLHQVEYAIEAINNAGTCVGILAKDGIIMAAERKVVSKLLAPSK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
++EK Y++ ++ +C VAG+ +DAN+L+N ARV A+RY Y Y E
Sbjct: 61 TSEKTYRLYENASCVVAGLTADANLLVNHARVSAQRYLYQYGE 103
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
DY ++ + E ++LA+KVL KTMDST+ + EK+E + + +GK+ ++I + E +L
Sbjct: 178 DYVEESSVDECLKLAVKVLNKTMDSTTPSPEKMEFTTITRV-NGKIVHKILTDEESDKIL 236
Query: 149 E 149
+
Sbjct: 237 K 237
>gi|407833386|gb|EKF98756.1| proteasome alpha 3 subunit, putative [Trypanosoma cruzi]
Length = 286
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 63/111 (56%), Gaps = 24/111 (21%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQT-- 40
MS RYD +TT FSPEGRLYQV+Y G ++G E V + L +
Sbjct: 1 MSSRYDSRTTTFSPEGRLYQVEYAEEAISQAGTVIGILTTGGVVLGAEKGVQNSLFDSEN 60
Query: 41 ----STSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ S EKMYKI H+ C+VAG+ SDA L+N AR+ A R+ Y YQEP+
Sbjct: 61 MEDKNISGEKMYKIASHIGCSVAGVTSDAYALLNYARLSANRHHYTYQEPM 111
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 10/66 (15%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
+D+K ++T E + L L+VL KTMD+ L++E+LE+A V +++ +P + L
Sbjct: 183 RDWKPELTLDEGIVLCLRVLGKTMDTVKLSAERLEVA---------VLHKVPAPAT-QKL 232
Query: 148 LENFGV 153
LE +GV
Sbjct: 233 LEPYGV 238
>gi|401417818|ref|XP_003873401.1| putative proteasome alpha 3 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489631|emb|CBZ24889.1| putative proteasome alpha 3 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 285
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 63/111 (56%), Gaps = 24/111 (21%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQT-- 40
MS RYD +TT FSPEGRLYQV+Y +G L GE V L
Sbjct: 1 MSHRYDSRTTTFSPEGRLYQVEYAVEAIQQAGTVIGVCTKDGVVLAGEKMVPHPLFDNEN 60
Query: 41 ----STSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+TS EKMYKI +H+ C+VAG+ SDA L+N AR+ A R+ Y +QEP+
Sbjct: 61 MQDKNTSGEKMYKIAEHIGCSVAGVTSDAYALLNYARLSALRHQYTFQEPM 111
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 32/47 (68%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKV 134
+D+ ++MT ++ + LAL+VL KTMD+ + ++E+A + +P+ V
Sbjct: 183 KDWHENMTLEDGMLLALRVLGKTMDTAKIDLARVEVAVMRKVPASNV 229
>gi|209732692|gb|ACI67215.1| Proteasome subunit alpha type-4 [Salmo salar]
Length = 261
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 63/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY----MG--------------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGSRLEILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+ AGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSAAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
Q +K+ +M+ A+ LA+KVL KTMD + L++EK+E+A GK K ++ + +
Sbjct: 177 QGFKEGEMSLSSALALAVKVLNKTMDVSKLSAEKVEIA-TLTREDGKTKIKVLKQKEVEE 235
Query: 147 LLE 149
L++
Sbjct: 236 LIK 238
>gi|407399893|gb|EKF28469.1| proteasome alpha 3 subunit, putative [Trypanosoma cruzi
marinkellei]
Length = 286
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 63/111 (56%), Gaps = 24/111 (21%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQT-- 40
MS RYD +TT FSPEGRLYQV+Y G ++G E V + L +
Sbjct: 1 MSSRYDSRTTTFSPEGRLYQVEYAEEAISQAGTVIGILTTGGVVLGAEKGVQNSLFDSEN 60
Query: 41 ----STSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ S EKMYKI H+ C+VAG+ SDA L+N AR+ A R+ Y YQEP+
Sbjct: 61 MEDKNISGEKMYKIASHIGCSVAGVTSDAYALLNYARLSANRHHYTYQEPM 111
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 32/44 (72%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPS 131
+D+K ++T E + L L+VL KTMD+ L++E+LE+A + +P+
Sbjct: 183 RDWKPELTLDEGIVLCLRVLGKTMDTVKLSAERLEVAVLHKVPA 226
>gi|157866477|ref|XP_001687630.1| putative proteasome alpha 3 subunit [Leishmania major strain
Friedlin]
gi|68125244|emb|CAJ02729.1| putative proteasome alpha 3 subunit [Leishmania major strain
Friedlin]
Length = 285
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 63/111 (56%), Gaps = 24/111 (21%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQT-- 40
MS RYD +TT FSPEGRLYQV+Y +G L GE V L +
Sbjct: 1 MSHRYDSRTTTFSPEGRLYQVEYAVEAIQQAGTVIGVCTKDGVVLAGEKMVPHPLFDSEN 60
Query: 41 ----STSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ S EKMYKI +H+ C+VAG+ SDA L+N AR+ A R+ Y +QEPI
Sbjct: 61 MQDKNISGEKMYKIAEHIGCSVAGVTSDAYALLNYARLSALRHQYTFQEPI 111
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 32/47 (68%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKV 134
+D+ ++MT ++ + LAL+VL KTMD+ + ++E+A + +P+ V
Sbjct: 183 KDWHENMTLEDGMLLALRVLGKTMDTAKIDLGRVEVAVMRKVPASNV 229
>gi|355713998|gb|AES04855.1| proteasome subunit, alpha type, 4 [Mustela putorius furo]
Length = 173
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 5 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 64
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 65 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 109
>gi|71651059|ref|XP_814215.1| proteasome alpha 3 subunit [Trypanosoma cruzi strain CL Brener]
gi|70879168|gb|EAN92364.1| proteasome alpha 3 subunit, putative [Trypanosoma cruzi]
Length = 286
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 63/111 (56%), Gaps = 24/111 (21%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQT-- 40
MS RYD +TT FSPEGRLYQV+Y G ++G E V + L +
Sbjct: 1 MSSRYDSRTTTFSPEGRLYQVEYAEEAISQAGTVIGILTTGGVVLGAEKGVQNSLFDSEN 60
Query: 41 ----STSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ S EKMYKI H+ C+VAG+ SDA L+N AR+ A R+ Y YQEP+
Sbjct: 61 MEDNNISGEKMYKIASHIGCSVAGVTSDAYALLNYARLSANRHHYTYQEPM 111
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 32/44 (72%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPS 131
+D+K ++T E + L L+VL KTMD+ L++E+LE+A + +P+
Sbjct: 183 RDWKPELTLDEGIVLCLRVLGKTMDTVKLSAERLEVAVLHKVPA 226
>gi|442758861|gb|JAA71589.1| Putative 20s proteasome regulatory subunit alpha type psma4/pre9
[Ixodes ricinus]
Length = 262
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLVGENNV-------TSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L + V T+KLL
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILASDGIVLAAERRNTNKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+AEK+YK+ D +AC+VAGI SDAN+L N R A+RY Y E I
Sbjct: 61 TAEKIYKLHDDMACSVAGITSDANVLTNELRQIAQRYLLQYGESI 105
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 88 QDYKDD-MTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
Q+YK++ T ++A+ LA+KVL KT+D T LT++KLE+A
Sbjct: 177 QEYKENETTLKDALALAIKVLSKTLDMTKLTADKLEMA 214
>gi|391330552|ref|XP_003739722.1| PREDICTED: proteasome subunit alpha type-4-like [Metaseiulus
occidentalis]
Length = 267
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E T+KLL
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILATDGIVLASERRNTNKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++EK+YK+ D +AC+VAGI SDAN+L N R+ A+RY Y E I
Sbjct: 61 TSEKIYKLHDDMACSVAGITSDANVLTNELRLLAQRYLRQYDESI 105
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 39/58 (67%), Gaps = 10/58 (17%)
Query: 88 QDYKDD-MTRQEAVQLALKVLRKTMDSTSLTSEKLELA---------EVFLLPSGKVK 135
Q+YK++ T +A+ L++KVL KT+D T LT++K+E+A ++ +LP+ +V+
Sbjct: 177 QEYKENETTLDQALALSVKVLAKTLDMTKLTADKVEIATLKRVDNKTKISILPTSQVE 234
>gi|346469211|gb|AEO34450.1| hypothetical protein [Amblyomma maculatum]
Length = 264
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 63/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E T+KLL
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILASDGILLAAERRNTNKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+AEK+YK+ D +AC+VAGI SDAN+L N R A+RY Y E I
Sbjct: 61 TAEKIYKLHDDMACSVAGITSDANVLTNELRQIAQRYLLQYGESI 105
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 88 QDYKDD-MTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
Q+YK++ T ++A+ LA+KVL KT+D T LTS+KLE+A
Sbjct: 177 QEYKENETTLKDALALAIKVLSKTLDMTKLTSDKLEMA 214
>gi|332213470|ref|XP_003255848.1| PREDICTED: proteasome subunit alpha type-4-like [Nomascus
leucogenys]
Length = 261
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 63/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD + T+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRATIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A +GK R+ + +
Sbjct: 177 QDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQ 235
Query: 147 LL 148
L+
Sbjct: 236 LI 237
>gi|430811466|emb|CCJ31107.1| unnamed protein product [Pneumocystis jirovecii]
Length = 215
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 67/108 (62%), Gaps = 21/108 (19%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRL+QV+Y +G L E V SKLL+ +T
Sbjct: 1 MSRRYDSRTTIFSPEGRLFQVEYALEAISRAGTALGVLAEDGIVLAAEKKVISKLLEQNT 60
Query: 43 SAEKMYKIDD---HVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S+EK+Y +D+ H+ CAVAGI +DANILI+ R A++Y Y + I
Sbjct: 61 SSEKLYVVDEYYSHMICAVAGITADANILIDYTRRTAQKYLLTYNKHI 108
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEK 120
QDYK+ +EA LA+KVL KT+DST L++EK
Sbjct: 180 QDYKE-TNLKEACSLAIKVLSKTIDSTVLSNEK 211
>gi|427785111|gb|JAA58007.1| Putative 20s proteasome regulatory subunit alpha type psma4/pre9
[Rhipicephalus pulchellus]
Length = 265
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 63/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E T+KLL
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILASDGILLAAERRNTNKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+AEK+YK+ D +AC+VAGI SDAN+L N R A+RY Y E I
Sbjct: 61 TAEKIYKLHDDMACSVAGITSDANVLTNELRQIAQRYLLQYGESI 105
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 88 QDYKDD-MTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
Q+YK++ T ++A+ LA+KVL KT+D T LT++KLE+A
Sbjct: 177 QEYKENETTLKDALALAIKVLSKTLDMTKLTADKLEMA 214
>gi|351697795|gb|EHB00714.1| Proteasome subunit alpha type-4, partial [Heterocephalus glaber]
gi|355692916|gb|EHH27519.1| Proteasome subunit alpha type-4, partial [Macaca mulatta]
gi|355778226|gb|EHH63262.1| Proteasome subunit alpha type-4, partial [Macaca fascicularis]
gi|440912779|gb|ELR62316.1| Proteasome subunit alpha type-4, partial [Bos grunniens mutus]
Length = 261
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 63/104 (60%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 2 SRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFF 61
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 62 SEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A +GK R+ + +
Sbjct: 177 QDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQ 235
Query: 147 LL 148
L+
Sbjct: 236 LI 237
>gi|344284067|ref|XP_003413792.1| PREDICTED: proteasome subunit alpha type-4-like [Loxodonta
africana]
Length = 307
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 63/104 (60%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 48 SRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFF 107
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 108 SEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 151
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A
Sbjct: 223 QDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIA 260
>gi|34783332|gb|AAH22817.2| PSMA4 protein, partial [Homo sapiens]
Length = 260
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 63/104 (60%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 SRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFF 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 61 SEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 104
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A +GK R+ + +
Sbjct: 176 QDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQ 234
Query: 147 LL 148
L+
Sbjct: 235 LI 236
>gi|328771855|gb|EGF81894.1| hypothetical protein BATDEDRAFT_19045 [Batrachochytrium
dendrobatidis JAM81]
Length = 247
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 67/105 (63%), Gaps = 19/105 (18%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRL+QV+Y +G L E +SKLL+ +
Sbjct: 1 MARRYDSRTTIFSPEGRLFQVEYAMEAISHAGTALGVLSTEGIVLAAERKTSSKLLE-NI 59
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EK+Y+++D CAVAG+ +DAN LI+ RVQA++Y + + EPI
Sbjct: 60 SREKIYRLNDTTCCAVAGLNADANTLISYCRVQAQKYLFRFNEPI 104
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK++MT +EA LA+KVL K+MDST+L S+KLE A + P G + Y +P+ + L
Sbjct: 176 QDYKEEMTLKEAKALAIKVLAKSMDSTTLGSDKLEFATLSRGPKGNIVYHAFTPQEIDAL 235
Query: 148 LENFGV 153
++ G+
Sbjct: 236 IQEEGL 241
>gi|449281518|gb|EMC88575.1| Proteasome subunit alpha type-4 [Columba livia]
Length = 267
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 63/104 (60%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 8 SRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFF 67
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 68 SEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 111
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A +GK R+ + +
Sbjct: 183 QDYKEGEMTLKTALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQ 241
Query: 147 LLE 149
L++
Sbjct: 242 LIK 244
>gi|431920325|gb|ELK18360.1| Proteasome subunit alpha type-4 [Pteropus alecto]
Length = 287
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 63/104 (60%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 28 SRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFF 87
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 88 SEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 131
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A SGK R+ + +
Sbjct: 203 QDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRESGKTVIRVLKQKEVEQ 261
Query: 147 LLE 149
L++
Sbjct: 262 LIQ 264
>gi|156089275|ref|XP_001612044.1| proteasome A-type and B-type family protein [Babesia bovis]
gi|83616175|gb|ABC25612.1| putative proteasome subunit [Babesia bovis]
gi|154799298|gb|EDO08476.1| proteasome A-type and B-type family protein [Babesia bovis]
Length = 257
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 69/120 (57%), Gaps = 24/120 (20%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------------MGC-LVGENNVTSKLLQTST 42
MSRRYD +TT FS EGRLYQV+Y +G L + +++ LL
Sbjct: 1 MSRRYDTKTTTFSQEGRLYQVEYALEAINNANLTVGLLCDLGVVLAADKPISTPLLDPGK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQL 102
EK+YK+D H+ CAVAG+ +DA +LINT ++ A+R+ YAY EP QD Q VQ+
Sbjct: 61 INEKLYKLDSHMFCAVAGLTADATVLINTCKLYAQRHRYAYGEP-QD-----VEQHVVQI 114
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 32/45 (71%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSG 132
Q++K+ M EA+ LA+KVL K+MDST ++K+E+ ++ P+G
Sbjct: 177 QEWKEGMNLDEALYLAVKVLTKSMDSTMPKADKIEVGMLWRGPNG 221
>gi|307186251|gb|EFN71914.1| Proteasome subunit alpha type-4 [Camponotus floridanus]
Length = 490
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L V E T+KLL
Sbjct: 234 MARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTCLGILANDGILLVAEKRNTNKLLDEVF 293
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D + C+VAGI SDAN+L N R+ A+RY Y E I
Sbjct: 294 FSEKIYKLNDDIVCSVAGITSDANVLTNELRLIAQRYLLQYGEAI 338
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
Q+YK+ + T ++A+ LA+KVL KT+D L++EK+E+A + +GK K +I +
Sbjct: 410 QEYKEGETTLKDAMALAIKVLSKTLDMNKLSAEKVEMA-ILTRENGKTKTKILPANEVDT 468
Query: 147 LL 148
L+
Sbjct: 469 LI 470
>gi|53148461|dbj|BAD52258.1| proteasome alpha 4 subunit [Plutella xylostella]
Length = 257
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E T+KLL
Sbjct: 1 MARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S+EK+YK++D + C+VAGI SDAN+L N R+ A+RY Y E I
Sbjct: 61 SSEKIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESI 105
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 88 QDYKDD-MTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
Q+YK++ T EA LA+KVL KT+D T LT EK+E+A K R+ + +
Sbjct: 177 QEYKENETTLAEAQALAIKVLSKTLDMTKLTPEKVEMA-TLTRQGNKTVIRVLTSGEVEK 235
Query: 147 LLENF 151
L+ +F
Sbjct: 236 LIADF 240
>gi|195346263|ref|XP_002039685.1| GM15792 [Drosophila sechellia]
gi|195585260|ref|XP_002082407.1| GD11553 [Drosophila simulans]
gi|194135034|gb|EDW56550.1| GM15792 [Drosophila sechellia]
gi|194194416|gb|EDX07992.1| GD11553 [Drosophila simulans]
Length = 264
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E T+KLL ++
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAV 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+Y+++D++ C+VAGI SDAN+L + R+ A+RY ++Y E I
Sbjct: 61 PSEKIYRLNDNMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVI 105
>gi|146420386|ref|XP_001486149.1| hypothetical protein PGUG_01820 [Meyerozyma guilliermondii ATCC
6260]
Length = 267
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E TSKLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAQEAISLAGTAIGILAKDGVVLACEKKFTSKLLDDDG 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ AVAG+ +DA+IL+N AR A++Y Y E +
Sbjct: 61 SAEKLYALNDNMIAAVAGMTADASILVNHARYAAQKYLKTYNEQM 105
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFL 128
+DYKDD++ +EA QLA+KVL KTMDS +L EKLE A + L
Sbjct: 177 KDYKDDLSLEEACQLAVKVLLKTMDSQNLNGEKLEFATLSL 217
>gi|190345778|gb|EDK37722.2| hypothetical protein PGUG_01820 [Meyerozyma guilliermondii ATCC
6260]
Length = 267
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y G +G E TSKLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAQEAISLAGTAIGILAKDGVVLACEKKFTSKLLDDDG 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
SAEK+Y ++D++ AVAG+ +DA+IL+N AR A++Y Y E +
Sbjct: 61 SAEKLYALNDNMIAAVAGMTADASILVNHARYAAQKYLKTYNEQM 105
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFL 128
+DYKDD++ +EA QLA+KVL KTMDS +L EKLE A + L
Sbjct: 177 KDYKDDLSLEEACQLAVKVLSKTMDSQNLNGEKLEFATLSL 217
>gi|350409351|ref|XP_003488705.1| PREDICTED: hypothetical protein LOC100745131 [Bombus impatiens]
Length = 642
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTST 42
++RRYD +TT+FSPEGRLYQV+Y +G L V E +KLL
Sbjct: 386 LARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTCLGILATDGVLLVAERRNINKLLDEVY 445
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D + C+VAGI SDAN+L N R+ A+RY Y EPI
Sbjct: 446 YSEKIYKLNDDIVCSVAGITSDANVLTNELRLIAQRYLLQYGEPI 490
>gi|17136420|ref|NP_476691.1| proteasome 29kD subunit [Drosophila melanogaster]
gi|12643270|sp|P18053.2|PSA4_DROME RecName: Full=Proteasome subunit alpha type-4; AltName:
Full=PROS-Dm29; AltName: Full=Proteasome 29 kDa subunit
gi|7291219|gb|AAF46651.1| proteasome 29kD subunit [Drosophila melanogaster]
gi|19527527|gb|AAL89878.1| RE23862p [Drosophila melanogaster]
gi|220948176|gb|ACL86631.1| Pros29-PA [synthetic construct]
gi|220957410|gb|ACL91248.1| Pros29-PA [synthetic construct]
Length = 264
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E T+KLL ++
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAI 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+Y+++D++ C+VAGI SDAN+L + R+ A+RY ++Y E I
Sbjct: 61 PSEKIYRLNDNMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVI 105
>gi|281350262|gb|EFB25846.1| hypothetical protein PANDA_012136 [Ailuropoda melanoleuca]
Length = 210
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 63/104 (60%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 2 SRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFF 61
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 62 SEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 105
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 27/34 (79%), Gaps = 1/34 (2%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEK 120
QDYK+ +MT + A+ LA+KVL KTMD + L++EK
Sbjct: 177 QDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEK 210
>gi|380011487|ref|XP_003689834.1| PREDICTED: uncharacterized protein LOC100870087 [Apis florea]
Length = 528
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTSTS 43
+RRYD +TT+FSPEGRLYQV+Y +G L V E +KLL
Sbjct: 273 ARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTCLGILATNGILLVAERRNINKLLDEVYY 332
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D + C+VAGI SDAN+L N R+ A+RY Y EPI
Sbjct: 333 SEKIYKLNDDIVCSVAGITSDANVLTNELRLIAQRYLLQYGEPI 376
>gi|194881750|ref|XP_001974984.1| GG22074 [Drosophila erecta]
gi|195486683|ref|XP_002091609.1| GE12155 [Drosophila yakuba]
gi|190658171|gb|EDV55384.1| GG22074 [Drosophila erecta]
gi|194177710|gb|EDW91321.1| GE12155 [Drosophila yakuba]
Length = 264
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E T+KLL ++
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAI 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+Y+++D++ C+VAGI SDAN+L + R+ A+RY ++Y E I
Sbjct: 61 PSEKIYRLNDNMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVI 105
>gi|348555661|ref|XP_003463642.1| PREDICTED: proteasome subunit alpha type-4-like [Cavia porcellus]
Length = 323
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 63/104 (60%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 64 SRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFF 123
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 124 SEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 167
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A
Sbjct: 239 QDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIA 276
>gi|71411717|ref|XP_808096.1| proteasome alpha 3 subunit [Trypanosoma cruzi strain CL Brener]
gi|70872228|gb|EAN86245.1| proteasome alpha 3 subunit, putative [Trypanosoma cruzi]
Length = 286
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 63/111 (56%), Gaps = 24/111 (21%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQT-- 40
MS RYD +TT FSPEGRLYQV+Y G ++G E V + L +
Sbjct: 1 MSSRYDSRTTTFSPEGRLYQVEYAEEAISQAGTVIGILTTGGVVLGAEKGVQNSLFDSEN 60
Query: 41 ----STSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ S EK+YKI H+ C+VAG+ SDA L+N AR+ A R+ Y YQEP+
Sbjct: 61 MEDKNISGEKLYKIASHIGCSVAGVTSDAYALLNYARLSASRHHYTYQEPM 111
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 10/66 (15%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
+D++ ++T E + L L+VL KTMD+ L++E+LE+A V +++ +P + L
Sbjct: 183 RDWRSELTLDEGIVLCLRVLGKTMDTVKLSAERLEVA---------VLHKVPAPAT-QKL 232
Query: 148 LENFGV 153
LE +GV
Sbjct: 233 LEPYGV 238
>gi|157125112|ref|XP_001660626.1| proteasome subunit alpha type [Aedes aegypti]
gi|108873757|gb|EAT37982.1| AAEL010087-PA [Aedes aegypti]
Length = 261
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E T+KLL +
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTSLGILAKDGILLAAERRNTNKLLDSVI 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D + C+VAGI SDAN+L N RV A+RY Y E +
Sbjct: 61 FSEKIYKLNDDMVCSVAGITSDANVLTNLLRVIAQRYQLNYGEAM 105
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 93 DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
++T +A LA+KVL KT+D T LTSEK+E+A V + K +I S + L+
Sbjct: 183 EITLVQAQDLAVKVLSKTLDMTKLTSEKIEMA-VLTRENNKTVIKILSSTEVDALI 237
>gi|170050622|ref|XP_001861393.1| proteasome subunit alpha type 4 [Culex quinquefasciatus]
gi|167872194|gb|EDS35577.1| proteasome subunit alpha type 4 [Culex quinquefasciatus]
Length = 261
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E T+KLL +
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTSLGILAKDGILLAAERRNTNKLLDSVI 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D + C+VAGI SDAN+L N RV A+RY Y E +
Sbjct: 61 FSEKIYKLNDDMVCSVAGITSDANVLTNLLRVIAQRYQLNYGEAM 105
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 93 DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
++T +A LA+KVL KT+D T LTSEK+E+A V + K +I S + L+
Sbjct: 183 EITLGQAQDLAVKVLSKTLDMTKLTSEKIEMA-VLTRENNKTVIKILSSTEVDALI 237
>gi|326926468|ref|XP_003209422.1| PREDICTED: aminoglycoside phosphotransferase domain-containing
protein 1-like [Meleagris gallopavo]
Length = 635
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 376 SRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFF 435
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+Y++++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 436 SEKIYRLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 479
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A +GK R+ + +
Sbjct: 551 QDYKEGEMTLKTALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQ 609
Query: 147 LLE 149
L++
Sbjct: 610 LIK 612
>gi|393906563|gb|EFO25300.2| proteasome subunit alpha type-4 [Loa loa]
Length = 250
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 60/105 (57%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y G L+ E KLL
Sbjct: 1 MARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTCLGILASDGILIAAEKRNVHKLLDDEV 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
EK+Y++ D++AC VAGI +DANILIN R A Y Y+Y E I
Sbjct: 61 LTEKIYRLADNIACTVAGITADANILINHLRFWAADYKYSYGEHI 105
>gi|145343708|ref|XP_001416455.1| Proteasome subunit alpha type 4-like protein [Ostreococcus
lucimarinus CCE9901]
gi|144576680|gb|ABO94748.1| Proteasome subunit alpha type 4-like protein [Ostreococcus
lucimarinus CCE9901]
Length = 231
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 62/101 (61%), Gaps = 18/101 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
M+RRYD +TT FSPEGRL+QV+Y G +G E + SKLL+ S+
Sbjct: 1 MARRYDSRTTTFSPEGRLFQVEYALESVNHAGTCIGLHTENGILLASEKKIMSKLLEQSS 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAY 83
+ EK++KID H+ A+AG+ +DA ILIN ARV A RY Y
Sbjct: 61 TPEKLWKIDQHIVAAIAGLNADAMILINFARVIAGRYRARY 101
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLEL 123
D+ + ++ EA +A KVL+KTMD +LTS+K+E+
Sbjct: 178 DFTEGLSIDEAKSVACKVLQKTMDCVNLTSDKVEM 212
>gi|225557322|gb|EEH05608.1| proteasome component [Ajellomyces capsulatus G186AR]
Length = 256
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 62/98 (63%), Gaps = 18/98 (18%)
Query: 8 QTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEKMYK 49
+TT+FSPEGRLYQV+Y +G L E VTSKLL+ TSAEK+Y
Sbjct: 13 RTTIFSPEGRLYQVEYALEAISHAGTALGILAQDGIVLAAERKVTSKLLEQDTSAEKLYI 72
Query: 50 IDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 73 LNDNMICAVAGMTADANILINYARQAAQRYLLTYNEEI 110
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D +EA +A+KVL KTMDST L+SEK+E A V G++ + + + + L
Sbjct: 182 QDYKEDCDLKEACGMAVKVLSKTMDSTKLSSEKIEFATVGKTKDGQIYHHLWGADEIDAL 241
Query: 148 LENFGVAQPASE 159
L G+A+ A +
Sbjct: 242 LREHGLAKEADQ 253
>gi|158293714|ref|XP_315057.4| AGAP004960-PA [Anopheles gambiae str. PEST]
gi|157016578|gb|EAA10351.5| AGAP004960-PA [Anopheles gambiae str. PEST]
Length = 259
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 63/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E T+KLL
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTSLGILAKDGILLAAERRNTNKLLDNVI 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D + C+VAGI SDAN+L N RV A+RY Y E +
Sbjct: 61 FSEKIYKLNDDMVCSVAGITSDANVLTNLLRVIAQRYQLNYGEAM 105
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 93 DMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
D++ +A LA+KVL KT+D T LTSEK+E+A
Sbjct: 183 DISLVQAQDLAVKVLSKTLDMTKLTSEKIEMA 214
>gi|195027167|ref|XP_001986455.1| GH20521 [Drosophila grimshawi]
gi|193902455|gb|EDW01322.1| GH20521 [Drosophila grimshawi]
Length = 263
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLVGENNV-------TSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L + V T+KLL +
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGIVLAAECRSTNKLLDNAI 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++++ C+VAGI SDAN+L + R+ A+RY ++Y E I
Sbjct: 61 PSEKIYKLNENMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVI 105
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 27/34 (79%)
Query: 91 KDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
KD++ +EA LA+KVL KT+D+T LT EK+E+A
Sbjct: 182 KDNIKLEEAKDLAVKVLSKTLDTTKLTPEKVEMA 215
>gi|324523660|gb|ADY48280.1| Proteasome subunit alpha type-4, partial [Ascaris suum]
Length = 260
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 60/105 (57%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTCLGILASDGILIAAEKRNVHKLLDDEV 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
AEK+Y++ D++AC VAGI +DANILIN R A Y +Y E I
Sbjct: 61 LAEKIYRLSDNIACTVAGITADANILINHLRYWAAEYKLSYGEHI 105
>gi|2244874|emb|CAB10295.1| cell wall protein like [Arabidopsis thaliana]
gi|7268262|emb|CAB78558.1| cell wall protein like [Arabidopsis thaliana]
Length = 428
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 60/98 (61%), Gaps = 15/98 (15%)
Query: 27 LVGENNVTSKLLQTSTSAEKMYKIDDHVACAVAGI---------MSDANILINTARVQAR 77
LVGE VTSKLLQTS+S EKMYKIDDHVACAVAG MSD + N QA
Sbjct: 327 LVGEKKVTSKLLQTSSSMEKMYKIDDHVACAVAGWDRNHGFQLYMSDPS--GNYGGWQAA 384
Query: 78 RYAYAYQEP----IQDYKDDMTRQEAVQLALKVLRKTM 111
Q QDYKDD TR+E VQLA+KVL KTM
Sbjct: 385 AVGANNQAAQSILKQDYKDDATREEVVQLAIKVLSKTM 422
>gi|225712516|gb|ACO12104.1| Proteasome subunit alpha type-4 [Lepeophtheirus salmonis]
Length = 253
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRL+QV+Y G ++G E T+KLL
Sbjct: 1 MARRYDTRTTIFSPEGRLFQVEYAMEAIGHAGTVLGILATDGIVVAAERKNTNKLLDDVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+Y ++++V C+VAGI SDAN+L + R+ +RY Y Y PI
Sbjct: 61 HSEKIYSLNENVGCSVAGITSDANVLTHEMRLIGKRYEYVYGSPI 105
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 88 QDYKDD-MTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
Q+YK++ M E + LA+KVL KT+D T LT +K+E+A
Sbjct: 177 QEYKENEMNLNECLDLAIKVLTKTLDMTKLTPDKIEIA 214
>gi|91087493|ref|XP_968456.1| PREDICTED: similar to proteasome alpha 4 subunit [Tribolium
castaneum]
gi|270009464|gb|EFA05912.1| hypothetical protein TcasGA2_TC008727 [Tribolium castaneum]
Length = 258
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E T+KLL
Sbjct: 1 MARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTCLGILANDGILLAAERRNTNKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++EK+YK++D + C+VAGI SDAN+L N R+ +RY + Y E +
Sbjct: 61 TSEKIYKLNDDMVCSVAGITSDANVLTNELRLIGQRYLFQYGESM 105
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
Q+YK+ +MT ++A LA+KVL KT+D T LT+EK+E+A
Sbjct: 177 QEYKEGEMTLEDAKTLAIKVLVKTLDMTKLTAEKVEMA 214
>gi|388853997|emb|CCF52341.1| probable PRE9-20S proteasome subunit Y13 (alpha3) [Ustilago hordei]
Length = 270
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 67/119 (56%), Gaps = 25/119 (21%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT FSPEGRLYQV+Y G ++G E VTSKLL+
Sbjct: 1 MSRRYDSRTTTFSPEGRLYQVEYAMEAISHAGTVIGILAKDGIVLAAEKKVTSKLLEQDQ 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQ 101
S+EK++ + D+V VAG +DAN L+N AR A+RY + Y DDM ++ Q
Sbjct: 61 SSEKIFAVSDNVMAGVAGYTADANSLVNYARNAAQRY-------LASYDDDMPVEQLAQ 112
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFL-LPSGKVKYRICSPESLTM 146
QDYKDD+ QEA+ +A+ +L KTMDSTSL SEKLE A + L SGK + I P +
Sbjct: 177 QDYKDDIGIQEAMGMAVMILSKTMDSTSLDSEKLEFATLTLSAKSGKPQTNIFKPNDIDR 236
Query: 147 LLENFGVAQP 156
LL+ G+A+P
Sbjct: 237 LLQRHGLAKP 246
>gi|324522490|gb|ADY48068.1| Proteasome subunit alpha type-4 [Ascaris suum]
Length = 250
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 60/105 (57%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTCLGILASDGILIAAEKRNVHKLLDDEV 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
AEK+Y++ D++AC VAGI +DANILIN R A Y +Y E I
Sbjct: 61 LAEKIYRLSDNIACTVAGITADANILINHLRYWAAEYKLSYGEHI 105
>gi|72391542|ref|XP_846065.1| proteasome alpha 3 subunit [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175679|gb|AAX69811.1| proteasome alpha 3 subunit, putative [Trypanosoma brucei]
gi|70802601|gb|AAZ12506.1| proteasome alpha 3 subunit, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261329602|emb|CBH12584.1| proteasome alpha 3 subunit, putative [Trypanosoma brucei gambiense
DAL972]
Length = 286
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 63/111 (56%), Gaps = 24/111 (21%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQT-- 40
MS RYD +TT FSPEGRLYQV+Y G ++G E L T
Sbjct: 1 MSSRYDSRTTTFSPEGRLYQVEYAEEAISQAGTIIGILTTGGVVLGAERGQQHGLFDTEN 60
Query: 41 ----STSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ S EK+YKI +H+ C+VAG+ SDA LIN AR+ A R+ Y++QEPI
Sbjct: 61 MEDRNISGEKVYKISNHLGCSVAGVTSDAYALINYARLSAARHFYSFQEPI 111
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
+D+K ++T +E + L L+VL KTMD+ LT E+LE+A
Sbjct: 183 RDWKPELTLEEGIVLCLRVLGKTMDAVKLTPERLEVA 219
>gi|11066269|gb|AAG28528.1|AF198387_1 20S proteasome alpha 3 subunit [Trypanosoma brucei]
Length = 286
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 63/111 (56%), Gaps = 24/111 (21%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQT-- 40
MS RYD +TT FSPEGRLYQV+Y G ++G E L T
Sbjct: 1 MSSRYDSRTTTFSPEGRLYQVEYAEEAISQAGTIIGILTTGGVVLDAERGQQHGLFDTEN 60
Query: 41 ----STSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ S EK+YKI +H+ C+VAG+ SDA LIN AR+ A R+ Y++QEPI
Sbjct: 61 MEDINISGEKVYKISNHLGCSVAGVTSDAYALINYARLSAARHFYSFQEPI 111
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 12/67 (17%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM- 146
+D+K ++T +E + L L+VL KTMD+ LT E+LE+A V +R+ +P LT
Sbjct: 183 RDWKPELTLEEGIVLCLRVLGKTMDAVKLTPERLEVA---------VLHRVQAP--LTQK 231
Query: 147 LLENFGV 153
LL+ +GV
Sbjct: 232 LLDPYGV 238
>gi|340054812|emb|CCC49116.1| putative proteasome alpha 3 subunit [Trypanosoma vivax Y486]
Length = 285
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 61/111 (54%), Gaps = 24/111 (21%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY---------------------MGCLVGENNV---TSK 36
MS RYD +TT FSPEGRLYQV+Y +G G+ N T
Sbjct: 1 MSSRYDSRTTTFSPEGRLYQVEYAEEAISQAGTVVGILTSGGVVLGAERGQQNCLFDTEN 60
Query: 37 LLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ + S EK+YKI H+ C+VAG+ SDA LIN AR+ A R+ Y YQEP+
Sbjct: 61 MEDRNVSGEKVYKITHHLGCSVAGVTSDAYALINYARLSANRHYYTYQEPM 111
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPES 143
+D+K ++T E + L L+VL KTMD+ L+ E+LE+A + +PS ++ RI +P S
Sbjct: 183 RDWKPELTLDEGIVLCLRVLGKTMDTVKLSPERLEVAVLHHVPSPAIQ-RILNPYS 237
>gi|444319308|ref|XP_004180311.1| hypothetical protein TBLA_0D02920 [Tetrapisispora blattae CBS 6284]
gi|387513353|emb|CCH60792.1| hypothetical protein TBLA_0D02920 [Tetrapisispora blattae CBS 6284]
Length = 258
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 61/104 (58%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTS 43
SRRYD +TT+FSPEGRLYQV+Y +G L+ E +TSKLL+
Sbjct: 3 SRRYDSRTTIFSPEGRLYQVEYALESISHAGTSIGIMSKDGIVLLAERKITSKLLEQDIL 62
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
EK+YK+ D + AVAG+ +DA ILIN AR A+ Y Y E I
Sbjct: 63 NEKLYKLSDKITLAVAGLTADAEILINIARQFAQNYLMTYNEEI 106
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP--SGKVKYRICSPESLTM 146
DYKDDM +A++L LK L KT DS++LT +++EL+ + + K+ +I +P +
Sbjct: 179 DYKDDMNLNDAMELGLKTLSKTTDSSNLTYDRVELSIIKIDKENDNKIIQKIYNPAEIKQ 238
Query: 147 LLENFGVAQPASE 159
LL FG+ + E
Sbjct: 239 LLIKFGINKKNDE 251
>gi|194753670|ref|XP_001959133.1| GF12213 [Drosophila ananassae]
gi|190620431|gb|EDV35955.1| GF12213 [Drosophila ananassae]
Length = 265
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E T+KLL ++
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAI 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+Y++++++ C+VAGI SDAN+L + R+ A+RY ++Y E I
Sbjct: 61 PSEKIYRLNENMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVI 105
>gi|389609297|dbj|BAM18260.1| proteasome 29kD subunit [Papilio xuthus]
Length = 257
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 63/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E T+KLL
Sbjct: 1 MARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D + C+VAGI SDAN+L N R+ A+RY Y E I
Sbjct: 61 FSEKIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESI 105
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 88 QDYKDD-MTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
Q+YK++ T EA LA+KVL KT+D T LT EK+E+A
Sbjct: 177 QEYKENETTLAEAQALAIKVLSKTLDMTKLTPEKVEMA 214
>gi|357603122|gb|EHJ63634.1| proteasome alpha 4 subunit [Danaus plexippus]
Length = 257
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 63/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E T+KLL
Sbjct: 1 MARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D + C+VAGI SDAN+L N R+ A+RY Y E I
Sbjct: 61 FSEKIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESI 105
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 88 QDYKDD-MTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
Q+YK++ T EA LA+KVL KT+D T L+ EK+E+A K RI + +
Sbjct: 177 QEYKENETTLAEAQALAIKVLSKTLDMTKLSPEKVEMA-TLTRKDNKTIIRILTSAEVEK 235
Query: 147 LLENF 151
L+++F
Sbjct: 236 LIQDF 240
>gi|195123961|ref|XP_002006470.1| GI21067 [Drosophila mojavensis]
gi|193911538|gb|EDW10405.1| GI21067 [Drosophila mojavensis]
Length = 263
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 67/105 (63%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E T+KLL +
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGIVLAAECRSTNKLLDNAI 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+Y++++++ C+VAGI SDAN+L + R+ A+RY ++Y E I
Sbjct: 61 PSEKIYRLNENMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVI 105
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 91 KDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLLEN 150
K+ + +EA LA+KVL KT+D+T LT EK+E+A + + + V Y I + L+E
Sbjct: 182 KESIKLEEAKDLAIKVLSKTLDTTKLTPEKVEMATLQRINNATV-YSILEKPDVEKLIEK 240
Query: 151 F 151
+
Sbjct: 241 Y 241
>gi|8380|emb|CAA36555.1| unnamed protein product [Drosophila melanogaster]
Length = 264
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 67/105 (63%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E T+KLL ++
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAI 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+Y+ +D++ C+VAGI SDAN+L + R+ A+RY ++Y E I
Sbjct: 61 PSEKIYRRNDNMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVI 105
>gi|125811518|ref|XP_001361901.1| GA21704 [Drosophila pseudoobscura pseudoobscura]
gi|54637077|gb|EAL26480.1| GA21704 [Drosophila pseudoobscura pseudoobscura]
Length = 262
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 67/105 (63%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E T+KLL ++
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAI 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+Y++++++ C+VAGI SDAN+L R+ A+RY ++Y E I
Sbjct: 61 PSEKIYRLNENMVCSVAGITSDANVLTAELRLIAQRYQFSYGEVI 105
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 91 KDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLLEN 150
K + +EA LA+KVL T+D+T LT EK+E+A + + + V Y + + L+E
Sbjct: 182 KPSIKLEEAKDLAVKVLSMTLDTTKLTPEKVEMATLQRVKNTTV-YSVLDKPDVEKLIEK 240
Query: 151 FGVAQPASEVS 161
+ Q +E +
Sbjct: 241 YNKLQAETEAA 251
>gi|195170248|ref|XP_002025925.1| GL10139 [Drosophila persimilis]
gi|194110789|gb|EDW32832.1| GL10139 [Drosophila persimilis]
Length = 262
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 67/105 (63%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E T+KLL ++
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDSAI 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+Y++++++ C+VAGI SDAN+L R+ A+RY ++Y E I
Sbjct: 61 PSEKIYRLNENMVCSVAGITSDANVLTAELRLIAQRYQFSYGEVI 105
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 91 KDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLLEN 150
K + +EA LA+KVL T+D+T LT EK+E+A + + + V Y + + L+E
Sbjct: 182 KPSIKLEEAKDLAVKVLSMTLDTTKLTPEKVEMATLQRVNNTTV-YSVLDKPDVEKLIEK 240
Query: 151 FGVAQPASEVS 161
+ Q +E +
Sbjct: 241 YNKLQAETEAA 251
>gi|195382892|ref|XP_002050162.1| GJ21990 [Drosophila virilis]
gi|194144959|gb|EDW61355.1| GJ21990 [Drosophila virilis]
Length = 263
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 68/105 (64%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLVGENNV-------TSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L + V T+KLL +
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGIVLAAECRSTNKLLDNAI 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+Y++++++ C+VAGI SDAN+L + R+ A+RY ++Y E I
Sbjct: 61 PSEKIYRLNENMVCSVAGITSDANVLTSELRLIAQRYQFSYGEVI 105
>gi|225714226|gb|ACO12959.1| Proteasome subunit alpha type-4 [Lepeophtheirus salmonis]
gi|290561435|gb|ADD38118.1| Proteasome subunit alpha type-4 [Lepeophtheirus salmonis]
Length = 253
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRL+QV+Y G ++G E T+KLL
Sbjct: 1 MARRYDTRTTIFSPEGRLFQVEYAMEAIGHAGTVLGILATDGIVVAAERKNTNKLLDDVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+Y +++++ C+VAGI SDAN+L + R+ +RY Y Y PI
Sbjct: 61 HSEKIYSLNENMGCSVAGITSDANVLTHEMRLIGKRYEYVYGSPI 105
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 88 QDYKDD-MTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
Q+YK++ M E + LA+KVL KT+D T LT +K+E+A
Sbjct: 177 QEYKENEMNLNECLDLAIKVLTKTLDMTKLTPDKIEIA 214
>gi|339252808|ref|XP_003371627.1| multicatalytic endopeptidase [Trichinella spiralis]
gi|316968093|gb|EFV52428.1| multicatalytic endopeptidase [Trichinella spiralis]
Length = 307
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 18/101 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM--------GCL----------VGENNVTSKLLQTST 42
++RRYD +TT+FSPEGRLYQV+Y CL V EN +T+KLL
Sbjct: 44 LARRYDSRTTIFSPEGRLYQVEYAMEAINHAGTCLSLISKEGIIMVAENRITNKLLDDEA 103
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAY 83
+ EK+Y+++ + C+VAGI +DAN+L+ R QA++YA Y
Sbjct: 104 AQEKIYRLNSDIICSVAGITADANVLVAMLRQQAQKYAQEY 144
>gi|25143215|ref|NP_491520.2| Protein PAS-3 [Caenorhabditis elegans]
gi|12229924|sp|Q9N599.2|PSA4_CAEEL RecName: Full=Proteasome subunit alpha type-4; AltName:
Full=Proteasome subunit alpha 3
gi|351065066|emb|CCD66205.1| Protein PAS-3 [Caenorhabditis elegans]
Length = 250
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 64/108 (59%), Gaps = 20/108 (18%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLVGENNVTS-------KLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E V + KLL S
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSV 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE--PIQ 88
EK+Y++ D+++C VAGI +DANILIN R A Y +Y E P++
Sbjct: 61 MTEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVE 108
>gi|322801291|gb|EFZ21978.1| hypothetical protein SINV_09740 [Solenopsis invicta]
Length = 257
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTSTS 43
+RRYD +TT+FSPEGRLYQV+Y +G L E T+KLL
Sbjct: 2 ARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTCLGILANDGILLAAEKRNTNKLLDEVFF 61
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D + C+VAGI SDAN+L N R+ A+RY Y E I
Sbjct: 62 SEKIYKLNDDIVCSVAGITSDANVLTNELRLIAQRYLLQYGEAI 105
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
Q+YK+ + T ++A+ LA+KVL KT+D L++EK+E+A + +G+ K +I +
Sbjct: 177 QEYKEGETTLKDAMALAIKVLSKTLDMNKLSAEKVEMA-ILTRENGQTKTKILPANEVDA 235
Query: 147 LL 148
L+
Sbjct: 236 LI 237
>gi|291230768|ref|XP_002735337.1| PREDICTED: proteasome alpha 4 subunit-like [Saccoglossus
kowalevskii]
Length = 277
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 61/104 (58%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTSTS 43
+RRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 15 ARRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILASDGVLLAAERRNIHKLLDEVFF 74
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+ D +AC+VAGI SDAN+L N R+ A+RY YQE I
Sbjct: 75 SEKIYKLTDDMACSVAGITSDANVLTNELRLIAQRYLLQYQESI 118
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
Q+YK+ +M +E++ LA+K+L KT+D T LTSEK+E+A
Sbjct: 190 QEYKEGEMNMKESLSLAIKILNKTLDLTKLTSEKVEIA 227
>gi|388581891|gb|EIM22198.1| ATP-dependent DNA ligase [Wallemia sebi CBS 633.66]
Length = 943
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 65/106 (61%), Gaps = 19/106 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLL-QTS 41
M+RRYD +TT+FSPEGRLYQ++Y G +G E VTSKLL +
Sbjct: 1 MARRYDSRTTIFSPEGRLYQIEYAMEAISHAGTCIGILAQDGVVLAAEKRVTSKLLDKAE 60
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EK++ ++ ++ VAGI +DAN L+N AR+QA++Y Y Y + I
Sbjct: 61 ASNEKIFNLNSNILAGVAGITADANSLVNYARMQAQKYLYTYDDNI 106
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 86 PIQDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRICSPESL 144
P Q + + ++ AV+LA K+L KT+D+T++ S+K+E A + L P +G+ K I +
Sbjct: 191 PNQQDETEGSKCGAVELACKILGKTLDATTIDSDKVEFAILKLDPKTGEPKGHILKAPEI 250
Query: 145 TMLL 148
LL
Sbjct: 251 DKLL 254
>gi|432097273|gb|ELK27607.1| Proteasome subunit alpha type-4 [Myotis davidii]
Length = 289
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 61/102 (59%), Gaps = 18/102 (17%)
Query: 4 RYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTSTSAE 45
RYD +TT+FSPEGRLYQV+Y +G L E KLL +E
Sbjct: 32 RYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSE 91
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
K+YK+++ +AC+VAGI SDAN+L N R+ A+RY YQEPI
Sbjct: 92 KIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPI 133
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A SGK R+ + +
Sbjct: 205 QDYKEGEMTLKSALALAVKVLNKTMDVSKLSAEKVEIA-TLTRESGKTVIRVLKQKEVEQ 263
Query: 147 LLE 149
L++
Sbjct: 264 LIK 266
>gi|340780420|pdb|3OEU|B Chain B, Structure Of Yeast 20s Open-Gate Proteasome With
Compound 24
gi|340780434|pdb|3OEU|P Chain P, Structure Of Yeast 20s Open-Gate Proteasome With
Compound 24
gi|340780448|pdb|3OEV|B Chain B, Structure Of Yeast 20s Open-Gate Proteasome With
Compound 25
gi|340780462|pdb|3OEV|P Chain P, Structure Of Yeast 20s Open-Gate Proteasome With
Compound 25
gi|390980817|pdb|3SDI|B Chain B, Structure Of Yeast 20s Open-Gate Proteasome With
Compound 20
gi|390980831|pdb|3SDI|P Chain P, Structure Of Yeast 20s Open-Gate Proteasome With
Compound 20
gi|390980845|pdb|3SDK|B Chain B, Structure Of Yeast 20s Open-Gate Proteasome With
Compound 34
gi|390980859|pdb|3SDK|P Chain P, Structure Of Yeast 20s Open-Gate Proteasome With
Compound 34
Length = 235
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 58/96 (60%), Gaps = 18/96 (18%)
Query: 10 TVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTSAEKMYKID 51
T+FSPEGRLYQV+Y G +G E VTS LL+ TS EK+YK++
Sbjct: 1 TIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLN 60
Query: 52 DHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
D +A AVAG+ +DA ILINTAR+ A+ Y Y E I
Sbjct: 61 DKIAVAVAGLTADAEILINTARIHAQNYLKTYNEDI 96
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPS-GKVKYRICSPESLTML 147
DYKDDM +A++LALK L KT DS++LT ++LE A + + G+V +I P+ + +
Sbjct: 169 DYKDDMKVDDAIELALKTLSKTTDSSALTYDRLEFATIRKGANDGEVYQKIFKPQEIKDI 228
Query: 148 LENFGV 153
L G+
Sbjct: 229 LVKTGI 234
>gi|332029633|gb|EGI69522.1| Proteasome subunit alpha type-4 [Acromyrmex echinatior]
Length = 470
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTSTS 43
+RRYD +TT+FSPEGRLYQV+Y +G L E T+KLL
Sbjct: 215 ARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTCLGILANDGILLAAEKRNTNKLLDEVFF 274
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D + C+VAGI SDAN+L N R+ A+RY Y E I
Sbjct: 275 SEKIYKLNDDIVCSVAGITSDANVLTNELRLIAQRYLLQYGEAI 318
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
Q+YK+ + T ++A+ LA+KVL KT+D LT+EK+E+A + GK K +I +
Sbjct: 390 QEYKEGETTLKDAMALAIKVLSKTLDMNKLTAEKVEMA-ILTREDGKTKTKILPANEVNA 448
Query: 147 LL 148
L+
Sbjct: 449 LI 450
>gi|342182071|emb|CCC91550.1| putative proteasome alpha 3 subunit [Trypanosoma congolense IL3000]
Length = 286
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 63/111 (56%), Gaps = 24/111 (21%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQT-- 40
MS RYD +TT FSPEGRLYQV+Y G ++G E L T
Sbjct: 1 MSSRYDSRTTTFSPEGRLYQVEYAEEAISQAGSVIGILTTGGVVLGAERGQQFSLFDTEI 60
Query: 41 ----STSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ S EK++KI +H+ C+VAG+ SDA L+N AR+ A R+ Y++QEPI
Sbjct: 61 MEDRNISGEKVFKIANHIGCSVAGVTSDAYALLNYARLSASRHFYSFQEPI 111
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 37/60 (61%), Gaps = 9/60 (15%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
+D+K ++T +E + L L+VL K+MD+ L E+LE+A + +R+ +P + T+L
Sbjct: 183 RDWKPELTLEEGIVLCLRVLGKSMDAIKLLPERLEVA---------ILHRVPAPATETIL 233
>gi|164661205|ref|XP_001731725.1| hypothetical protein MGL_0993 [Malassezia globosa CBS 7966]
gi|159105626|gb|EDP44511.1| hypothetical protein MGL_0993 [Malassezia globosa CBS 7966]
Length = 256
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT FSPEGRLYQV+Y G ++G E VTSKLL+
Sbjct: 1 MSRRYDSRTTTFSPEGRLYQVEYAMEAISHAGTVLGILASDGVVLAAEKKVTSKLLEQDK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S+EK++++ +V VAG+ +DAN L+N AR A++Y +Y E I
Sbjct: 61 SSEKIFQLSGNVLSGVAGMTADANSLVNYARNAAQKYLLSYDEDI 105
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRICSPESLTM 146
Q+YKD MT ++A+ LA +VL KTMD+TS+ S+KLE A + + + + I SP +
Sbjct: 177 QEYKDTMTVKDALGLAARVLSKTMDTTSMESDKLEFAVLKRNERTDEPQPYILSPSDIDR 236
Query: 147 LLENFGVAQPASEVS 161
+L+ +A+PA + S
Sbjct: 237 VLQLHNLAKPADDAS 251
>gi|71008188|ref|XP_758193.1| hypothetical protein UM02046.1 [Ustilago maydis 521]
gi|46097865|gb|EAK83098.1| hypothetical protein UM02046.1 [Ustilago maydis 521]
Length = 272
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 67/119 (56%), Gaps = 25/119 (21%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT FSPEGRLYQV+Y G ++G E VTSKLL+
Sbjct: 1 MSRRYDSRTTTFSPEGRLYQVEYAMEAISHAGTVIGILAKDGIVLAAEKKVTSKLLEQDQ 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQ 101
S+EK++ + D+V VAG +DAN L+N AR A++Y + Y DDM ++ Q
Sbjct: 61 SSEKIFAVSDNVMAGVAGYTADANSLVNFARNAAQQY-------LASYDDDMPVEQLAQ 112
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFL-LPSGKVKYRICSPESLTM 146
QDYKDD+ Q+A+ +A+K+L KTMDSTSL SEKLE A + L +G+ + I P +
Sbjct: 177 QDYKDDLGIQDAMAMAVKILSKTMDSTSLDSEKLEFATLTLNAKTGQPQTNIFKPNDIDR 236
Query: 147 LLENFGVAQPASE 159
LL G+A+P E
Sbjct: 237 LLHKHGLAKPKDE 249
>gi|343429011|emb|CBQ72585.1| probable PRE9-20S proteasome subunit Y13 (alpha3) [Sporisorium
reilianum SRZ2]
Length = 271
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 67/119 (56%), Gaps = 25/119 (21%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT FSPEGRLYQV+Y G ++G E VTSKLL+
Sbjct: 1 MSRRYDSRTTTFSPEGRLYQVEYAMEAISHAGTVIGILAKDGIVLAAEKKVTSKLLEQDQ 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQ 101
S+EK++ + D+V VAG +DAN L+N AR A++Y + Y DDM ++ Q
Sbjct: 61 SSEKIFTVSDNVMAGVAGYTADANSLVNFARNAAQQY-------LASYDDDMPVEQLAQ 112
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFL-LPSGKVKYRICSPESLTM 146
QDYKDD+ Q+A+ +A+K+L KTMDSTSL SEKLE A + L +GK + I P +
Sbjct: 177 QDYKDDLGIQDAMGMAVKILSKTMDSTSLDSEKLEFATLTLNGKTGKPQTNIFRPNDIDR 236
Query: 147 LLENFGVAQ 155
LL G+A+
Sbjct: 237 LLHKHGLAK 245
>gi|156552814|ref|XP_001600177.1| PREDICTED: proteasome subunit alpha type-4-like [Nasonia
vitripennis]
Length = 257
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 62/105 (59%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E T+KLL
Sbjct: 1 MARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTCLGILANDGILLAAEKRNTNKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK+++ V C+VAGI SDAN+L N R+ +RY Y E I
Sbjct: 61 FSEKIYKLNEDVVCSVAGITSDANVLTNELRLIGQRYLLQYGETI 105
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
Q+YK+ +MT ++A+ LA+KV+ KT+D L+++K+E+A GK K RI +
Sbjct: 177 QEYKEGEMTLKDAMALAIKVMSKTLDMNKLSADKVEMA-TLTRADGKTKTRILPANEVEA 235
Query: 147 LL 148
L+
Sbjct: 236 LI 237
>gi|351697663|gb|EHB00582.1| Proteasome subunit alpha type-4 [Heterocephalus glaber]
Length = 178
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 90/167 (53%), Gaps = 32/167 (19%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLVGENNVTS-------KLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L + + + +LL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEATGHAGTCLGILANDGVLLAAKRHNIHQLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKD-DMTRQEAVQ 101
+EK+YK+++ +AC+VA I N A A QDYK+ +MT + +
Sbjct: 61 FSEKIYKLNEDMACSVAAICIGNN------------SAAAVSVLKQDYKEGEMTLKSVLG 108
Query: 102 LALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
LA+KVL KTMD + L++EK+E+A +GK+ R+ + + L+
Sbjct: 109 LAIKVLNKTMDVSKLSAEKVEIA-TLTRETGKMVIRVLKQKEVEQLI 154
>gi|340384350|ref|XP_003390676.1| PREDICTED: proteasome subunit alpha type-4-like [Amphimedon
queenslandica]
Length = 263
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 64/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E T+KLL
Sbjct: 1 MARRYDTKTTIFSPEGRLYQVEYAMEAIGHAGTCLGILAKDGVLLAAERKNTNKLLDDVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+Y++ D++AC+VAGI SDAN+L N R A++Y Y+E +
Sbjct: 61 LSEKIYRLHDNMACSVAGITSDANVLTNYLRQTAQKYELVYKEAM 105
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 9/56 (16%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAE---------VFLLPSGKV 134
Q+YKDD+ ++ + LA+KVL KT+DST L SEK+E A + +LPSG+V
Sbjct: 177 QEYKDDIDLKDGLDLAVKVLHKTLDSTKLNSEKVEFATLTRKDGRTVIEVLPSGEV 232
>gi|195455623|ref|XP_002074799.1| GK22956 [Drosophila willistoni]
gi|194170884|gb|EDW85785.1| GK22956 [Drosophila willistoni]
Length = 262
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E T+KLL +
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAEDGILLAAECRSTNKLLDNAI 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+Y++++++ C+VAGI +DAN+L R+ A+RY ++Y E I
Sbjct: 61 PSEKIYRLNENMVCSVAGITADANVLTAELRLIAQRYQFSYGEVI 105
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 91 KDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
K+++ +EA LA+KVL T+D+T LT EK+E+A
Sbjct: 182 KENIKLEEAKDLAVKVLSMTLDTTKLTPEKVEMA 215
>gi|308474035|ref|XP_003099240.1| CRE-PAS-3 protein [Caenorhabditis remanei]
gi|308267543|gb|EFP11496.1| CRE-PAS-3 protein [Caenorhabditis remanei]
Length = 250
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 64/108 (59%), Gaps = 20/108 (18%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLVGENNVTS-------KLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L + V + KLL S
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILASDGIVIAAERKNVHKLLDDSV 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE--PIQ 88
EK+Y++ D+++C VAGI +DANILIN R A Y +Y E P++
Sbjct: 61 LTEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVE 108
>gi|341891846|gb|EGT47781.1| hypothetical protein CAEBREN_13617 [Caenorhabditis brenneri]
gi|341898373|gb|EGT54308.1| CBN-PAS-3 protein [Caenorhabditis brenneri]
Length = 250
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 64/108 (59%), Gaps = 20/108 (18%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLVGENNVTS-------KLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L + V + KLL S
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILASDGIVIAAERKNVHKLLDDSV 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE--PIQ 88
EK+Y++ D+++C VAGI +DANILIN R A Y +Y E P++
Sbjct: 61 LTEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVE 108
>gi|443894875|dbj|GAC72222.1| translation initiation factor 3, subunit a [Pseudozyma antarctica
T-34]
Length = 706
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 66/119 (55%), Gaps = 25/119 (21%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSRRYD +TT FSPEGRLYQV+Y G ++G E VTSKLL+
Sbjct: 437 MSRRYDSRTTTFSPEGRLYQVEYAMEAISHAGTVIGILAKDGIVLAAEKKVTSKLLEQDQ 496
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQ 101
S+EK++ + D+V VAG +DAN L+N AR A Q+ + Y DDM ++ Q
Sbjct: 497 SSEKIFTVSDNVMAGVAGYTADANSLVNYAR-------NAAQQHLASYDDDMPVEQLAQ 548
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRICSPESLTM 146
QDYKDD+ Q+A+ +A+K+L KTMDSTSL SEKLE A + L P + K + I P +
Sbjct: 613 QDYKDDIGIQDAMAMAVKILSKTMDSTSLDSEKLEFATLTLNPTTHKPQTNIFKPNDIDR 672
Query: 147 LLENFGVAQP 156
LL+ G+A+P
Sbjct: 673 LLQKHGLAKP 682
>gi|268567424|ref|XP_002639985.1| C. briggsae CBR-PAS-3 protein [Caenorhabditis briggsae]
Length = 250
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 64/108 (59%), Gaps = 20/108 (18%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLVGENNVTS-------KLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L + V + KLL S
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILASDGIVIAAERKNVHKLLDDSV 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE--PIQ 88
EK+Y++ D+++C VAGI +DANILIN R A Y +Y E P++
Sbjct: 61 LTEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVE 108
>gi|115767142|ref|XP_786996.2| PREDICTED: proteasome subunit alpha type-4-like [Strongylocentrotus
purpuratus]
Length = 257
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 62/105 (59%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E T KLL
Sbjct: 1 MSRRYDSKTTIFSPEGRLYQVEYAMEAIGHAGTSLGILASDGVLLAAERRNTHKLLDDVV 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K+YK++ +AC+V+GI SDAN+L + R+ +RY YQE I
Sbjct: 61 FSDKIYKLNSDMACSVSGITSDANVLTSELRLAGQRYFLQYQENI 105
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
Q+YK+ D + A+ LA+KVL KT+D T +T EK+E+A + GK K RI E L
Sbjct: 177 QEYKEGDTDLKGALALAVKVLSKTLDMTKVTPEKIEIASL-TREDGKTKIRILPVEELQK 235
Query: 147 LL 148
L+
Sbjct: 236 LI 237
>gi|402582940|gb|EJW76885.1| proteasome subunit beta type, partial [Wuchereria bancrofti]
Length = 168
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 59/104 (56%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTSTS 43
+RRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 ARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTCLGILASDGILIAAEKRNVHKLLDDEVL 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
EK+Y++ D++AC VAGI +DANILIN R A Y Y+Y E I
Sbjct: 61 TEKIYRLADNIACTVAGITADANILINHLRFWAADYKYSYGEHI 104
>gi|328793299|ref|XP_397196.4| PREDICTED: hypothetical protein LOC413757 [Apis mellifera]
Length = 622
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 18/104 (17%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTSTS 43
+RRYD +TT+FSPEGRLYQV+Y +G L V E +KLL
Sbjct: 367 ARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTCLGILATNGILLVAERRNINKLLDEVYY 426
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D + C+VAGI SDAN+L N R+ A+RY Y EPI
Sbjct: 427 SEKIYKLNDDIVCSVAGITSDANVLTNELRLIAQRYLLQYGEPI 470
>gi|67480423|ref|XP_655561.1| proteasome alpha subunit [Entamoeba histolytica HM-1:IMSS]
gi|56472713|gb|EAL50177.1| proteasome alpha subunit, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449702243|gb|EMD42919.1| proteasome alpha subunit, putative [Entamoeba histolytica KU27]
Length = 249
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 64/108 (59%), Gaps = 20/108 (18%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L + ++L+ S
Sbjct: 1 MARRYDSRTTMFSPEGRLYQVEYAMEAISHSSSAIGILATDGILLAAKKKRVARLVDRSK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTAR--VQARRYAYAYQEPIQ 88
A+KMY++D+H+ACA AGI SD NIL++ R Q R+ Y + P++
Sbjct: 61 GADKMYELDEHIACAAAGITSDTNILVDYLRDVCQQHRFTYGEEIPVE 108
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
+YKDD+T +EA +LA+K+ K+++S+S+ KLE L K +++ +++LL
Sbjct: 178 EYKDDITLEEAKKLAVKIFSKSVESSSMVPSKLEFGIFKLDNQNKPSFKVMKDREVSVLL 237
Query: 149 ENFGVAQ 155
+ G+ Q
Sbjct: 238 KECGIEQ 244
>gi|167382545|ref|XP_001736156.1| proteasome subunit alpha type-4 [Entamoeba dispar SAW760]
gi|167387931|ref|XP_001738368.1| proteasome subunit alpha type-4 [Entamoeba dispar SAW760]
gi|165898463|gb|EDR25311.1| proteasome subunit alpha type-4, putative [Entamoeba dispar SAW760]
gi|165901595|gb|EDR27673.1| proteasome subunit alpha type-4, putative [Entamoeba dispar SAW760]
Length = 249
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 64/108 (59%), Gaps = 20/108 (18%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L + ++L+ S
Sbjct: 1 MARRYDSRTTMFSPEGRLYQVEYAMEAISHSSSAIGILATDGILLAAKKKRVARLVDRSK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTAR--VQARRYAYAYQEPIQ 88
A+KMY++D+H+ACA AGI SD NIL++ R Q R+ Y + P++
Sbjct: 61 GADKMYELDEHIACAAAGITSDTNILVDYLRDVCQQHRFTYGEEIPVE 108
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
+YKDD+T +EA +LA+K+ K+++S+S+ KLE L K +++ +++LL
Sbjct: 178 EYKDDITLEEAKKLAVKIFSKSVESSSMVPSKLEFGIFKLDNQNKPSFKVMKDREVSVLL 237
Query: 149 ENFGVAQ 155
+ G+ Q
Sbjct: 238 KECGIEQ 244
>gi|308799916|ref|XP_003074739.1| Pac1 Proteasome subunit alpha type 4 (IC) [Ostreococcus tauri]
gi|119358782|emb|CAL51997.2| Pac1 Proteasome subunit alpha type 4 (IC), partial [Ostreococcus
tauri]
Length = 228
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 60/102 (58%), Gaps = 18/102 (17%)
Query: 4 RYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTSAE 45
RYD +TT FSPEGRL+QV+Y G VG E SKLL+ S++ E
Sbjct: 1 RYDSRTTTFSPEGRLFQVEYALESVNHAGTCVGLRTNTGVLLASEKKTMSKLLEQSSTPE 60
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
K++KID H+ AVAG+ +DA IL+N AR+ A +Y Y PI
Sbjct: 61 KLWKIDKHIVIAVAGLNADAMILVNFARLVAGQYKARYGLPI 102
>gi|20093823|ref|NP_613670.1| proteasome subunit alpha [Methanopyrus kandleri AV19]
gi|23821987|sp|Q8TYB7.1|PSA_METKA RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|19886746|gb|AAM01600.1| Protease subunit of the proteasome [Methanopyrus kandleri AV19]
Length = 246
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y G ++G + VTSKL++ S EK
Sbjct: 10 YDRAITVFSPDGRLFQVEYAREAVKRGTTALGIKVEEGVVLGVDKRVTSKLIEPE-SIEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+Y+ID H+ A AG+++DA +L+ AR++A+ Y Y Y EPI
Sbjct: 69 VYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPI 109
>gi|9623020|gb|AAF90007.1| 20S proteasome alpha 3 subunit [Acanthamoeba castellanii]
Length = 104
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 48/61 (78%)
Query: 27 LVGENNVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
L E + SKLL+ +EKMY+IDDH+ACAVAGI +DANIL+N +R+ A+RY +AYQEP
Sbjct: 21 LACEKKIASKLLEPGKRSEKMYRIDDHIACAVAGITADANILLNFSRLAAQRYLFAYQEP 80
Query: 87 I 87
+
Sbjct: 81 V 81
>gi|353236269|emb|CCA68267.1| probable PRE9-20S proteasome subunit Y13 (alpha3) [Piriformospora
indica DSM 11827]
Length = 262
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 26/113 (23%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQ++Y G ++G E VT KLL S
Sbjct: 1 MARRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLASDGVVLAAEKKVTGKLLDLSV 60
Query: 43 --------SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EK+Y + D+V VAG+ +DAN L+N AR A+R+ + + E I
Sbjct: 61 TKDGGYGGSGEKIYLLTDNVVVGVAGLTADANSLVNYARTAAQRHLFTFNEDI 113
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRICSPESLTM 146
Q+YK+D+ ++A+ L +KV+ KTMDST+L SEKLE A + L P + K K +I P +
Sbjct: 185 QEYKEDIKVEDAIGLVMKVMSKTMDSTTLGSEKLEFATLTLDPTTKKPKAKIYRPAEVDA 244
Query: 147 LLENFGVAQ 155
LL+ + +
Sbjct: 245 LLQKHDLGK 253
>gi|239788585|dbj|BAH70965.1| ACYPI006981 [Acyrthosiphon pisum]
Length = 271
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 61/105 (58%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM--------GCL----------VGENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y CL E +KLL +
Sbjct: 1 MARRYDTRTTIFSPEGRLYQVEYAIEAISHAGACLGILTNDGVLLAAEKRNVNKLLDETC 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D + C+VAGI +DAN+L++ R + RY Y + I
Sbjct: 61 GSEKIYKLNDDMVCSVAGITADANVLVSELRSISERYRMQYGDSI 105
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Query: 89 DYKDD-MTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
+YK+ MT EA +LA+K+L KT+D+T LT++K+E+
Sbjct: 178 EYKEGQMTLDEAKKLAVKILSKTLDATKLTADKVEMG 214
>gi|193666831|ref|XP_001943723.1| PREDICTED: proteasome subunit alpha type-4-like [Acyrthosiphon
pisum]
Length = 271
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 62/105 (59%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E +KLL +
Sbjct: 1 MARRYDTRTTIFSPEGRLYQVEYAIEAISHAGTCLGILTNDGVLLAAEKRNVNKLLDETC 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D + C+VAGI +DAN+L++ R + RY Y + I
Sbjct: 61 GSEKIYKLNDDMVCSVAGITADANVLVSELRSISERYRMQYGDSI 105
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 30/37 (81%), Gaps = 1/37 (2%)
Query: 89 DYKDD-MTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
+YK+ MT EA +LA+K+L KT+D+T LT++K+E+A
Sbjct: 178 EYKEGQMTLDEAKKLAVKILSKTLDATKLTADKVEMA 214
>gi|240848541|ref|NP_001155462.1| proteasome alpha 4 subunit-like [Acyrthosiphon pisum]
gi|239788330|dbj|BAH70853.1| ACYPI002153 [Acyrthosiphon pisum]
Length = 272
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 62/105 (59%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E +KLL +
Sbjct: 1 MARRYDTRTTIFSPEGRLYQVEYAIEAISHAGTCLGILTNDGVLLAAEKRNVNKLLDETC 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+YK++D + C+VAGI +DAN+L++ R + RY Y + I
Sbjct: 61 GSEKIYKLNDDMVCSVAGITADANVLVSELRSISERYRMQYGDSI 105
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 30/37 (81%), Gaps = 1/37 (2%)
Query: 89 DYKDD-MTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
+YK+ MT EA +LA+K+L KT+D+T LT++K+E+A
Sbjct: 178 EYKEGQMTLDEAKKLAVKILSKTLDATKLTADKVEMA 214
>gi|226358649|gb|ACO51177.1| proteasome (prosome, macropain) subunit alpha type 4
[Hypophthalmichthys nobilis]
Length = 97
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 59/97 (60%), Gaps = 18/97 (18%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
MSRRYD +TT+FSPEGRLYQV+Y +G L E KLL
Sbjct: 1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRY 79
+EK+YK+++ +AC+VAGI SDAN+L N R+ A+RY
Sbjct: 61 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRY 97
>gi|321456911|gb|EFX68008.1| hypothetical protein DAPPUDRAFT_231772 [Daphnia pulex]
Length = 257
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 63/105 (60%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLVGENNV-------TSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L + V T+KLL
Sbjct: 1 MARRYDTRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILASDGIVLAAERRNTNKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+Y+++ + C+VAGI SDAN+L N R+ ++RY Y E I
Sbjct: 61 FSEKIYQLNADMVCSVAGITSDANVLTNELRLISQRYLLQYGESI 105
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 10/61 (16%)
Query: 88 QDYKDDMTR-QEAVQLALKVLRKTMDSTSLTSEKLELAE---------VFLLPSGKVKYR 137
Q+YK+ T +EA+ LA++V+ KTMD+T LT +KLELA + +LP +VK
Sbjct: 177 QEYKEGETNLEEALALAIRVMSKTMDATKLTPDKLELATLTRHDNKTFIKVLPVAQVKAL 236
Query: 138 I 138
I
Sbjct: 237 I 237
>gi|255938979|ref|XP_002560259.1| Pc15g00320 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584881|emb|CAP82918.1| Pc15g00320 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 246
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 22/138 (15%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E VTS LL+ S S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSTLLEAS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID H+ CA++G+ +DA L+ ARV+ + +A+ Y EP+ + + T Q LAL+
Sbjct: 67 IVEIDQHIGCAMSGLQADARNLVEHARVECQNHAFHYAEPL---RVESTTQAICDLALRF 123
Query: 107 LRKTMDSTSLTSEKLELA 124
D S+ S +A
Sbjct: 124 GESGDDEESVMSRPFGVA 141
>gi|392569475|gb|EIW62648.1| N-terminal nucleophile aminohydrolase [Trametes versicolor
FP-101664 SS1]
Length = 268
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 26/113 (23%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-------MGCLVG-----------ENNVTSKLLQTS- 41
M+RRYD +TT+FSPEGRLYQ++Y G ++G E VT KLL S
Sbjct: 1 MARRYDSRTTIFSPEGRLYQIEYAMEAISHAGIVIGVLSKDGVVLAAEKKVTGKLLDMSG 60
Query: 42 -------TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EK++ ++ +V VAGI +DAN L+N AR A+R+ ++Y E I
Sbjct: 61 ATGGSYGGSGEKIFLLNSNVISGVAGITADANSLVNYARQAAQRHLFSYNEDI 113
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 48/68 (70%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D++ ++A++L LKV+ KTMDST+L SEKLE A + L S + K +I +P + L
Sbjct: 185 QDYKEDISVEDAIELVLKVMSKTMDSTTLGSEKLEFATLTLDASKQPKAKIYNPAEIDAL 244
Query: 148 LENFGVAQ 155
L+ G+ +
Sbjct: 245 LQKHGLGK 252
>gi|425781146|gb|EKV19128.1| Proteasome component Pup2, putative [Penicillium digitatum PHI26]
gi|425783177|gb|EKV21037.1| Proteasome component Pup2, putative [Penicillium digitatum Pd1]
Length = 246
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 22/138 (15%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E VTS LL+ S S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSTLLEAS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID H+ CA++G+ +DA L+ ARV+ + +A+ Y EP+ + + T Q LAL+
Sbjct: 67 IVEIDQHIGCAMSGLQADARNLVEHARVECQNHAFHYAEPL---RVESTTQAICDLALRF 123
Query: 107 LRKTMDSTSLTSEKLELA 124
D S+ S +A
Sbjct: 124 GESGDDEESVMSRPFGVA 141
>gi|389739970|gb|EIM81162.1| proteasome subunit alpha type 4 [Stereum hirsutum FP-91666 SS1]
Length = 262
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 26/113 (23%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
M RRYD +TT+FSPEGRLYQ++Y G ++G E VT KLL S
Sbjct: 1 MVRRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKVTGKLLDQSA 60
Query: 43 --------SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EK++ ++ +V VAG+ +DAN LIN AR ++R+ ++Y EPI
Sbjct: 61 EKDGGYGGSGEKIFLLNSNVLGGVAGLTADANSLINYARQASQRHLFSYNEPI 113
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRICSPESLTM 146
Q+YKDD+T +EAV L ++ + KTMDST+L SEKLE A + L P +G+ K +I P +
Sbjct: 185 QEYKDDITVEEAVGLVMRTMSKTMDSTTLGSEKLEFATLTLDPTTGQPKAKIYKPAEVDA 244
Query: 147 LLE 149
LL+
Sbjct: 245 LLQ 247
>gi|449540116|gb|EMD31112.1| hypothetical protein CERSUDRAFT_120085 [Ceriporiopsis subvermispora
B]
Length = 242
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 73/138 (52%), Gaps = 22/138 (15%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E V S LL++S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTTVGVRTPEGVVLGVEKRVQSPLLESS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID H+ CA++G+ +DA +++ ARV A+ +A+ Y EPI + + Q LAL+
Sbjct: 67 IMEIDTHLGCAMSGLTADARTMVDHARVTAQNHAFTYDEPI---RVESATQAVCDLALRF 123
Query: 107 LRKTMDSTSLTSEKLELA 124
D +L S +A
Sbjct: 124 GESVHDEEALMSRPFGVA 141
>gi|212223172|ref|YP_002306408.1| proteasome subunit alpha [Thermococcus onnurineus NA1]
gi|229598016|sp|B6YSH9.1|PSA_THEON RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|212008129|gb|ACJ15511.1| Proteasome alpha subunit [Thermococcus onnurineus NA1]
Length = 260
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 64/101 (63%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L E +TSKL++ S S EK
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKEGVVLAVEKRITSKLIEPS-SYEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++IDDH+A A +GI++DA +L++ AR++A+ Y Y EP+
Sbjct: 69 IFQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPV 109
>gi|189196042|ref|XP_001934359.1| proteasome subunit alpha type-5 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187980238|gb|EDU46864.1| proteasome subunit alpha type-5 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 245
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 62/102 (60%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E VTS LL+TS S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATGEGVILGVEKRVTSTLLETS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA +I ARV+++ +A+ Y EP++
Sbjct: 67 IVEIDHHIGCAMSGLQADARSMIEHARVESQNHAFNYAEPLR 108
>gi|341582111|ref|YP_004762603.1| proteasome subunit alpha [Thermococcus sp. 4557]
gi|340809769|gb|AEK72926.1| proteasome subunit alpha [Thermococcus sp. 4557]
Length = 260
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 64/101 (63%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L E +TSKL++ S S EK
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKNGVVLAVEKRITSKLIEPS-SYEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++IDDH+A A +GI++DA +L++ AR++A+ Y Y EP+
Sbjct: 69 IFQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPV 109
>gi|407926751|gb|EKG19711.1| Proteasome alpha-subunit conserved site [Macrophomina phaseolina
MS6]
Length = 245
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 62/102 (60%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E VTS LL+TS S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATGEGVILGVEKRVTSTLLETS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA +I ARV+++ +A+ Y EP++
Sbjct: 67 IVEIDRHIGCAMSGLQADARSMIEHARVESQNHAFHYNEPLR 108
>gi|242012576|ref|XP_002427007.1| proteasome subunit alpha type, putative [Pediculus humanus
corporis]
gi|212511245|gb|EEB14269.1| proteasome subunit alpha type, putative [Pediculus humanus
corporis]
Length = 294
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 62/105 (59%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQV+Y +G L E +KLL
Sbjct: 1 MARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTCLGILAKDGILLAAEKRNINKLLDEVV 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+EK+Y++++++ C+VAGI SDAN+L R+ A+RY Y E I
Sbjct: 61 FSEKIYQLNENMVCSVAGITSDANVLTGELRMIAQRYLLQYGESI 105
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 12/60 (20%)
Query: 88 QDYKDD-MTRQEAVQLALKVLRKTMDSTSLTSEKLELA-----------EVFLLPSGKVK 135
Q+YK++ T ++A LA+KVL KT+D LT EK+E+A E+ +LP+ +V+
Sbjct: 177 QEYKENETTLKDAQALAIKVLSKTLDMAKLTPEKVEMATLVHNESSKKTEIRILPAKEVE 236
>gi|403374428|gb|EJY87164.1| Proteasome subunit alpha putative [Oxytricha trifallax]
Length = 251
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLV-------GENNVTSKLLQTST 42
M+ RYDR+TT F+P+GRL QV+Y +G L E SKL +
Sbjct: 1 MASRYDRKTTTFNPDGRLLQVEYAIEHINQDASVIGVLARDGVVLAAEKKEVSKLFIPTK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ K+YK+D+H+ +V+G+++DAN LI+ R+Q +R+ Y++ EP
Sbjct: 61 ESGKLYKMDEHILVSVSGVVADANFLIDYGRLQCQRHLYSHHEPF 105
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
DY D + EA+ LA+KVL K+MD+TS K E+ V G V R E L +L
Sbjct: 178 DYTQDCSLSEALILAVKVLAKSMDTTSPDVNKFEIQVVQKDDLGHVTQRKVEGEELKRIL 237
Query: 149 E 149
E
Sbjct: 238 E 238
>gi|330923591|ref|XP_003300298.1| hypothetical protein PTT_11507 [Pyrenophora teres f. teres 0-1]
gi|311325635|gb|EFQ91609.1| hypothetical protein PTT_11507 [Pyrenophora teres f. teres 0-1]
Length = 271
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 62/102 (60%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E VTS LL+TS S EK
Sbjct: 34 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATGEGVILGVEKRVTSTLLETS-SVEK 92
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA +I ARV+++ +A+ Y EP++
Sbjct: 93 IVEIDHHIGCAMSGLQADARSMIEHARVESQNHAFNYAEPLR 134
>gi|451846576|gb|EMD59885.1| hypothetical protein COCSADRAFT_40361 [Cochliobolus sativus ND90Pr]
gi|451994786|gb|EMD87255.1| hypothetical protein COCHEDRAFT_1023453 [Cochliobolus
heterostrophus C5]
Length = 245
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 62/102 (60%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E VTS LL+TS S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATGEGVILGVEKRVTSTLLETS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA +I ARV+++ +A+ Y EP++
Sbjct: 67 IVEIDRHIGCAMSGLQADARSMIEHARVESQNHAFNYAEPLR 108
>gi|340501332|gb|EGR28129.1| proteasome subunit, putative [Ichthyophthirius multifiliis]
Length = 252
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 61/101 (60%), Gaps = 18/101 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLVGENNV-------TSKLLQTST 42
MSRRYD++TT F+ EG+L QV Y +G L E S LL+ S
Sbjct: 1 MSRRYDQKTTTFNKEGKLLQVQYAIEAINKTGSAIGILTKEGIALATEKLDVSFLLEASK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAY 83
++EK++ +D+H+ V G+ +DAN LI+TARV+A+RY YAY
Sbjct: 61 TSEKIFAVDNHLYAVVNGLTADANYLIDTARVEAQRYKYAY 101
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRICSPESLTML 147
+YK+ ++ +E LALK L KTMD+ S +++K+E+ + + S +VK + S + L
Sbjct: 179 EYKETLSLKEGTNLALKALVKTMDTASPSAKKIEVVVISMNERSKQVKGKSYSEGEIEQL 238
Query: 148 LENFG 152
L++ G
Sbjct: 239 LKDNG 243
>gi|331237887|ref|XP_003331600.1| proteasome subunit alpha type-5 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309310590|gb|EFP87181.1| proteasome subunit alpha type-5 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 262
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 22/138 (15%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E SKLL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTTIAATTKEGVILGVERRSQSKLLEAS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID HV CAV+G+++D+ ++ ARV + + + + EPI K + Q LAL+
Sbjct: 67 IMEIDSHVGCAVSGLVADSRTMVEHARVVGQNHRFTFDEPI---KTESVTQAVCDLALRF 123
Query: 107 LRKTMDSTSLTSEKLELA 124
T D ++ S +A
Sbjct: 124 GESTHDEDAMMSRPFGVA 141
>gi|402224083|gb|EJU04146.1| N-terminal nucleophile aminohydrolase [Dacryopinax sp. DJM-731 SS1]
Length = 272
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 26/113 (23%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-------MGCLVG-----------ENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQ++Y G ++G E VT KLL S
Sbjct: 1 MARRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLATDGVVLAAEKKVTGKLLDLSV 60
Query: 43 --------SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EK++ ++ +V VAG+ +DAN LIN AR A+R+ ++Y E I
Sbjct: 61 AKEGGYGGSGEKIFLLNTNVIAGVAGLTADANSLINYARSAAQRHLFSYNEDI 113
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKY-RICSPESLTM 146
Q+YKD + ++A+ L L+ + KTMDSTSL+SEKLE A + + P K +I P +
Sbjct: 185 QEYKDTIGLEDAIGLVLRTMSKTMDSTSLSSEKLEFATLTIDPQTKRPIAKIYRPAEVDA 244
Query: 147 LLENFGVAQ 155
LL G+A+
Sbjct: 245 LLSKHGLAK 253
>gi|440294109|gb|ELP87130.1| proteasome subunit alpha type-4, putative [Entamoeba invadens IP1]
Length = 250
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 62/105 (59%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLVGENNV-------TSKLLQTST 42
M+RRYD TT+FSPEGRLYQV+Y +G L + + ++L+ S
Sbjct: 1 MARRYDSLTTMFSPEGRLYQVEYAMEAISHSSSAIGILCKDGILLAAKKKRVARLIDRSR 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++KMY++D HVACA AGI SD NIL++ R +++ + Y E I
Sbjct: 61 DSDKMYELDTHVACAAAGITSDTNILVDYLREVCQQHHFTYGEEI 105
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVK--YRICSPESLTM 146
+YK+DMT ++A +L +K+ K+++S+S+ +LE VF L K ++I +
Sbjct: 178 EYKEDMTIEDAKKLVVKIFSKSVESSSMVPSRLEFG-VFTLDENNKKPAFKIMKDAQVAE 236
Query: 147 LLENFGV 153
LL+ G+
Sbjct: 237 LLKQCGI 243
>gi|449546689|gb|EMD37658.1| 20S proteasome subunit [Ceriporiopsis subvermispora B]
Length = 261
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 26/113 (23%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-------MGCLVG-----------ENNVTSKLLQTS- 41
M+RRYD +TT+FSPEGRLYQ++Y G ++G E VT KLL S
Sbjct: 1 MARRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKVTGKLLDLSG 60
Query: 42 -------TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EK++ ++ +V VAGI +DAN L+N AR A+R+ + Y E I
Sbjct: 61 VKEGGYGGSGEKIFLLNSNVVAGVAGITADANSLVNFARQAAQRHLFLYNEDI 113
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGK-VKYRICSPESLTM 146
Q+Y++DM ++AV L L+V+ KTMDST+L SEKLE A + L + K K +I P +
Sbjct: 185 QEYREDMGVEDAVGLVLRVMSKTMDSTTLGSEKLEFATLTLDTATKQPKAKIYKPAEVDA 244
Query: 147 LLENFGVAQ 155
LL+ G+A+
Sbjct: 245 LLQKHGLAK 253
>gi|242399329|ref|YP_002994753.1| Proteasome subunit alpha [Thermococcus sibiricus MM 739]
gi|259535090|sp|C6A459.1|PSA_THESM RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|242265722|gb|ACS90404.1| Proteasome subunit alpha [Thermococcus sibiricus MM 739]
Length = 260
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGC-----LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV Y + C L E VTSKL++ S EK
Sbjct: 10 YDRAITVFSPDGRLFQVQYAREAVKRGATAVGVKCKDGVVLAVEKRVTSKLIEPE-SYEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++IDDH+A A +GI++DA +L++ AR++A+ Y Y EP+
Sbjct: 69 IFQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPV 109
>gi|358369367|dbj|GAA85982.1| proteasome component Y13 [Aspergillus kawachii IFO 4308]
Length = 254
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 19/99 (19%)
Query: 7 RQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEKMY 48
R +F PEGRLYQV+Y +G L E VTSKLL+ TSAEK+Y
Sbjct: 7 RHYHLF-PEGRLYQVEYALEAISHAGTALGILAKDGIVLAAEKKVTSKLLEQDTSAEKLY 65
Query: 49 KIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++D++ CAVAG+ +DANILIN AR A+RY Y E I
Sbjct: 66 TLNDNMICAVAGMTADANILINYARQAAQRYLLTYNEEI 104
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D +EA +A+KVL KTMDST L+SEK+E A V P GK+ + + + + + L
Sbjct: 176 QDYKEDCDLKEACAMAVKVLSKTMDSTKLSSEKIEFATVGRTPEGKIYHHLWNADEINAL 235
Query: 148 LENFGVAQ 155
L+ G+A+
Sbjct: 236 LKEHGLAK 243
>gi|396458498|ref|XP_003833862.1| similar to proteasome subunit alpha type-5 [Leptosphaeria maculans
JN3]
gi|312210410|emb|CBX90497.1| similar to proteasome subunit alpha type-5 [Leptosphaeria maculans
JN3]
Length = 245
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E VTS LL+TS S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATGEGVILGVEKRVTSTLLETS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA ++ ARV+++ +A+ Y EP++
Sbjct: 67 IVEIDRHIGCAMSGLQADARSMVEHARVESQNHAFNYNEPLR 108
>gi|409045163|gb|EKM54644.1| hypothetical protein PHACADRAFT_258633 [Phanerochaete carnosa
HHB-10118-sp]
Length = 261
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 26/113 (23%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-------MGCLVG-----------ENNVTSKLLQTS- 41
M+RRYD +TT+FSPEGRLYQ++Y G ++G E VT KLL S
Sbjct: 1 MARRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLAKDGIVLAAEKKVTGKLLDLSG 60
Query: 42 -------TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EK++ ++ +V VAGI +DAN L+N +R A+R+ Y Y E I
Sbjct: 61 AKEGGYGGSGEKIFLLNSNVITGVAGITADANSLVNYSREAAQRHLYMYNEDI 113
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
Q+YK+D+T ++A+ L L+V+ KTMDST+L SEKLE A + L + K +I P + L
Sbjct: 185 QEYKEDITLEDAISLVLRVMSKTMDSTTLGSEKLEFATLTLDAEKRPKAKIYRPTEIDSL 244
Query: 148 LENFGVAQ 155
L +A+
Sbjct: 245 LRKHDLAK 252
>gi|240104096|ref|YP_002960405.1| proteasome subunit alpha [Thermococcus gammatolerans EJ3]
gi|259535085|sp|C5A2C2.1|PSA_THEGJ RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|239911650|gb|ACS34541.1| Peptidase T1A, 20S proteasome alpha-subunit (psmA) [Thermococcus
gammatolerans EJ3]
Length = 260
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 64/101 (63%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L E +TS+L++ S S EK
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKGGVVLAVEKRITSRLIEPS-SYEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++IDDH+A A +GI++DA +L++ AR++A+ Y Y EP+
Sbjct: 69 IFQIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPV 109
>gi|406866686|gb|EKD19725.1| 20S proteasome alpha subunit E [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 245
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E VTS LL+TS S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATGGGVVLGVEKRVTSTLLETS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA ++ ARV+++ +A+ Y EP++
Sbjct: 67 IVEIDRHIGCAMSGLQADARSMVEHARVESQNHAFHYNEPLR 108
>gi|390960836|ref|YP_006424670.1| proteasome subunit alpha [Thermococcus sp. CL1]
gi|390519144|gb|AFL94876.1| proteasome subunit alpha [Thermococcus sp. CL1]
Length = 260
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 64/101 (63%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L E +TS+L++ S S EK
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKEGVVLAVEKRITSRLIEPS-SYEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++IDDH+A A +GI++DA +L++ AR++A+ Y Y EP+
Sbjct: 69 IFQIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPV 109
>gi|18977943|ref|NP_579300.1| proteasome subunit alpha [Pyrococcus furiosus DSM 3638]
gi|397652064|ref|YP_006492645.1| proteasome subunit alpha [Pyrococcus furiosus COM1]
gi|23821988|sp|Q8U0L6.1|PSA_PYRFU RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|18893713|gb|AAL81695.1| proteasome, subunit alpha (multicatalytic endopeptidase complex
alpha subunit) [Pyrococcus furiosus DSM 3638]
gi|393189655|gb|AFN04353.1| proteasome subunit alpha [Pyrococcus furiosus COM1]
Length = 260
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 62/100 (62%), Gaps = 19/100 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGCLVGEN-------NVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G GE +TS+L++ S EK
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCGEGVVLAVEKRITSRLIEPD-SYEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
+++IDDH+A A +GI++DA +L+N AR++A+ Y Y EP
Sbjct: 69 IFQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEP 108
>gi|154273695|ref|XP_001537699.1| proteasome component PUP2 [Ajellomyces capsulatus NAm1]
gi|150415307|gb|EDN10660.1| proteasome component PUP2 [Ajellomyces capsulatus NAm1]
gi|225559131|gb|EEH07414.1| proteasome component PUP2 [Ajellomyces capsulatus G186AR]
gi|240282056|gb|EER45559.1| proteasome component PUP2 [Ajellomyces capsulatus H143]
gi|325088194|gb|EGC41504.1| proteasome component [Ajellomyces capsulatus H88]
Length = 245
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E VTS LL+TS S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVVLGVEKRVTSTLLETS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA ++ ARV+++ +A+ Y EP++
Sbjct: 67 IVEIDRHIGCAMSGLQADARSMVEHARVESQNHAFNYSEPLK 108
>gi|298508224|pdb|1VSY|C Chain C, Proteasome Activator Complex
gi|298508238|pdb|1VSY|Q Chain Q, Proteasome Activator Complex
gi|298508440|pdb|3L5Q|H Chain H, Proteasome Activator Complex
gi|298508454|pdb|3L5Q|T Chain T, Proteasome Activator Complex
Length = 232
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 55/93 (59%), Gaps = 18/93 (19%)
Query: 13 SPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTSAEKMYKIDDHV 54
SPEGRLYQV+Y G +G E VTS LL+ TS EK+YK++D +
Sbjct: 1 SPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKI 60
Query: 55 ACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
A AVAG+ +DA ILINTAR+ A+ Y Y E I
Sbjct: 61 AVAVAGLTADAEILINTARIHAQNYLKTYNEDI 93
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPS-GKVKYRICSPESLTML 147
DYKDDM +A++LALK L KT DS++LT ++LE A + + G+V +I P+ + +
Sbjct: 166 DYKDDMKVDDAIELALKTLSKTTDSSALTYDRLEFATIRKGANDGEVYQKIFKPQEIKDI 225
Query: 148 LENFGV 153
L G+
Sbjct: 226 LVKTGI 231
>gi|449300123|gb|EMC96135.1| hypothetical protein BAUCODRAFT_70766 [Baudoinia compniacensis UAMH
10762]
Length = 248
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------------MGCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E +TS LL+TS S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGITTSAGTVLGVEKRITSTLLETS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA +I ARV ++ +A+ Y EPI+
Sbjct: 67 VVEIDRHIGCAMSGLQADARSMIEHARVTSQSHAFNYSEPIK 108
>gi|223477873|ref|YP_002582203.1| proteasome subunit alpha [Thermococcus sp. AM4]
gi|214033099|gb|EEB73927.1| Proteasome subunit alpha archaeal [Thermococcus sp. AM4]
Length = 260
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 64/101 (63%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L E +TS+L++ S S EK
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWNGGVVLAVEKRITSRLIEPS-SYEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++IDDH+A A +GI++DA +L++ AR++A+ Y Y EP+
Sbjct: 69 IFQIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPV 109
>gi|12229894|sp|O24733.1|PSA_THEK1 RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|2398843|dbj|BAA22211.1| proteasome alpha subunit [Thermococcus sp. KS-1]
Length = 260
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L E +TSKL++ S S EK
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPS-SYEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++ IDDH+A A +GI++DA +L++ AR++A+ Y Y EP+
Sbjct: 69 IFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPV 109
>gi|429849310|gb|ELA24713.1| proteasome component pup2 [Colletotrichum gloeosporioides Nara gc5]
Length = 245
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 65/107 (60%), Gaps = 20/107 (18%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y G ++G E VTS LL+TS
Sbjct: 3 MARSEYDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVVLGVEKRVTSTLLETS 62
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
S EK+ +ID H+ CA++G+ +DA ++ ARV+++ +A+ Y EP++
Sbjct: 63 -SVEKIVEIDRHIGCAMSGLQADARSMVEHARVESQSHAFNYNEPLR 108
>gi|296109873|ref|YP_003616822.1| proteasome endopeptidase complex, alpha subunit [methanocaldococcus
infernus ME]
gi|295434687|gb|ADG13858.1| proteasome endopeptidase complex, alpha subunit [Methanocaldococcus
infernus ME]
Length = 247
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 62/101 (61%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGCLVG-----ENNVTSKLLQTSTSAEK 46
YDR TVFSPEGRLYQV+Y + C G + VTSKL++ S EK
Sbjct: 9 YDRAITVFSPEGRLYQVEYAREAVKRGTTAVGIVCKDGVILAVDRRVTSKLIKIR-SIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+Y+IDDHVA A +G+++DA +LI+ AR++A+ Y Y E I
Sbjct: 68 IYQIDDHVAAATSGLVADARVLIDRARLEAQIYRVTYGEEI 108
>gi|57641572|ref|YP_184050.1| proteasome subunit alpha [Thermococcus kodakarensis KOD1]
gi|73921835|sp|Q5JIU9.1|PSA_PYRKO RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|57159896|dbj|BAD85826.1| proteasome, alpha subunit [Thermococcus kodakarensis KOD1]
Length = 260
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L E +TSKL++ S S EK
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPS-SYEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++ IDDH+A A +GI++DA +L++ AR++A+ Y Y EP+
Sbjct: 69 IFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPV 109
>gi|295667089|ref|XP_002794094.1| proteasome component PUP2 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286200|gb|EEH41766.1| proteasome component PUP2 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226291666|gb|EEH47094.1| proteasome subunit alpha type-5-A [Paracoccidioides brasiliensis
Pb18]
Length = 245
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E VTS LL+TS S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVVLGVEKRVTSTLLETS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA ++ ARV+++ +A+ Y EP++
Sbjct: 67 IVEIDRHIGCAMSGLQADARSMVEHARVESQNHAFNYSEPLR 108
>gi|261204329|ref|XP_002629378.1| proteasome component PUP2 [Ajellomyces dermatitidis SLH14081]
gi|239587163|gb|EEQ69806.1| proteasome component PUP2 [Ajellomyces dermatitidis SLH14081]
gi|239614297|gb|EEQ91284.1| 20S proteasome alpha subunit E [Ajellomyces dermatitidis ER-3]
gi|327356330|gb|EGE85187.1| proteasome subunit alpha type-5 [Ajellomyces dermatitidis ATCC
18188]
Length = 245
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E VTS LL+TS S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVVLGVEKRVTSTLLETS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA ++ ARV+++ +A+ Y EP++
Sbjct: 67 IVEIDRHIGCAMSGLQADARSMVEHARVESQNHAFNYSEPLR 108
>gi|145515613|ref|XP_001443706.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411095|emb|CAK76309.1| unnamed protein product [Paramecium tetraurelia]
Length = 249
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 65/123 (52%), Gaps = 27/123 (21%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLVGENNV-------TSKLLQTST 42
MSRRYD++T F+P+GRL QV+Y +G L E + S LL+ S
Sbjct: 1 MSRRYDQKTNTFTPDGRLKQVEYAIEAINQTGSALGVLTNEGMILATEKQEVSHLLEHSK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ---------DYKDD 93
+EK+Y ID H+ V+G +DANILIN AR A + Y +Q+ I DYK +
Sbjct: 61 HSEKIYPIDRHIFSVVSGHTADANILINYAREAAANHRYQFQDNIALEQLIINICDYKQN 120
Query: 94 MTR 96
T+
Sbjct: 121 KTQ 123
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGK-VKYRICSPESLTM 146
QDYK+++T ++ + +A+K L KTMD++S K+E+ V + GK VK + + + +
Sbjct: 177 QDYKENLTLEQGLDIAIKALVKTMDTSSPQPSKIEI--VVISQQGKEVKSKTYNEKEVLS 234
Query: 147 LLENFGVA 154
LL+ G +
Sbjct: 235 LLQKNGFS 242
>gi|145232021|ref|XP_001399476.1| proteasome subunit alpha type-5 [Aspergillus niger CBS 513.88]
gi|134056386|emb|CAK47620.1| unnamed protein product [Aspergillus niger]
gi|358365712|dbj|GAA82334.1| proteasome component PUP2 [Aspergillus kawachii IFO 4308]
Length = 246
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 22/138 (15%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E VTS LL+ S S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSSLLEAS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID H+ CA++G+ +DA L+ ARV+ + +A+ Y EP+ + + Q LAL+
Sbjct: 67 IVEIDQHIGCAMSGLQADARSLVEHARVECQNHAFHYAEPL---RVESCTQAICDLALRF 123
Query: 107 LRKTMDSTSLTSEKLELA 124
D S+ S +A
Sbjct: 124 GETGDDEESVMSRPFGVA 141
>gi|284161625|ref|YP_003400248.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
gi|284011622|gb|ADB57575.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
Length = 246
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 61/101 (60%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G LV + VTS+LL+ T EK
Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKRGATVIGVKTKEGVILVADRRVTSRLLEPDT-IEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+Y IDDH+ A +G+++DA ILI+ AR++A+ Y EPI
Sbjct: 67 IYIIDDHIGAATSGLVADARILIDRARLEAQINRLTYDEPI 107
>gi|15668771|ref|NP_247571.1| proteasome subunit alpha [Methanocaldococcus jannaschii DSM 2661]
gi|2499836|sp|Q60177.1|PSA_METJA RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|1591299|gb|AAB98581.1| proteasome, subunit alpha (psmA) [Methanocaldococcus jannaschii DSM
2661]
Length = 261
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGCLVG-----ENNVTSKLLQTSTSAEK 46
YDR TVFSPEGRLYQV+Y + C G + +TSKL++ S EK
Sbjct: 9 YDRAITVFSPEGRLYQVEYAREAVRRGTTAIGIACKDGVVLAVDRRITSKLVKIR-SIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++IDDHVA A +G+++DA +LI+ AR++A+ Y Y E I
Sbjct: 68 IFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEI 108
>gi|374636055|ref|ZP_09707639.1| proteasome endopeptidase complex, alpha subunit [Methanotorris
formicicus Mc-S-70]
gi|373560313|gb|EHP86580.1| proteasome endopeptidase complex, alpha subunit [Methanotorris
formicicus Mc-S-70]
Length = 272
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGCLVG-----ENNVTSKLLQTSTSAEK 46
YDR TVFSPEGRLYQV+Y + C G + +TS L++ S S EK
Sbjct: 9 YDRAITVFSPEGRLYQVEYAREAVRRGTTAIGIKCKSGVVLAVDRRITSSLIEIS-SIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++IDDH+A A +G+++DA +L++ AR++A+ Y EPI
Sbjct: 68 IFQIDDHIAAATSGLVADARVLVDRARIEAQINRVNYGEPI 108
>gi|375082090|ref|ZP_09729160.1| proteasome subunit alpha [Thermococcus litoralis DSM 5473]
gi|374743303|gb|EHR79671.1| proteasome subunit alpha [Thermococcus litoralis DSM 5473]
Length = 260
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGC-----LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV Y + C L E VTSKL++ S EK
Sbjct: 10 YDRAITVFSPDGRLFQVQYAREAVKRGATAVGVKCKDGVVLAVEKRVTSKLIEPE-SYEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++IDDH+A A +GI++DA +L++ AR++A+ Y Y EP+
Sbjct: 69 IFQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPV 109
>gi|333910829|ref|YP_004484562.1| proteasome subunit alpha [Methanotorris igneus Kol 5]
gi|333751418|gb|AEF96497.1| Proteasome subunit alpha [Methanotorris igneus Kol 5]
Length = 273
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGCLVG-----ENNVTSKLLQTSTSAEK 46
YDR TVFSPEGRLYQV+Y + C G + +TS L++ S S EK
Sbjct: 9 YDRAITVFSPEGRLYQVEYAREAVRRGTTAIGIKCKNGVVLAVDRRITSNLIEIS-SIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++IDDH+A A +G+++DA +L++ AR++A+ Y EPI
Sbjct: 68 IFQIDDHIAAATSGLVADARVLVDRARIEAQINRVTYGEPI 108
>gi|392593504|gb|EIW82829.1| N-terminal nucleophile aminohydrolase [Coniophora puteana
RWD-64-598 SS2]
Length = 261
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 62/113 (54%), Gaps = 26/113 (23%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-------MGCLVG-----------ENNVTSKLLQTS- 41
M+RRYD +TT+FSPEGRLYQ++Y G ++G E VT KLL S
Sbjct: 1 MARRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKRVTGKLLDLSG 60
Query: 42 -------TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EKM+ ++ +V VAGI SDAN L+N AR A+R+ Y + I
Sbjct: 61 AKDGGYGGSGEKMFLLNSNVIGGVAGITSDANSLVNYARTTAQRHLLMYNDDI 113
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKV-KYRICSPESLTM 146
Q+YKDD+ ++A+ L L+++ KTMDST+L SEKLE A + K K +I P +
Sbjct: 185 QEYKDDILVKDAIGLVLRIMSKTMDSTTLGSEKLEFAVLTYDEEAKAPKAKIYKPGEIDA 244
Query: 147 LLENFGVAQ 155
LL+ G+A+
Sbjct: 245 LLQAEGLAK 253
>gi|239782083|pdb|3H4P|A Chain A, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782084|pdb|3H4P|B Chain B, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782085|pdb|3H4P|C Chain C, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782086|pdb|3H4P|D Chain D, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782087|pdb|3H4P|E Chain E, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782088|pdb|3H4P|F Chain F, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782089|pdb|3H4P|G Chain G, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782097|pdb|3H4P|H Chain H, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782098|pdb|3H4P|I Chain I, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782099|pdb|3H4P|J Chain J, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782100|pdb|3H4P|K Chain K, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782101|pdb|3H4P|L Chain L, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782102|pdb|3H4P|M Chain M, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782103|pdb|3H4P|N Chain N, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
Length = 264
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGCLVG-----ENNVTSKLLQTSTSAEK 46
YDR TVFSPEGRLYQV+Y + C G + +TSKL++ S EK
Sbjct: 12 YDRAITVFSPEGRLYQVEYAREAVRRGTTAIGIACKDGVVLAVDRRITSKLVKIR-SIEK 70
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++IDDHVA A +G+++DA +LI+ AR++A+ Y Y E I
Sbjct: 71 IFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEI 111
>gi|67539404|ref|XP_663476.1| hypothetical protein AN5872.2 [Aspergillus nidulans FGSC A4]
gi|40739191|gb|EAA58381.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259479965|tpe|CBF70666.1| TPA: alpha subunit of the 20S proteasome (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 246
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 22/138 (15%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E VTS LL+ S S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSTLLEAS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID H+ CA++G+ +DA L+ ARV+ + +A+ Y EP+ + + Q LAL+
Sbjct: 67 IVEIDQHIGCAMSGLQADARSLVEHARVETQNHAFHYAEPL---RVESCTQAICDLALRF 123
Query: 107 LRKTMDSTSLTSEKLELA 124
D S+ S +A
Sbjct: 124 GETGDDEESVMSRPFGVA 141
>gi|71001590|ref|XP_755476.1| proteasome component Pup2 [Aspergillus fumigatus Af293]
gi|66853114|gb|EAL93438.1| proteasome component Pup2, putative [Aspergillus fumigatus Af293]
gi|159129544|gb|EDP54658.1| proteasome component Pup2, putative [Aspergillus fumigatus A1163]
Length = 250
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 72/137 (52%), Gaps = 22/137 (16%)
Query: 6 DRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEKM 47
DR FSPEGRL+QV+Y G ++G E VTS LL+ S S EK+
Sbjct: 13 DRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSTLLEAS-SVEKI 71
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKVL 107
+ID H+ CA++G+ +DA LI ARV+ + +A+ Y EP+ + + T Q LAL+
Sbjct: 72 VEIDQHIGCAMSGLQADARSLIEHARVECQNHAFHYAEPL---RVESTTQAICDLALRFG 128
Query: 108 RKTMDSTSLTSEKLELA 124
D S+ S +A
Sbjct: 129 ETGDDDESVMSRPFGVA 145
>gi|116778764|gb|ABK20984.1| unknown [Picea sitchensis]
Length = 237
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 70/129 (54%), Gaps = 22/129 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MGC------------LVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAMEAIKLGSTAVGLKTKRGIILAVEKRITSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID+HV CA++G+++DA L+ ARV+ + + ++Y EP+ + T Q LAL+
Sbjct: 67 IMEIDEHVGCAMSGLIADARTLVEHARVETQNHRFSYGEPMS---TESTTQALCDLALRF 123
Query: 107 LRKTMDSTS 115
DS S
Sbjct: 124 GEGDEDSMS 132
>gi|322706833|gb|EFY98413.1| proteasome component PUP2 [Metarhizium anisopliae ARSEF 23]
Length = 245
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 20/106 (18%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y G ++G E VTS LL+TS
Sbjct: 3 MARSEYDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSTLLETS 62
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EK+ +ID H+ CA++G+ +DA ++ ARV+ + +A+ Y EP+
Sbjct: 63 -SVEKIVEIDRHIGCAMSGLQADARSMVEHARVECQSHAFNYNEPL 107
>gi|145546414|ref|XP_001458890.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426712|emb|CAK91493.1| unnamed protein product [Paramecium tetraurelia]
Length = 249
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 65/123 (52%), Gaps = 27/123 (21%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLVGENNV-------TSKLLQTST 42
MSRRYD++T F+P+GRL QV+Y +G L E + S LL+ S
Sbjct: 1 MSRRYDQKTNTFTPDGRLKQVEYAIEAINQTGSALGILTNEGMILATEKQEVSHLLEHSK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ---------DYKDD 93
+EK+Y ID H+ V+G +DANILIN AR A + Y +Q+ I DYK +
Sbjct: 61 HSEKIYPIDRHIFSVVSGHTADANILINYAREAAANHRYQFQDNIGLEQLIINICDYKQN 120
Query: 94 MTR 96
T+
Sbjct: 121 KTQ 123
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKD++T + + +A+K L KTMD++S K+E+ + L +VK + + + + L
Sbjct: 177 QDYKDNLTLDQGLDIAIKALVKTMDTSSPQPSKIEIVVISKLGK-EVKSKTYNEKEVLAL 235
Query: 148 LENFGVA 154
L+ G +
Sbjct: 236 LQKNGFS 242
>gi|367022734|ref|XP_003660652.1| hypothetical protein MYCTH_2299195 [Myceliophthora thermophila ATCC
42464]
gi|347007919|gb|AEO55407.1| hypothetical protein MYCTH_2299195 [Myceliophthora thermophila ATCC
42464]
Length = 245
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 20/107 (18%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y G ++G E VTS LL+TS
Sbjct: 3 MARSEYDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSPLLETS 62
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
S EK+ +ID H+ CA++G+ +DA ++ ARV+ + +A+ Y EP++
Sbjct: 63 -SVEKIVEIDRHIGCAMSGLQADARSMVEHARVECQSHAFNYNEPLR 108
>gi|119178760|ref|XP_001241019.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|392867016|gb|EAS29797.2| proteasome component PUP2 [Coccidioides immitis RS]
Length = 245
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E VTS LL+TS S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVVLGVEKRVTSTLLETS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA +I ARV+++ + + Y+EP++
Sbjct: 67 IVEIDRHIGCAMSGLQADARSMIEHARVESQNHEFHYKEPLR 108
>gi|303310070|ref|XP_003065048.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240104707|gb|EER22903.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320033239|gb|EFW15188.1| proteasome component PUP2 [Coccidioides posadasii str. Silveira]
Length = 245
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E VTS LL+TS S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVVLGVEKRVTSTLLETS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA +I ARV+++ + + Y+EP++
Sbjct: 67 IVEIDRHIGCAMSGLQADARSMIEHARVESQNHEFHYKEPLR 108
>gi|296415892|ref|XP_002837618.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633494|emb|CAZ81809.1| unnamed protein product [Tuber melanosporum]
Length = 245
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------------MGCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E VTS LL+ S S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATGYGVIIGVEKRVTSPLLEAS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA +I ARV+A+ +++ Y EP++
Sbjct: 67 IVEIDRHLGCAMSGLQADARSMIEHARVEAQNHSFHYNEPLR 108
>gi|395333038|gb|EJF65416.1| N-terminal nucleophile aminohydrolase [Dichomitus squalens LYAD-421
SS1]
Length = 261
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 63/113 (55%), Gaps = 26/113 (23%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-------MGCLVG-----------ENNVTSKLLQTS- 41
M+RRYD +TT+FSPEGRLYQ++Y G ++G E VT KLL S
Sbjct: 1 MARRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLSKDGVVLAAEKKVTGKLLDMSI 60
Query: 42 -------TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EK++ ++ +V VAGI +DAN L+N AR ++R+ + Y E I
Sbjct: 61 AKEGGYGGSGEKIFLLNSNVVAGVAGIAADANSLVNYARQASQRHLFMYNEDI 113
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
Q+YK+D+T ++A++L L+ + KTMDST+L SEKLE A + L + K +I P + L
Sbjct: 185 QEYKEDITVEDAIELVLRTMSKTMDSTTLGSEKLEFATLTLDANKNPKAKIYKPAEIDAL 244
Query: 148 LENFGVAQ 155
L+ G+ +
Sbjct: 245 LQKHGLGK 252
>gi|294887522|ref|XP_002772150.1| proteasome subunit, putative [Perkinsus marinus ATCC 50983]
gi|239876091|gb|EER03966.1| proteasome subunit, putative [Perkinsus marinus ATCC 50983]
Length = 208
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 43/52 (82%)
Query: 36 KLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
KLL++ ++EK+Y IDDHV CAVAGI SDAN+LIN R+ A+RY Y+YQEPI
Sbjct: 1 KLLESGKASEKIYPIDDHVVCAVAGITSDANVLINQLRLSAQRYRYSYQEPI 52
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
D+ +DM+ +E + L KVL K+MD+ + T+E LE + L +V +R+ S + + L+
Sbjct: 125 DWHEDMSTKECLDLVAKVLVKSMDTATPTAETLEFGVLTLNKDKEVAFRMLSDDEINTLM 184
Query: 149 ENFGVAQPASE 159
+PA +
Sbjct: 185 AAAKPEKPAGK 195
>gi|11498101|ref|NP_069326.1| proteasome subunit alpha [Archaeoglobus fulgidus DSM 4304]
gi|6093781|sp|O29760.1|PSA_ARCFU RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|2650136|gb|AAB90747.1| proteasome, subunit alpha (psmA) [Archaeoglobus fulgidus DSM 4304]
Length = 246
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGC-----LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y + C L+ + V SKLL+ T EK
Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKRGATAIGIKCKEGVILIADKRVGSKLLEADT-IEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+YKID+H+ A +G+++DA +LI+ AR++A+ Y EPI
Sbjct: 67 IYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDEPI 107
>gi|21362819|sp|Q975G5.2|PSA_SULTO RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
Length = 242
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 59/105 (56%), Gaps = 20/105 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+G LYQVDY +G L+GE ++LL S EK
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTTLGVKTKAGVVLIGEKRKATQLLDVD-SIEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ-DY 90
++ +DDHV C+ AG+ SD ILI+ AR QA ++ Y EPI DY
Sbjct: 69 VFILDDHVGCSFAGLASDGRILIDYARSQALQHRLIYDEPINIDY 113
>gi|15920658|ref|NP_376327.1| proteasome subunit alpha [Sulfolobus tokodaii str. 7]
gi|15621441|dbj|BAB65436.1| proteasome alpha subunit [Sulfolobus tokodaii str. 7]
Length = 235
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 59/105 (56%), Gaps = 20/105 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+G LYQVDY +G L+GE ++LL S EK
Sbjct: 3 YDRAITIFSPDGSLYQVDYAFEAVKKGWTTLGVKTKAGVVLIGEKRKATQLLDVD-SIEK 61
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ-DY 90
++ +DDHV C+ AG+ SD ILI+ AR QA ++ Y EPI DY
Sbjct: 62 VFILDDHVGCSFAGLASDGRILIDYARSQALQHRLIYDEPINIDY 106
>gi|238496413|ref|XP_002379442.1| proteasome component Pup2, putative [Aspergillus flavus NRRL3357]
gi|317147200|ref|XP_001821944.2| proteasome subunit alpha type-5 [Aspergillus oryzae RIB40]
gi|220694322|gb|EED50666.1| proteasome component Pup2, putative [Aspergillus flavus NRRL3357]
gi|391868879|gb|EIT78088.1| 20S proteasome, regulatory subunit alpha type PSMA5/PUP2
[Aspergillus oryzae 3.042]
Length = 246
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 22/138 (15%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E VTS LL+ S S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATNEGVILGVEKRVTSTLLEAS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID H+ CA++G+ +DA L+ ARV+ + +A+ Y EP+ + + Q LAL+
Sbjct: 67 IVEIDQHIGCAMSGLQADARNLVEHARVECQNHAFHYAEPL---RVESCTQAICDLALRF 123
Query: 107 LRKTMDSTSLTSEKLELA 124
D S+ S +A
Sbjct: 124 GETGDDEESVMSRPFGVA 141
>gi|115384510|ref|XP_001208802.1| proteasome component PUP2 [Aspergillus terreus NIH2624]
gi|114196494|gb|EAU38194.1| proteasome component PUP2 [Aspergillus terreus NIH2624]
Length = 246
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 22/138 (15%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E VTS LL+ S S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVSTSEGVILGVEKRVTSTLLEAS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID H+ CA++G+ +DA L+ ARV+ + +A+ Y EP+ + + Q LAL+
Sbjct: 67 IVEIDQHIGCAMSGLQADARNLVEHARVECQNHAFHYAEPL---RVESCTQAICDLALRF 123
Query: 107 LRKTMDSTSLTSEKLELA 124
D S+ S +A
Sbjct: 124 GETGDDEESVMSRPFGVA 141
>gi|409083904|gb|EKM84261.1| hypothetical protein AGABI1DRAFT_110820 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426201040|gb|EKV50963.1| hypothetical protein AGABI2DRAFT_189272 [Agaricus bisporus var.
bisporus H97]
Length = 242
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 22/138 (15%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E V S LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTTVGIKTPDGVILGVEKRVQSPLLEAS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID+H+ CA++G+ +DA +I+ ARV A+ +A+ Y E I K + Q LAL+
Sbjct: 67 IMEIDNHLGCAMSGLTADARTMIDHARVTAQNHAFTYDERI---KVESVTQAVCDLALRF 123
Query: 107 LRKTMDSTSLTSEKLELA 124
D ++ S +A
Sbjct: 124 GESVHDEEAMMSRPFGVA 141
>gi|327400935|ref|YP_004341774.1| Proteasome subunit alpha [Archaeoglobus veneficus SNP6]
gi|327316443|gb|AEA47059.1| Proteasome subunit alpha [Archaeoglobus veneficus SNP6]
Length = 247
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L+ + V SKLL+ +T EK
Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKRGATAIGIKTKEGVLLLADRRVASKLLEITT-IEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+YKID+H+ A +G+++DA +LI+ AR++A+ Y EPI
Sbjct: 67 IYKIDEHICAATSGLVADARVLIDRARIEAQINKLTYDEPI 107
>gi|336121264|ref|YP_004576039.1| proteasome endopeptidase complex subunit alpha [Methanothermococcus
okinawensis IH1]
gi|334855785|gb|AEH06261.1| proteasome endopeptidase complex, alpha subunit
[Methanothermococcus okinawensis IH1]
Length = 274
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 61/101 (60%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGCLVG-----ENNVTSKLLQTSTSAEK 46
YDR TVFSPEGRLYQV+Y + C G + +TSKL++ S EK
Sbjct: 9 YDRAITVFSPEGRLYQVEYAREAVRRGTTAIGIKCKDGVILAVDRRITSKLIEV-CSIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++IDDH+ A +G+++DA +LI+ ARV+A+ Y EPI
Sbjct: 68 IFQIDDHIMAATSGLVADARVLIDRARVEAQINRITYGEPI 108
>gi|154294634|ref|XP_001547757.1| 20S proteasome alpha subunit E [Botryotinia fuckeliana B05.10]
gi|347840744|emb|CCD55316.1| similar to proteasome subunit alpha type-5 [Botryotinia fuckeliana]
Length = 245
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 62/102 (60%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E VTS LL+TS S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATGGGVVLGVEKRVTSTLLETS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA ++ ARV+++ +++ Y EP++
Sbjct: 67 IVEIDRHIGCAMSGLQADARSMVEHARVESQNHSFHYNEPLR 108
>gi|308159674|gb|EFO62196.1| 20S proteasome alpha subunit 3 [Giardia lamblia P15]
Length = 244
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 60/102 (58%), Gaps = 19/102 (18%)
Query: 4 RYDRQTTVFSPEGRLYQVDYM--------GCL----------VGENNVTSKLLQTSTSAE 45
R+D +TT+FS +GRL QV+Y CL V + + SKL TS E
Sbjct: 3 RFDSRTTLFSQDGRLLQVEYAIKAVTIAAPCLAILAQDGIVFVAQKKLPSKLSDQQTS-E 61
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
K+YKID H+ CAV+G+ SDANILI+ AR ++++ Y EPI
Sbjct: 62 KIYKIDSHIVCAVSGLTSDANILIDEARAYSQKWLAVYDEPI 103
>gi|390602034|gb|EIN11427.1| 20S proteasome subunit [Punctularia strigosozonata HHB-11173 SS5]
Length = 260
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 26/113 (23%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-------MGCLVG-----------ENNVTSKLLQTS- 41
M+RRYD +TT+FSPEGRLYQ++Y G ++G E VT KLL S
Sbjct: 1 MARRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKVTGKLLDMSG 60
Query: 42 -------TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EK++ ++ +V VAG SDAN L+N AR A+R+ ++Y E I
Sbjct: 61 TQEGGYGGSGEKIFLLNSNVIGGVAGYSSDANSLVNYARNAAQRHLFSYNEDI 113
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
Q+YKDD++ +EAV + L+V+ KTMDST+L SEKLE A L K K +I P + L
Sbjct: 185 QEYKDDISVEEAVGIVLRVMSKTMDSTTLGSEKLEFA-TLTLEGDKPKAKIYRPTEIDAL 243
Query: 148 LENFGVAQPASEV 160
L+ +A+ +V
Sbjct: 244 LKKHDLAKKEDDV 256
>gi|159119197|ref|XP_001709817.1| 20S proteasome alpha subunit 3 [Giardia lamblia ATCC 50803]
gi|7576250|emb|CAB87991.1| 20S proteasome alpha-subunit 3 (C9) [Giardia intestinalis]
gi|157437934|gb|EDO82143.1| 20S proteasome alpha subunit 3 [Giardia lamblia ATCC 50803]
Length = 244
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 60/102 (58%), Gaps = 19/102 (18%)
Query: 4 RYDRQTTVFSPEGRLYQVDYM--------GCL----------VGENNVTSKLLQTSTSAE 45
R+D +TT+FS +GRL QV+Y CL V + + SKL TS E
Sbjct: 3 RFDSRTTLFSQDGRLLQVEYAIKAVTIAAPCLAILAQDGIVFVAQKKLPSKLSDQQTS-E 61
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
K+YKID H+ CAV+G+ SDANILI+ AR ++++ Y EPI
Sbjct: 62 KIYKIDSHIVCAVSGLTSDANILIDEARTYSQKWLAVYDEPI 103
>gi|367045906|ref|XP_003653333.1| hypothetical protein THITE_2150567 [Thielavia terrestris NRRL 8126]
gi|347000595|gb|AEO66997.1| hypothetical protein THITE_2150567 [Thielavia terrestris NRRL 8126]
Length = 245
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 64/107 (59%), Gaps = 20/107 (18%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y G ++G E VTS LL+TS
Sbjct: 3 MARSEYDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSTLLETS 62
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
S EK+ +ID H+ CA++G+ +DA ++ AR++ + +A+ Y EP++
Sbjct: 63 -SVEKIVEIDRHIGCAMSGLQADARSMVEHARIECQSHAFNYNEPLR 108
>gi|226489759|emb|CAX75030.1| proteasome (prosome macropain) subunit alpha type 4 [Schistosoma
japonicum]
Length = 243
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 18/94 (19%)
Query: 12 FSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEKMYKIDDH 53
FSPEGRLYQV+Y +G L E + LL + +EK+YKI+D
Sbjct: 8 FSPEGRLYQVEYAMEAVGHAGTCLGIVAKDGIVLAAEKRFINNLLDETVFSEKIYKINDD 67
Query: 54 VACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ACAVAGI +DA +LIN R+ A+RY +YQEP+
Sbjct: 68 IACAVAGITADATVLINEMRLIAQRYLLSYQEPM 101
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
QDY + T +EA +L +KVL KTM + LTSEK+E+
Sbjct: 173 QDYNPEATVEEATKLCVKVLYKTMTVSKLTSEKVEIG 209
>gi|315229924|ref|YP_004070360.1| proteasome subunit alpha [Thermococcus barophilus MP]
gi|315182952|gb|ADT83137.1| proteasome subunit alpha [Thermococcus barophilus MP]
Length = 260
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 62/101 (61%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGCLVG-----ENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV Y + C G E VTS+L++ S EK
Sbjct: 10 YDRAITVFSPDGRLFQVQYAREAVKRGATAVGVKCKEGVVLAVEKRVTSRLIEPE-SYEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++IDDH+A A +GI++DA +L++ AR++A+ Y Y EP+
Sbjct: 69 IFQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPV 109
>gi|380490819|emb|CCF35749.1| proteasome component PUP2 [Colletotrichum higginsianum]
Length = 245
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 20/107 (18%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y G ++G E VTS LL+TS
Sbjct: 3 MARSEYDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVVLGVEKRVTSTLLETS 62
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
S EK+ +ID H+ CA++G+ +DA ++ ARV+++ +++ Y EP++
Sbjct: 63 -SVEKIVEIDRHIGCAMSGLQADARSMVEHARVESQSHSFNYNEPLR 108
>gi|310792106|gb|EFQ27633.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
Length = 245
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 20/107 (18%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y G ++G E VTS LL+TS
Sbjct: 3 MARSEYDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVVLGVEKRVTSTLLETS 62
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
S EK+ +ID H+ CA++G+ +DA ++ ARV+++ +++ Y EP++
Sbjct: 63 -SVEKIVEIDRHIGCAMSGLQADARSMVEHARVESQSHSFNYNEPLR 108
>gi|121715648|ref|XP_001275433.1| proteasome component Pup2, putative [Aspergillus clavatus NRRL 1]
gi|119403590|gb|EAW14007.1| proteasome component Pup2, putative [Aspergillus clavatus NRRL 1]
Length = 250
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 72/137 (52%), Gaps = 22/137 (16%)
Query: 6 DRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEKM 47
DR FSPEGRL+QV+Y G ++G E VTS LL+ S S EK+
Sbjct: 13 DRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSTLLEAS-SVEKI 71
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKVL 107
+ID H+ CA++G+ +DA L+ ARV+ + +A+ Y EP+ + + T Q LAL+
Sbjct: 72 VEIDQHIGCAMSGLQADARSLVEHARVECQNHAFHYAEPL---RVESTTQAICDLALRFG 128
Query: 108 RKTMDSTSLTSEKLELA 124
D S+ S +A
Sbjct: 129 ETGDDDESVMSRPFGVA 145
>gi|322701738|gb|EFY93487.1| proteasome component PUP2 [Metarhizium acridum CQMa 102]
Length = 208
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 20/106 (18%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y G ++G E VTS LL+TS
Sbjct: 3 MARSEYDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSTLLETS 62
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EK+ +ID H+ CA++G+ +DA ++ ARV+ + +A+ Y EP+
Sbjct: 63 -SVEKIVEIDRHIGCAMSGLQADARSMVEHARVECQSHAFNYNEPL 107
>gi|15220961|ref|NP_175788.1| proteasome subunit alpha type-5-A [Arabidopsis thaliana]
gi|145325425|ref|NP_001077717.1| proteasome subunit alpha type-5-A [Arabidopsis thaliana]
gi|297853172|ref|XP_002894467.1| hypothetical protein ARALYDRAFT_474517 [Arabidopsis lyrata subsp.
lyrata]
gi|12229903|sp|O81149.1|PSA5A_ARATH RecName: Full=Proteasome subunit alpha type-5-A; AltName: Full=20S
proteasome alpha subunit E-1
gi|6056394|gb|AAF02858.1|AC009324_7 20S proteasome subunit PAE1 [Arabidopsis thaliana]
gi|3421087|gb|AAC32060.1| 20S proteasome subunit PAE1 [Arabidopsis thaliana]
gi|18252873|gb|AAL62363.1| 20S proteasome subunit PAE1 [Arabidopsis thaliana]
gi|21387063|gb|AAM47935.1| 20S proteasome subunit PAE1 [Arabidopsis thaliana]
gi|21554176|gb|AAM63255.1| Proteasome subunit alpha type 5-1 (20S proteasome alpha subunit E1)
[Arabidopsis thaliana]
gi|297340309|gb|EFH70726.1| hypothetical protein ARALYDRAFT_474517 [Arabidopsis lyrata subsp.
lyrata]
gi|332194888|gb|AEE33009.1| proteasome subunit alpha type-5-A [Arabidopsis thaliana]
gi|332194889|gb|AEE33010.1| proteasome subunit alpha type-5-A [Arabidopsis thaliana]
Length = 237
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 22/129 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +IDDH+ CA++G+++DA L+ ARV+ + + ++Y EP+ + T Q LAL+
Sbjct: 67 IMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPM---TVESTTQALCDLALRF 123
Query: 107 LRKTMDSTS 115
+S S
Sbjct: 124 GEGEEESMS 132
>gi|388520027|gb|AFK48075.1| unknown [Medicago truncatula]
Length = 237
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 22/119 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
+ +IDDH+ CA++G+++DA L+ ARV+ + + ++Y EP+ + T Q LAL+
Sbjct: 67 IMEIDDHIGCAMSGLITDARTLVEHARVETQNHRFSYGEPM---TVESTTQALCDLALR 122
>gi|388510594|gb|AFK43363.1| unknown [Medicago truncatula]
gi|388521531|gb|AFK48827.1| unknown [Medicago truncatula]
Length = 237
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +IDDH+ CA++G+++DA L+ ARV+ + + ++Y EP+
Sbjct: 67 IMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPM 107
>gi|217071540|gb|ACJ84130.1| unknown [Medicago truncatula]
Length = 237
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 22/119 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
+ +IDDH+ CA++G+++DA L+ ARV+ + + ++Y EP+ + T Q LAL+
Sbjct: 67 IMEIDDHIGCAMSGLITDARTLVEHARVETQNHRFSYGEPM---TVESTTQALCDLALR 122
>gi|289193038|ref|YP_003458979.1| proteasome endopeptidase complex, alpha subunit [Methanocaldococcus
sp. FS406-22]
gi|288939488|gb|ADC70243.1| proteasome endopeptidase complex, alpha subunit [Methanocaldococcus
sp. FS406-22]
Length = 261
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGCLVG-----ENNVTSKLLQTSTSAEK 46
YDR TVFSPEGRLYQV+Y + C G + +TSKL++ S EK
Sbjct: 9 YDRAITVFSPEGRLYQVEYAREAVRRGTTAIGIVCKDGVVLAVDRRITSKLVKIR-SIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++IDDHVA A +G+++DA +LI+ AR++A+ Y Y E I
Sbjct: 68 IFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEI 108
>gi|403412001|emb|CCL98701.1| predicted protein [Fibroporia radiculosa]
Length = 280
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 63/112 (56%), Gaps = 26/112 (23%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST- 42
+RRYD +TT+FSPEGRLYQ++Y G ++G E VT KLL S
Sbjct: 19 ARRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKVTGKLLDLSGV 78
Query: 43 -------SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EK++ ++ +V VAGI +DAN L+N AR A+++ +AY E I
Sbjct: 79 KEGGYGGSGEKIFLLNSNVVTGVAGITADANSLVNYARQAAQKHLFAYNEDI 130
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGK-VKYRICSPESLTM 146
Q+YKDDM +EA+ L L+V+ KTMDST+L SEKLE A + L P+ K K RI P +
Sbjct: 202 QEYKDDMGVEEAIGLVLRVMSKTMDSTTLGSEKLEFATLTLDPTTKQPKARIYKPAEVDA 261
Query: 147 LLENFGVAQ 155
LL G+A+
Sbjct: 262 LLVEQGLAK 270
>gi|388496446|gb|AFK36289.1| unknown [Medicago truncatula]
Length = 186
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 22/129 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +IDDH+ CA++G+++DA L+ ARV+ + + ++Y EP+ + T Q LAL+
Sbjct: 67 IMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPM---TVESTTQALCDLALRF 123
Query: 107 LRKTMDSTS 115
+S S
Sbjct: 124 GEGDEESMS 132
>gi|213408599|ref|XP_002175070.1| proteasome subunit alpha type-5-B [Schizosaccharomyces japonicus
yFS275]
gi|212003117|gb|EEB08777.1| proteasome subunit alpha type-5-B [Schizosaccharomyces japonicus
yFS275]
Length = 247
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 20/105 (19%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y G ++G E +TS L+++S
Sbjct: 3 MTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVILGVEKRLTSSLMESS 62
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
S EK+ +ID H+ CA++G+ +DA +++ ARVQ + + + Y EP
Sbjct: 63 -SVEKLIEIDTHIGCAISGLTADARTIVDHARVQTQNHRFTYDEP 106
>gi|15231824|ref|NP_188046.1| proteasome subunit alpha type-5-B [Arabidopsis thaliana]
gi|18206373|sp|Q42134.2|PSA5B_ARATH RecName: Full=Proteasome subunit alpha type-5-B; AltName: Full=20S
proteasome alpha subunit E-2; AltName: Full=Proteasome
component Z
gi|13877965|gb|AAK44060.1|AF370245_1 putative 20S proteasome subunit PAE2 [Arabidopsis thaliana]
gi|3421090|gb|AAC32061.1| 20S proteasome subunit PAE2 [Arabidopsis thaliana]
gi|9279577|dbj|BAB01035.1| 20S proteasome subunit PAE-like protein [Arabidopsis thaliana]
gi|17065644|gb|AAL33816.1| putative 20S proteasome subunit PAE2 [Arabidopsis thaliana]
gi|332641977|gb|AEE75498.1| proteasome subunit alpha type-5-B [Arabidopsis thaliana]
Length = 237
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +IDDH+ CA++G+++DA L+ ARV+ + + ++Y EP+
Sbjct: 67 IMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPM 107
>gi|297829986|ref|XP_002882875.1| hypothetical protein ARALYDRAFT_478846 [Arabidopsis lyrata subsp.
lyrata]
gi|297328715|gb|EFH59134.1| hypothetical protein ARALYDRAFT_478846 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +IDDH+ CA++G+++DA L+ ARV+ + + ++Y EP+
Sbjct: 67 IMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPM 107
>gi|256811314|ref|YP_003128683.1| proteasome subunit alpha [Methanocaldococcus fervens AG86]
gi|256794514|gb|ACV25183.1| proteasome endopeptidase complex, alpha subunit [Methanocaldococcus
fervens AG86]
Length = 261
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGCLVG-----ENNVTSKLLQTSTSAEK 46
YDR TVFSPEGRLYQV+Y + C G + +TSKL++ S EK
Sbjct: 9 YDRAITVFSPEGRLYQVEYAREAVRRGTTAVGIVCKDGVVLAVDRRITSKLVKIR-SIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++IDDHVA A +G+++DA +LI+ AR++A+ Y Y E I
Sbjct: 68 IFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEI 108
>gi|224119566|ref|XP_002331192.1| predicted protein [Populus trichocarpa]
gi|222873313|gb|EEF10444.1| predicted protein [Populus trichocarpa]
Length = 237
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +IDDH+ CA++G+++DA L+ ARV+ + + ++Y EP+
Sbjct: 67 VMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPM 107
>gi|170085845|ref|XP_001874146.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
gi|164651698|gb|EDR15938.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
Length = 242
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 22/138 (15%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E V S LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTTVGIRTPAGVVLGVEKRVQSPLLEAS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID H+ CA++G+ +DA +I+ ARV A+ +A+ Y E I K + Q LAL+
Sbjct: 67 IMEIDSHLGCAMSGLTADARTMIDHARVTAQNHAFTYDEKI---KVESVTQAVCDLALRF 123
Query: 107 LRKTMDSTSLTSEKLELA 124
D ++ S +A
Sbjct: 124 GESVHDEEAMMSRPFGVA 141
>gi|389852860|ref|YP_006355094.1| proteasome subunit alpha [Pyrococcus sp. ST04]
gi|388250166|gb|AFK23019.1| proteasome subunit alpha [Pyrococcus sp. ST04]
Length = 261
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 62/100 (62%), Gaps = 19/100 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGC-----LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y + C L E +TS+L++ S EK
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLIEPE-SYEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
+++IDDH+A A +GI++DA +L+N AR++A+ + Y EP
Sbjct: 69 IFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEP 108
>gi|302895295|ref|XP_003046528.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727455|gb|EEU40815.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 245
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 64/107 (59%), Gaps = 20/107 (18%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y G ++G E VTS LL+TS
Sbjct: 3 MARSEYDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSTLLETS 62
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
S EK+ +ID H+ CA++G+ +DA ++ ARV+ + +++ Y EP++
Sbjct: 63 -SVEKIVEIDRHIGCAMSGLQADARSMVEHARVECQSHSFNYNEPLR 108
>gi|449531037|ref|XP_004172494.1| PREDICTED: proteasome subunit alpha type-5-like [Cucumis sativus]
Length = 151
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 68/119 (57%), Gaps = 22/119 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
+ +ID+H+ CA++G+++DA+ L+ ARV+ + + ++Y EP+ + T Q LAL+
Sbjct: 67 IMEIDEHIGCAMSGLIADAHTLVEHARVETQNHRFSYGEPM---TVESTTQALCDLALR 122
>gi|170093417|ref|XP_001877930.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
gi|164647789|gb|EDR12033.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
Length = 255
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 62/113 (54%), Gaps = 26/113 (23%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-------MGCLVG-----------ENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQ++Y G ++G E VT KLL S+
Sbjct: 1 MARRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKVTGKLLDLSS 60
Query: 43 --------SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EK+Y ++ +V VAG+ +DAN LIN AR A+ + Y E I
Sbjct: 61 AKDGGYGGSGEKIYLLNSNVIGGVAGLTADANSLINFARTAAQSHLLTYNEDI 113
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGK-VKYRICSPESLTM 146
Q+YKDD+ ++A+ L L+ + KTMDST+L SEKLE A + L K K +I P +
Sbjct: 185 QEYKDDIEVKDAIGLVLRTMSKTMDSTTLGSEKLEFAVLTLDEVTKQPKAKIYKPAEINA 244
Query: 147 LL 148
LL
Sbjct: 245 LL 246
>gi|167526395|ref|XP_001747531.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773977|gb|EDQ87611.1| predicted protein [Monosiga brevicollis MX1]
Length = 248
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGR++QV+Y G ++ E +TS L+ S S EK
Sbjct: 8 YDRGVNTFSPEGRIFQVEYAIEAIKLGSTAIGIQTKEGVIIAVEKRITSPLMDPS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID H+ACA++G+ +DA LI ARV+A+ Y + Y EP+
Sbjct: 67 IVEIDSHIACAMSGLTADARTLIERARVEAQNYWFTYNEPM 107
>gi|217071324|gb|ACJ84022.1| unknown [Medicago truncatula]
Length = 171
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 22/119 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
+ +IDDH+ CA++G+++DA L+ ARV+ + + ++Y EP+ + T Q LAL+
Sbjct: 67 IMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPM---TVESTTQALCDLALR 122
>gi|328850288|gb|EGF99454.1| hypothetical protein MELLADRAFT_73374 [Melampsora larici-populina
98AG31]
Length = 256
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 22/138 (15%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E SKLL++S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTTIAVTTKEGIILGVERRSQSKLLESS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID HV CAV+G+++D+ ++ AR+ + + + + EPI K + Q LAL+
Sbjct: 67 IMEIDSHVGCAVSGLVADSRTMVEHARLVGQNHRFTFDEPI---KIESVTQAVCDLALRF 123
Query: 107 LRKTMDSTSLTSEKLELA 124
T D ++ S +A
Sbjct: 124 GESTDDEDAMMSRPFGVA 141
>gi|14520823|ref|NP_126298.1| proteasome subunit alpha [Pyrococcus abyssi GE5]
gi|12229944|sp|Q9V122.1|PSA_PYRAB RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|5458039|emb|CAB49529.1| psmA proteasome, subunit alpha (EC 3.4.99.46) [Pyrococcus abyssi
GE5]
gi|380741365|tpe|CCE69999.1| TPA: proteasome subunit alpha [Pyrococcus abyssi GE5]
Length = 260
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 62/100 (62%), Gaps = 19/100 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGCLVG-----ENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y + C G E +TS+L++ S EK
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCKDGVVLAVEKRITSRLIEPE-SYEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
+++IDDH+A A +GI++DA +L+N AR++A+ + Y EP
Sbjct: 69 IFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEP 108
>gi|14591336|ref|NP_143414.1| proteasome subunit alpha [Pyrococcus horikoshii OT3]
gi|6685785|sp|O59219.1|PSA_PYRHO RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|3257982|dbj|BAA30665.1| 260aa long hypothetical proteasome, alpha subunit [Pyrococcus
horikoshii OT3]
Length = 260
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 62/100 (62%), Gaps = 19/100 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGC-----LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y + C L E +TS+L++ S EK
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLIEPE-SYEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
+++IDDH+A A +GI++DA +L+N AR++A+ + Y EP
Sbjct: 69 IFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEP 108
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%), Gaps = 2/37 (5%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
+ YKDDM+ +EA++LA+ L KTM+ S +E +E+A
Sbjct: 179 EKYKDDMSLEEAIKLAIFALAKTMEKPS--AENIEVA 213
>gi|326492526|dbj|BAK02046.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 237
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 70/129 (54%), Gaps = 22/129 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E VTS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID+HV CA++G+++DA L+ ARV+ + + ++Y EP+ + T Q LAL+
Sbjct: 67 IMEIDEHVGCAMSGLIADARTLVEHARVETQNHRFSYGEPL---TVESTTQAICDLALRF 123
Query: 107 LRKTMDSTS 115
+S S
Sbjct: 124 GEGEEESMS 132
>gi|114658362|ref|XP_001150368.1| PREDICTED: proteasome subunit alpha type-4 isoform 5 [Pan
troglodytes]
gi|426379957|ref|XP_004056653.1| PREDICTED: proteasome subunit alpha type-4 isoform 3 [Gorilla
gorilla gorilla]
Length = 230
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 13/87 (14%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYMGCLVGENNVTSKLLQTSTSAEKMYKIDDHVACAVAG 60
MSRRYD +TT+FSPE E KLL +EK+YK+++ +AC+VAG
Sbjct: 1 MSRRYDSRTTIFSPEA-------------ERRNIHKLLDEVFFSEKIYKLNEDMACSVAG 47
Query: 61 IMSDANILINTARVQARRYAYAYQEPI 87
I SDAN+L N R+ A+RY YQEPI
Sbjct: 48 ITSDANVLTNELRLIAQRYLLQYQEPI 74
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 88 QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
QDYK+ +MT + A+ LA+KVL KTMD + L++EK+E+A +GK R+ + +
Sbjct: 146 QDYKEGEMTLKSALALAIKVLNKTMDVSKLSAEKVEIA-TLTRENGKTVIRVLKQKEVEQ 204
Query: 147 LL 148
L+
Sbjct: 205 LI 206
>gi|409075171|gb|EKM75554.1| hypothetical protein AGABI1DRAFT_64309 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426192125|gb|EKV42063.1| 20S proteasome subunit [Agaricus bisporus var. bisporus H97]
Length = 262
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 63/113 (55%), Gaps = 26/113 (23%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-------MGCLVG-----------ENNVTSKLLQTS- 41
M+RRYD +TT+FSPEGRLYQ++Y G ++G E VT KLL +
Sbjct: 1 MARRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKVTGKLLDLTG 60
Query: 42 -------TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EK++ ++ +V VAG+ +DAN L+N AR A+R+ AY E I
Sbjct: 61 AKAGGYGGSGEKIFLLNSNVIGGVAGLTADANSLVNFARSAAQRHLLAYNEDI 113
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKV-KYRICSPESLTM 146
Q+YKDD+ ++A+ L L+ + KTMDST+L+SEKLE A + L K K +I P +
Sbjct: 185 QEYKDDILVKDAIGLVLRTMSKTMDSTTLSSEKLEFAVLSLDDDKKTPKAKIYRPSEIDA 244
Query: 147 LLENFGV 153
LL+ G+
Sbjct: 245 LLQTEGL 251
>gi|332157782|ref|YP_004423061.1| proteasome subunit alpha [Pyrococcus sp. NA2]
gi|331033245|gb|AEC51057.1| proteasome subunit alpha [Pyrococcus sp. NA2]
Length = 260
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 62/100 (62%), Gaps = 19/100 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGC-----LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y + C L E +TS+L++ S EK
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLIEPE-SYEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
+++IDDH+A A +GI++DA +L+N AR++A+ + Y EP
Sbjct: 69 IFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEP 108
>gi|337283871|ref|YP_004623345.1| proteasome subunit alpha [Pyrococcus yayanosii CH1]
gi|334899805|gb|AEH24073.1| proteasome subunit alpha [Pyrococcus yayanosii CH1]
Length = 277
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 62/100 (62%), Gaps = 19/100 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGCLVG-----ENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y + C G E +TS+L++ S EK
Sbjct: 27 YDRAITVFSPDGRLFQVNYAREAVKRGATAAGVKCEEGVVLAVEKRITSRLIEPE-SYEK 85
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
+++IDDH+A A +GI++DA +L++ AR++A+ Y Y EP
Sbjct: 86 IFQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEP 125
>gi|345566204|gb|EGX49149.1| hypothetical protein AOL_s00079g21 [Arthrobotrys oligospora ATCC
24927]
Length = 243
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------------MGCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E VTS LL+ S S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATGYGVIIGVEKRVTSPLLEAS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA +I ARV+A+ + + Y EP++
Sbjct: 67 IVEIDRHLGCAMSGLQADARSMIEHARVEAQNHTFHYGEPLR 108
>gi|392576091|gb|EIW69223.1| 20S proteasome subunit [Tremella mesenterica DSM 1558]
Length = 244
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 22/138 (15%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E V S LL+TS S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAMEAIKLGSTTVGIATPEGTVLGVEKRVASPLLETS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID H+ CA++G+ +DA +++ ARV ++ +A+ Y E I K + Q LAL+
Sbjct: 67 IMEIDRHIGCAMSGLTADARTMVDHARVTSQNHAFTYDENI---KVESCTQAVCDLALRF 123
Query: 107 LRKTMDSTSLTSEKLELA 124
D +L S +A
Sbjct: 124 GESVEDDDALMSRPFGVA 141
>gi|302413898|ref|XP_003004781.1| proteasome component PUP2 [Verticillium albo-atrum VaMs.102]
gi|261355850|gb|EEY18278.1| proteasome component PUP2 [Verticillium albo-atrum VaMs.102]
Length = 243
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 64/107 (59%), Gaps = 20/107 (18%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y G ++G E VTS LL+TS
Sbjct: 1 MARSEYDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATADGVILGVEKRVTSTLLETS 60
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
S EK+ +ID H+ CA++G+ +DA ++ ARV+++ + + Y EP++
Sbjct: 61 -SVEKIVEIDRHIGCAMSGLQADARSMVEHARVESQSHTFNYAEPLR 106
>gi|255584432|ref|XP_002532947.1| proteasome subunit alpha type, putative [Ricinus communis]
gi|223527276|gb|EEF29431.1| proteasome subunit alpha type, putative [Ricinus communis]
Length = 237
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 22/129 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID+H+ CA++G+++DA L+ ARV+ + + ++Y EP+ + T Q LAL+
Sbjct: 67 VMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPM---TVESTTQALCDLALRF 123
Query: 107 LRKTMDSTS 115
DS S
Sbjct: 124 GEGDEDSMS 132
>gi|145506186|ref|XP_001439059.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406232|emb|CAK71662.1| unnamed protein product [Paramecium tetraurelia]
Length = 249
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 65/123 (52%), Gaps = 27/123 (21%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLVGENNV-------TSKLLQTST 42
MSRRYD++T F+P+GRL QV+Y +G L + + S LL+ S
Sbjct: 1 MSRRYDQKTNTFTPDGRLKQVEYAIEAINQTGSALGVLTNDGMILATEKQEVSHLLEHSK 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ---------DYKDD 93
+EK+Y ID H+ V+G +DANILIN AR A + Y +Q+ I DYK +
Sbjct: 61 HSEKIYPIDRHIFSVVSGHTADANILINYAREAAANHRYQFQDNIGLEQLIINICDYKQN 120
Query: 94 MTR 96
T+
Sbjct: 121 KTQ 123
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKD++T ++ + +A+K L KTMD++S K+E+ + L +VK + + + + L
Sbjct: 177 QDYKDNLTLEQGLDIAIKALVKTMDTSSPQPSKIEIVVISKLGK-EVKSKTYNEKEVLSL 235
Query: 148 LENFGVA 154
L+ G +
Sbjct: 236 LQKNGFS 242
>gi|357152570|ref|XP_003576163.1| PREDICTED: proteasome subunit alpha type-5-like [Brachypodium
distachyon]
Length = 237
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 70/129 (54%), Gaps = 22/129 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E VTS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID+HV CA++G+++DA L+ ARV+ + + ++Y EP+ + T Q LAL+
Sbjct: 67 IMEIDEHVGCAMSGLIADARTLVEHARVETQNHRFSYGEPM---TVESTTQAICDLALRF 123
Query: 107 LRKTMDSTS 115
+S S
Sbjct: 124 GEGEEESMS 132
>gi|449455403|ref|XP_004145442.1| PREDICTED: proteasome subunit alpha type-5-like [Cucumis sativus]
Length = 237
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 19/102 (18%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
K+ +ID+H+ CA++G+++DA+ L+ ARV+ + + ++Y EP+
Sbjct: 66 KIMEIDEHIGCAMSGLIADAHTLVEHARVETQNHRFSYGEPM 107
>gi|357156162|ref|XP_003577362.1| PREDICTED: proteasome subunit alpha type-5-like [Brachypodium
distachyon]
Length = 237
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 67/119 (56%), Gaps = 22/119 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E VTS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
+ +ID+HV CA++G+++DA L+ ARV+ + + ++Y EP+ + T Q LAL+
Sbjct: 67 IMEIDEHVGCAMSGLIADARTLVEHARVETQNHRFSYGEPM---TVESTTQAICDLALR 122
>gi|299752286|ref|XP_001830819.2| proteasome subunit alpha type 4 [Coprinopsis cinerea okayama7#130]
gi|298409764|gb|EAU90883.2| proteasome subunit alpha type 4 [Coprinopsis cinerea okayama7#130]
Length = 261
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 63/113 (55%), Gaps = 26/113 (23%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-------MGCLVG-----------ENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQ++Y G ++G E VT KLL S+
Sbjct: 1 MARRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKVTGKLLDLSS 60
Query: 43 --------SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EK++ ++ +V VAG+ +DAN L+N AR A+R+ Y E I
Sbjct: 61 SKEGGYGGSGEKIFLLNSNVIGGVAGLTADANSLVNFARNAAQRHLLTYNEDI 113
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRICSPESLTM 146
Q+YKDD+ ++A+ L L+ + KTMDST+L SEKLE A + L P + K K +I P +
Sbjct: 185 QEYKDDIVVKDAIGLVLRTMSKTMDSTTLNSEKLEFAVLTLDPETNKPKAKIYRPHEIDA 244
Query: 147 LLENFGVAQ 155
LL + G+ +
Sbjct: 245 LLLSEGLTK 253
>gi|302680901|ref|XP_003030132.1| hypothetical protein SCHCODRAFT_11605 [Schizophyllum commune H4-8]
gi|300103823|gb|EFI95229.1| hypothetical protein SCHCODRAFT_11605 [Schizophyllum commune H4-8]
Length = 263
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 61/113 (53%), Gaps = 26/113 (23%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-------MGCLVG-----------ENNVTSKLLQTS- 41
M+RRYD +TT+FSPEGRLYQ++Y G ++G E VT KLL S
Sbjct: 1 MARRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKVTGKLLDMSL 60
Query: 42 -------TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EK++ ++ +V VAG +DAN LIN AR A+R+ Y E I
Sbjct: 61 AKDGGYGGSGEKIFLLNSNVVAGVAGWTADANSLINYARTAAQRHLLMYNEDI 113
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRICSPESLTM 146
Q+YKDD+ ++A+ L L+ + KTMDST+L SEKLE A + L P + K K +I P +
Sbjct: 185 QEYKDDIEVKDAIGLVLRTMSKTMDSTTLGSEKLEFAVLTLDPETKKPKAKIYRPSEIDA 244
Query: 147 LLENFGVAQ 155
LL++ G+A+
Sbjct: 245 LLQSEGLAK 253
>gi|71897167|ref|NP_001026578.1| proteasome subunit alpha type-5 [Gallus gallus]
gi|311771753|ref|NP_001185745.1| putative proteasome alpha 5 subunit [Taeniopygia guttata]
gi|53133117|emb|CAG31964.1| hypothetical protein RCJMB04_14i9 [Gallus gallus]
Length = 241
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDSHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|326501362|dbj|BAJ98912.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508742|dbj|BAJ95893.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 237
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 67/119 (56%), Gaps = 22/119 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E VTS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLMTKYGVVLAVEKRVTSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
+ +ID+HV CA++G+++DA L+ ARV+ + + ++Y EP+ + T Q LAL+
Sbjct: 67 IMEIDEHVGCAMSGLIADARTLVEHARVETQNHRFSYGEPM---TVESTTQAICDLALR 122
>gi|387017840|gb|AFJ51038.1| Proteasome subunit alpha type-5 [Crotalus adamanteus]
Length = 241
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDSHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|326476730|gb|EGE00740.1| proteasome subunit alpha [Trichophyton tonsurans CBS 112818]
Length = 245
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E VTS LL+TS S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVVLGVEKRVTSTLLETS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA ++ ARV+ + + + Y EP++
Sbjct: 67 IVEIDQHIGCAMSGLQADARSMVEHARVETQNHRFHYSEPLR 108
>gi|253744109|gb|EET00362.1| 20S proteasome alpha subunit 3 [Giardia intestinalis ATCC 50581]
Length = 244
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 19/102 (18%)
Query: 4 RYDRQTTVFSPEGRLYQVDYM--------GCL----------VGENNVTSKLLQTSTSAE 45
R+D +TT+FS +GRL QV+Y CL V + + SKL TS E
Sbjct: 3 RFDSRTTLFSQDGRLLQVEYAIKAVTIAAPCLAILAQDGIVFVAQKKLPSKLSDQQTS-E 61
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
K+Y+ID H+ CAV+G+ SDANILI+ AR ++++ Y EPI
Sbjct: 62 KIYRIDSHIVCAVSGLTSDANILIDEARAYSQKWLAVYDEPI 103
>gi|315052036|ref|XP_003175392.1| proteasome component PUP2 [Arthroderma gypseum CBS 118893]
gi|311340707|gb|EFQ99909.1| proteasome component PUP2 [Arthroderma gypseum CBS 118893]
gi|326482315|gb|EGE06325.1| proteasome component PUP2 [Trichophyton equinum CBS 127.97]
Length = 245
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E VTS LL+TS S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVVLGVEKRVTSTLLETS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA ++ ARV+ + + + Y EP++
Sbjct: 67 IVEIDQHIGCAMSGLQADARSMVEHARVETQNHRFHYSEPLR 108
>gi|221052433|ref|XP_002257792.1| proteasome subunit alpha type 5 [Plasmodium knowlesi strain H]
gi|193807623|emb|CAQ38128.1| proteasome subunit alpha type 5, putative [Plasmodium knowlesi
strain H]
Length = 256
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-MGC-----------------LVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E + S L++ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYALGAIKLGSTAVGICVNDGVILASERRIASTLIEKS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ IDDH+ CA++G+M+DA LI+ ARV+ Y + Y E I
Sbjct: 67 LLPIDDHIGCAMSGLMADARTLIDYARVECNHYKFIYNENIN 108
>gi|327298890|ref|XP_003234138.1| proteasome subunit alpha [Trichophyton rubrum CBS 118892]
gi|326463032|gb|EGD88485.1| proteasome subunit alpha [Trichophyton rubrum CBS 118892]
Length = 245
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E VTS LL+TS S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVVLGVEKRVTSTLLETS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA ++ ARV+ + + + Y EP++
Sbjct: 67 IVEIDQHIGCAMSGLQADARSMVEHARVETQNHRFHYSEPLR 108
>gi|46123563|ref|XP_386335.1| hypothetical protein FG06159.1 [Gibberella zeae PH-1]
Length = 243
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 61/101 (60%), Gaps = 19/101 (18%)
Query: 6 DRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEKM 47
DR FSPEGRL+QV+Y G ++G E VTS LL+TS S EK+
Sbjct: 7 DRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSTLLETS-SVEKI 65
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ID H+ CA++G+ +DA ++ ARV+++ +A+ Y EP++
Sbjct: 66 VEIDRHIGCAMSGLQADARSMVEHARVESQSHAFNYNEPLR 106
>gi|45387823|ref|NP_991271.1| proteasome subunit alpha type-5 [Danio rerio]
gi|37681911|gb|AAQ97833.1| proteasome subunit, alpha type, 5 [Danio rerio]
gi|47938031|gb|AAH71495.1| Proteasome (prosome, macropain) subunit, alpha type,5 [Danio rerio]
Length = 241
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDSHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|313238191|emb|CBY13285.1| unnamed protein product [Oikopleura dioica]
Length = 162
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 61/102 (59%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y GC++ E +TS L+ TS EK
Sbjct: 8 YDRSVNSFSPEGRLFQVEYAIEAIKLGSTAIGIHTKEGCVLAVEKRITSPLI-VPTSIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
++++D HV CA++G+++DA +I+ ARV+A+ + + + E ++
Sbjct: 67 IFEVDKHVGCAMSGLIADARTMIDRARVEAQNHWFTFNEHMK 108
>gi|150400006|ref|YP_001323773.1| proteasome subunit alpha [Methanococcus vannielii SB]
gi|166199289|sp|A6URN9.1|PSA_METVS RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|150012709|gb|ABR55161.1| Proteasome endopeptidase complex [Methanococcus vannielii SB]
Length = 259
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGCLVG-----ENNVTSKLLQTSTSAEK 46
YDR T+FSPEGRLYQV+Y + C G + +TSKL+ S S EK
Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVS-SIEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++IDDH+ A +G+++DA +LI+ ARV+A+ +Y E I
Sbjct: 69 IFQIDDHIVAATSGLVADARVLIDRARVEAQVNRISYGEAI 109
>gi|242006680|ref|XP_002424175.1| proteasome subunit alpha type, putative [Pediculus humanus
corporis]
gi|212507516|gb|EEB11437.1| proteasome subunit alpha type, putative [Pediculus humanus
corporis]
Length = 242
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 19/102 (18%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G L E +TS L++ ST E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVCTSEGVVLAVEKRITSPLMEPST-IE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
K+ +ID H+ CAV+G+M+D+ I+I+ ARV+A+ + + Y E +
Sbjct: 66 KIVEIDSHIGCAVSGLMADSRIMIDRARVEAQNHWFIYNEKM 107
>gi|126310923|ref|XP_001372468.1| PREDICTED: proteasome subunit alpha type-5-like [Monodelphis
domestica]
gi|395535509|ref|XP_003769768.1| PREDICTED: proteasome subunit alpha type-5 [Sarcophilus harrisii]
Length = 241
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|408398102|gb|EKJ77236.1| hypothetical protein FPSE_02511 [Fusarium pseudograminearum CS3096]
Length = 257
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 61/101 (60%), Gaps = 19/101 (18%)
Query: 6 DRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEKM 47
DR FSPEGRL+QV+Y G ++G E VTS LL+TS S EK+
Sbjct: 21 DRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSTLLETS-SVEKI 79
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ID H+ CA++G+ +DA ++ ARV+++ +A+ Y EP++
Sbjct: 80 VEIDRHIGCAMSGLQADARSMVEHARVESQSHAFNYNEPLR 120
>gi|313217255|emb|CBY38396.1| unnamed protein product [Oikopleura dioica]
Length = 149
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 20/107 (18%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y GC++ E +TS L+
Sbjct: 3 MTRSEYDRSVNSFSPEGRLFQVEYAIEAIKLGSTAIGIHTKEGCVLAVEKRITSPLI-VP 61
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
TS EK++++D HV CA++G+++DA +I+ ARV+A+ + + + E ++
Sbjct: 62 TSIEKIFEVDKHVGCAMSGLIADARTMIDRARVEAQNHWFTFNEHMK 108
>gi|213511474|ref|NP_001134432.1| Proteasome subunit alpha type-5 [Salmo salar]
gi|209733218|gb|ACI67478.1| Proteasome subunit alpha type-5 [Salmo salar]
gi|303663916|gb|ADM16120.1| Proteasome subunit alpha type-5 [Salmo salar]
Length = 241
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDTHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|242036903|ref|XP_002465846.1| hypothetical protein SORBIDRAFT_01g046910 [Sorghum bicolor]
gi|241919700|gb|EER92844.1| hypothetical protein SORBIDRAFT_01g046910 [Sorghum bicolor]
Length = 237
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E VTS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID+H+ CA++G+++DA L+ ARV+ + + ++Y EP+
Sbjct: 67 IMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPM 107
>gi|89213678|gb|ABD64146.1| proteasome subunit alpha type 5 [Opisthorchis viverrini]
Length = 245
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 72/131 (54%), Gaps = 22/131 (16%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E V S L+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEATKLGSTGIGIKTPEGIVLAVEKRVNSPLIVPS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
++K+DDH+ACAV+G+++DA LI AR +A + + Y E + +D+T+ + LAL
Sbjct: 67 IFKVDDHIACAVSGLVADARTLIERARTEAAHHWFVYNEKMS--VEDVTKAVS-NLALAF 123
Query: 107 LRKTMDSTSLT 117
+DS +++
Sbjct: 124 GDDDVDSGAMS 134
>gi|226358651|gb|ACO51178.1| proteasome (prosome, macropain) subunit alpha type 5
[Hypophthalmichthys nobilis]
Length = 228
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDTHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|226530826|ref|NP_001148604.1| proteasome subunit alpha type 5 [Zea mays]
gi|195620714|gb|ACG32187.1| proteasome subunit alpha type 5 [Zea mays]
gi|413957015|gb|AFW89664.1| hypothetical protein ZEAMMB73_505721 [Zea mays]
Length = 237
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E VTS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID+H+ CA++G+++DA L+ ARV+ + + ++Y EP+
Sbjct: 67 IMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPM 107
>gi|54696298|gb|AAV38521.1| proteasome (prosome, macropain) subunit, alpha type, 5 [synthetic
construct]
gi|61367252|gb|AAX42972.1| proteasome subunit alpha type 5 [synthetic construct]
Length = 242
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|77551900|gb|ABA94697.1| Proteasome subunit alpha type 5, putative, expressed [Oryza sativa
Japonica Group]
Length = 184
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E VTS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID+H+ CA++G+++DA L+ ARV+ + + ++Y EP+
Sbjct: 67 IMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPM 107
>gi|74141404|dbj|BAE35982.1| unnamed protein product [Mus musculus]
Length = 241
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIKTSEGVCLAVEKRITSPLMEPS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|261403706|ref|YP_003247930.1| proteasome subunit alpha [Methanocaldococcus vulcanius M7]
gi|261370699|gb|ACX73448.1| proteasome endopeptidase complex, alpha subunit [Methanocaldococcus
vulcanius M7]
Length = 257
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGCLVG-----ENNVTSKLLQTSTSAEK 46
YDR TVFSPEGRLYQV+Y + C G + +TSKL++ S EK
Sbjct: 9 YDRAITVFSPEGRLYQVEYAREAVRRGTTAVGITCKDGVVLAVDRRITSKLVKIR-SIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++ID+HVA A +G+++DA +LI+ AR++A+ Y Y E I
Sbjct: 68 IFQIDEHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEI 108
>gi|115486269|ref|NP_001068278.1| Os11g0615700 [Oryza sativa Japonica Group]
gi|12229920|sp|Q9LSU1.1|PSA5_ORYSJ RecName: Full=Proteasome subunit alpha type-5; AltName: Full=20S
proteasome alpha subunit E; AltName: Full=20S proteasome
subunit alpha-5
gi|8671498|dbj|BAA96832.1| alpha 5 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|77551899|gb|ABA94696.1| Proteasome subunit alpha type 5, putative, expressed [Oryza sativa
Japonica Group]
gi|113645500|dbj|BAF28641.1| Os11g0615700 [Oryza sativa Japonica Group]
gi|215737179|dbj|BAG96108.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765321|dbj|BAG87018.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218186097|gb|EEC68524.1| hypothetical protein OsI_36813 [Oryza sativa Indica Group]
gi|222616332|gb|EEE52464.1| hypothetical protein OsJ_34630 [Oryza sativa Japonica Group]
Length = 237
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 22/119 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E VTS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
+ +ID+H+ CA++G+++DA L+ ARV+ + + ++Y EP+ + T Q LAL+
Sbjct: 67 IMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPM---TVESTTQAICDLALR 122
>gi|426330627|ref|XP_004026308.1| PREDICTED: proteasome subunit alpha type-5-like [Gorilla gorilla
gorilla]
Length = 241
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|21465646|pdb|1IRU|E Chain E, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|21465660|pdb|1IRU|S Chain S, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|296740|emb|CAA43962.1| macropain subunit zeta [Homo sapiens]
Length = 241
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYDIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|355714001|gb|AES04856.1| proteasome subunit, alpha type, 5 [Mustela putorius furo]
Length = 239
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ S S E
Sbjct: 6 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIE 64
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 65 KIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 104
>gi|225716302|gb|ACO13997.1| Proteasome subunit alpha type-5 [Esox lucius]
Length = 241
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDTHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|74137638|dbj|BAE35848.1| unnamed protein product [Mus musculus]
Length = 241
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|291398347|ref|XP_002715852.1| PREDICTED: proteasome alpha 5 subunit [Oryctolagus cuniculus]
Length = 241
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTAEGVCLAVEKRITSPLMEPS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|156717484|ref|NP_001096282.1| proteasome (prosome, macropain) subunit, alpha type, 5 [Xenopus
(Silurana) tropicalis]
gi|134025463|gb|AAI35541.1| LOC100124849 protein [Xenopus (Silurana) tropicalis]
Length = 241
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|7106387|ref|NP_036097.1| proteasome subunit alpha type-5 [Mus musculus]
gi|23110942|ref|NP_002781.2| proteasome subunit alpha type-5 isoform 1 [Homo sapiens]
gi|62751982|ref|NP_001015566.1| proteasome subunit alpha type-5 [Bos taurus]
gi|222136590|ref|NP_001138373.1| proteasome subunit alpha type-5 [Sus scrofa]
gi|386780888|ref|NP_001247538.1| proteasome subunit alpha type-5 [Macaca mulatta]
gi|194211033|ref|XP_001918089.1| PREDICTED: proteasome subunit alpha type-5-like isoform 1 [Equus
caballus]
gi|296208738|ref|XP_002751222.1| PREDICTED: proteasome subunit alpha type-5 isoform 1 [Callithrix
jacchus]
gi|297664206|ref|XP_002810542.1| PREDICTED: proteasome subunit alpha type-5 [Pongo abelii]
gi|301767678|ref|XP_002919250.1| PREDICTED: proteasome subunit alpha type-5-like [Ailuropoda
melanoleuca]
gi|332237497|ref|XP_003267940.1| PREDICTED: proteasome subunit alpha type-5 isoform 1 [Nomascus
leucogenys]
gi|344275588|ref|XP_003409594.1| PREDICTED: proteasome subunit alpha type-5-like [Loxodonta
africana]
gi|348586990|ref|XP_003479251.1| PREDICTED: proteasome subunit alpha type-5-like [Cavia porcellus]
gi|354497813|ref|XP_003511013.1| PREDICTED: proteasome subunit alpha type-5-like [Cricetulus
griseus]
gi|359319848|ref|XP_003639184.1| PREDICTED: proteasome subunit alpha type-5-like [Canis lupus
familiaris]
gi|395821581|ref|XP_003784116.1| PREDICTED: proteasome subunit alpha type-5 isoform 1 [Otolemur
garnettii]
gi|402855528|ref|XP_003892373.1| PREDICTED: proteasome subunit alpha type-5 [Papio anubis]
gi|403284168|ref|XP_003933451.1| PREDICTED: proteasome subunit alpha type-5 [Saimiri boliviensis
boliviensis]
gi|410967900|ref|XP_003990451.1| PREDICTED: proteasome subunit alpha type-5 isoform 1 [Felis catus]
gi|426216148|ref|XP_004002329.1| PREDICTED: proteasome subunit alpha type-5 isoform 1 [Ovis aries]
gi|12229953|sp|Q9Z2U1.1|PSA5_MOUSE RecName: Full=Proteasome subunit alpha type-5; AltName:
Full=Macropain zeta chain; AltName: Full=Multicatalytic
endopeptidase complex zeta chain; AltName:
Full=Proteasome zeta chain
gi|38258905|sp|P28066.3|PSA5_HUMAN RecName: Full=Proteasome subunit alpha type-5; AltName:
Full=Macropain zeta chain; AltName: Full=Multicatalytic
endopeptidase complex zeta chain; AltName:
Full=Proteasome zeta chain
gi|75060919|sp|Q5E987.1|PSA5_BOVIN RecName: Full=Proteasome subunit alpha type-5
gi|378792306|pdb|3UNB|D Chain D, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792320|pdb|3UNB|R Chain R, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792334|pdb|3UNB|FF Chain f, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792348|pdb|3UNB|TT Chain t, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792362|pdb|3UNE|D Chain D, Mouse Constitutive 20s Proteasome
gi|378792376|pdb|3UNE|R Chain R, Mouse Constitutive 20s Proteasome
gi|378792390|pdb|3UNE|FF Chain f, Mouse Constitutive 20s Proteasome
gi|378792404|pdb|3UNE|TT Chain t, Mouse Constitutive 20s Proteasome
gi|378792418|pdb|3UNF|D Chain D, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792432|pdb|3UNF|R Chain R, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792446|pdb|3UNH|D Chain D, Mouse 20s Immunoproteasome
gi|378792460|pdb|3UNH|R Chain R, Mouse 20s Immunoproteasome
gi|3805976|gb|AAC69149.1| zeta proteasome chain [Mus musculus]
gi|14715088|gb|AAH10709.1| Proteasome (prosome, macropain) subunit, alpha type 5 [Mus
musculus]
gi|38014563|gb|AAH60575.1| Proteasome (prosome, macropain) subunit, alpha type 5 [Rattus
norvegicus]
gi|48145811|emb|CAG33128.1| PSMA5 [Homo sapiens]
gi|53734656|gb|AAH83342.1| Proteasome (prosome, macropain) subunit, alpha type 5 [Mus
musculus]
gi|59858431|gb|AAX09050.1| proteasome alpha 5 subunit [Bos taurus]
gi|74137676|dbj|BAE35866.1| unnamed protein product [Mus musculus]
gi|74179944|dbj|BAE36528.1| unnamed protein product [Mus musculus]
gi|74228645|dbj|BAE25389.1| unnamed protein product [Mus musculus]
gi|74353432|gb|AAI03752.1| Proteasome (prosome, macropain) subunit, alpha type, 5 [Homo
sapiens]
gi|74354487|gb|AAI02020.1| Proteasome (prosome, macropain) subunit, alpha type, 5 [Homo
sapiens]
gi|74354509|gb|AAI02021.1| Proteasome (prosome, macropain) subunit, alpha type, 5 [Homo
sapiens]
gi|74354585|gb|AAI02344.1| Proteasome (prosome, macropain) subunit, alpha type, 5 [Bos taurus]
gi|74355765|gb|AAI02019.1| Proteasome (prosome, macropain) subunit, alpha type, 5 [Homo
sapiens]
gi|80478701|gb|AAI08369.1| Proteasome (prosome, macropain) subunit, alpha type 5 [Mus
musculus]
gi|119576785|gb|EAW56381.1| proteasome (prosome, macropain) subunit, alpha type, 5, isoform
CRA_a [Homo sapiens]
gi|148670013|gb|EDL01960.1| mCG4051 [Mus musculus]
gi|149025685|gb|EDL81928.1| proteasome (prosome, macropain) subunit, alpha type 5, isoform
CRA_a [Rattus norvegicus]
gi|189053884|dbj|BAG36153.1| unnamed protein product [Homo sapiens]
gi|261860718|dbj|BAI46881.1| proteasome (prosome, macropain) subunit, alpha type, 5 [synthetic
construct]
gi|296489341|tpg|DAA31454.1| TPA: proteasome alpha 5 subunit [Bos taurus]
gi|351708756|gb|EHB11675.1| Proteasome subunit alpha type-5 [Heterocephalus glaber]
gi|355558236|gb|EHH15016.1| hypothetical protein EGK_01047 [Macaca mulatta]
gi|355745506|gb|EHH50131.1| hypothetical protein EGM_00908 [Macaca fascicularis]
gi|380814784|gb|AFE79266.1| proteasome subunit alpha type-5 isoform 1 [Macaca mulatta]
gi|383420087|gb|AFH33257.1| proteasome subunit alpha type-5 isoform 1 [Macaca mulatta]
gi|384948316|gb|AFI37763.1| proteasome subunit alpha type-5 isoform 1 [Macaca mulatta]
gi|410250286|gb|JAA13110.1| proteasome (prosome, macropain) subunit, alpha type, 5 [Pan
troglodytes]
gi|410295702|gb|JAA26451.1| proteasome (prosome, macropain) subunit, alpha type, 5 [Pan
troglodytes]
gi|410333681|gb|JAA35787.1| proteasome (prosome, macropain) subunit, alpha type, 5 [Pan
troglodytes]
gi|417397701|gb|JAA45884.1| Putative 20s proteasome regulatory subunit alpha type psma5/pup2
[Desmodus rotundus]
gi|431896452|gb|ELK05864.1| Proteasome subunit alpha type-5 [Pteropus alecto]
Length = 241
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|391340615|ref|XP_003744634.1| PREDICTED: proteasome subunit alpha type-5-like [Metaseiulus
occidentalis]
Length = 242
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 23/136 (16%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y GC++ E VTS L++ S
Sbjct: 3 MTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGCVLAVEKRVTSPLME-S 61
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQ 101
T+ EK+ +ID + CAV+G+M+D+ +I+ ARV+A+ + + Y E + + + Q
Sbjct: 62 TTIEKIVEIDKFIGCAVSGLMADSRTMIDKARVEAQNHWFNYDESM---RVESCAQAVSN 118
Query: 102 LALKVLRKTMDSTSLT 117
LA+K D T+++
Sbjct: 119 LAIKFGDNDDDGTAMS 134
>gi|226499840|ref|NP_001149918.1| proteasome subunit alpha type 5 [Zea mays]
gi|242071701|ref|XP_002451127.1| hypothetical protein SORBIDRAFT_05g024560 [Sorghum bicolor]
gi|195635461|gb|ACG37199.1| proteasome subunit alpha type 5 [Zea mays]
gi|223946287|gb|ACN27227.1| unknown [Zea mays]
gi|241936970|gb|EES10115.1| hypothetical protein SORBIDRAFT_05g024560 [Sorghum bicolor]
gi|414864838|tpg|DAA43395.1| TPA: proteasome subunit alpha type [Zea mays]
Length = 237
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E VTS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID+H+ CA++G+++DA L+ ARV+ + + ++Y EP+
Sbjct: 67 IMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPM 107
>gi|8394072|ref|NP_058978.1| proteasome subunit alpha type-5 [Rattus norvegicus]
gi|464457|sp|P34064.1|PSA5_RAT RecName: Full=Proteasome subunit alpha type-5; AltName:
Full=Macropain zeta chain; AltName: Full=Multicatalytic
endopeptidase complex zeta chain; AltName:
Full=Proteasome zeta chain
gi|286254|dbj|BAA01588.1| proteasome subunit R-ZETA [Rattus sp.]
Length = 241
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEGHKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|397466400|ref|XP_003804950.1| PREDICTED: proteasome subunit alpha type-5, partial [Pan paniscus]
Length = 221
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|374633085|ref|ZP_09705452.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Metallosphaera yellowstonensis MK1]
gi|373524569|gb|EHP69446.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Metallosphaera yellowstonensis MK1]
Length = 242
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 58/105 (55%), Gaps = 20/105 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+G LYQVDY +G ++GE S+LL S EK
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTTLGVKTKSAVVIIGEKKKASQLLDVD-SIEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ-DY 90
+Y +DDHV C+ AG+ SD ILI+ AR + ++ Y EPI DY
Sbjct: 69 VYLLDDHVGCSFAGLASDGRILIDYARNSSLQHRLVYDEPISIDY 113
>gi|51968292|dbj|BAD42871.1| 20S proteasome alpha5 subunit [Xenopus laevis]
Length = 241
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTAEGVCLAVEKRITSPLMEPS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|45357814|ref|NP_987371.1| proteasome subunit alpha [Methanococcus maripaludis S2]
gi|340623432|ref|YP_004741885.1| proteasome subunit alpha [Methanococcus maripaludis X1]
gi|59798297|sp|Q6M0L9.1|PSA_METMP RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|45047374|emb|CAF29807.1| proteasome, subunit alpha [Methanococcus maripaludis S2]
gi|339903700|gb|AEK19142.1| proteasome subunit alpha [Methanococcus maripaludis X1]
Length = 259
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGCLVG-----ENNVTSKLLQTSTSAEK 46
YDR T+FSPEGRLYQV+Y + C G + +TSKL+ S S EK
Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVS-SIEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++IDDH+ A +G+++DA +LI+ AR++A+ +Y E I
Sbjct: 69 IFQIDDHIVAATSGLVADARVLIDRARIEAQMNRVSYGEAI 109
>gi|41352543|gb|AAS01024.1| proteasome alpha subunit [Ornithodoros moubata]
Length = 241
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 64/107 (59%), Gaps = 20/107 (18%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y +G L E VTS L++
Sbjct: 3 MTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRVTSPLME-P 61
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
T+ EK+ +ID H+ACAV+G+M+D+ +++ ARV+A+ + + Y E +Q
Sbjct: 62 TTIEKIVEIDTHIACAVSGLMADSRTMVDKARVEAQNHRFVYNEDMQ 108
>gi|403372927|gb|EJY86375.1| Proteasome subunit alpha type-5 [Oxytricha trifallax]
Length = 246
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 19/102 (18%)
Query: 4 RYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAE 45
YDR FSPEGR+YQ++Y G ++G E + SKL++ + S E
Sbjct: 8 HYDRGVNTFSPEGRIYQIEYAIEAIKFGSTAIGIRTNEGVVLGVEKKLPSKLMEPAKS-E 66
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
K+ ++D H CA++GI+ DA ILI+ ARV+A+ + + Y EP+
Sbjct: 67 KLVEVDRHCGCAMSGIVGDARILIDHARVEAQNHRFNYAEPM 108
>gi|342883853|gb|EGU84275.1| hypothetical protein FOXB_05232 [Fusarium oxysporum Fo5176]
Length = 345
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 61/101 (60%), Gaps = 19/101 (18%)
Query: 6 DRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEKM 47
DR FSPEGRL+QV+Y G ++G E VTS LL+TS S EK+
Sbjct: 109 DRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSTLLETS-SVEKI 167
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ID H+ CA++G+ +DA ++ ARV+++ +A+ Y EP++
Sbjct: 168 VEIDRHIGCAMSGLQADARSMVEHARVESQSHAFNYNEPLR 208
>gi|361125318|gb|EHK97365.1| putative proteasome subunit alpha type-5 [Glarea lozoyensis 74030]
Length = 254
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 62/102 (60%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
+DR FSPEGRL+QV+Y G ++G E VTS LL+TS S EK
Sbjct: 17 WDRGFGTFSPEGRLFQVEYSLEAIKLGSTAIGVATGGGVVLGVEKRVTSTLLETS-SVEK 75
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA ++ ARV+++ +A+ + EP++
Sbjct: 76 IVEIDRHIGCAMSGLQADARSMVEHARVESQNHAFHFNEPLR 117
>gi|297742930|emb|CBI35797.3| unnamed protein product [Vitis vinifera]
Length = 293
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 64 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEK 122
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID+H+ CA++G+++DA L+ ARV+ + + ++Y EP+
Sbjct: 123 IMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPM 163
>gi|54696300|gb|AAV38522.1| proteasome (prosome, macropain) subunit, alpha type, 5 [Homo
sapiens]
Length = 241
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLASTAIGIQTSEGVCLAVEKRITSPLMEPS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|255647791|gb|ACU24356.1| unknown [Glycine max]
Length = 227
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 67/119 (56%), Gaps = 22/119 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
+ +ID+H+ CA++G+++DA L+ ARV+ + + ++Y EP+ + T Q LAL+
Sbjct: 67 IMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPM---TVESTTQALCDLALR 122
>gi|351721357|ref|NP_001235159.1| proteasome subunit alpha type-5 [Glycine max]
gi|12229923|sp|Q9M4T8.1|PSA5_SOYBN RecName: Full=Proteasome subunit alpha type-5; AltName: Full=20S
proteasome alpha subunit E; AltName: Full=20S proteasome
subunit alpha-5
gi|7839485|gb|AAF70292.1|AF255338_1 20S proteasome subunit [Glycine max]
Length = 237
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 67/119 (56%), Gaps = 22/119 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
+ +ID+H+ CA++G+++DA L+ ARV+ + + ++Y EP+ + T Q LAL+
Sbjct: 67 IMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPM---TVESTTQALCDLALR 122
>gi|335775191|gb|AEH58489.1| proteasome subunit alpha type-5-like protein [Equus caballus]
Length = 215
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|442755539|gb|JAA69929.1| Putative 20s proteasome regulatory subunit alpha type psma5/pup2
[Ixodes ricinus]
Length = 241
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 64/107 (59%), Gaps = 20/107 (18%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y +G L E VTS L++
Sbjct: 3 MTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTAEGVVLAVEKRVTSPLME-P 61
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
T+ EK+ +ID+H+ CAV+G+M+D+ +++ ARV+A+ + + Y E +Q
Sbjct: 62 TTIEKIVEIDNHIGCAVSGLMADSRTMVDRARVEAQNHWFLYNEKMQ 108
>gi|225441985|ref|XP_002265563.1| PREDICTED: proteasome subunit alpha type-5 isoform 1 [Vitis
vinifera]
gi|359482854|ref|XP_003632854.1| PREDICTED: proteasome subunit alpha type-5 [Vitis vinifera]
gi|147791356|emb|CAN66160.1| hypothetical protein VITISV_007438 [Vitis vinifera]
Length = 237
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID+H+ CA++G+++DA L+ ARV+ + + ++Y EP+
Sbjct: 67 IMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPM 107
>gi|340374882|ref|XP_003385966.1| PREDICTED: proteasome subunit alpha type-5-like [Amphimedon
queenslandica]
Length = 242
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 61/101 (60%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MGCL-VG-----------ENNVTSKLLQTSTSAEK 46
YDR FSPEGR++QV+Y +G VG E +TS L++ S S EK
Sbjct: 8 YDRGVNTFSPEGRIFQVEYAIEAIKLGSTAVGIRTSEGVVMAVEKRITSPLMEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID H+ CA++G+++D+ +++ ARV+A+ Y + Y EPI
Sbjct: 67 ILEIDSHIGCAMSGLIADSRTMVDKARVEAQNYWFIYNEPI 107
>gi|359806124|ref|NP_001241191.1| uncharacterized protein LOC100799919 [Glycine max]
gi|255641541|gb|ACU21044.1| unknown [Glycine max]
Length = 237
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 67/119 (56%), Gaps = 22/119 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
+ +ID+H+ CA++G+++DA L+ ARV+ + + ++Y EP+ + T Q LAL+
Sbjct: 67 IMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPM---TVESTTQALCDLALR 122
>gi|351726355|ref|NP_001235588.1| uncharacterized protein LOC100499756 [Glycine max]
gi|255626321|gb|ACU13505.1| unknown [Glycine max]
Length = 237
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 67/119 (56%), Gaps = 22/119 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
+ +ID+H+ CA++G+++DA L+ ARV+ + + ++Y EP+ + T Q LAL+
Sbjct: 67 IMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPM---TVESTTQALCDLALR 122
>gi|358384785|gb|EHK22382.1| hypothetical protein TRIVIDRAFT_78893 [Trichoderma virens Gv29-8]
Length = 245
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 20/106 (18%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y G ++G E VTS LL+TS
Sbjct: 3 MARSEYDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGIATSEGVILGVEKRVTSSLLETS 62
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EK+ +ID H+ CA++G+ +DA +I ARV+ + +A+ Y E +
Sbjct: 63 -SVEKIVEIDRHIGCAMSGLQADARSMIEHARVECQSHAFNYNESL 107
>gi|427787491|gb|JAA59197.1| Putative 20s proteasome regulatory subunit alpha type psma5/pup2
[Rhipicephalus pulchellus]
Length = 241
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 64/107 (59%), Gaps = 20/107 (18%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y +G L E VTS L++
Sbjct: 3 MTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRVTSPLME-P 61
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
T+ EK+ +ID+H+ CAV+G+M+D+ +++ ARV+A+ + + Y E +Q
Sbjct: 62 TTIEKIVEIDNHIGCAVSGLMADSRTMVDRARVEAQNHWFLYNEKMQ 108
>gi|124512076|ref|XP_001349171.1| proteasome subunit alpha type 5, putative [Plasmodium falciparum
3D7]
gi|23498939|emb|CAD51017.1| proteasome subunit alpha type 5, putative [Plasmodium falciparum
3D7]
Length = 256
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-MGC-----------------LVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E ++S L++ S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYALGAIKLGSTAVGICVNDGVILASERRISSTLIEKD-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ IDDH+ CA++G+M+DA LI+ ARV+ Y + Y E I
Sbjct: 67 LLSIDDHIGCAMSGLMADARTLIDYARVECNHYKFIYNENIN 108
>gi|255647525|gb|ACU24226.1| unknown [Glycine max]
Length = 237
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID+H+ CA++G+++DA L+ ARV+ + + ++Y EP+
Sbjct: 67 IMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPM 107
>gi|19115284|ref|NP_594372.1| 20S proteasome component alpha 5, Pup2 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|12229941|sp|Q9UT97.1|PSA5_SCHPO RecName: Full=Probable proteasome subunit alpha type-5
gi|5777696|emb|CAB53405.1| 20S proteasome component alpha 5, Pup2 (predicted)
[Schizosaccharomyces pombe]
Length = 247
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 60/105 (57%), Gaps = 20/105 (19%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y ++G E +TS L++ S
Sbjct: 3 MTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLME-S 61
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
S EK+++ID H+ CA++G+ +DA +I ARVQ + + + Y EP
Sbjct: 62 HSVEKLFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEP 106
>gi|392570611|gb|EIW63783.1| proteasome subunit alpha type 5 [Trametes versicolor FP-101664 SS1]
Length = 242
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 22/138 (15%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E V S LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTTVGVRTPEGVVLGVEKRVQSPLLEAS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID H+ CA++G+ +DA +I+ ARV A+ +A+ Y E I + + Q LAL+
Sbjct: 67 IMEIDRHLGCAMSGLTADARTMIDHARVTAQNHAFTYDEAI---RVESATQAVCDLALRF 123
Query: 107 LRKTMDSTSLTSEKLELA 124
D ++ S +A
Sbjct: 124 GESVHDEDAMMSRPFGVA 141
>gi|405124145|gb|AFR98907.1| proteasome subunit alpha type 5 [Cryptococcus neoformans var.
grubii H99]
Length = 243
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 73/143 (51%), Gaps = 23/143 (16%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y +G L E V S LL++S
Sbjct: 3 MTRSEYDRGVNTFSPEGRLFQVEYAMEAIKLGSTTVGITTPHGTVLAVEKRVPSPLLESS 62
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQ 101
S EK+ +ID H+ CA++G+ +DA ++ ARV ++ +A+ Y EPI + Q
Sbjct: 63 -SIEKIMEIDSHIGCAMSGLTADARTMVEHARVTSQMHAFTYDEPI---GVESCTQAVCD 118
Query: 102 LALKVLRKTMDSTSLTSEKLELA 124
LAL+ D +L S +A
Sbjct: 119 LALRFGESVEDDDALMSRPFGVA 141
>gi|356534412|ref|XP_003535749.1| PREDICTED: proteasome subunit alpha type-5-like [Glycine max]
Length = 236
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID+H+ CA++G+++DA L+ ARV+ + + ++Y EP+
Sbjct: 67 IMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPM 107
>gi|260788842|ref|XP_002589458.1| hypothetical protein BRAFLDRAFT_280892 [Branchiostoma floridae]
gi|229274635|gb|EEN45469.1| hypothetical protein BRAFLDRAFT_280892 [Branchiostoma floridae]
Length = 241
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 58/99 (58%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+Q++Y +G L E +TS L+ STS EK
Sbjct: 8 YDRGVNTFSPEGRLFQIEYAIEAIKLGSTAIGIQTSEGIVLAVEKRITSPLM-VSTSVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ ++D H+ CAV+G+++D+ +I+ ARV+A+ Y + Y E
Sbjct: 67 IVEVDSHIGCAVSGLVADSRTMIDKARVEAQNYWFTYNE 105
>gi|83285957|ref|XP_729951.1| proteasome subunit alpha type 5 [Plasmodium yoelii yoelii 17XNL]
gi|23489205|gb|EAA21516.1| proteasome subunit alpha type 5 [Plasmodium yoelii yoelii]
Length = 256
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-MGC-----------------LVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E + S L++ S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYALGAIKLGSTAIGICVNDGVILASERRIASPLIEKD-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ IDDH+ CA++G+M+DA LI+ ARV+ Y + Y E I
Sbjct: 67 LLPIDDHIGCAMSGLMADARTLIDHARVECNHYKFIYNENIN 108
>gi|395335098|gb|EJF67474.1| proteasome subunit alpha type 5 [Dichomitus squalens LYAD-421 SS1]
Length = 242
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 72/138 (52%), Gaps = 22/138 (15%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E V S LL++S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTTVGVRTPEGVVLGVEKRVQSPLLESS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID H+ CA++G+ +DA +I+ ARV ++ +A+ Y E I K + Q LAL+
Sbjct: 67 IMEIDRHLGCAMSGLTADARTMIDHARVTSQNHAFTYDERI---KVESVTQAVCDLALRF 123
Query: 107 LRKTMDSTSLTSEKLELA 124
D ++ S +A
Sbjct: 124 GESVHDEDAMMSRPFGVA 141
>gi|68075625|ref|XP_679732.1| proteasome subunit alpha type 5 [Plasmodium berghei strain ANKA]
gi|56500546|emb|CAH94596.1| proteasome subunit alpha type 5, putative [Plasmodium berghei]
Length = 252
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-MGC-----------------LVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E + S L++ S EK
Sbjct: 4 YDRGVNTFSPEGRLFQVEYALGAIKLGSTAIGICVNDGVILASERRIASPLIEKD-SVEK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ IDDH+ CA++G+M+DA LI+ ARV+ Y + Y E I
Sbjct: 63 LLPIDDHIGCAMSGLMADARTLIDHARVECNHYKFIYNENIN 104
>gi|134046449|ref|YP_001097934.1| proteasome subunit alpha [Methanococcus maripaludis C5]
gi|166199285|sp|A4FZT6.1|PSA_METM5 RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|132664074|gb|ABO35720.1| proteasome subunit alpha 4 [Methanococcus maripaludis C5]
Length = 259
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGCLVG-----ENNVTSKLLQTSTSAEK 46
YDR T+FSPEGRLYQV+Y + C G + +TSKL+ S S EK
Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVS-SIEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++IDDH+ A +G+++DA +LI+ AR++A+ +Y E I
Sbjct: 69 IFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAI 109
>gi|448738996|ref|ZP_21721016.1| proteasome subunit alpha [Halococcus thailandensis JCM 13552]
gi|445800810|gb|EMA51158.1| proteasome subunit alpha [Halococcus thailandensis JCM 13552]
Length = 245
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 59/101 (58%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR TT+FSP+GRLYQV+Y +G LV E V S L++ S S EK
Sbjct: 10 YDRGTTIFSPDGRLYQVEYAREAVERGSTSLGVRTEEGVVLVAEQQVRSPLMEGS-SIEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K+DDH+A AG ++DA L++ AR QA+ Y EPI
Sbjct: 69 LHKVDDHIAVGSAGHVADARQLVDFAREQAQVERLRYGEPI 109
>gi|288930694|ref|YP_003434754.1| proteasome endopeptidase complex, subunit alpha [Ferroglobus
placidus DSM 10642]
gi|288892942|gb|ADC64479.1| proteasome endopeptidase complex, alpha subunit [Ferroglobus
placidus DSM 10642]
Length = 241
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L+ + V S+LL+ T EK
Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKRGATAIGVKTKEGVVLLADRRVASRLLEADT-IEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+YKID+H+ A +G+++DA +LI+ AR++A+ Y EPI
Sbjct: 67 IYKIDEHICAATSGLVADARVLIDRARLEAQINRLTYDEPI 107
>gi|47227266|emb|CAF96815.1| unnamed protein product [Tetraodon nigroviridis]
Length = 241
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 19/102 (18%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ + S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPN-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E +
Sbjct: 66 KIVEIDSHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETL 107
>gi|430811305|emb|CCJ31228.1| unnamed protein product [Pneumocystis jirovecii]
Length = 239
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 20/102 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY-----------------MGCLVG-ENNVTSKLLQTSTSAE 45
YDR + +SPEGRLYQV+Y G L+G E +TS L++ + E
Sbjct: 7 EYDRNSHAYSPEGRLYQVEYAIEAIKLGATTMGLATPQGVLLGAEKRITSSLMEPLS--E 64
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
K+ +ID H+ C+++G+ +DA IL++ ARV+++ + + Y EPI
Sbjct: 65 KIMEIDTHIGCSMSGLTADARILVDHARVESQNHRFTYDEPI 106
>gi|70942672|ref|XP_741474.1| proteasome subunit alpha type 5 [Plasmodium chabaudi chabaudi]
gi|56519877|emb|CAH80835.1| proteasome subunit alpha type 5, putative [Plasmodium chabaudi
chabaudi]
Length = 252
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-MGC-----------------LVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E + S L++ S EK
Sbjct: 4 YDRGVNTFSPEGRLFQVEYALGAIKLGSTAIGICVDDGVILASERRIASPLIEKD-SIEK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ IDDH+ CA++G+M+DA LI+ ARV+ Y + Y E I
Sbjct: 63 LLPIDDHIGCAMSGLMADARTLIDHARVECNHYKFVYNENIN 104
>gi|150403173|ref|YP_001330467.1| proteasome subunit alpha [Methanococcus maripaludis C7]
gi|166199286|sp|A6VIP0.1|PSA_METM7 RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|150034203|gb|ABR66316.1| Proteasome endopeptidase complex [Methanococcus maripaludis C7]
Length = 259
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGCLVG-----ENNVTSKLLQTSTSAEK 46
YDR T+FSPEGRLYQV+Y + C G + +TSKL+ S S EK
Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVS-SIEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++IDDH+ A +G+++DA +LI+ AR++A+ +Y E I
Sbjct: 69 IFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAI 109
>gi|410920367|ref|XP_003973655.1| PREDICTED: proteasome subunit alpha type-5-like [Takifugu rubripes]
Length = 241
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ + S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPN-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDSHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|145490251|ref|XP_001431126.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398229|emb|CAK63728.1| unnamed protein product [Paramecium tetraurelia]
Length = 243
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MGC------------LVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L GE + S LL+ S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYALQAIKLGASALAIKVNDGVVLAGERKLNSTLLEPR-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+Y+ID H+AC +G + DA L+ ARV+++ + + Y EPI
Sbjct: 67 IYEIDTHIACTASGFIPDARTLVEHARVESQNHKFNYGEPI 107
>gi|159905089|ref|YP_001548751.1| proteasome subunit alpha [Methanococcus maripaludis C6]
gi|229598015|sp|A9A846.1|PSA_METM6 RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|159886582|gb|ABX01519.1| Proteasome endopeptidase complex [Methanococcus maripaludis C6]
Length = 259
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGC-----LVGENNVTSKLLQTSTSAEK 46
YDR T+FSPEGRLYQV+Y + C L + +TSKL+ S S EK
Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCNDGVVLAVDRRITSKLIDVS-SIEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++IDDH+ A +G+++DA +LI+ AR++A+ +Y E I
Sbjct: 69 IFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAI 109
>gi|148233324|ref|NP_001085788.1| proteasome (prosome, macropain) subunit, alpha type, 5 [Xenopus
laevis]
gi|49118346|gb|AAH73346.1| MGC80760 protein [Xenopus laevis]
Length = 247
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTAEGVCLAVEKRITSPLMEPS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|348508050|ref|XP_003441568.1| PREDICTED: proteasome subunit alpha type-5-like [Oreochromis
niloticus]
Length = 241
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ + S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPN-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDSHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|328768571|gb|EGF78617.1| hypothetical protein BATDEDRAFT_30413 [Batrachochytrium
dendrobatidis JAM81]
Length = 243
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 22/120 (18%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G L E VTS LL++S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGIQTSEGVVLAVEKRVTSPLLESS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
K+ +ID H+ CA++G+++D+ +I+ ARV+A+ + + Y E I K + Q LAL+
Sbjct: 66 KVMEIDSHLGCAMSGLIADSRTMIDHARVEAQNHWFTYNEKI---KVESVSQAVCDLALR 122
>gi|326428325|gb|EGD73895.1| proteasome subunit alpha type-5 [Salpingoeca sp. ATCC 50818]
Length = 263
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 61/106 (57%), Gaps = 20/106 (18%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTS 41
M+R YDR FSPEGR++QV+Y G ++ E VTS L++
Sbjct: 3 MTRSEYDRGVNTFSPEGRIFQVEYANEAIKLGATAIGIQTNEGVIIAVEKRVTSPLMEPE 62
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S K+++ID H+ACA++G+ +DA LI ARV+A+ Y + Y EP+
Sbjct: 63 -SVPKIFEIDAHLACAMSGLNADARTLIERARVEAQNYWFTYNEPM 107
>gi|169845445|ref|XP_001829442.1| proteasome subunit alpha type 5 [Coprinopsis cinerea okayama7#130]
gi|116509507|gb|EAU92402.1| proteasome subunit alpha type 5 [Coprinopsis cinerea okayama7#130]
Length = 242
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 22/138 (15%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E V S LL++S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTTVGIKTPEGVVLAVEKRVQSPLLESS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID H+ CA++G+ +DA +I+ ARV A+ +A+ Y E I K + Q LAL+
Sbjct: 67 IMEIDTHLGCAMSGLTADARTMIDHARVTAQNHAFTYDERI---KVESVTQAVCDLALRF 123
Query: 107 LRKTMDSTSLTSEKLELA 124
D ++ S +A
Sbjct: 124 GESVHDEEAMMSRPFGVA 141
>gi|448727989|ref|ZP_21710329.1| proteasome subunit alpha [Halococcus morrhuae DSM 1307]
gi|445788655|gb|EMA39361.1| proteasome subunit alpha [Halococcus morrhuae DSM 1307]
Length = 233
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 59/101 (58%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR TT+FSP+GRLYQV+Y +G LV E V S L++ S S EK
Sbjct: 10 YDRGTTIFSPDGRLYQVEYAREAVERGSTSLGVRTADGVVLVAEQRVRSPLMEGS-SIEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K+DDH+A AG ++DA L++ AR QA+ Y EPI
Sbjct: 69 LHKVDDHIAVGSAGHVADARQLVDFAREQAQVEQLRYGEPI 109
>gi|395645193|ref|ZP_10433053.1| proteasome endopeptidase complex, alpha subunit [Methanofollis
liminatans DSM 4140]
gi|395441933|gb|EJG06690.1| proteasome endopeptidase complex, alpha subunit [Methanofollis
liminatans DSM 4140]
Length = 248
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 64/102 (62%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGC-----LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRLYQV+Y + C L+ + V+S+LL+ + S EK
Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCSEGVILLVDKRVSSRLLEPA-SIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+Y+ID+H+ A +G++ DA +L++ ARV+A+ +Y EPI+
Sbjct: 68 IYQIDEHIGVASSGLVGDARLLVDRARVEAQINRVSYDEPIE 109
>gi|197129876|gb|ACH46374.1| putative proteasome alpha 5 subunit [Taeniopygia guttata]
Length = 241
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
++ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 EIVEIDSHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|392597918|gb|EIW87240.1| proteasome subunit alpha type 5 [Coniophora puteana RWD-64-598 SS2]
Length = 242
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 75/146 (51%), Gaps = 25/146 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++ E V S LL++S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTTVGIRTSEGVVIAVEKRVQSPLLESS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID H+ CA++G+ +DA +I+ ARV A+ +A+ Y E I K + Q LAL+
Sbjct: 67 IMEIDTHLGCAMSGLTADARTMIDHARVTAQNHAFTYDERI---KVESATQAVCDLALRF 123
Query: 107 LRKTMDSTSLTSEKLELAEVFLLPSG 132
D ++ S +A LL +G
Sbjct: 124 GESVHDEEAMMSRPFGVA---LLIAG 146
>gi|358393693|gb|EHK43094.1| alpha subunit Pup2 of the 20S proteasome [Trichoderma atroviride
IMI 206040]
Length = 245
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 62/106 (58%), Gaps = 20/106 (18%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y G ++G E VTS LL+TS
Sbjct: 3 MARSEYDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGIATSEGVILGVEKRVTSSLLETS 62
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EK+ +ID H+ CA++G+ +DA ++ ARV+ + +A+ Y E +
Sbjct: 63 -SVEKIVEIDRHIGCAMSGLQADARSMVEHARVECQSHAFNYNESL 107
>gi|219121310|ref|XP_002185881.1| proteasome subunit alpha [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582730|gb|ACI65351.1| proteasome subunit alpha [Phaeodactylum tricornutum CCAP 1055/1]
Length = 245
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y GC++ E ++S LL S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGLQTKDGCILAVEKRLSSPLLDPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ ++D H+ A++G+++DA L++ ARV+A+ + + Y EPI
Sbjct: 67 IAEVDSHIGAAMSGLVADARTLVDHARVEAQNHTFTYDEPI 107
>gi|171688558|ref|XP_001909219.1| hypothetical protein [Podospora anserina S mat+]
gi|170944241|emb|CAP70351.1| unnamed protein product [Podospora anserina S mat+]
Length = 245
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 20/107 (18%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDY-----------------MGCLVG-ENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y G ++G E VTS LL+TS
Sbjct: 3 MARSEYDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGISTSTGVILGVEKRVTSSLLETS 62
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
S EK+ +ID H+ CA++G+ +DA ++ ARV+ + +A+ Y E ++
Sbjct: 63 -SVEKIVEIDRHIGCAMSGLQADARSMVEHARVECQSHAFNYNENLR 108
>gi|258577477|ref|XP_002542920.1| proteasome component PUP2 [Uncinocarpus reesii 1704]
gi|237903186|gb|EEP77587.1| proteasome component PUP2 [Uncinocarpus reesii 1704]
Length = 246
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 63/102 (61%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
Y + ++ FSPEGRL+QV+Y G ++G E VTS LL+TS S EK
Sbjct: 8 YAKPSSTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVVLGVEKRVTSTLLETS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA +I ARV+++ + + Y+EP++
Sbjct: 67 IVEIDRHIGCAMSGLQADARSMIEHARVESQNHEFHYKEPLR 108
>gi|156095149|ref|XP_001613610.1| proteasome subunit alpha type 7-2 [Plasmodium vivax Sal-1]
gi|148802484|gb|EDL43883.1| proteasome subunit alpha type 7-2, putative [Plasmodium vivax]
Length = 256
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-MGC-----------------LVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E + S L++ S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYALGAIKLGSTAVGICVNDGVILASERRIASALIEKD-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ IDDH+ CA++G+M+DA LI+ ARV+ Y + Y E I
Sbjct: 67 LLPIDDHIGCAMSGLMADARTLIDYARVECNHYKFIYNENIN 108
>gi|58270336|ref|XP_572324.1| proteasome subunit alpha type 5 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134117764|ref|XP_772516.1| hypothetical protein CNBL1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255130|gb|EAL17869.1| hypothetical protein CNBL1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228582|gb|AAW45017.1| proteasome subunit alpha type 5, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 270
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 22/138 (15%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E V S LL++S S EK
Sbjct: 35 YDRGVNTFSPEGRLFQVEYAMEAIKLGSTTVGITTPHGTVLAVEKRVPSPLLESS-SIEK 93
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID H+ CA++G+ +DA ++ ARV ++ +A+ Y EPI + Q LAL+
Sbjct: 94 IMEIDSHIGCAMSGLTADARTMVEHARVTSQMHAFTYDEPI---GVESCTQAVCDLALRF 150
Query: 107 LRKTMDSTSLTSEKLELA 124
D +L S +A
Sbjct: 151 GESVEDDDALMSRPFGVA 168
>gi|389581932|dbj|GAB64653.1| proteasome subunit alpha type 7-2 [Plasmodium cynomolgi strain B]
Length = 256
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-MGC-----------------LVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E + S L++ S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYALGAIKLGSTAVGICVNDGVILASERRIASALIEKH-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ IDDH+ CA++G+M+DA LI+ ARV+ Y + Y E I
Sbjct: 67 LLPIDDHIGCAMSGLMADARTLIDYARVECNHYKFIYNENIN 108
>gi|321264506|ref|XP_003196970.1| proteasome subunit alpha type 5 [Cryptococcus gattii WM276]
gi|317463448|gb|ADV25183.1| Proteasome subunit alpha type 5, putative [Cryptococcus gattii
WM276]
Length = 277
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 22/138 (15%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E V S LL++S S EK
Sbjct: 42 YDRGVNTFSPEGRLFQVEYAMEAIKLGSTTVGITTPHGTVLAVEKRVPSPLLESS-SIEK 100
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID H+ CA++G+ +DA ++ ARV ++ +A+ Y EPI + Q LAL+
Sbjct: 101 IMEIDSHIGCAMSGLTADARTMVEHARVTSQMHAFTYDEPI---GVESCTQAVCDLALRF 157
Query: 107 LRKTMDSTSLTSEKLELA 124
D +L S +A
Sbjct: 158 GESVEDDDALMSRPFGVA 175
>gi|145495683|ref|XP_001433834.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400954|emb|CAK66437.1| unnamed protein product [Paramecium tetraurelia]
Length = 243
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MGC------------LVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L GE + S LL+ S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYALQAIKLGASALAIKVNEGVVLAGERKLNSTLLEPK-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+Y+ID H+AC +G + DA L+ ARV+++ + + Y EPI
Sbjct: 67 VYEIDTHLACTASGFIPDARTLVEHARVESQNHKFNYGEPI 107
>gi|432330570|ref|YP_007248713.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Methanoregula formicicum SMSP]
gi|432137279|gb|AGB02206.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Methanoregula formicicum SMSP]
Length = 240
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 62/102 (60%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRLYQV+Y +G L+ + V+SKLL+ S S EK
Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKAKDGVVLIVDKRVSSKLLEAS-SIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
++KID+H+ A +G++ DA L++ ARV+ + +Y EPI+
Sbjct: 68 IFKIDEHIGVASSGLVGDARALVDRARVECQINRVSYDEPIE 109
>gi|242787874|ref|XP_002481105.1| proteasome component Pup2, putative [Talaromyces stipitatus ATCC
10500]
gi|218721252|gb|EED20671.1| proteasome component Pup2, putative [Talaromyces stipitatus ATCC
10500]
Length = 245
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E VTS LL+TS S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVVLGVEKRVTSSLLETS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA +I ARV+ + +A+ + E ++
Sbjct: 67 IVEIDQHIGCAMSGLQADARSMIEHARVECQNHAFHFAESLR 108
>gi|432859661|ref|XP_004069204.1| PREDICTED: proteasome subunit alpha type-5-like [Oryzias latipes]
Length = 241
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ + S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPN-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDTHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|320588907|gb|EFX01375.1| proteasome component pup2 [Grosmannia clavigera kw1407]
Length = 253
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 62/106 (58%), Gaps = 20/106 (18%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y G ++G E VTS L++ S
Sbjct: 3 MARSEYDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATAEGVILGVEKRVTSTLMEVS 62
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EK+ +ID H+ CA++G+ +DA ++ ARV+ + +A+ Y EP+
Sbjct: 63 -SVEKIVEIDRHIGCAMSGLQADARSMVEHARVECQSHAFNYAEPL 107
>gi|229367530|gb|ACQ58745.1| Proteasome subunit alpha type-5 [Anoplopoma fimbria]
Length = 241
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ + S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPN-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDTHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|308322205|gb|ADO28240.1| proteasome subunit alpha type-5 [Ictalurus furcatus]
Length = 241
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ + S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPN-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDTHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|346469699|gb|AEO34694.1| hypothetical protein [Amblyomma maculatum]
Length = 241
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 63/107 (58%), Gaps = 20/107 (18%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y +G L E VTS L++
Sbjct: 3 MTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTTEGVVLAVEKRVTSSLME-P 61
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
T+ EK+ +ID H+ CAV+G+M+D+ +++ ARV+A+ + + Y E +Q
Sbjct: 62 TTIEKIVEIDTHIGCAVSGLMADSRTMVDRARVEAQNHWFLYNEKMQ 108
>gi|336267810|ref|XP_003348670.1| hypothetical protein SMAC_01694 [Sordaria macrospora k-hell]
gi|380093927|emb|CCC08144.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 245
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 20/107 (18%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y G ++G E VTS LL+TS
Sbjct: 3 MARSEYDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSTLLETS 62
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
S EK+ +ID H+ CA++G+ +DA ++ ARV+ + +A+ Y E ++
Sbjct: 63 -SVEKIVEIDRHIGCAMSGLQADARSMVEHARVECQSHAFNYNEKLR 108
>gi|50551999|ref|XP_503474.1| YALI0E02794p [Yarrowia lipolytica]
gi|49649343|emb|CAG79053.1| YALI0E02794p [Yarrowia lipolytica CLIB122]
Length = 253
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR + FSPEGRL+QV+Y G ++G E +TS LL+ S S EK
Sbjct: 8 YDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGVATKDGVVLGVEKRITSSLLEAS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID H+ CA++G+ +DA +I+ ARV++ ++ Y EPI
Sbjct: 67 IVEIDKHIGCAMSGLTADARTMIDHARVESVQHDLYYDEPI 107
>gi|124486159|ref|YP_001030775.1| proteasome subunit alpha [Methanocorpusculum labreanum Z]
gi|124363700|gb|ABN07508.1| Proteasome endopeptidase complex [Methanocorpusculum labreanum Z]
Length = 272
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 41/181 (22%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGCLVG-----ENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y + C G + V S+LL+ S S EK
Sbjct: 11 YDRAITMFSPDGRLYQVEYAREAVKRGTTAVGIKCKTGVVLLVDKRVNSRLLEPS-SIEK 69
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+++ID+H+ A +G++ DA IL++ AR++A+ +Y EP+ V+ K
Sbjct: 70 IFRIDEHIGVASSGLVGDARILVDRARIEAQINRVSYGEPVD-----------VETLAKK 118
Query: 107 LRKTMDSTSLTSEKLELAEVFLL------PSGKVKYRICSPESLTMLLE----NFGVAQP 156
L M S +L L+ P+G KY + + LLE G+ +P
Sbjct: 119 LCDHMQSYTLFGGARPYGTALLIAGAESSPTG-TKYHLFETDPSGTLLEYSATGIGIGRP 177
Query: 157 A 157
A
Sbjct: 178 A 178
>gi|29726314|pdb|1J2P|A Chain A, Alpha-Ring From The Proteasome From Archaeoglobus Fulgidus
gi|29726315|pdb|1J2P|B Chain B, Alpha-Ring From The Proteasome From Archaeoglobus Fulgidus
gi|29726316|pdb|1J2P|C Chain C, Alpha-Ring From The Proteasome From Archaeoglobus Fulgidus
gi|29726317|pdb|1J2P|D Chain D, Alpha-Ring From The Proteasome From Archaeoglobus Fulgidus
gi|29726318|pdb|1J2P|E Chain E, Alpha-Ring From The Proteasome From Archaeoglobus Fulgidus
gi|29726319|pdb|1J2P|F Chain F, Alpha-Ring From The Proteasome From Archaeoglobus Fulgidus
gi|29726320|pdb|1J2P|G Chain G, Alpha-Ring From The Proteasome From Archaeoglobus Fulgidus
Length = 246
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGC-----LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y + C L+ + V SKLL+ T EK
Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKRGATAIGIKCKEGVILIADKRVGSKLLEKDT-IEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+YKID+H+ A +G+++DA +LI+ AR++A+ Y PI
Sbjct: 67 IYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDIPI 107
>gi|393245297|gb|EJD52808.1| proteasome subunit alpha type 4 [Auricularia delicata TFB-10046
SS5]
Length = 261
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 26/113 (23%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-----------------GCLV-GENNVTSKLLQTST 42
M+RRYD +TT+FSPEGRLYQ++Y G +V E VT KLL S+
Sbjct: 1 MARRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLAVLAKDGVVVAAEKKVTGKLLDLSS 60
Query: 43 --------SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EK++ ++ +V VAG +DAN L+N +R A+R+ ++Y E I
Sbjct: 61 VKEGGYGGSGEKIFLLNRNVIAGVAGYSADANSLVNFSRQAAQRHLFSYNEDI 113
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFL-LPSGKVKYRICSPESLTM 146
Q+YKDD+T ++AV+L ++V+ KTMDST+L+SEKLE A + L + + K +I P +
Sbjct: 185 QEYKDDITVEDAVELVIRVMSKTMDSTTLSSEKLEFATLTLDAETNQPKAKIFRPADVDA 244
Query: 147 LLENFGVAQPASEV 160
LL G+ + +V
Sbjct: 245 LLAKQGIGKKDGDV 258
>gi|159478278|ref|XP_001697231.1| 20S proteasome alpha subunit E [Chlamydomonas reinhardtii]
gi|158274705|gb|EDP00486.1| 20S proteasome alpha subunit E [Chlamydomonas reinhardtii]
Length = 241
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 22/119 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYALEAIKLGSTAIGICTKEGVVLAVEKRITSPLLEPS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
+ +ID+H+ACA++G+ +DA LI+ AR +++ ++Y EP+ + T Q LAL+
Sbjct: 67 IMEIDEHMACAMSGLTADAKTLIDHARADTQQHRFSYNEPM---PIESTTQSLCDLALR 122
>gi|145545572|ref|XP_001458470.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426290|emb|CAK91073.1| unnamed protein product [Paramecium tetraurelia]
Length = 142
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MGC------------LVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L GE + S LL+ S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYALQAIKLGASALAIKVNDGVVLAGERKLNSTLLEPR-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+Y+ID H+AC +G + DA L+ ARV+++ + + Y EPI
Sbjct: 67 IYEIDTHIACTASGFIPDARTLVEHARVESQNHKFNYGEPIN 108
>gi|291243435|ref|XP_002741602.1| PREDICTED: proteasome alpha 5 subunit-like [Saccoglossus
kowalevskii]
Length = 241
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 60/100 (60%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y G ++ E +TS L++ TS E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIKTSEGVVIAVEKRITSSLME-PTSIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ ++D H+ACA++G+++D+ I+++ ARV+A+ + + Y E
Sbjct: 66 KIVEVDTHIACAMSGLIADSRIMVDKARVEAQNHWFTYNE 105
>gi|389742034|gb|EIM83221.1| proteasome subunit alpha type 5 [Stereum hirsutum FP-91666 SS1]
Length = 242
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 71/138 (51%), Gaps = 22/138 (15%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E V S LL++S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTTVGVATPEGVVLGVEKRVQSPLLESS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID H+ CA++G+ +DA +I+ ARV A+ + + Y E I + + Q LAL+
Sbjct: 67 IMEIDSHLGCAMSGLTADARTMIDHARVTAQNHNFTYDEKI---RVESATQAVCDLALRF 123
Query: 107 LRKTMDSTSLTSEKLELA 124
D ++ S +A
Sbjct: 124 GESVHDEDAMMSRPFGVA 141
>gi|388491684|gb|AFK33908.1| unknown [Lotus japonicus]
Length = 237
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 22/119 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
+ +ID H+ CA++G+++DA L+ ARV+ + + ++Y EP+ + T Q LAL+
Sbjct: 67 IMEIDAHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPM---TVESTTQALCDLALR 122
>gi|221121088|ref|XP_002158188.1| PREDICTED: proteasome subunit alpha type-5-like [Hydra
magnipapillata]
Length = 242
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR +FSPEGRL+QV+Y +G L E +TS L+ S EK
Sbjct: 8 YDRGVNLFSPEGRLFQVEYAIEAIKLGSTAIGIQTAEGVVLAVERRITSPLI-IPKSIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+Y++D H+ CA++G+++D+ +I+ AR++ + + + Y EPI
Sbjct: 67 IYEVDTHIGCAMSGLIADSRTMIDKARIEGQNHWFTYNEPI 107
>gi|389635341|ref|XP_003715323.1| proteasome component PUP2 [Magnaporthe oryzae 70-15]
gi|351647656|gb|EHA55516.1| proteasome component PUP2 [Magnaporthe oryzae 70-15]
gi|440464969|gb|ELQ34317.1| proteasome component PUP2 [Magnaporthe oryzae Y34]
gi|440480865|gb|ELQ61505.1| proteasome component PUP2 [Magnaporthe oryzae P131]
Length = 245
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 23/124 (18%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y G ++G E VTS LL+TS
Sbjct: 3 MARSEYDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVVLGVEKRVTSTLLETS 62
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQ 101
S EK+ +ID H+ CA++G+ +DA ++ ARV+ + +A+ Y E D + + Q
Sbjct: 63 -SVEKIVEIDRHIGCAMSGLQADARSMVEHARVECQSHAFNYNE---DLRVESCTQAICD 118
Query: 102 LALK 105
LAL+
Sbjct: 119 LALR 122
>gi|58268316|ref|XP_571314.1| proteasome subunit alpha type 4 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134113158|ref|XP_774604.1| hypothetical protein CNBF2840 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257248|gb|EAL19957.1| hypothetical protein CNBF2840 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227549|gb|AAW44007.1| proteasome subunit alpha type 4, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 285
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 61/122 (50%), Gaps = 35/122 (28%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYMG------------------CLVGENNVTSKLLQTS- 41
M+RRYD +TT+FSPEGRLYQV+Y + E VT KLL S
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTVLAVLSKEGIAMAAEKKVTGKLLDLSL 60
Query: 42 ----------------TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
EK++ +++++ +AGI SDAN L+N AR A+R+ ++Y E
Sbjct: 61 TPGAGVGGEGTEAWMGGGGEKIFLLNNNILAGLAGITSDANSLVNFARNSAQRHLFSYDE 120
Query: 86 PI 87
I
Sbjct: 121 DI 122
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGK 133
QDYK+D++ ++A L LKV+ KTMDST L+SEKLE A + L P K
Sbjct: 194 QDYKEDLSLEDAKGLCLKVMSKTMDSTKLSSEKLEFATMTLHPETK 239
>gi|388509786|gb|AFK42959.1| unknown [Lotus japonicus]
Length = 237
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 22/119 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGPTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
+ +ID H+ CA++G+++DA L+ ARV+ + + ++Y EP+ + T Q LAL+
Sbjct: 67 IMEIDAHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPM---TVESTTQALCDLALR 122
>gi|307594924|ref|YP_003901241.1| proteasome endopeptidase complex subunit alpha [Vulcanisaeta
distributa DSM 14429]
gi|307550125|gb|ADN50190.1| proteasome endopeptidase complex, alpha subunit [Vulcanisaeta
distributa DSM 14429]
Length = 247
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 53/101 (52%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYMG------------------CLVGENNVTSKLLQTSTSAEK 46
YDR T+FSPEG LYQV Y G L E S L+ S S EK
Sbjct: 9 YDRAITIFSPEGELYQVRYAGEAVKRGWATVGIKCVDGVVLAAEKRKVSALIDLS-SIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+Y IDDHV A +G++SDA +LI AR +A+ + Y EPI
Sbjct: 68 VYMIDDHVGIAASGLLSDARVLIEYARQEAQTHKLLYDEPI 108
>gi|212543835|ref|XP_002152072.1| proteasome component Pup2, putative [Talaromyces marneffei ATCC
18224]
gi|210066979|gb|EEA21072.1| proteasome component Pup2, putative [Talaromyces marneffei ATCC
18224]
Length = 245
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E VTS LL+TS S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVVLGVEKRVTSTLLETS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA +I ARV+ + +A+ + E ++
Sbjct: 67 IVEIDQHIGCAMSGLQADARSMIEHARVECQNHAFHFAESLR 108
>gi|397629616|gb|EJK69435.1| hypothetical protein THAOC_09311 [Thalassiosira oceanica]
Length = 244
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLQTKHGSVLAVEKRLTSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID HV A++G+++DA L++ ARV+A+ + + Y EPI
Sbjct: 67 IAEIDSHVGAAMSGLVADARTLVDHARVEAQNHRFTYDEPI 107
>gi|148689471|gb|EDL21418.1| mCG13747 [Mus musculus]
Length = 241
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
Y+R FSPEGRL+QV+Y +G CL E +TS L++ S S E
Sbjct: 7 EYNRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|351705601|gb|EHB08520.1| Proteasome subunit alpha type-4 [Heterocephalus glaber]
Length = 182
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 77/143 (53%), Gaps = 27/143 (18%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLVGENNVTS-------KLLQTST 42
MSRRYD +TT FSPEG LYQV Y +G L + + + KLL
Sbjct: 1 MSRRYDSRTTRFSPEGHLYQVGYAMEATGHAGTCLGILANDGVLLAAERLNIHKLLDEVF 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDY-KDDMTRQEAVQ 101
+EK+YK+++ +AC++AG I N+A + QDY + +MT + A
Sbjct: 61 FSEKIYKLNEDMACSMAGGWKATCIGNNSAA--------SVSMLKQDYIEGEMTLKLAFS 112
Query: 102 LALKVLRKTMDSTSLTSEKLELA 124
L +KVL KTMD + L++EK+E+A
Sbjct: 113 LPIKVLNKTMDVSKLSAEKVEIA 135
>gi|145592126|ref|YP_001154128.1| proteasome subunit alpha [Pyrobaculum arsenaticum DSM 13514]
gi|145283894|gb|ABP51476.1| Proteasome endopeptidase complex [Pyrobaculum arsenaticum DSM
13514]
Length = 243
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYMG------------------CLVGENNVTSKLLQTSTSAEK 46
YDR T+FSPEG++YQV+Y G L E S L +S S EK
Sbjct: 9 YDRAITIFSPEGKIYQVEYAGEAVKRGWPTVGVKCRSGVALAAEKRKISALFDSS-SLEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+Y IDDHVA + +G+++DA ILI+ AR A + + Y EPI
Sbjct: 68 IYIIDDHVAASPSGLLADARILIDYARDVALSHRFLYDEPI 108
>gi|116196418|ref|XP_001224021.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88180720|gb|EAQ88188.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 245
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 20/107 (18%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y G ++G E VTS LL+TS
Sbjct: 3 MARSEYDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSTLLETS 62
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
S EK+ +ID H+ CA++G+ +DA ++ ARV+ + +A+ Y E ++
Sbjct: 63 -SVEKIVEIDRHIGCAMSGLQADARSMVEHARVECQSHAFNYNEQLR 108
>gi|296817937|ref|XP_002849305.1| proteasome component PUP2 [Arthroderma otae CBS 113480]
gi|238839758|gb|EEQ29420.1| proteasome component PUP2 [Arthroderma otae CBS 113480]
Length = 251
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 25/108 (23%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------------GCLVG-ENNVTSKLLQT 40
YDR FSPEGRL+QV+Y G ++G E VTS LL+T
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGFVITIKVATSEGVVLGVEKRVTSTLLET 67
Query: 41 STSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
S S EK+ +ID H+ CA++G+ +DA ++ ARV+ + + + Y EP++
Sbjct: 68 S-SVEKIVEIDQHIGCAMSGLQADARSMVEHARVETQNHRFHYSEPLR 114
>gi|168024139|ref|XP_001764594.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684172|gb|EDQ70576.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 237
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 22/119 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ TS EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGLKTKEGVVLAVEKRITSVLLE-PTSVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
+ +ID+H+ CA++G+ +DA L+ RV+ + + ++Y EP+ + T Q LAL+
Sbjct: 67 IMEIDEHIGCAMSGLTADARTLVEHGRVETQNHRFSYNEPM---SVESTTQALCDLALR 122
>gi|301103320|ref|XP_002900746.1| proteasome subunit alpha type-5, putative [Phytophthora infestans
T30-4]
gi|262101501|gb|EEY59553.1| proteasome subunit alpha type-5, putative [Phytophthora infestans
T30-4]
Length = 244
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 58/102 (56%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y MG L E +TS LL+ S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKMGTTAIGIRTKEGVVLAVEKRLTSPLLEPG-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ ++D HV A++GI +DA LI+ ARV+A + ++Y EP++
Sbjct: 67 IMEVDKHVGAAMSGITADAQTLIDHARVEATNHWFSYNEPVR 108
>gi|41615303|ref|NP_963801.1| proteasome subunit alpha [Nanoarchaeum equitans Kin4-M]
gi|40069027|gb|AAR39362.1| NEQ521 [Nanoarchaeum equitans Kin4-M]
Length = 250
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGCL-------VGENNVTSKLLQTSTSAEK 46
YDR +T+FSP+GRL QV+Y +G L +G+ + K + S S EK
Sbjct: 12 YDRASTLFSPDGRLLQVEYARTTVKQSPTAIGMLYKTGVLVIGDKKIVEKFVIPS-SIEK 70
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+Y +DDHV A AGI+ D +LI ARV A+ Y Y Y PI
Sbjct: 71 VYIVDDHVIAAPAGIIGDGRVLIERARVIAQTYKYFYGHPI 111
>gi|379003156|ref|YP_005258828.1| proteasome endopeptidase complex subunit alpha [Pyrobaculum
oguniense TE7]
gi|375158609|gb|AFA38221.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Pyrobaculum oguniense TE7]
Length = 243
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYMG------------------CLVGENNVTSKLLQTSTSAEK 46
YDR T+FSPEG++YQV+Y G L E S L +S S EK
Sbjct: 9 YDRAITIFSPEGKIYQVEYAGEAVKRGWPTVGVKCRSGVALAAEKRKISALFDSS-SLEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+Y IDDHVA + +G+++DA ILI+ AR A + + Y EPI
Sbjct: 68 IYIIDDHVAASPSGLLADARILIDYARDIALSHRFLYDEPI 108
>gi|302847835|ref|XP_002955451.1| 20S proteasome alpha subunit D [Volvox carteri f. nagariensis]
gi|300259293|gb|EFJ43522.1| 20S proteasome alpha subunit D [Volvox carteri f. nagariensis]
Length = 252
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 18/108 (16%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM------GCL-----------VGENNVTSKLLQTSTS 43
MS RYDR TVFSP+G L+QV+Y G L +G +++ LQ + +
Sbjct: 1 MSARYDRAITVFSPDGHLFQVEYALEAVRKGALAVGVKGQDTVVLGVEKISTAKLQDART 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ-DY 90
K+ KIDDH+ A AG+ +DA +L N ARV+A+ Y E + DY
Sbjct: 61 VRKIIKIDDHICLAFAGLTADARVLANRARVEAQSYRLTLDEKVTVDY 108
>gi|393246868|gb|EJD54376.1| 20S proteasome subunit [Auricularia delicata TFB-10046 SS5]
Length = 242
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------------MGCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E V S LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTTVGISTPHGVVLGVEKRVQSPLLEAS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA +I+ ARV ++ +A+ Y E I+
Sbjct: 67 IVEIDKHLGCAMSGLTADARTMIDHARVTSQNHAFTYDEKIK 108
>gi|119481163|ref|XP_001260610.1| proteasome component Pup2, putative [Neosartorya fischeri NRRL 181]
gi|119408764|gb|EAW18713.1| proteasome component Pup2, putative [Neosartorya fischeri NRRL 181]
Length = 252
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 70/131 (53%), Gaps = 22/131 (16%)
Query: 12 FSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEKMYKIDDH 53
FSPEGRL+QV+Y G ++G E VTS LL+ S S EK+ +ID H
Sbjct: 21 FSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSTLLEAS-SVEKIVEIDQH 79
Query: 54 VACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKVLRKTMDS 113
+ CA++G+ +DA L+ ARV+ + +A+ Y EP+ + + T Q LAL+ D
Sbjct: 80 IGCAMSGLQADARSLVEHARVECQNHAFHYAEPL---RVESTTQAICDLALRFGETGDDD 136
Query: 114 TSLTSEKLELA 124
S+ S +A
Sbjct: 137 ESVMSRPFGVA 147
>gi|448733558|ref|ZP_21715801.1| proteasome subunit alpha [Halococcus salifodinae DSM 8989]
gi|445802447|gb|EMA52752.1| proteasome subunit alpha [Halococcus salifodinae DSM 8989]
Length = 245
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 58/101 (57%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR TT+FSP+GRLYQV+Y +G LV E V S L++ S S EK
Sbjct: 10 YDRGTTIFSPDGRLYQVEYAREAVERGSTSLGVRTEDGVALVAEQRVRSPLMEQS-SIEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K+DDHVA AG ++DA L + AR QA+ Y EPI
Sbjct: 69 LHKVDDHVAVGSAGHVADARQLTDFARQQAQVDRLRYGEPI 109
>gi|156379569|ref|XP_001631529.1| predicted protein [Nematostella vectensis]
gi|156218571|gb|EDO39466.1| predicted protein [Nematostella vectensis]
Length = 242
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G +V E +TS L+++S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVVVAVEKRITSPLMESS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID H+ CA++G+++D+ +I+ ARV+A+ + + Y E +
Sbjct: 67 IVEIDSHIGCAMSGLIADSRTMIDKARVEAQNHWFTYNESM 107
>gi|392573949|gb|EIW67087.1| hypothetical protein TREMEDRAFT_45506 [Tremella mesenterica DSM
1558]
Length = 289
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 36/123 (29%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYMG------------------CLVGENNVTSKLLQTS- 41
M+RRYD +TT+FSPEGRLYQV+Y + E VT KLL S
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTVLAVLSKEGIAIAAEKKVTGKLLDLSL 60
Query: 42 -----------------TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQ 84
EK++ +++++ +AGI SDAN L+N AR +A++Y ++Y
Sbjct: 61 APGGEGMGGEGAEAWMGGGGEKIFLLNNNILAGLAGITSDANSLVNFARNRAQQYLFSYN 120
Query: 85 EPI 87
E I
Sbjct: 121 EDI 123
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLP-SGKVKYRICSPESLTM 146
QDYKDD++ ++A L LK + KTMDS L+SEKLE A + L P +G+ +I P L
Sbjct: 195 QDYKDDLSLEDAKSLCLKTMSKTMDSIKLSSEKLEFATMTLHPETGQPLAKIYRPSELDE 254
Query: 147 LL 148
LL
Sbjct: 255 LL 256
>gi|349804897|gb|AEQ17921.1| hypothetical protein [Hymenochirus curtipes]
Length = 212
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 97/209 (46%), Gaps = 61/209 (29%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTST 42
MSRRYD +TT+FSP+ R YQV+Y +G L E KLL
Sbjct: 5 MSRRYDSRTTIFSPKARFYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVF 64
Query: 43 SAEKMYKIDDHVACAVAG---IMSDANILINTARVQARR------------YAYAYQ--- 84
+EK+YK++D +AC+VAG + + +I + +R Y +Q
Sbjct: 65 FSEKIYKLNDDMACSVAGEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQ 124
Query: 85 -EPI----------------------QDYKD-DMTRQEAVQLALKVLRKTMDSTSLTSEK 120
+P QDYK+ +MT Q A+ LA+KVL KTMD + L++EK
Sbjct: 125 SDPSGNYGGWKATCINNSAAAVSMLKQDYKEGEMTLQGALALAVKVLNKTMDVSKLSAEK 184
Query: 121 LELAEVFLLPSGKVKYRICSPESLTMLLE 149
+E+A +GK K R+ + + L++
Sbjct: 185 VEIA-TLTRENGKTKIRVLKQKEVEELIK 212
>gi|146302859|ref|YP_001190175.1| proteasome subunit alpha [Metallosphaera sedula DSM 5348]
gi|172046887|sp|A4YCU9.1|PSA_METS5 RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|145701109|gb|ABP94251.1| Proteasome endopeptidase complex [Metallosphaera sedula DSM 5348]
Length = 240
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 58/105 (55%), Gaps = 20/105 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+G LYQVDY +G ++GE S+LL S EK
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTTLGVKTKNAVVILGEKKKASQLLDVD-SIEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ-DY 90
++ +DDHV C+ AG+ SD ILI+ AR + ++ Y EPI DY
Sbjct: 69 VFLLDDHVGCSFAGLASDGRILIDYARNSSLQHRLVYDEPISIDY 113
>gi|393218008|gb|EJD03496.1| 20S proteasome subunit [Fomitiporia mediterranea MF3/22]
Length = 242
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 20/137 (14%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------------MGCLVGENNVTSKLLQTSTSAEKM 47
YDR FSPEGRL+QV+Y G ++G L S+S EK+
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTTVGVRTPHGVVLGVEKRVQSSLLESSSIEKI 67
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKVL 107
+ID HV CA++G+++DA +I+ ARV A+ +A+ Y EPI K + Q LAL+
Sbjct: 68 VEIDSHVGCAMSGLVADARTMIDHARVTAQNHAFTYDEPI---KVESVTQAVCDLALRFG 124
Query: 108 RKTMDSTSLTSEKLELA 124
D ++ S +A
Sbjct: 125 ESIHDEEAMMSRPFGVA 141
>gi|321260178|ref|XP_003194809.1| proteasome subunit alpha type 4 [Cryptococcus gattii WM276]
gi|317461281|gb|ADV23022.1| proteasome subunit alpha type 4, putative [Cryptococcus gattii
WM276]
Length = 285
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 63/122 (51%), Gaps = 35/122 (28%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-------------MGC-----LVGENNVTSKLLQTS- 41
M+RRYD +TT+FSPEGRLYQV+Y + C + E VT KLL S
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTVLAVLCKEGIAMAAEKKVTGKLLDLSL 60
Query: 42 ----------------TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
EK++ +++++ +AGI SDAN L+N AR A+R+ ++Y E
Sbjct: 61 TPGAGVGGEGTEAWMGGGGEKIFLLNNNILAGLAGITSDANSLVNFARNSAQRHLFSYDE 120
Query: 86 PI 87
I
Sbjct: 121 DI 122
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 33/46 (71%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGK 133
QDY +D++ ++A L LKV+ KTMDST L+SEKLE A + L P K
Sbjct: 194 QDYNEDLSLEDAKSLCLKVMSKTMDSTKLSSEKLEFATMTLHPETK 239
>gi|402079809|gb|EJT75074.1| hypothetical protein GGTG_08912 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 254
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 55/91 (60%), Gaps = 18/91 (19%)
Query: 15 EGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTSAEKMYKIDDHVAC 56
+GRLYQV+Y G +G E VTSKLL+ TSAEK+Y ++D++ C
Sbjct: 18 QGRLYQVEYALEAISHAGTAIGILAKDGIVLAAERKVTSKLLEQDTSAEKLYILNDNMIC 77
Query: 57 AVAGIMSDANILINTARVQARRYAYAYQEPI 87
AVAG+ +DANILIN AR A+RY Y E I
Sbjct: 78 AVAGMTADANILINYARQAAQRYLLTYNEDI 108
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYK+D + EA +A+KVL KTMDST L+SEK+E A V GK+ +R+ S + +T L
Sbjct: 180 QDYKEDCSLTEACGVAVKVLSKTMDSTKLSSEKIEFATVGQTQDGKIYHRLWSADEITAL 239
Query: 148 LENFGVAQPAS 158
L+ +A+ S
Sbjct: 240 LKEHDLAKDES 250
>gi|330835841|ref|YP_004410569.1| proteasome subunit alpha [Metallosphaera cuprina Ar-4]
gi|329567980|gb|AEB96085.1| proteasome subunit alpha [Metallosphaera cuprina Ar-4]
Length = 240
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 58/105 (55%), Gaps = 20/105 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+G LYQVDY +G ++GE S+LL S EK
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTTLGVKTRNAVVILGEKKKASQLLDVD-SIEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ-DY 90
++ +DDHV C+ AG+ SD ILI+ AR + ++ Y EPI DY
Sbjct: 69 VFLLDDHVGCSFAGLASDGRILIDYARNSSLQHRLVYDEPISIDY 113
>gi|443689760|gb|ELT92077.1| hypothetical protein CAPTEDRAFT_162763 [Capitella teleta]
Length = 241
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 19/102 (18%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MGC------------LVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G L E VTS L++ S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGIILAVEKRVTSSLIEPS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
K+ ++D H+ CA++G+++D+ LI+ ARV+A+ + + Y E I
Sbjct: 66 KIMEVDSHIGCAMSGLIADSRTLIDKARVEAQNHWFTYDEKI 107
>gi|402082825|gb|EJT77843.1| proteasome component PUP2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 245
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 20/107 (18%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y G ++G E VTS LL+TS
Sbjct: 3 MARSEYDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVVLGVEKRVTSTLLETS 62
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
S EK+ +ID H+ CA++G+ +DA ++ ARV+ + +A+ Y E ++
Sbjct: 63 -SVEKIVEIDRHIGCAMSGLQADARSMVEHARVECQSHAFNYNENLR 108
>gi|348686647|gb|EGZ26462.1| hypothetical protein PHYSODRAFT_354158 [Phytophthora sojae]
Length = 244
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 58/102 (56%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y MG L E +TS LL+ S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKMGTTAIGIRTKEGVVLAVEKRLTSPLLEPG-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ ++D HV A++GI +DA LI+ ARV+A + ++Y EP++
Sbjct: 67 IMEVDRHVGAAMSGITADAQTLIDHARVEATNHWFSYNEPVR 108
>gi|398390924|ref|XP_003848922.1| proteasome core particle subunit alpha 5 [Zymoseptoria tritici
IPO323]
gi|339468798|gb|EGP83898.1| hypothetical protein MYCGRDRAFT_76460 [Zymoseptoria tritici IPO323]
Length = 245
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------------MGCLVG-ENNVTSKLLQTSTSAEK 46
YDR + FSPEGRL+QV+Y G ++G E +TS LL+TS S EK
Sbjct: 8 YDRGISTFSPEGRLFQVEYSLEAIKLGSTAIGISTSAGVILGVEKRITSSLLETS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ +ID HV CA++G+ +DA +I ARV ++ + + Y E
Sbjct: 67 IVEIDRHVGCAMSGLQADARSMIEHARVTSQSHEFHYNE 105
>gi|16943777|emb|CAD10778.1| 20S proteasome subunit alpha V [Physcomitrella patens]
Length = 237
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 22/119 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ TS EK
Sbjct: 8 YDRGFNTFSPEGRLFQVEYAIEAIKLGSTAVGLKTKEGVVLAVEKRITSVLLE-PTSVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
+ +ID+H+ CA++G+ +DA L+ RV+ + + ++Y EP+ + T Q LAL+
Sbjct: 67 IMEIDEHIGCAMSGLTADARTLVEHGRVETQNHRFSYNEPM---SVESTTQALCDLALR 122
>gi|256076798|ref|XP_002574696.1| subfamily T1A non-peptidase homologue (T01 family) [Schistosoma
mansoni]
gi|353230533|emb|CCD76950.1| subfamily T1A non-peptidase homologue (T01 family) [Schistosoma
mansoni]
Length = 237
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 70/122 (57%), Gaps = 13/122 (10%)
Query: 5 YDRQTTVFSPEGRLYQVDYM--------GCLVG-ENNVTSKLLQTSTSAEKMYKIDDHVA 55
YDR FSPEGRL+QV+Y G ++ E V S L+ S S EK++++D H+A
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEATKTSEGVVMAVEKRVNSTLIIPS-SIEKIFEVDKHIA 66
Query: 56 CAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKVLRKTMDSTS 115
CAV+G+++DA LI AR +A + + Y E + +D+T+ LAL M+S +
Sbjct: 67 CAVSGLVADARTLIERARTEAAHHWFVYNEKMT--IEDVTKA-VSNLALAFGDDDMESGA 123
Query: 116 LT 117
++
Sbjct: 124 MS 125
>gi|318098723|ref|NP_001187839.1| proteasome subunit alpha type-5 [Ictalurus punctatus]
gi|308324110|gb|ADO29190.1| proteasome subunit alpha type-5 [Ictalurus punctatus]
Length = 241
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G CL E +TS L++ + S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPN-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ AR++ + + + Y E
Sbjct: 66 KIVEIDTHIGCAMSGLIADAKTLIDKARLETQNHWFTYNE 105
>gi|209875677|ref|XP_002139281.1| proteasome subunit alpha type 5 [Cryptosporidium muris RN66]
gi|209554887|gb|EEA04932.1| proteasome subunit alpha type 5, putative [Cryptosporidium muris
RN66]
Length = 255
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAMAAMKLGSTAVGIKTEEGVVLASERRITSTLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ ID HV C ++G+++DA +I+ ARV+A+ Y + Y E
Sbjct: 67 IMDIDTHVGCCMSGLVADAKTMIDHARVEAQNYFFTYDE 105
>gi|378732712|gb|EHY59171.1| proteasome component PUP2 [Exophiala dermatitidis NIH/UT8656]
Length = 246
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 59/101 (58%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------------MGCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G L+G E VTS LL S+S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSHGVLLGVEKRVTSPLL-VSSSIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID H+ CA++G+ +DA +I AR++++ +A+ + E +
Sbjct: 67 IVEIDRHIGCAMSGLQADARSMIEHARIESQNHAFNFNEKL 107
>gi|388583463|gb|EIM23765.1| 20S proteasome subunit [Wallemia sebi CBS 633.66]
Length = 256
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------------MGCLVGENNVTSKLLQTSTSAEKM 47
YDR + FSPEGRLYQV+Y G ++G + L STS EK+
Sbjct: 8 YDRGVSTFSPEGRLYQVEYAIEAIKLGSTAVGIATKHGVVLGVEKRSQSPLLLSTSIEKI 67
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
ID H+ CA++G+ +DA +++ ARV + + ++Y EP+
Sbjct: 68 LSIDSHLGCAMSGLTADARTMVDHARVVGQNHRFSYDEPL 107
>gi|29726321|pdb|1J2Q|A Chain A, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726322|pdb|1J2Q|B Chain B, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726323|pdb|1J2Q|C Chain C, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726324|pdb|1J2Q|D Chain D, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726325|pdb|1J2Q|E Chain E, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726326|pdb|1J2Q|F Chain F, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726327|pdb|1J2Q|G Chain G, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
Length = 237
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 59/99 (59%), Gaps = 19/99 (19%)
Query: 7 RQTTVFSPEGRLYQVDY-------------MGC-----LVGENNVTSKLLQTSTSAEKMY 48
R TVFSP+GRL+QV+Y + C L+ + V SKLL+ T EK+Y
Sbjct: 1 RAITVFSPDGRLFQVEYAREAVKRGATAIGIKCKEGVILIADKRVGSKLLEADT-IEKIY 59
Query: 49 KIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
KID+H+ A +G+++DA +LI+ AR++A+ Y EPI
Sbjct: 60 KIDEHICAATSGLVADARVLIDRARIEAQINRLTYDEPI 98
>gi|409096216|ref|ZP_11216240.1| proteasome subunit alpha [Thermococcus zilligii AN1]
Length = 260
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 62/101 (61%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTSAEK 46
YDR + VFSP+GRL+QV+Y VG E +TS+L++ S S EK
Sbjct: 10 YDRASAVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSRLIEPS-SYEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++++DD +A A +GI++DA +L++ AR++A+ Y Y EP+
Sbjct: 69 IFQVDDRIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPV 109
>gi|353236410|emb|CCA68405.1| probable PUP2-20S proteasome subunit (alpha5) [Piriformospora
indica DSM 11827]
Length = 251
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 59/101 (58%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E V S LL++S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTTVGIRTPDGVILGVEKRVPSPLLESS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID H+ CA++G+ +DA +I+ ARV ++ +++ Y E I
Sbjct: 67 IMEIDAHIGCAMSGLTADARTMIDHARVTSQNHSFTYDEKI 107
>gi|198432945|ref|XP_002127299.1| PREDICTED: similar to 20S proteasome alpha5 subunit [Ciona
intestinalis]
Length = 273
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 62/104 (59%), Gaps = 20/104 (19%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y +G L E +TS L++ S
Sbjct: 34 MTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTADGVVLAVEKRITSPLIEAS 93
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
S EK+++ID HV CA++G+++D+ +I+ ARV+A+ + + + E
Sbjct: 94 -SIEKVFEIDTHVGCAMSGLIADSKTMIDRARVEAQNHWFTFDE 136
>gi|383319308|ref|YP_005380149.1| proteasome endopeptidase complex subunit alpha [Methanocella
conradii HZ254]
gi|379320678|gb|AFC99630.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Methanocella conradii HZ254]
Length = 256
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 59/101 (58%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV Y MG L+ + +++KLL+ + S EK
Sbjct: 11 YDRAITVFSPDGRLFQVHYAQEAVRRGATVMGLKSKDGIALIVDKRISTKLLE-AESIEK 69
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++KIDDH+ +G+++D L++ ARV+A+ Y EPI
Sbjct: 70 IFKIDDHIGAVASGLVADGRALVDRARVEAQINHITYGEPI 110
>gi|397779934|ref|YP_006544407.1| proteasome alpha subunit [Methanoculleus bourgensis MS2]
gi|396938436|emb|CCJ35691.1| proteasome alpha subunit [Methanoculleus bourgensis MS2]
Length = 240
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGC-----LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRLYQV+Y + C L+ + VTS+LL+ S EK
Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGLKCSEGVVLIVDKRVTSRLLE-PVSIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++KID H+ A +G++ DA L++ ARV+++ +Y EPI
Sbjct: 68 IFKIDTHIGVASSGLVGDARALVDRARVESQINRVSYNEPI 108
>gi|428166064|gb|EKX35047.1| proteasome subunit alpha type 5 [Guillardia theta CCMP2712]
Length = 239
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E VTS LL TS EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRVTSPLLD-PTSIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ ++D H+ CA++G+ +DA L++ ARV+ + + + Y EP+
Sbjct: 67 IMELDSHIGCAMSGLTADARTLVDKARVETQNHRFTYDEPM 107
>gi|119872356|ref|YP_930363.1| proteasome subunit alpha [Pyrobaculum islandicum DSM 4184]
gi|119673764|gb|ABL88020.1| Proteasome endopeptidase complex [Pyrobaculum islandicum DSM 4184]
Length = 251
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYMG------------------CLVGENNVTSKLLQTSTSAEK 46
YDR T+FSPEG++YQV+Y G LV E S L S S EK
Sbjct: 19 YDRAITIFSPEGKIYQVEYAGEAVKRGWPTVGVKCRGGVVLVAEKRKISALFDPS-SLEK 77
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+Y ID+HVA + +G+++DA ILI+ AR A + + Y EPI
Sbjct: 78 IYLIDEHVAASPSGLLADARILIDYARDVALSHRFIYDEPI 118
>gi|448729603|ref|ZP_21711918.1| proteasome subunit alpha [Halococcus saccharolyticus DSM 5350]
gi|445794905|gb|EMA45443.1| proteasome subunit alpha [Halococcus saccharolyticus DSM 5350]
Length = 245
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 58/101 (57%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR TT+FSP+GRLYQV+Y +G LV E V S L++ S S EK
Sbjct: 10 YDRGTTIFSPDGRLYQVEYAREAVERGSPSLGVRTEDGVVLVAEQRVRSPLMEQS-SIEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K+DDH+A AG ++DA L + AR QA+ Y EPI
Sbjct: 69 LHKVDDHIAVGSAGHVADARQLTDFARQQAQVDRLRYGEPI 109
>gi|327310393|ref|YP_004337290.1| proteasome subunit alpha [Thermoproteus uzoniensis 768-20]
gi|326946872|gb|AEA11978.1| proteasome subunit alpha [Thermoproteus uzoniensis 768-20]
Length = 239
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYMG------------------CLVGENNVTSKLLQTSTSAEK 46
YDR T+FSPEG+LYQV+Y G L E S+L S S EK
Sbjct: 9 YDRAITIFSPEGKLYQVEYAGEAVKRGWPTVGVKCSSGVVLAAEKRKISQLFDPS-SLEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+Y +DDHVA + +G+++DA +L++ AR A + + Y EPI
Sbjct: 68 IYIVDDHVAISPSGLLADARVLVDYARSVALAHRFLYDEPI 108
>gi|72006085|ref|XP_782337.1| PREDICTED: proteasome subunit alpha type-5-like [Strongylocentrotus
purpuratus]
Length = 241
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 59/99 (59%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E VTS L++ +TS EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIRTNEGIVLAVEKRVTSPLME-ATSIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ +ID H+ CA++G+++D+ +I+ ARV+A+ + + Y E
Sbjct: 67 IVEIDSHIGCAMSGLIADSRTMIDRARVEAQSHWFTYNE 105
>gi|384498744|gb|EIE89235.1| proteasome component PUP2 [Rhizopus delemar RA 99-880]
Length = 352
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 22/119 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E V+S LL+ S S EK
Sbjct: 118 YDRGVNTFSPEGRLFQVEYAIEAIKLGTTAIGVQTSEGVVLAVEKRVSSTLLEPS-SIEK 176
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
+ +ID+H+ CAV+G+ +DA +I ARV A+ + + Y+E + K + Q LAL+
Sbjct: 177 IMEIDEHLGCAVSGMTADARTMIEHARVAAQNHRFTYEEKL---KVESVTQSVCDLALR 232
>gi|332796512|ref|YP_004458012.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
gi|332694247|gb|AEE93714.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
Length = 235
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+G LYQVDY +G ++GE S+LL S EK
Sbjct: 3 YDRAITIFSPDGSLYQVDYAFEAVKKGWTTLGIKTKSAVVVLGEKKKASQLLDLD-SIEK 61
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++ +DDHV C+ AG+ SD +LI+ AR A ++ Y EPI
Sbjct: 62 VFLLDDHVGCSFAGLASDGRVLIDYARNSALQHRLIYDEPI 102
>gi|397622487|gb|EJK66699.1| hypothetical protein THAOC_12355 [Thalassiosira oceanica]
Length = 326
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLQTKHGSVLAVEKRLTSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID HV A++G+++DA L++ ARV+A+ + + Y EPI
Sbjct: 67 IAEIDSHVGAAMSGLVADARTLVDHARVEAQNHRFTYDEPI 107
>gi|70606428|ref|YP_255298.1| proteasome subunit alpha [Sulfolobus acidocaldarius DSM 639]
gi|449066640|ref|YP_007433722.1| proteasome subunit alpha [Sulfolobus acidocaldarius N8]
gi|449068914|ref|YP_007435995.1| proteasome subunit alpha [Sulfolobus acidocaldarius Ron12/I]
gi|76363302|sp|Q4JB24.1|PSA_SULAC RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|68567076|gb|AAY80005.1| proteasome alpha subunit [Sulfolobus acidocaldarius DSM 639]
gi|449035148|gb|AGE70574.1| proteasome subunit alpha [Sulfolobus acidocaldarius N8]
gi|449037422|gb|AGE72847.1| proteasome subunit alpha [Sulfolobus acidocaldarius Ron12/I]
Length = 242
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+G LYQVDY +G L+ E ++LL EK
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKRGWTTLGVKTKSGVVLLAEKRKATQLLDVD-GIEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++ +DDHV C AG+ SD ILI+ AR QA ++ Y EPI
Sbjct: 69 IFMLDDHVGCTFAGLASDGRILIDYARSQALQHRLIYDEPI 109
>gi|409052240|gb|EKM61716.1| hypothetical protein PHACADRAFT_248487 [Phanerochaete carnosa
HHB-10118-sp]
Length = 242
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 75/146 (51%), Gaps = 25/146 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E V S LL S+S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTTVGVCTKEGVVLAVEKRVQSPLL-VSSSIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID H+ CA++G+++DA +++ ARV ++ +A+ Y E I K + Q LAL+
Sbjct: 67 IMEIDRHLGCAMSGLIADARTMVDHARVTSQNHAFVYDERI---KVESATQAVCDLALRF 123
Query: 107 LRKTMDSTSLTSEKLELAEVFLLPSG 132
D ++ S +A LL +G
Sbjct: 124 GESVHDEEAMMSRPFGVA---LLIAG 146
>gi|357625487|gb|EHJ75913.1| proteasome zeta subunit [Danaus plexippus]
Length = 269
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS L++ T+ EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIGTSEGVVLAVEKRITSPLME-PTTIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ ++D HVACAV+G+M+D+ LI ARV+ + + + Y E
Sbjct: 67 IVEVDRHVACAVSGLMADSRTLIERARVECQNHWFVYNE 105
>gi|340521670|gb|EGR51904.1| non-peptidase proeosome, subunit alpha 5 [Trichoderma reesei
QM6a]
Length = 237
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 6 DRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEKM 47
DR FSPEGRL+QV+Y G ++G E VTS LL+TS S EK+
Sbjct: 1 DRGINTFSPEGRLFQVEYSLEAIKLGSTAIGIATSEGVILGVEKRVTSSLLETS-SVEKI 59
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ID H+ CA++G+ +DA +I ARV+ + +A+ Y E +
Sbjct: 60 VEIDRHIGCAMSGLQADARSMIEHARVECQSHAFNYNESL 99
>gi|147919678|ref|YP_686578.1| proteasome subunit alpha [Methanocella arvoryzae MRE50]
gi|110621974|emb|CAJ37252.1| 20S proteasome, alpha subunit [Methanocella arvoryzae MRE50]
Length = 254
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 59/101 (58%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV Y MG L+ + +++KLL+ + S EK
Sbjct: 8 YDRAITVFSPDGRLFQVHYAQEAVRRGATVMGLKSKDGIALLVDKRISTKLLE-AESIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++KIDDH+ +G+++D L++ ARV+A+ Y EPI
Sbjct: 67 IFKIDDHIGAVASGLVADGRALVDRARVEAQINHITYDEPI 107
>gi|282165300|ref|YP_003357685.1| proteasome alpha subunit [Methanocella paludicola SANAE]
gi|282157614|dbj|BAI62702.1| proteasome alpha subunit [Methanocella paludicola SANAE]
Length = 256
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV Y MG ++ + +++KLL+ + S EK
Sbjct: 11 YDRAITVFSPDGRLFQVHYAQEAVRRGATVMGLKSKDGIAMIVDKRISTKLLE-AESIEK 69
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++KIDDH+ +G+++D L++ ARV+A+ Y EPI
Sbjct: 70 IFKIDDHIGAVASGLVADGRALVDKARVEAQVNHITYGEPI 110
>gi|171185842|ref|YP_001794761.1| proteasome subunit alpha [Pyrobaculum neutrophilum V24Sta]
gi|170935054|gb|ACB40315.1| Proteasome endopeptidase complex [Pyrobaculum neutrophilum V24Sta]
Length = 241
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYMG------------------CLVGENNVTSKLLQTSTSAEK 46
YDR T+FSPEG++YQV+Y G LV E S L S S EK
Sbjct: 9 YDRAITIFSPEGKIYQVEYAGEAVKRGWPTVGVKCRSGVVLVAEKRKISALFDPS-SLEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+Y +D+HVA + +G+++DA ILI+ AR A + + Y EPI
Sbjct: 68 IYLVDEHVAASPSGLLADARILIDYARDVALSHRFIYDEPI 108
>gi|169597561|ref|XP_001792204.1| hypothetical protein SNOG_01567 [Phaeosphaeria nodorum SN15]
gi|160707546|gb|EAT91216.2| hypothetical protein SNOG_01567 [Phaeosphaeria nodorum SN15]
Length = 256
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 60/98 (61%), Gaps = 19/98 (19%)
Query: 9 TTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEKMYKI 50
+ FSPEGRL+QV+Y G ++G E VTS LL+TS S EK+ +I
Sbjct: 23 NSTFSPEGRLFQVEYSLEAIKLGSTAIGVATGEGVILGVEKRVTSTLLETS-SVEKIVEI 81
Query: 51 DDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
D H+ CA++G+ +DA ++ ARV+++ +A+ Y EP++
Sbjct: 82 DRHIGCAMSGLQADARSMVEHARVESQNHAFNYNEPLR 119
>gi|118354007|ref|XP_001010268.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|89292035|gb|EAR90023.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 248
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 18/101 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGCLVGENNV-------TSKLLQTST 42
MSRRYD++TT F+ +G+L QV Y +G L E V S LL+ T
Sbjct: 1 MSRRYDQKTTTFTNDGKLLQVQYAIEAINKTGSAIGILTKEGIVLTTERQDVSSLLEAPT 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAY 83
+EK++++D H+ V G+ +DAN LI+ ARV+A+ Y Y Y
Sbjct: 61 HSEKIFQLDSHLYSVVNGLTADANYLIDIARVEAQNYKYHY 101
>gi|384485479|gb|EIE77659.1| hypothetical protein RO3G_02363 [Rhizopus delemar RA 99-880]
Length = 242
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 22/119 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E V+S LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGTTAIGVQTSEGVVLAVEKRVSSTLLEPS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
+ +ID+H+ CAV+G+ +DA +I ARV A+ + + Y+E + K + Q LAL+
Sbjct: 67 IMEIDEHLGCAVSGMTADARTMIEHARVAAQNHRFTYEERL---KVESVTQSVCDLALR 122
>gi|71023807|ref|XP_762133.1| hypothetical protein UM05986.1 [Ustilago maydis 521]
gi|46101725|gb|EAK86958.1| hypothetical protein UM05986.1 [Ustilago maydis 521]
Length = 250
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 71/138 (51%), Gaps = 22/138 (15%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E V SKLL++S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYALEAIKLGSATVGIATKEGVVLGVEKRVQSKLLESS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ ++D H+ A++G+ +DA +I ARV ++ +A+ Y E I K + Q LAL+
Sbjct: 67 IMEVDQHLGAAMSGLTADARTMIEHARVTSQNHAFTYDEEI---KVESVTQAVCDLALRF 123
Query: 107 LRKTMDSTSLTSEKLELA 124
T ++ S +A
Sbjct: 124 GESTAGDEAMMSRPFGVA 141
>gi|388857251|emb|CCF49093.1| probable PUP2-20S proteasome subunit (alpha5) [Ustilago hordei]
Length = 250
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 71/138 (51%), Gaps = 22/138 (15%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E V SKLL++S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYALEAIKLGSATVGIATKEGVVLGVEKRVQSKLLESS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ ++D H+ A++G+ +DA +I ARV ++ +A+ Y E I K + Q LAL+
Sbjct: 67 IMEVDQHLGAAMSGLTADARTMIEHARVTSQNHAFTYDEEI---KVESVTQAVCDLALRF 123
Query: 107 LRKTMDSTSLTSEKLELA 124
T ++ S +A
Sbjct: 124 GESTAGDEAMMSRPFGVA 141
>gi|148642305|ref|YP_001272818.1| proteasome subunit alpha [Methanobrevibacter smithii ATCC 35061]
gi|222444524|ref|ZP_03607039.1| hypothetical protein METSMIALI_00136 [Methanobrevibacter smithii
DSM 2375]
gi|261350937|ref|ZP_05976354.1| proteasome subunit alpha [Methanobrevibacter smithii DSM 2374]
gi|166199288|sp|A5UJS2.1|PSA_METS3 RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|148551322|gb|ABQ86450.1| proteasome, alpha subunit, PsmA [Methanobrevibacter smithii ATCC
35061]
gi|222434089|gb|EEE41254.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Methanobrevibacter smithii DSM 2375]
gi|288860275|gb|EFC92573.1| proteasome subunit alpha [Methanobrevibacter smithii DSM 2374]
Length = 250
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 17/101 (16%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR TVFSP+GRL+QV+Y G ++ + T+ L +TS EK+
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTSIGIKCSEGIVLAVDKRTTSNLVEATSIEKI 68
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+KID+H+ A +G+++DA L+ ARV+A+ Y EPI+
Sbjct: 69 FKIDEHIGAATSGLVADARALVERARVEAQINKITYSEPIR 109
>gi|321457997|gb|EFX69073.1| hypothetical protein DAPPUDRAFT_231717 [Daphnia pulex]
Length = 242
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 58/100 (58%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G L E +TS L++ T+ E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRITSPLME-PTTIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CAV+G+M+D+ +++ ARV+A+ + + Y E
Sbjct: 66 KIVEIDKHIGCAVSGLMADSRTMVDRARVEAQNHWFTYDE 105
>gi|225679898|gb|EEH18182.1| proteasome subunit alpha type-5 [Paracoccidioides brasiliensis
Pb03]
Length = 272
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 60/97 (61%), Gaps = 19/97 (19%)
Query: 10 TVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEKMYKID 51
+ FSPEGRL+QV+Y G ++G E VTS LL+TS S EK+ +ID
Sbjct: 40 STFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVVLGVEKRVTSTLLETS-SVEKIVEID 98
Query: 52 DHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
H+ CA++G+ +DA ++ ARV+++ +A+ Y EP++
Sbjct: 99 RHIGCAMSGLQADARSMVEHARVESQNHAFNYSEPLR 135
>gi|452845399|gb|EME47332.1| hypothetical protein DOTSEDRAFT_166290 [Dothistroma septosporum
NZE10]
Length = 245
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------------MGCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E +TS LL+TS S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGISTSAGVILGVEKRITSSLLETS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ +ID H+ CA++G+ +DA +I ARV ++ + + Y E
Sbjct: 67 IVEIDRHIGCAMSGLQADARSMIEHARVTSQSHEFHYNE 105
>gi|452986785|gb|EME86541.1| hypothetical protein MYCFIDRAFT_65271 [Pseudocercospora fijiensis
CIRAD86]
Length = 245
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------------MGCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E +TS LL+TS S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGISTSAGVILGVEKRITSSLLETS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ +ID H+ CA++G+ +DA +I ARV ++ + + Y E
Sbjct: 67 IVEIDRHIGCAMSGLQADARSMIEHARVTSQSHEFHYNE 105
>gi|374325956|ref|YP_005084156.1| proteasome subunit alpha [Pyrobaculum sp. 1860]
gi|356641225|gb|AET31904.1| proteasome subunit alpha [Pyrobaculum sp. 1860]
Length = 238
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYMG------------------CLVGENNVTSKLLQTSTSAEK 46
YDR T+FSPEG++YQV+Y G L E S L +S S +K
Sbjct: 4 YDRAITIFSPEGKIYQVEYAGEAVKRGWPTVGVKCKSGVVLAAEKRKISALFDSS-SLDK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+Y IDDHVA + +G+++DA ILI+ AR A + + Y EPI
Sbjct: 63 IYLIDDHVAASPSGLLADARILIDYARDVALSHRFIYDEPI 103
>gi|343427731|emb|CBQ71257.1| probable PUP2-20S proteasome subunit (alpha5) [Sporisorium
reilianum SRZ2]
Length = 250
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 71/138 (51%), Gaps = 22/138 (15%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E V SKLL++S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYALEAIKLGSATVGIATKEGVVLGVEKRVQSKLLESS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ ++D H+ A++G+ +DA +I ARV ++ +A+ Y E I K + Q LAL+
Sbjct: 67 IMEVDQHLGAAMSGLTADARTMIEHARVTSQNHAFTYDEEI---KVESVTQAVCDLALRF 123
Query: 107 LRKTMDSTSLTSEKLELA 124
T ++ S +A
Sbjct: 124 GESTAGDEAMMSRPFGVA 141
>gi|73669981|ref|YP_305996.1| proteasome subunit alpha [Methanosarcina barkeri str. Fusaro]
gi|121723425|sp|Q469M6.1|PSA_METBF RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|72397143|gb|AAZ71416.1| proteasome, subunit-alpha [Methanosarcina barkeri str. Fusaro]
Length = 249
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 63/101 (62%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L+ + +TS+L++ + S EK
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVE-AESIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++IDDH+ A +G+++DA L++ ARV+A+ +Y EPI
Sbjct: 68 IFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPI 108
>gi|402222686|gb|EJU02752.1| 20S proteasome subunit [Dacryopinax sp. DJM-731 SS1]
Length = 242
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 22/119 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------------MGCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E V S LL++S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTTVGIRTPTGVVLGVEKRVQSPLLESS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
+ +ID H+ CA++G+ +DA +I+ ARV ++ +A+ + E I K + Q LAL+
Sbjct: 67 IMEIDTHLGCAMSGLTADARTMIDHARVTSQNHAFTFDERI---KVESVTQAVCDLALR 122
>gi|410214160|gb|JAA04299.1| proteasome (prosome, macropain) subunit, alpha type, 5 [Pan
troglodytes]
Length = 241
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
+DR FSPEGRL QV+Y +G CL E +TS L++ S S E
Sbjct: 7 EHDRGVKTFSPEGRLIQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 66 KIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|307353112|ref|YP_003894163.1| proteasome endopeptidase complex subunit alpha [Methanoplanus
petrolearius DSM 11571]
gi|307156345|gb|ADN35725.1| proteasome endopeptidase complex, alpha subunit [Methanoplanus
petrolearius DSM 11571]
Length = 252
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGC-----LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRLYQV+Y + C L+ + V++KLL+ S S EK
Sbjct: 11 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGVKCSDGVVLIVDKRVSTKLLEQS-SIEK 69
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K+DDH+A A +G++ DA L++ ARV+++ Y E I
Sbjct: 70 IFKVDDHIAVASSGLVGDARALVDRARVESQVNRVTYNESI 110
>gi|52352382|gb|AAU43671.1| proteasome alpha subunit [uncultured archaeon GZfos26D8]
Length = 263
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 61/101 (60%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L+ + +TS+LL+ S EK
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAIGIKAQDGVVLLVDKRLTSRLLEGG-SVEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++KID+H+ A +G+++DA IL++ RV+A+ AY E I
Sbjct: 68 IFKIDEHIGAATSGLVADARILVDRGRVEAQINQIAYGETI 108
>gi|164661487|ref|XP_001731866.1| hypothetical protein MGL_1134 [Malassezia globosa CBS 7966]
gi|159105767|gb|EDP44652.1| hypothetical protein MGL_1134 [Malassezia globosa CBS 7966]
Length = 250
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 22/138 (15%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E V S LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYALEAIKLGSTTVGIVTKEGAVLGVEKRVQSSLLENS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID H+ A++G+ +DA +I+ ARV ++ + + Y E I K + Q LAL+
Sbjct: 67 IMEIDSHLGAAMSGLTADARTMIDHARVTSQNHRFVYDEEI---KVESIAQAVCDLALRF 123
Query: 107 LRKTMDSTSLTSEKLELA 124
T D +L S +A
Sbjct: 124 GENTEDDEALMSRPFGVA 141
>gi|298714366|emb|CBJ27423.1| proteasome subunit alpha [Ectocarpus siliculosus]
Length = 239
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGIQTKEGVVLAVEKRLTSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ ++D H+ A++G+++DA L++ ARV+A+ + + Y EP++
Sbjct: 67 IMEVDSHIGAAMSGLIADARTLVDHARVEAQNHRFTYDEPMR 108
>gi|146414760|ref|XP_001483350.1| proteasome component PUP2 [Meyerozyma guilliermondii ATCC 6260]
gi|146391823|gb|EDK39981.1| proteasome component PUP2 [Meyerozyma guilliermondii ATCC 6260]
Length = 251
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 58/102 (56%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR + FSPEGRL+QV+Y G ++G E VTS LL+ TS EK
Sbjct: 8 YDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGIATSEGVILGVEKRVTSSLLE-HTSIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA +I+ ARV + + Y E IQ
Sbjct: 67 IVEIDSHIGCAMSGLTADARSMIDHARVSSLTHNLYYDEEIQ 108
>gi|159462714|ref|XP_001689587.1| 20S proteasome alpha subunit D [Chlamydomonas reinhardtii]
gi|158283575|gb|EDP09325.1| 20S proteasome alpha subunit D [Chlamydomonas reinhardtii]
Length = 254
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 61/109 (55%), Gaps = 20/109 (18%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM------GCL-VG-----------ENNVTSKLLQTST 42
MS RYDR TVFSP+G L+QV+Y G L VG E T+KL Q +
Sbjct: 1 MSARYDRAITVFSPDGHLFQVEYALEAVRKGALAVGVKGKDTVVLGVEKKSTAKL-QDAR 59
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ-DY 90
+ K+ K+DDH+ A AG+ +DA +L+N AR++A+ Y E + DY
Sbjct: 60 TVRKIVKVDDHICLAFAGLTADARVLVNRARIEAQSYRLTLDEKVTVDY 108
>gi|384251552|gb|EIE25029.1| proteasome subunit alpha [Coccomyxa subellipsoidea C-169]
Length = 240
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G LV E VTS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGTTAIGVRSKEGVVLVVEKRVTSPLLEPS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ ++D H+ A++G+ +DA LI ARV+ +++ + Y EP+
Sbjct: 67 VAEVDTHIGVAMSGLTADARTLIEHARVETQQHRFTYNEPM 107
>gi|84490036|ref|YP_448268.1| proteasome subunit alpha [Methanosphaera stadtmanae DSM 3091]
gi|84373355|gb|ABC57625.1| PsmA [Methanosphaera stadtmanae DSM 3091]
Length = 287
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGCLVGEN-------NVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+Q++Y +G + E + SKL+ +S EK
Sbjct: 9 YDRALTVFSPDGRLFQIEYAREAVKRGTTSVGIISKEGVVFAVDKKIKSKLI-VPSSIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++KIDDH+A A +G+++DA LI+ AR QA+ Y EPI
Sbjct: 68 IFKIDDHIATASSGLVADARRLIDIARNQAQVNKLQYHEPI 108
>gi|352682024|ref|YP_004892548.1| proteasome subunit alpha [Thermoproteus tenax Kra 1]
gi|350274823|emb|CCC81469.1| proteasome, subunit alpha [Thermoproteus tenax Kra 1]
Length = 239
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYMG------------------CLVGENNVTSKLLQTSTSAEK 46
YDR T+FSPEG+LYQV+Y G L E S+L S S EK
Sbjct: 9 YDRAITIFSPEGKLYQVEYAGEAVKRGWPTVGVKCSSGVVLAAEKRKISQLFDPS-SLEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+Y IDDH A + +G+++DA +L++ AR A + + Y EPI
Sbjct: 68 IYIIDDHAAISPSGLLADARVLVDYARSVAMTHRFLYDEPI 108
>gi|387914854|gb|AFK11036.1| proteasome subunit alpha type-5 [Callorhinchus milii]
gi|392879026|gb|AFM88345.1| proteasome subunit alpha type-5 [Callorhinchus milii]
Length = 241
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E VTS L++ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTAEGVVLAVEKRVTSPLMEPS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ +ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 67 IVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105
>gi|18313186|ref|NP_559853.1| proteasome subunit alpha [Pyrobaculum aerophilum str. IM2]
gi|20532211|sp|Q8ZVM1.1|PSA_PYRAE RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|18160700|gb|AAL64035.1| proteasome alpha subunit [Pyrobaculum aerophilum str. IM2]
Length = 243
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYMG------------------CLVGENNVTSKLLQTSTSAEK 46
YDR T+FSPEG++YQV+Y G L E S L +S S EK
Sbjct: 9 YDRAITIFSPEGKIYQVEYAGEAVKRGWPTVGVKCKAGVVLTAEKRKISALFDSS-SLEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+Y ID+HVA + +G+++DA ILI+ AR A + + Y EPI
Sbjct: 68 IYLIDEHVAASPSGLLADARILIDYARDVALSHRFIYDEPI 108
>gi|340959938|gb|EGS21119.1| hypothetical protein CTHT_0029600 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 261
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 19/97 (19%)
Query: 10 TVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEKMYKID 51
+ FSPEGRL+QV+Y G ++G E VTS LL+TS S EK+ +ID
Sbjct: 29 STFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSTLLETS-SVEKIVEID 87
Query: 52 DHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
H+ CA++G+ +DA ++ ARV+ + +A+ Y EP++
Sbjct: 88 RHIGCAMSGLQADARSMVEHARVECQSHAFHYNEPLR 124
>gi|406601407|emb|CCH46960.1| putative proteasome subunit alpha type-4 [Wickerhamomyces
ciferrii]
Length = 230
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDYMGCLVGENNVTSKLLQTST---SAEKMYKIDDHVACAV 58
SRRYD +TT+FSPEGRLYQV+Y + +L T +AE+ V AV
Sbjct: 3 SRRYDSRTTIFSPEGRLYQVEYALEAISHAGTAIGILATDGIVLAAER------KVTMAV 56
Query: 59 AGIMSDANILINTARVQARRYAYAYQEPI 87
AG+ +DA ILIN+ARVQA+ Y Y E I
Sbjct: 57 AGMTADAGILINSARVQAQNYLKTYNEEI 85
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDYKD++T +EA +LALKVL KTMD+T+L+SEK+E A + +GKV R+ P+ + L
Sbjct: 157 QDYKDEITLKEASELALKVLSKTMDTTTLSSEKIEFATIQKDKNGKVYQRLWKPDEIEKL 216
Query: 148 LENFGV 153
L G+
Sbjct: 217 LNETGI 222
>gi|448358683|ref|ZP_21547360.1| proteasome subunit alpha [Natrialba chahannaoensis JCM 10990]
gi|445645265|gb|ELY98271.1| proteasome subunit alpha [Natrialba chahannaoensis JCM 10990]
Length = 282
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 55/101 (54%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM------------------GCLVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y L + S LL+ S S EK
Sbjct: 11 YDRGHTIFSPDGRLYQVEYAREAVERGSPSVGVVTDTGVVLAARKRLRSPLLE-SKSVEK 69
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++++DDHVA A AG +DA L+ TAR + +R+ Y EPI
Sbjct: 70 IHRVDDHVAVATAGHAADARQLVETARKRCQRHRLRYAEPI 110
>gi|126179622|ref|YP_001047587.1| proteasome subunit alpha [Methanoculleus marisnigri JR1]
gi|166199287|sp|A3CW55.1|PSA_METMJ RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|125862416|gb|ABN57605.1| Proteasome endopeptidase complex [Methanoculleus marisnigri JR1]
Length = 240
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGC-----LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRLYQV+Y + C L+ + VTS+LL+ S EK
Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCSEGVVLIVDKRVTSRLLE-PVSIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++KID H+ A +G++ DA L++ ARV+++ +Y EPI
Sbjct: 68 IFKIDAHIGVASSGLVGDARSLVDRARVESQINRVSYNEPI 108
>gi|291001023|ref|XP_002683078.1| proteasome subunit alpha type 5 [Naegleria gruberi]
gi|284096707|gb|EFC50334.1| proteasome subunit alpha type 5 [Naegleria gruberi]
Length = 251
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 19/105 (18%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTST 42
M YDR F+P+GRL+QV+Y +G L E +TS LL+ S
Sbjct: 4 MRSEYDRGVNTFNPQGRLFQVEYAIEAIKLGSTAVGIQTPDGVVLAVEKRLTSSLLEPS- 62
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EK+ +ID H+ CA++G+ +DA L+ ARV+ +++ + Y EP+
Sbjct: 63 SVEKIMEIDSHIGCAMSGLTADARTLVEHARVETQQHRFTYNEPM 107
>gi|453087403|gb|EMF15444.1| 20S proteasome alpha subunit E [Mycosphaerella populorum SO2202]
Length = 245
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------------MGCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E +TS LL+TS S EK
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGISTSAGVILGVEKRITSSLLETS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ +ID H+ CA++G+ +DA ++ ARV ++ + + Y E
Sbjct: 67 IVEIDRHIGCAMSGLQADARSMVEHARVTSQSHEFHYNE 105
>gi|294896444|ref|XP_002775560.1| proteasome subunit alpha type, putative [Perkinsus marinus ATCC
50983]
gi|239881783|gb|EER07376.1| proteasome subunit alpha type, putative [Perkinsus marinus ATCC
50983]
Length = 269
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 57/102 (55%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E V S L++ S S EK
Sbjct: 9 YDRGVNTFSPEGRLFQVEYAIEAVKLGSTAIGITTKEGVVLAVEKRVGSPLIEPS-SIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +I HV CA++G+ +DA L++ ARV+A + + Y EP+Q
Sbjct: 68 LMQIAPHVGCAMSGLTADARTLVDHARVEALNHDFTYNEPMQ 109
>gi|325969159|ref|YP_004245351.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
gi|323708362|gb|ADY01849.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
Length = 246
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 52/101 (51%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYMG------------------CLVGENNVTSKLLQTSTSAEK 46
YDR T+FSPEG LYQV Y G L E S L+ S EK
Sbjct: 9 YDRAITIFSPEGELYQVRYAGEAVKRGWATIGIKCVDGVVLAAEKRKVSSLIDLG-SIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+Y +DDHV A +G++SDA +LI AR +A+ + Y EPI
Sbjct: 68 VYMVDDHVGIAASGLLSDARVLIEYARQEAQTHRLLYDEPI 108
>gi|298714382|emb|CBJ27439.1| 20S proteasome alpha subunit C [Ectocarpus siliculosus]
Length = 318
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 4 RYDRQTTVFSPEGRLYQVDYMGCLVGENNVTSKLLQTSTSAEKMYKIDDHVACAVAGIMS 63
+YD TT+FSP+GRLYQV+Y + +K LQ K ++D H+ C AG+ +
Sbjct: 35 KYDSGTTMFSPKGRLYQVEYAA-----ETIRNKRLQVGDQRVKTSRVDSHIVCTSAGLTA 89
Query: 64 DANILINTARVQARRYAYAYQEPI 87
DA +L+ RV A++++ +QEPI
Sbjct: 90 DAMVLVKDCRVSAQQHSLTFQEPI 113
>gi|302773341|ref|XP_002970088.1| hypothetical protein SELMODRAFT_267349 [Selaginella moellendorffii]
gi|300162599|gb|EFJ29212.1| hypothetical protein SELMODRAFT_267349 [Selaginella moellendorffii]
Length = 237
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 22/119 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ + S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGLKTNHGVVLAVEKRITSPLLEPA-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
+ +ID H+ CA++G+++DA L+ AR + + + ++Y EP+ + T Q LAL+
Sbjct: 67 IMEIDTHIGCAMSGLIADARTLVEHARNETQHHRFSYNEPM---SVESTTQALCDLALR 122
>gi|52550475|gb|AAU84324.1| proteasome alpha subunit [uncultured archaeon GZfos9D1]
Length = 261
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 61/101 (60%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L+ + +TS+LL+ S EK
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAIGIKAQDGVVLLVDKRLTSRLLEGG-SVEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++KID+H+ A +G+++DA +L++ RV+A+ AY E I
Sbjct: 68 IFKIDEHIGAATSGLVADARVLVDRGRVEAQINQIAYGEAI 108
>gi|52548820|gb|AAU82669.1| proteasome alpha subunit [uncultured archaeon GZfos19A5]
Length = 263
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 61/101 (60%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L+ + +TS+LL+ S EK
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAIGIKAQDGVVLLVDKRLTSRLLEGG-SVEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++KID+H+ A +G+++DA +L++ RV+A+ AY E I
Sbjct: 68 IFKIDEHIGAATSGLVADARVLVDRGRVEAQINQIAYGEAI 108
>gi|302807096|ref|XP_002985279.1| hypothetical protein SELMODRAFT_181529 [Selaginella moellendorffii]
gi|300147107|gb|EFJ13773.1| hypothetical protein SELMODRAFT_181529 [Selaginella moellendorffii]
Length = 237
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 22/119 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ + S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGLKTNHGVVLAVEKRITSPLLEPA-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
+ +ID H+ CA++G+++DA L+ AR + + + ++Y EP+ + T Q LAL+
Sbjct: 67 IMEIDTHIGCAMSGLIADARTLVEHARNETQHHRFSYNEPM---SVESTTQALCDLALR 122
>gi|195998175|ref|XP_002108956.1| hypothetical protein TRIADDRAFT_19919 [Trichoplax adhaerens]
gi|190589732|gb|EDV29754.1| hypothetical protein TRIADDRAFT_19919 [Trichoplax adhaerens]
Length = 230
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 61/104 (58%), Gaps = 20/104 (19%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y +G L E +TS L +
Sbjct: 3 MTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIKTSEGIVLAVERRITSPLTEPE 62
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
S EK+ KID+H+ CA++G+++D+ L++TARV+++ + + Y E
Sbjct: 63 -SMEKILKIDNHIGCAMSGLIADSRTLVDTARVESQSHWFTYNE 105
>gi|88603528|ref|YP_503706.1| proteasome subunit alpha [Methanospirillum hungatei JF-1]
gi|88188990|gb|ABD41987.1| Proteasome endopeptidase complex [Methanospirillum hungatei JF-1]
Length = 239
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGC-----LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRLYQV+Y + C L+ + + S+LL+ + S EK
Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCQEGVVLIVDKRINSRLLE-ANSIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++ID+H+ A +G++ DA L++ AR++A+ Y EPI
Sbjct: 68 IFRIDEHIGVASSGLVGDARALVDRARIEAQINRVTYDEPI 108
>gi|385301310|gb|EIF45509.1| proteasome component pup2 [Dekkera bruxellensis AWRI1499]
Length = 265
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MGC------------LVGENNVTSKLLQTSTSAEK 46
YDR + FSPEGRL+QV+Y +G L E VTS LL+ S S EK
Sbjct: 8 YDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGICTSQGVILAVEKRVTSPLLE-SDSVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +++ HV CA++G+ +DA LI+ ARV A ++ Y EPI
Sbjct: 67 IMEVEKHVGCAMSGLTADARSLIDHARVAAVQHDLYYHEPI 107
>gi|302697359|ref|XP_003038358.1| hypothetical protein SCHCODRAFT_49745 [Schizophyllum commune H4-8]
gi|300112055|gb|EFJ03456.1| hypothetical protein SCHCODRAFT_49745, partial [Schizophyllum
commune H4-8]
Length = 234
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 22/137 (16%)
Query: 6 DRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEKM 47
DR FSPEGRL+QV+Y G ++ E V S LL+ S S EK+
Sbjct: 1 DRGVNTFSPEGRLFQVEYAIEAIKLGSTTVGVKTPEGVVIAVEKRVQSPLLEAS-SIEKI 59
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKVL 107
+ID H+ CAV+G+ +DA +++ ARV A+ +A+ Y E I K + Q LAL+
Sbjct: 60 MEIDRHLGCAVSGLTADARTMVDHARVTAQNHAFVYDERI---KVESCTQAVCDLALRFG 116
Query: 108 RKTMDSTSLTSEKLELA 124
D ++ S +A
Sbjct: 117 ESVHDEEAMMSRPFGVA 133
>gi|290998105|ref|XP_002681621.1| proteasome subunit alpha type 7 [Naegleria gruberi]
gi|284095246|gb|EFC48877.1| proteasome subunit alpha type 7 [Naegleria gruberi]
Length = 259
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 56/105 (53%), Gaps = 18/105 (17%)
Query: 4 RYDRQTTVFSPEGRLYQVDYM-------GCLVGENNV----------TSKLLQTSTSAEK 46
RYDR TVFSP G L+QV+Y VG T+ LQ + S K
Sbjct: 3 RYDRAITVFSPNGHLFQVEYAMEAVRKGSTAVGVRGTDIVVLAVERKTAAKLQETRSVRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ-DY 90
+ KIDDH A A AG+ +DA +LIN AR+ A+ YA +++ + DY
Sbjct: 63 IVKIDDHCALAFAGLTADARVLINKARLHAQSYALQFEDQVSIDY 107
>gi|384246440|gb|EIE19930.1| 20S proteasome alpha subunit D [Coccomyxa subellipsoidea C-169]
Length = 248
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 18/108 (16%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYMG-------CLVGENN----------VTSKLLQTSTS 43
M RYDR TVFSP+G L+QV+Y C VG V++ LQ +
Sbjct: 1 MGSRYDRAITVFSPDGHLFQVEYAQEAVKRGVCAVGVRGTDTVVLGVEKVSTAKLQDPRT 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE-PIQDY 90
K+ KID+H+ A AG+ +DA +L+N AR +A+ Y + E P DY
Sbjct: 61 VRKIMKIDEHICLAFAGLTADARVLVNRARTEAQSYRLTFDESPSVDY 108
>gi|225712004|gb|ACO11848.1| Proteasome subunit alpha type-5 [Lepeophtheirus salmonis]
gi|290462585|gb|ADD24340.1| Proteasome subunit alpha type-5 [Lepeophtheirus salmonis]
gi|290561585|gb|ADD38192.1| Proteasome subunit alpha type-5 [Lepeophtheirus salmonis]
Length = 242
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS L++ ST EK
Sbjct: 8 YDRSVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTKDGIVLAVEKRITSSLMEPST-IEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ACA +G++ D+ +LI+ ARV+ + + + Y E ++
Sbjct: 67 IVQIDKHLACAFSGLIPDSKMLIDKARVECQNHWFNYSEKMR 108
>gi|330038801|ref|XP_003239705.1| 26S proteasome SU [Cryptomonas paramecium]
gi|327206629|gb|AEA38807.1| 26S proteasome SU [Cryptomonas paramecium]
Length = 242
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 18/105 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYMGCLVG------------------ENNVTSKLLQTST 42
MSR+YD Q T FSPEGRL +++ + L+ E +T KL Q S
Sbjct: 1 MSRKYDIQMTSFSPEGRLKKIENVLHLINREKSLIAIKTKEGILLAVEKEITFKLNQDSR 60
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++ ++ ID+H+ CA GI SD LIN AR+Q++ + YQ PI
Sbjct: 61 YSDDIFLIDNHIFCATTGIKSDIPTLINYARLQSQVHKQIYQTPI 105
>gi|195123867|ref|XP_002006423.1| GI18573 [Drosophila mojavensis]
gi|193911491|gb|EDW10358.1| GI18573 [Drosophila mojavensis]
Length = 245
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS ++ T EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTKDSVVLAVEKRITSPMMVPKT-VEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ K+DDH+ CA +G+M+DA LI ARV+ + + + Y E
Sbjct: 67 IVKVDDHIGCATSGLMADARTLIERARVECQNHWFVYNE 105
>gi|336254145|ref|YP_004597252.1| proteasome endopeptidase complex [Halopiger xanaduensis SH-6]
gi|335338134|gb|AEH37373.1| Proteasome endopeptidase complex [Halopiger xanaduensis SH-6]
Length = 256
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM------------------GCLVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y L V S LL+ T EK
Sbjct: 10 YDRGHTIFSPDGRLYQVEYAREAVERGSPSVGVVTDDGVVLAARKRVRSPLLEADT-VEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++++DDH+A A AG +DA L++ AR +A+R+ Y EPI
Sbjct: 69 IHRVDDHLAIASAGHAADARQLVDVARREAQRHRLRYGEPI 109
>gi|85105938|ref|XP_962066.1| proteasome component PUP2 [Neurospora crassa OR74A]
gi|28923660|gb|EAA32830.1| proteasome component PUP2 [Neurospora crassa OR74A]
gi|336471729|gb|EGO59890.1| proteasome component PUP2 [Neurospora tetrasperma FGSC 2508]
gi|350292846|gb|EGZ74041.1| proteasome component PUP2 [Neurospora tetrasperma FGSC 2509]
Length = 245
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 62/107 (57%), Gaps = 20/107 (18%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTS 41
M+R YDR FSPEGRL+QV+Y G ++G E VTS LL+TS
Sbjct: 3 MARSEYDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSTLLETS 62
Query: 42 TSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
S EK+ +ID H+ A++G+ +DA +I ARV+ + +A+ Y E ++
Sbjct: 63 -SVEKIVEIDRHIGTAMSGLQADARSMIEHARVECQSHAFNYNEKLR 108
>gi|336371832|gb|EGO00172.1| hypothetical protein SERLA73DRAFT_180614 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384584|gb|EGO25732.1| hypothetical protein SERLADRAFT_466291 [Serpula lacrymans var.
lacrymans S7.9]
Length = 261
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 24/111 (21%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-------MGCLVG-----------ENNVTSKLLQ--- 39
M+RRYD +TT+FSPEGRLYQ++Y G ++G E VT KLL
Sbjct: 1 MARRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLAKDGVVLAAEKKVTGKLLDLSG 60
Query: 40 ---TSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EK++ ++ +V VAG+ SDAN L+N AR A+++ +Y E I
Sbjct: 61 EGGYGGSGEKIFLLNSNVIGGVAGLTSDANSLVNYARTAAQQHLLSYNEDI 111
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGK-VKYRICSPESLTM 146
Q+YKDD+ ++A+ L LKV+ KTMDST+L SEKLE A + L S K K +I P +
Sbjct: 183 QEYKDDILVKDAIALVLKVMSKTMDSTTLGSEKLEFAVLTLDESTKQPKAKIYKPSEIDA 242
Query: 147 LLENFGVAQ 155
LL G+A+
Sbjct: 243 LLRAEGLAK 251
>gi|336477106|ref|YP_004616247.1| proteasome endopeptidase complex subunit alpha [Methanosalsum
zhilinae DSM 4017]
gi|335930487|gb|AEH61028.1| proteasome endopeptidase complex, alpha subunit [Methanosalsum
zhilinae DSM 4017]
Length = 267
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 61/101 (60%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYMG------------------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GR++QV+Y L+ + +TSKL++ + S EK
Sbjct: 9 YDRAITVFSPDGRIFQVEYAREAVKRGTTAAGIKYRDGVALLVDKRITSKLIE-AESIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++ID+H+ A +G+++DA L++ AR++A+ +Y EPI
Sbjct: 68 IFQIDEHIGVATSGLVADARALVDKARIEAQINVVSYDEPI 108
>gi|91772264|ref|YP_564956.1| proteasome subunit alpha [Methanococcoides burtonii DSM 6242]
gi|91711279|gb|ABE51206.1| Proteasome alpha subunit [Methanococcoides burtonii DSM 6242]
Length = 263
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYMG------------------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y L+ + +TS+L++ + S EK
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAAGIKAKDGVVLIVDKRITSRLIE-AESIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++ID+H+ A +G+++DA L++ ARV+A+ Y EPI
Sbjct: 68 IFQIDEHIGVATSGLVADARALVDRARVEAQINMATYDEPI 108
>gi|323452552|gb|EGB08426.1| hypothetical protein AURANDRAFT_60080 [Aureococcus anophagefferens]
Length = 247
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 19/102 (18%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G L E VTS L+++S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIQAVKLGSTSIGIKTADGVVLAVEKRVTSTLMESS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
K+ +ID H A++G+++DA L++ ARV+A+ + + Y EP+
Sbjct: 66 KVMEIDSHCGAAMSGLIADARTLVDHARVEAQNHRFTYDEPM 107
>gi|224071019|ref|XP_002303332.1| predicted protein [Populus trichocarpa]
gi|118485571|gb|ABK94637.1| unknown [Populus trichocarpa]
gi|222840764|gb|EEE78311.1| predicted protein [Populus trichocarpa]
Length = 237
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 22/119 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR + FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVSTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
+ +ID+ + CA++G+++DA L+ ARV+ + + ++Y EP+ + T Q LAL+
Sbjct: 67 VMEIDECIGCAMSGLIADARTLVEHARVETQNHRFSYGEPM---TVESTTQALCDLALR 122
>gi|156045147|ref|XP_001589129.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154694157|gb|EDN93895.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 242
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 59/95 (62%), Gaps = 19/95 (20%)
Query: 12 FSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEKMYKIDDH 53
FSPEGRL+QV+Y G ++G E VTS LL+TS S EK+ +ID H
Sbjct: 12 FSPEGRLFQVEYSLEAIKLGSTAIGVATGGGVVLGVEKRVTSTLLETS-SVEKIVEIDRH 70
Query: 54 VACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ CA++G+ +DA ++ ARV+++ +++ Y EP++
Sbjct: 71 IGCAMSGLQADARSMVEHARVESQNHSFHYNEPLR 105
>gi|114050993|ref|NP_001040146.1| proteasome zeta subunit [Bombyx mori]
gi|87248207|gb|ABD36156.1| proteasome zeta subunit [Bombyx mori]
Length = 243
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS L++ T+ EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLME-PTTIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ ++D H+ACAV+G+M+D+ L+ ARV+ + + + Y E
Sbjct: 67 IVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNE 105
>gi|399218309|emb|CCF75196.1| unnamed protein product [Babesia microti strain RI]
Length = 257
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR FSPEGRL+QV+Y G + + S L TS EK+
Sbjct: 8 YDRGVNTFSPEGRLFQVEYALGAIKFGSTAIGITTKEGVIFASEHRASSPLLVLTSVEKI 67
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ID H+AC ++G+++DA L+N R + + + Y EP+
Sbjct: 68 LEIDSHIACTMSGLIADARTLVNHGRTECANHRFVYNEPM 107
>gi|154151363|ref|YP_001404981.1| proteasome subunit alpha [Methanoregula boonei 6A8]
gi|166199284|sp|A7I9C7.1|PSA_METB6 RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|153999915|gb|ABS56338.1| Proteasome endopeptidase complex [Methanoregula boonei 6A8]
Length = 240
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 62/102 (60%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRLYQV+Y +G L+ + V+SKLL++S S EK
Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKAHDGVVLIVDKRVSSKLLESS-SIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
++KID+H+ A +G++ DA L++ AR++ + +Y E I+
Sbjct: 68 IFKIDEHIGVASSGLVGDARALVDRARIECQINRVSYDERIE 109
>gi|260945467|ref|XP_002617031.1| proteasome component PUP2 [Clavispora lusitaniae ATCC 42720]
gi|238848885|gb|EEQ38349.1| proteasome component PUP2 [Clavispora lusitaniae ATCC 42720]
Length = 252
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 59/102 (57%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR + FSPEGRL+QV+Y G ++G E VTS LL++S S EK
Sbjct: 8 YDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGISTAEGVVLGVEKRVTSPLLESS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA +I+ ARV + + Y E IQ
Sbjct: 67 IVEIDRHIGCAMSGLTADARSMIDHARVSSLTHDLYYDEQIQ 108
>gi|294953367|ref|XP_002787728.1| proteasome subunit alpha type 5-2, putative [Perkinsus marinus ATCC
50983]
gi|239902752|gb|EER19524.1| proteasome subunit alpha type 5-2, putative [Perkinsus marinus ATCC
50983]
Length = 237
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E + S L++ S S EK
Sbjct: 9 YDRGVNTFSPEGRLFQVEYAIEAVKLGSTAIGITTKEGVVLAVEKRIGSPLIEPS-SIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +I HV CA++G+ +DA L++ ARV+A + + Y EP+Q
Sbjct: 68 IMQIAPHVGCAMSGLTADARTLVDHARVEALNHDFTYNEPMQ 109
>gi|195488764|ref|XP_002092452.1| ProsMA5 [Drosophila yakuba]
gi|194178553|gb|EDW92164.1| ProsMA5 [Drosophila yakuba]
Length = 244
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS L+ +ST EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVSST-VEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ ++D H+ CA +G+M+DA LI ARV+ + + + Y E
Sbjct: 67 IVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNE 105
>gi|440789932|gb|ELR11223.1| proteasome subunit alpha type5, putative [Acanthamoeba castellanii
str. Neff]
Length = 253
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MGC------------LVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVILAVEKRLTSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID H+ A++G+ DA LI+ ARV+A+ + + + EP+
Sbjct: 67 IMEIDAHIGAAMSGLTGDAKTLIDYARVEAQNHTFTFDEPM 107
>gi|400601923|gb|EJP69548.1| proteasome A-type and B-type [Beauveria bassiana ARSEF 2860]
Length = 271
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 22/123 (17%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTST 42
++ DR FSPEGRL+QV+Y G ++G E VTS LL+TS
Sbjct: 30 ITSHQDRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSTLLETS- 88
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQL 102
S EK+ +ID H+ CA++G+ +DA +I ARV+ + + + Y E + + T Q L
Sbjct: 89 SVEKIVEIDRHIGCAMSGLQADARSMIEHARVECQNHHFNYNEAL---GVESTTQAICDL 145
Query: 103 ALK 105
AL+
Sbjct: 146 ALR 148
>gi|325959908|ref|YP_004291374.1| proteasome subunit alpha [Methanobacterium sp. AL-21]
gi|325331340|gb|ADZ10402.1| Proteasome subunit alpha [Methanobacterium sp. AL-21]
Length = 249
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G LV + TSKL++ S EK
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTSLGVKSVEGIVLVVDKRPTSKLVEPK-SIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+++IDDH+ A +G+++DA L+ AR++++ Y EPI+
Sbjct: 68 IFQIDDHIGAATSGLVADARALVEKARMESQINKITYNEPIR 109
>gi|440909682|gb|ELR59567.1| Proteasome subunit alpha type-5, partial [Bos grunniens mutus]
Length = 232
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 19/97 (19%)
Query: 7 RQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEKMY 48
R FSPEGRL+QV+Y +G CL E +TS L++ S S EK+
Sbjct: 1 RGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIEKIV 59
Query: 49 KIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 60 EIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 96
>gi|50427903|ref|XP_462564.1| DEHA2G23562p [Debaryomyces hansenii CBS767]
gi|49658234|emb|CAG91075.1| DEHA2G23562p [Debaryomyces hansenii CBS767]
Length = 257
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR + FSPEGRL+QV+Y G ++G E VTS LL+ S S EK
Sbjct: 8 YDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGISTSEGVILGVEKRVTSSLLEHS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ ++D H+ CA++G+ +DA +I+ ARV + + Y E IQ
Sbjct: 67 IIEVDKHIGCAMSGLTADARSMIDHARVSSLTHNLYYDEDIQ 108
>gi|401413456|ref|XP_003886175.1| Alpha 2 subunit of 20S proteasome (ISS), related [Neospora caninum
Liverpool]
gi|325120595|emb|CBZ56149.1| Alpha 2 subunit of 20S proteasome (ISS), related [Neospora caninum
Liverpool]
Length = 258
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-MGC-----------------LVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL S +K
Sbjct: 8 YDRGVNTFSPEGRLFQVEYALGAIKLGSTAVGIQTKDGVILASERRITSCLLD-HQSIQK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +IDDH+ACA++G+++DA LI+ ARV+ + + Y E +
Sbjct: 67 IVEIDDHIACAMSGLIADARTLIDHARVECANHFFTYNEKM 107
>gi|194882257|ref|XP_001975229.1| GG20675 [Drosophila erecta]
gi|190658416|gb|EDV55629.1| GG20675 [Drosophila erecta]
Length = 244
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS L+ +ST EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPFGVVLAVEKRITSPLMVSST-VEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ ++D H+ CA +G+M+DA LI ARV+ + + + Y E
Sbjct: 67 IVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNE 105
>gi|325185909|emb|CCA20413.1| proteasome subunit alpha type5 putative [Albugo laibachii Nc14]
Length = 244
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 58/102 (56%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGR+YQV+Y MG L E +TS LL+ S EK
Sbjct: 8 YDRGVNTFSPEGRIYQVEYAIEAIKMGTTAIGIRTKEGAVLAVEKRLTSPLLEPE-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID HV A++GI SDA ILI+ ARV+A + ++Y + ++
Sbjct: 67 VMEIDRHVGAAMSGITSDAQILIDHARVEATNHWFSYNDKMR 108
>gi|195027251|ref|XP_001986497.1| GH21393 [Drosophila grimshawi]
gi|193902497|gb|EDW01364.1| GH21393 [Drosophila grimshawi]
Length = 245
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS L+ T EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTNDSVVLAVEKRITSPLMVPKT-VEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ K+D+H+ CA +G+M+DA LI ARV+ + + + Y E
Sbjct: 67 IVKVDEHIGCATSGLMADARTLIERARVECQNHWFVYNE 105
>gi|302828268|ref|XP_002945701.1| 20S proteasome alpha subunit E [Volvox carteri f. nagariensis]
gi|300268516|gb|EFJ52696.1| 20S proteasome alpha subunit E [Volvox carteri f. nagariensis]
Length = 249
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 63/110 (57%), Gaps = 27/110 (24%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G L E VTS LL+ S S E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYALEAIKLGSTAIGICTKEGVVLAVEKRVTSPLLEPS-SIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTAR--------VQARRYAYAYQEPI 87
K+ +ID+H+ACA++G+ +DA LI+ AR +Q++++ ++Y EP+
Sbjct: 66 KIMEIDEHMACAMSGLTADAKTLIDHARADTQCFTPMQSQQHRFSYNEPM 115
>gi|297619735|ref|YP_003707840.1| proteasome endopeptidase complex subunit alpha [Methanococcus
voltae A3]
gi|297378712|gb|ADI36867.1| proteasome endopeptidase complex, alpha subunit [Methanococcus
voltae A3]
Length = 254
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGCLVG-----ENNVTSKLLQTSTSAEK 46
YDR T+FSPEGRLYQV+Y + C G + +++KL++ S S EK
Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRISNKLVEVS-SIEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++++DDH+ A +G+++DA +LI+ AR +A+ Y E I
Sbjct: 69 IFQVDDHIVAATSGLVADARVLIDRARTEAQINRITYGEKI 109
>gi|303276861|ref|XP_003057724.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460381|gb|EEH57675.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 238
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E ++S L++ S S +K
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIAIRTDHGVVLAVEKRMSSPLMEPS-SLDK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID H+ACAV+G+ +DA ++ RVQA+ + + Y EP+
Sbjct: 67 IMEIDSHIACAVSGLTADAQSMVEHGRVQAQNHYFTYNEPM 107
>gi|150863866|ref|XP_001382489.2| hypothetical protein PICST_87371 [Scheffersomyces stipitis CBS
6054]
gi|149385122|gb|ABN64460.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 257
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR + FSPEGRL+QV+Y G ++G E V+S LL+ TS EK
Sbjct: 8 YDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGISTSEGVILGVEKRVSSSLLE-HTSIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA +I+ ARV + + Y E IQ
Sbjct: 67 IVEIDKHIGCAMSGLTADARSMIDHARVSSLTHNLYYDEDIQ 108
>gi|38048537|gb|AAR10171.1| similar to Drosophila melanogaster ProsMA5, partial [Drosophila
yakuba]
Length = 185
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS L+ +ST EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVSST-VEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ ++D H+ CA +G+M+DA LI ARV+ + + + Y E
Sbjct: 67 IVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNE 105
>gi|91087635|ref|XP_973117.1| PREDICTED: similar to proteasome zeta subunit [Tribolium castaneum]
gi|270009423|gb|EFA05871.1| hypothetical protein TcasGA2_TC008671 [Tribolium castaneum]
Length = 242
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS L++ T+ EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSPLME-PTTIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ ++D H+ CAV+G+M+D+ +I+ ARV+ + + + Y E
Sbjct: 67 IVEVDKHIGCAVSGLMADSRTMIDRARVECQNHWFVYNE 105
>gi|344303874|gb|EGW34123.1| hypothetical protein SPAPADRAFT_59544 [Spathaspora passalidarum
NRRL Y-27907]
Length = 255
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------------MGCLVG-ENNVTSKLLQTSTSAEK 46
YDR + FSPEGRL+QV+Y G ++G E VTS LL+ S S EK
Sbjct: 8 YDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGISTSQGVILGVEKRVTSSLLEAS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ CA++G+ +DA +I+ ARV + + Y E I+
Sbjct: 67 IIEIDHHIGCAMSGLTADARSMIDHARVSSLTHNLYYDEDIR 108
>gi|150400619|ref|YP_001324385.1| proteasome subunit alpha [Methanococcus aeolicus Nankai-3]
gi|150013322|gb|ABR55773.1| Proteasome endopeptidase complex [Methanococcus aeolicus Nankai-3]
Length = 271
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR TVFSPEGRLYQV+Y +G L + + SKL++ S EK
Sbjct: 10 YDRAITVFSPEGRLYQVEYAREAVRRGTTAIGIKYSGGVILAVDRRIMSKLIE-KYSVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++ ID+H+ A +G+++DA IL++ ARV+A+ Y EP+
Sbjct: 69 IFHIDEHIMAASSGLIADARILVDRARVEAQINKITYGEPM 109
>gi|237835989|ref|XP_002367292.1| proteasome subunit alpha type 5, putative [Toxoplasma gondii ME49]
gi|211964956|gb|EEB00152.1| proteasome subunit alpha type 5, putative [Toxoplasma gondii ME49]
gi|221484916|gb|EEE23206.1| proteasome subunit alpha type, putative [Toxoplasma gondii GT1]
gi|221506028|gb|EEE31663.1| proteasome subunit alpha type, putative [Toxoplasma gondii VEG]
Length = 258
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-MGC-----------------LVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL S +K
Sbjct: 8 YDRGVNTFSPEGRLFQVEYALGAIKLGSTAVGIQTKDGVILASERRITSCLLD-HRSIQK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +IDDH+ACA++G+++DA LI+ ARV+ + + Y E +
Sbjct: 67 IVEIDDHIACAMSGLIADARTLIDHARVECANHFFTYNEKM 107
>gi|52550031|gb|AAU83880.1| proteasome alpha subunit [uncultured archaeon GZfos34H10]
Length = 245
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 61/101 (60%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L+ + +TS+LL+ S EK
Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAQDGVALLVDKRLTSRLLEGG-SVEK 65
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++++D+H+ A +G+++DA +LI+ R++++ Y EPI
Sbjct: 66 IFRLDEHIGAATSGLVADARMLIDRGRIESQINKVVYDEPI 106
>gi|307187742|gb|EFN72714.1| Proteasome subunit alpha type-5 [Camponotus floridanus]
Length = 270
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G L E +TS L++ T+ E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIATTEGVVLAVEKRITSTLME-PTTVE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA +G+M+D+ +I+ ARV+ + + + Y E
Sbjct: 66 KIVEIDKHIGCAASGLMADSRTMIDRARVECQNHWFVYNE 105
>gi|345320566|ref|XP_001516559.2| PREDICTED: proteasome subunit alpha type-5-like, partial
[Ornithorhynchus anatinus]
Length = 212
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 19/97 (19%)
Query: 7 RQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEKMY 48
R FSPEGRL+QV+Y +G CL E +TS L++ S S EK+
Sbjct: 6 RGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIEKIV 64
Query: 49 KIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ID H+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 65 EIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 101
>gi|307209861|gb|EFN86640.1| Proteasome subunit alpha type-5 [Harpegnathos saltator]
Length = 242
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 22/132 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G L E +TS L++ T+ E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIATTEGVVLAVEKRITSTLME-PTTVE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
K+ +ID H+ CA +G+M+D+ +I+ ARV+ + + + Y E + + T Q LA++
Sbjct: 66 KIVEIDKHIGCAASGLMADSRTMIDRARVECQNHWFVYNEKM---TVESTAQAVSNLAIQ 122
Query: 106 VLRKTMDSTSLT 117
D T+++
Sbjct: 123 FGDSDDDGTAMS 134
>gi|126459549|ref|YP_001055827.1| proteasome subunit alpha [Pyrobaculum calidifontis JCM 11548]
gi|126249270|gb|ABO08361.1| transcriptional regulator, Fis family [Pyrobaculum calidifontis JCM
11548]
Length = 242
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYMG------------------CLVGENNVTSKLLQTSTSAEK 46
YDR T+FSPEG++YQV+Y G L E S L TS EK
Sbjct: 9 YDRAITIFSPEGKIYQVEYAGEAVKRGWPTVGVKCKGGVVLAAEKRKISALFD-PTSLEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+Y +D+HVA + +G+++DA ILI+ AR A + + Y EPI
Sbjct: 68 IYLVDEHVAISPSGLLADARILIDYARDVALSHRFIYDEPI 108
>gi|346323372|gb|EGX92970.1| proteasome component PUP2 [Cordyceps militaris CM01]
Length = 302
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 64/118 (54%), Gaps = 22/118 (18%)
Query: 6 DRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEKM 47
DR FSPEGRL+QV+Y G ++G E VTS LL+TS S EK+
Sbjct: 66 DRGINTFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVILGVEKRVTSTLLETS-SVEKI 124
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
+ID H+ CA++G+ +DA +I ARV+ + + + Y E + + T Q LAL+
Sbjct: 125 VEIDRHIGCAMSGLQADARSMIEHARVECQNHHFNYNEAL---GVESTTQAICDLALR 179
>gi|222709117|gb|ACM67306.1| proteasome subunit alpha type 5 [Schistosoma japonicum]
Length = 248
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 22/131 (16%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++ E V S L+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEATKLGSTGIGIKTNEGVVMAVEKRVNSTLIIPS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
++++D H+ACAV+G+++DA LI AR +A + + Y E + +D+T+ + LAL +
Sbjct: 67 IFEVDKHIACAVSGLVADARTLIERARTEAAHHWFVYNEKMA--IEDVTKAVS-NLALAL 123
Query: 107 LRKTMDSTSLT 117
M+S +++
Sbjct: 124 GDDDMESGAMS 134
>gi|226487862|emb|CAX75596.1| Rho-associated protein kinase 1 [Schistosoma japonicum]
Length = 248
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 22/131 (16%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++ E V S L+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEATKLGSTGIGIKTNEGVVMAVEKRVNSTLIIPS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
++++D H+ACAV+G+++DA LI AR +A + + Y E + +D+T+ + LAL
Sbjct: 67 IFEVDKHIACAVSGLVADAKTLIERARTEAAHHWFVYNEKMA--IEDVTKAVS-NLALAF 123
Query: 107 LRKTMDSTSLT 117
M+S +++
Sbjct: 124 GDDDMESGAMS 134
>gi|332016307|gb|EGI57220.1| Proteasome subunit alpha type-5 [Acromyrmex echinatior]
Length = 242
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 22/131 (16%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS L++ T+ EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIATTEGVVLAVEKRITSTLME-PTTVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID H+ CA +G+M+D+ +I+ ARV+ + + + Y E + + T Q LA++
Sbjct: 67 IVEIDKHIGCAASGLMADSRTMIDRARVECQNHWFVYNEKM---TVESTAQAVSNLAIQF 123
Query: 107 LRKTMDSTSLT 117
D T+++
Sbjct: 124 GDSDDDGTAMS 134
>gi|225718548|gb|ACO15120.1| Proteasome subunit alpha type-5 [Caligus clemensi]
Length = 243
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS L++ S S EK
Sbjct: 8 YDRSVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQSSAGVVLAVEKRITSPLMEPS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+ACA +G++ D+ +LI+ ARV+ + + + Y E ++
Sbjct: 67 IVEIDSHMACAFSGLIPDSKMLIDKARVECQSHWFNYAEKMK 108
>gi|307104566|gb|EFN52819.1| hypothetical protein CHLNCDRAFT_26444 [Chlorella variabilis]
Length = 240
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++ E VTS LL+ TS EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIAVRTDEGVVMAVEKRVTSPLLE-PTSIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ ++D+H+ A++G+ +DA LI+ RV+ +++ + Y EP+
Sbjct: 67 VAEVDEHIGVAMSGLTADARTLIDHGRVETQQHRFTYNEPM 107
>gi|195584184|ref|XP_002081894.1| GD11263 [Drosophila simulans]
gi|194193903|gb|EDX07479.1| GD11263 [Drosophila simulans]
Length = 244
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS L+ ST EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPST-VEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ ++D H+ CA +G+M+DA LI ARV+ + + + Y E
Sbjct: 67 IVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNE 105
>gi|20090630|ref|NP_616705.1| proteasome subunit alpha [Methanosarcina acetivorans C2A]
gi|23821985|sp|Q8TPX5.1|PSA_METAC RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|19915673|gb|AAM05185.1| multicatalytic endopeptidase complex, subunit alpha [Methanosarcina
acetivorans C2A]
Length = 247
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 63/101 (62%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L+ + +TS+L++ + S EK
Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVE-AESIEK 65
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++ID+H+ A +G+++DA L++ ARV+A+ +Y EPI
Sbjct: 66 IFQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPI 106
>gi|374628426|ref|ZP_09700811.1| proteasome endopeptidase complex, alpha subunit [Methanoplanus
limicola DSM 2279]
gi|373906539|gb|EHQ34643.1| proteasome endopeptidase complex, alpha subunit [Methanoplanus
limicola DSM 2279]
Length = 253
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGC-----LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRLYQV+Y + C L+ + ++SKLL+ TS EK
Sbjct: 11 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCSDGIVLIVDKRISSKLLE-QTSIEK 69
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++ ID+H+A A +G++ DA L++ ARV+++ Y E I
Sbjct: 70 IFMIDEHIAVASSGLVGDARALVDRARVESQINRVTYNESI 110
>gi|302668486|ref|XP_003025814.1| hypothetical protein TRV_00017 [Trichophyton verrucosum HKI 0517]
gi|291189943|gb|EFE45203.1| hypothetical protein TRV_00017 [Trichophyton verrucosum HKI 0517]
Length = 244
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 58/97 (59%), Gaps = 19/97 (19%)
Query: 10 TVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEKMYKID 51
+ FSPEGRL+QV+Y G ++G E VTS LL+TS S EK+ +ID
Sbjct: 12 STFSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVVLGVEKRVTSTLLETS-SVEKIVEID 70
Query: 52 DHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
H+ CA++G+ +DA ++ ARV+ + + + Y EP++
Sbjct: 71 QHIGCAMSGLQADARSMVEHARVETQNHRFHYSEPLR 107
>gi|195335201|ref|XP_002034263.1| GM21770 [Drosophila sechellia]
gi|194126233|gb|EDW48276.1| GM21770 [Drosophila sechellia]
Length = 244
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS L+ ST EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSPLMVPST-VEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ ++D H+ CA +G+M+DA LI ARV+ + + + Y E
Sbjct: 67 IVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNE 105
>gi|195430738|ref|XP_002063405.1| GK21413 [Drosophila willistoni]
gi|194159490|gb|EDW74391.1| GK21413 [Drosophila willistoni]
Length = 245
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS L+ ST EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGISTSEGVVLAVEKRITSSLMVPST-VEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ ++D H+ CA +G+M+DA LI ARV+ + + + Y E
Sbjct: 67 IVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNE 105
>gi|393217727|gb|EJD03216.1| N-terminal nucleophile aminohydrolase [Fomitiporia mediterranea
MF3/22]
Length = 263
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 26/113 (23%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-------MGCLVG-----------ENNVTSKLLQ--- 39
M+RRYD +TT+FSPEGRLYQ++Y G ++G E VT KLL
Sbjct: 1 MARRYDSRTTIFSPEGRLYQIEYAMEAISHAGTVLGVLSKEGVVLAAEKKVTGKLLDLSG 60
Query: 40 -----TSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S EK++ ++ +V VAG +DA L+N AR A+R+ ++Y E I
Sbjct: 61 TTTGGYGGSGEKIFLLNSNVVAGVAGYTADAISLVNYARQAAQRHLFSYSEDI 113
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKV-KYRICSPESLTM 146
Q+YKD++T EA+ L LK L KTMDST+L SEKLE A + L K + +I P +
Sbjct: 185 QEYKDEITLDEAIGLVLKTLSKTMDSTTLGSEKLEFATLTLDKETKTPRAKIYRPAEVDA 244
Query: 147 LLENFGVAQPASEV 160
LL +A+ +V
Sbjct: 245 LLAKHNLAKKDEDV 258
>gi|312137045|ref|YP_004004382.1| proteasome endopeptidase complex subunit alpha [Methanothermus
fervidus DSM 2088]
gi|311224764|gb|ADP77620.1| proteasome endopeptidase complex, alpha subunit [Methanothermus
fervidus DSM 2088]
Length = 251
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 61/102 (59%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L+ + TS+L++ S EK
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTSLGVKSKEGIVLLVDKRPTSRLVEPK-SIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+++ID+H+ A +G+++DA ++I AR++A+ Y EPI+
Sbjct: 68 IFQIDEHIGAATSGLVADARVIIEKARIEAQINRITYNEPIR 109
>gi|297794401|ref|XP_002865085.1| hypothetical protein ARALYDRAFT_920118 [Arabidopsis lyrata subsp.
lyrata]
gi|297310920|gb|EFH41344.1| hypothetical protein ARALYDRAFT_920118 [Arabidopsis lyrata subsp.
lyrata]
Length = 250
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDYMGCLVGENNVTSKL-----------------LQTSTSAEK 46
RYDR TVFSP+G L+QV+Y V + N T + LQ S SA K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNATVGVRGTDTVVLAVEKKSTPKLQDSRSARK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +D+H+A A AG+ +DA +LIN AR++ + + ++P+
Sbjct: 63 IVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPV 103
>gi|24654389|ref|NP_725669.1| proteasome alpha5 subunit, isoform A [Drosophila melanogaster]
gi|24654391|ref|NP_477202.2| proteasome alpha5 subunit, isoform B [Drosophila melanogaster]
gi|12643296|sp|Q95083.2|PSA5_DROME RecName: Full=Proteasome subunit alpha type-5
gi|7302800|gb|AAF57875.1| proteasome alpha5 subunit, isoform A [Drosophila melanogaster]
gi|16769466|gb|AAL28952.1| LD33318p [Drosophila melanogaster]
gi|21645223|gb|AAM70874.1| proteasome alpha5 subunit, isoform B [Drosophila melanogaster]
gi|220944274|gb|ACL84680.1| ProsMA5-PA [synthetic construct]
gi|220954210|gb|ACL89648.1| ProsMA5-PA [synthetic construct]
Length = 244
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS L+ ST EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPST-VEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ ++D H+ CA +G+M+DA LI ARV+ + + + Y E
Sbjct: 67 IVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNE 105
>gi|195382805|ref|XP_002050119.1| GJ20367 [Drosophila virilis]
gi|194144916|gb|EDW61312.1| GJ20367 [Drosophila virilis]
Length = 245
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 19/102 (18%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G L E +TS ++ T E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTNDSVVLAVEKRITSPMMVPKT-VE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
K+ K+D+H+ CA +G+M+DA LI ARV+ + + + Y E +
Sbjct: 66 KIVKVDEHIGCATSGLMADARTLIERARVECQNHWFVYNEAM 107
>gi|1498589|gb|AAB93421.1| 20S proteasome alpha subunit PSMA5 [Drosophila melanogaster]
Length = 244
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS L+ ST EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPST-VEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ ++D H+ CA +G+M+DA LI ARV+ + + + Y E
Sbjct: 67 IVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNE 105
>gi|119719497|ref|YP_919992.1| proteasome subunit alpha [Thermofilum pendens Hrk 5]
gi|119524617|gb|ABL77989.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
Length = 238
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 21/101 (20%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSPEGRLYQV+Y +G L E S L++ + EK
Sbjct: 10 YDRAITIFSPEGRLYQVEYAFEAVKRGMTALGVKAVDGVVLAVEKRSASPLVEGT---EK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ KID HV A AG+ DA +LI+ AR+ A+ + Y EPI
Sbjct: 67 IKKIDSHVGVAFAGLFGDARVLIDQARIYAQSHRLVYGEPI 107
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 14/107 (13%)
Query: 54 VACAVAGIMSDANILINT------ARVQARRYAYAYQEP----IQDYKDDMTRQEAVQLA 103
VA AG+ LI T R +AR Q+ +++Y DD+ +EA LA
Sbjct: 134 VAFLFAGVDRKGPHLIQTDPGGTYLRCKARAIGAGAQKALDLFVKEYHDDIKIEEATLLA 193
Query: 104 LKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLLEN 150
L+ L++ M+ T E +ELA + + +++I S E L L E
Sbjct: 194 LRGLKEAMED-GFTPENIELARIDVYTK---EFKIFSTEELAKLFEK 236
>gi|29841012|gb|AAP06025.1| similar to NM_011967 proteasome (prosome, macropain) subunit, alpha
type 5 in Mus musculus [Schistosoma japonicum]
gi|226471102|emb|CAX70632.1| Rho-associated protein kinase 1 [Schistosoma japonicum]
gi|226471104|emb|CAX70633.1| Rho-associated protein kinase 1 [Schistosoma japonicum]
gi|226487864|emb|CAX75597.1| Rho-associated protein kinase 1 [Schistosoma japonicum]
gi|226487866|emb|CAX75598.1| Rho-associated protein kinase 1 [Schistosoma japonicum]
Length = 248
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 22/131 (16%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++ E V S L+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEATKLGSTGIGIKTNEGVVMAVEKRVNSTLIIPS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
++++D H+ACAV+G+++DA LI AR +A + + Y E + +D+T+ + LAL
Sbjct: 67 IFEVDKHIACAVSGLVADARTLIERARTEAAHHWFVYNEKMA--IEDVTKAVS-NLALAF 123
Query: 107 LRKTMDSTSLT 117
M+S +++
Sbjct: 124 GDDDMESGAMS 134
>gi|339237383|ref|XP_003380246.1| proteasome subunit alpha type-2-A [Trichinella spiralis]
gi|316976947|gb|EFV60138.1| proteasome subunit alpha type-2-A [Trichinella spiralis]
Length = 277
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MGC------------LVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G LV E +TS L+ S S EK
Sbjct: 30 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGILTREGVLLVCEKRITSTLMVPS-SVEK 88
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ KID+H+ C +G++ D L++ ARV+A Y + Y + I
Sbjct: 89 IMKIDNHIGCTTSGLIGDTRTLVDRARVEAANYWFYYGDKI 129
>gi|224105175|ref|XP_002313714.1| predicted protein [Populus trichocarpa]
gi|118484589|gb|ABK94168.1| unknown [Populus trichocarpa]
gi|118489627|gb|ABK96615.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222850122|gb|EEE87669.1| predicted protein [Populus trichocarpa]
Length = 249
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDY-----------MGC------LVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y +G ++G ++ LQ S S +K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDIVVLGVEKKSTAKLQDSRSVKK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +DDHVA AG+ +DA +LIN AR++ + Y ++P+
Sbjct: 63 IVSLDDHVALVCAGLKADARVLINKARIECQSYRLTVEDPV 103
>gi|440635608|gb|ELR05527.1| 20S proteasome subunit alpha 5 [Geomyces destructans 20631-21]
Length = 238
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 60/98 (61%), Gaps = 19/98 (19%)
Query: 9 TTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEKMYKI 50
+T SPEGRL+QV+Y G ++G E VTS LL+TS S EK+ +I
Sbjct: 5 STPSSPEGRLFQVEYSLEAIKLGSTAIGVATGGGVVLGVEKRVTSTLLETS-SVEKIVEI 63
Query: 51 DDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
D H+ CA++G+ +DA ++ ARV+++ +A+ Y EP++
Sbjct: 64 DRHIGCAMSGLQADARSMVEHARVESQNHAFNYNEPLR 101
>gi|256076800|ref|XP_002574697.1| subfamily T1A non-peptidase homologue (T01 family) [Schistosoma
mansoni]
gi|353230534|emb|CCD76951.1| subfamily T1A non-peptidase homologue (T01 family) [Schistosoma
mansoni]
Length = 246
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 22/131 (16%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++ E V S L+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEATKLGSTGIGIKTSEGVVMAVEKRVNSTLIIPS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
++++D H+ACAV+G+++DA LI AR +A + + Y E + +D+T+ + LAL
Sbjct: 67 IFEVDKHIACAVSGLVADARTLIERARTEAAHHWFVYNEKMT--IEDVTKAVS-NLALAF 123
Query: 107 LRKTMDSTSLT 117
M+S +++
Sbjct: 124 GDDDMESGAMS 134
>gi|326936240|ref|XP_003214164.1| PREDICTED: proteasome subunit alpha type-5-like, partial
[Meleagris gallopavo]
Length = 231
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 19/92 (20%)
Query: 12 FSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEKMYKIDDH 53
FSPEGRL+QV+Y +G CL E +TS L++ S S EK+ +ID H
Sbjct: 5 FSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIEKIVEIDSH 63
Query: 54 VACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 64 IGCAMSGLIADAKTLIDKARVETQNHWFTYNE 95
>gi|403411362|emb|CCL98062.1| predicted protein [Fibroporia radiculosa]
Length = 922
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 22/137 (16%)
Query: 6 DRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEKM 47
+R FSPEGRL+QV+Y +G L E V S LL++S S EK+
Sbjct: 185 NRGVNTFSPEGRLFQVEYAIEAIKLGSTTVGVKTKEGVVLAVEKRVQSPLLESS-SIEKI 243
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKVL 107
+ID H+ CA++G+ +DA +I+ ARV ++ +A+ Y E I K + Q LAL+
Sbjct: 244 MEIDRHLGCAMSGLTADARTMIDHARVTSQNHAFTYDERI---KVESVTQAVCDLALRFG 300
Query: 108 RKTMDSTSLTSEKLELA 124
D ++ S +A
Sbjct: 301 ESVHDEDAMMSRPFGVA 317
>gi|443899036|dbj|GAC76369.1| hypothetical protein PANT_20d00083 [Pseudozyma antarctica T-34]
Length = 272
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 22/137 (16%)
Query: 6 DRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEKM 47
DR FSPEGRL+QV+Y G ++G E V SKLL++S S EK+
Sbjct: 14 DRGVNTFSPEGRLFQVEYALEAIKLGSATVGIATKEGVVLGVEKRVQSKLLESS-SIEKI 72
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKVL 107
++D H+ A++G+ +DA +I ARV ++ +A+ Y E I K + Q LAL+
Sbjct: 73 MEVDQHLGAAMSGLTADARTMIEHARVTSQNHAFTYDEEI---KVESVTQAVCDLALRFG 129
Query: 108 RKTMDSTSLTSEKLELA 124
T ++ S +A
Sbjct: 130 ESTAGDEAMMSRPFGVA 146
>gi|194755311|ref|XP_001959935.1| GF13117 [Drosophila ananassae]
gi|190621233|gb|EDV36757.1| GF13117 [Drosophila ananassae]
Length = 243
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS L+ ST EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPST-VEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ ++D H+ CA +G+M+DA LI ARV+ + + + Y E
Sbjct: 67 IVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYDE 105
>gi|227827674|ref|YP_002829454.1| proteasome subunit alpha [Sulfolobus islandicus M.14.25]
gi|227830371|ref|YP_002832151.1| proteasome subunit alpha [Sulfolobus islandicus L.S.2.15]
gi|229579189|ref|YP_002837587.1| proteasome subunit alpha [Sulfolobus islandicus Y.G.57.14]
gi|229582059|ref|YP_002840458.1| proteasome subunit alpha [Sulfolobus islandicus Y.N.15.51]
gi|229584878|ref|YP_002843380.1| proteasome subunit alpha [Sulfolobus islandicus M.16.27]
gi|238619845|ref|YP_002914671.1| proteasome subunit alpha [Sulfolobus islandicus M.16.4]
gi|284997877|ref|YP_003419644.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|385773346|ref|YP_005645912.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
gi|385775984|ref|YP_005648552.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|259535055|sp|C3N5R0.1|PSA_SULIA RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|259535059|sp|C4KHD9.1|PSA_SULIK RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|259535063|sp|C3MQ43.1|PSA_SULIL RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|259535067|sp|C3MVG1.1|PSA_SULIM RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|259535070|sp|C3NHC6.1|PSA_SULIN RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|259535074|sp|C3NEC6.1|PSA_SULIY RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|227456819|gb|ACP35506.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.S.2.15]
gi|227459470|gb|ACP38156.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.14.25]
gi|228009903|gb|ACP45665.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|228012775|gb|ACP48536.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|228019928|gb|ACP55335.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238380915|gb|ACR42003.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284445772|gb|ADB87274.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|323474732|gb|ADX85338.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|323477460|gb|ADX82698.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
Length = 241
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 18/104 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T+FSP+G LYQVDY G ++ ++ L S EK+
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKV 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ-DY 90
+ IDDHV C+ AG+ SD +LI+ AR A ++ Y EP+ DY
Sbjct: 70 FLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDY 113
>gi|256076802|ref|XP_002574698.1| subfamily T1A non-peptidase homologue (T01 family) [Schistosoma
mansoni]
gi|353230532|emb|CCD76949.1| subfamily T1A non-peptidase homologue (T01 family) [Schistosoma
mansoni]
Length = 221
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 22/131 (16%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++ E V S L+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEATKLGSTGIGIKTSEGVVMAVEKRVNSTLIIPS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
++++D H+ACAV+G+++DA LI AR +A + + Y E + +D+T+ + LAL
Sbjct: 67 IFEVDKHIACAVSGLVADARTLIERARTEAAHHWFVYNEKMT--IEDVTKAVS-NLALAF 123
Query: 107 LRKTMDSTSLT 117
M+S +++
Sbjct: 124 GDDDMESGAMS 134
>gi|83769807|dbj|BAE59942.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 266
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 42/158 (26%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-------------------------------------GCL 27
YDR FSPEGRL+QV+Y G +
Sbjct: 8 YDRGINTFSPEGRLFQVEYSLEAIKLGSTAIDYLAAVHYTTGAQHTILTSYQVATNEGVI 67
Query: 28 VG-ENNVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
+G E VTS LL+ S S EK+ +ID H+ CA++G+ +DA L+ ARV+ + +A+ Y EP
Sbjct: 68 LGVEKRVTSTLLEAS-SVEKIVEIDQHIGCAMSGLQADARNLVEHARVECQNHAFHYAEP 126
Query: 87 IQDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELA 124
+ + + Q LAL+ D S+ S +A
Sbjct: 127 L---RVESCTQAICDLALRFGETGDDEESVMSRPFGVA 161
>gi|399218631|emb|CCF75518.1| unnamed protein product [Babesia microti strain RI]
Length = 227
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 60/100 (60%), Gaps = 19/100 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTSAEK 46
YDR T+FSP+G L QV+Y GC+VG E V++KL Q + +A+K
Sbjct: 3 YDRAITIFSPDGHLLQVEYAIEAVRRGGCIVGVTGKDVIVLAAEKKVSNKL-QNNHTAKK 61
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
+ +IDD++A + AG+ +DA +L N AR++ +RY ++P
Sbjct: 62 ILQIDDNLALSFAGLNADARVLANKARLECQRYRLNMEDP 101
>gi|27525440|emb|CAD47833.1| 20S proteasome alpha 5 subunit [Ceratitis capitata]
Length = 241
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 21/104 (20%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E TS+L+ S+S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSSGVVLAAEKRSTSELM-VSSSVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE--PIQ 88
+ ++D H+ C +G+ +DA LI+ ARV+ + Y + Y E PI+
Sbjct: 67 ILQVDRHIGCVTSGLTADARTLIDRARVECQNYWFIYNESMPIE 110
>gi|344230473|gb|EGV62358.1| N-terminal nucleophile aminohydrolase [Candida tenuis ATCC 10573]
Length = 255
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR + FSPEGRL+QV+Y G ++G E VTS LL+ S S EK
Sbjct: 8 YDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGIATSEGVILGVEKRVTSPLLEHS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ ++D H+ CA++G+ +DA +I+ ARV + + Y E IQ
Sbjct: 67 ILEVDRHIGCAMSGLTADARSMIDHARVSSLTHDLYYDEEIQ 108
>gi|333986692|ref|YP_004519299.1| proteasome endopeptidase complex subunit alpha [Methanobacterium
sp. SWAN-1]
gi|333824836|gb|AEG17498.1| proteasome endopeptidase complex, alpha subunit [Methanobacterium
sp. SWAN-1]
Length = 249
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGCLVGENNV-------TSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G E V TSKL++ S EK
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTSLGVKSTEGIVLAVDKRPTSKLVEPK-SIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+++IDDH+ A +G+++DA LI AR++++ Y EPI+
Sbjct: 68 IFQIDDHIGAATSGLVADARSLIEKARMESQINKITYNEPIR 109
>gi|320580947|gb|EFW95169.1| Alpha 5 subunit of the 20S proteasome [Ogataea parapolymorpha DL-1]
Length = 253
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR + FSPEGRL+QV+Y G ++G E VTS LL+ S S EK
Sbjct: 8 YDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGICTSEGVILGVEKRVTSSLLE-SDSIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID H+ CA++G+ +DA +I+ ARV + ++ Y E I
Sbjct: 67 IMEIDRHIGCAMSGLTADARSMIDHARVASVQHDLYYHEKI 107
>gi|448100175|ref|XP_004199291.1| Piso0_002723 [Millerozyma farinosa CBS 7064]
gi|359380713|emb|CCE82954.1| Piso0_002723 [Millerozyma farinosa CBS 7064]
Length = 256
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR + FSPEGRL+QV+Y G ++G E VTS LL+ S S EK
Sbjct: 8 YDRGVSTFSPEGRLFQVEYSLEAIKLGSTSIGIATSEGVILGVEKRVTSPLLEHS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ ++D H+ CA++G+ +DA +I+ ARV + + Y E IQ
Sbjct: 67 IIEVDRHIGCAMSGLTADARYMIDHARVSSLTHNLYYDEDIQ 108
>gi|356559270|ref|XP_003547923.1| PREDICTED: proteasome subunit alpha type-7-like [Glycine max]
Length = 249
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y ++G ++ LQ S S K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDNVVLGVEKKSTAKLQDSRSVRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +DDH+A A AG+ +DA +LIN ARV+ + + ++P+
Sbjct: 63 IVNLDDHIALACAGLKADARVLINRARVECQSHRLTVEDPV 103
>gi|193638896|ref|XP_001945383.1| PREDICTED: proteasome subunit alpha type-5-like [Acyrthosiphon
pisum]
Length = 262
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E +TS L+ TS EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLGVEKRITSPLMITS-KIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
++++D H+ CAV+G+++D+ ++ AR +++ + + Y E
Sbjct: 67 IFEVDKHIGCAVSGLIADSRTMVERARAESQNHWFTYNE 105
>gi|322799258|gb|EFZ20649.1| hypothetical protein SINV_00130 [Solenopsis invicta]
Length = 242
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS L++ T+ EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIATTEGVVLAVEKRITSTLME-PTTVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ +ID H+ CA +G+M+D+ +I+ ARV+ + + + Y E
Sbjct: 67 IVEIDRHIGCAASGLMADSRTMIDRARVECQNHWFVYNE 105
>gi|255073093|ref|XP_002500221.1| predicted protein [Micromonas sp. RCC299]
gi|226515483|gb|ACO61479.1| predicted protein [Micromonas sp. RCC299]
Length = 238
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 18/105 (17%)
Query: 1 MSR-RYDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTST 42
M+R YDR T FSPEGRL+QV+Y G ++ T L +
Sbjct: 3 MTRSEYDRGVTTFSPEGRLFQVEYAIEAIKLGSTAIAILTKEGIVLAVERRTQSPLMVPS 62
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S +K+ +ID HVACAV+G+ +DA ++ RVQA+ + + Y E +
Sbjct: 63 SLDKIMEIDSHVACAVSGLTADAQSMVEHGRVQAQNHYFTYNESM 107
>gi|125807908|ref|XP_001360561.1| GA10654 [Drosophila pseudoobscura pseudoobscura]
gi|195150345|ref|XP_002016115.1| GL11421 [Drosophila persimilis]
gi|54635733|gb|EAL25136.1| GA10654 [Drosophila pseudoobscura pseudoobscura]
gi|194109962|gb|EDW32005.1| GL11421 [Drosophila persimilis]
Length = 244
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS L+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTNEGVVLAVEKRITSPLMVPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ ++D H+ CA +G+M+DA LI ARV+ + + + Y E
Sbjct: 67 IVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNE 105
>gi|294495468|ref|YP_003541961.1| proteasome endopeptidase complex, subunit alpha [Methanohalophilus
mahii DSM 5219]
gi|292666467|gb|ADE36316.1| proteasome endopeptidase complex, alpha subunit [Methanohalophilus
mahii DSM 5219]
Length = 256
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYMG------------------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GR++QV+Y L+ + +TS L++ + S EK
Sbjct: 9 YDRAITVFSPDGRIFQVEYAREAVKRGTTAAGIKARDGVVLLVDKRITSHLIE-AESIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++ID+H+ A +G+++DA L++ ARV+A+ +Y EPI
Sbjct: 68 IFQIDEHIGVATSGLVADARALVDRARVEAQVNVVSYDEPI 108
>gi|304314833|ref|YP_003849980.1| proteasome, subunit alpha [Methanothermobacter marburgensis str.
Marburg]
gi|302588292|gb|ADL58667.1| predicted proteasome, subunit alpha [Methanothermobacter
marburgensis str. Marburg]
Length = 248
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G LV + TSKL++ S EK
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTSLGVKSKEGIVLVVDKRPTSKLVEPK-SIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+++ID+H+ A +G+++DA +I AR++A+ Y EPI+
Sbjct: 68 IFQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIR 109
>gi|52549118|gb|AAU82967.1| multicatalytic endopeptidase complex subunit alpha [uncultured
archaeon GZfos24D9]
Length = 245
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L+ + +TS+LL+ S EK
Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAQDGVALLVDKRLTSRLLEGG-SVEK 65
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++++D H+ A +G+++DA +LI+ RV+++ Y EPI
Sbjct: 66 IFRLDTHIGAATSGLVADARMLIDRGRVESQINKVVYDEPI 106
>gi|410671924|ref|YP_006924295.1| proteasome subunit alpha [Methanolobus psychrophilus R15]
gi|409171052|gb|AFV24927.1| proteasome subunit alpha [Methanolobus psychrophilus R15]
Length = 262
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 61/101 (60%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYMG------------------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y L+ + +TS+L++ + S EK
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAAGVKANDGVVLLVDKRITSRLIE-AESIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++ID+H+ A +G+++DA L++ ARV+++ +Y EPI
Sbjct: 68 IFQIDNHIGAATSGLVADARALVDRARVESQINRVSYDEPI 108
>gi|302500718|ref|XP_003012352.1| hypothetical protein ARB_01311 [Arthroderma benhamiae CBS 112371]
gi|291175910|gb|EFE31712.1| hypothetical protein ARB_01311 [Arthroderma benhamiae CBS 112371]
Length = 329
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 19/95 (20%)
Query: 12 FSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEKMYKIDDH 53
FSPEGRL+QV+Y G ++G E VTS LL+TS S EK+ +ID H
Sbjct: 99 FSPEGRLFQVEYSLEAIKLGSTAIGVATSEGVVLGVEKRVTSTLLETS-SVEKIVEIDQH 157
Query: 54 VACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ CA++G+ +DA ++ ARV+ + + + Y EP++
Sbjct: 158 IGCAMSGLQADARSMVEHARVETQNHRFHYSEPLR 192
>gi|15678713|ref|NP_275829.1| proteasome subunit alpha [Methanothermobacter thermautotrophicus
str. Delta H]
gi|6093783|sp|O26782.1|PSA_METTH RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|2621771|gb|AAB85191.1| proteasome, alpha subunit [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 248
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G LV + TSKL++ S EK
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTSLGVKSKEGIVLVVDKRPTSKLVEPK-SIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+++ID+H+ A +G+++DA +I AR++A+ Y EPI+
Sbjct: 68 IFQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIR 109
>gi|452824079|gb|EME31084.1| 20S proteasome subunit alpha 5 [Galdieria sulphuraria]
Length = 252
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 61/104 (58%), Gaps = 21/104 (20%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E ++S LL+ + S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAMEAIKLGSTAVGIQTAEGVVLAVEKRLSSPLLEPN-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE--PIQ 88
+ +ID+HV CA++G+++DA +I ARV+A+ + + + E P++
Sbjct: 67 LVEIDEHVGCAMSGLVADARTMIEHARVEAQNHRFTFDEAMPVE 110
>gi|448103886|ref|XP_004200149.1| Piso0_002723 [Millerozyma farinosa CBS 7064]
gi|359381571|emb|CCE82030.1| Piso0_002723 [Millerozyma farinosa CBS 7064]
Length = 256
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR + FSPEGRL+QV+Y G ++G E VTS LL+ S S EK
Sbjct: 8 YDRGVSTFSPEGRLFQVEYSLEAIKLGSTSIGIATSEGVILGVEKRVTSPLLEHS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ ++D H+ CA++G+ +DA +I+ ARV + + Y E IQ
Sbjct: 67 IIEVDRHIGCAMSGLTADARYMIDHARVSSLTHNLYYDEDIQ 108
>gi|289740945|gb|ADD19220.1| 20S proteasome regulatory subunit alpha type PSMA5/PUP2 [Glossina
morsitans morsitans]
Length = 242
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS L++ T+ EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVCTSEGVVLAVEKRITSPLME-PTTVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ ++D H+ CA +G+M+DA LI ARV+ + + + Y E
Sbjct: 67 IVEVDRHIGCATSGLMADARTLIERARVECQNHWFVYDE 105
>gi|52549531|gb|AAU83380.1| hypothetical protein GZ27G5_10 [uncultured archaeon GZfos27G5]
Length = 261
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 61/101 (60%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L+ + +TS+LL+ S EK
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAIGIKAQDGIVLLVDKRLTSRLLEGG-SVEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++ID+H+ A +G+++DA +L++ RV+A+ AY E I
Sbjct: 68 IFQIDEHIGAATSGLVADARVLVDRGRVEAQINQIAYGELI 108
>gi|219853090|ref|YP_002467522.1| proteasome subunit alpha [Methanosphaerula palustris E1-9c]
gi|254783492|sp|B8GEZ3.1|PSA_METPE RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|219547349|gb|ACL17799.1| Proteasome endopeptidase complex [Methanosphaerula palustris E1-9c]
Length = 241
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGC-----LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRLYQV+Y + C L+ + V SKLL+ S S EK
Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCNDGIVLLVDKRVNSKLLEPS-SIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++KID+H+ A +G++ DA L++ ARV+++ +Y E I
Sbjct: 68 IFKIDNHIGVASSGLVGDARSLVDRARVESQVNRVSYDEQI 108
>gi|320167332|gb|EFW44231.1| 20S proteasome subunit alpha V [Capsaspora owczarzaki ATCC 30864]
Length = 243
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL TS EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTTEGVVLAVEKRITSPLL-VPTSIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ ++D H+ CA++G+ +DA +I+ R++A+ + + Y E I+
Sbjct: 67 IVEVDRHIGCAMSGLTADARTMIDFGRLEAQNHWFTYNESIK 108
>gi|405976915|gb|EKC41393.1| Proteasome subunit alpha type-7-like protein [Crassostrea gigas]
Length = 249
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 56/104 (53%), Gaps = 17/104 (16%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYMGCLV----------GENNVTSKL-------LQTSTS 43
MS RYDR TVFSP+G L+QV+Y V G N V + LQ +
Sbjct: 1 MSSRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGNNIVVLGVEKKAVAKLQEDRT 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
K+ +DDHVA A AG+ +DA ILIN ARV+ + + ++P+
Sbjct: 61 VRKIALLDDHVALAFAGLTADARILINRARVECQSHKLTVEDPV 104
>gi|432103921|gb|ELK30754.1| Proteasome subunit alpha type-5 [Myotis davidii]
Length = 315
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 19/92 (20%)
Query: 12 FSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEKMYKIDDH 53
FSPEGRL+QV+Y +G CL E +TS L++ S S EK+ +ID H
Sbjct: 89 FSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIEKIVEIDAH 147
Query: 54 VACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 148 IGCAMSGLIADAKTLIDKARVETQNHWFTYNE 179
>gi|15789479|ref|NP_279303.1| proteasome subunit alpha [Halobacterium sp. NRC-1]
gi|169235195|ref|YP_001688395.1| proteasome subunit alpha [Halobacterium salinarum R1]
gi|12644553|sp|P57697.1|PSA_HALSA RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|229598014|sp|B0R2T2.1|PSA_HALS3 RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|10579815|gb|AAG18783.1| proteasome, subunit beta [Halobacterium sp. NRC-1]
gi|167726261|emb|CAP13042.1| proteasome alpha subunit [Halobacterium salinarum R1]
Length = 253
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G LV + S LL+ S S EK
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLVVDKQTRSPLLEGS-SVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++KIDDHV A AG ++DA L++ AR Q++ Y EPI
Sbjct: 69 LHKIDDHVGAASAGHVADARQLVDFARQQSQVERVRYDEPI 109
>gi|412992700|emb|CCO18680.1| predicted protein [Bathycoccus prasinos]
Length = 246
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS L++ S S +K
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTALAISTKHGIVLAVEKRITSPLMEPS-SMDK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID H ACAV+G+ +DA ++ RV+++ + + + EP+
Sbjct: 67 IMEIDSHCACAVSGLTADAKTMVEHGRVESQNHYFTFNEPM 107
>gi|448361942|ref|ZP_21550555.1| proteasome subunit alpha [Natrialba asiatica DSM 12278]
gi|445649622|gb|ELZ02559.1| proteasome subunit alpha [Natrialba asiatica DSM 12278]
Length = 283
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 19/103 (18%)
Query: 3 RRYDRQTTVFSPEGRLYQVDY-----------MGCLVGEN-------NVTSKLLQTSTSA 44
R YDR T+FSP+GRLYQV+Y +G + E V S LL+ S
Sbjct: 8 RAYDRGHTIFSPDGRLYQVEYAREAVERGSPSVGVVTSEGVVLAARKRVRSPLLEPD-SV 66
Query: 45 EKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
EK++++DDH+A A AG +DA L+ AR + +++ Y EPI
Sbjct: 67 EKIHRVDDHLAVATAGHAADARQLVEAARKRCQQHRLQYGEPI 109
>gi|388504570|gb|AFK40351.1| unknown [Lotus japonicus]
Length = 186
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y ++G ++ LQ S S K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDNVVLGVEKKSTAKLQDSRSVRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +DDH+A A AG+ +DA +LIN ARV+ + + ++P+
Sbjct: 63 IVNLDDHIALACAGLKADARVLINRARVECQSHRLTVEDPV 103
>gi|239789506|dbj|BAH71374.1| ACYPI009032 [Acyrthosiphon pisum]
Length = 132
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E +TS L+ TS EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLGVEKRITSPLMITS-KIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
++++D H+ CAV+G+++D+ ++ AR +++ + + Y E
Sbjct: 67 IFEVDKHIGCAVSGLIADSRTMVERARAESQNHWFTYNE 105
>gi|224009700|ref|XP_002293808.1| proteasome subunit alpha type 5 [Thalassiosira pseudonana CCMP1335]
gi|220970480|gb|EED88817.1| proteasome subunit alpha type 5 [Thalassiosira pseudonana CCMP1335]
Length = 244
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MGC------------LVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS LL+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGLQTKSGSILAVEKRLTSPLLEPS-SVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID H+ A++G+++DA L++ ARV+A+ + + Y E I
Sbjct: 67 IAEIDVHIGAAMSGLVADARTLVDHARVEAQNHRFTYDEAI 107
>gi|224078277|ref|XP_002305514.1| predicted protein [Populus trichocarpa]
gi|118484702|gb|ABK94221.1| unknown [Populus trichocarpa]
gi|222848478|gb|EEE86025.1| predicted protein [Populus trichocarpa]
Length = 249
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDY-----------MGC------LVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y +G ++G ++ LQ S S +K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDIVVLGVEKKSTAKLQDSRSVKK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +DDHVA AG+ +DA +L+N AR++ + Y ++P+
Sbjct: 63 IVSLDDHVALVCAGLKADARVLVNKARIECQSYRLTVEDPV 103
>gi|66828049|ref|XP_647379.1| proteasome subunit alpha type 5 [Dictyostelium discoideum AX4]
gi|74897478|sp|Q55G04.1|PSA5_DICDI RecName: Full=Proteasome subunit alpha type-5
gi|60475787|gb|EAL73722.1| proteasome subunit alpha type 5 [Dictyostelium discoideum AX4]
Length = 241
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 59/98 (60%), Gaps = 16/98 (16%)
Query: 5 YDRQTTVFSPEGRLYQVDY----------MGCLVG-----ENNVTSKLLQTSTSAEKMYK 49
YDR FSPEGRL+QV+Y + C G E +TS LL+ S S +K+ +
Sbjct: 8 YDRGVNTFSPEGRLFQVEYALEAIKLGIGVQCEEGVVLAVEKRLTSPLLEPS-SIQKVVE 66
Query: 50 IDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
ID H+ CA++G+++DA +I+ AR++ + + + Y EP+
Sbjct: 67 IDYHLICALSGLVADARTIIDHARIETQNHRFNYNEPM 104
>gi|449456827|ref|XP_004146150.1| PREDICTED: proteasome subunit alpha type-7-like [Cucumis sativus]
Length = 251
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDY-----------MGC------LVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y +G ++G ++ LQ S S K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGSDTIVLGVEKKSTPKLQDSRSVRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +DDH+A A AG+ +DA +LIN ARV+ + + ++P+
Sbjct: 63 IVNLDDHIALACAGLKADARVLINRARVECQSHRLTVEDPV 103
>gi|355572115|ref|ZP_09043297.1| Proteasome subunit alpha [Methanolinea tarda NOBI-1]
gi|354824831|gb|EHF09070.1| Proteasome subunit alpha [Methanolinea tarda NOBI-1]
Length = 241
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 59/101 (58%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGC-----LVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRLYQV+Y + C L+ + V+S+LL+ S S EK
Sbjct: 10 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCRDGVVLIVDKRVSSRLLEAS-SIEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++KID+H+ A +G++ DA L++ AR++ + Y E I
Sbjct: 69 IFKIDEHIGVASSGLVGDARALVDRARIECQINRITYDEKI 109
>gi|354612218|ref|ZP_09030170.1| Proteasome subunit alpha [Halobacterium sp. DL1]
gi|353191796|gb|EHB57302.1| Proteasome subunit alpha [Halobacterium sp. DL1]
Length = 242
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 54/100 (54%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGCLVGENNV------TSKLLQTSTSAEKM 47
YDR T+FSP+GRLYQV+Y +G E V T L +S EK+
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTAEGVVLLVDKRTRSPLLEGSSVEKL 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+K+DDHV A AG ++DA LI+ AR Q++ Y EPI
Sbjct: 70 HKVDDHVGAASAGHVADARQLIDFARQQSQVERVRYDEPI 109
>gi|383625346|ref|ZP_09949752.1| proteasome subunit alpha [Halobiforma lacisalsi AJ5]
gi|448700326|ref|ZP_21699434.1| proteasome subunit alpha [Halobiforma lacisalsi AJ5]
gi|445779866|gb|EMA30781.1| proteasome subunit alpha [Halobiforma lacisalsi AJ5]
Length = 251
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G L + V S LL+ S S EK
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTQDGVVLAVDKRVPSPLLEDS-SVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K DDHV A AG ++DA LI+ AR QA+ Y EPI
Sbjct: 69 LHKADDHVGIASAGHVADARQLIDFARRQAQVNQLRYGEPI 109
>gi|390604864|gb|EIN14255.1| proteasome subunit alpha type 5 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 242
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 25/146 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++G E V S L++ + S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTTVGIKTPEGVVLGVEKRVQSSLIEHA-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKV 106
+ +ID H+ A++G+ +DA +I+ ARV ++ +A+ Y E I K + Q LAL+
Sbjct: 67 IMEIDTHLGAAMSGLTADARTIIDHARVTSQNHAFTYDEKI---KVESVTQAVCDLALRF 123
Query: 107 LRKTMDSTSLTSEKLELAEVFLLPSG 132
D ++ S +A LL +G
Sbjct: 124 GESIHDEDAMMSRPFGVA---LLIAG 146
>gi|52548384|gb|AAU82233.1| multicatalytic endopeptidase complex subunit alpha [uncultured
archaeon GZfos11H11]
Length = 241
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L+ + +TS+LL+ S EK
Sbjct: 3 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAQDGVALLVDKRLTSRLLEGG-SVEK 61
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++++D H+ A +G+++DA +LI+ R++++ Y EPI
Sbjct: 62 IFRLDTHIGAATSGLVADARMLIDRGRIESQINKVVYDEPI 102
>gi|40217443|emb|CAE46376.1| proteasome, alpha subunit [uncultured archaeon]
gi|268323826|emb|CBH37414.1| proteasome alpha subunit [uncultured archaeon]
Length = 245
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L+ + +TS+LL+ S EK
Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAQDGVALLVDKRLTSRLLEGG-SVEK 65
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++++D H+ A +G+++DA +LI+ R++++ Y EPI
Sbjct: 66 IFRLDTHIGAATSGLVADARMLIDRGRIESQINKVVYDEPI 106
>gi|52548649|gb|AAU82498.1| multicatalytic endopeptidase complex subunit alpha [uncultured
archaeon GZfos18B6]
Length = 245
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L+ + +TS+LL+ S EK
Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAQDGVALLVDKRLTSRLLEGG-SVEK 65
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++++D H+ A +G+++DA +LI+ R++++ Y EPI
Sbjct: 66 IFRLDTHIGAATSGLVADARMLIDRGRIESQINKVVYDEPI 106
>gi|444724743|gb|ELW65341.1| Proteasome subunit alpha type-5 [Tupaia chinensis]
Length = 254
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 19/92 (20%)
Query: 12 FSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEKMYKIDDH 53
FSPEGRL+QV+Y +G CL E +TS L++ S S EK+ +ID H
Sbjct: 28 FSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIEKIVEIDAH 86
Query: 54 VACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ CA++G+++DA LI+ ARV+ + + + Y E
Sbjct: 87 IGCAMSGLIADAKTLIDKARVETQNHWFTYNE 118
>gi|254572531|ref|XP_002493375.1| Alpha 5 subunit of the 20S proteasome involved in
ubiquitin-dependent catabolism [Komagataella pastoris
GS115]
gi|238033173|emb|CAY71196.1| Alpha 5 subunit of the 20S proteasome involved in
ubiquitin-dependent catabolism [Komagataella pastoris
GS115]
gi|328352610|emb|CCA39008.1| 20S proteasome subunit alpha 5 [Komagataella pastoris CBS 7435]
Length = 255
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR + FSPEGRL+QV+Y G ++G E V+S +L++S S EK
Sbjct: 8 YDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGICTSEGIVLGVEKRVSSPMLESS-SIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ ++D H+ CA++G+ +DA +I+ ARV + + Y EP+
Sbjct: 67 IVEVDRHIGCAMSGLTADARSMIDHARVSSLTHDLYYDEPV 107
>gi|52549700|gb|AAU83549.1| multicatalytic endopeptidase complex subunit alpha [uncultured
archaeon GZfos30H9]
Length = 241
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L+ + +TS+LL+ S EK
Sbjct: 3 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAQDGVALLVDKRLTSRLLEGG-SVEK 61
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++++D H+ A +G+++DA +LI+ R++++ Y EPI
Sbjct: 62 IFRLDTHIGAATSGLVADARMLIDRGRIESQINKVVYDEPI 102
>gi|357517981|ref|XP_003629279.1| Proteasome subunit alpha type [Medicago truncatula]
gi|355523301|gb|AET03755.1| Proteasome subunit alpha type [Medicago truncatula]
gi|388490812|gb|AFK33472.1| unknown [Medicago truncatula]
Length = 249
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 17/100 (17%)
Query: 4 RYDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y ++G ++ LQ S S K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGIDNVVLGVEKKSTAKLQDSRSVRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
+ +DDH+A A AG+ +DA +LIN ARV+ + + ++P
Sbjct: 63 IVNLDDHIALACAGLKADARVLINRARVECQSHRLTVEDP 102
>gi|403416217|emb|CCM02917.1| predicted protein [Fibroporia radiculosa]
Length = 224
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 47/154 (30%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVGENN-------VTSK---LLQTSTS 43
MSR YDR TVFSP+G L+QV+Y C VG V K LQ +
Sbjct: 1 MSRSYDRALTVFSPDGHLFQVEYALEAVKKGTCAVGVRGKDVVVLGVEKKSVLQLQDPRT 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI---------------- 87
K+ +DDHV A AG+ +D +LI+ AR++ + + ++P+
Sbjct: 61 VRKVVMLDDHVCLAFAGLNADGRVLIDKARIECQSHRLTVEDPVTVEYITRHIAGVQQAN 120
Query: 88 --------------QDYKDDMTRQEAVQLALKVL 107
+++KDDM+R++ ++L +K L
Sbjct: 121 AIGRSSKTVREFLEKNHKDDMSREDTIKLTIKSL 154
>gi|289580198|ref|YP_003478664.1| Proteasome endopeptidase complex [Natrialba magadii ATCC 43099]
gi|448281437|ref|ZP_21472743.1| proteasome subunit alpha [Natrialba magadii ATCC 43099]
gi|289529751|gb|ADD04102.1| Proteasome endopeptidase complex [Natrialba magadii ATCC 43099]
gi|445578859|gb|ELY33259.1| proteasome subunit alpha [Natrialba magadii ATCC 43099]
Length = 280
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 54/101 (53%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM------------------GCLVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y L + S LL+ S S EK
Sbjct: 11 YDRGHTIFSPDGRLYQVEYAREAVERGSPSVGVVTDTGVVLAARKRLRSPLLE-SESIEK 69
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++++DDHVA A AG +DA L+ AR + +R+ Y EPI
Sbjct: 70 IHRVDDHVAVATAGHAADARQLVEMARKRCQRHRLRYAEPI 110
>gi|340713776|ref|XP_003395412.1| PREDICTED: proteasome subunit alpha type-5-like [Bombus terrestris]
gi|350409380|ref|XP_003488715.1| PREDICTED: proteasome subunit alpha type-5-like [Bombus impatiens]
Length = 269
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YD FSPEGRL+QV+Y +G LV E +TS L++ T+ EK
Sbjct: 8 YDHGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIATSEGVVLVVEKRITSSLME-PTTVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ +ID H+ CA +G+++D+ +I+ ARV+ + + + Y E
Sbjct: 67 IVEIDKHIGCAASGLIADSRTMIDRARVECQNHWFVYNE 105
>gi|288560613|ref|YP_003424099.1| proteasome alpha subunit [Methanobrevibacter ruminantium M1]
gi|288543323|gb|ADC47207.1| proteasome alpha subunit [Methanobrevibacter ruminantium M1]
Length = 294
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L+ + S+L++ + S EK
Sbjct: 11 YDRAITVFSPDGRLFQVEYAREAVKRGTTSLGLKSKDGVVLIVDKRTVSRLVE-AKSIEK 69
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++IDDH+ A +G+++DA L+ AR++++ Y EPI
Sbjct: 70 IFQIDDHIGVATSGLVADARALVERARIESQINKITYNEPI 110
>gi|12229936|sp|Q9SXU1.1|PSA7_CICAR RecName: Full=Proteasome subunit alpha type-7; AltName: Full=20S
proteasome alpha subunit D; AltName: Full=20S proteasome
subunit alpha-4
gi|4586592|dbj|BAA76428.1| multicatalytic endopeptidase complex [Cicer arietinum]
Length = 249
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y ++G ++ LQ + S K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDNVVLGVEKKSTAKLQDTRSVRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +DDH+A A AG+ +DA +LIN ARV+ + + ++P+
Sbjct: 63 IVNLDDHIALACAGLKADARVLINRARVECQSHRLTVEDPV 103
>gi|448412961|ref|ZP_21576852.1| proteasome subunit alpha [Halosimplex carlsbadense 2-9-1]
gi|445667663|gb|ELZ20304.1| proteasome subunit alpha [Halosimplex carlsbadense 2-9-1]
Length = 247
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T++FSP+GRLYQV+Y +G L + V S L++ S EK
Sbjct: 9 YDRGTSIFSPDGRLYQVEYAREAIKRGTASVGVRTADGVVLAADRQVRSPLVE-EQSIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++++DDH+A A AG ++DA L++ AR QA+ Y EPI
Sbjct: 68 LHRVDDHIAVASAGHVADARQLVDFAREQAQVNKLRYDEPI 108
>gi|328775859|ref|XP_624341.2| PREDICTED: proteasome subunit alpha type-5 [Apis mellifera]
Length = 269
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YD FSPEGRL+QV+Y +G LV E +TS L++ T+ EK
Sbjct: 8 YDHGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIATSEGVVLVVEKRITSSLME-PTTVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ +ID H+ CA +G+++D+ +I+ ARV+ + + + Y E
Sbjct: 67 IVEIDKHIGCAASGLIADSRTMIDRARVECQNHWFVYNE 105
>gi|2511580|emb|CAA73622.1| multicatalytic endopeptidase [Arabidopsis thaliana]
gi|2511582|emb|CAA73623.1| multicatalytic endopeptidase [Arabidopsis thaliana]
Length = 235
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDYMGCLVGENNV-----------------TSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y V + N ++ LQ S SA K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +D+H+A A AG+ +DA +LIN AR++ + + ++P+
Sbjct: 63 IVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPV 103
>gi|448369486|ref|ZP_21556038.1| proteasome subunit alpha [Natrialba aegyptia DSM 13077]
gi|445650661|gb|ELZ03577.1| proteasome subunit alpha [Natrialba aegyptia DSM 13077]
Length = 294
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGCLVGEN-------NVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G + E V S LL+ S EK
Sbjct: 10 YDRGHTIFSPDGRLYQVEYAREAVERGSPSVGVVTSEGVVLAARKRVRSPLLEPD-SVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++++DDH+A A AG +DA L++ AR + +++ Y EPI
Sbjct: 69 IHRVDDHLAVATAGHAADARQLVDAARKRCQQHRLQYGEPI 109
>gi|440301493|gb|ELP93879.1| proteasome subunit alpha type-5, putative [Entamoeba invadens IP1]
Length = 247
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 17/100 (17%)
Query: 6 DRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKMY 48
D FS EGRL+QV+Y G ++ S L S+S EK+
Sbjct: 9 DHGVNTFSSEGRLFQVEYATEAMKLGSTVVGIRTNEGVVIAVEKRISSPLMISSSIEKII 68
Query: 49 KIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+IDDH+ AV+G+ +DA LI+ AR++A+ + + Y EPI
Sbjct: 69 EIDDHIGAAVSGLTADARTLIDNARLEAQNHRFMYDEPIN 108
>gi|429328984|gb|AFZ80743.1| proteasome subunit alpha type, putative [Babesia equi]
Length = 253
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 21/104 (20%)
Query: 5 YDRQTTVFSPEGRLYQVDY-MGCL-----------------VGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G + E TS+LL+ S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYALGAMKLGSTALAIATKEGVIFASERRSTSQLLEF-VSLEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE--PIQ 88
+ +IDDHVAC ++G+++DA L++ AR + + + Y E PI+
Sbjct: 67 IMEIDDHVACTMSGLIADAKTLVDHARSECVNHTFVYNEKMPIK 110
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Query: 87 IQDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTM 146
+Q Y DDM+ QEA L L++LR+ M+ T +T + +E+A + + VKYR ++L
Sbjct: 184 LQRYHDDMSLQEAEILVLEILRQVMEDT-MTVKNIEMARITV---DDVKYREYDEQTLEQ 239
Query: 147 LLENFGVAQPASE 159
++ PA E
Sbjct: 240 IIAKL----PARE 248
>gi|76802504|ref|YP_327512.1| proteasome subunit alpha [Natronomonas pharaonis DSM 2160]
gi|121708068|sp|Q3IPJ1.1|PSA_NATPD RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|76558369|emb|CAI49960.1| proteasome alpha subunit [Natronomonas pharaonis DSM 2160]
Length = 255
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 57/101 (56%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G LV + + S L++ TS EK
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGIRTEDGVVLVVDKRIRSPLME-RTSVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K DDH+ A AG ++DA LI+ AR QA+ Y EPI
Sbjct: 69 IHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYDEPI 109
>gi|15239271|ref|NP_201415.1| proteasome subunit alpha type-7-B [Arabidopsis thaliana]
gi|12229893|sp|O24616.2|PSA7B_ARATH RecName: Full=Proteasome subunit alpha type-7-B; AltName: Full=20S
proteasome alpha subunit D-2; AltName: Full=Proteasome
component 6B; AltName: Full=Proteasome component 6C;
AltName: Full=Proteasome subunit alpha type-4
gi|3421082|gb|AAC32059.1| 20S proteasome subunit PAD2 [Arabidopsis thaliana]
gi|10177129|dbj|BAB10419.1| 20S proteasome subunit PAD2 [Arabidopsis thaliana]
gi|332010781|gb|AED98164.1| proteasome subunit alpha type-7-B [Arabidopsis thaliana]
Length = 250
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDYMGCLVGENNV-----------------TSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y V + N ++ LQ S SA K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +D+H+A A AG+ +DA +LIN AR++ + + ++P+
Sbjct: 63 IVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPV 103
>gi|359843270|gb|AEV89770.1| proteasome zeta subunit, partial [Schistocerca gregaria]
Length = 110
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E +TS L++ T+ EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSPLME-PTTIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ ++D H+ CAV+G+M+D+ +++ AR++ + + + Y E
Sbjct: 67 IVEVDKHIGCAVSGLMADSRTMLDRARIECQNHWFIYNE 105
>gi|448321224|ref|ZP_21510704.1| proteasome subunit alpha [Natronococcus amylolyticus DSM 10524]
gi|445604084|gb|ELY58035.1| proteasome subunit alpha [Natronococcus amylolyticus DSM 10524]
Length = 252
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G L + V S LL+ S S EK
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRVPSPLLEDS-SVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K DDHV A AG ++DA LI+ AR QA+ Y EPI
Sbjct: 69 IHKADDHVGIASAGHVADARQLIDFARRQAQVNHLRYGEPI 109
>gi|6093782|sp|Q59565.1|PSA_METTE RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|1002689|gb|AAA93166.1| PsmA [Methanosarcina thermophila TM-1]
Length = 247
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 62/101 (61%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L+ + +TS+L++ + S EK
Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVE-AESIEK 65
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++IDDH+ A +G+++DA L++ ARV+A+ +Y E I
Sbjct: 66 IFQIDDHIGAATSGLVADARALVDRARVEAQVNRVSYDELI 106
>gi|358336680|dbj|GAA55137.1| 20S proteasome subunit alpha 3, partial [Clonorchis sinensis]
Length = 924
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 18/90 (20%)
Query: 16 GRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEKMYKIDDHVACA 57
GRLYQV+Y +G L E + LL + +EK+YKI+D +ACA
Sbjct: 692 GRLYQVEYAMEAVGHAGTCLGIVASDGIVLAAERRFINNLLDETAFSEKIYKINDDIACA 751
Query: 58 VAGIMSDANILINTARVQARRYAYAYQEPI 87
VAGI +DA +LIN R+ A+RY +YQEP+
Sbjct: 752 VAGITADATVLINEMRLIAQRYLLSYQEPM 781
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 88 QDYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTML 147
QDY T ++A++L LK L KTM + LTS+K+EL V GK R+ + + +
Sbjct: 853 QDYDPQCTTEQAIKLCLKSLHKTMTMSKLTSDKVELG-VLQRRGGKTYVRLINQSEVDAV 911
Query: 148 LENFGVAQP 156
+ +P
Sbjct: 912 IRQIETEEP 920
>gi|358060079|dbj|GAA94138.1| hypothetical protein E5Q_00786 [Mixia osmundae IAM 14324]
Length = 274
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 20/137 (14%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR + FSPEGRLYQV+Y G ++G L S+S EK+
Sbjct: 8 YDRGVSTFSPEGRLYQVEYAIEAIKLGSTTVGVQTAEGVVLGVEKRVQSSLLESSSIEKI 67
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALKVL 107
+ID H+ CA++G+ +DA ++ AR ++ +A+ + EPI K + Q LAL+
Sbjct: 68 MEIDSHLGCAMSGLTADARTMVEHARNTSQNHAFTFNEPI---KVESVTQAVCDLALRFG 124
Query: 108 RKTMDSTSLTSEKLELA 124
T D + S +A
Sbjct: 125 ESTADDEPMMSRPFGVA 141
>gi|297816388|ref|XP_002876077.1| multicatalytic endopeptidase [Arabidopsis lyrata subsp. lyrata]
gi|297321915|gb|EFH52336.1| multicatalytic endopeptidase [Arabidopsis lyrata subsp. lyrata]
Length = 251
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDYMGCLVGENNV-----------------TSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y V + N ++ LQ S SA K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +D+H+A A AG+ +DA +LIN AR++ + + ++P+
Sbjct: 63 IVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPV 103
>gi|298674555|ref|YP_003726305.1| proteasome endopeptidase complex subunit alpha [Methanohalobium
evestigatum Z-7303]
gi|298287543|gb|ADI73509.1| proteasome endopeptidase complex, alpha subunit [Methanohalobium
evestigatum Z-7303]
Length = 255
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYMG------------------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y L+ + +TS+L++ + S EK
Sbjct: 10 YDRAITVFSPDGRLFQVEYAREAVKRGTTAAGIKAKDGVVLLVDKRITSRLIE-AESIEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++ID H+ A +G+++DA L++ ARV+A+ ++ EPI
Sbjct: 69 IFQIDAHIGVATSGLVADARTLVDRARVEAQVNRVSFDEPI 109
>gi|15230435|ref|NP_190694.1| proteasome subunit alpha type-7-A [Arabidopsis thaliana]
gi|266839|sp|P30186.1|PSA7A_ARATH RecName: Full=Proteasome subunit alpha type-7-A; AltName: Full=20S
proteasome alpha subunit D-1; AltName: Full=Proteasome
component 6A; AltName: Full=Proteasome subunit alpha
type-4; AltName: Full=TAS-G64
gi|16445|emb|CAA47298.1| proteosome alpha subunit [Arabidopsis thaliana]
gi|3421080|gb|AAC32058.1| 20S proteasome subunit PAD1 [Arabidopsis thaliana]
gi|6562278|emb|CAB62648.1| multicatalytic endopeptidase complex [Arabidopsis thaliana]
gi|14596065|gb|AAK68760.1| multicatalytic endopeptidase complex [Arabidopsis thaliana]
gi|15450441|gb|AAK96514.1| AT3g51260/F24M12_300 [Arabidopsis thaliana]
gi|16974445|gb|AAL31226.1| AT3g51260/F24M12_300 [Arabidopsis thaliana]
gi|20148239|gb|AAM10010.1| multicatalytic endopeptidase complex [Arabidopsis thaliana]
gi|332645248|gb|AEE78769.1| proteasome subunit alpha type-7-A [Arabidopsis thaliana]
gi|742351|prf||2009376B proteasome:SUBUNIT=alpha
Length = 250
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDYMGCLVGENNV-----------------TSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y V + N ++ LQ S SA K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +D+H+A A AG+ +DA +LIN AR++ + + ++P+
Sbjct: 63 IVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPV 103
>gi|449495162|ref|XP_004159752.1| PREDICTED: proteasome subunit alpha type-7-like [Cucumis sativus]
Length = 211
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDY-----------MGC------LVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y +G ++G ++ LQ S S K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGSDTIVLGVEKKSTPKLQDSRSVRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +DDH+A A AG+ +DA +LIN ARV+ + + ++P+
Sbjct: 63 IVNLDDHIALACAGLKADARVLINRARVECQSHRLTVEDPV 103
>gi|449434142|ref|XP_004134855.1| PREDICTED: proteasome subunit alpha type-7-like [Cucumis sativus]
gi|449491326|ref|XP_004158862.1| PREDICTED: proteasome subunit alpha type-7-like [Cucumis sativus]
Length = 249
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 19/102 (18%)
Query: 4 RYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTSAE 45
RYDR TVFSP+G L+QV+Y VG E T KL Q S S
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKATPKL-QDSRSVR 61
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
K+ +DDH+A A AG+ +DA +LIN AR++ + + ++P+
Sbjct: 62 KIVNLDDHIALACAGLKADARVLINRARIECQSHRLTVEDPV 103
>gi|433639119|ref|YP_007284879.1| 20S proteasome subunit (alpha or beta) [Halovivax ruber XH-70]
gi|433290923|gb|AGB16746.1| 20S proteasome subunit (alpha or beta) [Halovivax ruber XH-70]
Length = 256
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 19/100 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGCLVGENNV-------TSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G V + V S LL+ + A K
Sbjct: 9 YDRGQTIFSPDGRLYQVEYAREAVERGSPAVGVRVADGVVLAARKRRASPLLEPDSVA-K 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
+++IDDH++ A AG +DA L++ ARV A+R+ Y EP
Sbjct: 68 LHRIDDHISIASAGHAADARQLVDRARVAAQRHRLQYGEP 107
>gi|82621184|gb|ABB86280.1| proteasome-like protein alpha subunit-like [Solanum tuberosum]
Length = 249
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDY-----------MGC------LVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y +G ++G ++ LQ S S K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYAMEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSVRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +DDH+A A AG+ +DA +L+N AR++ + + ++P+
Sbjct: 63 IVNLDDHIALACAGLKADARVLVNKARIECQSHRLTVEDPV 103
>gi|448318333|ref|ZP_21507859.1| proteasome subunit alpha [Natronococcus jeotgali DSM 18795]
gi|445599357|gb|ELY53392.1| proteasome subunit alpha [Natronococcus jeotgali DSM 18795]
Length = 253
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G L + V S LL+ S S EK
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTDDGVVLAVDKRVPSPLLEDS-SVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K DDHV A AG ++DA LI+ AR QA+ Y EPI
Sbjct: 69 IHKADDHVGIASAGHVADARQLIDFARRQAQVNQLRYGEPI 109
>gi|435846875|ref|YP_007309125.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Natronococcus occultus SP4]
gi|433673143|gb|AGB37335.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Natronococcus occultus SP4]
Length = 251
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G L + V S LL+ S S EK
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTNDGVVLAVDKRVPSPLLEDS-SVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K DDHV A AG ++DA LI+ AR QA+ Y EPI
Sbjct: 69 IHKADDHVGIASAGHVADARQLIDFARRQAQVNQLRYGEPI 109
>gi|147862790|emb|CAN78932.1| hypothetical protein VITISV_004441 [Vitis vinifera]
Length = 219
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDY-----------MGC------LVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y +G ++G ++ LQ S + K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTAKLQDSRTVRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +DDH+A A AG+ +DA +LIN AR++ + + ++P+
Sbjct: 63 IVNLDDHIALACAGLKADARVLINRARIECQSHRLTVEDPV 103
>gi|77999287|gb|ABB16990.1| proteasome-like protein alpha subunit [Solanum tuberosum]
Length = 249
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDY-----------MGC------LVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y +G ++G ++ LQ S S K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYAMEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSVRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +DDH+A A AG+ +DA +L+N AR++ + + ++P+
Sbjct: 63 IVNLDDHIALACAGLKADARVLVNKARIECQSHRLTVEDPV 103
>gi|380011435|ref|XP_003689811.1| PREDICTED: proteasome subunit alpha type-5-like [Apis florea]
Length = 242
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YD FSPEGRL+QV+Y +G LV E +TS L++ T+ E
Sbjct: 7 EYDHGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIATSEGVVLVVEKRITSSLME-PTTVE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ +ID H+ CA +G+++D+ +I+ ARV+ + + + Y E
Sbjct: 66 KIVEIDKHIGCAASGLIADSRTMIDRARVECQNHWFVYNE 105
>gi|350538237|ref|NP_001234333.1| proteasome subunit alpha type-7 [Solanum lycopersicum]
gi|3334299|sp|O24030.1|PSA7_SOLLC RecName: Full=Proteasome subunit alpha type-7; AltName: Full=20S
proteasome alpha subunit D; AltName: Full=20S proteasome
subunit alpha-4
gi|2315211|emb|CAA74725.1| proteasome alpha subunit [Solanum lycopersicum]
Length = 259
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDY-----------MGC------LVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y +G ++G ++ LQ S S K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYAMEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSVRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +DDH+A A AG+ +DA +L+N AR++ + + ++P+
Sbjct: 63 IVNLDDHIALACAGLKADARVLVNKARIECQSHRLTVEDPV 103
>gi|343172102|gb|AEL98755.1| proteasome subunit alpha type 7, partial [Silene latifolia]
Length = 248
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDY-----------MGC------LVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y +G ++G ++ LQ S S +K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDVVVLGVEKKSTAKLQDSRSVKK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +D+H+A A AG+ +DA +LIN ARV+ + + ++P+
Sbjct: 63 IVNLDNHIALACAGLKADARVLINKARVECQSHRLTLEDPV 103
>gi|452207153|ref|YP_007487275.1| proteasome alpha subunit [Natronomonas moolapensis 8.8.11]
gi|452083253|emb|CCQ36539.1| proteasome alpha subunit [Natronomonas moolapensis 8.8.11]
Length = 249
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 57/101 (56%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G LV + + S L++ TS EK
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGIRTDDGVVLVVDKRIRSPLME-RTSVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K DDH+ A AG ++DA LI+ AR QA+ Y EPI
Sbjct: 69 IHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYSEPI 109
>gi|343172104|gb|AEL98756.1| proteasome subunit alpha type 7, partial [Silene latifolia]
Length = 248
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDY-----------MGC------LVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y +G ++G ++ LQ S S +K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDVVVLGVEKKSTAKLQDSRSVKK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +D+H+A A AG+ +DA +LIN ARV+ + + ++P+
Sbjct: 63 IVNLDNHIALACAGLKADARVLINKARVECQSHRLTLEDPV 103
>gi|323337524|gb|EGA78770.1| Pre9p [Saccharomyces cerevisiae Vin13]
Length = 220
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 42/62 (67%)
Query: 26 CLVGENNVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
L E VTS LL+ TS EK+YK++D +A AVAG+ +DA ILINTAR+ A+ Y Y E
Sbjct: 7 VLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKTYNE 66
Query: 86 PI 87
I
Sbjct: 67 DI 68
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPS-GKVKYRICSPESLTML 147
DYKDDM +A++LALK L KT DS++LT ++LE A + + G+V +I P+ + +
Sbjct: 141 DYKDDMKVDDAIELALKTLSKTTDSSALTYDRLEFATIRKGANDGEVYQKIFKPQEIKDI 200
Query: 148 LENFGVAQ 155
L G+ +
Sbjct: 201 LVKTGITK 208
>gi|110667477|ref|YP_657288.1| proteasome subunit alpha [Haloquadratum walsbyi DSM 16790]
gi|385802916|ref|YP_005839316.1| proteasome subunit alpha [Haloquadratum walsbyi C23]
gi|121689860|sp|Q18K08.1|PSA_HALWD RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|109625224|emb|CAJ51644.1| proteasome alpha subunit [Haloquadratum walsbyi DSM 16790]
gi|339728408|emb|CCC39557.1| proteasome alpha subunit [Haloquadratum walsbyi C23]
Length = 250
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 53/100 (53%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T+FSP+GRLYQV+Y G ++ + + L TS EK+
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGIRTPDGIVLAADKRSRSPLMEPTSVEKI 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+K DDHV A AG ++DA LI+ AR QA+ Y EP+
Sbjct: 70 HKTDDHVGIASAGHVADARQLIDFARRQAQVNRLRYGEPV 109
>gi|448397979|ref|ZP_21569917.1| proteasome subunit alpha [Haloterrigena limicola JCM 13563]
gi|445672195|gb|ELZ24772.1| proteasome subunit alpha [Haloterrigena limicola JCM 13563]
Length = 252
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G L + V S LL+ S S EK
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTNDGVVLAVDKRVPSPLLEDS-SVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K DDHV A AG ++DA LI+ AR QA+ Y EPI
Sbjct: 69 IHKADDHVGIASAGHVADARQLIDFARRQAQVNQLRYGEPI 109
>gi|448377613|ref|ZP_21560309.1| proteasome subunit alpha [Halovivax asiaticus JCM 14624]
gi|445655557|gb|ELZ08402.1| proteasome subunit alpha [Halovivax asiaticus JCM 14624]
Length = 256
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 17/99 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T+FSP+GRLYQV+Y G ++ + L + S K+
Sbjct: 9 YDRGQTIFSPDGRLYQVEYAREAVERGSPAVGVRAADGVVLAARKRRASPLLEADSVAKL 68
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
++IDDH+A A AG +DA L++ ARV A+R+ Y EP
Sbjct: 69 HRIDDHIAIASAGHAADARQLVDRARVAAQRHRLRYGEP 107
>gi|322371731|ref|ZP_08046274.1| proteasome subunit alpha [Haladaptatus paucihalophilus DX253]
gi|320548616|gb|EFW90287.1| proteasome subunit alpha [Haladaptatus paucihalophilus DX253]
Length = 252
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 53/100 (53%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T+FSP+GRLYQV+Y G ++ + T L TS EK+
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGSASIGVRTEGGVVLAVDKHTRSPLMEQTSVEKL 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+K DDH+ A AG ++DA LI+ AR Q++ Y EPI
Sbjct: 70 HKADDHIGIASAGHVADARQLIDFARRQSQINRLRYGEPI 109
>gi|79314743|ref|NP_001030838.1| proteasome subunit alpha type-7-A [Arabidopsis thaliana]
gi|332645249|gb|AEE78770.1| proteasome subunit alpha type-7-A [Arabidopsis thaliana]
Length = 243
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDYMGCLVGENNV-----------------TSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y V + N ++ LQ S SA K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +D+H+A A AG+ +DA +LIN AR++ + + ++P+
Sbjct: 63 IVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPV 103
>gi|21593040|gb|AAM64989.1| multicatalytic endopeptidase complex alpha chain [Arabidopsis
thaliana]
Length = 250
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 19/102 (18%)
Query: 4 RYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTSTSAE 45
RYDR TVFSP+G L+QV+Y VG E T KL Q S SA
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEALRKGNAAVGVRGTDTVVLAVEKKSTPKL-QDSRSAR 61
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
K+ +D+H+A A AG+ +DA +LIN AR++ + + ++P+
Sbjct: 62 KIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPV 103
>gi|448378130|ref|ZP_21560676.1| proteasome subunit alpha [Halovivax asiaticus JCM 14624]
gi|445654364|gb|ELZ07216.1| proteasome subunit alpha [Halovivax asiaticus JCM 14624]
Length = 252
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G L + + S LL+ S S EK
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGIRTSDGVVLAVDKRIPSPLLEDS-SVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K DDHV A AG ++DA LI+ AR QA+ Y EPI
Sbjct: 69 IHKADDHVGIASAGHVADARQLIDFARRQAQVNQLRYGEPI 109
>gi|328874689|gb|EGG23054.1| proteasome subunit alpha type 5 [Dictyostelium fasciculatum]
Length = 245
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------MGC-----LVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y + C LV E +TS LL+ S S +K
Sbjct: 8 YDRGVNTFSPEGRLFQVEYALEAIKLGSTSIGIQCEEGVVLVVEKRLTSTLLEPS-SIQK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID H+ CA++G+ +D+ +I+ AR++ + + + Y EP+
Sbjct: 67 VVEIDYHLICAMSGLTADSRTIIDHARIETQNHRFNYDEPM 107
>gi|194466249|gb|ACF74355.1| multicatalytic endopeptidase [Arachis hypogaea]
Length = 137
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y ++G ++ LQ S + K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDNVVLGVEKKSTAKLQDSRTVRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +DDH+A A AG+ +DA +LIN ARV+ + + ++P+
Sbjct: 63 IVNLDDHIALACAGLKADARVLINRARVECQSHRLTVEDPV 103
>gi|433638748|ref|YP_007284508.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Halovivax ruber XH-70]
gi|433290552|gb|AGB16375.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Halovivax ruber XH-70]
Length = 252
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G L + + S LL+ S S EK
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGIRTSDGVVLAVDKRIPSPLLEDS-SVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K DDHV A AG ++DA LI+ AR QA+ Y EPI
Sbjct: 69 IHKADDHVGIASAGHVADARQLIDFARRQAQVNQLRYGEPI 109
>gi|383859405|ref|XP_003705185.1| PREDICTED: proteasome subunit alpha type-5-like [Megachile
rotundata]
Length = 269
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YD FSPEGRL+QV+Y +G LV E +TS L++ +T EK
Sbjct: 8 YDHGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIATSEGVVLVVEKRITSALMEPTT-LEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ +ID H+ CA +G+++D+ +I+ ARV+ + + + Y E
Sbjct: 67 IVEIDKHIGCAASGLIADSRTIIDRARVECQNHWFVYNE 105
>gi|159042303|ref|YP_001541555.1| proteasome subunit alpha [Caldivirga maquilingensis IC-167]
gi|157921138|gb|ABW02565.1| Proteasome endopeptidase complex [Caldivirga maquilingensis IC-167]
Length = 248
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 49/98 (50%), Gaps = 17/98 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYMGCLVGENNVTSKL-----------------LQTSTSAEKM 47
YDR T+FSPEG LYQV Y G V T L L S EK+
Sbjct: 9 YDRAITIFSPEGELYQVRYAGEAVKRGWATVGLKCSDGVVLAAEKRKLGPLIDLNSIEKV 68
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
Y ID H+ A AG++SDA ILI+ AR QA+ Y Y E
Sbjct: 69 YMIDTHIGAASAGLLSDARILIDYAREQAQVYRLLYDE 106
>gi|67469051|ref|XP_650517.1| proteasome alpha subunit [Entamoeba histolytica HM-1:IMSS]
gi|56467152|gb|EAL45131.1| proteasome alpha subunit, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449703605|gb|EMD44025.1| proteasome alpha subunit, putative [Entamoeba histolytica KU27]
Length = 239
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 20/98 (20%)
Query: 11 VFSPEGRLYQVDY-----------MGCLVGENNV-------TSKLLQTSTSAEKMYKIDD 52
+FSPEGRLYQV+Y +G L + + ++L+ S A+KMY++D+
Sbjct: 1 MFSPEGRLYQVEYAMEAISHSSSAIGILATDGILLAAKKKRVARLVDRSKGADKMYELDE 60
Query: 53 HVACAVAGIMSDANILINTAR--VQARRYAYAYQEPIQ 88
H+ACA AGI SD NIL++ R Q R+ Y + P++
Sbjct: 61 HIACAAAGITSDTNILVDYLRDVCQQHRFTYGEEIPVE 98
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEVFLLPSGKVKYRICSPESLTMLL 148
+YKDD+T +EA +LA+K+ K+++S+S+ KLE L K +++ +++LL
Sbjct: 168 EYKDDITLEEAKKLAVKIFSKSVESSSMVPSKLEFGIFKLDNQNKPSFKVMKDREVSVLL 227
Query: 149 ENFGVAQ 155
+ G+ Q
Sbjct: 228 KECGIEQ 234
>gi|156082632|ref|XP_001608800.1| proteasome alpha 5 subunit [Babesia bovis T2Bo]
gi|154796050|gb|EDO05232.1| proteasome alpha 5 subunit, putative [Babesia bovis]
Length = 250
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-MGCL-----------------VGENNVTSKLLQTSTSAEK 46
YDR FSPEGR++QV+Y +G + E+ V S L++ S S EK
Sbjct: 8 YDRGVNTFSPEGRIFQVEYALGAIKLGSTALAIATKEGVIFASEHRVNSPLME-SVSLEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID H+ C ++G+++DA LI+ R++ + + Y EP+
Sbjct: 67 IMEIDTHIGCTMSGLIADARTLIDHGRLECANHRFVYNEPL 107
>gi|432328762|ref|YP_007246906.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Aciduliprofundum sp. MAR08-339]
gi|432135471|gb|AGB04740.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Aciduliprofundum sp. MAR08-339]
Length = 245
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 28/124 (22%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L+ + + S+LL+ S EK
Sbjct: 8 YDRAITVFSPDGRLFQVEYARAAVKRGTTTVGLKFKDGVILMADKRIRSRLLEPK-SMEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI---------QDYKDDMTRQ 97
++ IDDH+ CA +G++ DA +L++ AR+ A+ Y E I DYK T+
Sbjct: 67 IFVIDDHIGCATSGLVGDARVLVDYARLVAQIERVTYGEGISVEHLVKRVSDYKQQYTQY 126
Query: 98 EAVQ 101
V+
Sbjct: 127 GGVR 130
>gi|344253923|gb|EGW10027.1| Sortilin [Cricetulus griseus]
Length = 1190
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 19/99 (19%)
Query: 7 RQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEKMY 48
R FSPEGRL+QV+Y +G CL E +TS L++ S S EK+
Sbjct: 1 RGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIEKIV 59
Query: 49 KIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ID H+ CA++G+++DA LI+ ARV+ + + + Y E +
Sbjct: 60 EIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETM 98
>gi|260805606|ref|XP_002597677.1| hypothetical protein BRAFLDRAFT_279789 [Branchiostoma floridae]
gi|229282944|gb|EEN53689.1| hypothetical protein BRAFLDRAFT_279789 [Branchiostoma floridae]
Length = 252
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 56/105 (53%), Gaps = 19/105 (18%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MS RYDR TVFSP+G L+QV+Y VG E +KL Q
Sbjct: 1 MSSRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKAIAKL-QDER 59
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ K+ +DDHVA A AG+ +DA ILIN ARV+ + + ++P+
Sbjct: 60 TVRKICLLDDHVAMAFAGLTADARILINRARVECQSHRLTVEDPV 104
>gi|217072970|gb|ACJ84845.1| unknown [Medicago truncatula]
Length = 174
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 17/100 (17%)
Query: 4 RYDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y ++G ++ LQ S S K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGIDNVVLGVEKKSTAKLQDSRSVRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
+ +DDH+A A AG+ +DA +LIN ARV+ + + ++P
Sbjct: 63 IVNLDDHIALACAGLKADARVLINRARVECQSHRLTVEDP 102
>gi|356502736|ref|XP_003520172.1| PREDICTED: proteasome subunit alpha type-7-like isoform 1 [Glycine
max]
gi|356502738|ref|XP_003520173.1| PREDICTED: proteasome subunit alpha type-7-like isoform 2 [Glycine
max]
Length = 249
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y ++G ++ LQ S S K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDNVVLGVEKKSTAKLQDSRSVRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +D+H+A A AG+ +DA +LIN ARV+ + + ++P+
Sbjct: 63 IVNLDNHIALACAGLKADARVLINRARVECQSHRLTVEDPV 103
>gi|21228722|ref|NP_634644.1| proteasome subunit alpha [Methanosarcina mazei Go1]
gi|452211127|ref|YP_007491241.1| Proteasome subunit alpha,archaeal [Methanosarcina mazei Tuc01]
gi|23821980|sp|Q8PTU1.1|PSA_METMA RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|20907231|gb|AAM32316.1| Proteasome, subunit-alpha [Methanosarcina mazei Go1]
gi|452101029|gb|AGF97969.1| Proteasome subunit alpha,archaeal [Methanosarcina mazei Tuc01]
Length = 249
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 62/101 (61%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L+ + +TS+L++ + S EK
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVE-AESIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++IDDH+ A +G+++DA L++ ARV+A+ +Y E I
Sbjct: 68 IFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELI 108
>gi|213409301|ref|XP_002175421.1| 20S proteasome component alpha 4 [Schizosaccharomyces japonicus
yFS275]
gi|212003468|gb|EEB09128.1| 20S proteasome component alpha 4 [Schizosaccharomyces japonicus
yFS275]
Length = 258
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG------CLVGENNVTSKLLQTSTSAEKM 47
YDR +VFSP+GRL QV+Y +G ++G T+ LQ S S++K+
Sbjct: 4 YDRALSVFSPDGRLLQVEYGQEAVRRGTTAVGVRGERVAVIGVEKKTAAKLQNSRSSQKI 63
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+DDHV A AG+ +DA +LI+ ARV+A+ Y +P+
Sbjct: 64 GLVDDHVCLAFAGLNADARVLIDKARVEAQSYRLNLADPV 103
>gi|410076586|ref|XP_003955875.1| hypothetical protein KAFR_0B04440 [Kazachstania africana CBS 2517]
gi|372462458|emb|CCF56740.1| hypothetical protein KAFR_0B04440 [Kazachstania africana CBS 2517]
Length = 260
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 62/119 (52%), Gaps = 22/119 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR + FSPEGRL+QV+Y G ++G E TS LL+ S S EK
Sbjct: 8 YDRGVSTFSPEGRLFQVEYSLEAIKLGSTAVGICTSEGVVLGVEKRATSPLLE-SDSIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
+ +ID HV CA++G+ +DA +I ARV A + Y E D K + Q LAL+
Sbjct: 67 IVEIDRHVGCAMSGLTADARSMIEHARVAAVSHNLYYDE---DIKIESLTQSVCDLALR 122
>gi|225428005|ref|XP_002278162.1| PREDICTED: proteasome subunit alpha type-7 [Vitis vinifera]
gi|297744621|emb|CBI37883.3| unnamed protein product [Vitis vinifera]
Length = 249
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDY-----------MGC------LVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y +G ++G ++ LQ S + K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTAKLQDSRTVRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +DDH+A A AG+ +DA +LIN AR++ + + ++P+
Sbjct: 63 IVNLDDHIALACAGLKADARVLINRARIECQSHRLTVEDPV 103
>gi|256085175|ref|XP_002578798.1| proteasome subunit alpha 7 (T01 family) [Schistosoma mansoni]
gi|350645133|emb|CCD60194.1| proteasome subunit alpha 7 (T01 family) [Schistosoma mansoni]
Length = 264
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 59/105 (56%), Gaps = 19/105 (18%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-----CLV--GENNVTSKLLQTST 42
MS +YDR T+FSP+G L+QV+Y +G C+V E T+KL Q
Sbjct: 1 MSTKYDRAITIFSPDGHLFQVEYAQEAVKKGSTAIGVRGKDCVVLCVEKKATTKL-QNDR 59
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ K+ +DDHVA A AG+ +DA ILI+ RV+ + Y ++P+
Sbjct: 60 TVRKIALLDDHVAVAFAGLTADARILISRIRVECKSYKLTVEDPV 104
>gi|154343830|ref|XP_001567859.1| putative proteasome alpha 5 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065193|emb|CAM40619.1| putative proteasome alpha 5 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 244
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGR++Q++Y +G L E V S L+ S+S K
Sbjct: 8 YDRGVNTFSPEGRIFQIEYAVEAIKLGSTSLGIRTPEGVVLAAEKRVPSNLV-ISSSMSK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID H+A ++G+++DA IL+ ARV+++ + + Y EP+
Sbjct: 67 IMEIDSHIAAVMSGMVADARILVEHARVESQNHRFTYNEPMH 108
>gi|3641499|gb|AAC36462.1| proteosome component [Theileria parva]
Length = 158
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%)
Query: 27 LVGENNVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
LV + ++SKLL EK+YK+D H+ CAVAG+ +DAN+LIN ++ A+R+ Y+Y EP
Sbjct: 21 LVADKPISSKLLDPGKINEKLYKLDSHIFCAVAGLTADANVLINMCKLYAQRHRYSYGEP 80
>gi|448625033|ref|ZP_21670800.1| proteasome subunit alpha [Haloferax denitrificans ATCC 35960]
gi|445748795|gb|EMA00241.1| proteasome subunit alpha [Haloferax denitrificans ATCC 35960]
Length = 252
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T+FSP+GRLYQV+Y G ++ + + L TS EK+
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLMEPTSVEKI 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+K DDH+ A AG ++DA LI+ AR Q++ Y EPI
Sbjct: 70 HKADDHIGIASAGHVADARQLIDFARRQSQVNRLRYGEPI 109
>gi|448561679|ref|ZP_21634887.1| proteasome subunit alpha [Haloferax prahovense DSM 18310]
gi|448586268|ref|ZP_21648342.1| proteasome subunit alpha [Haloferax gibbonsii ATCC 33959]
gi|445720307|gb|ELZ71982.1| proteasome subunit alpha [Haloferax prahovense DSM 18310]
gi|445724923|gb|ELZ76549.1| proteasome subunit alpha [Haloferax gibbonsii ATCC 33959]
Length = 252
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T+FSP+GRLYQV+Y G ++ + + L TS EK+
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLMEPTSVEKI 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+K DDH+ A AG ++DA LI+ AR Q++ Y EPI
Sbjct: 70 HKADDHIGIASAGHVADARQLIDFARRQSQVNRLRYGEPI 109
>gi|448602650|ref|ZP_21656585.1| proteasome subunit alpha [Haloferax sulfurifontis ATCC BAA-897]
gi|445747002|gb|ELZ98459.1| proteasome subunit alpha [Haloferax sulfurifontis ATCC BAA-897]
Length = 252
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T+FSP+GRLYQV+Y G ++ + + L TS EK+
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLMEPTSVEKI 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+K DDH+ A AG ++DA LI+ AR Q++ Y EPI
Sbjct: 70 HKADDHIGIASAGHVADARQLIDFARRQSQVNRLRYGEPI 109
>gi|5833206|gb|AAD53404.1|AF126260_1 alpha-1 subunit of 20S proteasome [Haloferax volcanii DS2]
Length = 252
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T+FSP+GRLYQV+Y G ++ + + L TS EK+
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLMEPTSVEKI 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+K DDH+ A AG ++DA LI+ AR Q++ Y EPI
Sbjct: 70 HKADDHIGIASAGHVADARQLIDFARHQSQVNRLRYGEPI 109
>gi|428179644|gb|EKX48514.1| 20S proteasome subunit alpha type 7 [Guillardia theta CCMP2712]
Length = 252
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 17/104 (16%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM------GC-----------LVGENNVTSKLLQTSTS 43
MS RYDR TVFSP+G L+QV+Y G +VG ++ LQ +
Sbjct: 1 MSSRYDRAITVFSPDGHLFQVEYALEAVRRGTTAVAVKGDNIIVVGVEKKSTAKLQEPRT 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
K++ +DDHV A AG+ +DA +L+N RV+ + + ++P+
Sbjct: 61 VRKIHVLDDHVCLAFAGLTADARVLVNRTRVECQSFKLTMEDPV 104
>gi|292655249|ref|YP_003535146.1| proteasome subunit alpha [Haloferax volcanii DS2]
gi|448292194|ref|ZP_21482854.1| proteasome subunit alpha [Haloferax volcanii DS2]
gi|300669661|sp|Q9V2V6.2|PSA1_HALVD RecName: Full=Proteasome subunit alpha 1; AltName: Full=20S
proteasome alpha subunit 1; AltName: Full=Proteasome
core protein PsmA 1; Contains: RecName: Full=Proteasome
subunit alpha 1, N-terminally processed
gi|291372203|gb|ADE04430.1| proteasome alpha subunit [Haloferax volcanii DS2]
gi|445572994|gb|ELY27521.1| proteasome subunit alpha [Haloferax volcanii DS2]
Length = 252
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T+FSP+GRLYQV+Y G ++ + + L TS EK+
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLMEPTSVEKI 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+K DDH+ A AG ++DA LI+ AR Q++ Y EPI
Sbjct: 70 HKADDHIGIASAGHVADARQLIDFARRQSQVNRLRYGEPI 109
>gi|448541426|ref|ZP_21624201.1| proteasome subunit alpha [Haloferax sp. ATCC BAA-646]
gi|448549754|ref|ZP_21628359.1| proteasome subunit alpha [Haloferax sp. ATCC BAA-645]
gi|448555135|ref|ZP_21631175.1| proteasome subunit alpha [Haloferax sp. ATCC BAA-644]
gi|445708026|gb|ELZ59870.1| proteasome subunit alpha [Haloferax sp. ATCC BAA-646]
gi|445712802|gb|ELZ64583.1| proteasome subunit alpha [Haloferax sp. ATCC BAA-645]
gi|445717880|gb|ELZ69583.1| proteasome subunit alpha [Haloferax sp. ATCC BAA-644]
Length = 253
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T+FSP+GRLYQV+Y G ++ + + L TS EK+
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLMEPTSVEKI 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+K DDH+ A AG ++DA LI+ AR Q++ Y EPI
Sbjct: 70 HKADDHIGIASAGHVADARQLIDFARRQSQVNRLRYGEPI 109
>gi|24651571|ref|NP_651843.1| proteasome alpha3T subunit [Drosophila melanogaster]
gi|12229947|sp|Q9VA12.1|PSA4L_DROME RecName: Full=Proteasome subunit alpha type-4-like
gi|7302012|gb|AAF57116.1| proteasome alpha3T subunit [Drosophila melanogaster]
Length = 251
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 17/104 (16%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTS 43
M+R +D +TT+FSPEGRLYQV+Y G L+ KL+ TS
Sbjct: 1 MARFFDSRTTIFSPEGRLYQVEYAMEAASQSGTCVGLLAKNGVLLATERSVDKLMDTSIP 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++ +++++AC G +D N+L+N R+ A++Y + + E I
Sbjct: 61 VPRISWLNENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMI 104
>gi|189182100|gb|ACD81826.1| IP21535p [Drosophila melanogaster]
Length = 262
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 17/104 (16%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTS 43
M+R +D +TT+FSPEGRLYQV+Y G L+ KL+ TS
Sbjct: 12 MARFFDSRTTIFSPEGRLYQVEYAMEAASQSGTCVGLLAKNGVLLATERSVDKLMDTSIP 71
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++ +++++AC G +D N+L+N R+ A++Y + + E I
Sbjct: 72 VPRISWLNENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMI 115
>gi|433434337|ref|ZP_20407995.1| proteasome subunit alpha [Haloferax sp. BAB2207]
gi|448571755|ref|ZP_21639929.1| proteasome subunit alpha [Haloferax lucentense DSM 14919]
gi|448596663|ref|ZP_21653801.1| proteasome subunit alpha [Haloferax alexandrinus JCM 10717]
gi|432192764|gb|ELK49590.1| proteasome subunit alpha [Haloferax sp. BAB2207]
gi|445721722|gb|ELZ73388.1| proteasome subunit alpha [Haloferax lucentense DSM 14919]
gi|445740544|gb|ELZ92049.1| proteasome subunit alpha [Haloferax alexandrinus JCM 10717]
Length = 253
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T+FSP+GRLYQV+Y G ++ + + L TS EK+
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLMEPTSVEKI 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+K DDH+ A AG ++DA LI+ AR Q++ Y EPI
Sbjct: 70 HKADDHIGIASAGHVADARQLIDFARRQSQVNRLRYGEPI 109
>gi|328856517|gb|EGG05638.1| hypothetical protein MELLADRAFT_43834 [Melampsora larici-populina
98AG31]
Length = 265
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 17/104 (16%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVGENNVTSKLL----------QTSTS 43
MSR YDR TVFSP+G L+QV+Y C VG + +L Q +
Sbjct: 1 MSRSYDRALTVFSPDGHLFQVEYAVEAVQKGTCAVGVRGKSCAILGVEKKSVLQLQDPRT 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
K+ +DDHV A AG+ +DA ILI+ ARV+ + + ++P+
Sbjct: 61 VRKVAMLDDHVCLAFAGLTADARILIDKARVECQSHRLNVEDPV 104
>gi|225431090|ref|XP_002264052.1| PREDICTED: proteasome subunit alpha type-7 [Vitis vinifera]
gi|297734987|emb|CBI17349.3| unnamed protein product [Vitis vinifera]
Length = 249
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDY-----------MGC------LVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y +G ++G ++ LQ S + K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTAKLQDSRTVRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +DDH+A A AG+ +DA +LIN AR++ + + ++P+
Sbjct: 63 IVNLDDHIALACAGLKADARVLINRARIECQSHRLTVEDPV 103
>gi|403220942|dbj|BAM39075.1| proteasome subunit alpha type 5-2 [Theileria orientalis strain
Shintoku]
Length = 273
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY-MGCL-----------------VGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G + E TS LL+ S EK
Sbjct: 31 YDRGVNTFSPEGRLFQVEYALGAMKLGSTAIAVSTKDGVIFASERRATSPLLEF-VSLEK 89
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ +ID+H+ACA++G+++DA L++ AR + + + Y E
Sbjct: 90 IMEIDNHIACAMSGLIADAKTLVDHARSECVNHTFVYNE 128
>gi|448575121|ref|ZP_21641644.1| proteasome subunit alpha [Haloferax larsenii JCM 13917]
gi|445732800|gb|ELZ84382.1| proteasome subunit alpha [Haloferax larsenii JCM 13917]
Length = 258
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T+FSP+GRLYQV+Y G ++ + + L TS EK+
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLMEPTSVEKI 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+K DDH+ A AG ++DA LI+ AR Q++ Y EPI
Sbjct: 70 HKADDHIGIASAGHVADARQLIDFARRQSQVNRLRYGEPI 109
>gi|448590643|ref|ZP_21650408.1| proteasome subunit alpha [Haloferax elongans ATCC BAA-1513]
gi|445734139|gb|ELZ85698.1| proteasome subunit alpha [Haloferax elongans ATCC BAA-1513]
Length = 259
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T+FSP+GRLYQV+Y G ++ + + L TS EK+
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLMEPTSVEKI 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+K DDH+ A AG ++DA LI+ AR Q++ Y EPI
Sbjct: 70 HKADDHIGIASAGHVADARQLIDFARRQSQVNRLRYGEPI 109
>gi|332372913|gb|AEE61598.1| unknown [Dendroctonus ponderosae]
Length = 257
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 19/100 (19%)
Query: 4 RYDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAE 45
YDR FSPEGRL+QV+Y +G L E +TS L++ T+ E
Sbjct: 7 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGISTNQGVVLAVEKRITSNLME-PTTIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
K+ ++D H+ CAV+G+++D+ +I AR++ + + + Y E
Sbjct: 66 KIVEVDKHIGCAVSGLIADSRTMIERARMECQNHWFVYNE 105
>gi|448613076|ref|ZP_21662956.1| proteasome subunit alpha [Haloferax mucosum ATCC BAA-1512]
gi|445739973|gb|ELZ91479.1| proteasome subunit alpha [Haloferax mucosum ATCC BAA-1512]
Length = 254
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T+FSP+GRLYQV+Y G ++ + + L TS EK+
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLMEPTSVEKI 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+K DDH+ A AG ++DA LI+ AR Q++ Y EPI
Sbjct: 70 HKADDHIGIASAGHVADARQLIDFARRQSQVNRLRYGEPI 109
>gi|50302577|ref|XP_451224.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640355|emb|CAH02812.1| KLLA0A05093p [Kluyveromyces lactis]
Length = 262
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR + FSPEGRL+QV+Y G ++G E VTS LL+ S S EK
Sbjct: 8 YDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGVVTNEGIVLGVEKRVTSALLE-SDSIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ ++D H+ CA++G+ +DA ++ ARV A + Y E I
Sbjct: 67 IVEVDTHIGCAMSGLTADARSMLEHARVNAVTHDLYYDEKI 107
>gi|448714782|ref|ZP_21702213.1| proteasome subunit alpha [Halobiforma nitratireducens JCM 10879]
gi|445788427|gb|EMA39141.1| proteasome subunit alpha [Halobiforma nitratireducens JCM 10879]
Length = 251
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G L + V S LL+ S S EK
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTQDGVVLAVDKRVPSPLLEDS-SVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K DDHV A AG ++DA LI+ AR QA+ Y +PI
Sbjct: 69 IHKADDHVGIASAGHVADARQLIDFARRQAQVNQLRYGQPI 109
>gi|429193526|ref|YP_007179204.1| proteasome endopeptidase complex subunit alpha [Natronobacterium
gregoryi SP2]
gi|448323924|ref|ZP_21513367.1| proteasome subunit alpha [Natronobacterium gregoryi SP2]
gi|429137744|gb|AFZ74755.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Natronobacterium gregoryi SP2]
gi|445619926|gb|ELY73437.1| proteasome subunit alpha [Natronobacterium gregoryi SP2]
Length = 253
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G L + V S LL+ S S EK
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTQDGVVLAVDKRVPSPLLEDS-SVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K DDHV A AG ++DA LI+ AR QA+ Y +PI
Sbjct: 69 LHKADDHVGIASAGHVADARQLIDFARRQAQVNQLRYGQPI 109
>gi|168012536|ref|XP_001758958.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690095|gb|EDQ76464.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 237
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 22/119 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGCLVGENN-------VTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E VTS LL+T S EK
Sbjct: 9 YDRGVNTFSPEGRLFQVEYAIEASKLGSTAIGLLTREGVILAVEKVVTSPLLETK-SIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
+ IDD + CA++G+ +DA L+ RV+ + + ++Y E + + T Q LALK
Sbjct: 68 IVMIDDCIGCAMSGLTADARTLMEHGRVETQNHRFSYNEAM---SVESTTQALCNLALK 123
>gi|84998956|ref|XP_954199.1| proteasome subunit alpha type 5-2 [Theileria annulata]
gi|65305197|emb|CAI73522.1| proteasome subunit alpha type 5-2, putative [Theileria annulata]
Length = 254
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY-MGCL-----------------VGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G + E S LL+ S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYALGAMKLGSTAIAVATKEGVIFASERRSNSPLLEF-VSLEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ +IDDH+ACA++G+++DA L++ AR + + + Y E
Sbjct: 67 IMEIDDHIACAMSGLIADAKTLVDHARSECVNHTFVYNE 105
>gi|126649191|ref|XP_001388268.1| proteasome subunit alpha type 5 [Cryptosporidium parvum Iowa II]
gi|126117190|gb|EAZ51290.1| proteasome subunit alpha type 5 [Cryptosporidium parvum Iowa II]
Length = 255
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E ++S LL+ + EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIAAIKLGSTAVGIKTKEGVILASEKRISSPLLEPR-NLEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ ID HV C ++G+++DA +I+ ARV+++ Y + Y E I
Sbjct: 67 IMIIDRHVGCCMSGLVADAKTMIDHARVESQNYFFTYNENI 107
>gi|330804711|ref|XP_003290335.1| proteasome subunit alpha type 5 [Dictyostelium purpureum]
gi|325079545|gb|EGC33140.1| proteasome subunit alpha type 5 [Dictyostelium purpureum]
Length = 242
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 16/98 (16%)
Query: 5 YDRQTTVFSPEGRLYQVDY----------MGCLVG-----ENNVTSKLLQTSTSAEKMYK 49
YDR FSPEGRL+QV+Y + C G E +TS LL+ S S +K+ +
Sbjct: 8 YDRGVNTFSPEGRLFQVEYALEAIKLGIGVQCEEGVVLAVEKRLTSPLLEPS-SIQKVVE 66
Query: 50 IDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
ID H+ CA++G+ +D+ +I+ AR++ + + + Y EP+
Sbjct: 67 IDYHLICALSGLTADSRTIIDHARIETQNHRFNYDEPM 104
>gi|15897639|ref|NP_342244.1| proteasome subunit alpha [Sulfolobus solfataricus P2]
gi|284174965|ref|ZP_06388934.1| proteasome subunit alpha [Sulfolobus solfataricus 98/2]
gi|384434254|ref|YP_005643612.1| proteasome endopeptidase complex subunit alpha [Sulfolobus
solfataricus 98/2]
gi|12229942|sp|Q9UXC6.1|PSA_SULSO RecName: Full=Proteasome subunit alpha; AltName: Full=20S
proteasome alpha subunit; AltName: Full=Proteasome core
protein PsmA
gi|6015738|emb|CAB57565.1| proteasome alpha subunit (N-terminus) [Sulfolobus solfataricus P2]
gi|13813906|gb|AAK41034.1| Proteasome subunit [Sulfolobus solfataricus P2]
gi|261602408|gb|ACX92011.1| proteasome endopeptidase complex, alpha subunit [Sulfolobus
solfataricus 98/2]
Length = 241
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 18/104 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T+FSP+G LYQVDY ++ ++ L S EK+
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSSVVIASEKRKAQSLLDVDSIEKV 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ-DY 90
+ IDDHV C+ AG+ SD +LI+ AR A ++ Y EP+ DY
Sbjct: 70 FLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDY 113
>gi|345497874|ref|XP_001607430.2| PREDICTED: proteasome subunit alpha type-5-like [Nasonia
vitripennis]
Length = 269
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR FSPEGRL+QV+Y G ++ T+ L T EK+
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGWTAIGICTSEGVILAVEKRTTSFLMEPTMVEKI 67
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
++D H+ C +G+M+D+ +I+ ARV+ + + + Y E
Sbjct: 68 VEVDKHIGCVSSGLMADSRTMIDRARVECQNHWFTYNE 105
>gi|262401167|gb|ACY66486.1| 20S proteasome alpha subunit [Scylla paramamosain]
Length = 103
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 19/97 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGCLVGEN-------NVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G GE +TS L+ ST EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTGEGVVLAVEKRITSPLMIPST-IEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAY 83
+ +ID H+ CAV+G+++D+ L++ ARV+ + + Y
Sbjct: 67 IVQIDKHIGCAVSGLVADSRTLVDHARVECANHWFVY 103
>gi|363752968|ref|XP_003646700.1| hypothetical protein Ecym_5100 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890336|gb|AET39883.1| hypothetical protein Ecym_5100 [Eremothecium cymbalariae
DBVPG#7215]
Length = 261
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR + FSPEGRL+QV+Y G ++G E VTS LL+ S S EK
Sbjct: 8 YDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGIATNEGVVLGVEKRVTSPLLE-SDSIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ ++D H+ CA++G+ +DA +I AR+ + + Y E I
Sbjct: 67 IVEVDKHIGCAMSGLTADARSMIEHARISSVTHNLYYDEEI 107
>gi|71032913|ref|XP_766098.1| proteasome subunit alpha type 5 [Theileria parva strain Muguga]
gi|68353055|gb|EAN33815.1| proteasome subunit alpha type 5, putative [Theileria parva]
Length = 254
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY-MGCL-----------------VGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G + E S LL+ S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYALGAMKLGSTAIAVATKEGVIFASERRSNSPLLEF-VSLEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ +IDDH+ACA++G+++DA L++ AR + + + Y E
Sbjct: 67 IMEIDDHIACAMSGLIADAKTLVDHARSECVNHTFVYNE 105
>gi|289582959|ref|YP_003481425.1| proteasome endopeptidase complex subunit alpha [Natrialba magadii
ATCC 43099]
gi|448283579|ref|ZP_21474852.1| proteasome subunit alpha [Natrialba magadii ATCC 43099]
gi|289532512|gb|ADD06863.1| proteasome endopeptidase complex, alpha subunit [Natrialba magadii
ATCC 43099]
gi|445573691|gb|ELY28210.1| proteasome subunit alpha [Natrialba magadii ATCC 43099]
Length = 251
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G L + V S LL+ S S EK
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTDDGVVLAVDKRVPSPLLEDS-SVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K DDH+ A AG ++DA LI+ AR Q++ Y EPI
Sbjct: 69 IHKADDHIGIASAGHVADARQLIDFARRQSQVNQLRYGEPI 109
>gi|170049221|ref|XP_001854661.1| proteasome subunit alpha type [Culex quinquefasciatus]
gi|167871080|gb|EDS34463.1| proteasome subunit alpha type [Culex quinquefasciatus]
Length = 276
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G + E +TS L++ T EK
Sbjct: 42 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTQEGVVMAVEKRITSPLME-PTKVEK 100
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ ++D H+ CA +G+M+D+ L++ ARV+ + + + Y E
Sbjct: 101 IVEVDRHIGCATSGLMADSRTLLDRARVECQNHWFVYNE 139
>gi|448352854|ref|ZP_21541635.1| proteasome subunit alpha [Natrialba hulunbeirensis JCM 10989]
gi|445642133|gb|ELY95204.1| proteasome subunit alpha [Natrialba hulunbeirensis JCM 10989]
Length = 273
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYMG----------CLVGENNVT--------SKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +V +N + S LL+ S S K
Sbjct: 11 YDRGHTIFSPDGRLYQVEYAREAVERGSPSVGVVTDNGIVLAARKRLRSPLLE-SESIAK 69
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++++DDHVA A AG +DA L+ TAR + + + Y EPI
Sbjct: 70 IHRVDDHVAVATAGHAADARQLVETARKRCQHHRLRYAEPI 110
>gi|448355908|ref|ZP_21544657.1| proteasome subunit alpha [Natrialba hulunbeirensis JCM 10989]
gi|445634616|gb|ELY87795.1| proteasome subunit alpha [Natrialba hulunbeirensis JCM 10989]
Length = 251
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G L + V S LL+ S S EK
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTDDGVVLAVDKRVPSPLLEDS-SVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K DDH+ A AG ++DA LI+ AR Q++ Y EPI
Sbjct: 69 IHKADDHIGIASAGHVADARQLIDFARRQSQVNQLRYGEPI 109
>gi|313127016|ref|YP_004037286.1| proteasome subunit alpha [Halogeometricum borinquense DSM 11551]
gi|448288517|ref|ZP_21479715.1| proteasome subunit alpha [Halogeometricum borinquense DSM 11551]
gi|312293381|gb|ADQ67841.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Halogeometricum borinquense DSM 11551]
gi|445568902|gb|ELY23477.1| proteasome subunit alpha [Halogeometricum borinquense DSM 11551]
Length = 255
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T+FSP+GRLYQV+Y G ++ + + L TS EK+
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLMEPTSVEKI 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+K DDH+ A AG ++DA LI+ AR Q++ Y EPI
Sbjct: 70 HKSDDHIGIASAGHVADARQLIDFARRQSQVNRLRYGEPI 109
>gi|448358193|ref|ZP_21546878.1| proteasome subunit alpha [Natrialba chahannaoensis JCM 10990]
gi|445646764|gb|ELY99748.1| proteasome subunit alpha [Natrialba chahannaoensis JCM 10990]
Length = 251
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G L + V S LL+ S S EK
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTDDGVVLAVDKRVPSPLLEDS-SVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K DDH+ A AG ++DA LI+ AR Q++ Y EPI
Sbjct: 69 IHKADDHIGIASAGHVADARQLIDFARRQSQVNQLRYGEPI 109
>gi|389846563|ref|YP_006348802.1| proteasome subunit alpha [Haloferax mediterranei ATCC 33500]
gi|448615765|ref|ZP_21664528.1| proteasome subunit alpha [Haloferax mediterranei ATCC 33500]
gi|388243869|gb|AFK18815.1| proteasome subunit alpha [Haloferax mediterranei ATCC 33500]
gi|445751896|gb|EMA03327.1| proteasome subunit alpha [Haloferax mediterranei ATCC 33500]
Length = 252
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T+FSP+GRLYQV+Y G ++ + + L TS EK+
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLMEPTSVEKI 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+K DDH+ A AG ++DA LI+ AR Q++ Y EPI
Sbjct: 70 HKSDDHIGIASAGHVADARQLIDFARRQSQVNRLRYGEPI 109
>gi|226481411|emb|CAX73603.1| 20S proteasome subunit alpha 8 [Schistosoma japonicum]
Length = 264
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 19/105 (18%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG-----CLV--GENNVTSKLLQTST 42
M+ +YDR T+FSP+G L+QV+Y +G C+V E T+KL Q
Sbjct: 1 MTTKYDRAITIFSPDGHLFQVEYAQEAVKKGSTAIGVRGKDCVVLCVEKKATTKL-QNDR 59
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ K+ +DDHVA A AG+ +DA ILI+ RV+ + Y ++P+
Sbjct: 60 TVRKIALLDDHVAVAFAGLTADARILISRIRVECKSYKLTVEDPV 104
>gi|24850286|gb|AAN63094.1| testis-specific 20S proteasome subunit alpha 3T [Drosophila
melanogaster]
Length = 251
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 17/104 (16%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTS 43
M+R +D +TT+FSPEGRLYQV+Y G L+ KL+ TS
Sbjct: 1 MARFFDSRTTIFSPEGRLYQVEYAMEAASQSGTCVGLLAKNGVLLATERSVDKLMDTSIP 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++ +++++AC G +D N+L+N R+ A++Y + + E I
Sbjct: 61 VPRISWLNENIACWPTGNTADGNVLVNQLRMIAQQYQFNFGEMI 104
>gi|397775148|ref|YP_006542694.1| proteasome endopeptidase complex, alpha subunit [Natrinema sp.
J7-2]
gi|448343949|ref|ZP_21532866.1| proteasome subunit alpha [Natrinema gari JCM 14663]
gi|397684241|gb|AFO58618.1| proteasome endopeptidase complex, alpha subunit [Natrinema sp.
J7-2]
gi|445622032|gb|ELY75497.1| proteasome subunit alpha [Natrinema gari JCM 14663]
Length = 256
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 55/101 (54%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G L + V S LL+ S S EK
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTNDGVVLAVDKRVPSPLLEDS-SVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K DDHV A AG ++DA LI+ AR Q + Y EPI
Sbjct: 69 IHKADDHVGIASAGHVADARQLIDFARRQTQVNQLRYGEPI 109
>gi|123439006|ref|XP_001310279.1| Family T1, proteasome alpha subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121892042|gb|EAX97349.1| Family T1, proteasome alpha subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 251
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG-------CLVG-----ENNVTSKLLQTSTSAEK 46
YDR FSP+GRL QV+Y +G C G E ++S+LL ++S EK
Sbjct: 8 YDRNVNTFSPDGRLLQVEYAIEAVKLGSSAVAILCPEGVIFAVEKRLSSQLL-IASSVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+Y IDDHV +AG+ +D ++ RV+A+ + +++ EPI
Sbjct: 67 VYAIDDHVGVVMAGLAADGRTMVEHMRVEAQNHRFSFDEPI 107
>gi|448729831|ref|ZP_21712143.1| proteasome subunit alpha [Halococcus saccharolyticus DSM 5350]
gi|445794152|gb|EMA44705.1| proteasome subunit alpha [Halococcus saccharolyticus DSM 5350]
Length = 249
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T+FSP+GRLYQV+Y G ++ + L+ +S EK+
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPDGVVLAVDKRFRSPLEERSSVEKI 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+K DDH+ A AG ++DA LI+ AR QA+ Y EPI
Sbjct: 70 HKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYGEPI 109
>gi|354611209|ref|ZP_09029165.1| Proteasome subunit alpha [Halobacterium sp. DL1]
gi|353196029|gb|EHB61531.1| Proteasome subunit alpha [Halobacterium sp. DL1]
Length = 266
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGCLVGEN-------NVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G E ++S L++ TS EK
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTPSIGVRTAEGVVLLVDKRISSDLME-ETSVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K DDH+ A AG ++DA LI+ AR A+ Y EPI
Sbjct: 69 IHKADDHIGIASAGHVADARQLIDFARRDAQVNRVRYDEPI 109
>gi|156937247|ref|YP_001435043.1| proteasome subunit alpha [Ignicoccus hospitalis KIN4/I]
gi|156566231|gb|ABU81636.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
Length = 239
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 17/99 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR TVFSPEG+LYQV+Y G +V + + L EK+
Sbjct: 11 YDRAITVFSPEGKLYQVEYAFEAVKRGWSTIGAKCKEGVVVAASKKKVQTLVDFDKLEKI 70
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
+ IDDH+ + AG+ +D +L++ AR A Y + Y EP
Sbjct: 71 HFIDDHIVTSFAGLAADGRVLVDVARRAALNYRFLYDEP 109
>gi|156844179|ref|XP_001645153.1| hypothetical protein Kpol_1062p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156115811|gb|EDO17295.1| hypothetical protein Kpol_1062p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 260
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR + FSPEGRL+QV+Y G ++G E TS LL+ S S EK
Sbjct: 8 YDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGITTREGVVLGVEKRATSPLLE-SDSIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID+H+ CA++G+ +DA +I AR A + Y E I
Sbjct: 67 IVEIDNHIGCAMSGLTADARSMIEHARTSAVTHNLYYDEDI 107
>gi|50289853|ref|XP_447358.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526668|emb|CAG60295.1| unnamed protein product [Candida glabrata]
Length = 260
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR + FSPEGRL+QV+Y G ++G E TS LL+ S S EK
Sbjct: 8 YDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGVVTSEGVVLGVEKRATSPLLE-SDSIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ +ID HV CA++G+ +DA ++ ARV A + Y E I+
Sbjct: 67 IVEIDRHVGCAMSGLTADARSMLEHARVSAVTHNLYYDEDIK 108
>gi|448339139|ref|ZP_21528170.1| proteasome subunit alpha [Natrinema pallidum DSM 3751]
gi|445621110|gb|ELY74596.1| proteasome subunit alpha [Natrinema pallidum DSM 3751]
Length = 256
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 55/101 (54%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G L + V S LL+ S S EK
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTNDGVVLAVDKRVPSPLLEDS-SVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K DDHV A AG ++DA LI+ AR Q + Y EPI
Sbjct: 69 IHKADDHVGIASAGHVADARQLIDFARRQTQVNQLRYGEPI 109
>gi|448328343|ref|ZP_21517655.1| proteasome subunit alpha [Natrinema versiforme JCM 10478]
gi|445615867|gb|ELY69505.1| proteasome subunit alpha [Natrinema versiforme JCM 10478]
Length = 256
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 55/101 (54%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G L + V S LL+ S S EK
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTNDGVVLAVDKRVPSPLLEDS-SVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K DDHV A AG ++DA LI+ AR Q + Y EPI
Sbjct: 69 IHKADDHVGIASAGHVADARQLIDFARRQTQVNQLRYGEPI 109
>gi|76160964|gb|ABA40445.1| proteasome, alpha subunit-like protein [Solanum tuberosum]
Length = 249
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDY-----------MGC------LVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y +G ++G ++ LQ S S K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYAMEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSVRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +D+H+A A AG+ +DA +L+N AR++ + + ++P+
Sbjct: 63 IVNLDNHIALACAGLKADARVLVNKARIECQSHRLTVEDPV 103
>gi|407424966|gb|EKF39226.1| proteasome alpha 7 subunit, putative [Trypanosoma cruzi
marinkellei]
Length = 247
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYMG-------CLVGENNVTSKL----------LQTSTSAEKM 47
YDR TVFSP+G L+QV+Y C VG S + LQ S + K+
Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVRKGLCAVGVRGKDSIIFAVEKKSVQKLQDSRTIRKI 62
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
YK+D+H+ A AG+ +DA +L+N A+++ +R+ Y++ +
Sbjct: 63 YKLDEHIYLAFAGLSADARVLVNHAQLECQRFRLNYEDAV 102
>gi|448348492|ref|ZP_21537341.1| proteasome subunit alpha [Natrialba taiwanensis DSM 12281]
gi|445642859|gb|ELY95921.1| proteasome subunit alpha [Natrialba taiwanensis DSM 12281]
Length = 289
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGCLVGEN-------NVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G + E V S LL+ S EK
Sbjct: 10 YDRGHTIFSPDGRLYQVEYAREAVERGSPSVGVVTSEGVVLAARKRVRSPLLEPD-SVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++++D+H+A A AG +DA L+ AR + +++ Y EPI
Sbjct: 69 IHRVDEHLAVATAGHAADARQLVEAARKRCQQHRLQYGEPI 109
>gi|157105494|ref|XP_001648894.1| proteasome subunit alpha type [Aedes aegypti]
gi|157105496|ref|XP_001648895.1| proteasome subunit alpha type [Aedes aegypti]
gi|94469194|gb|ABF18446.1| 20S proteasome regulatory subunit alpha type PSMA5/PUP2 [Aedes
aegypti]
gi|108880078|gb|EAT44303.1| AAEL004308-PA [Aedes aegypti]
gi|108880079|gb|EAT44304.1| AAEL004308-PB [Aedes aegypti]
Length = 242
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G + E +TS L++ T EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTQEGVVMAVEKRITSPLME-PTKVEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ ++D H+ CA +G+M+D+ L++ ARV+ + + + Y E
Sbjct: 67 IVEVDRHIGCATSGLMADSRTLLDRARVECQNHWFVYDE 105
>gi|407859794|gb|EKG07166.1| proteasome alpha 7 subunit, putative [Trypanosoma cruzi]
Length = 247
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYMG-------CLVGENNVTSKL----------LQTSTSAEKM 47
YDR TVFSP+G L+QV+Y C VG S + LQ S + K+
Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVRKGLCAVGVRGKDSIIFAVEKKSVQKLQDSRTIRKI 62
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
YK+D+H+ A AG+ +DA +L+N A+++ +R+ Y++ +
Sbjct: 63 YKLDEHIYLAFAGLSADARVLVNHAQLECQRFRLNYEDAV 102
>gi|71409750|ref|XP_807203.1| proteasome alpha 7 subunit [Trypanosoma cruzi strain CL Brener]
gi|71415032|ref|XP_809596.1| proteasome alpha 7 subunit [Trypanosoma cruzi strain CL Brener]
gi|70871154|gb|EAN85352.1| proteasome alpha 7 subunit, putative [Trypanosoma cruzi]
gi|70874004|gb|EAN87745.1| proteasome alpha 7 subunit, putative [Trypanosoma cruzi]
Length = 247
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYMG-------CLVGENNVTSKL----------LQTSTSAEKM 47
YDR TVFSP+G L+QV+Y C VG S + LQ S + K+
Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVRKGLCAVGVRGKDSIIFAVEKKSVQKLQDSRTIRKI 62
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
YK+D+H+ A AG+ +DA +L+N A+++ +R+ Y++ +
Sbjct: 63 YKLDEHIYLAFAGLSADARVLVNHAQLECQRFRLNYEDAV 102
>gi|386002841|ref|YP_005921140.1| Proteasome subunit alpha [Methanosaeta harundinacea 6Ac]
gi|357210897|gb|AET65517.1| Proteasome subunit alpha [Methanosaeta harundinacea 6Ac]
Length = 250
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 59/102 (57%), Gaps = 21/102 (20%)
Query: 5 YDRQTTVFSPEGRLYQVDY-------------------MGCLVGENNVTSKLLQTSTSAE 45
YDR TVFSP+GRL+QV+Y + LV + +TS+L++ S E
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVRRGTTAVGIKAVDGVAVLV-DKRITSRLMEPE-SIE 66
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
K+++ID H+ A +G+++DA +LI+ ARV+++ Y E I
Sbjct: 67 KIFQIDQHIGAATSGLVADARVLIDRARVESQINRLVYDESI 108
>gi|315427138|dbj|BAJ48753.1| proteasome alpha subunit [Candidatus Caldiarchaeum subterraneum]
gi|315427157|dbj|BAJ48771.1| proteasome alpha subunit [Candidatus Caldiarchaeum subterraneum]
gi|343485772|dbj|BAJ51426.1| proteasome alpha subunit [Candidatus Caldiarchaeum subterraneum]
Length = 244
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 20/106 (18%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-------------MGCLVG-----ENNVTSKLLQTST 42
M+ YDR TVFSP+GRLYQV+Y + C G E + +KL Q
Sbjct: 5 MTGAYDRAITVFSPQGRLYQVEYALETVRSGSTALSITCREGVVLAVEERMHTKL-QNPD 63
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAY-QEPI 87
+ K+++ID+H+ A AG+ SDA +L++ ARV A+ +Y +EP+
Sbjct: 64 FSWKIFQIDEHIGAAAAGLNSDARVLVDNARVYAQTLRLSYDEEPL 109
>gi|448474863|ref|ZP_21602651.1| proteasome subunit alpha [Halorubrum aidingense JCM 13560]
gi|445817126|gb|EMA67003.1| proteasome subunit alpha [Halorubrum aidingense JCM 13560]
Length = 258
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGCLVGENNV------TSKLLQTSTSAEKM 47
YDR T++FSP+GR+YQV+Y +G E V S L + S EK+
Sbjct: 10 YDRGTSLFSPDGRIYQVEYAREAVSRGAPSVGVRTTEGVVFVAMSRASSTLMEAESIEKL 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+K+DDHV A AG ++DA LI+ AR Q++ Y EP+
Sbjct: 70 HKLDDHVGTASAGHVADARQLIDLARRQSQGNRLRYGEPV 109
>gi|448345142|ref|ZP_21534042.1| proteasome subunit alpha [Natrinema altunense JCM 12890]
gi|445636091|gb|ELY89255.1| proteasome subunit alpha [Natrinema altunense JCM 12890]
Length = 256
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 55/101 (54%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G L + V S LL+ S S EK
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTNDGVVLAVDKRVPSPLLEDS-SVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K DDHV A AG ++DA LI+ AR Q + Y EPI
Sbjct: 69 IHKADDHVGIASAGHVADARQLIDFARRQTQVNQLRYGEPI 109
>gi|145351122|ref|XP_001419934.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580167|gb|ABO98227.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 237
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E TS L+ S S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIAIKTREGVVLAVEKRATSPLMDAS-SLEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID HV CAV+G+ +DA ++ R + + + + Y EP+
Sbjct: 67 IAEIDAHVGCAVSGLTADAWTMVEHGRAECQNHYFTYNEPM 107
>gi|71755719|ref|XP_828774.1| proteasome subunit alpha 7 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|12229925|sp|Q9NDA2.1|PSA7_TRYBB RecName: Full=Proteasome subunit alpha type-7; AltName: Full=20S
proteasome subunit alpha-4
gi|9622230|gb|AAF89684.1|AF169652_1 20S proteasome alpha 4 subunit [Trypanosoma brucei]
gi|70834160|gb|EAN79662.1| proteasome alpha 7 subunit, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261334682|emb|CBH17676.1| proteasome alpha 7 subunit, putative [Trypanosoma brucei gambiense
DAL972]
Length = 247
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYMG-------CLVGENNVTSKL----------LQTSTSAEKM 47
YDR TVFSP+G L+QV+Y C VG S + LQ S + K+
Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVRKGLCAVGVKGKDSIIFAVEKKSVQKLQDSRTTRKI 62
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
YK+D+H+ A AG+ +DA +++N A+++ +R+ +Y++ I
Sbjct: 63 YKLDEHIYLASAGLSADARVVVNHAQLECQRFRLSYEDAI 102
>gi|448419987|ref|ZP_21580797.1| proteasome subunit alpha [Halosarcina pallida JCM 14848]
gi|445674155|gb|ELZ26700.1| proteasome subunit alpha [Halosarcina pallida JCM 14848]
Length = 260
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T+FSP+GRLYQV+Y G ++ + + L TS EK+
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTSEGVVLAADKRSRSPLMEPTSVEKI 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+K D+H+ A AG ++DA LI+ AR QA+ Y EPI
Sbjct: 70 HKADEHIGIASAGHVADARQLIDFARRQAQVNRLRYGEPI 109
>gi|336254519|ref|YP_004597626.1| proteasome endopeptidase complex subunit alpha [Halopiger
xanaduensis SH-6]
gi|335338508|gb|AEH37747.1| proteasome endopeptidase complex, alpha subunit [Halopiger
xanaduensis SH-6]
Length = 254
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 55/101 (54%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G L + V S LL+ S S EK
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTQDGVVLAVDKRVPSPLLEDS-SVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K DDH+ A AG ++DA LI+ AR Q + Y EPI
Sbjct: 69 IHKADDHIGIASAGHVADARQLIDFARRQTQVNQLRYGEPI 109
>gi|401417007|ref|XP_003872997.1| putative proteasome alpha 7 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489224|emb|CBZ24479.1| putative proteasome alpha 7 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 247
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGCLVGENNV------TSKLLQTSTSAEKM 47
YDR TVFSP+G L+QV+Y +G L G+ V ++ LQ S + K+
Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGLAAVGVLGGDCVVIAVEKKSAVKLQDSRTIRKI 62
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
YK+D H+ A AG+ +DA +LIN A+++ +R++ Y++ +
Sbjct: 63 YKVDAHIYLAFAGLSADARVLINKAQLECQRFSLNYEDTM 102
>gi|448364978|ref|ZP_21553553.1| proteasome subunit alpha [Natrialba aegyptia DSM 13077]
gi|445657202|gb|ELZ10032.1| proteasome subunit alpha [Natrialba aegyptia DSM 13077]
Length = 253
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 55/101 (54%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G L + V S LL+ S S EK
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTDDGVVLAVDKRVPSPLLEDS-SVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K DDH+ A AG ++DA LI+ AR Q + Y EPI
Sbjct: 69 IHKADDHIGIASAGHVADARQLIDFARRQTQVNQLRYGEPI 109
>gi|448351923|ref|ZP_21540717.1| proteasome subunit alpha [Natrialba taiwanensis DSM 12281]
gi|445632483|gb|ELY85695.1| proteasome subunit alpha [Natrialba taiwanensis DSM 12281]
Length = 253
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 55/101 (54%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G L + V S LL+ S S EK
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTDDGVVLAVDKRVPSPLLEDS-SVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K DDH+ A AG ++DA LI+ AR Q + Y EPI
Sbjct: 69 IHKADDHIGIASAGHVADARQLIDFARRQTQVNQLRYGEPI 109
>gi|45190899|ref|NP_985153.1| AER296Wp [Ashbya gossypii ATCC 10895]
gi|44983941|gb|AAS52977.1| AER296Wp [Ashbya gossypii ATCC 10895]
gi|374108378|gb|AEY97285.1| FAER296Wp [Ashbya gossypii FDAG1]
Length = 260
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR + FSPEGRL+QV+Y G ++G E VTS LL+ S S EK
Sbjct: 8 YDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGIATNEGVVLGVEKRVTSPLLE-SDSIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ ++D H+ CA++G+ +DA +I AR+ + + Y E I
Sbjct: 67 IVEVDRHIGCAMSGLTADARSMIEHARISSVTHNLYYDEEI 107
>gi|440803906|gb|ELR24789.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Acanthamoeba castellanii str. Neff]
Length = 244
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC------LVGENNVTSKLLQTSTSAEKM 47
YDR TVFSP+G L+QV+Y +G ++G + LQ + K+
Sbjct: 3 YDRAITVFSPDGHLFQVEYALEAVRKGTTAVGVRGKSILVLGVEKKSVPKLQDPRTVRKI 62
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++DDH++ A AG+ +DA +LIN AR++ + Y+ +EP+
Sbjct: 63 VQLDDHISLAFAGLTADARVLINKARLECQSYSLTIEEPV 102
>gi|326514224|dbj|BAJ92262.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 249
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y ++G ++ LQ S S K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSVRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +D HVA A AG+ +DA +LIN ARV+ + + ++P+
Sbjct: 63 IASLDTHVALACAGLKADARVLINRARVECQSHRLTVEDPV 103
>gi|388583639|gb|EIM23940.1| 20S proteasome subunit [Wallemia sebi CBS 633.66]
Length = 259
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 19/105 (18%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVG-----------ENNVTSKLLQTST 42
MSR YDR TVFSP+G L+QV+Y C VG E T +L Q
Sbjct: 1 MSRSYDRALTVFSPDGHLFQVEYALEAVRKGTCAVGLAGKDIVILGVEKKSTLQL-QDPR 59
Query: 43 SAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
S +K+ +DDHV+ A +G+ +D IL++ ARV+ + + ++P+
Sbjct: 60 SIKKVVNLDDHVSLAFSGLTADGRILVDKARVECQSHRLTVEDPV 104
>gi|331233003|ref|XP_003329163.1| 20S proteasome subunit alpha 4 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309308153|gb|EFP84744.1| 20S proteasome subunit alpha 4 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 265
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 17/104 (16%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM-------GCLVGENNVTSKLL----------QTSTS 43
MSR YDR TVFSP+G L+QV+Y C VG + +L Q +
Sbjct: 1 MSRSYDRALTVFSPDGHLFQVEYALEAVQKGTCAVGVRGKSCAILGVEKKSVLQLQDPRT 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
K+ +DDHV A AG+ +DA ILI+ AR + + + ++P+
Sbjct: 61 VRKVAMLDDHVCLAFAGLTADARILIDKARTECQSHRLTVEDPV 104
>gi|302761762|ref|XP_002964303.1| hypothetical protein SELMODRAFT_270401 [Selaginella moellendorffii]
gi|302768627|ref|XP_002967733.1| hypothetical protein SELMODRAFT_145179 [Selaginella moellendorffii]
gi|300164471|gb|EFJ31080.1| hypothetical protein SELMODRAFT_145179 [Selaginella moellendorffii]
gi|300168032|gb|EFJ34636.1| hypothetical protein SELMODRAFT_270401 [Selaginella moellendorffii]
Length = 250
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 17/103 (16%)
Query: 2 SRRYDRQTTVFSPEGRLYQVDYMGCLVGENNV-----------------TSKLLQTSTSA 44
S RYDR TVFSP+G L+QV+Y V + N ++ LQ + +
Sbjct: 3 SGRYDRAITVFSPDGHLFQVEYAQEAVRKGNAAVGVRGTDTIVLGVEKKSTAKLQDARTV 62
Query: 45 EKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
K+ +D+HVA A AG+ +DA +L+N ARV+ + + ++P+
Sbjct: 63 HKILSLDEHVALAFAGLTADARVLVNRARVECQSHRLTVEDPV 105
>gi|167381649|ref|XP_001735801.1| proteasome subunit alpha type-5 [Entamoeba dispar SAW760]
gi|165902059|gb|EDR27981.1| proteasome subunit alpha type-5 [Entamoeba dispar SAW760]
Length = 247
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 19/101 (18%)
Query: 6 DRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEKM 47
D FS EGRL+QV+Y +G L E ++S L+ S S EK+
Sbjct: 9 DHGVNTFSSEGRLFQVEYATEAMKLGSTVIGIQTKEGVVLAVEKRISSPLMLGS-SIEKI 67
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+IDDH+ AV+G+ +DA LI+ AR++A+ + + Y EPI
Sbjct: 68 IEIDDHIGAAVSGLTADARTLIDNARLEAQNHRFMYDEPIN 108
>gi|390346993|ref|XP_003726681.1| PREDICTED: proteasome subunit alpha type-7-like isoform 1
[Strongylocentrotus purpuratus]
Length = 254
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 17/104 (16%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MGC------LVGENNVTSKLLQTSTS 43
MS RYDR TVFSP+G L+QV+Y +G ++G + LQ +
Sbjct: 1 MSSRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDLVVLGVEKKSVAKLQEERT 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
K+ +DDHV A AG+ +DA ILIN AR++ + + ++P+
Sbjct: 61 VRKICVLDDHVCMAFAGLTADARILINRARIECQSHRLTVEDPV 104
>gi|194757395|ref|XP_001960950.1| GF11246 [Drosophila ananassae]
gi|190622248|gb|EDV37772.1| GF11246 [Drosophila ananassae]
Length = 252
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 17/104 (16%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYMG---------CLVGENNV--------TSKLLQTSTS 43
M+ RYDR T++SP+G L QV+Y C V NNV ++ LQ
Sbjct: 1 MAERYDRAVTIYSPDGHLLQVEYAQEAVRKGSTVCGVRTNNVIVLGMEKKSTSDLQEERF 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
K++ IDDHV AG+ +DA IL+N +V+A+ + +++P+
Sbjct: 61 NRKIFTIDDHVVMTFAGLTADARILVNRVQVEAQSHRLNFEKPV 104
>gi|435852003|ref|YP_007313589.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Methanomethylovorans hollandica DSM 15978]
gi|433662633|gb|AGB50059.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Methanomethylovorans hollandica DSM 15978]
Length = 261
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYMG------------------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y L+ + +TS+L++ + S EK
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAAGIKAKEGVVLLVDKRITSRLIE-AESIEK 67
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+++ID H+ A +G+++DA L++ ARV+A+ +Y E I
Sbjct: 68 IFQIDSHIGVATSGLVADARSLVDRARVEAQINKVSYDENI 108
>gi|332375765|gb|AEE63023.1| unknown [Dendroctonus ponderosae]
Length = 248
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 22/118 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MGC------------LVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E + SKLL + S +K
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIETVKLGATSIGICTKEGIVLAAEKRLGSKLL-VNDSMDK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLAL 104
+ K+D H+A AG+++D+ L++ ARV+A+ + + Y I+ +D+T Q LAL
Sbjct: 67 ISKVDTHIASTFAGLIADSRTLVDHARVEAQNFLFTYGRQIR--VEDVT-QSVANLAL 121
>gi|448393336|ref|ZP_21567661.1| proteasome subunit alpha [Haloterrigena salina JCM 13891]
gi|445663751|gb|ELZ16493.1| proteasome subunit alpha [Haloterrigena salina JCM 13891]
Length = 256
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 55/101 (54%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G L + V S LL+ S S EK
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRVPSPLLEDS-SVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K DDH+ A AG ++DA LI+ AR Q + Y EPI
Sbjct: 69 IHKADDHIGIASAGHVADARQLIDFARRQTQVNQLRYGEPI 109
>gi|448410502|ref|ZP_21575207.1| proteasome subunit alpha [Halosimplex carlsbadense 2-9-1]
gi|445671538|gb|ELZ24125.1| proteasome subunit alpha [Halosimplex carlsbadense 2-9-1]
Length = 255
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G L + + S L++ S S EK
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTADGVVLAVDKRIRSPLMERS-SVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K DDH+ A AG ++DA LI+ AR QA+ Y EPI
Sbjct: 69 IHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYGEPI 109
>gi|432916850|ref|XP_004079410.1| PREDICTED: proteasome subunit alpha type-7-like [Oryzias latipes]
Length = 197
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 39/160 (24%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDY-----------MG------CLVGENNVTSKLLQTSTS 43
M+ RYDR TVFSP+G L+QV+Y +G ++G + LQ +
Sbjct: 1 MAARYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGKDIVVLGVEKKSVAKLQDERT 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI---------------- 87
K+ +D+HV A AG+ +DA I+IN ARV+ + + ++P+
Sbjct: 61 VRKICALDEHVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTANAIGRSAKTVREFL 120
Query: 88 -QDYKDDMTR--QEAVQLALKVLRKTMDSTSLTSEKLELA 124
++Y D+ EA++LA+K L + + S + +ELA
Sbjct: 121 EKNYTDEAIAGDNEAIKLAIKALLEVVQS---GGKNIELA 157
>gi|326506596|dbj|BAJ91339.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527691|dbj|BAK08120.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528863|dbj|BAJ97453.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 249
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDY-----------MGC------LVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y +G ++G ++ LQ S S K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGVDTVVLGVEKKSTPKLQDSRSVRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +D HVA A AG+ +DA +LIN ARV+ + + ++P+
Sbjct: 63 IASLDTHVALACAGLKADARVLINRARVECQSHRLTVEDPV 103
>gi|336373240|gb|EGO01578.1| hypothetical protein SERLA73DRAFT_176952 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386091|gb|EGO27237.1| hypothetical protein SERLADRAFT_460292 [Serpula lacrymans var.
lacrymans S7.9]
Length = 282
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 15/98 (15%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-------GCLVGENNVTSKLL--------QTSTSAEKMYK 49
YD TVFSP+GRL+QV+Y VG + T +L + ++ +KMY+
Sbjct: 6 YDSDNTVFSPQGRLHQVEYALEAVKQGSAAVGLRSKTHSILLALKRSTGELASYQQKMYR 65
Query: 50 IDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
IDDH+ A+AG+ SDA +L N R QA A+ P+
Sbjct: 66 IDDHIGIAIAGLTSDARVLSNFMRQQAMSSRMAFNRPM 103
>gi|284164986|ref|YP_003403265.1| proteasome endopeptidase complex subunit alpha [Haloterrigena
turkmenica DSM 5511]
gi|284014641|gb|ADB60592.1| proteasome endopeptidase complex, alpha subunit [Haloterrigena
turkmenica DSM 5511]
Length = 256
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 55/101 (54%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR T+FSP+GRLYQV+Y +G L + V S LL+ S S EK
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRVPSPLLEDS-SVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++K DDH+ A AG ++DA LI+ AR Q + Y EPI
Sbjct: 69 IHKADDHIGIASAGHVADARQLIDFARRQTQVNQLRYGEPI 109
>gi|67469471|ref|XP_650714.1| proteasome alpha subunit [Entamoeba histolytica HM-1:IMSS]
gi|67475615|ref|XP_653498.1| proteasome alpha subunit [Entamoeba histolytica HM-1:IMSS]
gi|12229916|sp|Q94561.2|PSA5_ENTHI RecName: Full=Proteasome subunit alpha type-5
gi|17980210|gb|AAL50554.1| proteasome alpha subunit [Entamoeba histolytica]
gi|56467364|gb|EAL45327.1| proteasome alpha subunit, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56470455|gb|EAL48112.1| proteasome alpha subunit, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 247
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 19/101 (18%)
Query: 6 DRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEKM 47
D FS EGRL+QV+Y +G L E ++S L+ S S EK+
Sbjct: 9 DHGVNTFSSEGRLFQVEYATEAMKLGSTVIGIQTKEGVVLAVEKRISSPLMLGS-SIEKI 67
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+IDDH+ AV+G+ +DA LI+ AR++A+ + + Y EPI
Sbjct: 68 IEIDDHIGAAVSGLTADARTLIDNARLEAQNHRFMYDEPIN 108
>gi|449550046|gb|EMD41011.1| 20S proteasome subunit [Ceriporiopsis subvermispora B]
Length = 285
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 15/98 (15%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-------GCLVGENNVTSKLL--------QTSTSAEKMYK 49
YD TVFSP+GRL+QV+Y VG + T +L + ++ +KMY+
Sbjct: 6 YDSDNTVFSPQGRLHQVEYALEAVKQGSAAVGLRSKTHSILLALKRSTGELASYQQKMYR 65
Query: 50 IDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
IDDHV A+AG+ SDA +L N R QA + PI
Sbjct: 66 IDDHVGIAIAGLTSDARVLSNFMRQQAMSSRMVFNRPI 103
>gi|312067265|ref|XP_003136661.1| 20S proteasome alpha5 subunit [Loa loa]
gi|307768173|gb|EFO27407.1| proteasome subunit alpha type-5 [Loa loa]
Length = 248
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E TSKL+ + + EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIRTTEGVILAAEKRATSKLM-VNDAIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ K+D HVA AG+++D+ L+ A+++A+ + + Y I+
Sbjct: 67 ISKVDSHVAVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIR 108
>gi|448435788|ref|ZP_21586856.1| proteasome subunit alpha [Halorubrum tebenquichense DSM 14210]
gi|445683223|gb|ELZ35623.1| proteasome subunit alpha [Halorubrum tebenquichense DSM 14210]
Length = 257
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 51/100 (51%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T+FSP+GRLYQV+Y G ++ + L S EK+
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGIRAEDGVVLAADKRARSPLMEPESIEKL 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+K DDHV A AG ++DA LI+ AR QA+ Y EP+
Sbjct: 70 HKADDHVGVASAGHVADARQLIDFARRQAQVNQLRYGEPV 109
>gi|448424332|ref|ZP_21582382.1| proteasome subunit alpha [Halorubrum terrestre JCM 10247]
gi|445682325|gb|ELZ34744.1| proteasome subunit alpha [Halorubrum terrestre JCM 10247]
Length = 262
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 51/100 (51%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T+FSP+GRLYQV+Y G ++ + L S EK+
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGIRAEDGVVLAADKRARSPLMEPESIEKL 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+K DDHV A AG ++DA LI+ AR QA+ Y EP+
Sbjct: 70 HKADDHVGVASAGHVADARQLIDFARRQAQVNQLRYGEPV 109
>gi|448491591|ref|ZP_21608431.1| proteasome subunit alpha [Halorubrum californiensis DSM 19288]
gi|445692591|gb|ELZ44762.1| proteasome subunit alpha [Halorubrum californiensis DSM 19288]
Length = 257
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 51/100 (51%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T+FSP+GRLYQV+Y G ++ + L S EK+
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGVRAEDGVVLAADKRARSPLMEPESIEKL 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+K DDHV A AG ++DA LI+ AR QA+ Y EP+
Sbjct: 70 HKADDHVGVASAGHVADARQLIDFARRQAQVNQLRYGEPV 109
>gi|168006015|ref|XP_001755705.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693024|gb|EDQ79378.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 249
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 58/101 (57%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDY-----------MGC------LVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y +G ++G ++ LQ + + K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTAKLQDARTVRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ K+D+HV+ A AG+ +DA +L+N AR++ + + ++P+
Sbjct: 63 ILKLDEHVSLAFAGLTADARVLVNRARIECQSHRLTVEDPV 103
>gi|383624771|ref|ZP_09949177.1| proteasome subunit alpha [Halobiforma lacisalsi AJ5]
gi|448697112|ref|ZP_21698268.1| proteasome subunit alpha [Halobiforma lacisalsi AJ5]
gi|445782241|gb|EMA33091.1| proteasome subunit alpha [Halobiforma lacisalsi AJ5]
Length = 247
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM----------------GC--LVGENNVTSKLLQTSTSAEK 46
YDR +T+FSP+GRLYQV+Y C L V S LL+ TS EK
Sbjct: 10 YDRGSTIFSPDGRLYQVEYAREAVDRGAPSVGVVADDCTVLAARKRVRSPLLEP-TSVEK 68
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++ +DDH+A A AG +DA L++ AR ++R+ Y E I
Sbjct: 69 VHAVDDHLAIASAGHAADARQLVDVARRASQRHRLRYDEQI 109
>gi|31211921|ref|XP_314945.1| AGAP008816-PA [Anopheles gambiae str. PEST]
gi|30176407|gb|EAA10150.2| AGAP008816-PA [Anopheles gambiae str. PEST]
Length = 242
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 19/99 (19%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y G ++ E +TS L++ S EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKFGSTAIGISTPDGVVMAVEKRITSSLIEPS-KMEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQE 85
+ ++D H+ CA +G+M+D+ L++ AR++ + + + Y E
Sbjct: 67 IVEVDRHIGCATSGLMADSRTLLDRARIECQNHWFVYNE 105
>gi|448727266|ref|ZP_21709632.1| proteasome subunit alpha [Halococcus morrhuae DSM 1307]
gi|445791480|gb|EMA42120.1| proteasome subunit alpha [Halococcus morrhuae DSM 1307]
Length = 251
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 50/100 (50%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T+FSP+GRLYQV+Y G + + L S EKM
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVKTDDGVVFAVDKRFRSPLMERESVEKM 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+K DDH+ A AG ++DA LI+ AR QA+ Y EPI
Sbjct: 70 HKADDHIGIASAGHVADARQLIDFARRQAQVEQLRYGEPI 109
>gi|168051540|ref|XP_001778212.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670425|gb|EDQ56994.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 249
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 58/101 (57%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDY-----------MGC------LVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y +G ++G ++ LQ + + K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTAKLQDARTVRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ K+D+HV+ A AG+ +DA +L+N AR++ + + ++P+
Sbjct: 63 ILKLDEHVSLAFAGLTADARVLVNRARIECQSHRLTVEDPV 103
>gi|448529180|ref|ZP_21620439.1| proteasome subunit alpha [Halorubrum hochstenium ATCC 700873]
gi|445709613|gb|ELZ61439.1| proteasome subunit alpha [Halorubrum hochstenium ATCC 700873]
Length = 260
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 51/100 (51%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T+FSP+GRLYQV+Y G ++ + L S EK+
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGIRAEDGVVLAADKRARSPLMEPESIEKL 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+K DDHV A AG ++DA LI+ AR QA+ Y EP+
Sbjct: 70 HKADDHVGVASAGHVADARQLIDFARRQAQVNQLRYGEPV 109
>gi|170588333|ref|XP_001898928.1| 20S proteasome alpha5 subunit [Brugia malayi]
gi|158593141|gb|EDP31736.1| 20S proteasome alpha5 subunit, putative [Brugia malayi]
Length = 248
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E TSKL+ + + EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIRTIEGVILAAEKRATSKLM-VNDAIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ K+D HVA AG+++D+ L+ A+++A+ + + Y I+
Sbjct: 67 ISKVDSHVAVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIR 108
>gi|307106712|gb|EFN54957.1| hypothetical protein CHLNCDRAFT_24020 [Chlorella variabilis]
Length = 246
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 19/94 (20%)
Query: 4 RYDRQTTVFSPEGRLYQVDYM------GCL-VG-----------ENNVTSKLLQTSTSAE 45
RYDR TVFSP+G L+QV+Y G L VG E +KL Q + +
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGALAVGVRGTDAIVLGVEKKAVAKL-QVAQTVR 61
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRY 79
K+ +IDDH+ A AG+ +DA +LIN AR++A+ +
Sbjct: 62 KIAQIDDHICLAFAGLTADARVLINKARIEAQSH 95
>gi|324515585|gb|ADY46251.1| Proteasome subunit alpha type-5 [Ascaris suum]
Length = 248
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 19/102 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGRL+QV+Y +G L E TSKL+ + + EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIRTNEGVVLAAEKRATSKLM-VNDAIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+ K+D HVA AG+++D+ L+ A+++A+ + + Y I+
Sbjct: 67 ISKVDSHVAVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIR 108
>gi|412990174|emb|CCO19492.1| proteasome subunit alpha type-4 [Bathycoccus prasinos]
Length = 218
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 27 LVGENNVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
+ E + SKLL++S EK Y I++H+A AVAGI SDANIL+N ARV A+R+ + Y EP
Sbjct: 21 IAAERRILSKLLESSEK-EKTYYINEHIAVAVAGISSDANILVNYARVVAQRHLFTYGEP 79
Query: 87 I 87
I
Sbjct: 80 I 80
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 89 DYKDDMTRQEAVQLALKVLRKTMDSTSLTSEKLELAEV 126
+Y + + +E +L LK+LRK+MD T L E +E+ E+
Sbjct: 153 EYVETLKCEEGRELILKILRKSMDKTQLMPENIEMLEI 190
>gi|448739379|ref|ZP_21721394.1| proteasome subunit alpha [Halococcus thailandensis JCM 13552]
gi|445799974|gb|EMA50343.1| proteasome subunit alpha [Halococcus thailandensis JCM 13552]
Length = 251
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 50/100 (50%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T+FSP+GRLYQV+Y G + + L S EKM
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVKTDDGVVFAVDKRFRSPLMERESVEKM 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+K DDH+ A AG ++DA LI+ AR QA+ Y EPI
Sbjct: 70 HKADDHIGIASAGHVADARQLIDFARRQAQVEQLRYGEPI 109
>gi|168066948|ref|XP_001785391.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663013|gb|EDQ49804.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 249
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 58/101 (57%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDY-----------MGC------LVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y +G ++G ++ LQ + + K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTAKLQDARTVRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ K+D+HV+ A AG+ +DA +L+N AR++ + + ++P+
Sbjct: 63 ILKLDEHVSLAFAGLTADARVLVNRARIECQSHRLTVEDPV 103
>gi|157869192|ref|XP_001683148.1| putative proteasome alpha 5 subunit [Leishmania major strain
Friedlin]
gi|68224031|emb|CAJ05127.1| putative proteasome alpha 5 subunit [Leishmania major strain
Friedlin]
Length = 244
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGR++Q++Y +G L E V S L+ S S K
Sbjct: 8 YDRGVNTFSPEGRIFQIEYAVEAIKLGSTSLGIRTPKGVVLAAEKRVPSTLVVPS-SMSK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID H+A ++G+++DA IL+ ARV+++ + + Y EP+
Sbjct: 67 IMEIDSHIAAVMSGMVADARILVEHARVESQNHRFTYNEPM 107
>gi|71746456|ref|XP_822283.1| proteasome subunit alpha 5 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|12229950|sp|Q9XZG5.1|PSA5_TRYBB RecName: Full=Proteasome subunit alpha type-5; AltName: Full=20S
proteasome subunit alpha-5
gi|4884926|gb|AAD31877.1|AF140353_1 20S proteasome alpha 5 subunit [Trypanosoma brucei brucei]
gi|70831951|gb|EAN77455.1| proteasome alpha 5 subunit, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 246
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR FSPEGR++Q++Y +G + E V S L+ S S K
Sbjct: 8 YDRGVNTFSPEGRIFQIEYAIEAIKLGSTSLGIQTPDAVIIAAEKRVPSTLVDPS-SVNK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID H+ ++G+++DA IL++ ARV+A+ + + Y EP+
Sbjct: 67 ILEIDHHIGTVLSGMVADARILVDHARVEAQNHRFTYDEPM 107
>gi|261331940|emb|CBH14933.1| 20S proteasome subunit alpha 5 [Trypanosoma brucei gambiense
DAL972]
Length = 246
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MGC-------LVGENNVTSKLLQTSTSAEK 46
YDR FSPEGR++Q++Y +G + E V S L+ S S K
Sbjct: 8 YDRGVNTFSPEGRIFQIEYAIEAIKLGSTSLGIQTPDAVIIAAEKRVPSTLVDPS-SVNK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID H+ ++G+++DA IL++ ARV+A+ + + Y EP+
Sbjct: 67 ILEIDHHIGTVLSGMVADARILVDHARVEAQNHRFTYDEPM 107
>gi|195635203|gb|ACG37070.1| proteasome subunit alpha type 7 [Zea mays]
Length = 249
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDY-----------MGC------LVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y +G ++G ++ LQ S S K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGVDTVVLGVEKKSTPKLQDSRSVRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +D H+A A AG+ +DA +LIN ARV+ + + ++P+
Sbjct: 63 IVSLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPV 103
>gi|448502557|ref|ZP_21612670.1| proteasome subunit alpha [Halorubrum coriense DSM 10284]
gi|445694052|gb|ELZ46187.1| proteasome subunit alpha [Halorubrum coriense DSM 10284]
Length = 257
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 51/100 (51%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T+FSP+GRLYQV+Y G ++ + L S EK+
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGIRAEDGVVLAADKRARSPLMEPESIEKL 69
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+K DDHV A AG ++DA LI+ AR QA+ Y EP+
Sbjct: 70 HKADDHVGVASAGHVADARQLIDFARRQAQVNRLRYGEPV 109
>gi|448414403|ref|ZP_21577472.1| proteasome subunit alpha [Halosarcina pallida JCM 14848]
gi|445681969|gb|ELZ34393.1| proteasome subunit alpha [Halosarcina pallida JCM 14848]
Length = 250
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 17/100 (17%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEKM 47
YDR T++FSP+GR+YQV+Y G ++ TS L + S EK+
Sbjct: 9 YDRGTSLFSPDGRIYQVEYAREAVKRGAPSLGIRTADGVVLAAQRRTSSSLMEADSIEKI 68
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+K+DD++ A AG ++DA L++ AR +A+ Y EPI
Sbjct: 69 HKLDDYLGAATAGHVADARQLVDDARQEAQVNHLRYGEPI 108
>gi|405120341|gb|AFR95112.1| proteasome subunit alpha type-7 [Cryptococcus neoformans var.
grubii H99]
Length = 289
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 17/104 (16%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM----------------GCLV-GENNVTSKLLQTSTS 43
MSR YDR TVFSP+G L+QV+Y C+V G ++ LQ +
Sbjct: 1 MSRSYDRALTVFSPDGHLFQVEYALEAVRRGTCAVGVRGKSCVVLGVEKKSTLQLQDPRT 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
K+ +DDHV A AG+ +D ILI+ AR++ + + ++P+
Sbjct: 61 VRKVAMLDDHVCVAFAGLTADGRILIDKARIECQSHRLTVEDPV 104
>gi|242081935|ref|XP_002445736.1| hypothetical protein SORBIDRAFT_07g024900 [Sorghum bicolor]
gi|241942086|gb|EES15231.1| hypothetical protein SORBIDRAFT_07g024900 [Sorghum bicolor]
Length = 249
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y ++G ++ LQ S S K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGVDTVVLGVEKKSTPKLQDSRSVRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +D H+A A AG+ +DA +LIN ARV+ + + ++P+
Sbjct: 63 IASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPV 103
>gi|167389391|ref|XP_001738943.1| proteasome subunit alpha type-5 [Entamoeba dispar SAW760]
gi|165897610|gb|EDR24708.1| proteasome subunit alpha type-5 [Entamoeba dispar SAW760]
Length = 247
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 19/101 (18%)
Query: 6 DRQTTVFSPEGRLYQVDY------MG------------CLVGENNVTSKLLQTSTSAEKM 47
D FS EGRL+QV+Y +G L E ++S L+ S S EK+
Sbjct: 9 DHGVNTFSSEGRLFQVEYATEAMKLGSTVIGIQTKEGVVLAVEKRISSPLMLGS-SIEKI 67
Query: 48 YKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQ 88
+IDDH+ AV+G+ +DA LI+ AR++A+ + + Y EPI
Sbjct: 68 IEIDDHIGAAVSGLTADARTLIDHARLEAQNHRFMYDEPIN 108
>gi|357159679|ref|XP_003578524.1| PREDICTED: proteasome subunit alpha type-7-B-like isoform 1
[Brachypodium distachyon]
gi|357159682|ref|XP_003578525.1| PREDICTED: proteasome subunit alpha type-7-B-like isoform 2
[Brachypodium distachyon]
Length = 249
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDYM-----------------GCLVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y ++G ++ LQ S S K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSVRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +D H+A A AG+ +DA +LIN ARV+ + + ++P+
Sbjct: 63 IASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPV 103
>gi|254168315|ref|ZP_04875161.1| peptidase, T1 family [Aciduliprofundum boonei T469]
gi|254169360|ref|ZP_04876189.1| peptidase, T1 family [Aciduliprofundum boonei T469]
gi|289595863|ref|YP_003482559.1| proteasome endopeptidase complex, alpha subunit [Aciduliprofundum
boonei T469]
gi|197621679|gb|EDY34265.1| peptidase, T1 family [Aciduliprofundum boonei T469]
gi|197622824|gb|EDY35393.1| peptidase, T1 family [Aciduliprofundum boonei T469]
gi|289533650|gb|ADD07997.1| proteasome endopeptidase complex, alpha subunit [Aciduliprofundum
boonei T469]
Length = 243
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 28/124 (22%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR TVFSP+GRL+QV+Y +G L+ + V S+LL S EK
Sbjct: 8 YDRAITVFSPDGRLFQVEYARAAVKRGTTTIGLKFKDGVVLMADKRVRSRLLDPK-SMEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARV--QARRYAYAYQ-------EPIQDYKDDMTRQ 97
++ ID+H+ CA +G++ DA +L++ AR+ Q R Y + + I DYK T+
Sbjct: 67 IFLIDEHIGCATSGLVGDARVLVDYARLIAQIERVTYGERISVEHLVKRISDYKQQYTQY 126
Query: 98 EAVQ 101
V+
Sbjct: 127 GGVR 130
>gi|341882023|gb|EGT37958.1| hypothetical protein CAEBREN_13512 [Caenorhabditis brenneri]
Length = 253
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDYM----------------GCLV-GENNVTSKLLQTSTSAEK 46
RYDR T+FSP+G L+QV+Y C+V G + LQ + K
Sbjct: 3 RYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++ IDDHV A AG+ +DA +L++ AR++ + Y ++P+
Sbjct: 63 IHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPV 103
>gi|321257298|ref|XP_003193540.1| proteasome subunit alpha type 7 [Cryptococcus gattii WM276]
gi|317460010|gb|ADV21753.1| Proteasome subunit alpha type 7, putative [Cryptococcus gattii
WM276]
Length = 289
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 17/104 (16%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM----------------GCLV-GENNVTSKLLQTSTS 43
MSR YDR TVFSP+G L+QV+Y C+V G ++ LQ +
Sbjct: 1 MSRSYDRALTVFSPDGHLFQVEYALEAVRRGTCAVGVRGKSCVVLGVEKKSTLQLQDPRT 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
K+ +DDHV A AG+ +D ILI+ AR++ + + ++P+
Sbjct: 61 VRKVAMLDDHVCVAFAGLTADGRILIDKARIECQSHRLTVEDPV 104
>gi|58266240|ref|XP_570276.1| hypothetical protein CND01660 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134111192|ref|XP_775738.1| hypothetical protein CNBD4670 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258402|gb|EAL21091.1| hypothetical protein CNBD4670 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226509|gb|AAW42969.1| hypothetical protein CND01660 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 289
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 17/104 (16%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYM----------------GCLV-GENNVTSKLLQTSTS 43
MSR YDR TVFSP+G L+QV+Y C+V G ++ LQ +
Sbjct: 1 MSRSYDRALTVFSPDGHLFQVEYALEAVRRGTCAVGVRGKSCVVLGVEKKSTLQLQDPRT 60
Query: 44 AEKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
K+ +DDHV A AG+ +D ILI+ AR++ + + ++P+
Sbjct: 61 VRKVAMLDDHVCVAFAGLTADGRILIDKARIECQSHRLTVEDPV 104
>gi|268566107|ref|XP_002639636.1| C. briggsae CBR-PAS-4 protein [Caenorhabditis briggsae]
Length = 253
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDYM----------------GCLV-GENNVTSKLLQTSTSAEK 46
RYDR T+FSP+G L+QV+Y C+V G + LQ + K
Sbjct: 3 RYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++ IDDHV A AG+ +DA +L++ AR++ + Y ++P+
Sbjct: 63 IHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPV 103
>gi|320101502|ref|YP_004177094.1| proteasome endopeptidase complex subunit alpha [Desulfurococcus
mucosus DSM 2162]
gi|319753854|gb|ADV65612.1| proteasome endopeptidase complex, alpha subunit [Desulfurococcus
mucosus DSM 2162]
Length = 246
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 1 MSRRYDRQTTVFSPEGRLYQVDYMGCLVGENNVTSKLLQTSTSA---------------- 44
M+ YDR T+FSP+GR+YQV+Y V T + S S
Sbjct: 5 MAAAYDRAITIFSPDGRIYQVEYAFEAVRRGWTTIGIRTKSASIVAAEKRKITPLVDEKA 64
Query: 45 -EKMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEP 86
+K++KIDDHV + AG+ D ILIN A QA + + Y EP
Sbjct: 65 IQKIFKIDDHVGASYAGMAGDGRILINYAISQALLHRFYYDEP 107
>gi|146086176|ref|XP_001465480.1| 20S proteasome subunit alpha 5, (putative) [Leishmania infantum
JPCM5]
gi|398015092|ref|XP_003860736.1| proteasome alpha 5 subunit, putative [Leishmania donovani]
gi|134069578|emb|CAM67901.1| 20S proteasome subunit alpha 5, (putative) [Leishmania infantum
JPCM5]
gi|322498958|emb|CBZ34031.1| proteasome alpha 5 subunit, putative [Leishmania donovani]
Length = 244
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGR++Q++Y +G L E V S L+ S S K
Sbjct: 8 YDRGVNTFSPEGRIFQIEYAVEAIKLGSTSLGIRTPEGVVLAAEKRVPSTLVVPS-SMSK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID H+A ++G+++DA IL+ ARV+++ + + Y EP+
Sbjct: 67 IMEIDSHIATVMSGMVADARILVEHARVESQNHRFTYNEPM 107
>gi|308499719|ref|XP_003112045.1| CRE-PAS-4 protein [Caenorhabditis remanei]
gi|308268526|gb|EFP12479.1| CRE-PAS-4 protein [Caenorhabditis remanei]
Length = 253
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDYM----------------GCLV-GENNVTSKLLQTSTSAEK 46
RYDR T+FSP+G L+QV+Y C+V G + LQ + K
Sbjct: 3 RYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++ IDDHV A AG+ +DA +L++ AR++ + Y ++P+
Sbjct: 63 IHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPV 103
>gi|17508491|ref|NP_492360.1| Protein PAS-4 [Caenorhabditis elegans]
gi|12229917|sp|Q95005.1|PSA7_CAEEL RecName: Full=Proteasome subunit alpha type-7; AltName:
Full=Proteasome subunit alpha 4
gi|3874776|emb|CAB02269.1| Protein PAS-4 [Caenorhabditis elegans]
Length = 253
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDYM----------------GCLV-GENNVTSKLLQTSTSAEK 46
RYDR T+FSP+G L+QV+Y C+V G + LQ + K
Sbjct: 3 RYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
++ IDDHV A AG+ +DA +L++ AR++ + Y ++P+
Sbjct: 63 IHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPV 103
>gi|413925737|gb|AFW65669.1| proteasome subunit alpha type [Zea mays]
Length = 249
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 17/101 (16%)
Query: 4 RYDRQTTVFSPEGRLYQVDY-----------MGC------LVGENNVTSKLLQTSTSAEK 46
RYDR TVFSP+G L+QV+Y +G ++G ++ LQ S S K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGVDTVVLGVEKKSTPKLQDSRSVRK 62
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +D H+A A AG+ +DA +LIN ARV+ + + ++P+
Sbjct: 63 IASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPV 103
>gi|201066706|gb|ACH92666.1| 20S proteasome subunit alpha 5 [Leishmania donovani]
Length = 244
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDY-----------MG-------CLVGENNVTSKLLQTSTSAEK 46
YDR FSPEGR++Q++Y +G L E V S L+ S S K
Sbjct: 8 YDRGVNTFSPEGRIFQIEYAVEAIKLGSTSLGIRTPEGVVLAAEKRVPSTLVVPS-SMSK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +ID H+A ++G+++DA IL+ ARV+++ + + Y EP+
Sbjct: 67 IMEIDSHIATVMSGMVADARILVEHARVESQNHRFTYNEPM 107
>gi|444318633|ref|XP_004179974.1| hypothetical protein TBLA_0C06620 [Tetrapisispora blattae CBS 6284]
gi|387513015|emb|CCH60455.1| hypothetical protein TBLA_0C06620 [Tetrapisispora blattae CBS 6284]
Length = 262
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 19/101 (18%)
Query: 5 YDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAEK 46
YDR + FSPEGRL+QV+Y G ++G E TS+LL+ S S EK
Sbjct: 8 YDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGISTSEGVVLGVEKRATSRLLE-SDSIEK 66
Query: 47 MYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPI 87
+ +I+ H+ CA++G+ +DA +I AR A + Y E I
Sbjct: 67 IVEIEKHIGCAMSGLTADARSMIEHARTSAVTHNLYYDEDI 107
>gi|366992626|ref|XP_003676078.1| hypothetical protein NCAS_0D01340 [Naumovozyma castellii CBS 4309]
gi|342301944|emb|CCC69715.1| hypothetical protein NCAS_0D01340 [Naumovozyma castellii CBS 4309]
Length = 261
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 62/120 (51%), Gaps = 22/120 (18%)
Query: 4 RYDRQTTVFSPEGRLYQVDYM-----------------GCLVG-ENNVTSKLLQTSTSAE 45
YDR + FSPEGRL+QV+Y G ++G E TS LL+ + S E
Sbjct: 7 EYDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGISTSEGVVLGVEKRATSPLLE-ADSIE 65
Query: 46 KMYKIDDHVACAVAGIMSDANILINTARVQARRYAYAYQEPIQDYKDDMTRQEAVQLALK 105
K+ +I+ H+ CA++G+ +DA +I ARV A + Y E D K + Q LAL+
Sbjct: 66 KIVEIEHHIGCAMSGLTADARSMIEHARVAAVNHNLYYDE---DIKVESLTQSVCDLALR 122
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.129 0.353
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,142,048,527
Number of Sequences: 23463169
Number of extensions: 70691185
Number of successful extensions: 196157
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2619
Number of HSP's successfully gapped in prelim test: 802
Number of HSP's that attempted gapping in prelim test: 189849
Number of HSP's gapped (non-prelim): 4298
length of query: 161
length of database: 8,064,228,071
effective HSP length: 123
effective length of query: 38
effective length of database: 9,473,225,580
effective search space: 359982572040
effective search space used: 359982572040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)